-- dump date   	20240514_072207
-- class       	Genbank::Feature
-- table       	feature
-- table       	main
-- field 1	id
-- field 2	type
-- field 3	name
-- field 4	contig
-- field 5	start_pos
-- field 6	end_pos
-- field 7	strand
-- field 8	description
-- field 9	chrom_position
-- field 10	organism
-- field 11	GeneID
-- header
-- id	type	name	contig	start_pos	end_pos	strand	description	chrom_position	organism	GeneID
1257118000001	SEQ_END	SEQ_END	NW_004457733.1	49911	49911	DR	NW_004457733.1; contig end	49911..49911	Acanthamoeba castellanii str. Neff	<NA>
1257118000002	SEQ_END	SEQ_END	NW_004457732.1	69800	69800	DR	NW_004457732.1; contig end	69800..69800	Acanthamoeba castellanii str. Neff	<NA>
1257118000003	SEQ_END	SEQ_END	NW_004457731.1	20085	20085	DR	NW_004457731.1; contig end	20085..20085	Acanthamoeba castellanii str. Neff	<NA>
1257118000004	SEQ_END	SEQ_END	NW_004457730.1	103257	103257	DR	NW_004457730.1; contig end	103257..103257	Acanthamoeba castellanii str. Neff	<NA>
1257118000005	SEQ_END	SEQ_END	NW_004457727.1	12789	12789	DR	NW_004457727.1; contig end	12789..12789	Acanthamoeba castellanii str. Neff	<NA>
1257118000006	SEQ_END	SEQ_END	NW_004457725.1	23223	23223	DR	NW_004457725.1; contig end	23223..23223	Acanthamoeba castellanii str. Neff	<NA>
1257118000007	SEQ_END	SEQ_END	NW_004457724.1	84557	84557	DR	NW_004457724.1; contig end	84557..84557	Acanthamoeba castellanii str. Neff	<NA>
1257118000008	SEQ_END	SEQ_END	NW_004457722.1	47175	47175	DR	NW_004457722.1; contig end	47175..47175	Acanthamoeba castellanii str. Neff	<NA>
1257118000009	SEQ_END	SEQ_END	NW_004457721.1	16978	16978	DR	NW_004457721.1; contig end	16978..16978	Acanthamoeba castellanii str. Neff	<NA>
1257118000010	SEQ_END	SEQ_END	NW_004457720.1	15877	15877	DR	NW_004457720.1; contig end	15877..15877	Acanthamoeba castellanii str. Neff	<NA>
1257118000011	SEQ_END	SEQ_END	NW_004457719.1	35113	35113	DR	NW_004457719.1; contig end	35113..35113	Acanthamoeba castellanii str. Neff	<NA>
1257118000012	SEQ_END	SEQ_END	NW_004457717.1	23609	23609	DR	NW_004457717.1; contig end	23609..23609	Acanthamoeba castellanii str. Neff	<NA>
1257118000013	SEQ_END	SEQ_END	NW_004457716.1	11513	11513	DR	NW_004457716.1; contig end	11513..11513	Acanthamoeba castellanii str. Neff	<NA>
1257118000014	SEQ_END	SEQ_END	NW_004457714.1	19640	19640	DR	NW_004457714.1; contig end	19640..19640	Acanthamoeba castellanii str. Neff	<NA>
1257118000015	SEQ_END	SEQ_END	NW_004457712.1	1454750	1454750	DR	NW_004457712.1; contig end	1454750..1454750	Acanthamoeba castellanii str. Neff	<NA>
1257118000016	SEQ_END	SEQ_END	NW_004457710.1	155160	155160	DR	NW_004457710.1; contig end	155160..155160	Acanthamoeba castellanii str. Neff	<NA>
1257118000017	SEQ_END	SEQ_END	NW_004457709.1	39289	39289	DR	NW_004457709.1; contig end	39289..39289	Acanthamoeba castellanii str. Neff	<NA>
1257118000018	SEQ_END	SEQ_END	NW_004457707.1	56795	56795	DR	NW_004457707.1; contig end	56795..56795	Acanthamoeba castellanii str. Neff	<NA>
1257118000019	SEQ_END	SEQ_END	NW_004457705.1	31976	31976	DR	NW_004457705.1; contig end	31976..31976	Acanthamoeba castellanii str. Neff	<NA>
1257118000020	SEQ_END	SEQ_END	NW_004457704.1	20940	20940	DR	NW_004457704.1; contig end	20940..20940	Acanthamoeba castellanii str. Neff	<NA>
1257118000021	SEQ_END	SEQ_END	NW_004457702.1	1155352	1155352	DR	NW_004457702.1; contig end	1155352..1155352	Acanthamoeba castellanii str. Neff	<NA>
1257118000022	SEQ_END	SEQ_END	NW_004457701.1	10096	10096	DR	NW_004457701.1; contig end	10096..10096	Acanthamoeba castellanii str. Neff	<NA>
1257118000023	SEQ_END	SEQ_END	NW_004457700.1	67856	67856	DR	NW_004457700.1; contig end	67856..67856	Acanthamoeba castellanii str. Neff	<NA>
1257118000024	SEQ_END	SEQ_END	NW_004457739.1	15221	15221	DR	NW_004457739.1; contig end	15221..15221	Acanthamoeba castellanii str. Neff	<NA>
1257118000025	SEQ_END	SEQ_END	NW_004457699.1	24212	24212	DR	NW_004457699.1; contig end	24212..24212	Acanthamoeba castellanii str. Neff	<NA>
1257118000026	SEQ_END	SEQ_END	NW_004457698.1	15008	15008	DR	NW_004457698.1; contig end	15008..15008	Acanthamoeba castellanii str. Neff	<NA>
1257118000027	SEQ_END	SEQ_END	NW_004457697.1	83080	83080	DR	NW_004457697.1; contig end	83080..83080	Acanthamoeba castellanii str. Neff	<NA>
1257118000028	SEQ_END	SEQ_END	NW_004457696.1	23990	23990	DR	NW_004457696.1; contig end	23990..23990	Acanthamoeba castellanii str. Neff	<NA>
1257118000029	SEQ_END	SEQ_END	NW_004457693.1	66808	66808	DR	NW_004457693.1; contig end	66808..66808	Acanthamoeba castellanii str. Neff	<NA>
1257118000030	SEQ_END	SEQ_END	NW_004457692.1	19875	19875	DR	NW_004457692.1; contig end	19875..19875	Acanthamoeba castellanii str. Neff	<NA>
1257118000031	SEQ_END	SEQ_END	NW_004457691.1	14070	14070	DR	NW_004457691.1; contig end	14070..14070	Acanthamoeba castellanii str. Neff	<NA>
1257118000032	SEQ_END	SEQ_END	NW_004457689.1	46717	46717	DR	NW_004457689.1; contig end	46717..46717	Acanthamoeba castellanii str. Neff	<NA>
1257118000033	SEQ_END	SEQ_END	NW_004457688.1	25874	25874	DR	NW_004457688.1; contig end	25874..25874	Acanthamoeba castellanii str. Neff	<NA>
1257118000034	SEQ_END	SEQ_END	NW_004457687.1	11787	11787	DR	NW_004457687.1; contig end	11787..11787	Acanthamoeba castellanii str. Neff	<NA>
1257118000035	SEQ_END	SEQ_END	NW_004457686.1	11777	11777	DR	NW_004457686.1; contig end	11777..11777	Acanthamoeba castellanii str. Neff	<NA>
1257118000036	SEQ_END	SEQ_END	NW_004457685.1	42590	42590	DR	NW_004457685.1; contig end	42590..42590	Acanthamoeba castellanii str. Neff	<NA>
1257118000037	SEQ_END	SEQ_END	NW_004457684.1	13497	13497	DR	NW_004457684.1; contig end	13497..13497	Acanthamoeba castellanii str. Neff	<NA>
1257118000038	SEQ_END	SEQ_END	NW_004457683.1	14864	14864	DR	NW_004457683.1; contig end	14864..14864	Acanthamoeba castellanii str. Neff	<NA>
1257118000039	SEQ_END	SEQ_END	NW_004457682.1	14234	14234	DR	NW_004457682.1; contig end	14234..14234	Acanthamoeba castellanii str. Neff	<NA>
1257118000040	SEQ_END	SEQ_END	NW_004457681.1	125879	125879	DR	NW_004457681.1; contig end	125879..125879	Acanthamoeba castellanii str. Neff	<NA>
1257118000041	SEQ_END	SEQ_END	NW_004457680.1	62712	62712	DR	NW_004457680.1; contig end	62712..62712	Acanthamoeba castellanii str. Neff	<NA>
1257118000042	SEQ_END	SEQ_END	NW_004457679.1	13116	13116	DR	NW_004457679.1; contig end	13116..13116	Acanthamoeba castellanii str. Neff	<NA>
1257118000043	SEQ_END	SEQ_END	NW_004457678.1	20813	20813	DR	NW_004457678.1; contig end	20813..20813	Acanthamoeba castellanii str. Neff	<NA>
1257118000044	SEQ_END	SEQ_END	NW_004457677.1	107323	107323	DR	NW_004457677.1; contig end	107323..107323	Acanthamoeba castellanii str. Neff	<NA>
1257118000045	SEQ_END	SEQ_END	NW_004457676.1	119477	119477	DR	NW_004457676.1; contig end	119477..119477	Acanthamoeba castellanii str. Neff	<NA>
1257118000046	SEQ_END	SEQ_END	NW_004457675.1	202951	202951	DR	NW_004457675.1; contig end	202951..202951	Acanthamoeba castellanii str. Neff	<NA>
1257118000047	SEQ_END	SEQ_END	NW_004457674.1	176782	176782	DR	NW_004457674.1; contig end	176782..176782	Acanthamoeba castellanii str. Neff	<NA>
1257118000048	SEQ_END	SEQ_END	NW_004457673.1	40861	40861	DR	NW_004457673.1; contig end	40861..40861	Acanthamoeba castellanii str. Neff	<NA>
1257118000049	SEQ_END	SEQ_END	NW_004457672.1	21533	21533	DR	NW_004457672.1; contig end	21533..21533	Acanthamoeba castellanii str. Neff	<NA>
1257118000050	SEQ_END	SEQ_END	NW_004457671.1	256284	256284	DR	NW_004457671.1; contig end	256284..256284	Acanthamoeba castellanii str. Neff	<NA>
1257118000051	SEQ_END	SEQ_END	NW_004457670.1	25844	25844	DR	NW_004457670.1; contig end	25844..25844	Acanthamoeba castellanii str. Neff	<NA>
1257118000052	SEQ_END	SEQ_END	NW_004457669.1	192567	192567	DR	NW_004457669.1; contig end	192567..192567	Acanthamoeba castellanii str. Neff	<NA>
1257118000053	SEQ_END	SEQ_END	NW_004457668.1	82402	82402	DR	NW_004457668.1; contig end	82402..82402	Acanthamoeba castellanii str. Neff	<NA>
1257118000054	SEQ_END	SEQ_END	NW_004457667.1	20147	20147	DR	NW_004457667.1; contig end	20147..20147	Acanthamoeba castellanii str. Neff	<NA>
1257118000055	SEQ_END	SEQ_END	NW_004457666.1	37595	37595	DR	NW_004457666.1; contig end	37595..37595	Acanthamoeba castellanii str. Neff	<NA>
1257118000056	SEQ_END	SEQ_END	NW_004457665.1	31558	31558	DR	NW_004457665.1; contig end	31558..31558	Acanthamoeba castellanii str. Neff	<NA>
1257118000057	SEQ_END	SEQ_END	NW_004457664.1	16726	16726	DR	NW_004457664.1; contig end	16726..16726	Acanthamoeba castellanii str. Neff	<NA>
1257118000058	SEQ_END	SEQ_END	NW_004457663.1	10758	10758	DR	NW_004457663.1; contig end	10758..10758	Acanthamoeba castellanii str. Neff	<NA>
1257118000059	SEQ_END	SEQ_END	NW_004457662.1	15418	15418	DR	NW_004457662.1; contig end	15418..15418	Acanthamoeba castellanii str. Neff	<NA>
1257118000060	SEQ_END	SEQ_END	NW_004457661.1	41947	41947	DR	NW_004457661.1; contig end	41947..41947	Acanthamoeba castellanii str. Neff	<NA>
1257118000061	SEQ_END	SEQ_END	NW_004457660.1	27513	27513	DR	NW_004457660.1; contig end	27513..27513	Acanthamoeba castellanii str. Neff	<NA>
1257118000062	SEQ_END	SEQ_END	NW_004457659.1	13811	13811	DR	NW_004457659.1; contig end	13811..13811	Acanthamoeba castellanii str. Neff	<NA>
1257118000063	SEQ_END	SEQ_END	NW_004457658.1	28457	28457	DR	NW_004457658.1; contig end	28457..28457	Acanthamoeba castellanii str. Neff	<NA>
1257118000064	SEQ_END	SEQ_END	NW_004457657.1	91281	91281	DR	NW_004457657.1; contig end	91281..91281	Acanthamoeba castellanii str. Neff	<NA>
1257118000065	SEQ_END	SEQ_END	NW_004457656.1	30075	30075	DR	NW_004457656.1; contig end	30075..30075	Acanthamoeba castellanii str. Neff	<NA>
1257118000066	SEQ_END	SEQ_END	NW_004457655.1	10722	10722	DR	NW_004457655.1; contig end	10722..10722	Acanthamoeba castellanii str. Neff	<NA>
1257118000067	SEQ_END	SEQ_END	NW_004457654.1	1500027	1500027	DR	NW_004457654.1; contig end	1500027..1500027	Acanthamoeba castellanii str. Neff	<NA>
1257118000068	SEQ_END	SEQ_END	NW_004457653.1	19852	19852	DR	NW_004457653.1; contig end	19852..19852	Acanthamoeba castellanii str. Neff	<NA>
1257118000069	SEQ_END	SEQ_END	NW_004457652.1	36279	36279	DR	NW_004457652.1; contig end	36279..36279	Acanthamoeba castellanii str. Neff	<NA>
1257118000070	SEQ_END	SEQ_END	NW_004457651.1	57740	57740	DR	NW_004457651.1; contig end	57740..57740	Acanthamoeba castellanii str. Neff	<NA>
1257118000071	SEQ_END	SEQ_END	NW_004457650.1	48442	48442	DR	NW_004457650.1; contig end	48442..48442	Acanthamoeba castellanii str. Neff	<NA>
1257118000072	SEQ_END	SEQ_END	NW_004457649.1	26135	26135	DR	NW_004457649.1; contig end	26135..26135	Acanthamoeba castellanii str. Neff	<NA>
1257118000073	SEQ_END	SEQ_END	NW_004457648.1	10358	10358	DR	NW_004457648.1; contig end	10358..10358	Acanthamoeba castellanii str. Neff	<NA>
1257118000074	SEQ_END	SEQ_END	NW_004457647.1	13435	13435	DR	NW_004457647.1; contig end	13435..13435	Acanthamoeba castellanii str. Neff	<NA>
1257118000075	SEQ_END	SEQ_END	NW_004457646.1	14157	14157	DR	NW_004457646.1; contig end	14157..14157	Acanthamoeba castellanii str. Neff	<NA>
1257118000076	SEQ_END	SEQ_END	NW_004457645.1	17551	17551	DR	NW_004457645.1; contig end	17551..17551	Acanthamoeba castellanii str. Neff	<NA>
1257118000077	SEQ_END	SEQ_END	NW_004457643.1	297986	297986	DR	NW_004457643.1; contig end	297986..297986	Acanthamoeba castellanii str. Neff	<NA>
1257118000078	SEQ_END	SEQ_END	NW_004457641.1	169001	169001	DR	NW_004457641.1; contig end	169001..169001	Acanthamoeba castellanii str. Neff	<NA>
1257118000079	SEQ_END	SEQ_END	NW_004457640.1	284582	284582	DR	NW_004457640.1; contig end	284582..284582	Acanthamoeba castellanii str. Neff	<NA>
1257118000080	SEQ_END	SEQ_END	NW_004457638.1	287452	287452	DR	NW_004457638.1; contig end	287452..287452	Acanthamoeba castellanii str. Neff	<NA>
1257118000081	SEQ_END	SEQ_END	NW_004457636.1	17163	17163	DR	NW_004457636.1; contig end	17163..17163	Acanthamoeba castellanii str. Neff	<NA>
1257118000082	SEQ_END	SEQ_END	NW_004457634.1	11662	11662	DR	NW_004457634.1; contig end	11662..11662	Acanthamoeba castellanii str. Neff	<NA>
1257118000083	SEQ_END	SEQ_END	NW_004457633.1	10326	10326	DR	NW_004457633.1; contig end	10326..10326	Acanthamoeba castellanii str. Neff	<NA>
1257118000084	SEQ_END	SEQ_END	NW_004457632.1	160410	160410	DR	NW_004457632.1; contig end	160410..160410	Acanthamoeba castellanii str. Neff	<NA>
1257118000085	SEQ_END	SEQ_END	NW_004457631.1	57584	57584	DR	NW_004457631.1; contig end	57584..57584	Acanthamoeba castellanii str. Neff	<NA>
1257118000086	SEQ_END	SEQ_END	NW_004457630.1	10650	10650	DR	NW_004457630.1; contig end	10650..10650	Acanthamoeba castellanii str. Neff	<NA>
1257118000087	SEQ_END	SEQ_END	NW_004457629.1	13044	13044	DR	NW_004457629.1; contig end	13044..13044	Acanthamoeba castellanii str. Neff	<NA>
1257118000088	SEQ_END	SEQ_END	NW_004457628.1	29809	29809	DR	NW_004457628.1; contig end	29809..29809	Acanthamoeba castellanii str. Neff	<NA>
1257118000089	SEQ_END	SEQ_END	NW_004457626.1	96988	96988	DR	NW_004457626.1; contig end	96988..96988	Acanthamoeba castellanii str. Neff	<NA>
1257118000090	SEQ_END	SEQ_END	NW_004457625.1	43047	43047	DR	NW_004457625.1; contig end	43047..43047	Acanthamoeba castellanii str. Neff	<NA>
1257118000091	SEQ_END	SEQ_END	NW_004457738.1	23137	23137	DR	NW_004457738.1; contig end	23137..23137	Acanthamoeba castellanii str. Neff	<NA>
1257118000092	SEQ_END	SEQ_END	NW_004457623.1	17103	17103	DR	NW_004457623.1; contig end	17103..17103	Acanthamoeba castellanii str. Neff	<NA>
1257118000093	SEQ_END	SEQ_END	NW_004457620.1	250536	250536	DR	NW_004457620.1; contig end	250536..250536	Acanthamoeba castellanii str. Neff	<NA>
1257118000094	SEQ_END	SEQ_END	NW_004457619.1	63649	63649	DR	NW_004457619.1; contig end	63649..63649	Acanthamoeba castellanii str. Neff	<NA>
1257118000095	SEQ_END	SEQ_END	NW_004457618.1	588424	588424	DR	NW_004457618.1; contig end	588424..588424	Acanthamoeba castellanii str. Neff	<NA>
1257118000096	SEQ_END	SEQ_END	NW_004457617.1	115998	115998	DR	NW_004457617.1; contig end	115998..115998	Acanthamoeba castellanii str. Neff	<NA>
1257118000097	SEQ_END	SEQ_END	NW_004457616.1	90035	90035	DR	NW_004457616.1; contig end	90035..90035	Acanthamoeba castellanii str. Neff	<NA>
1257118000098	SEQ_END	SEQ_END	NW_004457614.1	14587	14587	DR	NW_004457614.1; contig end	14587..14587	Acanthamoeba castellanii str. Neff	<NA>
1257118000099	SEQ_END	SEQ_END	NW_004457613.1	28402	28402	DR	NW_004457613.1; contig end	28402..28402	Acanthamoeba castellanii str. Neff	<NA>
1257118000100	SEQ_END	SEQ_END	NW_004457611.1	432401	432401	DR	NW_004457611.1; contig end	432401..432401	Acanthamoeba castellanii str. Neff	<NA>
1257118000101	SEQ_END	SEQ_END	NW_004457610.1	67705	67705	DR	NW_004457610.1; contig end	67705..67705	Acanthamoeba castellanii str. Neff	<NA>
1257118000102	SEQ_END	SEQ_END	NW_004457608.1	41496	41496	DR	NW_004457608.1; contig end	41496..41496	Acanthamoeba castellanii str. Neff	<NA>
1257118000103	SEQ_END	SEQ_END	NW_004457607.1	10657	10657	DR	NW_004457607.1; contig end	10657..10657	Acanthamoeba castellanii str. Neff	<NA>
1257118000104	SEQ_END	SEQ_END	NW_004457606.1	192034	192034	DR	NW_004457606.1; contig end	192034..192034	Acanthamoeba castellanii str. Neff	<NA>
1257118000105	SEQ_END	SEQ_END	NW_004457604.1	33598	33598	DR	NW_004457604.1; contig end	33598..33598	Acanthamoeba castellanii str. Neff	<NA>
1257118000106	SEQ_END	SEQ_END	NW_004457603.1	17462	17462	DR	NW_004457603.1; contig end	17462..17462	Acanthamoeba castellanii str. Neff	<NA>
1257118000107	SEQ_END	SEQ_END	NW_004457602.1	11799	11799	DR	NW_004457602.1; contig end	11799..11799	Acanthamoeba castellanii str. Neff	<NA>
1257118000108	SEQ_END	SEQ_END	NW_004457601.1	10708	10708	DR	NW_004457601.1; contig end	10708..10708	Acanthamoeba castellanii str. Neff	<NA>
1257118000109	SEQ_END	SEQ_END	NW_004457599.1	31096	31096	DR	NW_004457599.1; contig end	31096..31096	Acanthamoeba castellanii str. Neff	<NA>
1257118000110	SEQ_END	SEQ_END	NW_004457598.1	385054	385054	DR	NW_004457598.1; contig end	385054..385054	Acanthamoeba castellanii str. Neff	<NA>
1257118000111	SEQ_END	SEQ_END	NW_004457596.1	454467	454467	DR	NW_004457596.1; contig end	454467..454467	Acanthamoeba castellanii str. Neff	<NA>
1257118000112	SEQ_END	SEQ_END	NW_004457595.1	29153	29153	DR	NW_004457595.1; contig end	29153..29153	Acanthamoeba castellanii str. Neff	<NA>
1257118000113	SEQ_END	SEQ_END	NW_004457594.1	18118	18118	DR	NW_004457594.1; contig end	18118..18118	Acanthamoeba castellanii str. Neff	<NA>
1257118000114	SEQ_END	SEQ_END	NW_004457592.1	658721	658721	DR	NW_004457592.1; contig end	658721..658721	Acanthamoeba castellanii str. Neff	<NA>
1257118000115	SEQ_END	SEQ_END	NW_004457591.1	33598	33598	DR	NW_004457591.1; contig end	33598..33598	Acanthamoeba castellanii str. Neff	<NA>
1257118000116	SEQ_END	SEQ_END	NW_004457589.1	26428	26428	DR	NW_004457589.1; contig end	26428..26428	Acanthamoeba castellanii str. Neff	<NA>
1257118000117	SEQ_END	SEQ_END	NW_004457588.1	43703	43703	DR	NW_004457588.1; contig end	43703..43703	Acanthamoeba castellanii str. Neff	<NA>
1257118000118	SEQ_END	SEQ_END	NW_004457586.1	1085230	1085230	DR	NW_004457586.1; contig end	1085230..1085230	Acanthamoeba castellanii str. Neff	<NA>
1257118000119	SEQ_END	SEQ_END	NW_004457584.1	798317	798317	DR	NW_004457584.1; contig end	798317..798317	Acanthamoeba castellanii str. Neff	<NA>
1257118000120	SEQ_END	SEQ_END	NW_004457582.1	104261	104261	DR	NW_004457582.1; contig end	104261..104261	Acanthamoeba castellanii str. Neff	<NA>
1257118000121	SEQ_END	SEQ_END	NW_004457581.1	11673	11673	DR	NW_004457581.1; contig end	11673..11673	Acanthamoeba castellanii str. Neff	<NA>
1257118000122	SEQ_END	SEQ_END	NW_004457579.1	30551	30551	DR	NW_004457579.1; contig end	30551..30551	Acanthamoeba castellanii str. Neff	<NA>
1257118000123	SEQ_END	SEQ_END	NW_004457578.1	16923	16923	DR	NW_004457578.1; contig end	16923..16923	Acanthamoeba castellanii str. Neff	<NA>
1257118000124	SEQ_END	SEQ_END	NW_004457577.1	14564	14564	DR	NW_004457577.1; contig end	14564..14564	Acanthamoeba castellanii str. Neff	<NA>
1257118000125	SEQ_END	SEQ_END	NW_004457575.1	10133	10133	DR	NW_004457575.1; contig end	10133..10133	Acanthamoeba castellanii str. Neff	<NA>
1257118000126	SEQ_END	SEQ_END	NW_004457574.1	81351	81351	DR	NW_004457574.1; contig end	81351..81351	Acanthamoeba castellanii str. Neff	<NA>
1257118000127	SEQ_END	SEQ_END	NW_004457573.1	92876	92876	DR	NW_004457573.1; contig end	92876..92876	Acanthamoeba castellanii str. Neff	<NA>
1257118000128	SEQ_END	SEQ_END	NW_004457572.1	16545	16545	DR	NW_004457572.1; contig end	16545..16545	Acanthamoeba castellanii str. Neff	<NA>
1257118000129	SEQ_END	SEQ_END	NW_004457570.1	32623	32623	DR	NW_004457570.1; contig end	32623..32623	Acanthamoeba castellanii str. Neff	<NA>
1257118000130	SEQ_END	SEQ_END	NW_004457568.1	228114	228114	DR	NW_004457568.1; contig end	228114..228114	Acanthamoeba castellanii str. Neff	<NA>
1257118000131	SEQ_END	SEQ_END	NW_004457567.1	13791	13791	DR	NW_004457567.1; contig end	13791..13791	Acanthamoeba castellanii str. Neff	<NA>
1257118000132	SEQ_END	SEQ_END	NW_004457565.1	34936	34936	DR	NW_004457565.1; contig end	34936..34936	Acanthamoeba castellanii str. Neff	<NA>
1257118000133	SEQ_END	SEQ_END	NW_004457563.1	42965	42965	DR	NW_004457563.1; contig end	42965..42965	Acanthamoeba castellanii str. Neff	<NA>
1257118000134	SEQ_END	SEQ_END	NW_004457561.1	16923	16923	DR	NW_004457561.1; contig end	16923..16923	Acanthamoeba castellanii str. Neff	<NA>
1257118000135	SEQ_END	SEQ_END	NW_004457559.1	30688	30688	DR	NW_004457559.1; contig end	30688..30688	Acanthamoeba castellanii str. Neff	<NA>
1257118000136	SEQ_END	SEQ_END	NW_004457554.1	985549	985549	DR	NW_004457554.1; contig end	985549..985549	Acanthamoeba castellanii str. Neff	<NA>
1257118000137	SEQ_END	SEQ_END	NW_004457552.1	11456	11456	DR	NW_004457552.1; contig end	11456..11456	Acanthamoeba castellanii str. Neff	<NA>
1257118000138	SEQ_END	SEQ_END	NW_004457549.1	112628	112628	DR	NW_004457549.1; contig end	112628..112628	Acanthamoeba castellanii str. Neff	<NA>
1257118000139	SEQ_END	SEQ_END	NW_004457547.1	10499	10499	DR	NW_004457547.1; contig end	10499..10499	Acanthamoeba castellanii str. Neff	<NA>
1257118000140	SEQ_END	SEQ_END	NW_004457545.1	102307	102307	DR	NW_004457545.1; contig end	102307..102307	Acanthamoeba castellanii str. Neff	<NA>
1257118000141	SEQ_END	SEQ_END	NW_004457542.1	24306	24306	DR	NW_004457542.1; contig end	24306..24306	Acanthamoeba castellanii str. Neff	<NA>
1257118000142	SEQ_END	SEQ_END	NW_004457538.1	614167	614167	DR	NW_004457538.1; contig end	614167..614167	Acanthamoeba castellanii str. Neff	<NA>
1257118000143	SEQ_END	SEQ_END	NW_004457532.1	1176948	1176948	DR	NW_004457532.1; contig end	1176948..1176948	Acanthamoeba castellanii str. Neff	<NA>
1257118000144	SEQ_END	SEQ_END	NW_004457530.1	54332	54332	DR	NW_004457530.1; contig end	54332..54332	Acanthamoeba castellanii str. Neff	<NA>
1257118000145	SEQ_END	SEQ_END	NW_004457528.1	11328	11328	DR	NW_004457528.1; contig end	11328..11328	Acanthamoeba castellanii str. Neff	<NA>
1257118000146	SEQ_END	SEQ_END	NW_004457526.1	78707	78707	DR	NW_004457526.1; contig end	78707..78707	Acanthamoeba castellanii str. Neff	<NA>
1257118000147	SEQ_END	SEQ_END	NW_004457524.1	12144	12144	DR	NW_004457524.1; contig end	12144..12144	Acanthamoeba castellanii str. Neff	<NA>
1257118000148	SEQ_END	SEQ_END	NW_004457522.1	44578	44578	DR	NW_004457522.1; contig end	44578..44578	Acanthamoeba castellanii str. Neff	<NA>
1257118000149	SEQ_END	SEQ_END	NW_004457518.1	517572	517572	DR	NW_004457518.1; contig end	517572..517572	Acanthamoeba castellanii str. Neff	<NA>
1257118000150	SEQ_END	SEQ_END	NW_004457516.1	104450	104450	DR	NW_004457516.1; contig end	104450..104450	Acanthamoeba castellanii str. Neff	<NA>
1257118000151	SEQ_END	SEQ_END	NW_004457514.1	83362	83362	DR	NW_004457514.1; contig end	83362..83362	Acanthamoeba castellanii str. Neff	<NA>
1257118000152	SEQ_END	SEQ_END	NW_004457511.1	123495	123495	DR	NW_004457511.1; contig end	123495..123495	Acanthamoeba castellanii str. Neff	<NA>
1257118000153	SEQ_END	SEQ_END	NW_004457509.1	16775	16775	DR	NW_004457509.1; contig end	16775..16775	Acanthamoeba castellanii str. Neff	<NA>
1257118000154	SEQ_END	SEQ_END	NW_004457507.1	19223	19223	DR	NW_004457507.1; contig end	19223..19223	Acanthamoeba castellanii str. Neff	<NA>
1257118000155	SEQ_END	SEQ_END	NW_004457505.1	15403	15403	DR	NW_004457505.1; contig end	15403..15403	Acanthamoeba castellanii str. Neff	<NA>
1257118000156	SEQ_END	SEQ_END	NW_004457503.1	117382	117382	DR	NW_004457503.1; contig end	117382..117382	Acanthamoeba castellanii str. Neff	<NA>
1257118000157	SEQ_END	SEQ_END	NW_004457501.1	26498	26498	DR	NW_004457501.1; contig end	26498..26498	Acanthamoeba castellanii str. Neff	<NA>
1257118000158	SEQ_END	SEQ_END	NW_004457498.1	207239	207239	DR	NW_004457498.1; contig end	207239..207239	Acanthamoeba castellanii str. Neff	<NA>
1257118000159	SEQ_END	SEQ_END	NW_004457496.1	46165	46165	DR	NW_004457496.1; contig end	46165..46165	Acanthamoeba castellanii str. Neff	<NA>
1257118000160	SEQ_END	SEQ_END	NW_004457493.1	14662	14662	DR	NW_004457493.1; contig end	14662..14662	Acanthamoeba castellanii str. Neff	<NA>
1257118000161	SEQ_END	SEQ_END	NW_004457490.1	250310	250310	DR	NW_004457490.1; contig end	250310..250310	Acanthamoeba castellanii str. Neff	<NA>
1257118000162	SEQ_END	SEQ_END	NW_004457486.1	193949	193949	DR	NW_004457486.1; contig end	193949..193949	Acanthamoeba castellanii str. Neff	<NA>
1257118000163	SEQ_END	SEQ_END	NW_004457484.1	28645	28645	DR	NW_004457484.1; contig end	28645..28645	Acanthamoeba castellanii str. Neff	<NA>
1257118000164	SEQ_END	SEQ_END	NW_004457482.1	20755	20755	DR	NW_004457482.1; contig end	20755..20755	Acanthamoeba castellanii str. Neff	<NA>
1257118000165	SEQ_END	SEQ_END	NW_004457480.1	16500	16500	DR	NW_004457480.1; contig end	16500..16500	Acanthamoeba castellanii str. Neff	<NA>
1257118000166	SEQ_END	SEQ_END	NW_004457477.1	169888	169888	DR	NW_004457477.1; contig end	169888..169888	Acanthamoeba castellanii str. Neff	<NA>
1257118000167	SEQ_END	SEQ_END	NW_004457475.1	27375	27375	DR	NW_004457475.1; contig end	27375..27375	Acanthamoeba castellanii str. Neff	<NA>
1257118000168	SEQ_END	SEQ_END	NW_004457473.1	20375	20375	DR	NW_004457473.1; contig end	20375..20375	Acanthamoeba castellanii str. Neff	<NA>
1257118000169	SEQ_END	SEQ_END	NW_004457471.1	18583	18583	DR	NW_004457471.1; contig end	18583..18583	Acanthamoeba castellanii str. Neff	<NA>
1257118000170	SEQ_END	SEQ_END	NW_004457466.1	644305	644305	DR	NW_004457466.1; contig end	644305..644305	Acanthamoeba castellanii str. Neff	<NA>
1257118000171	SEQ_END	SEQ_END	NW_004457464.1	102055	102055	DR	NW_004457464.1; contig end	102055..102055	Acanthamoeba castellanii str. Neff	<NA>
1257118000172	SEQ_END	SEQ_END	NW_004457462.1	30509	30509	DR	NW_004457462.1; contig end	30509..30509	Acanthamoeba castellanii str. Neff	<NA>
1257118000173	SEQ_END	SEQ_END	NW_004457460.1	29026	29026	DR	NW_004457460.1; contig end	29026..29026	Acanthamoeba castellanii str. Neff	<NA>
1257118000174	SEQ_END	SEQ_END	NW_004457458.1	10875	10875	DR	NW_004457458.1; contig end	10875..10875	Acanthamoeba castellanii str. Neff	<NA>
1257118000175	SEQ_END	SEQ_END	NW_004457456.1	14768	14768	DR	NW_004457456.1; contig end	14768..14768	Acanthamoeba castellanii str. Neff	<NA>
1257118000176	SEQ_END	SEQ_END	NW_004457453.1	364810	364810	DR	NW_004457453.1; contig end	364810..364810	Acanthamoeba castellanii str. Neff	<NA>
1257118000177	SEQ_END	SEQ_END	NW_004457451.1	11802	11802	DR	NW_004457451.1; contig end	11802..11802	Acanthamoeba castellanii str. Neff	<NA>
1257118000178	SEQ_END	SEQ_END	NW_004457449.1	16019	16019	DR	NW_004457449.1; contig end	16019..16019	Acanthamoeba castellanii str. Neff	<NA>
1257118000179	SEQ_END	SEQ_END	NW_004457447.1	22365	22365	DR	NW_004457447.1; contig end	22365..22365	Acanthamoeba castellanii str. Neff	<NA>
1257118000180	SEQ_END	SEQ_END	NW_004457446.1	11968	11968	DR	NW_004457446.1; contig end	11968..11968	Acanthamoeba castellanii str. Neff	<NA>
1257118000181	SEQ_END	SEQ_END	NW_004457445.1	180049	180049	DR	NW_004457445.1; contig end	180049..180049	Acanthamoeba castellanii str. Neff	<NA>
1257118000182	SEQ_END	SEQ_END	NW_004457444.1	10604	10604	DR	NW_004457444.1; contig end	10604..10604	Acanthamoeba castellanii str. Neff	<NA>
1257118000183	SEQ_END	SEQ_END	NW_004457443.1	20492	20492	DR	NW_004457443.1; contig end	20492..20492	Acanthamoeba castellanii str. Neff	<NA>
1257118000184	SEQ_END	SEQ_END	NW_004457442.1	2036344	2036344	DR	NW_004457442.1; contig end	2036344..2036344	Acanthamoeba castellanii str. Neff	<NA>
1257118000185	SEQ_END	SEQ_END	NW_004457441.1	104055	104055	DR	NW_004457441.1; contig end	104055..104055	Acanthamoeba castellanii str. Neff	<NA>
1257118000186	SEQ_END	SEQ_END	NW_004457440.1	20849	20849	DR	NW_004457440.1; contig end	20849..20849	Acanthamoeba castellanii str. Neff	<NA>
1257118000187	SEQ_END	SEQ_END	NW_004457439.1	13332	13332	DR	NW_004457439.1; contig end	13332..13332	Acanthamoeba castellanii str. Neff	<NA>
1257118000188	SEQ_END	SEQ_END	NW_004457438.1	36005	36005	DR	NW_004457438.1; contig end	36005..36005	Acanthamoeba castellanii str. Neff	<NA>
1257118000189	SEQ_END	SEQ_END	NW_004457437.1	125543	125543	DR	NW_004457437.1; contig end	125543..125543	Acanthamoeba castellanii str. Neff	<NA>
1257118000190	SEQ_END	SEQ_END	NW_004457436.1	22276	22276	DR	NW_004457436.1; contig end	22276..22276	Acanthamoeba castellanii str. Neff	<NA>
1257118000191	SEQ_END	SEQ_END	NW_004457435.1	204307	204307	DR	NW_004457435.1; contig end	204307..204307	Acanthamoeba castellanii str. Neff	<NA>
1257118000192	SEQ_END	SEQ_END	NW_004457434.1	285582	285582	DR	NW_004457434.1; contig end	285582..285582	Acanthamoeba castellanii str. Neff	<NA>
1257118000193	SEQ_END	SEQ_END	NW_004457433.1	14101	14101	DR	NW_004457433.1; contig end	14101..14101	Acanthamoeba castellanii str. Neff	<NA>
1257118000194	SEQ_END	SEQ_END	NW_004457432.1	13326	13326	DR	NW_004457432.1; contig end	13326..13326	Acanthamoeba castellanii str. Neff	<NA>
1257118000195	SEQ_END	SEQ_END	NW_004457431.1	504230	504230	DR	NW_004457431.1; contig end	504230..504230	Acanthamoeba castellanii str. Neff	<NA>
1257118000196	SEQ_END	SEQ_END	NW_004457430.1	53237	53237	DR	NW_004457430.1; contig end	53237..53237	Acanthamoeba castellanii str. Neff	<NA>
1257118000197	SEQ_END	SEQ_END	NW_004457429.1	90290	90290	DR	NW_004457429.1; contig end	90290..90290	Acanthamoeba castellanii str. Neff	<NA>
1257118000198	SEQ_END	SEQ_END	NW_004457428.1	13417	13417	DR	NW_004457428.1; contig end	13417..13417	Acanthamoeba castellanii str. Neff	<NA>
1257118000199	SEQ_END	SEQ_END	NW_004457427.1	39151	39151	DR	NW_004457427.1; contig end	39151..39151	Acanthamoeba castellanii str. Neff	<NA>
1257118000200	SEQ_END	SEQ_END	NW_004457426.1	10717	10717	DR	NW_004457426.1; contig end	10717..10717	Acanthamoeba castellanii str. Neff	<NA>
1257118000201	SEQ_END	SEQ_END	NW_004457425.1	13083	13083	DR	NW_004457425.1; contig end	13083..13083	Acanthamoeba castellanii str. Neff	<NA>
1257118000202	SEQ_END	SEQ_END	NW_004457424.1	47765	47765	DR	NW_004457424.1; contig end	47765..47765	Acanthamoeba castellanii str. Neff	<NA>
1257118000203	SEQ_END	SEQ_END	NW_004457423.1	16121	16121	DR	NW_004457423.1; contig end	16121..16121	Acanthamoeba castellanii str. Neff	<NA>
1257118000204	SEQ_END	SEQ_END	NW_004457422.1	51993	51993	DR	NW_004457422.1; contig end	51993..51993	Acanthamoeba castellanii str. Neff	<NA>
1257118000205	SEQ_END	SEQ_END	NW_004457421.1	36357	36357	DR	NW_004457421.1; contig end	36357..36357	Acanthamoeba castellanii str. Neff	<NA>
1257118000206	SEQ_END	SEQ_END	NW_004457420.1	17956	17956	DR	NW_004457420.1; contig end	17956..17956	Acanthamoeba castellanii str. Neff	<NA>
1257118000207	SEQ_END	SEQ_END	NW_004457419.1	13231	13231	DR	NW_004457419.1; contig end	13231..13231	Acanthamoeba castellanii str. Neff	<NA>
1257118000208	SEQ_END	SEQ_END	NW_004457418.1	38848	38848	DR	NW_004457418.1; contig end	38848..38848	Acanthamoeba castellanii str. Neff	<NA>
1257118000209	SEQ_END	SEQ_END	NW_004457417.1	43010	43010	DR	NW_004457417.1; contig end	43010..43010	Acanthamoeba castellanii str. Neff	<NA>
1257118000210	SEQ_END	SEQ_END	NW_004457416.1	76322	76322	DR	NW_004457416.1; contig end	76322..76322	Acanthamoeba castellanii str. Neff	<NA>
1257118000211	SEQ_END	SEQ_END	NW_004457415.1	344205	344205	DR	NW_004457415.1; contig end	344205..344205	Acanthamoeba castellanii str. Neff	<NA>
1257118000212	SEQ_END	SEQ_END	NW_004457414.1	31014	31014	DR	NW_004457414.1; contig end	31014..31014	Acanthamoeba castellanii str. Neff	<NA>
1257118000213	SEQ_END	SEQ_END	NW_004457413.1	41288	41288	DR	NW_004457413.1; contig end	41288..41288	Acanthamoeba castellanii str. Neff	<NA>
1257118000214	SEQ_END	SEQ_END	NW_004457412.1	16099	16099	DR	NW_004457412.1; contig end	16099..16099	Acanthamoeba castellanii str. Neff	<NA>
1257118000215	SEQ_END	SEQ_END	NW_004457411.1	13205	13205	DR	NW_004457411.1; contig end	13205..13205	Acanthamoeba castellanii str. Neff	<NA>
1257118000216	SEQ_END	SEQ_END	NW_004457410.1	337908	337908	DR	NW_004457410.1; contig end	337908..337908	Acanthamoeba castellanii str. Neff	<NA>
1257118000217	SEQ_END	SEQ_END	NW_004457409.1	11233	11233	DR	NW_004457409.1; contig end	11233..11233	Acanthamoeba castellanii str. Neff	<NA>
1257118000218	SEQ_END	SEQ_END	NW_004457408.1	18453	18453	DR	NW_004457408.1; contig end	18453..18453	Acanthamoeba castellanii str. Neff	<NA>
1257118000219	SEQ_END	SEQ_END	NW_004457407.1	24718	24718	DR	NW_004457407.1; contig end	24718..24718	Acanthamoeba castellanii str. Neff	<NA>
1257118000220	SEQ_END	SEQ_END	NW_004457406.1	296746	296746	DR	NW_004457406.1; contig end	296746..296746	Acanthamoeba castellanii str. Neff	<NA>
1257118000221	SEQ_END	SEQ_END	NW_004457405.1	26634	26634	DR	NW_004457405.1; contig end	26634..26634	Acanthamoeba castellanii str. Neff	<NA>
1257118000222	SEQ_END	SEQ_END	NW_004457404.1	14143	14143	DR	NW_004457404.1; contig end	14143..14143	Acanthamoeba castellanii str. Neff	<NA>
1257118000223	SEQ_END	SEQ_END	NW_004457403.1	21961	21961	DR	NW_004457403.1; contig end	21961..21961	Acanthamoeba castellanii str. Neff	<NA>
1257118000224	SEQ_END	SEQ_END	NW_004457402.1	46849	46849	DR	NW_004457402.1; contig end	46849..46849	Acanthamoeba castellanii str. Neff	<NA>
1257118000225	SEQ_END	SEQ_END	NW_004457401.1	28711	28711	DR	NW_004457401.1; contig end	28711..28711	Acanthamoeba castellanii str. Neff	<NA>
1257118000226	SEQ_END	SEQ_END	NW_004457400.1	15191	15191	DR	NW_004457400.1; contig end	15191..15191	Acanthamoeba castellanii str. Neff	<NA>
1257118000227	SEQ_END	SEQ_END	NW_004457399.1	15488	15488	DR	NW_004457399.1; contig end	15488..15488	Acanthamoeba castellanii str. Neff	<NA>
1257118000228	SEQ_END	SEQ_END	NW_004457398.1	34549	34549	DR	NW_004457398.1; contig end	34549..34549	Acanthamoeba castellanii str. Neff	<NA>
1257118000229	SEQ_END	SEQ_END	NW_004457397.1	13428	13428	DR	NW_004457397.1; contig end	13428..13428	Acanthamoeba castellanii str. Neff	<NA>
1257118000230	SEQ_END	SEQ_END	NW_004457396.1	226218	226218	DR	NW_004457396.1; contig end	226218..226218	Acanthamoeba castellanii str. Neff	<NA>
1257118000231	SEQ_END	SEQ_END	NW_004457395.1	13281	13281	DR	NW_004457395.1; contig end	13281..13281	Acanthamoeba castellanii str. Neff	<NA>
1257118000232	SEQ_END	SEQ_END	NW_004457394.1	167225	167225	DR	NW_004457394.1; contig end	167225..167225	Acanthamoeba castellanii str. Neff	<NA>
1257118000233	SEQ_END	SEQ_END	NW_004457393.1	13798	13798	DR	NW_004457393.1; contig end	13798..13798	Acanthamoeba castellanii str. Neff	<NA>
1257118000234	SEQ_END	SEQ_END	NW_004457392.1	14780	14780	DR	NW_004457392.1; contig end	14780..14780	Acanthamoeba castellanii str. Neff	<NA>
1257118000235	SEQ_END	SEQ_END	NW_004457391.1	382699	382699	DR	NW_004457391.1; contig end	382699..382699	Acanthamoeba castellanii str. Neff	<NA>
1257118000236	SEQ_END	SEQ_END	NW_004457390.1	322904	322904	DR	NW_004457390.1; contig end	322904..322904	Acanthamoeba castellanii str. Neff	<NA>
1257118000237	SEQ_END	SEQ_END	NW_004457389.1	41139	41139	DR	NW_004457389.1; contig end	41139..41139	Acanthamoeba castellanii str. Neff	<NA>
1257118000238	SEQ_END	SEQ_END	NW_004457388.1	10708	10708	DR	NW_004457388.1; contig end	10708..10708	Acanthamoeba castellanii str. Neff	<NA>
1257118000239	SEQ_END	SEQ_END	NW_004457387.1	13106	13106	DR	NW_004457387.1; contig end	13106..13106	Acanthamoeba castellanii str. Neff	<NA>
1257118000240	SEQ_END	SEQ_END	NW_004457386.1	64373	64373	DR	NW_004457386.1; contig end	64373..64373	Acanthamoeba castellanii str. Neff	<NA>
1257118000241	SEQ_END	SEQ_END	NW_004457385.1	14542	14542	DR	NW_004457385.1; contig end	14542..14542	Acanthamoeba castellanii str. Neff	<NA>
1257118000242	SEQ_END	SEQ_END	NW_004457384.1	254451	254451	DR	NW_004457384.1; contig end	254451..254451	Acanthamoeba castellanii str. Neff	<NA>
1257118000243	SEQ_END	SEQ_END	NW_004457383.1	42432	42432	DR	NW_004457383.1; contig end	42432..42432	Acanthamoeba castellanii str. Neff	<NA>
1257118000244	SEQ_END	SEQ_END	NW_004457382.1	35728	35728	DR	NW_004457382.1; contig end	35728..35728	Acanthamoeba castellanii str. Neff	<NA>
1257118000245	SEQ_END	SEQ_END	NW_004457381.1	29345	29345	DR	NW_004457381.1; contig end	29345..29345	Acanthamoeba castellanii str. Neff	<NA>
1257118000246	SEQ_END	SEQ_END	NW_004457380.1	1026499	1026499	DR	NW_004457380.1; contig end	1026499..1026499	Acanthamoeba castellanii str. Neff	<NA>
1257118000247	SEQ_END	SEQ_END	NW_004457379.1	11265	11265	DR	NW_004457379.1; contig end	11265..11265	Acanthamoeba castellanii str. Neff	<NA>
1257118000248	SEQ_END	SEQ_END	NW_004457378.1	14776	14776	DR	NW_004457378.1; contig end	14776..14776	Acanthamoeba castellanii str. Neff	<NA>
1257118000249	SEQ_END	SEQ_END	NW_004457377.1	42657	42657	DR	NW_004457377.1; contig end	42657..42657	Acanthamoeba castellanii str. Neff	<NA>
1257118000250	SEQ_END	SEQ_END	NW_004457376.1	97713	97713	DR	NW_004457376.1; contig end	97713..97713	Acanthamoeba castellanii str. Neff	<NA>
1257118000251	SEQ_END	SEQ_END	NW_004457375.1	55787	55787	DR	NW_004457375.1; contig end	55787..55787	Acanthamoeba castellanii str. Neff	<NA>
1257118000252	SEQ_END	SEQ_END	NW_004457374.1	28277	28277	DR	NW_004457374.1; contig end	28277..28277	Acanthamoeba castellanii str. Neff	<NA>
1257118000253	SEQ_END	SEQ_END	NW_004457373.1	164306	164306	DR	NW_004457373.1; contig end	164306..164306	Acanthamoeba castellanii str. Neff	<NA>
1257118000254	SEQ_END	SEQ_END	NW_004457372.1	301176	301176	DR	NW_004457372.1; contig end	301176..301176	Acanthamoeba castellanii str. Neff	<NA>
1257118000255	SEQ_END	SEQ_END	NW_004457371.1	22431	22431	DR	NW_004457371.1; contig end	22431..22431	Acanthamoeba castellanii str. Neff	<NA>
1257118000256	SEQ_END	SEQ_END	NW_004457370.1	19095	19095	DR	NW_004457370.1; contig end	19095..19095	Acanthamoeba castellanii str. Neff	<NA>
1257118000257	SEQ_END	SEQ_END	NW_004457369.1	83437	83437	DR	NW_004457369.1; contig end	83437..83437	Acanthamoeba castellanii str. Neff	<NA>
1257118000258	SEQ_END	SEQ_END	NW_004457368.1	102129	102129	DR	NW_004457368.1; contig end	102129..102129	Acanthamoeba castellanii str. Neff	<NA>
1257118000259	SEQ_END	SEQ_END	NW_004457367.1	104112	104112	DR	NW_004457367.1; contig end	104112..104112	Acanthamoeba castellanii str. Neff	<NA>
1257118000260	SEQ_END	SEQ_END	NW_004457366.1	31923	31923	DR	NW_004457366.1; contig end	31923..31923	Acanthamoeba castellanii str. Neff	<NA>
1257118000261	SEQ_END	SEQ_END	NW_004457365.1	96141	96141	DR	NW_004457365.1; contig end	96141..96141	Acanthamoeba castellanii str. Neff	<NA>
1257118000262	SEQ_END	SEQ_END	NW_004457364.1	257976	257976	DR	NW_004457364.1; contig end	257976..257976	Acanthamoeba castellanii str. Neff	<NA>
1257118000263	SEQ_END	SEQ_END	NW_004457363.1	210980	210980	DR	NW_004457363.1; contig end	210980..210980	Acanthamoeba castellanii str. Neff	<NA>
1257118000264	SEQ_END	SEQ_END	NW_004457362.1	26917	26917	DR	NW_004457362.1; contig end	26917..26917	Acanthamoeba castellanii str. Neff	<NA>
1257118000265	SEQ_END	SEQ_END	NW_004457361.1	14474	14474	DR	NW_004457361.1; contig end	14474..14474	Acanthamoeba castellanii str. Neff	<NA>
1257118000266	SEQ_END	SEQ_END	NW_004457360.1	15015	15015	DR	NW_004457360.1; contig end	15015..15015	Acanthamoeba castellanii str. Neff	<NA>
1257118000267	SEQ_END	SEQ_END	NW_004457359.1	37817	37817	DR	NW_004457359.1; contig end	37817..37817	Acanthamoeba castellanii str. Neff	<NA>
1257118000268	SEQ_END	SEQ_END	NW_004457358.1	27541	27541	DR	NW_004457358.1; contig end	27541..27541	Acanthamoeba castellanii str. Neff	<NA>
1257118000269	SEQ_END	SEQ_END	NW_004457357.1	19408	19408	DR	NW_004457357.1; contig end	19408..19408	Acanthamoeba castellanii str. Neff	<NA>
1257118000270	SEQ_END	SEQ_END	NW_004457356.1	244142	244142	DR	NW_004457356.1; contig end	244142..244142	Acanthamoeba castellanii str. Neff	<NA>
1257118000271	SEQ_END	SEQ_END	NW_004457355.1	12041	12041	DR	NW_004457355.1; contig end	12041..12041	Acanthamoeba castellanii str. Neff	<NA>
1257118000272	SEQ_END	SEQ_END	NW_004457354.1	11723	11723	DR	NW_004457354.1; contig end	11723..11723	Acanthamoeba castellanii str. Neff	<NA>
1257118000273	SEQ_END	SEQ_END	NW_004457353.1	12063	12063	DR	NW_004457353.1; contig end	12063..12063	Acanthamoeba castellanii str. Neff	<NA>
1257118000274	SEQ_END	SEQ_END	NW_004457352.1	39892	39892	DR	NW_004457352.1; contig end	39892..39892	Acanthamoeba castellanii str. Neff	<NA>
1257118000275	SEQ_END	SEQ_END	NW_004457351.1	10471	10471	DR	NW_004457351.1; contig end	10471..10471	Acanthamoeba castellanii str. Neff	<NA>
1257118000276	SEQ_END	SEQ_END	NW_004457350.1	117733	117733	DR	NW_004457350.1; contig end	117733..117733	Acanthamoeba castellanii str. Neff	<NA>
1257118000277	SEQ_END	SEQ_END	NW_004457349.1	13463	13463	DR	NW_004457349.1; contig end	13463..13463	Acanthamoeba castellanii str. Neff	<NA>
1257118000278	SEQ_END	SEQ_END	NW_004457348.1	13424	13424	DR	NW_004457348.1; contig end	13424..13424	Acanthamoeba castellanii str. Neff	<NA>
1257118000279	SEQ_END	SEQ_END	NW_004457347.1	13461	13461	DR	NW_004457347.1; contig end	13461..13461	Acanthamoeba castellanii str. Neff	<NA>
1257118000280	SEQ_END	SEQ_END	NW_004457346.1	172384	172384	DR	NW_004457346.1; contig end	172384..172384	Acanthamoeba castellanii str. Neff	<NA>
1257118000281	SEQ_END	SEQ_END	NW_004457345.1	24275	24275	DR	NW_004457345.1; contig end	24275..24275	Acanthamoeba castellanii str. Neff	<NA>
1257118000282	SEQ_END	SEQ_END	NW_004457344.1	37371	37371	DR	NW_004457344.1; contig end	37371..37371	Acanthamoeba castellanii str. Neff	<NA>
1257118000283	SEQ_END	SEQ_END	NW_004457343.1	639274	639274	DR	NW_004457343.1; contig end	639274..639274	Acanthamoeba castellanii str. Neff	<NA>
1257118000284	SEQ_END	SEQ_END	NW_004457342.1	294834	294834	DR	NW_004457342.1; contig end	294834..294834	Acanthamoeba castellanii str. Neff	<NA>
1257118000285	SEQ_END	SEQ_END	NW_004457341.1	12407	12407	DR	NW_004457341.1; contig end	12407..12407	Acanthamoeba castellanii str. Neff	<NA>
1257118000286	SEQ_END	SEQ_END	NW_004457340.1	10488	10488	DR	NW_004457340.1; contig end	10488..10488	Acanthamoeba castellanii str. Neff	<NA>
1257118000287	SEQ_END	SEQ_END	NW_004457339.1	15898	15898	DR	NW_004457339.1; contig end	15898..15898	Acanthamoeba castellanii str. Neff	<NA>
1257118000288	SEQ_END	SEQ_END	NW_004457338.1	12435	12435	DR	NW_004457338.1; contig end	12435..12435	Acanthamoeba castellanii str. Neff	<NA>
1257118000289	SEQ_END	SEQ_END	NW_004457337.1	21279	21279	DR	NW_004457337.1; contig end	21279..21279	Acanthamoeba castellanii str. Neff	<NA>
1257118000290	SEQ_END	SEQ_END	NW_004457336.1	14823	14823	DR	NW_004457336.1; contig end	14823..14823	Acanthamoeba castellanii str. Neff	<NA>
1257118000291	SEQ_END	SEQ_END	NW_004457335.1	18562	18562	DR	NW_004457335.1; contig end	18562..18562	Acanthamoeba castellanii str. Neff	<NA>
1257118000292	SEQ_END	SEQ_END	NW_004457334.1	16150	16150	DR	NW_004457334.1; contig end	16150..16150	Acanthamoeba castellanii str. Neff	<NA>
1257118000293	SEQ_END	SEQ_END	NW_004457333.1	29937	29937	DR	NW_004457333.1; contig end	29937..29937	Acanthamoeba castellanii str. Neff	<NA>
1257118000294	SEQ_END	SEQ_END	NW_004457332.1	30207	30207	DR	NW_004457332.1; contig end	30207..30207	Acanthamoeba castellanii str. Neff	<NA>
1257118000295	SEQ_END	SEQ_END	NW_004457331.1	18252	18252	DR	NW_004457331.1; contig end	18252..18252	Acanthamoeba castellanii str. Neff	<NA>
1257118000296	SEQ_END	SEQ_END	NW_004457330.1	56962	56962	DR	NW_004457330.1; contig end	56962..56962	Acanthamoeba castellanii str. Neff	<NA>
1257118000297	SEQ_END	SEQ_END	NW_004457329.1	186179	186179	DR	NW_004457329.1; contig end	186179..186179	Acanthamoeba castellanii str. Neff	<NA>
1257118000298	SEQ_END	SEQ_END	NW_004457328.1	29059	29059	DR	NW_004457328.1; contig end	29059..29059	Acanthamoeba castellanii str. Neff	<NA>
1257118000299	SEQ_END	SEQ_END	NW_004457327.1	21871	21871	DR	NW_004457327.1; contig end	21871..21871	Acanthamoeba castellanii str. Neff	<NA>
1257118000300	SEQ_END	SEQ_END	NW_004457326.1	71862	71862	DR	NW_004457326.1; contig end	71862..71862	Acanthamoeba castellanii str. Neff	<NA>
1257118000301	SEQ_END	SEQ_END	NW_004457325.1	15160	15160	DR	NW_004457325.1; contig end	15160..15160	Acanthamoeba castellanii str. Neff	<NA>
1257118000302	SEQ_END	SEQ_END	NW_004457324.1	22071	22071	DR	NW_004457324.1; contig end	22071..22071	Acanthamoeba castellanii str. Neff	<NA>
1257118000303	SEQ_END	SEQ_END	NW_004457323.1	728924	728924	DR	NW_004457323.1; contig end	728924..728924	Acanthamoeba castellanii str. Neff	<NA>
1257118000304	SEQ_END	SEQ_END	NW_004457322.1	23025	23025	DR	NW_004457322.1; contig end	23025..23025	Acanthamoeba castellanii str. Neff	<NA>
1257118000305	SEQ_END	SEQ_END	NW_004457321.1	93627	93627	DR	NW_004457321.1; contig end	93627..93627	Acanthamoeba castellanii str. Neff	<NA>
1257118000306	SEQ_END	SEQ_END	NW_004457320.1	44668	44668	DR	NW_004457320.1; contig end	44668..44668	Acanthamoeba castellanii str. Neff	<NA>
1257118000307	SEQ_END	SEQ_END	NW_004457319.1	149381	149381	DR	NW_004457319.1; contig end	149381..149381	Acanthamoeba castellanii str. Neff	<NA>
1257118000308	SEQ_END	SEQ_END	NW_004457318.1	12232	12232	DR	NW_004457318.1; contig end	12232..12232	Acanthamoeba castellanii str. Neff	<NA>
1257118000309	SEQ_END	SEQ_END	NW_004457317.1	34958	34958	DR	NW_004457317.1; contig end	34958..34958	Acanthamoeba castellanii str. Neff	<NA>
1257118000310	SEQ_END	SEQ_END	NW_004457316.1	54527	54527	DR	NW_004457316.1; contig end	54527..54527	Acanthamoeba castellanii str. Neff	<NA>
1257118000311	SEQ_END	SEQ_END	NW_004457315.1	14190	14190	DR	NW_004457315.1; contig end	14190..14190	Acanthamoeba castellanii str. Neff	<NA>
1257118000312	SEQ_END	SEQ_END	NW_004457314.1	14894	14894	DR	NW_004457314.1; contig end	14894..14894	Acanthamoeba castellanii str. Neff	<NA>
1257118000313	SEQ_END	SEQ_END	NW_004457313.1	1456477	1456477	DR	NW_004457313.1; contig end	1456477..1456477	Acanthamoeba castellanii str. Neff	<NA>
1257118000314	SEQ_END	SEQ_END	NW_004457312.1	23354	23354	DR	NW_004457312.1; contig end	23354..23354	Acanthamoeba castellanii str. Neff	<NA>
1257118000315	SEQ_END	SEQ_END	NW_004457311.1	17654	17654	DR	NW_004457311.1; contig end	17654..17654	Acanthamoeba castellanii str. Neff	<NA>
1257118000316	SEQ_END	SEQ_END	NW_004457310.1	10223	10223	DR	NW_004457310.1; contig end	10223..10223	Acanthamoeba castellanii str. Neff	<NA>
1257118000317	SEQ_END	SEQ_END	NW_004457309.1	14306	14306	DR	NW_004457309.1; contig end	14306..14306	Acanthamoeba castellanii str. Neff	<NA>
1257118000318	SEQ_END	SEQ_END	NW_004457308.1	54369	54369	DR	NW_004457308.1; contig end	54369..54369	Acanthamoeba castellanii str. Neff	<NA>
1257118000319	SEQ_END	SEQ_END	NW_004457307.1	81777	81777	DR	NW_004457307.1; contig end	81777..81777	Acanthamoeba castellanii str. Neff	<NA>
1257118000320	SEQ_END	SEQ_END	NW_004457306.1	29186	29186	DR	NW_004457306.1; contig end	29186..29186	Acanthamoeba castellanii str. Neff	<NA>
1257118000321	SEQ_END	SEQ_END	NW_004457305.1	12208	12208	DR	NW_004457305.1; contig end	12208..12208	Acanthamoeba castellanii str. Neff	<NA>
1257118000322	SEQ_END	SEQ_END	NW_004457304.1	11498	11498	DR	NW_004457304.1; contig end	11498..11498	Acanthamoeba castellanii str. Neff	<NA>
1257118000323	SEQ_END	SEQ_END	NW_004457303.1	44157	44157	DR	NW_004457303.1; contig end	44157..44157	Acanthamoeba castellanii str. Neff	<NA>
1257118000324	SEQ_END	SEQ_END	NW_004457302.1	74974	74974	DR	NW_004457302.1; contig end	74974..74974	Acanthamoeba castellanii str. Neff	<NA>
1257118000325	SEQ_END	SEQ_END	NW_004457301.1	30755	30755	DR	NW_004457301.1; contig end	30755..30755	Acanthamoeba castellanii str. Neff	<NA>
1257118000326	SEQ_END	SEQ_END	NW_004457300.1	68240	68240	DR	NW_004457300.1; contig end	68240..68240	Acanthamoeba castellanii str. Neff	<NA>
1257118000327	SEQ_END	SEQ_END	NW_004457299.1	14598	14598	DR	NW_004457299.1; contig end	14598..14598	Acanthamoeba castellanii str. Neff	<NA>
1257118000328	SEQ_END	SEQ_END	NW_004457298.1	21231	21231	DR	NW_004457298.1; contig end	21231..21231	Acanthamoeba castellanii str. Neff	<NA>
1257118000329	SEQ_END	SEQ_END	NW_004457297.1	410113	410113	DR	NW_004457297.1; contig end	410113..410113	Acanthamoeba castellanii str. Neff	<NA>
1257118000330	SEQ_END	SEQ_END	NW_004457296.1	15185	15185	DR	NW_004457296.1; contig end	15185..15185	Acanthamoeba castellanii str. Neff	<NA>
1257118000331	SEQ_END	SEQ_END	NW_004457295.1	12880	12880	DR	NW_004457295.1; contig end	12880..12880	Acanthamoeba castellanii str. Neff	<NA>
1257118000332	SEQ_END	SEQ_END	NW_004457294.1	10685	10685	DR	NW_004457294.1; contig end	10685..10685	Acanthamoeba castellanii str. Neff	<NA>
1257118000333	SEQ_END	SEQ_END	NW_004457293.1	32839	32839	DR	NW_004457293.1; contig end	32839..32839	Acanthamoeba castellanii str. Neff	<NA>
1257118000334	SEQ_END	SEQ_END	NW_004457292.1	21440	21440	DR	NW_004457292.1; contig end	21440..21440	Acanthamoeba castellanii str. Neff	<NA>
1257118000335	SEQ_END	SEQ_END	NW_004457291.1	134844	134844	DR	NW_004457291.1; contig end	134844..134844	Acanthamoeba castellanii str. Neff	<NA>
1257118000336	SEQ_END	SEQ_END	NW_004457290.1	16124	16124	DR	NW_004457290.1; contig end	16124..16124	Acanthamoeba castellanii str. Neff	<NA>
1257118000337	SEQ_END	SEQ_END	NW_004457289.1	26972	26972	DR	NW_004457289.1; contig end	26972..26972	Acanthamoeba castellanii str. Neff	<NA>
1257118000338	SEQ_END	SEQ_END	NW_004457288.1	146960	146960	DR	NW_004457288.1; contig end	146960..146960	Acanthamoeba castellanii str. Neff	<NA>
1257118000339	SEQ_END	SEQ_END	NW_004457287.1	11028	11028	DR	NW_004457287.1; contig end	11028..11028	Acanthamoeba castellanii str. Neff	<NA>
1257118000340	SEQ_END	SEQ_END	NW_004457286.1	22004	22004	DR	NW_004457286.1; contig end	22004..22004	Acanthamoeba castellanii str. Neff	<NA>
1257118000341	SEQ_END	SEQ_END	NW_004457285.1	15138	15138	DR	NW_004457285.1; contig end	15138..15138	Acanthamoeba castellanii str. Neff	<NA>
1257118000342	SEQ_END	SEQ_END	NW_004457284.1	12925	12925	DR	NW_004457284.1; contig end	12925..12925	Acanthamoeba castellanii str. Neff	<NA>
1257118000343	SEQ_END	SEQ_END	NW_004457283.1	102745	102745	DR	NW_004457283.1; contig end	102745..102745	Acanthamoeba castellanii str. Neff	<NA>
1257118000344	SEQ_END	SEQ_END	NW_004457282.1	13852	13852	DR	NW_004457282.1; contig end	13852..13852	Acanthamoeba castellanii str. Neff	<NA>
1257118000345	SEQ_END	SEQ_END	NW_004457281.1	10150	10150	DR	NW_004457281.1; contig end	10150..10150	Acanthamoeba castellanii str. Neff	<NA>
1257118000346	SEQ_END	SEQ_END	NW_004457280.1	76509	76509	DR	NW_004457280.1; contig end	76509..76509	Acanthamoeba castellanii str. Neff	<NA>
1257118000347	SEQ_END	SEQ_END	NW_004457279.1	10628	10628	DR	NW_004457279.1; contig end	10628..10628	Acanthamoeba castellanii str. Neff	<NA>
1257118000348	SEQ_END	SEQ_END	NW_004457278.1	112462	112462	DR	NW_004457278.1; contig end	112462..112462	Acanthamoeba castellanii str. Neff	<NA>
1257118000349	SEQ_END	SEQ_END	NW_004457277.1	15892	15892	DR	NW_004457277.1; contig end	15892..15892	Acanthamoeba castellanii str. Neff	<NA>
1257118000350	SEQ_END	SEQ_END	NW_004457276.1	10678	10678	DR	NW_004457276.1; contig end	10678..10678	Acanthamoeba castellanii str. Neff	<NA>
1257118000351	SEQ_END	SEQ_END	NW_004457275.1	12040	12040	DR	NW_004457275.1; contig end	12040..12040	Acanthamoeba castellanii str. Neff	<NA>
1257118000352	SEQ_END	SEQ_END	NW_004457274.1	20370	20370	DR	NW_004457274.1; contig end	20370..20370	Acanthamoeba castellanii str. Neff	<NA>
1257118000353	SEQ_END	SEQ_END	NW_004457273.1	34935	34935	DR	NW_004457273.1; contig end	34935..34935	Acanthamoeba castellanii str. Neff	<NA>
1257118000354	SEQ_END	SEQ_END	NW_004457272.1	11013	11013	DR	NW_004457272.1; contig end	11013..11013	Acanthamoeba castellanii str. Neff	<NA>
1257118000355	SEQ_END	SEQ_END	NW_004457271.1	213154	213154	DR	NW_004457271.1; contig end	213154..213154	Acanthamoeba castellanii str. Neff	<NA>
1257118000356	SEQ_END	SEQ_END	NW_004457270.1	173925	173925	DR	NW_004457270.1; contig end	173925..173925	Acanthamoeba castellanii str. Neff	<NA>
1257118000357	SEQ_END	SEQ_END	NW_004457269.1	282914	282914	DR	NW_004457269.1; contig end	282914..282914	Acanthamoeba castellanii str. Neff	<NA>
1257118000358	SEQ_END	SEQ_END	NW_004457268.1	730521	730521	DR	NW_004457268.1; contig end	730521..730521	Acanthamoeba castellanii str. Neff	<NA>
1257118000359	SEQ_END	SEQ_END	NW_004457267.1	11182	11182	DR	NW_004457267.1; contig end	11182..11182	Acanthamoeba castellanii str. Neff	<NA>
1257118000360	SEQ_END	SEQ_END	NW_004457266.1	14838	14838	DR	NW_004457266.1; contig end	14838..14838	Acanthamoeba castellanii str. Neff	<NA>
1257118000361	SEQ_END	SEQ_END	NW_004457265.1	168070	168070	DR	NW_004457265.1; contig end	168070..168070	Acanthamoeba castellanii str. Neff	<NA>
1257118000362	SEQ_END	SEQ_END	NW_004457264.1	31853	31853	DR	NW_004457264.1; contig end	31853..31853	Acanthamoeba castellanii str. Neff	<NA>
1257118000363	SEQ_END	SEQ_END	NW_004457263.1	165264	165264	DR	NW_004457263.1; contig end	165264..165264	Acanthamoeba castellanii str. Neff	<NA>
1257118000364	SEQ_END	SEQ_END	NW_004457262.1	198480	198480	DR	NW_004457262.1; contig end	198480..198480	Acanthamoeba castellanii str. Neff	<NA>
1257118000365	SEQ_END	SEQ_END	NW_004457261.1	42322	42322	DR	NW_004457261.1; contig end	42322..42322	Acanthamoeba castellanii str. Neff	<NA>
1257118000366	SEQ_END	SEQ_END	NW_004457260.1	320001	320001	DR	NW_004457260.1; contig end	320001..320001	Acanthamoeba castellanii str. Neff	<NA>
1257118000367	SEQ_END	SEQ_END	NW_004457259.1	43273	43273	DR	NW_004457259.1; contig end	43273..43273	Acanthamoeba castellanii str. Neff	<NA>
1257118000368	SEQ_END	SEQ_END	NW_004457258.1	14592	14592	DR	NW_004457258.1; contig end	14592..14592	Acanthamoeba castellanii str. Neff	<NA>
1257118000369	SEQ_END	SEQ_END	NW_004457257.1	14777	14777	DR	NW_004457257.1; contig end	14777..14777	Acanthamoeba castellanii str. Neff	<NA>
1257118000370	SEQ_END	SEQ_END	NW_004457256.1	10714	10714	DR	NW_004457256.1; contig end	10714..10714	Acanthamoeba castellanii str. Neff	<NA>
1257118000371	SEQ_END	SEQ_END	NW_004457255.1	19070	19070	DR	NW_004457255.1; contig end	19070..19070	Acanthamoeba castellanii str. Neff	<NA>
1257118000372	SEQ_END	SEQ_END	NW_004457254.1	18138	18138	DR	NW_004457254.1; contig end	18138..18138	Acanthamoeba castellanii str. Neff	<NA>
1257118000373	SEQ_END	SEQ_END	NW_004457253.1	19866	19866	DR	NW_004457253.1; contig end	19866..19866	Acanthamoeba castellanii str. Neff	<NA>
1257118000374	SEQ_END	SEQ_END	NW_004457252.1	192761	192761	DR	NW_004457252.1; contig end	192761..192761	Acanthamoeba castellanii str. Neff	<NA>
1257118000375	SEQ_END	SEQ_END	NW_004457251.1	10333	10333	DR	NW_004457251.1; contig end	10333..10333	Acanthamoeba castellanii str. Neff	<NA>
1257118000376	SEQ_END	SEQ_END	NW_004457250.1	20507	20507	DR	NW_004457250.1; contig end	20507..20507	Acanthamoeba castellanii str. Neff	<NA>
1257118000377	SEQ_END	SEQ_END	NW_004457249.1	27902	27902	DR	NW_004457249.1; contig end	27902..27902	Acanthamoeba castellanii str. Neff	<NA>
1257118000378	SEQ_END	SEQ_END	NW_004457248.1	13124	13124	DR	NW_004457248.1; contig end	13124..13124	Acanthamoeba castellanii str. Neff	<NA>
1257118000379	SEQ_END	SEQ_END	NW_004457247.1	81344	81344	DR	NW_004457247.1; contig end	81344..81344	Acanthamoeba castellanii str. Neff	<NA>
1257118000380	SEQ_END	SEQ_END	NW_004457246.1	55027	55027	DR	NW_004457246.1; contig end	55027..55027	Acanthamoeba castellanii str. Neff	<NA>
1257118000381	SEQ_END	SEQ_END	NW_004457245.1	205680	205680	DR	NW_004457245.1; contig end	205680..205680	Acanthamoeba castellanii str. Neff	<NA>
1257118000382	SEQ_END	SEQ_END	NW_004457244.1	165220	165220	DR	NW_004457244.1; contig end	165220..165220	Acanthamoeba castellanii str. Neff	<NA>
1257118000383	SEQ_END	SEQ_END	NW_004457243.1	15249	15249	DR	NW_004457243.1; contig end	15249..15249	Acanthamoeba castellanii str. Neff	<NA>
1257118000384	SEQ_END	SEQ_END	NW_004457242.1	144562	144562	DR	NW_004457242.1; contig end	144562..144562	Acanthamoeba castellanii str. Neff	<NA>
ACA1_018340	CDS	ACA1_018340	NW_004457733.1	47	6915	R	encoded by transcript ACA1_018340A; Rap/ran-GAP protein	complement(join(47..129,230..282,352..467,622..693,1437..1510,1601..1804,1884..1988,2079..2217,2465..2691,2758..3184,4432..5104,5161..5309,5404..5571,6224..6357,6434..6545,6751..6915))	Acanthamoeba castellanii str. Neff	14926822
ACA1_018650	CDS	ACA1_018650	NW_004457733.1	7250	9227	R	encoded by transcript ACA1_018650A; helicase associated domain containing protein	complement(join(7250..7518,7633..8156,8866..9227))	Acanthamoeba castellanii str. Neff	14926803
ACA1_018760	CDS	ACA1_018760	NW_004457733.1	10283	11889	D	encoded by transcript ACA1_018760A; cell cycle control protein	join(10283..10367,10439..10572,10643..10849,10951..11041,11148..11268,11349..11482,11574..11657,11771..11889)	Acanthamoeba castellanii str. Neff	14926804
ACA1_018770	CDS	ACA1_018770	NW_004457733.1	12222	14942	D	encoded by transcript ACA1_018770A; signal recognition particle 68 kDa protein	join(12222..12327,12429..12606,12751..13023,13158..13353,13467..13551,13679..13978,14171..14324,14395..14524,14592..14942)	Acanthamoeba castellanii str. Neff	14926805
ACA1_018780	CDS	ACA1_018780	NW_004457733.1	15067	17708	R	encoded by transcript ACA1_018780A; ATPase, AAA domain containing protein	complement(join(15067..15081,15170..15613,15721..15861,15964..16065,16150..16309,16454..16536,16631..16696,16778..16824,16911..16970,17067..17177,17292..17421,17544..17708))	Acanthamoeba castellanii str. Neff	14926806
ACA1_018790	CDS	ACA1_018790	NW_004457733.1	17911	20641	R	encoded by transcript ACA1_018790A; fibronectin type III domain containing protein	complement(join(17911..17936,17956..18084,18120..18216,18284..18397,18472..18508,18592..18864,18942..19081,19163..19369,19432..19542,19665..19759,19819..19933,20057..20641))	Acanthamoeba castellanii str. Neff	14926807
ACA1_018800	CDS	ACA1_018800	NW_004457733.1	21044	23491	R	encoded by transcript ACA1_018800A; uncharacterized protein	complement(join(21044..21284,21358..21516,21599..22077,22146..22333,22408..22531,22633..22727,22812..22921,23001..23089,23195..23283,23365..23491))	Acanthamoeba castellanii str. Neff	14926808
ACA1_018810	CDS	ACA1_018810	NW_004457733.1	23996	25608	D	encoded by transcript ACA1_018810A; uncharacterized protein	join(23996..24431,24534..24899,25008..25119,25193..25338,25460..25608)	Acanthamoeba castellanii str. Neff	14926809
ACA1_018920	CDS	ACA1_018920	NW_004457733.1	25843	28388	R	encoded by transcript ACA1_018920A; uncharacterized protein	complement(join(<25843..25893,26034..26143,26306..26702,26821..26907,26980..27096,27199..27267,27378..27476,27561..28388))	Acanthamoeba castellanii str. Neff	14926810
ACA1_018930	CDS	ACA1_018930	NW_004457733.1	28767	30818	D	encoded by transcript ACA1_018930A; Fbox domain containing protein	join(28767..29029,29128..29470,29568..29708,29848..29969,30123..30255,30353..30466,30548..30673,30771..30818)	Acanthamoeba castellanii str. Neff	14926811
ACA1_018940	CDS	ACA1_018940	NW_004457733.1	30959	31692	R	encoded by transcript ACA1_018940A; uncharacterized protein	complement(join(30959..31116,31193..31279,31342..31428,31515..31692))	Acanthamoeba castellanii str. Neff	14926812
ACA1_018950	CDS	ACA1_018950	NW_004457733.1	32913	33960	R	encoded by transcript ACA1_018950A; lipoprotein, putative	complement(join(32913..33190,33282..33433,33518..33712,33947..33960))	Acanthamoeba castellanii str. Neff	14926813
ACA1_018960	CDS	ACA1_018960	NW_004457733.1	34120	35989	R	encoded by transcript ACA1_018960A; papain family cysteine protease subfamily protein	complement(join(34120..34209,34326..34466,34562..34681,34795..35000,35108..35191,35275..35673,35878..35989))	Acanthamoeba castellanii str. Neff	14926814
ACA1_018970	CDS	ACA1_018970	NW_004457733.1	36179	36622	R	encoded by transcript ACA1_018970A; uncharacterized protein	complement(join(36179..36354,36412..36622))	Acanthamoeba castellanii str. Neff	14926815
ACA1_018980	CDS	ACA1_018980	NW_004457733.1	37064	38136	R	encoded by transcript ACA1_018980A; GTP cyclohydrolase II, putative	complement(join(37064..37164,37283..37397,37561..37661,37755..37791,37942..38136))	Acanthamoeba castellanii str. Neff	14926816
ACA1_018990	CDS	ACA1_018990	NW_004457733.1	38309	45842	R	encoded by transcript ACA1_018990A; Subunit of DNA polymerase II	complement(join(38309..38602,38701..38876,38976..39086,39175..39269,39389..39584,39718..40051,40208..40320,40463..40553,40663..40773,40855..41865,41960..42045,42130..42217,42316..42514,42576..42787,42913..43007,43087..43201,43263..43387,43482..43578,43670..43785,44031..44432,44566..44659,44737..44828,44923..45175,45268..45404,45510..45552,45675..45842))	Acanthamoeba castellanii str. Neff	14926817
ACA1_019000	CDS	ACA1_019000	NW_004457733.1	46050	46500	D	encoded by transcript ACA1_019000A; uncharacterized protein	join(46050..46191,46268..46500)	Acanthamoeba castellanii str. Neff	14926818
ACA1_019010	CDS	ACA1_019010	NW_004457733.1	46618	47048	R	encoded by transcript ACA1_019010A; uncharacterized protein	complement(join(46618..46811,46907..47048))	Acanthamoeba castellanii str. Neff	14926819
ACA1_019020	CDS	ACA1_019020	NW_004457733.1	47268	48518	D	encoded by transcript ACA1_019020A; uncharacterized protein	join(47268..47355,47544..47653,47755..48055,48179..48264,48405..48518)	Acanthamoeba castellanii str. Neff	14926820
ACA1_019030	CDS	ACA1_019030	NW_004457733.1	48573	49800	R	encoded by transcript ACA1_019030A; uncharacterized protein	complement(join(48573..48647,48722..48851,48933..49163,49289..49363,49457..49565,49680..49800))	Acanthamoeba castellanii str. Neff	14926821
ACA1_326570	CDS	ACA1_326570	NW_004457732.1	5059	7164	D	encoded by transcript ACA1_326570A; uncharacterized protein	join(<5059..5316,5407..5595,5658..5824,5898..5988,6078..6239,6354..6508,6594..>7164)	Acanthamoeba castellanii str. Neff	14926802
ACA1_326680	CDS	ACA1_326680	NW_004457732.1	9368	9710	R	encoded by transcript ACA1_326680A; uncharacterized protein	complement(join(<9368..9461,9493..9710))	Acanthamoeba castellanii str. Neff	14926779
ACA1_326690	CDS	ACA1_326690	NW_004457732.1	11851	12142	R	encoded by transcript ACA1_326690A; uncharacterized protein	complement(join(11851..12042,12101..12142))	Acanthamoeba castellanii str. Neff	14926789
ACA1_326700	CDS	ACA1_326700	NW_004457732.1	12231	13854	R	encoded by transcript ACA1_326700A; uncharacterized protein	complement(join(12231..12398,12455..12817,12884..12920,13086..13159,13217..13279,13454..13551,13647..13854))	Acanthamoeba castellanii str. Neff	14926790
ACA1_326710	CDS	ACA1_326710	NW_004457732.1	14239	14772	R	encoded by transcript ACA1_326710A; uncharacterized protein	complement(join(14239..14256,14338..14538,14596..14772))	Acanthamoeba castellanii str. Neff	14926791
ACA1_326720	CDS	ACA1_326720	NW_004457732.1	16013	17000	D	encoded by transcript ACA1_326720A; uncharacterized protein	join(<16013..16288,16346..16457,16517..16728,16800..17000)	Acanthamoeba castellanii str. Neff	14926780
ACA1_326730	CDS	ACA1_326730	NW_004457732.1	18570	19123	D	encoded by transcript ACA1_326730A; uncharacterized protein	join(18570..18614,18644..19123)	Acanthamoeba castellanii str. Neff	14926781
ACA1_326740	CDS	ACA1_326740	NW_004457732.1	19318	24365	R	encoded by transcript ACA1_326740A; Myosin2 heavy chain, non muscle, putative	complement(join(19318..23305,23483..23667,23738..23887,24159..24365))	Acanthamoeba castellanii str. Neff	14926782
ACA1_326750	CDS	ACA1_326750	NW_004457732.1	25024	28264	R	encoded by transcript ACA1_326750A; homeobox domain containing protein	complement(join(25024..25348,25445..26312,26395..27281,27414..27550,27638..27810,27940..28130,28227..28264))	Acanthamoeba castellanii str. Neff	14926783
ACA1_326760	CDS	ACA1_326760	NW_004457732.1	29574	30845	D	encoded by transcript ACA1_326760A; uncharacterized protein	join(29574..29703,29778..30181,30277..30448,30529..30845)	Acanthamoeba castellanii str. Neff	14926784
ACA1_326770	CDS	ACA1_326770	NW_004457732.1	30981	32578	R	encoded by transcript ACA1_326770A; SH3 domain containing protein	complement(join(30981..32029,32134..32578))	Acanthamoeba castellanii str. Neff	14926785
ACA1_326780	CDS	ACA1_326780	NW_004457732.1	32929	33794	D	encoded by transcript ACA1_326780A; intestinal cell kinase	join(32929..33054,33114..33182,33239..33323,33418..33535,33592..33647,33698..33756,33777..33794)	Acanthamoeba castellanii str. Neff	14926786
ACA1_326790	CDS	ACA1_326790	NW_004457732.1	34548	40863	R	encoded by transcript ACA1_326790A; helicase conserved Cterminal domain containing protein	complement(join(34548..34697,34776..35017,35107..35425,35537..35799,35891..35957,36065..36345,36444..36526,36589..36806,36883..37415,37553..37626,37750..37833,37909..38035,38143..39219,39337..39919,39989..40045,40174..40347,40449..40514,40607..40639,40690..40863))	Acanthamoeba castellanii str. Neff	14926787
ACA1_326800	CDS	ACA1_326800	NW_004457732.1	41281	42718	D	encoded by transcript ACA1_326800A; RNA recognition motif domain containing protein	join(41281..41514,41600..41702,41807..41923,42000..42079,42194..42312,42398..42467,42578..42718)	Acanthamoeba castellanii str. Neff	14926788
ACA1_326820	CDS	ACA1_326820	NW_004457732.1	49957	50742	D	encoded by transcript ACA1_326820A; eukaryotic ribosomal protein L18, putative	join(49957..49962,50019..50105,50197..50588,50667..50742)	Acanthamoeba castellanii str. Neff	14926793
ACA1_326830	CDS	ACA1_326830	NW_004457732.1	50868	51383	R	encoded by transcript ACA1_326830A; uncharacterized protein	complement(join(50868..50942,51024..51088,51173..51383))	Acanthamoeba castellanii str. Neff	14926794
ACA1_326840	CDS	ACA1_326840	NW_004457732.1	51451	53273	D	encoded by transcript ACA1_326840A; mevalonate kinase	join(51451..51546,51640..52204,52281..52350,52435..52522,52601..52703,52780..52895,52992..53132,53211..53273)	Acanthamoeba castellanii str. Neff	14926795
ACA1_326850	CDS	ACA1_326850	NW_004457732.1	53724	55236	D	encoded by transcript ACA1_326850A; protein kinase domain containing protein	join(53724..53838,54017..54215,54289..54366,54442..54657,54738..55236)	Acanthamoeba castellanii str. Neff	14926796
ACA1_326860	CDS	ACA1_326860	NW_004457732.1	55381	59390	R	encoded by transcript ACA1_326860A; lipase	complement(join(55381..55509,55586..55637,55732..55930,56019..56074,56155..56275,56372..56511,56617..56693,56706..56825,56958..57047,57142..57516,57608..57632,57751..57903,57991..58081,58180..58270,58350..58930,59014..59219,59302..59390))	Acanthamoeba castellanii str. Neff	14926797
ACA1_326870	CDS	ACA1_326870	NW_004457732.1	59962	61761	D	encoded by transcript ACA1_326870A; FYVE zinc finger domain/Ankyrin repeatcontaining protein	join(59962..61188,61265..61354,61654..61761)	Acanthamoeba castellanii str. Neff	14926798
ACA1_326880	CDS	ACA1_326880	NW_004457732.1	62348	64293	R	encoded by transcript ACA1_326880A; uncharacterized protein	complement(join(62348..62426,62447..62503,62554..62975,63027..63377,63470..63541,63625..64293))	Acanthamoeba castellanii str. Neff	14926799
ACA1_326890	CDS	ACA1_326890	NW_004457732.1	64873	67030	D	encoded by transcript ACA1_326890A; WD domain, Gbeta repeat-containing protein	join(64873..65081,65222..65360,65470..65625,65707..65856,65940..66093,66229..66354,66631..66698,66762..66849,66942..67030)	Acanthamoeba castellanii str. Neff	14926800
ACA1_326900	CDS	ACA1_326900	NW_004457732.1	67508	69787	D	encoded by transcript ACA1_326900A; uncharacterized protein	join(67508..69019,69032..>69787)	Acanthamoeba castellanii str. Neff	14926801
ACA1_308130	CDS	ACA1_308130	NW_004457731.1	1083	1555	D	encoded by transcript ACA1_308130A; uncharacterized protein	join(1083..1233,1301..1394,1549..1555)	Acanthamoeba castellanii str. Neff	14926778
ACA1_308240	CDS	ACA1_308240	NW_004457731.1	2426	8325	D	encoded by transcript ACA1_308240A; uncharacterized protein	join(2426..2482,2581..2688,2750..2946,3148..3331,3409..3478,4398..5083,5721..6228,6243..6829,7440..7456,7471..7526,7593..7731,7799..7891,7987..8143,8236..8325)	Acanthamoeba castellanii str. Neff	14926776
ACA1_308650	CDS	ACA1_308650	NW_004457731.1	12355	15452	R	encoded by transcript ACA1_308650A; uncharacterized protein	complement(join(12355..12855,12927..13007,13085..13208,14096..14205,14269..14352,14376..15452))	Acanthamoeba castellanii str. Neff	14926773
ACA1_308760	CDS	ACA1_308760	NW_004457731.1	15689	15913	R	encoded by transcript ACA1_308760A; uncharacterized protein	complement(15689..15913)	Acanthamoeba castellanii str. Neff	14926777
ACA1_308770	CDS	ACA1_308770	NW_004457731.1	16095	17950	R	encoded by transcript ACA1_308770A; fumarylacetoacetase	complement(join(16095..16283,16362..16542,16632..16759,16844..16896,16962..17061,17155..17305,17395..17657,17729..17950))	Acanthamoeba castellanii str. Neff	14926774
ACA1_308780	CDS	ACA1_308780	NW_004457731.1	18214	20013	R	encoded by transcript ACA1_308780A; leucine rich repeat domain containing protein	complement(join(18214..18220,18313..18470,18590..19609,19684..19763,19845..20013))	Acanthamoeba castellanii str. Neff	14926775
ACA1_084600	CDS	ACA1_084600	NW_004457730.1	95	973	R	encoded by transcript ACA1_084600A; AAA family ATPase	complement(join(<95..180,261..337,432..596,732..>973))	Acanthamoeba castellanii str. Neff	14926772
ACA1_084810	CDS	ACA1_084810	NW_004457730.1	5144	5542	R	encoded by transcript ACA1_084810A; uncharacterized protein	complement(5144..5542)	Acanthamoeba castellanii str. Neff	14926741
ACA1_084820	CDS	ACA1_084820	NW_004457730.1	6170	10920	D	encoded by transcript ACA1_084820A; RhoGEF domain containing protein	join(6170..6508,6677..6754,6827..6900,6984..7103,7283..7406,7534..8219,8288..8384,8459..8597,8703..8764,8850..8931,9017..9172,9261..9324,9417..9548,9695..9844,9980..10088,10274..10333,10418..10523,10705..10748,10816..10920)	Acanthamoeba castellanii str. Neff	14926742
ACA1_084830	CDS	ACA1_084830	NW_004457730.1	11982	14039	R	encoded by transcript ACA1_084830A; uncharacterized protein	complement(join(11982..13526,13679..13828,13935..14039))	Acanthamoeba castellanii str. Neff	14926751
ACA1_084840	CDS	ACA1_084840	NW_004457730.1	14469	15833	D	encoded by transcript ACA1_084840A; xylosyltransferase 1, putative	join(14469..15185,15275..15430,15507..15566,15681..15833)	Acanthamoeba castellanii str. Neff	14926743
ACA1_084850	CDS	ACA1_084850	NW_004457730.1	15962	20130	R	encoded by transcript ACA1_084850A; MyTH4 domain containing protein	complement(join(15962..16039,16151..16273,16342..16422,16524..16592,16654..16768,16850..17096,17185..17478,17544..17625,17707..17803,17906..18015,18151..18268,18357..18507,18596..18689,18778..18878,18994..19150,19262..19621,19710..19832,19909..20022,20083..20130))	Acanthamoeba castellanii str. Neff	14926744
ACA1_084860	CDS	ACA1_084860	NW_004457730.1	20344	26710	R	encoded by transcript ACA1_084860A; myosin head (motor domain) domain containing protein	complement(join(20344..20466,20532..20773,20858..20947,21024..21102,21173..21476,21546..21599,21672..21745,21816..21874,21942..22020,22108..22246,22328..22435,22501..22775,22898..23009,23087..23178,23269..23331,23409..23519,23611..23716,23793..23950,24014..24256,24321..24488,24570..24737,24809..24985,25059..25177,25241..25376,25437..25540,25611..25709,25788..25854,25951..26119,26190..26374,26489..26710))	Acanthamoeba castellanii str. Neff	14926745
ACA1_084880	CDS	ACA1_084880	NW_004457730.1	29240	31085	R	encoded by transcript ACA1_084880A; transcriptional regulator, Sir2 family protein	complement(join(29240..30434,30563..30885,30993..31085))	Acanthamoeba castellanii str. Neff	14926747
ACA1_084890	CDS	ACA1_084890	NW_004457730.1	31476	32015	D	encoded by transcript ACA1_084890A; ADPribosylation factor, putative	31476..32015	Acanthamoeba castellanii str. Neff	14926748
ACA1_084900	CDS	ACA1_084900	NW_004457730.1	32236	34121	D	encoded by transcript ACA1_084900A; uncharacterized protein	join(32236..32340,32460..32609,32787..34121)	Acanthamoeba castellanii str. Neff	14926749
ACA1_084920	CDS	ACA1_084920	NW_004457730.1	34965	36715	D	encoded by transcript ACA1_084920A; phospholipase, putative	join(34965..35080,35176..35230,35298..35419,35482..35596,35684..35757,35832..35910,35990..36064,36162..36359,36447..36549,36708..36715)	Acanthamoeba castellanii str. Neff	14926752
ACA1_084930	CDS	ACA1_084930	NW_004457730.1	37625	38244	R	encoded by transcript ACA1_084930A; carrier superfamily protein	complement(join(37625..37705,37835..38052,38163..38244))	Acanthamoeba castellanii str. Neff	14926753
ACA1_085040	CDS	ACA1_085040	NW_004457730.1	41302	44002	R	encoded by transcript ACA1_085040A; eukaryotic dna topoisomerase, putative	complement(join(41302..41339,41452..41878,41984..43618,43754..44002))	Acanthamoeba castellanii str. Neff	14926754
ACA1_085050	CDS	ACA1_085050	NW_004457730.1	44475	51951	R	encoded by transcript ACA1_085050A; START domain containing protein	complement(join(44475..44727,44791..45133,45220..45327,45410..45490,45563..45962,46063..46188,46293..46480,46576..46712,46799..46922,47026..47184,47257..47418,47504..47668,47727..47907,48009..48070,48145..48303,48407..48500,48583..48699,48809..48879,48951..49074,49201..49349,49422..49545,49636..49773,49887..50129,50257..50422,50505..50629,50857..51951))	Acanthamoeba castellanii str. Neff	14926755
ACA1_085170	CDS	ACA1_085170	NW_004457730.1	60172	67294	D	encoded by transcript ACA1_085170A; tetratricopeptide repeat domain containing protein	join(60172..60226,60452..60524,60605..61159,61247..61381,61456..61619,61688..61763,61838..61928,61998..62185,62268..62485,62586..62727,62810..62972,63048..63200,63282..63406,63496..63626,63723..63859,63969..64105,64204..64271,64478..64665,64762..64898,65041..65167,65288..65390,65475..65558,65690..65822,65901..66045,66216..66331,66458..66573,66653..66906,67139..67294)	Acanthamoeba castellanii str. Neff	14926757
ACA1_085180	CDS	ACA1_085180	NW_004457730.1	67376	68615	R	encoded by transcript ACA1_085180A; RFX DNAbinding domain containing protein	complement(join(67376..67747,67917..68025,68058..68110,68204..68339,68557..68615))	Acanthamoeba castellanii str. Neff	14926758
ACA1_085190	CDS	ACA1_085190	NW_004457730.1	68923	71523	R	encoded by transcript ACA1_085190A; RFX DNAbinding domain containing protein	complement(join(68923..70416,70788..70923,71468..71523))	Acanthamoeba castellanii str. Neff	14926759
ACA1_085200	CDS	ACA1_085200	NW_004457730.1	72429	73068	R	encoded by transcript ACA1_085200A; uncharacterized protein	complement(join(72429..72578,72683..72777,72906..73068))	Acanthamoeba castellanii str. Neff	14926760
ACA1_085210	CDS	ACA1_085210	NW_004457730.1	73221	74817	D	encoded by transcript ACA1_085210A; thiF family protein	join(73221..73576,73657..73888,74019..74239,74326..74539,74614..74817)	Acanthamoeba castellanii str. Neff	14926761
ACA1_085220	CDS	ACA1_085220	NW_004457730.1	75499	76776	D	encoded by transcript ACA1_085220A; uncharacterized protein	join(75499..75999,76078..76776)	Acanthamoeba castellanii str. Neff	14926762
ACA1_085230	CDS	ACA1_085230	NW_004457730.1	77974	79054	R	encoded by transcript ACA1_085230A; uncharacterized protein	complement(join(77974..78114,78178..78836,78901..79054))	Acanthamoeba castellanii str. Neff	14926763
ACA1_085240	CDS	ACA1_085240	NW_004457730.1	80349	80858	R	encoded by transcript ACA1_085240A; uncharacterized protein	complement(join(80349..80492,80561..80626,80685..80721,80818..80858))	Acanthamoeba castellanii str. Neff	14926764
ACA1_085250	CDS	ACA1_085250	NW_004457730.1	82825	83405	D	encoded by transcript ACA1_085250A; uncharacterized protein	join(82825..83016,83376..83405)	Acanthamoeba castellanii str. Neff	14926765
ACA1_085260	CDS	ACA1_085260	NW_004457730.1	85131	85388	R	encoded by transcript ACA1_085260A; uncharacterized protein	complement(join(85131..85291,85331..85388))	Acanthamoeba castellanii str. Neff	14926766
ACA1_085270	CDS	ACA1_085270	NW_004457730.1	87652	88795	R	encoded by transcript ACA1_085270A; uncharacterized protein	complement(join(87652..87668,87916..88578,88642..88795))	Acanthamoeba castellanii str. Neff	14926767
ACA1_085280	CDS	ACA1_085280	NW_004457730.1	89356	90533	R	encoded by transcript ACA1_085280A; uncharacterized protein	complement(join(89356..89778,89854..89922,89987..90169,90235..90303,90362..90398,90493..90533))	Acanthamoeba castellanii str. Neff	14926768
ACA1_085290	CDS	ACA1_085290	NW_004457730.1	90956	93925	R	encoded by transcript ACA1_085290A; phosphoenolpyruvate carboxykinase	complement(join(90956..91086,91181..91198,91360..91594,93164..93251,93343..93546,93726..93925))	Acanthamoeba castellanii str. Neff	14926769
ACA1_085500	CDS	ACA1_085500	NW_004457730.1	96156	98390	D	encoded by transcript ACA1_085500A; uncharacterized protein	join(96156..96249,96382..96454,96549..96620,96717..96828,96937..97029,97107..97207,97283..97443,97528..97603,97702..97865,97961..98126,98198..98390)	Acanthamoeba castellanii str. Neff	14926770
ACA1_085610	CDS	ACA1_085610	NW_004457730.1	102320	103124	R	encoded by transcript ACA1_085610A; uncharacterized protein	complement(join(<102320..102655,102768..103124))	Acanthamoeba castellanii str. Neff	14926771
ACA1_048850	CDS	ACA1_048850	NW_004457727.1	49	1639	R	encoded by transcript ACA1_048850A; uncharacterized protein	complement(join(<49..685,777..1639))	Acanthamoeba castellanii str. Neff	14926738
ACA1_048860	CDS	ACA1_048860	NW_004457727.1	2109	4877	D	encoded by transcript ACA1_048860A; transmembrane amino acid transporter protein	join(2109..2169,2382..2505,2598..2680,2814..2933,3031..3099,3232..3310,3424..3512,3645..3744,3841..3919,4024..4140,4259..4702,4821..4877)	Acanthamoeba castellanii str. Neff	14926740
ACA1_048870	CDS	ACA1_048870	NW_004457727.1	5001	7517	R	encoded by transcript ACA1_048870A; uncharacterized protein	complement(join(5001..5209,5268..5856,5969..6102,6195..6274,6348..6450,6545..6674,6808..6870,6970..7195,7285..7390,7469..7517))	Acanthamoeba castellanii str. Neff	14926739
ACA1_048880	CDS	ACA1_048880	NW_004457727.1	8171	11306	D	encoded by transcript ACA1_048880A; LIM domain containing protein	join(8171..9878,9937..10024,10101..10197,10269..10471,10597..10720,10819..10921,11017..11134,11219..11306)	Acanthamoeba castellanii str. Neff	14926736
ACA1_048890	CDS	ACA1_048890	NW_004457727.1	11440	12580	R	encoded by transcript ACA1_048890A; uncharacterized protein	complement(join(11440..11486,11638..11740,11893..11952,12087..12175,12313..>12580))	Acanthamoeba castellanii str. Neff	14926737
ACA1_319420	CDS	ACA1_319420	NW_004457725.1	1524	2799	R	encoded by transcript ACA1_319420A; uncharacterized protein	complement(join(<1524..1656,1806..2094,2226..2279,2357..2596,2652..2799))	Acanthamoeba castellanii str. Neff	14926735
ACA1_319530	CDS	ACA1_319530	NW_004457725.1	3613	5296	R	encoded by transcript ACA1_319530A; uncharacterized protein	complement(join(3613..4068,4150..4195,4779..4974,5077..5296))	Acanthamoeba castellanii str. Neff	14926734
ACA1_319640	CDS	ACA1_319640	NW_004457725.1	5535	7406	R	encoded by transcript ACA1_319640A; LIM domain containing protein	complement(join(5535..5718,5850..5965,6065..6133,6681..6766,6879..7015,7117..7205,7295..7327,7347..7406))	Acanthamoeba castellanii str. Neff	14926729
ACA1_319950	CDS	ACA1_319950	NW_004457725.1	13993	16538	R	encoded by transcript ACA1_319950A; uncharacterized protein	complement(join(13993..14097,14109..16538))	Acanthamoeba castellanii str. Neff	14926730
ACA1_319960	CDS	ACA1_319960	NW_004457725.1	16814	18637	R	encoded by transcript ACA1_319960A; RasGEF domain containing protein	complement(join(16814..16891,17028..17227,17333..17524,17614..17737,17820..17912,18041..18130,18251..18346,18476..18637))	Acanthamoeba castellanii str. Neff	14926731
ACA1_319970	CDS	ACA1_319970	NW_004457725.1	18842	21369	R	encoded by transcript ACA1_319970A; gguanine nucleotide exchange factor motif containing protein	complement(join(18842..18923,19042..19320,19452..19794,19882..20472,20560..20609,20688..20869,20932..21101,21173..21246,21359..21369))	Acanthamoeba castellanii str. Neff	14926732
ACA1_319980	CDS	ACA1_319980	NW_004457725.1	21913	23223	R	encoded by transcript ACA1_319980A; 3'5'cyclic nucleotide phosphodiesterase	complement(join(21913..22116,22236..22358,22492..22651,22772..22930,23020..>23223))	Acanthamoeba castellanii str. Neff	14926733
ACA1_119000	CDS	ACA1_119000	NW_004457724.1	5494	6830	D	encoded by transcript ACA1_119000A; uncharacterized protein	join(5494..5753,5814..5839,5979..6058,6172..6264,6369..6382,6437..6504,6658..6698,6810..6830)	Acanthamoeba castellanii str. Neff	14926728
ACA1_119010	CDS	ACA1_119010	NW_004457724.1	8664	11693	D	encoded by transcript ACA1_119010A; uncharacterized protein	join(8664..8829,8972..9202,9306..9402,9536..9734,10065..10663,10738..10792,10871..10960,11062..11154,11266..11279,11334..11401,11521..11561,11673..11693)	Acanthamoeba castellanii str. Neff	14926699
ACA1_119120	CDS	ACA1_119120	NW_004457724.1	12236	14784	R	encoded by transcript ACA1_119120A; Ubox domain containing protein	complement(join(12236..12955,13110..13235,13318..13358,13443..13572,13654..13814,13869..13963,14031..14104,14189..14259,14352..14448,14560..14784))	Acanthamoeba castellanii str. Neff	14926700
ACA1_119130	CDS	ACA1_119130	NW_004457724.1	15381	17519	R	encoded by transcript ACA1_119130A; uncharacterized protein	complement(join(15381..15467,15551..15639,15835..15956,16131..16270,16363..16535,16632..16914,17014..17093,17204..17265,17377..17519))	Acanthamoeba castellanii str. Neff	14926701
ACA1_119140	CDS	ACA1_119140	NW_004457724.1	17787	20445	R	encoded by transcript ACA1_119140A; uncharacterized protein	complement(join(17787..19220,19303..19550,19634..19805,19835..19998,20115..20445))	Acanthamoeba castellanii str. Neff	14926702
ACA1_119150	CDS	ACA1_119150	NW_004457724.1	24428	30101	R	encoded by transcript ACA1_119150A; Interferoninducible protein Gig2, putative	complement(join(24428..24622,24740..24889,25004..25276,25377..25517,25608..25760,25886..26094,26195..26246,26339..26552,26650..26859,26947..27117,27205..27321,27407..27516,27637..27783,27872..28051,28132..28372,28464..28602,28682..28855,28949..29141,29235..29435,29516..29604,29682..29848,29971..30101))	Acanthamoeba castellanii str. Neff	14926703
ACA1_119160	CDS	ACA1_119160	NW_004457724.1	30370	30840	D	encoded by transcript ACA1_119160A; ribosomal protein L31e, putative	join(30370..30458,30570..30840)	Acanthamoeba castellanii str. Neff	14926704
ACA1_119170	CDS	ACA1_119170	NW_004457724.1	31050	31782	D	encoded by transcript ACA1_119170A; uncharacterized protein	join(31050..31357,31437..31782)	Acanthamoeba castellanii str. Neff	14926705
ACA1_119180	CDS	ACA1_119180	NW_004457724.1	31951	34603	R	encoded by transcript ACA1_119180A; ribonucleosidediphosphate reductase, alpha subunit	complement(join(31951..33557,33657..34491,34568..34603))	Acanthamoeba castellanii str. Neff	14926706
ACA1_119190	CDS	ACA1_119190	NW_004457724.1	35055	38846	D	encoded by transcript ACA1_119190A; uncharacterized protein	join(35055..35324,35417..35921,36077..36142,36222..36283,36408..36527,36707..36835,36925..37011,37174..37341,37459..37544,37681..37981,38070..38382,38470..38675,38766..38846)	Acanthamoeba castellanii str. Neff	14926707
ACA1_119200	CDS	ACA1_119200	NW_004457724.1	38957	39727	R	encoded by transcript ACA1_119200A; BTB/POZ domain containing protein	complement(38957..39727)	Acanthamoeba castellanii str. Neff	14926708
ACA1_119210	CDS	ACA1_119210	NW_004457724.1	40665	44039	R	encoded by transcript ACA1_119210A; CUE domain containing protein	complement(join(40665..41292,41420..41748,41825..41945,42089..42236,42323..42373,42485..42586,42675..42936,43066..43155,43228..43373,43498..43764,43850..44039))	Acanthamoeba castellanii str. Neff	14926709
ACA1_119220	CDS	ACA1_119220	NW_004457724.1	44573	45356	D	encoded by transcript ACA1_119220A; peptidylprolyl cis-trans isomerase, cyclophilin-type family protein	join(<44573..44660,44856..44936,45016..45114,45217..45356)	Acanthamoeba castellanii str. Neff	14926710
ACA1_119230	CDS	ACA1_119230	NW_004457724.1	45667	48559	D	encoded by transcript ACA1_119230A; Armadillo/betacatenin-like repeat domain containing protein	join(45667..45724,45895..46020,46116..46247,46378..46503,46598..46717,46803..46928,47004..47129,47218..47340,47416..47532,47605..47738,47822..48362,48432..48559)	Acanthamoeba castellanii str. Neff	14926711
ACA1_119240	CDS	ACA1_119240	NW_004457724.1	48861	51085	D	encoded by transcript ACA1_119240A; glutamicoxaloacetic transaminase, mitochondrial, putative	join(48861..48883,49111..49258,49393..49639,49769..49968,50079..50222,50328..50516,50620..50859,50963..51085)	Acanthamoeba castellanii str. Neff	14926712
ACA1_119250	CDS	ACA1_119250	NW_004457724.1	51290	51673	R	encoded by transcript ACA1_119250A; uncharacterized protein	complement(join(51290..51327,51409..51523,51620..51673))	Acanthamoeba castellanii str. Neff	14926713
ACA1_119270	CDS	ACA1_119270	NW_004457724.1	55847	57080	D	encoded by transcript ACA1_119270A; Raclike protein	join(<55847..55895,55971..56044,56114..56150,56231..56417,56525..56600,56705..56833,56944..57036,57060..57080)	Acanthamoeba castellanii str. Neff	14926715
ACA1_119280	CDS	ACA1_119280	NW_004457724.1	57364	59242	R	encoded by transcript ACA1_119280A; uncharacterized protein	complement(join(57364..57507,57608..57654,57830..57963,58042..58149,58266..58795,58949..59242))	Acanthamoeba castellanii str. Neff	14926716
ACA1_119290	CDS	ACA1_119290	NW_004457724.1	59416	59754	R	encoded by transcript ACA1_119290A; uncharacterized protein	complement(59416..>59754)	Acanthamoeba castellanii str. Neff	14926717
ACA1_119400	CDS	ACA1_119400	NW_004457724.1	61181	63409	D	encoded by transcript ACA1_119400A; eIF4gamma/eIF5/eIF2-epsilon domain containing protein	join(<61181..61545,61697..61835,61897..62106,62179..62332,62429..62671,62748..62824,62893..62973,63084..63236,63323..63409)	Acanthamoeba castellanii str. Neff	14926718
ACA1_119410	CDS	ACA1_119410	NW_004457724.1	63557	64902	D	encoded by transcript ACA1_119410A; COP9, putative	join(63557..63718,63917..63992,64086..64174,64237..64439,64536..64745,64848..64902)	Acanthamoeba castellanii str. Neff	14926719
ACA1_119420	CDS	ACA1_119420	NW_004457724.1	65134	66058	R	encoded by transcript ACA1_119420A; uncharacterized protein	complement(join(65134..65811,66002..66058))	Acanthamoeba castellanii str. Neff	14926720
ACA1_119430	CDS	ACA1_119430	NW_004457724.1	66413	69444	D	encoded by transcript ACA1_119430A; RNA recognition motif domain containing protein	join(66413..66464,66598..66699,66800..67341,67478..67658,68000..68027,68038..68187,68452..68857,68956..69261,69379..69444)	Acanthamoeba castellanii str. Neff	14926721
ACA1_119440	CDS	ACA1_119440	NW_004457724.1	69650	72758	R	encoded by transcript ACA1_119440A; Serine carboxypeptidase S28	complement(join(69650..69849,69942..70068,70154..70280,70388..70521,70650..70763,70868..70963,71098..71193,71274..71359,71442..71598,71718..71772,71868..71967,72088..72159,72291..72402,72579..72758))	Acanthamoeba castellanii str. Neff	14926722
ACA1_119450	CDS	ACA1_119450	NW_004457724.1	73748	77578	D	encoded by transcript ACA1_119450A; Methyltransferase	join(73748..73835,74039..74175,74272..74424,74524..74633,74792..74977,75061..75195,75295..75399,75528..75628,75707..75840,75971..76152,76207..76404,76522..76682,76739..76985,77079..77203,77327..77424,77558..77578)	Acanthamoeba castellanii str. Neff	14926723
ACA1_119460	CDS	ACA1_119460	NW_004457724.1	78391	78968	D	encoded by transcript ACA1_119460A; uncharacterized protein	join(78391..78419,78506..78968)	Acanthamoeba castellanii str. Neff	14926724
ACA1_119470	CDS	ACA1_119470	NW_004457724.1	80438	81536	D	encoded by transcript ACA1_119470A; mitogen-activated protein kinase kinase	join(80438..80626,80707..80784,80880..80988,81149..81212,81251..81536)	Acanthamoeba castellanii str. Neff	14926725
ACA1_119480	CDS	ACA1_119480	NW_004457724.1	82425	83892	D	encoded by transcript ACA1_119480A; uncharacterized protein	join(82425..83019,83123..83892)	Acanthamoeba castellanii str. Neff	14926726
ACA1_119490	CDS	ACA1_119490	NW_004457724.1	84135	84495	D	encoded by transcript ACA1_119490A; zinc finger domain containing protein	join(84135..84326,84427..84495)	Acanthamoeba castellanii str. Neff	14926727
ACA1_073830	CDS	ACA1_073830	NW_004457722.1	197	1038	R	encoded by transcript ACA1_073830A; uncharacterized protein	complement(join(<197..300,370..765,822..898,974..1038))	Acanthamoeba castellanii str. Neff	14926698
ACA1_073840	CDS	ACA1_073840	NW_004457722.1	1215	1427	D	encoded by transcript ACA1_073840A; uncharacterized protein	1215..1427	Acanthamoeba castellanii str. Neff	14926682
ACA1_073950	CDS	ACA1_073950	NW_004457722.1	6648	7010	D	encoded by transcript ACA1_073950A; uncharacterized protein	join(6648..6755,6831..7010)	Acanthamoeba castellanii str. Neff	14926683
ACA1_073960	CDS	ACA1_073960	NW_004457722.1	7910	9193	D	encoded by transcript ACA1_073960A; uncharacterized protein	join(<7910..8033,8131..8199,8276..8397,8473..8635,8711..8869,8934..>9193)	Acanthamoeba castellanii str. Neff	14926684
ACA1_074070	CDS	ACA1_074070	NW_004457722.1	13633	16554	R	encoded by transcript ACA1_074070A; uncharacterized protein	complement(join(13633..14457,14519..14719,14797..14908,14978..15267,15304..15812,15920..16230,16469..16554))	Acanthamoeba castellanii str. Neff	14926685
ACA1_074080	CDS	ACA1_074080	NW_004457722.1	17268	20058	R	encoded by transcript ACA1_074080A; uncharacterized protein	complement(join(17268..17918,17995..18109,18214..18299,18378..18489,18576..18654,18799..19752,19861..19969,19993..20058))	Acanthamoeba castellanii str. Neff	14926686
ACA1_074090	CDS	ACA1_074090	NW_004457722.1	21015	22273	D	encoded by transcript ACA1_074090A; AT hook motif domain containing protein	join(21015..21105,21261..21371,21558..22273)	Acanthamoeba castellanii str. Neff	14926687
ACA1_074100	CDS	ACA1_074100	NW_004457722.1	22578	25120	D	encoded by transcript ACA1_074100A; fungal Zn(2)-Cys(6) binuclear cluster domain containing protein	join(22578..22711,22794..23801,23879..23993,24089..24174,24291..24405,24517..24613,24720..25120)	Acanthamoeba castellanii str. Neff	14926688
ACA1_074110	CDS	ACA1_074110	NW_004457722.1	25245	30395	R	encoded by transcript ACA1_074110A; peptidase	complement(join(25245..25398,25494..25738,25861..25988,26083..26182,26291..26556,26637..26757,26863..26973,27055..27135,27240..27318,27387..27481,27564..27656,27743..27848,27961..28106,28210..28340,28426..28684,28779..28847,28962..29066,29148..29242,29325..29384,29482..29545,29728..29861,29970..30045,30120..30152,30318..30395))	Acanthamoeba castellanii str. Neff	14926689
ACA1_074120	CDS	ACA1_074120	NW_004457722.1	31319	31693	D	encoded by transcript ACA1_074120A; uncharacterized protein	31319..31693	Acanthamoeba castellanii str. Neff	14926690
ACA1_074130	CDS	ACA1_074130	NW_004457722.1	32380	33467	D	encoded by transcript ACA1_074130A; Acyltransferase	join(32380..32400,32421..32499,32603..32726,32808..32965,33015..33120,33185..33248,33324..33467)	Acanthamoeba castellanii str. Neff	14926691
ACA1_074140	CDS	ACA1_074140	NW_004457722.1	34080	36534	D	encoded by transcript ACA1_074140A; transporter, major facilitator subfamily protein	join(34080..34149,34241..34336,34399..34599,34683..34786,34886..35012,35117..35192,35235..35369,35535..35631,35724..35824,35899..35972,36044..36154,36228..36353,36440..36534)	Acanthamoeba castellanii str. Neff	14926692
ACA1_074150	CDS	ACA1_074150	NW_004457722.1	36786	37476	D	encoded by transcript ACA1_074150A; universal stress protein	join(36786..37031,37115..37233,37332..37476)	Acanthamoeba castellanii str. Neff	14926693
ACA1_074160	CDS	ACA1_074160	NW_004457722.1	38310	40835	D	encoded by transcript ACA1_074160A; alpha amylase	join(38310..38544,38652..38774,38876..39009,39091..39260,39356..39394,39463..39532,39607..39738,39832..39955,40035..40126,40190..40254,40322..40443,40520..40672,40744..40835)	Acanthamoeba castellanii str. Neff	14926694
ACA1_074170	CDS	ACA1_074170	NW_004457722.1	41035	41349	R	encoded by transcript ACA1_074170A; uncharacterized protein	complement(join(41035..41124,41236..41349))	Acanthamoeba castellanii str. Neff	14926695
ACA1_074180	CDS	ACA1_074180	NW_004457722.1	42003	44603	D	encoded by transcript ACA1_074180A; HEAT repeat containing protein	join(<42003..42159,42283..42434,42529..42685,42770..42864,42959..43195,43292..43499,43571..43722,43787..43909,43984..44199,44269..44415,44505..44603)	Acanthamoeba castellanii str. Neff	14926696
ACA1_074190	CDS	ACA1_074190	NW_004457722.1	44879	45478	R	encoded by transcript ACA1_074190A; uncharacterized protein	complement(join(44879..44884,44966..45478))	Acanthamoeba castellanii str. Neff	14926697
ACA1_004400	CDS	ACA1_004400	NW_004457721.1	2391	3402	D	encoded by transcript ACA1_004400A; uncharacterized protein	join(2391..2537,2610..2675,2750..2983,3088..3402)	Acanthamoeba castellanii str. Neff	14926681
ACA1_004410	CDS	ACA1_004410	NW_004457721.1	3641	5384	D	encoded by transcript ACA1_004410A; Fbox domain containing protein	join(3641..3778,3893..4060,4208..4531,5082..5384)	Acanthamoeba castellanii str. Neff	14926679
ACA1_004520	CDS	ACA1_004520	NW_004457721.1	5577	5959	D	encoded by transcript ACA1_004520A; uncharacterized protein	join(5577..5891,5945..5959)	Acanthamoeba castellanii str. Neff	14926680
ACA1_004630	CDS	ACA1_004630	NW_004457721.1	7796	9847	R	encoded by transcript ACA1_004630A; uncharacterized protein	complement(join(<7796..7880,7978..8164,8194..8262,8370..8645,8722..9069,9178..9227,9313..9675,9807..9847))	Acanthamoeba castellanii str. Neff	14926676
ACA1_004640	CDS	ACA1_004640	NW_004457721.1	10109	11606	D	encoded by transcript ACA1_004640A; SET domain containing protein	join(10109..10147,10209..10325,10442..10539,10623..10714,10834..10914,10984..11051,11172..11291,11403..>11606)	Acanthamoeba castellanii str. Neff	14926677
ACA1_004750	CDS	ACA1_004750	NW_004457721.1	15353	16275	R	encoded by transcript ACA1_004750A; saccharopine dehydrogenase	complement(join(15353..15381,15419..15597,15720..15812,15956..16275))	Acanthamoeba castellanii str. Neff	14926678
ACA1_306230	CDS	ACA1_306230	NW_004457720.1	7697	8176	D	encoded by transcript ACA1_306230A; phosphoinositide3-kinase, catalytic, gamma polypeptide, putative	join(<7697..7804,7878..7957,8062..>8176)	Acanthamoeba castellanii str. Neff	14926674
ACA1_306340	CDS	ACA1_306340	NW_004457720.1	14326	15876	R	encoded by transcript ACA1_306340A; uncharacterized protein	complement(join(<14326..14377,14558..14628,14707..14801,14882..14903,14987..15095,15240..15309,15405..15497,15559..15664,15754..15876))	Acanthamoeba castellanii str. Neff	14926675
ACA1_027730	CDS	ACA1_027730	NW_004457719.1	122	1171	R	encoded by transcript ACA1_027730A; Fbox domain containing protein	complement(join(<122..252,353..431,571..870,953..966,1003..1171))	Acanthamoeba castellanii str. Neff	14926672
ACA1_027740	CDS	ACA1_027740	NW_004457719.1	1844	2395	D	encoded by transcript ACA1_027740A; uncharacterized protein	1844..2395	Acanthamoeba castellanii str. Neff	14926661
ACA1_027750	CDS	ACA1_027750	NW_004457719.1	2781	3522	D	encoded by transcript ACA1_027750A; peroxiredoxin, putative	join(2781..2888,2967..3267,3344..3522)	Acanthamoeba castellanii str. Neff	14926662
ACA1_027760	CDS	ACA1_027760	NW_004457719.1	3666	4706	R	encoded by transcript ACA1_027760A; uncharacterized protein	complement(join(3666..3740,3846..4123,4198..4214,4341..4491,4577..4706))	Acanthamoeba castellanii str. Neff	14926663
ACA1_027770	CDS	ACA1_027770	NW_004457719.1	5711	7193	D	encoded by transcript ACA1_027770A; GATA zinc finger domain containing protein	join(5711..5776,5876..6200,6401..6926,7013..7193)	Acanthamoeba castellanii str. Neff	14926664
ACA1_027780	CDS	ACA1_027780	NW_004457719.1	8030	17363	D	encoded by transcript ACA1_027780A; RasGEF domain containing protein	join(8030..8117,8242..8558,8661..8790,8882..9014,9165..9625,9727..9890,10004..10118,10167..10376,10465..10533,10617..10737,10863..10967,11103..11280,11357..11458,11545..11640,11722..11837,12005..12214,12298..12420,12522..12633,12743..12977,13063..13190,13286..13357,13472..13621,13749..13923,14032..14120,14200..14664,14741..14884,14958..15026,15137..15272,15383..15622,15764..15902,15974..16490,16601..16717,16796..16893,16984..17116,17226..17363)	Acanthamoeba castellanii str. Neff	14926665
ACA1_027790	CDS	ACA1_027790	NW_004457719.1	17952	18995	D	encoded by transcript ACA1_027790A; protein SEQ ID from patent family protein	join(17952..18139,18303..18879,18963..18995)	Acanthamoeba castellanii str. Neff	14926666
ACA1_027800	CDS	ACA1_027800	NW_004457719.1	19689	22259	R	encoded by transcript ACA1_027800A; pentatricopeptide repeat domain containing protein	complement(join(19689..20150,20219..20275,20364..20429,20513..20699,20863..21614,21742..21896,22010..22259))	Acanthamoeba castellanii str. Neff	14926667
ACA1_027810	CDS	ACA1_027810	NW_004457719.1	22438	26301	D	encoded by transcript ACA1_027810A; uncharacterized protein	join(22438..22635,22764..22894,22986..23154,23223..23314,23406..23496,23602..23718,23847..23984,24107..24275,24432..24520,24599..24694,24803..24936,25026..25119,25221..25305,25417..25964,26128..26301)	Acanthamoeba castellanii str. Neff	14926668
ACA1_027820	CDS	ACA1_027820	NW_004457719.1	26657	27031	R	encoded by transcript ACA1_027820A; uncharacterized protein	complement(26657..27031)	Acanthamoeba castellanii str. Neff	14926669
ACA1_027830	CDS	ACA1_027830	NW_004457719.1	27363	33127	R	encoded by transcript ACA1_027830A; RhoGEF domain containing protein	complement(join(27363..27999,28088..28841,28925..29191,29290..29496,29572..30248,30334..30557,30660..30821,30908..31003,31075..31158,31253..31378,31488..31626,31709..31857,31966..32050,32149..32233,32319..32392,32524..32603,32700..32816,32927..32976,33100..33127))	Acanthamoeba castellanii str. Neff	14926670
ACA1_027840	CDS	ACA1_027840	NW_004457719.1	33454	35051	R	encoded by transcript ACA1_027840A; RNA polymerase III RPC4 protein	complement(join(33454..33552,33649..33708,33795..33902,33998..34108,34178..34270,34443..34549,34638..34720,34809..34866,34949..>35051))	Acanthamoeba castellanii str. Neff	14926671
ACA1_350360	CDS	ACA1_350360	NW_004457717.1	6784	7413	R	encoded by transcript ACA1_350360A; uncharacterized protein	complement(join(6784..6872,7109..7306,7383..7413))	Acanthamoeba castellanii str. Neff	14926659
ACA1_350370	CDS	ACA1_350370	NW_004457717.1	9065	9540	D	encoded by transcript ACA1_350370A; uncharacterized protein	join(9065..9271,9409..9540)	Acanthamoeba castellanii str. Neff	14926655
ACA1_350480	CDS	ACA1_350480	NW_004457717.1	12032	13493	D	encoded by transcript ACA1_350480A; ABC2 type transporter superfamily protein	join(12032..12049,12106..12237,12363..12483,12586..12781,12905..13014,13110..13204,13287..13493)	Acanthamoeba castellanii str. Neff	14926656
ACA1_350490	CDS	ACA1_350490	NW_004457717.1	13581	16358	R	encoded by transcript ACA1_350490A; uncharacterized protein	complement(join(13581..13700,13851..14944,15100..15198,15353..15442,15534..15769,15869..15963,16056..16132,16241..16358))	Acanthamoeba castellanii str. Neff	14926657
ACA1_350600	CDS	ACA1_350600	NW_004457717.1	23175	23504	D	encoded by transcript ACA1_350600A; uncharacterized protein	join(23175..23239,23330..23504)	Acanthamoeba castellanii str. Neff	14926658
ACA1_002610	CDS	ACA1_002610	NW_004457716.1	2806	3396	D	encoded by transcript ACA1_002610A; uncharacterized protein	join(2806..2862,2924..3043,3117..3306,3377..3396)	Acanthamoeba castellanii str. Neff	14926654
ACA1_002620	CDS	ACA1_002620	NW_004457716.1	3714	6285	D	encoded by transcript ACA1_002620A; Fbox domain containing protein	join(3714..3763,3868..4036,4133..4216,4328..4435,4654..4713,4781..4839,4932..4998,5131..5262,5388..5438,5506..5590,5681..5797,5866..5955,6056..6285)	Acanthamoeba castellanii str. Neff	14926652
ACA1_002630	CDS	ACA1_002630	NW_004457716.1	6489	10291	R	encoded by transcript ACA1_002630A; uncharacterized protein	complement(join(6489..6617,6716..6836,6955..7238,7334..7456,7613..7726,7852..7965,8064..8243,8343..8607,8673..9522,9617..9739,9823..10291))	Acanthamoeba castellanii str. Neff	14926653
ACA1_099360	CDS	ACA1_099360	NW_004457714.1	39	500	R	encoded by transcript ACA1_099360A; uncharacterized protein	complement(join(<39..129,285..356,433..500))	Acanthamoeba castellanii str. Neff	14926651
ACA1_099370	CDS	ACA1_099370	NW_004457714.1	568	1094	R	encoded by transcript ACA1_099370A; uncharacterized protein	complement(join(568..653,789..887,1049..1094))	Acanthamoeba castellanii str. Neff	14926643
ACA1_099480	CDS	ACA1_099480	NW_004457714.1	1303	2642	D	encoded by transcript ACA1_099480A; methenyltetrahydrofolate cyclohydrolase	join(1303..1426,1530..1549,1626..1702,1779..1918,2038..2144,2224..2293,2380..2493,2578..2642)	Acanthamoeba castellanii str. Neff	14926644
ACA1_099490	CDS	ACA1_099490	NW_004457714.1	2667	3951	R	encoded by transcript ACA1_099490A; survival protein SurE subfamily protein	complement(join(2667..2825,2920..3045,3164..3246,3494..3622,3692..3926,3943..3951))	Acanthamoeba castellanii str. Neff	14926645
ACA1_099600	CDS	ACA1_099600	NW_004457714.1	9903	10319	D	encoded by transcript ACA1_099600A; uncharacterized protein	join(9903..10035,10114..10319)	Acanthamoeba castellanii str. Neff	14926646
ACA1_099610	CDS	ACA1_099610	NW_004457714.1	11687	12225	R	encoded by transcript ACA1_099610A; ankyrin repeat-containing protein	complement(join(11687..11892,12006..12225))	Acanthamoeba castellanii str. Neff	14926647
ACA1_099720	CDS	ACA1_099720	NW_004457714.1	13424	13862	D	encoded by transcript ACA1_099720A; dolichylphosphate mannosyltransferase polypeptide 2, putative	join(13424..13525,13602..13666,13733..13862)	Acanthamoeba castellanii str. Neff	14926648
ACA1_099730	CDS	ACA1_099730	NW_004457714.1	14030	14476	D	encoded by transcript ACA1_099730A; uncharacterized protein	join(14030..14087,14179..14335,14434..14476)	Acanthamoeba castellanii str. Neff	14926649
ACA1_099740	CDS	ACA1_099740	NW_004457714.1	18160	19478	R	encoded by transcript ACA1_099740A; cholinesterase	complement(join(18160..18449,18528..18722,18822..18906,18997..19101,19235..19364,19459..19478))	Acanthamoeba castellanii str. Neff	14926650
ACA1_287210	CDS	ACA1_287210	NW_004457712.1	1417	2465	D	encoded by transcript ACA1_287210A; phospholipase d p2, putative	join(1417..1587,1669..1861,1947..2090,2146..2264,2343..2465)	Acanthamoeba castellanii str. Neff	14926642
ACA1_287220	CDS	ACA1_287220	NW_004457712.1	2516	6840	D	encoded by transcript ACA1_287220A; phospholipase D active site domain containing protein	join(2516..2788,2876..2963,3137..3189,3211..4394,4496..4589,4678..4738,4835..4947,5044..5192,5269..5333,5403..5565,5628..6635,6714..6840)	Acanthamoeba castellanii str. Neff	14926084
ACA1_287230	CDS	ACA1_287230	NW_004457712.1	7294	7849	D	encoded by transcript ACA1_287230A; uncharacterized protein	join(7294..7536,7691..7849)	Acanthamoeba castellanii str. Neff	14926085
ACA1_287240	CDS	ACA1_287240	NW_004457712.1	8041	9401	D	encoded by transcript ACA1_287240A; WH1 domain containing protein	join(8041..8200,8319..8533,9192..9401)	Acanthamoeba castellanii str. Neff	14926086
ACA1_287350	CDS	ACA1_287350	NW_004457712.1	9518	14389	R	encoded by transcript ACA1_287350A; His Kinase A (phosphoacceptor) domain containing protein	complement(join(9518..9754,9826..11705,11826..11909,12004..12095,12211..12464,12532..12717,12816..12907,13011..13195,13296..13375,13494..13600,13697..13796,13884..13931,14005..14076,14145..14287,14353..14389))	Acanthamoeba castellanii str. Neff	14926087
ACA1_287360	CDS	ACA1_287360	NW_004457712.1	15281	17074	R	encoded by transcript ACA1_287360A; Tartrateresistant acid phosphatase type 5, putative	complement(join(15281..15432,15616..15729,15912..16133,16211..16360,16569..16651,16738..16846,17005..17074))	Acanthamoeba castellanii str. Neff	14926088
ACA1_287370	CDS	ACA1_287370	NW_004457712.1	17778	20810	R	encoded by transcript ACA1_287370A; acetate-CoA ligase	complement(join(17778..17839,17946..18021,18088..18132,18201..18361,18445..18465,18589..18792,18891..19063,19140..19290,19360..19458,19540..19738,19816..19994,20075..20192,20278..20472,20619..20810))	Acanthamoeba castellanii str. Neff	14926089
ACA1_287380	CDS	ACA1_287380	NW_004457712.1	21010	22432	R	encoded by transcript ACA1_287380A; Dolichylphosphate beta-glucosyltransferase	complement(join(21010..21138,21212..21276,21366..21507,21577..21651,21729..21827,21910..22299,22382..22432))	Acanthamoeba castellanii str. Neff	14926090
ACA1_287490	CDS	ACA1_287490	NW_004457712.1	22923	23159	R	encoded by transcript ACA1_287490A; uncharacterized protein	complement(<22923..23159)	Acanthamoeba castellanii str. Neff	14926091
ACA1_287500	CDS	ACA1_287500	NW_004457712.1	22998	23186	D	encoded by transcript ACA1_287500A; uncharacterized protein	<22998..23186	Acanthamoeba castellanii str. Neff	14926093
ACA1_287510	CDS	ACA1_287510	NW_004457712.1	23515	26085	R	encoded by transcript ACA1_287510A; peptidylprolyl isomeraselike 2, putative	complement(join(23515..23781,23854..23976,24049..24175,24259..24410,24502..24651,24723..24944,25017..25170,25257..25300,25371..25462,25547..25689,25761..25928,26060..26085))	Acanthamoeba castellanii str. Neff	14926092
ACA1_287520	CDS	ACA1_287520	NW_004457712.1	26372	29458	R	encoded by transcript ACA1_287520A; fucosylgalactoside 3-alpha-galactosyltransferase	complement(join(26372..26800,26898..27009,27088..27155,27225..27321,27394..27486,27593..27815,27905..27986,28056..28177,28264..29458))	Acanthamoeba castellanii str. Neff	14926094
ACA1_287530	CDS	ACA1_287530	NW_004457712.1	30114	31486	R	encoded by transcript ACA1_287530A; cellulose binding domain containing protein	complement(join(30114..31363,31429..31486))	Acanthamoeba castellanii str. Neff	14926095
ACA1_287540	CDS	ACA1_287540	NW_004457712.1	31963	33220	R	encoded by transcript ACA1_287540A; uncharacterized protein	complement(join(31963..32133,32205..32340,32430..33220))	Acanthamoeba castellanii str. Neff	14926096
ACA1_287550	CDS	ACA1_287550	NW_004457712.1	33353	36752	R	encoded by transcript ACA1_287550A; protein kinase family protein, putative	complement(join(33353..33463,33553..33628,33704..33802,33889..33981,34051..34183,34271..34385,34473..34542,34611..34731,34833..35010,35088..35468,35663..35713,36084..36752))	Acanthamoeba castellanii str. Neff	14926097
ACA1_287560	CDS	ACA1_287560	NW_004457712.1	37053	37574	D	encoded by transcript ACA1_287560A; AP2 complex subunit sigma, putative	join(37053..37220,37314..37574)	Acanthamoeba castellanii str. Neff	14926098
ACA1_287570	CDS	ACA1_287570	NW_004457712.1	37708	39557	D	encoded by transcript ACA1_287570A; uncharacterized protein	join(37708..38077,38166..38251,38328..38466,38544..38572,38635..38724,38822..38851,38913..38995,39021..39090,39165..39557)	Acanthamoeba castellanii str. Neff	14926099
ACA1_287580	CDS	ACA1_287580	NW_004457712.1	39726	40685	D	encoded by transcript ACA1_287580A; plexin repeat domain containing protein	join(39726..40182,40390..40685)	Acanthamoeba castellanii str. Neff	14926100
ACA1_287590	CDS	ACA1_287590	NW_004457712.1	41293	42323	D	encoded by transcript ACA1_287590A; uncharacterized protein	join(41293..41331,41397..41662,41752..41942,42022..42323)	Acanthamoeba castellanii str. Neff	14926101
ACA1_287600	CDS	ACA1_287600	NW_004457712.1	44872	46219	R	encoded by transcript ACA1_287600A; RFX DNAbinding domain containing protein	complement(join(44872..45702,45852..46044,46125..46219))	Acanthamoeba castellanii str. Neff	14926102
ACA1_287610	CDS	ACA1_287610	NW_004457712.1	47513	48978	D	encoded by transcript ACA1_287610A; RFX DNAbinding domain containing protein	join(47513..47607,47717..47851,48063..48978)	Acanthamoeba castellanii str. Neff	14926103
ACA1_287620	CDS	ACA1_287620	NW_004457712.1	49948	50427	D	encoded by transcript ACA1_287620A; uncharacterized protein	join(49948..50149,50222..50350,50384..50427)	Acanthamoeba castellanii str. Neff	14926104
ACA1_287630	CDS	ACA1_287630	NW_004457712.1	50627	52168	D	encoded by transcript ACA1_287630A; uncharacterized protein	join(50627..50742,50816..50843,51175..51216,51304..51401,51459..51561,51646..51885,51966..52026,52098..52168)	Acanthamoeba castellanii str. Neff	14926105
ACA1_287640	CDS	ACA1_287640	NW_004457712.1	52268	53934	R	encoded by transcript ACA1_287640A; uncharacterized protein	complement(join(52268..52604,52697..53934))	Acanthamoeba castellanii str. Neff	14926106
ACA1_287650	CDS	ACA1_287650	NW_004457712.1	54134	55891	D	encoded by transcript ACA1_287650A; uncharacterized protein	join(54134..54312,54435..55021,55135..55335,55449..55891)	Acanthamoeba castellanii str. Neff	14926107
ACA1_287660	CDS	ACA1_287660	NW_004457712.1	56103	57836	D	encoded by transcript ACA1_287660A; pentapeptide repeatcontaining protein	join(56103..56448,56655..56714,56804..56863,56948..57007,57074..57133,57199..57258,57336..57395,57459..57518,57721..57836)	Acanthamoeba castellanii str. Neff	14926108
ACA1_287680	CDS	ACA1_287680	NW_004457712.1	62749	63406	D	encoded by transcript ACA1_287680A; tubulin folding cofactor C, putative	join(62749..62819,62878..62980,63062..63193,63254..63406)	Acanthamoeba castellanii str. Neff	14926110
ACA1_287700	CDS	ACA1_287700	NW_004457712.1	64981	65586	D	encoded by transcript ACA1_287700A; lethal (1), putative	64981..65586	Acanthamoeba castellanii str. Neff	14926112
ACA1_287710	CDS	ACA1_287710	NW_004457712.1	65799	67145	D	encoded by transcript ACA1_287710A; MutT domain protein-like family protein	join(65799..65910,65974..66065,66127..66234,66303..66386,66474..66562,66756..66846,66907..66940,67012..67145)	Acanthamoeba castellanii str. Neff	14926113
ACA1_287720	CDS	ACA1_287720	NW_004457712.1	67171	67970	R	encoded by transcript ACA1_287720A; pyridoxamine 5'phosphate oxidase family superfamily protein	complement(join(67171..67279,67349..67433,67507..67672,67736..67808,67864..67970))	Acanthamoeba castellanii str. Neff	14926114
ACA1_287730	CDS	ACA1_287730	NW_004457712.1	68112	70469	R	encoded by transcript ACA1_287730A; peptidase M16 inactive domain containing protein	complement(join(68112..68288,68375..68487,68573..68719,68790..68899,68986..69062,69167..69272,69354..69654,69754..69846,69953..70067,70134..>70469))	Acanthamoeba castellanii str. Neff	14926115
ACA1_287740	CDS	ACA1_287740	NW_004457712.1	70720	71310	R	encoded by transcript ACA1_287740A; uncharacterized protein	complement(join(70720..70746,70805..70899,70972..71083,71146..71310))	Acanthamoeba castellanii str. Neff	14926116
ACA1_287750	CDS	ACA1_287750	NW_004457712.1	71454	72267	D	encoded by transcript ACA1_287750A; Sas10/Utp3/C1D family protein	join(71454..71655,71724..71779,71872..71923,71991..72065,72134..72267)	Acanthamoeba castellanii str. Neff	14926117
ACA1_287760	CDS	ACA1_287760	NW_004457712.1	72317	73188	R	encoded by transcript ACA1_287760A; jumonji domain containing 6, putative	complement(join(72317..72487,72579..72663,72738..72786,72852..72896,72959..73091,73156..73188))	Acanthamoeba castellanii str. Neff	14926118
ACA1_287770	CDS	ACA1_287770	NW_004457712.1	73820	74836	R	encoded by transcript ACA1_287770A; uncharacterized protein	complement(join(73820..73990,74055..74117,74285..74410,74581..74680,74733..74836))	Acanthamoeba castellanii str. Neff	14926119
ACA1_287780	CDS	ACA1_287780	NW_004457712.1	75471	78045	D	encoded by transcript ACA1_287780A; IWS1 Cterminus domain containing protein	join(75471..76457,76555..76671,76764..76856,76945..77066,77165..77263,77340..77576,77649..77801,77868..78045)	Acanthamoeba castellanii str. Neff	14926120
ACA1_287790	CDS	ACA1_287790	NW_004457712.1	79189	81052	R	encoded by transcript ACA1_287790A; uncharacterized protein	complement(join(79189..79382,79615..79642,79718..79811,79882..79994,80086..80215,80304..80419,80538..80658,80737..80807,80864..81052))	Acanthamoeba castellanii str. Neff	14926121
ACA1_287800	CDS	ACA1_287800	NW_004457712.1	81241	83089	R	encoded by transcript ACA1_287800A; uncharacterized protein	complement(join(81241..81909,82056..82292,82369..82485,82557..83014,83059..83089))	Acanthamoeba castellanii str. Neff	14926122
ACA1_287810	CDS	ACA1_287810	NW_004457712.1	84006	85612	D	encoded by transcript ACA1_287810A; HemolysinIII related subfamily protein	join(84006..84082,84166..84248,84328..84448,84575..84712,84818..84899,85019..85064,85138..85211,85324..85404,85502..85612)	Acanthamoeba castellanii str. Neff	14926123
ACA1_287820	CDS	ACA1_287820	NW_004457712.1	86359	90069	D	encoded by transcript ACA1_287820A; transketolase	join(86359..86411,86509..86626,86815..86916,86990..87080,87185..87400,87567..87740,87843..88108,88205..88271,88362..88526,88599..88714,88801..89001,89076..89234,89315..89416,89474..89554,89754..89837,89947..90069)	Acanthamoeba castellanii str. Neff	14926124
ACA1_287830	CDS	ACA1_287830	NW_004457712.1	90255	91532	R	encoded by transcript ACA1_287830A; RFX DNAbinding domain containing protein	complement(join(90255..91116,91184..91318,91384..91532))	Acanthamoeba castellanii str. Neff	14926125
ACA1_287840	CDS	ACA1_287840	NW_004457712.1	92019	93761	R	encoded by transcript ACA1_287840A; uncharacterized protein	complement(join(92019..92969,93212..93350,93590..93630,93726..93761))	Acanthamoeba castellanii str. Neff	14926126
ACA1_287850	CDS	ACA1_287850	NW_004457712.1	94396	97580	R	encoded by transcript ACA1_287850A; zinc finger, C3HC4 type (RING finger) domain containing protein	complement(join(94396..94593,94722..94819,94894..95270,95345..95661,95726..95797,95883..95936,95973..96149,96241..96448,96522..96594,96670..96746,96817..97004,97086..97580))	Acanthamoeba castellanii str. Neff	14926127
ACA1_287860	CDS	ACA1_287860	NW_004457712.1	98124	107886	D	encoded by transcript ACA1_287860A; uncharacterized protein	join(98124..98491,98593..98806,98894..99044,99132..99522,99591..99618,99631..99739,99815..100056,100138..100423,100499..100833,100907..101002,101081..101287,101378..101545,101781..101925,101997..103640,103727..103924,104001..104362,104436..104510,104588..104736,104828..105020,105116..105280,105357..105515,105585..105894,105996..106138,106229..106342,106434..106715,106895..107199,107302..107425,107532..107669,107758..107886)	Acanthamoeba castellanii str. Neff	14926128
ACA1_287870	CDS	ACA1_287870	NW_004457712.1	108325	113540	D	encoded by transcript ACA1_287870A; domain found in dishevelled, egl10, and pleckstrin domain containing protein	join(108325..108388,108424..108430,108513..108586,108691..108812,108917..109003,109116..109227,109339..109398,109476..109539,109633..109705,109878..109997,110111..110221,110390..111417,111441..111519,111936..112115,112238..112376,112481..112568,112653..112725,112805..112846,112944..113102,113181..113264,113355..113540)	Acanthamoeba castellanii str. Neff	14926129
ACA1_287880	CDS	ACA1_287880	NW_004457712.1	113699	116420	R	encoded by transcript ACA1_287880A; ATPase/histidine kinase/DNA gyrase B/HSP90 domain containing protein	complement(join(113699..114187,114266..114368,114440..114591,114657..114740,114822..115006,115115..115251,115342..115474,115695..115807,115888..115957,116087..116224,116297..116420))	Acanthamoeba castellanii str. Neff	14926130
ACA1_287890	CDS	ACA1_287890	NW_004457712.1	117555	119878	R	encoded by transcript ACA1_287890A; Fbox domain containing protein	complement(join(117555..117994,118068..118284,118365..119080,119158..119514,119592..119652,119738..119878))	Acanthamoeba castellanii str. Neff	14926131
ACA1_287900	CDS	ACA1_287900	NW_004457712.1	119999	122254	R	encoded by transcript ACA1_287900A; ATPase/histidine kinase/DNA gyrase B/HSP90 domain containing protein	complement(join(119999..120424,120589..120691,120770..120897,120984..121055,121153..121211,121310..121435,121520..121656,121720..121852,121926..121955,122034..122140,122226..122254))	Acanthamoeba castellanii str. Neff	14926132
ACA1_287910	CDS	ACA1_287910	NW_004457712.1	123738	125061	D	encoded by transcript ACA1_287910A; PH domain containing protein	join(123738..123785,124004..124216,124328..124430,124501..124576,124647..125061)	Acanthamoeba castellanii str. Neff	14926133
ACA1_287920	CDS	ACA1_287920	NW_004457712.1	125446	127460	R	encoded by transcript ACA1_287920A; Leucinerich repeat protein lrrA, putative	complement(join(125446..125484,125556..125694,125784..125965,126071..126338,126425..126705,126846..127460))	Acanthamoeba castellanii str. Neff	14926134
ACA1_287930	CDS	ACA1_287930	NW_004457712.1	127629	127955	D	encoded by transcript ACA1_287930A; uncharacterized protein	join(<127629..127688,127809..>127955)	Acanthamoeba castellanii str. Neff	14926135
ACA1_287940	CDS	ACA1_287940	NW_004457712.1	128278	131274	R	encoded by transcript ACA1_287940A; conditioned medium factor, putative	complement(join(128278..128486,128580..128708,128799..128931,129054..129434,129521..129837,129915..130194,130290..130471,130561..130633,130744..131074,131192..131274))	Acanthamoeba castellanii str. Neff	14926136
ACA1_287950	CDS	ACA1_287950	NW_004457712.1	131575	132490	R	encoded by transcript ACA1_287950A; uncharacterized protein	complement(join(131575..131726,131838..132024,132104..132218,132314..132374,132487..132490))	Acanthamoeba castellanii str. Neff	14926137
ACA1_287960	CDS	ACA1_287960	NW_004457712.1	132589	134339	R	encoded by transcript ACA1_287960A; SET and MYND domain containing 3, putative	complement(join(132589..132896,132975..133181,133259..133287,133417..133516,133579..133699,133776..133903,133971..134079,134161..134226,134310..134339))	Acanthamoeba castellanii str. Neff	14926138
ACA1_287970	CDS	ACA1_287970	NW_004457712.1	134947	137397	D	encoded by transcript ACA1_287970A; RasGEF domain containing protein	join(134947..135202,135286..135301,135433..135486,135652..135687,135825..135918,136022..136161,136237..136383,136418..136550,136626..136718,136789..136921,137004..137080,137158..137226,137299..137397)	Acanthamoeba castellanii str. Neff	14926139
ACA1_287980	CDS	ACA1_287980	NW_004457712.1	137826	140947	D	encoded by transcript ACA1_287980A; uncharacterized protein	join(137826..138398,138473..138528,138539..138689,138762..138807,138876..139386,139478..139513,139579..139876,139948..140160,140246..140947)	Acanthamoeba castellanii str. Neff	14926140
ACA1_287990	CDS	ACA1_287990	NW_004457712.1	141254	142218	D	encoded by transcript ACA1_287990A; singlestrand selective monofunctional uracil DNA glycosylase	join(141254..141494,141581..142218)	Acanthamoeba castellanii str. Neff	14926141
ACA1_288000	CDS	ACA1_288000	NW_004457712.1	142729	144673	D	encoded by transcript ACA1_288000A; NEDD8activating enzyme E1 catalytic subunit	join(142729..142851,142972..143086,143144..143297,143386..143573,143672..143940,144053..144396,144496..144673)	Acanthamoeba castellanii str. Neff	14926142
ACA1_288010	CDS	ACA1_288010	NW_004457712.1	144845	146274	R	encoded by transcript ACA1_288010A; uncharacterized protein	complement(join(144845..145031,145102..145177,145253..145378,145660..145739,145821..145953,146022..146274))	Acanthamoeba castellanii str. Neff	14926143
ACA1_288020	CDS	ACA1_288020	NW_004457712.1	146422	147139	R	encoded by transcript ACA1_288020A; cysteine dioxygenase	complement(join(146422..146799,146855..147139))	Acanthamoeba castellanii str. Neff	14926144
ACA1_288030	CDS	ACA1_288030	NW_004457712.1	149238	149837	D	encoded by transcript ACA1_288030A; uncharacterized protein	join(149238..149469,149538..149611,149724..149837)	Acanthamoeba castellanii str. Neff	14926145
ACA1_288040	CDS	ACA1_288040	NW_004457712.1	150062	151378	R	encoded by transcript ACA1_288040A; uncharacterized protein	complement(join(150062..150991,151119..151204,151294..151378))	Acanthamoeba castellanii str. Neff	14926146
ACA1_288050	CDS	ACA1_288050	NW_004457712.1	152000	153175	D	encoded by transcript ACA1_288050A; YvrD, putative	join(152000..152026,152088..152208,152278..152483,152583..152740,152816..152928,152991..153175)	Acanthamoeba castellanii str. Neff	14926147
ACA1_288160	CDS	ACA1_288160	NW_004457712.1	154022	154406	R	encoded by transcript ACA1_288160A; uncharacterized protein	complement(join(154022..154213,154380..154406))	Acanthamoeba castellanii str. Neff	14926148
ACA1_288270	CDS	ACA1_288270	NW_004457712.1	156112	156659	D	encoded by transcript ACA1_288270A; uncharacterized protein	join(156112..156604,156649..156659)	Acanthamoeba castellanii str. Neff	14926149
ACA1_288280	CDS	ACA1_288280	NW_004457712.1	159544	160101	D	encoded by transcript ACA1_288280A; oxidoreductase, short chain dehydrogenase/reductase family	join(159544..159659,159738..159847,160043..160101)	Acanthamoeba castellanii str. Neff	14926150
ACA1_288290	CDS	ACA1_288290	NW_004457712.1	160269	162266	D	encoded by transcript ACA1_288290A; SH3 domain containing protein	join(160269..160883,160973..161048,161129..161245,161302..161733,161971..162032,162117..162266)	Acanthamoeba castellanii str. Neff	14926151
ACA1_288300	CDS	ACA1_288300	NW_004457712.1	162701	166606	D	encoded by transcript ACA1_288300A; uncharacterized protein	join(162701..162922,163066..165552,165620..166606)	Acanthamoeba castellanii str. Neff	14926152
ACA1_288310	CDS	ACA1_288310	NW_004457712.1	166697	167847	R	encoded by transcript ACA1_288310A; uncharacterized protein	complement(join(166697..166872,166973..167108,167164..167387,167511..167686,167837..167847))	Acanthamoeba castellanii str. Neff	14926153
ACA1_288320	CDS	ACA1_288320	NW_004457712.1	167928	170079	D	encoded by transcript ACA1_288320A; signal peptide binding domain containing protein	join(167928..168158,168299..168703,168781..168929,169013..169113,169204..169343,169427..169555,169637..169795,169903..170079)	Acanthamoeba castellanii str. Neff	14926154
ACA1_288330	CDS	ACA1_288330	NW_004457712.1	170290	171197	D	encoded by transcript ACA1_288330A; uncharacterized protein	join(170290..170465,170550..170677,170771..170884,170979..171034,171099..171197)	Acanthamoeba castellanii str. Neff	14926155
ACA1_288340	CDS	ACA1_288340	NW_004457712.1	171532	174391	D	encoded by transcript ACA1_288340A; conditioned medium factor, putative	join(171532..171753,171837..172025,172112..172450,172530..172731,172799..172872,172942..173109,173209..173430,173499..173669,173772..173904,173985..174113,174183..174391)	Acanthamoeba castellanii str. Neff	14926156
ACA1_288350	CDS	ACA1_288350	NW_004457712.1	174543	175776	R	encoded by transcript ACA1_288350A; transcriptional regulator, Sir2 family protein	complement(join(174543..175616,175684..175776))	Acanthamoeba castellanii str. Neff	14926157
ACA1_288360	CDS	ACA1_288360	NW_004457712.1	176272	177613	D	encoded by transcript ACA1_288360A; ribosomal protein L4/L1 family	join(176272..176287,176380..176577,176593..176998,177073..177613)	Acanthamoeba castellanii str. Neff	14926158
ACA1_288370	CDS	ACA1_288370	NW_004457712.1	178238	180714	D	encoded by transcript ACA1_288370A; RasGEF domain containing protein	join(178238..178379,178539..178598,178676..178824,178898..179000,179094..179314,179408..179477,179571..179716,179802..179921,180070..180714)	Acanthamoeba castellanii str. Neff	14926159
ACA1_288380	CDS	ACA1_288380	NW_004457712.1	181003	187544	D	encoded by transcript ACA1_288380A; WD domain, G-beta repeat-containing protein	join(181003..181364,181477..181630,181707..181826,181910..181979,182103..182380,182468..182594,182690..182778,182865..183028,183129..183330,183380..183885,183971..184109,184178..184319,184408..184551,184641..184755,184858..184937,185005..185170,185250..185459,185558..185673,185761..185949,186038..186163,186264..186515,186591..186699,186779..186910,186994..187115,187186..187544)	Acanthamoeba castellanii str. Neff	14926160
ACA1_288390	CDS	ACA1_288390	NW_004457712.1	187609	193867	R	encoded by transcript ACA1_288390A; TBC domain containing protein	complement(join(187609..188233,188339..188483,188570..188674,188743..189106,189193..189360,189463..189590,189707..189839,189932..190054,190149..190270,190345..190468,190554..190635,190745..190887,190989..191057,191143..191274,191380..191495,191584..192046,192154..192366,192421..192629,192722..192970,193061..193157,193247..193620,193705..193867))	Acanthamoeba castellanii str. Neff	14926161
ACA1_288400	CDS	ACA1_288400	NW_004457712.1	194868	198980	D	encoded by transcript ACA1_288400A; Dual specificity protein kinase shkB, putative	join(194868..195037,195153..195263,195332..195455,195529..195733,195817..195996,196067..196388,196465..196543,196641..196756,196847..197039,197121..197202,197310..197424,197475..197545,197640..197890,197989..198091,198170..198258,198343..198444,198526..198657,198753..198980)	Acanthamoeba castellanii str. Neff	14926162
ACA1_288410	CDS	ACA1_288410	NW_004457712.1	200034	202856	D	encoded by transcript ACA1_288410A; RhoGEF domain containing protein	join(200034..200343,200436..200593,200670..200753,200823..200921,201001..201108,201184..201260,201349..201526,201598..201738,201814..201873,201974..202130,202213..202302,202384..202481,202542..202856)	Acanthamoeba castellanii str. Neff	14926163
ACA1_288420	CDS	ACA1_288420	NW_004457712.1	203138	204077	R	encoded by transcript ACA1_288420A; uncharacterized protein	complement(join(203138..203560,203652..204077))	Acanthamoeba castellanii str. Neff	14926164
ACA1_288430	CDS	ACA1_288430	NW_004457712.1	204710	206083	R	encoded by transcript ACA1_288430A; acylCoA:diacylglycerol acyltransferase (DGAT), putative	complement(join(204710..204862,204979..205072,205172..205323,205409..205575,205637..205785,205883..205966,206037..206083))	Acanthamoeba castellanii str. Neff	14926165
ACA1_288440	CDS	ACA1_288440	NW_004457712.1	206466	207390	R	encoded by transcript ACA1_288440A; RhoGEF domain containing protein	complement(join(206466..206621,206704..206799,206861..206968,207029..207145,207197..207268,207334..207390))	Acanthamoeba castellanii str. Neff	14926166
ACA1_288450	CDS	ACA1_288450	NW_004457712.1	209232	210138	R	encoded by transcript ACA1_288450A; uncharacterized protein	complement(join(209232..209311,209430..209523,209595..209702,209923..210138))	Acanthamoeba castellanii str. Neff	14926167
ACA1_288460	CDS	ACA1_288460	NW_004457712.1	210437	211522	R	encoded by transcript ACA1_288460A; RFX DNAbinding domain containing protein	complement(join(210437..211280,211341..211522))	Acanthamoeba castellanii str. Neff	14926168
ACA1_288470	CDS	ACA1_288470	NW_004457712.1	212123	220876	D	encoded by transcript ACA1_288470A; neuroblastomaamplified protein, putative	join(212123..212302,212387..212696,212759..212860,212930..213042,213116..213571,213604..213778,213853..213951,214016..214110,214272..214342,214408..214512,214576..214678,214747..214846,214909..215029,215095..215189,215259..215480,215565..215759,215830..215977,216065..216530,216590..216733,216813..216919,217004..217175,217243..217309,217410..217527,217749..217838,217902..218034,218105..218209,218275..218404,218475..218655,218739..218910,218981..219145,219228..219325,219386..219529,219604..219700,219795..219905,219972..220153,220285..220816,220835..220876)	Acanthamoeba castellanii str. Neff	14926169
ACA1_288480	CDS	ACA1_288480	NW_004457712.1	220951	221811	D	encoded by transcript ACA1_288480A; uncharacterized protein	join(<220951..220995,221098..221220,221293..221811)	Acanthamoeba castellanii str. Neff	14926170
ACA1_288490	CDS	ACA1_288490	NW_004457712.1	222109	222684	R	encoded by transcript ACA1_288490A; Ubiquitinconjugating enzyme subfamily protein	complement(join(222109..222129,222161..222288,222375..222684))	Acanthamoeba castellanii str. Neff	14926171
ACA1_288500	CDS	ACA1_288500	NW_004457712.1	222972	224770	D	encoded by transcript ACA1_288500A; PCI domain containing protein	join(222972..223134,223274..224094,224186..224404,224500..224612,224683..224770)	Acanthamoeba castellanii str. Neff	14926172
ACA1_288510	CDS	ACA1_288510	NW_004457712.1	226696	232672	D	encoded by transcript ACA1_288510A; SNF2 family Nterminal domain containing protein	join(226696..227160,227226..227494,227639..228020,228089..228225,228333..228495,228604..228813,228900..229166,229236..229524,229646..229998,230130..230669,230787..230883,230977..231202,231295..231410,231546..231806,231894..232672)	Acanthamoeba castellanii str. Neff	14926173
ACA1_288520	CDS	ACA1_288520	NW_004457712.1	232992	234427	R	encoded by transcript ACA1_288520A; uncharacterized protein	complement(join(232992..233202,233299..233362,233515..233895,233973..234243,234314..234427))	Acanthamoeba castellanii str. Neff	14926174
ACA1_288530	CDS	ACA1_288530	NW_004457712.1	234558	235477	D	encoded by transcript ACA1_288530A; polypeptide deformylase	join(234558..234849,234975..235067,235139..235300,235395..235477)	Acanthamoeba castellanii str. Neff	14926175
ACA1_288540	CDS	ACA1_288540	NW_004457712.1	235619	238165	R	encoded by transcript ACA1_288540A; WD repeat domain 70, putative	complement(join(235619..235865,235966..236206,236295..236366,236467..236655,236732..236882,236959..237152,237241..237317,237435..237673,237746..238165))	Acanthamoeba castellanii str. Neff	14926176
ACA1_288550	CDS	ACA1_288550	NW_004457712.1	238393	239308	R	encoded by transcript ACA1_288550A; uncharacterized protein	complement(join(238393..238417,238521..238634,238703..238829,238859..238946,239090..239308))	Acanthamoeba castellanii str. Neff	14926177
ACA1_288560	CDS	ACA1_288560	NW_004457712.1	239325	242233	R	encoded by transcript ACA1_288560A; ERCC4 domain containing protein	complement(join(239325..239766,239871..240046,240115..240998,241076..241217,241455..241572,241642..241793,241887..242140,242215..242233))	Acanthamoeba castellanii str. Neff	14926178
ACA1_288570	CDS	ACA1_288570	NW_004457712.1	244088	244929	R	encoded by transcript ACA1_288570A; uncharacterized protein	complement(join(244088..244147,244219..244299,244411..244472,244544..244682,244795..244929))	Acanthamoeba castellanii str. Neff	14926179
ACA1_288580	CDS	ACA1_288580	NW_004457712.1	245382	246371	D	encoded by transcript ACA1_288580A; uncharacterized protein	join(245382..245477,245550..245599,245665..245788,246021..246371)	Acanthamoeba castellanii str. Neff	14926180
ACA1_288590	CDS	ACA1_288590	NW_004457712.1	246517	247536	D	encoded by transcript ACA1_288590A; zinc finger, C3HC4 type (RING finger) domain containing protein	join(246517..246589,246758..246855,246932..247035,247103..247151,247244..247308,247389..247536)	Acanthamoeba castellanii str. Neff	14926181
ACA1_288600	CDS	ACA1_288600	NW_004457712.1	247645	248856	D	encoded by transcript ACA1_288600A; uncharacterized protein	join(247645..247835,247909..248522,248614..248717,248803..248856)	Acanthamoeba castellanii str. Neff	14926182
ACA1_288610	CDS	ACA1_288610	NW_004457712.1	249045	250642	R	encoded by transcript ACA1_288610A; serpin (serine proteinase inhibitor) superfamily protein	complement(join(249045..249150,249236..249396,249522..249798,249906..250129,250202..250591,250628..250642))	Acanthamoeba castellanii str. Neff	14926183
ACA1_288620	CDS	ACA1_288620	NW_004457712.1	250813	252642	R	encoded by transcript ACA1_288620A; uncharacterized protein	complement(join(250813..251051,251141..251668,251734..251844,251958..252642))	Acanthamoeba castellanii str. Neff	14926184
ACA1_288630	CDS	ACA1_288630	NW_004457712.1	252911	253797	R	encoded by transcript ACA1_288630A; uncharacterized protein	complement(join(252911..253003,253095..253292,253379..253569,253647..>253797))	Acanthamoeba castellanii str. Neff	14926185
ACA1_288640	CDS	ACA1_288640	NW_004457712.1	254068	254401	D	encoded by transcript ACA1_288640A; elongation factor 1, putative	join(254068..254248,254337..254401)	Acanthamoeba castellanii str. Neff	14926186
ACA1_288650	CDS	ACA1_288650	NW_004457712.1	254559	255279	R	encoded by transcript ACA1_288650A; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12, putative	complement(join(254559..254723,254826..254871,254950..255028,255114..255279))	Acanthamoeba castellanii str. Neff	14926187
ACA1_288660	CDS	ACA1_288660	NW_004457712.1	255390	256775	D	encoded by transcript ACA1_288660A; uncharacterized protein	join(255390..255515,255596..255645,255734..255791,255842..255931,255997..256082,256186..256315,256364..256501,256623..256775)	Acanthamoeba castellanii str. Neff	14926188
ACA1_288670	CDS	ACA1_288670	NW_004457712.1	256871	257742	R	encoded by transcript ACA1_288670A; Psf1 family protein	complement(join(256871..256976,257048..257118,257192..257269,257365..257449,257510..257617,257690..257742))	Acanthamoeba castellanii str. Neff	14926189
ACA1_288680	CDS	ACA1_288680	NW_004457712.1	258103	262439	D	encoded by transcript ACA1_288680A; uncharacterized protein	join(258103..258114,258370..258593,258666..258713,258795..258922,259021..259248,259347..259432,259514..259555,259632..259711,259796..259856,259951..260021,260129..260277,260450..260544,260586..260754,260893..260967,261091..261240,261350..261479,261557..261668,261793..261923,262034..262120,262313..262439)	Acanthamoeba castellanii str. Neff	14926190
ACA1_288690	CDS	ACA1_288690	NW_004457712.1	262460	264684	R	encoded by transcript ACA1_288690A; Platelet-activating factor acetylhydrolase, plasma/intracellular isoform II protein	complement(join(262460..262718,262796..262921,263012..263304,263364..263476,263557..263674,263779..264684))	Acanthamoeba castellanii str. Neff	14926191
ACA1_288700	CDS	ACA1_288700	NW_004457712.1	264796	267331	D	encoded by transcript ACA1_288700A; BRCA1 C Terminus (BRCT) domain containing protein	join(264796..265279,265363..266141,266220..266303,266372..266570,266760..266869,266951..267043,267143..267331)	Acanthamoeba castellanii str. Neff	14926192
ACA1_288710	CDS	ACA1_288710	NW_004457712.1	267540	270362	D	encoded by transcript ACA1_288710A; WD domain, G-beta repeat-containing protein	join(267540..267601,267685..267796,267891..267965,268063..268218,268274..268356,268433..268618,268696..269206,269315..269357,269466..269645,269726..270083,270185..270362)	Acanthamoeba castellanii str. Neff	14926193
ACA1_288720	CDS	ACA1_288720	NW_004457712.1	270428	271861	R	encoded by transcript ACA1_288720A; aldose 1epimerase subfamily protein	complement(join(270428..270561,270635..270837,270912..271044,271145..271226,271296..271558,271690..271861))	Acanthamoeba castellanii str. Neff	14926194
ACA1_288730	CDS	ACA1_288730	NW_004457712.1	272049	274632	R	encoded by transcript ACA1_288730A; esterase, PHB depolymerase subfamily protein	complement(join(272049..272348,272449..272527,272594..272630,272720..272792,272880..273046,273131..273290,273391..273728,273865..274016,274097..274190,274301..274388,274558..>274632))	Acanthamoeba castellanii str. Neff	14926195
ACA1_288740	CDS	ACA1_288740	NW_004457712.1	274917	276400	R	encoded by transcript ACA1_288740A; enoylCoA hydratase/isomerase family domain containing protein	complement(join(274917..275029,275118..275289,275346..275410,275498..275606,275686..275734,275822..275902,275998..276157,276253..276400))	Acanthamoeba castellanii str. Neff	14926196
ACA1_288750	CDS	ACA1_288750	NW_004457712.1	276579	278536	D	encoded by transcript ACA1_288750A; MORN repeatcontaining protein	join(276579..276705,276804..276928,277000..277093,277181..277347,277419..277902,277983..278147,278238..278536)	Acanthamoeba castellanii str. Neff	14926197
ACA1_288760	CDS	ACA1_288760	NW_004457712.1	278621	280252	R	encoded by transcript ACA1_288760A; uncharacterized protein	complement(join(278621..278768,278843..279138,279212..279580,279650..280252))	Acanthamoeba castellanii str. Neff	14926198
ACA1_288770	CDS	ACA1_288770	NW_004457712.1	282288	286606	R	encoded by transcript ACA1_288770A; leucine rich repeat domain containing protein	complement(join(282288..282499,282607..282771,282868..282935,283010..283181,283298..283384,283462..283597,283692..283798,283891..283973,284053..284213,284269..284378,284451..284738,284819..284914,285006..285181,285273..285414,285506..285613,285694..285800,285878..286035,286224..286295,286419..286547,286586..286606))	Acanthamoeba castellanii str. Neff	14926199
ACA1_288780	CDS	ACA1_288780	NW_004457712.1	287009	288080	D	encoded by transcript ACA1_288780A; base excision DNA repair protein, HhHGPD subfamily protein	join(287009..287032,287087..287131,287246..287306,287425..287651,287709..287822,287862..288080)	Acanthamoeba castellanii str. Neff	14926200
ACA1_288790	CDS	ACA1_288790	NW_004457712.1	288126	288541	R	encoded by transcript ACA1_288790A; uncharacterized protein	complement(join(288126..288215,288398..288541))	Acanthamoeba castellanii str. Neff	14926201
ACA1_288800	CDS	ACA1_288800	NW_004457712.1	289355	291936	D	encoded by transcript ACA1_288800A; transducin (beta) family 1X-linked, putative	join(289355..289412,289542..289687,289800..289939,290009..290149,290239..290389,290477..290540,290636..290794,290901..290971,291142..291216,291296..291477,291630..291693,291808..291936)	Acanthamoeba castellanii str. Neff	14926202
ACA1_288810	CDS	ACA1_288810	NW_004457712.1	292013	303072	R	encoded by transcript ACA1_288810A; leucine rich repeat domain containing protein	complement(join(292013..292516,292615..292757,292875..293136,293285..293464,293548..293974,294101..294296,294425..294512,294616..294758,294852..294954,295037..295110,295209..295544,295649..295819,295873..295993,296072..296219,296316..296407,296492..296544,296615..296913,297007..297089,297171..297504,297602..297709,297806..297911,297995..298105,298184..298275,298370..298495,298565..298963,299043..299733,299817..299966,300119..300250,300322..300402,300476..300548,300624..300952,301063..301476,301569..301771,301831..302021,302119..302309,302413..302601,302767..302908,303055..303072))	Acanthamoeba castellanii str. Neff	14926203
ACA1_288820	CDS	ACA1_288820	NW_004457712.1	303536	304100	D	encoded by transcript ACA1_288820A; uncharacterized protein	join(303536..303716,303811..304100)	Acanthamoeba castellanii str. Neff	14926204
ACA1_288830	CDS	ACA1_288830	NW_004457712.1	304260	306356	R	encoded by transcript ACA1_288830A; PH domain containing protein	complement(join(304260..305087,305170..305415,305508..306356))	Acanthamoeba castellanii str. Neff	14926205
ACA1_288840	CDS	ACA1_288840	NW_004457712.1	307099	308450	R	encoded by transcript ACA1_288840A; Saposin family type B, region 1 protein	complement(join(307099..307197,307278..307404,307478..307554,307641..307721,307789..307851,308053..308080,308248..308450))	Acanthamoeba castellanii str. Neff	14926206
ACA1_288850	CDS	ACA1_288850	NW_004457712.1	308699	313561	R	encoded by transcript ACA1_288850A; DNA polymerase I domain containing protein	complement(join(308699..308851,308921..309043,309115..309274,309350..309482,309571..309678,309741..309874,309959..310074,310192..310263,310348..310412,310504..310642,310720..310814,310944..311054,311127..311294,311383..311521,311589..311756,311835..312018,312114..313111,313142..313380,313450..313561))	Acanthamoeba castellanii str. Neff	14926207
ACA1_288860	CDS	ACA1_288860	NW_004457712.1	313764	316054	R	encoded by transcript ACA1_288860A; uncharacterized protein	complement(join(313764..314307,314352..314409,314509..314620,314838..314891,314963..315060,315306..315386,315580..315808,315893..316054))	Acanthamoeba castellanii str. Neff	14926208
ACA1_288870	CDS	ACA1_288870	NW_004457712.1	316175	317500	R	encoded by transcript ACA1_288870A; peroxisomal 2,4dienoyl-coa reductase	complement(join(316175..316356,316424..316570,316644..316783,316849..316888,316968..317135,317206..317265,317326..317500))	Acanthamoeba castellanii str. Neff	14926209
ACA1_288890	CDS	ACA1_288890	NW_004457712.1	321200	323772	D	encoded by transcript ACA1_288890A; protein kinase domain containing protein	join(321200..321220,321291..321336,321448..321628,321740..321880,321960..322076,322160..322256,322445..322879,322968..323556,323633..323772)	Acanthamoeba castellanii str. Neff	14926211
ACA1_288900	CDS	ACA1_288900	NW_004457712.1	324269	325558	D	encoded by transcript ACA1_288900A; uncharacterized protein	join(324269..325357,325469..325558)	Acanthamoeba castellanii str. Neff	14926212
ACA1_288910	CDS	ACA1_288910	NW_004457712.1	325934	327890	D	encoded by transcript ACA1_288910A; tetratricopeptide repeat domain containing protein	join(325934..326093,326182..326873,326961..327890)	Acanthamoeba castellanii str. Neff	14926213
ACA1_288920	CDS	ACA1_288920	NW_004457712.1	328054	328992	D	encoded by transcript ACA1_288920A; ribosomal protein S8e, putative	join(328054..328057,328174..328574,328645..328992)	Acanthamoeba castellanii str. Neff	14926214
ACA1_288930	CDS	ACA1_288930	NW_004457712.1	329201	338216	D	encoded by transcript ACA1_288930A; uncharacterized protein	join(329201..329299,329386..329527,329614..329729,329841..329930,330025..330265,330357..330565,330654..330835,331035..331158,331238..331460,331567..331853,332132..332208,332258..332632,332759..332866,332959..333103,333229..333385,333469..333680,333774..333944,334028..334207,334285..334918,335017..335359,335501..335681,335796..336027,336106..336345,336421..336572,336700..336794,336920..338216)	Acanthamoeba castellanii str. Neff	14926215
ACA1_289040	CDS	ACA1_289040	NW_004457712.1	338368	342286	R	encoded by transcript ACA1_289040A; polymerase (DNA directed), delta 1, catalytic subunit	complement(join(338368..339393,339472..339732,339818..339966,340037..340228,340305..340421,340497..340626,340720..340908,340984..341142,341220..341395,341461..341534,341607..341811,341884..342046,342116..342286))	Acanthamoeba castellanii str. Neff	14926216
ACA1_289050	CDS	ACA1_289050	NW_004457712.1	343273	345265	D	encoded by transcript ACA1_289050A; glycogen synthase kinase 3 alpha, putative	join(343273..343471,343647..343828,343899..344093,344341..344506,344579..344772,344839..345031,345114..345265)	Acanthamoeba castellanii str. Neff	14926217
ACA1_289060	CDS	ACA1_289060	NW_004457712.1	345670	348094	D	encoded by transcript ACA1_289060A; uncharacterized protein	join(345670..345688,345763..345915,345997..346121,346201..346292,346368..346414,346486..346570,346660..346858,346884..346997,347088..347147,347249..347471,347560..347721,347817..348094)	Acanthamoeba castellanii str. Neff	14926218
ACA1_289070	CDS	ACA1_289070	NW_004457712.1	348226	352385	R	encoded by transcript ACA1_289070A; RasGEF domain containing protein	complement(join(348226..348357,348447..348559,348661..348730,348903..349019,349123..349251,349343..349501,349557..349880,349968..350035,350099..350326,350398..350520,350611..350729,350829..350961,351036..351071,351370..351447,351540..351619,351709..351784,351863..352009,352086..352235,352319..352385))	Acanthamoeba castellanii str. Neff	14926219
ACA1_289080	CDS	ACA1_289080	NW_004457712.1	352566	353387	R	encoded by transcript ACA1_289080A; uncharacterized protein	complement(join(352566..352768,352877..353387))	Acanthamoeba castellanii str. Neff	14926220
ACA1_289090	CDS	ACA1_289090	NW_004457712.1	354284	357562	D	encoded by transcript ACA1_289090A; ankyrin repeat-containing protein	join(354284..354713,354911..355131,355186..355554,355631..356082,356097..356371,356495..356637,356768..356896,356966..357063,357133..357562)	Acanthamoeba castellanii str. Neff	14926221
ACA1_289100	CDS	ACA1_289100	NW_004457712.1	357644	358957	D	encoded by transcript ACA1_289100A; protein of function, putative	join(357644..358054,358201..358318,358409..358434,358514..358633,358844..358957)	Acanthamoeba castellanii str. Neff	14926222
ACA1_289110	CDS	ACA1_289110	NW_004457712.1	359105	360561	R	encoded by transcript ACA1_289110A; HemolysinIII related subfamily protein	complement(join(359105..359239,359328..359518,359617..359744,359857..360103,360429..360561))	Acanthamoeba castellanii str. Neff	14926223
ACA1_289120	CDS	ACA1_289120	NW_004457712.1	360980	361944	R	encoded by transcript ACA1_289120A; Ham1 family	complement(join(360980..361045,361142..361334,361493..361944))	Acanthamoeba castellanii str. Neff	14926224
ACA1_289130	CDS	ACA1_289130	NW_004457712.1	362521	364755	R	encoded by transcript ACA1_289130A; Fbox domain containing protein	complement(join(362521..363811,363860..364755))	Acanthamoeba castellanii str. Neff	14926225
ACA1_289140	CDS	ACA1_289140	NW_004457712.1	365608	369202	R	encoded by transcript ACA1_289140A; protein kinase domain containing protein	complement(join(365608..365842,365918..366024,366079..366186,366278..366396,366488..366659,366730..367161,367254..367517,367545..367640,367711..367837,367915..367966,368050..368162,368258..368496,368599..368733,368987..369202))	Acanthamoeba castellanii str. Neff	14926226
ACA1_289150	CDS	ACA1_289150	NW_004457712.1	369534	371571	R	encoded by transcript ACA1_289150A; uncharacterized protein	complement(join(369534..369710,369811..370022,370096..370204,370273..370428,370536..370655,370720..370889,370978..371121,371181..371571))	Acanthamoeba castellanii str. Neff	14926227
ACA1_289160	CDS	ACA1_289160	NW_004457712.1	372379	373175	D	encoded by transcript ACA1_289160A; MORN repeatcontaining protein	join(372379..372438,372498..373175)	Acanthamoeba castellanii str. Neff	14926228
ACA1_289170	CDS	ACA1_289170	NW_004457712.1	373249	373939	D	encoded by transcript ACA1_289170A; uncharacterized protein	join(373249..373505,373574..373697,373760..373939)	Acanthamoeba castellanii str. Neff	14926229
ACA1_289180	CDS	ACA1_289180	NW_004457712.1	375204	376191	D	encoded by transcript ACA1_289180A; Ras GTPase activation domain containing protein	join(375204..375319,375385..375530,375657..375688,375902..376054,376114..376191)	Acanthamoeba castellanii str. Neff	14926230
ACA1_289190	CDS	ACA1_289190	NW_004457712.1	376673	379968	D	encoded by transcript ACA1_289190A; uncharacterized protein	join(376673..376788,376853..377319,377330..377349,377367..379015,379081..379177,379240..379968)	Acanthamoeba castellanii str. Neff	14926231
ACA1_289200	CDS	ACA1_289200	NW_004457712.1	380079	381512	R	encoded by transcript ACA1_289200A; ATPase, AAA domain containing protein	complement(380079..381512)	Acanthamoeba castellanii str. Neff	14926232
ACA1_289210	CDS	ACA1_289210	NW_004457712.1	381847	383762	R	encoded by transcript ACA1_289210A; uncharacterized protein	complement(join(381847..381959,382220..382343,382424..382502,382597..382674,382816..382932,383002..383159,383254..383367,383438..383589,383699..383762))	Acanthamoeba castellanii str. Neff	14926233
ACA1_289220	CDS	ACA1_289220	NW_004457712.1	384394	388162	D	encoded by transcript ACA1_289220A; GTPaseactivator protein for Ras-like GTPase	join(384394..384408,384545..384643,384729..385031,385094..385184,385254..385489,385557..385674,385743..385882,385953..386024,386089..386155,386287..386534,386593..386685,386751..387146,387233..387373,387436..387561,387656..387733,387812..387922,387983..388162)	Acanthamoeba castellanii str. Neff	14926234
ACA1_289230	CDS	ACA1_289230	NW_004457712.1	389525	392612	D	encoded by transcript ACA1_289230A; GTPase-activator protein for Ras family GTPase	join(389525..389545,389644..389841,389920..390037,390114..390265,390288..390616,390677..390896,390975..391067,391143..391386,391459..391610,391683..391823,391891..392035,392108..392190,392255..392365,392433..392612)	Acanthamoeba castellanii str. Neff	14926235
ACA1_289240	CDS	ACA1_289240	NW_004457712.1	393342	394427	D	encoded by transcript ACA1_289240A; uncharacterized protein	join(393342..393460,393598..393706,393799..393891,393981..394074,394144..394427)	Acanthamoeba castellanii str. Neff	14926236
ACA1_289250	CDS	ACA1_289250	NW_004457712.1	394702	395878	D	encoded by transcript ACA1_289250A; uncharacterized protein	join(394702..395066,395134..395359,395449..395541,395615..395878)	Acanthamoeba castellanii str. Neff	14926237
ACA1_289260	CDS	ACA1_289260	NW_004457712.1	396223	397102	D	encoded by transcript ACA1_289260A; Ras gtpase-activating family protein	join(396223..396300,396376..396528,396585..396662,396736..396846,396920..397102)	Acanthamoeba castellanii str. Neff	14926238
ACA1_289280	CDS	ACA1_289280	NW_004457712.1	402635	406720	R	encoded by transcript ACA1_289280A; RasGEF domain containing protein	complement(join(402635..404456,404527..404997,405089..405180,405252..405344,405439..405528,405610..405693,405771..406200,406268..406433,406525..406596,406617..406662,406703..406720))	Acanthamoeba castellanii str. Neff	14926240
ACA1_289290	CDS	ACA1_289290	NW_004457712.1	408085	409320	R	encoded by transcript ACA1_289290A; integral membrane protein duf6 domain containing protein	complement(join(408085..408113,408175..408302,408364..408469,408537..408613,408696..408769,408837..408977,409063..409145,409221..409320))	Acanthamoeba castellanii str. Neff	14926241
ACA1_289300	CDS	ACA1_289300	NW_004457712.1	410186	413619	D	encoded by transcript ACA1_289300A; RhoGEF domain containing protein	join(410186..410251,410317..410388,410453..410542,410679..410793,410850..410941,411019..411219,411299..412051,412112..412201,412264..412350,412422..412514,412607..412702,412763..412861,412929..412997,413103..413298,413369..413503,413573..413619)	Acanthamoeba castellanii str. Neff	14926242
ACA1_289310	CDS	ACA1_289310	NW_004457712.1	413894	414499	D	encoded by transcript ACA1_289310A; methionineR-sulfoxide reductase	join(413894..413956,414023..414132,414196..414335,414393..414499)	Acanthamoeba castellanii str. Neff	14926243
ACA1_289320	CDS	ACA1_289320	NW_004457712.1	414717	415756	R	encoded by transcript ACA1_289320A; Myblike DNA-binding domain containing protein	complement(join(414717..414850,414945..415041,415103..415181,415260..415756))	Acanthamoeba castellanii str. Neff	14926244
ACA1_289330	CDS	ACA1_289330	NW_004457712.1	416260	417658	D	encoded by transcript ACA1_289330A; Ubox domain containing protein	join(416260..416337,416408..416565,416645..416687,416817..417005,417047..417144,417219..417485,417625..417658)	Acanthamoeba castellanii str. Neff	14926245
ACA1_289340	CDS	ACA1_289340	NW_004457712.1	417666	418753	D	encoded by transcript ACA1_289340A; Ubox domain containing protein	join(417666..417740,417808..417965,418027..418061,418099..418236,418305..418410,418468..418753)	Acanthamoeba castellanii str. Neff	14926246
ACA1_289350	CDS	ACA1_289350	NW_004457712.1	418828	420653	R	encoded by transcript ACA1_289350A; Lysyl oxidase protein	complement(join(418828..419063,419133..419221,419300..419414,419490..420182,420337..420507,420584..420653))	Acanthamoeba castellanii str. Neff	14926247
ACA1_289360	CDS	ACA1_289360	NW_004457712.1	421509	422466	D	encoded by transcript ACA1_289360A; DnaJ domain containing protein	join(421509..421647,421733..421797,421885..421950,422032..422160,422254..422466)	Acanthamoeba castellanii str. Neff	14926248
ACA1_289370	CDS	ACA1_289370	NW_004457712.1	422910	423918	R	encoded by transcript ACA1_289370A; uncharacterized protein	complement(join(422910..423163,423233..423311,423393..423499,423579..423804,423874..423918))	Acanthamoeba castellanii str. Neff	14926249
ACA1_289380	CDS	ACA1_289380	NW_004457712.1	424211	427003	D	encoded by transcript ACA1_289380A; uncharacterized protein	join(424211..424339,424410..424528,424597..424678,424742..424802,424870..424951,425026..425168,425430..425638,425719..425900,425979..426102,426184..426406,426621..426637,426733..426870,426941..427003)	Acanthamoeba castellanii str. Neff	14926250
ACA1_289590	CDS	ACA1_289590	NW_004457712.1	427044	428357	D	encoded by transcript ACA1_289590A; uncharacterized protein	join(427044..427101,427173..427266,427330..427423,427486..427595,427663..427717,427778..427931,428014..428070,428140..428162,428271..428357)	Acanthamoeba castellanii str. Neff	14926251
ACA1_289600	CDS	ACA1_289600	NW_004457712.1	428405	429349	D	encoded by transcript ACA1_289600A; uncharacterized protein	join(428405..428551,428612..428707,428767..428863,428967..429349)	Acanthamoeba castellanii str. Neff	14926252
ACA1_289610	CDS	ACA1_289610	NW_004457712.1	429517	431282	D	encoded by transcript ACA1_289610A; Protein P80, putative	join(429517..429808,429921..430012,430085..430180,430246..430296,430364..430453,430529..430585,430674..431001,431071..431282)	Acanthamoeba castellanii str. Neff	14926253
ACA1_289620	CDS	ACA1_289620	NW_004457712.1	431443	431805	R	encoded by transcript ACA1_289620A; uncharacterized protein	complement(431443..431805)	Acanthamoeba castellanii str. Neff	14926254
ACA1_289630	CDS	ACA1_289630	NW_004457712.1	432953	433570	R	encoded by transcript ACA1_289630A; uncharacterized protein	complement(432953..433570)	Acanthamoeba castellanii str. Neff	14926255
ACA1_289640	CDS	ACA1_289640	NW_004457712.1	434357	436805	D	encoded by transcript ACA1_289640A; uncharacterized protein	join(434357..434394,434443..434540,434679..434798,434862..435183,435223..435446,435525..435595,435672..435768,435838..435995,436099..436224,436294..436366,436450..436614,436690..436805)	Acanthamoeba castellanii str. Neff	14926256
ACA1_289650	CDS	ACA1_289650	NW_004457712.1	436926	439200	D	encoded by transcript ACA1_289650A; uncharacterized protein	join(436926..436995,437068..437242,437311..437411,437488..437658,437881..438797,438880..439200)	Acanthamoeba castellanii str. Neff	14926257
ACA1_289660	CDS	ACA1_289660	NW_004457712.1	439282	440015	D	encoded by transcript ACA1_289660A; churchill domain containing 1, putative	join(439282..439305,439385..439399,439456..439502,439571..439742,439833..439883,439980..440015)	Acanthamoeba castellanii str. Neff	14926258
ACA1_289670	CDS	ACA1_289670	NW_004457712.1	440170	441482	D	encoded by transcript ACA1_289670A; uncharacterized protein	join(440170..440653,440719..441222,441289..441482)	Acanthamoeba castellanii str. Neff	14926259
ACA1_289680	CDS	ACA1_289680	NW_004457712.1	442044	443312	R	encoded by transcript ACA1_289680A; uncharacterized protein	complement(join(442044..442105,442182..442284,442369..442512,442589..442628,442709..442856,442931..443312))	Acanthamoeba castellanii str. Neff	14926260
ACA1_289690	CDS	ACA1_289690	NW_004457712.1	443379	444774	R	encoded by transcript ACA1_289690A; uncharacterized protein	complement(join(443379..443417,443589..443645,443724..443834,443902..443984,444053..444124,444205..444314,444401..444489,444569..444690,444756..444774))	Acanthamoeba castellanii str. Neff	14926261
ACA1_289700	CDS	ACA1_289700	NW_004457712.1	444902	445934	D	encoded by transcript ACA1_289700A; uncharacterized protein	join(444902..445111,445185..445221,445308..445417,445649..445755,445841..445934)	Acanthamoeba castellanii str. Neff	14926262
ACA1_289710	CDS	ACA1_289710	NW_004457712.1	445995	446849	R	encoded by transcript ACA1_289710A; uncharacterized protein	complement(join(445995..446308,446374..446499,446570..446849))	Acanthamoeba castellanii str. Neff	14926263
ACA1_289720	CDS	ACA1_289720	NW_004457712.1	446968	447726	D	encoded by transcript ACA1_289720A; U1 zinc finger protein	join(446968..447151,447214..447626,447661..447726)	Acanthamoeba castellanii str. Neff	14926264
ACA1_289730	CDS	ACA1_289730	NW_004457712.1	448319	452840	D	encoded by transcript ACA1_289730A; tetratricopeptide repeat domain containing protein	join(448319..448985,449066..449172,449289..449442,449517..449621,449688..449803,449870..450133,450204..450244,450315..450398,450471..450591,450671..450759,450851..450952,451054..451179,451250..451460,451533..451692,451801..451926,451998..452137,452221..452360,452426..452840)	Acanthamoeba castellanii str. Neff	14926265
ACA1_289740	CDS	ACA1_289740	NW_004457712.1	453123	454675	D	encoded by transcript ACA1_289740A; RhoGAP domain containing protein	join(453123..453435,453536..453772,453866..453935,454020..454108,454203..454553,454578..454675)	Acanthamoeba castellanii str. Neff	14926266
ACA1_289750	CDS	ACA1_289750	NW_004457712.1	455007	457469	D	encoded by transcript ACA1_289750A; antioxidant, AhpC/TSA superfamily protein	join(455007..455511,455596..455835,455904..456178,456237..456537,456621..456836,456937..457093,457169..457233,457312..457469)	Acanthamoeba castellanii str. Neff	14926267
ACA1_289760	CDS	ACA1_289760	NW_004457712.1	457804	459926	D	encoded by transcript ACA1_289760A; FFD and TFG box motifscontaining protein	join(457804..457930,458017..458192,458266..458366,458428..459208,459291..459520,459610..459805,459888..459926)	Acanthamoeba castellanii str. Neff	14926268
ACA1_289770	CDS	ACA1_289770	NW_004457712.1	460256	462751	R	encoded by transcript ACA1_289770A; type I phosphodiesterase/nucleotide pyrophosphatase family protein	complement(join(460256..460384,460501..460568,460637..460774,460879..460997,461095..461183,461283..461384,461480..461570,461673..461748,461846..461952,462098..462176,462272..462366,462510..462751))	Acanthamoeba castellanii str. Neff	14926269
ACA1_289780	CDS	ACA1_289780	NW_004457712.1	462859	464495	R	encoded by transcript ACA1_289780A; uncharacterized protein	complement(join(462859..462980,463058..463165,463229..463289,463385..463597,463675..463827,463896..464247,464335..464495))	Acanthamoeba castellanii str. Neff	14926270
ACA1_289790	CDS	ACA1_289790	NW_004457712.1	464672	466008	R	encoded by transcript ACA1_289790A; uncharacterized protein	complement(join(464672..464848,464968..466008))	Acanthamoeba castellanii str. Neff	14926271
ACA1_289800	CDS	ACA1_289800	NW_004457712.1	466097	468224	R	encoded by transcript ACA1_289800A; DnaJ domain containing protein	complement(join(466097..466336,466461..466602,466663..466753,466827..466935,467018..467140,467208..467274,467348..467602,467678..467775,467856..468224))	Acanthamoeba castellanii str. Neff	14926272
ACA1_289810	CDS	ACA1_289810	NW_004457712.1	468375	471406	D	encoded by transcript ACA1_289810A; CDC45 like protein	join(468375..468503,468563..468661,468737..468874,468908..468943,468968..469338,469416..469733,469817..469919,470024..470185,470277..470332,470427..470569,470661..470725,470809..470931,471037..471155,471250..471406)	Acanthamoeba castellanii str. Neff	14926273
ACA1_289820	CDS	ACA1_289820	NW_004457712.1	471546	473975	R	encoded by transcript ACA1_289820A; DNA polymerase epsilon subunit B protein	complement(join(471546..471673,471764..471937,472049..472110,472210..472275,472360..472469,472623..472727,472826..472941,473027..473131,473222..473348,473450..473852,473923..473975))	Acanthamoeba castellanii str. Neff	14926274
ACA1_289830	CDS	ACA1_289830	NW_004457712.1	474104	476186	D	encoded by transcript ACA1_289830A; WD domain, G-beta repeat-containing protein	join(474104..474439,474503..474577,474818..474853,474922..474997,475068..475153,475228..475324,475425..475549,475745..475875,475968..476032,476095..476186)	Acanthamoeba castellanii str. Neff	14926275
ACA1_289840	CDS	ACA1_289840	NW_004457712.1	476293	477178	D	encoded by transcript ACA1_289840A; uncharacterized protein	join(476293..476578,476647..476746,476806..476924,477012..477178)	Acanthamoeba castellanii str. Neff	14926276
ACA1_289850	CDS	ACA1_289850	NW_004457712.1	477682	478530	D	encoded by transcript ACA1_289850A; uncharacterized protein	join(477682..477854,477920..478026,478097..478204,478265..478356,478486..478530)	Acanthamoeba castellanii str. Neff	14926277
ACA1_289860	CDS	ACA1_289860	NW_004457712.1	478699	479633	D	encoded by transcript ACA1_289860A; Raslike protein 1, putative	join(478699..478746,478841..478914,479064..479137,479257..479633)	Acanthamoeba castellanii str. Neff	14926278
ACA1_289870	CDS	ACA1_289870	NW_004457712.1	480431	486820	D	encoded by transcript ACA1_289870A; DEAD/DEAH box helicase	join(480431..480686,480796..480926,481056..481208,481298..481353,481457..481625,481740..481833,481925..482078,482157..482254,482334..482467,482579..482665,482757..483000,483130..483259,483337..483419,483532..483786,483903..483985,484164..484343,484439..484931,485012..485122,485202..485354,485514..485648,485729..485854,485948..486161,486277..486820)	Acanthamoeba castellanii str. Neff	14926279
ACA1_289880	CDS	ACA1_289880	NW_004457712.1	486919	490667	R	encoded by transcript ACA1_289880A; uncharacterized protein	complement(join(486919..487027,487070..487196,487289..487693,487793..487892,488006..488269,488390..488473,488569..488661,488764..489002,489090..489212,489341..489540,489766..490524,490624..490667))	Acanthamoeba castellanii str. Neff	14926280
ACA1_289890	CDS	ACA1_289890	NW_004457712.1	490795	491538	D	encoded by transcript ACA1_289890A; cupin superfamily protein	join(490795..490860,490988..491120,491216..491342,491430..491538)	Acanthamoeba castellanii str. Neff	14926281
ACA1_289900	CDS	ACA1_289900	NW_004457712.1	491901	492901	D	encoded by transcript ACA1_289900A; RAB11B protein, putative	join(491901..491937,492056..492217,492332..492640,492768..492901)	Acanthamoeba castellanii str. Neff	14926282
ACA1_289910	CDS	ACA1_289910	NW_004457712.1	493512	494109	D	encoded by transcript ACA1_289910A; membrance occupation and recognition nexus protein 1, putative	join(493512..493520,493594..494109)	Acanthamoeba castellanii str. Neff	14926283
ACA1_289920	CDS	ACA1_289920	NW_004457712.1	494351	496161	D	encoded by transcript ACA1_289920A; aspartate carbamoyltransferase	join(494351..494401,494473..494545,494607..494665,494735..494832,494912..494996,495077..495203,495283..495400,495470..495585,495679..495842,495914..495981,496071..496161)	Acanthamoeba castellanii str. Neff	14926284
ACA1_289930	CDS	ACA1_289930	NW_004457712.1	496826	497458	D	encoded by transcript ACA1_289930A; uncharacterized protein	496826..497458	Acanthamoeba castellanii str. Neff	14926285
ACA1_289950	CDS	ACA1_289950	NW_004457712.1	509536	513793	R	encoded by transcript ACA1_289950A; intersectin 2, putative	complement(join(509536..511155,511274..511423,511538..511661,511759..512012,512107..512269,512391..513793))	Acanthamoeba castellanii str. Neff	14926287
ACA1_289960	CDS	ACA1_289960	NW_004457712.1	513948	514243	R	encoded by transcript ACA1_289960A; uncharacterized protein	complement(join(513948..514003,514069..514243))	Acanthamoeba castellanii str. Neff	14926288
ACA1_289970	CDS	ACA1_289970	NW_004457712.1	514521	517387	D	encoded by transcript ACA1_289970A; FHA domain containing protein	join(514521..514563,514796..515125,515214..515400,515525..515681,515768..515881,516000..516848,516918..517050,517131..517387)	Acanthamoeba castellanii str. Neff	14926289
ACA1_289980	CDS	ACA1_289980	NW_004457712.1	517434	521578	R	encoded by transcript ACA1_289980A; FCP1like phosphatase, phosphatase subfamily protein	complement(join(517434..517508,517597..518091,518202..518376,518509..518573,518664..518751,518858..519765,519863..519909,520013..520132,520234..520303,520422..520509,520601..520767,520875..520976,521061..521208,521334..521578))	Acanthamoeba castellanii str. Neff	14926290
ACA1_289990	CDS	ACA1_289990	NW_004457712.1	521945	523657	D	encoded by transcript ACA1_289990A; uncharacterized protein	join(521945..522071,522210..522410,522503..522519,522708..522786,522859..523013,523122..523426,523552..523657)	Acanthamoeba castellanii str. Neff	14926291
ACA1_290100	CDS	ACA1_290100	NW_004457712.1	523929	525414	D	encoded by transcript ACA1_290100A; Krr1 family protein	join(523929..523969,524076..524287,524399..524496,524577..524672,524749..525414)	Acanthamoeba castellanii str. Neff	14926292
ACA1_290110	CDS	ACA1_290110	NW_004457712.1	525530	533382	R	encoded by transcript ACA1_290110A; eukaryotic translation initiation factor 2alpha kinase 1, putative	complement(join(525530..525748,525820..525989,526082..526207,526302..526578,526647..526743,526845..527014,527089..527156,527247..527387,527494..527697,527790..527919,528014..528173,528262..528416,528516..528635,528706..528837,528943..529101,529194..529457,529538..529576,529667..529774,529832..530089,530119..530249,530321..530431,530513..530669,530767..530883,530960..531119,531179..531310,531375..531665,531720..531829,531914..532062,532139..532259,532336..532450,532518..532615,532722..532841,532914..533019,533110..533228,533317..533382))	Acanthamoeba castellanii str. Neff	14926293
ACA1_290120	CDS	ACA1_290120	NW_004457712.1	533691	537253	D	encoded by transcript ACA1_290120A; uncharacterized protein	join(533691..534070,534142..534223,534312..534548,534617..534744,534816..534969,535064..535163,535240..535318,535385..535797,535875..535991,536071..536171,536253..536400,536481..536627,536723..536853,536960..537253)	Acanthamoeba castellanii str. Neff	14926294
ACA1_290130	CDS	ACA1_290130	NW_004457712.1	537431	539451	D	encoded by transcript ACA1_290130A; glutathione Stransferase domain containing protein	join(537431..537495,537762..537830,537963..538068,538150..538251,538361..538513,538612..538735,538809..538901,538986..539039,539124..539215,539320..539451)	Acanthamoeba castellanii str. Neff	14926295
ACA1_290140	CDS	ACA1_290140	NW_004457712.1	539930	542906	R	encoded by transcript ACA1_290140A; GTPase activating Rap/RanGAP domainlike 3, putative	complement(join(539930..540051,540133..540245,540329..540383,540448..540651,540735..540833,540912..541029,541130..541166,541252..541328,541419..541591,541658..541923,541986..542213,542288..542430,542515..542586,542677..542754,542844..542906))	Acanthamoeba castellanii str. Neff	14926296
ACA1_290150	CDS	ACA1_290150	NW_004457712.1	543208	543578	R	encoded by transcript ACA1_290150A; uncharacterized protein	complement(join(543208..543311,543449..543578))	Acanthamoeba castellanii str. Neff	14926297
ACA1_290160	CDS	ACA1_290160	NW_004457712.1	543912	545233	D	encoded by transcript ACA1_290160A; Rasrelated GTP binding B long isoform isoform 1, putative	join(543912..544002,544103..544275,544355..544471,544552..544862,544927..545042,545139..545233)	Acanthamoeba castellanii str. Neff	14926298
ACA1_290170	CDS	ACA1_290170	NW_004457712.1	545610	546826	D	encoded by transcript ACA1_290170A; uncharacterized protein	join(545610..546359,546474..546588,546663..546826)	Acanthamoeba castellanii str. Neff	14926299
ACA1_290180	CDS	ACA1_290180	NW_004457712.1	547053	547623	D	encoded by transcript ACA1_290180A; uncharacterized protein	join(547053..547112,547177..547348,547388..547623)	Acanthamoeba castellanii str. Neff	14926300
ACA1_290190	CDS	ACA1_290190	NW_004457712.1	547693	548303	D	encoded by transcript ACA1_290190A; SCF ubiquitin ligase complex protein SKP1a, putative	join(547693..548007,548068..548104,548167..548303)	Acanthamoeba castellanii str. Neff	14926301
ACA1_290200	CDS	ACA1_290200	NW_004457712.1	548676	549800	D	encoded by transcript ACA1_290200A; uncharacterized protein	join(548676..548871,548935..549082,549197..549362,549441..549521,549600..549800)	Acanthamoeba castellanii str. Neff	14926302
ACA1_290210	CDS	ACA1_290210	NW_004457712.1	549824	553448	D	encoded by transcript ACA1_290210A; uncharacterized protein	join(549824..550071,550145..550273,550358..550511,550583..550807,550891..551101,551180..551365,551443..551662,551731..552046,552124..552273,552358..552498,552582..552677,552771..553166,553254..553448)	Acanthamoeba castellanii str. Neff	14926303
ACA1_290220	CDS	ACA1_290220	NW_004457712.1	553499	559566	D	encoded by transcript ACA1_290220A; ubiquitin carboxyl-terminal hydrolase	join(553499..553992,554087..554117,554130..554330,554403..554512,554604..554735,554840..554898,554978..555136,555227..555444,555503..555619,555730..556051,556130..556225,556305..556541,556629..557115,557216..557295,557373..557518,557614..557780,557891..558008,558085..558168,558258..558368,558483..558620,558710..558947,558999..559148,559219..559310,559441..559566)	Acanthamoeba castellanii str. Neff	14926304
ACA1_290230	CDS	ACA1_290230	NW_004457712.1	560060	566837	D	encoded by transcript ACA1_290230A; phosphate ABC transporter, phosphatebinding protein PstS, putative	join(560060..560120,560350..560647,560828..561107,561195..561351,561429..561567,561647..561909,561979..562091,562173..562250,562440..562872,562944..563091,563202..563823,563964..564249,564433..564648,564725..564856,564940..565321,565421..565563,565649..566207,566279..566837)	Acanthamoeba castellanii str. Neff	14926305
ACA1_290240	CDS	ACA1_290240	NW_004457712.1	567094	568356	R	encoded by transcript ACA1_290240A; 4hydroxyphenylpyruvate dioxygenase	complement(567094..568356)	Acanthamoeba castellanii str. Neff	14926306
ACA1_290250	CDS	ACA1_290250	NW_004457712.1	568823	570430	D	encoded by transcript ACA1_290250A; uncharacterized protein	join(568823..569005,569132..569198,569269..569369,569446..569554,569649..569774,569845..569986,570068..570296,570383..570430)	Acanthamoeba castellanii str. Neff	14926307
ACA1_290260	CDS	ACA1_290260	NW_004457712.1	570575	571204	R	encoded by transcript ACA1_290260A; uncharacterized protein	complement(570575..571204)	Acanthamoeba castellanii str. Neff	14926308
ACA1_290270	CDS	ACA1_290270	NW_004457712.1	571832	574193	R	encoded by transcript ACA1_290270A; Tcomplex protein 1, delta subunit	complement(join(571832..571960,572096..572330,572396..572526,572596..572703,572769..573005,573076..573231,573298..573402,573485..573736,573801..573892,574082..574193))	Acanthamoeba castellanii str. Neff	14926309
ACA1_290280	CDS	ACA1_290280	NW_004457712.1	574351	578921	R	encoded by transcript ACA1_290280A; Exportin 1like protein	complement(join(574351..574560,574631..574789,574869..575004,575097..575218,575299..575454,575531..575637,575704..575839,575930..576055,576111..576231,576320..576443,576528..576590,576664..576717,576920..577070,577134..577191,577259..577356,577440..577517,577592..577785,577862..577988,578065..578175,578240..578343,578422..578519,578604..578715,578828..578921))	Acanthamoeba castellanii str. Neff	14926310
ACA1_290290	CDS	ACA1_290290	NW_004457712.1	579215	580201	R	encoded by transcript ACA1_290290A; PB1 domain containing protein	complement(579215..580201)	Acanthamoeba castellanii str. Neff	14926311
ACA1_290300	CDS	ACA1_290300	NW_004457712.1	580604	584913	R	encoded by transcript ACA1_290300A; serine/threonine protein kinase, putative	complement(join(580604..581220,581313..581885,581966..582108,582224..582605,582729..582857,582966..583181,583276..583585,583687..584311,584377..584524,584595..584913))	Acanthamoeba castellanii str. Neff	14926312
ACA1_290310	CDS	ACA1_290310	NW_004457712.1	584922	586493	R	encoded by transcript ACA1_290310A; uncharacterized protein	complement(join(584922..585017,585087..585164,585244..585619,585705..585843,585920..586076,586147..586418,586475..586493))	Acanthamoeba castellanii str. Neff	14926313
ACA1_290420	CDS	ACA1_290420	NW_004457712.1	589304	590837	R	encoded by transcript ACA1_290420A; uncharacterized protein	complement(join(589304..589777,589845..590034,590123..590337,590403..590624,590688..590837))	Acanthamoeba castellanii str. Neff	14926314
ACA1_290430	CDS	ACA1_290430	NW_004457712.1	591101	591658	D	encoded by transcript ACA1_290430A; uncharacterized protein	join(591101..591478,591545..591658)	Acanthamoeba castellanii str. Neff	14926315
ACA1_290440	CDS	ACA1_290440	NW_004457712.1	591833	594337	R	encoded by transcript ACA1_290440A; uncharacterized protein	complement(join(591833..591961,592006..592119,592198..592297,592336..592407,592510..593118,593213..593300,593392..593446,593543..593728,593809..594111,594206..594337))	Acanthamoeba castellanii str. Neff	14926316
ACA1_290450	CDS	ACA1_290450	NW_004457712.1	594531	596580	D	encoded by transcript ACA1_290450A; rubisco lsmt substrate-binding protein	join(594531..594543,594703..594891,594981..595129,595201..595329,595413..595553,595691..595878,595969..596045,596137..596261,596365..596580)	Acanthamoeba castellanii str. Neff	14926317
ACA1_290460	CDS	ACA1_290460	NW_004457712.1	596816	598109	D	encoded by transcript ACA1_290460A; uncharacterized protein	join(596816..597083,597164..597365,597451..597652,597734..597783,597908..598109)	Acanthamoeba castellanii str. Neff	14926318
ACA1_290470	CDS	ACA1_290470	NW_004457712.1	598490	599304	R	encoded by transcript ACA1_290470A; u6 snrnaassociated sm-like protein lsm8, putative	complement(join(598490..598580,598665..598789,598861..598901,599277..599304))	Acanthamoeba castellanii str. Neff	14926319
ACA1_290480	CDS	ACA1_290480	NW_004457712.1	599527	600165	D	encoded by transcript ACA1_290480A; aminoacyltRNA hydrolase	join(599527..599741,599825..599868,599969..600165)	Acanthamoeba castellanii str. Neff	14926320
ACA1_290500	CDS	ACA1_290500	NW_004457712.1	603697	606377	R	encoded by transcript ACA1_290500A; SET domain containing protein	complement(join(603697..603775,603854..603927,604031..604122,604204..604291,604510..604704,604810..604913,604992..605075,605163..605245,605486..605711,605806..605922,605984..606152,606165..606224,606315..606377))	Acanthamoeba castellanii str. Neff	14926322
ACA1_290510	CDS	ACA1_290510	NW_004457712.1	606728	611801	R	encoded by transcript ACA1_290510A; ABC transporter, ATPbinding domain containing protein	complement(join(606728..606867,606946..607109,607203..607327,607397..607517,607595..607640,607725..607881,607978..608027,608107..608221,608291..608399,608471..608553,608664..608993,609092..609159,609233..609316,609395..609520,609608..609710,609790..609837,609920..610035,610142..610303,610388..610541,610818..610977,611084..611181,611374..611566,611764..611801))	Acanthamoeba castellanii str. Neff	14926323
ACA1_290520	CDS	ACA1_290520	NW_004457712.1	612110	616795	D	encoded by transcript ACA1_290520A; ABC transporter, ATPbinding domain containing protein	join(612110..612184,612327..612444,612543..612605,612692..612744,612858..612960,613050..613202,613283..613366,613472..613525,613626..613699,613795..614008,614125..614171,614261..614383,614472..614648,614735..614861,614930..615075,615150..615383,615483..615564,615661..615701,615805..615931,616002..616069,616147..616222,616299..616383,616458..616641,616727..616795)	Acanthamoeba castellanii str. Neff	14926324
ACA1_290530	CDS	ACA1_290530	NW_004457712.1	616908	617960	R	encoded by transcript ACA1_290530A; uncharacterized protein	complement(join(616908..617498,617570..617747,617839..617960))	Acanthamoeba castellanii str. Neff	14926325
ACA1_290540	CDS	ACA1_290540	NW_004457712.1	618425	619555	D	encoded by transcript ACA1_290540A; Der1like domain family, member 1, putative	join(618425..618654,618750..618828,618969..619126,619208..619337,619451..619555)	Acanthamoeba castellanii str. Neff	14926326
ACA1_290550	CDS	ACA1_290550	NW_004457712.1	619933	624479	D	encoded by transcript ACA1_290550A; calponin domain containing protein	join(619933..620196,620326..620427,620547..620666,620768..621021,621087..621240,621327..621418,621481..621574,621658..621735,621843..621931,622001..622076,622170..622295,622445..622583,622670..622756,622838..622926,622998..623186,623241..623354,623484..623582,623652..623732,623822..623917,624026..624325,624405..624479)	Acanthamoeba castellanii str. Neff	14926327
ACA1_290560	CDS	ACA1_290560	NW_004457712.1	624701	626690	D	encoded by transcript ACA1_290560A; carboxypeptidase A3, putative	join(624701..625030,625176..625280,625363..625432,625543..625759,625860..625975,626052..626164,626238..626298,626372..626524,626587..626690)	Acanthamoeba castellanii str. Neff	14926328
ACA1_290570	CDS	ACA1_290570	NW_004457712.1	626885	627265	D	encoded by transcript ACA1_290570A; uncharacterized protein	626885..627265	Acanthamoeba castellanii str. Neff	14926329
ACA1_290580	CDS	ACA1_290580	NW_004457712.1	627646	629295	D	encoded by transcript ACA1_290580A; BTB/POZ domain containing protein	join(627646..627666,627871..628059,628114..628305,628392..628635,628706..629295)	Acanthamoeba castellanii str. Neff	14926330
ACA1_290590	CDS	ACA1_290590	NW_004457712.1	629444	631507	R	encoded by transcript ACA1_290590A; glutamate-ammonia ligase	complement(join(629444..629904,630002..630206,630266..630460,630625..630693,630798..630933,631022..631126,631290..631507))	Acanthamoeba castellanii str. Neff	14926331
ACA1_290600	CDS	ACA1_290600	NW_004457712.1	632373	633320	D	encoded by transcript ACA1_290600A; uncharacterized protein	join(632373..633185,633288..633320)	Acanthamoeba castellanii str. Neff	14926332
ACA1_290610	CDS	ACA1_290610	NW_004457712.1	633284	638894	R	encoded by transcript ACA1_290610A; RasGEF domain containing protein	complement(join(633284..633409,633515..633671,633764..633861,633963..634079,634208..634285,634396..634497,634641..634727,634834..634976,635109..635251,635365..635529,635606..635792,635874..635928,636000..636093,636187..636251,636343..636455,636526..636591,636666..637509,637588..637704,637835..637880,637955..638037,638128..638185,638325..638428,638490..638573,638676..638894))	Acanthamoeba castellanii str. Neff	14926333
ACA1_290620	CDS	ACA1_290620	NW_004457712.1	639045	640592	D	encoded by transcript ACA1_290620A; short chain dehydrogenase, putative	join(639045..639136,639207..639321,639389..639512,639593..639706,639813..639946,640030..640075,640152..640270,640360..640480,640558..640592)	Acanthamoeba castellanii str. Neff	14926334
ACA1_290640	CDS	ACA1_290640	NW_004457712.1	642435	644551	R	encoded by transcript ACA1_290640A; uncharacterized protein	complement(join(642435..642636,642740..642896,642980..643066,643158..643412,643484..643622,643702..643789,643870..643948,644039..644216,644339..644551))	Acanthamoeba castellanii str. Neff	14926336
ACA1_290650	CDS	ACA1_290650	NW_004457712.1	644853	650539	D	encoded by transcript ACA1_290650A; DENN (AEX3) domain containing protein	join(644853..644951,645211..645346,645419..645483,645593..645760,645852..646014,646125..646292,646369..646494,646569..647035,647138..647611,647722..647891,647988..648082,648168..648309,648400..648546,648813..650108,650227..650539)	Acanthamoeba castellanii str. Neff	14926337
ACA1_290660	CDS	ACA1_290660	NW_004457712.1	650834	651353	R	encoded by transcript ACA1_290660A; RNA recognition motif domain containing protein	complement(join(650834..651180,651260..651353))	Acanthamoeba castellanii str. Neff	14926338
ACA1_290670	CDS	ACA1_290670	NW_004457712.1	652163	652637	D	encoded by transcript ACA1_290670A; Hypothetical protein	join(<652163..652235,652305..652376,652492..652637)	Acanthamoeba castellanii str. Neff	14926339
ACA1_290680	CDS	ACA1_290680	NW_004457712.1	652746	654259	R	encoded by transcript ACA1_290680A; NHL repeat-containing protein	complement(join(652746..653813,653956..654013,654048..654259))	Acanthamoeba castellanii str. Neff	14926340
ACA1_290690	CDS	ACA1_290690	NW_004457712.1	654695	657361	R	encoded by transcript ACA1_290690A; protein kinase domain containing protein	complement(join(654695..654925,655023..655187,655455..655554,655657..655791,655891..656071,656206..656337,656454..656592,656610..656717,656824..657112,657255..657361))	Acanthamoeba castellanii str. Neff	14926341
ACA1_290700	CDS	ACA1_290700	NW_004457712.1	657545	658468	R	encoded by transcript ACA1_290700A; uncharacterized protein	complement(657545..658468)	Acanthamoeba castellanii str. Neff	14926342
ACA1_290710	CDS	ACA1_290710	NW_004457712.1	659272	662069	D	encoded by transcript ACA1_290710A; RhoGAP domain containing protein	join(659272..660081,660230..660320,660427..660587,660679..660951,661071..661140,661312..661388,661484..661584,661690..661855,661953..662069)	Acanthamoeba castellanii str. Neff	14926343
ACA1_290720	CDS	ACA1_290720	NW_004457712.1	662225	662882	R	encoded by transcript ACA1_290720A; copper binding protein, plastocyanin/azurin superfamily protein	complement(join(662225..662793,662858..662882))	Acanthamoeba castellanii str. Neff	14926344
ACA1_290730	CDS	ACA1_290730	NW_004457712.1	663859	664332	D	encoded by transcript ACA1_290730A; uncharacterized protein	663859..664332	Acanthamoeba castellanii str. Neff	14926345
ACA1_290740	CDS	ACA1_290740	NW_004457712.1	664723	666529	D	encoded by transcript ACA1_290740A; uncharacterized protein	join(664723..664938,665012..665137,665221..665419,665498..665545,665625..665777,665870..665970,666079..666213,666359..666529)	Acanthamoeba castellanii str. Neff	14926346
ACA1_290750	CDS	ACA1_290750	NW_004457712.1	666614	668889	R	encoded by transcript ACA1_290750A; oxidoreductase NADbinding domain containing protein	complement(join(666614..666811,666842..667378,667612..667936,668054..668196,668283..668569,668628..668706,668806..668889))	Acanthamoeba castellanii str. Neff	14926347
ACA1_290770	CDS	ACA1_290770	NW_004457712.1	670227	671745	R	encoded by transcript ACA1_290770A; apolipoprotein AI binding protein	complement(join(670227..670308,670380..670455,670521..670562,670653..670719,670813..670860,670970..671099,671152..671250,671372..671523,671563..671745))	Acanthamoeba castellanii str. Neff	14926349
ACA1_290780	CDS	ACA1_290780	NW_004457712.1	672131	673768	R	encoded by transcript ACA1_290780A; proteinbinding protein	complement(join(672131..672218,672321..672396,672462..672503,672621..672687,672758..672835,673054..673128,673267..673311,673534..673620,673679..>673768))	Acanthamoeba castellanii str. Neff	14926350
ACA1_290790	CDS	ACA1_290790	NW_004457712.1	673986	677271	R	encoded by transcript ACA1_290790A; glycosyltransferase, MGT subfamily protein	complement(join(673986..674331,674413..674517,674593..674722,674827..675013,675093..675254,675330..675389,675463..675602,675657..675723,675818..676093,676174..676385,676495..676615,676689..676785,676878..677053,677185..677271))	Acanthamoeba castellanii str. Neff	14926351
ACA1_290800	CDS	ACA1_290800	NW_004457712.1	677397	679218	R	encoded by transcript ACA1_290800A; SAP domain containing protein	complement(join(677397..677728,677811..677935,678013..678137,678195..678226,678312..678396,678475..678572,678648..679218))	Acanthamoeba castellanii str. Neff	14926352
ACA1_290810	CDS	ACA1_290810	NW_004457712.1	679333	680335	D	encoded by transcript ACA1_290810A; uncharacterized protein	join(679333..679459,679610..679686,679796..679878,679956..680095,680187..680335)	Acanthamoeba castellanii str. Neff	14926353
ACA1_290820	CDS	ACA1_290820	NW_004457712.1	680352	682559	D	encoded by transcript ACA1_290820A; haloacid dehalogenaselike hydrolase domain containing protein	join(680352..680913,681012..681150,681237..681356,681497..681732,681791..682099,682158..682385,682468..682559)	Acanthamoeba castellanii str. Neff	14926354
ACA1_290830	CDS	ACA1_290830	NW_004457712.1	682624	684958	R	encoded by transcript ACA1_290830A; uncharacterized protein	complement(join(682624..682800,682879..682985,683123..683284,683378..683496,683622..683728,683832..683941,684038..684214,684329..684454,684553..684667,684779..684958))	Acanthamoeba castellanii str. Neff	14926355
ACA1_290850	CDS	ACA1_290850	NW_004457712.1	689157	690036	R	encoded by transcript ACA1_290850A; uncharacterized protein	complement(join(689157..689456,689569..690036))	Acanthamoeba castellanii str. Neff	14926357
ACA1_290860	CDS	ACA1_290860	NW_004457712.1	690716	691740	R	encoded by transcript ACA1_290860A; uncharacterized protein	complement(join(690716..691042,691117..691740))	Acanthamoeba castellanii str. Neff	14926358
ACA1_290870	CDS	ACA1_290870	NW_004457712.1	692699	693193	D	encoded by transcript ACA1_290870A; uncharacterized protein	join(692699..693160,693182..693193)	Acanthamoeba castellanii str. Neff	14926359
ACA1_290880	CDS	ACA1_290880	NW_004457712.1	693446	695426	R	encoded by transcript ACA1_290880A; chaperone protein DnaJ, putative	complement(join(693446..693548,693661..693911,693993..694232,694304..694486,694574..694741,694841..695010,695225..695426))	Acanthamoeba castellanii str. Neff	14926360
ACA1_290890	CDS	ACA1_290890	NW_004457712.1	695656	696895	R	encoded by transcript ACA1_290890A; MORN repeat-containing protein	complement(join(695656..696143,696229..696724,696815..696895))	Acanthamoeba castellanii str. Neff	14926361
ACA1_290900	CDS	ACA1_290900	NW_004457712.1	696994	698643	R	encoded by transcript ACA1_290900A; Fbox domain containing protein	complement(join(696994..697093,697205..697295,697374..697494,697590..697716,697796..698643))	Acanthamoeba castellanii str. Neff	14926362
ACA1_290910	CDS	ACA1_290910	NW_004457712.1	698998	700576	D	encoded by transcript ACA1_290910A; arsenite transporter, putative	join(698998..699135,699211..699306,699419..699451,699547..699689,699781..699931,699996..700136,700212..700314,700389..700576)	Acanthamoeba castellanii str. Neff	14926363
ACA1_290920	CDS	ACA1_290920	NW_004457712.1	700972	701882	D	encoded by transcript ACA1_290920A; uncharacterized protein	join(700972..701484,701571..701882)	Acanthamoeba castellanii str. Neff	14926364
ACA1_290930	CDS	ACA1_290930	NW_004457712.1	702579	703435	D	encoded by transcript ACA1_290930A; uncharacterized protein	join(702579..703055,703124..703435)	Acanthamoeba castellanii str. Neff	14926365
ACA1_290940	CDS	ACA1_290940	NW_004457712.1	704110	704901	D	encoded by transcript ACA1_290940A; uncharacterized protein	join(704110..704580,704650..704901)	Acanthamoeba castellanii str. Neff	14926366
ACA1_290950	CDS	ACA1_290950	NW_004457712.1	705272	707612	D	encoded by transcript ACA1_290950A; cytochrome p450 superfamily protein	join(705272..705453,705526..705632,705713..705805,705908..706021,706145..706285,706375..706572,706716..706810,706892..707069,707184..707303,707382..707419,707556..707612)	Acanthamoeba castellanii str. Neff	14926367
ACA1_290960	CDS	ACA1_290960	NW_004457712.1	707759	709371	R	encoded by transcript ACA1_290960A; uncharacterized protein	complement(join(707759..708396,708488..708588,708702..708996,709113..709206,709345..709371))	Acanthamoeba castellanii str. Neff	14926368
ACA1_290970	CDS	ACA1_290970	NW_004457712.1	709567	710598	R	encoded by transcript ACA1_290970A; dioxygenase subfamily protein	complement(join(709567..710215,710303..710419,710504..710598))	Acanthamoeba castellanii str. Neff	14926369
ACA1_290980	CDS	ACA1_290980	NW_004457712.1	710936	712545	R	encoded by transcript ACA1_290980A; uncharacterized protein	complement(join(710936..710960,710989..711114,711199..711326,711538..711707,711872..712013,712165..712283,712296..712358,712458..712545))	Acanthamoeba castellanii str. Neff	14926370
ACA1_290990	CDS	ACA1_290990	NW_004457712.1	713143	715176	R	encoded by transcript ACA1_290990A; hnRNPL/PTB/hephaestus splicing factor subfamily protein	complement(join(713143..713338,713448..714713,714911..715176))	Acanthamoeba castellanii str. Neff	14926371
ACA1_291000	CDS	ACA1_291000	NW_004457712.1	715688	719573	D	encoded by transcript ACA1_291000A; ribonuclease III, putative	join(715688..716382,716457..716583,716685..716821,716923..717103,717441..717692,717771..717960,718051..718172,718268..718378,718513..718665,718831..718972,719089..719251,719348..719460,719542..719573)	Acanthamoeba castellanii str. Neff	14926372
ACA1_291010	CDS	ACA1_291010	NW_004457712.1	720041	720491	R	encoded by transcript ACA1_291010A; TAF9 RNA polymerase II, TATA box binding protein (TBP)associated factor, putative	complement(join(720041..720050,720118..720491))	Acanthamoeba castellanii str. Neff	14926373
ACA1_291020	CDS	ACA1_291020	NW_004457712.1	720941	722191	D	encoded by transcript ACA1_291020A; exosome complex exonuclease rrp41, putative	join(720941..721111,721335..721378,721514..721629,721754..721804,721956..722191)	Acanthamoeba castellanii str. Neff	14926374
ACA1_291030	CDS	ACA1_291030	NW_004457712.1	722327	722749	R	encoded by transcript ACA1_291030A; uncharacterized protein	complement(join(722327..722556,722587..722749))	Acanthamoeba castellanii str. Neff	14926375
ACA1_291040	CDS	ACA1_291040	NW_004457712.1	724039	726400	D	encoded by transcript ACA1_291040A; WRKY DNA -binding domain containing protein	join(724039..724092,724140..724254,724341..724568,724657..724812,724916..725036,725160..725267,725375..725553,725649..726400)	Acanthamoeba castellanii str. Neff	14926376
ACA1_291050	CDS	ACA1_291050	NW_004457712.1	726474	730616	R	encoded by transcript ACA1_291050A; ankyrin repeat-containing protein	complement(join(726474..726614,726742..727428,727559..727674,727745..728161,728265..728387,728485..728601,728669..728762,728838..729002,729142..729510,729617..729831,729929..730004,730122..730186,730276..730365,730466..730616))	Acanthamoeba castellanii str. Neff	14926377
ACA1_291060	CDS	ACA1_291060	NW_004457712.1	730764	731813	R	encoded by transcript ACA1_291060A; uncharacterized protein	complement(join(730764..731189,731286..731483,731579..731666,731758..731813))	Acanthamoeba castellanii str. Neff	14926378
ACA1_291070	CDS	ACA1_291070	NW_004457712.1	731948	732462	D	encoded by transcript ACA1_291070A; uncharacterized protein	join(731948..732020,732094..732251,732337..732462)	Acanthamoeba castellanii str. Neff	14926379
ACA1_291080	CDS	ACA1_291080	NW_004457712.1	732538	733768	D	encoded by transcript ACA1_291080A; uncharacterized protein	join(732538..732647,732762..732878,732959..733015,733097..733168,733496..733593,733671..733768)	Acanthamoeba castellanii str. Neff	14926380
ACA1_291090	CDS	ACA1_291090	NW_004457712.1	733861	735828	D	encoded by transcript ACA1_291090A; DUF89 domain protein	join(733861..734033,734096..734154,734249..734333,734457..734605,734677..734799,734869..735092,735167..735244,735344..735636,735699..735828)	Acanthamoeba castellanii str. Neff	14926381
ACA1_291100	CDS	ACA1_291100	NW_004457712.1	736345	738254	D	encoded by transcript ACA1_291100A; uncharacterized protein	join(736345..736398,736520..736591,736658..736717,736829..736903,736994..737062,737162..737308,737381..737524,737649..737744,737823..738082,738170..738254)	Acanthamoeba castellanii str. Neff	14926382
ACA1_291110	CDS	ACA1_291110	NW_004457712.1	738456	740630	R	encoded by transcript ACA1_291110A; uncharacterized protein	complement(join(738456..739106,739216..740575,740611..740630))	Acanthamoeba castellanii str. Neff	14926383
ACA1_291120	CDS	ACA1_291120	NW_004457712.1	741568	746594	D	encoded by transcript ACA1_291120A; PUA domain containing protein	join(741568..741688,741795..742045,742184..742288,742386..742508,742646..742819,742992..743081,743163..743190,743278..743408,743507..743554,743700..743945,744060..744134,744284..744419,744607..744678,744784..745084,745179..745316,745420..745453,745511..745579,745747..745878,746008..746229,746328..746594)	Acanthamoeba castellanii str. Neff	14926384
ACA1_291330	CDS	ACA1_291330	NW_004457712.1	746769	748479	R	encoded by transcript ACA1_291330A; ribosomal RNA large subunit methyltransferase J, putative	complement(join(746769..746810,746884..746951,747043..747126,747206..747328,747563..747649,747739..747832,747921..747999,748129..748216,748274..748367,748453..748479))	Acanthamoeba castellanii str. Neff	14926385
ACA1_291340	CDS	ACA1_291340	NW_004457712.1	749041	749747	R	encoded by transcript ACA1_291340A; Sumo domain-containing protein	complement(join(749041..749168,749341..749374,749437..749586,749658..749747))	Acanthamoeba castellanii str. Neff	14926386
ACA1_291350	CDS	ACA1_291350	NW_004457712.1	750019	752079	D	encoded by transcript ACA1_291350A; GTPase of unknown function subfamily protein	join(750019..750251,750321..751392,751503..751726,751800..752079)	Acanthamoeba castellanii str. Neff	14926387
ACA1_291360	CDS	ACA1_291360	NW_004457712.1	752320	752624	R	encoded by transcript ACA1_291360A; ribosomal protein S11, putative	complement(join(752320..752342,752414..752624))	Acanthamoeba castellanii str. Neff	14926388
ACA1_291470	CDS	ACA1_291470	NW_004457712.1	753283	754290	R	encoded by transcript ACA1_291470A; 20S proteasome subunit beta 3, putative	complement(join(753283..753331,753440..753534,753616..753793,753892..753999,754069..754185,754259..754290))	Acanthamoeba castellanii str. Neff	14926389
ACA1_291480	CDS	ACA1_291480	NW_004457712.1	754716	756319	D	encoded by transcript ACA1_291480A; proteasome (prosome, macropain) 26S subunit, nonATPase, 6, putative	join(754716..754878,754974..755325,755438..755772,755864..756032,756145..756319)	Acanthamoeba castellanii str. Neff	14926390
ACA1_291490	CDS	ACA1_291490	NW_004457712.1	756503	757775	R	encoded by transcript ACA1_291490A; ribulosephosphate 3-epimerase	complement(join(756503..756700,756807..756872,756998..757113,757241..757341,757451..757516,757645..757775))	Acanthamoeba castellanii str. Neff	14926391
ACA1_291500	CDS	ACA1_291500	NW_004457712.1	758071	760886	R	encoded by transcript ACA1_291500A; Dual specificity protein kinase shkC, putative	complement(join(758071..758175,758353..758568,758683..758823,758931..759160,759291..759431,759523..759663,759784..759938,760025..760111,760258..760886))	Acanthamoeba castellanii str. Neff	14926392
ACA1_291510	CDS	ACA1_291510	NW_004457712.1	761259	766246	D	encoded by transcript ACA1_291510A; Ubiquitin carboxylterminal hydrolase 15, putative	join(761259..762100,762225..762837,762931..763097,763193..763325,763419..763580,763660..763760,763849..764089,764171..764425,764496..764601,764937..765108,765175..765263,765337..765531,765648..765863,766044..766246)	Acanthamoeba castellanii str. Neff	14926393
ACA1_291520	CDS	ACA1_291520	NW_004457712.1	767669	771336	D	encoded by transcript ACA1_291520A; RFX DNAbinding domain containing protein	join(767669..767775,768112..770097,770182..770400,770478..770812,770960..771336)	Acanthamoeba castellanii str. Neff	14926394
ACA1_291530	CDS	ACA1_291530	NW_004457712.1	771691	772095	D	encoded by transcript ACA1_291530A; uncharacterized protein	771691..772095	Acanthamoeba castellanii str. Neff	14926395
ACA1_291540	CDS	ACA1_291540	NW_004457712.1	772314	775762	R	encoded by transcript ACA1_291540A; nucleoporin interacting component protein	complement(join(772314..772657,772773..773200,773330..773435,773502..773673,773787..773933,774012..774149,774230..774506,774640..774803,774885..775238,775421..775762))	Acanthamoeba castellanii str. Neff	14926396
ACA1_291550	CDS	ACA1_291550	NW_004457712.1	775958	776803	D	encoded by transcript ACA1_291550A; prohibitin PHB1, putative	775958..776803	Acanthamoeba castellanii str. Neff	14926397
ACA1_291560	CDS	ACA1_291560	NW_004457712.1	777237	778037	D	encoded by transcript ACA1_291560A; HMG (high mobility group) box domain containing protein	join(777237..777413,777527..777805,777876..778037)	Acanthamoeba castellanii str. Neff	14926398
ACA1_291570	CDS	ACA1_291570	NW_004457712.1	778628	780029	D	encoded by transcript ACA1_291570A; Ras family protein	join(778628..778861,779338..779439,779564..779697,779861..780029)	Acanthamoeba castellanii str. Neff	14926399
ACA1_291580	CDS	ACA1_291580	NW_004457712.1	780138	781133	R	encoded by transcript ACA1_291580A; uncharacterized protein	complement(join(780138..780825,780892..781133))	Acanthamoeba castellanii str. Neff	14926400
ACA1_291590	CDS	ACA1_291590	NW_004457712.1	781856	783004	D	encoded by transcript ACA1_291590A; Kazaltype serine protease inhibitor domain containing protein	join(781856..782032,782135..782251,782263..782292,782388..782531,782615..783004)	Acanthamoeba castellanii str. Neff	14926401
ACA1_291600	CDS	ACA1_291600	NW_004457712.1	783168	784700	R	encoded by transcript ACA1_291600A; macro domain containing protein	complement(join(783168..783258,783413..783503,783633..783784,783905..783977,784128..784187,784263..784333,784473..784568,784672..784700))	Acanthamoeba castellanii str. Neff	14926402
ACA1_291610	CDS	ACA1_291610	NW_004457712.1	785127	786188	D	encoded by transcript ACA1_291610A; Kazaltype serine protease inhibitor domain containing protein	join(785127..785273,785379..785539,785608..785779,785880..786188)	Acanthamoeba castellanii str. Neff	14926403
ACA1_291620	CDS	ACA1_291620	NW_004457712.1	786321	786944	R	encoded by transcript ACA1_291620A; DNAdirected RNA polymerase II subunit rpb4, putative	complement(join(786321..786492,786566..786643,786713..786818,786893..786944))	Acanthamoeba castellanii str. Neff	14926404
ACA1_291630	CDS	ACA1_291630	NW_004457712.1	787112	790598	D	encoded by transcript ACA1_291630A; mitochondrion biogenesis protein (Mdm31), putative	join(787112..787206,787356..787426,787485..787605,787730..787762,787946..788022,788135..788227,788319..788436,788540..788605,788716..788907,789031..789087,789311..789460,789568..789656,789752..789827,789906..790024,790102..790181,790302..790466,790548..790598)	Acanthamoeba castellanii str. Neff	14926405
ACA1_291640	CDS	ACA1_291640	NW_004457712.1	791368	795998	D	encoded by transcript ACA1_291640A; RNA recognition motifdomain containing protein	join(791368..791532,791607..791692,791783..792335,792431..792604,792714..792969,793256..793621,793712..793972,794079..794267,794361..794755,794848..795030,795118..795264,795461..795625,795921..795998)	Acanthamoeba castellanii str. Neff	14926406
ACA1_291650	CDS	ACA1_291650	NW_004457712.1	796964	797775	D	encoded by transcript ACA1_291650A; ribosomal protein L24e, putative	join(796964..797044,797158..797271,797346..797482,797619..797775)	Acanthamoeba castellanii str. Neff	14926407
ACA1_291660	CDS	ACA1_291660	NW_004457712.1	798047	801809	R	encoded by transcript ACA1_291660A; ABC2 type transporter superfamily protein	complement(join(798047..798241,798472..798633,798738..798838,798942..799033,799134..799275,799390..799469,799557..799610,799703..799842,799979..800299,800383..800442,800577..800714,800796..800879,800962..801077,801186..801236,801332..801809))	Acanthamoeba castellanii str. Neff	14926408
ACA1_291670	CDS	ACA1_291670	NW_004457712.1	802346	803935	R	encoded by transcript ACA1_291670A; ATPase, AAA domain containing protein	complement(802346..803935)	Acanthamoeba castellanii str. Neff	14926409
ACA1_291690	CDS	ACA1_291690	NW_004457712.1	806963	811012	D	encoded by transcript ACA1_291690A; Nop14 family protein	join(806963..807139,807251..807385,807520..807646,807767..808143,808229..808348,808494..808967,809075..809188,809272..809467,809549..809635,809719..809840,809911..810221,810328..810624,810733..811012)	Acanthamoeba castellanii str. Neff	14926411
ACA1_291700	CDS	ACA1_291700	NW_004457712.1	811333	813306	D	encoded by transcript ACA1_291700A; uncharacterized protein	join(811333..811627,811938..812088,812183..812231,812356..812592,812719..812947,813035..813306)	Acanthamoeba castellanii str. Neff	14926412
ACA1_291710	CDS	ACA1_291710	NW_004457712.1	813365	815631	R	encoded by transcript ACA1_291710A; zinc metalloproteinase STE24, putative	complement(join(813365..813647,813724..813809,813881..813996,814082..814203,814318..814452,814564..814639,814744..814877,814956..815065,815145..815291,815428..815631))	Acanthamoeba castellanii str. Neff	14926413
ACA1_291720	CDS	ACA1_291720	NW_004457712.1	816776	817342	D	encoded by transcript ACA1_291720A; uncharacterized protein	join(816776..816938,817048..817153,817243..817342)	Acanthamoeba castellanii str. Neff	14926414
ACA1_291730	CDS	ACA1_291730	NW_004457712.1	817454	820773	D	encoded by transcript ACA1_291730A; uncharacterized protein	join(817454..817550,817630..817760,817816..817941,818254..818442,818506..818596,818674..818756,818885..818957,819268..819530,819677..819984,820078..820172,820349..820773)	Acanthamoeba castellanii str. Neff	14926415
ACA1_291740	CDS	ACA1_291740	NW_004457712.1	820881	824318	R	encoded by transcript ACA1_291740A; gammaglutamyltransferase	complement(join(820881..821018,821125..821187,821272..821390,821490..821573,821693..821825,822066..822146,822255..822370,822489..822565,822650..822696,822798..822932,823029..823148,823240..823507,823633..823723,823853..824214,824245..824318))	Acanthamoeba castellanii str. Neff	14926416
ACA1_291750	CDS	ACA1_291750	NW_004457712.1	824858	829845	D	encoded by transcript ACA1_291750A; FERM central domain containing protein	join(824858..825299,825619..825704,825891..826113,826218..826426,826534..826707,826811..826969,827041..827130,827237..827815,827915..828309,828400..828622,828731..828883,828995..829078,829194..829330,829464..829607,829725..829845)	Acanthamoeba castellanii str. Neff	14926417
ACA1_291760	CDS	ACA1_291760	NW_004457712.1	829940	832805	R	encoded by transcript ACA1_291760A; ATPase/histidine kinase/DNA gyrase B/HSP90 domain containing protein	complement(join(829940..830784,830915..831152,831249..831381,831488..831773,831983..832160,832293..832805))	Acanthamoeba castellanii str. Neff	14926418
ACA1_291770	CDS	ACA1_291770	NW_004457712.1	833677	835383	R	encoded by transcript ACA1_291770A; MHCK/EF2 kinase domain containing protein	complement(join(833677..834596,834684..834898,835052..835127,835278..835383))	Acanthamoeba castellanii str. Neff	14926419
ACA1_291780	CDS	ACA1_291780	NW_004457712.1	835795	838976	R	encoded by transcript ACA1_291780A; ATPase, AAA domain containing protein	complement(join(835795..836799,838491..838976))	Acanthamoeba castellanii str. Neff	14926420
ACA1_291890	CDS	ACA1_291890	NW_004457712.1	839331	843308	R	encoded by transcript ACA1_291890A; lipase	complement(join(839331..839453,839502..839778,839866..839951,840023..840266,840395..840496,840572..840717,840856..841001,841124..841516,841620..841701,841811..841963,842151..842273,842572..842689,843205..843308))	Acanthamoeba castellanii str. Neff	14926421
ACA1_291900	CDS	ACA1_291900	NW_004457712.1	844228	846745	R	encoded by transcript ACA1_291900A; MORN repeatcontaining protein	complement(join(844228..844829,844915..844985,845164..845306,845401..845522,845642..845813,845887..845970,846063..846160,846252..846371,846508..846745))	Acanthamoeba castellanii str. Neff	14926422
ACA1_291910	CDS	ACA1_291910	NW_004457712.1	846970	850992	R	encoded by transcript ACA1_291910A; zinc finger, C3HC4 type (RING finger) domain containing protein	complement(join(846970..848664,848760..848903,849026..849427,849529..849656,849733..849797,849904..850061,850141..850276,850365..850498,850581..850748,850843..850992))	Acanthamoeba castellanii str. Neff	14926423
ACA1_292020	CDS	ACA1_292020	NW_004457712.1	855097	855507	D	encoded by transcript ACA1_292020A; Dehydrogenase/reductase (SDR family) member 1, putative	join(855097..855220,855341..>855507)	Acanthamoeba castellanii str. Neff	14926424
ACA1_292130	CDS	ACA1_292130	NW_004457712.1	857833	858678	R	encoded by transcript ACA1_292130A; uncharacterized protein	complement(join(857833..857928,858063..858199,858422..858592,858660..858678))	Acanthamoeba castellanii str. Neff	14926425
ACA1_292140	CDS	ACA1_292140	NW_004457712.1	860187	860552	R	encoded by transcript ACA1_292140A; uncharacterized protein	complement(join(860187..860346,860437..860552))	Acanthamoeba castellanii str. Neff	14926426
ACA1_292150	CDS	ACA1_292150	NW_004457712.1	861452	862639	D	encoded by transcript ACA1_292150A; zinc knuckle domain containing protein	join(861452..862078,862142..862639)	Acanthamoeba castellanii str. Neff	14926427
ACA1_292160	CDS	ACA1_292160	NW_004457712.1	864239	864898	D	encoded by transcript ACA1_292160A; Polyprotein, putative	join(864239..864393,864412..864898)	Acanthamoeba castellanii str. Neff	14926428
ACA1_292170	CDS	ACA1_292170	NW_004457712.1	865325	865800	D	encoded by transcript ACA1_292170A; polyprotein	join(865325..865388,865433..865800)	Acanthamoeba castellanii str. Neff	14926429
ACA1_292180	CDS	ACA1_292180	NW_004457712.1	865960	866568	R	encoded by transcript ACA1_292180A; uncharacterized protein	complement(join(865960..866217,866281..>866568))	Acanthamoeba castellanii str. Neff	14926430
ACA1_292190	CDS	ACA1_292190	NW_004457712.1	868364	869381	R	encoded by transcript ACA1_292190A; uncharacterized protein	complement(join(868364..868412,868502..868593,868789..868884,868973..869065,869292..869381))	Acanthamoeba castellanii str. Neff	14926431
ACA1_292310	CDS	ACA1_292310	NW_004457712.1	873620	874283	R	encoded by transcript ACA1_292310A; uncharacterized protein	complement(join(873620..873683,873815..873916,874086..874138,874200..874283))	Acanthamoeba castellanii str. Neff	14926433
ACA1_292420	CDS	ACA1_292420	NW_004457712.1	877517	879218	D	encoded by transcript ACA1_292420A; NLI interacting factor family phosphatase	join(877517..877997,878301..879089,879190..879218)	Acanthamoeba castellanii str. Neff	14926434
ACA1_292440	CDS	ACA1_292440	NW_004457712.1	887132	891823	D	encoded by transcript ACA1_292440A; SH3 domain containing protein	join(887132..887163,887376..887456,887488..887602,887706..887733,887996..888351,888460..888468,888527..888630,888708..888800,889218..889320,889669..889775,889858..889981,890083..890141,890266..890354,890497..890612,890686..890725,890861..891186,891386..891477,891583..891695,891807..891823)	Acanthamoeba castellanii str. Neff	14926436
ACA1_292650	CDS	ACA1_292650	NW_004457712.1	892092	893069	R	encoded by transcript ACA1_292650A; regulator of g protein signaling domain containing protein	complement(join(892092..892237,892355..892514,892619..892733,892861..893069))	Acanthamoeba castellanii str. Neff	14926437
ACA1_292760	CDS	ACA1_292760	NW_004457712.1	893228	894490	D	encoded by transcript ACA1_292760A; uncharacterized protein	join(893228..893333,893399..893564,893698..893818,893915..893972,893996..894049,894103..894327,894393..894490)	Acanthamoeba castellanii str. Neff	14926438
ACA1_292770	CDS	ACA1_292770	NW_004457712.1	896546	897553	R	encoded by transcript ACA1_292770A; regulator of g protein signaling domain containing protein	complement(join(896546..896691,896809..896968,897084..897198,897345..897553))	Acanthamoeba castellanii str. Neff	14926439
ACA1_292780	CDS	ACA1_292780	NW_004457712.1	897969	899287	R	encoded by transcript ACA1_292780A; NADH:ubiquinone oxidoreductase 24 kDa subunit	complement(join(897969..898148,898294..898388,898485..898603,898698..898951,899123..899287))	Acanthamoeba castellanii str. Neff	14926440
ACA1_292790	CDS	ACA1_292790	NW_004457712.1	899705	902935	D	encoded by transcript ACA1_292790A; protein phosphatase 2C domain containing protein	join(899705..900097,900218..900282,900348..900448,900535..900618,900704..900841,900937..901028,901207..901351,901451..901602,901685..901838,901938..902033,902144..902266,902377..902563,902662..902935)	Acanthamoeba castellanii str. Neff	14926441
ACA1_292800	CDS	ACA1_292800	NW_004457712.1	903028	906643	D	encoded by transcript ACA1_292800A; uncharacterized protein	join(903028..903116,903200..903639,903732..903806,903945..904026,904231..904378,904486..904557,904658..904724,904941..905119,905189..905445,905596..905759,905853..906259,906384..906458,906530..906643)	Acanthamoeba castellanii str. Neff	14926442
ACA1_292810	CDS	ACA1_292810	NW_004457712.1	906753	909044	R	encoded by transcript ACA1_292810A; uncharacterized protein	complement(join(906753..906869,906977..907159,907324..907405,907530..907708,907843..908276,908392..908719,908808..909044))	Acanthamoeba castellanii str. Neff	14926443
ACA1_292820	CDS	ACA1_292820	NW_004457712.1	909329	910357	R	encoded by transcript ACA1_292820A; autophagocytosis associated protein, cterminal domain containing protein	complement(join(909329..909547,909665..909756,909823..910073,910305..910357))	Acanthamoeba castellanii str. Neff	14926444
ACA1_292830	CDS	ACA1_292830	NW_004457712.1	910647	914186	D	encoded by transcript ACA1_292830A; cullin 1, putative	join(910647..910756,910823..910925,910989..911090,911217..911318,911440..911581,911727..911944,912039..912132,912252..912382,912550..912636,912712..912858,912996..913130,913237..913434,913545..914186)	Acanthamoeba castellanii str. Neff	14926445
ACA1_292840	CDS	ACA1_292840	NW_004457712.1	914538	915575	R	encoded by transcript ACA1_292840A; uncharacterized protein	complement(914538..915575)	Acanthamoeba castellanii str. Neff	14926446
ACA1_292850	CDS	ACA1_292850	NW_004457712.1	916150	917307	D	encoded by transcript ACA1_292850A; TBC domain containing protein	916150..917307	Acanthamoeba castellanii str. Neff	14926447
ACA1_292860	CDS	ACA1_292860	NW_004457712.1	917863	920825	D	encoded by transcript ACA1_292860A; ABC transporter related, putative	join(917863..918053,918166..918194,918304..918407,918484..918573,918665..918874,918963..919106,919185..919248,919342..919596,919685..919783,919953..920050,920210..920347,920466..920825)	Acanthamoeba castellanii str. Neff	14926448
ACA1_292870	CDS	ACA1_292870	NW_004457712.1	920937	922617	R	encoded by transcript ACA1_292870A; Ras subfamily protein	complement(join(920937..921521,921635..921746,922416..922474,922540..922617))	Acanthamoeba castellanii str. Neff	14926449
ACA1_292880	CDS	ACA1_292880	NW_004457712.1	922782	927423	R	encoded by transcript ACA1_292880A; RhoGEF domain containing protein	complement(join(922782..923265,923349..923608,923691..923927,924016..924075,924184..924291,924389..924577,924699..924787,924891..926116,926186..927423))	Acanthamoeba castellanii str. Neff	14926450
ACA1_292890	CDS	ACA1_292890	NW_004457712.1	928583	929295	R	encoded by transcript ACA1_292890A; ribosomal protein S17, putative	complement(join(928583..928676,928749..929125,929281..929295))	Acanthamoeba castellanii str. Neff	14926451
ACA1_292900	CDS	ACA1_292900	NW_004457712.1	929503	931696	R	encoded by transcript ACA1_292900A; Tcomplex protein 1, epsilon subunit	complement(join(929503..929627,929728..930046,930164..930349,930428..930872,931013..931299,931373..931510,931604..931696))	Acanthamoeba castellanii str. Neff	14926452
ACA1_292910	CDS	ACA1_292910	NW_004457712.1	932139	933792	D	encoded by transcript ACA1_292910A; branched-chain alpha-KETO ACID decarboxylase E1 beta subunit, putative	join(932139..932246,932429..932809,932908..933063,933173..933478,933556..933792)	Acanthamoeba castellanii str. Neff	14926453
ACA1_292920	CDS	ACA1_292920	NW_004457712.1	933946	935324	R	encoded by transcript ACA1_292920A; Serine/threonineprotein kinase bud32, putative	complement(join(933946..933983,934106..934178,934307..934423,934531..934646,934773..934923,935015..935128,935211..935324))	Acanthamoeba castellanii str. Neff	14926454
ACA1_292930	CDS	ACA1_292930	NW_004457712.1	935605	937082	R	encoded by transcript ACA1_292930A; uncharacterized protein	complement(join(935605..935610,935809..935854,935952..936051,936175..936205,936423..936485,936588..937082))	Acanthamoeba castellanii str. Neff	14926455
ACA1_293040	CDS	ACA1_293040	NW_004457712.1	938683	939707	R	encoded by transcript ACA1_293040A; uncharacterized protein	complement(join(938683..938790,938828..938883,938961..939058,939286..939382,939407..939511,939638..939707))	Acanthamoeba castellanii str. Neff	14926456
ACA1_293050	CDS	ACA1_293050	NW_004457712.1	940102	942615	R	encoded by transcript ACA1_293050A; uncharacterized protein	complement(join(940102..940170,940469..940579,940677..940862,940976..941237,941348..941564,941635..941865,942249..942615))	Acanthamoeba castellanii str. Neff	14926457
ACA1_293160	CDS	ACA1_293160	NW_004457712.1	942768	944878	R	encoded by transcript ACA1_293160A; uncharacterized protein	complement(join(942768..942904,943036..943175,943939..944063,944075..944152,944173..944235,944353..944562,944663..944767,944801..944878))	Acanthamoeba castellanii str. Neff	14926458
ACA1_293270	CDS	ACA1_293270	NW_004457712.1	945400	946259	R	encoded by transcript ACA1_293270A; uncharacterized protein	complement(join(945400..945525,945639..945753,945785..945865,946228..946259))	Acanthamoeba castellanii str. Neff	14926459
ACA1_293580	CDS	ACA1_293580	NW_004457712.1	958614	959619	D	encoded by transcript ACA1_293580A; uncharacterized protein	join(958614..958626,958667..958721,958885..958931,958982..959001,959067..959108,959377..959449,959486..959619)	Acanthamoeba castellanii str. Neff	14926460
ACA1_293590	CDS	ACA1_293590	NW_004457712.1	959872	960102	D	encoded by transcript ACA1_293590A; uncharacterized protein	959872..960102	Acanthamoeba castellanii str. Neff	14926461
ACA1_293700	CDS	ACA1_293700	NW_004457712.1	961421	961983	D	encoded by transcript ACA1_293700A; uncharacterized protein	join(961421..961560,961657..961691,961850..961983)	Acanthamoeba castellanii str. Neff	14926462
ACA1_293710	CDS	ACA1_293710	NW_004457712.1	963065	965612	D	encoded by transcript ACA1_293710A; Fbox domain containing protein	join(963065..963176,963332..963380,963504..963653,963748..963778,963952..964075,964217..964236,964316..964374,964534..964674,964771..964803,964914..964998,965115..965243,965356..965419,965512..965612)	Acanthamoeba castellanii str. Neff	14926463
ACA1_293720	CDS	ACA1_293720	NW_004457712.1	965858	967341	R	encoded by transcript ACA1_293720A; uncharacterized protein	complement(join(965858..966245,966378..966651,966743..967015,967101..967341))	Acanthamoeba castellanii str. Neff	14926464
ACA1_293730	CDS	ACA1_293730	NW_004457712.1	967662	969266	D	encoded by transcript ACA1_293730A; PB1 domain containing protein	join(967662..967823,967896..967952,968062..968202,968296..969082,969175..969266)	Acanthamoeba castellanii str. Neff	14926465
ACA1_293740	CDS	ACA1_293740	NW_004457712.1	969494	973816	R	encoded by transcript ACA1_293740A; uncharacterized protein	complement(join(969494..969626,969729..969799,969948..970082,970189..970272,970356..970451,970627..971105,971210..971321,971435..971519,971600..971787,971902..972019,972148..972248,972328..972426,972620..972736,972835..972970,973050..973161,973295..973348,973459..973636,973670..973816))	Acanthamoeba castellanii str. Neff	14926466
ACA1_293850	CDS	ACA1_293850	NW_004457712.1	974861	975794	R	encoded by transcript ACA1_293850A; Peroxin 22 (Pex22), putative	complement(join(974861..975006,975175..975250,975477..975794))	Acanthamoeba castellanii str. Neff	14926467
ACA1_293860	CDS	ACA1_293860	NW_004457712.1	976422	980696	D	encoded by transcript ACA1_293860A; ubiquitin specific peptidase 16, putative	join(976422..976613,976694..976777,976869..977012,977130..977319,977434..977570,977748..977907,978080..978179,978274..978574,978668..978802,978939..979007,979119..980224,980375..980696)	Acanthamoeba castellanii str. Neff	14926468
ACA1_293870	CDS	ACA1_293870	NW_004457712.1	980844	981856	R	encoded by transcript ACA1_293870A; zinc knuckle domain containing protein	complement(join(980844..981274,981373..981495,981616..981856))	Acanthamoeba castellanii str. Neff	14926469
ACA1_293880	CDS	ACA1_293880	NW_004457712.1	982128	984270	R	encoded by transcript ACA1_293880A; uncharacterized protein	complement(join(982128..982265,982341..982528,982648..982803,982892..983068,983153..983317,983463..983515,983709..983826,983940..984113,984192..984270))	Acanthamoeba castellanii str. Neff	14926470
ACA1_293890	CDS	ACA1_293890	NW_004457712.1	984456	987471	D	encoded by transcript ACA1_293890A; uncharacterized protein	join(984456..984603,984733..984904,985051..985237,985438..985527,985658..985766,985866..986073,986233..986389,986459..986584,986624..986851,986945..987036,987136..987232,987322..987471)	Acanthamoeba castellanii str. Neff	14926471
ACA1_293900	CDS	ACA1_293900	NW_004457712.1	988059	999793	D	encoded by transcript ACA1_293900A; AMP-dependent synthetase and ligase	join(988059..988439,988619..988828,988930..989289,989374..989744,989834..994134,994272..997634,997893..998996,999122..999358,999480..999793)	Acanthamoeba castellanii str. Neff	14926472
ACA1_293900	CDS	ACA1_293900	NW_004457712.1	999987	1001379	D	encoded by transcript ACA1_293900B; AMP-dependent synthetase and ligase	join(999987..1000152,1000289..1000389,1000483..1000626,1000656..1000771,1000841..1000951,1001047..1001157,1001245..1001290,1001335..1001379)	Acanthamoeba castellanii str. Neff	14926472
ACA1_293920	CDS	ACA1_293920	NW_004457712.1	1005421	1006010	R	encoded by transcript ACA1_293920A; uncharacterized protein	complement(join(1005421..1005458,1005561..1005626,1005739..1005799,1005969..1006010))	Acanthamoeba castellanii str. Neff	14926474
ACA1_293930	CDS	ACA1_293930	NW_004457712.1	1006738	1007135	R	encoded by transcript ACA1_293930A; uncharacterized protein	complement(join(1006738..1006862,1006877..1007135))	Acanthamoeba castellanii str. Neff	14926475
ACA1_293940	CDS	ACA1_293940	NW_004457712.1	1007545	1007904	R	encoded by transcript ACA1_293940A; uncharacterized protein	complement(join(1007545..1007704,1007789..1007904))	Acanthamoeba castellanii str. Neff	14926476
ACA1_294260	CDS	ACA1_294260	NW_004457712.1	1020500	1021826	D	encoded by transcript ACA1_294260A; uncharacterized protein	join(1020500..1020707,1020937..1021826)	Acanthamoeba castellanii str. Neff	14926478
ACA1_294480	CDS	ACA1_294480	NW_004457712.1	1027887	1028904	D	encoded by transcript ACA1_294480A; uncharacterized protein	join(1027887..1028028,1028386..1028449,1028585..1028706,1028807..1028904)	Acanthamoeba castellanii str. Neff	14926480
ACA1_294700	CDS	ACA1_294700	NW_004457712.1	1035435	1036663	D	encoded by transcript ACA1_294700A; uncharacterized protein	join(1035435..1035500,1035563..1036399,1036571..1036663)	Acanthamoeba castellanii str. Neff	14926482
ACA1_294810	CDS	ACA1_294810	NW_004457712.1	1037644	1038426	D	encoded by transcript ACA1_294810A; uncharacterized protein	join(1037644..1037751,1038226..1038292,1038372..>1038426)	Acanthamoeba castellanii str. Neff	14926483
ACA1_294830	CDS	ACA1_294830	NW_004457712.1	1042831	1044964	D	encoded by transcript ACA1_294830A; Myblike DNA-binding domain containing protein	join(1042831..1043054,1043229..1043534,1043764..1044964)	Acanthamoeba castellanii str. Neff	14926485
ACA1_294840	CDS	ACA1_294840	NW_004457712.1	1045921	1046683	D	encoded by transcript ACA1_294840A; transcription elongation factor SII, hS-II-T1 isoform 8, putative	join(1045921..1046068,1046187..1046380,1046459..1046683)	Acanthamoeba castellanii str. Neff	14926486
ACA1_294850	CDS	ACA1_294850	NW_004457712.1	1046825	1048659	R	encoded by transcript ACA1_294850A; uncharacterized protein	complement(join(1046825..1046875,1046970..1047051,1047150..1047393,1047521..1047641,1047838..1047858,1048016..1048093,1048207..1048390,1048472..1048659))	Acanthamoeba castellanii str. Neff	14926487
ACA1_294860	CDS	ACA1_294860	NW_004457712.1	1048843	1051493	R	encoded by transcript ACA1_294860A; Vps51/Vps67 protein	complement(join(1048843..1049024,1049243..1049423,1049552..1050074,1050189..1050277,1050415..1050570,1050760..1050807,1050932..1050977,1051075..1051493))	Acanthamoeba castellanii str. Neff	14926488
ACA1_294870	CDS	ACA1_294870	NW_004457712.1	1051623	1053785	R	encoded by transcript ACA1_294870A; Hypothetical protein	complement(join(1051623..1052007,1052118..1052224,1052398..1052555,1052714..1052954,1053130..1053341,1053424..1053688,1053783..1053785))	Acanthamoeba castellanii str. Neff	14926489
ACA1_294880	CDS	ACA1_294880	NW_004457712.1	1054015	1056135	D	encoded by transcript ACA1_294880A; queuine trnaribosyltransferase subfamily protein	join(1054015..1054238,1054363..1054448,1054553..1054839,1055000..1055096,1055215..1055285,1055372..1055549,1055650..1055845,1056021..1056135)	Acanthamoeba castellanii str. Neff	14926490
ACA1_294890	CDS	ACA1_294890	NW_004457712.1	1056308	1058041	D	encoded by transcript ACA1_294890A; uncharacterized protein	join(1056308..1056387,1056579..1056749,1056919..1057642,1057762..1057851,1057949..1058041)	Acanthamoeba castellanii str. Neff	14926491
ACA1_294900	CDS	ACA1_294900	NW_004457712.1	1058340	1066802	R	encoded by transcript ACA1_294900A; cytohesin 2, putative	complement(join(1058340..1058975,1059079..1059309,1059505..1060311,1060465..1060803,1060929..1061143,1061406..1061724,1061899..1062091,1062213..1062375,1062504..1062714,1062804..1063017,1063164..1063345,1063359..1063394,1063493..1063585,1063748..1064033,1064144..1064226,1064325..1064937,1065011..1065093,1065222..1065443,1065648..1065911,1065936..1066003,1066072..1066307,1066615..1066802))	Acanthamoeba castellanii str. Neff	14926492
ACA1_294910	CDS	ACA1_294910	NW_004457712.1	1066571	1067920	D	encoded by transcript ACA1_294910A; uncharacterized protein	join(1066571..1066575,1066613..1066693,1066725..1066839,1066948..1066975,1067035..1067101,1067190..1067498,1067524..1067548,1067771..1067920)	Acanthamoeba castellanii str. Neff	14926494
ACA1_294920	CDS	ACA1_294920	NW_004457712.1	1067996	1068985	D	encoded by transcript ACA1_294920A; PCI domain containing protein	join(1067996..1068081,1068227..1068270,1068308..1068503,1068628..1068718,1068887..1068985)	Acanthamoeba castellanii str. Neff	14926493
ACA1_294930	CDS	ACA1_294930	NW_004457712.1	1069299	1071794	D	encoded by transcript ACA1_294930A; Ulp1 protease family, Cterminal catalytic domain containing protein	join(1069299..1069334,1069569..1070105,1070240..1070664,1070710..1070748,1070761..1071315,1071418..1071652,1071732..1071794)	Acanthamoeba castellanii str. Neff	14926495
ACA1_295040	CDS	ACA1_295040	NW_004457712.1	1072612	1074083	D	encoded by transcript ACA1_295040A; uncharacterized protein	join(<1072612..1072852,1072925..1073120,1073215..1073476,1073553..1073754,1073863..1073943,1074079..1074083)	Acanthamoeba castellanii str. Neff	14926496
ACA1_295150	CDS	ACA1_295150	NW_004457712.1	1078993	1085506	D	encoded by transcript ACA1_295150A; phosphatidylserine decarboxylase	join(1078993..1079077,1079375..1079481,1080291..1080873,1080997..1081119,1081275..1081389,1081570..1081703,1081867..1081998,1082202..1082341,1082556..1082628,1082751..1082873,1082978..1083078,1083204..1083285,1083512..1083618,1083771..1083890,1083985..1084064,1084224..1084348,1084496..1084542,1084704..1084785,1084921..1085002,1085089..1085506)	Acanthamoeba castellanii str. Neff	14926497
ACA1_295260	CDS	ACA1_295260	NW_004457712.1	1085844	1087551	D	encoded by transcript ACA1_295260A; CTP:ethanolaminephosphate cytidylyltransferase	join(1085844..1085960,1086127..1086221,1086441..1086620,1086843..1087551)	Acanthamoeba castellanii str. Neff	14926498
ACA1_295270	CDS	ACA1_295270	NW_004457712.1	1087798	1089355	R	encoded by transcript ACA1_295270A; rhodaneselike domain containing protein	complement(join(1087798..1087863,1087957..1088137,1088305..1088461,1088629..1088673,1088714..1088796,1088878..1089066,1089219..>1089355))	Acanthamoeba castellanii str. Neff	14926499
ACA1_295280	CDS	ACA1_295280	NW_004457712.1	1089702	1090807	D	encoded by transcript ACA1_295280A; uncharacterized protein	join(1089702..1089706,1089822..1090519,1090586..1090666,1090743..1090807)	Acanthamoeba castellanii str. Neff	14926500
ACA1_295290	CDS	ACA1_295290	NW_004457712.1	1091201	1092457	D	encoded by transcript ACA1_295290A; uncharacterized protein	join(1091201..1091266,1091474..1091798,1091871..1091953,1092041..1092457)	Acanthamoeba castellanii str. Neff	14926501
ACA1_295300	CDS	ACA1_295300	NW_004457712.1	1092572	1102402	R	encoded by transcript ACA1_295300A; calponin domain containing protein	complement(join(1092572..1093030,1093146..1093226,1093413..1093545,1093849..1094698,1094826..1095839,1095978..1096068,1096175..1096926,1097099..1097247,1097364..1097893,1097991..1098758,1098924..1099249,1099389..1100061,1100210..1100782,1100966..1101085,1101200..1101309,1101471..1101617,1101774..1101863,1101994..1102152,1102378..1102402))	Acanthamoeba castellanii str. Neff	14926502
ACA1_295310	CDS	ACA1_295310	NW_004457712.1	1102927	1103789	R	encoded by transcript ACA1_295310A; AP-1 complex subunit sigma-2, putative	complement(join(1102927..1102959,1103046..1103144,1103276..1103311,1103386..1103494,1103608..1103789))	Acanthamoeba castellanii str. Neff	14926503
ACA1_295320	CDS	ACA1_295320	NW_004457712.1	1103911	1104913	D	encoded by transcript ACA1_295320A; uncharacterized protein	join(1103911..1104149,1104260..1104376,1104492..1104622,1104699..1104913)	Acanthamoeba castellanii str. Neff	14926504
ACA1_295330	CDS	ACA1_295330	NW_004457712.1	1105744	1107938	D	encoded by transcript ACA1_295330A; homeobox domain containing protein	join(1105744..1107252,1107364..1107837,1107930..1107938)	Acanthamoeba castellanii str. Neff	14926505
ACA1_295340	CDS	ACA1_295340	NW_004457712.1	1108218	1109235	R	encoded by transcript ACA1_295340A; Arl5family small GTPase	complement(join(1108218..1108263,1108388..1108539,1108623..1108706,1108895..1109042,1109126..1109235))	Acanthamoeba castellanii str. Neff	14926506
ACA1_295350	CDS	ACA1_295350	NW_004457712.1	1109379	1112643	R	encoded by transcript ACA1_295350A; RNA binding domain containing protein	complement(join(1109379..1109840,1109969..1110132,1110292..1110414,1110530..1110631,1110754..1110887,1110947..1111122,1111203..1111329,1111436..1111530,1111568..1111733,1111876..1111907,1111956..1111994,1112102..1112188,1112375..1112407,1112488..1112643))	Acanthamoeba castellanii str. Neff	14926507
ACA1_295360	CDS	ACA1_295360	NW_004457712.1	1112785	1113228	D	encoded by transcript ACA1_295360A; DC2like protein	1112785..1113228	Acanthamoeba castellanii str. Neff	14926508
ACA1_295370	CDS	ACA1_295370	NW_004457712.1	1113529	1118058	D	encoded by transcript ACA1_295370A; Ribosome biogenesis protein	join(1113529..1113663,1113851..1114088,1114217..1114335,1114435..1114640,1114758..1114904,1115020..1115336,1115485..1117589,1117783..1118058)	Acanthamoeba castellanii str. Neff	14926509
ACA1_295380	CDS	ACA1_295380	NW_004457712.1	1118395	1122336	D	encoded by transcript ACA1_295380A; Ankyrin repeatcontaining protein	join(1118395..1118451,1118664..1118743,1118863..1119275,1119306..1120486,1120598..1120747,1120851..1121076,1121187..1121346,1121433..1121559,1121680..1121871,1122019..1122132,1122238..1122336)	Acanthamoeba castellanii str. Neff	14926510
ACA1_295390	CDS	ACA1_295390	NW_004457712.1	1122605	1125537	R	encoded by transcript ACA1_295390A; acidstable alpha-amylase	complement(join(1122605..1122698,1122835..1122980,1123075..1123211,1123298..1123313,1123413..1123488,1123613..1123701,1123823..1123957,1124081..1124221,1124362..1124412,1124523..1124678,1124795..1124931,1125129..1125158,1125266..1125353,1125415..1125537))	Acanthamoeba castellanii str. Neff	14926511
ACA1_295400	CDS	ACA1_295400	NW_004457712.1	1125835	1128145	D	encoded by transcript ACA1_295400A; membrane transporter, putative	join(1125835..1126064,1126134..1126310,1126432..1126528,1126633..1126697,1126814..1126897,1126982..1127085,1127206..1127324,1127399..1127564,1127671..1127804,1127942..1128145)	Acanthamoeba castellanii str. Neff	14926512
ACA1_295410	CDS	ACA1_295410	NW_004457712.1	1128451	1128939	R	encoded by transcript ACA1_295410A; peptidylprolyl cis-trans isomerase, FKBP-type domain containing protein	complement(1128451..1128939)	Acanthamoeba castellanii str. Neff	14926513
ACA1_295420	CDS	ACA1_295420	NW_004457712.1	1129036	1131461	R	encoded by transcript ACA1_295420A; Heparan-alpha-glucosaminide N-acetyltransferase	complement(join(1129036..1129177,1129335..1129439,1129533..1129599,1129716..1129872,1129974..1130158,1130306..1130438,1130532..1130656,1130754..1130816,1130990..1131150,1131259..1131461))	Acanthamoeba castellanii str. Neff	14926514
ACA1_295430	CDS	ACA1_295430	NW_004457712.1	1131556	1132977	D	encoded by transcript ACA1_295430A; Nacetyltransferase	join(1131556..1131840,1131925..1131990,1132065..1132448,1132540..1132693,1132778..1132977)	Acanthamoeba castellanii str. Neff	14926515
ACA1_295440	CDS	ACA1_295440	NW_004457712.1	1133251	1133653	R	encoded by transcript ACA1_295440A; small nuclear ribonucleoprotein Sm D1, putative	complement(join(1133251..1133339,1133365..1133653))	Acanthamoeba castellanii str. Neff	14926516
ACA1_295450	CDS	ACA1_295450	NW_004457712.1	1133991	1135160	D	encoded by transcript ACA1_295450A; uncharacterized protein	join(1133991..1134842,1135017..1135160)	Acanthamoeba castellanii str. Neff	14926517
ACA1_295460	CDS	ACA1_295460	NW_004457712.1	1136048	1136883	D	encoded by transcript ACA1_295460A; uncharacterized protein	join(1136048..1136112,1136228..1136333,1136472..1136567,1136743..1136883)	Acanthamoeba castellanii str. Neff	14926518
ACA1_295480	CDS	ACA1_295480	NW_004457712.1	1144075	1147228	D	encoded by transcript ACA1_295480A; uncharacterized protein	join(1144075..1144180,1144983..1145031,1145483..1145560,1146149..1146231,1146303..1146430,1146534..1146810,1146931..1147022,1147135..1147177,1147218..1147228)	Acanthamoeba castellanii str. Neff	14926520
ACA1_295490	CDS	ACA1_295490	NW_004457712.1	1151662	1151856	R	encoded by transcript ACA1_295490A; uncharacterized protein	complement(1151662..1151856)	Acanthamoeba castellanii str. Neff	14926521
ACA1_295500	CDS	ACA1_295500	NW_004457712.1	1152028	1152621	R	encoded by transcript ACA1_295500A; uncharacterized protein	complement(join(1152028..1152237,1152307..1152621))	Acanthamoeba castellanii str. Neff	14926522
ACA1_295510	CDS	ACA1_295510	NW_004457712.1	1154224	1156509	D	encoded by transcript ACA1_295510A; uncharacterized protein	join(1154224..1154250,1154366..1154469,1154565..1154673,1154753..1155062,1155197..1155426,1155515..1155677,1155752..1156170,1156474..1156509)	Acanthamoeba castellanii str. Neff	14926523
ACA1_295520	CDS	ACA1_295520	NW_004457712.1	1156708	1160743	D	encoded by transcript ACA1_295520A; RhoGAP domain containing protein	join(1156708..1157121,1157235..1157475,1157603..1157697,1157817..1157899,1158068..1158143,1158258..1158392,1158617..1158694,1158819..1158945,1159038..1159120,1159222..1159257,1159462..1159563,1159730..1159832,1159931..1159984,1160322..1160743)	Acanthamoeba castellanii str. Neff	14926524
ACA1_295530	CDS	ACA1_295530	NW_004457712.1	1161187	1168252	D	encoded by transcript ACA1_295530A; RhoGEF domain containing protein	join(1161187..1161376,1161581..1161672,1161946..1163754,1163849..1163931,1164074..1164228,1164345..1164545,1164686..1164792,1164911..1165129,1165239..1165439,1165536..1165751,1165856..1165936,1166092..1166196,1166336..1166400,1166479..1166602,1166690..1166746,1166839..1167040,1167173..1167310,1167396..1167720,1167829..1168252)	Acanthamoeba castellanii str. Neff	14926525
ACA1_295540	CDS	ACA1_295540	NW_004457712.1	1168577	1168954	D	encoded by transcript ACA1_295540A; uncharacterized protein	join(1168577..1168632,1168744..1168954)	Acanthamoeba castellanii str. Neff	14926526
ACA1_295550	CDS	ACA1_295550	NW_004457712.1	1169426	1172209	D	encoded by transcript ACA1_295550A; Membranebound O-acyltransferase domain containing protein 2, putative	join(1169426..1169476,1169504..1169770,1169863..1169888,1170044..1170179,1170295..1170440,1170630..1170758,1170866..1170997,1171119..1171222,1171362..1171444,1171577..1171640,1171746..1171879,1171967..1172209)	Acanthamoeba castellanii str. Neff	14926527
ACA1_295560	CDS	ACA1_295560	NW_004457712.1	1172333	1173012	R	encoded by transcript ACA1_295560A; uncharacterized protein	complement(join(1172333..1172523,1172638..1172769,1172928..1173012))	Acanthamoeba castellanii str. Neff	14926528
ACA1_295570	CDS	ACA1_295570	NW_004457712.1	1173365	1176525	D	encoded by transcript ACA1_295570A; ABC2 type transporter superfamily protein	join(1173365..1173746,1173880..1174045,1174136..1174439,1174635..1174763,1174844..1175348,1175422..1175502,1175611..1175753,1175847..1175959,1176055..1176235,1176346..1176525)	Acanthamoeba castellanii str. Neff	14926529
ACA1_295580	CDS	ACA1_295580	NW_004457712.1	1176933	1178532	D	encoded by transcript ACA1_295580A; solute carrier family protein	join(1176933..1177076,1177239..1177433,1177546..1177642,1177750..1177892,1178011..1178149,1178234..1178391,1178467..1178532)	Acanthamoeba castellanii str. Neff	14926530
ACA1_295590	CDS	ACA1_295590	NW_004457712.1	1178858	1180956	R	encoded by transcript ACA1_295590A; guanine nucleotide-binding protein alpha-5 subunit, putative	complement(join(1178858..1178919,1179049..1179165,1179262..1179402,1179517..1179623,1179784..1179893,1179995..1180049,1180164..1180318,1180475..1180662,1180827..1180956))	Acanthamoeba castellanii str. Neff	14926531
ACA1_295600	CDS	ACA1_295600	NW_004457712.1	1181175	1182470	R	encoded by transcript ACA1_295600A; 6phosphogluconolactonase	complement(join(1181175..1181303,1181426..1181563,1181653..1181790,1181912..1182052,1182144..1182161,1182435..1182470))	Acanthamoeba castellanii str. Neff	14926532
ACA1_295610	CDS	ACA1_295610	NW_004457712.1	1183135	1183398	D	encoded by transcript ACA1_295610A; uncharacterized protein	1183135..1183398	Acanthamoeba castellanii str. Neff	14926533
ACA1_295620	CDS	ACA1_295620	NW_004457712.1	1183518	1183985	D	encoded by transcript ACA1_295620A; RNA recognition motif domain containing protein	1183518..1183985	Acanthamoeba castellanii str. Neff	14926534
ACA1_295630	CDS	ACA1_295630	NW_004457712.1	1184236	1186707	R	encoded by transcript ACA1_295630A; leucine rich repeat domain containing protein	complement(join(1184236..1184396,1184438..1184529,1184624..1185573,1185692..1186488,1186683..1186707))	Acanthamoeba castellanii str. Neff	14926535
ACA1_295640	CDS	ACA1_295640	NW_004457712.1	1186886	1187393	R	encoded by transcript ACA1_295640A; helicase associated domain containing protein	complement(join(1186886..1187122,1187265..1187393))	Acanthamoeba castellanii str. Neff	14926536
ACA1_295650	CDS	ACA1_295650	NW_004457712.1	1187856	1188773	R	encoded by transcript ACA1_295650A; uncharacterized protein	complement(1187856..1188773)	Acanthamoeba castellanii str. Neff	14926537
ACA1_295660	CDS	ACA1_295660	NW_004457712.1	1189041	1189940	R	encoded by transcript ACA1_295660A; uncharacterized protein	complement(join(1189041..1189283,1189416..1189665,1189783..1189940))	Acanthamoeba castellanii str. Neff	14926538
ACA1_295670	CDS	ACA1_295670	NW_004457712.1	1190010	1192186	R	encoded by transcript ACA1_295670A; Hypothetical protein	complement(join(1190010..1190235,1190397..1190577,1190680..1190815,1190930..1191046,1191198..1191277,1191368..1191387,1191604..1191738,1191839..1191928,1191997..1192042,1192144..1192186))	Acanthamoeba castellanii str. Neff	14926539
ACA1_295680	CDS	ACA1_295680	NW_004457712.1	1192364	1193696	R	encoded by transcript ACA1_295680A; Hypothetical protein	complement(join(1192364..1192531,1192622..1192700,1192853..1192905,1193004..1193129,1193269..1193370,1193547..1193696))	Acanthamoeba castellanii str. Neff	14926540
ACA1_295690	CDS	ACA1_295690	NW_004457712.1	1193979	1196071	R	encoded by transcript ACA1_295690A; GDPmannose pyrophosphorylase	complement(join(1193979..1194110,1194219..1194322,1194395..1194473,1194563..1194769,1195052..1195207,1195292..1195434,1195557..1195605,1195701..1195781,1195943..1196071))	Acanthamoeba castellanii str. Neff	14926541
ACA1_295700	CDS	ACA1_295700	NW_004457712.1	1196297	1199300	R	encoded by transcript ACA1_295700A; plant auxinresponsive GH3-like protein	complement(join(1196297..1196469,1196553..1197099,1197175..1197278,1197371..1197454,1197580..1197607,1197710..1197841,1197945..1198022,1198110..1198238,1198355..1198552,1198674..1199300))	Acanthamoeba castellanii str. Neff	14926542
ACA1_295710	CDS	ACA1_295710	NW_004457712.1	1200593	1203616	R	encoded by transcript ACA1_295710A; trypsin domain containing protein	complement(join(1200593..1200831,1201000..1201154,1201220..1201346,1201418..1201544,1201634..1201755,1201890..1201937,1202083..1202317,1202556..1202840,1203048..1203135,1203235..1203471,1203537..1203616))	Acanthamoeba castellanii str. Neff	14926543
ACA1_295720	CDS	ACA1_295720	NW_004457712.1	1202873	1203013	D	encoded by transcript ACA1_295720A; uncharacterized protein	1202873..>1203013	Acanthamoeba castellanii str. Neff	14926545
ACA1_295730	CDS	ACA1_295730	NW_004457712.1	1204326	1205620	R	encoded by transcript ACA1_295730A; core histone h2a/h2b/h3/h4 superfamily protein	complement(join(1204326..1204356,1204704..1204837,1204930..1205205,1205270..1205326,1205435..1205620))	Acanthamoeba castellanii str. Neff	14926544
ACA1_295740	CDS	ACA1_295740	NW_004457712.1	1205670	1208099	D	encoded by transcript ACA1_295740A; ureidopropionase, beta, putative	join(1205670..1205733,1205892..1206027,1206190..1206301,1206443..1206520,1206648..1206837,1206967..1207098,1207181..1207343,1207446..1207530,1207799..1207861,1208001..1208099)	Acanthamoeba castellanii str. Neff	14926546
ACA1_295760	CDS	ACA1_295760	NW_004457712.1	1219543	1226082	D	encoded by transcript ACA1_295760A; RasGEF domain containing protein	join(1219543..1219776,1219879..1220068,1220227..1220315,1220474..1221369,1221512..1221606,1221705..1221870,1221955..1222243,1222366..1222530,1222663..1222752,1222868..1222963,1223097..1223220,1223340..1223619,1223738..1223804,1223884..1224696,1224779..1224964,1225066..1225332,1225445..1225629,1225713..1225855,1225961..1226082)	Acanthamoeba castellanii str. Neff	14926548
ACA1_295770	CDS	ACA1_295770	NW_004457712.1	1226259	1226804	R	encoded by transcript ACA1_295770A; Protein yippeelike 1, putative	complement(join(1226259..1226429,1226510..1226581,1226706..1226804))	Acanthamoeba castellanii str. Neff	14926549
ACA1_295780	CDS	ACA1_295780	NW_004457712.1	1227052	1228566	R	encoded by transcript ACA1_295780A; uncharacterized protein	complement(join(1227052..1227069,1227159..1227182,1227332..1227477,1227615..1227741,1227870..1227949,1228091..1228266,1228418..1228566))	Acanthamoeba castellanii str. Neff	14926550
ACA1_295790	CDS	ACA1_295790	NW_004457712.1	1228676	1232118	R	encoded by transcript ACA1_295790A; ubiquitin specific protease, putative	complement(join(1228676..1229338,1229636..1230025,1230109..1230234,1230336..1230507,1230591..1230746,1230859..1230874,1230960..1231092,1231434..1231501,1231637..1231786,1231905..1232118))	Acanthamoeba castellanii str. Neff	14926551
ACA1_295800	CDS	ACA1_295800	NW_004457712.1	1232801	1234237	D	encoded by transcript ACA1_295800A; lipoamide acyltransferase, putative	1232801..1234237	Acanthamoeba castellanii str. Neff	14926552
ACA1_295810	CDS	ACA1_295810	NW_004457712.1	1234621	1238150	D	encoded by transcript ACA1_295810A; zinc finger, C3HC4 type (RING finger) domain containing protein	join(1234621..1234834,1234995..1235551,1235659..1236327,1236408..1236476,1236566..1236755,1236839..1237101,1237226..1237309,1237449..1237589,1237792..1237884,1238013..1238150)	Acanthamoeba castellanii str. Neff	14926553
ACA1_295820	CDS	ACA1_295820	NW_004457712.1	1238381	1240118	D	encoded by transcript ACA1_295820A; uncharacterized protein	join(1238381..1238450,1238615..1238714,1238865..1239457,1239604..1239748,1239848..1240118)	Acanthamoeba castellanii str. Neff	14926554
ACA1_295830	CDS	ACA1_295830	NW_004457712.1	1240626	1241595	D	encoded by transcript ACA1_295830A; uncharacterized protein	join(1240626..1240934,1241164..1241595)	Acanthamoeba castellanii str. Neff	14926555
ACA1_295840	CDS	ACA1_295840	NW_004457712.1	1242152	1243230	D	encoded by transcript ACA1_295840A; Ras subfamily protein	join(1242152..1242391,1242777..1242896,1242982..1243230)	Acanthamoeba castellanii str. Neff	14926556
ACA1_295850	CDS	ACA1_295850	NW_004457712.1	1243658	1246787	D	encoded by transcript ACA1_295850A; lipase	join(1243658..1244078,1244182..1244357,1244417..1244604,1244713..1244846,1244984..1245076,1245196..1245466,1245672..1245759,1245827..1245910,1246078..1246198,1246292..1246474,1246553..1246637,1246720..>1246787)	Acanthamoeba castellanii str. Neff	14926557
ACA1_295860	CDS	ACA1_295860	NW_004457712.1	1246993	1248742	R	encoded by transcript ACA1_295860A; protein kinase domain containing protein	complement(join(1246993..1248078,1248124..1248202,1248279..1248379,1248491..1248742))	Acanthamoeba castellanii str. Neff	14926558
ACA1_295870	CDS	ACA1_295870	NW_004457712.1	1248984	1249364	R	encoded by transcript ACA1_295870A; uncharacterized protein	complement(1248984..1249364)	Acanthamoeba castellanii str. Neff	14926559
ACA1_295880	CDS	ACA1_295880	NW_004457712.1	1249766	1252854	D	encoded by transcript ACA1_295880A; NAD-dependent malic enzyme, putative	join(1249766..1249885,1250038..1250199,1250304..1250439,1250557..1250622,1250694..1250767,1250847..1250924,1251028..1251170,1251266..1251422,1251585..1251755,1251837..1251974,1252078..1252329,1252402..1252585,1252688..1252854)	Acanthamoeba castellanii str. Neff	14926560
ACA1_295890	CDS	ACA1_295890	NW_004457712.1	1253104	1255557	D	encoded by transcript ACA1_295890A; diphthamide biosynthesis protein 2, putative	join(1253104..1253277,1253390..1253459,1253579..1253693,1253782..1253899,1253948..1254373,1254442..1254583,1254642..1254788,1254899..1254974,1255086..1255264,1255346..1255557)	Acanthamoeba castellanii str. Neff	14926561
ACA1_295900	CDS	ACA1_295900	NW_004457712.1	1256481	1257048	R	encoded by transcript ACA1_295900A; uncharacterized protein	complement(join(1256481..1256596,1256658..1257048))	Acanthamoeba castellanii str. Neff	14926562
ACA1_295910	CDS	ACA1_295910	NW_004457712.1	1257207	1258780	D	encoded by transcript ACA1_295910A; minor histocompatibility antigen 13 isoform 1 isoform 11, putative	join(1257207..1257305,1257381..1257794,1257893..1258055,1258203..1258363,1258463..1258780)	Acanthamoeba castellanii str. Neff	14926563
ACA1_295920	CDS	ACA1_295920	NW_004457712.1	1258924	1262176	R	encoded by transcript ACA1_295920A; DENN (AEX-3) domain containing protein	complement(join(1258924..1259331,1259412..1259540,1259650..1259794,1259902..1260132,1260240..1260394,1260489..1260742,1260842..1261079,1261183..1261738,1261915..1261949,1262063..1262176))	Acanthamoeba castellanii str. Neff	14926564
ACA1_295930	CDS	ACA1_295930	NW_004457712.1	1262520	1262997	R	encoded by transcript ACA1_295930A; ribosomal protein L28, putative	complement(join(1262520..1262714,1262908..1262997))	Acanthamoeba castellanii str. Neff	14926565
ACA1_295940	CDS	ACA1_295940	NW_004457712.1	1263360	1264535	R	encoded by transcript ACA1_295940A; LETM1like protein	complement(join(1263360..1263578,1263668..1263934,1264018..1264162,1264249..1264535))	Acanthamoeba castellanii str. Neff	14926566
ACA1_295950	CDS	ACA1_295950	NW_004457712.1	1265157	1266090	R	encoded by transcript ACA1_295950A; uncharacterized protein	complement(join(1265157..1265261,1265412..1265626,1265728..1265864,1265925..1266043,1266067..1266090))	Acanthamoeba castellanii str. Neff	14926567
ACA1_295960	CDS	ACA1_295960	NW_004457712.1	1268262	1269085	D	encoded by transcript ACA1_295960A; uncharacterized protein	join(1268262..1269064,1269076..1269085)	Acanthamoeba castellanii str. Neff	14926568
ACA1_295970	CDS	ACA1_295970	NW_004457712.1	1269225	1271314	R	encoded by transcript ACA1_295970A; Ser/Thr phosphatase family superfamily protein	complement(join(1269225..1269587,1269702..1269830,1269917..1270021,1270288..1270377,1270502..1270606,1270668..1270828,1270980..1271087,1271200..1271314))	Acanthamoeba castellanii str. Neff	14926569
ACA1_295980	CDS	ACA1_295980	NW_004457712.1	1271907	1273304	D	encoded by transcript ACA1_295980A; glycosyltransferase, group 2 domain containing protein	join(1271907..1272059,1272150..1272893,1272999..1273141,1273232..1273304)	Acanthamoeba castellanii str. Neff	14926570
ACA1_295990	CDS	ACA1_295990	NW_004457712.1	1273480	1275787	R	encoded by transcript ACA1_295990A; phosphatidylserine synthase	complement(join(1273480..1273590,1273673..1273727,1273804..1273940,1274092..1274192,1274291..1274355,1274440..1274550,1274629..1274767,1274838..1274915,1275047..1275184,1275264..1275338,1275449..1275597,1275711..1275787))	Acanthamoeba castellanii str. Neff	14926571
ACA1_296000	CDS	ACA1_296000	NW_004457712.1	1275840	1276555	R	encoded by transcript ACA1_296000A; uncharacterized protein	complement(join(1275840..1275937,1276034..1276070,1276150..1276301,1276429..1276555))	Acanthamoeba castellanii str. Neff	14926572
ACA1_296010	CDS	ACA1_296010	NW_004457712.1	1276939	1277454	D	encoded by transcript ACA1_296010A; uncharacterized protein	join(1276939..1277129,1277227..1277281,1277365..1277454)	Acanthamoeba castellanii str. Neff	14926573
ACA1_296020	CDS	ACA1_296020	NW_004457712.1	1278172	1279811	D	encoded by transcript ACA1_296020A; DNA repair protein	join(1278172..1278282,1278359..1278409,1278501..1278596,1278688..1278810,1278888..1278948,1279038..1279249,1279491..1279811)	Acanthamoeba castellanii str. Neff	14926574
ACA1_296030	CDS	ACA1_296030	NW_004457712.1	1280310	1281498	R	encoded by transcript ACA1_296030A; archeobacterial metalloproteinaselike 2, putative	complement(join(1280310..1280574,1280634..1280677,1280765..1280857,1281121..1281174,1281342..1281468,1281479..1281498))	Acanthamoeba castellanii str. Neff	14926575
ACA1_296040	CDS	ACA1_296040	NW_004457712.1	1283820	1284092	R	encoded by transcript ACA1_296040A; uncharacterized protein	complement(1283820..1284092)	Acanthamoeba castellanii str. Neff	14926576
ACA1_296050	CDS	ACA1_296050	NW_004457712.1	1284691	1286330	R	encoded by transcript ACA1_296050A; uncharacterized protein	complement(join(1284691..1285890,1286004..1286330))	Acanthamoeba castellanii str. Neff	14926577
ACA1_296070	CDS	ACA1_296070	NW_004457712.1	1288677	1289148	R	encoded by transcript ACA1_296070A; uncharacterized protein	complement(join(1288677..1288940,1289071..1289148))	Acanthamoeba castellanii str. Neff	14926579
ACA1_296080	CDS	ACA1_296080	NW_004457712.1	1289466	1291361	R	encoded by transcript ACA1_296080A; leucine rich repeat domain containing protein	complement(join(1289466..1289726,1289826..1289964,1290056..1290179,1290261..1290423,1290519..1290625,1290736..1290901,1290987..1291361))	Acanthamoeba castellanii str. Neff	14926580
ACA1_296090	CDS	ACA1_296090	NW_004457712.1	1291561	1293808	R	encoded by transcript ACA1_296090A; ATPase, AAA domain containing protein	complement(join(1291561..1291691,1291787..1291881,1292027..1292129,1292226..1292278,1292353..1292412,1292507..1292577,1292673..1292874,1292973..1293139,1293251..1293333,1293412..1293808))	Acanthamoeba castellanii str. Neff	14926581
ACA1_296100	CDS	ACA1_296100	NW_004457712.1	1294685	1298038	D	encoded by transcript ACA1_296100A; ATPbinding cassette, sub-family B (MDR/TAP), member 7, putative	join(1294685..1294894,1295051..1295153,1295253..1295521,1295611..1295699,1295793..1295880,1295970..1296022,1296194..1296282,1296391..1296464,1296556..1296639,1296739..1296896,1297050..1297179,1297264..1297389,1297519..1297677,1297793..1298038)	Acanthamoeba castellanii str. Neff	14926582
ACA1_296110	CDS	ACA1_296110	NW_004457712.1	1298143	1299454	R	encoded by transcript ACA1_296110A; MORN repeat variantcontaining protein	complement(join(1298143..1298314,1298424..1298503,1298594..1298692,1298821..1298924,1299010..1299095,1299182..1299265,1299375..1299454))	Acanthamoeba castellanii str. Neff	14926583
ACA1_296120	CDS	ACA1_296120	NW_004457712.1	1299871	1301043	D	encoded by transcript ACA1_296120A; uncharacterized protein	join(1299871..1300020,1300388..1300456,1300507..1300546,1300662..1300741,1300873..1301043)	Acanthamoeba castellanii str. Neff	14926584
ACA1_296230	CDS	ACA1_296230	NW_004457712.1	1301268	1302831	D	encoded by transcript ACA1_296230A; zinc knuckle domain containing protein	join(1301268..1301498,1301659..1302831)	Acanthamoeba castellanii str. Neff	14926585
ACA1_296240	CDS	ACA1_296240	NW_004457712.1	1302998	1305187	R	encoded by transcript ACA1_296240A; uncharacterized protein	complement(join(1302998..1303223,1303316..1303421,1303520..1303586,1303672..1303889,1303980..1304096,1304183..1304383,1304530..1305187))	Acanthamoeba castellanii str. Neff	14926586
ACA1_296250	CDS	ACA1_296250	NW_004457712.1	1305799	1307065	D	encoded by transcript ACA1_296250A; Rasrelated protein Rab-32, putative	join(1305799..1305922,1306041..1306103,1306230..1306313,1306403..1306540,1306677..1306762,1306844..1307065)	Acanthamoeba castellanii str. Neff	14926587
ACA1_296260	CDS	ACA1_296260	NW_004457712.1	1307379	1308399	D	encoded by transcript ACA1_296260A; uncharacterized protein	join(1307379..1308042,1308116..1308186,1308256..1308399)	Acanthamoeba castellanii str. Neff	14926588
ACA1_296270	CDS	ACA1_296270	NW_004457712.1	1308547	1310946	R	encoded by transcript ACA1_296270A; deoxyribosephosphate aldolase	complement(join(1308547..1308665,1308778..1308894,1308979..1309137,1309236..1309335,1309707..1309796,1309858..1310065,1310167..1310273,1310410..1310637,1310875..1310946))	Acanthamoeba castellanii str. Neff	14926589
ACA1_296280	CDS	ACA1_296280	NW_004457712.1	1311274	1314355	D	encoded by transcript ACA1_296280A; RhoGEF domain containing protein	join(1311274..1312153,1312240..1312320,1312397..1312485,1312580..1312681,1312776..1312901,1313016..1313132,1313192..1313245,1313358..1313399,1313487..1313574,1313674..1313753,1313834..1313917,1314018..1314122,1314191..1314355)	Acanthamoeba castellanii str. Neff	14926590
ACA1_296290	CDS	ACA1_296290	NW_004457712.1	1314450	1316605	D	encoded by transcript ACA1_296290A; Ras GTPase activation domain containing protein	join(1314450..1314582,1314762..1314854,1314933..1315010,1315096..1315157,1315306..1315374,1315461..1315568,1315682..1315897,1315989..1316087,1316178..1316337,1316415..1316605)	Acanthamoeba castellanii str. Neff	14926591
ACA1_296300	CDS	ACA1_296300	NW_004457712.1	1316699	1317611	D	encoded by transcript ACA1_296300A; Ras GTPase activation domain containing protein	join(1316699..1316769,1316904..1317049,1317140..1317306,1317399..1317611)	Acanthamoeba castellanii str. Neff	14926592
ACA1_296310	CDS	ACA1_296310	NW_004457712.1	1317925	1319687	D	encoded by transcript ACA1_296310A; cysteine proteinase precursor, putative	join(1317925..1318006,1318086..1318171,1318242..1318337,1318502..1318646,1318726..1318932,1319025..1319165,1319240..1319309,1319417..1319547,1319653..1319687)	Acanthamoeba castellanii str. Neff	14926593
ACA1_296320	CDS	ACA1_296320	NW_004457712.1	1320428	1321220	D	encoded by transcript ACA1_296320A; uncharacterized protein	join(1320428..1321026,1321100..1321220)	Acanthamoeba castellanii str. Neff	14926594
ACA1_296330	CDS	ACA1_296330	NW_004457712.1	1321980	1323480	D	encoded by transcript ACA1_296330A; Serine/threonine protein phosphatase, putative	join(1321980..1322129,1322246..1322398,1322497..1322721,1322816..1322891,1322968..1323035,1323127..1323248,1323351..1323480)	Acanthamoeba castellanii str. Neff	14926595
ACA1_296340	CDS	ACA1_296340	NW_004457712.1	1324059	1324607	D	encoded by transcript ACA1_296340A; Actophorin, putative	join(1324059..1324312,1324445..1324607)	Acanthamoeba castellanii str. Neff	14926596
ACA1_296350	CDS	ACA1_296350	NW_004457712.1	1325016	1326728	D	encoded by transcript ACA1_296350A; C2 domain containing protein	join(1325016..1325533,1325618..1325662,1325814..1325871,1325949..1326146,1326234..1326516,1326613..1326728)	Acanthamoeba castellanii str. Neff	14926597
ACA1_296360	CDS	ACA1_296360	NW_004457712.1	1326941	1328839	R	encoded by transcript ACA1_296360A; SUMOactivating enzyme subunit 1, putative	complement(join(1326941..1327017,1327104..1327201,1327303..1327444,1327535..1327636,1327739..1327866,1327965..1328074,1328349..1328492,1328567..1328839))	Acanthamoeba castellanii str. Neff	14926598
ACA1_296370	CDS	ACA1_296370	NW_004457712.1	1328901	1329399	D	encoded by transcript ACA1_296370A; hydroxyisourate hydrolase	join(1328901..1328994,1329068..1329118,1329200..1329399)	Acanthamoeba castellanii str. Neff	14926599
ACA1_296380	CDS	ACA1_296380	NW_004457712.1	1329606	1333053	R	encoded by transcript ACA1_296380A; protein involved in vacuole import and degradation, putative	complement(join(1329606..1329706,1329824..1330058,1330161..1330273,1330372..1330553,1330640..1330791,1330869..1330974,1331059..1331371,1331435..1331510,1331574..1332186,1332260..1332521,1332585..1332682,1332743..1333053))	Acanthamoeba castellanii str. Neff	14926600
ACA1_296390	CDS	ACA1_296390	NW_004457712.1	1333007	1334169	D	encoded by transcript ACA1_296390A; uncharacterized protein	join(1333007..1333066,1333142..1333278,1333380..1333485,1333627..1333715,1333788..1333866,1333969..1334169)	Acanthamoeba castellanii str. Neff	14926602
ACA1_296400	CDS	ACA1_296400	NW_004457712.1	1334276	1335010	R	encoded by transcript ACA1_296400A; uncharacterized protein	complement(1334276..1335010)	Acanthamoeba castellanii str. Neff	14926601
ACA1_296410	CDS	ACA1_296410	NW_004457712.1	1335291	1338224	D	encoded by transcript ACA1_296410A; uncharacterized protein	join(1335291..1335370,1335478..1335650,1335754..1336608,1336695..1338000,1338101..1338224)	Acanthamoeba castellanii str. Neff	14926603
ACA1_296420	CDS	ACA1_296420	NW_004457712.1	1338966	1339365	D	encoded by transcript ACA1_296420A; uncharacterized protein	join(1338966..1339063,1339122..1339365)	Acanthamoeba castellanii str. Neff	14926604
ACA1_296430	CDS	ACA1_296430	NW_004457712.1	1344367	1345923	R	encoded by transcript ACA1_296430A; leucine rich repeat domain containing protein	complement(join(1344367..1344424,1344517..1344939,1345095..1345263,1345298..1345435,1345539..1345923))	Acanthamoeba castellanii str. Neff	14926605
ACA1_296440	CDS	ACA1_296440	NW_004457712.1	1346430	1347706	D	encoded by transcript ACA1_296440A; Hypothetical protein	join(1346430..1346513,1346595..1346667,1346754..1346839,1346990..1347053,1347133..1347275,1347361..1347480,1347569..1347706)	Acanthamoeba castellanii str. Neff	14926606
ACA1_296450	CDS	ACA1_296450	NW_004457712.1	1347750	1348716	D	encoded by transcript ACA1_296450A; acetyltransferase, GNAT superfamily protein	join(1347750..1347836,1347917..1347976,1348039..1348156,1348225..1348343,1348410..1348488,1348592..1348716)	Acanthamoeba castellanii str. Neff	14926607
ACA1_296460	CDS	ACA1_296460	NW_004457712.1	1348959	1350981	D	encoded by transcript ACA1_296460A; uncharacterized protein	join(1348959..1349109,1349242..1349298,1349350..1349564,1349657..1349739,1349846..1349952,1349970..1350056,1350073..1350164,1350269..1350430,1350503..1350599,1350722..1350812,1350897..1350981)	Acanthamoeba castellanii str. Neff	14926608
ACA1_296470	CDS	ACA1_296470	NW_004457712.1	1351242	1353181	D	encoded by transcript ACA1_296470A; aminotransferase, class I/II superfamily protein	join(1351242..1351534,1351698..1351867,1351960..1352059,1352170..1352267,1352333..1352471,1352575..1352659,1352811..1352925,1353036..1353181)	Acanthamoeba castellanii str. Neff	14926609
ACA1_296480	CDS	ACA1_296480	NW_004457712.1	1357382	1358999	R	encoded by transcript ACA1_296480A; gamma carbonic anhydrase	complement(join(1357382..1357543,1357652..1357738,1357826..1357891,1357971..1358056,1358203..1358287,1358411..1358454,1358530..1358673,1358855..1358999))	Acanthamoeba castellanii str. Neff	14926610
ACA1_296490	CDS	ACA1_296490	NW_004457712.1	1359161	1361612	R	encoded by transcript ACA1_296490A; succinylcoa synthetase beta chain, putative	complement(join(1359161..1359235,1359324..1359436,1359535..1359631,1359707..1359795,1359868..1360083,1360181..1360289,1360374..1360507,1360648..1360747,1360816..1360906,1361006..1361099,1361183..1361339,1361499..1361612))	Acanthamoeba castellanii str. Neff	14926611
ACA1_296500	CDS	ACA1_296500	NW_004457712.1	1361943	1364217	D	encoded by transcript ACA1_296500A; DnaJ domain containing protein	join(1361943..1362253,1362313..1362613,1362739..1362813,1362909..1363094,1363135..1363234,1363307..1363502,1363580..1363709,1363804..1364217)	Acanthamoeba castellanii str. Neff	14926612
ACA1_296510	CDS	ACA1_296510	NW_004457712.1	1364758	1371413	D	encoded by transcript ACA1_296510A; phosphate ABC transporter, phosphatebinding protein PstS, putative	join(1364758..1364821,1364903..1365005,1365174..1365234,1365320..1365454,1365510..1365779,1365883..1366536,1366620..1366868,1366939..1367082,1367154..1367289,1367377..1367524,1367593..1367843,1367940..1368199,1368266..1368382,1368455..1368551,1368644..1368905,1368982..1369997,1370120..1370578,1370704..1370909,1370994..1371413)	Acanthamoeba castellanii str. Neff	14926613
ACA1_296520	CDS	ACA1_296520	NW_004457712.1	1371457	1373877	R	encoded by transcript ACA1_296520A; CUE domain containing protein	complement(join(1371457..1371893,1372027..1372300,1372378..1372704,1372825..1372871,1372998..1373132,1373245..1373425,1373535..1373675,1373791..1373877))	Acanthamoeba castellanii str. Neff	14926614
ACA1_296530	CDS	ACA1_296530	NW_004457712.1	1374521	1377754	R	encoded by transcript ACA1_296530A; uncharacterized protein	complement(join(1374521..1374632,1374719..1374870,1374951..1375071,1375137..1375286,1375355..1375437,1375543..1375703,1375861..1375969,1376050..1376159,1376312..1376351,1376489..1376563,1376682..1376737,1376823..1376930,1377063..1377105,1377185..1377249,1377382..1377489,1377580..1377754))	Acanthamoeba castellanii str. Neff	14926615
ACA1_296540	CDS	ACA1_296540	NW_004457712.1	1378726	1379177	R	encoded by transcript ACA1_296540A; SH3 domain containing protein	complement(join(1378726..1378904,1378979..1379177))	Acanthamoeba castellanii str. Neff	14926616
ACA1_296550	CDS	ACA1_296550	NW_004457712.1	1379756	1382258	D	encoded by transcript ACA1_296550A; uncharacterized protein	join(1379756..1380115,1380208..1380372,1380507..1380590,1380670..1380790,1380881..1380988,1381085..1381174,1381350..1381450,1381581..1382098,1382186..1382258)	Acanthamoeba castellanii str. Neff	14926617
ACA1_296560	CDS	ACA1_296560	NW_004457712.1	1382427	1385507	R	encoded by transcript ACA1_296560A; P protein	complement(join(1382427..1382605,1382717..1382902,1383029..1383422,1383505..1383740,1383823..1384049,1384183..1384360,1384422..1384581,1384738..1384956,1385166..1385507))	Acanthamoeba castellanii str. Neff	14926618
ACA1_296570	CDS	ACA1_296570	NW_004457712.1	1386006	1386962	D	encoded by transcript ACA1_296570A; TRANSMEMBRANE PROTEIN, putative	join(1386006..1386012,1386168..1386317,1386386..1386553,1386633..1386723,1386821..1386962)	Acanthamoeba castellanii str. Neff	14926619
ACA1_296580	CDS	ACA1_296580	NW_004457712.1	1387162	1389758	R	encoded by transcript ACA1_296580A; transporter, major facilitator subfamily protein	complement(join(1387162..1387451,1387577..1387832,1387964..1388038,1388134..1388276,1388371..1388548,1388650..1388708,1388798..1388978,1389082..1389237,1389354..1389758))	Acanthamoeba castellanii str. Neff	14926620
ACA1_296610	CDS	ACA1_296610	NW_004457712.1	1404678	1405545	R	encoded by transcript ACA1_296610A; Type-1 histone deacetylase 1, putative	complement(join(1404678..1404805,1404895..1404988,1405080..1405222,1405311..1405545))	Acanthamoeba castellanii str. Neff	14926623
ACA1_296720	CDS	ACA1_296720	NW_004457712.1	1408608	1410486	R	encoded by transcript ACA1_296720A; histone deacetylase 1, putative	complement(join(1408608..1408630,1409064..1409406,1409484..1409764,1409871..1409945,1410065..1410295,1410453..1410486))	Acanthamoeba castellanii str. Neff	14926624
ACA1_296830	CDS	ACA1_296830	NW_004457712.1	1410788	1412851	D	encoded by transcript ACA1_296830A; peptidase C19 family protein	join(1410788..1410920,1410989..1411062,1411156..1411551,1411622..1411858,1411949..1412113,1412205..1412342,1412442..1412631,1412718..1412851)	Acanthamoeba castellanii str. Neff	14926625
ACA1_296840	CDS	ACA1_296840	NW_004457712.1	1413536	1415190	D	encoded by transcript ACA1_296840A; SNARE associated Golgi protein	join(1413536..1413823,1413927..1414108,1414183..1414254,1414412..1414523,1414662..1414722,1414824..1414921,1415164..1415190)	Acanthamoeba castellanii str. Neff	14926626
ACA1_296850	CDS	ACA1_296850	NW_004457712.1	1415488	1416925	D	encoded by transcript ACA1_296850A; Ubiquitinconjugating enzyme E2 T, putative	join(1415488..1415608,1415665..1415734,1416133..1416238,1416298..1416411,1416508..1416618,1416722..1416925)	Acanthamoeba castellanii str. Neff	14926627
ACA1_296860	CDS	ACA1_296860	NW_004457712.1	1417081	1418739	D	encoded by transcript ACA1_296860A; putative snoRNA binding domain containing protein	join(1417081..1417398,1417492..1417633,1417727..1418739)	Acanthamoeba castellanii str. Neff	14926628
ACA1_296880	CDS	ACA1_296880	NW_004457712.1	1421582	1422722	R	encoded by transcript ACA1_296880A; uncharacterized protein	complement(join(1421582..1421714,1421790..1421884,1421991..1422145,1422200..1422380,1422444..1422587,1422666..1422722))	Acanthamoeba castellanii str. Neff	14926630
ACA1_296890	CDS	ACA1_296890	NW_004457712.1	1422961	1427598	D	encoded by transcript ACA1_296890A; dynamin domain containing protein	join(1422961..1424289,1424604..1424961,1425052..1425200,1425265..1425415,1425522..1425590,1425676..1426754,1426845..1427324,1427422..1427598)	Acanthamoeba castellanii str. Neff	14926631
ACA1_296900	CDS	ACA1_296900	NW_004457712.1	1429087	1431025	D	encoded by transcript ACA1_296900A; uncharacterized protein	join(1429087..1430175,1430249..1430356,1430438..1430464,1430948..1431025)	Acanthamoeba castellanii str. Neff	14926632
ACA1_296910	CDS	ACA1_296910	NW_004457712.1	1431418	1433355	R	encoded by transcript ACA1_296910A; peptidase M16 inactive domain containing protein	complement(join(1431418..1431729,1431740..1432308,1432396..1433053,1433182..1433355))	Acanthamoeba castellanii str. Neff	14926633
ACA1_296920	CDS	ACA1_296920	NW_004457712.1	1433746	1435639	D	encoded by transcript ACA1_296920A; adenylyl cyclaseassociated protein	join(1433746..1434204,1434322..1434525,1434615..1434816,1434883..1435037,1435107..1435382,1435475..1435639)	Acanthamoeba castellanii str. Neff	14926634
ACA1_296930	CDS	ACA1_296930	NW_004457712.1	1436046	1439406	D	encoded by transcript ACA1_296930A; Cirhin isoform 3, putative	join(1436046..1436141,1436249..1436374,1436480..1436633,1436711..1436876,1437017..1437219,1437368..1437466,1437587..1437876,1438013..1438176,1438276..1438384,1438511..1438630,1438720..1438907,1439017..1439137,1439254..1439406)	Acanthamoeba castellanii str. Neff	14926635
ACA1_296950	CDS	ACA1_296950	NW_004457712.1	1443492	1446796	R	encoded by transcript ACA1_296950A; Fbox domain containing protein	complement(join(1443492..1443658,1443746..1443804,1443873..1443936,1444031..1444108,1444267..1444416,1444586..1444670,1444792..1444927,1445140..1445264,1445378..1445457,1445581..1445643,1445917..1446343,1446434..1446464,1446572..1446686,1446763..1446796))	Acanthamoeba castellanii str. Neff	14926637
ACA1_296960	CDS	ACA1_296960	NW_004457712.1	1447027	1450261	R	encoded by transcript ACA1_296960A; Gpatch domain containing protein	complement(join(1447027..1447263,1447362..1447505,1447608..1447781,1447867..1447983,1448393..1448695,1448727..1448908,1448980..1449109,1449134..1450261))	Acanthamoeba castellanii str. Neff	14926638
ACA1_296970	CDS	ACA1_296970	NW_004457712.1	1450452	1452078	R	encoded by transcript ACA1_296970A; kelch domain containing 1, putative	complement(join(1450452..1450600,1450707..1450790,1450956..1451117,1451188..1451235,1451315..1451419,1451489..1451620,1451694..1451782,1451873..1452078))	Acanthamoeba castellanii str. Neff	14926639
ACA1_296980	CDS	ACA1_296980	NW_004457712.1	1452309	1453523	R	encoded by transcript ACA1_296980A; histone chaperone rttp106 family protein	complement(join(1452309..1452473,1452557..1452761,1452874..1453028,1453203..1453523))	Acanthamoeba castellanii str. Neff	14926640
ACA1_297090	CDS	ACA1_297090	NW_004457712.1	1453645	1454689	R	encoded by transcript ACA1_297090A; kelch repeatcontaining protein	complement(join(1453645..1453876,1453966..1454049,1454209..1454370,1454443..1454490,1454574..1454689))	Acanthamoeba castellanii str. Neff	14926641
ACA1_109690	CDS	ACA1_109690	NW_004457710.1	420	2393	D	encoded by transcript ACA1_109690A; transmembrane and coiled-coil domains 1 family protein	join(420..480,578..655,760..962,1092..1185,1266..1303,1589..1650,2052..2118,2238..2393)	Acanthamoeba castellanii str. Neff	14926083
ACA1_109700	CDS	ACA1_109700	NW_004457710.1	3674	4554	R	encoded by transcript ACA1_109700A; uncharacterized protein	complement(join(3674..3691,3747..3853,4149..4181,4280..4380,4529..4554))	Acanthamoeba castellanii str. Neff	14926027
ACA1_109710	CDS	ACA1_109710	NW_004457710.1	4629	7078	D	encoded by transcript ACA1_109710A; FYVE zinc finger domain containing protein	join(4629..4938,5088..5198,5320..5510,5603..5899,5952..6029,6134..6227,6325..6472,6543..6947,7012..7078)	Acanthamoeba castellanii str. Neff	14926028
ACA1_109720	CDS	ACA1_109720	NW_004457710.1	7400	9142	R	encoded by transcript ACA1_109720A; calponin domain containing protein	complement(join(7400..8386,8533..8715,8777..8846,8942..9044,9133..9142))	Acanthamoeba castellanii str. Neff	14926029
ACA1_109730	CDS	ACA1_109730	NW_004457710.1	9446	13283	R	encoded by transcript ACA1_109730A; replication factor rfc1 c terminal domain containing protein	complement(join(9446..10303,10428..10678,10798..11089,11207..11257,11346..11630,11734..11958,12041..12281,12384..12984,13077..13183,13261..13283))	Acanthamoeba castellanii str. Neff	14926030
ACA1_109740	CDS	ACA1_109740	NW_004457710.1	13727	17100	R	encoded by transcript ACA1_109740A; Myblike DNA-binding domain containing protein	complement(join(13727..13963,14067..14195,14269..14387,14464..14679,14798..14873,14987..15113,15201..15415,15486..15776,15848..15964,16216..16277,16354..16399,16580..16713,16833..17100))	Acanthamoeba castellanii str. Neff	14926031
ACA1_109750	CDS	ACA1_109750	NW_004457710.1	17375	18618	R	encoded by transcript ACA1_109750A; lightoid family protein	complement(join(17375..17553,17666..17753,17882..17929,18028..18117,18207..18326,18422..18483,18555..18618))	Acanthamoeba castellanii str. Neff	14926032
ACA1_109760	CDS	ACA1_109760	NW_004457710.1	18985	20128	R	encoded by transcript ACA1_109760A; uncharacterized protein	complement(join(18985..19317,19408..19667,19678..19747,19836..19928,19960..20050,20100..20128))	Acanthamoeba castellanii str. Neff	14926033
ACA1_109770	CDS	ACA1_109770	NW_004457710.1	20587	23455	D	encoded by transcript ACA1_109770A; WD40 repeat-containing protein	join(20587..20682,20778..20833,20988..21117,21358..21593,21770..21862,22022..22080,22222..22249,22431..22620,22714..22809,22976..23063,23193..23278,23363..23455)	Acanthamoeba castellanii str. Neff	14926034
ACA1_109780	CDS	ACA1_109780	NW_004457710.1	23492	26708	R	encoded by transcript ACA1_109780A; ATPase, AAA domain containing protein	complement(join(23492..23566,23662..23817,23959..24202,24289..24463,24672..24731,24808..24917,25077..25203,25304..25393,25563..26356,26500..26708))	Acanthamoeba castellanii str. Neff	14926035
ACA1_109790	CDS	ACA1_109790	NW_004457710.1	27289	31108	D	encoded by transcript ACA1_109790A; glutamate5-semialdehyde dehydrogenase	join(27289..27597,27765..27805,27922..28021,28188..28211,28224..28463,28603..28642,28803..28867,29029..29365,29542..30203,30460..30640,30737..30799,30915..31108)	Acanthamoeba castellanii str. Neff	14926036
ACA1_109800	CDS	ACA1_109800	NW_004457710.1	31257	33485	R	encoded by transcript ACA1_109800A; WD domain, Gbeta repeat containing protein	complement(join(31257..31415,31600..32079,32197..32312,32551..32758,32920..32990,33181..33290,33388..33485))	Acanthamoeba castellanii str. Neff	14926037
ACA1_109810	CDS	ACA1_109810	NW_004457710.1	33718	34756	D	encoded by transcript ACA1_109810A; ankyrin repeat-containing protein	join(33718..33787,34039..34208,34437..34584,34701..34756)	Acanthamoeba castellanii str. Neff	14926038
ACA1_109920	CDS	ACA1_109920	NW_004457710.1	35326	37514	R	encoded by transcript ACA1_109920A; Myblike DNA-binding domain containing protein	complement(join(35326..35435,35522..35675,35752..35934,36145..36921,37130..37271,37408..37514))	Acanthamoeba castellanii str. Neff	14926039
ACA1_110040	CDS	ACA1_110040	NW_004457710.1	42198	43836	D	encoded by transcript ACA1_110040A; galactosyltransferase	join(42198..42547,42666..42742,42930..43026,43100..43192,43341..43433,43579..43619,43715..43836)	Acanthamoeba castellanii str. Neff	14926041
ACA1_110050	CDS	ACA1_110050	NW_004457710.1	44524	45323	D	encoded by transcript ACA1_110050A; uncharacterized protein	join(44524..44937,45066..45323)	Acanthamoeba castellanii str. Neff	14926042
ACA1_110060	CDS	ACA1_110060	NW_004457710.1	47558	50960	R	encoded by transcript ACA1_110060A; initiation factor, subunit 2 family protein	complement(join(47558..47698,47763..47839,47921..48113,48185..48362,48470..48614,48705..48864,48973..49091,49167..49257,49405..49517,49646..49829,49874..50236,50312..50405,50518..50654,50727..50830,50918..50960))	Acanthamoeba castellanii str. Neff	14926043
ACA1_110070	CDS	ACA1_110070	NW_004457710.1	51419	53933	D	encoded by transcript ACA1_110070A; acetyltransferase, GNAT family	join(51419..51478,51642..52139,52280..52429,52648..52998,53269..53499,53685..53805,53881..53933)	Acanthamoeba castellanii str. Neff	14926044
ACA1_110080	CDS	ACA1_110080	NW_004457710.1	54299	54822	R	encoded by transcript ACA1_110080A; uncharacterized protein	complement(join(54299..54439,54718..54822))	Acanthamoeba castellanii str. Neff	14926045
ACA1_110090	CDS	ACA1_110090	NW_004457710.1	57180	58997	D	encoded by transcript ACA1_110090A; DEAD/DEAH box helicase domain containing protein	join(<57180..57254,57279..58997)	Acanthamoeba castellanii str. Neff	14926046
ACA1_110100	CDS	ACA1_110100	NW_004457710.1	59285	64427	R	encoded by transcript ACA1_110100A; protein kinase	complement(join(59285..60677,60798..60937,61118..61312,61470..61701,61852..62069,62201..62398,62535..62699,62796..62933,63045..63149,63340..63473,63573..63653,63773..63810,63923..64125,64302..64427))	Acanthamoeba castellanii str. Neff	14926047
ACA1_110110	CDS	ACA1_110110	NW_004457710.1	64763	67917	D	encoded by transcript ACA1_110110A; FAD binding domain containing protein	join(64763..64967,65268..65339,65562..65639,65810..65937,66146..66214,66445..66543,66707..66843,67010..67078,67401..67917)	Acanthamoeba castellanii str. Neff	14926048
ACA1_110120	CDS	ACA1_110120	NW_004457710.1	68880	69635	D	encoded by transcript ACA1_110120A; uncharacterized protein	join(68880..69095,69180..69316,69423..69563,69596..69635)	Acanthamoeba castellanii str. Neff	14926049
ACA1_110130	CDS	ACA1_110130	NW_004457710.1	69993	72024	R	encoded by transcript ACA1_110130A; MOSC domain containing protein	complement(join(69993..70202,70338..70458,70492..70570,70718..70763,70919..71002,71187..71372,71486..71704,71776..72024))	Acanthamoeba castellanii str. Neff	14926050
ACA1_110140	CDS	ACA1_110140	NW_004457710.1	72418	74341	R	encoded by transcript ACA1_110140A; uncharacterized protein	complement(join(72418..72782,73432..73668,73798..74341))	Acanthamoeba castellanii str. Neff	14926051
ACA1_110250	CDS	ACA1_110250	NW_004457710.1	74471	77542	R	encoded by transcript ACA1_110250A; histone deacetylase	complement(join(74471..74641,74744..74941,75170..75273,75391..75438,75625..75706,75820..75917,76140..76214,76309..76340,76421..76661,76755..76982,77089..77224,77315..77458,77534..77542))	Acanthamoeba castellanii str. Neff	14926052
ACA1_110260	CDS	ACA1_110260	NW_004457710.1	77728	78318	D	encoded by transcript ACA1_110260A; uncharacterized protein	77728..78318	Acanthamoeba castellanii str. Neff	14926053
ACA1_110270	CDS	ACA1_110270	NW_004457710.1	78714	80165	R	encoded by transcript ACA1_110270A; uncharacterized protein	complement(78714..80165)	Acanthamoeba castellanii str. Neff	14926054
ACA1_110280	CDS	ACA1_110280	NW_004457710.1	81311	83825	R	encoded by transcript ACA1_110280A; cysteine-tRNA ligase	complement(join(81311..81370,81485..81589,81699..81866,82012..82080,82252..82395,82570..82649,82732..82949,83052..83193,83295..83430,83513..83641,83724..>83825))	Acanthamoeba castellanii str. Neff	14926055
ACA1_110290	CDS	ACA1_110290	NW_004457710.1	84369	84779	D	encoded by transcript ACA1_110290A; uncharacterized protein	join(84369..84603,84670..84779)	Acanthamoeba castellanii str. Neff	14926056
ACA1_110300	CDS	ACA1_110300	NW_004457710.1	84920	87316	D	encoded by transcript ACA1_110300A; RNA polymerase	join(84920..85307,85510..85678,85764..85878,85988..86102,86199..86318,86396..86555,86647..86737,86834..87316)	Acanthamoeba castellanii str. Neff	14926057
ACA1_110310	CDS	ACA1_110310	NW_004457710.1	87448	88976	R	encoded by transcript ACA1_110310A; 11beta-hydroxysteroid dehydrogenase-like, putative	complement(join(87448..87615,87724..87875,87946..88138,88241..88331,88405..88524,88709..88787,88862..88976))	Acanthamoeba castellanii str. Neff	14926058
ACA1_110320	CDS	ACA1_110320	NW_004457710.1	88891	92026	D	encoded by transcript ACA1_110320A; DEAD/DEAH box helicase	join(88891..88995,89418..89507,89623..90009,90113..90323,90411..90982,91117..91206,91321..91471,91605..91749,91846..92026)	Acanthamoeba castellanii str. Neff	14926060
ACA1_110330	CDS	ACA1_110330	NW_004457710.1	92275	94783	D	encoded by transcript ACA1_110330A; ubiquitin carboxyl-terminal hydrolase	join(92275..92724,92834..92927,93095..93285,93421..93498,93577..93694,93791..93957,94081..94148,94239..94634,94717..94783)	Acanthamoeba castellanii str. Neff	14926059
ACA1_110340	CDS	ACA1_110340	NW_004457710.1	94964	96766	D	encoded by transcript ACA1_110340A; uncharacterized protein	join(94964..95430,95457..96241,96322..96397,96483..96542,96655..96766)	Acanthamoeba castellanii str. Neff	14926061
ACA1_110350	CDS	ACA1_110350	NW_004457710.1	96902	104445	R	encoded by transcript ACA1_110350A; BRCA2 repeat-containing protein	complement(join(96902..96982,97117..97960,98071..98235,98320..98420,98502..98703,98774..98864,98952..99392,99511..99625,99771..99942,100034..100154,100243..100285,100367..100539,100699..100853,100939..101064,101137..101204,101378..101477,101578..101647,101729..101970,102058..102790,102912..103953,104047..104445))	Acanthamoeba castellanii str. Neff	14926062
ACA1_110370	CDS	ACA1_110370	NW_004457710.1	105978	106517	R	encoded by transcript ACA1_110370A; uncharacterized protein	complement(105978..106517)	Acanthamoeba castellanii str. Neff	14926064
ACA1_110390	CDS	ACA1_110390	NW_004457710.1	107638	108926	D	encoded by transcript ACA1_110390A; Ras-related protein Rab-2-B	join(107638..107838,107966..108048,108143..108234,108406..108521,108655..108738,108840..108926)	Acanthamoeba castellanii str. Neff	14926066
ACA1_110400	CDS	ACA1_110400	NW_004457710.1	109495	112965	D	encoded by transcript ACA1_110400A; PPR repeat-containing protein	join(109495..109498,109646..109842,109959..110115,110275..110648,110745..110840,111014..111140,111199..111299,111396..111473,111571..111761,111908..111926,112025..112129,112267..112965)	Acanthamoeba castellanii str. Neff	14926067
ACA1_110410	CDS	ACA1_110410	NW_004457710.1	113150	114879	R	encoded by transcript ACA1_110410A; SAP domain containing protein	complement(join(113150..113242,113329..113427,113516..114297,114410..114556,114611..114671,114769..114879))	Acanthamoeba castellanii str. Neff	14926068
ACA1_110420	CDS	ACA1_110420	NW_004457710.1	115590	120403	D	encoded by transcript ACA1_110420A; CAAX amino terminal protease family protein	join(115590..115646,115732..115860,115957..116131,116230..116327,116412..116647,116732..116832,116993..117288,117358..117423,117562..117660,117759..117928,118053..118284,118346..120403)	Acanthamoeba castellanii str. Neff	14926069
ACA1_110430	CDS	ACA1_110430	NW_004457710.1	120412	124101	R	encoded by transcript ACA1_110430A; o ubiquitin protein ligase E3A	complement(join(120412..120676,120750..120868,120953..121059,121395..121545,121636..121752,121861..121980,122084..122185,122267..122497,122601..122939,123048..123167,123254..123303,123398..123437,123555..123809,124030..124101))	Acanthamoeba castellanii str. Neff	14926070
ACA1_110440	CDS	ACA1_110440	NW_004457710.1	124510	127713	R	encoded by transcript ACA1_110440A; malate/Llactate dehydrogenase	complement(join(124510..125478,125567..125705,125769..125875,125954..126071,126279..126399,126465..126629,126702..126796,126869..126968,127079..127174,127251..127713))	Acanthamoeba castellanii str. Neff	14926071
ACA1_110450	CDS	ACA1_110450	NW_004457710.1	128167	129401	R	encoded by transcript ACA1_110450A; glutamine synthetase	complement(join(128167..129165,129309..129401))	Acanthamoeba castellanii str. Neff	14926072
ACA1_110460	CDS	ACA1_110460	NW_004457710.1	130376	132167	D	encoded by transcript ACA1_110460A; uncharacterized protein	join(130376..130385,130424..130528,130622..130684,130801..131291,131365..131483,131572..131686,131849..131908,131985..132167)	Acanthamoeba castellanii str. Neff	14926073
ACA1_110470	CDS	ACA1_110470	NW_004457710.1	133172	134439	D	encoded by transcript ACA1_110470A; GTPase	join(133172..133279,133372..133899,133979..134111,134180..134439)	Acanthamoeba castellanii str. Neff	14926074
ACA1_110480	CDS	ACA1_110480	NW_004457710.1	134497	135618	D	encoded by transcript ACA1_110480A; NTPase	join(134497..134526,134702..134842,135041..135066,135118..135178,135296..135478,135544..135618)	Acanthamoeba castellanii str. Neff	14926075
ACA1_110490	CDS	ACA1_110490	NW_004457710.1	136361	139003	R	encoded by transcript ACA1_110490A; methyltransferase	complement(join(136361..137140,137263..137518,137720..137834,137959..138064,138134..138178,138313..138479,138558..138706,138799..138845,138935..139003))	Acanthamoeba castellanii str. Neff	14926076
ACA1_110500	CDS	ACA1_110500	NW_004457710.1	139416	140792	D	encoded by transcript ACA1_110500A; ubiquitin-conjugating enzyme, putative	join(139416..140017,140100..140301,140401..140480,140600..140792)	Acanthamoeba castellanii str. Neff	14926077
ACA1_110510	CDS	ACA1_110510	NW_004457710.1	140947	144964	D	encoded by transcript ACA1_110510A; HEAT repeat domain containing protein	join(140947..141176,141263..141410,141499..141578,141671..141828,141928..142056,142156..142330,142454..142565,142637..142756,142974..143191,143403..143493,143589..143710,143792..143838,143868..144305,144408..144604,144674..144964)	Acanthamoeba castellanii str. Neff	14926078
ACA1_110520	CDS	ACA1_110520	NW_004457710.1	145038	147144	R	encoded by transcript ACA1_110520A; Bbox zinc finger domain containing protein	complement(join(145038..145274,145309..147144))	Acanthamoeba castellanii str. Neff	14926079
ACA1_110530	CDS	ACA1_110530	NW_004457710.1	147346	147576	D	encoded by transcript ACA1_110530A; polyubiqutin	147346..147576	Acanthamoeba castellanii str. Neff	14926080
ACA1_110540	CDS	ACA1_110540	NW_004457710.1	148165	151328	R	encoded by transcript ACA1_110540A; uncharacterized protein	complement(join(148165..148403,148485..148614,150723..150836,150918..151019,151122..151328))	Acanthamoeba castellanii str. Neff	14926081
ACA1_110750	CDS	ACA1_110750	NW_004457710.1	153535	155160	D	encoded by transcript ACA1_110750A; RNA polymerase I large subunit	join(<153535..153695,153777..153876,153950..154021,154095..154707,154809..>155160)	Acanthamoeba castellanii str. Neff	14926082
ACA1_030720	CDS	ACA1_030720	NW_004457709.1	9838	10533	D	encoded by transcript ACA1_030720A; uncharacterized protein	9838..10533	Acanthamoeba castellanii str. Neff	14926026
ACA1_030730	CDS	ACA1_030730	NW_004457709.1	10635	15202	D	encoded by transcript ACA1_030730A; Telomere length regulation protein TEL2, putative	join(10635..11248,11322..11444,11522..11573,11657..11781,11856..12481,12573..12625,12714..12950,13023..13227,13307..13387,13468..13562,13666..13763,13850..13968,14049..14151,14239..14399,14479..14545,14629..14752,14873..15024,15106..15202)	Acanthamoeba castellanii str. Neff	14926017
ACA1_030740	CDS	ACA1_030740	NW_004457709.1	15514	18860	R	encoded by transcript ACA1_030740A; Znfinger in Ran binding protein	complement(join(15514..15893,15976..16186,16282..16856,16952..17039,17151..17239,17349..17492,17591..17653,17743..17825,17921..17981,18086..18161,18278..18424,18579..18860))	Acanthamoeba castellanii str. Neff	14926018
ACA1_030750	CDS	ACA1_030750	NW_004457709.1	19086	19832	D	encoded by transcript ACA1_030750A; uncharacterized protein	join(19086..19194,19271..19388,19465..19510,19577..19684,19761..19832)	Acanthamoeba castellanii str. Neff	14926019
ACA1_030760	CDS	ACA1_030760	NW_004457709.1	19972	20810	D	encoded by transcript ACA1_030760A; uncharacterized protein	join(19972..20002,20149..20451,20569..20810)	Acanthamoeba castellanii str. Neff	14926020
ACA1_030770	CDS	ACA1_030770	NW_004457709.1	21671	23777	D	encoded by transcript ACA1_030770A; Fbox domain containing protein	join(21671..21775,21868..21963,22049..22141,22223..22375,22444..22578,22625..22717,22794..22866,22948..23028,23109..23256,23342..23462,23532..23777)	Acanthamoeba castellanii str. Neff	14926021
ACA1_030780	CDS	ACA1_030780	NW_004457709.1	23902	33201	R	encoded by transcript ACA1_030780A; ATPase family protein	complement(join(23902..24112,24187..24272,24429..24556,24669..24763,24848..25000,25111..25205,25287..25376,25498..25601,25736..25941,26043..26173,26248..26420,26497..27255,27365..27470,27576..27652,27730..27846,27916..28190,28281..28441,28504..28589,28652..28956,29029..29117,29198..29309,29393..29451,29796..29916,30210..30299,30364..30517,30590..30815,30895..30982,31055..31112,31337..31432,31503..31694,31772..31876,31972..32062,32141..32268,32363..32531,32613..32682,32766..32845,32909..32961,33030..33201))	Acanthamoeba castellanii str. Neff	14926022
ACA1_030790	CDS	ACA1_030790	NW_004457709.1	34445	35295	D	encoded by transcript ACA1_030790A; uncharacterized protein	join(34445..34581,34711..34758,34969..35151,35220..35295)	Acanthamoeba castellanii str. Neff	14926023
ACA1_030800	CDS	ACA1_030800	NW_004457709.1	35401	38052	D	encoded by transcript ACA1_030800A; HMG (high mobility group) box domain containing protein	join(35401..36051,36136..36342,36427..36621,36706..36905,37007..37082,37164..37392,37461..37678,37744..38052)	Acanthamoeba castellanii str. Neff	14926024
ACA1_030810	CDS	ACA1_030810	NW_004457709.1	38396	39264	D	encoded by transcript ACA1_030810A; thioredoxin domain containing protein	join(38396..38697,38879..39054,39164..>39264)	Acanthamoeba castellanii str. Neff	14926025
ACA1_301530	CDS	ACA1_301530	NW_004457707.1	228	1975	R	encoded by transcript ACA1_301530A; zinc finger domain containing protein	complement(join(228..773,843..1024,1095..1211,1295..1406,1502..1722,1753..1975))	Acanthamoeba castellanii str. Neff	14926016
ACA1_301540	CDS	ACA1_301540	NW_004457707.1	2177	3230	R	encoded by transcript ACA1_301540A; PAP2 superfamily domain containing protein	complement(join(2177..2384,2509..2583,2662..2742,2814..2904,2990..3230))	Acanthamoeba castellanii str. Neff	14926000
ACA1_301550	CDS	ACA1_301550	NW_004457707.1	3420	9208	D	encoded by transcript ACA1_301550A; UBA/TSN domain containing protein	join(3420..3473,3663..3939,4046..4199,4292..4369,4457..4581,4675..4787,4891..5409,5483..5627,5694..5788,5910..6100,6199..6379,6547..6894,7001..7169,7259..7355,7446..7484,7573..7674,7786..7912,7988..8097,8281..8353,8450..8569,8665..8812,8918..9028,9132..9208)	Acanthamoeba castellanii str. Neff	14926001
ACA1_301560	CDS	ACA1_301560	NW_004457707.1	9465	10250	D	encoded by transcript ACA1_301560A; PH domain containing protein	join(9465..9657,9760..9836,9900..9981,10018..10250)	Acanthamoeba castellanii str. Neff	14926002
ACA1_301570	CDS	ACA1_301570	NW_004457707.1	10412	11010	R	encoded by transcript ACA1_301570A; NLI interacting factor domain containing protein	complement(join(10412..10459,10522..10647,10738..10779,10888..11010))	Acanthamoeba castellanii str. Neff	14926003
ACA1_301680	CDS	ACA1_301680	NW_004457707.1	14569	18581	D	encoded by transcript ACA1_301680A; uncharacterized protein	join(14569..15478,15599..15684,16015..16350,16456..16699,16825..16934,17111..17200,17317..17442,17486..17498,17556..17815,17964..18581)	Acanthamoeba castellanii str. Neff	14926004
ACA1_301690	CDS	ACA1_301690	NW_004457707.1	18662	19651	R	encoded by transcript ACA1_301690A; Gephyrin, putative	complement(join(18662..18766,18866..18938,19056..19137,19206..19266,19327..19413,19514..19651))	Acanthamoeba castellanii str. Neff	14926005
ACA1_301700	CDS	ACA1_301700	NW_004457707.1	20333	21256	R	encoded by transcript ACA1_301700A; uncharacterized protein	complement(join(20333..20427,20543..20653,20784..20854,20956..21077,21158..21256))	Acanthamoeba castellanii str. Neff	14926006
ACA1_301710	CDS	ACA1_301710	NW_004457707.1	21495	22673	R	encoded by transcript ACA1_301710A; seed maturation protein PM34, putative	complement(join(21495..21632,21704..21758,21836..22027,22103..22212,22287..22673))	Acanthamoeba castellanii str. Neff	14926007
ACA1_301720	CDS	ACA1_301720	NW_004457707.1	23071	28761	D	encoded by transcript ACA1_301720A; amidohydrolase domain containing protein	join(23071..23280,23434..23645,23956..24045,24126..24171,24241..24392,24549..24672,24761..24857,24955..25093,25199..25300,25431..25561,25628..25966,26115..26354,26430..26584,26671..26784,26875..26967,27110..27309,27418..27484,27589..27744,27855..28265,28382..28463,28526..28761)	Acanthamoeba castellanii str. Neff	14926008
ACA1_301740	CDS	ACA1_301740	NW_004457707.1	32472	34839	R	encoded by transcript ACA1_301740A; uncharacterized protein	complement(join(32472..32650,32744..32857,32935..33046,33121..33190,33273..33544,33638..33813,34061..34201,34331..34621,34767..34839))	Acanthamoeba castellanii str. Neff	14926010
ACA1_301750	CDS	ACA1_301750	NW_004457707.1	35533	36399	R	encoded by transcript ACA1_301750A; uncharacterized protein	complement(join(35533..35816,35949..36399))	Acanthamoeba castellanii str. Neff	14926011
ACA1_301860	CDS	ACA1_301860	NW_004457707.1	41171	45297	D	encoded by transcript ACA1_301860A; phosphatidylinositol 3- and 4-kinase	join(41171..41550,41711..41819,41903..42033,42114..42492,42571..42766,42855..43000,43089..43938,44031..44083,44179..44246,44345..44465,44556..44731,44818..45004,45097..45297)	Acanthamoeba castellanii str. Neff	14926012
ACA1_301870	CDS	ACA1_301870	NW_004457707.1	45646	49581	D	encoded by transcript ACA1_301870A; leucine rich repeat domain containing protein	join(45646..47309,47350..47549,47663..47818,47927..48109,48183..48351,48467..48701,48768..48954,49034..49352,49467..49581)	Acanthamoeba castellanii str. Neff	14926013
ACA1_301980	CDS	ACA1_301980	NW_004457707.1	54096	55722	D	encoded by transcript ACA1_301980A; WD domain, G-beta repeat-containing protein	join(54096..54133,54221..54320,54385..54458,54913..55165,55238..55323,55428..55530,55612..55722)	Acanthamoeba castellanii str. Neff	14926014
ACA1_302190	CDS	ACA1_302190	NW_004457707.1	56075	56711	D	encoded by transcript ACA1_302190A; phosphoglucomutase 2, putative	join(56075..56234,56392..56522,56598..>56711)	Acanthamoeba castellanii str. Neff	14926015
ACA1_321320	CDS	ACA1_321320	NW_004457705.1	69	836	R	encoded by transcript ACA1_321320A; ubiquitin-conjugating enzyme, putative	complement(join(69..106,199..598,801..836))	Acanthamoeba castellanii str. Neff	14925999
ACA1_321330	CDS	ACA1_321330	NW_004457705.1	1012	2645	D	encoded by transcript ACA1_321330A; uncharacterized protein	join(1012..1165,1303..2456,2535..2645)	Acanthamoeba castellanii str. Neff	14925987
ACA1_321340	CDS	ACA1_321340	NW_004457705.1	3035	5281	D	encoded by transcript ACA1_321340A; uncharacterized protein	join(3035..3283,3391..3681,3769..3857,3945..4409,4508..4600,4713..4741,5026..5075,5225..5281)	Acanthamoeba castellanii str. Neff	14925988
ACA1_321350	CDS	ACA1_321350	NW_004457705.1	5731	10781	R	encoded by transcript ACA1_321350A; leucine rich repeat domain containing protein	complement(join(5731..5768,5867..6012,6098..6176,6299..6350,6450..6511,6632..6818,6907..7143,7257..7342,7424..7560,7742..7881,8001..8137,8284..8431,8541..8678,8774..8920,9048..9200,9278..9319,9405..9582,9715..9857,10217..10350,10491..10573,10765..10781))	Acanthamoeba castellanii str. Neff	14925989
ACA1_321370	CDS	ACA1_321370	NW_004457705.1	13278	14093	R	encoded by transcript ACA1_321370A; ubiquinol cytochrome reductase transmembrane region, putative	complement(join(13278..13361,13470..14093))	Acanthamoeba castellanii str. Neff	14925991
ACA1_321380	CDS	ACA1_321380	NW_004457705.1	14592	21951	D	encoded by transcript ACA1_321380A; RasGEF domain containing protein	join(14592..15275,15389..15734,15877..15988,16104..16194,16282..16435,16510..16678,16797..16908,16999..17097,17165..17227,17368..17484,17615..17740,17860..17952,18089..18224,18351..18563,18645..18703,18817..18943,19075..19156,19261..19428,19549..19630,19777..19876,20003..20085,20248..20397,20494..20586,20684..20864,21115..21247,21339..21951)	Acanthamoeba castellanii str. Neff	14925992
ACA1_321390	CDS	ACA1_321390	NW_004457705.1	22197	23228	D	encoded by transcript ACA1_321390A; uncharacterized protein	join(22197..22583,22611..23228)	Acanthamoeba castellanii str. Neff	14925993
ACA1_321400	CDS	ACA1_321400	NW_004457705.1	23613	25389	D	encoded by transcript ACA1_321400A; encystationmediating serine proteinase	join(23613..23694,23763..23855,23931..24045,24110..24221,24292..24374,24458..24620,24700..24856,24923..25389)	Acanthamoeba castellanii str. Neff	14925994
ACA1_321410	CDS	ACA1_321410	NW_004457705.1	25774	27045	D	encoded by transcript ACA1_321410A; uncharacterized protein	join(25774..25875,25961..26212,26492..26554,26631..26732,26803..27045)	Acanthamoeba castellanii str. Neff	14925995
ACA1_321430	CDS	ACA1_321430	NW_004457705.1	29133	29858	R	encoded by transcript ACA1_321430A; uncharacterized protein	complement(join(29133..29290,29369..29455,29514..29600,29681..29858))	Acanthamoeba castellanii str. Neff	14925997
ACA1_321440	CDS	ACA1_321440	NW_004457705.1	30136	31560	D	encoded by transcript ACA1_321440A; uncharacterized protein	join(30136..30359,30623..30739,30834..30964,31107..31178,31267..31391,31468..31560)	Acanthamoeba castellanii str. Neff	14925998
ACA1_309790	CDS	ACA1_309790	NW_004457704.1	6110	7274	R	encoded by transcript ACA1_309790A; uncharacterized protein	complement(join(6110..6319,6388..6750,6826..7156,7192..7274))	Acanthamoeba castellanii str. Neff	14925986
ACA1_309800	CDS	ACA1_309800	NW_004457704.1	7964	10224	D	encoded by transcript ACA1_309800A; variant sh3 domain containing protein	join(7964..8079,8187..8343,8442..8513,8591..8676,8769..8842,8907..9000,9136..9325,9435..9488,9554..9656,9688..9787,9859..9977,10007..10036,10121..10224)	Acanthamoeba castellanii str. Neff	14925985
ACA1_309810	CDS	ACA1_309810	NW_004457704.1	10427	12393	R	encoded by transcript ACA1_309810A; Rad9 protein	complement(join(10427..10714,10816..10941,11021..11040,11116..11246,11312..11489,11584..11693,11797..11896,11975..12077,12182..12236,12362..12393))	Acanthamoeba castellanii str. Neff	14925980
ACA1_309820	CDS	ACA1_309820	NW_004457704.1	13669	16025	D	encoded by transcript ACA1_309820A; RhoGEF domain containing protein	join(13669..14343,14491..14607,14706..14813,14905..15000,15075..15236,15347..15427,15514..15643,15733..16025)	Acanthamoeba castellanii str. Neff	14925981
ACA1_309830	CDS	ACA1_309830	NW_004457704.1	16305	16589	R	encoded by transcript ACA1_309830A; uncharacterized protein	complement(join(16305..16424,16518..16589))	Acanthamoeba castellanii str. Neff	14925982
ACA1_309840	CDS	ACA1_309840	NW_004457704.1	16784	18699	D	encoded by transcript ACA1_309840A; 1-aminocyclopropane-1-carboxylate deaminase	join(16784..16985,17056..17130,17268..17702,17722..17849,17906..18017,18109..18264,18348..18427,18496..18699)	Acanthamoeba castellanii str. Neff	14925983
ACA1_309850	CDS	ACA1_309850	NW_004457704.1	18937	20854	D	encoded by transcript ACA1_309850A; RhoGAP domain containing protein	join(18937..19489,19637..19762,19866..19952,20086..20153,20193..20250,20326..20460,20592..>20854)	Acanthamoeba castellanii str. Neff	14925984
ACA1_170770	CDS	ACA1_170770	NW_004457702.1	75	1173	R	encoded by transcript ACA1_170770A; ubiquitin specific protease 39 and snrnp assembly factor, putative	complement(join(<75..374,407..556,671..750,918..1173))	Acanthamoeba castellanii str. Neff	14925979
ACA1_170780	CDS	ACA1_170780	NW_004457702.1	2678	2803	D	encoded by transcript ACA1_170780A; uncharacterized protein	<2678..>2803	Acanthamoeba castellanii str. Neff	14925567
ACA1_170790	CDS	ACA1_170790	NW_004457702.1	2954	3501	R	encoded by transcript ACA1_170790A; uncharacterized protein	complement(join(2954..2973,3252..3501))	Acanthamoeba castellanii str. Neff	14925555
ACA1_170800	CDS	ACA1_170800	NW_004457702.1	4081	6284	R	encoded by transcript ACA1_170800A; integrase core domain containing protein	complement(join(4081..4099,4273..4408,4481..6284))	Acanthamoeba castellanii str. Neff	14925556
ACA1_170810	CDS	ACA1_170810	NW_004457702.1	10533	13448	D	encoded by transcript ACA1_170810A; CDPalcohol phosphatidyltransferase superfamily protein	join(10533..10597,10697..10789,10951..11054,11208..11317,11460..11563,11734..11828,12117..12249,12572..12676,12758..12839,13056..13234,13349..13448)	Acanthamoeba castellanii str. Neff	14925557
ACA1_170820	CDS	ACA1_170820	NW_004457702.1	13713	14524	R	encoded by transcript ACA1_170820A; uncharacterized protein	complement(join(13713..13828,13935..14038,14385..14524))	Acanthamoeba castellanii str. Neff	14925558
ACA1_170940	CDS	ACA1_170940	NW_004457702.1	18965	20239	D	encoded by transcript ACA1_170940A; 20S proteasome alpha subunit C, putative	join(18965..19010,19080..19208,19276..19387,19508..19596,19671..19754,19851..20018,20112..20239)	Acanthamoeba castellanii str. Neff	14925560
ACA1_170950	CDS	ACA1_170950	NW_004457702.1	20409	20854	D	encoded by transcript ACA1_170950A; DWNN domain containing protein	join(20409..20577,20790..20854)	Acanthamoeba castellanii str. Neff	14925561
ACA1_170960	CDS	ACA1_170960	NW_004457702.1	20961	25984	D	encoded by transcript ACA1_170960A; uncharacterized protein	join(20961..21025,21137..21267,21411..21579,21780..21940,22143..22207,22401..22542,22655..22768,22893..23197,23345..23403,23514..23610,23956..24032,24313..25616,25728..25984)	Acanthamoeba castellanii str. Neff	14925562
ACA1_170970	CDS	ACA1_170970	NW_004457702.1	26233	32567	R	encoded by transcript ACA1_170970A; protein kinase domain containing protein	complement(join(26233..26273,26342..26552,26687..26756,26883..26964,27124..27247,27369..27491,27707..27768,27916..28015,28153..28204,28665..28741,28952..29003,29199..29520,29661..29930,30048..30253,30414..30509,30661..30730,30856..30952,31030..31116,31251..31441,31547..31690,31789..31876,32000..32101,32285..32409,32504..32567))	Acanthamoeba castellanii str. Neff	14925563
ACA1_171090	CDS	ACA1_171090	NW_004457702.1	38676	39475	R	encoded by transcript ACA1_171090A; cytochrome-c oxidase	complement(join(38676..38756,38843..38908,39037..39322,39462..39475))	Acanthamoeba castellanii str. Neff	14925565
ACA1_171100	CDS	ACA1_171100	NW_004457702.1	40216	42196	D	encoded by transcript ACA1_171100A; VATPase subunit A, putative	join(40216..40760,40908..41089,41175..42196)	Acanthamoeba castellanii str. Neff	14925566
ACA1_171110	CDS	ACA1_171110	NW_004457702.1	42535	44150	R	encoded by transcript ACA1_171110A; carrier superfamily protein	complement(join(42535..42762,42892..43057,43135..43235,43318..43441,43570..43661,43783..43872,44025..44150))	Acanthamoeba castellanii str. Neff	14925568
ACA1_171220	CDS	ACA1_171220	NW_004457702.1	45122	46658	D	encoded by transcript ACA1_171220A; uncharacterized protein	join(45122..45163,45329..45727,45762..45854,45911..46198,46260..46658)	Acanthamoeba castellanii str. Neff	14925569
ACA1_171230	CDS	ACA1_171230	NW_004457702.1	48375	51192	D	encoded by transcript ACA1_171230A; Arf GTPase activating protein	join(48375..48470,48575..48636,48810..48897,48985..49095,49336..49438,49861..49986,50081..50155,50386..50562,50639..50716,50844..50877,50964..51192)	Acanthamoeba castellanii str. Neff	14925570
ACA1_171240	CDS	ACA1_171240	NW_004457702.1	51322	52975	R	encoded by transcript ACA1_171240A; ribosomal protein L7Ae protein	complement(join(51322..51471,51566..51673,51721..51894,51994..52465,52560..52610,52690..52806,52902..52975))	Acanthamoeba castellanii str. Neff	14925571
ACA1_171250	CDS	ACA1_171250	NW_004457702.1	53107	59511	D	encoded by transcript ACA1_171250A; NADbinding domain 4 domain containing protein	join(53107..53160,53306..53321,53471..53585,53666..53816,53891..54078,54165..54284,54369..54470,54566..54692,54833..54985,55082..55250,55356..55471,55589..55688,55757..55848,55931..56016,56096..56158,56251..56331,56406..56499,56594..56736,56820..56908,56983..57188,57267..57356,57518..57809,57890..58012,58086..58304,58374..58498,58581..58687,58768..58867,58941..58991,59084..59196,59290..59394,59457..59511)	Acanthamoeba castellanii str. Neff	14925572
ACA1_171260	CDS	ACA1_171260	NW_004457702.1	59652	60814	R	encoded by transcript ACA1_171260A; uncharacterized protein	complement(join(59652..60427,60517..60814))	Acanthamoeba castellanii str. Neff	14925573
ACA1_171270	CDS	ACA1_171270	NW_004457702.1	61050	61923	D	encoded by transcript ACA1_171270A; uncharacterized protein	join(61050..61587,61652..61923)	Acanthamoeba castellanii str. Neff	14925574
ACA1_171280	CDS	ACA1_171280	NW_004457702.1	62109	65736	D	encoded by transcript ACA1_171280A; nicotinate phosphoribosyltransferase	join(62109..62273,62362..62457,62557..62616,63007..63075,63178..63324,63554..63603,63616..63688,63780..63855,63927..64032,64121..64217,64292..64371,64503..64641,64722..64817,64904..65091,65169..65302,65600..65736)	Acanthamoeba castellanii str. Neff	14925575
ACA1_171290	CDS	ACA1_171290	NW_004457702.1	66925	68691	D	encoded by transcript ACA1_171290A; uncharacterized protein	66925..68691	Acanthamoeba castellanii str. Neff	14925576
ACA1_171300	CDS	ACA1_171300	NW_004457702.1	69032	70503	R	encoded by transcript ACA1_171300A; uncharacterized protein	complement(join(69032..69220,69387..69498,69584..69713,69907..69997,70063..70503))	Acanthamoeba castellanii str. Neff	14925577
ACA1_171310	CDS	ACA1_171310	NW_004457702.1	70792	73159	D	encoded by transcript ACA1_171310A; uncharacterized protein	join(70792..71007,71101..71155,71224..71333,71393..71546,71618..71778,71862..72006,72075..72136,72210..72321,72416..72567,72678..72793,72902..72977,73001..73159)	Acanthamoeba castellanii str. Neff	14925578
ACA1_171320	CDS	ACA1_171320	NW_004457702.1	73564	76318	D	encoded by transcript ACA1_171320A; von Willebrand factor type A domain containing protein	join(73564..73644,73742..73832,73922..74037,74159..74405,74502..74658,74738..75016,75164..75431,75519..75862,75946..76154,76245..76318)	Acanthamoeba castellanii str. Neff	14925579
ACA1_171330	CDS	ACA1_171330	NW_004457702.1	76881	79185	D	encoded by transcript ACA1_171330A; Nitrilase/cyanide hydratase and apolipoprotein Nacyltransferase	join(76881..77004,77120..77320,77401..77666,77737..77785,77856..77949,78015..78067,78132..78398,78551..78575,78662..78830,78936..78966,79043..79185)	Acanthamoeba castellanii str. Neff	14925580
ACA1_171340	CDS	ACA1_171340	NW_004457702.1	79933	83832	D	encoded by transcript ACA1_171340A; uncharacterized protein	join(79933..80042,80210..80273,80393..80425,80449..80659,80738..80873,80964..81064,81155..81230,81312..81395,81461..81510,81579..81659,81727..81853,81934..82016,82092..82151,82240..82314,82584..82714,82789..83058,83154..83355,83441..83593,83690..83832)	Acanthamoeba castellanii str. Neff	14925581
ACA1_171360	CDS	ACA1_171360	NW_004457702.1	87681	88067	D	encoded by transcript ACA1_171360A; uncharacterized protein	87681..88067	Acanthamoeba castellanii str. Neff	14925583
ACA1_171370	CDS	ACA1_171370	NW_004457702.1	88400	88973	D	encoded by transcript ACA1_171370A; uncharacterized protein	join(88400..88475,88510..88541,88617..88973)	Acanthamoeba castellanii str. Neff	14925584
ACA1_171380	CDS	ACA1_171380	NW_004457702.1	89332	90539	D	encoded by transcript ACA1_171380A; COMM domain containing protein 8, putative	join(89332..89496,89573..89734,89785..89891,90019..90103,90176..90243,90341..90431,90516..90539)	Acanthamoeba castellanii str. Neff	14925585
ACA1_171390	CDS	ACA1_171390	NW_004457702.1	90814	94597	R	encoded by transcript ACA1_171390A; protein kinase domain containing protein	complement(join(90814..90912,90992..91129,91343..91464,91541..91742,91866..92052,92142..92243,92324..92433,92493..92605,92693..92763,92876..93449,93554..93672,93802..93914,94271..94597))	Acanthamoeba castellanii str. Neff	14925586
ACA1_171400	CDS	ACA1_171400	NW_004457702.1	94747	98156	R	encoded by transcript ACA1_171400A; ATPase/histidine kinase/DNA gyrase B/HSP90 domain containing protein	complement(join(94747..94782,95181..95276,95313..95365,95453..95534,95621..95700,95783..95946,96018..96424,96450..96637,96728..97474,97538..97776,97861..98156))	Acanthamoeba castellanii str. Neff	14925587
ACA1_171410	CDS	ACA1_171410	NW_004457702.1	99154	100794	D	encoded by transcript ACA1_171410A; FAD binding domain containing protein	join(99154..99275,99357..99410,99491..99584,99646..99757,99839..99993,100086..100207,100282..100360,100458..100580,100663..100794)	Acanthamoeba castellanii str. Neff	14925588
ACA1_171420	CDS	ACA1_171420	NW_004457702.1	100918	101401	D	encoded by transcript ACA1_171420A; berberine and berberine like domain containing protein	join(100918..100956,101016..101108,101183..101401)	Acanthamoeba castellanii str. Neff	14925589
ACA1_171430	CDS	ACA1_171430	NW_004457702.1	102046	104926	D	encoded by transcript ACA1_171430A; uncharacterized protein	join(102046..102141,102319..102473,102604..102729,102866..102987,103091..103211,103297..103696,103773..103812,103927..104120,104222..104926)	Acanthamoeba castellanii str. Neff	14925590
ACA1_171440	CDS	ACA1_171440	NW_004457702.1	105000	109492	R	encoded by transcript ACA1_171440A; UvrD/REP helicase subfamily protein	complement(join(105000..105891,105971..106075,106171..106287,106397..106510,106679..107177,107245..107653,107737..107802,107874..107987,108079..108346,108415..108771,108864..109005,109093..109492))	Acanthamoeba castellanii str. Neff	14925591
ACA1_171450	CDS	ACA1_171450	NW_004457702.1	109647	110816	D	encoded by transcript ACA1_171450A; PeptidyltRNA hydrolase	join(109647..109700,109816..109893,109955..110057,110139..110262,110352..110400,110476..110561,110660..110816)	Acanthamoeba castellanii str. Neff	14925592
ACA1_171460	CDS	ACA1_171460	NW_004457702.1	111000	111364	R	encoded by transcript ACA1_171460A; uncharacterized protein	complement(join(111000..111172,111244..111364))	Acanthamoeba castellanii str. Neff	14925593
ACA1_171470	CDS	ACA1_171470	NW_004457702.1	111609	113342	D	encoded by transcript ACA1_171470A; cystinosis, nephropathic, putative	join(111609..111648,111715..111778,111914..111983,112033..112174,112266..112327,112611..112692,112788..112874,112961..113066,113150..113342)	Acanthamoeba castellanii str. Neff	14925594
ACA1_171480	CDS	ACA1_171480	NW_004457702.1	113486	115814	D	encoded by transcript ACA1_171480A; uncharacterized protein	join(113486..114082,114155..114251,114362..115502,115517..115814)	Acanthamoeba castellanii str. Neff	14925595
ACA1_171490	CDS	ACA1_171490	NW_004457702.1	116030	120847	D	encoded by transcript ACA1_171490A; PH domain containing protein	join(116030..116560,116671..116762,116840..116891,117004..117086,117221..117443,117537..117629,117756..117813,117921..117996,118078..118175,118291..118332,118404..118590,118669..119372,119529..119642,119734..119823,119932..120061,120213..120425,120532..120847)	Acanthamoeba castellanii str. Neff	14925596
ACA1_171500	CDS	ACA1_171500	NW_004457702.1	120947	122467	R	encoded by transcript ACA1_171500A; uridine kinase	complement(join(120947..121030,121150..121221,121393..121490,121559..121631,121699..121768,121843..121945,122017..122086,122180..122234,122331..122467))	Acanthamoeba castellanii str. Neff	14925597
ACA1_171510	CDS	ACA1_171510	NW_004457702.1	122948	124541	D	encoded by transcript ACA1_171510A; HemolysinIII related subfamily protein	join(122948..123128,123247..123468,123609..123762,123878..123975,124085..124153,124230..124291,124401..124541)	Acanthamoeba castellanii str. Neff	14925598
ACA1_171520	CDS	ACA1_171520	NW_004457702.1	124651	127844	R	encoded by transcript ACA1_171520A; DNA repair helicase rad25 subfamily protein	complement(join(124651..124760,124844..124907,125019..125124,125213..125321,125493..125608,125754..125834,125910..126034,126136..126303,126529..126691,126814..126903,126981..127156,127292..127420,127521..127619,127698..127844))	Acanthamoeba castellanii str. Neff	14925599
ACA1_171630	CDS	ACA1_171630	NW_004457702.1	127914	131714	R	encoded by transcript ACA1_171630A; TFIIE alpha subunit	complement(join(127914..128052,128154..128233,128353..128484,128577..128982,129086..129176,129258..129347,129446..129532,129606..129708,129786..129849,129930..130009,130080..130173,130266..130403,130491..130612,130682..131008,131089..131232,131302..131447,131549..131714))	Acanthamoeba castellanii str. Neff	14925600
ACA1_171640	CDS	ACA1_171640	NW_004457702.1	132098	133010	R	encoded by transcript ACA1_171640A; uncharacterized protein	complement(join(132098..132127,132296..132367,132653..132868,132942..133010))	Acanthamoeba castellanii str. Neff	14925601
ACA1_171650	CDS	ACA1_171650	NW_004457702.1	133635	135246	D	encoded by transcript ACA1_171650A; exosome component 7, putative	join(133635..133857,134066..134190,134285..134355,134427..134535,134840..134924,134990..135060,135139..135246)	Acanthamoeba castellanii str. Neff	14925602
ACA1_171660	CDS	ACA1_171660	NW_004457702.1	135668	138107	D	encoded by transcript ACA1_171660A; protein phosphatase 2A regulatory B subunit	join(135668..135856,136082..136156,136247..136328,136438..136520,136652..136808,136890..136996,137087..137144,137222..137372,137640..137750,137849..138107)	Acanthamoeba castellanii str. Neff	14925603
ACA1_171670	CDS	ACA1_171670	NW_004457702.1	138750	140889	D	encoded by transcript ACA1_171670A; oxidoreductase, FADbinding family protein	join(138750..138787,138845..139117,139202..139532,139628..139744,139819..139944,140038..140093,140165..140266,140354..140484,140556..140680,140761..140889)	Acanthamoeba castellanii str. Neff	14925604
ACA1_171680	CDS	ACA1_171680	NW_004457702.1	141142	144122	R	encoded by transcript ACA1_171680A; PX domain containing protein	complement(join(141142..141195,141320..141472,141581..141643,141753..142036,142148..142253,142385..142486,142587..142714,142823..142961,143041..143142,143288..143440,143569..143652,143976..144122))	Acanthamoeba castellanii str. Neff	14925605
ACA1_171690	CDS	ACA1_171690	NW_004457702.1	144279	145107	D	encoded by transcript ACA1_171690A; uncharacterized protein	join(144279..144351,144450..144552,144638..144691,144806..144858,144989..145107)	Acanthamoeba castellanii str. Neff	14925606
ACA1_171700	CDS	ACA1_171700	NW_004457702.1	145445	145735	D	encoded by transcript ACA1_171700A; uncharacterized protein	join(<145445..145503,145564..145735)	Acanthamoeba castellanii str. Neff	14925607
ACA1_171710	CDS	ACA1_171710	NW_004457702.1	145786	149532	D	encoded by transcript ACA1_171710A; ligase I, DNA, ATPdependent, putative	join(145786..146096,146190..146276,146347..146500,146570..146730,146801..146882,146958..147017,147085..147196,147266..147381,147455..147544,147646..147918,147997..148068,148145..148255,148358..148474,148553..148609,148724..148819,148888..149007,149094..149171,149273..149365,149461..149532)	Acanthamoeba castellanii str. Neff	14925608
ACA1_171720	CDS	ACA1_171720	NW_004457702.1	149814	150871	R	encoded by transcript ACA1_171720A; uncharacterized protein	complement(join(149814..150162,150270..150402,150482..150599,150675..150745,150823..150871))	Acanthamoeba castellanii str. Neff	14925609
ACA1_171730	CDS	ACA1_171730	NW_004457702.1	152069	153237	D	encoded by transcript ACA1_171730A; uncharacterized protein	join(152069..152220,152390..152544,152635..152769,152871..153120,153225..153237)	Acanthamoeba castellanii str. Neff	14925610
ACA1_171740	CDS	ACA1_171740	NW_004457702.1	153609	155387	R	encoded by transcript ACA1_171740A; ATPase, AAA family domain containing protein	complement(join(153609..153721,153795..154001,154059..154274,154335..154422,154486..154622,154678..154799,154861..155008,155075..155387))	Acanthamoeba castellanii str. Neff	14925611
ACA1_171750	CDS	ACA1_171750	NW_004457702.1	155510	156800	D	encoded by transcript ACA1_171750A; uncharacterized protein	join(155510..155544,155625..156080,156149..156224,156306..156800)	Acanthamoeba castellanii str. Neff	14925612
ACA1_171760	CDS	ACA1_171760	NW_004457702.1	156874	158891	D	encoded by transcript ACA1_171760A; NAD binding oxidoreductase	join(156874..156948,157062..157167,157244..157296,157402..157534,157556..157563,157605..157737,157801..157832,157914..157977,158045..158100,158209..158457,158501..158569,158784..158891)	Acanthamoeba castellanii str. Neff	14925613
ACA1_171770	CDS	ACA1_171770	NW_004457702.1	158960	160659	R	encoded by transcript ACA1_171770A; oxidoreductase	complement(join(158960..159069,159206..159349,159419..159562,159663..159763,159847..159910,159988..160078,160166..160222,160315..160659))	Acanthamoeba castellanii str. Neff	14925614
ACA1_171780	CDS	ACA1_171780	NW_004457702.1	160763	162684	R	encoded by transcript ACA1_171780A; Peroxin 2 (Pex2), putative	complement(join(160763..160768,160884..161023,161109..161155,161237..161346,161512..161629,161720..161866,161940..162024,162117..162202,162281..162342,162412..162532,162602..162684))	Acanthamoeba castellanii str. Neff	14925615
ACA1_171790	CDS	ACA1_171790	NW_004457702.1	162910	163661	D	encoded by transcript ACA1_171790A; AIG2 family protein	join(162910..163209,163281..163661)	Acanthamoeba castellanii str. Neff	14925616
ACA1_171800	CDS	ACA1_171800	NW_004457702.1	164266	165970	D	encoded by transcript ACA1_171800A; uncharacterized protein	join(164266..164355,164432..164639,164704..165304,165385..165970)	Acanthamoeba castellanii str. Neff	14925617
ACA1_171810	CDS	ACA1_171810	NW_004457702.1	166241	167077	D	encoded by transcript ACA1_171810A; zinc finger, C3HC4 type (RING finger) domain containing protein	join(166241..166393,166467..166565,166637..166761,166846..166956,167008..167077)	Acanthamoeba castellanii str. Neff	14925618
ACA1_171820	CDS	ACA1_171820	NW_004457702.1	167387	169832	D	encoded by transcript ACA1_171820A; uncharacterized protein	join(167387..167936,168060..168149,168242..168303,168390..168464,168554..168661,168739..168876,168958..169008,169172..169330,169369..169494,169598..169687,169764..169832)	Acanthamoeba castellanii str. Neff	14925619
ACA1_171830	CDS	ACA1_171830	NW_004457702.1	170579	173433	D	encoded by transcript ACA1_171830A; FAD binding domain containing protein	join(170579..170668,170771..170850,170947..171246,171319..171440,171512..171672,171750..171896,171986..172085,172172..172315,172413..172508,172573..172708,172783..172843,172908..173013,173083..173222,173302..173433)	Acanthamoeba castellanii str. Neff	14925620
ACA1_171840	CDS	ACA1_171840	NW_004457702.1	173649	177017	D	encoded by transcript ACA1_171840A; RasGEF domain containing protein	join(173649..173727,173802..173929,174023..174042,174174..174224,174300..174356,174428..174565,174690..174951,175044..175167,175238..175295,175370..175499,175597..175764,175831..175909,175979..176097,176189..176355,176435..176554,176633..176765,176871..177017)	Acanthamoeba castellanii str. Neff	14925621
ACA1_171850	CDS	ACA1_171850	NW_004457702.1	177129	178164	D	encoded by transcript ACA1_171850A; uncharacterized protein	join(177129..177529,177610..177737,177833..178164)	Acanthamoeba castellanii str. Neff	14925622
ACA1_171860	CDS	ACA1_171860	NW_004457702.1	178537	181729	D	encoded by transcript ACA1_171860A; POT family protein	join(178537..178560,178687..178805,178928..179013,179351..179482,179601..179773,179862..179945,180017..180064,180162..180289,180421..180478,180570..180650,180803..180856,180955..181074,181211..181729)	Acanthamoeba castellanii str. Neff	14925623
ACA1_171870	CDS	ACA1_171870	NW_004457702.1	181844	183444	R	encoded by transcript ACA1_171870A; leucine rich repeat domain containing protein	complement(join(181844..182200,182270..182475,182556..182777,183057..183444))	Acanthamoeba castellanii str. Neff	14925624
ACA1_171880	CDS	ACA1_171880	NW_004457702.1	183767	186205	R	encoded by transcript ACA1_171880A; Fbox domain containing protein	complement(join(183767..183873,183963..184041,184123..184242,184382..185918,186081..186205))	Acanthamoeba castellanii str. Neff	14925625
ACA1_171890	CDS	ACA1_171890	NW_004457702.1	186486	193277	D	encoded by transcript ACA1_171890A; Beige/BEACH domain containing protein	join(186486..186608,186729..186795,186839..186996,187087..187272,187359..187517,187594..187683,187760..188106,188174..188300,188371..188484,188579..188785,188905..188972,189254..189432,189525..189841,189926..190021,190107..190231,190308..190551,190641..190769,190859..190949,191017..191233,191325..191539,191687..191861,191937..192131,192240..192336,192419..192638,192739..192911,193197..193277)	Acanthamoeba castellanii str. Neff	14925626
ACA1_171900	CDS	ACA1_171900	NW_004457702.1	194008	196857	D	encoded by transcript ACA1_171900A; ATPase/histidine kinase/DNA gyrase B/HSP90 domain containing protein	join(194008..194242,194329..194484,194596..194697,194780..194923,195015..195084,195282..195450,195544..195933,196021..196254,196357..196857)	Acanthamoeba castellanii str. Neff	14925627
ACA1_171910	CDS	ACA1_171910	NW_004457702.1	197026	199243	R	encoded by transcript ACA1_171910A; UDPN-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase isoform 6, putative	complement(join(197026..197207,197308..197432,197543..197613,197734..197927,198032..198107,198232..198317,198389..198491,198610..198720,198795..198906,199035..199243))	Acanthamoeba castellanii str. Neff	14925628
ACA1_171920	CDS	ACA1_171920	NW_004457702.1	199795	202458	D	encoded by transcript ACA1_171920A; uncharacterized protein	join(199795..200085,200222..200334,200402..200522,200656..200730,200844..200943,201095..201166,201252..201493,201562..201899,201999..202222,202298..202458)	Acanthamoeba castellanii str. Neff	14925629
ACA1_171930	CDS	ACA1_171930	NW_004457702.1	202584	204531	R	encoded by transcript ACA1_171930A; uncharacterized protein	complement(join(202584..202886,202980..203290,203387..203512,203580..203687,203824..203973,204089..204182,204280..204359,204447..204531))	Acanthamoeba castellanii str. Neff	14925630
ACA1_171940	CDS	ACA1_171940	NW_004457702.1	204599	206164	R	encoded by transcript ACA1_171940A; uncharacterized protein	complement(join(204599..204878,204962..205125,205170..205428,205506..205726,205792..205872,206111..206164))	Acanthamoeba castellanii str. Neff	14925631
ACA1_171950	CDS	ACA1_171950	NW_004457702.1	207379	208016	D	encoded by transcript ACA1_171950A; uncharacterized protein	join(207379..207495,207559..207632,207686..207816,207892..208016)	Acanthamoeba castellanii str. Neff	14925632
ACA1_171960	CDS	ACA1_171960	NW_004457702.1	208088	211254	R	encoded by transcript ACA1_171960A; uncharacterized protein	complement(join(208088..208318,208385..208480,208556..208651,208746..209021,209111..209246,209327..209672,209739..209826,209903..210000,210056..210162,210282..210419,210621..210738,210847..211011,211116..211254))	Acanthamoeba castellanii str. Neff	14925633
ACA1_171970	CDS	ACA1_171970	NW_004457702.1	211439	212549	D	encoded by transcript ACA1_171970A; uncharacterized protein	join(211439..211462,211524..211697,211755..212549)	Acanthamoeba castellanii str. Neff	14925634
ACA1_171980	CDS	ACA1_171980	NW_004457702.1	212605	214053	R	encoded by transcript ACA1_171980A; Ras subfamily protein	complement(join(212605..212769,212809..213092,213167..213253,213316..213427,213523..213658,213741..213805,213925..214053))	Acanthamoeba castellanii str. Neff	14925635
ACA1_172000	CDS	ACA1_172000	NW_004457702.1	221795	226120	R	encoded by transcript ACA1_172000A; Penicillin amidase	complement(join(221795..222104,222193..222331,222426..222826,222953..223364,223490..223553,223666..223800,223928..224017,224109..224243,224374..224467,224617..225293,225522..225679,225834..225976,226077..226120))	Acanthamoeba castellanii str. Neff	14925637
ACA1_172010	CDS	ACA1_172010	NW_004457702.1	226516	228357	D	encoded by transcript ACA1_172010A; uncharacterized protein	join(226516..226742,226907..227252,227331..227693,227800..227884,227994..228101,228221..228357)	Acanthamoeba castellanii str. Neff	14925638
ACA1_172020	CDS	ACA1_172020	NW_004457702.1	228663	229116	D	encoded by transcript ACA1_172020A; uncharacterized protein	join(228663..228894,228983..229116)	Acanthamoeba castellanii str. Neff	14925639
ACA1_172030	CDS	ACA1_172030	NW_004457702.1	229721	230140	D	encoded by transcript ACA1_172030A; uncharacterized protein	229721..230140	Acanthamoeba castellanii str. Neff	14925640
ACA1_172040	CDS	ACA1_172040	NW_004457702.1	230693	231087	D	encoded by transcript ACA1_172040A; uncharacterized protein	join(230693..230855,230942..231087)	Acanthamoeba castellanii str. Neff	14925641
ACA1_172050	CDS	ACA1_172050	NW_004457702.1	231192	232369	R	encoded by transcript ACA1_172050A; uncharacterized protein	complement(join(231192..231348,231424..231562,231655..231827,232076..232236,232298..232369))	Acanthamoeba castellanii str. Neff	14925642
ACA1_172060	CDS	ACA1_172060	NW_004457702.1	232466	234338	R	encoded by transcript ACA1_172060A; RNA recognition motif domain containing protein	complement(join(232466..232669,232746..232883,232988..233106,233172..233271,233363..233473,233537..233931,234073..234221,234319..234338))	Acanthamoeba castellanii str. Neff	14925643
ACA1_172070	CDS	ACA1_172070	NW_004457702.1	234492	241622	D	encoded by transcript ACA1_172070A; RIC1 protein	join(234492..234632,234757..234864,234950..235049,235165..235229,235326..235423,235549..235757,235804..235920,236002..236056,236148..236239,236325..236448,236511..236637,236760..236858,236958..236996,237079..237189,237253..237339,237507..237571,237670..237832,237912..238004,238150..238278,238377..238478,238612..239280,239381..239733,239748..239829,239911..240037,240218..240880,240994..241097,241200..241351,241481..241622)	Acanthamoeba castellanii str. Neff	14925644
ACA1_172080	CDS	ACA1_172080	NW_004457702.1	241686	242991	R	encoded by transcript ACA1_172080A; GRAM domain containing protein	complement(join(241686..241898,242034..242125,242232..242280,242364..242495,242581..242696,242820..242991))	Acanthamoeba castellanii str. Neff	14925645
ACA1_172090	CDS	ACA1_172090	NW_004457702.1	243182	244905	R	encoded by transcript ACA1_172090A; glycerophosphodiester phosphodiesterase	complement(join(243182..243290,243387..243464,243575..243649,243779..243982,244060..244204,244307..244412,244528..244590,244657..244759,244865..244905))	Acanthamoeba castellanii str. Neff	14925646
ACA1_172100	CDS	ACA1_172100	NW_004457702.1	245721	248890	D	encoded by transcript ACA1_172100A; Phosphatidylinositol4-phosphate 5-Kinase	join(245721..246146,246263..246424,246514..246667,246839..246891,246980..247071,247147..247283,247379..247451,247534..247629,247718..248078,248192..248890)	Acanthamoeba castellanii str. Neff	14925647
ACA1_172110	CDS	ACA1_172110	NW_004457702.1	249274	250203	D	encoded by transcript ACA1_172110A; rieske [2fe2s] domain containing protein	join(249274..249718,249789..249981,250071..250203)	Acanthamoeba castellanii str. Neff	14925648
ACA1_172120	CDS	ACA1_172120	NW_004457702.1	250777	251409	D	encoded by transcript ACA1_172120A; uncharacterized protein	join(250777..250825,250932..251171,251243..251409)	Acanthamoeba castellanii str. Neff	14925649
ACA1_172130	CDS	ACA1_172130	NW_004457702.1	251587	254107	R	encoded by transcript ACA1_172130A; diacylglycerol kinase accessory domain (presumed) domain containing protein	complement(join(251587..251667,251770..251893,251988..252085,252204..252388,252536..252619,252711..252877,253043..253117,253188..253318,253457..253574,253696..253763,253871..253981,254069..254107))	Acanthamoeba castellanii str. Neff	14925650
ACA1_172140	CDS	ACA1_172140	NW_004457702.1	254333	255539	D	encoded by transcript ACA1_172140A; uncharacterized protein	join(254333..254386,254464..254573,254659..254719,254807..254872,254947..255033,255151..255229,255352..255539)	Acanthamoeba castellanii str. Neff	14925651
ACA1_172150	CDS	ACA1_172150	NW_004457702.1	255860	257559	D	encoded by transcript ACA1_172150A; outer membrane autotransporter, putative	join(255860..256059,256134..256249,256332..256431,256557..257238,257311..257559)	Acanthamoeba castellanii str. Neff	14925652
ACA1_172160	CDS	ACA1_172160	NW_004457702.1	257653	259498	R	encoded by transcript ACA1_172160A; uncharacterized protein	complement(join(257653..257841,257958..258091,258347..258431,258519..258887,259012..259116,259230..259321,259393..259498))	Acanthamoeba castellanii str. Neff	14925653
ACA1_172170	CDS	ACA1_172170	NW_004457702.1	259595	262195	R	encoded by transcript ACA1_172170A; WD domain, Gbeta repeat/F-box domain containing protein	complement(join(259595..259682,259793..260046,260121..260301,260401..260537,260644..260755,260860..260978,261091..261329,261476..261587,261672..261758,261872..261949,262082..262195))	Acanthamoeba castellanii str. Neff	14925654
ACA1_172180	CDS	ACA1_172180	NW_004457702.1	262497	269282	R	encoded by transcript ACA1_172180A; RhoGAP domain containing protein	complement(join(262497..262569,262710..262757,262861..262929,263010..263163,263231..263318,263427..263665,263795..264071,264156..264255,264364..264496,264592..264839,264932..267033,267113..267660,267745..267813,267898..268015,268088..268130,268214..268386,268473..268590,268697..268751,268903..269005,269091..269146,269213..269282))	Acanthamoeba castellanii str. Neff	14925655
ACA1_172190	CDS	ACA1_172190	NW_004457702.1	269822	273948	D	encoded by transcript ACA1_172190A; formin domain containing protein	join(269822..270026,270151..270206,270298..270483,270598..270694,270773..270999,271084..271644,271732..271930,272018..272223,272295..272534,272653..272835,272908..273018,273119..273217,273304..273948)	Acanthamoeba castellanii str. Neff	14925656
ACA1_172200	CDS	ACA1_172200	NW_004457702.1	274727	274957	R	encoded by transcript ACA1_172200A; uncharacterized protein	complement(274727..274957)	Acanthamoeba castellanii str. Neff	14925657
ACA1_172210	CDS	ACA1_172210	NW_004457702.1	275786	278562	R	encoded by transcript ACA1_172210A; uncharacterized protein	complement(join(275786..276028,276183..276289,276389..276494,276603..276798,276897..276991,277089..277319,277434..277553,277693..277770,277882..277939,278017..278192,278260..278387,278487..278562))	Acanthamoeba castellanii str. Neff	14925658
ACA1_172220	CDS	ACA1_172220	NW_004457702.1	278732	279559	R	encoded by transcript ACA1_172220A; uncharacterized protein	complement(join(278732..278784,278872..278967,279043..279340,279425..279559))	Acanthamoeba castellanii str. Neff	14925659
ACA1_172230	CDS	ACA1_172230	NW_004457702.1	279684	281140	D	encoded by transcript ACA1_172230A; serine/threonineprotein phosphatase 2a activator 1, putative	join(279684..279902,279989..280114,280213..280444,280504..280614,280790..280890,280970..281140)	Acanthamoeba castellanii str. Neff	14925660
ACA1_172240	CDS	ACA1_172240	NW_004457702.1	281448	283138	D	encoded by transcript ACA1_172240A; uncharacterized protein	join(281448..281595,281691..282173,282399..283138)	Acanthamoeba castellanii str. Neff	14925661
ACA1_172250	CDS	ACA1_172250	NW_004457702.1	283204	287289	R	encoded by transcript ACA1_172250A; leucine rich repeat domain containing protein	complement(join(283204..283363,283458..283940,284075..284957,285045..285188,285276..285441,285545..285672,285803..285905,285973..286136,286220..286322,286432..286604,286671..287018,287145..287289))	Acanthamoeba castellanii str. Neff	14925662
ACA1_172260	CDS	ACA1_172260	NW_004457702.1	287438	288062	R	encoded by transcript ACA1_172260A; uncharacterized protein	complement(join(287438..287622,287750..288062))	Acanthamoeba castellanii str. Neff	14925663
ACA1_172370	CDS	ACA1_172370	NW_004457702.1	288479	288964	D	encoded by transcript ACA1_172370A; uncharacterized protein	join(288479..288565,288669..288701,288791..288964)	Acanthamoeba castellanii str. Neff	14925664
ACA1_172490	CDS	ACA1_172490	NW_004457702.1	293521	294152	R	encoded by transcript ACA1_172490A; uncharacterized protein	complement(join(293521..293717,293826..293898,294102..294152))	Acanthamoeba castellanii str. Neff	14925666
ACA1_172600	CDS	ACA1_172600	NW_004457702.1	294693	295322	D	encoded by transcript ACA1_172600A; uncharacterized protein	<294693..>295322	Acanthamoeba castellanii str. Neff	14925667
ACA1_172710	CDS	ACA1_172710	NW_004457702.1	295415	301088	R	encoded by transcript ACA1_172710A; uncharacterized protein	complement(join(<295415..295469,295543..295642,295755..295815,295923..296043,296143..296609,296706..296807,296914..296966,297060..297129,297215..297290,297375..297550,297629..297726,297809..297929,298254..298315,298393..298538,298627..298733,298838..298941,299042..299174,299264..299317,299397..299484,299562..299695,299787..299903,299939..300149,300219..300327,300416..300477,300607..301088))	Acanthamoeba castellanii str. Neff	14925668
ACA1_172720	CDS	ACA1_172720	NW_004457702.1	301317	304594	D	encoded by transcript ACA1_172720A; pentatricopeptide repeat domain containing protein	join(301317..301382,301730..301841,301908..301995,302080..302206,302305..302370,302462..302515,302578..302663,302738..302852,302935..303144,303262..303372,303457..303555,303645..303765,303840..303913,304003..304059,304153..304424,304513..304594)	Acanthamoeba castellanii str. Neff	14925669
ACA1_172730	CDS	ACA1_172730	NW_004457702.1	304737	306383	R	encoded by transcript ACA1_172730A; PKD domain containing protein	complement(304737..306383)	Acanthamoeba castellanii str. Neff	14925670
ACA1_172740	CDS	ACA1_172740	NW_004457702.1	306700	308393	R	encoded by transcript ACA1_172740A; oxidoreductase, zincbinding dehydrogenase superfamily protein	complement(join(306700..306877,306957..307058,307141..307227,307294..307558,307654..307756,307767..307782,308056..308105,308178..308393))	Acanthamoeba castellanii str. Neff	14925671
ACA1_172750	CDS	ACA1_172750	NW_004457702.1	308965	311232	D	encoded by transcript ACA1_172750A; DEAD/DEAH box helicase domain containing protein	join(308965..309343,309497..309737,309815..310604,310689..310832,310936..311232)	Acanthamoeba castellanii str. Neff	14925672
ACA1_172760	CDS	ACA1_172760	NW_004457702.1	311730	313700	R	encoded by transcript ACA1_172760A; uncharacterized protein	complement(join(311730..311821,311903..312439,312553..312618,312749..313034,313107..313162,313283..313405,313472..313700))	Acanthamoeba castellanii str. Neff	14925673
ACA1_172770	CDS	ACA1_172770	NW_004457702.1	314260	319393	D	encoded by transcript ACA1_172770A; domain found in dishevelled, egl10, and pleckstrin domain containing protein	join(314260..314338,314443..314545,314646..314769,314853..315155,315264..315465,315531..315776,315860..315941,316012..316076,316143..316224,316314..316382,316475..316545,316630..316699,316977..317143,317273..317312,317384..317504,317654..317953,318053..318183,318221..318383,318474..318631,318844..319393)	Acanthamoeba castellanii str. Neff	14925674
ACA1_172780	CDS	ACA1_172780	NW_004457702.1	319590	322002	D	encoded by transcript ACA1_172780A; uncharacterized protein	join(319590..319697,319787..320170,320262..320419,320552..321012,321085..321188,321234..321460,321585..322002)	Acanthamoeba castellanii str. Neff	14925675
ACA1_172790	CDS	ACA1_172790	NW_004457702.1	322039	324551	R	encoded by transcript ACA1_172790A; uncharacterized protein	complement(join(322039..323022,323044..323453,323527..324064,324228..324551))	Acanthamoeba castellanii str. Neff	14925676
ACA1_172800	CDS	ACA1_172800	NW_004457702.1	325123	328438	R	encoded by transcript ACA1_172800A; uncharacterized protein	complement(join(325123..326668,326736..327809,328029..328438))	Acanthamoeba castellanii str. Neff	14925677
ACA1_172810	CDS	ACA1_172810	NW_004457702.1	329241	331157	R	encoded by transcript ACA1_172810A; BTB/POZ domain containing protein	complement(join(329241..329251,329349..329538,329648..329808,329912..330018,330101..330228,330331..330396,330473..330570,330590..330948,331056..331086,331100..331157))	Acanthamoeba castellanii str. Neff	14925678
ACA1_172830	CDS	ACA1_172830	NW_004457702.1	332166	333806	R	encoded by transcript ACA1_172830A; WD domain, Gbeta repeat-containing protein	complement(join(332166..332238,332331..332411,332490..332736,332825..332983,333057..333149,333242..333324,333422..333495,333565..333621,333684..333806))	Acanthamoeba castellanii str. Neff	14925680
ACA1_172840	CDS	ACA1_172840	NW_004457702.1	334034	335038	D	encoded by transcript ACA1_172840A; NmrAlike family protein	join(334034..334398,334480..335038)	Acanthamoeba castellanii str. Neff	14925681
ACA1_172850	CDS	ACA1_172850	NW_004457702.1	335098	340406	R	encoded by transcript ACA1_172850A; DNA mismatch repair protein msh2, putative	complement(join(335098..335255,335362..335530,335618..335733,335827..335945,336063..336154,336224..336404,336529..336577,336658..336730,336814..336892,336980..337043,337129..337211,337297..337388,337509..337595,337702..337872,337963..338079,338281..338406,338544..338626,338709..338769,338833..338892,338958..339016,339095..339169,339206..339550,339621..339905,340028..340138,340376..340406))	Acanthamoeba castellanii str. Neff	14925682
ACA1_172860	CDS	ACA1_172860	NW_004457702.1	340875	342337	D	encoded by transcript ACA1_172860A; 20beta-hydroxysteroid dehydrogenase	join(340875..340979,341083..341306,341404..341477,341567..341661,341740..341860,341932..341986,342058..342134,342237..342337)	Acanthamoeba castellanii str. Neff	14925683
ACA1_172870	CDS	ACA1_172870	NW_004457702.1	342412	343690	R	encoded by transcript ACA1_172870A; nadph-dependent carbonyl reductase family protein	complement(join(342412..342589,342650..342807,342905..342999,343114..343257,343341..343494,343577..343690))	Acanthamoeba castellanii str. Neff	14925684
ACA1_172880	CDS	ACA1_172880	NW_004457702.1	344576	349930	D	encoded by transcript ACA1_172880A; kelch repeat-containing protein	join(344576..344702,344820..344969,345065..345141,345218..345266,345419..345572,345709..345771,345878..345975,346061..346141,346214..347024,347099..347208,347311..347440,347645..347729,347851..347992,348067..348146,348218..348268,348425..348621,348745..349930)	Acanthamoeba castellanii str. Neff	14925685
ACA1_172890	CDS	ACA1_172890	NW_004457702.1	350281	350630	D	encoded by transcript ACA1_172890A; uncharacterized protein	join(350281..350372,350440..350488,350523..350630)	Acanthamoeba castellanii str. Neff	14925686
ACA1_172900	CDS	ACA1_172900	NW_004457702.1	350822	353375	R	encoded by transcript ACA1_172900A; protein phosphatase 2C domain containing protein	complement(join(350822..351055,351146..351604,351694..351851,351944..352040,352148..352250,352357..352495,352598..352745,352884..353375))	Acanthamoeba castellanii str. Neff	14925687
ACA1_172910	CDS	ACA1_172910	NW_004457702.1	353610	359009	R	encoded by transcript ACA1_172910A; chloride transporter, chloride channel (ClC) subfamily protein	complement(join(353610..353873,353945..354169,354299..354342,354458..354580,354677..354772,354872..354932,355041..355120,355209..355287,355378..355515,355592..355674,355754..355871,355925..355992,356087..356213,356339..356401,356463..356526,356603..356670,356737..356834,356976..357063,357140..357286,357396..357487,357549..357644,357775..357856,357922..357987,358362..358478,358669..358743,358805..358846,358929..359009))	Acanthamoeba castellanii str. Neff	14925688
ACA1_172920	CDS	ACA1_172920	NW_004457702.1	359135	365286	D	encoded by transcript ACA1_172920A; uncharacterized protein	join(359135..359210,359384..359473,359565..359640,359723..359790,359860..359942,360444..360537,360624..360754,360878..360953,361042..361139,361245..361384,361467..361574,361652..361751,361842..361925,362021..362110,362216..362323,362414..362530,362660..363515,363644..363738,363817..363905,363980..364052,364143..364244,364318..364449,364543..365286)	Acanthamoeba castellanii str. Neff	14925689
ACA1_172930	CDS	ACA1_172930	NW_004457702.1	365399	365758	R	encoded by transcript ACA1_172930A; uncharacterized protein	complement(join(365399..365473,365564..365758))	Acanthamoeba castellanii str. Neff	14925690
ACA1_172940	CDS	ACA1_172940	NW_004457702.1	366721	370687	D	encoded by transcript ACA1_172940A; protein kinase domain containing protein	join(366721..366868,367026..367072,367170..367251,367333..367452,367566..367779,367863..367963,368046..368210,368314..368620,368751..368975,369076..369190,369273..369381,369619..369734,369869..370128,370212..370317,370481..370687)	Acanthamoeba castellanii str. Neff	14925691
ACA1_172950	CDS	ACA1_172950	NW_004457702.1	370889	371266	R	encoded by transcript ACA1_172950A; prosaposin, putative	complement(370889..371266)	Acanthamoeba castellanii str. Neff	14925692
ACA1_172960	CDS	ACA1_172960	NW_004457702.1	371457	373106	D	encoded by transcript ACA1_172960A; GDPfucose transporter 1, putative	join(371457..371542,371628..371765,371873..372023,372240..372406,372471..372535,372604..372730,372814..372884,372976..373106)	Acanthamoeba castellanii str. Neff	14925693
ACA1_172970	CDS	ACA1_172970	NW_004457702.1	373192	377769	R	encoded by transcript ACA1_172970A; chloride transporter, chloride channel (ClC) subfamily protein	complement(join(373192..373424,373650..373712,373794..373844,373904..373999,374076..374220,374321..374437,374512..374592,374725..374795,374890..374958,375052..375086,375164..375274,375368..375439,375555..375607,375703..375771,375828..375882,375984..376143,376217..376300,376385..376444,376538..376600,376714..376770,376900..377043,377149..377231,377362..377426,377533..377636,377715..377769))	Acanthamoeba castellanii str. Neff	14925694
ACA1_172980	CDS	ACA1_172980	NW_004457702.1	379153	380251	D	encoded by transcript ACA1_172980A; uncharacterized protein	join(379153..379437,379507..379700,379774..379923,379993..380091,380161..380251)	Acanthamoeba castellanii str. Neff	14925695
ACA1_172990	CDS	ACA1_172990	NW_004457702.1	380709	381107	D	encoded by transcript ACA1_172990A; uncharacterized protein	380709..381107	Acanthamoeba castellanii str. Neff	14925696
ACA1_173000	CDS	ACA1_173000	NW_004457702.1	382064	382903	R	encoded by transcript ACA1_173000A; uncharacterized protein	complement(join(382064..382420,382433..382511,382587..382636,382649..382903))	Acanthamoeba castellanii str. Neff	14925697
ACA1_173010	CDS	ACA1_173010	NW_004457702.1	384278	386300	R	encoded by transcript ACA1_173010A; Vtype ATPase, A subunit	complement(join(384278..386169,386234..386300))	Acanthamoeba castellanii str. Neff	14925698
ACA1_173020	CDS	ACA1_173020	NW_004457702.1	386656	387441	R	encoded by transcript ACA1_173020A; NADPHdependent FMN reductase domain containing protein	complement(386656..387441)	Acanthamoeba castellanii str. Neff	14925699
ACA1_173030	CDS	ACA1_173030	NW_004457702.1	388171	391155	D	encoded by transcript ACA1_173030A; uncharacterized protein	388171..391155	Acanthamoeba castellanii str. Neff	14925700
ACA1_173040	CDS	ACA1_173040	NW_004457702.1	391221	392139	R	encoded by transcript ACA1_173040A; uncharacterized protein	complement(join(391221..391550,391663..392139))	Acanthamoeba castellanii str. Neff	14925701
ACA1_173050	CDS	ACA1_173050	NW_004457702.1	392336	392810	R	encoded by transcript ACA1_173050A; uncharacterized protein	complement(join(392336..392502,392612..392624,392655..392810))	Acanthamoeba castellanii str. Neff	14925702
ACA1_173060	CDS	ACA1_173060	NW_004457702.1	393058	395110	R	encoded by transcript ACA1_173060A; SNARE associated Golgi protein	complement(join(393058..393395,393485..393584,393692..393863,393950..394025,394101..394159,394235..394300,394379..394438,394537..394602,394684..394921,395047..395110))	Acanthamoeba castellanii str. Neff	14925703
ACA1_173070	CDS	ACA1_173070	NW_004457702.1	395258	396863	D	encoded by transcript ACA1_173070A; CDPalcohol phosphatidyltransferase superfamily protein	join(395258..395611,395668..395716,395798..395900,395940..396025,396119..396187,396269..396302,396333..396377,396454..396490,396595..396689,396755..396863)	Acanthamoeba castellanii str. Neff	14925704
ACA1_173080	CDS	ACA1_173080	NW_004457702.1	396982	397364	D	encoded by transcript ACA1_173080A; uncharacterized protein	join(396982..397155,397272..397364)	Acanthamoeba castellanii str. Neff	14925705
ACA1_173090	CDS	ACA1_173090	NW_004457702.1	397393	400571	D	encoded by transcript ACA1_173090A; Arginine-tRNA-protein transferase, putative	join(397393..397543,397672..397767,397861..397939,398073..399021,399093..399145,399246..399370,399482..399557,399638..399713,399793..399853,399947..399984,400057..400136,400222..400339,400461..400571)	Acanthamoeba castellanii str. Neff	14925706
ACA1_173100	CDS	ACA1_173100	NW_004457702.1	402392	404626	R	encoded by transcript ACA1_173100A; gelation factor, putative	complement(402392..404626)	Acanthamoeba castellanii str. Neff	14925707
ACA1_173120	CDS	ACA1_173120	NW_004457702.1	407481	408482	R	encoded by transcript ACA1_173120A; leucine rich repeat domain containing protein	complement(join(407481..408251,408429..408482))	Acanthamoeba castellanii str. Neff	14925709
ACA1_173130	CDS	ACA1_173130	NW_004457702.1	408650	409383	R	encoded by transcript ACA1_173130A; uncharacterized protein	complement(join(408650..408761,408848..408927,409050..409182,409274..409383))	Acanthamoeba castellanii str. Neff	14925710
ACA1_173140	CDS	ACA1_173140	NW_004457702.1	409559	411043	D	encoded by transcript ACA1_173140A; silent information regulator protein Sir2, putative	join(409559..409604,409691..409790,409868..409986,410077..410239,410322..410426,410499..410554,410648..410776,410841..411043)	Acanthamoeba castellanii str. Neff	14925711
ACA1_173150	CDS	ACA1_173150	NW_004457702.1	411338	413447	D	encoded by transcript ACA1_173150A; uncharacterized protein	join(411338..411669,411706..411808,411904..411964,412046..412216,412294..413447)	Acanthamoeba castellanii str. Neff	14925712
ACA1_173160	CDS	ACA1_173160	NW_004457702.1	413680	415604	D	encoded by transcript ACA1_173160A; uncharacterized protein	join(413680..414278,414404..414663,414795..414877,414976..415035,415130..415329,415418..415604)	Acanthamoeba castellanii str. Neff	14925713
ACA1_173170	CDS	ACA1_173170	NW_004457702.1	416206	424140	R	encoded by transcript ACA1_173170A; SNF2 family Nterminal domain containing protein	complement(join(416206..416679,416747..417044,417143..417327,417474..417524,417551..417781,417834..418037,418177..418269,418371..418588,418715..418861,418954..419089,419181..419339,419421..419506,419567..419684,419799..419940,420049..420117,420205..420272,420445..420540,420622..420750,420854..420927,421036..421189,421326..421408,421488..421563,421729..421871,421997..422063,422156..422257,422344..422407,422471..422562,422645..422733,422855..422995,423080..423149,423222..423340,423459..423643,423917..424005,424123..424140))	Acanthamoeba castellanii str. Neff	14925714
ACA1_173180	CDS	ACA1_173180	NW_004457702.1	424801	425958	R	encoded by transcript ACA1_173180A; EMG1 nucleolar protein, putative	complement(join(424801..424914,424987..425093,425202..425312,425392..425533,425601..425729,425878..425958))	Acanthamoeba castellanii str. Neff	14925715
ACA1_173190	CDS	ACA1_173190	NW_004457702.1	426959	428639	D	encoded by transcript ACA1_173190A; AT hook motif domain containing protein	join(426959..428492,428590..428639)	Acanthamoeba castellanii str. Neff	14925716
ACA1_173200	CDS	ACA1_173200	NW_004457702.1	430342	433353	D	encoded by transcript ACA1_173200A; uncharacterized protein	join(430342..430863,431369..431954,432034..432173,432321..432767,432862..432958,433034..433169,433254..433353)	Acanthamoeba castellanii str. Neff	14925717
ACA1_173210	CDS	ACA1_173210	NW_004457702.1	433589	434124	R	encoded by transcript ACA1_173210A; uncharacterized protein	complement(join(433589..433710,433818..433920,434107..434124))	Acanthamoeba castellanii str. Neff	14925718
ACA1_173220	CDS	ACA1_173220	NW_004457702.1	434330	435034	D	encoded by transcript ACA1_173220A; ankyrin 2,3/unc44, putative	434330..435034	Acanthamoeba castellanii str. Neff	14925719
ACA1_173230	CDS	ACA1_173230	NW_004457702.1	435133	438371	R	encoded by transcript ACA1_173230A; uncharacterized protein	complement(join(435133..435358,435446..435834,435854..435960,436050..436407,436506..436629,436737..436960,437095..437204,437338..437485,437647..437758,437948..438055,438137..438235,438334..438371))	Acanthamoeba castellanii str. Neff	14925720
ACA1_173240	CDS	ACA1_173240	NW_004457702.1	438484	444063	R	encoded by transcript ACA1_173240A; Poly(ADPribose) polymerase catalytic domain containing protein	complement(join(438484..438552,438641..438713,438826..438968,439068..439132,439205..439301,439417..439569,439661..439833,439930..440097,440192..440302,440398..440482,440553..440677,440783..440888,440979..441124,441228..441387,441487..441590,441774..441972,442046..442157,442281..442360,442453..442524,442652..443220,443334..443416,443499..443675,443775..443868,443946..444063))	Acanthamoeba castellanii str. Neff	14925721
ACA1_173250	CDS	ACA1_173250	NW_004457702.1	444676	445973	R	encoded by transcript ACA1_173250A; C2 domain containing protein	complement(join(444676..445236,445323..445531,445624..445697,445789..445840,445955..445973))	Acanthamoeba castellanii str. Neff	14925722
ACA1_173260	CDS	ACA1_173260	NW_004457702.1	446141	448430	R	encoded by transcript ACA1_173260A; Fbox domain/WD domain, G-beta repeat-containing protein	complement(join(446141..446346,446456..446694,446763..446896,447003..447175,447275..447373,447474..447584,447662..447857,447927..447994,448090..448150,448233..448430))	Acanthamoeba castellanii str. Neff	14925723
ACA1_173270	CDS	ACA1_173270	NW_004457702.1	448740	449600	D	encoded by transcript ACA1_173270A; glycine cleavage system H protein	join(448740..448869,448998..449149,449211..449294,449368..449490,449574..449600)	Acanthamoeba castellanii str. Neff	14925724
ACA1_173280	CDS	ACA1_173280	NW_004457702.1	449810	451137	R	encoded by transcript ACA1_173280A; uncharacterized protein	complement(join(449810..450075,450146..450349,450424..450798,450873..451137))	Acanthamoeba castellanii str. Neff	14925725
ACA1_173290	CDS	ACA1_173290	NW_004457702.1	451278	453124	R	encoded by transcript ACA1_173290A; UBX domain containing protein	complement(join(451278..451341,451472..452281,452394..452810,452844..453124))	Acanthamoeba castellanii str. Neff	14925726
ACA1_173300	CDS	ACA1_173300	NW_004457702.1	453404	454394	R	encoded by transcript ACA1_173300A; uncharacterized protein	complement(join(453404..453579,453652..453760,453887..454027,454115..454181,454240..454394))	Acanthamoeba castellanii str. Neff	14925727
ACA1_173310	CDS	ACA1_173310	NW_004457702.1	455089	461769	D	encoded by transcript ACA1_173310A; MIF4G domain containing protein	join(455089..455121,455191..455295,455387..455614,455629..456010,456116..456522,456596..456748,456819..456929,457008..457103,457207..457332,457484..457618,457714..457989,458088..458198,458292..458357,458450..458557,458638..458715,458852..458962,459055..459174,459279..459395,459562..459691,459791..460044,460159..460243,460371..460610,460692..460903,460994..461141,461274..461444,461687..461769)	Acanthamoeba castellanii str. Neff	14925728
ACA1_173320	CDS	ACA1_173320	NW_004457702.1	463113	463869	D	encoded by transcript ACA1_173320A; uncharacterized protein	join(463113..463170,463303..463362,463519..463632,463730..463869)	Acanthamoeba castellanii str. Neff	14925729
ACA1_173330	CDS	ACA1_173330	NW_004457702.1	464065	465397	D	encoded by transcript ACA1_173330A; Fbox domain containing protein	join(464065..464257,464342..464475,464541..464627,464727..464807,464941..465043,465137..465227,465295..465397)	Acanthamoeba castellanii str. Neff	14925730
ACA1_173340	CDS	ACA1_173340	NW_004457702.1	465921	467229	D	encoded by transcript ACA1_173340A; ChaC, cation transport regulatorlike 2, putative	join(<465921..465989,466079..466141,466247..466327,466427..466495,466594..466684,466973..467077,467171..467229)	Acanthamoeba castellanii str. Neff	14925731
ACA1_173350	CDS	ACA1_173350	NW_004457702.1	467419	469486	R	encoded by transcript ACA1_173350A; carrier superfamily protein	complement(join(467419..467553,467683..467739,467829..467882,467978..468063,468154..468253,468349..468430,468589..468760,468859..468908,469027..469117,469221..469319,469384..469486))	Acanthamoeba castellanii str. Neff	14925732
ACA1_173360	CDS	ACA1_173360	NW_004457702.1	469639	470681	D	encoded by transcript ACA1_173360A; translocase inner membrane protein	join(469639..469840,469953..470032,470116..470190,470275..470328,470448..470520,470608..470681)	Acanthamoeba castellanii str. Neff	14925733
ACA1_173370	CDS	ACA1_173370	NW_004457702.1	472162	474602	D	encoded by transcript ACA1_173370A; 'chromo' (CHRromatin Organization MOdifier) domain containing protein	join(472162..472250,472368..472672,472816..474602)	Acanthamoeba castellanii str. Neff	14925734
ACA1_173380	CDS	ACA1_173380	NW_004457702.1	474676	475055	R	encoded by transcript ACA1_173380A; uncharacterized protein	complement(join(474676..474818,474884..475055))	Acanthamoeba castellanii str. Neff	14925735
ACA1_173390	CDS	ACA1_173390	NW_004457702.1	475318	478465	D	encoded by transcript ACA1_173390A; leucine rich repeat domain containing protein	join(475318..475955,476043..476105,476228..476291,476557..477236,477375..477474,477602..477662,477737..477903,478000..478241,478348..478465)	Acanthamoeba castellanii str. Neff	14925736
ACA1_173400	CDS	ACA1_173400	NW_004457702.1	479273	481982	D	encoded by transcript ACA1_173400A; uncharacterized protein	join(479273..479283,479295..479392,479406..479776,479881..479913,480180..481469,481674..481982)	Acanthamoeba castellanii str. Neff	14925737
ACA1_173410	CDS	ACA1_173410	NW_004457702.1	482051	490996	R	encoded by transcript ACA1_173410A; RNA polymerase Rpb1 repeat containing protein	complement(join(482051..482962,482976..483225,484512..484881,484899..485007,485269..486728,486746..487275,487302..487810,487901..487945,488012..488317,488366..488578,488606..488910,488974..489592,489614..489761,489942..489997,490068..490223,490349..490996))	Acanthamoeba castellanii str. Neff	14925738
ACA1_173620	CDS	ACA1_173620	NW_004457702.1	491315	491709	R	encoded by transcript ACA1_173620A; uncharacterized protein	complement(join(491315..491531,491600..491709))	Acanthamoeba castellanii str. Neff	14925739
ACA1_173630	CDS	ACA1_173630	NW_004457702.1	492529	498964	D	encoded by transcript ACA1_173630A; RhoGEF domain containing protein	join(492529..492633,492729..492803,493088..493146,493263..493326,493425..493538,493655..493750,493843..493947,494244..494394,494710..494815,494981..495043,495122..495224,495364..495625,495689..496720,496821..497755,497842..497979,498088..498195,498316..498594,498737..498964)	Acanthamoeba castellanii str. Neff	14925740
ACA1_173640	CDS	ACA1_173640	NW_004457702.1	499508	501406	D	encoded by transcript ACA1_173640A; uncharacterized protein	join(<499508..499835,499934..500369,500446..500503,500597..500959,501052..501148,501225..501406)	Acanthamoeba castellanii str. Neff	14925741
ACA1_173650	CDS	ACA1_173650	NW_004457702.1	501851	506404	D	encoded by transcript ACA1_173650A; HEAT repeat domain containing protein	join(501851..502508,502640..502716,502790..502900,502923..502982,502999..503142,503234..503331,503432..503625,503787..503958,504039..504150,504249..504506,504613..504679,504794..504907,505020..505285,505430..505565,505647..506404)	Acanthamoeba castellanii str. Neff	14925742
ACA1_173660	CDS	ACA1_173660	NW_004457702.1	507507	509967	R	encoded by transcript ACA1_173660A; aspartic proteinase	complement(join(507507..507668,507787..507903,508048..508166,508258..508420,508541..508861,508957..509153,509296..509398,509530..509628,509779..>509967))	Acanthamoeba castellanii str. Neff	14925743
ACA1_173670	CDS	ACA1_173670	NW_004457702.1	510984	513143	D	encoded by transcript ACA1_173670A; uncharacterized protein	join(510984..511029,511227..511391,511491..511611,511735..511814,511958..512109,512177..512273,512371..512498,512584..512690,512828..512961,513091..513143)	Acanthamoeba castellanii str. Neff	14925744
ACA1_173680	CDS	ACA1_173680	NW_004457702.1	513357	519050	R	encoded by transcript ACA1_173680A; myosin IC heavy chain, putative	complement(join(513357..513478,513666..513769,513878..514109,514174..514419,514518..514778,514910..515125,515295..515440,515539..515719,515812..516145,516251..516349,516428..516518,516585..516655,516736..516906,517008..517157,517258..517394,517483..517618,517720..517823,517916..518000,518091..518168,518299..518476,518562..518681,518769..518836,518973..519050))	Acanthamoeba castellanii str. Neff	14925745
ACA1_173790	CDS	ACA1_173790	NW_004457702.1	519632	521044	D	encoded by transcript ACA1_173790A; nicotinate (nicotinamide) nucleotide adenylyltransferase	join(519632..519683,519782..519853,519993..520084,520173..520286,520367..520498,520598..520699,520798..520856,520945..521044)	Acanthamoeba castellanii str. Neff	14925746
ACA1_173800	CDS	ACA1_173800	NW_004457702.1	521314	522497	D	encoded by transcript ACA1_173800A; mitochondrial phosphate transporter, putative	join(521314..521331,521423..521983,522099..522497)	Acanthamoeba castellanii str. Neff	14925747
ACA1_173810	CDS	ACA1_173810	NW_004457702.1	522683	525001	D	encoded by transcript ACA1_173810A; carrier superfamily protein	join(522683..522815,522901..522952,523119..523227,523340..523388,523508..523603,523747..523952,524022..524152,524246..524394,524499..524533,524619..524718,524820..524896,524969..525001)	Acanthamoeba castellanii str. Neff	14925748
ACA1_173820	CDS	ACA1_173820	NW_004457702.1	525160	528763	R	encoded by transcript ACA1_173820A; protein kinase domain containing protein	complement(join(525160..525370,525470..526082,526198..526279,526411..526533,526611..526713,526806..526918,527015..527092,527213..527250,527365..527439,527553..527724,527809..527838,527964..528119,528224..528275,528400..528455,528574..528597,528722..528763))	Acanthamoeba castellanii str. Neff	14925749
ACA1_173830	CDS	ACA1_173830	NW_004457702.1	529129	530899	D	encoded by transcript ACA1_173830A; methylisocitrate lyase, putative	join(529129..529346,529443..529505,529606..529726,529802..530046,530121..530355,530465..530899)	Acanthamoeba castellanii str. Neff	14925750
ACA1_173840	CDS	ACA1_173840	NW_004457702.1	531527	531976	D	encoded by transcript ACA1_173840A; uncharacterized protein	531527..531976	Acanthamoeba castellanii str. Neff	14925751
ACA1_173850	CDS	ACA1_173850	NW_004457702.1	532107	533815	D	encoded by transcript ACA1_173850A; hydrolase, alpha/beta fold domain containing protein	join(532107..532223,532384..532537,532659..532739,532857..533815)	Acanthamoeba castellanii str. Neff	14925752
ACA1_173860	CDS	ACA1_173860	NW_004457702.1	534070	535186	R	encoded by transcript ACA1_173860A; Mob4B protein isoform 3, putative	complement(join(534070..534448,534595..534688,534791..534951,535167..535186))	Acanthamoeba castellanii str. Neff	14925753
ACA1_173870	CDS	ACA1_173870	NW_004457702.1	535520	539634	R	encoded by transcript ACA1_173870A; adaptin subfamily protein	complement(join(535520..535672,535769..535879,535969..536079,536176..536281,536364..536458,536585..536656,536735..537025,537139..537309,537390..537567,537644..537810,537914..538039,538183..538290,538422..538505,538637..538728,538837..539053,539213..539355,539490..539634))	Acanthamoeba castellanii str. Neff	14925754
ACA1_173880	CDS	ACA1_173880	NW_004457702.1	539766	540262	D	encoded by transcript ACA1_173880A; uncharacterized protein	join(539766..540111,540183..540262)	Acanthamoeba castellanii str. Neff	14925755
ACA1_173890	CDS	ACA1_173890	NW_004457702.1	540593	542582	R	encoded by transcript ACA1_173890A; ubiquitinspecific protease	complement(join(540593..540766,540876..541063,541133..541541,541650..541886,541988..542082,542250..542364,542478..542582))	Acanthamoeba castellanii str. Neff	14925756
ACA1_173900	CDS	ACA1_173900	NW_004457702.1	543017	545624	D	encoded by transcript ACA1_173900A; Fbox domain containing protein	join(543017..543324,543407..543588,543752..543848,543940..544001,544114..544214,544299..544990,545109..545228,545363..545624)	Acanthamoeba castellanii str. Neff	14925757
ACA1_173910	CDS	ACA1_173910	NW_004457702.1	546191	547611	D	encoded by transcript ACA1_173910A; aimless RasGEF, putative	join(546191..546439,546565..546726,546853..546969,547057..547154,547235..547310,547405..547611)	Acanthamoeba castellanii str. Neff	14925758
ACA1_173920	CDS	ACA1_173920	NW_004457702.1	547785	548484	D	encoded by transcript ACA1_173920A; uncharacterized protein	join(547785..547832,547916..547976,548118..548145,548195..548369,548434..548484)	Acanthamoeba castellanii str. Neff	14925759
ACA1_173930	CDS	ACA1_173930	NW_004457702.1	548588	549363	D	encoded by transcript ACA1_173930A; dual specificity phosphatase, catalytic domain containing protein	join(548588..548888,548987..549162,549298..549363)	Acanthamoeba castellanii str. Neff	14925760
ACA1_173940	CDS	ACA1_173940	NW_004457702.1	549453	553067	R	encoded by transcript ACA1_173940A; SH3 domain containing protein	complement(join(549453..549505,549566..549632,549761..549841,549938..550237,550341..550481,550575..550705,550804..550927,551064..551186,551274..551356,551441..551495,551605..551966,552073..552223,552300..552431,552524..552588,552665..552787,552893..553067))	Acanthamoeba castellanii str. Neff	14925761
ACA1_173950	CDS	ACA1_173950	NW_004457702.1	553401	557191	D	encoded by transcript ACA1_173950A; XPG Iregion domain containing protein	join(553401..553448,553666..553805,553851..553974,554094..554231,554336..554665,554762..554823,554982..555227,555306..555426,555615..555665,555775..556030,556111..556965,557036..557150,557179..557191)	Acanthamoeba castellanii str. Neff	14925762
ACA1_173960	CDS	ACA1_173960	NW_004457702.1	557880	561203	D	encoded by transcript ACA1_173960A; hydrolase, alpha/beta fold domain containing protein	join(557880..558843,558946..559029,559107..559170,559341..559412,559501..559561,559639..559707,559807..559882,559988..560049,560213..560391,560480..560552,560656..560758,560884..561203)	Acanthamoeba castellanii str. Neff	14925763
ACA1_173970	CDS	ACA1_173970	NW_004457702.1	561360	564172	D	encoded by transcript ACA1_173970A; aldehyde dehydrogenase	join(561360..561495,561581..561603,561699..561740,561855..562086,562191..562272,562443..562536,562625..562952,563045..563165,563246..563443,563553..563919,564017..564172)	Acanthamoeba castellanii str. Neff	14925764
ACA1_173980	CDS	ACA1_173980	NW_004457702.1	564299	566438	R	encoded by transcript ACA1_173980A; OTU family cysteine protease	complement(join(564299..564374,564462..564541,564687..564749,564871..564972,565100..565195,565306..565443,565558..565611,565738..565980,566109..566438))	Acanthamoeba castellanii str. Neff	14925765
ACA1_173990	CDS	ACA1_173990	NW_004457702.1	567006	568615	D	encoded by transcript ACA1_173990A; protein phosphatase 1, catalytic subunit, alpha, putative	join(567006..567183,567276..567506,567620..567796,567876..568162,568225..568237,568416..568615)	Acanthamoeba castellanii str. Neff	14925766
ACA1_174000	CDS	ACA1_174000	NW_004457702.1	568911	569295	R	encoded by transcript ACA1_174000A; uncharacterized protein	complement(join(568911..569020,569125..569158,569236..569295))	Acanthamoeba castellanii str. Neff	14925767
ACA1_174010	CDS	ACA1_174010	NW_004457702.1	569525	573473	R	encoded by transcript ACA1_174010A; RhoGAP domain containing protein	complement(join(569525..569758,569860..571311,571742..571816,571929..572004,572130..572223,572344..572451,572566..572622,572756..572836,573058..573135,573302..573473))	Acanthamoeba castellanii str. Neff	14925768
ACA1_174020	CDS	ACA1_174020	NW_004457702.1	574116	579364	D	encoded by transcript ACA1_174020A; Ankyrin repeatcontaining protein	join(574116..574191,574371..574492,574592..574696,574832..574990,575083..575216,575273..575342,575457..575633,575721..576234,576370..576493,576582..576692,576792..577256,577351..577874,577960..578190,578327..578459,578560..578701,578846..579364)	Acanthamoeba castellanii str. Neff	14925769
ACA1_174030	CDS	ACA1_174030	NW_004457702.1	579568	580480	R	encoded by transcript ACA1_174030A; uncharacterized protein	complement(join(579568..579594,579734..580086,580178..580222,580324..580480))	Acanthamoeba castellanii str. Neff	14925770
ACA1_174040	CDS	ACA1_174040	NW_004457702.1	580957	587062	R	encoded by transcript ACA1_174040A; protein kinase domain containing protein	complement(join(580957..581343,581476..581630,581810..582067,582232..582306,582434..582589,582775..582841,583014..583144,583297..583448,583602..583669,583752..584027,584117..584176,584280..584483,584617..584831,584976..585155,585295..585390,585507..585590,585729..585983,586096..586167,586250..586408,586514..586577,586705..586790,586912..587062))	Acanthamoeba castellanii str. Neff	14925771
ACA1_174050	CDS	ACA1_174050	NW_004457702.1	587340	589459	R	encoded by transcript ACA1_174050A; uncharacterized protein	complement(join(587340..588256,588404..588559,588721..588880,588917..589005,589184..589289,589433..589459))	Acanthamoeba castellanii str. Neff	14925772
ACA1_174060	CDS	ACA1_174060	NW_004457702.1	589896	592830	D	encoded by transcript ACA1_174060A; K+ channel tetramerization subfamily protein	join(589896..590327,590507..590559,590667..590785,590952..591040,591264..591358,591599..591773,591978..592149,592357..592473,592556..592830)	Acanthamoeba castellanii str. Neff	14925773
ACA1_174080	CDS	ACA1_174080	NW_004457702.1	602701	603513	R	encoded by transcript ACA1_174080A; vesicle soluble NSF attachment protein receptor VTI2, putative	complement(join(602701..602739,602888..603013,603120..603293,603418..603513))	Acanthamoeba castellanii str. Neff	14925775
ACA1_174090	CDS	ACA1_174090	NW_004457702.1	603741	606037	D	encoded by transcript ACA1_174090A; hydrolase, alpha/beta fold domain containing protein	join(603741..604092,604229..604376,604510..604600,604701..604785,604972..605184,605311..605541,605627..605739,605849..606037)	Acanthamoeba castellanii str. Neff	14925776
ACA1_174100	CDS	ACA1_174100	NW_004457702.1	610167	612907	R	encoded by transcript ACA1_174100A; protein kinase domain containing protein	complement(join(610167..610391,610452..610651,610718..610811,610871..610992,611070..611205,611285..611387,611489..611588,611683..611805,611900..612023,612113..612180,612318..612490,612575..612759,612869..612907))	Acanthamoeba castellanii str. Neff	14925777
ACA1_174110	CDS	ACA1_174110	NW_004457702.1	613930	615000	D	encoded by transcript ACA1_174110A; uncharacterized protein	join(613930..614151,614253..614339,614453..614529,614650..614875,614965..615000)	Acanthamoeba castellanii str. Neff	14925778
ACA1_174120	CDS	ACA1_174120	NW_004457702.1	615081	618400	D	encoded by transcript ACA1_174120A; uncharacterized protein	join(615081..615172,615370..615502,615632..615893,616052..616213,616384..616499,616686..616788,617060..617217,617362..617476,617590..617766,617895..617947,618048..618207,618270..618400)	Acanthamoeba castellanii str. Neff	14925779
ACA1_174130	CDS	ACA1_174130	NW_004457702.1	618536	620583	R	encoded by transcript ACA1_174130A; Hsp40, putative	complement(join(618536..618632,618698..618819,618917..619038,619158..619526,619709..619845,619989..620269,620431..620583))	Acanthamoeba castellanii str. Neff	14925780
ACA1_174150	CDS	ACA1_174150	NW_004457702.1	629227	630701	R	encoded by transcript ACA1_174150A; uncharacterized protein	complement(join(629227..629312,629412..629625,629693..629790,629948..630701))	Acanthamoeba castellanii str. Neff	14925782
ACA1_174160	CDS	ACA1_174160	NW_004457702.1	631125	631940	D	encoded by transcript ACA1_174160A; uncharacterized protein	631125..631940	Acanthamoeba castellanii str. Neff	14925783
ACA1_174170	CDS	ACA1_174170	NW_004457702.1	632143	633207	R	encoded by transcript ACA1_174170A; glutathione Stransferase, C-terminal domain containing protein	complement(join(632143..632361,632468..632679,632835..632983,633101..633207))	Acanthamoeba castellanii str. Neff	14925784
ACA1_174180	CDS	ACA1_174180	NW_004457702.1	633420	634592	D	encoded by transcript ACA1_174180A; uncharacterized protein	join(633420..633511,633629..633984,634066..634176,634270..634592)	Acanthamoeba castellanii str. Neff	14925785
ACA1_174190	CDS	ACA1_174190	NW_004457702.1	635011	638493	R	encoded by transcript ACA1_174190A; nicotinate phosphoribosyltransferase	complement(join(635011..635164,635424..635593,635766..635864,635990..636401,636507..636646,636862..636963,637164..637235,637344..637429,637522..637660,637821..637978,638130..638493))	Acanthamoeba castellanii str. Neff	14925786
ACA1_174200	CDS	ACA1_174200	NW_004457702.1	638769	640901	R	encoded by transcript ACA1_174200A; Aga27A, putative	complement(join(638769..638941,639015..639408,639576..639607,639747..639847,639950..640086,640208..640250,640355..640614,640818..640901))	Acanthamoeba castellanii str. Neff	14925787
ACA1_174210	CDS	ACA1_174210	NW_004457702.1	641139	645045	D	encoded by transcript ACA1_174210A; uncharacterized protein	join(641139..641230,641356..641491,641622..642915,643056..643110,643211..643281,643457..643605,643688..643874,643994..645045)	Acanthamoeba castellanii str. Neff	14925788
ACA1_174220	CDS	ACA1_174220	NW_004457702.1	645245	652324	D	encoded by transcript ACA1_174220A; TBC domain containing protein	join(645245..646511,646690..646847,646938..647027,647116..647185,647287..647385,647584..647684,647757..647849,648007..648113,648197..648453,648595..648716,648839..648961,649067..649169,649272..649429,649503..649679,649877..652324)	Acanthamoeba castellanii str. Neff	14925789
ACA1_174230	CDS	ACA1_174230	NW_004457702.1	652419	652996	D	encoded by transcript ACA1_174230A; Rab5interacting protein (Rab5ip)	join(652419..652526,652597..652700,652762..652996)	Acanthamoeba castellanii str. Neff	14925790
ACA1_174240	CDS	ACA1_174240	NW_004457702.1	653178	654031	R	encoded by transcript ACA1_174240A; rho guanine dissociation factor isoform 2, putative	complement(join(653178..653383,653462..653698,653875..654031))	Acanthamoeba castellanii str. Neff	14925791
ACA1_174250	CDS	ACA1_174250	NW_004457702.1	654551	656454	R	encoded by transcript ACA1_174250A; e3 ubiquitinprotein ligase rbra, putative	complement(join(654551..655187,655278..655804,656077..656454))	Acanthamoeba castellanii str. Neff	14925792
ACA1_174260	CDS	ACA1_174260	NW_004457702.1	656919	658645	R	encoded by transcript ACA1_174260A; asparagine-tRNA ligase	complement(join(656919..657893,658139..658645))	Acanthamoeba castellanii str. Neff	14925793
ACA1_174270	CDS	ACA1_174270	NW_004457702.1	659469	661089	R	encoded by transcript ACA1_174270A; uncharacterized protein	complement(join(659469..659502,659519..660171,660322..661089))	Acanthamoeba castellanii str. Neff	14925794
ACA1_174280	CDS	ACA1_174280	NW_004457702.1	661199	661741	R	encoded by transcript ACA1_174280A; uncharacterized protein	complement(661199..661741)	Acanthamoeba castellanii str. Neff	14925795
ACA1_174290	CDS	ACA1_174290	NW_004457702.1	662811	663566	D	encoded by transcript ACA1_174290A; uncharacterized protein	join(662811..662831,662881..663231,663248..663263,663364..663566)	Acanthamoeba castellanii str. Neff	14925796
ACA1_174300	CDS	ACA1_174300	NW_004457702.1	664290	664856	D	encoded by transcript ACA1_174300A; uncharacterized protein	join(664290..664482,664562..664726,664786..664856)	Acanthamoeba castellanii str. Neff	14925797
ACA1_174320	CDS	ACA1_174320	NW_004457702.1	672622	675618	R	encoded by transcript ACA1_174320A; NOL1/NOP2/sun family putative RNA methylase subfamily protein	complement(join(672622..672925,673030..673157,673172..673200,673237..673384,673525..673669,673749..673833,673926..674066,674146..674323,674424..674632,674744..674909,674995..675198,675286..675618))	Acanthamoeba castellanii str. Neff	14925799
ACA1_174330	CDS	ACA1_174330	NW_004457702.1	675854	677979	D	encoded by transcript ACA1_174330A; adaptorrelated protein complex 1, mu 1 subunit isoform 10, putative	join(675854..675889,675975..676134,676198..676265,676366..676496,676691..676835,676971..677222,677329..677514,677591..677827,677920..677979)	Acanthamoeba castellanii str. Neff	14925800
ACA1_174340	CDS	ACA1_174340	NW_004457702.1	678224	679565	D	encoded by transcript ACA1_174340A; actinrelated protein 2 isoform 4, putative	join(678224..678640,678733..678966,679050..679565)	Acanthamoeba castellanii str. Neff	14925801
ACA1_174350	CDS	ACA1_174350	NW_004457702.1	679701	680449	R	encoded by transcript ACA1_174350A; uncharacterized protein	complement(join(679701..679773,679890..680064,680126..680185,680248..680449))	Acanthamoeba castellanii str. Neff	14925802
ACA1_174360	CDS	ACA1_174360	NW_004457702.1	681622	690002	D	encoded by transcript ACA1_174360A; DENN (AEX3) domain containing protein	join(681622..681790,681894..681973,682016..682268,682380..682494,682647..682741,682871..682956,683053..683181,683285..683434,683541..683619,683743..683850,683982..684230,684346..684707,684920..685099,685182..685277,685390..685696,685857..685991,686060..686319,686418..686633,686766..686906,687064..687260,687313..687443,687531..687631,687759..687848,687944..688066,688148..688255,688381..688494,688665..688820,688950..689131,689232..689466,689595..689703,689821..690002)	Acanthamoeba castellanii str. Neff	14925803
ACA1_174370	CDS	ACA1_174370	NW_004457702.1	690411	690900	D	encoded by transcript ACA1_174370A; uncharacterized protein	join(690411..690521,690538..690900)	Acanthamoeba castellanii str. Neff	14925804
ACA1_174380	CDS	ACA1_174380	NW_004457702.1	691020	692380	D	encoded by transcript ACA1_174380A; ubiquinone/menaquinone biosynthesis-related protein	join(691020..691296,691402..691509,691982..692069,692167..692264,692340..692380)	Acanthamoeba castellanii str. Neff	14925805
ACA1_174390	CDS	ACA1_174390	NW_004457702.1	692445	695127	R	encoded by transcript ACA1_174390A; uncharacterized protein	complement(join(692445..693065,693186..693290,693419..693563,693663..693823,693930..694028,694093..694296,694426..694569,694716..694835,694981..695127))	Acanthamoeba castellanii str. Neff	14925806
ACA1_174400	CDS	ACA1_174400	NW_004457702.1	696186	699424	D	encoded by transcript ACA1_174400A; protein kinase domain containing protein	join(696186..696255,696568..696660,696682..696755,696857..696940,697101..697535,697666..697800,697881..698009,698174..698264,698376..698584,698660..698779,698877..698963,699067..699184,699291..699424)	Acanthamoeba castellanii str. Neff	14925807
ACA1_174410	CDS	ACA1_174410	NW_004457702.1	699627	701959	R	encoded by transcript ACA1_174410A; nucleoside diphosphate kinase	complement(join(699627..699829,699949..700074,700165..700361,700456..700522,700585..700656,700753..700864,700965..701041,701120..701240,701370..701429,701610..701747,701855..701959))	Acanthamoeba castellanii str. Neff	14925808
ACA1_174420	CDS	ACA1_174420	NW_004457702.1	702784	707435	D	encoded by transcript ACA1_174420A; diacylglycerol kinase catalytic domain containing protein	join(702784..703438,703686..703786,704389..704439,704561..704764,704896..705060,705192..705401,705496..705666,705928..706041,706114..706402,706592..706944,707020..707277,707355..707435)	Acanthamoeba castellanii str. Neff	14925809
ACA1_174430	CDS	ACA1_174430	NW_004457702.1	707714	708275	D	encoded by transcript ACA1_174430A; ribosomal protein S15, putative	join(707714..707948,708055..708275)	Acanthamoeba castellanii str. Neff	14925810
ACA1_174440	CDS	ACA1_174440	NW_004457702.1	708499	710156	R	encoded by transcript ACA1_174440A; zinc knuckle domain containing protein	complement(join(708499..708597,708676..708751,708844..709030,709166..709239,709357..709525,709603..709874,709978..710156))	Acanthamoeba castellanii str. Neff	14925811
ACA1_174450	CDS	ACA1_174450	NW_004457702.1	710290	710985	D	encoded by transcript ACA1_174450A; Cwf15/Cwc15 cell cycle control protein	710290..710985	Acanthamoeba castellanii str. Neff	14925812
ACA1_174460	CDS	ACA1_174460	NW_004457702.1	711809	713033	D	encoded by transcript ACA1_174460A; zinc finger, C3HC4 type (RING finger) domain containing protein	join(711809..711909,712010..712130,712290..712418,712532..712639,712832..712909,712950..713033)	Acanthamoeba castellanii str. Neff	14925813
ACA1_174470	CDS	ACA1_174470	NW_004457702.1	713369	716077	D	encoded by transcript ACA1_174470A; uncharacterized protein	join(713369..713599,713665..714131,714207..714834,714925..715134,715252..715495,715581..715648,715706..715855,715949..716077)	Acanthamoeba castellanii str. Neff	14925814
ACA1_174480	CDS	ACA1_174480	NW_004457702.1	716706	718297	R	encoded by transcript ACA1_174480A; universal stress domain containing protein	complement(join(716706..717073,717228..717375,717474..717862,717985..718297))	Acanthamoeba castellanii str. Neff	14925815
ACA1_174490	CDS	ACA1_174490	NW_004457702.1	718699	720327	R	encoded by transcript ACA1_174490A; uncharacterized protein	complement(join(718699..718842,718934..719024,719111..719193,719305..719381,719459..719636,719699..719782,719866..719942,720024..720327))	Acanthamoeba castellanii str. Neff	14925816
ACA1_174500	CDS	ACA1_174500	NW_004457702.1	720903	722070	R	encoded by transcript ACA1_174500A; proteasome endopeptidase complex, archaeal, alpha subunit	complement(join(720903..721055,721136..721249,721360..721479,721591..721842,721975..722070))	Acanthamoeba castellanii str. Neff	14925817
ACA1_174510	CDS	ACA1_174510	NW_004457702.1	722389	725510	D	encoded by transcript ACA1_174510A; tRNA uridine 5carboxymethylaminomethyl modification enzyme GidA, putative	join(722389..722844,722869..722929,723045..723127,723231..723359,723442..723523,723602..723703,723795..723862,723976..724133,724266..724407,724538..724834,724946..725016,725142..725290,725404..725510)	Acanthamoeba castellanii str. Neff	14925818
ACA1_174520	CDS	ACA1_174520	NW_004457702.1	725568	728425	R	encoded by transcript ACA1_174520A; transporter, major facilitator subfamily protein	complement(join(725568..725938,726047..726167,726263..726372,726477..726612,726783..726853,726964..727079,727238..727307,727437..727710,727844..728425))	Acanthamoeba castellanii str. Neff	14925819
ACA1_174530	CDS	ACA1_174530	NW_004457702.1	728859	730644	R	encoded by transcript ACA1_174530A; syntaxin protein, putative	complement(join(728859..728963,729076..729222,729313..729494,729607..729730,729922..730058,730182..730392,730636..730644))	Acanthamoeba castellanii str. Neff	14925820
ACA1_174540	CDS	ACA1_174540	NW_004457702.1	731054	732886	R	encoded by transcript ACA1_174540A; fucosylgalactoside 3-alpha-galactosyltransferase	complement(join(731054..731377,731486..731587,731742..731798,731900..732033,732146..732266,732351..732520,732607..732772,732881..732886))	Acanthamoeba castellanii str. Neff	14925821
ACA1_174550	CDS	ACA1_174550	NW_004457702.1	735352	737677	R	encoded by transcript ACA1_174550A; uncharacterized protein	complement(join(735352..735885,736035..736136,736264..736338,736408..736496,736644..736773,736894..737063,737159..737324,737567..737677))	Acanthamoeba castellanii str. Neff	14925822
ACA1_174560	CDS	ACA1_174560	NW_004457702.1	737880	739564	R	encoded by transcript ACA1_174560A; uncharacterized protein	complement(join(737880..738048,738243..738363,738442..738569,738749..738953,739051..739201,739273..739385,739486..739564))	Acanthamoeba castellanii str. Neff	14925823
ACA1_174570	CDS	ACA1_174570	NW_004457702.1	739912	740855	R	encoded by transcript ACA1_174570A; uncharacterized protein	complement(join(739912..740012,740150..740855))	Acanthamoeba castellanii str. Neff	14925824
ACA1_174580	CDS	ACA1_174580	NW_004457702.1	741782	743236	R	encoded by transcript ACA1_174580A; uncharacterized protein	complement(join(741782..741842,741937..742076,742173..742359,742426..742640,742841..742969,743057..743236))	Acanthamoeba castellanii str. Neff	14925825
ACA1_174590	CDS	ACA1_174590	NW_004457702.1	743835	744476	D	encoded by transcript ACA1_174590A; uncharacterized protein	join(743835..743997,744179..744238,744316..744476)	Acanthamoeba castellanii str. Neff	14925826
ACA1_174600	CDS	ACA1_174600	NW_004457702.1	744705	748260	D	encoded by transcript ACA1_174600A; vault protein inter-alpha-trypsin protein	join(744705..744997,745160..745262,745368..745467,745604..745751,745873..746017,746130..746454,746618..746784,746890..747019,747152..747415,747553..747619,747727..748054,748123..748260)	Acanthamoeba castellanii str. Neff	14925827
ACA1_174610	CDS	ACA1_174610	NW_004457702.1	748601	749574	R	encoded by transcript ACA1_174610A; Rasrelated GTPase	complement(join(748601..748689,748788..749073,749184..749314,749523..749574))	Acanthamoeba castellanii str. Neff	14925828
ACA1_174620	CDS	ACA1_174620	NW_004457702.1	749953	750815	R	encoded by transcript ACA1_174620A; late embryogenesis abundant protein	complement(join(749953..750006,750084..750143,750212..750292,750422..750521,750620..750675,750783..750815))	Acanthamoeba castellanii str. Neff	14925829
ACA1_174630	CDS	ACA1_174630	NW_004457702.1	750895	753528	D	encoded by transcript ACA1_174630A; alanine aminotransferase, mitochondrial, putative	join(750895..750968,751097..751178,751362..751479,751687..751856,751962..752042,752185..752334,752444..752539,752642..752721,752809..753056,753150..753287,753401..753528)	Acanthamoeba castellanii str. Neff	14925830
ACA1_174640	CDS	ACA1_174640	NW_004457702.1	754438	755421	R	encoded by transcript ACA1_174640A; uncharacterized protein	complement(join(754438..754644,754764..755282,755359..755421))	Acanthamoeba castellanii str. Neff	14925831
ACA1_174660	CDS	ACA1_174660	NW_004457702.1	757009	758578	D	encoded by transcript ACA1_174660A; uncharacterized protein	join(757009..757087,757192..757290,757379..757452,757672..757992,758130..758237,758402..758578)	Acanthamoeba castellanii str. Neff	14925833
ACA1_174670	CDS	ACA1_174670	NW_004457702.1	759179	760450	R	encoded by transcript ACA1_174670A; uncharacterized protein	complement(join(759179..759453,759554..760248,760365..760450))	Acanthamoeba castellanii str. Neff	14925834
ACA1_174680	CDS	ACA1_174680	NW_004457702.1	760787	762769	R	encoded by transcript ACA1_174680A; acid phosphatase, putative	complement(join(760787..760858,760951..761015,761077..761196,761417..761468,761571..761763,761860..762007,762102..762159,762387..762482,762605..762769))	Acanthamoeba castellanii str. Neff	14925835
ACA1_174690	CDS	ACA1_174690	NW_004457702.1	763226	765751	D	encoded by transcript ACA1_174690A; NADdependent deacetylase sirtuin, putative	join(763226..763342,763465..763572,763646..763741,763817..763956,763991..764177,764252..764347,764423..764538,764596..764700,764768..764862,764945..765036,765104..765751)	Acanthamoeba castellanii str. Neff	14925836
ACA1_174700	CDS	ACA1_174700	NW_004457702.1	766269	767964	D	encoded by transcript ACA1_174700A; Peroxin 7 (Pex7), putative	join(766269..766395,766455..766526,766593..766669,766753..766818,766919..767007,767106..767355,767464..767573,767681..767823,767921..767964)	Acanthamoeba castellanii str. Neff	14925837
ACA1_174710	CDS	ACA1_174710	NW_004457702.1	768320	778657	D	encoded by transcript ACA1_174710A; myosin head (motor domain) domain containing protein	join(768320..768349,768563..768727,768814..768930,769034..769138,769257..769529,769653..769862,769960..770237,770313..770411,770524..770625,770741..771141,771280..771423,771512..771642,771735..772021,772135..772210,772302..772399,772497..772633,772743..772764,772775..772875,772980..773053,773183..773237,773358..774652,774739..775360,775477..775618,775704..775796,775931..775997,776098..776201,776290..776396,776478..776582,776702..776765,776884..777026,777166..777278,777364..777567,777649..777767,777848..778079,778193..778657)	Acanthamoeba castellanii str. Neff	14925838
ACA1_174720	CDS	ACA1_174720	NW_004457702.1	778764	781280	D	encoded by transcript ACA1_174720A; uncharacterized protein	join(778764..778863,778947..779066,779173..779230,779340..779577,779693..779873,780014..780157,780278..780392,780611..781280)	Acanthamoeba castellanii str. Neff	14925839
ACA1_174730	CDS	ACA1_174730	NW_004457702.1	781896	784486	R	encoded by transcript ACA1_174730A; guanine deaminase	complement(join(781896..782030,782128..782301,782403..782528,782724..782776,782874..783033,783157..783231,783328..783439,783519..783690,783815..783910,784000..784199,784302..784486))	Acanthamoeba castellanii str. Neff	14925840
ACA1_174740	CDS	ACA1_174740	NW_004457702.1	784668	787077	R	encoded by transcript ACA1_174740A; guanine deaminase	complement(join(784668..784868,784953..785078,785185..785237,785342..785501,785617..785706,785797..785908,785983..786154,786280..786375,786499..786636,786748..786809,786893..787077))	Acanthamoeba castellanii str. Neff	14925841
ACA1_174750	CDS	ACA1_174750	NW_004457702.1	787877	792324	D	encoded by transcript ACA1_174750A; zinc finger domain containing protein	join(787877..787932,788007..788196,788312..788374,788463..788780,788886..788984,789005..789133,789348..789407,789482..789559,789629..789822,789915..789963,790105..790287,790377..790603,790692..790869,790959..791176,791252..791376,791481..791788,791926..792324)	Acanthamoeba castellanii str. Neff	14925842
ACA1_174760	CDS	ACA1_174760	NW_004457702.1	792468	792749	D	encoded by transcript ACA1_174760A; Hydrolase	792468..792749	Acanthamoeba castellanii str. Neff	14925843
ACA1_174770	CDS	ACA1_174770	NW_004457702.1	792830	795134	R	encoded by transcript ACA1_174770A; leucinezipper-like transcriptional regulator 1 (LZTR-1), putative	complement(join(792830..792851,792865..793090,793179..793370,793445..793622,793728..793805,793903..793976,794042..794138,794201..794277,794368..794483,794557..794629,794707..794779,794861..794982,795089..795134))	Acanthamoeba castellanii str. Neff	14925844
ACA1_174780	CDS	ACA1_174780	NW_004457702.1	795387	796824	R	encoded by transcript ACA1_174780A; chitinaselike domain containing protein	complement(join(795387..795423,795516..795639,795803..795928,796074..796181,796276..796381,796509..796589,796789..796824))	Acanthamoeba castellanii str. Neff	14925845
ACA1_174790	CDS	ACA1_174790	NW_004457702.1	796952	798448	R	encoded by transcript ACA1_174790A; zinc finger protein	complement(796952..798448)	Acanthamoeba castellanii str. Neff	14925846
ACA1_174800	CDS	ACA1_174800	NW_004457702.1	798961	799245	R	encoded by transcript ACA1_174800A; uncharacterized protein	complement(join(798961..799136,799161..799245))	Acanthamoeba castellanii str. Neff	14925847
ACA1_174810	CDS	ACA1_174810	NW_004457702.1	800008	803954	D	encoded by transcript ACA1_174810A; cytochrome p450 superfamily protein	join(800008..800429,800600..800778,801141..801303,801388..801463,801556..801613,801714..801799,801901..802064,802185..803732,803810..803954)	Acanthamoeba castellanii str. Neff	14925848
ACA1_174820	CDS	ACA1_174820	NW_004457702.1	804268	806386	D	encoded by transcript ACA1_174820A; uncharacterized protein	join(804268..804508,804647..805082,805173..805288,805396..805494,805557..806386)	Acanthamoeba castellanii str. Neff	14925849
ACA1_174830	CDS	ACA1_174830	NW_004457702.1	806934	807837	R	encoded by transcript ACA1_174830A; uncharacterized protein	complement(join(806934..806973,807069..807218,807289..807482,807554..807701,807725..807837))	Acanthamoeba castellanii str. Neff	14925850
ACA1_174840	CDS	ACA1_174840	NW_004457702.1	809210	810247	R	encoded by transcript ACA1_174840A; helicase conserved Cterminal domain containing protein	complement(join(809210..809359,809428..810121,810210..810247))	Acanthamoeba castellanii str. Neff	14925851
ACA1_174850	CDS	ACA1_174850	NW_004457702.1	810355	812169	D	encoded by transcript ACA1_174850A; WD repeatcontaining protein 74, putative	join(810355..810394,810532..810671,810858..811173,811301..811408,811537..811627,811733..811896,811997..812169)	Acanthamoeba castellanii str. Neff	14925852
ACA1_174870	CDS	ACA1_174870	NW_004457702.1	813639	818242	D	encoded by transcript ACA1_174870A; cation transport domain containing protein	join(813639..813825,813929..814102,814366..814663,814763..814881,814963..815053,815150..815319,815370..815547,815682..815806,815877..815943,816035..816115,816187..816241,816344..816415,816540..816618,816754..816834,816980..817156,817213..817324,817489..818242)	Acanthamoeba castellanii str. Neff	14925854
ACA1_174880	CDS	ACA1_174880	NW_004457702.1	818367	821260	R	encoded by transcript ACA1_174880A; cation transport domain containing protein	complement(join(818367..818739,818838..818949,819066..819245,819329..819421,819737..819815,819883..819954,820040..820094,820178..820258,820327..820393,820488..820612,820693..820843,820916..821070,821208..821260))	Acanthamoeba castellanii str. Neff	14925855
ACA1_174890	CDS	ACA1_174890	NW_004457702.1	822699	824252	R	encoded by transcript ACA1_174890A; uncharacterized protein	complement(join(822699..822848,822938..823126,823219..823407,823519..823623,823728..824252))	Acanthamoeba castellanii str. Neff	14925856
ACA1_174900	CDS	ACA1_174900	NW_004457702.1	825451	826356	R	encoded by transcript ACA1_174900A; Rasrelated protein Rab-32, putative	complement(join(825451..825747,825844..825982,826066..826211,826288..826356))	Acanthamoeba castellanii str. Neff	14925857
ACA1_174910	CDS	ACA1_174910	NW_004457702.1	826818	827902	D	encoded by transcript ACA1_174910A; ribosomal protein L19e, putative	join(826818..826929,827011..827254,827329..827902)	Acanthamoeba castellanii str. Neff	14925858
ACA1_174930	CDS	ACA1_174930	NW_004457702.1	829882	831773	R	encoded by transcript ACA1_174930A; GlcNAc transferase	complement(join(829882..830013,830073..830177,830264..830378,830553..830708,830863..831159,831278..831632,831728..831773))	Acanthamoeba castellanii str. Neff	14925860
ACA1_175040	CDS	ACA1_175040	NW_004457702.1	832328	836901	D	encoded by transcript ACA1_175040A; Rad17 cell cycle checkpoint protein	join(832328..832870,833000..833091,833208..833432,833470..833893,834004..834129,834295..834355,834466..834674,834803..834945,835069..835263,835339..835402,835487..835687,835777..835933,836199..836347,836466..836744,836881..836901)	Acanthamoeba castellanii str. Neff	14925861
ACA1_175050	CDS	ACA1_175050	NW_004457702.1	837017	839944	R	encoded by transcript ACA1_175050A; Ras subfamily protein	complement(join(837017..837143,837239..837351,837458..837646,837730..838030,838109..838308,838411..838514,838620..838828,838938..839119,839194..839295,839378..839515,839770..839828,839908..839944))	Acanthamoeba castellanii str. Neff	14925862
ACA1_175060	CDS	ACA1_175060	NW_004457702.1	840348	843766	D	encoded by transcript ACA1_175060A; vacuolar proton ATPase, putative	join(840348..840464,840735..840935,841013..841360,841435..841881,841974..842204,842284..842658,842725..842984,843236..843562,843667..843766)	Acanthamoeba castellanii str. Neff	14925863
ACA1_175070	CDS	ACA1_175070	NW_004457702.1	844334	848195	D	encoded by transcript ACA1_175070A; RasGEF domain containing protein	join(844334..844415,844439..844485,844544..844960,845064..845249,845357..845513,845667..845748,845892..845969,846082..846322,846443..846535,846653..846714,846928..847039,847182..847379,847507..847705,847829..847929,848028..848195)	Acanthamoeba castellanii str. Neff	14925864
ACA1_175080	CDS	ACA1_175080	NW_004457702.1	848506	851037	R	encoded by transcript ACA1_175080A; diphosphomevalonate decarboxylase	complement(join(848506..848583,848671..848833,848940..849086,849206..849297,849456..849551,849666..849694,849857..849950,850045..850114,850205..850274,850393..850619,850865..851037))	Acanthamoeba castellanii str. Neff	14925865
ACA1_175090	CDS	ACA1_175090	NW_004457702.1	851213	853959	R	encoded by transcript ACA1_175090A; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain containing protein	complement(join(851213..851297,851425..851795,851963..852095,852189..852327,852445..852799,852863..852988,853067..853805,853937..853959))	Acanthamoeba castellanii str. Neff	14925866
ACA1_175100	CDS	ACA1_175100	NW_004457702.1	854313	865526	R	encoded by transcript ACA1_175100A; myosin head (motor domain) domain containing protein	complement(join(854313..854414,854522..854641,854744..854824,854904..855087,855210..855492,855601..855793,855885..856049,856129..856213,856295..856431,856579..856727,856808..856912,857013..857304,857395..857517,857630..857785,857930..858121,858267..858353,858432..858591,858713..858815,858929..859126,859267..859438,859542..859770,859853..860064,860113..860220,860317..860401,860509..860644,860757..861518,861611..861743,861959..862122,862224..862329,862433..862671,862780..863041,863134..863286,863389..863466,863561..863826,863893..864025,864126..864229,864310..864394,864824..864992,865143..865339,865449..865526))	Acanthamoeba castellanii str. Neff	14925867
ACA1_175110	CDS	ACA1_175110	NW_004457702.1	866236	867299	R	encoded by transcript ACA1_175110A; uncharacterized protein	complement(join(866236..866250,866283..866353,866454..866591,866680..866763,866826..866898,866976..867082,867170..867299))	Acanthamoeba castellanii str. Neff	14925868
ACA1_175120	CDS	ACA1_175120	NW_004457702.1	868271	869370	D	encoded by transcript ACA1_175120A; uncharacterized protein	join(868271..868339,868428..868532,868645..868745,868832..868931,869018..869200,869281..869370)	Acanthamoeba castellanii str. Neff	14925869
ACA1_175130	CDS	ACA1_175130	NW_004457702.1	869656	871067	D	encoded by transcript ACA1_175130A; Rab8/RabEfamily small GTPase, putative	join(869656..869713,869849..869921,870043..870128,870284..870364,870498..870592,870683..870739,870800..870892,870984..871067)	Acanthamoeba castellanii str. Neff	14925870
ACA1_175140	CDS	ACA1_175140	NW_004457702.1	871548	872051	R	encoded by transcript ACA1_175140A; uncharacterized protein	complement(871548..872051)	Acanthamoeba castellanii str. Neff	14925871
ACA1_175150	CDS	ACA1_175150	NW_004457702.1	872483	877716	D	encoded by transcript ACA1_175150A; DEAD/H (AspGlu-Ala-Asp/His) box polypeptide 11, putative	join(872483..872539,872618..872774,872837..872915,872990..873078,873160..873518,873759..873842,873893..874159,874252..874347,874438..874506,874603..874686,874791..875135,875267..875327,875615..875731,875854..875966,876114..876207,876310..876413,876530..876622,876764..876922,877043..877482,877566..877716)	Acanthamoeba castellanii str. Neff	14925872
ACA1_175160	CDS	ACA1_175160	NW_004457702.1	877841	879744	R	encoded by transcript ACA1_175160A; alpha/beta hydrolase fold domain containing protein	complement(join(877841..878593,878609..878633,878729..879744))	Acanthamoeba castellanii str. Neff	14925873
ACA1_175170	CDS	ACA1_175170	NW_004457702.1	880450	883803	D	encoded by transcript ACA1_175170A; cytochrome p450 superfamily protein	join(880450..880491,880583..880690,880883..880994,881077..881119,881308..881519,881652..881764,882089..882236,882418..882491,882717..882791,882890..882990,883078..883159,883274..883462,883575..883646,883729..883803)	Acanthamoeba castellanii str. Neff	14925874
ACA1_175180	CDS	ACA1_175180	NW_004457702.1	883956	886247	R	encoded by transcript ACA1_175180A; uncharacterized protein	complement(join(883956..884221,884375..884473,884539..884659,884733..884817,884952..885177,885287..885424,885507..885607,885675..885912,886001..886120,886196..886247))	Acanthamoeba castellanii str. Neff	14925875
ACA1_175190	CDS	ACA1_175190	NW_004457702.1	886652	890962	R	encoded by transcript ACA1_175190A; 6phosphofructokinase	complement(join(886652..886865,886942..887022,887138..887219,887303..887415,887521..887687,887765..887968,888080..888169,888273..888409,888487..888583,888653..888787,888889..889017,889109..889204,889264..889336,889426..889550,889632..889774,889837..889957,890045..890176,890305..890406,890537..890962))	Acanthamoeba castellanii str. Neff	14925876
ACA1_175200	CDS	ACA1_175200	NW_004457702.1	891499	893500	D	encoded by transcript ACA1_175200A; mandelate racemase/muconate lactonizing enzyme family protein	join(891499..891550,891662..891815,891940..892300,892427..892576,892660..892774,892843..892915,892989..893086,893174..893274,893348..893500)	Acanthamoeba castellanii str. Neff	14925877
ACA1_175210	CDS	ACA1_175210	NW_004457702.1	893861	894360	R	encoded by transcript ACA1_175210A; uncharacterized protein	complement(join(893861..893982,894030..894360))	Acanthamoeba castellanii str. Neff	14925878
ACA1_175220	CDS	ACA1_175220	NW_004457702.1	894887	895810	D	encoded by transcript ACA1_175220A; uncharacterized protein	join(894887..895071,895154..895268,895356..895497,895582..895662,895761..895810)	Acanthamoeba castellanii str. Neff	14925879
ACA1_175230	CDS	ACA1_175230	NW_004457702.1	896803	897941	D	encoded by transcript ACA1_175230A; phosphoglycerate mutase family domain containing protein	join(896803..896837,896920..897044,897137..897406,897511..897665,897737..897840,897923..897941)	Acanthamoeba castellanii str. Neff	14925880
ACA1_175240	CDS	ACA1_175240	NW_004457702.1	898368	899469	D	encoded by transcript ACA1_175240A; Rab32 protein, putative	join(898368..898440,898513..898596,898671..898728,898814..898952,899087..899197,899284..899469)	Acanthamoeba castellanii str. Neff	14925881
ACA1_175250	CDS	ACA1_175250	NW_004457702.1	899871	900387	D	encoded by transcript ACA1_175250A; cytochrome c, putative	join(899871..899981,900139..900387)	Acanthamoeba castellanii str. Neff	14925882
ACA1_175260	CDS	ACA1_175260	NW_004457702.1	901092	905032	R	encoded by transcript ACA1_175260A; DnaK family superfamily protein	complement(join(901092..901448,901572..901710,901829..902010,902155..902208,902291..902557,902637..902990,903065..903310,903407..903903,903990..904084,904199..904326,904428..904673,904790..905032))	Acanthamoeba castellanii str. Neff	14925883
ACA1_175270	CDS	ACA1_175270	NW_004457702.1	905545	906270	R	encoded by transcript ACA1_175270A; uncharacterized protein	complement(905545..906270)	Acanthamoeba castellanii str. Neff	14925884
ACA1_175280	CDS	ACA1_175280	NW_004457702.1	906622	908619	D	encoded by transcript ACA1_175280A; alcohol dehydrogenase zinc-binding domain containing protein	join(906622..907042,907155..907267,907362..907494,907572..907705,907785..907913,908011..908619)	Acanthamoeba castellanii str. Neff	14925885
ACA1_175290	CDS	ACA1_175290	NW_004457702.1	909020	913653	D	encoded by transcript ACA1_175290A; RUN domain containing protein	join(909020..909044,909176..909445,909524..909641,909759..909914,910039..910695,910789..911969,912315..912442,912588..912677,912800..912988,913094..913243,913336..913653)	Acanthamoeba castellanii str. Neff	14925886
ACA1_175300	CDS	ACA1_175300	NW_004457702.1	914049	919025	D	encoded by transcript ACA1_175300A; zinc knuckle domain containing protein	join(914049..914599,914662..914797,914890..915015,915101..915679,915776..915890,915980..916822,916910..916987,917074..917192,917275..917788,917883..918076,918166..918255,918345..918536,918633..919025)	Acanthamoeba castellanii str. Neff	14925887
ACA1_175310	CDS	ACA1_175310	NW_004457702.1	919203	920009	D	encoded by transcript ACA1_175310A; uncharacterized protein	join(919203..919281,919342..920009)	Acanthamoeba castellanii str. Neff	14925888
ACA1_175320	CDS	ACA1_175320	NW_004457702.1	920151	924110	D	encoded by transcript ACA1_175320A; RNA recognition motif domain containing protein	join(920151..920261,920397..920683,920777..920948,921023..921188,921259..921704,921779..922030,922154..922300,922397..922788,922872..923375,923493..923655,923723..923825,923959..924110)	Acanthamoeba castellanii str. Neff	14925889
ACA1_175330	CDS	ACA1_175330	NW_004457702.1	924335	933821	D	encoded by transcript ACA1_175330A; uncharacterized protein	join(924335..924695,925109..925304,925463..925591,925790..925913,926028..926141,926231..926437,926547..926873,926957..927016,927088..927164,927296..927644,927733..927959,928054..928125,928223..928402,928484..928582,928673..928805,928900..929151,929210..929308,929366..929503,929606..929678,929794..929870,929976..930186,930261..930437,930547..931883,931989..933821)	Acanthamoeba castellanii str. Neff	14925890
ACA1_175350	CDS	ACA1_175350	NW_004457702.1	934993	937252	R	encoded by transcript ACA1_175350A; leucine rich repeat domain containing protein	complement(join(934993..935112,935283..935399,935505..935647,935773..937252))	Acanthamoeba castellanii str. Neff	14925892
ACA1_175360	CDS	ACA1_175360	NW_004457702.1	937541	939352	R	encoded by transcript ACA1_175360A; PB1 domain containing protein	complement(937541..939352)	Acanthamoeba castellanii str. Neff	14925893
ACA1_175370	CDS	ACA1_175370	NW_004457702.1	939961	940821	R	encoded by transcript ACA1_175370A; uncharacterized protein	complement(join(939961..940048,940117..940214,940280..940423,940502..940606,940699..940821))	Acanthamoeba castellanii str. Neff	14925894
ACA1_175380	CDS	ACA1_175380	NW_004457702.1	941199	943535	R	encoded by transcript ACA1_175380A; adenylosuccinate synthetase	complement(join(941199..941249,941314..941382,941499..941666,941773..941864,941946..942048,942275..942411,942481..942718,942820..942964,943128..943216,943317..943360,943436..943535))	Acanthamoeba castellanii str. Neff	14925895
ACA1_175390	CDS	ACA1_175390	NW_004457702.1	944341	944651	D	encoded by transcript ACA1_175390A; uncharacterized protein	join(944341..944517,944529..944651)	Acanthamoeba castellanii str. Neff	14925896
ACA1_175400	CDS	ACA1_175400	NW_004457702.1	944734	947702	R	encoded by transcript ACA1_175400A; sulfate adenylyltransferase	complement(join(944734..944856,944957..945106,945117..945408,945522..945615,945864..945976,946108..946138,946257..946311,946399..946487,946598..946664,946771..946871,946963..947103,947415..947601,947679..947702))	Acanthamoeba castellanii str. Neff	14925897
ACA1_175410	CDS	ACA1_175410	NW_004457702.1	947834	950129	R	encoded by transcript ACA1_175410A; peptidase M28, putative	complement(join(947834..947995,948071..948234,948357..948588,948609..948668,948753..948890,948980..949238,949312..949459,949563..949880,949964..950129))	Acanthamoeba castellanii str. Neff	14925898
ACA1_175420	CDS	ACA1_175420	NW_004457702.1	950346	952322	D	encoded by transcript ACA1_175420A; uncharacterized protein	join(950346..950453,950570..950678,950793..950929,951145..951239,951333..951379,951466..952322)	Acanthamoeba castellanii str. Neff	14925899
ACA1_175430	CDS	ACA1_175430	NW_004457702.1	952799	953213	D	encoded by transcript ACA1_175430A; uncharacterized protein	join(952799..952908,953006..953213)	Acanthamoeba castellanii str. Neff	14925900
ACA1_175440	CDS	ACA1_175440	NW_004457702.1	953435	955028	R	encoded by transcript ACA1_175440A; uncharacterized protein	complement(join(953435..953644,953728..953791,953874..953959,954045..954336,954401..954636,954715..954846,954924..955028))	Acanthamoeba castellanii str. Neff	14925901
ACA1_175450	CDS	ACA1_175450	NW_004457702.1	955851	961566	D	encoded by transcript ACA1_175450A; shikimate kinase	join(955851..956192,956281..956344,956520..956579,956666..956796,956892..957155,957243..957362,957480..957658,957769..957890,958048..958151,958227..958359,958442..958584,958692..958815,958932..959065,959134..959415,959522..959724,959838..960336,960451..961420,961514..961566)	Acanthamoeba castellanii str. Neff	14925902
ACA1_175460	CDS	ACA1_175460	NW_004457702.1	961751	964600	R	encoded by transcript ACA1_175460A; uncharacterized protein	complement(join(961751..961909,962143..962192,962319..962406,962513..964122,964195..964317,964395..964477,964536..964600))	Acanthamoeba castellanii str. Neff	14925903
ACA1_175470	CDS	ACA1_175470	NW_004457702.1	964768	966641	R	encoded by transcript ACA1_175470A; endonuclease/exonuclease/phosphatase family protein	complement(join(964768..964863,964933..965023,965087..965168,965213..965289,965367..965442,965544..965619,965723..965837,965905..965995,966099..966160,966236..966321,966381..966455,966549..966641))	Acanthamoeba castellanii str. Neff	14925904
ACA1_175480	CDS	ACA1_175480	NW_004457702.1	966859	968594	R	encoded by transcript ACA1_175480A; PQ loop repeat-containing protein	complement(join(966859..966948,967027..967132,967223..967302,967380..967451,967559..967654,967754..967852,967932..968007,968098..968171,968269..968406,968490..968594))	Acanthamoeba castellanii str. Neff	14925905
ACA1_175490	CDS	ACA1_175490	NW_004457702.1	968813	971470	R	encoded by transcript ACA1_175490A; variant sh3 domain containing protein	complement(join(968813..969748,969831..970190,970286..970354,970434..970681,971017..971470))	Acanthamoeba castellanii str. Neff	14925906
ACA1_175500	CDS	ACA1_175500	NW_004457702.1	971622	972594	D	encoded by transcript ACA1_175500A; uncharacterized protein	join(971622..971749,971967..972594)	Acanthamoeba castellanii str. Neff	14925907
ACA1_175510	CDS	ACA1_175510	NW_004457702.1	972751	974981	D	encoded by transcript ACA1_175510A; xylose isomerase	join(972751..972796,972991..973153,973245..973424,973514..973602,973688..973863,973951..974008,974098..974171,974270..974342,974434..974652,974746..974981)	Acanthamoeba castellanii str. Neff	14925908
ACA1_175520	CDS	ACA1_175520	NW_004457702.1	975117	984676	R	encoded by transcript ACA1_175520A; KID repeat-containing protein	complement(join(975117..975242,975341..976954,977079..977129,977209..982068,982167..982226,982288..983671,983753..983853,983977..984104,984176..984256,984335..984440,984548..984676))	Acanthamoeba castellanii str. Neff	14925909
ACA1_175530	CDS	ACA1_175530	NW_004457702.1	985020	987210	D	encoded by transcript ACA1_175530A; nitrogen permase, putative	join(985020..985093,985181..985265,985350..985405,985490..985583,985660..985768,985846..985916,985985..986050,986137..986271,986355..986448,986563..986680,986780..986908,987013..987053,987137..987210)	Acanthamoeba castellanii str. Neff	14925910
ACA1_175540	CDS	ACA1_175540	NW_004457702.1	987503	989119	D	encoded by transcript ACA1_175540A; ATPase, AAA domain containing protein	join(987503..988774,988790..989119)	Acanthamoeba castellanii str. Neff	14925911
ACA1_175550	CDS	ACA1_175550	NW_004457702.1	989211	995009	D	encoded by transcript ACA1_175550A; adaptin subfamily protein	join(989211..989378,989444..989512,989590..989685,989768..989869,989964..990085,990182..990341,990482..990788,990880..990982,991078..991667,991799..991926,992018..992088,992154..992284,992354..992678,992756..992901,992974..993062,993157..993424,993527..993600,993681..993798,993907..994091,994170..994316,994420..994657,994771..994867,994946..995009)	Acanthamoeba castellanii str. Neff	14925912
ACA1_175560	CDS	ACA1_175560	NW_004457702.1	995070	997521	R	encoded by transcript ACA1_175560A; uncharacterized protein	complement(join(995070..995321,995413..995660,995773..995921,996021..996255,996346..996616,996737..996921,997010..997100,997209..997300,997413..997521))	Acanthamoeba castellanii str. Neff	14925913
ACA1_175570	CDS	ACA1_175570	NW_004457702.1	997784	1002782	R	encoded by transcript ACA1_175570A; RhoGEF domain containing protein	complement(join(997784..997818,997934..998021,998121..998291,998504..998587,998682..998741,998830..998928,999027..999140,999246..999335,999509..999586,999704..999799,999903..1000054,1000172..1000302,1000381..1000430,1000539..1000754,1000857..1001126,1001202..1002782))	Acanthamoeba castellanii str. Neff	14925914
ACA1_175580	CDS	ACA1_175580	NW_004457702.1	1003548	1006983	D	encoded by transcript ACA1_175580A; uncharacterized protein	join(1003548..1003677,1003771..1004357,1004453..1004578,1004716..1005893,1005991..1006789,1006870..1006983)	Acanthamoeba castellanii str. Neff	14925915
ACA1_175590	CDS	ACA1_175590	NW_004457702.1	1007289	1010419	D	encoded by transcript ACA1_175590A; uncharacterized protein	join(1007289..1007436,1007558..1007769,1007923..1007988,1008173..1008248,1008395..1008474,1008658..1008768,1008892..1009061,1009191..1009263,1009407..1009517,1009647..1009855,1009971..1010138,1010230..1010419)	Acanthamoeba castellanii str. Neff	14925916
ACA1_175600	CDS	ACA1_175600	NW_004457702.1	1011872	1013870	R	encoded by transcript ACA1_175600A; uncharacterized protein	complement(join(1011872..1012191,1012343..1012550,1012644..1012757,1012868..1013053,1013131..1013285,1013366..1013624,1013787..1013870))	Acanthamoeba castellanii str. Neff	14925917
ACA1_175610	CDS	ACA1_175610	NW_004457702.1	1014428	1020996	R	encoded by transcript ACA1_175610A; cytosolic regulator of adenylate cyclase	complement(join(1014428..1014622,1014682..1014819,1014926..1015074,1015165..1015305,1015406..1015627,1015729..1015825,1015908..1016084,1016186..1016244,1016355..1016571,1016688..1016829,1016922..1017061,1017157..1017234,1017318..1017455,1017573..1017734,1017864..1017966,1018038..1018153,1018241..1018398,1018499..1018619,1018743..1018850,1018992..1019183,1019299..1019399,1019664..1019752,1019845..1019927,1020080..1020256,1020437..1020608,1020751..1020901,1020990..1020996))	Acanthamoeba castellanii str. Neff	14925918
ACA1_175620	CDS	ACA1_175620	NW_004457702.1	1021454	1024898	D	encoded by transcript ACA1_175620A; IQGAPrelated protein	join(1021454..1022123,1022199..1022320,1022388..1022489,1022574..1023209,1023282..1023536,1023615..1024046,1024119..1024490,1024567..1024689,1024767..1024898)	Acanthamoeba castellanii str. Neff	14925919
ACA1_175630	CDS	ACA1_175630	NW_004457702.1	1025585	1026610	D	encoded by transcript ACA1_175630A; lipase	1025585..1026610	Acanthamoeba castellanii str. Neff	14925920
ACA1_175640	CDS	ACA1_175640	NW_004457702.1	1026705	1028236	R	encoded by transcript ACA1_175640A; alcohol dehydrogenase	complement(join(1026705..1026983,1027063..1027194,1027256..1027390,1027452..1027601,1027690..1027802,1027856..1028009,1028084..1028236))	Acanthamoeba castellanii str. Neff	14925921
ACA1_175650	CDS	ACA1_175650	NW_004457702.1	1028488	1030133	D	encoded by transcript ACA1_175650A; uncharacterized protein	join(1028488..1028604,1028627..1028643,1028730..1029182,1029273..1029580,1029814..1030133)	Acanthamoeba castellanii str. Neff	14925922
ACA1_175660	CDS	ACA1_175660	NW_004457702.1	1030780	1032347	D	encoded by transcript ACA1_175660A; uncharacterized protein	join(1030780..1031688,1031806..1032123,1032216..1032347)	Acanthamoeba castellanii str. Neff	14925923
ACA1_175670	CDS	ACA1_175670	NW_004457702.1	1032420	1032710	D	encoded by transcript ACA1_175670A; uncharacterized protein	1032420..1032710	Acanthamoeba castellanii str. Neff	14925924
ACA1_175690	CDS	ACA1_175690	NW_004457702.1	1036352	1036925	D	encoded by transcript ACA1_175690A; uncharacterized protein	join(1036352..1036435,1036545..1036925)	Acanthamoeba castellanii str. Neff	14925926
ACA1_175700	CDS	ACA1_175700	NW_004457702.1	1037194	1040041	R	encoded by transcript ACA1_175700A; Frizzled/Smoothened family membrane region protein	complement(join(1037194..1037382,1037467..1037598,1037700..1037761,1037968..1038084,1038177..1038331,1038401..1038479,1038551..1038789,1038869..1039094,1039193..1039402,1039454..1039598,1039762..1039830,1039949..1040041))	Acanthamoeba castellanii str. Neff	14925927
ACA1_175710	CDS	ACA1_175710	NW_004457702.1	1040425	1042785	R	encoded by transcript ACA1_175710A; uncharacterized protein	complement(join(1040425..1040643,1040728..1040848,1040892..1041018,1041097..1041187,1041286..1041347,1041416..1041567,1041631..1041709,1041808..1042046,1042137..1042539,1042623..1042785))	Acanthamoeba castellanii str. Neff	14925928
ACA1_175720	CDS	ACA1_175720	NW_004457702.1	1043333	1045369	R	encoded by transcript ACA1_175720A; RNA recognition motif domain containing protein	complement(join(1043333..1043371,1043459..1043569,1043679..1043815,1044029..1044098,1044170..1044234,1044303..1044735,1044818..1045369))	Acanthamoeba castellanii str. Neff	14925929
ACA1_175730	CDS	ACA1_175730	NW_004457702.1	1046454	1046775	R	encoded by transcript ACA1_175730A; uncharacterized protein	complement(join(1046454..1046587,1046610..1046775))	Acanthamoeba castellanii str. Neff	14925930
ACA1_175740	CDS	ACA1_175740	NW_004457702.1	1047595	1049615	D	encoded by transcript ACA1_175740A; uncharacterized protein	join(1047595..1047634,1047698..1047798,1047889..1047962,1048090..1048618,1048697..1048797,1048881..1048959,1049032..1049147,1049219..1049350,1049438..1049615)	Acanthamoeba castellanii str. Neff	14925931
ACA1_175760	CDS	ACA1_175760	NW_004457702.1	1053244	1054261	R	encoded by transcript ACA1_175760A; phosphoglycerate mutase family domain containing protein	complement(join(1053244..1053427,1053545..1053649,1053723..1053836,1053906..1054261))	Acanthamoeba castellanii str. Neff	14925933
ACA1_175770	CDS	ACA1_175770	NW_004457702.1	1055098	1055523	D	encoded by transcript ACA1_175770A; uncharacterized protein	1055098..1055523	Acanthamoeba castellanii str. Neff	14925934
ACA1_175780	CDS	ACA1_175780	NW_004457702.1	1055728	1057167	R	encoded by transcript ACA1_175780A; methyltransferase domain containing protein	complement(join(1055728..1055787,1055871..1055995,1056087..1056184,1056291..1056389,1056462..1056519,1056611..1056626,1056722..1056804,1056876..1056915,1056967..1057167))	Acanthamoeba castellanii str. Neff	14925935
ACA1_175790	CDS	ACA1_175790	NW_004457702.1	1057554	1058469	D	encoded by transcript ACA1_175790A; NADPHdependent FMN reductase domain containing protein	join(1057554..1057944,1058021..1058160,1058272..1058469)	Acanthamoeba castellanii str. Neff	14925936
ACA1_175800	CDS	ACA1_175800	NW_004457702.1	1058851	1061934	R	encoded by transcript ACA1_175800A; uncharacterized protein	complement(join(1058851..1058869,1058897..1059062,1059173..1059238,1059341..1059497,1059604..1059756,1059843..1060013,1060096..1060208,1060309..1060394,1060480..1060855,1060925..1061305,1061495..1061599,1061689..1061776,1061911..1061934))	Acanthamoeba castellanii str. Neff	14925937
ACA1_175810	CDS	ACA1_175810	NW_004457702.1	1062903	1066778	D	encoded by transcript ACA1_175810A; villin headpiece domain containing protein	join(1062903..1063085,1063168..1063288,1063507..1063571,1063669..1065154,1065277..1065413,1065512..1065629,1065724..1065989,1066128..1066315,1066438..1066650,1066739..1066778)	Acanthamoeba castellanii str. Neff	14925938
ACA1_175820	CDS	ACA1_175820	NW_004457702.1	1067355	1069300	R	encoded by transcript ACA1_175820A; Fbox domain/MORN repeat-containing protein	complement(join(1067355..1068389,1068495..1068728,1068848..1069300))	Acanthamoeba castellanii str. Neff	14925939
ACA1_175830	CDS	ACA1_175830	NW_004457702.1	1070304	1071119	R	encoded by transcript ACA1_175830A; mago nashi protein	complement(join(1070304..1070321,1070461..1070586,1070646..1070733,1070818..1070881,1070966..1071119))	Acanthamoeba castellanii str. Neff	14925940
ACA1_175840	CDS	ACA1_175840	NW_004457702.1	1071267	1072344	R	encoded by transcript ACA1_175840A; SFT2 family protein	complement(join(1071267..1071351,1071444..1071502,1071569..1071686,1071751..1071830,1071902..1071955,1072056..1072155,1072220..1072344))	Acanthamoeba castellanii str. Neff	14925941
ACA1_175850	CDS	ACA1_175850	NW_004457702.1	1072786	1074150	R	encoded by transcript ACA1_175850A; prenylcysteine methylesterase, putative	complement(join(1072786..1072997,1073085..1073278,1073382..1073545,1073731..1074150))	Acanthamoeba castellanii str. Neff	14925942
ACA1_175860	CDS	ACA1_175860	NW_004457702.1	1074349	1078306	R	encoded by transcript ACA1_175860A; von Willebrand factor type A domain containing protein	complement(join(1074349..1075058,1075144..1075205,1075344..1075560,1075640..1075849,1075929..1076048,1076186..1076262,1076341..1076452,1076566..1076817,1076910..1077008,1077091..1077326,1077408..1077628,1077718..1077782,1077910..1078306))	Acanthamoeba castellanii str. Neff	14925943
ACA1_175870	CDS	ACA1_175870	NW_004457702.1	1078688	1081010	R	encoded by transcript ACA1_175870A; zinc finger, C3HC4 type (RING finger) domain containing protein	complement(join(1078688..1078813,1078895..1079805,1079896..1079976,1080059..1080203,1080318..1080567,1080667..1080714,1080850..1081010))	Acanthamoeba castellanii str. Neff	14925944
ACA1_175880	CDS	ACA1_175880	NW_004457702.1	1082070	1082384	D	encoded by transcript ACA1_175880A; uncharacterized protein	1082070..1082384	Acanthamoeba castellanii str. Neff	14925945
ACA1_175890	CDS	ACA1_175890	NW_004457702.1	1082469	1083294	R	encoded by transcript ACA1_175890A; haloacid dehalogenaselike hydrolase domain containing protein	complement(join(1082469..1082869,1082940..1083135,1083205..1083294))	Acanthamoeba castellanii str. Neff	14925946
ACA1_175900	CDS	ACA1_175900	NW_004457702.1	1083487	1084658	D	encoded by transcript ACA1_175900A; tetratricopeptide repeat domain containing protein	join(1083487..1083656,1083785..1083935,1084020..1084108,1084203..1084374,1084458..1084658)	Acanthamoeba castellanii str. Neff	14925947
ACA1_175910	CDS	ACA1_175910	NW_004457702.1	1085170	1087177	D	encoded by transcript ACA1_175910A; eukaryotic translation elongation factor 2, like, putative	join(<1085170..1085299,1085379..1085524,1085615..1085824,1085931..1086329,1086441..1086924,1087017..1087177)	Acanthamoeba castellanii str. Neff	14925948
ACA1_175920	CDS	ACA1_175920	NW_004457702.1	1087319	1088805	D	encoded by transcript ACA1_175920A; Ras subfamily protein	join(1087319..1087403,1087628..1087692,1087711..1087786,1088116..1088201,1088293..1088805)	Acanthamoeba castellanii str. Neff	14925949
ACA1_175930	CDS	ACA1_175930	NW_004457702.1	1089072	1089879	D	encoded by transcript ACA1_175930A; uncharacterized protein	join(1089072..1089342,1089419..1089879)	Acanthamoeba castellanii str. Neff	14925950
ACA1_175940	CDS	ACA1_175940	NW_004457702.1	1090661	1093516	R	encoded by transcript ACA1_175940A; uncharacterized protein	complement(join(1090661..1090831,1090905..1090973,1091084..1091147,1091508..1091605,1091689..1092561,1092740..1093168,1093379..1093516))	Acanthamoeba castellanii str. Neff	14925951
ACA1_175960	CDS	ACA1_175960	NW_004457702.1	1095570	1095935	R	encoded by transcript ACA1_175960A; uncharacterized protein	complement(1095570..1095935)	Acanthamoeba castellanii str. Neff	14925953
ACA1_175970	CDS	ACA1_175970	NW_004457702.1	1096108	1097247	R	encoded by transcript ACA1_175970A; methyltransferase domain containing protein	complement(join(1096108..1096454,1096542..1096889,1097082..1097247))	Acanthamoeba castellanii str. Neff	14925954
ACA1_175980	CDS	ACA1_175980	NW_004457702.1	1097339	1098308	D	encoded by transcript ACA1_175980A; component of TRAPP complex, putative	join(1097339..1097437,1097528..1097616,1097731..1097915,1097985..1098106,1098207..1098308)	Acanthamoeba castellanii str. Neff	14925955
ACA1_175990	CDS	ACA1_175990	NW_004457702.1	1098859	1100109	D	encoded by transcript ACA1_175990A; uncharacterized protein	join(1098859..1099722,1099792..1100109)	Acanthamoeba castellanii str. Neff	14925956
ACA1_176000	CDS	ACA1_176000	NW_004457702.1	1100297	1101865	R	encoded by transcript ACA1_176000A; hydrolase, carbonnitrogen superfamily protein	complement(join(1100297..1100444,1100516..1100598,1100685..1100812,1100905..1100934,1101115..1101194,1101274..1101419,1101463..1101582,1101667..1101789,1101836..1101865))	Acanthamoeba castellanii str. Neff	14925957
ACA1_176010	CDS	ACA1_176010	NW_004457702.1	1102001	1105074	R	encoded by transcript ACA1_176010A; elongation factor 2, putative	complement(join(1102001..1102161,1102266..1102794,1102925..1103257,1103461..1103676,1103745..1103789,1103805..1103905,1103986..1104115,1104192..1104426,1104508..1104630,1104697..1104842,1104904..1105074))	Acanthamoeba castellanii str. Neff	14925958
ACA1_176020	CDS	ACA1_176020	NW_004457702.1	1105607	1107269	R	encoded by transcript ACA1_176020A; CAAX amino terminal protease family protein	complement(join(1105607..1105623,1105782..1105944,1106100..1106196,1106293..1106492,1106579..1106669,1106744..1106866,1106960..1107072,1107111..1107269))	Acanthamoeba castellanii str. Neff	14925959
ACA1_176030	CDS	ACA1_176030	NW_004457702.1	1107631	1111052	R	encoded by transcript ACA1_176030A; ATPase, AAA domain containing protein	complement(join(1107631..1107735,1107830..1107919,1107993..1108094,1108184..1108255,1108333..1108424,1108511..1108694,1108789..1108914,1108998..1109151,1109223..1109438,1109562..1109725,1109810..1110009,1110076..1110484,1110553..1110789,1110906..1111052))	Acanthamoeba castellanii str. Neff	14925960
ACA1_176040	CDS	ACA1_176040	NW_004457702.1	1111745	1112710	D	encoded by transcript ACA1_176040A; zinc knuckle domain containing protein	join(1111745..1111849,1111934..1112167,1112258..1112710)	Acanthamoeba castellanii str. Neff	14925961
ACA1_176050	CDS	ACA1_176050	NW_004457702.1	1112924	1115495	R	encoded by transcript ACA1_176050A; Poly(ADPribose) polymerase catalytic domain containing protein	complement(join(1112924..1113531,1113599..1113757,1113832..1114002,1114064..1114231,1114293..1114548,1114578..1114765,1114776..1115030,1115111..1115495))	Acanthamoeba castellanii str. Neff	14925962
ACA1_176060	CDS	ACA1_176060	NW_004457702.1	1115659	1118579	D	encoded by transcript ACA1_176060A; diacylglycerol kinase catalytic domain containing protein	join(1115659..1116148,1116435..1116541,1116623..1116941,1117029..1117130,1117250..1117393,1117481..1117535,1117606..1118135,1118226..1118330,1118413..1118579)	Acanthamoeba castellanii str. Neff	14925963
ACA1_176070	CDS	ACA1_176070	NW_004457702.1	1118673	1120209	D	encoded by transcript ACA1_176070A; uncharacterized protein	join(1118673..1118796,1118874..1119068,1119136..1119204,1119307..1119936,1120055..1120209)	Acanthamoeba castellanii str. Neff	14925964
ACA1_176080	CDS	ACA1_176080	NW_004457702.1	1120405	1123001	D	encoded by transcript ACA1_176080A; leucine rich repeat domain containing protein	join(1120405..1120458,1120492..1120597,1120670..1120873,1120967..1121120,1121202..1121425,1121505..1121598,1121658..1121808,1121894..1122029,1122122..1122348,1122366..1123001)	Acanthamoeba castellanii str. Neff	14925965
ACA1_176090	CDS	ACA1_176090	NW_004457702.1	1123091	1125027	R	encoded by transcript ACA1_176090A; Sel1 repeatcontaining protein	complement(join(1123091..1123343,1123420..1123704,1123792..1123892,1124033..1124218,1124361..1124656,1124841..1125027))	Acanthamoeba castellanii str. Neff	14925966
ACA1_176100	CDS	ACA1_176100	NW_004457702.1	1125308	1125820	R	encoded by transcript ACA1_176100A; uncharacterized protein	complement(join(1125308..1125571,1125644..1125820))	Acanthamoeba castellanii str. Neff	14925967
ACA1_176110	CDS	ACA1_176110	NW_004457702.1	1126161	1126689	R	encoded by transcript ACA1_176110A; p19 protein	complement(join(1126161..1126337,1126399..1126689))	Acanthamoeba castellanii str. Neff	14925968
ACA1_176120	CDS	ACA1_176120	NW_004457702.1	1126913	1127665	D	encoded by transcript ACA1_176120A; armadillo repeat containing 7 isoform 1 family protein	join(1126913..1127027,1127093..1127266,1127348..1127485,1127553..1127665)	Acanthamoeba castellanii str. Neff	14925969
ACA1_176130	CDS	ACA1_176130	NW_004457702.1	1127897	1131013	D	encoded by transcript ACA1_176130A; protein kinase domain containing protein	join(1127897..1128368,1128506..1128689,1128787..1128869,1128941..1129033,1129397..1129561,1129657..1129839,1129916..1130007,1130095..1130452,1130600..1130679,1130840..1131013)	Acanthamoeba castellanii str. Neff	14925970
ACA1_176140	CDS	ACA1_176140	NW_004457702.1	1131177	1132872	D	encoded by transcript ACA1_176140A; PH domain containing protein	join(1131177..1131218,1131314..1131400,1131523..1131684,1131771..1132000,1132126..1132483,1132576..1132872)	Acanthamoeba castellanii str. Neff	14925971
ACA1_176150	CDS	ACA1_176150	NW_004457702.1	1133017	1135220	D	encoded by transcript ACA1_176150A; PhytanoylCoA dioxygenase (PhyH) superfamily protein	join(1133017..1133033,1133124..1133272,1133396..1133493,1133618..1133755,1133897..1134027,1134114..1134227,1134303..1134379,1134460..1134623,1134761..1134872,1134956..1135023,1135116..1135220)	Acanthamoeba castellanii str. Neff	14925972
ACA1_176160	CDS	ACA1_176160	NW_004457702.1	1135360	1137457	R	encoded by transcript ACA1_176160A; elongation factor1 alpha, putative	complement(join(1135360..1135558,1135673..1135782,1135874..1135985,1136074..1136209,1136286..1136411,1136499..1136593,1136666..1136804,1137032..1137106,1137427..1137457))	Acanthamoeba castellanii str. Neff	14925973
ACA1_176170	CDS	ACA1_176170	NW_004457702.1	1138105	1139858	D	encoded by transcript ACA1_176170A; Bicoidinteracting protein 3 (Bin3)	join(1138105..1138330,1138408..1138585,1138708..1138823,1138893..1139229,1139312..1139400,1139518..1139858)	Acanthamoeba castellanii str. Neff	14925974
ACA1_176180	CDS	ACA1_176180	NW_004457702.1	1140506	1142333	D	encoded by transcript ACA1_176180A; transporter, major facilitator superfamily superfamily protein	join(1140506..1140615,1140689..1140797,1140886..1141959,1142037..1142333)	Acanthamoeba castellanii str. Neff	14925975
ACA1_176190	CDS	ACA1_176190	NW_004457702.1	1142757	1143179	D	encoded by transcript ACA1_176190A; uncharacterized protein	join(1142757..1142843,1142914..1143010,1143097..>1143179)	Acanthamoeba castellanii str. Neff	14925976
ACA1_176300	CDS	ACA1_176300	NW_004457702.1	1149948	1150473	D	encoded by transcript ACA1_176300A; uncharacterized protein	join(1149948..1150032,1150115..>1150473)	Acanthamoeba castellanii str. Neff	14925977
ACA1_176410	CDS	ACA1_176410	NW_004457702.1	1154928	1155322	D	encoded by transcript ACA1_176410A; uncharacterized protein	join(1154928..1155008,1155027..1155162,1155276..>1155322)	Acanthamoeba castellanii str. Neff	14925978
ACA1_302290	CDS	ACA1_302290	NW_004457701.1	194	544	R	encoded by transcript ACA1_302290A; uncharacterized protein	complement(join(194..226,368..544))	Acanthamoeba castellanii str. Neff	14925553
ACA1_302400	CDS	ACA1_302400	NW_004457701.1	1727	3536	R	encoded by transcript ACA1_302400A; acylCoA dehydrogenase domain containing protein	complement(join(<1727..1877,1953..2176,2302..2414,2545..2671,2784..2912,3003..3177,3268..3369,3441..>3536))	Acanthamoeba castellanii str. Neff	14925554
ACA1_326070	CDS	ACA1_326070	NW_004457700.1	12823	15733	D	encoded by transcript ACA1_326070A; peptidase, S8/S53 subfamily protein	join(12823..12894,13050..13184,13266..13346,13524..14054,14161..14359,14440..14499,14580..14711,14778..14836,14952..15034,15149..15239,15370..15456,15578..15733)	Acanthamoeba castellanii str. Neff	14925552
ACA1_326080	CDS	ACA1_326080	NW_004457700.1	16353	17954	D	encoded by transcript ACA1_326080A; encystation-mediating serine proteinase	join(16353..16480,16565..16673,16791..16888,16976..17138,17249..17405,17485..17954)	Acanthamoeba castellanii str. Neff	14925540
ACA1_326090	CDS	ACA1_326090	NW_004457700.1	18085	20254	R	encoded by transcript ACA1_326090A; uncharacterized protein	complement(join(18085..18335,18444..18651,18765..18824,18915..18968,19211..19352,19455..19588,19713..19808,19934..20254))	Acanthamoeba castellanii str. Neff	14925532
ACA1_326110	CDS	ACA1_326110	NW_004457700.1	25077	26237	D	encoded by transcript ACA1_326110A; alcohol dehydrogenase GroESlike domain containing protein	25077..26237	Acanthamoeba castellanii str. Neff	14925534
ACA1_326120	CDS	ACA1_326120	NW_004457700.1	27347	30401	D	encoded by transcript ACA1_326120A; glycogen synthase Gsy1, putative	join(27347..27680,27762..27883,27996..28153,28272..28384,28486..28884,28971..29102,29209..29289,29447..29514,29638..29745,29834..29977,30078..30401)	Acanthamoeba castellanii str. Neff	14925535
ACA1_326130	CDS	ACA1_326130	NW_004457700.1	31160	32045	D	encoded by transcript ACA1_326130A; Ras subfamily protein	join(31160..31192,31281..31377,31472..31599,31709..31815,31919..32045)	Acanthamoeba castellanii str. Neff	14925536
ACA1_326140	CDS	ACA1_326140	NW_004457700.1	32804	33223	D	encoded by transcript ACA1_326140A; ferric reductaselike protein	32804..33223	Acanthamoeba castellanii str. Neff	14925537
ACA1_326150	CDS	ACA1_326150	NW_004457700.1	33758	38642	D	encoded by transcript ACA1_326150A; phosphatidylinositol 3- and 4-kinase	join(33758..33853,34092..34191,34427..34538,34649..34803,34888..34986,35103..35185,35383..35445,35590..35669,35772..35830,35954..36200,36290..36618,36689..36979,37052..37147,37219..37268,37375..37445,37527..37650,37758..37864,37944..38061,38173..38308,38379..38493,38576..38642)	Acanthamoeba castellanii str. Neff	14925538
ACA1_326160	CDS	ACA1_326160	NW_004457700.1	40720	42130	R	encoded by transcript ACA1_326160A; ArsC subfamily protein	complement(join(40720..41253,41369..41428,41522..42130))	Acanthamoeba castellanii str. Neff	14925539
ACA1_326170	CDS	ACA1_326170	NW_004457700.1	43724	47268	D	encoded by transcript ACA1_326170A; SAM domain (Sterile alpha motif) domain containing protein	join(43724..43805,43968..44138,44382..44456,44598..44750,44855..44925,45117..45178,45257..45432,45569..45661,45875..45990,46148..46208,46290..46457,46582..46666,46779..47268)	Acanthamoeba castellanii str. Neff	14925541
ACA1_326180	CDS	ACA1_326180	NW_004457700.1	48186	48833	D	encoded by transcript ACA1_326180A; eukaryotic translation initiation factor 5a-2, putative	join(48186..48264,48354..48523,48627..48833)	Acanthamoeba castellanii str. Neff	14925542
ACA1_326190	CDS	ACA1_326190	NW_004457700.1	49364	50783	D	encoded by transcript ACA1_326190A; Fbox domain containing protein	join(49364..49484,49611..49979,50065..50397,50503..50783)	Acanthamoeba castellanii str. Neff	14925543
ACA1_326200	CDS	ACA1_326200	NW_004457700.1	50926	52435	R	encoded by transcript ACA1_326200A; uncharacterized protein	complement(join(50926..51087,51181..51284,51363..51439,51564..51701,51878..51987,52175..52435))	Acanthamoeba castellanii str. Neff	14925544
ACA1_326210	CDS	ACA1_326210	NW_004457700.1	52803	53498	R	encoded by transcript ACA1_326210A; uncharacterized protein	complement(join(<52803..52880,52893..53245,53333..53498))	Acanthamoeba castellanii str. Neff	14925545
ACA1_326220	CDS	ACA1_326220	NW_004457700.1	53536	55590	R	encoded by transcript ACA1_326220A; Sel1 repeatcontaining protein	complement(join(53536..54122,54195..54449,54537..54624,54742..54892,55002..55090,55151..55286,55418..55590))	Acanthamoeba castellanii str. Neff	14925546
ACA1_326230	CDS	ACA1_326230	NW_004457700.1	55801	58955	D	encoded by transcript ACA1_326230A; peptidylprolyl cis-trans isomerase, cyclophilin-type domain containing protein	join(55801..55852,56092..56255,56384..56462,56546..56609,56712..56854,56982..57119,57240..57768,57877..57966,58102..58287,58480..58667,58861..58955)	Acanthamoeba castellanii str. Neff	14925547
ACA1_326240	CDS	ACA1_326240	NW_004457700.1	60761	63693	R	encoded by transcript ACA1_326240A; uncharacterized protein	complement(join(60761..60973,61040..61449,61538..61631,61723..61846,61967..62153,62243..62394,62535..62854,62972..63027,63139..63413,63578..63693))	Acanthamoeba castellanii str. Neff	14925548
ACA1_326250	CDS	ACA1_326250	NW_004457700.1	63814	65872	R	encoded by transcript ACA1_326250A; methyltransferase domain containing protein	complement(join(63814..63876,63935..64020,64133..64324,64403..64465,64554..64693,64797..64903,65010..65072,65150..65230,65336..65379,65465..65528,65598..65681,65756..65872))	Acanthamoeba castellanii str. Neff	14925549
ACA1_326260	CDS	ACA1_326260	NW_004457700.1	66189	67011	D	encoded by transcript ACA1_326260A; uncharacterized protein	join(66189..66329,66419..66496,66576..66747,66815..67011)	Acanthamoeba castellanii str. Neff	14925550
ACA1_326270	CDS	ACA1_326270	NW_004457700.1	67148	67843	R	encoded by transcript ACA1_326270A; uncharacterized protein	complement(join(67148..67567,67628..67843))	Acanthamoeba castellanii str. Neff	14925551
ACA1_105360	CDS	ACA1_105360	NW_004457739.1	991	2686	R	encoded by transcript ACA1_105360A; uncharacterized protein	complement(join(991..1126,1142..1196,1301..1432,1506..1665,1690..1769,2090..2339,2414..2686))	Acanthamoeba castellanii str. Neff	14926831
ACA1_105370	CDS	ACA1_105370	NW_004457739.1	3038	3694	R	encoded by transcript ACA1_105370A; uncharacterized protein	complement(join(3038..3564,3580..3694))	Acanthamoeba castellanii str. Neff	14926832
ACA1_105480	CDS	ACA1_105480	NW_004457739.1	4927	5455	R	encoded by transcript ACA1_105480A; uncharacterized protein	complement(join(4927..4965,4985..5455))	Acanthamoeba castellanii str. Neff	14926828
ACA1_105490	CDS	ACA1_105490	NW_004457739.1	5580	6774	R	encoded by transcript ACA1_105490A; hydrolase, TatD family protein	complement(join(5580..5672,5760..5826,5895..5985,6055..6184,6255..6386,6458..6591,6693..6774))	Acanthamoeba castellanii str. Neff	14926829
ACA1_105500	CDS	ACA1_105500	NW_004457739.1	6960	7350	D	encoded by transcript ACA1_105500A; uncharacterized protein	join(6960..6984,7044..7152,7227..7350)	Acanthamoeba castellanii str. Neff	14926830
ACA1_105510	CDS	ACA1_105510	NW_004457739.1	8246	8779	R	encoded by transcript ACA1_105510A; uncharacterized protein	complement(8246..8779)	Acanthamoeba castellanii str. Neff	14926825
ACA1_105620	CDS	ACA1_105620	NW_004457739.1	10885	13116	R	encoded by transcript ACA1_105620A; RNA ligase (ATP), putative	complement(join(10885..11116,11222..11314,11396..11556,11678..11783,11887..11958,12060..12160,12230..12305,12449..12527,12624..12720,12799..12870,12976..13116))	Acanthamoeba castellanii str. Neff	14926826
ACA1_105630	CDS	ACA1_105630	NW_004457739.1	13944	15081	R	encoded by transcript ACA1_105630A; uncharacterized protein	complement(join(13944..13975,14094..14364,14458..14555,14638..14724,14802..15081))	Acanthamoeba castellanii str. Neff	14926827
ACA1_322330	CDS	ACA1_322330	NW_004457699.1	2819	3124	D	encoded by transcript ACA1_322330A; uncharacterized protein	join(2819..2921,2985..3124)	Acanthamoeba castellanii str. Neff	14925531
ACA1_322340	CDS	ACA1_322340	NW_004457699.1	4296	5030	D	encoded by transcript ACA1_322340A; autophagy protein, putative	join(4296..4505,4527..5030)	Acanthamoeba castellanii str. Neff	14925523
ACA1_322350	CDS	ACA1_322350	NW_004457699.1	6714	7292	R	encoded by transcript ACA1_322350A; uncharacterized protein	complement(join(6714..6989,7149..7292))	Acanthamoeba castellanii str. Neff	14925524
ACA1_322360	CDS	ACA1_322360	NW_004457699.1	7373	7753	R	encoded by transcript ACA1_322360A; uncharacterized protein	complement(join(7373..7543,7601..7753))	Acanthamoeba castellanii str. Neff	14925525
ACA1_322370	CDS	ACA1_322370	NW_004457699.1	8655	9709	D	encoded by transcript ACA1_322370A; cathepsin L 2 precursor, putative	join(8655..9066,9126..9709)	Acanthamoeba castellanii str. Neff	14925526
ACA1_322380	CDS	ACA1_322380	NW_004457699.1	10439	12133	R	encoded by transcript ACA1_322380A; uncharacterized protein	complement(join(10439..10543,10620..10736,10817..11695,11774..12133))	Acanthamoeba castellanii str. Neff	14925527
ACA1_322390	CDS	ACA1_322390	NW_004457699.1	12943	18499	D	encoded by transcript ACA1_322390A; DIL domain containing protein	join(12943..13116,13282..13422,13579..13649,13751..13841,13934..13986,14097..14205,14336..14987,15100..15287,15391..15682,15810..15901,16070..16181,16282..16424,16545..16598,16721..17145,17240..17524,17595..17741,17839..17898,17986..18499)	Acanthamoeba castellanii str. Neff	14925522
ACA1_322400	CDS	ACA1_322400	NW_004457699.1	18448	20137	R	encoded by transcript ACA1_322400A; zinc finger, C3HC4 type (RING finger) domain containing protein	complement(join(18448..18456,18722..18900,19009..19292,19386..19446,19600..19772,19995..20064,20119..20137))	Acanthamoeba castellanii str. Neff	14925528
ACA1_322410	CDS	ACA1_322410	NW_004457699.1	20331	21899	R	encoded by transcript ACA1_322410A; K+ channel tetramerization subfamily protein	complement(join(20331..20431,20590..20634,20782..20876,20992..21150,21307..21431,21515..21577,21689..21752,21844..21899))	Acanthamoeba castellanii str. Neff	14925529
ACA1_322420	CDS	ACA1_322420	NW_004457699.1	22147	23989	R	encoded by transcript ACA1_322420A; uncharacterized protein	complement(join(22147..22494,22593..22720,22834..22945,23119..23207,23302..23359,23431..23517,23590..23733,23816..23856,23956..23989))	Acanthamoeba castellanii str. Neff	14925530
ACA1_032430	CDS	ACA1_032430	NW_004457698.1	102	10498	D	encoded by transcript ACA1_032430A; exocyst complex component 6, putative	join(<102..261,372..487,655..783,856..1092,1187..1293,1384..1510,1607..1821,1866..1997,5199..5281,5362..5562,5630..5824,5896..5998,6376..6535,6602..7448,7528..7649,7732..8053,8170..8715,9553..9587,9697..10454,10483..10498)	Acanthamoeba castellanii str. Neff	14925520
ACA1_032840	CDS	ACA1_032840	NW_004457698.1	11010	14992	D	encoded by transcript ACA1_032840A; uncharacterized protein	join(11010..11420,11521..11769,13435..13625,13698..13938,14384..14490,14585..14767,14848..>14992)	Acanthamoeba castellanii str. Neff	14925521
ACA1_005830	CDS	ACA1_005830	NW_004457697.1	13621	15483	R	encoded by transcript ACA1_005830A; Ser/Thr phosphatase, putative	complement(join(<13621..13761,13866..14007,14090..14242,14320..14443,14541..14689,14782..14917,15045..>15483))	Acanthamoeba castellanii str. Neff	14925519
ACA1_006060	CDS	ACA1_006060	NW_004457697.1	25106	26434	D	encoded by transcript ACA1_006060A; uncharacterized protein	join(25106..25138,25221..25379,25464..25532,25680..25788,25878..26434)	Acanthamoeba castellanii str. Neff	14925497
ACA1_006070	CDS	ACA1_006070	NW_004457697.1	26616	27750	R	encoded by transcript ACA1_006070A; uncharacterized protein	complement(join(26616..26941,27087..27227,27307..27402,27522..27750))	Acanthamoeba castellanii str. Neff	14925498
ACA1_006080	CDS	ACA1_006080	NW_004457697.1	27918	31283	R	encoded by transcript ACA1_006080A; uncharacterized protein	complement(join(27918..28915,29036..29131,29361..29438,29689..29763,29835..29930,30198..30275,30369..30422,30524..30601,30716..30828,30963..31044,31229..31283))	Acanthamoeba castellanii str. Neff	14925499
ACA1_006100	CDS	ACA1_006100	NW_004457697.1	40495	42683	D	encoded by transcript ACA1_006100A; asparagine-linked glycosylase, putative	join(40495..40587,40691..40755,40822..41197,41300..41426,41501..41617,41708..41924,41995..42137,42250..42683)	Acanthamoeba castellanii str. Neff	14925501
ACA1_006110	CDS	ACA1_006110	NW_004457697.1	43133	44052	D	encoded by transcript ACA1_006110A; AIG2 family protein	join(43133..43274,43521..43654,43759..44052)	Acanthamoeba castellanii str. Neff	14925502
ACA1_006120	CDS	ACA1_006120	NW_004457697.1	44346	47667	D	encoded by transcript ACA1_006120A; Ankyrin repeat containing protein	join(44346..45245,45362..45480,45577..45760,45841..46352,46438..46511,46589..46708,46812..46984,47062..47667)	Acanthamoeba castellanii str. Neff	14925503
ACA1_006130	CDS	ACA1_006130	NW_004457697.1	48151	56117	D	encoded by transcript ACA1_006130A; Tyrosine kinase, putative	join(48151..48375,48935..49066,49162..49221,49321..49420,49556..49885,50001..51491,51613..51690,52198..52346,52467..53813,53924..54479,54600..54967,55038..55099,55226..55476,55561..55702,55811..56117)	Acanthamoeba castellanii str. Neff	14925504
ACA1_006140	CDS	ACA1_006140	NW_004457697.1	56534	58091	D	encoded by transcript ACA1_006140A; BTB/POZ domain containing protein	join(56534..56849,56923..57134,57200..57415,57524..57725,57823..57892,57986..58091)	Acanthamoeba castellanii str. Neff	14925505
ACA1_006150	CDS	ACA1_006150	NW_004457697.1	58292	59664	D	encoded by transcript ACA1_006150A; PH domain containing protein	join(58292..58423,58529..58607,58741..58853,58934..59112,59259..59406,59485..59664)	Acanthamoeba castellanii str. Neff	14925506
ACA1_006160	CDS	ACA1_006160	NW_004457697.1	59907	60738	D	encoded by transcript ACA1_006160A; uncharacterized protein	join(59907..60104,60119..60304,60319..60436,60453..60545,60614..60738)	Acanthamoeba castellanii str. Neff	14925507
ACA1_006170	CDS	ACA1_006170	NW_004457697.1	60773	63726	R	encoded by transcript ACA1_006170A; amino acid transporter family protein	complement(join(60773..60831,60926..61048,61161..61464,61575..61688,61798..61852,61935..62117,62237..62305,62584..62654,62750..62858,62976..63049,63179..63269,63406..63482,63667..63726))	Acanthamoeba castellanii str. Neff	14925508
ACA1_006180	CDS	ACA1_006180	NW_004457697.1	63997	66322	R	encoded by transcript ACA1_006180A; Multicopper oxidase, type 2	complement(join(63997..64179,64266..64567,64644..64692,64726..64793,64864..64917,64983..65136,65203..65373,65465..65571,65657..65866,65942..66068,66086..66322))	Acanthamoeba castellanii str. Neff	14925509
ACA1_006190	CDS	ACA1_006190	NW_004457697.1	67507	67915	R	encoded by transcript ACA1_006190A; uncharacterized protein	complement(join(67507..67656,67746..67807,67861..67915))	Acanthamoeba castellanii str. Neff	14925510
ACA1_006200	CDS	ACA1_006200	NW_004457697.1	68133	70067	R	encoded by transcript ACA1_006200A; uncharacterized protein	complement(join(68133..68138,68236..68348,68437..68588,68654..68776,68818..68953,69041..69118,69194..69352,69432..69521,69728..70067))	Acanthamoeba castellanii str. Neff	14925511
ACA1_006210	CDS	ACA1_006210	NW_004457697.1	70454	71014	R	encoded by transcript ACA1_006210A; uncharacterized protein	complement(70454..71014)	Acanthamoeba castellanii str. Neff	14925512
ACA1_006220	CDS	ACA1_006220	NW_004457697.1	71711	73249	D	encoded by transcript ACA1_006220A; FADdependent monooxygenase	71711..73249	Acanthamoeba castellanii str. Neff	14925513
ACA1_006230	CDS	ACA1_006230	NW_004457697.1	73350	75288	R	encoded by transcript ACA1_006230A; NOL1/NOP2/sun domain containing protein	complement(join(73350..73612,73690..73780,73873..73989,74066..74574,74683..74773,74875..74890,74987..75288))	Acanthamoeba castellanii str. Neff	14925514
ACA1_006240	CDS	ACA1_006240	NW_004457697.1	75392	76269	D	encoded by transcript ACA1_006240A; RNA polymerase II subunit A Cterminal domain phosphatase SSU72, putative	join(75392..75630,75704..75846,75920..76038,76168..76269)	Acanthamoeba castellanii str. Neff	14925515
ACA1_006250	CDS	ACA1_006250	NW_004457697.1	76684	78460	R	encoded by transcript ACA1_006250A; Serine/threonine kinase	complement(join(76684..77820,77879..78079,78150..78180,78258..78460))	Acanthamoeba castellanii str. Neff	14925516
ACA1_006260	CDS	ACA1_006260	NW_004457697.1	78871	79429	D	encoded by transcript ACA1_006260A; uncharacterized protein	join(78871..79287,79409..79429)	Acanthamoeba castellanii str. Neff	14925517
ACA1_006270	CDS	ACA1_006270	NW_004457697.1	79567	82339	R	encoded by transcript ACA1_006270A; uncharacterized protein	complement(join(79567..81363,81482..81563,81706..81814,81925..82013,82095..82339))	Acanthamoeba castellanii str. Neff	14925518
ACA1_345560	CDS	ACA1_345560	NW_004457696.1	40	1874	D	encoded by transcript ACA1_345560A; uncharacterized protein	join(<40..696,1267..1515,1647..1874)	Acanthamoeba castellanii str. Neff	14925493
ACA1_345670	CDS	ACA1_345670	NW_004457696.1	1955	2810	R	encoded by transcript ACA1_345670A; uncharacterized protein	complement(join(1955..2098,2173..2265,2418..2810))	Acanthamoeba castellanii str. Neff	14925485
ACA1_345680	CDS	ACA1_345680	NW_004457696.1	3033	8779	D	encoded by transcript ACA1_345680A; DIL domain containing protein	join(3033..3341,5806..6199,6280..6440,6509..6571,6628..6939,7187..7333,7597..7651,7739..7843,7954..8111,8206..8315,8422..8568,8659..8779)	Acanthamoeba castellanii str. Neff	14925494
ACA1_345890	CDS	ACA1_345890	NW_004457696.1	9275	9840	D	encoded by transcript ACA1_345890A; uncharacterized protein	join(9275..9496,9614..9720,9816..9840)	Acanthamoeba castellanii str. Neff	14925486
ACA1_345900	CDS	ACA1_345900	NW_004457696.1	9919	10360	R	encoded by transcript ACA1_345900A; uncharacterized protein	complement(join(9919..10038,10118..10360))	Acanthamoeba castellanii str. Neff	14925487
ACA1_346010	CDS	ACA1_346010	NW_004457696.1	12779	13739	R	encoded by transcript ACA1_346010A; activating signal cointegrator 1, putative	complement(join(<12779..12921,13017..13234,13276..13463,13572..13739))	Acanthamoeba castellanii str. Neff	14925488
ACA1_346020	CDS	ACA1_346020	NW_004457696.1	13889	14404	D	encoded by transcript ACA1_346020A; uncharacterized protein	13889..14404	Acanthamoeba castellanii str. Neff	14925489
ACA1_346030	CDS	ACA1_346030	NW_004457696.1	14493	14978	R	encoded by transcript ACA1_346030A; CHCH domain containing protein	complement(14493..14978)	Acanthamoeba castellanii str. Neff	14925490
ACA1_346040	CDS	ACA1_346040	NW_004457696.1	15462	16297	D	encoded by transcript ACA1_346040A; rasrelated protein Rab-7, putative	join(15462..15654,15793..15872,15927..16138,16222..16297)	Acanthamoeba castellanii str. Neff	14925491
ACA1_346150	CDS	ACA1_346150	NW_004457696.1	23443	23990	R	encoded by transcript ACA1_346150A; histidine triad domain containing protein	complement(join(23443..23639,23705..23812,23880..>23990))	Acanthamoeba castellanii str. Neff	14925492
ACA1_333040	CDS	ACA1_333040	NW_004457693.1	181	2759	D	encoded by transcript ACA1_333040A; Ubox domain containing protein	join(181..304,338..423,546..642,735..805,900..973,1063..1157,1216..1376,1471..1600,1684..1724,1807..1932,2061..2759)	Acanthamoeba castellanii str. Neff	14925484
ACA1_333150	CDS	ACA1_333150	NW_004457693.1	5691	6297	D	encoded by transcript ACA1_333150A; uncharacterized protein	join(5691..5868,5899..6004,6114..6297)	Acanthamoeba castellanii str. Neff	14925458
ACA1_333160	CDS	ACA1_333160	NW_004457693.1	8043	8377	D	encoded by transcript ACA1_333160A; uncharacterized protein	join(8043..8201,8309..8377)	Acanthamoeba castellanii str. Neff	14925459
ACA1_333170	CDS	ACA1_333170	NW_004457693.1	8534	11099	R	encoded by transcript ACA1_333170A; uncharacterized protein	complement(join(8534..8569,8729..8769,8903..8970,9025..9038,9150..9242,9406..9495,9595..9655,9715..10245,10367..10463,10556..10713,11026..11099))	Acanthamoeba castellanii str. Neff	14925460
ACA1_333180	CDS	ACA1_333180	NW_004457693.1	11364	13544	R	encoded by transcript ACA1_333180A; histidine-tRNA ligase	complement(join(11364..11805,11909..12082,12151..12312,12502..12611,12801..12922,13052..13190,13266..13544))	Acanthamoeba castellanii str. Neff	14925461
ACA1_333190	CDS	ACA1_333190	NW_004457693.1	13704	14444	D	encoded by transcript ACA1_333190A; uncharacterized protein	join(13704..13776,13867..13951,14115..14320,14416..14444)	Acanthamoeba castellanii str. Neff	14925462
ACA1_333200	CDS	ACA1_333200	NW_004457693.1	14620	16245	D	encoded by transcript ACA1_333200A; uncharacterized protein	join(14620..14683,14761..14863,14929..15011,15101..15219,15296..15377,15464..15961,16151..16245)	Acanthamoeba castellanii str. Neff	14925463
ACA1_333210	CDS	ACA1_333210	NW_004457693.1	16482	17721	D	encoded by transcript ACA1_333210A; Factin-capping protein subunit beta, putative	join(16482..16693,16874..16987,17090..17169,17237..17436,17494..17721)	Acanthamoeba castellanii str. Neff	14925464
ACA1_333220	CDS	ACA1_333220	NW_004457693.1	17941	23262	D	encoded by transcript ACA1_333220A; uncharacterized protein	join(17941..18055,18142..18172,18355..18492,18683..18834,18994..19077,19173..19372,19443..19730,19838..19949,20032..20167,20301..20478,20560..20760,20853..21044,21174..21374,21486..21632,21716..21973,22050..22213,22294..22497,22577..22910,22984..23262)	Acanthamoeba castellanii str. Neff	14925465
ACA1_333230	CDS	ACA1_333230	NW_004457693.1	23415	23924	R	encoded by transcript ACA1_333230A; uncharacterized protein	complement(join(23415..23483,23611..23705,23765..23924))	Acanthamoeba castellanii str. Neff	14925466
ACA1_333240	CDS	ACA1_333240	NW_004457693.1	24134	25309	D	encoded by transcript ACA1_333240A; uncharacterized protein	join(24134..24260,24338..24530,24604..24895,24961..25082,25162..25309)	Acanthamoeba castellanii str. Neff	14925467
ACA1_333250	CDS	ACA1_333250	NW_004457693.1	25408	25932	R	encoded by transcript ACA1_333250A; uncharacterized protein	complement(25408..25932)	Acanthamoeba castellanii str. Neff	14925468
ACA1_333260	CDS	ACA1_333260	NW_004457693.1	26146	28509	R	encoded by transcript ACA1_333260A; presenilin subfamily protein	complement(join(26146..26301,26388..26503,26603..26686,26779..26874,26985..27106,27178..27273,27597..27743,27882..27973,28047..28180,28260..>28509))	Acanthamoeba castellanii str. Neff	14925469
ACA1_333270	CDS	ACA1_333270	NW_004457693.1	28607	29627	R	encoded by transcript ACA1_333270A; uncharacterized protein	complement(join(28607..29008,29042..29286,29345..29627))	Acanthamoeba castellanii str. Neff	14925470
ACA1_333280	CDS	ACA1_333280	NW_004457693.1	29943	31500	R	encoded by transcript ACA1_333280A; Gpatch domain containing protein	complement(join(29943..30055,30250..30427,30572..30735,30828..31086,31177..31500))	Acanthamoeba castellanii str. Neff	14925471
ACA1_333290	CDS	ACA1_333290	NW_004457693.1	33343	40191	D	encoded by transcript ACA1_333290A; serine/threonine protein kinase, putative	join(33343..33588,33665..33813,33882..34044,34126..34282,34358..34768,34841..34874,34976..35048,35129..35200,35290..35362,35447..35505,35574..35670,35744..35911,35994..36208,36303..36485,36560..36940,37018..37176,37249..37460,37528..37865,37943..38560,38621..38736,38806..38958,39036..39204,39290..39456,39550..39688,39754..39952,40083..40191)	Acanthamoeba castellanii str. Neff	14925472
ACA1_333300	CDS	ACA1_333300	NW_004457693.1	40747	41742	D	encoded by transcript ACA1_333300A; uncharacterized protein	join(40747..40803,40858..40982,41047..41295,41444..41701,41727..41742)	Acanthamoeba castellanii str. Neff	14925473
ACA1_333310	CDS	ACA1_333310	NW_004457693.1	41984	42729	D	encoded by transcript ACA1_333310A; MAP3K delta1 protein kinase-like, putative	join(41984..42129,42349..42499,42619..42729)	Acanthamoeba castellanii str. Neff	14925474
ACA1_333320	CDS	ACA1_333320	NW_004457693.1	43030	43641	R	encoded by transcript ACA1_333320A; uncharacterized protein	complement(join(43030..43167,43235..43322,43378..43461,43535..43641))	Acanthamoeba castellanii str. Neff	14925475
ACA1_333330	CDS	ACA1_333330	NW_004457693.1	44170	52101	R	encoded by transcript ACA1_333330A; phosphate ABC transporter, phosphatebinding protein PstS, putative	complement(join(44170..44281,44377..44575,44668..44806,44898..45064,45129..45432,45519..45634,45758..46360,46473..46588,46688..46894,47029..47080,47170..47317,47455..47613,47821..47937,48023..48292,48408..48587,48724..48938,49027..49194,49336..49432,49529..49587,49676..49748,49827..49922,50019..50125,50196..50241,50326..50687,50769..50925,51047..51209,51323..51447,51521..51747,51889..51972,52044..52101))	Acanthamoeba castellanii str. Neff	14925476
ACA1_333340	CDS	ACA1_333340	NW_004457693.1	52449	52964	D	encoded by transcript ACA1_333340A; proactivator polypeptide, putative	join(52449..52542,52631..52816,52891..52964)	Acanthamoeba castellanii str. Neff	14925477
ACA1_333350	CDS	ACA1_333350	NW_004457693.1	53016	54122	R	encoded by transcript ACA1_333350A; uroporphyrinogen decarboxylase	complement(join(53016..53232,53359..54122))	Acanthamoeba castellanii str. Neff	14925478
ACA1_333360	CDS	ACA1_333360	NW_004457693.1	54270	59629	R	encoded by transcript ACA1_333360A; integrator complex subunit 3 isoform 1, putative	complement(join(54270..54455,54555..55513,55629..55775,55848..55923,56004..56135,56236..56501,56615..56825,56911..57049,57137..57311,57380..57642,57721..57892,57972..58059,58136..58327,58403..58630,58714..58858,58937..59202,59279..59362,59447..59629))	Acanthamoeba castellanii str. Neff	14925479
ACA1_333370	CDS	ACA1_333370	NW_004457693.1	60017	60906	R	encoded by transcript ACA1_333370A; LIM domain containing protein	complement(join(60017..60408,60480..60906))	Acanthamoeba castellanii str. Neff	14925480
ACA1_333380	CDS	ACA1_333380	NW_004457693.1	60929	63586	R	encoded by transcript ACA1_333380A; DENN (AEX3) domain containing protein	complement(join(60929..61080,61091..61213,61257..61528,61586..61781,61918..62041,62110..62394,62526..62769,62972..63004,63110..63263,63526..63586))	Acanthamoeba castellanii str. Neff	14925481
ACA1_333490	CDS	ACA1_333490	NW_004457693.1	63839	65142	D	encoded by transcript ACA1_333490A; uncharacterized protein	join(63839..63878,64002..64146,64320..64380,64698..64769,64783..64868,64941..65142)	Acanthamoeba castellanii str. Neff	14925482
ACA1_333500	CDS	ACA1_333500	NW_004457693.1	65445	66791	D	encoded by transcript ACA1_333500A; uncharacterized protein	join(65445..65496,66045..66092,66198..66404,66516..66559,66642..>66791)	Acanthamoeba castellanii str. Neff	14925483
ACA1_021580	CDS	ACA1_021580	NW_004457692.1	5988	15252	D	encoded by transcript ACA1_021580A; FGGAP repeat domain containing protein	join(5988..6198,6326..6907,7030..7655,7767..8083,8232..8530,8648..8785,8893..9227,9315..9731,9866..9979,10093..10648,10760..11820,11922..12103,12191..12287,12303..13298,13415..13513,13554..13649,13806..14053,14172..14492,14526..15252)	Acanthamoeba castellanii str. Neff	14925457
ACA1_021590	CDS	ACA1_021590	NW_004457692.1	15852	19844	D	encoded by transcript ACA1_021590A; uncharacterized protein	join(15852..15943,16055..16442,16619..16796,17000..17227,17405..17570,17752..18211,18398..18622,18679..18931,19006..19242,19413..19592,19735..>19844)	Acanthamoeba castellanii str. Neff	14925456
ACA1_007310	CDS	ACA1_007310	NW_004457691.1	13354	14058	D	encoded by transcript ACA1_007310A; uncharacterized protein	join(13354..13407,13476..13537,13629..13758,13831..14058)	Acanthamoeba castellanii str. Neff	14925455
ACA1_038980	CDS	ACA1_038980	NW_004457689.1	11880	12522	R	encoded by transcript ACA1_038980A; palmitoyl protein thioesterase, putative	complement(join(11880..12015,12116..12240,12289..12522))	Acanthamoeba castellanii str. Neff	14925454
ACA1_039190	CDS	ACA1_039190	NW_004457689.1	16409	18457	D	encoded by transcript ACA1_039190A; ankyrin repeat-containing protein	join(<16409..16616,16703..16836,16949..17870,17966..18028,18142..18227,18323..18457)	Acanthamoeba castellanii str. Neff	14925446
ACA1_039200	CDS	ACA1_039200	NW_004457689.1	19418	20369	R	encoded by transcript ACA1_039200A; GATA zinc finger domain containing protein	complement(join(19418..19631,19850..20139,20256..20369))	Acanthamoeba castellanii str. Neff	14925447
ACA1_039210	CDS	ACA1_039210	NW_004457689.1	20754	21823	R	encoded by transcript ACA1_039210A; zincbinding alcohol dehydrogenase	complement(join(20754..20925,21015..21201,21271..21412,21479..21612,21677..21722,21746..21823))	Acanthamoeba castellanii str. Neff	14925440
ACA1_039320	CDS	ACA1_039320	NW_004457689.1	25748	26508	D	encoded by transcript ACA1_039320A; uncharacterized protein	join(25748..25753,25843..26120,26196..26262,26374..26508)	Acanthamoeba castellanii str. Neff	14925441
ACA1_039330	CDS	ACA1_039330	NW_004457689.1	26701	27288	R	encoded by transcript ACA1_039330A; Roadblock/LC7 domain containing protein	complement(join(26701..26751,26820..26909,26986..27127,27221..27288))	Acanthamoeba castellanii str. Neff	14925442
ACA1_039340	CDS	ACA1_039340	NW_004457689.1	27517	30210	R	encoded by transcript ACA1_039340A; uncharacterized protein	complement(join(27517..27618,27697..27927,27997..28052,28244..28254,28343..28476,28546..28601,28724..28793,28902..28955,29071..29189,29259..29314,29395..29504,29635..30210))	Acanthamoeba castellanii str. Neff	14925443
ACA1_039450	CDS	ACA1_039450	NW_004457689.1	30357	32922	R	encoded by transcript ACA1_039450A; SAP domain containing protein	complement(join(30357..30584,30671..30872,30957..31058,31130..31322,31404..31536,31634..31765,31841..31951,32020..32341,32419..32508,32585..32747,32886..32922))	Acanthamoeba castellanii str. Neff	14925444
ACA1_039460	CDS	ACA1_039460	NW_004457689.1	34444	36137	D	encoded by transcript ACA1_039460A; replication factor C (activator 1) 3, putative	join(34444..34485,34568..34594,34669..34834,34900..35018,35095..35157,35245..35381,35471..35569,35655..35724,35799..35873,35963..36042,36104..36137)	Acanthamoeba castellanii str. Neff	14925445
ACA1_039470	CDS	ACA1_039470	NW_004457689.1	36430	37515	D	encoded by transcript ACA1_039470A; uncharacterized protein	join(36430..36552,36625..36843,36914..37150,37220..37267,37330..37515)	Acanthamoeba castellanii str. Neff	14925448
ACA1_039480	CDS	ACA1_039480	NW_004457689.1	38116	38909	D	encoded by transcript ACA1_039480A; uncharacterized protein	join(38116..38190,38261..38458,38525..38707,38769..38909)	Acanthamoeba castellanii str. Neff	14925449
ACA1_039490	CDS	ACA1_039490	NW_004457689.1	40964	41848	D	encoded by transcript ACA1_039490A; YCIIrelated domain containing protein	join(40964..41100,41181..41205,41399..41429,41517..41848)	Acanthamoeba castellanii str. Neff	14925450
ACA1_039500	CDS	ACA1_039500	NW_004457689.1	41910	43210	R	encoded by transcript ACA1_039500A; Amidohydrolase 2, putative	complement(join(41910..42172,42259..42386,42481..42559,42633..42683,42755..42883,42943..43210))	Acanthamoeba castellanii str. Neff	14925451
ACA1_039510	CDS	ACA1_039510	NW_004457689.1	43417	44086	D	encoded by transcript ACA1_039510A; XYPPX repeat-containing protein	join(43417..43773,43871..44086)	Acanthamoeba castellanii str. Neff	14925452
ACA1_039520	CDS	ACA1_039520	NW_004457689.1	44155	46679	R	encoded by transcript ACA1_039520A; uncharacterized protein	complement(join(44155..44494,44594..44706,44769..44890,44966..45008,45091..45267,45339..45495,45600..46148,46165..46265,46331..46473,46544..46679))	Acanthamoeba castellanii str. Neff	14925453
ACA1_056090	CDS	ACA1_056090	NW_004457688.1	81	346	D	encoded by transcript ACA1_056090A; uncharacterized protein	join(81..156,231..346)	Acanthamoeba castellanii str. Neff	14925439
ACA1_056300	CDS	ACA1_056300	NW_004457688.1	5669	6839	R	encoded by transcript ACA1_056300A; uncharacterized protein	complement(join(5669..5796,5904..6195,6355..6388,6562..6839))	Acanthamoeba castellanii str. Neff	14925431
ACA1_056310	CDS	ACA1_056310	NW_004457688.1	7015	8203	R	encoded by transcript ACA1_056310A; uncharacterized protein	complement(join(7015..7353,7453..7639,7717..7852,7945..>8203))	Acanthamoeba castellanii str. Neff	14925432
ACA1_056320	CDS	ACA1_056320	NW_004457688.1	8834	9891	D	encoded by transcript ACA1_056320A; uncharacterized protein	join(8834..9058,9320..9405,9539..9765,9804..9818,9881..9891)	Acanthamoeba castellanii str. Neff	14925433
ACA1_056430	CDS	ACA1_056430	NW_004457688.1	11388	12665	D	encoded by transcript ACA1_056430A; bromodomain domain containing protein	join(11388..11959,11970..12024,12151..12285,12393..12489,12529..12665)	Acanthamoeba castellanii str. Neff	14925434
ACA1_056540	CDS	ACA1_056540	NW_004457688.1	15094	15827	D	encoded by transcript ACA1_056540A; uncharacterized protein	join(15094..15291,15389..15563,15661..15827)	Acanthamoeba castellanii str. Neff	14925435
ACA1_056550	CDS	ACA1_056550	NW_004457688.1	16974	18357	R	encoded by transcript ACA1_056550A; uncharacterized protein	complement(join(16974..17344,17407..17522,17908..17971,18165..18357))	Acanthamoeba castellanii str. Neff	14925436
ACA1_056560	CDS	ACA1_056560	NW_004457688.1	18565	19080	D	encoded by transcript ACA1_056560A; uncharacterized protein	join(18565..18762,18883..19080)	Acanthamoeba castellanii str. Neff	14925437
ACA1_056670	CDS	ACA1_056670	NW_004457688.1	24967	25836	R	encoded by transcript ACA1_056670A; cathepsin Llike cysteine protease	complement(join(24967..25104,25188..25322,25473..25677,25799..25836))	Acanthamoeba castellanii str. Neff	14925438
ACA1_017200	CDS	ACA1_017200	NW_004457687.1	4704	6402	R	encoded by transcript ACA1_017200A; uncharacterized protein	complement(join(<4704..5151,5243..5332,5406..5501,5589..5752,5815..5873,5960..6092,6163..6244,6313..>6402))	Acanthamoeba castellanii str. Neff	14925429
ACA1_017310	CDS	ACA1_017310	NW_004457687.1	9493	9831	R	encoded by transcript ACA1_017310A; uncharacterized protein	complement(<9493..9831)	Acanthamoeba castellanii str. Neff	14925430
ACA1_017320	CDS	ACA1_017320	NW_004457687.1	10690	11114	R	encoded by transcript ACA1_017320A; uncharacterized protein	complement(join(10690..10850,10979..11114))	Acanthamoeba castellanii str. Neff	14925427
ACA1_017330	CDS	ACA1_017330	NW_004457687.1	11438	11782	R	encoded by transcript ACA1_017330A; sphingosine kinase, putative	complement(11438..>11782)	Acanthamoeba castellanii str. Neff	14925428
ACA1_312480	CDS	ACA1_312480	NW_004457686.1	5001	5669	R	encoded by transcript ACA1_312480A; uncharacterized protein	complement(join(<5001..5147,5234..5350,5418..5528,5613..5669))	Acanthamoeba castellanii str. Neff	14925426
ACA1_085710	CDS	ACA1_085710	NW_004457685.1	280	901	R	encoded by transcript ACA1_085710A; uncharacterized protein	complement(join(280..413,550..628,743..901))	Acanthamoeba castellanii str. Neff	14925425
ACA1_085820	CDS	ACA1_085820	NW_004457685.1	6208	7232	R	encoded by transcript ACA1_085820A; SNF1related protein kinase	complement(join(6208..6683,6824..7232))	Acanthamoeba castellanii str. Neff	14925414
ACA1_085930	CDS	ACA1_085930	NW_004457685.1	11046	13139	R	encoded by transcript ACA1_085930A; lin-10, putative	complement(join(<11046..11427,11523..11627,11755..11924,12095..12342,12419..12473,12570..12818,12924..13006,13088..13139))	Acanthamoeba castellanii str. Neff	14925415
ACA1_085940	CDS	ACA1_085940	NW_004457685.1	13396	14951	R	encoded by transcript ACA1_085940A; protease	complement(join(13396..13493,13593..13685,13765..13827,13928..13999,14083..14194,14261..14431,14512..14568,14742..14951))	Acanthamoeba castellanii str. Neff	14925416
ACA1_085950	CDS	ACA1_085950	NW_004457685.1	15064	16396	D	encoded by transcript ACA1_085950A; formylCoA transferase	join(15064..15253,15369..15463,15601..15673,15832..15956,16087..16234,16329..>16396)	Acanthamoeba castellanii str. Neff	14925417
ACA1_086060	CDS	ACA1_086060	NW_004457685.1	19812	20806	R	encoded by transcript ACA1_086060A; Fbox domain containing protein	complement(join(19812..20004,20162..20364,20418..20612,20678..>20806))	Acanthamoeba castellanii str. Neff	14925418
ACA1_086070	CDS	ACA1_086070	NW_004457685.1	21314	28196	R	encoded by transcript ACA1_086070A; serine/threonine kinase	complement(join(21314..21556,21641..21814,21899..22107,22184..22352,22447..22601,22653..22754,22833..23305,23383..23610,23701..23829,23908..23971,25021..25271,25368..25512,25581..25743,25813..25896,26005..26370,26480..26569,26789..26984,27052..27449,27667..28007,28133..28196))	Acanthamoeba castellanii str. Neff	14925419
ACA1_086180	CDS	ACA1_086180	NW_004457685.1	28664	30160	D	encoded by transcript ACA1_086180A; uncharacterized protein	join(28664..29367,29456..29556,29664..29821,29918..30160)	Acanthamoeba castellanii str. Neff	14925420
ACA1_086290	CDS	ACA1_086290	NW_004457685.1	32428	34481	D	encoded by transcript ACA1_086290A; uncharacterized protein	join(32428..32562,32709..32832,32893..32991,33074..33189,33318..33498,33839..33908,33994..34190,34270..34481)	Acanthamoeba castellanii str. Neff	14925421
ACA1_086300	CDS	ACA1_086300	NW_004457685.1	34555	36156	R	encoded by transcript ACA1_086300A; Monoacylglycerol Oacyltransferase 2, putative	complement(join(34555..34680,34758..34827,34907..34983,35062..35201,35287..35395,35466..35526,35615..35689,35772..35874,35970..36156))	Acanthamoeba castellanii str. Neff	14925422
ACA1_086310	CDS	ACA1_086310	NW_004457685.1	36341	40526	D	encoded by transcript ACA1_086310A; uncharacterized protein	join(36341..36717,40174..40263,40367..40526)	Acanthamoeba castellanii str. Neff	14925423
ACA1_086420	CDS	ACA1_086420	NW_004457685.1	40690	42503	R	encoded by transcript ACA1_086420A; uncharacterized protein	complement(join(40690..40929,41092..41279,41384..41532,41631..41862,41949..42038,42113..42212,42327..42503))	Acanthamoeba castellanii str. Neff	14925424
ACA1_026820	CDS	ACA1_026820	NW_004457684.1	32	3538	D	encoded by transcript ACA1_026820A; uncharacterized protein	join(<32..271,356..707,770..805,898..1007,1099..2142,2212..2627,2809..3538)	Acanthamoeba castellanii str. Neff	14925411
ACA1_026830	CDS	ACA1_026830	NW_004457684.1	4062	5063	D	encoded by transcript ACA1_026830A; uncharacterized protein	join(4062..4195,4260..4345,4417..4514,4586..4700,4792..4881,4933..5063)	Acanthamoeba castellanii str. Neff	14925412
ACA1_026840	CDS	ACA1_026840	NW_004457684.1	5242	7234	D	encoded by transcript ACA1_026840A; Ser/Thr phosphatase, putative	join(5242..5344,5445..5622,5820..5909,6035..6206,6228..6312,6392..6592,6679..6759,6848..6989,7093..7234)	Acanthamoeba castellanii str. Neff	14925413
ACA1_026850	CDS	ACA1_026850	NW_004457684.1	7763	9915	R	encoded by transcript ACA1_026850A; uncharacterized protein	complement(join(7763..7922,8000..8081,8163..8401,8485..8740,8837..8997,9073..9163,9238..9453,9521..9678,9761..9915))	Acanthamoeba castellanii str. Neff	14925409
ACA1_026860	CDS	ACA1_026860	NW_004457684.1	10217	13065	R	encoded by transcript ACA1_026860A; ABC2 type transporter, putative	complement(join(10217..10365,10459..10562,10645..11099,11194..11571,11667..11905,11978..12236,12323..12465,12636..13065))	Acanthamoeba castellanii str. Neff	14925410
ACA1_014620	CDS	ACA1_014620	NW_004457683.1	37	1912	R	encoded by transcript ACA1_014620A; uncharacterized protein	complement(join(<37..72,151..254,335..1006,1150..1212,1302..1382,1487..1621,1801..1912))	Acanthamoeba castellanii str. Neff	14925408
ACA1_014630	CDS	ACA1_014630	NW_004457683.1	2477	4200	R	encoded by transcript ACA1_014630A; Doublestranded RNA binding motif domain containing protein	complement(join(2477..2617,2730..2852,2918..3010,3469..3567,3593..3713,3800..4200))	Acanthamoeba castellanii str. Neff	14925406
ACA1_014740	CDS	ACA1_014740	NW_004457683.1	6012	7260	D	encoded by transcript ACA1_014740A; cyclin, Nterminal domain containing protein	join(6012..6552,6644..6946,7007..7260)	Acanthamoeba castellanii str. Neff	14925407
ACA1_014750	CDS	ACA1_014750	NW_004457683.1	7979	9544	D	encoded by transcript ACA1_014750A; uncharacterized protein	join(7979..8134,8237..8281,8384..8496,8586..8717,8802..8872,8935..9025,9125..9300,9363..9544)	Acanthamoeba castellanii str. Neff	14925402
ACA1_014760	CDS	ACA1_014760	NW_004457683.1	10372	11156	R	encoded by transcript ACA1_014760A; uncharacterized protein	complement(join(10372..10538,10639..10800,10906..10981,11085..11156))	Acanthamoeba castellanii str. Neff	14925403
ACA1_014870	CDS	ACA1_014870	NW_004457683.1	13147	14276	D	encoded by transcript ACA1_014870A; tRNA phosphotransferase 1 isoform 1, putative	join(13147..13193,13277..13389,13466..13605,13703..13753,13830..13950,14026..14082,14155..14276)	Acanthamoeba castellanii str. Neff	14925404
ACA1_014880	CDS	ACA1_014880	NW_004457683.1	14302	14841	R	encoded by transcript ACA1_014880A; alkylation repair protein, putative	complement(join(14302..14599,14681..14841))	Acanthamoeba castellanii str. Neff	14925405
ACA1_013340	CDS	ACA1_013340	NW_004457682.1	14	2435	D	encoded by transcript ACA1_013340A; PH domain containing protein	join(14..142,220..376,457..1388,1490..1568,1675..1829,1918..2040,2118..2258,2322..2435)	Acanthamoeba castellanii str. Neff	14925401
ACA1_013350	CDS	ACA1_013350	NW_004457682.1	2488	4406	R	encoded by transcript ACA1_013350A; uncharacterized protein	complement(join(2488..3423,3438..4406))	Acanthamoeba castellanii str. Neff	14925400
ACA1_013360	CDS	ACA1_013360	NW_004457682.1	5038	6596	R	encoded by transcript ACA1_013360A; uncharacterized protein	complement(join(5038..5966,6059..6183,6277..6431,6534..6596))	Acanthamoeba castellanii str. Neff	14925397
ACA1_013370	CDS	ACA1_013370	NW_004457682.1	7016	7530	D	encoded by transcript ACA1_013370A; uncharacterized protein	join(7016..7061,7144..7299,7394..7530)	Acanthamoeba castellanii str. Neff	14925396
ACA1_013380	CDS	ACA1_013380	NW_004457682.1	7655	10365	D	encoded by transcript ACA1_013380A; ribosome biogenesis GTPase YqeH, putative	join(7655..7740,7894..8146,8253..8396,8477..8590,8651..8762,8905..9030,9117..9222,9326..9468,9592..9740,9862..10365)	Acanthamoeba castellanii str. Neff	14925398
ACA1_013390	CDS	ACA1_013390	NW_004457682.1	10489	14222	R	encoded by transcript ACA1_013390A; glucan (1,4alpha-), branching enzyme 1, putative	complement(join(10489..10539,10655..10900,11027..11263,11401..11456,11584..11683,11777..11833,11926..12035,12125..12176,12302..12434,12515..12592,12701..12802,12913..12926,12958..13121,13231..13272,13358..13444,13512..13623,13700..13812,13898..14222))	Acanthamoeba castellanii str. Neff	14925399
ACA1_165080	CDS	ACA1_165080	NW_004457681.1	70	428	R	encoded by transcript ACA1_165080A; uncharacterized protein	complement(join(70..234,315..428))	Acanthamoeba castellanii str. Neff	14925395
ACA1_165090	CDS	ACA1_165090	NW_004457681.1	847	3850	D	encoded by transcript ACA1_165090A; uncharacterized protein	join(847..1068,1290..1389,1482..1559,1658..1742,1913..2027,2162..2248,2388..2486,2640..2721,2895..3060,3363..3467,3628..3786,3832..3850)	Acanthamoeba castellanii str. Neff	14925351
ACA1_165200	CDS	ACA1_165200	NW_004457681.1	7096	7287	R	encoded by transcript ACA1_165200A; uncharacterized protein	complement(<7096..7287)	Acanthamoeba castellanii str. Neff	14925352
ACA1_165210	CDS	ACA1_165210	NW_004457681.1	7614	8705	R	encoded by transcript ACA1_165210A; Ras subfamily protein	complement(join(7614..7703,7780..7959,8054..8147,8251..8287,8433..8585,8678..8705))	Acanthamoeba castellanii str. Neff	14925353
ACA1_165230	CDS	ACA1_165230	NW_004457681.1	13629	14513	R	encoded by transcript ACA1_165230A; uncharacterized protein	complement(join(13629..14174,14380..14460,14496..14513))	Acanthamoeba castellanii str. Neff	14925355
ACA1_165240	CDS	ACA1_165240	NW_004457681.1	14530	15554	R	encoded by transcript ACA1_165240A; uncharacterized protein	complement(join(14530..14679,14752..14853,15036..15142,15239..15554))	Acanthamoeba castellanii str. Neff	14925356
ACA1_165250	CDS	ACA1_165250	NW_004457681.1	15840	17529	D	encoded by transcript ACA1_165250A; succinate dehydrogenase and fumarate reductase ironsulfur protein	join(15840..15927,16029..16070,16182..16249,16382..16467,16615..16745,16854..17160,17261..17372,17479..17529)	Acanthamoeba castellanii str. Neff	14925357
ACA1_165260	CDS	ACA1_165260	NW_004457681.1	17714	22375	R	encoded by transcript ACA1_165260A; RhoGEF domain containing protein	complement(join(17714..19090,19291..19400,19502..19609,19750..19846,19986..20165,20421..20582,20696..20791,20900..21007,21089..21256,21377..22375))	Acanthamoeba castellanii str. Neff	14925358
ACA1_165270	CDS	ACA1_165270	NW_004457681.1	23025	23782	D	encoded by transcript ACA1_165270A; uncharacterized protein	join(23025..23130,23232..23782)	Acanthamoeba castellanii str. Neff	14925359
ACA1_165280	CDS	ACA1_165280	NW_004457681.1	24050	27087	R	encoded by transcript ACA1_165280A; PH domain containing protein	complement(join(24050..25096,25202..25341,25447..25500,25581..25839,26036..26098,26269..26334,26618..26737,26872..26910,27046..27087))	Acanthamoeba castellanii str. Neff	14925360
ACA1_165390	CDS	ACA1_165390	NW_004457681.1	28307	30341	R	encoded by transcript ACA1_165390A; F-box domain containing protein	complement(join(28307..28576,28714..28827,28991..29100,29168..29183,29700..29817,29896..30038,30228..30341))	Acanthamoeba castellanii str. Neff	14925361
ACA1_165500	CDS	ACA1_165500	NW_004457681.1	31209	33405	R	encoded by transcript ACA1_165500A; histone acetyltransferase type b catalytic subunit	complement(join(31209..31469,31586..31699,31872..31981,32052..32095,32229..32333,32433..32506,32611..32781,32854..33134,33288..33405))	Acanthamoeba castellanii str. Neff	14925362
ACA1_165510	CDS	ACA1_165510	NW_004457681.1	33566	35287	D	encoded by transcript ACA1_165510A; WD40 repeat-containing protein	join(33566..33773,33973..34174,34275..34324,34406..34470,34582..34712,34779..34844,34962..35063,35167..35287)	Acanthamoeba castellanii str. Neff	14925363
ACA1_165520	CDS	ACA1_165520	NW_004457681.1	35455	39156	D	encoded by transcript ACA1_165520A; protein kinase domain containing protein	join(35455..35562,35745..35876,35971..36923,37027..37263,37388..37436,37563..37700,37806..37955,38036..38078,38190..38290,38386..38419,38558..38619,38709..38825,38882..38932,39061..39156)	Acanthamoeba castellanii str. Neff	14925364
ACA1_165530	CDS	ACA1_165530	NW_004457681.1	39285	42718	R	encoded by transcript ACA1_165530A; alpha amylase, catalytic subfamily protein	complement(join(39285..39488,39631..39699,39789..39897,39993..40043,40254..40307,40460..40514,40608..40743,40883..41014,41162..41350,41495..41568,41729..41868,41963..42162,42239..42388,42632..42718))	Acanthamoeba castellanii str. Neff	14925365
ACA1_165540	CDS	ACA1_165540	NW_004457681.1	42868	43486	R	encoded by transcript ACA1_165540A; uncharacterized protein	complement(join(42868..42976,43098..43220,43341..43486))	Acanthamoeba castellanii str. Neff	14925366
ACA1_165550	CDS	ACA1_165550	NW_004457681.1	43644	45058	R	encoded by transcript ACA1_165550A; uncharacterized protein	complement(join(43644..43918,44049..44148,44360..44559,44688..44797,44961..45058))	Acanthamoeba castellanii str. Neff	14925367
ACA1_165560	CDS	ACA1_165560	NW_004457681.1	45262	45784	D	encoded by transcript ACA1_165560A; uncharacterized protein	join(45262..45506,45583..45784)	Acanthamoeba castellanii str. Neff	14925368
ACA1_165570	CDS	ACA1_165570	NW_004457681.1	45881	53273	R	encoded by transcript ACA1_165570A; Armadillo/betacatenin-like repeat domain containing protein	complement(join(45881..46128,46230..46415,46531..46656,46747..46872,46993..47349,47422..48008,48089..48277,48365..48501,48635..48732,48819..49204,49302..49750,49832..50037,50155..50458,50543..50656,50837..51268,51421..51552,52034..52178,52271..52569,52759..52889,53028..53228,53240..53273))	Acanthamoeba castellanii str. Neff	14925369
ACA1_165580	CDS	ACA1_165580	NW_004457681.1	53595	57282	R	encoded by transcript ACA1_165580A; BTB/POZ domain containing protein	complement(join(53595..53792,53937..54132,54224..54434,54518..54574,54642..54963,55047..55175,55238..55468,55594..55681,55785..55897,55990..56206,56296..56407,56480..56587,56751..56858,56979..57282))	Acanthamoeba castellanii str. Neff	14925370
ACA1_165590	CDS	ACA1_165590	NW_004457681.1	57633	58807	D	encoded by transcript ACA1_165590A; uncharacterized protein	join(57633..57819,57906..58014,58141..58319,58430..58618,58650..58665,58738..58807)	Acanthamoeba castellanii str. Neff	14925371
ACA1_165600	CDS	ACA1_165600	NW_004457681.1	58962	61873	R	encoded by transcript ACA1_165600A; uncharacterized protein	complement(join(58962..59175,59265..59351,59501..59568,59670..59747,59852..59988,60099..60239,60367..60502,60653..60747,60855..61145,61323..61474,61570..61708,61786..61873))	Acanthamoeba castellanii str. Neff	14925372
ACA1_165620	CDS	ACA1_165620	NW_004457681.1	64367	64618	D	encoded by transcript ACA1_165620A; uncharacterized protein	join(64367..64508,64596..64618)	Acanthamoeba castellanii str. Neff	14925374
ACA1_165630	CDS	ACA1_165630	NW_004457681.1	65654	66077	R	encoded by transcript ACA1_165630A; uncharacterized protein	complement(join(65654..65759,65914..66077))	Acanthamoeba castellanii str. Neff	14925375
ACA1_165640	CDS	ACA1_165640	NW_004457681.1	67064	67521	D	encoded by transcript ACA1_165640A; uncharacterized protein	join(67064..67158,67269..67521)	Acanthamoeba castellanii str. Neff	14925376
ACA1_165650	CDS	ACA1_165650	NW_004457681.1	68228	72714	D	encoded by transcript ACA1_165650A; glutamatecysteine ligase, catalytic subunit	join(68228..68487,68561..68610,68737..68977,69236..69350,69511..69591,69743..69924,70080..70278,70380..70622,70753..70834,70913..71049,71137..71171,71424..71528,71603..71727,72213..72260,72341..72424,72491..72714)	Acanthamoeba castellanii str. Neff	14925377
ACA1_165660	CDS	ACA1_165660	NW_004457681.1	74048	74734	D	encoded by transcript ACA1_165660A; uncharacterized protein	74048..74734	Acanthamoeba castellanii str. Neff	14925378
ACA1_165670	CDS	ACA1_165670	NW_004457681.1	75179	75974	D	encoded by transcript ACA1_165670A; Glutamate-cysteine ligase	join(75179..75208,75296..75413,75545..75638,75764..75974)	Acanthamoeba castellanii str. Neff	14925379
ACA1_165680	CDS	ACA1_165680	NW_004457681.1	76755	82367	D	encoded by transcript ACA1_165680A; Retinoblastomaassociated protein A domain containing protein	join(76755..77153,77322..77392,77663..77744,77913..78046,78182..78355,78471..78535,78682..78852,78973..79104,79218..79648,79777..79976,80087..80205,80340..80515,80605..80707,80804..80981,81071..81121,81249..81361,81455..81807,81888..82047,82150..82367)	Acanthamoeba castellanii str. Neff	14925380
ACA1_165790	CDS	ACA1_165790	NW_004457681.1	82684	83974	R	encoded by transcript ACA1_165790A; uncharacterized protein	complement(join(82684..82811,82924..83168,83275..83464,83566..83591,83865..83974))	Acanthamoeba castellanii str. Neff	14925381
ACA1_165800	CDS	ACA1_165800	NW_004457681.1	84216	85738	D	encoded by transcript ACA1_165800A; uncharacterized protein	join(84216..84572,84691..84792,84869..84951,85098..85324,85452..85738)	Acanthamoeba castellanii str. Neff	14925382
ACA1_165810	CDS	ACA1_165810	NW_004457681.1	85888	90912	D	encoded by transcript ACA1_165810A; amidohydrolase domain containing protein	join(85888..85968,86092..86221,86324..86379,86488..86628,86649..86787,86910..87005,87080..87145,87279..87344,87494..87636,87753..87900,88020..88033,88261..88434,88532..88605,88705..88864,88947..89129,89212..89328,89414..89569,89654..89732,89847..89944,90067..90150,90264..90376,90471..90544,90653..90912)	Acanthamoeba castellanii str. Neff	14925383
ACA1_165820	CDS	ACA1_165820	NW_004457681.1	91012	97543	R	encoded by transcript ACA1_165820A; AMPbinding enzyme domain containing protein	complement(join(91012..91395,91591..92133,92261..92498,92621..92825,92916..93079,93205..93277,93365..93421,93548..93725,93923..94051,94197..94334,94418..94549,94654..94803,94900..94999,95133..95274,95434..95630,95749..95834,95991..96213,96333..96841,97073..97543))	Acanthamoeba castellanii str. Neff	14925384
ACA1_165830	CDS	ACA1_165830	NW_004457681.1	97782	99073	R	encoded by transcript ACA1_165830A; glutathione transferase family protein	complement(join(97782..97987,98106..98226,98367..98409,98512..98585,98640..98676,98775..98918,99009..99073))	Acanthamoeba castellanii str. Neff	14925385
ACA1_165840	CDS	ACA1_165840	NW_004457681.1	99875	100710	D	encoded by transcript ACA1_165840A; BTG family protein	join(99875..99948,100053..100710)	Acanthamoeba castellanii str. Neff	14925386
ACA1_165850	CDS	ACA1_165850	NW_004457681.1	101442	108035	R	encoded by transcript ACA1_165850A; protein kinase domain containing protein	complement(join(101442..101718,101810..101964,102104..102309,102471..102917,103020..103279,103353..104264,104344..104617,104707..104803,104901..105017,105146..105259,105405..105538,105604..105851,105930..106086,106173..106320,106397..106534,106622..106702,106959..107437,107527..107864,107953..108035))	Acanthamoeba castellanii str. Neff	14925387
ACA1_165960	CDS	ACA1_165960	NW_004457681.1	108274	109622	R	encoded by transcript ACA1_165960A; protein kinase domain containing protein	complement(join(<108274..108844,108950..109223,109312..109408,109506..>109622))	Acanthamoeba castellanii str. Neff	14925388
ACA1_166070	CDS	ACA1_166070	NW_004457681.1	110876	112375	R	encoded by transcript ACA1_166070A; malate dehydrogenase	complement(join(<110876..110986,111082..111317,111408..111585,111678..111853,111930..112050,112169..112375))	Acanthamoeba castellanii str. Neff	14925389
ACA1_166080	CDS	ACA1_166080	NW_004457681.1	112681	116522	D	encoded by transcript ACA1_166080A; uncharacterized protein	join(112681..112821,112973..113093,113229..113323,113469..113556,113726..113787,113858..114061,114163..114280,114369..114580,114660..114828,114897..115005,115089..115216,115294..115394,115462..115665,115785..115940,116021..116092,116166..116522)	Acanthamoeba castellanii str. Neff	14925390
ACA1_166090	CDS	ACA1_166090	NW_004457681.1	116598	118246	D	encoded by transcript ACA1_166090A; signal peptide peptidase	join(116598..116721,116900..117158,117270..117358,117487..117631,117699..117938,118015..118246)	Acanthamoeba castellanii str. Neff	14925391
ACA1_166100	CDS	ACA1_166100	NW_004457681.1	120046	122902	R	encoded by transcript ACA1_166100A; WD domain, G-beta repeat-containing protein	complement(join(120046..120126,120229..120362,120460..120892,121001..121107,121224..121457,121520..121738,121876..122902))	Acanthamoeba castellanii str. Neff	14925392
ACA1_166110	CDS	ACA1_166110	NW_004457681.1	123069	123584	D	encoded by transcript ACA1_166110A; uncharacterized protein	join(123069..123281,123321..123584)	Acanthamoeba castellanii str. Neff	14925393
ACA1_166120	CDS	ACA1_166120	NW_004457681.1	124970	125395	R	encoded by transcript ACA1_166120A; uncharacterized protein	complement(124970..125395)	Acanthamoeba castellanii str. Neff	14925394
ACA1_356100	CDS	ACA1_356100	NW_004457680.1	31	5293	D	encoded by transcript ACA1_356100A; replication protein A1, putative	join(<31..229,328..1346,1416..1646,1734..1881,1951..2225,2324..2449,2566..2716,2797..2922,2994..3249,3338..3445,3523..3937,4021..4167,4233..4430,4543..4689,4762..4898,4996..5293)	Acanthamoeba castellanii str. Neff	14925350
ACA1_356110	CDS	ACA1_356110	NW_004457680.1	5293	6882	D	encoded by transcript ACA1_356110A; uncharacterized protein	join(5293..5782,5846..5973,6038..6217,6239..6331,6409..6882)	Acanthamoeba castellanii str. Neff	14925330
ACA1_356120	CDS	ACA1_356120	NW_004457680.1	7200	9361	R	encoded by transcript ACA1_356120A; uncharacterized protein	complement(join(7200..8276,8369..8605,8682..8855,8981..9361))	Acanthamoeba castellanii str. Neff	14925329
ACA1_356130	CDS	ACA1_356130	NW_004457680.1	9836	10270	D	encoded by transcript ACA1_356130A; uncharacterized protein	9836..10270	Acanthamoeba castellanii str. Neff	14925331
ACA1_356140	CDS	ACA1_356140	NW_004457680.1	10543	18809	R	encoded by transcript ACA1_356140A; RasGEF domain containing protein	complement(join(10543..10757,10836..10980,11079..11195,11279..11458,11547..11714,11776..12052,12196..12581,12662..12828,12907..13120,13234..13337,13415..13559,13642..13971,14091..14250,14388..14470,14561..14755,14828..15056,15200..15279,15360..15443,15753..15878,15964..16251,16340..16858,17015..17143,17272..17434,17529..17680,17832..18809))	Acanthamoeba castellanii str. Neff	14925332
ACA1_356150	CDS	ACA1_356150	NW_004457680.1	19030	19942	R	encoded by transcript ACA1_356150A; LA virus GAG protein N-acetyltransferase	complement(join(19030..19075,19178..19349,19434..19560,19647..19792,19930..19942))	Acanthamoeba castellanii str. Neff	14925333
ACA1_356170	CDS	ACA1_356170	NW_004457680.1	22910	23535	D	encoded by transcript ACA1_356170A; uncharacterized protein	join(22910..23146,23434..23535)	Acanthamoeba castellanii str. Neff	14925335
ACA1_356180	CDS	ACA1_356180	NW_004457680.1	24002	25654	D	encoded by transcript ACA1_356180A; uncharacterized protein	join(24002..24616,24690..24792,24884..25466,25546..25654)	Acanthamoeba castellanii str. Neff	14925336
ACA1_356190	CDS	ACA1_356190	NW_004457680.1	25981	28553	D	encoded by transcript ACA1_356190A; ADP/ATP carrier protein	join(25981..26308,26425..26785,26909..27145,28319..28553)	Acanthamoeba castellanii str. Neff	14925337
ACA1_356310	CDS	ACA1_356310	NW_004457680.1	34695	35286	R	encoded by transcript ACA1_356310A; uncharacterized protein	complement(join(34695..34835,34915..35286))	Acanthamoeba castellanii str. Neff	14925339
ACA1_356420	CDS	ACA1_356420	NW_004457680.1	36112	36294	D	encoded by transcript ACA1_356420A; uncharacterized protein	36112..>36294	Acanthamoeba castellanii str. Neff	14925340
ACA1_356530	CDS	ACA1_356530	NW_004457680.1	36501	39133	R	encoded by transcript ACA1_356530A; uncharacterized protein	complement(join(36501..36923,37076..37141,37234..37317,37403..37463,37542..37606,37685..37789,37863..37914,37991..38927,39040..39133))	Acanthamoeba castellanii str. Neff	14925341
ACA1_356540	CDS	ACA1_356540	NW_004457680.1	39411	39758	R	encoded by transcript ACA1_356540A; protein serine/threonine kinase	complement(join(39411..39575,39678..39758))	Acanthamoeba castellanii str. Neff	14925342
ACA1_356650	CDS	ACA1_356650	NW_004457680.1	40462	40749	R	encoded by transcript ACA1_356650A; N-acetyltransferase, putative	complement(join(40462..40507,40610..40749))	Acanthamoeba castellanii str. Neff	14925343
ACA1_356760	CDS	ACA1_356760	NW_004457680.1	42133	43518	R	encoded by transcript ACA1_356760A; Hsp20/alpha crystallin superfamily protein	complement(join(42133..42308,42407..42650,42746..42858,42963..43124,43223..43412,43498..43518))	Acanthamoeba castellanii str. Neff	14925344
ACA1_356770	CDS	ACA1_356770	NW_004457680.1	43823	46816	R	encoded by transcript ACA1_356770A; ribonucleosidetriphosphate reductase, adenosylcobalamin-dependent, putative	complement(join(43823..44038,44140..44446,44537..44994,45082..45201,45294..45410,45505..45657,45760..45967,46100..46247,46391..46491,46573..46630,46705..46816))	Acanthamoeba castellanii str. Neff	14925345
ACA1_356780	CDS	ACA1_356780	NW_004457680.1	47318	48494	R	encoded by transcript ACA1_356780A; HD domain containing protein	complement(join(47318..47378,47458..47532,47592..47685,47772..47834,47915..48071,48149..48277,48339..48494))	Acanthamoeba castellanii str. Neff	14925346
ACA1_356790	CDS	ACA1_356790	NW_004457680.1	48823	51187	D	encoded by transcript ACA1_356790A; RhoGEF domain containing protein	join(48823..48862,48932..49019,49087..49150,49283..49405,49512..49542,49627..49714,49791..49856,49937..50050,50123..50189,50272..50402,50478..50590,50652..50757,50839..51187)	Acanthamoeba castellanii str. Neff	14925347
ACA1_356800	CDS	ACA1_356800	NW_004457680.1	51643	58867	D	encoded by transcript ACA1_356800A; gelsolin repeat-containing protein	join(51643..52377,52466..53322,53416..53826,53908..54014,54141..54999,55092..55428,55445..55680,55944..56091,56183..56299,56408..56840,56942..57183,57254..58867)	Acanthamoeba castellanii str. Neff	14925348
ACA1_356810	CDS	ACA1_356810	NW_004457680.1	59007	62671	R	encoded by transcript ACA1_356810A; protein kinase domain containing protein	complement(join(59007..59072,59154..60047,60179..60274,60347..60454,60616..60837,60942..61089,61202..61291,61420..61517,61618..61708,61781..61885,61985..62064,62137..62224,62316..62414,62532..62671))	Acanthamoeba castellanii str. Neff	14925349
ACA1_003860	CDS	ACA1_003860	NW_004457679.1	1795	2283	D	encoded by transcript ACA1_003860A; uncharacterized protein	1795..2283	Acanthamoeba castellanii str. Neff	14925327
ACA1_003870	CDS	ACA1_003870	NW_004457679.1	2400	4010	R	encoded by transcript ACA1_003870A; uncharacterized protein	complement(join(2400..2544,3193..3315,3409..4010))	Acanthamoeba castellanii str. Neff	14925323
ACA1_004080	CDS	ACA1_004080	NW_004457679.1	4662	5404	R	encoded by transcript ACA1_004080A; SAP domain containing protein	complement(<4662..5404)	Acanthamoeba castellanii str. Neff	14925324
ACA1_004190	CDS	ACA1_004190	NW_004457679.1	10325	11413	R	encoded by transcript ACA1_004190A; Fbox domain containing protein	complement(join(10325..10447,10528..10582,10661..10779,10876..11159,11236..11413))	Acanthamoeba castellanii str. Neff	14925325
ACA1_004200	CDS	ACA1_004200	NW_004457679.1	11603	12956	R	encoded by transcript ACA1_004200A; serine-protein kinase ATR family protein	complement(join(11603..11794,11865..12053,12125..12239,12320..12516,12613..12737,12815..12956))	Acanthamoeba castellanii str. Neff	14925326
ACA1_338390	CDS	ACA1_338390	NW_004457678.1	238	755	R	encoded by transcript ACA1_338390A; uncharacterized protein	complement(join(238..252,325..575,662..755))	Acanthamoeba castellanii str. Neff	14925322
ACA1_338400	CDS	ACA1_338400	NW_004457678.1	2604	3936	D	encoded by transcript ACA1_338400A; endonuclease/exonuclease/phosphatase family protein	join(2604..2803,2897..2954,3077..3151,3181..3240,3302..3348,3437..3536,3646..3936)	Acanthamoeba castellanii str. Neff	14925321
ACA1_338420	CDS	ACA1_338420	NW_004457678.1	15598	16410	R	encoded by transcript ACA1_338420A; uncharacterized protein	complement(join(15598..15856,15883..15919,15931..15987,16208..16272,16379..16410))	Acanthamoeba castellanii str. Neff	14925317
ACA1_338630	CDS	ACA1_338630	NW_004457678.1	18907	19599	D	encoded by transcript ACA1_338630A; uncharacterized protein	join(18907..19007,19079..19154,19202..19327,19396..19599)	Acanthamoeba castellanii str. Neff	14925319
ACA1_338640	CDS	ACA1_338640	NW_004457678.1	19719	20778	R	encoded by transcript ACA1_338640A; Poly(ADPribose) polymerase catalytic domain containing protein	complement(join(19719..19863,19973..20180,20314..20371,20452..20574,20662..>20778))	Acanthamoeba castellanii str. Neff	14925320
ACA1_168800	CDS	ACA1_168800	NW_004457677.1	19	789	R	encoded by transcript ACA1_168800A; uncharacterized protein	complement(join(<19..207,315..513,581..789))	Acanthamoeba castellanii str. Neff	14925316
ACA1_168910	CDS	ACA1_168910	NW_004457677.1	2721	3491	R	encoded by transcript ACA1_168910A; uncharacterized protein	complement(join(2721..3410,3483..3491))	Acanthamoeba castellanii str. Neff	14925269
ACA1_168920	CDS	ACA1_168920	NW_004457677.1	5043	7192	D	encoded by transcript ACA1_168920A; helicase associated domain containing protein	join(5043..5156,5639..7192)	Acanthamoeba castellanii str. Neff	14925270
ACA1_168930	CDS	ACA1_168930	NW_004457677.1	7655	10336	D	encoded by transcript ACA1_168930A; uncharacterized protein	join(7655..7861,8029..8190,8292..8408,8584..8689,8782..8988,9117..9237,9313..9422,9487..9530,9659..10336)	Acanthamoeba castellanii str. Neff	14925271
ACA1_168940	CDS	ACA1_168940	NW_004457677.1	10808	12465	R	encoded by transcript ACA1_168940A; uncharacterized protein	complement(join(10808..11137,11419..12004,12113..12465))	Acanthamoeba castellanii str. Neff	14925272
ACA1_169050	CDS	ACA1_169050	NW_004457677.1	12568	12972	R	encoded by transcript ACA1_169050A; Profilin1B, putative	complement(12568..12972)	Acanthamoeba castellanii str. Neff	14925273
ACA1_169060	CDS	ACA1_169060	NW_004457677.1	13093	14265	R	encoded by transcript ACA1_169060A; derlin,putative	complement(join(13093..13168,13263..13389,13500..13677,13779..13860,13962..14035,14113..14265))	Acanthamoeba castellanii str. Neff	14925274
ACA1_169070	CDS	ACA1_169070	NW_004457677.1	14566	17555	D	encoded by transcript ACA1_169070A; integral membrane protein 1 isoform 5, putative	join(14566..14716,14816..14876,14956..15077,15166..15360,15446..15943,16039..16274,16367..16591,16703..17133,17212..17306,17413..17555)	Acanthamoeba castellanii str. Neff	14925275
ACA1_169080	CDS	ACA1_169080	NW_004457677.1	17875	19310	D	encoded by transcript ACA1_169080A; uncharacterized protein	join(17875..18648,18752..18908,19018..19087,19175..19310)	Acanthamoeba castellanii str. Neff	14925276
ACA1_169090	CDS	ACA1_169090	NW_004457677.1	19421	21451	R	encoded by transcript ACA1_169090A; 3beta hydroxysteroid dehydrogenase/isomerase family protein	complement(join(19421..19643,19750..20042,20157..20237,20339..20439,20533..20685,20797..20881,21014..21108,21197..21248,21314..21451))	Acanthamoeba castellanii str. Neff	14925277
ACA1_169100	CDS	ACA1_169100	NW_004457677.1	21576	22437	D	encoded by transcript ACA1_169100A; dual specificity phosphatase, catalytic domain containing protein	join(21576..21846,21918..22012,22081..22157,22248..22437)	Acanthamoeba castellanii str. Neff	14925278
ACA1_169110	CDS	ACA1_169110	NW_004457677.1	22600	25327	R	encoded by transcript ACA1_169110A; RhoGEF domain containing protein	complement(join(22600..23686,23765..23916,24011..24074,24167..24336,24420..24584,24665..24868,24961..25091,25200..25215,25244..25327))	Acanthamoeba castellanii str. Neff	14925279
ACA1_169220	CDS	ACA1_169220	NW_004457677.1	29421	32347	D	encoded by transcript ACA1_169220A; SAM domain (Sterile alpha motif) domain containing protein	join(29421..29429,29501..29635,29717..30116,30197..30288,30640..30735,30819..30938,31020..31092,31183..31244,31341..31428,31516..31631,31699..31951,32016..32347)	Acanthamoeba castellanii str. Neff	14925280
ACA1_169330	CDS	ACA1_169330	NW_004457677.1	32596	33319	R	encoded by transcript ACA1_169330A; RNA polymerase Rpb5, Cterminal domain containing protein	complement(join(32596..32608,32718..33319))	Acanthamoeba castellanii str. Neff	14925281
ACA1_169540	CDS	ACA1_169540	NW_004457677.1	38090	38761	D	encoded by transcript ACA1_169540A; uncharacterized protein	38090..38761	Acanthamoeba castellanii str. Neff	14925282
ACA1_169550	CDS	ACA1_169550	NW_004457677.1	39348	41521	D	encoded by transcript ACA1_169550A; ubiquitin carboxyl-terminal hydrolase	join(39348..39622,39709..39850,39924..40028,40115..40428,40525..40653,40727..40848,40965..41521)	Acanthamoeba castellanii str. Neff	14925283
ACA1_169560	CDS	ACA1_169560	NW_004457677.1	41895	42817	D	encoded by transcript ACA1_169560A; ubiquitin interaction motif domain containing protein	join(41895..41972,42071..42817)	Acanthamoeba castellanii str. Neff	14925284
ACA1_169570	CDS	ACA1_169570	NW_004457677.1	43055	43876	D	encoded by transcript ACA1_169570A; FYVE zinc finger domain containing protein	43055..43876	Acanthamoeba castellanii str. Neff	14925285
ACA1_169580	CDS	ACA1_169580	NW_004457677.1	44258	45886	D	encoded by transcript ACA1_169580A; uncharacterized protein	join(44258..44417,44530..44606,44691..44873,44960..45073,45167..45886)	Acanthamoeba castellanii str. Neff	14925286
ACA1_169590	CDS	ACA1_169590	NW_004457677.1	46474	49935	D	encoded by transcript ACA1_169590A; ubiquitin interaction motif domain containing protein	join(46474..46748,46832..46973,47040..47144,47231..47544,47642..47770,47844..47965,48082..48617,48979..49092,49192..49935)	Acanthamoeba castellanii str. Neff	14925287
ACA1_169700	CDS	ACA1_169700	NW_004457677.1	50571	53971	D	encoded by transcript ACA1_169700A; BTB/POZ domain containing protein	join(50571..50934,51012..51254,51318..51430,51542..51827,51926..51989,52026..52081,52165..52290,52381..52679,52690..53605,53712..53971)	Acanthamoeba castellanii str. Neff	14925288
ACA1_169710	CDS	ACA1_169710	NW_004457677.1	54637	57862	D	encoded by transcript ACA1_169710A; Hsp20/alpha crystallin superfamily protein	join(54637..54745,54905..55230,55365..55424,55517..55569,55761..55954,56107..56275,56356..56576,56667..56762,56839..56999,57087..57204,57329..57426,57524..57664,57755..57862)	Acanthamoeba castellanii str. Neff	14925289
ACA1_169720	CDS	ACA1_169720	NW_004457677.1	57979	59555	D	encoded by transcript ACA1_169720A; uncharacterized protein	join(57979..58946,59066..59555)	Acanthamoeba castellanii str. Neff	14925290
ACA1_169730	CDS	ACA1_169730	NW_004457677.1	60038	60223	D	encoded by transcript ACA1_169730A; uncharacterized protein	60038..60223	Acanthamoeba castellanii str. Neff	14925291
ACA1_169740	CDS	ACA1_169740	NW_004457677.1	60258	60620	R	encoded by transcript ACA1_169740A; uncharacterized protein	complement(join(60258..60278,60354..60620))	Acanthamoeba castellanii str. Neff	14925292
ACA1_169750	CDS	ACA1_169750	NW_004457677.1	60890	61279	R	encoded by transcript ACA1_169750A; uncharacterized protein	complement(60890..61279)	Acanthamoeba castellanii str. Neff	14925293
ACA1_169760	CDS	ACA1_169760	NW_004457677.1	61324	63563	D	encoded by transcript ACA1_169760A; Opioid growth factor receptor (OGFr) conserved regioncontaining protein	join(61324..61411,61649..61854,61998..62101,62230..62361,62496..62620,62698..62882,62974..63030,63085..63475,63493..63563)	Acanthamoeba castellanii str. Neff	14925294
ACA1_169770	CDS	ACA1_169770	NW_004457677.1	63473	64042	R	encoded by transcript ACA1_169770A; uncharacterized protein	complement(join(63473..63613,63652..63757,63849..>64042))	Acanthamoeba castellanii str. Neff	14925295
ACA1_169880	CDS	ACA1_169880	NW_004457677.1	65985	67061	R	encoded by transcript ACA1_169880A; uncharacterized protein	complement(join(65985..66120,66205..66593,66749..66900,66971..67061))	Acanthamoeba castellanii str. Neff	14925296
ACA1_169890	CDS	ACA1_169890	NW_004457677.1	67466	69125	D	encoded by transcript ACA1_169890A; DEAD/DEAH box helicase domain containing protein	join(67466..67841,67917..68040,68138..68258,68341..68493,68690..68790,68873..68986,69107..69125)	Acanthamoeba castellanii str. Neff	14925297
ACA1_170100	CDS	ACA1_170100	NW_004457677.1	71152	72300	D	encoded by transcript ACA1_170100A; DEAD (AspGlu-Ala-Asp) box polypeptide 47 isoform 3, putative	join(<71152..71331,71420..71520,71608..71717,71845..72123,72188..>72300)	Acanthamoeba castellanii str. Neff	14925298
ACA1_170210	CDS	ACA1_170210	NW_004457677.1	72586	73808	R	encoded by transcript ACA1_170210A; uncharacterized protein	complement(join(72586..72847,72937..73019,73096..73366,73435..73808))	Acanthamoeba castellanii str. Neff	14925299
ACA1_170220	CDS	ACA1_170220	NW_004457677.1	74108	74755	D	encoded by transcript ACA1_170220A; pyridoxamine 5'phosphate oxidase family superfamily protein	join(74108..74378,74457..74755)	Acanthamoeba castellanii str. Neff	14925300
ACA1_170230	CDS	ACA1_170230	NW_004457677.1	75260	75641	R	encoded by transcript ACA1_170230A; uncharacterized protein	complement(join(75260..75522,75620..75641))	Acanthamoeba castellanii str. Neff	14925301
ACA1_170240	CDS	ACA1_170240	NW_004457677.1	76061	78316	R	encoded by transcript ACA1_170240A; DNA 3'phosphatase	complement(join(76061..76181,76270..76313,76385..76455,76527..76597,76675..76824,76898..76958,77033..77215,77287..77644,77729..77817,77907..77970,78052..78117,78176..78316))	Acanthamoeba castellanii str. Neff	14925302
ACA1_170250	CDS	ACA1_170250	NW_004457677.1	78949	80282	R	encoded by transcript ACA1_170250A; uncharacterized protein	complement(join(78949..78992,79017..79137,79255..79492,79601..79790,79886..80282))	Acanthamoeba castellanii str. Neff	14925303
ACA1_170260	CDS	ACA1_170260	NW_004457677.1	80845	81119	D	encoded by transcript ACA1_170260A; uncharacterized protein	join(80845..80967,81042..81119)	Acanthamoeba castellanii str. Neff	14925304
ACA1_170270	CDS	ACA1_170270	NW_004457677.1	81404	84366	D	encoded by transcript ACA1_170270A; uncharacterized protein	join(81404..81429,81527..81647,81878..82891,82987..84366)	Acanthamoeba castellanii str. Neff	14925305
ACA1_170280	CDS	ACA1_170280	NW_004457677.1	84434	85519	R	encoded by transcript ACA1_170280A; uncharacterized protein	complement(join(84434..84574,84637..85068,85093..85211,85276..85396,85463..85519))	Acanthamoeba castellanii str. Neff	14925306
ACA1_170290	CDS	ACA1_170290	NW_004457677.1	85790	86985	D	encoded by transcript ACA1_170290A; YbaK/proline-tRNA ligase associated domain containing protein	join(85790..85997,86094..86200,86276..86396,86501..86574,86640..86771,86872..86985)	Acanthamoeba castellanii str. Neff	14925307
ACA1_170300	CDS	ACA1_170300	NW_004457677.1	87242	90484	D	encoded by transcript ACA1_170300A; uncharacterized protein	join(87242..87308,87440..87573,87639..87740,87839..87926,88051..88191,88263..88343,88497..88690,88719..88860,88938..89007,89098..89193,89276..89505,89602..89725,89852..89997,90062..90177,90293..90484)	Acanthamoeba castellanii str. Neff	14925308
ACA1_170310	CDS	ACA1_170310	NW_004457677.1	90682	91215	D	encoded by transcript ACA1_170310A; uncharacterized protein	join(90682..90758,90822..90931,91019..91215)	Acanthamoeba castellanii str. Neff	14925309
ACA1_170320	CDS	ACA1_170320	NW_004457677.1	92023	93153	R	encoded by transcript ACA1_170320A; uncharacterized protein	complement(92023..93153)	Acanthamoeba castellanii str. Neff	14925310
ACA1_170530	CDS	ACA1_170530	NW_004457677.1	95153	96845	R	encoded by transcript ACA1_170530A; uncharacterized protein	complement(join(95153..95221,95241..95451,95576..96048,96705..96845))	Acanthamoeba castellanii str. Neff	14925311
ACA1_170640	CDS	ACA1_170640	NW_004457677.1	98219	99970	D	encoded by transcript ACA1_170640A; serine/threonineprotein kinase-like protein	join(98219..98356,98417..98449,98529..98580,98665..98781,98871..98981,99060..99094,99161..99230,99298..99387,99487..99628,99713..99812,99896..99970)	Acanthamoeba castellanii str. Neff	14925312
ACA1_170660	CDS	ACA1_170660	NW_004457677.1	102654	104723	D	encoded by transcript ACA1_170660A; uncharacterized protein	102654..104723	Acanthamoeba castellanii str. Neff	14925314
ACA1_170670	CDS	ACA1_170670	NW_004457677.1	104804	107323	D	encoded by transcript ACA1_170670A; FRAP-related family protein	join(104804..104872,104944..105093,105172..105287,105368..105661,105733..105897,106066..106236,106299..106497,106585..106680,106755..106932,107012..>107323)	Acanthamoeba castellanii str. Neff	14925315
ACA1_271960	CDS	ACA1_271960	NW_004457676.1	72	485	R	encoded by transcript ACA1_271960A; uncharacterized protein	complement(join(<72..143,193..485))	Acanthamoeba castellanii str. Neff	14925268
ACA1_271970	CDS	ACA1_271970	NW_004457676.1	1111	1689	R	encoded by transcript ACA1_271970A; uncharacterized protein	complement(join(1111..1491,1603..1689))	Acanthamoeba castellanii str. Neff	14925267
ACA1_272080	CDS	ACA1_272080	NW_004457676.1	2857	4386	R	encoded by transcript ACA1_272080A; uncharacterized protein	complement(join(2857..2928,3105..3476,3588..3772,3884..4178,4219..4234,4289..4386))	Acanthamoeba castellanii str. Neff	14925231
ACA1_272090	CDS	ACA1_272090	NW_004457676.1	4704	9719	R	encoded by transcript ACA1_272090A; Ras subfamily protein	complement(join(4704..5009,5102..5280,5434..5527,5656..5728,5814..5866,5942..6321,6389..6438,6510..6706,6861..7435,7532..7831,7898..8160,8292..8358,8478..8618,8720..8843,9021..9087,9184..9333,9414..9432,9509..9583,9692..9719))	Acanthamoeba castellanii str. Neff	14925232
ACA1_272100	CDS	ACA1_272100	NW_004457676.1	12726	17460	D	encoded by transcript ACA1_272100A; uncharacterized protein	join(12726..13478,14201..16684,16790..16994,17089..17125,17217..17460)	Acanthamoeba castellanii str. Neff	14925233
ACA1_272220	CDS	ACA1_272220	NW_004457676.1	18386	19064	D	encoded by transcript ACA1_272220A; uncharacterized protein	join(18386..18428,18471..18568,18692..18868,18981..19064)	Acanthamoeba castellanii str. Neff	14925230
ACA1_272240	CDS	ACA1_272240	NW_004457676.1	38411	40880	D	encoded by transcript ACA1_272240A; uncharacterized protein	join(38411..38539,38559..38927,39004..39091,39207..39308,39414..39561,39647..39923,40004..40224,40295..40444,40549..40677,40751..40880)	Acanthamoeba castellanii str. Neff	14925235
ACA1_272250	CDS	ACA1_272250	NW_004457676.1	41010	41639	R	encoded by transcript ACA1_272250A; hemerythrin hhe cation binding subfamily protein	complement(join(41010..41508,41575..41639))	Acanthamoeba castellanii str. Neff	14925236
ACA1_272260	CDS	ACA1_272260	NW_004457676.1	42025	43969	R	encoded by transcript ACA1_272260A; acetylornithine deacetylase or succinyldiaminopimelate desuccinylase	complement(join(42025..42127,42212..42369,42442..42605,42685..42727,42832..42979,43080..43306,43409..43572,43681..43969))	Acanthamoeba castellanii str. Neff	14925237
ACA1_272270	CDS	ACA1_272270	NW_004457676.1	44189	48120	R	encoded by transcript ACA1_272270A; C2 domain containing protein	complement(join(44189..44324,44443..44588,44708..44789,44879..44958,45070..45206,45294..45388,45486..45697,45791..45896,45930..46072,46160..46249,46323..46493,46594..46671,46749..46820,46911..47020,47140..47303,47378..47668,47846..48120))	Acanthamoeba castellanii str. Neff	14925238
ACA1_272280	CDS	ACA1_272280	NW_004457676.1	48578	48948	R	encoded by transcript ACA1_272280A; uncharacterized protein	complement(join(48578..48761,48851..48948))	Acanthamoeba castellanii str. Neff	14925239
ACA1_272390	CDS	ACA1_272390	NW_004457676.1	50482	50646	D	encoded by transcript ACA1_272390A; uncharacterized protein	50482..>50646	Acanthamoeba castellanii str. Neff	14925240
ACA1_272500	CDS	ACA1_272500	NW_004457676.1	51045	51194	D	encoded by transcript ACA1_272500A; uncharacterized protein	51045..>51194	Acanthamoeba castellanii str. Neff	14925241
ACA1_272510	CDS	ACA1_272510	NW_004457676.1	51858	52213	R	encoded by transcript ACA1_272510A; uncharacterized protein	complement(join(51858..52041,52101..52213))	Acanthamoeba castellanii str. Neff	14925242
ACA1_272530	CDS	ACA1_272530	NW_004457676.1	54559	57568	D	encoded by transcript ACA1_272530A; von Willebrand factor type A domain containing protein	join(54559..54571,54740..54820,54912..55005,55095..55234,55315..55415,55511..55711,55788..55901,55977..56060,56156..56197,56315..56353,56434..56687,56767..57295,57377..57568)	Acanthamoeba castellanii str. Neff	14925244
ACA1_272540	CDS	ACA1_272540	NW_004457676.1	57641	58968	R	encoded by transcript ACA1_272540A; leucine rich repeat domain containing protein	complement(join(57641..57767,57837..57921,58050..58098,58169..58264,58354..58445,58569..58651,58731..58807,58900..58968))	Acanthamoeba castellanii str. Neff	14925245
ACA1_272550	CDS	ACA1_272550	NW_004457676.1	59650	62411	D	encoded by transcript ACA1_272550A; RNA recognition motif domain containing protein	join(59650..60147,60248..60523,60599..60805,60879..61014,61133..61305,61400..61499,61781..61869,61947..62411)	Acanthamoeba castellanii str. Neff	14925246
ACA1_272570	CDS	ACA1_272570	NW_004457676.1	64410	66496	R	encoded by transcript ACA1_272570A; uncharacterized protein	complement(join(64410..64836,64905..66496))	Acanthamoeba castellanii str. Neff	14925248
ACA1_272580	CDS	ACA1_272580	NW_004457676.1	67118	69103	R	encoded by transcript ACA1_272580A; acetylornithine deacetylase	complement(join(67118..67258,67368..67417,67479..67912,68024..68141,68212..68616,68809..68930,69018..69103))	Acanthamoeba castellanii str. Neff	14925249
ACA1_272590	CDS	ACA1_272590	NW_004457676.1	69201	71887	D	encoded by transcript ACA1_272590A; R3H domain containing protein	join(69201..69263,69345..69726,69835..70009,70070..70331,70405..70528,70578..70749,70829..71031,71091..71196,71273..71355,71403..71599,71675..71887)	Acanthamoeba castellanii str. Neff	14925250
ACA1_272600	CDS	ACA1_272600	NW_004457676.1	72553	76932	R	encoded by transcript ACA1_272600A; SAM domain (Sterile alpha motif) domain containing protein	complement(join(72553..73163,73253..73364,73444..75686,75790..76532,76661..76932))	Acanthamoeba castellanii str. Neff	14925251
ACA1_272610	CDS	ACA1_272610	NW_004457676.1	77627	79371	D	encoded by transcript ACA1_272610A; uncharacterized protein	join(77627..77723,77788..77865,77971..78031,78119..78707,78810..79265,79336..79371)	Acanthamoeba castellanii str. Neff	14925252
ACA1_272620	CDS	ACA1_272620	NW_004457676.1	79784	80077	D	encoded by transcript ACA1_272620A; uncharacterized protein	join(79784..79913,79974..80077)	Acanthamoeba castellanii str. Neff	14925253
ACA1_272630	CDS	ACA1_272630	NW_004457676.1	80203	81242	R	encoded by transcript ACA1_272630A; peroxiredoxin family protein	complement(join(80203..80270,80339..80696,80772..80869,81014..81242))	Acanthamoeba castellanii str. Neff	14925254
ACA1_272640	CDS	ACA1_272640	NW_004457676.1	81355	82680	R	encoded by transcript ACA1_272640A; PH domain containing protein	complement(join(81355..81554,81628..81898,82011..82199,82284..82373,82449..82529,82603..82680))	Acanthamoeba castellanii str. Neff	14925255
ACA1_272650	CDS	ACA1_272650	NW_004457676.1	82694	85070	R	encoded by transcript ACA1_272650A; uncharacterized protein	complement(join(82694..82843,82987..83409,83502..83608,83689..83862,83942..84028,84125..84455,84496..84702,84753..84869,84927..85070))	Acanthamoeba castellanii str. Neff	14925256
ACA1_272660	CDS	ACA1_272660	NW_004457676.1	85290	87493	R	encoded by transcript ACA1_272660A; alpha-l-fucosidase family protein	complement(join(85290..85674,85753..85869,86011..86243,86327..86453,86514..86589,86673..86736,86826..86923,87010..87092,87192..87284,87429..87493))	Acanthamoeba castellanii str. Neff	14925257
ACA1_272670	CDS	ACA1_272670	NW_004457676.1	87727	88545	D	encoded by transcript ACA1_272670A; uncharacterized protein	87727..88545	Acanthamoeba castellanii str. Neff	14925258
ACA1_272680	CDS	ACA1_272680	NW_004457676.1	88662	90472	R	encoded by transcript ACA1_272680A; uncharacterized protein	complement(join(88662..88781,88870..89039,89160..89352,89423..89587,89677..89791,89885..90061,90137..90255,90380..90472))	Acanthamoeba castellanii str. Neff	14925259
ACA1_272700	CDS	ACA1_272700	NW_004457676.1	96252	101868	D	encoded by transcript ACA1_272700A; Ankyrin repeatcontaining protein	join(96252..96672,96803..96882,96968..97037,97112..97147,97245..97461,97480..97897,98042..98107,98176..98296,98371..98539,98601..98650,98725..98916,99005..99531,99625..99688,99771..99909,100012..100180,100250..100370,100475..100686,100806..101085,101279..101626,101703..101782,101797..>101868)	Acanthamoeba castellanii str. Neff	14925261
ACA1_272710	CDS	ACA1_272710	NW_004457676.1	101927	104911	D	encoded by transcript ACA1_272710A; Poly(ADPribose) polymerase catalytic domain containing protein	join(101927..102500,102590..102842,103028..103139,103231..103598,103726..104137,104237..104312,104405..104480,104514..104690,104764..104911)	Acanthamoeba castellanii str. Neff	14925262
ACA1_272720	CDS	ACA1_272720	NW_004457676.1	105396	107310	R	encoded by transcript ACA1_272720A; Hypothetical protein	complement(join(105396..105581,105657..106053,106136..106366,106466..106609,106695..107023,107130..107203,107265..107310))	Acanthamoeba castellanii str. Neff	14925263
ACA1_272730	CDS	ACA1_272730	NW_004457676.1	107706	111495	R	encoded by transcript ACA1_272730A; Ubiquitin carboxylterminal hydrolase	complement(join(107706..107885,107967..108098,108185..108276,108348..109165,109224..109908,109985..110078,110156..110284,110352..110523,110789..110811,110843..110915,110988..111084,111168..111278,111351..111495))	Acanthamoeba castellanii str. Neff	14925264
ACA1_272740	CDS	ACA1_272740	NW_004457676.1	112392	115506	D	encoded by transcript ACA1_272740A; uncharacterized protein	join(112392..112545,112738..112835,112939..113084,113179..113370,113461..113674,113761..114195,114392..114600,114692..114845,114937..115506)	Acanthamoeba castellanii str. Neff	14925265
ACA1_272850	CDS	ACA1_272850	NW_004457676.1	118390	119414	D	encoded by transcript ACA1_272850A; PH domain containing protein	join(118390..118437,118522..118710,118836..119106,119215..119414)	Acanthamoeba castellanii str. Neff	14925266
ACA1_375810	CDS	ACA1_375810	NW_004457675.1	182	1091	D	encoded by transcript ACA1_375810A; uncharacterized protein	join(182..334,446..556,681..796,839..918,1021..1091)	Acanthamoeba castellanii str. Neff	14925228
ACA1_375820	CDS	ACA1_375820	NW_004457675.1	1731	4659	D	encoded by transcript ACA1_375820A; Ptype ATPase	join(1731..2023,2168..2255,2357..2439,2534..2659,2746..2870,2971..3032,3138..3180,3264..3339,3453..3567,3642..3752,3845..3943,4037..4159,4241..>4659)	Acanthamoeba castellanii str. Neff	14925148
ACA1_375930	CDS	ACA1_375930	NW_004457675.1	5097	6769	R	encoded by transcript ACA1_375930A; Sad1 / UNClike C-terminal domain containing protein	complement(join(<5097..5196,5272..5491,5592..5713,5835..5984,6062..6697,6752..6769))	Acanthamoeba castellanii str. Neff	14925149
ACA1_375940	CDS	ACA1_375940	NW_004457675.1	7580	9679	D	encoded by transcript ACA1_375940A; Choline/Carnitine oacyltransferase superfamily protein	join(7580..7657,8079..8410,8510..8719,8841..9017,9137..9323,9551..9679)	Acanthamoeba castellanii str. Neff	14925150
ACA1_375950	CDS	ACA1_375950	NW_004457675.1	9801	11056	R	encoded by transcript ACA1_375950A; uncharacterized protein	complement(join(9801..9885,10017..10133,10222..10235,10329..10415,10432..10482,10713..10797,10875..11056))	Acanthamoeba castellanii str. Neff	14925151
ACA1_375960	CDS	ACA1_375960	NW_004457675.1	11416	14792	D	encoded by transcript ACA1_375960A; ATPdependent RNA helicase ddx54, putative	join(11416..11681,11804..11899,11997..12261,12373..12637,12653..12693,12778..12948,13045..13318,13421..13724,13865..13966,14086..14208,14321..14792)	Acanthamoeba castellanii str. Neff	14925152
ACA1_375970	CDS	ACA1_375970	NW_004457675.1	16215	19284	D	encoded by transcript ACA1_375970A; betaine aldehyde dehydrogenase	join(16215..16303,16374..16417,16567..16665,16734..16809,16905..16995,17110..17274,17412..17508,17638..17703,17784..17880,17987..18048,18133..18201,18337..18482,18517..18672,18767..18862,18943..19060,19136..19284)	Acanthamoeba castellanii str. Neff	14925153
ACA1_375980	CDS	ACA1_375980	NW_004457675.1	19440	20711	D	encoded by transcript ACA1_375980A; xylosyltransferase I, putative	join(19440..19520,19588..20115,20178..20342,20592..20662,20690..20711)	Acanthamoeba castellanii str. Neff	14925154
ACA1_375990	CDS	ACA1_375990	NW_004457675.1	20834	23319	R	encoded by transcript ACA1_375990A; acetylCoA acetyltransferase, mitochondrial, putative	complement(join(20834..20908,21001..21120,21259..21370,21457..21614,22062..22389,22501..22666,22761..22859,22942..23065,23281..23319))	Acanthamoeba castellanii str. Neff	14925155
ACA1_376120	CDS	ACA1_376120	NW_004457675.1	27518	30613	D	encoded by transcript ACA1_376120A; betaine aldehyde dehydrogenase	join(27518..27606,27680..27723,27864..27962,28031..28106,28214..28304,28441..28605,28722..28818,28940..29005,29137..29233,29320..29381,29460..29528,29652..29794,29846..30001,30086..30181,30273..30390,30465..30613)	Acanthamoeba castellanii str. Neff	14925158
ACA1_376130	CDS	ACA1_376130	NW_004457675.1	30800	32050	D	encoded by transcript ACA1_376130A; xylosyltransferase 1, putative	join(<30800..30835,30902..31429,31490..31654,31931..32050)	Acanthamoeba castellanii str. Neff	14925159
ACA1_376140	CDS	ACA1_376140	NW_004457675.1	32160	34580	R	encoded by transcript ACA1_376140A; acetylCoA acetyltransferase, mitochondrial, putative	complement(join(32160..32234,32323..32442,32577..32688,32760..32917,33360..33687,33789..33954,34029..34127,34212..34335,34542..34580))	Acanthamoeba castellanii str. Neff	14925160
ACA1_376150	CDS	ACA1_376150	NW_004457675.1	34938	37304	R	encoded by transcript ACA1_376150A; uncharacterized protein	complement(join(34938..35167,35309..35482,35636..35791,35880..35933,36020..36194,36259..36418,36431..36543,36645..36729,36895..37085,37194..37304))	Acanthamoeba castellanii str. Neff	14925161
ACA1_376170	CDS	ACA1_376170	NW_004457675.1	40313	43000	R	encoded by transcript ACA1_376170A; Transmembrane amino acid transporter protein	complement(join(40313..40414,40493..40580,40658..40723,40809..40864,40955..41102,41196..41274,41360..41408,41499..41599,41698..41757,41859..42185,42327..42410,42532..42623,42721..42843,42915..43000))	Acanthamoeba castellanii str. Neff	14925163
ACA1_376180	CDS	ACA1_376180	NW_004457675.1	43202	45014	R	encoded by transcript ACA1_376180A; uncharacterized protein	complement(join(43202..43974,44040..44633,44804..45014))	Acanthamoeba castellanii str. Neff	14925164
ACA1_376190	CDS	ACA1_376190	NW_004457675.1	45437	46479	D	encoded by transcript ACA1_376190A; uncharacterized protein	join(45437..45726,45812..46148,46209..46345,46413..46479)	Acanthamoeba castellanii str. Neff	14925165
ACA1_376200	CDS	ACA1_376200	NW_004457675.1	46795	50860	D	encoded by transcript ACA1_376200A; kelch repeat protein	join(46795..48825,48884..49066,49305..49470,49534..49645,49683..49963,50042..50220,50305..50554,50628..50860)	Acanthamoeba castellanii str. Neff	14925166
ACA1_376210	CDS	ACA1_376210	NW_004457675.1	51638	56364	R	encoded by transcript ACA1_376210A; uncharacterized protein	complement(join(51638..51826,51910..52212,52351..52617,52742..52849,53010..53568,53695..53852,53957..54110,54291..54352,54490..54650,54743..54812,54918..54986,55085..55246,55366..56364))	Acanthamoeba castellanii str. Neff	14925167
ACA1_376220	CDS	ACA1_376220	NW_004457675.1	56970	58279	R	encoded by transcript ACA1_376220A; breast carcinoma amplified sequence 2 (bcas2) protein	complement(join(56970..57000,57147..57232,57318..57420,57589..57759,57918..58279))	Acanthamoeba castellanii str. Neff	14925168
ACA1_376230	CDS	ACA1_376230	NW_004457675.1	58373	61361	R	encoded by transcript ACA1_376230A; Hypothetical protein	complement(join(58373..58456,58556..58692,58772..58979,59106..59368,59445..59723,59800..60013,60103..60261,60365..60460,60565..60756,60894..61083,61258..61361))	Acanthamoeba castellanii str. Neff	14925169
ACA1_376240	CDS	ACA1_376240	NW_004457675.1	61811	63207	D	encoded by transcript ACA1_376240A; ubiquitin interaction motif domain containing protein	join(61811..61905,61988..62099,62209..62595,62688..62876,62950..63207)	Acanthamoeba castellanii str. Neff	14925170
ACA1_376250	CDS	ACA1_376250	NW_004457675.1	63542	63954	R	encoded by transcript ACA1_376250A; PHD finger protein	complement(join(63542..63631,63712..63954))	Acanthamoeba castellanii str. Neff	14925171
ACA1_376260	CDS	ACA1_376260	NW_004457675.1	64892	66324	D	encoded by transcript ACA1_376260A; uncharacterized protein	join(64892..65461,65535..65762,65905..66067,66170..66324)	Acanthamoeba castellanii str. Neff	14925172
ACA1_376270	CDS	ACA1_376270	NW_004457675.1	66870	70088	D	encoded by transcript ACA1_376270A; Phospho2-dehydro-3-deoxyheptonate aldolase	join(66870..67076,67202..67320,67413..67553,67703..67757,67831..67910,68094..68267,68346..68457,68524..68625,68744..68900,69032..69161,69401..69456,69467..69647,69741..69847,69945..69998,70066..70088)	Acanthamoeba castellanii str. Neff	14925173
ACA1_376290	CDS	ACA1_376290	NW_004457675.1	71091	71998	R	encoded by transcript ACA1_376290A; uncharacterized protein	complement(join(71091..71766,71871..71998))	Acanthamoeba castellanii str. Neff	14925175
ACA1_376300	CDS	ACA1_376300	NW_004457675.1	72112	73893	D	encoded by transcript ACA1_376300A; pyridoxal kinase	join(72112..72292,72562..72641,72753..72882,73013..73133,73285..73528,73639..73893)	Acanthamoeba castellanii str. Neff	14925176
ACA1_376430	CDS	ACA1_376430	NW_004457675.1	82654	83567	R	encoded by transcript ACA1_376430A; uncharacterized protein	complement(join(82654..82802,82864..82890,83036..83144,83547..83567))	Acanthamoeba castellanii str. Neff	14925179
ACA1_376440	CDS	ACA1_376440	NW_004457675.1	83810	84451	D	encoded by transcript ACA1_376440A; uncharacterized protein	join(83810..84093,84115..84451)	Acanthamoeba castellanii str. Neff	14925180
ACA1_376450	CDS	ACA1_376450	NW_004457675.1	84727	85955	R	encoded by transcript ACA1_376450A; RNA recognition motif domain containing protein	complement(join(84727..84972,85094..85425,85498..85791,85901..85955))	Acanthamoeba castellanii str. Neff	14925181
ACA1_376460	CDS	ACA1_376460	NW_004457675.1	86043	86545	D	encoded by transcript ACA1_376460A; uncharacterized protein	join(86043..86198,86303..86545)	Acanthamoeba castellanii str. Neff	14925182
ACA1_376470	CDS	ACA1_376470	NW_004457675.1	87360	88200	R	encoded by transcript ACA1_376470A; uncharacterized protein	complement(join(87360..87391,87487..87578,87659..87726,87809..87866,87943..88000,88092..88200))	Acanthamoeba castellanii str. Neff	14925183
ACA1_376480	CDS	ACA1_376480	NW_004457675.1	88341	89425	R	encoded by transcript ACA1_376480A; RabE family small GTPase	complement(join(<88341..88390,88480..88574,88750..88830,88996..89081,89185..89257,89347..89425))	Acanthamoeba castellanii str. Neff	14925184
ACA1_376490	CDS	ACA1_376490	NW_004457675.1	90032	91170	R	encoded by transcript ACA1_376490A; TIP41like family protein	complement(join(90032..90232,90350..90440,90524..90600,90704..90956,91025..91170))	Acanthamoeba castellanii str. Neff	14925185
ACA1_376500	CDS	ACA1_376500	NW_004457675.1	91736	94092	D	encoded by transcript ACA1_376500A; isocitrate dehydrogenase subunit 1, mitochondrial precursor, putative	join(91736..91807,92050..92164,92415..92519,92596..92667,92767..92929,93012..93104,93212..93314,93424..93456,93531..93702,93810..93921,94032..94092)	Acanthamoeba castellanii str. Neff	14925186
ACA1_376510	CDS	ACA1_376510	NW_004457675.1	94250	94944	R	encoded by transcript ACA1_376510A; Hypothetical protein	complement(join(94250..94383,94453..94623,94917..94944))	Acanthamoeba castellanii str. Neff	14925187
ACA1_376520	CDS	ACA1_376520	NW_004457675.1	95276	97028	D	encoded by transcript ACA1_376520A; uncharacterized protein	join(95276..95305,95386..95506,95517..96093,96175..96286,96375..96578,96699..97028)	Acanthamoeba castellanii str. Neff	14925188
ACA1_376530	CDS	ACA1_376530	NW_004457675.1	97559	99926	D	encoded by transcript ACA1_376530A; uncharacterized protein	join(97559..97658,97949..98157,98195..98359,98487..98935,99140..99251,99365..99571,99684..99926)	Acanthamoeba castellanii str. Neff	14925189
ACA1_376540	CDS	ACA1_376540	NW_004457675.1	101206	103685	R	encoded by transcript ACA1_376540A; uncharacterized protein	complement(join(101206..101310,101406..101497,101578..101645,101745..101802,101884..101941,102033..102117,102224..103515,103584..103685))	Acanthamoeba castellanii str. Neff	14925190
ACA1_376550	CDS	ACA1_376550	NW_004457675.1	104071	105421	D	encoded by transcript ACA1_376550A; cell division control protein 2b, putative	join(104071..104291,104392..104512,104664..104998,105079..105220,105326..105421)	Acanthamoeba castellanii str. Neff	14925191
ACA1_376560	CDS	ACA1_376560	NW_004457675.1	106170	108128	D	encoded by transcript ACA1_376560A; ankyrin repeatcontaining protein	join(106170..106280,106437..107011,107114..107233,107347..107515,107601..107719,107852..108128)	Acanthamoeba castellanii str. Neff	14925192
ACA1_376570	CDS	ACA1_376570	NW_004457675.1	108218	109780	R	encoded by transcript ACA1_376570A; transferase family protein	complement(108218..109780)	Acanthamoeba castellanii str. Neff	14925193
ACA1_376580	CDS	ACA1_376580	NW_004457675.1	110035	111177	D	encoded by transcript ACA1_376580A; Ras subfamily protein	join(110035..110089,110161..110235,110306..110355,110428..110478,110560..110626,110702..110760,110891..110999,111098..111177)	Acanthamoeba castellanii str. Neff	14925194
ACA1_376590	CDS	ACA1_376590	NW_004457675.1	111693	114541	D	encoded by transcript ACA1_376590A; uncharacterized protein	join(111693..111765,111921..112330,112452..112572,112707..112892,112976..113088,113212..113572,113652..113811,113941..114169,114284..114541)	Acanthamoeba castellanii str. Neff	14925195
ACA1_376600	CDS	ACA1_376600	NW_004457675.1	114648	119828	R	encoded by transcript ACA1_376600A; Choline/Carnitine oacyltransferase superfamily protein	complement(join(114648..114773,114898..115029,115167..115355,115486..115569,115698..115786,115884..115962,116071..116131,116194..116897,117071..117533,117654..117994,118107..118306,118378..118467,118568..118796,118867..118970,119055..119182,119286..119389,119471..119613,119702..119828))	Acanthamoeba castellanii str. Neff	14925196
ACA1_376610	CDS	ACA1_376610	NW_004457675.1	120790	129833	D	encoded by transcript ACA1_376610A; DEAD/DEAH box helicase domain containing protein	join(120790..121330,121454..121564,121627..121743,121826..122071,122158..122393,122565..122742,122825..122998,123087..123434,123527..123651,123761..123979,124058..124174,124256..124430,124573..127054,127137..127289,127406..128805,128930..129065,129161..129833)	Acanthamoeba castellanii str. Neff	14925197
ACA1_376620	CDS	ACA1_376620	NW_004457675.1	130384	132507	D	encoded by transcript ACA1_376620A; late embryogenesis abundant domain containing protein	join(130384..130624,130745..132507)	Acanthamoeba castellanii str. Neff	14925198
ACA1_376630	CDS	ACA1_376630	NW_004457675.1	133122	133710	R	encoded by transcript ACA1_376630A; uncharacterized protein	complement(join(133122..133202,133225..133386,133473..133538,133576..133710))	Acanthamoeba castellanii str. Neff	14925199
ACA1_376650	CDS	ACA1_376650	NW_004457675.1	136334	137567	D	encoded by transcript ACA1_376650A; ubiquitin family protein	join(136334..136537,136784..137103,137201..137567)	Acanthamoeba castellanii str. Neff	14925201
ACA1_376660	CDS	ACA1_376660	NW_004457675.1	137868	138274	R	encoded by transcript ACA1_376660A; uncharacterized protein	complement(join(137868..137928,138010..138094,138163..138274))	Acanthamoeba castellanii str. Neff	14925202
ACA1_376670	CDS	ACA1_376670	NW_004457675.1	138435	139262	R	encoded by transcript ACA1_376670A; dtyrosyl-trna(tyr) deacylase 2, putative	complement(join(138435..138496,138589..138707,138778..138910,138991..139093,139185..139262))	Acanthamoeba castellanii str. Neff	14925203
ACA1_376680	CDS	ACA1_376680	NW_004457675.1	139375	140798	D	encoded by transcript ACA1_376680A; Yip1 domain family, member 4, putative	join(139375..139516,139637..139688,139876..139954,140084..140168,140274..140366,140463..140557,140652..140798)	Acanthamoeba castellanii str. Neff	14925204
ACA1_376690	CDS	ACA1_376690	NW_004457675.1	140931	141720	R	encoded by transcript ACA1_376690A; 60S ribosomal protein L27a, putative	complement(join(140931..141237,141330..141469,141622..141720))	Acanthamoeba castellanii str. Neff	14925205
ACA1_376700	CDS	ACA1_376700	NW_004457675.1	142112	142444	R	encoded by transcript ACA1_376700A; Histone H4, putative	complement(142112..142444)	Acanthamoeba castellanii str. Neff	14925206
ACA1_376710	CDS	ACA1_376710	NW_004457675.1	142762	145440	D	encoded by transcript ACA1_376710A; PHD-finger domain containing protein	join(142762..144795,144866..145072,145136..145327,145360..145440)	Acanthamoeba castellanii str. Neff	14925207
ACA1_376720	CDS	ACA1_376720	NW_004457675.1	145719	146667	R	encoded by transcript ACA1_376720A; LIM domain containing protein	complement(join(145719..145825,145948..145989,146112..146182,146272..146379,146470..146535,146651..146667))	Acanthamoeba castellanii str. Neff	14925208
ACA1_376730	CDS	ACA1_376730	NW_004457675.1	146995	148764	R	encoded by transcript ACA1_376730A; Glutamate/Leucine/Phenylalanine/Valine dehydrogenase family protein	complement(join(146995..147078,147184..147951,148023..148142,148237..148598,148689..148764))	Acanthamoeba castellanii str. Neff	14925209
ACA1_376740	CDS	ACA1_376740	NW_004457675.1	149537	151021	D	encoded by transcript ACA1_376740A; tubulin beta chain, putative	join(149537..149705,149805..151021)	Acanthamoeba castellanii str. Neff	14925210
ACA1_376760	CDS	ACA1_376760	NW_004457675.1	158255	164718	D	encoded by transcript ACA1_376760A; serine/threonine protein kinase	join(158255..158266,158336..158470,158545..158821,158915..159236,159306..159655,159737..159771,159876..160196,160309..160444,160551..160857,160873..160943,161051..161200,161273..161382,161460..161576,161640..161736,161830..162106,162182..162913,162990..163294,163373..163846,164027..164232,164293..164718)	Acanthamoeba castellanii str. Neff	14925212
ACA1_376770	CDS	ACA1_376770	NW_004457675.1	165219	165629	R	encoded by transcript ACA1_376770A; uncharacterized protein	complement(join(165219..165443,165552..165629))	Acanthamoeba castellanii str. Neff	14925213
ACA1_376780	CDS	ACA1_376780	NW_004457675.1	166706	167063	D	encoded by transcript ACA1_376780A; uncharacterized protein	join(166706..166814,166897..167063)	Acanthamoeba castellanii str. Neff	14925214
ACA1_376790	CDS	ACA1_376790	NW_004457675.1	167190	170589	D	encoded by transcript ACA1_376790A; pentatricopeptide repeat domain/PPR repeatcontaining protein	join(167190..167306,167373..167458,167539..167712,167793..168170,168279..169014,169122..169730,169855..169961,170119..170421,170505..170589)	Acanthamoeba castellanii str. Neff	14925215
ACA1_376800	CDS	ACA1_376800	NW_004457675.1	171117	173455	D	encoded by transcript ACA1_376800A; Inosine5'-monophosphate dehydrogenase	join(171117..171368,171454..171645,171730..171985,172079..172270,172350..172483,172686..172785,172844..172987,173094..173455)	Acanthamoeba castellanii str. Neff	14925216
ACA1_376810	CDS	ACA1_376810	NW_004457675.1	173888	175211	D	encoded by transcript ACA1_376810A; universal stress domain containing protein	join(173888..174229,174241..174375,174463..174530,174621..174759,174872..175005,175118..175211)	Acanthamoeba castellanii str. Neff	14925217
ACA1_376820	CDS	ACA1_376820	NW_004457675.1	175212	176076	R	encoded by transcript ACA1_376820A; secondary thiamine-phosphate synthase enzyme	complement(join(175212..175381,175562..175675,175794..176076))	Acanthamoeba castellanii str. Neff	14925218
ACA1_376930	CDS	ACA1_376930	NW_004457675.1	177141	178714	R	encoded by transcript ACA1_376930A; uncharacterized protein	complement(join(177141..177360,177657..177748,177839..178154,178251..178714))	Acanthamoeba castellanii str. Neff	14925219
ACA1_376940	CDS	ACA1_376940	NW_004457675.1	179706	184528	D	encoded by transcript ACA1_376940A; BNR/Aspbox repeat domain containing protein	join(179706..180042,180110..180258,180334..180391,180476..180663,180751..181125,181139..181948,182257..182590,182673..182824,182890..182938,183018..183202,183308..184528)	Acanthamoeba castellanii str. Neff	14925220
ACA1_376950	CDS	ACA1_376950	NW_004457675.1	184818	187238	D	encoded by transcript ACA1_376950A; Lsorbosone dehydrogenase	join(184818..184890,184958..185006,185092..185198,185282..185380,185452..185534,185685..185804,185898..186004,186096..186226,186335..186443,186669..186762,186818..187022,187114..187238)	Acanthamoeba castellanii str. Neff	14925221
ACA1_376960	CDS	ACA1_376960	NW_004457675.1	187359	189127	R	encoded by transcript ACA1_376960A; 2oxo acid dehydrogenase acyltransferase catalytic subunit	complement(join(187359..187424,187507..187610,187720..187836,187915..188041,188143..188277,188416..188489,188584..188656,188766..188803,188971..189127))	Acanthamoeba castellanii str. Neff	14925222
ACA1_376970	CDS	ACA1_376970	NW_004457675.1	189657	190028	R	encoded by transcript ACA1_376970A; uncharacterized protein	complement(189657..190028)	Acanthamoeba castellanii str. Neff	14925223
ACA1_376980	CDS	ACA1_376980	NW_004457675.1	191001	191628	R	encoded by transcript ACA1_376980A; uncharacterized protein	complement(join(191001..191185,191316..191628))	Acanthamoeba castellanii str. Neff	14925224
ACA1_376990	CDS	ACA1_376990	NW_004457675.1	192290	193688	D	encoded by transcript ACA1_376990A; leucine rich repeat domain containing protein	join(192290..192359,192412..193278,193352..193453,193540..193688)	Acanthamoeba castellanii str. Neff	14925225
ACA1_377000	CDS	ACA1_377000	NW_004457675.1	193774	195809	R	encoded by transcript ACA1_377000A; variant sh3 domain containing protein	complement(join(193774..193832,193920..194046,194141..195256,195337..195544,195775..195809))	Acanthamoeba castellanii str. Neff	14925226
ACA1_377010	CDS	ACA1_377010	NW_004457675.1	196031	198001	D	encoded by transcript ACA1_377010A; uncharacterized protein	join(196031..196218,196289..196495,196612..196675,196788..196846,196932..197412,197516..197722,197798..198001)	Acanthamoeba castellanii str. Neff	14925227
ACA1_152400	CDS	ACA1_152400	NW_004457674.1	1432	3018	R	encoded by transcript ACA1_152400A; uncharacterized protein	complement(join(1432..1455,1591..1677,1788..2147,2225..2768,2933..3018))	Acanthamoeba castellanii str. Neff	14925147
ACA1_152410	CDS	ACA1_152410	NW_004457674.1	3777	4172	R	encoded by transcript ACA1_152410A; uncharacterized protein	complement(3777..4172)	Acanthamoeba castellanii str. Neff	14925084
ACA1_152420	CDS	ACA1_152420	NW_004457674.1	5457	6020	R	encoded by transcript ACA1_152420A; NHL repeat-containing protein	complement(<5457..6020)	Acanthamoeba castellanii str. Neff	14925085
ACA1_152430	CDS	ACA1_152430	NW_004457674.1	6609	9135	R	encoded by transcript ACA1_152430A; Fbox domain containing protein	complement(join(6609..6647,6782..6926,7037..7212,8219..8266,8376..8447,8538..8664,8765..8862,9001..9135))	Acanthamoeba castellanii str. Neff	14925086
ACA1_152540	CDS	ACA1_152540	NW_004457674.1	9316	9675	R	encoded by transcript ACA1_152540A; uncharacterized protein	complement(join(9316..9386,9459..9675))	Acanthamoeba castellanii str. Neff	14925087
ACA1_152650	CDS	ACA1_152650	NW_004457674.1	12035	14028	R	encoded by transcript ACA1_152650A; uncharacterized protein	complement(join(12035..12412,12563..12690,12772..13033,13112..13293,13671..13725,13832..13930,13999..14028))	Acanthamoeba castellanii str. Neff	14925088
ACA1_152660	CDS	ACA1_152660	NW_004457674.1	15015	15634	D	encoded by transcript ACA1_152660A; uncharacterized protein	join(15015..15349,15568..15634)	Acanthamoeba castellanii str. Neff	14925089
ACA1_152770	CDS	ACA1_152770	NW_004457674.1	15909	16079	D	encoded by transcript ACA1_152770A; uncharacterized protein	15909..16079	Acanthamoeba castellanii str. Neff	14925090
ACA1_152880	CDS	ACA1_152880	NW_004457674.1	18085	18436	R	encoded by transcript ACA1_152880A; uncharacterized protein	complement(join(18085..18213,18368..18436))	Acanthamoeba castellanii str. Neff	14925091
ACA1_152890	CDS	ACA1_152890	NW_004457674.1	20955	23298	R	encoded by transcript ACA1_152890A; uncharacterized protein	complement(join(20955..21080,21119..21163,21339..21991,22104..23298))	Acanthamoeba castellanii str. Neff	14925092
ACA1_152900	CDS	ACA1_152900	NW_004457674.1	23804	25425	R	encoded by transcript ACA1_152900A; phosphoglycerate mutase family domain containing protein	complement(join(23804..23905,23977..24122,24250..24328,24444..24545,24617..24727,24850..24947,25016..25052,25131..25232,25327..25425))	Acanthamoeba castellanii str. Neff	14925093
ACA1_152910	CDS	ACA1_152910	NW_004457674.1	27156	28707	D	encoded by transcript ACA1_152910A; C2 domain containing protein	join(27156..27183,27266..27416,27527..27655,27812..27915,28022..28402,28538..28707)	Acanthamoeba castellanii str. Neff	14925094
ACA1_152920	CDS	ACA1_152920	NW_004457674.1	28861	32419	R	encoded by transcript ACA1_152920A; ATPase/histidine kinase/DNA gyrase B/HSP90 domain containing protein	complement(join(28861..30365,30450..30537,30609..30887,30997..31400,31490..31583,31695..31739,31946..31955,32112..32419))	Acanthamoeba castellanii str. Neff	14925095
ACA1_152930	CDS	ACA1_152930	NW_004457674.1	33905	38702	R	encoded by transcript ACA1_152930A; putative peptidoglycan binding domain containing protein	complement(join(33905..34079,34181..34320,34446..34560,34683..34858,34928..35027,35226..35647,35795..35862,35967..36435,36537..36638,36736..37279,37399..37455,37526..37604,37710..37923,38026..38113,38228..38286,38376..38450,38532..38702))	Acanthamoeba castellanii str. Neff	14925096
ACA1_152940	CDS	ACA1_152940	NW_004457674.1	38986	39782	D	encoded by transcript ACA1_152940A; uncharacterized protein	join(38986..39109,39233..39383,39495..39602,39701..39782)	Acanthamoeba castellanii str. Neff	14925097
ACA1_152950	CDS	ACA1_152950	NW_004457674.1	40151	40810	R	encoded by transcript ACA1_152950A; ubiquitin-conjugating enzyme family protein	complement(join(40151..40291,40368..40493,40556..40695,40789..40810))	Acanthamoeba castellanii str. Neff	14925098
ACA1_152960	CDS	ACA1_152960	NW_004457674.1	41019	42956	D	encoded by transcript ACA1_152960A; malate dehydrogenase	join(41019..41058,41167..41237,41305..41370,41459..41676,41746..42009,42290..42776,42852..42956)	Acanthamoeba castellanii str. Neff	14925099
ACA1_152970	CDS	ACA1_152970	NW_004457674.1	43151	44287	R	encoded by transcript ACA1_152970A; SET family protein	complement(join(43151..43273,43394..43513,43624..43703,43834..43960,44048..44118,44200..44287))	Acanthamoeba castellanii str. Neff	14925100
ACA1_152980	CDS	ACA1_152980	NW_004457674.1	45747	47458	D	encoded by transcript ACA1_152980A; slime mold cyclic amp receptor protein	join(45747..46053,46262..46342,46450..46540,46663..46787,46919..47004,47114..47458)	Acanthamoeba castellanii str. Neff	14925101
ACA1_152990	CDS	ACA1_152990	NW_004457674.1	48134	49113	R	encoded by transcript ACA1_152990A; uncharacterized protein	complement(join(48134..48152,48201..48292,48411..48538,48608..48647,48744..48891,49004..>49113))	Acanthamoeba castellanii str. Neff	14925102
ACA1_153000	CDS	ACA1_153000	NW_004457674.1	51141	52657	D	encoded by transcript ACA1_153000A; uncharacterized protein	join(51141..51447,51632..51712,51816..51906,52068..52192,52327..52443,52518..52657)	Acanthamoeba castellanii str. Neff	14925103
ACA1_153010	CDS	ACA1_153010	NW_004457674.1	53226	54401	R	encoded by transcript ACA1_153010A; uncharacterized protein	complement(join(53226..53403,53517..53608,53688..53815,53878..53917,54011..54158,54262..54401))	Acanthamoeba castellanii str. Neff	14925104
ACA1_153020	CDS	ACA1_153020	NW_004457674.1	55504	58144	R	encoded by transcript ACA1_153020A; ubiquitin carrier protein	complement(join(55504..55554,55644..55725,55831..55936,56071..56193,56320..56430,56527..56763,56846..56941,57219..57337,57468..57508,57542..57598,57673..57760,58065..58144))	Acanthamoeba castellanii str. Neff	14925105
ACA1_153030	CDS	ACA1_153030	NW_004457674.1	62581	63676	R	encoded by transcript ACA1_153030A; uncharacterized protein	complement(join(62581..62674,62743..62820,62923..63028,63086..63199,63259..63676))	Acanthamoeba castellanii str. Neff	14925106
ACA1_153040	CDS	ACA1_153040	NW_004457674.1	64203	66603	D	encoded by transcript ACA1_153040A; thioredoxin reductase 1, cytoplasmic, putative	join(64203..64296,64404..64571,64640..64763,64847..65000,65068..65357,65461..65551,65645..65806,65932..66044,66114..66374,66480..66603)	Acanthamoeba castellanii str. Neff	14925107
ACA1_153050	CDS	ACA1_153050	NW_004457674.1	68170	68996	R	encoded by transcript ACA1_153050A; uncharacterized protein	complement(join(68170..68246,68335..68392,68473..68832,68940..68996))	Acanthamoeba castellanii str. Neff	14925108
ACA1_153060	CDS	ACA1_153060	NW_004457674.1	69970	76114	R	encoded by transcript ACA1_153060A; GTPase-activator protein for Ras family GTPase	complement(join(69970..70046,70135..70192,70441..70511,70633..70781,70878..70990,71110..71260,71360..71463,71579..71704,71801..72001,72075..72329,72418..72519,72707..72772,72873..72962,73260..73314,73413..73507,73648..73740,73864..73978,74067..74233,74331..74438,74532..74601,74761..74899,75038..75199,75332..75507,75632..75793,76068..76114))	Acanthamoeba castellanii str. Neff	14925109
ACA1_153070	CDS	ACA1_153070	NW_004457674.1	76551	78134	D	encoded by transcript ACA1_153070A; DnaJ domain containing protein	join(76551..76601,76649..76972,77140..77243,77350..77558,77869..78134)	Acanthamoeba castellanii str. Neff	14925110
ACA1_153080	CDS	ACA1_153080	NW_004457674.1	78675	79952	D	encoded by transcript ACA1_153080A; uncharacterized protein	join(78675..79263,79477..79952)	Acanthamoeba castellanii str. Neff	14925111
ACA1_153190	CDS	ACA1_153190	NW_004457674.1	81616	82584	D	encoded by transcript ACA1_153190A; ironsulfur cluster assembly accessory subfamily protein	join(81616..82062,82184..82311,82410..82584)	Acanthamoeba castellanii str. Neff	14925112
ACA1_153200	CDS	ACA1_153200	NW_004457674.1	82988	86651	D	encoded by transcript ACA1_153200A; IBR domain containing protein	join(82988..83069,83145..83197,83462..83617,83900..84035,84097..84161,84298..84371,84448..84587,84757..84832,84907..84984,85066..85126,85213..85325,85414..85478,85614..85726,85878..85948,86370..86503,86587..86651)	Acanthamoeba castellanii str. Neff	14925113
ACA1_153210	CDS	ACA1_153210	NW_004457674.1	88677	90449	R	encoded by transcript ACA1_153210A; solute carrier family protein	complement(join(88677..88850,88934..89014,89136..89249,89342..89439,89554..89657,89766..89924,90014..90097,90163..90197,90291..90449))	Acanthamoeba castellanii str. Neff	14925114
ACA1_153220	CDS	ACA1_153220	NW_004457674.1	90529	91034	R	encoded by transcript ACA1_153220A; uncharacterized protein	complement(join(90529..90696,90816..91034))	Acanthamoeba castellanii str. Neff	14925115
ACA1_153230	CDS	ACA1_153230	NW_004457674.1	91073	91471	R	encoded by transcript ACA1_153230A; uncharacterized protein	complement(join(91073..91243,91337..91471))	Acanthamoeba castellanii str. Neff	14925116
ACA1_153240	CDS	ACA1_153240	NW_004457674.1	91620	95172	R	encoded by transcript ACA1_153240A; uncharacterized protein	complement(join(91620..91655,91745..91927,92071..92204,92429..92588,92721..92830,92924..92991,93069..93201,93300..93398,93555..93630,93728..93890,93981..94064,94162..94373,94417..94543,94619..94647,94731..94781,94905..95046,95126..95172))	Acanthamoeba castellanii str. Neff	14925117
ACA1_153250	CDS	ACA1_153250	NW_004457674.1	95966	96865	R	encoded by transcript ACA1_153250A; Fbox domain containing protein	complement(95966..96865)	Acanthamoeba castellanii str. Neff	14925118
ACA1_153260	CDS	ACA1_153260	NW_004457674.1	97403	98204	R	encoded by transcript ACA1_153260A; uncharacterized protein	complement(join(97403..97856,97921..98204))	Acanthamoeba castellanii str. Neff	14925119
ACA1_153270	CDS	ACA1_153270	NW_004457674.1	98651	99332	R	encoded by transcript ACA1_153270A; cytochrome b-like heme/steroid binding domain containing protein	complement(join(98651..98833,98960..99048,99179..99332))	Acanthamoeba castellanii str. Neff	14925120
ACA1_153280	CDS	ACA1_153280	NW_004457674.1	99704	100914	R	encoded by transcript ACA1_153280A; uncharacterized protein	complement(join(99704..99809,99879..100027,100123..100249,100339..100434,100550..100796,100827..100914))	Acanthamoeba castellanii str. Neff	14925121
ACA1_153290	CDS	ACA1_153290	NW_004457674.1	101551	104861	D	encoded by transcript ACA1_153290A; uncharacterized protein	join(101551..101647,101869..101967,102090..102195,102270..102363,102584..102865,102936..104861)	Acanthamoeba castellanii str. Neff	14925122
ACA1_153300	CDS	ACA1_153300	NW_004457674.1	105162	107031	D	encoded by transcript ACA1_153300A; oxidoreductase, short chain dehydrogenase/reductase superfamily protein	join(105162..105564,105645..105882,105979..106162,106688..106725,106746..106879,106967..107031)	Acanthamoeba castellanii str. Neff	14925123
ACA1_153520	CDS	ACA1_153520	NW_004457674.1	114388	116725	R	encoded by transcript ACA1_153520A; uncharacterized protein	complement(join(114388..114553,114739..114924,115031..115645,115733..115894,115994..116093,116158..116522,116664..116725))	Acanthamoeba castellanii str. Neff	14925125
ACA1_153530	CDS	ACA1_153530	NW_004457674.1	116829	117734	R	encoded by transcript ACA1_153530A; SAM domain (Sterile alpha motif) domain containing protein	complement(116829..117734)	Acanthamoeba castellanii str. Neff	14925126
ACA1_153540	CDS	ACA1_153540	NW_004457674.1	118267	120884	R	encoded by transcript ACA1_153540A; transcriptional regulator, Sir2 family protein	complement(join(118267..118360,118450..118652,118743..118969,119043..119170,119235..119398,119477..119635,119711..120143,120243..120402,120498..120644,120851..120884))	Acanthamoeba castellanii str. Neff	14925127
ACA1_153550	CDS	ACA1_153550	NW_004457674.1	121065	123534	D	encoded by transcript ACA1_153550A; aminotransferase, class V superfamily protein	join(121065..121122,121230..121370,121461..121579,121692..121773,121887..122095,122205..122297,122427..122590,122688..122776,122895..123005,123079..123143,123237..123332,123406..123534)	Acanthamoeba castellanii str. Neff	14925128
ACA1_153560	CDS	ACA1_153560	NW_004457674.1	123620	124558	R	encoded by transcript ACA1_153560A; uncharacterized protein	complement(join(123620..123762,123871..124558))	Acanthamoeba castellanii str. Neff	14925129
ACA1_153570	CDS	ACA1_153570	NW_004457674.1	124675	129810	R	encoded by transcript ACA1_153570A; EGFlike domain containing protein	complement(join(124675..124871,124969..125106,125174..125246,125392..125476,125573..125681,125807..125956,126043..126170,126280..126432,126513..126594,126735..126860,126977..127087,127349..127432,127521..127597,127837..127916,128057..128151,128246..128365,128485..128592,128675..128788,128848..128960,129131..129184,129261..129328,129392..129555,129702..129810))	Acanthamoeba castellanii str. Neff	14925130
ACA1_153580	CDS	ACA1_153580	NW_004457674.1	130219	130629	R	encoded by transcript ACA1_153580A; uncharacterized protein	complement(130219..130629)	Acanthamoeba castellanii str. Neff	14925131
ACA1_153590	CDS	ACA1_153590	NW_004457674.1	131120	133278	R	encoded by transcript ACA1_153590A; uncharacterized protein	complement(join(131120..131237,131337..131458,131551..131648,131810..132264,132334..132428,132549..132688,132777..133040,133227..133278))	Acanthamoeba castellanii str. Neff	14925132
ACA1_153600	CDS	ACA1_153600	NW_004457674.1	135472	138533	R	encoded by transcript ACA1_153600A; tRNA pseudouridine synthase A, putative	complement(join(135472..135599,135960..136063,136180..136279,136382..136505,136596..136652,136751..136823,136915..137045,137168..137228,137310..137403,137528..137627,137722..137829,137933..138043,138150..138394,138503..138533))	Acanthamoeba castellanii str. Neff	14925133
ACA1_153610	CDS	ACA1_153610	NW_004457674.1	139012	140139	D	encoded by transcript ACA1_153610A; uncharacterized protein	join(139012..139477,139568..139704,139782..139922,140056..140139)	Acanthamoeba castellanii str. Neff	14925134
ACA1_153620	CDS	ACA1_153620	NW_004457674.1	140586	141700	R	encoded by transcript ACA1_153620A; DUF1115 domain protein	complement(join(140586..140869,140977..141700))	Acanthamoeba castellanii str. Neff	14925135
ACA1_153630	CDS	ACA1_153630	NW_004457674.1	142465	143933	D	encoded by transcript ACA1_153630A; OTUlike cysteine protease family protein	join(142465..142534,142633..142691,142767..142841,142923..143009,143101..143199,143264..143407,143499..143658,143758..143933)	Acanthamoeba castellanii str. Neff	14925136
ACA1_153640	CDS	ACA1_153640	NW_004457674.1	144288	148742	D	encoded by transcript ACA1_153640A; dehydrogenase	join(144288..144291,144546..144632,144727..144857,144939..145027,145127..145238,145294..145594,145708..145802,145916..146161,146281..146397,146498..146648,146750..146769,146810..146882,147049..147216,147293..147370,147562..147719,147843..147941,148017..148220,148298..148409,148510..148742)	Acanthamoeba castellanii str. Neff	14925137
ACA1_153650	CDS	ACA1_153650	NW_004457674.1	149006	149438	D	encoded by transcript ACA1_153650A; pterin4-alpha-carbinolamine dehydratase	join(149006..149191,149262..149438)	Acanthamoeba castellanii str. Neff	14925138
ACA1_153660	CDS	ACA1_153660	NW_004457674.1	149669	150001	R	encoded by transcript ACA1_153660A; DAD family protein	complement(149669..150001)	Acanthamoeba castellanii str. Neff	14925139
ACA1_153670	CDS	ACA1_153670	NW_004457674.1	150194	152790	R	encoded by transcript ACA1_153670A; F-box domain containing protein	complement(join(150194..150269,150373..150448,150516..150669,150750..150820,150949..151019,151106..151527,151660..152241,152376..152644,152715..152790))	Acanthamoeba castellanii str. Neff	14925140
ACA1_153680	CDS	ACA1_153680	NW_004457674.1	153372	155448	R	encoded by transcript ACA1_153680A; Amz2 protein	complement(join(153372..153573,153656..153721,153807..153916,154115..154241,154298..154388,154475..154593,154674..154817,154965..155061,155143..155227,155344..155448))	Acanthamoeba castellanii str. Neff	14925141
ACA1_153690	CDS	ACA1_153690	NW_004457674.1	155744	156134	R	encoded by transcript ACA1_153690A; uncharacterized protein	complement(join(155744..155885,156010..156134))	Acanthamoeba castellanii str. Neff	14925142
ACA1_153700	CDS	ACA1_153700	NW_004457674.1	156860	163320	R	encoded by transcript ACA1_153700A; SNF2 family Nterminal domain containing protein	complement(join(156860..157092,157210..157240,157319..157516,157616..157719,157786..158218,158333..158798,158883..158967,159040..159184,159268..159331,159409..159490,159591..159694,159770..159878,159936..159999,160081..160221,160300..160724,160794..163320))	Acanthamoeba castellanii str. Neff	14925143
ACA1_153710	CDS	ACA1_153710	NW_004457674.1	163734	165931	R	encoded by transcript ACA1_153710A; uncharacterized protein	complement(join(163734..165051,165405..165419,165669..165931))	Acanthamoeba castellanii str. Neff	14925144
ACA1_153720	CDS	ACA1_153720	NW_004457674.1	167590	170971	R	encoded by transcript ACA1_153720A; plasmid pria4b orf-3 family protein	complement(join(167590..169214,169389..169448,169594..169678,169820..169930,170065..170135,170506..170971))	Acanthamoeba castellanii str. Neff	14925145
ACA1_153730	CDS	ACA1_153730	NW_004457674.1	171884	176779	D	encoded by transcript ACA1_153730A; uncharacterized protein	join(171884..171976,172157..172384,172496..172573,172635..173838,173979..174091,174104..174221,174335..174499,174579..175080,175174..175310,175403..175472,175547..175845,175955..176110,176336..176510,176587..>176779)	Acanthamoeba castellanii str. Neff	14925146
ACA1_019130	CDS	ACA1_019130	NW_004457673.1	9	663	R	encoded by transcript ACA1_019130A; (NmrA-like), putative	complement(join(<9..61,164..476,628..663))	Acanthamoeba castellanii str. Neff	14925083
ACA1_019140	CDS	ACA1_019140	NW_004457673.1	884	3128	R	encoded by transcript ACA1_019140A; regulator of chromosome condensation (RCC1) repeat domain containing protein	complement(join(884..998,1102..1232,1250..1386,1467..1570,1692..1992,2110..2227,2552..2662,2755..2863,2959..3128))	Acanthamoeba castellanii str. Neff	14925068
ACA1_019150	CDS	ACA1_019150	NW_004457673.1	4128	5904	D	encoded by transcript ACA1_019150A; kinase isozyme 4, mitochondrial precursor, putative	join(4128..4368,4516..4725,4809..4930,5096..5269,5345..5659,5755..5904)	Acanthamoeba castellanii str. Neff	14925069
ACA1_019160	CDS	ACA1_019160	NW_004457673.1	6124	7128	R	encoded by transcript ACA1_019160A; uncharacterized protein	complement(6124..7128)	Acanthamoeba castellanii str. Neff	14925070
ACA1_019170	CDS	ACA1_019170	NW_004457673.1	8047	8564	R	encoded by transcript ACA1_019170A; uncharacterized protein	complement(join(8047..8169,8235..8564))	Acanthamoeba castellanii str. Neff	14925071
ACA1_019180	CDS	ACA1_019180	NW_004457673.1	8865	10932	R	encoded by transcript ACA1_019180A; Oxysterolbinding protein, putative	complement(join(8865..9229,9404..9422,9633..9788,9895..10347,10422..10502,10564..10642,10722..10827,10893..10932))	Acanthamoeba castellanii str. Neff	14925072
ACA1_019190	CDS	ACA1_019190	NW_004457673.1	11264	13520	D	encoded by transcript ACA1_019190A; lipase/esterase, putative	join(11264..11361,11441..11571,11715..11825,12013..12136,12219..12301,12432..12522,12650..12672,12763..12876,12967..13110,13244..13296,13380..13520)	Acanthamoeba castellanii str. Neff	14925073
ACA1_019200	CDS	ACA1_019200	NW_004457673.1	13614	15138	R	encoded by transcript ACA1_019200A; uncharacterized protein	complement(join(13614..13735,13815..13913,13982..14039,14123..14263,14351..14442,14518..14758,14905..15138))	Acanthamoeba castellanii str. Neff	14925074
ACA1_019210	CDS	ACA1_019210	NW_004457673.1	15227	15927	R	encoded by transcript ACA1_019210A; uncharacterized protein	complement(join(15227..15400,15637..15720,15823..15927))	Acanthamoeba castellanii str. Neff	14925075
ACA1_019220	CDS	ACA1_019220	NW_004457673.1	16092	19871	D	encoded by transcript ACA1_019220A; amidohydrolase family protein	join(16092..16316,18679..18942,19052..19204,19326..19592,19674..19871)	Acanthamoeba castellanii str. Neff	14925076
ACA1_019330	CDS	ACA1_019330	NW_004457673.1	20214	21648	D	encoded by transcript ACA1_019330A; transporter, major intrinsic protein (MIP) superfamily protein	join(20214..20412,20634..20780,20882..21043,21102..21151,21238..21350,21450..21648)	Acanthamoeba castellanii str. Neff	14925077
ACA1_019340	CDS	ACA1_019340	NW_004457673.1	22410	27292	R	encoded by transcript ACA1_019340A; phosphorylase kinase alpha subunit	complement(join(22410..22656,22803..23186,23333..23432,23514..23769,23888..24054,24148..24399,24492..24638,24729..25208,25306..25809,25921..26041,26141..26415,26489..26795,26891..26990,27150..27292))	Acanthamoeba castellanii str. Neff	14925078
ACA1_019350	CDS	ACA1_019350	NW_004457673.1	28251	32045	R	encoded by transcript ACA1_019350A; FGGAP repeat domain containing protein	complement(join(28251..28355,28438..28549,28605..28684,28776..28923,29021..29143,29230..29427,29510..29589,29730..30044,30109..30247,30418..30484,30590..30725,30816..31255,31318..31374,31500..31531,31620..31748,31846..32045))	Acanthamoeba castellanii str. Neff	14925079
ACA1_019360	CDS	ACA1_019360	NW_004457673.1	32170	34703	D	encoded by transcript ACA1_019360A; superoxide dismutase [cu-zn], putative	join(32170..32245,32378..32472,32551..32598,32704..32817,32967..33043,33192..33322,33442..33611,33631..33699,33780..33887,33967..34062,34142..34196,34300..34446,34552..34703)	Acanthamoeba castellanii str. Neff	14925080
ACA1_019370	CDS	ACA1_019370	NW_004457673.1	34850	36470	D	encoded by transcript ACA1_019370A; copper/zinc superoxide dismutase	join(34850..35157,35250..35344,35470..35662,35747..35868,35944..36117,36204..36379,36456..36470)	Acanthamoeba castellanii str. Neff	14925081
ACA1_019380	CDS	ACA1_019380	NW_004457673.1	36891	40847	R	encoded by transcript ACA1_019380A; kinesin motor domain containing protein	complement(join(36891..36995,37086..37193,37296..37934,38081..38274,38404..38514,38614..38728,38817..39244,39344..39533,39637..39813,39910..40032,40142..40398,40497..40613,40727..40847))	Acanthamoeba castellanii str. Neff	14925082
ACA1_013490	CDS	ACA1_013490	NW_004457672.1	85	1752	D	encoded by transcript ACA1_013490A; amidohydrolase	join(85..111,225..315,385..498,576..655,754..831,913..999,1063..1136,1219..1323,1386..1752)	Acanthamoeba castellanii str. Neff	14925067
ACA1_013500	CDS	ACA1_013500	NW_004457672.1	1787	2276	R	encoded by transcript ACA1_013500A; amidohydrolase	complement(join(1787..2022,2119..2200,2271..2276))	Acanthamoeba castellanii str. Neff	14925058
ACA1_013610	CDS	ACA1_013610	NW_004457672.1	6236	12669	R	encoded by transcript ACA1_013610A; nucleotidyltransferase domain containing protein	complement(join(6236..6320,6401..6568,6661..6745,6876..6989,7081..7273,7359..7473,7570..7761,7937..8081,8210..8301,8347..8703,8775..10140,10226..10758,10996..11087,11159..11370,11465..11809,11907..12081,12182..12347,12391..12552,12608..12669))	Acanthamoeba castellanii str. Neff	14925059
ACA1_013620	CDS	ACA1_013620	NW_004457672.1	13466	14589	R	encoded by transcript ACA1_013620A; protein phosphatase 3, catalytic subunit, beta isoform, putative	complement(join(13466..13545,13646..13743,13835..13954,14017..14086,14159..14283,14385..14480,14558..14589))	Acanthamoeba castellanii str. Neff	14925060
ACA1_013630	CDS	ACA1_013630	NW_004457672.1	14878	15823	R	encoded by transcript ACA1_013630A; calcineurin subunit a, putative	complement(join(14878..14940,15014..15141,15207..15335,15399..15506,15583..15823))	Acanthamoeba castellanii str. Neff	14925061
ACA1_013640	CDS	ACA1_013640	NW_004457672.1	16077	18172	R	encoded by transcript ACA1_013640A; hydrolase, NUDIX, putative	complement(join(16077..16118,16159..16391,16455..16504,16581..16691,16773..16888,16971..17045,17140..17346,17448..17555,17637..17872,17949..18023,18154..18172))	Acanthamoeba castellanii str. Neff	14925062
ACA1_013650	CDS	ACA1_013650	NW_004457672.1	18369	18716	D	encoded by transcript ACA1_013650A; uncharacterized protein	join(18369..18459,18525..18583,18636..18716)	Acanthamoeba castellanii str. Neff	14925063
ACA1_013660	CDS	ACA1_013660	NW_004457672.1	18762	19651	D	encoded by transcript ACA1_013660A; uncharacterized protein	join(18762..18881,19009..19196,19216..19651)	Acanthamoeba castellanii str. Neff	14925064
ACA1_013670	CDS	ACA1_013670	NW_004457672.1	19851	20208	D	encoded by transcript ACA1_013670A; copper chaperone Atox1, putative	join(19851..19865,19949..20021,20084..20208)	Acanthamoeba castellanii str. Neff	14925065
ACA1_013680	CDS	ACA1_013680	NW_004457672.1	20440	21492	D	encoded by transcript ACA1_013680A; uncharacterized protein	20440..>21492	Acanthamoeba castellanii str. Neff	14925066
ACA1_142940	CDS	ACA1_142940	NW_004457671.1	230	4256	R	encoded by transcript ACA1_142940A; RhoGEF domain containing protein	complement(join(<230..498,589..640,708..751,909..1011,1096..1155,1285..1393,1555..1704,1849..1971,2070..2133,2222..2377,2466..2547,2776..2837,2948..3086,3161..3257,3334..4019,4143..4256))	Acanthamoeba castellanii str. Neff	14925056
ACA1_143050	CDS	ACA1_143050	NW_004457671.1	9819	10643	R	encoded by transcript ACA1_143050A; uncharacterized protein	complement(join(9819..10107,10192..10382,10497..10643))	Acanthamoeba castellanii str. Neff	14925057
ACA1_143060	CDS	ACA1_143060	NW_004457671.1	12073	13314	D	encoded by transcript ACA1_143060A; uncharacterized protein	12073..13314	Acanthamoeba castellanii str. Neff	14924965
ACA1_143070	CDS	ACA1_143070	NW_004457671.1	13753	20026	D	encoded by transcript ACA1_143070A; ATPase, AAA domain containing protein	join(13753..13917,14015..14095,14213..14249,14362..14574,14830..14898,15002..15102,15611..15661,15775..16049,16878..16901,16996..17072,17153..17239,17390..17534,17636..17753,17812..17841,17964..18062,18164..18274,18409..18499,18593..18704,18797..18889,19033..19156,19272..19391,19469..19576,19687..19855,19953..20026)	Acanthamoeba castellanii str. Neff	14924966
ACA1_143280	CDS	ACA1_143280	NW_004457671.1	20307	20876	R	encoded by transcript ACA1_143280A; protein transport protein bet1, putative	complement(join(20307..20426,20511..20603,20724..>20876))	Acanthamoeba castellanii str. Neff	14924967
ACA1_143290	CDS	ACA1_143290	NW_004457671.1	21136	22616	R	encoded by transcript ACA1_143290A; uncharacterized protein	complement(join(21136..21969,22098..22370,22515..22616))	Acanthamoeba castellanii str. Neff	14924968
ACA1_143300	CDS	ACA1_143300	NW_004457671.1	22995	24517	R	encoded by transcript ACA1_143300A; mRNA capping enzyme, beta chain, putative	complement(join(22995..23358,23457..23632,23735..23803,23930..24049,24152..24232,24374..24517))	Acanthamoeba castellanii str. Neff	14924969
ACA1_143310	CDS	ACA1_143310	NW_004457671.1	24890	25213	D	encoded by transcript ACA1_143310A; ribosomal L29e protein family	join(24890..24991,25079..25213)	Acanthamoeba castellanii str. Neff	14924970
ACA1_143320	CDS	ACA1_143320	NW_004457671.1	25432	26328	R	encoded by transcript ACA1_143320A; uncharacterized protein	complement(join(25432..25625,25718..25864,25928..26037,26171..26328))	Acanthamoeba castellanii str. Neff	14924971
ACA1_143330	CDS	ACA1_143330	NW_004457671.1	26640	28231	D	encoded by transcript ACA1_143330A; uncharacterized protein	join(26640..26741,26966..27238,27440..28231)	Acanthamoeba castellanii str. Neff	14924972
ACA1_143440	CDS	ACA1_143440	NW_004457671.1	32012	32503	D	encoded by transcript ACA1_143440A; uncharacterized protein	32012..32503	Acanthamoeba castellanii str. Neff	14924973
ACA1_143550	CDS	ACA1_143550	NW_004457671.1	34826	36776	D	encoded by transcript ACA1_143550A; FF domain containing protein	join(<34826..34882,34987..35185,35279..35358,35498..35779,35905..36021,36137..36276,36385..36526,36657..36776)	Acanthamoeba castellanii str. Neff	14924974
ACA1_143560	CDS	ACA1_143560	NW_004457671.1	36863	37128	D	encoded by transcript ACA1_143560A; uncharacterized protein	join(36863..36933,36966..37128)	Acanthamoeba castellanii str. Neff	14924975
ACA1_143570	CDS	ACA1_143570	NW_004457671.1	37561	38609	D	encoded by transcript ACA1_143570A; uncharacterized protein	join(37561..37905,37989..38609)	Acanthamoeba castellanii str. Neff	14924976
ACA1_143580	CDS	ACA1_143580	NW_004457671.1	38657	46384	R	encoded by transcript ACA1_143580A; transcription mediator subunit med12 protein	complement(join(38657..39349,39457..40189,40266..40489,40577..40765,40863..41036,41136..41216,41322..41490,41597..41716,41803..42032,42125..42235,42320..42438,42533..42728,42869..42967,43120..43203,43267..43377,43497..43592,43702..44499,44607..44724,44802..44956,45086..45229,45409..45658,45776..46112,46300..46384))	Acanthamoeba castellanii str. Neff	14924977
ACA1_143590	CDS	ACA1_143590	NW_004457671.1	46921	48639	D	encoded by transcript ACA1_143590A; uncharacterized protein	join(46921..47049,47112..47141,47224..47258,47299..47408,47478..47559,47638..48411,48504..48639)	Acanthamoeba castellanii str. Neff	14924978
ACA1_143600	CDS	ACA1_143600	NW_004457671.1	48867	49332	D	encoded by transcript ACA1_143600A; uncharacterized protein	join(48867..48984,49072..49172,49249..49332)	Acanthamoeba castellanii str. Neff	14924979
ACA1_143610	CDS	ACA1_143610	NW_004457671.1	49417	50373	R	encoded by transcript ACA1_143610A; ribosomal protein S17, putative	complement(join(49417..49666,49774..49892,50041..50127,50236..50373))	Acanthamoeba castellanii str. Neff	14924980
ACA1_143620	CDS	ACA1_143620	NW_004457671.1	50720	54955	D	encoded by transcript ACA1_143620A; Sec23/Sec24 trunk domain containing protein	join(50720..51907,52005..52112,52204..52339,52444..52674,52720..52842,52940..53039,53141..53226,53411..53873,53981..54079,54157..54307,54461..54655,54785..54955)	Acanthamoeba castellanii str. Neff	14924981
ACA1_143630	CDS	ACA1_143630	NW_004457671.1	55081	56142	R	encoded by transcript ACA1_143630A; TolA protein	complement(55081..56142)	Acanthamoeba castellanii str. Neff	14924982
ACA1_143640	CDS	ACA1_143640	NW_004457671.1	56796	58021	D	encoded by transcript ACA1_143640A; uncharacterized protein	join(56796..57190,57300..57382,57509..57675,57797..58021)	Acanthamoeba castellanii str. Neff	14924983
ACA1_143650	CDS	ACA1_143650	NW_004457671.1	58249	60617	D	encoded by transcript ACA1_143650A; hydrolase, NUDIX domain containing protein	join(58249..58300,58376..58516,58839..58895,59034..59089,59245..59358,59469..59607,59743..59896,59982..60088,60289..60399,60469..60617)	Acanthamoeba castellanii str. Neff	14924984
ACA1_143660	CDS	ACA1_143660	NW_004457671.1	61582	66861	R	encoded by transcript ACA1_143660A; uncharacterized protein	complement(join(61582..61725,61916..62042,62168..62526,62631..62739,62854..62969,63088..63245,63361..63473,63677..63724,63848..63930,64020..64228,64312..64426,64552..64660,64768..64866,64956..65149,65236..65368,65531..65601,65740..65865,65981..66070,66101..66181,66265..66375,66481..66624,66739..66861))	Acanthamoeba castellanii str. Neff	14924985
ACA1_143670	CDS	ACA1_143670	NW_004457671.1	67264	67817	R	encoded by transcript ACA1_143670A; ribosomal protein S10p/S20e, putative	complement(join(67264..67636,67771..67817))	Acanthamoeba castellanii str. Neff	14924986
ACA1_143680	CDS	ACA1_143680	NW_004457671.1	67981	70862	D	encoded by transcript ACA1_143680A; uncharacterized protein	join(67981..69111,69219..69453,69544..69798,69894..70038,70141..70342,70434..70862)	Acanthamoeba castellanii str. Neff	14924987
ACA1_143690	CDS	ACA1_143690	NW_004457671.1	72499	74999	R	encoded by transcript ACA1_143690A; uncharacterized protein	complement(join(72499..72699,72894..73065,73236..73457,73540..73642,73732..73830,73945..74149,74250..74496,74605..74749,74831..74909,74949..74999))	Acanthamoeba castellanii str. Neff	14924988
ACA1_143700	CDS	ACA1_143700	NW_004457671.1	75094	78343	D	encoded by transcript ACA1_143700A; Ras subfamily protein	join(75094..75151,75251..75385,75488..75573,75715..75850,75938..76192,76278..76405,76550..76623,76973..77036,77124..77176,77290..77377,77477..77564,77646..77742,77830..77962,78103..78118,78198..78343)	Acanthamoeba castellanii str. Neff	14924989
ACA1_143710	CDS	ACA1_143710	NW_004457671.1	78838	79766	R	encoded by transcript ACA1_143710A; vesicle transport V-snare protein, putative	complement(join(78838..79011,79162..79257,79407..79484,79626..79766))	Acanthamoeba castellanii str. Neff	14924990
ACA1_143720	CDS	ACA1_143720	NW_004457671.1	80235	82572	D	encoded by transcript ACA1_143720A; fungal Zn(2)-Cys(6) binuclear cluster domain containing protein	join(80235..80368,80520..81194,81301..81456,81570..81678,81840..82040,82135..82572)	Acanthamoeba castellanii str. Neff	14924991
ACA1_143730	CDS	ACA1_143730	NW_004457671.1	83051	84072	R	encoded by transcript ACA1_143730A; uncharacterized protein	complement(join(83051..83823,83859..83872,84035..84072))	Acanthamoeba castellanii str. Neff	14924992
ACA1_143740	CDS	ACA1_143740	NW_004457671.1	84529	87586	R	encoded by transcript ACA1_143740A; Ankyrin repeatcontaining protein	complement(join(84529..84672,84764..84955,85087..85256,85393..85465,85541..85687,85770..85993,86057..86797,86969..87122,87289..87426,87506..87586))	Acanthamoeba castellanii str. Neff	14924993
ACA1_143750	CDS	ACA1_143750	NW_004457671.1	87875	88783	D	encoded by transcript ACA1_143750A; uncharacterized protein	join(87875..87990,88087..88783)	Acanthamoeba castellanii str. Neff	14924994
ACA1_143760	CDS	ACA1_143760	NW_004457671.1	88942	91884	R	encoded by transcript ACA1_143760A; uncharacterized protein	complement(join(88942..89270,89373..89465,89549..90343,90409..90574,90649..91761,91825..91884))	Acanthamoeba castellanii str. Neff	14924995
ACA1_143770	CDS	ACA1_143770	NW_004457671.1	93521	94499	D	encoded by transcript ACA1_143770A; WD repeatcontaining protein 40A, putative	join(<93521..93568,93780..93852,93911..93955,94035..94120,94181..94219,94281..94350,94465..94499)	Acanthamoeba castellanii str. Neff	14924996
ACA1_143780	CDS	ACA1_143780	NW_004457671.1	95653	97993	D	encoded by transcript ACA1_143780A; FGGAP repeat domain containing protein	join(95653..95664,95844..95973,96067..96210,96314..96434,96522..96661,96742..96891,96978..97124,97222..97416,97506..97637,97721..97869,97961..97993)	Acanthamoeba castellanii str. Neff	14924997
ACA1_143790	CDS	ACA1_143790	NW_004457671.1	98287	99366	D	encoded by transcript ACA1_143790A; ribosomal protein L24, putative	join(98287..98370,98495..98590,98675..98778,98896..99020,99119..99366)	Acanthamoeba castellanii str. Neff	14924998
ACA1_143800	CDS	ACA1_143800	NW_004457671.1	99508	100413	R	encoded by transcript ACA1_143800A; ribosome biogenesis protein nop16 protein	complement(join(99508..99780,99896..100002,100153..100202,100268..100413))	Acanthamoeba castellanii str. Neff	14924999
ACA1_143810	CDS	ACA1_143810	NW_004457671.1	102485	102813	R	encoded by transcript ACA1_143810A; uncharacterized protein	complement(join(102485..102701,102791..102813))	Acanthamoeba castellanii str. Neff	14925000
ACA1_143920	CDS	ACA1_143920	NW_004457671.1	105776	106828	D	encoded by transcript ACA1_143920A; nicalin, putative	join(<105776..105946,106020..106210,106300..106828)	Acanthamoeba castellanii str. Neff	14925001
ACA1_143930	CDS	ACA1_143930	NW_004457671.1	107169	109330	D	encoded by transcript ACA1_143930A; uncharacterized protein	join(107169..107280,107350..107548,107686..107901,107971..108070,108143..108247,108259..108360,108479..108527,108630..108838,108965..109030,109124..109330)	Acanthamoeba castellanii str. Neff	14925002
ACA1_143940	CDS	ACA1_143940	NW_004457671.1	109466	113220	R	encoded by transcript ACA1_143940A; type A von Willebrand factor (VWFA) domain containing protein	complement(join(109466..109576,109694..109794,109911..110006,110071..110164,110273..110488,110611..110742,110863..111196,111291..111487,111603..111760,111854..111941,112053..112194,112290..112447,112560..113091,113171..113220))	Acanthamoeba castellanii str. Neff	14925003
ACA1_143950	CDS	ACA1_143950	NW_004457671.1	113561	115761	R	encoded by transcript ACA1_143950A; homeobox domain containing protein	complement(join(113561..113653,113805..115440,115733..115761))	Acanthamoeba castellanii str. Neff	14925004
ACA1_143960	CDS	ACA1_143960	NW_004457671.1	116474	116958	D	encoded by transcript ACA1_143960A; 60s Acidic ribosomal protein	join(<116474..116569,116671..116958)	Acanthamoeba castellanii str. Neff	14925005
ACA1_143970	CDS	ACA1_143970	NW_004457671.1	117295	118977	D	encoded by transcript ACA1_143970A; cyclicAMP phosphodiesterase	join(117295..117565,117660..117826,117943..118089,118164..118343,118565..118842,118905..118977)	Acanthamoeba castellanii str. Neff	14925006
ACA1_143980	CDS	ACA1_143980	NW_004457671.1	119047	120407	R	encoded by transcript ACA1_143980A; uncharacterized protein	complement(join(119047..119140,119213..119373,119469..119798,119884..119988,120048..120067,120212..120284,120366..120407))	Acanthamoeba castellanii str. Neff	14925007
ACA1_143990	CDS	ACA1_143990	NW_004457671.1	120539	121783	R	encoded by transcript ACA1_143990A; Ras subfamily protein	complement(join(120539..120644,120782..120927,121000..121041,121120..121216,121309..121408,121496..121626,121710..121783))	Acanthamoeba castellanii str. Neff	14925008
ACA1_144000	CDS	ACA1_144000	NW_004457671.1	122471	126091	D	encoded by transcript ACA1_144000A; RhoGEF domain containing protein	join(<122471..122643,122733..122794,122894..122958,123030..123119,123193..123294,123382..123489,123603..123710,123799..123972,124246..124407,124477..124602,124686..124854,124950..125968,126053..126091)	Acanthamoeba castellanii str. Neff	14925009
ACA1_144020	CDS	ACA1_144020	NW_004457671.1	131827	134313	R	encoded by transcript ACA1_144020A; Fbox domain containing protein	complement(join(131827..132165,132294..132508,132619..132720,132835..132929,133026..133180,133257..133347,133437..133873,134116..134313))	Acanthamoeba castellanii str. Neff	14925011
ACA1_144030	CDS	ACA1_144030	NW_004457671.1	134550	135839	D	encoded by transcript ACA1_144030A; dual specificity phosphatase, catalytic domain containing protein	join(134550..134638,134763..134894,134980..135095,135191..135505,135598..135839)	Acanthamoeba castellanii str. Neff	14925012
ACA1_144040	CDS	ACA1_144040	NW_004457671.1	136356	136640	R	encoded by transcript ACA1_144040A; uncharacterized protein	complement(136356..136640)	Acanthamoeba castellanii str. Neff	14925013
ACA1_144050	CDS	ACA1_144050	NW_004457671.1	136831	139649	R	encoded by transcript ACA1_144050A; eukaryotic translation initiation factor SUI1 family protein	complement(join(136831..137037,137140..137314,137443..137625,137752..137901,137985..138515,138587..138715,138860..138977,139293..139443,139596..139649))	Acanthamoeba castellanii str. Neff	14925014
ACA1_144060	CDS	ACA1_144060	NW_004457671.1	139937	141949	D	encoded by transcript ACA1_144060A; vitamin Kdependent gamma-carboxylase	join(139937..139996,140069..140362,140519..140560,140768..141027,141222..141291,141320..141390,141485..141573,141681..141949)	Acanthamoeba castellanii str. Neff	14925015
ACA1_144070	CDS	ACA1_144070	NW_004457671.1	142102	144704	R	encoded by transcript ACA1_144070A; uncharacterized protein	complement(join(142102..142267,142359..142464,142610..142774,142898..143003,143212..143311,143409..143646,143703..143845,143950..144006,144071..144318,144387..144704))	Acanthamoeba castellanii str. Neff	14925016
ACA1_144080	CDS	ACA1_144080	NW_004457671.1	145547	148632	D	encoded by transcript ACA1_144080A; uncharacterized protein	join(145547..145736,145842..146456,146557..146696,146815..147006,147118..147235,147323..147431,147518..147575,147641..147763,147890..147956,148166..148308,148408..148632)	Acanthamoeba castellanii str. Neff	14925017
ACA1_144090	CDS	ACA1_144090	NW_004457671.1	148664	150539	R	encoded by transcript ACA1_144090A; WH2 motif domain containing protein	complement(join(148664..148736,148795..149057,149131..149201,149244..149726,149837..149972,150053..150153,150251..150365,150450..150539))	Acanthamoeba castellanii str. Neff	14925018
ACA1_144100	CDS	ACA1_144100	NW_004457671.1	150751	151763	R	encoded by transcript ACA1_144100A; uncharacterized protein	complement(join(150751..150917,151011..151076,151205..151763))	Acanthamoeba castellanii str. Neff	14925019
ACA1_144110	CDS	ACA1_144110	NW_004457671.1	151977	154005	D	encoded by transcript ACA1_144110A; erythronate4-phosphate dehydrogenase domain containing protein	join(151977..152250,152344..152423,152514..152594,152669..152750,152834..152923,153020..153112,153202..153283,153490..153587,153661..153742,153837..153861,153931..154005)	Acanthamoeba castellanii str. Neff	14925020
ACA1_144120	CDS	ACA1_144120	NW_004457671.1	154320	157253	D	encoded by transcript ACA1_144120A; protein kinase domain containing protein	join(154320..154442,154560..154651,154768..154894,155331..155430,155520..155562,155673..155785,155891..155964,156030..156294,156328..157253)	Acanthamoeba castellanii str. Neff	14925021
ACA1_144130	CDS	ACA1_144130	NW_004457671.1	157447	158055	D	encoded by transcript ACA1_144130A; NADPH-dependent FMN reductase domain containing protein	157447..158055	Acanthamoeba castellanii str. Neff	14925022
ACA1_144140	CDS	ACA1_144140	NW_004457671.1	158101	158475	R	encoded by transcript ACA1_144140A; uncharacterized protein	complement(158101..158475)	Acanthamoeba castellanii str. Neff	14925023
ACA1_144150	CDS	ACA1_144150	NW_004457671.1	158592	158852	R	encoded by transcript ACA1_144150A; uncharacterized protein	complement(158592..158852)	Acanthamoeba castellanii str. Neff	14925024
ACA1_144160	CDS	ACA1_144160	NW_004457671.1	160752	164113	R	encoded by transcript ACA1_144160A; nucleoporin autopeptidase	complement(join(160752..162757,162851..163070,163188..163675,163803..163946,164083..164113))	Acanthamoeba castellanii str. Neff	14925025
ACA1_144170	CDS	ACA1_144170	NW_004457671.1	164661	166181	D	encoded by transcript ACA1_144170A; uncharacterized protein	join(164661..164685,164753..164823,165117..165305,165387..165488,165591..166181)	Acanthamoeba castellanii str. Neff	14925026
ACA1_144180	CDS	ACA1_144180	NW_004457671.1	166449	166898	D	encoded by transcript ACA1_144180A; phenazine biosynthesis protein, putative	166449..166898	Acanthamoeba castellanii str. Neff	14925027
ACA1_144190	CDS	ACA1_144190	NW_004457671.1	167240	169358	D	encoded by transcript ACA1_144190A; uncharacterized protein	join(167240..167812,167953..168032,168149..168245,168342..168423,168512..168575,168670..168791,168925..169358)	Acanthamoeba castellanii str. Neff	14925028
ACA1_144200	CDS	ACA1_144200	NW_004457671.1	169524	171712	D	encoded by transcript ACA1_144200A; PH domain containing protein	join(169524..169652,169793..169867,170035..170140,170254..170745,170842..170918,170996..171081,171161..171252,171336..171712)	Acanthamoeba castellanii str. Neff	14925029
ACA1_144210	CDS	ACA1_144210	NW_004457671.1	171952	172876	R	encoded by transcript ACA1_144210A; uncharacterized protein	complement(join(171952..172007,172109..172212,172319..172483,172602..172679,172776..172876))	Acanthamoeba castellanii str. Neff	14925030
ACA1_144220	CDS	ACA1_144220	NW_004457671.1	173083	174995	R	encoded by transcript ACA1_144220A; uncharacterized protein	complement(join(173083..173961,174090..174191,174323..174375,174478..174675,174827..174995))	Acanthamoeba castellanii str. Neff	14925031
ACA1_144230	CDS	ACA1_144230	NW_004457671.1	175413	180678	D	encoded by transcript ACA1_144230A; Rap/ranGAP domain containing protein	join(175413..175532,175556..175591,175671..175773,175947..175986,176291..176481,176574..176795,176872..177011,177095..177406,177460..177600,177683..177914,178098..178304,178412..178495,178595..178656,178772..178930,179032..179133,179252..179324,179401..179499,179594..179639,179718..179835,179968..180059,180169..180275,180354..180480,180591..180678)	Acanthamoeba castellanii str. Neff	14925032
ACA1_144240	CDS	ACA1_144240	NW_004457671.1	180815	181501	D	encoded by transcript ACA1_144240A; uncharacterized protein	180815..181501	Acanthamoeba castellanii str. Neff	14925033
ACA1_144250	CDS	ACA1_144250	NW_004457671.1	181679	187088	R	encoded by transcript ACA1_144250A; SH2 domain containing protein	complement(join(181679..181853,181951..182075,182152..182277,182386..183039,183121..183200,183307..183524,183609..183702,183792..183842,183933..184000,184241..184353,184496..184573,184679..184769,184871..184968,185077..185166,185241..185352,185456..185569,185707..185835,185984..186066,186246..186347,186495..187088))	Acanthamoeba castellanii str. Neff	14925034
ACA1_144260	CDS	ACA1_144260	NW_004457671.1	187922	188182	D	encoded by transcript ACA1_144260A; uncharacterized protein	187922..188182	Acanthamoeba castellanii str. Neff	14925035
ACA1_144270	CDS	ACA1_144270	NW_004457671.1	188823	193985	D	encoded by transcript ACA1_144270A; SacI domain containing protein	join(188823..188930,189097..189198,189349..189462,189602..189744,189839..189937,190068..190195,190292..190398,190584..190701,190810..191041,191160..191267,191376..191490,191568..191693,191830..192080,192181..192472,192590..192682,192771..192877,193022..193127,193194..193297,193434..193545,193767..193868,193980..193985)	Acanthamoeba castellanii str. Neff	14925036
ACA1_144280	CDS	ACA1_144280	NW_004457671.1	194365	195276	D	encoded by transcript ACA1_144280A; uncharacterized protein	194365..195276	Acanthamoeba castellanii str. Neff	14925037
ACA1_144290	CDS	ACA1_144290	NW_004457671.1	195656	196989	D	encoded by transcript ACA1_144290A; BSD domain containing protein	join(195656..195748,195949..196088,196241..196467,196631..196989)	Acanthamoeba castellanii str. Neff	14925038
ACA1_144300	CDS	ACA1_144300	NW_004457671.1	197151	199276	R	encoded by transcript ACA1_144300A; RNA recognition motif domain containing protein	complement(join(197151..197239,197315..197578,197696..197868,197989..198125,198258..198282,198431..198495,198627..198671,198802..198894,199013..199276))	Acanthamoeba castellanii str. Neff	14925039
ACA1_144310	CDS	ACA1_144310	NW_004457671.1	199466	202075	D	encoded by transcript ACA1_144310A; ubiquitin fusion degradation protein ufd1 protein	join(199466..199492,199594..199666,199746..199838,199960..200030,200120..200192,200388..200451,200559..200602,200675..200817,200937..201056,201152..201285,201390..201466,201550..201613,201718..201784,201867..201917,201998..202075)	Acanthamoeba castellanii str. Neff	14925040
ACA1_144320	CDS	ACA1_144320	NW_004457671.1	202715	204597	D	encoded by transcript ACA1_144320A; ankyrin 2,3/unc44, putative	join(202715..202760,202838..202863,202996..203141,203224..203419,203503..203655,203750..203893,203970..204152,204215..204331,204436..204597)	Acanthamoeba castellanii str. Neff	14925041
ACA1_144330	CDS	ACA1_144330	NW_004457671.1	204716	209442	R	encoded by transcript ACA1_144330A; GTPase-activator protein for Ras family GTPase	complement(join(204716..204831,204915..205044,205131..205238,205319..205383,205686..205765,205912..205985,206203..206272,206456..206534,206657..206747,206892..206963,207085..207246,207389..207497,207567..207750,207841..209004,209241..209442))	Acanthamoeba castellanii str. Neff	14925042
ACA1_144340	CDS	ACA1_144340	NW_004457671.1	210063	212496	D	encoded by transcript ACA1_144340A; uncharacterized protein	join(210063..210236,210417..210487,210660..210762,210870..211275,211417..211518,211599..211812,211897..211994,212093..212496)	Acanthamoeba castellanii str. Neff	14925043
ACA1_144350	CDS	ACA1_144350	NW_004457671.1	212570	214134	D	encoded by transcript ACA1_144350A; nitrilase 1 isoform 1, putative	join(212570..212705,212788..212889,212980..213014,213164..213275,213362..213427,213477..213705,213780..213861,213937..214134)	Acanthamoeba castellanii str. Neff	14925044
ACA1_144360	CDS	ACA1_144360	NW_004457671.1	214725	215744	D	encoded by transcript ACA1_144360A; repressor of rna polymerase iii transcription, putative	join(214725..214827,215000..215192,215303..215515,215591..215744)	Acanthamoeba castellanii str. Neff	14925045
ACA1_144370	CDS	ACA1_144370	NW_004457671.1	215991	218148	D	encoded by transcript ACA1_144370A; uncharacterized protein	join(215991..216027,216143..216394,216476..217226,217354..217459,217528..217795,217871..218148)	Acanthamoeba castellanii str. Neff	14925046
ACA1_144380	CDS	ACA1_144380	NW_004457671.1	219905	226392	D	encoded by transcript ACA1_144380A; S1 RNA binding domain containing protein	join(219905..220085,220294..220553,220664..220828,220966..221287,221383..221582,221723..222028,222153..222315,222429..222650,222765..222926,223043..223440,223530..223706,223818..223986,224118..224261,224418..224741,224941..225150,225241..225450,225597..225874,226038..226149,226259..226392)	Acanthamoeba castellanii str. Neff	14925047
ACA1_144390	CDS	ACA1_144390	NW_004457671.1	226540	228495	R	encoded by transcript ACA1_144390A; leucine rich repeat domain containing protein	complement(join(226540..226797,226944..227249,227380..227459,227631..227671,227817..228077,228368..228495))	Acanthamoeba castellanii str. Neff	14925048
ACA1_144400	CDS	ACA1_144400	NW_004457671.1	228627	234304	R	encoded by transcript ACA1_144400A; WD repeat protein WDR3, putative	complement(join(228627..228833,229001..229145,229307..229492,229628..229797,229921..230072,230253..230397,230532..230768,230971..231139,231303..231510,231632..231926,232113..232213,232356..232614,232762..232908,233137..233284,233554..233736,234024..234304))	Acanthamoeba castellanii str. Neff	14925049
ACA1_144420	CDS	ACA1_144420	NW_004457671.1	238346	239933	D	encoded by transcript ACA1_144420A; uncharacterized protein	join(238346..238479,238590..238797,239000..239111,239502..239638,239784..239933)	Acanthamoeba castellanii str. Neff	14925051
ACA1_144430	CDS	ACA1_144430	NW_004457671.1	240032	243251	R	encoded by transcript ACA1_144430A; protein casp, putative	complement(join(240032..240217,240385..240637,240733..241010,241170..241307,241486..241656,241804..241994,242160..242274,242334..242516,242793..242953,243050..243175,243224..243251))	Acanthamoeba castellanii str. Neff	14925052
ACA1_144440	CDS	ACA1_144440	NW_004457671.1	243463	246622	D	encoded by transcript ACA1_144440A; SNF2 family Nterminal domain containing protein	join(243463..243553,243629..243805,243954..244330,244448..244650,244860..245211,245381..246622)	Acanthamoeba castellanii str. Neff	14925053
ACA1_144450	CDS	ACA1_144450	NW_004457671.1	246964	250705	D	encoded by transcript ACA1_144450A; protein kinase domain containing protein	join(246964..247042,247113..247232,247410..247624,247758..248555,248689..248796,248981..249214,249516..249671,249843..250149,250275..250705)	Acanthamoeba castellanii str. Neff	14925054
ACA1_144460	CDS	ACA1_144460	NW_004457671.1	254572	255675	D	encoded by transcript ACA1_144460A; uncharacterized protein	join(254572..254688,254764..254815,254926..255127,255573..255675)	Acanthamoeba castellanii str. Neff	14925055
ACA1_025200	CDS	ACA1_025200	NW_004457670.1	1490	2776	D	encoded by transcript ACA1_025200A; uncharacterized protein	join(<1490..1660,1744..1919,2024..2321,2470..2650,2742..2776)	Acanthamoeba castellanii str. Neff	14924964
ACA1_025410	CDS	ACA1_025410	NW_004457670.1	12506	16263	D	encoded by transcript ACA1_025410A; serine/threonine protein kinase	join(12506..12621,12653..13193,13262..13378,13477..13635,13722..14072,14141..14306,14378..15463,15562..15867,15959..16263)	Acanthamoeba castellanii str. Neff	14924962
ACA1_074390	CDS	ACA1_074390	NW_004457669.1	1	90	R	encoded by transcript ACA1_074390A; uncharacterized protein	complement(<1..90)	Acanthamoeba castellanii str. Neff	14924961
ACA1_074400	CDS	ACA1_074400	NW_004457669.1	364	1769	R	encoded by transcript ACA1_074400A; uncharacterized protein	complement(join(364..537,623..850,929..1128,1219..1542,1619..1769))	Acanthamoeba castellanii str. Neff	14924870
ACA1_074410	CDS	ACA1_074410	NW_004457669.1	2122	4099	D	encoded by transcript ACA1_074410A; cysteine synthase	join(2122..2378,2520..2632,2747..2854,2955..2986,3097..3264,3327..3430,3562..3692,3781..3894,3978..4099)	Acanthamoeba castellanii str. Neff	14924891
ACA1_074420	CDS	ACA1_074420	NW_004457669.1	4226	8946	R	encoded by transcript ACA1_074420A; Putative N6adenosine-methyltransferase	complement(join(4226..4397,4478..4577,4670..4787,4883..4959,5037..5114,5208..5409,5515..5682,5780..5914,6019..6182,6261..6417,6506..6608,6698..6926,7009..7846,7929..8212,8258..8416,8727..8946))	Acanthamoeba castellanii str. Neff	14924892
ACA1_074430	CDS	ACA1_074430	NW_004457669.1	9833	11575	D	encoded by transcript ACA1_074430A; uncharacterized protein	join(9833..9992,10079..10189,10269..10394,10485..11575)	Acanthamoeba castellanii str. Neff	14924893
ACA1_074440	CDS	ACA1_074440	NW_004457669.1	12025	13378	R	encoded by transcript ACA1_074440A; RFX DNAbinding domain containing protein	complement(join(12025..12802,12938..13037,13115..13203,13266..13378))	Acanthamoeba castellanii str. Neff	14924894
ACA1_074450	CDS	ACA1_074450	NW_004457669.1	14458	17051	R	encoded by transcript ACA1_074450A; galactokinase	complement(join(14458..14535,14622..14721,14809..14903,14990..15069,15155..15280,15387..15490,15591..15713,15852..15947,16050..16192,16282..16361,16451..16693,16767..16855,16957..17051))	Acanthamoeba castellanii str. Neff	14924895
ACA1_074460	CDS	ACA1_074460	NW_004457669.1	17306	21474	D	encoded by transcript ACA1_074460A; RNA recognition domain containing protein	join(17306..17370,17449..17570,17633..18340,18539..18565,18652..18855,18951..19220,19315..19499,19592..19768,19855..20019,20103..20589,20685..20786,20865..21070,21154..21276,21358..21474)	Acanthamoeba castellanii str. Neff	14924896
ACA1_074470	CDS	ACA1_074470	NW_004457669.1	22089	23218	R	encoded by transcript ACA1_074470A; chromatin associated protein kti12 protein	complement(join(22089..22753,22834..23218))	Acanthamoeba castellanii str. Neff	14924897
ACA1_074480	CDS	ACA1_074480	NW_004457669.1	23290	23890	D	encoded by transcript ACA1_074480A; uncharacterized protein	join(23290..23377,23590..23693,23774..23890)	Acanthamoeba castellanii str. Neff	14924898
ACA1_074490	CDS	ACA1_074490	NW_004457669.1	24108	24829	D	encoded by transcript ACA1_074490A; ATP synthase mitochondrial F1 complex assembly factor 2, putative	join(24108..24360,24441..24514,24527..24598,24683..24829)	Acanthamoeba castellanii str. Neff	14924899
ACA1_074500	CDS	ACA1_074500	NW_004457669.1	24836	25453	D	encoded by transcript ACA1_074500A; ATP synthase mitochondrial F1 complex assembly factor 2	join(24836..25043,25110..25184,25269..25453)	Acanthamoeba castellanii str. Neff	14924900
ACA1_074510	CDS	ACA1_074510	NW_004457669.1	25550	28052	D	encoded by transcript ACA1_074510A; spinocerbellar ataxia type 10 family protein	join(25550..25718,25798..25906,25973..26161,26259..26807,26904..26969,27061..27135,27156..27361,27508..27653,27742..27805,27874..28052)	Acanthamoeba castellanii str. Neff	14924901
ACA1_074520	CDS	ACA1_074520	NW_004457669.1	28152	31096	D	encoded by transcript ACA1_074520A; SH3 domain containing protein	join(28152..28303,28411..28607,28749..28892,29039..29214,29298..29376,29455..29563,29637..29764,29873..30026,30108..30180,30210..30410,30486..30608,30860..31096)	Acanthamoeba castellanii str. Neff	14924902
ACA1_074530	CDS	ACA1_074530	NW_004457669.1	31172	32003	R	encoded by transcript ACA1_074530A; Endonuclease/exonuclease/phosphatase family protein	complement(join(31172..31315,31408..31500,31614..32003))	Acanthamoeba castellanii str. Neff	14924871
ACA1_074540	CDS	ACA1_074540	NW_004457669.1	32208	39609	D	encoded by transcript ACA1_074540A; C2 calcium/lipidbinding (CaLB) region-containing protein	join(32208..32516,32645..32751,32900..32930,33018..33070,33136..33253,33377..36131,36217..36377,36448..36510,36567..36893,37127..38041,38116..38488,38576..38680,38789..38946,39057..39166,39254..39400,39483..39609)	Acanthamoeba castellanii str. Neff	14924872
ACA1_074550	CDS	ACA1_074550	NW_004457669.1	41931	45910	R	encoded by transcript ACA1_074550A; Activating signal cointegrator protein	complement(join(41931..42050,42123..43049,43120..43476,43489..43930,44015..44237,44363..44530,44664..44802,44937..45157,45180..45397,45445..45632,45743..45910))	Acanthamoeba castellanii str. Neff	14924873
ACA1_074560	CDS	ACA1_074560	NW_004457669.1	46062	46577	D	encoded by transcript ACA1_074560A; uncharacterized protein	46062..46577	Acanthamoeba castellanii str. Neff	14924874
ACA1_074570	CDS	ACA1_074570	NW_004457669.1	46660	47145	R	encoded by transcript ACA1_074570A; CHCH domain containing protein	complement(46660..47145)	Acanthamoeba castellanii str. Neff	14924875
ACA1_074580	CDS	ACA1_074580	NW_004457669.1	47631	48466	D	encoded by transcript ACA1_074580A; Ras-related protein Rab-7A	join(47631..47823,47962..48041,48096..48307,48391..48466)	Acanthamoeba castellanii str. Neff	14924876
ACA1_074590	CDS	ACA1_074590	NW_004457669.1	49800	50274	R	encoded by transcript ACA1_074590A; NUDIX hydrolase	complement(join(49800..49872,49942..50089,50181..50274))	Acanthamoeba castellanii str. Neff	14924877
ACA1_074600	CDS	ACA1_074600	NW_004457669.1	50465	53221	R	encoded by transcript ACA1_074600A; leucine rich repeat domain containing protein	complement(join(50465..50532,50603..50697,50840..50923,51037..51162,51244..51352,51426..51639,51733..51844,51941..52072,52161..52429,52523..52895,53130..53221))	Acanthamoeba castellanii str. Neff	14924878
ACA1_074610	CDS	ACA1_074610	NW_004457669.1	53324	54071	R	encoded by transcript ACA1_074610A; uncharacterized protein	complement(join(53324..53355,53460..53616,53707..53786,53861..54071))	Acanthamoeba castellanii str. Neff	14924879
ACA1_074620	CDS	ACA1_074620	NW_004457669.1	54465	54850	R	encoded by transcript ACA1_074620A; uncharacterized protein	complement(join(54465..54563,54650..54850))	Acanthamoeba castellanii str. Neff	14924880
ACA1_074630	CDS	ACA1_074630	NW_004457669.1	55148	55838	R	encoded by transcript ACA1_074630A; histidine triad domain containing protein	complement(join(55148..55344,55413..55520,55588..55707,55766..55838))	Acanthamoeba castellanii str. Neff	14924881
ACA1_074640	CDS	ACA1_074640	NW_004457669.1	56084	57208	D	encoded by transcript ACA1_074640A; CBS domain containing protein	56084..57208	Acanthamoeba castellanii str. Neff	14924882
ACA1_074650	CDS	ACA1_074650	NW_004457669.1	57572	59143	R	encoded by transcript ACA1_074650A; actinrelated protein 2, putative	complement(join(57572..58087,58240..58473,58607..58743,58864..59143))	Acanthamoeba castellanii str. Neff	14924883
ACA1_074660	CDS	ACA1_074660	NW_004457669.1	59869	60518	D	encoded by transcript ACA1_074660A; uncharacterized protein	join(59869..59965,60042..60129,60212..60518)	Acanthamoeba castellanii str. Neff	14924884
ACA1_074670	CDS	ACA1_074670	NW_004457669.1	60615	62228	R	encoded by transcript ACA1_074670A; arginase	complement(join(60615..60687,60759..60808,60880..60960,61042..61101,61237..61358,61431..61534,61608..61686,61789..61886,61958..62033,62105..62228))	Acanthamoeba castellanii str. Neff	14924885
ACA1_074680	CDS	ACA1_074680	NW_004457669.1	62385	63454	D	encoded by transcript ACA1_074680A; ribosomal protein l7/l12 cterminal domain containing protein	join(62385..62454,62575..62642,62721..63227,63338..63454)	Acanthamoeba castellanii str. Neff	14924886
ACA1_074690	CDS	ACA1_074690	NW_004457669.1	63748	65145	D	encoded by transcript ACA1_074690A; uncharacterized protein	join(63748..63821,63843..64101,64198..64338,64407..64485,64611..64690,64762..64986,65104..65145)	Acanthamoeba castellanii str. Neff	14924887
ACA1_074700	CDS	ACA1_074700	NW_004457669.1	65283	66596	R	encoded by transcript ACA1_074700A; uncharacterized protein	complement(join(65283..65538,65639..65750,65852..65961,66043..66156,66251..66305,66452..66596))	Acanthamoeba castellanii str. Neff	14924888
ACA1_074710	CDS	ACA1_074710	NW_004457669.1	66960	71663	D	encoded by transcript ACA1_074710A; RhoGAP domain containing protein	join(66960..67349,67574..68830,68905..69299,69379..69426,69510..69606,69695..70202,70304..70432,70513..70594,70700..70784,70857..70946,71041..71106,71193..71348,71526..71663)	Acanthamoeba castellanii str. Neff	14924889
ACA1_074720	CDS	ACA1_074720	NW_004457669.1	71876	73050	D	encoded by transcript ACA1_074720A; cytidylyltransferase domain containing protein	join(71876..72017,72104..72147,72229..72380,72529..72580,72690..72809,72877..73050)	Acanthamoeba castellanii str. Neff	14924890
ACA1_074730	CDS	ACA1_074730	NW_004457669.1	73223	74023	R	encoded by transcript ACA1_074730A; uncharacterized protein	complement(join(73223..73300,73390..73461,73549..73740,73802..74023))	Acanthamoeba castellanii str. Neff	14924903
ACA1_074740	CDS	ACA1_074740	NW_004457669.1	74510	76175	R	encoded by transcript ACA1_074740A; thioredoxin domain containing protein	complement(join(74510..74663,74758..74863,74970..75041,75160..75281,75385..75698,75778..75936,76059..76175))	Acanthamoeba castellanii str. Neff	14924904
ACA1_074750	CDS	ACA1_074750	NW_004457669.1	76307	76875	R	encoded by transcript ACA1_074750A; 5formyltetrahydrofolate cyclo-ligase subfamily protein	complement(join(76307..76422,76527..76682,76767..76875))	Acanthamoeba castellanii str. Neff	14924905
ACA1_074760	CDS	ACA1_074760	NW_004457669.1	77474	78938	D	encoded by transcript ACA1_074760A; signalosome complex protein	join(77474..77610,77742..77793,77866..78177,78257..78379,78464..78604,78675..78938)	Acanthamoeba castellanii str. Neff	14924906
ACA1_074770	CDS	ACA1_074770	NW_004457669.1	79076	83597	R	encoded by transcript ACA1_074770A; Vps52 / Sac2 family protein	complement(join(79076..79150,79230..79311,79441..79540,79654..79786,79893..80024,80110..80292,80385..80468,80571..80641,80734..80841,81001..81111,81203..81302,81413..81522,81605..81743,81828..81917,82027..82089,82189..82336,82424..82485,82564..82675,82755..82846,82936..83019,83104..83126,83216..83279,83373..83597))	Acanthamoeba castellanii str. Neff	14924907
ACA1_074780	CDS	ACA1_074780	NW_004457669.1	84477	85226	D	encoded by transcript ACA1_074780A; RhoGAP domain containing protein	join(84477..84546,84714..84791,84860..84988,85054..85226)	Acanthamoeba castellanii str. Neff	14924908
ACA1_074790	CDS	ACA1_074790	NW_004457669.1	85270	86350	D	encoded by transcript ACA1_074790A; uncharacterized protein	join(85270..85413,85475..85543,85853..86350)	Acanthamoeba castellanii str. Neff	14924909
ACA1_074800	CDS	ACA1_074800	NW_004457669.1	86748	87709	R	encoded by transcript ACA1_074800A; tetraspanning membrane protein, SFT2like protein	complement(join(86748..86820,86909..86967,87039..87156,87238..87311,87385..87514,87594..87709))	Acanthamoeba castellanii str. Neff	14924910
ACA1_074810	CDS	ACA1_074810	NW_004457669.1	87891	91137	D	encoded by transcript ACA1_074810A; PA domain containing protein	join(87891..87924,87941..88115,88266..88369,88446..88570,88646..88724,88796..88864,88942..89085,89152..89245,89312..89406,89470..89597,89687..89820,89937..89969,90109..90119,90199..90388,90441..90562,90655..90776,90862..90906,91000..91137)	Acanthamoeba castellanii str. Neff	14924911
ACA1_074820	CDS	ACA1_074820	NW_004457669.1	91421	94770	D	encoded by transcript ACA1_074820A; uncharacterized protein	join(91421..91553,91598..91716,91787..91928,92018..92109,92180..92267,92371..92457,92534..92617,92786..92987,93116..93383,93407..93779,93907..94149,94259..94561,94622..94770)	Acanthamoeba castellanii str. Neff	14924912
ACA1_074830	CDS	ACA1_074830	NW_004457669.1	94843	98044	R	encoded by transcript ACA1_074830A; carboxylesterase	complement(join(94843..94920,95031..95122,95358..95487,95597..95713,95817..95919,96112..96244,96325..96440,96575..96723,96981..97121,97224..97352,97434..97671,97750..97888,97960..98044))	Acanthamoeba castellanii str. Neff	14924913
ACA1_074840	CDS	ACA1_074840	NW_004457669.1	98201	102840	D	encoded by transcript ACA1_074840A; Lecithin:cholesterol acyltransferase	join(98201..98571,98582..98675,98793..98921,99025..99057,99295..99356,99793..99888,99964..100079,100240..100476,100598..100729,100859..101492,101649..101986,102103..102189,102288..102402,102537..102629,102747..102840)	Acanthamoeba castellanii str. Neff	14924914
ACA1_074850	CDS	ACA1_074850	NW_004457669.1	102964	104279	R	encoded by transcript ACA1_074850A; uncharacterized protein	complement(join(102964..103380,103483..103553,103743..103799,103862..103944,104028..104093,104215..104279))	Acanthamoeba castellanii str. Neff	14924915
ACA1_074860	CDS	ACA1_074860	NW_004457669.1	104548	105869	D	encoded by transcript ACA1_074860A; dual specificity phosphatase, catalytic domain containing protein	join(104548..104719,104843..104937,105004..105111,105379..105450,105557..105650,105757..105869)	Acanthamoeba castellanii str. Neff	14924916
ACA1_074870	CDS	ACA1_074870	NW_004457669.1	105960	106847	R	encoded by transcript ACA1_074870A; NUDIX hydrolase	complement(join(105960..106169,106262..106383,106471..106535,106600..106847))	Acanthamoeba castellanii str. Neff	14924917
ACA1_074880	CDS	ACA1_074880	NW_004457669.1	107610	108328	R	encoded by transcript ACA1_074880A; uncharacterized protein	complement(join(107610..107704,107792..107867,108020..108328))	Acanthamoeba castellanii str. Neff	14924918
ACA1_074890	CDS	ACA1_074890	NW_004457669.1	108466	110187	D	encoded by transcript ACA1_074890A; uncharacterized protein	join(108466..108631,108788..109599,109677..109883,110017..110187)	Acanthamoeba castellanii str. Neff	14924919
ACA1_074900	CDS	ACA1_074900	NW_004457669.1	110362	111457	R	encoded by transcript ACA1_074900A; E3 SUMOprotein ligase NSE2, putative	complement(join(110362..110492,110617..110681,110803..110930,110995..111105,111162..111263,111329..111457))	Acanthamoeba castellanii str. Neff	14924920
ACA1_074910	CDS	ACA1_074910	NW_004457669.1	111627	111959	D	encoded by transcript ACA1_074910A; uncharacterized protein	join(111627..111765,111835..111959)	Acanthamoeba castellanii str. Neff	14924921
ACA1_074920	CDS	ACA1_074920	NW_004457669.1	112262	113632	D	encoded by transcript ACA1_074920A; OTUlike cysteine protease	join(112262..112333,112394..112604,112678..112742,112845..113004,113070..113248,113330..113632)	Acanthamoeba castellanii str. Neff	14924922
ACA1_074930	CDS	ACA1_074930	NW_004457669.1	114094	116061	D	encoded by transcript ACA1_074930A; calponin domain containing protein	join(114094..114168,114246..114327,114570..114734,114830..114916,114991..115147,115227..115305,115382..115506,115589..115913,115987..116061)	Acanthamoeba castellanii str. Neff	14924923
ACA1_074940	CDS	ACA1_074940	NW_004457669.1	116600	117196	D	encoded by transcript ACA1_074940A; uncharacterized protein	join(116600..116719,116791..116901,116975..117196)	Acanthamoeba castellanii str. Neff	14924924
ACA1_074960	CDS	ACA1_074960	NW_004457669.1	119272	120116	R	encoded by transcript ACA1_074960A; eukaryotic translation initiation factor 3 subunit 1like protein	complement(join(119272..119502,119586..120116))	Acanthamoeba castellanii str. Neff	14924926
ACA1_074970	CDS	ACA1_074970	NW_004457669.1	120400	121431	D	encoded by transcript ACA1_074970A; stressinducible protein STI1-like, putative	join(120400..120624,120727..120897,120963..121054,121143..121431)	Acanthamoeba castellanii str. Neff	14924927
ACA1_074980	CDS	ACA1_074980	NW_004457669.1	121568	123395	D	encoded by transcript ACA1_074980A; TBC domain containing protein	join(121568..121667,121737..121817,121898..122009,122025..122193,122263..122349,122436..122594,122684..122778,122861..122911,123056..123191,123291..123395)	Acanthamoeba castellanii str. Neff	14924928
ACA1_074990	CDS	ACA1_074990	NW_004457669.1	123876	125535	D	encoded by transcript ACA1_074990A; protein kinase domain containing protein	join(123876..124101,124212..124727,124812..124879,124960..125535)	Acanthamoeba castellanii str. Neff	14924929
ACA1_075000	CDS	ACA1_075000	NW_004457669.1	125676	125963	D	encoded by transcript ACA1_075000A; uncharacterized protein	join(125676..125880,125893..125963)	Acanthamoeba castellanii str. Neff	14924930
ACA1_075010	CDS	ACA1_075010	NW_004457669.1	126201	127057	R	encoded by transcript ACA1_075010A; Ras family protein	complement(join(126201..126291,126364..126527,126616..126803,126876..126944,127006..127057))	Acanthamoeba castellanii str. Neff	14924931
ACA1_075020	CDS	ACA1_075020	NW_004457669.1	127698	128812	R	encoded by transcript ACA1_075020A; Rab7, putative	complement(join(127698..127782,127872..128035,128138..128325,128393..128461,128561..128601,128757..128812))	Acanthamoeba castellanii str. Neff	14924932
ACA1_075030	CDS	ACA1_075030	NW_004457669.1	129188	132081	D	encoded by transcript ACA1_075030A; serine carboxypeptidase	join(129188..129316,129403..129440,129527..129588,129691..129768,129896..129995,130133..130224,130395..130520,130605..130677,130791..130903,131064..131107,131210..131293,131370..131508,131571..131625,131769..132081)	Acanthamoeba castellanii str. Neff	14924933
ACA1_075040	CDS	ACA1_075040	NW_004457669.1	132280	136759	R	encoded by transcript ACA1_075040A; RhoGEF domain containing protein	complement(join(132280..132418,132494..132645,132885..132938,133008..133099,133215..133289,133430..133576,133672..133788,133863..133992,134125..134190,134332..134487,134597..134704,134877..135017,135155..135318,135393..135492,135610..135820,136042..136124,136285..136407,136682..136759))	Acanthamoeba castellanii str. Neff	14924934
ACA1_075050	CDS	ACA1_075050	NW_004457669.1	137215	142778	D	encoded by transcript ACA1_075050A; WD domain, G-beta repeat-containing protein	join(137215..137338,137560..137666,138077..138151,138246..138318,138415..138568,138639..138784,138914..139065,139155..139228,139364..139662,139833..140088,140185..140261,140356..140423,140501..140603,140676..140851,141011..141145,141252..141363,141483..141586,141657..141785,141882..142020,142135..142288,142370..142463,142528..142636,142759..142778)	Acanthamoeba castellanii str. Neff	14924935
ACA1_075160	CDS	ACA1_075160	NW_004457669.1	142905	143395	R	encoded by transcript ACA1_075160A; RNA recognition motif domain containing protein	complement(join(142905..143116,143194..143395))	Acanthamoeba castellanii str. Neff	14924936
ACA1_075170	CDS	ACA1_075170	NW_004457669.1	143693	145928	D	encoded by transcript ACA1_075170A; uncharacterized protein	join(143693..143850,143943..144062,144149..144227,144320..144418,144538..144631,144800..144881,144944..145041,145134..145693,145785..145928)	Acanthamoeba castellanii str. Neff	14924937
ACA1_075180	CDS	ACA1_075180	NW_004457669.1	146161	147559	R	encoded by transcript ACA1_075180A; dolichylphosphate mannosyltransferase polypeptide 1, catalytic subunit	complement(join(146161..146300,146369..146504,146782..146868,146993..147103,147214..147322,147432..147559))	Acanthamoeba castellanii str. Neff	14924938
ACA1_075190	CDS	ACA1_075190	NW_004457669.1	147680	149450	R	encoded by transcript ACA1_075190A; uncharacterized protein	complement(join(147680..147890,147990..148118,148236..148306,148438..148508,148610..148793,148892..149197,149263..149351,149411..149450))	Acanthamoeba castellanii str. Neff	14924939
ACA1_075210	CDS	ACA1_075210	NW_004457669.1	153036	153915	R	encoded by transcript ACA1_075210A; cyst specific protein CSP 21, putative	complement(join(153036..153090,153195..153328,153405..153494,153688..153915))	Acanthamoeba castellanii str. Neff	14924941
ACA1_075220	CDS	ACA1_075220	NW_004457669.1	154667	157793	R	encoded by transcript ACA1_075220A; uncharacterized protein	complement(join(154667..154780,154884..155272,155344..156762,156815..156869,156952..157030,157085..157118,157138..157247,157319..157402,157469..157624,157711..157793))	Acanthamoeba castellanii str. Neff	14924942
ACA1_075230	CDS	ACA1_075230	NW_004457669.1	157868	158776	R	encoded by transcript ACA1_075230A; glutathione Stransferase domain containing protein	complement(join(157868..158170,158269..158479,158553..158631,158701..158776))	Acanthamoeba castellanii str. Neff	14924943
ACA1_075240	CDS	ACA1_075240	NW_004457669.1	159215	159919	R	encoded by transcript ACA1_075240A; cyst specific protein CSP 21, putative	complement(join(159215..159355,159446..159535,159623..159919))	Acanthamoeba castellanii str. Neff	14924944
ACA1_075250	CDS	ACA1_075250	NW_004457669.1	160420	161873	R	encoded by transcript ACA1_075250A; fungal Zn(2)-Cys(6) binuclear cluster domain containing protein	complement(join(160420..161591,161726..161873))	Acanthamoeba castellanii str. Neff	14924945
ACA1_075260	CDS	ACA1_075260	NW_004457669.1	163144	163909	R	encoded by transcript ACA1_075260A; uncharacterized protein	complement(join(163144..163167,163255..163398,163458..163684,163768..163909))	Acanthamoeba castellanii str. Neff	14924946
ACA1_075270	CDS	ACA1_075270	NW_004457669.1	164140	166075	R	encoded by transcript ACA1_075270A; RNA recognition domain containing protein	complement(join(164140..164702,164776..164973,165062..165178,165269..165348,165455..165618,165699..165754,165844..165973,166061..166075))	Acanthamoeba castellanii str. Neff	14924947
ACA1_075280	CDS	ACA1_075280	NW_004457669.1	166437	166872	R	encoded by transcript ACA1_075280A; uncharacterized protein	complement(join(166437..166448,166474..166719,166807..166872))	Acanthamoeba castellanii str. Neff	14924948
ACA1_075290	CDS	ACA1_075290	NW_004457669.1	167021	169054	R	encoded by transcript ACA1_075290A; rRNA pseudouridine synthase, putative	complement(join(167021..167410,167482..167702,167788..167956,168039..168421,168503..168719,168863..169054))	Acanthamoeba castellanii str. Neff	14924949
ACA1_075300	CDS	ACA1_075300	NW_004457669.1	169382	173077	D	encoded by transcript ACA1_075300A; Sec1 family domain containing protein	join(169382..169590,169657..169727,169813..169948,170049..170111,170261..170389,170495..170528,170596..170695,170785..170882,170983..171130,171259..171383,171553..171645,171735..171885,171983..172113,172217..172440,172558..172722,172822..173077)	Acanthamoeba castellanii str. Neff	14924950
ACA1_075310	CDS	ACA1_075310	NW_004457669.1	173168	174996	R	encoded by transcript ACA1_075310A; uncharacterized protein	complement(join(173168..173264,173384..174996))	Acanthamoeba castellanii str. Neff	14924951
ACA1_075320	CDS	ACA1_075320	NW_004457669.1	175669	176225	D	encoded by transcript ACA1_075320A; uncharacterized protein	join(175669..175888,175999..176225)	Acanthamoeba castellanii str. Neff	14924952
ACA1_075330	CDS	ACA1_075330	NW_004457669.1	177284	177724	R	encoded by transcript ACA1_075330A; uncharacterized protein	complement(join(177284..177364,177387..177518,177617..177724))	Acanthamoeba castellanii str. Neff	14924953
ACA1_075340	CDS	ACA1_075340	NW_004457669.1	179211	183099	R	encoded by transcript ACA1_075340A; uncharacterized protein	complement(join(179211..179476,179808..179870,180014..180306,180389..180487,180505..180567,180648..180769,180864..180964,181050..181232,181305..181402,181490..182202,182339..182460,182539..182604,182668..182744,182814..182880,182946..183099))	Acanthamoeba castellanii str. Neff	14924954
ACA1_075350	CDS	ACA1_075350	NW_004457669.1	183183	184425	D	encoded by transcript ACA1_075350A; DNA binding nuclease	join(183183..183351,183470..183530,183641..183763,183863..183988,184075..184186,184285..184425)	Acanthamoeba castellanii str. Neff	14924955
ACA1_075360	CDS	ACA1_075360	NW_004457669.1	184620	186411	R	encoded by transcript ACA1_075360A; diaminopimelate epimerase	complement(join(184620..184714,184802..184968,185058..185206,185281..185504,185610..185756,185853..185881,186014..186411))	Acanthamoeba castellanii str. Neff	14924956
ACA1_075370	CDS	ACA1_075370	NW_004457669.1	186976	189664	D	encoded by transcript ACA1_075370A; amine oxidase, flavincontaining superfamily protein	join(186976..187089,187171..187312,187419..187557,187654..187764,187847..187906,187984..188090,188181..188286,188357..188462,188534..188582,188718..188848,188941..189036,189128..189242,189329..189406,189486..189664)	Acanthamoeba castellanii str. Neff	14924957
ACA1_075380	CDS	ACA1_075380	NW_004457669.1	189908	190401	D	encoded by transcript ACA1_075380A; uncharacterized protein	join(189908..189933,189990..190093,190157..190210,190289..190401)	Acanthamoeba castellanii str. Neff	14924958
ACA1_075390	CDS	ACA1_075390	NW_004457669.1	190573	191883	R	encoded by transcript ACA1_075390A; Yip1 domain containing protein	complement(join(190573..190706,190816..190952,191037..191153,191261..191303,191397..191490,191617..191883))	Acanthamoeba castellanii str. Neff	14924959
ACA1_075400	CDS	ACA1_075400	NW_004457669.1	192058	192537	D	encoded by transcript ACA1_075400A; K+ channel tetramerization subfamily protein	192058..>192537	Acanthamoeba castellanii str. Neff	14924960
ACA1_122990	CDS	ACA1_122990	NW_004457668.1	387	908	D	encoded by transcript ACA1_122990A; uncharacterized protein	join(387..432,511..602,681..908)	Acanthamoeba castellanii str. Neff	14924869
ACA1_123200	CDS	ACA1_123200	NW_004457668.1	2402	3112	D	encoded by transcript ACA1_123200A; uncharacterized protein	2402..3112	Acanthamoeba castellanii str. Neff	14924844
ACA1_123210	CDS	ACA1_123210	NW_004457668.1	3206	5241	R	encoded by transcript ACA1_123210A; uncharacterized protein	complement(join(3206..3670,3767..3967,4031..4127,4249..4820,5017..5066,5112..5241))	Acanthamoeba castellanii str. Neff	14924845
ACA1_123220	CDS	ACA1_123220	NW_004457668.1	5321	6918	R	encoded by transcript ACA1_123220A; uncharacterized protein	complement(join(5321..5779,5876..6076,6189..6285,6395..6918))	Acanthamoeba castellanii str. Neff	14924837
ACA1_123230	CDS	ACA1_123230	NW_004457668.1	7449	11546	R	encoded by transcript ACA1_123230A; Eukaryotic translation initiation factor 2alpha kinase	complement(join(7449..7634,7718..7819,7933..8070,8148..8405,8481..8591,8709..9576,9639..9727,9821..9881,9984..10048,10129..10680,11072..11169,11228..11546))	Acanthamoeba castellanii str. Neff	14924838
ACA1_123350	CDS	ACA1_123350	NW_004457668.1	16241	17028	R	encoded by transcript ACA1_123350A; uncharacterized protein	complement(join(16241..16397,16487..16563,16642..17028))	Acanthamoeba castellanii str. Neff	14924840
ACA1_123360	CDS	ACA1_123360	NW_004457668.1	17708	21042	D	encoded by transcript ACA1_123360A; fungal Zn(2)-Cys(6) binuclear cluster domain containing protein	join(17708..17730,18012..18125,18422..18603,18682..19648,19731..19842,19936..20058,20176..20295,20389..20474,20688..21042)	Acanthamoeba castellanii str. Neff	14924841
ACA1_123370	CDS	ACA1_123370	NW_004457668.1	21843	24278	D	encoded by transcript ACA1_123370A; uncharacterized protein	join(21843..21853,22088..22335,22421..22481,22568..22649,22665..23374,23478..23586,23680..23765,23915..24029,24117..24278)	Acanthamoeba castellanii str. Neff	14924842
ACA1_123380	CDS	ACA1_123380	NW_004457668.1	24818	27304	D	encoded by transcript ACA1_123380A; uncharacterized protein	join(24818..24975,25212..26304,26365..26483,26586..26798,26898..26994,27089..27304)	Acanthamoeba castellanii str. Neff	14924843
ACA1_123390	CDS	ACA1_123390	NW_004457668.1	27369	29506	R	encoded by transcript ACA1_123390A; uncharacterized protein	complement(join(27369..27670,27745..27890,28023..28135,28251..28365,28475..28560,28643..28739,28831..29031,29076..29506))	Acanthamoeba castellanii str. Neff	14924846
ACA1_123500	CDS	ACA1_123500	NW_004457668.1	31617	33049	D	encoded by transcript ACA1_123500A; uncharacterized protein	join(<31617..31728,31892..32796,32894..33049)	Acanthamoeba castellanii str. Neff	14924847
ACA1_123510	CDS	ACA1_123510	NW_004457668.1	33505	43240	R	encoded by transcript ACA1_123510A; serine/threonineprotein kinase/receptor	complement(join(33505..33906,33967..34114,34303..34379,37011..37111,37232..37624,37694..38652,38725..38924,39013..39171,39254..39370,39446..39520,39615..39796,39879..40129,40196..40343,40430..40565,40645..40791,40867..41108,41188..41540,41656..41969,42040..42300,42399..42419,42510..42647,42734..42782,42990..43092,43162..43240))	Acanthamoeba castellanii str. Neff	14924848
ACA1_123620	CDS	ACA1_123620	NW_004457668.1	43723	45532	R	encoded by transcript ACA1_123620A; UAA transporter family protein	complement(join(43723..43926,44017..44081,44165..44215,44302..44794,44864..45532))	Acanthamoeba castellanii str. Neff	14924849
ACA1_123630	CDS	ACA1_123630	NW_004457668.1	45794	47304	R	encoded by transcript ACA1_123630A; uncharacterized protein	complement(join(45794..45910,45995..46088,46175..46279,46385..46489,46582..46619,46712..46779,46851..47304))	Acanthamoeba castellanii str. Neff	14924850
ACA1_123640	CDS	ACA1_123640	NW_004457668.1	47803	50479	D	encoded by transcript ACA1_123640A; uncharacterized protein	join(47803..48336,48475..49288,49312..49453,49540..50479)	Acanthamoeba castellanii str. Neff	14924851
ACA1_123750	CDS	ACA1_123750	NW_004457668.1	52804	53238	D	encoded by transcript ACA1_123750A; uncharacterized protein	52804..53238	Acanthamoeba castellanii str. Neff	14924852
ACA1_123760	CDS	ACA1_123760	NW_004457668.1	53597	56757	D	encoded by transcript ACA1_123760A; serine/threonine kinase	join(53597..53750,53845..53966,54051..55080,55279..55381,55450..55557,55646..55679,55750..55840,55912..56024,56117..56212,56307..56397,56462..56757)	Acanthamoeba castellanii str. Neff	14924853
ACA1_123770	CDS	ACA1_123770	NW_004457668.1	57054	57582	D	encoded by transcript ACA1_123770A; uncharacterized protein	join(57054..57263,57415..57582)	Acanthamoeba castellanii str. Neff	14924854
ACA1_123780	CDS	ACA1_123780	NW_004457668.1	57975	61941	D	encoded by transcript ACA1_123780A; AT hook motif domain containing protein	join(57975..60005,60066..60139,60262..60350,60419..61941)	Acanthamoeba castellanii str. Neff	14924855
ACA1_123790	CDS	ACA1_123790	NW_004457668.1	62832	63686	D	encoded by transcript ACA1_123790A; uncharacterized protein	join(<62832..62912,62970..63097,63202..63310,63407..63483,63554..63686)	Acanthamoeba castellanii str. Neff	14924856
ACA1_123800	CDS	ACA1_123800	NW_004457668.1	64320	65632	R	encoded by transcript ACA1_123800A; uncharacterized protein	complement(join(64320..64367,64500..64614,64712..64797,64868..65015,65124..65388,65506..65632))	Acanthamoeba castellanii str. Neff	14924857
ACA1_123810	CDS	ACA1_123810	NW_004457668.1	65791	66185	R	encoded by transcript ACA1_123810A; uncharacterized protein	complement(join(65791..66056,66128..66185))	Acanthamoeba castellanii str. Neff	14924858
ACA1_123820	CDS	ACA1_123820	NW_004457668.1	66586	67596	R	encoded by transcript ACA1_123820A; uncharacterized protein	complement(join(66586..66721,66831..66916,66993..67107,67256..67445,67515..67596))	Acanthamoeba castellanii str. Neff	14924859
ACA1_123830	CDS	ACA1_123830	NW_004457668.1	68328	70609	R	encoded by transcript ACA1_123830A; uncharacterized protein	complement(join(68328..68492,68677..68791,68886..68970,69093..69217,69292..69613,69690..70247,70352..70450,70573..70609))	Acanthamoeba castellanii str. Neff	14924860
ACA1_123840	CDS	ACA1_123840	NW_004457668.1	70728	71528	R	encoded by transcript ACA1_123840A; ybaK/ebsC protein	complement(join(70728..71017,71103..71178,71291..71343,71417..71528))	Acanthamoeba castellanii str. Neff	14924861
ACA1_123850	CDS	ACA1_123850	NW_004457668.1	71880	72546	D	encoded by transcript ACA1_123850A; LIM domain containing protein	join(71880..72065,72169..72546)	Acanthamoeba castellanii str. Neff	14924862
ACA1_123860	CDS	ACA1_123860	NW_004457668.1	72960	75167	D	encoded by transcript ACA1_123860A; uncharacterized protein	join(72960..73114,73263..73555,73716..73828,73906..74324,74441..74537,74615..74752,74826..74912,74988..75167)	Acanthamoeba castellanii str. Neff	14924863
ACA1_123880	CDS	ACA1_123880	NW_004457668.1	76868	78548	R	encoded by transcript ACA1_123880A; uncharacterized protein	complement(join(76868..76996,77149..77196,77297..77497,77611..77713,77876..78024,78178..78302,78434..78548))	Acanthamoeba castellanii str. Neff	14924865
ACA1_123890	CDS	ACA1_123890	NW_004457668.1	79083	81144	R	encoded by transcript ACA1_123890A; uncharacterized protein	complement(join(79083..79466,79544..79747,79855..79966,80054..80636,80716..80966,81077..81144))	Acanthamoeba castellanii str. Neff	14924866
ACA1_123900	CDS	ACA1_123900	NW_004457668.1	81274	81912	R	encoded by transcript ACA1_123900A; GCN5related N-acetyltransferase	complement(join(81274..81695,81747..81912))	Acanthamoeba castellanii str. Neff	14924867
ACA1_123910	CDS	ACA1_123910	NW_004457668.1	82061	82345	R	encoded by transcript ACA1_123910A; uncharacterized protein	complement(82061..>82345)	Acanthamoeba castellanii str. Neff	14924868
ACA1_300720	CDS	ACA1_300720	NW_004457667.1	256	1490	D	encoded by transcript ACA1_300720A; WD repeat domain 43 isoform 5, putative	join(256..438,599..650,763..970,1063..1219,1332..1490)	Acanthamoeba castellanii str. Neff	14924836
ACA1_300830	CDS	ACA1_300830	NW_004457667.1	3486	5132	D	encoded by transcript ACA1_300830A; permeases of the major facilitator superfamily	3486..5132	Acanthamoeba castellanii str. Neff	14924834
ACA1_300840	CDS	ACA1_300840	NW_004457667.1	6079	7158	D	encoded by transcript ACA1_300840A; dual specificity phosphatase, catalytic domain containing protein	join(6079..6664,6764..6891,6973..7158)	Acanthamoeba castellanii str. Neff	14924835
ACA1_300850	CDS	ACA1_300850	NW_004457667.1	7317	9142	D	encoded by transcript ACA1_300850A; CSA protein	join(7317..7438,7518..7631,7715..7823,7930..8080,8178..8354,8452..8609,8693..8884,8954..9142)	Acanthamoeba castellanii str. Neff	14924828
ACA1_300860	CDS	ACA1_300860	NW_004457667.1	9350	10670	D	encoded by transcript ACA1_300860A; transcription factor tfiib repeat domain containing protein	join(9350..9476,9600..9958,10041..10670)	Acanthamoeba castellanii str. Neff	14924829
ACA1_300870	CDS	ACA1_300870	NW_004457667.1	10748	11326	R	encoded by transcript ACA1_300870A; uncharacterized protein	complement(join(10748..10897,11009..11326))	Acanthamoeba castellanii str. Neff	14924830
ACA1_300880	CDS	ACA1_300880	NW_004457667.1	11599	16253	R	encoded by transcript ACA1_300880A; valine-tRNA ligase	complement(join(11599..11823,12035..12334,12579..13316,13552..13800,13925..14086,14321..14634,14857..15271,15343..15589,15677..15887,15959..16028,16110..16253))	Acanthamoeba castellanii str. Neff	14924831
ACA1_300890	CDS	ACA1_300890	NW_004457667.1	16508	19134	R	encoded by transcript ACA1_300890A; uncharacterized protein	complement(join(16508..16721,16821..16910,17003..17144,17222..17284,17354..17584,17680..17803,17928..18040,18126..18164,18241..18317,18418..18473,18607..18725,18993..19134))	Acanthamoeba castellanii str. Neff	14924832
ACA1_300900	CDS	ACA1_300900	NW_004457667.1	19293	20114	R	encoded by transcript ACA1_300900A; uncharacterized protein	complement(join(19293..19367,19451..19694,19775..19857,19971..>20114))	Acanthamoeba castellanii str. Neff	14924833
ACA1_334900	CDS	ACA1_334900	NW_004457666.1	3011	8363	R	encoded by transcript ACA1_334900A; uncharacterized protein	complement(join(3011..3154,7191..7343,7442..7509,7622..8363))	Acanthamoeba castellanii str. Neff	14924818
ACA1_335110	CDS	ACA1_335110	NW_004457666.1	9677	10674	R	encoded by transcript ACA1_335110A; Multiple EGFlike-domains 10, putative	complement(join(9677..9713,9965..10039,10154..10674))	Acanthamoeba castellanii str. Neff	14924819
ACA1_335220	CDS	ACA1_335220	NW_004457666.1	15038	16049	D	encoded by transcript ACA1_335220A; uncharacterized protein	join(15038..15063,15108..15239,15335..15369,15519..15689,15788..15865,15952..16049)	Acanthamoeba castellanii str. Neff	14924825
ACA1_335230	CDS	ACA1_335230	NW_004457666.1	16271	22677	D	encoded by transcript ACA1_335230A; uncharacterized protein	join(16271..16292,16409..16582,16871..17775,17791..19582,21830..22677)	Acanthamoeba castellanii str. Neff	14924826
ACA1_335440	CDS	ACA1_335440	NW_004457666.1	24601	25415	D	encoded by transcript ACA1_335440A; uncharacterized protein	join(<24601..24810,24849..>25415)	Acanthamoeba castellanii str. Neff	14924820
ACA1_335550	CDS	ACA1_335550	NW_004457666.1	27458	28618	D	encoded by transcript ACA1_335550A; uncharacterized protein	join(27458..27910,28007..28618)	Acanthamoeba castellanii str. Neff	14924821
ACA1_335560	CDS	ACA1_335560	NW_004457666.1	29273	29848	D	encoded by transcript ACA1_335560A; integrase core domain containing protein	join(29273..29641,29678..29848)	Acanthamoeba castellanii str. Neff	14924822
ACA1_335670	CDS	ACA1_335670	NW_004457666.1	30277	31126	R	encoded by transcript ACA1_335670A; major capsid protein	complement(join(<30277..30564,30629..31126))	Acanthamoeba castellanii str. Neff	14924823
ACA1_335680	CDS	ACA1_335680	NW_004457666.1	31400	32041	D	encoded by transcript ACA1_335680A; uncharacterized protein	join(31400..31698,31717..>32041)	Acanthamoeba castellanii str. Neff	14924824
ACA1_304720	CDS	ACA1_304720	NW_004457665.1	9460	10152	D	encoded by transcript ACA1_304720A; uncharacterized protein	join(9460..9812,10113..10152)	Acanthamoeba castellanii str. Neff	14924816
ACA1_304830	CDS	ACA1_304830	NW_004457665.1	13753	14519	R	encoded by transcript ACA1_304830A; uncharacterized protein	complement(join(13753..13941,13956..14519))	Acanthamoeba castellanii str. Neff	14924817
ACA1_304840	CDS	ACA1_304840	NW_004457665.1	14846	15275	R	encoded by transcript ACA1_304840A; uncharacterized protein	complement(join(14846..15039,15188..15275))	Acanthamoeba castellanii str. Neff	14924814
ACA1_305050	CDS	ACA1_305050	NW_004457665.1	30044	30645	D	encoded by transcript ACA1_305050A; uncharacterized protein	join(30044..30165,30243..30645)	Acanthamoeba castellanii str. Neff	14924815
ACA1_082960	CDS	ACA1_082960	NW_004457664.1	89	862	R	encoded by transcript ACA1_082960A; ubiquitin specific protease 22 family protein	complement(<89..862)	Acanthamoeba castellanii str. Neff	14924812
ACA1_083070	CDS	ACA1_083070	NW_004457664.1	5437	7697	D	encoded by transcript ACA1_083070A; RhoGAP domain containing protein	join(5437..5457,5598..5817,5938..6072,6171..6289,6399..6803,6834..7068,7159..7697)	Acanthamoeba castellanii str. Neff	14924813
ACA1_083080	CDS	ACA1_083080	NW_004457664.1	7894	10017	R	encoded by transcript ACA1_083080A; Hemolysin-III related subfamily protein	complement(join(7894..8031,8214..8270,8382..8430,8536..8606,8697..8771,8998..9077,9203..9330,9427..9521,9628..9698,9861..10017))	Acanthamoeba castellanii str. Neff	14924809
ACA1_083090	CDS	ACA1_083090	NW_004457664.1	10551	10958	R	encoded by transcript ACA1_083090A; uncharacterized protein	complement(join(10551..10757,10827..10958))	Acanthamoeba castellanii str. Neff	14924810
ACA1_083100	CDS	ACA1_083100	NW_004457664.1	13230	16184	R	encoded by transcript ACA1_083100A; endonuclease/exonuclease/phosphatase family protein	complement(join(13230..13699,13832..13937,14018..14244,14365..14530,14645..15157,15234..15403,15478..15550,15630..15759,15922..15971,16029..>16184))	Acanthamoeba castellanii str. Neff	14924811
ACA1_297750	CDS	ACA1_297750	NW_004457663.1	475	1903	R	encoded by transcript ACA1_297750A; uncharacterized protein	complement(join(<475..780,881..1097,1231..1384,1501..1671,1831..1903))	Acanthamoeba castellanii str. Neff	14924808
ACA1_297760	CDS	ACA1_297760	NW_004457663.1	2767	3990	D	encoded by transcript ACA1_297760A; uncharacterized protein	join(2767..2935,3068..3226,3402..3503,3662..3740,3816..3990)	Acanthamoeba castellanii str. Neff	14924805
ACA1_297770	CDS	ACA1_297770	NW_004457663.1	4263	5604	D	encoded by transcript ACA1_297770A; uncharacterized protein	join(4263..4732,4877..5091,5178..5324,5393..5604)	Acanthamoeba castellanii str. Neff	14924804
ACA1_297780	CDS	ACA1_297780	NW_004457663.1	6258	7133	D	encoded by transcript ACA1_297780A; Peroxin 11b (Pex11b), putative	6258..7133	Acanthamoeba castellanii str. Neff	14924806
ACA1_297790	CDS	ACA1_297790	NW_004457663.1	7545	10358	R	encoded by transcript ACA1_297790A; helicase associated domain containing protein	complement(join(7545..7550,7638..7847,7978..8107,8256..9523,9594..10358))	Acanthamoeba castellanii str. Neff	14924807
ACA1_314330	CDS	ACA1_314330	NW_004457662.1	122	1273	R	encoded by transcript ACA1_314330A; uncharacterized protein	complement(join(122..160,183..262,367..>1273))	Acanthamoeba castellanii str. Neff	14924803
ACA1_314440	CDS	ACA1_314440	NW_004457662.1	7888	14446	R	encoded by transcript ACA1_314440A; serine/threonine protein kinase, putative	complement(join(7888..8122,8211..8254,9063..10185,10288..10769,10878..10994,11076..13552,13915..14446))	Acanthamoeba castellanii str. Neff	14924801
ACA1_314550	CDS	ACA1_314550	NW_004457662.1	14894	15415	D	encoded by transcript ACA1_314550A; uncharacterized protein	14894..>15415	Acanthamoeba castellanii str. Neff	14924802
ACA1_023050	CDS	ACA1_023050	NW_004457661.1	2649	3686	D	encoded by transcript ACA1_023050A; uncharacterized protein	join(2649..2935,2955..3025,3097..3152,3236..3286,3408..3500,3537..3686)	Acanthamoeba castellanii str. Neff	14924800
ACA1_023060	CDS	ACA1_023060	NW_004457661.1	4564	5799	R	encoded by transcript ACA1_023060A; GTPase, putative	complement(join(4564..5088,5110..5799))	Acanthamoeba castellanii str. Neff	14924787
ACA1_023070	CDS	ACA1_023070	NW_004457661.1	6512	7465	D	encoded by transcript ACA1_023070A; uncharacterized protein	6512..7465	Acanthamoeba castellanii str. Neff	14924788
ACA1_023080	CDS	ACA1_023080	NW_004457661.1	8556	8815	D	encoded by transcript ACA1_023080A; uncharacterized protein	join(8556..8639,8675..8815)	Acanthamoeba castellanii str. Neff	14924789
ACA1_023090	CDS	ACA1_023090	NW_004457661.1	11649	12210	D	encoded by transcript ACA1_023090A; uncharacterized protein	join(11649..11837,11905..12210)	Acanthamoeba castellanii str. Neff	14924790
ACA1_023100	CDS	ACA1_023100	NW_004457661.1	16554	17385	D	encoded by transcript ACA1_023100A; uncharacterized protein	join(16554..16791,16952..17385)	Acanthamoeba castellanii str. Neff	14924791
ACA1_023110	CDS	ACA1_023110	NW_004457661.1	20201	23459	D	encoded by transcript ACA1_023110A; uncharacterized protein	join(20201..20549,20693..21232,21293..21645,21752..21929,21988..23459)	Acanthamoeba castellanii str. Neff	14924792
ACA1_023120	CDS	ACA1_023120	NW_004457661.1	25888	27607	R	encoded by transcript ACA1_023120A; uncharacterized protein	complement(join(25888..26108,26178..26440,26533..26611,26708..26836,26930..27022,27093..27203,27275..27361,27424..27504,27580..27607))	Acanthamoeba castellanii str. Neff	14924793
ACA1_023130	CDS	ACA1_023130	NW_004457661.1	27870	29301	R	encoded by transcript ACA1_023130A; uncharacterized protein	complement(join(27870..27961,28024..28098,28159..28239,28310..28393,28454..28594,28710..28772,28835..28944,29027..29165,29226..29301))	Acanthamoeba castellanii str. Neff	14924794
ACA1_023140	CDS	ACA1_023140	NW_004457661.1	30536	31270	D	encoded by transcript ACA1_023140A; uncharacterized protein	join(30536..30781,30892..31020,31226..31270)	Acanthamoeba castellanii str. Neff	14924795
ACA1_023150	CDS	ACA1_023150	NW_004457661.1	34385	35018	R	encoded by transcript ACA1_023150A; uncharacterized protein	complement(join(34385..34910,34933..35018))	Acanthamoeba castellanii str. Neff	14924796
ACA1_023160	CDS	ACA1_023160	NW_004457661.1	35508	35879	R	encoded by transcript ACA1_023160A; uncharacterized protein	complement(join(35508..35779,35828..35879))	Acanthamoeba castellanii str. Neff	14924797
ACA1_023170	CDS	ACA1_023170	NW_004457661.1	38215	39657	D	encoded by transcript ACA1_023170A; uncharacterized protein	join(38215..38511,38598..38847,38922..39349,39460..39657)	Acanthamoeba castellanii str. Neff	14924798
ACA1_023180	CDS	ACA1_023180	NW_004457661.1	41176	41885	D	encoded by transcript ACA1_023180A; uncharacterized protein	join(41176..41319,41521..41646,41661..41885)	Acanthamoeba castellanii str. Neff	14924799
ACA1_345010	CDS	ACA1_345010	NW_004457660.1	21	1217	R	encoded by transcript ACA1_345010A; non-specific protein-tyrosine kinase	complement(<21..1217)	Acanthamoeba castellanii str. Neff	14924786
ACA1_345120	CDS	ACA1_345120	NW_004457660.1	8309	9832	R	encoded by transcript ACA1_345120A; ankyrin 2,3/unc44, putative	complement(join(8309..8760,8839..8945,9022..9141,9215..9326,9412..9474,9604..9681,9769..>9832))	Acanthamoeba castellanii str. Neff	14924785
ACA1_345230	CDS	ACA1_345230	NW_004457660.1	12733	15141	R	encoded by transcript ACA1_345230A; uncharacterized protein	complement(join(12733..13425,13541..13596,13671..13990,14077..14177,14292..14433,14529..14656,14836..14898,15043..15141))	Acanthamoeba castellanii str. Neff	14924781
ACA1_345340	CDS	ACA1_345340	NW_004457660.1	18955	19899	R	encoded by transcript ACA1_345340A; Rap/ran GTPase-activating protein	complement(join(<18955..19035,19142..19268,19418..19539,19666..19761,19852..19899))	Acanthamoeba castellanii str. Neff	14924782
ACA1_345450	CDS	ACA1_345450	NW_004457660.1	24576	25298	D	encoded by transcript ACA1_345450A; group A glucokinaselike, putative	join(<24576..24699,24799..24895,24967..25042,25131..25298)	Acanthamoeba castellanii str. Neff	14924783
ACA1_345460	CDS	ACA1_345460	NW_004457660.1	27137	27513	D	encoded by transcript ACA1_345460A; uncharacterized protein	27137..>27513	Acanthamoeba castellanii str. Neff	14924784
ACA1_025830	CDS	ACA1_025830	NW_004457659.1	568	1044	R	encoded by transcript ACA1_025830A; uncharacterized protein	complement(join(568..577,610..848,933..997,1017..1044))	Acanthamoeba castellanii str. Neff	14924780
ACA1_025840	CDS	ACA1_025840	NW_004457659.1	3179	4867	D	encoded by transcript ACA1_025840A; uncharacterized protein	join(3179..3245,3265..3429,3536..3702,3732..3782,3804..3964,4045..4371,4459..4867)	Acanthamoeba castellanii str. Neff	14924775
ACA1_025850	CDS	ACA1_025850	NW_004457659.1	7534	7929	R	encoded by transcript ACA1_025850A; uncharacterized protein	complement(join(7534..7744,7766..7929))	Acanthamoeba castellanii str. Neff	14924776
ACA1_025860	CDS	ACA1_025860	NW_004457659.1	8150	8434	D	encoded by transcript ACA1_025860A; Homeobox domain containing protein	8150..8434	Acanthamoeba castellanii str. Neff	14924777
ACA1_025870	CDS	ACA1_025870	NW_004457659.1	8537	9337	R	encoded by transcript ACA1_025870A; uncharacterized protein	complement(join(8537..8602,8634..9287,9299..9337))	Acanthamoeba castellanii str. Neff	14924778
ACA1_025880	CDS	ACA1_025880	NW_004457659.1	12137	13521	R	encoded by transcript ACA1_025880A; uncharacterized protein	complement(join(12137..12430,12445..13521))	Acanthamoeba castellanii str. Neff	14924779
ACA1_001250	CDS	ACA1_001250	NW_004457658.1	4004	11317	D	encoded by transcript ACA1_001250A; uncharacterized protein	join(4004..4022,4056..4160,4229..4393,4550..4584,4654..4784,4850..4923,4986..5051,5151..5386,5449..5662,5718..5826,5893..5974,6051..6254,6318..6418,6502..6680,6752..8513,8577..8880,8955..9134,9198..9329,9410..10177,10303..10455,10559..11317)	Acanthamoeba castellanii str. Neff	14924768
ACA1_001260	CDS	ACA1_001260	NW_004457658.1	13444	16452	D	encoded by transcript ACA1_001260A; TBC domaincontaining protein	join(13444..14548,14663..14757,14870..14918,15050..15114,15233..15330,15425..15519,15590..15617,15728..15890,15992..16171,16273..16452)	Acanthamoeba castellanii str. Neff	14924769
ACA1_001280	CDS	ACA1_001280	NW_004457658.1	17392	18733	R	encoded by transcript ACA1_001280A; uncharacterized protein	complement(join(17392..17419,17454..17540,17670..17789,17931..18060,18225..18593,18691..18733))	Acanthamoeba castellanii str. Neff	14924773
ACA1_001300	CDS	ACA1_001300	NW_004457658.1	20701	23681	R	encoded by transcript ACA1_001300A; fucose1-phosphate guanylyltransferase	complement(join(20701..20926,21000..21296,21363..21485,21588..21654,21765..21945,22128..22244,22343..22587,22741..22866,22955..23050,23163..23269,23390..23498,23576..23681))	Acanthamoeba castellanii str. Neff	14924770
ACA1_001310	CDS	ACA1_001310	NW_004457658.1	23914	28347	D	encoded by transcript ACA1_001310A; uncharacterized protein	join(23914..24087,27979..28123,28247..>28347)	Acanthamoeba castellanii str. Neff	14924771
ACA1_195390	CDS	ACA1_195390	NW_004457657.1	17	2152	R	encoded by transcript ACA1_195390A; golgi family protein, putative	complement(join(<17..76,191..282,415..515,658..851,953..1010,1120..1204,1296..1566,1630..1656,1715..2001,2116..2152))	Acanthamoeba castellanii str. Neff	14924766
ACA1_195400	CDS	ACA1_195400	NW_004457657.1	2439	5977	D	encoded by transcript ACA1_195400A; uncharacterized protein	join(2439..2519,2704..2862,3044..3314,3485..3602,3723..3877,4015..4230,4330..4417,4491..4549,4656..4732,4799..4925,5097..5239,5389..5578,5682..5977)	Acanthamoeba castellanii str. Neff	14924726
ACA1_195410	CDS	ACA1_195410	NW_004457657.1	6425	6892	D	encoded by transcript ACA1_195410A; uncharacterized protein	6425..6892	Acanthamoeba castellanii str. Neff	14924727
ACA1_195420	CDS	ACA1_195420	NW_004457657.1	7310	9792	D	encoded by transcript ACA1_195420A; ATPase/histidine kinase/DNA gyrase B/HSP90 domain containing protein	join(7310..7677,7787..7907,8120..8186,8247..8464,8543..8650,8721..8876,8974..9413,9426..9514,9584..9792)	Acanthamoeba castellanii str. Neff	14924728
ACA1_195530	CDS	ACA1_195530	NW_004457657.1	10570	11502	D	encoded by transcript ACA1_195530A; Zn-finger in Ran binding protein and others domain containing protein	join(10570..10580,10629..11502)	Acanthamoeba castellanii str. Neff	14924729
ACA1_195540	CDS	ACA1_195540	NW_004457657.1	11553	13764	R	encoded by transcript ACA1_195540A; zinc finger, C3HC4 type (RING finger) domain containing protein	complement(join(11553..11696,11794..11924,12075..12225,12373..12507,12576..12730,12799..12865,12940..13067,13232..13427,13557..13634,13720..13764))	Acanthamoeba castellanii str. Neff	14924730
ACA1_195550	CDS	ACA1_195550	NW_004457657.1	14144	15046	R	encoded by transcript ACA1_195550A; uncharacterized protein	complement(join(14144..14715,14740..15046))	Acanthamoeba castellanii str. Neff	14924731
ACA1_195560	CDS	ACA1_195560	NW_004457657.1	15256	17075	D	encoded by transcript ACA1_195560A; RIO1 family/Rio2, Nterminal domain containing protein	join(15256..15747,15813..15901,15996..16187,16283..17075)	Acanthamoeba castellanii str. Neff	14924732
ACA1_195570	CDS	ACA1_195570	NW_004457657.1	17302	18505	D	encoded by transcript ACA1_195570A; uncharacterized protein	join(17302..17355,17464..17604,17719..17925,18007..18061,18145..18293,18410..18505)	Acanthamoeba castellanii str. Neff	14924733
ACA1_195580	CDS	ACA1_195580	NW_004457657.1	19057	19882	D	encoded by transcript ACA1_195580A; uncharacterized protein	join(19057..19079,19140..19204,19329..19491,19560..19698,19778..19882)	Acanthamoeba castellanii str. Neff	14924734
ACA1_195590	CDS	ACA1_195590	NW_004457657.1	20466	22357	R	encoded by transcript ACA1_195590A; uncharacterized protein	complement(join(20466..21262,21402..21995,22114..22357))	Acanthamoeba castellanii str. Neff	14924735
ACA1_195700	CDS	ACA1_195700	NW_004457657.1	22706	23464	R	encoded by transcript ACA1_195700A; uncharacterized protein	complement(22706..23464)	Acanthamoeba castellanii str. Neff	14924736
ACA1_195710	CDS	ACA1_195710	NW_004457657.1	24563	25395	R	encoded by transcript ACA1_195710A; uncharacterized protein	complement(join(24563..24704,24849..24993,25032..25395))	Acanthamoeba castellanii str. Neff	14924737
ACA1_195720	CDS	ACA1_195720	NW_004457657.1	25678	26343	R	encoded by transcript ACA1_195720A; uncharacterized protein	complement(join(25678..25985,26127..26343))	Acanthamoeba castellanii str. Neff	14924738
ACA1_195730	CDS	ACA1_195730	NW_004457657.1	26966	27876	R	encoded by transcript ACA1_195730A; uncharacterized protein	complement(join(26966..27716,27821..27876))	Acanthamoeba castellanii str. Neff	14924739
ACA1_195840	CDS	ACA1_195840	NW_004457657.1	30713	34171	D	encoded by transcript ACA1_195840A; EGFlike domain containing protein	join(<30713..30933,31088..31194,31289..31380,31500..31520,31646..31735,31807..31926,32030..32155,32260..32366,32441..32544,32622..32852,32949..33089,33179..33298,33390..33617,33722..33895,34026..34171)	Acanthamoeba castellanii str. Neff	14924740
ACA1_195850	CDS	ACA1_195850	NW_004457657.1	34318	36354	D	encoded by transcript ACA1_195850A; uncharacterized protein	join(34318..34578,34722..34757,34850..34907,34984..35075,35149..35238,35325..35524,35610..35721,35794..35924,36039..36354)	Acanthamoeba castellanii str. Neff	14924741
ACA1_195960	CDS	ACA1_195960	NW_004457657.1	41028	42509	R	encoded by transcript ACA1_195960A; RFX DNA-binding domain containing protein	complement(join(41028..41378,41396..41429,41890..42282,42394..42509))	Acanthamoeba castellanii str. Neff	14924742
ACA1_196070	CDS	ACA1_196070	NW_004457657.1	43176	44036	R	encoded by transcript ACA1_196070A; regulator of chromosome condensation (RCC1) repeat domain containing protein	complement(join(43176..43319,43351..43581,43692..43913,43974..44036))	Acanthamoeba castellanii str. Neff	14924743
ACA1_196080	CDS	ACA1_196080	NW_004457657.1	44328	47807	D	encoded by transcript ACA1_196080A; protein kinase domain containing protein	join(44328..44358,44495..44628,44739..44822,44872..44988,45125..45286,45367..45541,45672..45799,45910..45977,46119..46225,46316..46389,46502..46636,46747..46986,47074..47193,47262..47501,47655..47807)	Acanthamoeba castellanii str. Neff	14924744
ACA1_196090	CDS	ACA1_196090	NW_004457657.1	48002	51328	D	encoded by transcript ACA1_196090A; uncharacterized protein	join(48002..48095,48157..48234,48381..48497,48619..48773,48901..48957,49076..49193,49337..49539,49653..49772,49855..49982,50081..50289,50358..50524,50710..50802,50887..50988,51224..51328)	Acanthamoeba castellanii str. Neff	14924745
ACA1_196200	CDS	ACA1_196200	NW_004457657.1	52844	53683	D	encoded by transcript ACA1_196200A; endonuclease V protein, putative	join(52844..52947,53048..53141,53208..53301,53403..53545,53630..>53683)	Acanthamoeba castellanii str. Neff	14924746
ACA1_196310	CDS	ACA1_196310	NW_004457657.1	55436	57681	D	encoded by transcript ACA1_196310A; [Ribulose-bisphosphate-carboxylase]-lysine N-methyltransferase	join(55436..55582,55664..55950,56026..56164,56216..56308,56396..56459,56531..56646,56761..56942,57153..57681)	Acanthamoeba castellanii str. Neff	14924747
ACA1_196320	CDS	ACA1_196320	NW_004457657.1	57869	61640	D	encoded by transcript ACA1_196320A; FHA domain containing protein	join(57869..58059,58170..58442,58544..59876,60083..60195,60286..60403,60485..60608,60703..60801,60883..61022,61103..61189,61325..61453,61545..61640)	Acanthamoeba castellanii str. Neff	14924748
ACA1_196530	CDS	ACA1_196530	NW_004457657.1	62412	62609	D	encoded by transcript ACA1_196530A; uncharacterized protein	62412..62609	Acanthamoeba castellanii str. Neff	14924749
ACA1_196550	CDS	ACA1_196550	NW_004457657.1	64730	68097	R	encoded by transcript ACA1_196550A; RhoGEF domain containing protein	complement(join(64730..64941,65049..65261,65363..65435,65528..65695,65824..65917,65930..66027,66134..66246,66360..66429,66526..66605,66694..67007,67123..67226,67311..67476,67592..68097))	Acanthamoeba castellanii str. Neff	14924751
ACA1_196660	CDS	ACA1_196660	NW_004457657.1	68289	68438	D	encoded by transcript ACA1_196660A; uncharacterized protein	<68289..68438	Acanthamoeba castellanii str. Neff	14924752
ACA1_196680	CDS	ACA1_196680	NW_004457657.1	69727	70874	D	encoded by transcript ACA1_196680A; oxidoreductase	join(69727..69758,69779..70337,70359..70874)	Acanthamoeba castellanii str. Neff	14924754
ACA1_196690	CDS	ACA1_196690	NW_004457657.1	70981	72397	D	encoded by transcript ACA1_196690A; deoxyribosephosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase	join(70981..71044,71114..71169,71244..71363,71444..71551,71641..71786,71844..71926,72015..72068,72165..72397)	Acanthamoeba castellanii str. Neff	14924755
ACA1_196710	CDS	ACA1_196710	NW_004457657.1	77412	78852	D	encoded by transcript ACA1_196710A; oxidoreductase molybdopterin binding domain containing protein	join(77412..77782,77863..78067,78129..78411,78494..78852)	Acanthamoeba castellanii str. Neff	14924757
ACA1_196720	CDS	ACA1_196720	NW_004457657.1	79049	79850	R	encoded by transcript ACA1_196720A; Hypothetical protein	complement(join(79049..79309,79400..79602,79682..79850))	Acanthamoeba castellanii str. Neff	14924758
ACA1_196730	CDS	ACA1_196730	NW_004457657.1	80023	83665	D	encoded by transcript ACA1_196730A; PWWP domain containing protein	join(80023..81066,81187..81281,81386..82214,82295..82450,82556..83665)	Acanthamoeba castellanii str. Neff	14924759
ACA1_196840	CDS	ACA1_196840	NW_004457657.1	84238	84702	R	encoded by transcript ACA1_196840A; uncharacterized protein	complement(join(84238..84535,84671..84702))	Acanthamoeba castellanii str. Neff	14924760
ACA1_196850	CDS	ACA1_196850	NW_004457657.1	84917	85920	R	encoded by transcript ACA1_196850A; uncharacterized protein	complement(join(84917..85258,85351..85499,85577..85658,85801..85920))	Acanthamoeba castellanii str. Neff	14924761
ACA1_196960	CDS	ACA1_196960	NW_004457657.1	86116	86622	D	encoded by transcript ACA1_196960A; nitrate reductase (NADH), putative	join(86116..86197,86264..86622)	Acanthamoeba castellanii str. Neff	14924762
ACA1_196970	CDS	ACA1_196970	NW_004457657.1	86931	87980	D	encoded by transcript ACA1_196970A; uncharacterized protein	join(86931..87149,87273..87402,87480..87656,87732..87858,87917..87980)	Acanthamoeba castellanii str. Neff	14924763
ACA1_197080	CDS	ACA1_197080	NW_004457657.1	88782	89486	D	encoded by transcript ACA1_197080A; uncharacterized protein	88782..>89486	Acanthamoeba castellanii str. Neff	14924764
ACA1_197190	CDS	ACA1_197190	NW_004457657.1	90736	91235	R	encoded by transcript ACA1_197190A; Alpha-galactosidase	complement(join(<90736..90896,90970..91058,91164..91235))	Acanthamoeba castellanii str. Neff	14924765
ACA1_024630	CDS	ACA1_024630	NW_004457656.1	1050	3299	D	encoded by transcript ACA1_024630A; uncharacterized protein	join(<1050..1203,1410..1451,1583..1644,1734..1859,1933..2026,2125..2205,2288..2380,2473..2558,2652..2719,2784..2898,2971..3113,3185..3299)	Acanthamoeba castellanii str. Neff	14924725
ACA1_024750	CDS	ACA1_024750	NW_004457656.1	5210	7710	D	encoded by transcript ACA1_024750A; uncharacterized protein	join(5210..5504,5588..5986,6612..6853,6929..7015,7090..7477,7558..7663,7695..7710)	Acanthamoeba castellanii str. Neff	14924718
ACA1_024960	CDS	ACA1_024960	NW_004457656.1	12464	17892	D	encoded by transcript ACA1_024960A; amine oxidase, flavincontaining superfamily protein	join(12464..12529,12722..12791,12899..13020,13128..13930,14033..14396,14533..14613,14702..14811,14914..14932,14992..15071,15161..15892,15979..16063,16134..16243,16421..16538,16621..16694,16776..16908,17020..17892)	Acanthamoeba castellanii str. Neff	14924719
ACA1_024970	CDS	ACA1_024970	NW_004457656.1	18263	19531	D	encoded by transcript ACA1_024970A; uncharacterized protein	18263..19531	Acanthamoeba castellanii str. Neff	14924720
ACA1_024980	CDS	ACA1_024980	NW_004457656.1	19935	23927	R	encoded by transcript ACA1_024980A; uncharacterized protein	complement(join(19935..20734,20861..21103,21277..21512,21899..22081,22178..22371,22465..22540,22625..22712,22824..22926,23028..23088,23176..23643,23755..23927))	Acanthamoeba castellanii str. Neff	14924721
ACA1_024990	CDS	ACA1_024990	NW_004457656.1	24393	25247	R	encoded by transcript ACA1_024990A; uncharacterized protein	complement(join(24393..24503,24591..25247))	Acanthamoeba castellanii str. Neff	14924722
ACA1_025000	CDS	ACA1_025000	NW_004457656.1	25648	30063	D	encoded by transcript ACA1_025000A; RhoGAP domain containing protein	join(25648..25769,26012..26150,26256..26342,26479..26578,26981..27098,27170..27281,27442..27457,27504..27675,27800..28092,28185..28260,28357..28484,28570..28687,28798..28923,29016..29121,29210..29406,29478..>30063)	Acanthamoeba castellanii str. Neff	14924723
ACA1_315270	CDS	ACA1_315270	NW_004457655.1	2008	2691	R	encoded by transcript ACA1_315270A; BRCA1 C Terminus (BRCT) domain containing protein	complement(<2008..2691)	Acanthamoeba castellanii str. Neff	14924717
ACA1_315380	CDS	ACA1_315380	NW_004457655.1	3697	4812	D	encoded by transcript ACA1_315380A; uncharacterized protein	join(3697..3931,4104..4250,4370..4471,4604..>4812)	Acanthamoeba castellanii str. Neff	14924716
ACA1_315490	CDS	ACA1_315490	NW_004457655.1	9417	10062	D	encoded by transcript ACA1_315490A; SPT2 chromatin protein	join(<9417..9539,9655..9860,9945..10062)	Acanthamoeba castellanii str. Neff	14924715
ACA1_067690	CDS	ACA1_067690	NW_004457654.1	646	1633	D	encoded by transcript ACA1_067690A; uncharacterized protein	join(646..715,774..970,1026..1529,1619..1633)	Acanthamoeba castellanii str. Neff	14924714
ACA1_067700	CDS	ACA1_067700	NW_004457654.1	2504	2719	D	encoded by transcript ACA1_067700A; uncharacterized protein	2504..2719	Acanthamoeba castellanii str. Neff	14924160
ACA1_067710	CDS	ACA1_067710	NW_004457654.1	4197	4436	R	encoded by transcript ACA1_067710A; uncharacterized protein	complement(4197..4436)	Acanthamoeba castellanii str. Neff	14924161
ACA1_067720	CDS	ACA1_067720	NW_004457654.1	5277	5549	D	encoded by transcript ACA1_067720A; uncharacterized protein	join(5277..5290,5339..5549)	Acanthamoeba castellanii str. Neff	14924162
ACA1_067730	CDS	ACA1_067730	NW_004457654.1	6197	7215	R	encoded by transcript ACA1_067730A; uncharacterized protein	complement(join(6197..6514,6835..6947,7017..7215))	Acanthamoeba castellanii str. Neff	14924163
ACA1_067740	CDS	ACA1_067740	NW_004457654.1	7357	8446	R	encoded by transcript ACA1_067740A; uncharacterized protein	complement(join(7357..7724,7876..8150,8409..8446))	Acanthamoeba castellanii str. Neff	14924164
ACA1_067750	CDS	ACA1_067750	NW_004457654.1	8839	9291	D	encoded by transcript ACA1_067750A; uncharacterized protein	<8839..9291	Acanthamoeba castellanii str. Neff	14924165
ACA1_067760	CDS	ACA1_067760	NW_004457654.1	10281	11289	R	encoded by transcript ACA1_067760A; uncharacterized protein	complement(join(10281..10366,10444..10582,10717..10909,11192..11289))	Acanthamoeba castellanii str. Neff	14924166
ACA1_067770	CDS	ACA1_067770	NW_004457654.1	11843	13106	D	encoded by transcript ACA1_067770A; CBS domain containing protein	join(11843..11938,12026..12224,12332..12696,12778..12864,12945..13106)	Acanthamoeba castellanii str. Neff	14924167
ACA1_067780	CDS	ACA1_067780	NW_004457654.1	13717	15149	D	encoded by transcript ACA1_067780A; uncharacterized protein	join(13717..13838,13921..13995,14052..14161,14236..14355,14431..14499,14569..14653,14686..14796,14879..15149)	Acanthamoeba castellanii str. Neff	14924168
ACA1_067790	CDS	ACA1_067790	NW_004457654.1	15950	17391	R	encoded by transcript ACA1_067790A; uncharacterized protein	complement(join(15950..16044,16228..16327,16400..16568,16655..16835,16915..16970,17114..17264,17352..17391))	Acanthamoeba castellanii str. Neff	14924169
ACA1_067800	CDS	ACA1_067800	NW_004457654.1	17497	18257	R	encoded by transcript ACA1_067800A; uncharacterized protein	complement(join(17497..17644,17764..17845,17896..18026,18133..18257))	Acanthamoeba castellanii str. Neff	14924170
ACA1_067810	CDS	ACA1_067810	NW_004457654.1	18556	27544	D	encoded by transcript ACA1_067810A; uncharacterized protein	join(18556..19312,19493..19560,19662..19772,19841..19967,20062..20612,20710..20801,20905..21059,21137..21300,21414..21521,21607..21743,21827..21960,22038..22117,22195..22290,22360..22440,22521..22613,22692..22861,22945..23136,23210..23321,23408..23559,23654..23813,23928..24025,24173..24329,24439..24602,24685..24763,24862..24972,25049..25155,25258..25330,25410..25619,25780..25920,26016..26108,26197..26342,26449..26587,26716..26802,26886..27053,27172..27303,27371..27544)	Acanthamoeba castellanii str. Neff	14924171
ACA1_067820	CDS	ACA1_067820	NW_004457654.1	27642	28794	D	encoded by transcript ACA1_067820A; DOCK family protein	join(27642..27765,27859..28007,28089..28221,28311..28418,28548..28633,28729..28794)	Acanthamoeba castellanii str. Neff	14924172
ACA1_067830	CDS	ACA1_067830	NW_004457654.1	28913	30718	R	encoded by transcript ACA1_067830A; peptidylprolyl cis-trans isomerase, putative	complement(join(28913..29035,29145..29687,29834..30408,30496..30718))	Acanthamoeba castellanii str. Neff	14924173
ACA1_067840	CDS	ACA1_067840	NW_004457654.1	31243	40590	D	encoded by transcript ACA1_067840A; variant sh3 domain containing protein	join(31243..31255,31278..31347,31420..31495,31582..31713,31810..31902,32005..32148,32260..32337,32428..32574,32653..32796,32897..32992,33056..33203,33286..33377,33436..33591,33679..33873,33967..34111,34198..34287,34361..34538,34631..34952,35034..35176,35267..35759,35832..36038,36137..36966,37103..37324,37411..37495,37592..37961,38065..38226,38340..38485,38575..38709,38815..38955,39056..39150,39238..39430,39532..39695,39791..39993,40076..40328,40446..40590)	Acanthamoeba castellanii str. Neff	14924174
ACA1_067850	CDS	ACA1_067850	NW_004457654.1	40682	41251	R	encoded by transcript ACA1_067850A; uncharacterized protein	complement(join(40682..40749,40832..41038,41146..41251))	Acanthamoeba castellanii str. Neff	14924175
ACA1_067860	CDS	ACA1_067860	NW_004457654.1	41631	42860	D	encoded by transcript ACA1_067860A; actin-1, putative	join(41631..41998,42101..42860)	Acanthamoeba castellanii str. Neff	14924176
ACA1_067870	CDS	ACA1_067870	NW_004457654.1	43330	44853	D	encoded by transcript ACA1_067870A; uncharacterized protein	join(43330..43429,43526..43662,43848..43964,44023..44214,44260..44367,44445..44565,44840..44853)	Acanthamoeba castellanii str. Neff	14924177
ACA1_067880	CDS	ACA1_067880	NW_004457654.1	45692	49206	D	encoded by transcript ACA1_067880A; GTPase activating protein	join(45692..45770,45888..46287,46391..47354,47452..48553,48630..48697,48805..49001,49083..49206)	Acanthamoeba castellanii str. Neff	14924178
ACA1_067890	CDS	ACA1_067890	NW_004457654.1	49289	52195	R	encoded by transcript ACA1_067890A; transporter, major facilitator subfamily protein	complement(join(49289..49655,49730..49817,49927..50019,50142..50265,50372..50449,50553..50687,50762..50850,50936..51024,51193..51316,51464..51591,51727..51835,51943..52195))	Acanthamoeba castellanii str. Neff	14924179
ACA1_067900	CDS	ACA1_067900	NW_004457654.1	52806	55543	R	encoded by transcript ACA1_067900A; WD repeatcontaining protein	complement(join(52806..52897,52970..53237,53316..53493,53595..53861,53930..54054,54151..54302,54396..54479,54573..54638,54737..54887,55262..55316,55395..55543))	Acanthamoeba castellanii str. Neff	14924180
ACA1_067910	CDS	ACA1_067910	NW_004457654.1	55915	56424	R	encoded by transcript ACA1_067910A; ribosomal protein S19, putative	complement(join(55915..56163,56245..56305,56396..>56424))	Acanthamoeba castellanii str. Neff	14924181
ACA1_067920	CDS	ACA1_067920	NW_004457654.1	56638	58107	D	encoded by transcript ACA1_067920A; uncharacterized protein	join(56638..56794,56869..57398,57486..57648,57749..58107)	Acanthamoeba castellanii str. Neff	14924182
ACA1_067930	CDS	ACA1_067930	NW_004457654.1	58927	62640	D	encoded by transcript ACA1_067930A; uncharacterized protein	join(58927..59306,59406..59492,59584..60137,60209..60254,60401..60972,61042..61311,61327..61396,61462..61609,61734..61744,61874..61941,62039..62131,62213..62319,62437..62640)	Acanthamoeba castellanii str. Neff	14924183
ACA1_067940	CDS	ACA1_067940	NW_004457654.1	62735	65600	D	encoded by transcript ACA1_067940A; Arf GTPase activating protein	join(62735..62872,62950..63046,63147..63280,63424..63633,63718..64778,65009..65600)	Acanthamoeba castellanii str. Neff	14924184
ACA1_067950	CDS	ACA1_067950	NW_004457654.1	66081	68441	D	encoded by transcript ACA1_067950A; uncharacterized protein	join(66081..66210,66374..66465,66576..66628,66743..67084,67175..67676,67746..68441)	Acanthamoeba castellanii str. Neff	14924185
ACA1_067960	CDS	ACA1_067960	NW_004457654.1	68569	69678	R	encoded by transcript ACA1_067960A; carrier superfamily protein	complement(68569..69678)	Acanthamoeba castellanii str. Neff	14924186
ACA1_067970	CDS	ACA1_067970	NW_004457654.1	69828	72211	R	encoded by transcript ACA1_067970A; RhoGAP domain containing protein	complement(join(69828..69896,69999..70209,70305..70457,70535..70650,70779..71004,71096..71185,71349..71416,71495..71971,72044..72211))	Acanthamoeba castellanii str. Neff	14924187
ACA1_067980	CDS	ACA1_067980	NW_004457654.1	73034	73696	R	encoded by transcript ACA1_067980A; uncharacterized protein	complement(join(73034..73063,73101..73244,73331..73384,73444..73539,73658..73696))	Acanthamoeba castellanii str. Neff	14924188
ACA1_067990	CDS	ACA1_067990	NW_004457654.1	74548	76079	R	encoded by transcript ACA1_067990A; uncharacterized protein	complement(join(74548..74590,74647..74800,75056..75096,75155..75275,75330..75963,76020..76079))	Acanthamoeba castellanii str. Neff	14924189
ACA1_068000	CDS	ACA1_068000	NW_004457654.1	76722	77259	R	encoded by transcript ACA1_068000A; uncharacterized protein	complement(join(76722..76825,76885..77095,77164..77259))	Acanthamoeba castellanii str. Neff	14924190
ACA1_068010	CDS	ACA1_068010	NW_004457654.1	79512	79884	R	encoded by transcript ACA1_068010A; uncharacterized protein	complement(join(79512..79615,79695..79884))	Acanthamoeba castellanii str. Neff	14924191
ACA1_068020	CDS	ACA1_068020	NW_004457654.1	80566	82195	D	encoded by transcript ACA1_068020A; uncharacterized protein	join(80566..81382,81460..81792,81962..82017,82070..82195)	Acanthamoeba castellanii str. Neff	14924713
ACA1_068030	CDS	ACA1_068030	NW_004457654.1	82300	83739	D	encoded by transcript ACA1_068030A; Gpatch domain containing protein	join(82300..82370,82443..82663,82746..82806,82879..83047,83115..83289,83381..83739)	Acanthamoeba castellanii str. Neff	14924192
ACA1_068040	CDS	ACA1_068040	NW_004457654.1	84050	87474	D	encoded by transcript ACA1_068040A; START domain containing protein	join(84050..84117,84215..84431,84506..84590,84659..84718,84800..85068,85144..85203,85283..85454,85533..85721,85802..85877,85971..86162,86252..86390,86494..87474)	Acanthamoeba castellanii str. Neff	14924193
ACA1_068050	CDS	ACA1_068050	NW_004457654.1	87659	96089	R	encoded by transcript ACA1_068050A; SH3 domain containing protein	complement(join(87659..87718,87979..88277,88353..88565,88639..88858,88964..89139,89253..89394,89479..89583,89663..89797,89929..90088,90175..90302,90393..90647,90786..90903,91007..91138,91240..91349,91473..91793,91869..92002,92082..92253,92331..92513,92600..92758,92840..93025,93104..93204,93289..93369,93459..93626,93707..93851,93945..94099,94186..94308,94403..94518,94592..94779,94866..95009,95086..95247,95350..95493,95598..95663,95734..95981,96047..96089))	Acanthamoeba castellanii str. Neff	14924194
ACA1_068060	CDS	ACA1_068060	NW_004457654.1	96434	98618	D	encoded by transcript ACA1_068060A; uncharacterized protein	join(96434..96644,96730..98618)	Acanthamoeba castellanii str. Neff	14924195
ACA1_068070	CDS	ACA1_068070	NW_004457654.1	99035	99854	D	encoded by transcript ACA1_068070A; small GTPbinding ADP-ribosylation factor	join(99035..99197,99260..99319,99394..99854)	Acanthamoeba castellanii str. Neff	14924196
ACA1_068080	CDS	ACA1_068080	NW_004457654.1	100116	103272	D	encoded by transcript ACA1_068080A; acyltransferase domain containing protein	join(100116..100227,100301..100323,100457..100600,100688..100950,101135..101257,101349..101481,101600..101679,101806..102183,102314..102393,102474..102571,102671..102798,102875..103027,103122..103272)	Acanthamoeba castellanii str. Neff	14924197
ACA1_068090	CDS	ACA1_068090	NW_004457654.1	103520	108995	R	encoded by transcript ACA1_068090A; WD domain, G-beta repeat-containing protein	complement(join(103520..103657,103753..103848,103919..104076,104144..104253,104434..104538,104626..104737,104820..104982,105068..105365,105472..105592,105715..105808,105889..105982,106084..106593,106666..107084,107157..107292,107373..107445,107538..107637,107804..107863,107883..107923,108035..108092,108174..108412,108495..108628,108737..108825,108945..108995))	Acanthamoeba castellanii str. Neff	14924198
ACA1_068100	CDS	ACA1_068100	NW_004457654.1	109458	110126	R	encoded by transcript ACA1_068100A; MAPEG domain containing protein	complement(join(109458..109566,109649..109761,109830..109958,110028..110126))	Acanthamoeba castellanii str. Neff	14924199
ACA1_068110	CDS	ACA1_068110	NW_004457654.1	110289	111024	D	encoded by transcript ACA1_068110A; peptidylprolyl cis-trans isomerase, FKBP-type domain containing protein	join(110289..110540,110612..110672,110732..110857,110921..111024)	Acanthamoeba castellanii str. Neff	14924200
ACA1_068120	CDS	ACA1_068120	NW_004457654.1	111369	112865	D	encoded by transcript ACA1_068120A; Endonuclease/Exonuclease/phosphatase family protein	join(111369..111667,111758..111854,111935..112027,112141..112208,112333..112432,112510..112614,112710..112865)	Acanthamoeba castellanii str. Neff	14924201
ACA1_068130	CDS	ACA1_068130	NW_004457654.1	113152	115491	R	encoded by transcript ACA1_068130A; uncharacterized protein	complement(join(113152..113977,114130..115257,115478..115491))	Acanthamoeba castellanii str. Neff	14924202
ACA1_068140	CDS	ACA1_068140	NW_004457654.1	115786	117477	R	encoded by transcript ACA1_068140A; sphinganine1-phosphate aldolase BST1, putative	complement(115786..117477)	Acanthamoeba castellanii str. Neff	14924203
ACA1_068150	CDS	ACA1_068150	NW_004457654.1	117960	120541	D	encoded by transcript ACA1_068150A; amino acid permease superfamily protein	join(117960..118059,118225..118399,118496..118692,118797..118900,118992..119127,119197..119319,119405..119527,119661..119813,119983..120129,120207..120320,120432..120541)	Acanthamoeba castellanii str. Neff	14924204
ACA1_068160	CDS	ACA1_068160	NW_004457654.1	120850	125841	R	encoded by transcript ACA1_068160A; Dual specificity protein kinase	complement(join(120850..121266,121386..121444,121542..121603,121743..121872,121976..122117,122427..122491,122604..122686,122775..122887,122982..123064,123164..123396,123471..123625,123862..123938,124033..124187,124288..124436,124539..124645,124774..124911,125024..125127,125158..125433,125478..125560,125674..125841))	Acanthamoeba castellanii str. Neff	14924205
ACA1_068170	CDS	ACA1_068170	NW_004457654.1	126048	126866	D	encoded by transcript ACA1_068170A; Mannosidase, beta A, lysosomal, putative	join(126048..126118,126199..126322,126436..126561,126645..126866)	Acanthamoeba castellanii str. Neff	14924206
ACA1_068180	CDS	ACA1_068180	NW_004457654.1	127132	130745	D	encoded by transcript ACA1_068180A; beta-mannosidase precursor mannanase mannase family protein	join(127132..127300,127317..127373,127452..127528,127614..127871,127966..128087,128192..128268,128356..128432,128504..128614,128688..128834,128926..129063,129162..129245,129377..129451,129543..129645,129737..129882,129967..130079,130164..130293,130377..130505,130602..130745)	Acanthamoeba castellanii str. Neff	14924207
ACA1_068190	CDS	ACA1_068190	NW_004457654.1	130910	135396	R	encoded by transcript ACA1_068190A; Dual specificity protein kinase	complement(join(130910..131187,131273..131599,131705..131819,131901..132012,132097..132241,132329..132419,132492..132656,132745..132925,133009..133134,133222..133684,133761..133940,134008..134164,134235..134294,134363..134503,134585..134684,134758..134891,135052..135122,135234..135396))	Acanthamoeba castellanii str. Neff	14924208
ACA1_068200	CDS	ACA1_068200	NW_004457654.1	136170	136659	D	encoded by transcript ACA1_068200A; MutS, putative	join(136170..136271,136419..136482,136541..136659)	Acanthamoeba castellanii str. Neff	14924209
ACA1_068210	CDS	ACA1_068210	NW_004457654.1	136907	138288	D	encoded by transcript ACA1_068210A; mutS, putative	join(136907..136933,136983..137015,137291..137303,137449..137519,137587..137620,137676..137752,137820..138011,138247..>138288)	Acanthamoeba castellanii str. Neff	14924210
ACA1_068220	CDS	ACA1_068220	NW_004457654.1	138577	140257	D	encoded by transcript ACA1_068220A; DNA mismatch repair protein	join(138577..138638,138699..138886,139087..139157,139226..139283,139339..139432,139494..139625,139692..139715,139781..140118,140193..140257)	Acanthamoeba castellanii str. Neff	14924211
ACA1_068230	CDS	ACA1_068230	NW_004457654.1	140320	142187	R	encoded by transcript ACA1_068230A; sphingosine kinase, putative	complement(join(140320..140558,140646..140917,140991..141096,141244..141348,141433..141492,141581..141677,141753..141838,141932..142187))	Acanthamoeba castellanii str. Neff	14924212
ACA1_068240	CDS	ACA1_068240	NW_004457654.1	142532	143871	D	encoded by transcript ACA1_068240A; endo-1,4-beta-glucanase, putative	join(142532..142889,143016..143294,143375..143595,143716..143871)	Acanthamoeba castellanii str. Neff	14924213
ACA1_068250	CDS	ACA1_068250	NW_004457654.1	144576	146976	D	encoded by transcript ACA1_068250A; uncharacterized protein	join(144576..144731,144894..145078,145152..145353,145439..145566,145674..145878,146165..146321,146481..146634,146690..146709,146789..146976)	Acanthamoeba castellanii str. Neff	14924214
ACA1_068260	CDS	ACA1_068260	NW_004457654.1	147055	148063	D	encoded by transcript ACA1_068260A; uncharacterized protein	join(147055..147233,147298..147536,147630..147759,147871..148063)	Acanthamoeba castellanii str. Neff	14924215
ACA1_068270	CDS	ACA1_068270	NW_004457654.1	148207	154262	R	encoded by transcript ACA1_068270A; phospholipidtranslocating P-type ATPase	complement(join(148207..148327,148394..148496,148597..148687,148835..148948,149046..149106,149184..149311,149420..149566,149682..149987,150091..150679,150777..150887,150982..151180,151268..151558,151661..151712,151743..152118,152187..152401,152516..152633,152702..152784,152883..152993,153093..153162,153245..153378,153461..153550,153652..153698,153720..153831,153928..154134,154203..154262))	Acanthamoeba castellanii str. Neff	14924216
ACA1_068280	CDS	ACA1_068280	NW_004457654.1	154404	155359	R	encoded by transcript ACA1_068280A; methyltransferase	complement(join(154404..154556,154625..155004,155069..155193,155256..155359))	Acanthamoeba castellanii str. Neff	14924217
ACA1_068290	CDS	ACA1_068290	NW_004457654.1	155439	155939	R	encoded by transcript ACA1_068290A; uncharacterized protein	complement(join(155439..155467,155482..155668,155730..155939))	Acanthamoeba castellanii str. Neff	14924218
ACA1_068300	CDS	ACA1_068300	NW_004457654.1	156112	157246	D	encoded by transcript ACA1_068300A; uncharacterized protein	join(156112..156324,156387..156474,156572..156606,156677..156817,156910..156969,157124..157246)	Acanthamoeba castellanii str. Neff	14924219
ACA1_068310	CDS	ACA1_068310	NW_004457654.1	157413	158464	D	encoded by transcript ACA1_068310A; uncharacterized protein	join(157413..157604,157674..157775,157843..157956,158019..158126,158201..158464)	Acanthamoeba castellanii str. Neff	14924220
ACA1_068320	CDS	ACA1_068320	NW_004457654.1	159303	169460	R	encoded by transcript ACA1_068320A; leucine rich repeat domain containing protein	complement(join(159303..159512,159633..160554,160671..160863,160967..161763,161829..163113,163222..163296,163404..164779,164852..165809,165899..166013,166080..166201,166277..166391,166457..166666,166757..166924,167010..167134,167222..167418,167511..167748,167828..167896,167970..168080,168161..168280,168379..168498,168669..168836,168929..169460))	Acanthamoeba castellanii str. Neff	14924221
ACA1_068330	CDS	ACA1_068330	NW_004457654.1	170077	174920	R	encoded by transcript ACA1_068330A; PGAP1 family protein	complement(join(170077..170458,170564..170784,170860..171058,171112..171430,171527..171659,171743..171816,171930..172259,172326..172451,172541..172589,172791..172869,172938..173116,173413..173592,173656..173708,173779..173849,173948..174075,174163..174291,174492..174920))	Acanthamoeba castellanii str. Neff	14924222
ACA1_068340	CDS	ACA1_068340	NW_004457654.1	175438	176879	R	encoded by transcript ACA1_068340A; 3hydroxyisobutyrate dehydrogenase	complement(join(175438..175620,175696..175805,175879..175938,176003..176090,176161..176252,176321..176684,176760..176879))	Acanthamoeba castellanii str. Neff	14924223
ACA1_068350	CDS	ACA1_068350	NW_004457654.1	177097	178377	D	encoded by transcript ACA1_068350A; uncharacterized protein	join(177097..177206,177292..177385,177469..177576,177651..177785,177856..177934,178007..178101,178174..178377)	Acanthamoeba castellanii str. Neff	14924224
ACA1_068360	CDS	ACA1_068360	NW_004457654.1	179002	181944	D	encoded by transcript ACA1_068360A; Dual specificity protein kinase	join(179002..179043,179133..179230,179334..179423,179498..179670,179762..179873,180006..180207,180294..180385,180459..180561,180640..180760,180844..180971,181060..181092,181169..181269,181349..181458,181559..181944)	Acanthamoeba castellanii str. Neff	14924225
ACA1_068370	CDS	ACA1_068370	NW_004457654.1	182834	184030	D	encoded by transcript ACA1_068370A; uncharacterized protein	join(182834..182884,182975..184030)	Acanthamoeba castellanii str. Neff	14924226
ACA1_068380	CDS	ACA1_068380	NW_004457654.1	184455	185433	R	encoded by transcript ACA1_068380A; uncharacterized protein	complement(join(184455..184661,184838..184922,185160..185252,185321..185433))	Acanthamoeba castellanii str. Neff	14924227
ACA1_068390	CDS	ACA1_068390	NW_004457654.1	185912	187222	R	encoded by transcript ACA1_068390A; uncharacterized protein	complement(join(185912..186378,186481..186577,186660..186759,186846..187023,187135..187222))	Acanthamoeba castellanii str. Neff	14924228
ACA1_068400	CDS	ACA1_068400	NW_004457654.1	187353	188009	D	encoded by transcript ACA1_068400A; uncharacterized protein	187353..188009	Acanthamoeba castellanii str. Neff	14924229
ACA1_068410	CDS	ACA1_068410	NW_004457654.1	188174	189897	R	encoded by transcript ACA1_068410A; ADPribosylation factor subfamily protein	complement(join(188174..188563,188688..189095,189201..189318,189404..189897))	Acanthamoeba castellanii str. Neff	14924230
ACA1_068420	CDS	ACA1_068420	NW_004457654.1	190056	192516	D	encoded by transcript ACA1_068420A; HTTM, putative	join(190056..190415,190520..190918,191013..191147,191204..191305,191392..192011,192124..192279,192357..192516)	Acanthamoeba castellanii str. Neff	14924231
ACA1_068430	CDS	ACA1_068430	NW_004457654.1	192559	193984	R	encoded by transcript ACA1_068430A; uncharacterized protein	complement(join(192559..192719,192853..192994,193078..193160,193242..193356,193436..193499,193611..193722,193813..193984))	Acanthamoeba castellanii str. Neff	14924232
ACA1_068440	CDS	ACA1_068440	NW_004457654.1	194090	195857	D	encoded by transcript ACA1_068440A; Fbox domain containing protein	join(194090..194224,194329..194803,194854..195006,195083..195180,195273..195393,195465..195541,195606..195676,195761..195857)	Acanthamoeba castellanii str. Neff	14924233
ACA1_068450	CDS	ACA1_068450	NW_004457654.1	196021	198795	R	encoded by transcript ACA1_068450A; twinarginine translocation pathway protein, putative	complement(join(196021..196269,196352..196436,196522..196741,196831..196974,197097..197156,197227..197386,197479..197649,197729..197838,197950..198159,198266..198398,198472..198633,198733..198795))	Acanthamoeba castellanii str. Neff	14924234
ACA1_068460	CDS	ACA1_068460	NW_004457654.1	199414	207574	R	encoded by transcript ACA1_068460A; leucinerich repeat kinase	complement(join(199414..199575,199667..199789,199892..200011,200127..200369,200495..200698,200789..200933,201012..201198,201300..201503,201592..201768,201844..202041,202140..202236,202336..202458,202567..202678,202807..203170,203260..203472,203552..203660,203783..203932,204019..204093,204192..204305,204415..204533,204617..204722,204797..204954,205039..205168,205266..205360,205470..205601,205690..205883,205969..206309,206424..206534,206644..206795,206905..207574))	Acanthamoeba castellanii str. Neff	14924235
ACA1_068470	CDS	ACA1_068470	NW_004457654.1	208351	210115	R	encoded by transcript ACA1_068470A; protein phosphatase 2C domain containing protein	complement(join(208351..208467,208584..208703,208805..209144,209262..209523,209613..209750,209851..210019,210086..210115))	Acanthamoeba castellanii str. Neff	14924236
ACA1_068480	CDS	ACA1_068480	NW_004457654.1	210143	212982	R	encoded by transcript ACA1_068480A; leucine rich repeat domain containing protein	complement(join(210143..210182,210229..210787,210865..211462,211536..211658,211765..212982))	Acanthamoeba castellanii str. Neff	14924237
ACA1_068490	CDS	ACA1_068490	NW_004457654.1	213520	215992	R	encoded by transcript ACA1_068490A; amino acid permease superfamily protein	complement(join(213520..213746,213809..213899,213979..214049,214163..214283,214350..214472,214672..214715,214793..214905,214977..215252,215344..215455,215541..215696,215776..215992))	Acanthamoeba castellanii str. Neff	14924238
ACA1_068500	CDS	ACA1_068500	NW_004457654.1	216178	218106	D	encoded by transcript ACA1_068500A; eukaryotic family protein	join(216178..216341,216445..216634,216730..216885,216973..217120,217205..217515,217602..217752,217826..218106)	Acanthamoeba castellanii str. Neff	14924239
ACA1_068510	CDS	ACA1_068510	NW_004457654.1	218483	219860	R	encoded by transcript ACA1_068510A; Tyrosine phosphatase	complement(join(218483..219358,219483..219860))	Acanthamoeba castellanii str. Neff	14924240
ACA1_068520	CDS	ACA1_068520	NW_004457654.1	220716	225043	D	encoded by transcript ACA1_068520A; uncharacterized protein	join(220716..220934,221008..221145,221247..221354,221630..221704,221789..221897,221951..222304,222430..222561,222681..223294,223398..223483,223559..223631,223677..223801,223889..223976,224224..224304,224493..224832,224943..225043)	Acanthamoeba castellanii str. Neff	14924241
ACA1_068530	CDS	ACA1_068530	NW_004457654.1	225254	228434	R	encoded by transcript ACA1_068530A; Metallophosphoesterase	complement(join(225254..225328,225409..225660,225873..225974,226072..226384,226475..226572,226676..226813,226979..227238,227295..227477,227570..228434))	Acanthamoeba castellanii str. Neff	14924242
ACA1_068540	CDS	ACA1_068540	NW_004457654.1	229323	229898	D	encoded by transcript ACA1_068540A; Prokumamolisin, activation domain containing protein	join(229323..229457,229572..229898)	Acanthamoeba castellanii str. Neff	14924243
ACA1_068550	CDS	ACA1_068550	NW_004457654.1	230303	230827	R	encoded by transcript ACA1_068550A; acetyltransferase, GNAT superfamily protein	complement(join(230303..230401,230477..230553,230640..230738,230791..230827))	Acanthamoeba castellanii str. Neff	14924244
ACA1_068560	CDS	ACA1_068560	NW_004457654.1	230876	231340	R	encoded by transcript ACA1_068560A; uncharacterized protein	complement(join(230876..231015,231091..231340))	Acanthamoeba castellanii str. Neff	14924245
ACA1_068570	CDS	ACA1_068570	NW_004457654.1	231597	232393	R	encoded by transcript ACA1_068570A; uncharacterized protein	complement(join(231597..231691,231736..232393))	Acanthamoeba castellanii str. Neff	14924246
ACA1_068580	CDS	ACA1_068580	NW_004457654.1	232623	233793	R	encoded by transcript ACA1_068580A; Gprotein alpha subunit	complement(join(232623..233255,233329..233793))	Acanthamoeba castellanii str. Neff	14924247
ACA1_068590	CDS	ACA1_068590	NW_004457654.1	234013	235873	R	encoded by transcript ACA1_068590A; RNA methyltransferase, TrmH superfamily protein	complement(join(234013..234303,234383..234519,234593..234696,234955..235035,235118..235214,235294..235374,235460..235568,235688..235873))	Acanthamoeba castellanii str. Neff	14924248
ACA1_068600	CDS	ACA1_068600	NW_004457654.1	236343	236534	D	encoded by transcript ACA1_068600A; uncharacterized protein	236343..236534	Acanthamoeba castellanii str. Neff	14924249
ACA1_068610	CDS	ACA1_068610	NW_004457654.1	236747	238050	R	encoded by transcript ACA1_068610A; PX domain containing protein	complement(join(236747..236908,236983..237156,237241..238050))	Acanthamoeba castellanii str. Neff	14924250
ACA1_068620	CDS	ACA1_068620	NW_004457654.1	238300	242210	R	encoded by transcript ACA1_068620A; uncharacterized protein	complement(join(238300..238624,238716..238849,239094..239316,239417..239817,239921..240046,240150..240313,240408..240525,240639..240766,240844..240917,241035..241137,241217..241302,241399..241536,241636..241745,241844..241992,242159..242210))	Acanthamoeba castellanii str. Neff	14924251
ACA1_068630	CDS	ACA1_068630	NW_004457654.1	242931	243753	D	encoded by transcript ACA1_068630A; polymorphic outer membrane protein	join(242931..243205,243300..243753)	Acanthamoeba castellanii str. Neff	14924252
ACA1_068640	CDS	ACA1_068640	NW_004457654.1	244036	245770	D	encoded by transcript ACA1_068640A; sarcosine oxidase	join(244036..244238,244332..244473,244570..244743,244814..245008,245083..245188,245262..245464,245537..245676,245734..245770)	Acanthamoeba castellanii str. Neff	14924253
ACA1_068650	CDS	ACA1_068650	NW_004457654.1	246218	249260	D	encoded by transcript ACA1_068650A; Citrate transporter	join(246218..246513,246561..246592,246673..246968,247052..247108,247190..247292,247373..247550,247622..247841,247921..248163,248251..248514,248585..248708,248775..248960,249082..249260)	Acanthamoeba castellanii str. Neff	14924254
ACA1_068660	CDS	ACA1_068660	NW_004457654.1	249445	251915	D	encoded by transcript ACA1_068660A; Fbox domain containing protein	join(249445..249707,249769..249956,250226..250291,250365..250527,250654..250768,250876..250969,251068..251373,251452..251595,251674..251915)	Acanthamoeba castellanii str. Neff	14924255
ACA1_068670	CDS	ACA1_068670	NW_004457654.1	252035	255006	R	encoded by transcript ACA1_068670A; dihydrolipoyl dehydrogenase	complement(join(252035..252097,252192..252281,252357..252433,252752..252913,253012..253171,253254..253452,253543..253631,253916..254017,254106..254249,254329..254429,254499..254634,254703..254788,254892..255006))	Acanthamoeba castellanii str. Neff	14924256
ACA1_068680	CDS	ACA1_068680	NW_004457654.1	255268	255760	D	encoded by transcript ACA1_068680A; ribosomal L37ae protein family	join(255268..255270,255420..255631,255697..255760)	Acanthamoeba castellanii str. Neff	14924257
ACA1_068690	CDS	ACA1_068690	NW_004457654.1	255836	256107	R	encoded by transcript ACA1_068690A; RNA polymerase II transcription factor B subunit 5, putative	complement(join(255836..256010,256073..256107))	Acanthamoeba castellanii str. Neff	14924258
ACA1_068700	CDS	ACA1_068700	NW_004457654.1	256634	259455	D	encoded by transcript ACA1_068700A; Ser/Thr phosphatase family superfamily protein	join(256634..256698,256753..256826,256890..257098,257283..257355,257430..257528,257608..257668,257769..257873,257969..258101,258164..258233,258307..258400,258479..258575,258650..258710,258784..258915,258993..259077,259171..259259,259352..259455)	Acanthamoeba castellanii str. Neff	14924259
ACA1_068710	CDS	ACA1_068710	NW_004457654.1	260045	262268	D	encoded by transcript ACA1_068710A; 5'nucleotidase, C-terminal domain containing protein	join(260045..260123,260342..260458,260525..260617,260694..260812,260882..261038,261131..261206,261282..261362,261432..261495,261560..261686,261760..261840,261916..262019,262104..262268)	Acanthamoeba castellanii str. Neff	14924260
ACA1_068720	CDS	ACA1_068720	NW_004457654.1	263191	265898	D	encoded by transcript ACA1_068720A; WD repeatcontaining protein	join(263191..263264,263335..263416,263488..263553,263642..263777,263988..264071,264160..264311,264426..264550,264623..264755,264998..265074,265162..265270,265367..265469,265557..265640,265726..265794,265819..265898)	Acanthamoeba castellanii str. Neff	14924261
ACA1_068730	CDS	ACA1_068730	NW_004457654.1	266468	267053	D	encoded by transcript ACA1_068730A; ubiquitinfusion protein	join(266468..266572,266665..266878,266947..267053)	Acanthamoeba castellanii str. Neff	14924262
ACA1_068740	CDS	ACA1_068740	NW_004457654.1	267350	269246	D	encoded by transcript ACA1_068740A; tRNAdihydrouridine synthase A, putative	join(267350..267386,267469..267538,267634..267805,267891..267992,268087..268490,268561..268724,268798..268918,269006..269246)	Acanthamoeba castellanii str. Neff	14924263
ACA1_068750	CDS	ACA1_068750	NW_004457654.1	269696	270070	R	encoded by transcript ACA1_068750A; ribosomal protein L35, putative	complement(269696..270070)	Acanthamoeba castellanii str. Neff	14924264
ACA1_068760	CDS	ACA1_068760	NW_004457654.1	270567	272951	D	encoded by transcript ACA1_068760A; uncharacterized protein	join(270567..270658,270731..270840,270941..271093,271185..271360,271394..271503,271574..271733,271823..271879,272011..272053,272129..272368,272449..272526,272597..272691,272769..272951)	Acanthamoeba castellanii str. Neff	14924265
ACA1_068770	CDS	ACA1_068770	NW_004457654.1	273005	274347	R	encoded by transcript ACA1_068770A; XYPPX repeat-containing protein	complement(join(273005..273571,273715..274128,274258..274347))	Acanthamoeba castellanii str. Neff	14924266
ACA1_068780	CDS	ACA1_068780	NW_004457654.1	274587	276610	R	encoded by transcript ACA1_068780A; ankyrin repeat protein	complement(join(274587..274684,274775..274820,274902..275019,275104..275186,275270..275366,275453..275578,275660..275715,275842..276017,276087..276245,276273..276407,276484..276610))	Acanthamoeba castellanii str. Neff	14924267
ACA1_068790	CDS	ACA1_068790	NW_004457654.1	277066	277383	D	encoded by transcript ACA1_068790A; uncharacterized protein	join(277066..277157,277254..277383)	Acanthamoeba castellanii str. Neff	14924268
ACA1_068800	CDS	ACA1_068800	NW_004457654.1	277512	282599	R	encoded by transcript ACA1_068800A; Peroxin 6 (Pex6), putative	complement(join(277512..277810,277913..278059,278151..278276,278374..278504,278587..278703,278815..278918,278997..279140,279228..279388,279452..279604,279684..279843,279927..280073,280159..280611,280696..280872,280967..281088,281118..281729,281798..282180,282233..282307,282508..282599))	Acanthamoeba castellanii str. Neff	14924269
ACA1_068810	CDS	ACA1_068810	NW_004457654.1	283193	284786	D	encoded by transcript ACA1_068810A; bZIP transcription factor domain containing protein	join(283193..283731,283837..284226,284337..284421,284496..284786)	Acanthamoeba castellanii str. Neff	14924270
ACA1_068820	CDS	ACA1_068820	NW_004457654.1	285332	292008	D	encoded by transcript ACA1_068820A; glycosyl hydrolases family 38 Nterminal domain containing protein	join(285332..285541,285584..285675,285790..285884,285959..286077,286190..286285,286369..286566,286643..286748,286830..286885,286951..287043,287144..287215,287299..287391,287474..287581,287690..287812,287898..288064,288152..288288,288377..288510,288606..288752,288838..288950,289018..289083,289171..289303,289388..289494,289585..289772,289851..289942,290026..290152,290239..290343,290418..290749,290884..291106,291146..291237,291314..291468,291541..291701,291950..292008)	Acanthamoeba castellanii str. Neff	14924271
ACA1_068830	CDS	ACA1_068830	NW_004457654.1	292303	297755	D	encoded by transcript ACA1_068830A; efflux ABC transporter, permease domain containing protein	join(292303..292497,292604..292687,292812..292915,292985..293049,293133..293293,293398..293541,293641..293747,293829..293896,293983..294222,294293..294533,294609..294691,294814..294912,294987..295079,295113..295331,295426..295882,296005..296090,296185..296286,296388..296535,296614..296765,296890..297020,297087..297261,297354..297458,297568..297755)	Acanthamoeba castellanii str. Neff	14924272
ACA1_068840	CDS	ACA1_068840	NW_004457654.1	297829	298854	R	encoded by transcript ACA1_068840A; uncharacterized protein	complement(join(297829..297993,298050..298306,298400..298609,298731..298854))	Acanthamoeba castellanii str. Neff	14924273
ACA1_068850	CDS	ACA1_068850	NW_004457654.1	299016	300386	R	encoded by transcript ACA1_068850A; uncharacterized protein	complement(299016..300386)	Acanthamoeba castellanii str. Neff	14924274
ACA1_068860	CDS	ACA1_068860	NW_004457654.1	301281	302693	D	encoded by transcript ACA1_068860A; uncharacterized protein	301281..302693	Acanthamoeba castellanii str. Neff	14924275
ACA1_068870	CDS	ACA1_068870	NW_004457654.1	302902	304304	D	encoded by transcript ACA1_068870A; uncharacterized protein	join(302902..303716,303808..303892,303963..304094,304167..304304)	Acanthamoeba castellanii str. Neff	14924276
ACA1_068880	CDS	ACA1_068880	NW_004457654.1	304422	307914	D	encoded by transcript ACA1_068880A; WD domain, G-beta repeat-containing protein	join(304422..304433,304530..304628,304699..304812,304877..304996,305071..305196,305287..305512,305592..305737,305821..307914)	Acanthamoeba castellanii str. Neff	14924277
ACA1_068890	CDS	ACA1_068890	NW_004457654.1	308086	308985	D	encoded by transcript ACA1_068890A; uncharacterized protein	join(308086..308100,308173..308344,308561..308712,308839..308985)	Acanthamoeba castellanii str. Neff	14924278
ACA1_068900	CDS	ACA1_068900	NW_004457654.1	309116	311195	D	encoded by transcript ACA1_068900A; Fbox domain containing protein	join(309116..309357,309426..309561,309751..309909,310226..310310,310509..310591,310669..310796,310879..310990,311079..311195)	Acanthamoeba castellanii str. Neff	14924279
ACA1_068910	CDS	ACA1_068910	NW_004457654.1	311582	311868	D	encoded by transcript ACA1_068910A; uncharacterized protein	join(311582..311616,311682..311868)	Acanthamoeba castellanii str. Neff	14924280
ACA1_068920	CDS	ACA1_068920	NW_004457654.1	311919	313750	D	encoded by transcript ACA1_068920A; WD domain, G-beta repeat-containing protein	join(311919..311985,312064..312129,312213..312327,312413..312527,312603..312659,312808..312968,313042..313199,313270..313416,313491..313750)	Acanthamoeba castellanii str. Neff	14924281
ACA1_068930	CDS	ACA1_068930	NW_004457654.1	313849	315312	D	encoded by transcript ACA1_068930A; serine/threonine protein kinase	313849..315312	Acanthamoeba castellanii str. Neff	14924282
ACA1_068940	CDS	ACA1_068940	NW_004457654.1	315378	315659	R	encoded by transcript ACA1_068940A; uncharacterized protein	complement(315378..315659)	Acanthamoeba castellanii str. Neff	14924283
ACA1_068950	CDS	ACA1_068950	NW_004457654.1	315894	317666	D	encoded by transcript ACA1_068950A; uncharacterized protein	join(315894..315939,316029..316167,316285..316421,316627..316726,316824..316901,316990..317063,317142..317227,317352..317666)	Acanthamoeba castellanii str. Neff	14924284
ACA1_068960	CDS	ACA1_068960	NW_004457654.1	317864	322104	R	encoded by transcript ACA1_068960A; uncharacterized protein	complement(join(317864..318530,318661..318754,318872..319028,319106..319230,319302..319359,319437..319500,319577..319825,319914..320230,320351..320430,320505..320601,320685..320790,320922..321132,321199..321534,321608..321744,321857..322104))	Acanthamoeba castellanii str. Neff	14924285
ACA1_068970	CDS	ACA1_068970	NW_004457654.1	322696	325541	R	encoded by transcript ACA1_068970A; protein kinase	complement(join(322696..322839,322929..323033,323113..323184,323256..323414,323495..323514,323657..323749,323823..323905,323948..324048,324120..324808,324888..324977,325304..325541))	Acanthamoeba castellanii str. Neff	14924286
ACA1_068980	CDS	ACA1_068980	NW_004457654.1	326290	329478	D	encoded by transcript ACA1_068980A; uncharacterized protein	join(326290..326350,326382..326509,326588..326654,326726..326847,326913..326969,327086..327224,327471..327619,327714..327804,327874..327931,328051..328127,328240..328336,328441..328698,328830..328914,329023..329124,329194..329295,329380..329478)	Acanthamoeba castellanii str. Neff	14924287
ACA1_068990	CDS	ACA1_068990	NW_004457654.1	329930	331151	R	encoded by transcript ACA1_068990A; beta actin, putative	complement(join(329930..330202,330288..330368,330411..331151))	Acanthamoeba castellanii str. Neff	14924288
ACA1_069000	CDS	ACA1_069000	NW_004457654.1	331368	331949	R	encoded by transcript ACA1_069000A; cupin 2 domain containing protein	complement(join(331368..331486,331605..331706,331787..331949))	Acanthamoeba castellanii str. Neff	14924289
ACA1_069010	CDS	ACA1_069010	NW_004457654.1	332323	342061	R	encoded by transcript ACA1_069010A; tetratricopeptide repeat domain containing protein	complement(join(332323..332444,332523..332703,332775..332909,333014..333051,333174..333250,333346..333402,333503..333574,333687..333801,333890..333938,334026..334077,334162..334247,334321..334529,334644..334731,334832..334957,335084..335186,335276..335408,335504..335640,335659..335696,335805..335905,335983..336093,336168..336249,336374..336653,336758..336945,337026..337094,337324..337439,337526..337648,337755..337872,337965..338053,338131..338185,338259..338329,338414..338651,338748..338913,339028..339149,339214..339310,339413..339699,339796..339863,339941..340235,340329..340474,340566..340696,340794..340929,341006..341054,341122..341207,341308..341365,341454..341638,341722..341854,341941..342038,342049..342061))	Acanthamoeba castellanii str. Neff	14924290
ACA1_069020	CDS	ACA1_069020	NW_004457654.1	342505	343743	R	encoded by transcript ACA1_069020A; thioredoxin domain containing protein	complement(join(342505..342688,342785..342830,342897..343015,343094..343149,343169..343233,343432..343538,343604..343743))	Acanthamoeba castellanii str. Neff	14924291
ACA1_069030	CDS	ACA1_069030	NW_004457654.1	344059	344322	D	encoded by transcript ACA1_069030A; uncharacterized protein	344059..344322	Acanthamoeba castellanii str. Neff	14924292
ACA1_069040	CDS	ACA1_069040	NW_004457654.1	344446	345243	D	encoded by transcript ACA1_069040A; uncharacterized protein	join(344446..344519,344644..344868,344906..345029,345106..345243)	Acanthamoeba castellanii str. Neff	14924293
ACA1_069050	CDS	ACA1_069050	NW_004457654.1	345333	346363	R	encoded by transcript ACA1_069050A; uncharacterized protein	complement(join(345333..345732,345801..345920,345978..346063,346118..346167,346261..346363))	Acanthamoeba castellanii str. Neff	14924294
ACA1_069060	CDS	ACA1_069060	NW_004457654.1	346629	347126	D	encoded by transcript ACA1_069060A; uncharacterized protein	join(346629..346886,346905..347126)	Acanthamoeba castellanii str. Neff	14924295
ACA1_069070	CDS	ACA1_069070	NW_004457654.1	347221	348405	R	encoded by transcript ACA1_069070A; animal heme peroxidase family protein; uncharacterized protein	complement(join(347221..347374,347450..347637,347703..347776,347850..347978,348061..348205,348268..348405))	Acanthamoeba castellanii str. Neff	14924296
ACA1_069080	CDS	ACA1_069080	NW_004457654.1	349760	353292	D	encoded by transcript ACA1_069080A; uncharacterized protein	join(349760..349797,349862..349931,350009..350051,350119..350186,350339..350666,350741..350845,350941..351436,351512..351569,351676..351780,351868..352057,352116..352297,352370..352429,352531..352576,352841..352929,353012..353086,353218..353292)	Acanthamoeba castellanii str. Neff	14924297
ACA1_069090	CDS	ACA1_069090	NW_004457654.1	353423	353956	R	encoded by transcript ACA1_069090A; uncharacterized protein	complement(353423..353956)	Acanthamoeba castellanii str. Neff	14924298
ACA1_069100	CDS	ACA1_069100	NW_004457654.1	354388	356286	D	encoded by transcript ACA1_069100A; ribonuclease z, putative	join(354388..354480,354538..354645,354737..354805,354893..355004,355095..355208,355280..355344,355438..355575,355667..355745,355827..355905,356139..356286)	Acanthamoeba castellanii str. Neff	14924299
ACA1_069110	CDS	ACA1_069110	NW_004457654.1	356892	358007	D	encoded by transcript ACA1_069110A; Ras small GTPbinding protein	join(356892..356963,357145..357200,357470..357652,357746..358007)	Acanthamoeba castellanii str. Neff	14924300
ACA1_069120	CDS	ACA1_069120	NW_004457654.1	359228	361466	R	encoded by transcript ACA1_069120A; uncharacterized protein	complement(join(359228..359395,359474..359572,359648..359713,359810..359923,360069..360194,360316..360591,360708..360771,360914..361014,361104..361241,361374..361466))	Acanthamoeba castellanii str. Neff	14924301
ACA1_069130	CDS	ACA1_069130	NW_004457654.1	362148	363212	D	encoded by transcript ACA1_069130A; phosphoglycerate mutase family domain containing protein	join(362148..362259,362353..363212)	Acanthamoeba castellanii str. Neff	14924302
ACA1_069140	CDS	ACA1_069140	NW_004457654.1	363717	365242	R	encoded by transcript ACA1_069140A; NUDIX family hydrolase, putative	complement(join(363717..364577,364655..364875,364940..365066,365234..365242))	Acanthamoeba castellanii str. Neff	14924303
ACA1_069150	CDS	ACA1_069150	NW_004457654.1	365804	367801	D	encoded by transcript ACA1_069150A; PH domain containing protein	join(365804..365943,366056..366155,366260..366361,366451..367401,367478..367644,367720..367801)	Acanthamoeba castellanii str. Neff	14924304
ACA1_069160	CDS	ACA1_069160	NW_004457654.1	368515	372311	D	encoded by transcript ACA1_069160A; Serine/threonineprotein kinase SNF1-like protein	join(368515..368740,368934..369055,369151..369237,369325..369418,369492..369561,369625..369729,369864..369991,370079..370146,370254..370541,370630..370734,370841..370934,371062..371147,371243..371370,371425..371446,371510..371666,371752..371843,371947..372051,372126..372311)	Acanthamoeba castellanii str. Neff	14924305
ACA1_069170	CDS	ACA1_069170	NW_004457654.1	372441	376352	R	encoded by transcript ACA1_069170A; uncharacterized protein	complement(join(372441..372743,372846..372932,373038..373280,373379..373518,373601..373940,374192..374270,374364..374479,374599..374775,374890..375007,375109..375293,375409..375483,375601..375675,375913..376002,376176..376352))	Acanthamoeba castellanii str. Neff	14924306
ACA1_069180	CDS	ACA1_069180	NW_004457654.1	376807	377094	R	encoded by transcript ACA1_069180A; uncharacterized protein	complement(376807..377094)	Acanthamoeba castellanii str. Neff	14924307
ACA1_069190	CDS	ACA1_069190	NW_004457654.1	377505	379273	D	encoded by transcript ACA1_069190A; ribokinase, putative	join(377505..377594,377664..377964,378035..378149,378218..378298,378374..378556,378626..378800,378869..378968,379038..379154,379242..379273)	Acanthamoeba castellanii str. Neff	14924308
ACA1_069200	CDS	ACA1_069200	NW_004457654.1	379700	383506	D	encoded by transcript ACA1_069200A; uncharacterized protein	join(379700..380260,380457..380521,380623..380714,380824..380995,381127..381380,381452..381549,381665..381767,381860..381921,382085..382291,382412..382563,382695..382799,382893..383135,383230..383273,383305..383368,383452..383506)	Acanthamoeba castellanii str. Neff	14924309
ACA1_069210	CDS	ACA1_069210	NW_004457654.1	383669	384821	R	encoded by transcript ACA1_069210A; uncharacterized protein	complement(join(383669..383908,383990..384310,384414..384821))	Acanthamoeba castellanii str. Neff	14924310
ACA1_069220	CDS	ACA1_069220	NW_004457654.1	385073	386640	R	encoded by transcript ACA1_069220A; WD domain, G-beta repeat-containing protein	complement(join(385073..385349,385598..385859,385943..385988,386060..386173,386277..386363,386438..386500,386566..>386640))	Acanthamoeba castellanii str. Neff	14924311
ACA1_069230	CDS	ACA1_069230	NW_004457654.1	386959	388729	D	encoded by transcript ACA1_069230A; sister chromatid cohesion protein dcc1, putative	join(386959..387065,387123..387206,387306..387337,387400..387548,387610..387682,387760..387797,387869..387956,388022..388137,388209..388325,388402..388550,388633..388729)	Acanthamoeba castellanii str. Neff	14924312
ACA1_069240	CDS	ACA1_069240	NW_004457654.1	388890	390222	D	encoded by transcript ACA1_069240A; tRNA pseudouridine synthase B, putative	join(388890..389082,389202..389234,389322..389377,389450..389560,389632..389723,389794..389908,390055..390222)	Acanthamoeba castellanii str. Neff	14924313
ACA1_069250	CDS	ACA1_069250	NW_004457654.1	390356	391473	D	encoded by transcript ACA1_069250A; uncharacterized protein	join(390356..390470,390642..390824,390990..391074,391119..391473)	Acanthamoeba castellanii str. Neff	14924314
ACA1_069260	CDS	ACA1_069260	NW_004457654.1	391524	396190	R	encoded by transcript ACA1_069260A; uncharacterized protein	complement(join(391524..391656,391731..391867,391928..391964,392045..392182,392261..392326,392441..392504,392568..392975,393091..393348,393446..393534,393627..393702,393773..393910,394012..394149,394237..394518,394617..394760,394873..394969,395046..395197,395288..395446,395559..395662,395786..395882,396010..396190))	Acanthamoeba castellanii str. Neff	14924315
ACA1_069270	CDS	ACA1_069270	NW_004457654.1	396726	399289	R	encoded by transcript ACA1_069270A; RhoGEF domain containing protein	complement(join(396726..396854,396936..397025,397099..397184,397251..397391,397496..397688,397768..397813,398061..398145,398217..398280,398354..398499,398620..398818,398914..398964,399031..399074,399187..399289))	Acanthamoeba castellanii str. Neff	14924316
ACA1_069280	CDS	ACA1_069280	NW_004457654.1	399977	401192	D	encoded by transcript ACA1_069280A; leucine zipper protein	join(<399977..400175,400312..400480,400569..400699,400791..400873,400951..401047,401128..401192)	Acanthamoeba castellanii str. Neff	14924317
ACA1_069290	CDS	ACA1_069290	NW_004457654.1	401874	403806	D	encoded by transcript ACA1_069290A; dual specificity phosphatase, catalytic domain containing protein	join(401874..401882,401979..402114,402186..402385,402468..402569,402637..402707,402826..402951,403050..403260,403371..403556,403648..403806)	Acanthamoeba castellanii str. Neff	14924318
ACA1_069300	CDS	ACA1_069300	NW_004457654.1	404475	405266	R	encoded by transcript ACA1_069300A; uncharacterized protein	complement(join(404475..405113,405192..405266))	Acanthamoeba castellanii str. Neff	14924319
ACA1_069310	CDS	ACA1_069310	NW_004457654.1	405412	407947	R	encoded by transcript ACA1_069310A; CTP synthase	complement(join(405412..405846,405920..406066,406163..406297,406433..406730,406820..406980,407059..407201,407291..407441,407506..407634,407774..407947))	Acanthamoeba castellanii str. Neff	14924320
ACA1_069320	CDS	ACA1_069320	NW_004457654.1	408593	410125	D	encoded by transcript ACA1_069320A; eukaryotic initiation factor, putative	join(408593..408598,408808..409200,409346..409362,409455..409632,409713..409849,410008..410125)	Acanthamoeba castellanii str. Neff	14924321
ACA1_069330	CDS	ACA1_069330	NW_004457654.1	410477	411059	R	encoded by transcript ACA1_069330A; ribosomal protein s24e, putative	complement(join(410477..410590,410664..410876,410994..411059))	Acanthamoeba castellanii str. Neff	14924322
ACA1_069340	CDS	ACA1_069340	NW_004457654.1	413125	416390	R	encoded by transcript ACA1_069340A; uncharacterized protein	complement(join(413125..413133,413320..413397,413467..413563,413631..413691,413777..413864,413943..413987,414032..414111,414191..414272,414369..414479,414547..414617,414699..414774,414863..414946,415058..415120,415201..415406,415485..415584,415660..415739,415821..415935,416016..416061,416248..416390))	Acanthamoeba castellanii str. Neff	14924323
ACA1_069350	CDS	ACA1_069350	NW_004457654.1	416775	420059	R	encoded by transcript ACA1_069350A; Alg9 family mannosyltransferase family protein	complement(join(416775..417014,417074..417182,417334..417418,417508..417604,417678..417750,417846..417945,418063..418132,418227..418322,418397..418624,418763..418911,419036..419130,419272..419369,419451..419538,419613..419723,419808..419907,419966..420059))	Acanthamoeba castellanii str. Neff	14924324
ACA1_069360	CDS	ACA1_069360	NW_004457654.1	420309	421006	D	encoded by transcript ACA1_069360A; uncharacterized protein	join(420309..420336,420457..420527,420608..421006)	Acanthamoeba castellanii str. Neff	14924325
ACA1_069370	CDS	ACA1_069370	NW_004457654.1	421197	421952	D	encoded by transcript ACA1_069370A; S25 ribosomal protein	join(421197..421271,421345..421392,421527..421643,421714..421911,421947..421952)	Acanthamoeba castellanii str. Neff	14924326
ACA1_069380	CDS	ACA1_069380	NW_004457654.1	422804	427070	D	encoded by transcript ACA1_069380A; lipin, Nterminal containing protein	join(422804..422950,423072..423155,423218..423283,423407..423568,423651..423753,423837..423907,424012..424176,424255..424419,424539..425300,425413..425519,425636..425840,425952..426020,426096..426297,426393..426529,426605..426825,426899..427070)	Acanthamoeba castellanii str. Neff	14924327
ACA1_069390	CDS	ACA1_069390	NW_004457654.1	427153	428190	R	encoded by transcript ACA1_069390A; F-box domain containing protein	complement(join(427153..427357,427443..427533,427618..427734,427816..427910,427976..428190))	Acanthamoeba castellanii str. Neff	14924328
ACA1_069400	CDS	ACA1_069400	NW_004457654.1	428406	430076	D	encoded by transcript ACA1_069400A; PH domain containing protein	join(428406..428603,428729..428800,428875..428926,428969..429052,429138..429428,429466..429544,429627..429776,429866..430076)	Acanthamoeba castellanii str. Neff	14924329
ACA1_069410	CDS	ACA1_069410	NW_004457654.1	430787	431907	D	encoded by transcript ACA1_069410A; zinc finger, C3HC4 type (RING finger) domain containing protein	join(430787..430824,430878..431052,431150..431217,431291..431391,431460..431541,431613..431688,431857..431907)	Acanthamoeba castellanii str. Neff	14924330
ACA1_069420	CDS	ACA1_069420	NW_004457654.1	431979	434622	R	encoded by transcript ACA1_069420A; RhoGEF domain containing protein	complement(join(431979..432837,432907..433451,433537..433731,433817..434059,434143..434622))	Acanthamoeba castellanii str. Neff	14924331
ACA1_069430	CDS	ACA1_069430	NW_004457654.1	436213	439367	D	encoded by transcript ACA1_069430A; cullin 4B, putative	join(436213..436306,436389..436504,436614..436793,436885..437184,437256..437468,437541..437693,437773..437919,437986..438279,438379..438579,438695..438940,439030..439182,439272..439367)	Acanthamoeba castellanii str. Neff	14924332
ACA1_069440	CDS	ACA1_069440	NW_004457654.1	439718	443855	D	encoded by transcript ACA1_069440A; protein phosphatase 2C domain containing protein	join(439718..439846,440010..440160,440292..440369,440487..440641,440734..440853,440968..441137,441237..441339,441420..441623,441705..442175,442235..442309,442540..442815,442914..443156,443245..443534,443633..443855)	Acanthamoeba castellanii str. Neff	14924333
ACA1_069450	CDS	ACA1_069450	NW_004457654.1	444709	447262	D	encoded by transcript ACA1_069450A; uncharacterized protein	join(444709..444744,444789..444832,445026..445120,445256..445435,445503..445649,445745..445846,445947..446059,446288..446425,446515..446625,446776..446937,447047..447262)	Acanthamoeba castellanii str. Neff	14924334
ACA1_069460	CDS	ACA1_069460	NW_004457654.1	447548	448325	D	encoded by transcript ACA1_069460A; uncharacterized protein	join(447548..447666,447743..448325)	Acanthamoeba castellanii str. Neff	14924335
ACA1_069470	CDS	ACA1_069470	NW_004457654.1	449008	449969	R	encoded by transcript ACA1_069470A; uncharacterized protein	complement(join(449008..449412,449428..449803,449890..449969))	Acanthamoeba castellanii str. Neff	14924336
ACA1_069480	CDS	ACA1_069480	NW_004457654.1	450017	452929	R	encoded by transcript ACA1_069480A; transporter, major facilitator subfamily protein	complement(join(450017..450210,450304..450442,450519..450698,450766..450852,450945..451029,451135..451206,451273..451325,451405..451461,451543..451679,451776..451842,451946..452045,452135..452191,452296..452405,452487..452554,452646..452669,452815..452929))	Acanthamoeba castellanii str. Neff	14924337
ACA1_069490	CDS	ACA1_069490	NW_004457654.1	453253	455220	D	encoded by transcript ACA1_069490A; uncharacterized protein	join(453253..453337,453436..453492,453514..453721,453811..453918,454057..454414,454488..454728,454844..454962,455026..455220)	Acanthamoeba castellanii str. Neff	14924338
ACA1_069500	CDS	ACA1_069500	NW_004457654.1	455256	457562	R	encoded by transcript ACA1_069500A; uncharacterized protein	complement(join(455256..455425,455503..455578,455704..455831,455922..455982,456106..456177,456254..456381,456468..456606,456724..456830,456934..457063,457152..457562))	Acanthamoeba castellanii str. Neff	14924339
ACA1_069510	CDS	ACA1_069510	NW_004457654.1	458177	460533	R	encoded by transcript ACA1_069510A; uncharacterized protein	complement(join(458177..458301,458358..458465,458635..458761,458859..458991,459063..459159,459309..459514,459630..459844,459917..460025,460313..460533))	Acanthamoeba castellanii str. Neff	14924340
ACA1_069520	CDS	ACA1_069520	NW_004457654.1	461108	462507	R	encoded by transcript ACA1_069520A; ubiquitin specific protease 54 family protein	complement(join(461108..461405,461764..461873,461946..462050,462121..462234,462310..462507))	Acanthamoeba castellanii str. Neff	14924341
ACA1_069540	CDS	ACA1_069540	NW_004457654.1	467340	468405	R	encoded by transcript ACA1_069540A; metal cation transporter, ZIP family protein	complement(join(467340..467657,467745..468157,468234..468405))	Acanthamoeba castellanii str. Neff	14924343
ACA1_069550	CDS	ACA1_069550	NW_004457654.1	468903	469496	R	encoded by transcript ACA1_069550A; polypeptide deformylase	complement(468903..469496)	Acanthamoeba castellanii str. Neff	14924344
ACA1_069560	CDS	ACA1_069560	NW_004457654.1	469732	470270	D	encoded by transcript ACA1_069560A; uncharacterized protein	join(469732..469839,469871..469975,470016..470120,470232..470270)	Acanthamoeba castellanii str. Neff	14924345
ACA1_069570	CDS	ACA1_069570	NW_004457654.1	471007	473917	D	encoded by transcript ACA1_069570A; Gprotein-coupled receptor	join(471007..471015,471101..471160,471473..471611,471688..471828,471913..472092,472167..472313,472402..472503,472591..472703,472797..472944,473026..473087,473236..473367,473453..473547,473606..473672,473745..473840,473870..473917)	Acanthamoeba castellanii str. Neff	14924346
ACA1_069580	CDS	ACA1_069580	NW_004457654.1	475012	479065	R	encoded by transcript ACA1_069580A; regulator of chromosome condensation (RCC1) repeat domain containing protein	complement(join(475012..475238,475349..475626,475732..475810,475880..476038,476155..476262,476333..476632,476696..476758,476850..476876,477002..477130,477221..477250,477354..477476,477557..477583,477669..477797,477867..478016,478198..478269,478410..478433,478600..478701,478957..479065))	Acanthamoeba castellanii str. Neff	14924347
ACA1_069590	CDS	ACA1_069590	NW_004457654.1	479205	481738	R	encoded by transcript ACA1_069590A; SET and MYND domain containing protein	complement(join(479205..479373,479459..479535,479639..479722,479851..479906,480001..480106,480171..480221,480293..480429,480536..480669,480776..480915,480977..481141,481234..481371,481430..481738))	Acanthamoeba castellanii str. Neff	14924348
ACA1_069600	CDS	ACA1_069600	NW_004457654.1	481918	482547	D	encoded by transcript ACA1_069600A; START domain containing protein	join(481918..482325,482341..482547)	Acanthamoeba castellanii str. Neff	14924349
ACA1_069610	CDS	ACA1_069610	NW_004457654.1	482707	483360	R	encoded by transcript ACA1_069610A; beta1 proteasome1D, putative	complement(482707..483360)	Acanthamoeba castellanii str. Neff	14924350
ACA1_069620	CDS	ACA1_069620	NW_004457654.1	483666	494713	D	encoded by transcript ACA1_069620A; Poly(ADPribose) polymerase, putative	join(483666..483794,483879..484056,484179..484301,484382..485172,485252..485374,485446..485605,485706..485774,485840..485925,486037..486125,486208..486566,486626..486696,486764..486877,487006..487134,487201..487338,487431..487539,487646..487755,487802..487994,488054..488118,488318..488677,488790..489135,489283..489635,489701..489777,489846..490382,490494..490902,491001..493236,493332..493426,493776..493937,494025..494230,494338..494509,494621..494713)	Acanthamoeba castellanii str. Neff	14924351
ACA1_069630	CDS	ACA1_069630	NW_004457654.1	495427	497207	D	encoded by transcript ACA1_069630A; serine/threonine kinase	join(495427..495534,495588..495689,495799..496042,496110..496474,496501..496921,497005..497207)	Acanthamoeba castellanii str. Neff	14924352
ACA1_069640	CDS	ACA1_069640	NW_004457654.1	497223	499064	R	encoded by transcript ACA1_069640A; thioesterase family domain containing protein	complement(join(497223..497491,497593..497644,497718..497903,497995..498054,498235..498390,498518..498628,498735..498896,498984..499064))	Acanthamoeba castellanii str. Neff	14924353
ACA1_069650	CDS	ACA1_069650	NW_004457654.1	499404	502200	R	encoded by transcript ACA1_069650A; glycine-tRNA ligase	complement(join(499404..499562,499672..500061,500154..500351,500442..500622,500722..500864,500921..501047,501122..501271,501381..501597,501724..501954,502074..502200))	Acanthamoeba castellanii str. Neff	14924354
ACA1_069660	CDS	ACA1_069660	NW_004457654.1	502866	504666	D	encoded by transcript ACA1_069660A; NADH:flavin oxidoreductase/NADH oxidase domain containing protein	join(502866..503059,503201..503540,503628..503837,503936..504129,504195..504340,504420..504513,504603..504666)	Acanthamoeba castellanii str. Neff	14924355
ACA1_069670	CDS	ACA1_069670	NW_004457654.1	505593	506267	D	encoded by transcript ACA1_069670A; uncharacterized protein	join(505593..505662,505912..506267)	Acanthamoeba castellanii str. Neff	14924356
ACA1_069680	CDS	ACA1_069680	NW_004457654.1	506531	507613	R	encoded by transcript ACA1_069680A; dienelactone hydrolase	complement(506531..507613)	Acanthamoeba castellanii str. Neff	14924357
ACA1_069690	CDS	ACA1_069690	NW_004457654.1	509175	524679	D	encoded by transcript ACA1_069690A; fattyacid synthase complex protein	join(509175..509235,509391..509518,509744..509925,510012..510143,510232..510779,510855..511174,511253..512017,512092..512305,512384..512710,512788..513024,513108..513250,513372..514287,514366..514430,514443..514681,514787..516178,516260..516437,516561..516845,516925..517185,517288..519023,519094..519237,519403..519592,519681..520015,520089..520389,520483..520587,520695..521092,521174..521327,521404..521802,521885..522286,522372..522547,522618..522918,522987..523973,524104..524679)	Acanthamoeba castellanii str. Neff	14924358
ACA1_069700	CDS	ACA1_069700	NW_004457654.1	524784	527858	D	encoded by transcript ACA1_069700A; DEAD/DEAH box helicase domain containing protein	join(524784..525056,525256..525440,525575..525687,525991..526169,526242..526353,526431..526620,526713..526797,526868..526955,527042..527073,527166..527236,527315..527393,527480..527587,527667..527858)	Acanthamoeba castellanii str. Neff	14924359
ACA1_069710	CDS	ACA1_069710	NW_004457654.1	528390	534952	D	encoded by transcript ACA1_069710A; serine/threonine kinase	join(528390..528464,528480..528623,528718..528852,528983..529291,529373..529686,529788..530116,530216..530451,530521..530664,530739..530892,530977..531124,531235..531434,531517..531776,531842..531958,532037..532133,532200..532464,532569..533252,533343..533620,533696..534154,534227..534432,534548..534952)	Acanthamoeba castellanii str. Neff	14924360
ACA1_069720	CDS	ACA1_069720	NW_004457654.1	535417	538455	D	encoded by transcript ACA1_069720A; pentatricopeptide repeat domain containing protein	join(535417..535487,535540..535613,535729..535850,536227..536305,536423..536568,536639..536724,536827..536891,536989..537232,537339..538455)	Acanthamoeba castellanii str. Neff	14924361
ACA1_069730	CDS	ACA1_069730	NW_004457654.1	538568	539716	D	encoded by transcript ACA1_069730A; Lysozyme, putative	join(538568..538676,538806..538907,538985..539046,539113..539219,539312..539440,539512..539716)	Acanthamoeba castellanii str. Neff	14924362
ACA1_069740	CDS	ACA1_069740	NW_004457654.1	539841	542505	R	encoded by transcript ACA1_069740A; betalactamase	complement(join(539841..540079,540152..540460,540555..540696,540780..540917,540998..541134,541293..541422,541490..541601,541673..541755,541836..541953,542025..542188,542266..542505))	Acanthamoeba castellanii str. Neff	14924363
ACA1_069750	CDS	ACA1_069750	NW_004457654.1	542841	545152	R	encoded by transcript ACA1_069750A; hyaluronidase	complement(join(542841..543137,543260..543456,543583..543674,543767..543833,543906..544004,544075..544177,544342..544679,544786..544885,544991..545152))	Acanthamoeba castellanii str. Neff	14924364
ACA1_069760	CDS	ACA1_069760	NW_004457654.1	545283	551351	R	encoded by transcript ACA1_069760A; von Willebrand factor type A domain containing protein	complement(join(545283..545496,545588..545817,545953..546220,546324..546468,546556..546648,546736..546900,547033..547367,547464..547566,547640..547834,547915..548014,548125..548260,548332..548415,548506..548932,549004..549337,549414..549528,549608..549725,549819..549908,549987..550182,550412..550641,550722..550972,551065..551351))	Acanthamoeba castellanii str. Neff	14924365
ACA1_069770	CDS	ACA1_069770	NW_004457654.1	551610	553932	D	encoded by transcript ACA1_069770A; tyrosine-tRNA ligase	join(551610..551856,551934..552181,552268..552522,552619..552945,553026..553152,553261..553510,553599..553740,553828..553932)	Acanthamoeba castellanii str. Neff	14924366
ACA1_069780	CDS	ACA1_069780	NW_004457654.1	554117	556110	D	encoded by transcript ACA1_069780A; uncharacterized protein	join(554117..554214,554434..554739,554817..554897,554976..555052,555155..555553,555640..555777,555893..556110)	Acanthamoeba castellanii str. Neff	14924367
ACA1_069790	CDS	ACA1_069790	NW_004457654.1	558144	558518	D	encoded by transcript ACA1_069790A; PPOD1 peroxidase	558144..558518	Acanthamoeba castellanii str. Neff	14924368
ACA1_069800	CDS	ACA1_069800	NW_004457654.1	559960	561562	D	encoded by transcript ACA1_069800A; diacylglycerol Oacyltransferase 2, putative	join(559960..560253,560434..560651,560748..560850,560992..561073,561088..561272,561386..561562)	Acanthamoeba castellanii str. Neff	14924369
ACA1_069810	CDS	ACA1_069810	NW_004457654.1	562003	567369	D	encoded by transcript ACA1_069810A; uncharacterized protein	join(562003..562410,562453..562719,562933..563020,563104..563211,563360..563446,563528..563602,563697..563817,563937..564006,564107..564560,564679..564902,565021..565098,565180..565330,565402..565477,565561..565820,565908..566035,566128..566202,566310..566396,566507..566567,566895..566977,567068..567179,567281..567369)	Acanthamoeba castellanii str. Neff	14924370
ACA1_069820	CDS	ACA1_069820	NW_004457654.1	567522	568109	R	encoded by transcript ACA1_069820A; chorismate mutase, putative	complement(567522..568109)	Acanthamoeba castellanii str. Neff	14924371
ACA1_069830	CDS	ACA1_069830	NW_004457654.1	568539	570915	R	encoded by transcript ACA1_069830A; Choline/Carnitine oacyltransferase superfamily protein	complement(join(568539..568768,568845..568968,569043..569410,569502..570915))	Acanthamoeba castellanii str. Neff	14924372
ACA1_069840	CDS	ACA1_069840	NW_004457654.1	572044	573299	D	encoded by transcript ACA1_069840A; pseudouridine synthase, RluD, putative	join(572044..572132,572299..572441,572553..572680,572796..572912,573006..573299)	Acanthamoeba castellanii str. Neff	14924373
ACA1_069850	CDS	ACA1_069850	NW_004457654.1	573589	575204	D	encoded by transcript ACA1_069850A; uncharacterized protein	join(573589..573607,573811..573926,574114..574240,574341..574429,574546..574764,574856..574990,575076..575204)	Acanthamoeba castellanii str. Neff	14924374
ACA1_069860	CDS	ACA1_069860	NW_004457654.1	575408	578712	R	encoded by transcript ACA1_069860A; lipase	complement(join(575408..575627,575779..575929,576023..576266,576370..576518,576610..576724,576911..577072,577169..577812,577916..578239,578340..578712))	Acanthamoeba castellanii str. Neff	14924375
ACA1_069870	CDS	ACA1_069870	NW_004457654.1	579236	584427	R	encoded by transcript ACA1_069870A; PGAP1 family protein	complement(join(579236..579323,579384..579443,579528..579742,579858..580025,580369..580559,580651..580783,580849..580919,580995..581154,581248..581298,581468..581511,581551..581688,581820..581943,582047..582128,582199..582311,582373..582537,582680..582799,582888..582946,583088..583161,583263..583396,583472..583591,583768..583980,584248..584285,584382..584427))	Acanthamoeba castellanii str. Neff	14924376
ACA1_069880	CDS	ACA1_069880	NW_004457654.1	584723	586070	R	encoded by transcript ACA1_069880A; uncharacterized protein	complement(join(584723..584928,585028..585540,585611..585721,585827..585889,585971..586070))	Acanthamoeba castellanii str. Neff	14924377
ACA1_069890	CDS	ACA1_069890	NW_004457654.1	586435	594674	R	encoded by transcript ACA1_069890A; Ankyrin repeat and SPRY domain containing protein	complement(join(586435..586677,586788..586900,587022..587101,587217..587294,587503..587678,587762..587914,588015..588220,588315..588413,588555..588659,588764..588862,588970..589065,589146..589277,589397..589555,589700..589765,589840..589908,590021..590080,590144..590212,590339..590457,590595..590681,590785..590875,590950..591054,591197..591265,591366..591464,591567..591665,591744..591882,592014..592162,592259..592499,592576..592754,592900..592977,593066..593150,593264..593360,593494..593579,593651..593949,594039..594143,594209..594266,594375..594494,594570..>594674))	Acanthamoeba castellanii str. Neff	14924378
ACA1_069900	CDS	ACA1_069900	NW_004457654.1	595250	596489	D	encoded by transcript ACA1_069900A; SCPlike extracellular subfamily protein	join(595250..595451,595563..595736,595815..595958,596092..596489)	Acanthamoeba castellanii str. Neff	14924379
ACA1_069910	CDS	ACA1_069910	NW_004457654.1	596706	598336	D	encoded by transcript ACA1_069910A; citrin, putative	join(596706..596790,597000..597202,597323..597491,597603..597700,597783..597875,597982..598191,598259..598336)	Acanthamoeba castellanii str. Neff	14924380
ACA1_069920	CDS	ACA1_069920	NW_004457654.1	598463	605211	R	encoded by transcript ACA1_069920A; ATPase, aminophospholipid transporter, putative	complement(join(598463..598545,598635..598741,598836..598927,599056..599153,599307..599401,599501..599668,599819..599959,600113..600228,600376..600483,600547..600765,600854..601138,601223..601471,601561..601659,601764..601847,601939..602073,602311..602403,602596..602760,602857..603181,603316..603398,603473..603582,603657..603736,603859..603977,604069..604173,604315..604413,604578..604618,604706..604907,605035..605211))	Acanthamoeba castellanii str. Neff	14924381
ACA1_069930	CDS	ACA1_069930	NW_004457654.1	605499	607654	R	encoded by transcript ACA1_069930A; glycosyl transferase	complement(join(605499..606029,606123..606281,606366..606811,606965..607067,607625..607654))	Acanthamoeba castellanii str. Neff	14924382
ACA1_069940	CDS	ACA1_069940	NW_004457654.1	607684	609160	D	encoded by transcript ACA1_069940A; uncharacterized protein	join(607684..607739,608019..608086,608182..608295,608456..608497,608617..608690,608824..608895,609032..609160)	Acanthamoeba castellanii str. Neff	14924383
ACA1_069950	CDS	ACA1_069950	NW_004457654.1	609313	609836	R	encoded by transcript ACA1_069950A; uncharacterized protein	complement(join(609313..609402,609529..609635,609731..609836))	Acanthamoeba castellanii str. Neff	14924384
ACA1_069960	CDS	ACA1_069960	NW_004457654.1	610120	611532	R	encoded by transcript ACA1_069960A; C16orf68, putative	complement(join(610120..610241,610343..610500,610610..610685,610789..611058,611152..611302,611375..611471,611486..611532))	Acanthamoeba castellanii str. Neff	14924385
ACA1_069970	CDS	ACA1_069970	NW_004457654.1	611783	612388	D	encoded by transcript ACA1_069970A; OHCU decarboxylase	611783..612388	Acanthamoeba castellanii str. Neff	14924386
ACA1_069980	CDS	ACA1_069980	NW_004457654.1	613783	615101	D	encoded by transcript ACA1_069980A; glycosyl transferase, group 1 family protein	join(613783..614199,614284..614442,614538..615101)	Acanthamoeba castellanii str. Neff	14924387
ACA1_070000	CDS	ACA1_070000	NW_004457654.1	617141	618021	D	encoded by transcript ACA1_070000A; uncharacterized protein	join(617141..617196,617294..617418,617516..617703,617848..618021)	Acanthamoeba castellanii str. Neff	14924389
ACA1_070010	CDS	ACA1_070010	NW_004457654.1	618122	623829	R	encoded by transcript ACA1_070010A; C2 domain containing protein	complement(join(618122..618276,618379..618488,618579..618714,618794..618934,619149..619264,619396..619511,619620..619742,619876..619971,620100..620186,620340..620426,620553..620681,620782..620970,621228..621293,621510..621635,621761..622054,622176..622319,622402..622470,622582..622697,622814..623063,623118..623523,623738..623829))	Acanthamoeba castellanii str. Neff	14924390
ACA1_070020	CDS	ACA1_070020	NW_004457654.1	624052	625591	D	encoded by transcript ACA1_070020A; uncharacterized protein	join(624052..624154,624335..624727,624903..625064,625170..625296,625363..625591)	Acanthamoeba castellanii str. Neff	14924391
ACA1_070030	CDS	ACA1_070030	NW_004457654.1	625698	627282	R	encoded by transcript ACA1_070030A; UDPglucuronate decarboxylase, putative	complement(join(625698..625841,625916..626013,626183..626287,626408..626825,627022..627282))	Acanthamoeba castellanii str. Neff	14924392
ACA1_070040	CDS	ACA1_070040	NW_004457654.1	627485	629780	D	encoded by transcript ACA1_070040A; uncharacterized protein	join(627485..627532,627621..627759,627862..627944,628015..628269,628342..628705,628807..629780)	Acanthamoeba castellanii str. Neff	14924393
ACA1_070050	CDS	ACA1_070050	NW_004457654.1	630223	630675	R	encoded by transcript ACA1_070050A; ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3), putative	complement(630223..630675)	Acanthamoeba castellanii str. Neff	14924394
ACA1_070160	CDS	ACA1_070160	NW_004457654.1	630995	633673	D	encoded by transcript ACA1_070160A; tetratricopeptide repeat-containing protein	join(630995..631427,631623..632578,632672..633673)	Acanthamoeba castellanii str. Neff	14924395
ACA1_070170	CDS	ACA1_070170	NW_004457654.1	634523	635226	D	encoded by transcript ACA1_070170A; tetratricopeptide repeat domain containing protein	join(634523..634541,634660..634734,634777..634947,635090..635226)	Acanthamoeba castellanii str. Neff	14924396
ACA1_070180	CDS	ACA1_070180	NW_004457654.1	635305	635731	D	encoded by transcript ACA1_070180A; uncharacterized protein	join(635305..635482,635568..635731)	Acanthamoeba castellanii str. Neff	14924397
ACA1_070190	CDS	ACA1_070190	NW_004457654.1	635961	636326	R	encoded by transcript ACA1_070190A; polyprotein	complement(635961..636326)	Acanthamoeba castellanii str. Neff	14924398
ACA1_070200	CDS	ACA1_070200	NW_004457654.1	636392	639276	R	encoded by transcript ACA1_070200A; reverse transcriptase	complement(join(636392..637249,637588..639276))	Acanthamoeba castellanii str. Neff	14924399
ACA1_070310	CDS	ACA1_070310	NW_004457654.1	640128	640361	D	encoded by transcript ACA1_070310A; uncharacterized protein	640128..640361	Acanthamoeba castellanii str. Neff	14924400
ACA1_070330	CDS	ACA1_070330	NW_004457654.1	641756	644706	D	encoded by transcript ACA1_070330A; uncharacterized protein	join(641756..641891,641985..642071,642151..642225,642320..642394,642513..642581,642948..643007,643102..643182,643261..643347,643424..643621,643703..643831,643935..644013,644095..644357,644486..644706)	Acanthamoeba castellanii str. Neff	14924402
ACA1_070350	CDS	ACA1_070350	NW_004457654.1	648982	650471	R	encoded by transcript ACA1_070350A; oxidoreductase, zincbinding dehydrogenase, putative	complement(join(648982..649556,649680..649823,649979..650208,650311..650471))	Acanthamoeba castellanii str. Neff	14924404
ACA1_070360	CDS	ACA1_070360	NW_004457654.1	650751	651977	R	encoded by transcript ACA1_070360A; glyoxalase, putative	complement(650751..651977)	Acanthamoeba castellanii str. Neff	14924405
ACA1_070370	CDS	ACA1_070370	NW_004457654.1	652300	655114	D	encoded by transcript ACA1_070370A; SH2 domain containing protein	join(652300..652367,652510..653446,653545..653673,653746..653923,654006..654320,654402..654589,654725..654949,655037..655114)	Acanthamoeba castellanii str. Neff	14924406
ACA1_070380	CDS	ACA1_070380	NW_004457654.1	655649	662077	D	encoded by transcript ACA1_070380A; RhoGEF domain containing protein	join(655649..655750,655852..656211,656313..656580,656748..656821,657030..657293,657427..657621,657689..657822,657882..658516,658610..659082,659152..659339,659418..659592,659683..660297,660383..660541,660607..660691,660754..660803,660981..661165,661235..661418,661557..661811,661907..662077)	Acanthamoeba castellanii str. Neff	14924407
ACA1_070390	CDS	ACA1_070390	NW_004457654.1	663122	665128	D	encoded by transcript ACA1_070390A; Fanconi anemia, complementation group L family protein	join(663122..663163,663404..663532,663647..663703,663834..664003,664093..664367,664545..664674,664753..664939,665015..665128)	Acanthamoeba castellanii str. Neff	14924408
ACA1_070400	CDS	ACA1_070400	NW_004457654.1	665349	667065	R	encoded by transcript ACA1_070400A; ankyrin repeat-containing protein	complement(join(665349..666519,666635..666761,666867..667065))	Acanthamoeba castellanii str. Neff	14924409
ACA1_070410	CDS	ACA1_070410	NW_004457654.1	667791	669858	R	encoded by transcript ACA1_070410A; uncharacterized protein	complement(join(667791..667994,668107..668158,668231..668373,668459..668541,668629..668728,668829..669033,669113..669228,669364..669414,669499..669575,669738..669858))	Acanthamoeba castellanii str. Neff	14924410
ACA1_070420	CDS	ACA1_070420	NW_004457654.1	670250	671950	D	encoded by transcript ACA1_070420A; helicase associated domain containing protein	join(670250..670448,670584..671134,671237..671728,671816..671950)	Acanthamoeba castellanii str. Neff	14924411
ACA1_070430	CDS	ACA1_070430	NW_004457654.1	672157	673341	D	encoded by transcript ACA1_070430A; uncharacterized protein	672157..673341	Acanthamoeba castellanii str. Neff	14924412
ACA1_070440	CDS	ACA1_070440	NW_004457654.1	673652	686369	R	encoded by transcript ACA1_070440A; uncharacterized protein	complement(join(673652..673849,673954..674168,674272..674356,674465..674555,674755..674875,674980..675043,675170..675448,675552..675817,675927..675973,676151..676442,676554..676601,676671..676810,676929..677446,677529..677761,677868..678395,678474..678866,678949..679039,679052..679117,679267..679365,679463..679581,679671..679940,680059..680222,680349..680601,680681..680894,680958..680998,681085..681346,681507..681770,681874..681947,682063..682215,682297..682500,682632..682777,682904..683258,683342..683471,683563..683678,683748..683959,684062..684279,684388..684473,684561..684670,684775..684931,685076..685225,685328..685444,685646..685744,685820..685915,686032..686076,686264..686369))	Acanthamoeba castellanii str. Neff	14924413
ACA1_070450	CDS	ACA1_070450	NW_004457654.1	686620	687324	D	encoded by transcript ACA1_070450A; uncharacterized protein	join(686620..686710,686846..687324)	Acanthamoeba castellanii str. Neff	14924414
ACA1_070460	CDS	ACA1_070460	NW_004457654.1	687592	689754	R	encoded by transcript ACA1_070460A; chaperone protein DnaJ, putative	complement(join(687592..687656,687717..687875,687945..688128,688256..688366,688475..688770,688850..689414,689542..689754))	Acanthamoeba castellanii str. Neff	14924415
ACA1_070470	CDS	ACA1_070470	NW_004457654.1	690307	692840	D	encoded by transcript ACA1_070470A; NADbinding domain 4 domain containing protein	join(690307..690612,690753..690824,690939..690992,691106..691184,691353..691455,691586..691833,691921..692094,692220..692611,692745..692840)	Acanthamoeba castellanii str. Neff	14924416
ACA1_070480	CDS	ACA1_070480	NW_004457654.1	692999	694982	R	encoded by transcript ACA1_070480A; RanBP1 domain containing protein	complement(join(692999..693127,693256..693347,693439..693547,693610..693653,693766..693802,693956..694436,694567..694595,694726..694874,694979..694982))	Acanthamoeba castellanii str. Neff	14924417
ACA1_070490	CDS	ACA1_070490	NW_004457654.1	695243	701631	D	encoded by transcript ACA1_070490A; phospholipase D, putative	join(695243..695421,695532..695637,695740..695904,696046..696287,696366..696594,696727..696901,697001..697193,697280..697378,697461..697522,697605..697758,697853..698063,698148..698294,698392..698790,698883..699146,699209..699368,699482..699929,699977..700130,700251..700395,700522..700724,700829..701074,701179..701359,701480..701631)	Acanthamoeba castellanii str. Neff	14924418
ACA1_070500	CDS	ACA1_070500	NW_004457654.1	701934	703400	R	encoded by transcript ACA1_070500A; Ras subfamily protein	complement(join(701934..702136,702218..702339,702503..702546,702681..702737,702889..702904,703026..703129,703222..703249,703339..703400))	Acanthamoeba castellanii str. Neff	14924419
ACA1_070510	CDS	ACA1_070510	NW_004457654.1	704818	705276	R	encoded by transcript ACA1_070510A; uncharacterized protein	complement(join(704818..705009,705181..705276))	Acanthamoeba castellanii str. Neff	14924420
ACA1_070520	CDS	ACA1_070520	NW_004457654.1	707011	707541	D	encoded by transcript ACA1_070520A; uncharacterized protein	join(707011..707130,707153..707486,707531..707541)	Acanthamoeba castellanii str. Neff	14924421
ACA1_070530	CDS	ACA1_070530	NW_004457654.1	712123	715883	D	encoded by transcript ACA1_070530A; GRAM domain containing protein	join(712123..712336,712529..712659,712760..712846,712967..713082,713239..714465,714561..714813,714949..715047,715166..715323,715479..715592,715736..715883)	Acanthamoeba castellanii str. Neff	14924422
ACA1_070540	CDS	ACA1_070540	NW_004457654.1	715980	720230	D	encoded by transcript ACA1_070540A; TBC domain containing protein	join(715980..716084,716271..716400,716522..716629,716742..716797,716946..717047,717190..717279,717418..717594,717684..717753,717905..718011,718104..718207,718333..718418,718558..718679,718790..718904,719019..719561,719644..719726,719829..720230)	Acanthamoeba castellanii str. Neff	14924423
ACA1_070550	CDS	ACA1_070550	NW_004457654.1	720646	728434	R	encoded by transcript ACA1_070550A; nucleoporin, putative	complement(join(720646..720747,720892..720984,721077..721260,721353..721422,721543..721647,721735..721855,721996..722072,722192..722264,722443..722577,722693..722956,723063..723398,723500..723577,723644..723724,723829..723945,724066..724203,724318..724451,724557..724679,724752..724886,724996..725093,725193..725266,725359..725433,725525..725658,725732..725889,726009..726100,726193..726361,726448..726530,726600..726710,726816..726932,727029..727113,727191..727270,727355..727467,727556..727669,727752..727822,727890..727940,727998..728043,728119..728434))	Acanthamoeba castellanii str. Neff	14924424
ACA1_070560	CDS	ACA1_070560	NW_004457654.1	728621	735680	D	encoded by transcript ACA1_070560A; zinc finger domain containing protein	join(728621..730529,730635..730935,731061..731100,731246..731402,731697..731791,731902..732001,732150..732292,732481..732535,732689..732760,732870..733210,733339..733563,733749..733995,734112..734299,734419..734559,734632..734781,734876..735011,735113..735290,735377..735513,735610..735680)	Acanthamoeba castellanii str. Neff	14924425
ACA1_070570	CDS	ACA1_070570	NW_004457654.1	736012	737038	R	encoded by transcript ACA1_070570A; Sar1family small GTPase	complement(join(736012..736040,736148..736229,736329..736457,736560..736729,736796..736915,736996..737038))	Acanthamoeba castellanii str. Neff	14924426
ACA1_070580	CDS	ACA1_070580	NW_004457654.1	737335	739052	D	encoded by transcript ACA1_070580A; Vps23 domain containing protein	join(737335..737367,737482..737530,737660..737812,738098..738402,738567..738697,738796..738924,738989..739052)	Acanthamoeba castellanii str. Neff	14924427
ACA1_070590	CDS	ACA1_070590	NW_004457654.1	739340	740914	R	encoded by transcript ACA1_070590A; uncharacterized protein	complement(join(739340..739403,739480..739727,739957..740302,740468..740509,740640..740914))	Acanthamoeba castellanii str. Neff	14924428
ACA1_070610	CDS	ACA1_070610	NW_004457654.1	747503	748704	D	encoded by transcript ACA1_070610A; Myotubularin, putative	join(747503..747751,747868..748018,748121..748308,748506..748610,748639..748704)	Acanthamoeba castellanii str. Neff	14924430
ACA1_070620	CDS	ACA1_070620	NW_004457654.1	748748	750567	D	encoded by transcript ACA1_070620A; Myotubularinrelated protein	join(748748..749045,749134..749215,749355..749379,749469..749518,749629..749729,749798..749847,749974..750315,750436..750567)	Acanthamoeba castellanii str. Neff	14924431
ACA1_070630	CDS	ACA1_070630	NW_004457654.1	750754	751471	R	encoded by transcript ACA1_070630A; Rasrelated protein ORAB-1, putative	complement(join(750754..751196,751282..751471))	Acanthamoeba castellanii str. Neff	14924432
ACA1_070640	CDS	ACA1_070640	NW_004457654.1	751765	753610	D	encoded by transcript ACA1_070640A; RNA recognition motif domain containing protein	join(751765..752168,752234..752366,752442..752528,752691..752746,752890..753036,753232..753306,753466..753610)	Acanthamoeba castellanii str. Neff	14924433
ACA1_070650	CDS	ACA1_070650	NW_004457654.1	754168	756642	D	encoded by transcript ACA1_070650A; uncharacterized protein	join(754168..755841,755965..756089,756158..756286,756503..756596,756616..756642)	Acanthamoeba castellanii str. Neff	14924434
ACA1_070660	CDS	ACA1_070660	NW_004457654.1	756791	757567	D	encoded by transcript ACA1_070660A; uncharacterized protein	join(756791..756957,757027..757174,757388..757567)	Acanthamoeba castellanii str. Neff	14924435
ACA1_070770	CDS	ACA1_070770	NW_004457654.1	758281	758640	R	encoded by transcript ACA1_070770A; uncharacterized protein	complement(758281..758640)	Acanthamoeba castellanii str. Neff	14924436
ACA1_070780	CDS	ACA1_070780	NW_004457654.1	758594	759811	D	encoded by transcript ACA1_070780A; Nacetyltransferase	join(758594..758677,758750..758953,759113..759286,759401..759547,759632..759811)	Acanthamoeba castellanii str. Neff	14924438
ACA1_070790	CDS	ACA1_070790	NW_004457654.1	759999	762098	R	encoded by transcript ACA1_070790A; uncharacterized protein	complement(join(759999..760103,760291..760592,760748..762098))	Acanthamoeba castellanii str. Neff	14924437
ACA1_070800	CDS	ACA1_070800	NW_004457654.1	762239	764014	D	encoded by transcript ACA1_070800A; Transmembrane protein 33 family protein, putative	join(762239..762448,762568..762930,763047..763149,763276..763357,763586..763705,763840..764014)	Acanthamoeba castellanii str. Neff	14924439
ACA1_070810	CDS	ACA1_070810	NW_004457654.1	764315	768514	D	encoded by transcript ACA1_070810A; uncharacterized protein	join(764315..764512,764567..764973,765596..766880,767009..767356,767527..767745,767907..768006,768133..768315,768399..768514)	Acanthamoeba castellanii str. Neff	14924440
ACA1_070820	CDS	ACA1_070820	NW_004457654.1	768734	770546	D	encoded by transcript ACA1_070820A; uncharacterized protein	join(768734..768738,768811..768921,769022..769068,769178..769327,769473..769554,769637..769723,769889..770546)	Acanthamoeba castellanii str. Neff	14924441
ACA1_070830	CDS	ACA1_070830	NW_004457654.1	770754	780348	R	encoded by transcript ACA1_070830A; acetylCoA carboxylase	complement(join(770754..772763,772797..773522,773631..774446,774563..774694,774756..774806,775084..775338,775482..775691,775877..775981,776107..776191,776366..776547,776653..776823,776961..777095,777217..777396,777505..777618,777810..777977,778152..778253,778457..778642,778734..778922,779062..779223,779359..779560,779831..780348))	Acanthamoeba castellanii str. Neff	14924442
ACA1_070860	CDS	ACA1_070860	NW_004457654.1	790650	791497	D	encoded by transcript ACA1_070860A; uncharacterized protein	join(790650..790800,790950..791027,791157..791497)	Acanthamoeba castellanii str. Neff	14924445
ACA1_070870	CDS	ACA1_070870	NW_004457654.1	793959	794421	R	encoded by transcript ACA1_070870A; uncharacterized protein	complement(join(793959..794087,794153..794325,794391..794421))	Acanthamoeba castellanii str. Neff	14924446
ACA1_070880	CDS	ACA1_070880	NW_004457654.1	795369	795660	R	encoded by transcript ACA1_070880A; uncharacterized protein	complement(join(795369..795393,795464..795660))	Acanthamoeba castellanii str. Neff	14924447
ACA1_070890	CDS	ACA1_070890	NW_004457654.1	795962	796842	R	encoded by transcript ACA1_070890A; uncharacterized protein	complement(join(795962..796122,796238..796399,796460..796577,796804..796842))	Acanthamoeba castellanii str. Neff	14924448
ACA1_070900	CDS	ACA1_070900	NW_004457654.1	797086	798485	D	encoded by transcript ACA1_070900A; uncharacterized protein	join(797086..797146,797201..797251,797325..797496,797641..797775,797924..798485)	Acanthamoeba castellanii str. Neff	14924449
ACA1_070910	CDS	ACA1_070910	NW_004457654.1	798638	800361	R	encoded by transcript ACA1_070910A; HD domain containing protein	complement(join(798638..798795,799043..799130,799276..799350,799437..799580,799838..799920,800031..800088,800260..800361))	Acanthamoeba castellanii str. Neff	14924450
ACA1_070920	CDS	ACA1_070920	NW_004457654.1	800487	803552	D	encoded by transcript ACA1_070920A; tRNA(N1G37) methyltransferase, putative	join(800487..800685,800724..800761,800852..800970,801062..801189,801390..801526,801673..801783,801869..801980,802108..802235,802452..802581,802744..802832,803000..803104,803361..803552)	Acanthamoeba castellanii str. Neff	14924451
ACA1_070930	CDS	ACA1_070930	NW_004457654.1	803745	804887	D	encoded by transcript ACA1_070930A; uncharacterized protein	803745..804887	Acanthamoeba castellanii str. Neff	14924452
ACA1_070940	CDS	ACA1_070940	NW_004457654.1	805227	808255	R	encoded by transcript ACA1_070940A; uncharacterized protein	complement(join(805227..805361,805465..805580,805766..805881,806024..806625,806807..807066,807214..808255))	Acanthamoeba castellanii str. Neff	14924453
ACA1_070950	CDS	ACA1_070950	NW_004457654.1	808432	811103	R	encoded by transcript ACA1_070950A; Armadillo/betacatenin-like repeat domain containing protein	complement(join(808432..808446,808550..808666,808758..808820,808958..809059,809186..809327,809477..809557,809697..809770,809977..810312,810473..810616,810753..811103))	Acanthamoeba castellanii str. Neff	14924454
ACA1_070960	CDS	ACA1_070960	NW_004457654.1	811401	816610	D	encoded by transcript ACA1_070960A; calciumtranslocating P-type ATPase, PMCA-type, putative	join(811401..811880,811964..812020,812107..812199,812260..812382,812544..812681,812772..812901,813000..813130,813266..813382,813661..813768,813888..814118,814244..814359,814476..814609,814802..814907,814993..815079,815224..815344,815505..815937,816076..816184,816285..816397,816531..816610)	Acanthamoeba castellanii str. Neff	14924455
ACA1_070970	CDS	ACA1_070970	NW_004457654.1	816881	820778	R	encoded by transcript ACA1_070970A; BTB/POZ domain containing protein	complement(join(816881..817060,817089..817343,817457..817525,817610..817708,817818..817917,818036..818248,818379..818439,818555..818661,818791..818922,819175..819266,819398..819464,819900..820037,820287..820374,820479..820593,820689..820778))	Acanthamoeba castellanii str. Neff	14924456
ACA1_070980	CDS	ACA1_070980	NW_004457654.1	820919	822270	R	encoded by transcript ACA1_070980A; uncharacterized protein	complement(join(820919..820939,821056..821233,821348..821417,821543..821585,821648..821732,821834..822270))	Acanthamoeba castellanii str. Neff	14924457
ACA1_070990	CDS	ACA1_070990	NW_004457654.1	822621	824016	D	encoded by transcript ACA1_070990A; uncharacterized protein	join(822621..822851,822954..823256,823365..823471,823666..823783,823924..824016)	Acanthamoeba castellanii str. Neff	14924458
ACA1_071000	CDS	ACA1_071000	NW_004457654.1	824177	827227	R	encoded by transcript ACA1_071000A; uncharacterized protein	complement(join(824177..824444,824536..824674,824820..824913,825037..825104,825210..825804,825915..825993,826111..826189,826300..827227))	Acanthamoeba castellanii str. Neff	14924459
ACA1_071010	CDS	ACA1_071010	NW_004457654.1	830887	834545	R	encoded by transcript ACA1_071010A; leucine rich repeat domain containing protein	complement(join(830887..831103,831219..831713,831773..832616,832698..832838,832928..833093,833200..833333,833415..833526,833651..833773,834103..834269,834326..>834545))	Acanthamoeba castellanii str. Neff	14924460
ACA1_071020	CDS	ACA1_071020	NW_004457654.1	836145	836547	D	encoded by transcript ACA1_071020A; uncharacterized protein	join(836145..836153,836165..836492,836537..836547)	Acanthamoeba castellanii str. Neff	14924461
ACA1_071030	CDS	ACA1_071030	NW_004457654.1	838415	839702	R	encoded by transcript ACA1_071030A; CCAATbinding transcription factor (CBF-B/NF-YA) subunit B domain containing protein	complement(join(838415..838712,838823..838911,839045..839221,839403..839702))	Acanthamoeba castellanii str. Neff	14924462
ACA1_071040	CDS	ACA1_071040	NW_004457654.1	841016	841565	D	encoded by transcript ACA1_071040A; protein kinase domain containing protein	join(841016..841073,841127..841220,841291..841325,841408..841565)	Acanthamoeba castellanii str. Neff	14924463
ACA1_071050	CDS	ACA1_071050	NW_004457654.1	841777	853428	D	encoded by transcript ACA1_071050A; leucinerich repeat kinase	join(841777..841809,841943..842091,842211..842393,842511..842740,843068..843594,843695..843835,843932..844049,844169..844263,844378..844475,844550..844652,844732..845397,845478..845550,845636..845784,845896..847626,847727..847866,847931..848022,848119..848275,848404..848516,848675..848797,848926..849031,849111..849204,849294..849500,849620..849775,849889..850237,850365..850485,850570..850670,850784..850910,851039..851332,851413..851481,851605..851960,852061..852236,852337..853428)	Acanthamoeba castellanii str. Neff	14924464
ACA1_071060	CDS	ACA1_071060	NW_004457654.1	854104	855302	D	encoded by transcript ACA1_071060A; uncharacterized protein	join(854104..854774,854882..855050,855153..855302)	Acanthamoeba castellanii str. Neff	14924465
ACA1_071070	CDS	ACA1_071070	NW_004457654.1	855615	855914	D	encoded by transcript ACA1_071070A; cruciform DNA binding protein, putative	855615..855914	Acanthamoeba castellanii str. Neff	14924466
ACA1_071080	CDS	ACA1_071080	NW_004457654.1	856049	857149	R	encoded by transcript ACA1_071080A; uncharacterized protein	complement(join(856049..856096,856201..856282,856364..856430,856519..856606,856677..856737,856821..>857149))	Acanthamoeba castellanii str. Neff	14924467
ACA1_071090	CDS	ACA1_071090	NW_004457654.1	857767	859715	R	encoded by transcript ACA1_071090A; ABC transporter, putative	complement(join(857767..858444,858475..858779,858854..859183,859277..859522,859589..859715))	Acanthamoeba castellanii str. Neff	14924468
ACA1_071100	CDS	ACA1_071100	NW_004457654.1	860090	861345	D	encoded by transcript ACA1_071100A; small rabrelated GTPase	join(860090..860139,860219..860298,860376..860433,860596..860689,860790..860927,861045..861138,861248..861345)	Acanthamoeba castellanii str. Neff	14924469
ACA1_071110	CDS	ACA1_071110	NW_004457654.1	861543	863907	R	encoded by transcript ACA1_071110A; uncharacterized protein	complement(join(861543..862178,862249..863907))	Acanthamoeba castellanii str. Neff	14924470
ACA1_071120	CDS	ACA1_071120	NW_004457654.1	865581	867087	D	encoded by transcript ACA1_071120A; low CO2induced aldose reductase	join(865581..865645,865760..866087,866211..866363,866517..866690,866830..867087)	Acanthamoeba castellanii str. Neff	14924471
ACA1_071130	CDS	ACA1_071130	NW_004457654.1	867169	868422	R	encoded by transcript ACA1_071130A; uncharacterized protein	complement(join(867169..867473,867585..867717,867866..867985,868067..868222,868303..868422))	Acanthamoeba castellanii str. Neff	14924472
ACA1_071140	CDS	ACA1_071140	NW_004457654.1	868930	869360	R	encoded by transcript ACA1_071140A; selenophosphate synthetase	complement(join(868930..869108,869234..869360))	Acanthamoeba castellanii str. Neff	14924473
ACA1_071150	CDS	ACA1_071150	NW_004457654.1	870645	875297	D	encoded by transcript ACA1_071150A; Fbox domain containing protein	join(870645..870878,871001..871574,871681..871838,872011..872119,872185..872561,872658..873031,873113..873285,873390..873482,873587..873702,874142..874211,874371..874429,874581..874723,874798..874930,875067..875297)	Acanthamoeba castellanii str. Neff	14924474
ACA1_071160	CDS	ACA1_071160	NW_004457654.1	875479	877373	D	encoded by transcript ACA1_071160A; LETM1 family protein	join(875479..875626,875737..875912,876020..876206,876344..876423,876563..876700,876841..877002,877104..877373)	Acanthamoeba castellanii str. Neff	14924475
ACA1_071170	CDS	ACA1_071170	NW_004457654.1	878808	883874	D	encoded by transcript ACA1_071170A; RhoGAP domain containing protein	join(878808..878925,879010..879108,879222..879314,879415..879527,879601..879775,879863..879942,880085..880211,880319..881354,881523..881893,881973..882058,882265..883430,883520..883874)	Acanthamoeba castellanii str. Neff	14924476
ACA1_071180	CDS	ACA1_071180	NW_004457654.1	884045	886175	R	encoded by transcript ACA1_071180A; uncharacterized protein	complement(join(884045..884283,884316..884600,884728..884784,884891..885454,885645..885787,885931..886175))	Acanthamoeba castellanii str. Neff	14924477
ACA1_071190	CDS	ACA1_071190	NW_004457654.1	886568	887538	D	encoded by transcript ACA1_071190A; DNA ligase III, putative	join(886568..886799,886898..887538)	Acanthamoeba castellanii str. Neff	14924478
ACA1_071200	CDS	ACA1_071200	NW_004457654.1	887761	889349	D	encoded by transcript ACA1_071200A; uncharacterized protein	join(887761..887802,887865..887955,888040..888130,888218..888487,888584..888779,888856..888945,889014..889349)	Acanthamoeba castellanii str. Neff	14924479
ACA1_071210	CDS	ACA1_071210	NW_004457654.1	889559	890388	R	encoded by transcript ACA1_071210A; AAC-rich mRNA clone AAC4 protein	complement(join(889559..889848,889924..890152,890275..890388))	Acanthamoeba castellanii str. Neff	14924480
ACA1_071220	CDS	ACA1_071220	NW_004457654.1	891811	892607	R	encoded by transcript ACA1_071220A; uncharacterized protein	complement(join(891811..892145,892220..892328,892408..892455,892536..892607))	Acanthamoeba castellanii str. Neff	14924481
ACA1_071230	CDS	ACA1_071230	NW_004457654.1	892785	895002	D	encoded by transcript ACA1_071230A; tRNA dimethylallyltransferase	join(892785..892961,893110..893227,893363..893658,893780..893844,893974..894152,894250..894397,894477..895002)	Acanthamoeba castellanii str. Neff	14924482
ACA1_071240	CDS	ACA1_071240	NW_004457654.1	895067	898225	R	encoded by transcript ACA1_071240A; transporter, major facilitator subfamily protein	complement(join(895067..895163,895270..895405,895484..895528,895630..895763,895895..895983,896130..896222,896392..896488,896661..896781,897051..897207,897428..897520,897650..897778,898157..898225))	Acanthamoeba castellanii str. Neff	14924483
ACA1_071250	CDS	ACA1_071250	NW_004457654.1	898420	905072	R	encoded by transcript ACA1_071250A; DEAD box RNA helicase, putative	complement(join(898420..898573,898648..905072))	Acanthamoeba castellanii str. Neff	14924484
ACA1_071260	CDS	ACA1_071260	NW_004457654.1	905565	906290	R	encoded by transcript ACA1_071260A; uncharacterized protein	complement(join(905565..905615,905774..906037,906114..906290))	Acanthamoeba castellanii str. Neff	14924485
ACA1_071270	CDS	ACA1_071270	NW_004457654.1	906855	911770	R	encoded by transcript ACA1_071270A; ARM family protein	complement(join(906855..906986,907066..907263,907360..907487,907569..907788,907867..908048,908150..908656,908748..909283,909782..909946,910135..910288,910358..910436,910513..910830,910918..910977,911092..911535,911615..911770))	Acanthamoeba castellanii str. Neff	14924486
ACA1_071280	CDS	ACA1_071280	NW_004457654.1	912135	914537	R	encoded by transcript ACA1_071280A; adaptor complexes medium subunit family protein	complement(join(912135..912163,912230..912371,912452..912659,912758..912867,912950..913186,913275..913412,913595..913669,913751..913823,913926..914372,914467..914537))	Acanthamoeba castellanii str. Neff	14924487
ACA1_071290	CDS	ACA1_071290	NW_004457654.1	914820	918220	D	encoded by transcript ACA1_071290A; dynamin family protein	join(914820..914836,914911..914976,915044..915074,915287..915409,915492..916055,916177..916303,916371..916443,916514..916640,916723..917044,917123..917386,917472..917694,917764..917937,918022..918220)	Acanthamoeba castellanii str. Neff	14924488
ACA1_071300	CDS	ACA1_071300	NW_004457654.1	918421	921015	R	encoded by transcript ACA1_071300A; SH3 domain containing protein	complement(join(918421..919391,919609..919749,919860..919975,920073..920107,920149..920786,920852..920968,921012..921015))	Acanthamoeba castellanii str. Neff	14924489
ACA1_071320	CDS	ACA1_071320	NW_004457654.1	926924	928057	D	encoded by transcript ACA1_071320A; HMG (high mobility group) box domain containing protein	926924..928057	Acanthamoeba castellanii str. Neff	14924491
ACA1_071330	CDS	ACA1_071330	NW_004457654.1	928397	932689	D	encoded by transcript ACA1_071330A; peptidase, S9A/B/C family, catalytic subfamily protein	join(928397..928524,928591..928654,928750..928826,928905..928959,929054..929194,929287..929451,929596..929691,929800..929901,930090..930224,930396..930565,930748..930877,931293..931363,931453..931569,931640..931806,931935..932060,932151..932232,932320..932441,932523..932689)	Acanthamoeba castellanii str. Neff	14924492
ACA1_071340	CDS	ACA1_071340	NW_004457654.1	933007	933381	D	encoded by transcript ACA1_071340A; C2 domain containing protein	933007..933381	Acanthamoeba castellanii str. Neff	14924493
ACA1_071350	CDS	ACA1_071350	NW_004457654.1	933506	934326	R	encoded by transcript ACA1_071350A; GTPbinding ADP-ribosylation factor Arf1, putative	complement(join(933506..933611,933707..933801,933912..934026,934100..934326))	Acanthamoeba castellanii str. Neff	14924494
ACA1_071360	CDS	ACA1_071360	NW_004457654.1	934613	942665	D	encoded by transcript ACA1_071360A; transporter, cation channel family	join(934613..934665,934813..934934,935077..935141,935384..935562,935659..935735,935838..935959,936060..936197,936324..936465,936595..936654,936731..936768,936889..937017,937129..937225,937340..937479,937559..937670,937759..937838,937934..938004,938104..938225,938341..938514,938659..938759,938940..939535,939661..939769,939922..940044,940213..940293,940408..940508,940577..940650,940755..940888,941012..941116,941237..941332,941434..941783,941942..942033,942122..942191,942296..942665)	Acanthamoeba castellanii str. Neff	14924495
ACA1_071370	CDS	ACA1_071370	NW_004457654.1	942751	943456	R	encoded by transcript ACA1_071370A; uncharacterized protein	complement(join(942751..943257,943358..943456))	Acanthamoeba castellanii str. Neff	14924496
ACA1_071380	CDS	ACA1_071380	NW_004457654.1	943620	945262	D	encoded by transcript ACA1_071380A; uncharacterized protein	join(943620..943641,943716..944062,944190..945042,945156..945262)	Acanthamoeba castellanii str. Neff	14924497
ACA1_071390	CDS	ACA1_071390	NW_004457654.1	945600	947498	D	encoded by transcript ACA1_071390A; EF hand domain containing protein	join(945600..945645,945723..945896,945970..946175,946355..946404,946514..946569,946641..946700,946778..946806,946904..947012,947114..947155,947276..947314,947407..947498)	Acanthamoeba castellanii str. Neff	14924498
ACA1_071400	CDS	ACA1_071400	NW_004457654.1	947607	948630	D	encoded by transcript ACA1_071400A; uncharacterized protein	join(947607..947654,947781..947931,948014..948186,948256..948337,948422..948630)	Acanthamoeba castellanii str. Neff	14924499
ACA1_071410	CDS	ACA1_071410	NW_004457654.1	948726	949529	R	encoded by transcript ACA1_071410A; uncharacterized protein	complement(948726..949529)	Acanthamoeba castellanii str. Neff	14924500
ACA1_071420	CDS	ACA1_071420	NW_004457654.1	950085	951077	R	encoded by transcript ACA1_071420A; uncharacterized protein	complement(join(950085..950570,950655..950849,950940..951077))	Acanthamoeba castellanii str. Neff	14924501
ACA1_071430	CDS	ACA1_071430	NW_004457654.1	951499	952832	D	encoded by transcript ACA1_071430A; ribosome biogenesis GTPbinding protein YsxC, putative	join(951499..951915,952020..952109,952217..952277,952369..952450,952547..952832)	Acanthamoeba castellanii str. Neff	14924502
ACA1_071440	CDS	ACA1_071440	NW_004457654.1	952909	953729	R	encoded by transcript ACA1_071440A; bicaudal isoform B, putative	complement(join(952909..952959,953061..953260,953407..953480,953644..953729))	Acanthamoeba castellanii str. Neff	14924503
ACA1_071450	CDS	ACA1_071450	NW_004457654.1	955671	956468	D	encoded by transcript ACA1_071450A; glycosyl transferase	955671..956468	Acanthamoeba castellanii str. Neff	14924504
ACA1_071460	CDS	ACA1_071460	NW_004457654.1	956554	960693	R	encoded by transcript ACA1_071460A; leucine rich repeat domain containing protein	complement(join(956554..956771,956894..957488,957578..957793,957902..957996,958063..958133,958300..958373,958458..958558,958657..958795,958868..959203,959359..959502,959544..959858,959945..960135,960243..960411,960481..960693))	Acanthamoeba castellanii str. Neff	14924505
ACA1_071470	CDS	ACA1_071470	NW_004457654.1	960907	963831	D	encoded by transcript ACA1_071470A; serine/threonine kinase	join(960907..960952,961076..961141,961230..961251,961372..961482,961614..961695,961819..961977,962088..962172,962285..962417,962536..962624,962694..962721,962828..962937,963056..963135,963299..963426,963547..963650,963725..963831)	Acanthamoeba castellanii str. Neff	14924506
ACA1_071480	CDS	ACA1_071480	NW_004457654.1	964558	967181	D	encoded by transcript ACA1_071480A; ubiquitin domain containing protein	join(964558..964689,964715..964921,964994..965139,965216..965292,965374..965694,965857..965931,966007..966129,966222..966435,966516..966632,966759..966801,966824..966951,967040..967181)	Acanthamoeba castellanii str. Neff	14924507
ACA1_071490	CDS	ACA1_071490	NW_004457654.1	967377	969395	R	encoded by transcript ACA1_071490A; cyclin, Nterminal domain containing protein	complement(join(967377..967655,967752..968142,968277..968434,968521..968661,968769..969395))	Acanthamoeba castellanii str. Neff	14924508
ACA1_071500	CDS	ACA1_071500	NW_004457654.1	970279	971248	R	encoded by transcript ACA1_071500A; uncharacterized protein	complement(join(970279..970310,970343..970472,970738..970940,971033..971075,971138..971248))	Acanthamoeba castellanii str. Neff	14924509
ACA1_071510	CDS	ACA1_071510	NW_004457654.1	972587	976552	D	encoded by transcript ACA1_071510A; piwi domain containing protein	join(<972587..972823,972955..973074,973142..973190,973305..973451,973525..973618,973732..973893,974030..974171,974243..974360,974508..974674,974930..975165,975396..975474,975572..975706,975823..975932,976015..976115,976190..976303,976422..976552)	Acanthamoeba castellanii str. Neff	14924510
ACA1_071520	CDS	ACA1_071520	NW_004457654.1	976901	977948	D	encoded by transcript ACA1_071520A; piwi domain containing protein	join(976901..977088,977219..977304,977375..977450,977546..977631,977725..977948)	Acanthamoeba castellanii str. Neff	14924511
ACA1_071530	CDS	ACA1_071530	NW_004457654.1	978435	982444	D	encoded by transcript ACA1_071530A; RhoGAP domain containing protein	join(978435..978543,978733..978936,979065..979640,979765..979992,980269..980349,980460..980633,980724..980780,980866..980926,981016..982444)	Acanthamoeba castellanii str. Neff	14924512
ACA1_071540	CDS	ACA1_071540	NW_004457654.1	983325	988281	D	encoded by transcript ACA1_071540A; Dual specificity protein kinase	join(983325..983408,983548..983620,983710..983868,984201..984377,984503..984728,984925..985135,985213..985341,985432..985627,985730..988281)	Acanthamoeba castellanii str. Neff	14924513
ACA1_071550	CDS	ACA1_071550	NW_004457654.1	989233	992867	R	encoded by transcript ACA1_071550A; elongation factor Tu GTP binding domain containing protein	complement(join(989233..989322,989410..989497,989585..989683,989775..990007,990104..990240,990426..990543,990626..990739,990881..991035,991157..991228,991325..991496,991530..991598,991693..991770,991871..992000,992069..992184,992306..992381,992544..992656,992766..992867))	Acanthamoeba castellanii str. Neff	14924514
ACA1_071560	CDS	ACA1_071560	NW_004457654.1	993580	993986	D	encoded by transcript ACA1_071560A; uncharacterized protein	join(993580..993717,993774..993986)	Acanthamoeba castellanii str. Neff	14924515
ACA1_071570	CDS	ACA1_071570	NW_004457654.1	994023	996312	R	encoded by transcript ACA1_071570A; uncharacterized protein	complement(join(994023..994194,994282..994387,994454..994496,994756..994874,994945..995071,995175..995279,995383..995511,995624..995800,995885..995937,996128..996244,996306..996312))	Acanthamoeba castellanii str. Neff	14924516
ACA1_071580	CDS	ACA1_071580	NW_004457654.1	996734	998864	R	encoded by transcript ACA1_071580A; serpin, putative	complement(join(996734..996942,997036..997551,997631..997734,997800..997903,997995..998186,998270..998403,998483..998552,998624..998716,998814..998864))	Acanthamoeba castellanii str. Neff	14924517
ACA1_071590	CDS	ACA1_071590	NW_004457654.1	999240	999584	R	encoded by transcript ACA1_071590A; uncharacterized protein	complement(join(999240..999452,999507..>999584))	Acanthamoeba castellanii str. Neff	14924518
ACA1_071600	CDS	ACA1_071600	NW_004457654.1	1000385	1002520	D	encoded by transcript ACA1_071600A; oxidoreductase, short chain dehydrogenase/reductase superfamily protein	join(1000385..1000389,1000516..1000592,1000669..1000758,1000869..1001005,1001074..1001172,1001362..1001619,1001704..1001778,1001855..1001979,1002066..1002259,1002348..1002520)	Acanthamoeba castellanii str. Neff	14924519
ACA1_071610	CDS	ACA1_071610	NW_004457654.1	1002650	1004248	D	encoded by transcript ACA1_071610A; short-chain dehydrogenase	join(1002650..1002734,1002826..1002956,1003044..1003158,1003251..1003345,1003444..1003588,1003672..1003761,1003859..1004023,1004097..1004248)	Acanthamoeba castellanii str. Neff	14924520
ACA1_071620	CDS	ACA1_071620	NW_004457654.1	1004323	1004854	R	encoded by transcript ACA1_071620A; ADPribosylation/crystallin J1, putative	complement(join(1004323..1004560,1004632..1004732,1004795..1004854))	Acanthamoeba castellanii str. Neff	14924521
ACA1_071630	CDS	ACA1_071630	NW_004457654.1	1005295	1008639	D	encoded by transcript ACA1_071630A; NOL1/NOP2/sun domain containing protein	join(1005295..1005698,1005795..1005900,1005971..1006127,1006213..1006362,1006453..1006566,1006650..1006790,1006856..1006929,1007009..1007181,1007285..1007291,1007304..1007677,1007745..1008024,1008119..1008257,1008318..1008363,1008438..1008639)	Acanthamoeba castellanii str. Neff	14924522
ACA1_071640	CDS	ACA1_071640	NW_004457654.1	1009123	1013356	D	encoded by transcript ACA1_071640A; uncharacterized protein	join(1009123..1009737,1009851..1010025,1010115..1010218,1010320..1010479,1010612..1010724,1010828..1010937,1011050..1011131,1011234..1011373,1011455..1011557,1011641..1011704,1011838..1011980,1012086..1012158,1012317..1012640,1012717..1012792,1012879..1013029,1013126..1013356)	Acanthamoeba castellanii str. Neff	14924523
ACA1_071650	CDS	ACA1_071650	NW_004457654.1	1013776	1016977	D	encoded by transcript ACA1_071650A; acetoacetate decarboxylase	join(1013776..1013877,1013955..1014022,1014123..1014238,1014324..1014363,1014486..1014568,1014649..1014738,1014842..1014957,1015073..1015481,1015584..1015724,1015856..1015946,1016026..1016092,1016195..1016354,1016430..1016530,1016738..1016977)	Acanthamoeba castellanii str. Neff	14924524
ACA1_071660	CDS	ACA1_071660	NW_004457654.1	1017110	1021439	R	encoded by transcript ACA1_071660A; leucine rich repeat domain containing protein	complement(join(1017110..1017224,1017326..1017480,1017604..1017745,1017883..1018021,1018095..1018211,1018299..1018425,1018595..1018697,1018827..1018963,1019100..1019271,1019412..1019499,1019614..1019827,1019915..1020020,1020069..1020228,1020360..1020947,1021019..1021137,1021267..1021439))	Acanthamoeba castellanii str. Neff	14924525
ACA1_071670	CDS	ACA1_071670	NW_004457654.1	1022605	1023246	R	encoded by transcript ACA1_071670A; uncharacterized protein	complement(1022605..1023246)	Acanthamoeba castellanii str. Neff	14924526
ACA1_071680	CDS	ACA1_071680	NW_004457654.1	1023439	1028372	D	encoded by transcript ACA1_071680A; uncharacterized protein	join(1023439..1023731,1023818..1023896,1023973..1024114,1024228..1024321,1024443..1024520,1024664..1024858,1024974..1025153,1025227..1025357,1025470..1025652,1025779..1026017,1026119..1026391,1026484..1026546,1026648..1026783,1026873..1026950,1027042..1027147,1027342..1027387,1027479..1027636,1027739..1028372)	Acanthamoeba castellanii str. Neff	14924527
ACA1_071690	CDS	ACA1_071690	NW_004457654.1	1028641	1030669	D	encoded by transcript ACA1_071690A; vacuolar protein sorting factor 4, putative	join(1028641..1028773,1028839..1028965,1029026..1029087,1029168..1029325,1029396..1029511,1029601..1029831,1029917..1030048,1030151..1030160,1030186..1030291,1030387..1030486,1030597..1030669)	Acanthamoeba castellanii str. Neff	14924528
ACA1_071700	CDS	ACA1_071700	NW_004457654.1	1031091	1031570	R	encoded by transcript ACA1_071700A; uncharacterized protein	complement(1031091..1031570)	Acanthamoeba castellanii str. Neff	14924529
ACA1_071710	CDS	ACA1_071710	NW_004457654.1	1031688	1032543	D	encoded by transcript ACA1_071710A; 6-pyruvoyltetrahydropterin synthase family protein, putative	join(1031688..1031933,1032033..1032119,1032212..1032314,1032479..1032543)	Acanthamoeba castellanii str. Neff	14924530
ACA1_071720	CDS	ACA1_071720	NW_004457654.1	1033498	1035107	R	encoded by transcript ACA1_071720A; meiotic recombinase Dmc1, putative	complement(join(1033498..1033551,1033625..1033746,1033823..1034009,1034086..1034174,1034256..1034332,1034397..1034508,1034575..1034779,1034876..1035077,1035094..1035107))	Acanthamoeba castellanii str. Neff	14924531
ACA1_071730	CDS	ACA1_071730	NW_004457654.1	1035479	1036548	D	encoded by transcript ACA1_071730A; uncharacterized protein	join(1035479..1035524,1035625..1035845,1035997..1036548)	Acanthamoeba castellanii str. Neff	14924532
ACA1_071740	CDS	ACA1_071740	NW_004457654.1	1036823	1037986	R	encoded by transcript ACA1_071740A; Fbox domain containing protein	complement(join(1036823..1036970,1037051..1037158,1037246..1037402,1037459..1037663,1037732..1037806,1037897..1037986))	Acanthamoeba castellanii str. Neff	14924533
ACA1_071750	CDS	ACA1_071750	NW_004457654.1	1038645	1039229	R	encoded by transcript ACA1_071750A; uncharacterized protein	complement(join(1038645..1038715,1038789..1038823,1038887..1038975,1039200..1039229))	Acanthamoeba castellanii str. Neff	14924534
ACA1_071760	CDS	ACA1_071760	NW_004457654.1	1039343	1040896	D	encoded by transcript ACA1_071760A; carrier superfamily protein	join(1039343..1039370,1039451..1039549,1039616..1039691,1039772..1039878,1039958..1040049,1040112..1040216,1040295..1040422,1040491..1040620,1040692..1040755,1040826..1040896)	Acanthamoeba castellanii str. Neff	14924535
ACA1_071770	CDS	ACA1_071770	NW_004457654.1	1041157	1046452	D	encoded by transcript ACA1_071770A; dual specificity phosphatase, catalytic domain containing protein	join(1041157..1041277,1041459..1041572,1041665..1041760,1041882..1042999,1043157..1043273,1043364..1043954,1044042..1044156,1044259..1045345,1045453..1045511,1045656..1045717,1045808..1045909,1046053..1046160,1046282..1046452)	Acanthamoeba castellanii str. Neff	14924536
ACA1_071780	CDS	ACA1_071780	NW_004457654.1	1046937	1049131	D	encoded by transcript ACA1_071780A; Adenylate kinase	join(1046937..1046964,1047104..1047186,1047313..1047477,1047578..1047745,1047834..1048202,1048334..1049014,1049117..1049131)	Acanthamoeba castellanii str. Neff	14924537
ACA1_071790	CDS	ACA1_071790	NW_004457654.1	1050865	1053802	R	encoded by transcript ACA1_071790A; inositol 1,3,4,5,6pentakisphosphate 2-kinase	complement(join(1050865..1051093,1051189..1051366,1051470..1051571,1051738..1051841,1051953..1052038,1052177..1052282,1052382..1052506,1052604..1052819,1053025..1053122,1053223..1053337,1053488..1053595,1053689..1053802))	Acanthamoeba castellanii str. Neff	14924538
ACA1_071800	CDS	ACA1_071800	NW_004457654.1	1053902	1056659	D	encoded by transcript ACA1_071800A; pentatricopeptide repeat domain containing protein	join(1053902..1054008,1054208..1054418,1054542..1054873,1054964..1055182,1055262..1055413,1055539..1055654,1055789..1055986,1056112..1056447,1056510..1056659)	Acanthamoeba castellanii str. Neff	14924539
ACA1_071810	CDS	ACA1_071810	NW_004457654.1	1057232	1058236	D	encoded by transcript ACA1_071810A; uncharacterized protein	join(1057232..1057347,1057459..1057655,1057747..1057874,1057965..1058089,1058164..1058236)	Acanthamoeba castellanii str. Neff	14924540
ACA1_071820	CDS	ACA1_071820	NW_004457654.1	1059012	1060117	D	encoded by transcript ACA1_071820A; uncharacterized protein	join(1059012..1059316,1059462..1059505,1059538..1059587,1059893..1060117)	Acanthamoeba castellanii str. Neff	14924541
ACA1_071830	CDS	ACA1_071830	NW_004457654.1	1060515	1076039	D	encoded by transcript ACA1_071830A; Beige/BEACH domain containing protein	join(1060515..1060640,1060798..1060955,1061015..1061104,1061189..1061327,1061451..1061478,1061659..1061809,1061920..1062094,1062180..1062293,1062376..1062499,1062600..1062682,1062810..1062997,1063126..1063238,1063358..1063496,1063588..1063976,1064085..1064335,1064426..1064594,1064714..1064960,1065030..1065562,1065649..1065773,1065871..1065967,1066054..1066251,1066349..1066465,1066550..1066674,1066777..1067363,1067459..1067814,1067941..1068059,1068138..1068274,1068385..1068532,1068608..1068686,1068764..1069020,1069114..1069218,1069294..1069549,1069640..1069786,1069866..1070077,1070198..1070328,1070434..1070551,1070666..1070841,1070967..1071048,1071121..1071412,1071546..1071673,1071753..1071873,1071961..1072108,1072195..1072439,1072507..1072673,1072762..1072872,1072970..1073226,1073317..1073385,1073483..1073659,1073735..1074158,1074245..1074343,1074410..1074533,1074634..1074743,1074836..1074937,1075127..1075309,1075400..1075491,1075605..1075724,1075838..1076039)	Acanthamoeba castellanii str. Neff	14924542
ACA1_071840	CDS	ACA1_071840	NW_004457654.1	1076753	1081987	D	encoded by transcript ACA1_071840A; DIL domain containing protein	join(1076753..1077016,1077122..1077259,1077418..1077470,1077568..1077619,1077708..1077782,1077848..1078458,1078544..1078679,1078837..1079679,1079750..1079869,1079950..1080127,1080299..1080462,1080649..1080731,1080973..1081139,1081265..1081343,1081407..1081553,1081789..1081987)	Acanthamoeba castellanii str. Neff	14924543
ACA1_071850	CDS	ACA1_071850	NW_004457654.1	1082413	1082773	D	encoded by transcript ACA1_071850A; uncharacterized protein	join(1082413..1082472,1082566..1082706,1082726..1082773)	Acanthamoeba castellanii str. Neff	14924544
ACA1_071860	CDS	ACA1_071860	NW_004457654.1	1082908	1083604	D	encoded by transcript ACA1_071860A; GATA zinc finger domain containing protein	join(1082908..1083109,1083167..1083332,1083415..1083604)	Acanthamoeba castellanii str. Neff	14924545
ACA1_071870	CDS	ACA1_071870	NW_004457654.1	1083839	1093596	D	encoded by transcript ACA1_071870A; HEAT repeat domain containing protein	join(1083839..1084076,1084280..1084785,1084893..1085095,1085217..1085326,1085432..1085711,1085837..1086067,1086138..1086440,1086528..1086663,1086785..1087525,1087601..1087680,1087760..1087896,1088015..1088232,1088355..1088496,1088600..1088931,1089031..1089171,1089278..1089454,1089572..1089781,1089878..1090038,1090231..1090420,1090595..1090883,1091092..1091361,1091446..1091662,1091771..1091786,1091849..1091944,1092048..1092237,1092316..1092413,1092490..1092938,1093031..1093148,1093167..1093353,1093427..1093596)	Acanthamoeba castellanii str. Neff	14924546
ACA1_071880	CDS	ACA1_071880	NW_004457654.1	1093755	1094391	D	encoded by transcript ACA1_071880A; cytochrome b-like protein	join(1093755..1093833,1093987..1094129,1094230..1094391)	Acanthamoeba castellanii str. Neff	14924547
ACA1_071890	CDS	ACA1_071890	NW_004457654.1	1095600	1098229	R	encoded by transcript ACA1_071890A; FHA domain containing protein	complement(join(1095600..1095783,1095871..1096037,1096134..1096211,1096326..1096793,1096879..1097009,1097142..1097258,1097390..1097505,1097686..1097736,1097894..1097992,1098111..1098229))	Acanthamoeba castellanii str. Neff	14924548
ACA1_071900	CDS	ACA1_071900	NW_004457654.1	1098967	1099548	D	encoded by transcript ACA1_071900A; uncharacterized protein	1098967..1099548	Acanthamoeba castellanii str. Neff	14924549
ACA1_071910	CDS	ACA1_071910	NW_004457654.1	1099937	1109554	R	encoded by transcript ACA1_071910A; uncharacterized protein	complement(join(1099937..1100187,1100330..1100489,1100589..1100754,1100853..1100932,1101041..1101163,1101263..1101352,1101510..1101644,1101741..1101833,1101915..1102081,1102175..1102315,1102411..1102771,1102867..1103050,1103122..1103413,1103516..1103663,1103749..1103843,1103929..1104019,1104122..1104368,1104449..1104761,1104871..1105018,1105109..1105246,1105323..1105436,1105551..1106098,1106189..1106587,1106701..1106877,1106982..1107202,1107288..1107358,1107438..1107679,1107759..1107928,1108000..1108186,1108265..1108439,1108528..1109276,1109527..1109554))	Acanthamoeba castellanii str. Neff	14924550
ACA1_071920	CDS	ACA1_071920	NW_004457654.1	1109863	1111328	D	encoded by transcript ACA1_071920A; Mitochondrial matrix Mmp37 protein, putative	join(1109863..1110024,1110096..1110278,1110355..1110447,1110526..1110655,1110741..1110889,1110968..1111157,1111261..1111328)	Acanthamoeba castellanii str. Neff	14924551
ACA1_071930	CDS	ACA1_071930	NW_004457654.1	1111446	1112028	D	encoded by transcript ACA1_071930A; uncharacterized protein	join(1111446..1111453,1111523..1111617,1111740..1111870,1111939..1112028)	Acanthamoeba castellanii str. Neff	14924552
ACA1_071940	CDS	ACA1_071940	NW_004457654.1	1112527	1114429	D	encoded by transcript ACA1_071940A; leucine rich repeat domain containing protein	join(1112527..1112934,1113024..1113136,1113237..1113310,1113384..1113454,1113515..1113642,1113705..1113883,1113973..1114147,1114249..1114429)	Acanthamoeba castellanii str. Neff	14924553
ACA1_071950	CDS	ACA1_071950	NW_004457654.1	1114518	1115634	R	encoded by transcript ACA1_071950A; uncharacterized protein	complement(join(1114518..1114583,1114704..1114828,1114915..1114949,1115019..1115104,1115191..1115441,1115535..1115634))	Acanthamoeba castellanii str. Neff	14924554
ACA1_071960	CDS	ACA1_071960	NW_004457654.1	1115742	1117100	D	encoded by transcript ACA1_071960A; uncharacterized protein	join(1115742..1116026,1116177..1116432,1116490..1116549,1116643..1116763,1116848..1117100)	Acanthamoeba castellanii str. Neff	14924555
ACA1_071970	CDS	ACA1_071970	NW_004457654.1	1117479	1120335	D	encoded by transcript ACA1_071970A; Choline/Carnitine oacyltransferase superfamily protein	join(<1117479..1117711,1117819..1117984,1118085..1118299,1118374..1118486,1118566..1118651,1118743..1118900,1118981..1119107,1119225..1119406,1119478..1119568,1119654..1119732,1119830..1119972,1120079..1120154,1120211..1120335)	Acanthamoeba castellanii str. Neff	14924556
ACA1_071980	CDS	ACA1_071980	NW_004457654.1	1120556	1121889	D	encoded by transcript ACA1_071980A; CCCHtype Zn finger-containing protein	join(1120556..1120685,1120774..1120962,1121056..1121157,1121274..1121500,1121590..1121679,1121773..1121889)	Acanthamoeba castellanii str. Neff	14924557
ACA1_071990	CDS	ACA1_071990	NW_004457654.1	1122152	1122523	R	encoded by transcript ACA1_071990A; C2 domain containing protein	complement(1122152..1122523)	Acanthamoeba castellanii str. Neff	14924558
ACA1_072000	CDS	ACA1_072000	NW_004457654.1	1122966	1124421	R	encoded by transcript ACA1_072000A; GATA zinc finger domain containing protein	complement(join(1122966..1123353,1123432..1123600,1123649..1123733,1123930..1124421))	Acanthamoeba castellanii str. Neff	14924559
ACA1_072010	CDS	ACA1_072010	NW_004457654.1	1125798	1126456	R	encoded by transcript ACA1_072010A; uncharacterized protein	complement(join(1125798..1125928,1126076..1126168,1126250..1126293,1126377..1126456))	Acanthamoeba castellanii str. Neff	14924560
ACA1_072020	CDS	ACA1_072020	NW_004457654.1	1126620	1132333	R	encoded by transcript ACA1_072020A; leucinerich repeat kinase	complement(join(1126620..1126773,1126877..1127156,1127248..1127353,1127472..1127648,1127762..1127843,1127935..1128029,1128132..1128277,1128381..1128510,1128651..1128854,1129012..1129099,1129188..1130035,1130135..1130415,1130483..1130669,1130767..1130972,1131044..1131194,1131306..1131486,1131583..1131694,1131797..1131962,1132019..1132094,1132254..1132333))	Acanthamoeba castellanii str. Neff	14924561
ACA1_072030	CDS	ACA1_072030	NW_004457654.1	1132732	1135964	D	encoded by transcript ACA1_072030A; ATPase, AAA domain containing protein	join(1132732..1133163,1133325..1133457,1133642..1133866,1133987..1134270,1134384..1134524,1134682..1134975,1135086..1135295,1135393..1135588,1135667..1135779,1135851..1135964)	Acanthamoeba castellanii str. Neff	14924562
ACA1_072040	CDS	ACA1_072040	NW_004457654.1	1136109	1136476	R	encoded by transcript ACA1_072040A; uncharacterized protein	complement(join(1136109..1136269,1136338..1136476))	Acanthamoeba castellanii str. Neff	14924563
ACA1_072050	CDS	ACA1_072050	NW_004457654.1	1137044	1138526	D	encoded by transcript ACA1_072050A; uncharacterized protein	join(1137044..1137824,1137895..1138164,1138246..1138336,1138460..1138526)	Acanthamoeba castellanii str. Neff	14924564
ACA1_072060	CDS	ACA1_072060	NW_004457654.1	1138838	1140133	D	encoded by transcript ACA1_072060A; uncharacterized protein	1138838..1140133	Acanthamoeba castellanii str. Neff	14924565
ACA1_072070	CDS	ACA1_072070	NW_004457654.1	1140321	1140793	D	encoded by transcript ACA1_072070A; uncharacterized protein	join(1140321..1140512,1140608..1140793)	Acanthamoeba castellanii str. Neff	14924566
ACA1_072080	CDS	ACA1_072080	NW_004457654.1	1140931	1143814	R	encoded by transcript ACA1_072080A; ubiquitin domain containing protein	complement(join(1140931..1141072,1141179..1141306,1141329..1141368,1141466..1141582,1141652..1141865,1141941..1142063,1142155..1142229,1142309..1142460,1142533..1142717,1142822..1143006,1143104..1143180,1143251..1143399,1143482..1143656,1143723..1143814))	Acanthamoeba castellanii str. Neff	14924567
ACA1_072090	CDS	ACA1_072090	NW_004457654.1	1143999	1145236	R	encoded by transcript ACA1_072090A; Eukaryotic translation initiation factor 3 subunit	complement(join(1143999..1144020,1144105..1144182,1144302..1144464,1144559..1144642,1144783..1145236))	Acanthamoeba castellanii str. Neff	14924568
ACA1_072100	CDS	ACA1_072100	NW_004457654.1	1145559	1146708	D	encoded by transcript ACA1_072100A; ARP2/3 complex 34 kDa subunit	join(1145559..1145626,1145741..1145991,1146054..1146398,1146479..1146708)	Acanthamoeba castellanii str. Neff	14924569
ACA1_072110	CDS	ACA1_072110	NW_004457654.1	1147123	1150318	D	encoded by transcript ACA1_072110A; MYND finger domain containing protein	join(1147123..1147333,1147476..1147773,1147922..1148118,1148217..1148317,1148401..1148524,1148650..1148822,1148912..1149115,1149209..1149304,1149404..1149695,1149797..1149919,1150024..1150136,1150241..1150318)	Acanthamoeba castellanii str. Neff	14924570
ACA1_072120	CDS	ACA1_072120	NW_004457654.1	1150756	1151083	D	encoded by transcript ACA1_072120A; uncharacterized protein	join(1150756..1150940,1151032..1151083)	Acanthamoeba castellanii str. Neff	14924571
ACA1_072130	CDS	ACA1_072130	NW_004457654.1	1152366	1158068	D	encoded by transcript ACA1_072130A; uncharacterized protein	join(1152366..1152519,1152596..1152690,1152799..1153244,1153421..1153530,1153606..1153746,1153831..1153967,1154072..1154128,1154236..1154328,1154423..1154723,1154822..1154912,1154986..1155064,1155159..1155293,1155367..1155507,1155643..1155718,1155809..1156107,1156375..1156532,1156640..1156772,1156817..1156910,1156992..1157202,1157275..1157376,1157484..1157588,1157678..1158068)	Acanthamoeba castellanii str. Neff	14924572
ACA1_072140	CDS	ACA1_072140	NW_004457654.1	1158176	1158894	R	encoded by transcript ACA1_072140A; Ras family protein rasG, putative	complement(join(1158176..1158545,1158677..1158894))	Acanthamoeba castellanii str. Neff	14924573
ACA1_072150	CDS	ACA1_072150	NW_004457654.1	1159131	1159817	R	encoded by transcript ACA1_072150A; universal stress domain containing protein	complement(join(1159131..1159325,1159355..1159387,1159425..1159817))	Acanthamoeba castellanii str. Neff	14924574
ACA1_072160	CDS	ACA1_072160	NW_004457654.1	1160065	1164065	D	encoded by transcript ACA1_072160A; SET domain containing protein	join(1160065..1160134,1160205..1160354,1160442..1160549,1160675..1160837,1160946..1161060,1161163..1161247,1161330..1161421,1161507..1161621,1161660..1161911,1162069..1162484,1162588..1163003,1163093..1164065)	Acanthamoeba castellanii str. Neff	14924575
ACA1_072170	CDS	ACA1_072170	NW_004457654.1	1164458	1169695	D	encoded by transcript ACA1_072170A; poly(A)specific ribonuclease subunit protein, putative	join(1164458..1164874,1164971..1165180,1165320..1165388,1165494..1165594,1165695..1165790,1165883..1165968,1166083..1166213,1166291..1166370,1166477..1166590,1166699..1166828,1166909..1167010,1167126..1167211,1167313..1167412,1167494..1167985,1168102..1168230,1168333..1168500,1168567..1168631,1168712..1168814,1168902..1169055,1169129..1169235,1169317..1169429,1169545..1169608,1169666..1169695)	Acanthamoeba castellanii str. Neff	14924576
ACA1_072180	CDS	ACA1_072180	NW_004457654.1	1169839	1170225	R	encoded by transcript ACA1_072180A; antibiotic biosynthesis monooxygenase, putative	complement(join(1169839..1169997,1170070..1170225))	Acanthamoeba castellanii str. Neff	14924577
ACA1_072190	CDS	ACA1_072190	NW_004457654.1	1170642	1173298	D	encoded by transcript ACA1_072190A; Poly(A)-specific ribonuclease	join(1170642..1170843,1170923..1170945,1171146..1171229,1171297..1171464,1171568..1171921,1172084..1172306,1172381..1172451,1172576..1172653,1172772..1172795,1172878..1173042,1173185..1173298)	Acanthamoeba castellanii str. Neff	14924578
ACA1_072200	CDS	ACA1_072200	NW_004457654.1	1173470	1174767	D	encoded by transcript ACA1_072200A; RNA recognition motif domain containing protein	join(1173470..1173627,1173726..1173855,1173988..1174767)	Acanthamoeba castellanii str. Neff	14924579
ACA1_072210	CDS	ACA1_072210	NW_004457654.1	1176765	1177473	D	encoded by transcript ACA1_072210A; uncharacterized protein	join(<1176765..1176886,1176969..1177035,1177134..1177179,1177280..1177354,1177448..1177473)	Acanthamoeba castellanii str. Neff	14924580
ACA1_072220	CDS	ACA1_072220	NW_004457654.1	1177803	1178468	R	encoded by transcript ACA1_072220A; Ras family protein	complement(join(1177803..1178196,1178272..1178468))	Acanthamoeba castellanii str. Neff	14924581
ACA1_072230	CDS	ACA1_072230	NW_004457654.1	1178689	1179420	D	encoded by transcript ACA1_072230A; uncharacterized protein	join(1178689..1178886,1178973..1179048,1179150..1179233,1179326..1179420)	Acanthamoeba castellanii str. Neff	14924582
ACA1_072240	CDS	ACA1_072240	NW_004457654.1	1180149	1180792	D	encoded by transcript ACA1_072240A; uncharacterized protein	join(1180149..1180218,1180262..1180431,1180529..1180600,1180655..1180792)	Acanthamoeba castellanii str. Neff	14924583
ACA1_072250	CDS	ACA1_072250	NW_004457654.1	1180880	1181597	R	encoded by transcript ACA1_072250A; uncharacterized protein	complement(join(1180880..1181062,1181159..1181392,1181502..1181597))	Acanthamoeba castellanii str. Neff	14924584
ACA1_072260	CDS	ACA1_072260	NW_004457654.1	1181659	1186376	R	encoded by transcript ACA1_072260A; phospholipase, patatin family protein	complement(join(1181659..1181931,1182002..1182132,1182199..1182349,1182586..1182725,1182818..1182913,1183066..1183235,1183328..1183442,1183512..1183673,1183807..1183903,1183978..1184111,1184206..1184536,1184557..1184641,1184696..1184767,1184895..1184977,1185011..1185095,1185175..1185287,1185359..1185460,1185554..1185631,1185713..1185761,1185835..1186039,1186121..1186376))	Acanthamoeba castellanii str. Neff	14924585
ACA1_072270	CDS	ACA1_072270	NW_004457654.1	1187171	1187450	D	encoded by transcript ACA1_072270A; Fbox domain containing protein	join(1187171..1187392,1187424..1187450)	Acanthamoeba castellanii str. Neff	14924586
ACA1_072280	CDS	ACA1_072280	NW_004457654.1	1187917	1188301	D	encoded by transcript ACA1_072280A; uncharacterized protein	join(<1187917..1187984,1188058..1188301)	Acanthamoeba castellanii str. Neff	14924587
ACA1_072290	CDS	ACA1_072290	NW_004457654.1	1188395	1192842	R	encoded by transcript ACA1_072290A; Low temperature viability protein	complement(join(1188395..1188505,1188602..1188701,1188785..1188929,1189034..1189293,1189365..1189453,1189534..1189742,1189821..1189937,1190023..1190116,1190220..1190434,1190516..1190858,1190948..1191097,1191415..1191686,1191772..1191832,1191878..1191905,1191985..1192017,1192086..1192207,1192341..1192497,1192580..1192842))	Acanthamoeba castellanii str. Neff	14924588
ACA1_072300	CDS	ACA1_072300	NW_004457654.1	1192983	1194002	D	encoded by transcript ACA1_072300A; RNA recognition motif domain containing protein	join(1192983..1193072,1193112..1193209,1193588..1194002)	Acanthamoeba castellanii str. Neff	14924589
ACA1_072310	CDS	ACA1_072310	NW_004457654.1	1194570	1197864	D	encoded by transcript ACA1_072310A; uncharacterized protein	join(1194570..1195008,1195090..1195159,1195240..1195361,1195422..1195486,1195567..1195660,1195785..1197303,1197393..1197864)	Acanthamoeba castellanii str. Neff	14924590
ACA1_072320	CDS	ACA1_072320	NW_004457654.1	1198124	1198561	R	encoded by transcript ACA1_072320A; uncharacterized protein	complement(join(1198124..1198159,1198244..1198561))	Acanthamoeba castellanii str. Neff	14924591
ACA1_072330	CDS	ACA1_072330	NW_004457654.1	1198894	1202959	R	encoded by transcript ACA1_072330A; Ubiquitinlike modifier-activating enzyme 1, putative	complement(join(1198894..1199062,1199152..1199246,1199325..1199537,1199609..1199767,1199842..1200199,1200291..1200700,1200768..1200892,1200981..1201257,1201348..1201491,1201579..1201929,1201999..1202654,1202788..1202959))	Acanthamoeba castellanii str. Neff	14924592
ACA1_072340	CDS	ACA1_072340	NW_004457654.1	1203313	1205489	D	encoded by transcript ACA1_072340A; Ser/Thr phosphatase family superfamily protein	join(1203313..1203643,1203726..1203770,1203883..1204022,1204097..1204208,1204277..1204374,1204443..1204507,1204601..1204709,1204782..1204849,1204930..1205021,1205094..1205236,1205258..1205374,1205460..1205489)	Acanthamoeba castellanii str. Neff	14924593
ACA1_072350	CDS	ACA1_072350	NW_004457654.1	1205824	1208835	D	encoded by transcript ACA1_072350A; ubiquitin carboxyl-terminal hydrolase	join(<1205824..1206003,1206087..1206200,1206320..1206476,1206558..1206660,1206757..1206844,1206922..1206953,1207092..1207222,1207283..1207506,1207587..1207809,1207873..1208292,1208371..1208662,1208757..1208835)	Acanthamoeba castellanii str. Neff	14924594
ACA1_072360	CDS	ACA1_072360	NW_004457654.1	1209570	1211146	D	encoded by transcript ACA1_072360A; UBX domain containing protein	join(1209570..1210484,1210587..1210707,1210791..1211146)	Acanthamoeba castellanii str. Neff	14924595
ACA1_072370	CDS	ACA1_072370	NW_004457654.1	1211292	1213539	R	encoded by transcript ACA1_072370A; leucine rich repeat domain containing protein	complement(join(1211292..1211435,1211604..1211698,1211823..1211942,1212048..1212198,1212293..1212582,1212662..1212767,1212853..1212946,1213053..1213141,1213217..1213329,1213446..>1213539))	Acanthamoeba castellanii str. Neff	14924596
ACA1_072480	CDS	ACA1_072480	NW_004457654.1	1214027	1214775	R	encoded by transcript ACA1_072480A; uncharacterized protein	complement(join(1214027..1214252,1214346..1214424,1214499..1214775))	Acanthamoeba castellanii str. Neff	14924597
ACA1_072490	CDS	ACA1_072490	NW_004457654.1	1215111	1216525	D	encoded by transcript ACA1_072490A; CBS domain containing protein	join(1215111..1215257,1215362..1215435,1215499..1215656,1215745..1215932,1216010..1216363,1216424..1216525)	Acanthamoeba castellanii str. Neff	14924598
ACA1_072500	CDS	ACA1_072500	NW_004457654.1	1216598	1218898	R	encoded by transcript ACA1_072500A; Fbox domain containing protein	complement(join(1216598..1216627,1216720..1216853,1216924..1216961,1217049..1217166,1217260..1217354,1217429..1217655,1217738..1217831,1217930..1218019,1218087..1218524,1218612..1218898))	Acanthamoeba castellanii str. Neff	14924599
ACA1_072510	CDS	ACA1_072510	NW_004457654.1	1219227	1219625	R	encoded by transcript ACA1_072510A; uncharacterized protein	complement(1219227..1219625)	Acanthamoeba castellanii str. Neff	14924600
ACA1_072520	CDS	ACA1_072520	NW_004457654.1	1219927	1220666	R	encoded by transcript ACA1_072520A; uncharacterized protein	complement(join(1219927..1220576,1220648..1220666))	Acanthamoeba castellanii str. Neff	14924601
ACA1_072530	CDS	ACA1_072530	NW_004457654.1	1220769	1221183	D	encoded by transcript ACA1_072530A; cytochrome c oxidase assembly protein, putative	join(1220769..1220959,1221039..1221183)	Acanthamoeba castellanii str. Neff	14924602
ACA1_072540	CDS	ACA1_072540	NW_004457654.1	1221294	1221628	R	encoded by transcript ACA1_072540A; Smlike protein LSm6, putative	complement(join(1221294..1221448,1221529..1221628))	Acanthamoeba castellanii str. Neff	14924603
ACA1_072550	CDS	ACA1_072550	NW_004457654.1	1221762	1222950	D	encoded by transcript ACA1_072550A; estrogen receptor binding protein	join(1221762..1221928,1222013..1222105,1222196..1222337,1222460..1222606,1222729..1222803,1222831..1222950)	Acanthamoeba castellanii str. Neff	14924604
ACA1_072560	CDS	ACA1_072560	NW_004457654.1	1223188	1224335	D	encoded by transcript ACA1_072560A; tetratricopeptide repeat domain containing protein	join(1223188..1223434,1223545..1223673,1223773..1223906,1224032..1224111,1224218..1224335)	Acanthamoeba castellanii str. Neff	14924605
ACA1_072570	CDS	ACA1_072570	NW_004457654.1	1224590	1226665	D	encoded by transcript ACA1_072570A; uncharacterized protein	join(1224590..1224712,1224781..1224806,1224911..1225015,1225150..1225240,1225426..1225551,1225632..1225746,1225888..1226004,1226081..1226173,1226260..1226318,1226426..1226665)	Acanthamoeba castellanii str. Neff	14924606
ACA1_072580	CDS	ACA1_072580	NW_004457654.1	1226762	1228889	R	encoded by transcript ACA1_072580A; acylCoA thioester hydrolase	complement(join(1226762..1226984,1227071..1227144,1227231..1227304,1227392..1227505,1227586..1227708,1227840..1227906,1228044..1228174,1228280..1228408,1228535..1228642,1228766..1228889))	Acanthamoeba castellanii str. Neff	14924607
ACA1_072590	CDS	ACA1_072590	NW_004457654.1	1229202	1231089	R	encoded by transcript ACA1_072590A; FAD binding domain containing protein	complement(join(1229202..1229364,1229479..1229573,1229650..1229760,1229850..1229924,1230015..1230128,1230226..1231089))	Acanthamoeba castellanii str. Neff	14924608
ACA1_072600	CDS	ACA1_072600	NW_004457654.1	1231373	1233318	R	encoded by transcript ACA1_072600A; cobalamin biosynthesis protein CobW	complement(join(1231373..1231516,1231604..1231804,1231871..1232101,1232297..1232475,1232537..1232628,1232717..1232813,1232942..1233017,1233104..1233145,1233223..1233318))	Acanthamoeba castellanii str. Neff	14924609
ACA1_072610	CDS	ACA1_072610	NW_004457654.1	1233418	1234804	D	encoded by transcript ACA1_072610A; uncharacterized protein	join(1233418..1233631,1233729..1233991,1234104..1234418,1234503..1234702,1234756..1234804)	Acanthamoeba castellanii str. Neff	14924610
ACA1_072630	CDS	ACA1_072630	NW_004457654.1	1239646	1240436	D	encoded by transcript ACA1_072630A; alkylated dna repair protein alkb 7 family protein	join(1239646..1239801,1239911..1239961,1239998..1240176,1240250..1240436)	Acanthamoeba castellanii str. Neff	14924612
ACA1_072640	CDS	ACA1_072640	NW_004457654.1	1240483	1241946	R	encoded by transcript ACA1_072640A; uncharacterized protein	complement(1240483..1241946)	Acanthamoeba castellanii str. Neff	14924613
ACA1_072650	CDS	ACA1_072650	NW_004457654.1	1243225	1245290	D	encoded by transcript ACA1_072650A; RhoGAP domain containing protein	join(1243225..1243264,1243385..1243504,1243609..1244646,1244780..1244867,1244969..1245290)	Acanthamoeba castellanii str. Neff	14924614
ACA1_072660	CDS	ACA1_072660	NW_004457654.1	1245528	1248795	D	encoded by transcript ACA1_072660A; uncharacterized protein	join(1245528..1245829,1245896..1246040,1246119..1246274,1246350..1246556,1246617..1246724,1246793..1246978,1247119..1247299,1247385..1247629,1247711..1247825,1247885..1248467,1248582..1248795)	Acanthamoeba castellanii str. Neff	14924615
ACA1_072670	CDS	ACA1_072670	NW_004457654.1	1249030	1251597	D	encoded by transcript ACA1_072670A; glycosyltransferase sugar-binding region containing DXD motif protein	1249030..1251597	Acanthamoeba castellanii str. Neff	14924616
ACA1_072680	CDS	ACA1_072680	NW_004457654.1	1251892	1254058	D	encoded by transcript ACA1_072680A; uncharacterized protein	join(1251892..1251988,1252000..1252115,1252216..1252253,1252428..1252636,1252722..1252840,1252957..1253144,1253242..1253350,1253438..1253587,1253690..1253897,1253994..1254058)	Acanthamoeba castellanii str. Neff	14924617
ACA1_072690	CDS	ACA1_072690	NW_004457654.1	1254279	1256074	D	encoded by transcript ACA1_072690A; signal peptide peptidase	join(<1254279..1254619,1254747..1254859,1254948..1255092,1255217..1255313,1255414..1255506,1255617..1255704,1255803..1256074)	Acanthamoeba castellanii str. Neff	14924618
ACA1_072700	CDS	ACA1_072700	NW_004457654.1	1256220	1270616	R	encoded by transcript ACA1_072700A; uncharacterized protein	complement(join(1256220..1256378,1256499..1256564,1256646..1256773,1256857..1256962,1257084..1257243,1257493..1257619,1257708..1257800,1257927..1258082,1258246..1258292,1258388..1258521,1258579..1258778,1258849..1258925,1259058..1259152,1259229..1259321,1259419..1259533,1259662..1259760,1260077..1260234,1260347..1260546,1260565..1260755,1260842..1260941,1261041..1261131,1261207..1261273,1261426..1262321,1262424..1262567,1262693..1262821,1262943..1263044,1263158..1263229,1263266..1263406,1263488..1263676,1263792..1263987,1264053..1264295,1264376..1264534,1264615..1264710,1264792..1264906,1265026..1265118,1265226..1265377,1265508..1265831,1266040..1266300,1266434..1266666,1266743..1266818,1266896..1266970,1267028..1267101,1267201..1267293,1267384..1269549,1269579..1269616,1269919..1270035,1270143..1270350,1270500..1270616))	Acanthamoeba castellanii str. Neff	14924619
ACA1_072710	CDS	ACA1_072710	NW_004457654.1	1271312	1274424	D	encoded by transcript ACA1_072710A; ABC transporter, ATPbinding domain containing protein	join(1271312..1272012,1272094..1273136,1273240..1273604,1273726..1274424)	Acanthamoeba castellanii str. Neff	14924620
ACA1_072720	CDS	ACA1_072720	NW_004457654.1	1274445	1277981	R	encoded by transcript ACA1_072720A; glycerol kinase	complement(join(1274445..1274659,1274729..1274939,1275102..1275184,1275284..1275398,1275502..1275601,1275697..1275899,1275995..1276119,1276225..1276379,1276461..1276509,1276621..1276715,1276806..1276927,1277043..1277981))	Acanthamoeba castellanii str. Neff	14924621
ACA1_072730	CDS	ACA1_072730	NW_004457654.1	1278598	1281325	D	encoded by transcript ACA1_072730A; uncharacterized protein	join(1278598..1278745,1278849..1278924,1279010..1279134,1279205..1279416,1279511..1279689,1279774..1279869,1279959..1280079,1280156..1280239,1280325..1280453,1280529..1280590,1280723..1280810,1280895..1281001,1281087..1281176,1281271..1281325)	Acanthamoeba castellanii str. Neff	14924622
ACA1_072740	CDS	ACA1_072740	NW_004457654.1	1281533	1284782	R	encoded by transcript ACA1_072740A; BTB/POZ domain containing protein	complement(join(1281533..1281674,1281774..1281911,1282057..1282269,1282367..1282481,1282596..1283123,1283250..1283514,1283609..1283918,1284040..1284239,1284260..1284391,1284488..1284672,1284761..1284782))	Acanthamoeba castellanii str. Neff	14924623
ACA1_072750	CDS	ACA1_072750	NW_004457654.1	1284922	1285468	D	encoded by transcript ACA1_072750A; uncharacterized protein	join(1284922..1284994,1285086..1285468)	Acanthamoeba castellanii str. Neff	14924624
ACA1_072760	CDS	ACA1_072760	NW_004457654.1	1285693	1288999	R	encoded by transcript ACA1_072760A; acylCoA synthetase	complement(join(1285693..1285997,1286082..1286215,1286324..1286462,1286547..1286709,1286835..1286953,1287314..1287447,1287548..1287687,1287805..1288095,1288281..1288389,1288471..1288600,1288756..1288999))	Acanthamoeba castellanii str. Neff	14924625
ACA1_072770	CDS	ACA1_072770	NW_004457654.1	1289399	1291533	R	encoded by transcript ACA1_072770A; transporter, major facilitator subfamily protein	complement(join(1289399..1289454,1289529..1289668,1289756..1289862,1289953..1290144,1290223..1290339,1290404..1290735,1290820..1290872,1290964..1291177,1291308..1291533))	Acanthamoeba castellanii str. Neff	14924626
ACA1_072780	CDS	ACA1_072780	NW_004457654.1	1292747	1295906	R	encoded by transcript ACA1_072780A; uncharacterized protein	complement(join(1292747..1293191,1293350..1293517,1293600..1293916,1294017..1294118,1294226..1294294,1294426..1294498,1294592..1294740,1294849..1295081,1295168..1295243,1295422..1295537,1295654..1295906))	Acanthamoeba castellanii str. Neff	14924627
ACA1_072790	CDS	ACA1_072790	NW_004457654.1	1296178	1297964	R	encoded by transcript ACA1_072790A; hydrolase	complement(join(1296178..1296537,1296646..1296712,1296864..1297013,1297096..1297232,1297320..1297522,1297626..1297669,1297750..1297964))	Acanthamoeba castellanii str. Neff	14924628
ACA1_072800	CDS	ACA1_072800	NW_004457654.1	1298540	1300581	D	encoded by transcript ACA1_072800A; methionine-tRNA ligase	join(1298540..1298689,1298774..1298944,1299028..1299384,1299492..1299860,1299928..1300174,1300247..1300581)	Acanthamoeba castellanii str. Neff	14924629
ACA1_072810	CDS	ACA1_072810	NW_004457654.1	1300762	1302373	D	encoded by transcript ACA1_072810A; Activator of Hsp90 atpase, putative	join(1300762..1300841,1300930..1301123,1301214..1301293,1301386..1301500,1301574..1301668,1301751..1302045,1302195..1302373)	Acanthamoeba castellanii str. Neff	14924630
ACA1_072820	CDS	ACA1_072820	NW_004457654.1	1302521	1304300	R	encoded by transcript ACA1_072820A; alanineglyoxylate aminotransferase	complement(join(1302521..1303017,1303116..1303316,1303421..1304121,1304230..1304300))	Acanthamoeba castellanii str. Neff	14924631
ACA1_072830	CDS	ACA1_072830	NW_004457654.1	1304578	1306145	R	encoded by transcript ACA1_072830A; Catalytic, putative	complement(join(1304578..1304977,1305058..1305203,1305310..1305449,1305631..1305710,1305802..1306145))	Acanthamoeba castellanii str. Neff	14924632
ACA1_072840	CDS	ACA1_072840	NW_004457654.1	1306369	1308386	D	encoded by transcript ACA1_072840A; kynureninase	join(1306369..1306372,1306457..1307010,1307199..1307373,1307494..1307653,1307740..1307869,1307976..1308386)	Acanthamoeba castellanii str. Neff	14924633
ACA1_072860	CDS	ACA1_072860	NW_004457654.1	1314078	1316589	R	encoded by transcript ACA1_072860A; phosphatidate cytidylyltransferase	complement(join(1314078..1314200,1314313..1314521,1314611..1314745,1314823..1314910,1314985..1315174,1315267..1315372,1315444..1315600,1315719..1315888,1315984..1316136,1316230..1316342,1316414..1316589))	Acanthamoeba castellanii str. Neff	14924635
ACA1_072870	CDS	ACA1_072870	NW_004457654.1	1316783	1321008	R	encoded by transcript ACA1_072870A; ATPase, AAA domain containing protein	complement(join(1316783..1316872,1316952..1317093,1317175..1317734,1317812..1317895,1317989..1318090,1318204..1318323,1318450..1318697,1318799..1318937,1319007..1319455,1319560..1319707,1319822..1319927,1320016..1320133,1320255..1320347,1320414..1320558,1320642..1320799,1320882..1321008))	Acanthamoeba castellanii str. Neff	14924636
ACA1_072880	CDS	ACA1_072880	NW_004457654.1	1321435	1323028	R	encoded by transcript ACA1_072880A; uncharacterized protein	complement(join(1321435..1322226,1322296..1322373,1322449..1322634,1322732..1323028))	Acanthamoeba castellanii str. Neff	14924637
ACA1_072890	CDS	ACA1_072890	NW_004457654.1	1324374	1326452	D	encoded by transcript ACA1_072890A; leucine rich repeat domain containing protein	join(1324374..1324753,1324848..1325004,1325085..1326452)	Acanthamoeba castellanii str. Neff	14924638
ACA1_072900	CDS	ACA1_072900	NW_004457654.1	1326687	1329090	R	encoded by transcript ACA1_072900A; RhoGAP domain containing protein	complement(join(1326687..1326824,1326918..1327030,1327088..1327251,1327329..1327525,1327602..1327736,1327800..1327987,1328203..1328412,1328537..1328792,1328878..1329090))	Acanthamoeba castellanii str. Neff	14924639
ACA1_072910	CDS	ACA1_072910	NW_004457654.1	1329397	1330610	D	encoded by transcript ACA1_072910A; carrier superfamily protein	join(1329397..1329401,1329478..1329598,1329715..1330190,1330313..1330610)	Acanthamoeba castellanii str. Neff	14924640
ACA1_072920	CDS	ACA1_072920	NW_004457654.1	1331177	1331538	R	encoded by transcript ACA1_072920A; uncharacterized protein	complement(join(1331177..1331215,1331227..1331312,1331397..1331538))	Acanthamoeba castellanii str. Neff	14924641
ACA1_072930	CDS	ACA1_072930	NW_004457654.1	1336107	1337108	D	encoded by transcript ACA1_072930A; uncharacterized protein	join(1336107..1336149,1336230..1336383,1336452..1336557,1336644..1336724,1336853..1336940,1337047..1337108)	Acanthamoeba castellanii str. Neff	14924642
ACA1_072940	CDS	ACA1_072940	NW_004457654.1	1337151	1339856	D	encoded by transcript ACA1_072940A; serine/threonine kinase	join(1337151..1337458,1337567..1337756,1337853..1337933,1338200..1338242,1338338..1338453,1338531..1338611,1338689..1338826,1338899..1339165,1339238..1339449,1339532..1339607,1339689..1339856)	Acanthamoeba castellanii str. Neff	14924643
ACA1_072950	CDS	ACA1_072950	NW_004457654.1	1340121	1345867	D	encoded by transcript ACA1_072950A; peptidase M16 inactive domain containing protein	join(1340121..1340327,1340404..1340512,1340574..1340628,1340708..1340933,1341034..1341113,1341192..1341301,1341391..1341479,1341618..1341723,1341806..1341966,1342071..1342236,1342315..1342941,1343064..1343691,1343758..1343818,1343895..1344019,1344136..1344302,1344396..1344928,1345004..1345060,1345152..1345329,1345422..1345571,1345674..1345867)	Acanthamoeba castellanii str. Neff	14924644
ACA1_072960	CDS	ACA1_072960	NW_004457654.1	1346019	1347975	D	encoded by transcript ACA1_072960A; uncharacterized protein	join(1346019..1346124,1346196..1346287,1346399..1346497,1346679..1347071,1347200..1347284,1347345..1347446,1347577..1347710,1347778..1347975)	Acanthamoeba castellanii str. Neff	14924645
ACA1_072970	CDS	ACA1_072970	NW_004457654.1	1348555	1348782	R	encoded by transcript ACA1_072970A; uncharacterized protein	complement(1348555..1348782)	Acanthamoeba castellanii str. Neff	14924646
ACA1_072980	CDS	ACA1_072980	NW_004457654.1	1348962	1350225	R	encoded by transcript ACA1_072980A; proteasome endopeptidase complex protein	complement(join(1348962..1349139,1349234..1349346,1349459..1349704,1349793..1349916,1350025..1350107,1350205..1350225))	Acanthamoeba castellanii str. Neff	14924647
ACA1_072990	CDS	ACA1_072990	NW_004457654.1	1350377	1351387	R	encoded by transcript ACA1_072990A; uncharacterized protein	complement(join(1350377..1350480,1350573..1350925,1350997..1351043,1351113..1351204,1351303..1351387))	Acanthamoeba castellanii str. Neff	14924648
ACA1_073000	CDS	ACA1_073000	NW_004457654.1	1352056	1353068	D	encoded by transcript ACA1_073000A; Mis12 domain containing protein	join(1352056..1352541,1352616..1352736,1352813..1352919,1353009..1353068)	Acanthamoeba castellanii str. Neff	14924649
ACA1_073010	CDS	ACA1_073010	NW_004457654.1	1353197	1355359	D	encoded by transcript ACA1_073010A; Fbox domain containing protein	join(1353197..1353355,1353429..1353595,1353673..1353772,1353861..1353935,1354260..1354392,1354485..1354608,1354885..1355001,1355263..1355359)	Acanthamoeba castellanii str. Neff	14924650
ACA1_073020	CDS	ACA1_073020	NW_004457654.1	1355451	1356376	R	encoded by transcript ACA1_073020A; uncharacterized protein	complement(join(1355451..1355571,1355647..1355820,1355898..1356376))	Acanthamoeba castellanii str. Neff	14924651
ACA1_073030	CDS	ACA1_073030	NW_004457654.1	1356513	1357442	R	encoded by transcript ACA1_073030A; uncharacterized protein	complement(join(1356513..1356638,1356774..1356905,1356989..1357091,1357180..1357442))	Acanthamoeba castellanii str. Neff	14924652
ACA1_073040	CDS	ACA1_073040	NW_004457654.1	1357546	1362111	R	encoded by transcript ACA1_073040A; WD domain, G-beta repeat-containing protein	complement(join(1357546..1357890,1357990..1358111,1358190..1359836,1359928..1360090,1360197..1360319,1360412..1360518,1360606..1360996,1361090..1361150,1361241..1361345,1361415..1361467,1361481..1361662,1361745..1362111))	Acanthamoeba castellanii str. Neff	14924653
ACA1_073050	CDS	ACA1_073050	NW_004457654.1	1362270	1363113	D	encoded by transcript ACA1_073050A; Anti-silencing protein, ASF1 family protein	join(1362270..1362378,1362451..1362566,1362634..1363113)	Acanthamoeba castellanii str. Neff	14924654
ACA1_073060	CDS	ACA1_073060	NW_004457654.1	1363435	1364209	R	encoded by transcript ACA1_073060A; uncharacterized protein	complement(join(1363435..1363585,1363673..1363755,1363847..1363978,1364051..1364209))	Acanthamoeba castellanii str. Neff	14924655
ACA1_073070	CDS	ACA1_073070	NW_004457654.1	1364296	1365255	R	encoded by transcript ACA1_073070A; exosome component 3, putative	complement(join(1364296..1364521,1364607..1364755,1364861..1365010,1365079..1365255))	Acanthamoeba castellanii str. Neff	14924656
ACA1_073080	CDS	ACA1_073080	NW_004457654.1	1365453	1366665	D	encoded by transcript ACA1_073080A; 26S proteasome regulatory complex subunit RPN11, putative	join(1365453..1365591,1365665..1365842,1365900..1365981,1366050..1366226,1366306..1366665)	Acanthamoeba castellanii str. Neff	14924657
ACA1_073090	CDS	ACA1_073090	NW_004457654.1	1367634	1369954	D	encoded by transcript ACA1_073090A; WD domain, G-beta repeat-containing protein	join(1367634..1368019,1368092..1368179,1368243..1368375,1368497..1368570,1368650..1368732,1368813..1368910,1369007..1369149,1369234..1369416,1369500..1369566,1369635..1369954)	Acanthamoeba castellanii str. Neff	14924658
ACA1_073100	CDS	ACA1_073100	NW_004457654.1	1370844	1372325	D	encoded by transcript ACA1_073100A; homeobox domain containing protein	join(1370844..1370905,1371242..1372325)	Acanthamoeba castellanii str. Neff	14924659
ACA1_073110	CDS	ACA1_073110	NW_004457654.1	1372547	1373442	R	encoded by transcript ACA1_073110A; uncharacterized protein	complement(join(1372547..1372745,1372810..1372877,1372940..1373010,1373066..1373170,1373225..1373318,1373371..>1373442))	Acanthamoeba castellanii str. Neff	14924660
ACA1_073120	CDS	ACA1_073120	NW_004457654.1	1373743	1374845	R	encoded by transcript ACA1_073120A; Proteintyrosine phosphatase	complement(join(1373743..1374354,1374419..1374743,1374814..1374845))	Acanthamoeba castellanii str. Neff	14924661
ACA1_073230	CDS	ACA1_073230	NW_004457654.1	1375439	1377292	R	encoded by transcript ACA1_073230A; epoxide hydrolase	complement(join(<1375439..1375556,1375654..1375727,1375800..1375871,1375983..1376077,1376162..1376309,1376416..1376453,1376537..1376617,1376707..1376835,1376902..1377131,1377189..1377292))	Acanthamoeba castellanii str. Neff	14924662
ACA1_073240	CDS	ACA1_073240	NW_004457654.1	1377456	1381331	R	encoded by transcript ACA1_073240A; uncharacterized protein	complement(join(1377456..1377956,1378027..1378127,1378168..1378357,1378436..1378546,1378627..1378734,1378835..1378984,1379056..1379153,1379228..1379324,1379416..1379658,1379749..1379817,1379906..1380051,1380130..1380283,1380352..1380474,1380598..1380650,1380744..1380785,1380877..1380973,1381044..1381331))	Acanthamoeba castellanii str. Neff	14924663
ACA1_073250	CDS	ACA1_073250	NW_004457654.1	1381720	1382974	R	encoded by transcript ACA1_073250A; uncharacterized protein	complement(join(1381720..1381723,1381809..1381976,1382099..1382122,1382203..1382736,1382820..1382974))	Acanthamoeba castellanii str. Neff	14924664
ACA1_073260	CDS	ACA1_073260	NW_004457654.1	1383301	1384227	R	encoded by transcript ACA1_073260A; uncharacterized protein	complement(join(1383301..1383317,1383392..1383558,1383649..1383846,1383920..1384227))	Acanthamoeba castellanii str. Neff	14924665
ACA1_073270	CDS	ACA1_073270	NW_004457654.1	1385465	1386626	D	encoded by transcript ACA1_073270A; THO complex 3 family protein	join(1385465..1385579,1385639..1385730,1385816..1385884,1385960..1386117,1386201..1386366,1386459..1386626)	Acanthamoeba castellanii str. Neff	14924666
ACA1_073280	CDS	ACA1_073280	NW_004457654.1	1386895	1388262	D	encoded by transcript ACA1_073280A; uncharacterized protein	join(1386895..1386941,1387052..1387092,1387154..1387315,1387386..1387447,1387526..1387607,1387734..1387935,1388013..1388262)	Acanthamoeba castellanii str. Neff	14924667
ACA1_073290	CDS	ACA1_073290	NW_004457654.1	1388317	1389390	R	encoded by transcript ACA1_073290A; EF hand domain containing protein	complement(join(1388317..1388397,1388467..1388583,1388696..1388772,1388854..1388927,1389015..1389127,1389214..1389263,1389339..1389390))	Acanthamoeba castellanii str. Neff	14924668
ACA1_073300	CDS	ACA1_073300	NW_004457654.1	1389470	1390663	R	encoded by transcript ACA1_073300A; phytochelatin synthase, putative	complement(join(1389470..1389490,1389602..1389685,1389781..1390006,1390094..1390373,1390462..1390663))	Acanthamoeba castellanii str. Neff	14924669
ACA1_073310	CDS	ACA1_073310	NW_004457654.1	1391704	1393139	D	encoded by transcript ACA1_073310A; DHHC zinc finger domain containing protein	join(1391704..1391823,1391924..1392191,1392435..1392547,1392619..1392825,1392918..1393139)	Acanthamoeba castellanii str. Neff	14924670
ACA1_073320	CDS	ACA1_073320	NW_004457654.1	1393244	1394516	D	encoded by transcript ACA1_073320A; tyrosine phosphatase, putative	join(1393244..1393286,1393393..1393453,1393544..1393673,1393755..1393892,1393987..1394081,1394158..1394336,1394437..1394516)	Acanthamoeba castellanii str. Neff	14924671
ACA1_073330	CDS	ACA1_073330	NW_004457654.1	1394676	1395230	R	encoded by transcript ACA1_073330A; uncharacterized protein	complement(join(1394676..1394732,1394817..1395230))	Acanthamoeba castellanii str. Neff	14924672
ACA1_073340	CDS	ACA1_073340	NW_004457654.1	1395743	1397103	R	encoded by transcript ACA1_073340A; permease, putative	complement(join(1395743..1395943,1396015..1396107,1396178..1396409,1396473..1396719,1396788..1397103))	Acanthamoeba castellanii str. Neff	14924673
ACA1_073350	CDS	ACA1_073350	NW_004457654.1	1397292	1398935	D	encoded by transcript ACA1_073350A; AAR2 protein	join(1397292..1397461,1397572..1397650,1397741..1397819,1397903..1398265,1398355..1398513,1398603..1398691,1398783..1398935)	Acanthamoeba castellanii str. Neff	14924674
ACA1_073360	CDS	ACA1_073360	NW_004457654.1	1399294	1400808	D	encoded by transcript ACA1_073360A; RNA recognition motif domain containing protein	join(1399294..1399332,1399458..1399518,1399631..1400808)	Acanthamoeba castellanii str. Neff	14924675
ACA1_073370	CDS	ACA1_073370	NW_004457654.1	1401203	1402154	D	encoded by transcript ACA1_073370A; Bax inhibitor 1, putative	join(1401203..1401261,1401353..1401625,1401700..1402001,1402084..1402154)	Acanthamoeba castellanii str. Neff	14924676
ACA1_073380	CDS	ACA1_073380	NW_004457654.1	1402323	1406116	R	encoded by transcript ACA1_073380A; uncharacterized protein	complement(join(1402323..1402478,1402605..1403098,1403234..1403382,1403486..1403562,1403680..1403883,1403981..1404072,1404189..1404371,1404485..1404678,1404812..1404878,1404995..1405123,1405265..1405420,1405505..1405617,1405701..1405752,1405836..1405912,1406049..1406116))	Acanthamoeba castellanii str. Neff	14924677
ACA1_073390	CDS	ACA1_073390	NW_004457654.1	1406359	1408861	D	encoded by transcript ACA1_073390A; uncharacterized protein	join(1406359..1406652,1406761..1406786,1406908..1407043,1407146..1407210,1407336..1407453,1407539..1407693,1407796..1407927,1408013..1408116,1408206..1408282,1408363..1408426,1408521..1408654,1408721..1408861)	Acanthamoeba castellanii str. Neff	14924678
ACA1_073400	CDS	ACA1_073400	NW_004457654.1	1409148	1410310	D	encoded by transcript ACA1_073400A; uncharacterized protein	join(1409148..1409700,1409799..1410310)	Acanthamoeba castellanii str. Neff	14924679
ACA1_073410	CDS	ACA1_073410	NW_004457654.1	1410403	1412879	R	encoded by transcript ACA1_073410A; uncharacterized protein	complement(join(1410403..1410498,1410553..1410782,1410879..1411008,1411098..1411258,1411348..1411580,1411667..1412106,1412205..1412452,1412532..1412635,1412752..1412879))	Acanthamoeba castellanii str. Neff	14924680
ACA1_073420	CDS	ACA1_073420	NW_004457654.1	1413101	1415534	R	encoded by transcript ACA1_073420A; chaperone protein DnaJ, putative	complement(join(1413101..1413135,1413224..1413340,1413431..1413598,1413679..1413806,1413888..1414043,1414116..1414342,1414414..1414591,1414670..1414860,1415007..1415150,1415235..1415534))	Acanthamoeba castellanii str. Neff	14924681
ACA1_073430	CDS	ACA1_073430	NW_004457654.1	1416099	1417828	D	encoded by transcript ACA1_073430A; sterol C22 desaturase -like, putative	join(1416099..1416587,1416833..1417828)	Acanthamoeba castellanii str. Neff	14924682
ACA1_073440	CDS	ACA1_073440	NW_004457654.1	1418248	1420538	D	encoded by transcript ACA1_073440A; transporter, major facilitator subfamily protein	join(1418248..1418405,1418513..1418673,1418753..1418838,1418923..1419037,1419129..1419224,1419296..1419519,1419613..1419803,1419937..1420076,1420150..1420538)	Acanthamoeba castellanii str. Neff	14924683
ACA1_073450	CDS	ACA1_073450	NW_004457654.1	1420654	1422163	D	encoded by transcript ACA1_073450A; uncharacterized protein	join(1420654..1420926,1421071..1421342,1421425..1421935,1422014..1422163)	Acanthamoeba castellanii str. Neff	14924684
ACA1_073460	CDS	ACA1_073460	NW_004457654.1	1422790	1425285	R	encoded by transcript ACA1_073460A; ABC exporter, ATPbinding protein	complement(join(1422790..1423073,1423178..1423343,1423457..1424475,1424721..1425285))	Acanthamoeba castellanii str. Neff	14924685
ACA1_073470	CDS	ACA1_073470	NW_004457654.1	1425555	1426391	D	encoded by transcript ACA1_073470A; SH3 domain containing protein	1425555..1426391	Acanthamoeba castellanii str. Neff	14924686
ACA1_073480	CDS	ACA1_073480	NW_004457654.1	1426579	1427313	R	encoded by transcript ACA1_073480A; uncharacterized protein	complement(1426579..1427313)	Acanthamoeba castellanii str. Neff	14924687
ACA1_073490	CDS	ACA1_073490	NW_004457654.1	1427400	1429663	R	encoded by transcript ACA1_073490A; WD repeatcontaining protein	complement(join(1427400..1427594,1427684..1427826,1427906..1427966,1428067..1428195,1428276..1428395,1428471..1428668,1428735..1428891,1428975..1429108,1429204..1429254,1429347..1429409,1429610..1429663))	Acanthamoeba castellanii str. Neff	14924688
ACA1_073500	CDS	ACA1_073500	NW_004457654.1	1430012	1432186	D	encoded by transcript ACA1_073500A; clathrin coat assembly protein AP50, putative	join(1430012..1430066,1430177..1430256,1430346..1430549,1430655..1430915,1431018..1431132,1431228..1431436,1431517..1431593,1431708..1431819,1431889..1431944,1432045..1432186)	Acanthamoeba castellanii str. Neff	14924689
ACA1_073510	CDS	ACA1_073510	NW_004457654.1	1432346	1433500	R	encoded by transcript ACA1_073510A; oxidoreductase domain containing protein	complement(join(1432346..1432606,1432690..1432814,1432918..1433086,1433213..1433500))	Acanthamoeba castellanii str. Neff	14924690
ACA1_073520	CDS	ACA1_073520	NW_004457654.1	1433783	1436494	D	encoded by transcript ACA1_073520A; uncharacterized protein	join(1433783..1433804,1433894..1433996,1434137..1434223,1434383..1434503,1434596..1434658,1434774..1434880,1434998..1435127,1435267..1435485,1435572..1435692,1435811..1435974,1436057..1436126,1436224..1436273,1436357..1436494)	Acanthamoeba castellanii str. Neff	14924691
ACA1_073530	CDS	ACA1_073530	NW_004457654.1	1437734	1439069	R	encoded by transcript ACA1_073530A; uncharacterized protein	complement(join(1437734..1437975,1438046..1438130,1438195..1438290,1438360..1438473,1438575..1438751,1438821..1439069))	Acanthamoeba castellanii str. Neff	14924692
ACA1_073540	CDS	ACA1_073540	NW_004457654.1	1440531	1441467	D	encoded by transcript ACA1_073540A; uncharacterized protein	join(1440531..1440740,1440758..1440940,1441163..1441309,1441417..1441467)	Acanthamoeba castellanii str. Neff	14924693
ACA1_073550	CDS	ACA1_073550	NW_004457654.1	1446856	1447314	D	encoded by transcript ACA1_073550A; uncharacterized protein	join(1446856..1446915,1446940..1447314)	Acanthamoeba castellanii str. Neff	14924694
ACA1_073560	CDS	ACA1_073560	NW_004457654.1	1447794	1448219	R	encoded by transcript ACA1_073560A; uncharacterized protein	complement(join(1447794..1447955,1448130..1448219))	Acanthamoeba castellanii str. Neff	14924695
ACA1_073570	CDS	ACA1_073570	NW_004457654.1	1451469	1452622	R	encoded by transcript ACA1_073570A; uncharacterized protein	complement(join(1451469..1451478,1451592..1451981,1452410..1452519,1452602..1452622))	Acanthamoeba castellanii str. Neff	14924696
ACA1_073580	CDS	ACA1_073580	NW_004457654.1	1453598	1454321	D	encoded by transcript ACA1_073580A; uncharacterized protein	join(1453598..1453640,1453832..1453905,1454094..1454163,1454266..1454321)	Acanthamoeba castellanii str. Neff	14924697
ACA1_073600	CDS	ACA1_073600	NW_004457654.1	1457229	1457694	R	encoded by transcript ACA1_073600A; uncharacterized protein	complement(join(1457229..1457296,1457325..1457694))	Acanthamoeba castellanii str. Neff	14924699
ACA1_073610	CDS	ACA1_073610	NW_004457654.1	1459124	1459711	D	encoded by transcript ACA1_073610A; copialike pol polyprotein	join(1459124..1459447,1459469..>1459711)	Acanthamoeba castellanii str. Neff	14924700
ACA1_073620	CDS	ACA1_073620	NW_004457654.1	1460057	1461370	D	encoded by transcript ACA1_073620A; integrase core domain containing protein	1460057..1461370	Acanthamoeba castellanii str. Neff	14924701
ACA1_073630	CDS	ACA1_073630	NW_004457654.1	1461491	1462834	D	encoded by transcript ACA1_073630A; Reverse transcriptase	1461491..1462834	Acanthamoeba castellanii str. Neff	14924702
ACA1_073640	CDS	ACA1_073640	NW_004457654.1	1463726	1464526	R	encoded by transcript ACA1_073640A; uncharacterized protein	complement(1463726..>1464526)	Acanthamoeba castellanii str. Neff	14924703
ACA1_073650	CDS	ACA1_073650	NW_004457654.1	1465000	1466238	R	encoded by transcript ACA1_073650A; uncharacterized protein	complement(join(1465000..1465023,1465066..1465455,1465523..1465963,1466045..1466201,1466216..1466238))	Acanthamoeba castellanii str. Neff	14924704
ACA1_073670	CDS	ACA1_073670	NW_004457654.1	1469508	1470368	R	encoded by transcript ACA1_073670A; Serine/threonine kinase	complement(join(1469508..1469597,1469652..1469764,1469836..1469917,1470030..1470191,1470297..1470368))	Acanthamoeba castellanii str. Neff	14924706
ACA1_073680	CDS	ACA1_073680	NW_004457654.1	1471099	1472058	D	encoded by transcript ACA1_073680A; uncharacterized protein	join(1471099..1471576,1471913..1472058)	Acanthamoeba castellanii str. Neff	14924707
ACA1_073690	CDS	ACA1_073690	NW_004457654.1	1472960	1473723	R	encoded by transcript ACA1_073690A; cupin superfamily protein	complement(join(1472960..1473220,1473337..1473582,1473652..1473723))	Acanthamoeba castellanii str. Neff	14924708
ACA1_073710	CDS	ACA1_073710	NW_004457654.1	1479740	1480902	R	encoded by transcript ACA1_073710A; EGFlike domain containing protein	complement(join(1479740..1480275,1480355..1480465,1480528..1480616,1480700..1480902))	Acanthamoeba castellanii str. Neff	14924710
ACA1_073720	CDS	ACA1_073720	NW_004457654.1	1486221	1486679	D	encoded by transcript ACA1_073720A; uncharacterized protein	join(1486221..1486316,1486488..1486679)	Acanthamoeba castellanii str. Neff	14924711
ACA1_073730	CDS	ACA1_073730	NW_004457654.1	1489336	1489852	R	encoded by transcript ACA1_073730A; uncharacterized protein	complement(join(1489336..1489653,1489683..1489746,1489800..1489852))	Acanthamoeba castellanii str. Neff	14924712
ACA1_012250	CDS	ACA1_012250	NW_004457653.1	797	2006	R	encoded by transcript ACA1_012250A; protein kinase, putative	complement(join(797..948,1032..1371,1467..2006))	Acanthamoeba castellanii str. Neff	14924159
ACA1_012260	CDS	ACA1_012260	NW_004457653.1	2508	2998	D	encoded by transcript ACA1_012260A; uncharacterized protein	join(2508..2627,2699..2805,2884..2998)	Acanthamoeba castellanii str. Neff	14924151
ACA1_012270	CDS	ACA1_012270	NW_004457653.1	3662	6000	D	encoded by transcript ACA1_012270A; aldehyde dehydrogenase	join(3662..3770,3919..4001,4138..4234,4353..4432,4506..4706,4752..4915,5003..5096,5159..5322,5393..5463,5553..5593,5654..5804,5894..6000)	Acanthamoeba castellanii str. Neff	14924152
ACA1_012280	CDS	ACA1_012280	NW_004457653.1	6680	8945	D	encoded by transcript ACA1_012280A; cobalamin synthesis protein/P47K	join(6680..6761,6845..6897,6979..7165,7294..7431,7511..7630,7662..7792,7897..8074,8135..8343,8417..8494,8584..8724,8820..8945)	Acanthamoeba castellanii str. Neff	14924153
ACA1_012290	CDS	ACA1_012290	NW_004457653.1	9092	9641	D	encoded by transcript ACA1_012290A; uncharacterized protein	join(9092..9239,9340..9399,9508..9641)	Acanthamoeba castellanii str. Neff	14924154
ACA1_012300	CDS	ACA1_012300	NW_004457653.1	9738	10745	R	encoded by transcript ACA1_012300A; uncharacterized protein	complement(join(9738..10157,10279..10372,10446..10522,10590..10745))	Acanthamoeba castellanii str. Neff	14924155
ACA1_012310	CDS	ACA1_012310	NW_004457653.1	11044	11875	D	encoded by transcript ACA1_012310A; biogenesis of lysosome related family protein	join(11044..11139,11208..11295,11374..11493,11578..11735,11810..11875)	Acanthamoeba castellanii str. Neff	14924156
ACA1_012330	CDS	ACA1_012330	NW_004457653.1	15371	19848	D	encoded by transcript ACA1_012330A; WD domain, G-beta repeat-containing protein	join(15371..15837,15920..16098,16188..16392,16484..16634,16720..16931,17021..17281,17376..17455,17538..18556,18688..19290,19376..19447,19540..>19848)	Acanthamoeba castellanii str. Neff	14924158
ACA1_356910	CDS	ACA1_356910	NW_004457652.1	61	385	D	encoded by transcript ACA1_356910A; uncharacterized protein	join(61..84,161..385)	Acanthamoeba castellanii str. Neff	14924150
ACA1_356920	CDS	ACA1_356920	NW_004457652.1	628	2870	D	encoded by transcript ACA1_356920A; hydrolase, NUDIX domain containing protein	join(628..679,753..893,1202..1258,1377..1432,1546..1659,1757..1895,2033..2186,2264..2370,2540..2650,2722..2870)	Acanthamoeba castellanii str. Neff	14924134
ACA1_356930	CDS	ACA1_356930	NW_004457652.1	3669	6544	R	encoded by transcript ACA1_356930A; uncharacterized protein	complement(join(3669..3812,3979..4105,4184..4542,6089..6544))	Acanthamoeba castellanii str. Neff	14924137
ACA1_357040	CDS	ACA1_357040	NW_004457652.1	6698	7169	D	encoded by transcript ACA1_357040A; uncharacterized protein	join(<6698..6959,7033..7169)	Acanthamoeba castellanii str. Neff	14924138
ACA1_357050	CDS	ACA1_357050	NW_004457652.1	7424	8390	R	encoded by transcript ACA1_357050A; DJ1/PfpI superfamily protein	complement(join(7424..7888,8011..8154,8168..8239,8268..8390))	Acanthamoeba castellanii str. Neff	14924139
ACA1_357160	CDS	ACA1_357160	NW_004457652.1	8798	12390	R	encoded by transcript ACA1_357160A; actin subfamily protein	complement(join(8798..8924,9212..9259,9376..9458,9552..9679,9915..10002,10086..10216,10308..10478,10575..10643,10756..10874,11018..11126,11239..11367,11472..11535,11677..11827,11944..11990,12058..12227,12345..12390))	Acanthamoeba castellanii str. Neff	14924140
ACA1_357470	CDS	ACA1_357470	NW_004457652.1	13256	14073	D	encoded by transcript ACA1_357470A; uncharacterized protein	join(13256..13484,13743..13793,13934..14073)	Acanthamoeba castellanii str. Neff	14924141
ACA1_357480	CDS	ACA1_357480	NW_004457652.1	14314	16472	D	encoded by transcript ACA1_357480A; F-box domain containing protein	join(14314..14723,14811..15168,15278..15317,15430..15627,15764..15853,15931..16056,16141..16271,16338..16472)	Acanthamoeba castellanii str. Neff	14924142
ACA1_357490	CDS	ACA1_357490	NW_004457652.1	16476	17339	R	encoded by transcript ACA1_357490A; Erg28 family protein	complement(join(16476..16691,16818..16952,17061..17125,17213..17339))	Acanthamoeba castellanii str. Neff	14924143
ACA1_357500	CDS	ACA1_357500	NW_004457652.1	17669	18867	D	encoded by transcript ACA1_357500A; uncharacterized protein	join(17669..17952,18081..18530,18738..18867)	Acanthamoeba castellanii str. Neff	14924144
ACA1_357610	CDS	ACA1_357610	NW_004457652.1	20247	23295	R	encoded by transcript ACA1_357610A; RasGEF domain containing protein	complement(join(20247..20447,20605..20776,20916..21137,21221..21323,21711..21832,21933..21979,22091..22229,22394..22500,22577..22944,23196..23295))	Acanthamoeba castellanii str. Neff	14924145
ACA1_357720	CDS	ACA1_357720	NW_004457652.1	23174	23530	D	encoded by transcript ACA1_357720A; uncharacterized protein	23174..23530	Acanthamoeba castellanii str. Neff	14924147
ACA1_357730	CDS	ACA1_357730	NW_004457652.1	23680	23943	R	encoded by transcript ACA1_357730A; uncharacterized protein	complement(23680..23943)	Acanthamoeba castellanii str. Neff	14924146
ACA1_357840	CDS	ACA1_357840	NW_004457652.1	25300	26019	R	encoded by transcript ACA1_357840A; uncharacterized protein	complement(join(25300..25317,25439..25534,25660..25737,25879..26019))	Acanthamoeba castellanii str. Neff	14924148
ACA1_357950	CDS	ACA1_357950	NW_004457652.1	27751	29286	D	encoded by transcript ACA1_357950A; PhytanoylCoA dioxygenase (PhyH) superfamily protein	join(27751..27880,27928..28019,28082..28191,28288..28477,28545..28626,28706..28857,28977..28995,29079..29167,29239..29286)	Acanthamoeba castellanii str. Neff	14924149
ACA1_357960	CDS	ACA1_357960	NW_004457652.1	29607	31230	D	encoded by transcript ACA1_357960A; alternative oxidase isoform A, putative	join(29607..30001,30115..30252,30345..30525,30627..30766,30869..31010,31102..31230)	Acanthamoeba castellanii str. Neff	14924135
ACA1_358070	CDS	ACA1_358070	NW_004457652.1	35531	36172	R	encoded by transcript ACA1_358070A; uncharacterized protein	complement(join(35531..35635,35729..35828,35892..>36172))	Acanthamoeba castellanii str. Neff	14924136
ACA1_342020	CDS	ACA1_342020	NW_004457651.1	196	1657	R	encoded by transcript ACA1_342020A; uncharacterized protein	complement(join(196..1103,1477..1657))	Acanthamoeba castellanii str. Neff	14924133
ACA1_342030	CDS	ACA1_342030	NW_004457651.1	2296	3002	D	encoded by transcript ACA1_342030A; uncharacterized protein	join(<2296..2392,2403..2492,2530..3002)	Acanthamoeba castellanii str. Neff	14924112
ACA1_342040	CDS	ACA1_342040	NW_004457651.1	3099	3907	R	encoded by transcript ACA1_342040A; uncharacterized protein	complement(join(3099..3247,3425..3555,3656..3782,3886..3907))	Acanthamoeba castellanii str. Neff	14924113
ACA1_342050	CDS	ACA1_342050	NW_004457651.1	3989	5019	R	encoded by transcript ACA1_342050A; uncharacterized protein	complement(join(<3989..4413,4434..5019))	Acanthamoeba castellanii str. Neff	14924114
ACA1_342160	CDS	ACA1_342160	NW_004457651.1	8467	9250	D	encoded by transcript ACA1_342160A; uncharacterized protein	join(8467..8551,8686..8727,9195..9250)	Acanthamoeba castellanii str. Neff	14924115
ACA1_342170	CDS	ACA1_342170	NW_004457651.1	10145	10612	D	encoded by transcript ACA1_342170A; gagpol polyprotein	join(10145..10326,10363..10612)	Acanthamoeba castellanii str. Neff	14924116
ACA1_342180	CDS	ACA1_342180	NW_004457651.1	10785	11696	D	encoded by transcript ACA1_342180A; polyprotein	join(10785..10823,10843..11168,11310..11394,11439..11696)	Acanthamoeba castellanii str. Neff	14924117
ACA1_342290	CDS	ACA1_342290	NW_004457651.1	13083	14596	D	encoded by transcript ACA1_342290A; uncharacterized protein	join(13083..13322,13392..13486,13512..13782,13879..14041,14124..14596)	Acanthamoeba castellanii str. Neff	14924118
ACA1_342400	CDS	ACA1_342400	NW_004457651.1	16275	18702	D	encoded by transcript ACA1_342400A; Tubulin/FtsZ family, GTPase domain containing protein	join(<16275..16373,16389..16611,16719..16883,16974..17079,17184..17341,17417..17539,17636..17643,17790..17855,17937..18053,18275..18495,18585..18702)	Acanthamoeba castellanii str. Neff	14924119
ACA1_342510	CDS	ACA1_342510	NW_004457651.1	24031	26013	R	encoded by transcript ACA1_342510A; glucuronidase, beta, putative	complement(join(24031..24036,24099..24203,24280..24360,24438..24583,24660..24833,24869..24899,24972..25060,25149..25347,25418..25563,25644..25719,25807..25911,25981..26013))	Acanthamoeba castellanii str. Neff	14924120
ACA1_342520	CDS	ACA1_342520	NW_004457651.1	26171	26895	R	encoded by transcript ACA1_342520A; Suppressor/Enhancer of Lin12 family member (sel-10), putative	complement(join(26171..26314,26409..26499,26570..26715,26866..26895))	Acanthamoeba castellanii str. Neff	14924121
ACA1_342530	CDS	ACA1_342530	NW_004457651.1	27887	28512	D	encoded by transcript ACA1_342530A; uncharacterized protein	join(27887..27971,28210..28263,28355..28512)	Acanthamoeba castellanii str. Neff	14924122
ACA1_342840	CDS	ACA1_342840	NW_004457651.1	35840	36052	D	encoded by transcript ACA1_342840A; uncharacterized protein	35840..36052	Acanthamoeba castellanii str. Neff	14924123
ACA1_342850	CDS	ACA1_342850	NW_004457651.1	37282	39018	R	encoded by transcript ACA1_342850A; FAD-dependent oxidoreductase, putative	complement(join(37282..38152,38241..38667,38723..38842,38976..39018))	Acanthamoeba castellanii str. Neff	14924124
ACA1_342860	CDS	ACA1_342860	NW_004457651.1	39461	41440	D	encoded by transcript ACA1_342860A; pyoverdine/dityrosine biosynthesis protein	join(39461..39797,39852..40240,40345..40673,40714..41440)	Acanthamoeba castellanii str. Neff	14924125
ACA1_342870	CDS	ACA1_342870	NW_004457651.1	41803	44059	R	encoded by transcript ACA1_342870A; transporter, major facilitator subfamily protein	complement(join(41803..42360,42498..42889,42981..43068,43281..43331,43470..43627,43708..44059))	Acanthamoeba castellanii str. Neff	14924126
ACA1_342880	CDS	ACA1_342880	NW_004457651.1	45650	46395	R	encoded by transcript ACA1_342880A; uncharacterized protein	complement(join(45650..45748,45967..46395))	Acanthamoeba castellanii str. Neff	14924127
ACA1_342890	CDS	ACA1_342890	NW_004457651.1	46667	47233	R	encoded by transcript ACA1_342890A; uncharacterized protein	complement(join(46667..46704,46835..46958,46989..47056,47155..47233))	Acanthamoeba castellanii str. Neff	14924128
ACA1_342900	CDS	ACA1_342900	NW_004457651.1	47263	47771	R	encoded by transcript ACA1_342900A; uncharacterized protein	complement(join(47263..47376,47631..47771))	Acanthamoeba castellanii str. Neff	14924129
ACA1_342910	CDS	ACA1_342910	NW_004457651.1	48768	49640	R	encoded by transcript ACA1_342910A; MLKrelated kinase	complement(join(48768..49022,49034..49116,49225..49378,49602..49640))	Acanthamoeba castellanii str. Neff	14924130
ACA1_342920	CDS	ACA1_342920	NW_004457651.1	50047	55032	R	encoded by transcript ACA1_342920A; serine/threonine protein kinase, putative	complement(join(50047..50396,50488..51355,51505..52062,52152..52219,52303..52369,52445..52603,52700..54822,54969..55032))	Acanthamoeba castellanii str. Neff	14924131
ACA1_342930	CDS	ACA1_342930	NW_004457651.1	55388	57482	D	encoded by transcript ACA1_342930A; uncharacterized protein	join(55388..55420,55672..55795,56379..56583,56662..56719,57014..57153,57443..57482)	Acanthamoeba castellanii str. Neff	14924132
ACA1_249760	CDS	ACA1_249760	NW_004457650.1	5657	6636	D	encoded by transcript ACA1_249760A; uncharacterized protein	join(5657..5738,5845..6002,6172..6636)	Acanthamoeba castellanii str. Neff	14924111
ACA1_249770	CDS	ACA1_249770	NW_004457650.1	8727	12152	R	encoded by transcript ACA1_249770A; uncharacterized protein	complement(join(8727..9133,9208..9325,9439..9578,11034..11123,11236..11635,11815..12027,12120..12152))	Acanthamoeba castellanii str. Neff	14924096
ACA1_249880	CDS	ACA1_249880	NW_004457650.1	12434	14015	D	encoded by transcript ACA1_249880A; uncharacterized protein	join(12434..13145,13239..13396,13481..13572,13671..13837,13912..14015)	Acanthamoeba castellanii str. Neff	14924097
ACA1_249890	CDS	ACA1_249890	NW_004457650.1	14113	16302	R	encoded by transcript ACA1_249890A; uncharacterized protein	complement(join(14113..14207,14306..14419,14500..14576,14683..14774,14859..14947,15024..15102,15369..15476,15517..15721,15792..15929,16000..16109,16237..16302))	Acanthamoeba castellanii str. Neff	14924098
ACA1_249900	CDS	ACA1_249900	NW_004457650.1	18737	20772	R	encoded by transcript ACA1_249900A; uncharacterized protein	complement(join(18737..18964,19127..19259,19347..19402,19464..19541,19590..19679,19752..19837,20259..20320,20408..20772))	Acanthamoeba castellanii str. Neff	14924099
ACA1_249910	CDS	ACA1_249910	NW_004457650.1	21761	24912	R	encoded by transcript ACA1_249910A; EGF family domain containing protein	complement(join(21761..21782,21809..21933,22047..22154,22237..22481,22572..22712,22764..22886,22984..23094,23172..23280,23704..23789,23883..23990,24080..24152,24481..24544,24626..24747,24802..24912))	Acanthamoeba castellanii str. Neff	14924100
ACA1_250020	CDS	ACA1_250020	NW_004457650.1	25822	26391	R	encoded by transcript ACA1_250020A; uncharacterized protein	complement(25822..26391)	Acanthamoeba castellanii str. Neff	14924101
ACA1_250030	CDS	ACA1_250030	NW_004457650.1	26468	28038	R	encoded by transcript ACA1_250030A; uncharacterized protein	complement(join(26468..26491,26515..26625,26711..26831,26923..26975,27099..27167,27234..27299,27397..28038))	Acanthamoeba castellanii str. Neff	14924102
ACA1_250040	CDS	ACA1_250040	NW_004457650.1	28273	30028	R	encoded by transcript ACA1_250040A; oxidoreductase, 2OGFe(II) oxygenase family protein	complement(join(28273..28394,28504..28618,28705..28802,28890..28987,29080..29248,29334..29436,29501..29628,29790..29957,29971..30028))	Acanthamoeba castellanii str. Neff	14924103
ACA1_250050	CDS	ACA1_250050	NW_004457650.1	30400	31521	R	encoded by transcript ACA1_250050A; Leucine-rich repeat-containing protein	complement(join(30400..30667,30775..30850,30927..31009,31097..31226,31319..31358,31419..31499,31513..31521))	Acanthamoeba castellanii str. Neff	14924104
ACA1_250160	CDS	ACA1_250160	NW_004457650.1	33048	33383	D	encoded by transcript ACA1_250160A; uncharacterized protein	33048..33383	Acanthamoeba castellanii str. Neff	14924105
ACA1_250170	CDS	ACA1_250170	NW_004457650.1	33477	33732	R	encoded by transcript ACA1_250170A; uncharacterized protein	complement(join(33477..33613,33636..33732))	Acanthamoeba castellanii str. Neff	14924106
ACA1_250180	CDS	ACA1_250180	NW_004457650.1	34162	36780	R	encoded by transcript ACA1_250180A; RhoGEF domain containing protein	complement(join(34162..34450,34539..34616,34693..34780,34902..35077,35155..35339,35424..35588,35687..35782,35886..35993,36108..36206,36321..36436,36576..36780))	Acanthamoeba castellanii str. Neff	14924107
ACA1_250290	CDS	ACA1_250290	NW_004457650.1	41285	43179	R	encoded by transcript ACA1_250290A; uncharacterized protein	complement(join(41285..41442,41603..41952,42046..42282,42299..43179))	Acanthamoeba castellanii str. Neff	14924108
ACA1_250300	CDS	ACA1_250300	NW_004457650.1	43725	45519	D	encoded by transcript ACA1_250300A; carrier superfamily protein	join(43725..43806,43881..43942,44027..44136,44210..44272,44361..44454,44551..44689,44867..44936,45033..45184,45262..45319,45489..45519)	Acanthamoeba castellanii str. Neff	14924109
ACA1_250310	CDS	ACA1_250310	NW_004457650.1	45910	48429	R	encoded by transcript ACA1_250310A; serine/threonine protein kinase	complement(join(45910..46317,46383..46588,46673..47140,47205..48160,48227..>48429))	Acanthamoeba castellanii str. Neff	14924110
ACA1_043770	CDS	ACA1_043770	NW_004457649.1	118	1686	R	encoded by transcript ACA1_043770A; uncharacterized protein	complement(join(<118..294,439..566,652..699,780..794,954..1686))	Acanthamoeba castellanii str. Neff	14924095
ACA1_043880	CDS	ACA1_043880	NW_004457649.1	6669	8247	D	encoded by transcript ACA1_043880A; Dgalactarate dehydratase/Altronate hydrolase-like protein	join(6669..6753,6824..6849,6992..7082,7180..7712,7819..7852,7937..8247)	Acanthamoeba castellanii str. Neff	14924090
ACA1_043890	CDS	ACA1_043890	NW_004457649.1	8525	9139	D	encoded by transcript ACA1_043890A; FAD binding domain containing protein	join(8525..8567,8666..9077,9106..9139)	Acanthamoeba castellanii str. Neff	14924086
ACA1_044000	CDS	ACA1_044000	NW_004457649.1	14149	14989	D	encoded by transcript ACA1_044000A; PHDfinger domain containing protein	join(14149..14185,14320..14738,14948..14989)	Acanthamoeba castellanii str. Neff	14924087
ACA1_044110	CDS	ACA1_044110	NW_004457649.1	16744	17229	D	encoded by transcript ACA1_044110A; uncharacterized protein	join(16744..17045,17064..17229)	Acanthamoeba castellanii str. Neff	14924088
ACA1_044120	CDS	ACA1_044120	NW_004457649.1	18527	19155	R	encoded by transcript ACA1_044120A; uncharacterized protein	complement(join(18527..18634,18789..18948,19085..19155))	Acanthamoeba castellanii str. Neff	14924089
ACA1_044130	CDS	ACA1_044130	NW_004457649.1	19454	20673	D	encoded by transcript ACA1_044130A; uncharacterized protein	join(19454..19648,19745..19957,20358..20548,20577..20673)	Acanthamoeba castellanii str. Neff	14924091
ACA1_044240	CDS	ACA1_044240	NW_004457649.1	20988	21314	R	encoded by transcript ACA1_044240A; uncharacterized protein	complement(join(20988..21155,21189..21314))	Acanthamoeba castellanii str. Neff	14924092
ACA1_044250	CDS	ACA1_044250	NW_004457649.1	21603	21818	D	encoded by transcript ACA1_044250A; uncharacterized protein	21603..21818	Acanthamoeba castellanii str. Neff	14924093
ACA1_044260	CDS	ACA1_044260	NW_004457649.1	22956	23177	R	encoded by transcript ACA1_044260A; uncharacterized protein	complement(22956..23177)	Acanthamoeba castellanii str. Neff	14924094
ACA1_010930	CDS	ACA1_010930	NW_004457648.1	2346	4026	R	encoded by transcript ACA1_010930A; uncharacterized protein	complement(join(2346..2378,2485..2683,2771..2868,3013..3095,3232..3354,3447..4026))	Acanthamoeba castellanii str. Neff	14924085
ACA1_010940	CDS	ACA1_010940	NW_004457648.1	7635	10313	R	encoded by transcript ACA1_010940A; uncharacterized protein	complement(join(7635..7840,7948..8107,8261..8374,8529..8647,8707..8797,8867..8956,9042..9130,9218..9267,9456..9529,9677..9854,9949..>10313))	Acanthamoeba castellanii str. Neff	14924084
ACA1_008610	CDS	ACA1_008610	NW_004457647.1	5189	7161	D	encoded by transcript ACA1_008610A; uncharacterized protein	join(5189..5198,5237..5341,5459..5521,5638..6113,6187..6305,6392..6506,6837..6896,6979..7161)	Acanthamoeba castellanii str. Neff	14924082
ACA1_008620	CDS	ACA1_008620	NW_004457647.1	7886	8748	D	encoded by transcript ACA1_008620A; GTPase family e4 protein, putative	join(7886..7993,8320..8704,8738..8748)	Acanthamoeba castellanii str. Neff	14924083
ACA1_008730	CDS	ACA1_008730	NW_004457647.1	12359	12934	D	encoded by transcript ACA1_008730A; uncharacterized protein	join(12359..12437,12521..12787,12861..12934)	Acanthamoeba castellanii str. Neff	14924080
ACA1_008740	CDS	ACA1_008740	NW_004457647.1	13010	13423	R	encoded by transcript ACA1_008740A; uncharacterized protein	complement(join(13010..13121,13215..13423))	Acanthamoeba castellanii str. Neff	14924081
ACA1_083200	CDS	ACA1_083200	NW_004457646.1	388	1569	R	encoded by transcript ACA1_083200A; BNR/Aspbox repeat domain containing protein	complement(join(388..911,993..1158,1216..1569))	Acanthamoeba castellanii str. Neff	14924079
ACA1_083310	CDS	ACA1_083310	NW_004457646.1	4386	7072	D	encoded by transcript ACA1_083310A; uncharacterized protein	join(4386..4460,4781..4882,5189..5371,5450..5735,5797..5924,6072..6204,6503..6658,6852..6950,7017..7072)	Acanthamoeba castellanii str. Neff	14924076
ACA1_083320	CDS	ACA1_083320	NW_004457646.1	9167	9556	D	encoded by transcript ACA1_083320A; uncharacterized protein	join(9167..9193,9365..9556)	Acanthamoeba castellanii str. Neff	14924077
ACA1_083430	CDS	ACA1_083430	NW_004457646.1	12923	14140	R	encoded by transcript ACA1_083430A; multi-sensor hybrid histidine kinase	complement(join(<12923..13188,13340..13497,13762..13838,13898..13941,14069..14140))	Acanthamoeba castellanii str. Neff	14924078
ACA1_306440	CDS	ACA1_306440	NW_004457645.1	1359	2536	R	encoded by transcript ACA1_306440A; uncharacterized protein	complement(join(1359..1540,1712..1739,2154..2260,2437..2536))	Acanthamoeba castellanii str. Neff	14924072
ACA1_306550	CDS	ACA1_306550	NW_004457645.1	9927	11796	D	encoded by transcript ACA1_306550A; uncharacterized protein	join(9927..9935,10006..10062,10386..10483,10584..10650,10757..10811,10948..11103,11226..11364,11706..11796)	Acanthamoeba castellanii str. Neff	14924074
ACA1_306560	CDS	ACA1_306560	NW_004457645.1	15241	15549	R	encoded by transcript ACA1_306560A; uncharacterized protein	complement(15241..15549)	Acanthamoeba castellanii str. Neff	14924073
ACA1_306570	CDS	ACA1_306570	NW_004457645.1	17000	17539	D	encoded by transcript ACA1_306570A; NADPHdependent FMN reductase domain containing protein	17000..>17539	Acanthamoeba castellanii str. Neff	14924075
ACA1_359690	CDS	ACA1_359690	NW_004457643.1	76	5040	R	encoded by transcript ACA1_359690A; TBC domain containing protein	complement(join(<76..184,405..444,715..826,953..1075,1257..1372,1488..1607,1754..2093,2313..2460,2586..2664,2972..3506,3638..3799,3916..3965,4159..4270,4438..4544,4721..4827,4901..5040))	Acanthamoeba castellanii str. Neff	14924071
ACA1_359700	CDS	ACA1_359700	NW_004457643.1	5180	5757	R	encoded by transcript ACA1_359700A; ERp19 domain containing protein	complement(join(5180..5468,5540..5757))	Acanthamoeba castellanii str. Neff	14923944
ACA1_359710	CDS	ACA1_359710	NW_004457643.1	6024	8909	R	encoded by transcript ACA1_359710A; transcriptional repressor TUP1, putative	complement(join(6024..6248,6354..6566,6717..6806,6907..7165,7243..7479,7618..7735,7902..8015,8142..8336,8408..8544,8610..8691,8768..8909))	Acanthamoeba castellanii str. Neff	14923945
ACA1_359720	CDS	ACA1_359720	NW_004457643.1	9685	10059	D	encoded by transcript ACA1_359720A; uncharacterized protein	join(9685..9774,9830..9901,9997..10059)	Acanthamoeba castellanii str. Neff	14923946
ACA1_359730	CDS	ACA1_359730	NW_004457643.1	10593	14375	D	encoded by transcript ACA1_359730A; myblike DNA-binding domain, SHAQKYF class subfamily protein	join(10593..11027,11204..11269,11437..11556,11575..11665,11838..12016,12097..12219,12355..12425,12553..12716,12820..13364,13467..13931,14030..14094,14234..14375)	Acanthamoeba castellanii str. Neff	14923947
ACA1_359740	CDS	ACA1_359740	NW_004457643.1	14762	15715	R	encoded by transcript ACA1_359740A; uncharacterized protein	complement(join(14762..14842,14925..15055,15163..15256,15359..15715))	Acanthamoeba castellanii str. Neff	14923948
ACA1_359750	CDS	ACA1_359750	NW_004457643.1	15792	17237	R	encoded by transcript ACA1_359750A; succinyl coenzyme A synthetase alpha subunit	complement(join(15792..15949,16178..16282,16388..16687,16850..16991,17106..>17237))	Acanthamoeba castellanii str. Neff	14923949
ACA1_359760	CDS	ACA1_359760	NW_004457643.1	18059	19514	D	encoded by transcript ACA1_359760A; uncharacterized protein	join(18059..18085,18152..18452,18559..19514)	Acanthamoeba castellanii str. Neff	14923950
ACA1_359770	CDS	ACA1_359770	NW_004457643.1	19761	20084	D	encoded by transcript ACA1_359770A; deoxyuridine 5'triphosphate nucleotidohydrolase	19761..20084	Acanthamoeba castellanii str. Neff	14923951
ACA1_359780	CDS	ACA1_359780	NW_004457643.1	20185	20462	D	encoded by transcript ACA1_359780A; uncharacterized protein	join(20185..20259,20271..>20462)	Acanthamoeba castellanii str. Neff	14923952
ACA1_359890	CDS	ACA1_359890	NW_004457643.1	25031	25588	R	encoded by transcript ACA1_359890A; uncharacterized protein	complement(25031..25588)	Acanthamoeba castellanii str. Neff	14923953
ACA1_360000	CDS	ACA1_360000	NW_004457643.1	30320	32627	D	encoded by transcript ACA1_360000A; mRNA capping enzyme, catalytic domain containing protein	join(30320..30372,30470..30795,30888..31049,31130..32011,32101..32412,32494..32627)	Acanthamoeba castellanii str. Neff	14923954
ACA1_360010	CDS	ACA1_360010	NW_004457643.1	32856	33388	D	encoded by transcript ACA1_360010A; tubulin binding cofactor A, putative	join(32856..32902,32966..33071,33134..33220,33305..33388)	Acanthamoeba castellanii str. Neff	14923955
ACA1_360020	CDS	ACA1_360020	NW_004457643.1	33339	35781	R	encoded by transcript ACA1_360020A; mannosyltransferase	complement(join(33339..33629,33755..33840,33927..34006,34083..34227,34323..34474,34549..34687,34767..34875,34993..35106,35196..35281,35352..35468,35541..35594,35721..35781))	Acanthamoeba castellanii str. Neff	14923956
ACA1_360030	CDS	ACA1_360030	NW_004457643.1	35909	36170	R	encoded by transcript ACA1_360030A; uncharacterized protein	complement(join(35909..36067,36084..36170))	Acanthamoeba castellanii str. Neff	14923957
ACA1_360040	CDS	ACA1_360040	NW_004457643.1	36309	37851	R	encoded by transcript ACA1_360040A; ribosomal protein S8e, putative	complement(join(36309..36428,36515..36640,36732..36841,36976..37109,37250..37348,37477..37596,37679..37746,37849..37851))	Acanthamoeba castellanii str. Neff	14923958
ACA1_360050	CDS	ACA1_360050	NW_004457643.1	38084	39432	D	encoded by transcript ACA1_360050A; zinc finger domain containing protein	join(38084..38127,38442..38638,38789..39432)	Acanthamoeba castellanii str. Neff	14923959
ACA1_360060	CDS	ACA1_360060	NW_004457643.1	39575	40503	R	encoded by transcript ACA1_360060A; GHMP kinase family protein	complement(join(39575..39717,39788..39900,39980..40068,40139..40272,40347..40503))	Acanthamoeba castellanii str. Neff	14923960
ACA1_360070	CDS	ACA1_360070	NW_004457643.1	40772	43332	R	encoded by transcript ACA1_360070A; threonine synthase	complement(join(40772..41146,41225..41367,41433..41510,41585..41743,41828..41910,41998..42143,42217..42368,42446..42571,42792..43332))	Acanthamoeba castellanii str. Neff	14923961
ACA1_360080	CDS	ACA1_360080	NW_004457643.1	43694	48150	D	encoded by transcript ACA1_360080A; uncharacterized protein	join(43694..43799,43895..44005,44121..44237,44327..44632,44707..44828,44916..45896,46020..46102,46233..46281,46375..46500,46577..46700,46803..46943,47040..47155,47264..47544,47656..47738,47873..48150)	Acanthamoeba castellanii str. Neff	14923962
ACA1_360090	CDS	ACA1_360090	NW_004457643.1	48214	48740	R	encoded by transcript ACA1_360090A; uncharacterized protein	complement(join(48214..48315,48403..48555,48654..48740))	Acanthamoeba castellanii str. Neff	14923963
ACA1_360100	CDS	ACA1_360100	NW_004457643.1	48810	50193	D	encoded by transcript ACA1_360100A; uncharacterized protein	join(48810..48894,49003..49229,49326..49539,49608..49709,49790..50193)	Acanthamoeba castellanii str. Neff	14923964
ACA1_360110	CDS	ACA1_360110	NW_004457643.1	50282	51498	R	encoded by transcript ACA1_360110A; uncharacterized protein	complement(join(50282..50645,50767..50869,50955..51062,51135..51265,51335..51498))	Acanthamoeba castellanii str. Neff	14923965
ACA1_360120	CDS	ACA1_360120	NW_004457643.1	51538	51831	R	encoded by transcript ACA1_360120A; uncharacterized protein	complement(51538..51831)	Acanthamoeba castellanii str. Neff	14923966
ACA1_360130	CDS	ACA1_360130	NW_004457643.1	52083	55364	R	encoded by transcript ACA1_360130A; exonuclease	complement(join(52083..52263,52342..53026,53114..53209,53295..53368,53454..53543,53658..53773,53869..54079,54178..54345,54428..54527,54599..54722,54777..55364))	Acanthamoeba castellanii str. Neff	14923967
ACA1_360140	CDS	ACA1_360140	NW_004457643.1	55837	59499	D	encoded by transcript ACA1_360140A; dynamin family protein	join(<55837..56390,56479..56573,56649..56796,56817..56995,57186..57321,57402..57538,57622..57695,57772..57962,58023..58332,58417..58545,58619..58774,58833..58990,59069..59209,59295..59499)	Acanthamoeba castellanii str. Neff	14923968
ACA1_360150	CDS	ACA1_360150	NW_004457643.1	59654	62109	D	encoded by transcript ACA1_360150A; malate synthase A, putative	join(59654..59890,59990..60125,60194..60242,60340..60476,60558..60755,60861..60984,61053..61227,61334..61432,61528..61623,61708..62109)	Acanthamoeba castellanii str. Neff	14923969
ACA1_360160	CDS	ACA1_360160	NW_004457643.1	62197	62856	R	encoded by transcript ACA1_360160A; adenine phosphoribosyltransferase	complement(join(62197..62363,62439..62856))	Acanthamoeba castellanii str. Neff	14923970
ACA1_360170	CDS	ACA1_360170	NW_004457643.1	62974	64043	R	encoded by transcript ACA1_360170A; Ras subfamily protein	complement(join(62974..63247,63571..63663,63747..63867,63947..64043))	Acanthamoeba castellanii str. Neff	14923971
ACA1_360180	CDS	ACA1_360180	NW_004457643.1	64857	65653	R	encoded by transcript ACA1_360180A; Ras subfamily protein	complement(join(64857..65162,65240..65345,65445..65653))	Acanthamoeba castellanii str. Neff	14923972
ACA1_360190	CDS	ACA1_360190	NW_004457643.1	65953	68407	D	encoded by transcript ACA1_360190A; amine oxidase, flavincontaining superfamily protein	join(65953..65977,66078..66169,66314..66353,66422..66553,66651..66766,66862..66924,67027..67119,67192..67320,67406..67540,67608..67676,67756..67813,67903..68033,68103..68192,68267..68407)	Acanthamoeba castellanii str. Neff	14923973
ACA1_360200	CDS	ACA1_360200	NW_004457643.1	68675	69142	D	encoded by transcript ACA1_360200A; 60s Acidic ribosomal protein	join(68675..68761,68840..69142)	Acanthamoeba castellanii str. Neff	14923974
ACA1_360210	CDS	ACA1_360210	NW_004457643.1	69255	70657	D	encoded by transcript ACA1_360210A; Fbox domain containing protein	join(69255..69456,69543..70657)	Acanthamoeba castellanii str. Neff	14923975
ACA1_360220	CDS	ACA1_360220	NW_004457643.1	70842	71413	D	encoded by transcript ACA1_360220A; H/ACA ribonucleoprotein complex subunit 2like protein	join(70842..70950,71022..71091,71170..71413)	Acanthamoeba castellanii str. Neff	14923976
ACA1_360230	CDS	ACA1_360230	NW_004457643.1	71521	71859	R	encoded by transcript ACA1_360230A; uncharacterized protein	complement(71521..71859)	Acanthamoeba castellanii str. Neff	14923977
ACA1_360240	CDS	ACA1_360240	NW_004457643.1	72417	74837	D	encoded by transcript ACA1_360240A; jumonji domain containing 4 isoform 1, putative	join(72417..72639,72693..72772,72869..73009,73083..73143,73221..73314,73408..73478,73581..73669,73749..73823,73902..73954,74028..74059,74167..74286,74371..74491,74588..74837)	Acanthamoeba castellanii str. Neff	14923978
ACA1_360250	CDS	ACA1_360250	NW_004457643.1	75357	77571	R	encoded by transcript ACA1_360250A; nucleic acid methylase	complement(join(75357..75629,75723..75878,76005..76091,76199..76298,76372..76466,76585..76866,77039..77099,77170..77253,77345..77571))	Acanthamoeba castellanii str. Neff	14923979
ACA1_360260	CDS	ACA1_360260	NW_004457643.1	77765	79297	D	encoded by transcript ACA1_360260A; SMP30/CGR1 family protein	join(77765..77884,78052..78266,78345..78490,78576..78684,78753..78809,78900..78938,79004..79061,79145..79297)	Acanthamoeba castellanii str. Neff	14923980
ACA1_360270	CDS	ACA1_360270	NW_004457643.1	79684	81311	D	encoded by transcript ACA1_360270A; uncharacterized protein	join(79684..79779,80051..80188,80289..80362,80455..80565,80633..80849,80960..81054,81140..81311)	Acanthamoeba castellanii str. Neff	14923981
ACA1_360280	CDS	ACA1_360280	NW_004457643.1	82012	83043	D	encoded by transcript ACA1_360280A; uncharacterized protein	82012..83043	Acanthamoeba castellanii str. Neff	14923982
ACA1_360290	CDS	ACA1_360290	NW_004457643.1	83336	84199	D	encoded by transcript ACA1_360290A; singlestrand binding protein family	join(83336..83356,83420..83456,83535..83775,83992..84199)	Acanthamoeba castellanii str. Neff	14923983
ACA1_360300	CDS	ACA1_360300	NW_004457643.1	84322	85671	D	encoded by transcript ACA1_360300A; 3' exoribonuclease family, domain 1 domain containing protein	join(84322..84475,84593..84671,84765..84876,84982..85191,85268..85417,85552..85671)	Acanthamoeba castellanii str. Neff	14923984
ACA1_360310	CDS	ACA1_360310	NW_004457643.1	85709	87328	R	encoded by transcript ACA1_360310A; Histone-lysine N-methyltransferase	complement(join(85709..85934,86008..86591,86693..87328))	Acanthamoeba castellanii str. Neff	14923985
ACA1_360320	CDS	ACA1_360320	NW_004457643.1	87470	88216	D	encoded by transcript ACA1_360320A; SAP domain containing protein	join(87470..87878,87912..88216)	Acanthamoeba castellanii str. Neff	14923986
ACA1_360330	CDS	ACA1_360330	NW_004457643.1	88463	91811	R	encoded by transcript ACA1_360330A; sulfatase domain containing protein	complement(join(88463..88796,88894..89006,89108..89503,89590..89711,89796..89918,89929..89952,90093..90214,90297..90496,90621..90713,90793..90962,91080..91236,91282..91620,91649..91665,91745..91811))	Acanthamoeba castellanii str. Neff	14923987
ACA1_360340	CDS	ACA1_360340	NW_004457643.1	92080	100092	D	encoded by transcript ACA1_360340A; uncharacterized protein	join(92080..92191,92259..92740,92831..93210,93279..93417,93491..93704,93801..93980,94069..94179,94283..94417,94489..94583,94674..94782,94856..94974,95110..95231,95345..95702,95772..96077,96253..96503,96657..96897,96989..97429,97508..97617,97696..97929,97999..98417,98493..98828,98929..99107,99215..99494,99588..99897,99990..100092)	Acanthamoeba castellanii str. Neff	14923988
ACA1_360350	CDS	ACA1_360350	NW_004457643.1	100261	102804	R	encoded by transcript ACA1_360350A; glycosyl hydrolase family 20, catalytic domain containing protein	complement(join(100261..100330,100422..100561,100637..100720,100800..100865,100945..101319,101399..101558,101635..101754,101857..101933,102011..102092,102203..102804))	Acanthamoeba castellanii str. Neff	14923989
ACA1_360360	CDS	ACA1_360360	NW_004457643.1	103162	104881	D	encoded by transcript ACA1_360360A; GRAM domain containing protein	join(103162..103588,103664..103791,103881..103963,104031..104134,104210..104299,104386..104501,104582..104881)	Acanthamoeba castellanii str. Neff	14923990
ACA1_360380	CDS	ACA1_360380	NW_004457643.1	107763	111543	D	encoded by transcript ACA1_360380A; DNA repair and recombination protein pif1, putative	join(107763..108879,108976..109130,109190..109321,109411..109433,109497..109607,109672..109740,109820..110049,110143..110226,110303..110350,110365..110446,110527..110591,110683..110833,110976..111543)	Acanthamoeba castellanii str. Neff	14923992
ACA1_360390	CDS	ACA1_360390	NW_004457643.1	111748	113520	R	encoded by transcript ACA1_360390A; transporter, major facilitator superfamily superfamily protein	complement(111748..113520)	Acanthamoeba castellanii str. Neff	14923993
ACA1_360400	CDS	ACA1_360400	NW_004457643.1	113829	119434	D	encoded by transcript ACA1_360400A; phosphate ABC transporter, phosphatebinding protein PstS, putative	join(113829..113858,114017..114381,114470..114803,114866..114990,115064..115287,115360..115541,115614..116009,116089..116199,116281..116438,116522..116624,116698..116863,116933..117158,117270..117543,117605..117779,117873..117981,118045..118251,118318..118422,118490..118562,118645..118756,118831..118889,118988..119116,119246..119434)	Acanthamoeba castellanii str. Neff	14923994
ACA1_360410	CDS	ACA1_360410	NW_004457643.1	120086	126711	D	encoded by transcript ACA1_360410A; phosphoinositide 3kinase family, accessory domain (pik domain) domain containing protein	join(120086..120313,120406..120474,120560..121111,121186..121361,121451..121541,121633..121733,121820..121980,122055..122221,122307..122717,122843..122969,123050..123168,123279..123367,123443..123495,123581..123688,123771..123935,124051..124127,124214..124300,124358..124466,124668..124837,124880..125140,125237..125377,125591..125704,125765..125858,125947..125987,126080..126188,126256..126313,126483..126711)	Acanthamoeba castellanii str. Neff	14923995
ACA1_360420	CDS	ACA1_360420	NW_004457643.1	126858	127594	D	encoded by transcript ACA1_360420A; uncharacterized protein	join(126858..127446,127581..127594)	Acanthamoeba castellanii str. Neff	14923996
ACA1_360430	CDS	ACA1_360430	NW_004457643.1	128046	130783	D	encoded by transcript ACA1_360430A; uncharacterized protein	join(128046..128111,128172..128275,128341..128751,128811..128922,128997..129221,129291..129504,129575..129672,129732..129845,129915..130083,130170..130783)	Acanthamoeba castellanii str. Neff	14923997
ACA1_360440	CDS	ACA1_360440	NW_004457643.1	131138	133094	D	encoded by transcript ACA1_360440A; uncharacterized protein	join(131138..131330,131393..131672,131771..132008,132081..132183,132270..132788,132904..133094)	Acanthamoeba castellanii str. Neff	14923998
ACA1_360450	CDS	ACA1_360450	NW_004457643.1	133290	135703	D	encoded by transcript ACA1_360450A; protein kinase domain containing protein	join(133290..133413,133506..133979,134052..134118,134206..134244,134352..134606,134709..134926,135015..135703)	Acanthamoeba castellanii str. Neff	14923999
ACA1_360460	CDS	ACA1_360460	NW_004457643.1	137915	138145	R	encoded by transcript ACA1_360460A; uncharacterized protein	complement(137915..>138145)	Acanthamoeba castellanii str. Neff	14924000
ACA1_360470	CDS	ACA1_360470	NW_004457643.1	140716	141349	D	encoded by transcript ACA1_360470A; uncharacterized protein	join(140716..140855,141163..141349)	Acanthamoeba castellanii str. Neff	14924001
ACA1_360480	CDS	ACA1_360480	NW_004457643.1	141432	141851	D	encoded by transcript ACA1_360480A; uncharacterized protein	join(141432..141794,141840..141851)	Acanthamoeba castellanii str. Neff	14924002
ACA1_360490	CDS	ACA1_360490	NW_004457643.1	143064	143201	D	encoded by transcript ACA1_360490A; uncharacterized protein	143064..143201	Acanthamoeba castellanii str. Neff	14924003
ACA1_360500	CDS	ACA1_360500	NW_004457643.1	143556	146820	R	encoded by transcript ACA1_360500A; ABC2 type transporter superfamily protein	complement(join(143556..143666,143765..143818,143896..143995,144071..144250,144352..144482,144598..144658,144771..144851,144946..145108,145235..145301,145477..145661,145742..145850,145937..146052,146140..146232,146305..146358,146421..146600,146661..146820))	Acanthamoeba castellanii str. Neff	14924004
ACA1_360510	CDS	ACA1_360510	NW_004457643.1	147075	148196	D	encoded by transcript ACA1_360510A; 4alpha-methyl-sterol C4-methyl-oxidase	join(147075..147481,147542..147656,147722..147846,147912..147993,148161..148196)	Acanthamoeba castellanii str. Neff	14924005
ACA1_360520	CDS	ACA1_360520	NW_004457643.1	148360	149280	R	encoded by transcript ACA1_360520A; Ras GTPase, putative	complement(join(148360..148773,148908..148979,149200..149280))	Acanthamoeba castellanii str. Neff	14924006
ACA1_360530	CDS	ACA1_360530	NW_004457643.1	149570	151622	R	encoded by transcript ACA1_360530A; 23S rRNA (uracil5-)-methyltransferase RumA, putative	complement(join(149570..149860,149951..150079,150162..150419,150537..150742,150822..151080,151215..151513,151571..>151622))	Acanthamoeba castellanii str. Neff	14924007
ACA1_360540	CDS	ACA1_360540	NW_004457643.1	152225	156333	D	encoded by transcript ACA1_360540A; GTPaseactivator protein for Ras-like GTPase	join(152225..152368,152499..152729,152817..152910,153022..153347,153459..153813,153905..154026,154123..154802,154869..156333)	Acanthamoeba castellanii str. Neff	14924008
ACA1_360550	CDS	ACA1_360550	NW_004457643.1	156406	162421	R	encoded by transcript ACA1_360550A; uncharacterized protein	complement(join(156406..156495,156607..156957,157093..157242,157907..157972,158101..158289,158384..158488,158585..158757,158827..158875,158992..159138,159232..159335,159440..159515,159588..159719,159819..159974,160066..160199,160283..160398,160772..160938,161025..161150,161233..161345,161426..161528,161559..161709,161742..162162,162283..162421))	Acanthamoeba castellanii str. Neff	14924009
ACA1_360560	CDS	ACA1_360560	NW_004457643.1	162575	163906	R	encoded by transcript ACA1_360560A; Cut9 interacting protein Scn1, putative	complement(join(162575..162862,162948..163186,163261..163372,163438..163654,163734..163906))	Acanthamoeba castellanii str. Neff	14924010
ACA1_360570	CDS	ACA1_360570	NW_004457643.1	164028	165436	D	encoded by transcript ACA1_360570A; asparaginase	join(164028..164190,164271..164433,164499..164642,164704..165163,165247..165340,165408..165436)	Acanthamoeba castellanii str. Neff	14924011
ACA1_360580	CDS	ACA1_360580	NW_004457643.1	165526	166389	R	encoded by transcript ACA1_360580A; Per1like domain containing 1, putative	complement(join(165526..165717,165773..165857,166062..166172,166235..166317,166378..166389))	Acanthamoeba castellanii str. Neff	14924012
ACA1_360590	CDS	ACA1_360590	NW_004457643.1	166894	167681	R	encoded by transcript ACA1_360590A; uncharacterized protein	complement(join(166894..167057,167149..167289,167354..167681))	Acanthamoeba castellanii str. Neff	14924013
ACA1_360600	CDS	ACA1_360600	NW_004457643.1	167909	169071	D	encoded by transcript ACA1_360600A; uncharacterized protein	join(167909..168014,168101..168196,168289..168353,168463..169071)	Acanthamoeba castellanii str. Neff	14924014
ACA1_360610	CDS	ACA1_360610	NW_004457643.1	169344	180897	D	encoded by transcript ACA1_360610A; protein kinase domain containing protein	join(169344..169445,169590..169736,169833..169939,170037..170347,170491..170699,170878..171022,171088..171182,171273..171375,171467..171529,171601..171731,171819..171865,171933..172002,172075..172164,172258..173175,173253..173670,173759..173835,173948..174069,174149..174270,174366..174480,174598..174745,174833..175154,175271..175455,175544..175878,175961..176092,176223..176419,176505..176650,176719..176794,176873..176946,176959..177024,177105..177415,177538..177659,177753..177874,178005..178107,178218..178268,178346..178490,178598..179137,179150..180713,180802..180897)	Acanthamoeba castellanii str. Neff	14924015
ACA1_360620	CDS	ACA1_360620	NW_004457643.1	181083	182281	D	encoded by transcript ACA1_360620A; Ras subfamily protein	join(181083..181488,181597..181620,181670..181778,181809..182035,182106..182281)	Acanthamoeba castellanii str. Neff	14924016
ACA1_360630	CDS	ACA1_360630	NW_004457643.1	182343	183813	D	encoded by transcript ACA1_360630A; PH domain containing protein	join(182343..182479,182573..182652,182744..182815,182901..183009,183090..183813)	Acanthamoeba castellanii str. Neff	14924017
ACA1_360640	CDS	ACA1_360640	NW_004457643.1	184915	185595	D	encoded by transcript ACA1_360640A; uncharacterized protein	184915..185595	Acanthamoeba castellanii str. Neff	14924018
ACA1_360650	CDS	ACA1_360650	NW_004457643.1	186191	186644	R	encoded by transcript ACA1_360650A; uncharacterized protein	complement(join(186191..186323,186397..186495,186580..186644))	Acanthamoeba castellanii str. Neff	14924019
ACA1_360660	CDS	ACA1_360660	NW_004457643.1	186673	187203	R	encoded by transcript ACA1_360660A; uncharacterized protein	complement(join(186673..186905,186928..187048,187141..>187203))	Acanthamoeba castellanii str. Neff	14924020
ACA1_360770	CDS	ACA1_360770	NW_004457643.1	188762	189364	R	encoded by transcript ACA1_360770A; uncharacterized protein	complement(join(188762..188902,189017..189150,189259..189364))	Acanthamoeba castellanii str. Neff	14924021
ACA1_360780	CDS	ACA1_360780	NW_004457643.1	190053	190580	R	encoded by transcript ACA1_360780A; uncharacterized protein	complement(join(190053..190277,190395..190580))	Acanthamoeba castellanii str. Neff	14924022
ACA1_360890	CDS	ACA1_360890	NW_004457643.1	191160	194144	R	encoded by transcript ACA1_360890A; GTPbinding protein HflX, putative	complement(join(191160..191208,191288..191435,191530..191601,191675..191752,191830..191941,192067..192170,192243..192289,192358..192445,192539..192672,192733..192863,192952..193137,193264..193358,193435..193464,193563..193674,193746..194144))	Acanthamoeba castellanii str. Neff	14924023
ACA1_360900	CDS	ACA1_360900	NW_004457643.1	194333	196211	R	encoded by transcript ACA1_360900A; Eukaryotic translation initiation factor 3 subunit 7 (eIF3)	complement(join(194333..194645,194752..195702,195731..195794,195812..196211))	Acanthamoeba castellanii str. Neff	14924024
ACA1_360910	CDS	ACA1_360910	NW_004457643.1	196515	197029	D	encoded by transcript ACA1_360910A; uncharacterized protein	join(196515..196705,196810..197029)	Acanthamoeba castellanii str. Neff	14924025
ACA1_360920	CDS	ACA1_360920	NW_004457643.1	197669	200762	D	encoded by transcript ACA1_360920A; La domain containing protein	join(197669..198215,198287..198389,198485..198967,199074..199320,199413..199536,199618..199866,199989..200133,200292..200368,200460..200629,200721..200762)	Acanthamoeba castellanii str. Neff	14924026
ACA1_360930	CDS	ACA1_360930	NW_004457643.1	201193	202622	D	encoded by transcript ACA1_360930A; FAD binding domain containing protein	join(201193..202308,202323..202622)	Acanthamoeba castellanii str. Neff	14924027
ACA1_360940	CDS	ACA1_360940	NW_004457643.1	202872	204839	R	encoded by transcript ACA1_360940A; uncharacterized protein	complement(join(202872..202919,202942..202999,203298..203396,203613..203751,203823..203949,204032..204118,204291..204388,204452..204527,204747..204839))	Acanthamoeba castellanii str. Neff	14924028
ACA1_360950	CDS	ACA1_360950	NW_004457643.1	205708	208294	R	encoded by transcript ACA1_360950A; ubiquitin domain containing protein	complement(join(205708..205891,205964..206067,206144..206240,206286..206401,206472..206560,206799..206976,207094..207279,207342..207462,207547..207679,207747..207887,207943..208294))	Acanthamoeba castellanii str. Neff	14924029
ACA1_360960	CDS	ACA1_360960	NW_004457643.1	208394	210743	R	encoded by transcript ACA1_360960A; 2amino-3-ketobutyrate coenzyme A ligase	complement(join(208394..208498,208585..208722,208800..208878,208961..209038,209107..209177,209258..209316,209381..209438,209527..209594,209663..209757,209830..209949,210033..210111,210161..210262,210325..210418,210504..210616,210686..210743))	Acanthamoeba castellanii str. Neff	14924030
ACA1_360970	CDS	ACA1_360970	NW_004457643.1	210877	213213	R	encoded by transcript ACA1_360970A; uncharacterized protein	complement(join(210877..211190,211299..211564,211668..211771,211835..212259,212339..212471,212562..212752,212891..213089,213184..213213))	Acanthamoeba castellanii str. Neff	14924031
ACA1_360980	CDS	ACA1_360980	NW_004457643.1	214042	216145	D	encoded by transcript ACA1_360980A; uncharacterized protein	join(214042..214115,214204..214412,214484..214564,214646..214758,214844..215036,215126..215276,215385..215526,215660..216145)	Acanthamoeba castellanii str. Neff	14924032
ACA1_360990	CDS	ACA1_360990	NW_004457643.1	216206	218287	D	encoded by transcript ACA1_360990A; Fbox domain containing protein	join(216206..216490,216548..216676,216749..216911,217028..217199,217266..217353,217682..218287)	Acanthamoeba castellanii str. Neff	14924033
ACA1_361000	CDS	ACA1_361000	NW_004457643.1	218373	219688	R	encoded by transcript ACA1_361000A; hydrolase, NUDIX domain containing protein	complement(join(218373..218812,218891..219016,219126..219329,219407..219448,219622..219688))	Acanthamoeba castellanii str. Neff	14924034
ACA1_361010	CDS	ACA1_361010	NW_004457643.1	220552	222787	D	encoded by transcript ACA1_361010A; CDPdiacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial, putative	join(220552..220638,220788..220865,220971..221087,221182..221336,221431..221533,221652..222038,222120..222191,222297..222450,222514..222596,222668..222787)	Acanthamoeba castellanii str. Neff	14924035
ACA1_361020	CDS	ACA1_361020	NW_004457643.1	223053	223910	R	encoded by transcript ACA1_361020A; ribosomal L22e protein family	complement(join(223053..223322,223406..223753,223884..223910))	Acanthamoeba castellanii str. Neff	14924036
ACA1_361040	CDS	ACA1_361040	NW_004457643.1	224816	226973	D	encoded by transcript ACA1_361040A; aminotransferase, class I/II superfamily protein	join(224816..225031,225099..225199,225263..225359,225435..225507,225600..226135,226287..226373,226450..226600,226675..226973)	Acanthamoeba castellanii str. Neff	14924038
ACA1_361050	CDS	ACA1_361050	NW_004457643.1	227454	230714	D	encoded by transcript ACA1_361050A; IQ calmodulinbinding motif domain containing protein	join(227454..227840,227980..228073,228216..228361,228548..228635,228874..228931,229042..229116,229248..229388,229507..229549,229646..229735,229808..229894,229995..230221,230405..230714)	Acanthamoeba castellanii str. Neff	14924039
ACA1_361060	CDS	ACA1_361060	NW_004457643.1	231112	232646	D	encoded by transcript ACA1_361060A; glycosyltransferase family 8 protein	join(231112..231458,231602..231858,231942..232033,232124..232262,232345..232646)	Acanthamoeba castellanii str. Neff	14924040
ACA1_361070	CDS	ACA1_361070	NW_004457643.1	232858	235306	R	encoded by transcript ACA1_361070A; PUB domain containing protein	complement(join(232858..232982,233073..233199,233285..233421,233500..233678,233752..233842,233888..234070,234135..234228,234321..234412,234516..234638,234733..235306))	Acanthamoeba castellanii str. Neff	14924041
ACA1_361080	CDS	ACA1_361080	NW_004457643.1	236578	237380	D	encoded by transcript ACA1_361080A; uncharacterized protein	join(236578..236701,237002..237087,237156..237217,237284..237380)	Acanthamoeba castellanii str. Neff	14924042
ACA1_361090	CDS	ACA1_361090	NW_004457643.1	237564	240801	D	encoded by transcript ACA1_361090A; uncharacterized protein	join(237564..237753,237833..237897,237983..238010,238085..238170,238268..238363,238518..238575,238644..238717,238811..238957,239021..239335,239430..239577,239679..240379,240458..240619,240649..240801)	Acanthamoeba castellanii str. Neff	14924043
ACA1_361100	CDS	ACA1_361100	NW_004457643.1	241032	243259	R	encoded by transcript ACA1_361100A; TLD protein	complement(join(241032..241195,241283..241386,241486..241585,241689..241835,241926..242045,242143..243259))	Acanthamoeba castellanii str. Neff	14924044
ACA1_361110	CDS	ACA1_361110	NW_004457643.1	243640	244173	R	encoded by transcript ACA1_361110A; uncharacterized protein	complement(243640..244173)	Acanthamoeba castellanii str. Neff	14924045
ACA1_361120	CDS	ACA1_361120	NW_004457643.1	244532	247618	D	encoded by transcript ACA1_361120A; PH domain containing protein	join(244532..245483,245630..245657,245737..245821,245971..246087,246194..246308,246418..246582,246696..246776,246868..246968,247055..247288,247375..247444,247542..247618)	Acanthamoeba castellanii str. Neff	14924046
ACA1_361130	CDS	ACA1_361130	NW_004457643.1	247739	249185	R	encoded by transcript ACA1_361130A; uncharacterized protein	complement(join(247739..247867,247927..248000,248103..248168,248259..248406,248492..248614,248730..248888,249024..249185))	Acanthamoeba castellanii str. Neff	14924047
ACA1_361140	CDS	ACA1_361140	NW_004457643.1	249562	250750	D	encoded by transcript ACA1_361140A; copper/zinc superoxide dismutase	join(249562..249606,249682..249787,249880..249978,250079..250152,250168..250219,250338..250477,250568..250750)	Acanthamoeba castellanii str. Neff	14924048
ACA1_361150	CDS	ACA1_361150	NW_004457643.1	250861	252669	R	encoded by transcript ACA1_361150A; transcriptional regulator, Sir2 family protein	complement(join(250861..251041,251127..251664,251755..252232,252321..252516,252599..252669))	Acanthamoeba castellanii str. Neff	14924049
ACA1_361160	CDS	ACA1_361160	NW_004457643.1	252866	253549	D	encoded by transcript ACA1_361160A; adenylsulfate kinase	252866..253549	Acanthamoeba castellanii str. Neff	14924050
ACA1_361170	CDS	ACA1_361170	NW_004457643.1	253925	259082	R	encoded by transcript ACA1_361170A; calpain large subunit, domain iii domain containing protein	complement(join(253925..254144,254275..254337,254446..254806,254922..255075,255193..255578,255687..256806,256983..257426,257514..257587,257745..257909,258018..258183,258267..258510,258607..258736,258885..258937,259030..259082))	Acanthamoeba castellanii str. Neff	14924051
ACA1_361180	CDS	ACA1_361180	NW_004457643.1	259246	261164	R	encoded by transcript ACA1_361180A; actin subfamily protein	complement(join(259246..259277,259350..259449,259497..259568,259642..259730,259805..259945,260036..260126,260234..260353,260561..260700,260792..261164))	Acanthamoeba castellanii str. Neff	14924052
ACA1_361190	CDS	ACA1_361190	NW_004457643.1	261241	262751	R	encoded by transcript ACA1_361190A; uncharacterized protein	complement(join(261241..261405,261475..261621,261703..261787,261854..262055,262154..262246,262319..262603,262670..262751))	Acanthamoeba castellanii str. Neff	14924053
ACA1_361210	CDS	ACA1_361210	NW_004457643.1	265494	269725	R	encoded by transcript ACA1_361210A; YEATS family protein	complement(join(265494..265506,265521..266563,266650..266732,266812..266923,267025..267089,267176..267290,267359..267575,267702..267747,267812..268225,268306..268455,268858..269371,269397..269701,269719..269725))	Acanthamoeba castellanii str. Neff	14924055
ACA1_361220	CDS	ACA1_361220	NW_004457643.1	269947	271483	D	encoded by transcript ACA1_361220A; EF hand domain containing protein	join(269947..270084,270190..270348,270491..270619,270692..270850,270929..271030,271105..271260,271373..271483)	Acanthamoeba castellanii str. Neff	14924056
ACA1_361230	CDS	ACA1_361230	NW_004457643.1	271901	274267	D	encoded by transcript ACA1_361230A; Tubulintyrosine ligase family protein	join(271901..272720,272819..273302,273421..273528,273601..273692,273820..273978,274062..274267)	Acanthamoeba castellanii str. Neff	14924057
ACA1_361240	CDS	ACA1_361240	NW_004457643.1	275052	275636	D	encoded by transcript ACA1_361240A; uncharacterized protein	join(275052..275166,275238..275435,275512..275636)	Acanthamoeba castellanii str. Neff	14924058
ACA1_361250	CDS	ACA1_361250	NW_004457643.1	275827	277045	R	encoded by transcript ACA1_361250A; actin-1, putative	complement(join(275827..276586,276678..277045))	Acanthamoeba castellanii str. Neff	14924059
ACA1_361260	CDS	ACA1_361260	NW_004457643.1	277753	279116	R	encoded by transcript ACA1_361260A; Brix domain containing 2, putative	complement(join(277753..277884,277958..278095,278173..278274,278411..278535,278692..278711,278749..279116))	Acanthamoeba castellanii str. Neff	14924060
ACA1_361280	CDS	ACA1_361280	NW_004457643.1	282575	283837	D	encoded by transcript ACA1_361280A; NADdependent epimerase/dehydratase family protein	join(282575..282649,282758..282934,283048..283146,283221..283299,283364..283452,283536..283628,283700..283837)	Acanthamoeba castellanii str. Neff	14924062
ACA1_361290	CDS	ACA1_361290	NW_004457643.1	283970	284876	D	encoded by transcript ACA1_361290A; zinc finger domain containing protein	join(283970..283996,284133..284876)	Acanthamoeba castellanii str. Neff	14924063
ACA1_361300	CDS	ACA1_361300	NW_004457643.1	285843	286583	D	encoded by transcript ACA1_361300A; uncharacterized protein	285843..286583	Acanthamoeba castellanii str. Neff	14924064
ACA1_361310	CDS	ACA1_361310	NW_004457643.1	286695	287920	R	encoded by transcript ACA1_361310A; methyltransferase domain containing protein	complement(join(286695..286750,286831..286943,287053..287174,287247..287363,287458..287678,287755..287920))	Acanthamoeba castellanii str. Neff	14924065
ACA1_361420	CDS	ACA1_361420	NW_004457643.1	289622	290985	D	encoded by transcript ACA1_361420A; uncharacterized protein	join(289622..289702,289744..289812,289908..289982,290046..290151,290321..290389,290457..290505,290569..290778,290823..290985)	Acanthamoeba castellanii str. Neff	14924066
ACA1_361430	CDS	ACA1_361430	NW_004457643.1	291449	293723	D	encoded by transcript ACA1_361430A; RapGAP/RanGAP domain containing protein	join(291449..291632,291726..291838,291931..292113,292201..292276,292362..292460,292529..292632,292717..292819,292910..293207,293341..293444,293546..293595,293670..293723)	Acanthamoeba castellanii str. Neff	14924067
ACA1_361440	CDS	ACA1_361440	NW_004457643.1	294209	294604	D	encoded by transcript ACA1_361440A; uncharacterized protein	join(294209..294471,294538..294604)	Acanthamoeba castellanii str. Neff	14924068
ACA1_361450	CDS	ACA1_361450	NW_004457643.1	294911	295661	R	encoded by transcript ACA1_361450A; DnaJ domain containing protein	complement(join(294911..295119,295274..295342,295388..295661))	Acanthamoeba castellanii str. Neff	14924069
ACA1_361560	CDS	ACA1_361560	NW_004457643.1	296018	297891	D	encoded by transcript ACA1_361560A; BEACH domain containing protein lvsE, putative	join(296018..296186,296279..296307,296403..296547,296662..296951,297072..297145,297241..297399,297501..297629,297719..297830,297883..297891)	Acanthamoeba castellanii str. Neff	14924070
ACA1_035890	CDS	ACA1_035890	NW_004457641.1	104	1097	R	encoded by transcript ACA1_035890A; serine/threonine kinase	complement(join(<104..495,583..715,795..938,960..1097))	Acanthamoeba castellanii str. Neff	14923943
ACA1_036000	CDS	ACA1_036000	NW_004457641.1	11352	14839	R	encoded by transcript ACA1_036000A; DEAD/DEAH box helicase domain containing protein	complement(join(11352..11517,11656..11757,11860..11976,12088..12203,12336..12464,12583..12728,12834..12983,13155..13329,13453..13569,13887..13962,14064..14839))	Acanthamoeba castellanii str. Neff	14923885
ACA1_036010	CDS	ACA1_036010	NW_004457641.1	16664	19956	D	encoded by transcript ACA1_036010A; uncharacterized protein	join(16664..16750,16978..17147,17224..17320,17399..17507,17600..17790,17961..18246,18362..18456,18526..19443,19540..19956)	Acanthamoeba castellanii str. Neff	14923887
ACA1_036020	CDS	ACA1_036020	NW_004457641.1	20146	21870	D	encoded by transcript ACA1_036020A; uncharacterized protein	join(20146..20186,20261..20358,20432..20522,20702..20765,20833..20938,21023..21870)	Acanthamoeba castellanii str. Neff	14923888
ACA1_036030	CDS	ACA1_036030	NW_004457641.1	22328	23628	D	encoded by transcript ACA1_036030A; RAB4, putative	join(22328..22424,22509..22613,22825..22882,22977..23131,23237..23328,23521..23628)	Acanthamoeba castellanii str. Neff	14923886
ACA1_036040	CDS	ACA1_036040	NW_004457641.1	24233	24891	D	encoded by transcript ACA1_036040A; ribosomal protein S7e, putative	join(24233..24699,24789..24891)	Acanthamoeba castellanii str. Neff	14923889
ACA1_036050	CDS	ACA1_036050	NW_004457641.1	25142	25822	D	encoded by transcript ACA1_036050A; DOMON domain containing protein	join(25142..25546,25619..25822)	Acanthamoeba castellanii str. Neff	14923890
ACA1_036060	CDS	ACA1_036060	NW_004457641.1	25955	28537	R	encoded by transcript ACA1_036060A; methyltransferase domain containing protein	complement(join(25955..26396,26461..26608,26675..26877,26962..27080,27181..27264,27985..28043,28129..28537))	Acanthamoeba castellanii str. Neff	14923891
ACA1_036170	CDS	ACA1_036170	NW_004457641.1	28601	30118	D	encoded by transcript ACA1_036170A; erythronate4-phosphate dehydrogenase domain containing protein	join(28601..29020,29109..29292,29390..29565,29636..30118)	Acanthamoeba castellanii str. Neff	14923892
ACA1_036180	CDS	ACA1_036180	NW_004457641.1	30223	35311	R	encoded by transcript ACA1_036180A; MAP kinase, putative	complement(join(30223..31422,31480..31568,31640..31761,31887..32042,32123..32199,32269..32357,32436..32493,32604..32755,32803..32993,33083..33305,33397..33610,33691..33962,34060..34203,34275..34432,34520..34606,34681..34988,35069..35311))	Acanthamoeba castellanii str. Neff	14923893
ACA1_036200	CDS	ACA1_036200	NW_004457641.1	37286	39583	R	encoded by transcript ACA1_036200A; uncharacterized protein	complement(join(37286..37339,37440..37716,37797..37912,38019..38125,38218..38823,39028..39583))	Acanthamoeba castellanii str. Neff	14923895
ACA1_036210	CDS	ACA1_036210	NW_004457641.1	40731	42094	R	encoded by transcript ACA1_036210A; WD domain, G-beta repeat-containing protein	complement(join(40731..41196,41286..41454,41605..41700,41785..41915,42015..42094))	Acanthamoeba castellanii str. Neff	14923896
ACA1_036220	CDS	ACA1_036220	NW_004457641.1	43016	43421	D	encoded by transcript ACA1_036220A; uncharacterized protein	join(43016..43121,43291..43421)	Acanthamoeba castellanii str. Neff	14923897
ACA1_036230	CDS	ACA1_036230	NW_004457641.1	43759	44989	R	encoded by transcript ACA1_036230A; zinc finger, C3HC4 type (RING finger) domain containing protein	complement(join(43759..43999,44117..44252,44338..44441,44546..44629,44746..44840,44951..44989))	Acanthamoeba castellanii str. Neff	14923898
ACA1_036240	CDS	ACA1_036240	NW_004457641.1	45576	52021	R	encoded by transcript ACA1_036240A; serine/threonine kinase	complement(join(45576..45995,46079..46284,46367..46817,47006..47627,47663..47890,47952..48310,48392..48508,48596..48855,48932..49327,49405..49546,49649..49792,49859..50077,50229..50456,50502..50544,50628..50938,51014..51316,51401..51503,51771..51861,51955..52021))	Acanthamoeba castellanii str. Neff	14923899
ACA1_036260	CDS	ACA1_036260	NW_004457641.1	60844	63540	R	encoded by transcript ACA1_036260A; flavocytochrome c subfamily protein	complement(join(60844..61311,61388..61530,61614..61706,61791..61896,61966..62042,62112..62249,62338..62467,62540..62610,62681..62811,62892..63042,63117..63328,63401..63540))	Acanthamoeba castellanii str. Neff	14923901
ACA1_036270	CDS	ACA1_036270	NW_004457641.1	63882	67943	D	encoded by transcript ACA1_036270A; uncharacterized protein	join(63882..64095,64182..64363,64485..65027,65119..65194,65276..65350,65440..65558,65641..65837,65922..66287,66378..66502,66593..66686,66771..66897,66991..67041,67071..67943)	Acanthamoeba castellanii str. Neff	14923902
ACA1_036280	CDS	ACA1_036280	NW_004457641.1	69177	70395	D	encoded by transcript ACA1_036280A; actin-1, putative	join(69177..69544,69636..70395)	Acanthamoeba castellanii str. Neff	14923903
ACA1_036290	CDS	ACA1_036290	NW_004457641.1	71180	73581	R	encoded by transcript ACA1_036290A; phospholipid:sterol acyl transferase	complement(join(71180..71313,71417..71600,71709..71824,71901..71997,72066..72205,72308..72380,72456..72725,72790..72858,72927..73061,73144..73198,73281..73407,73521..73581))	Acanthamoeba castellanii str. Neff	14923904
ACA1_036300	CDS	ACA1_036300	NW_004457641.1	73757	75913	R	encoded by transcript ACA1_036300A; C2 domain containing protein	complement(join(73757..73936,74016..74123,74238..74357,74500..74631,74700..74775,74843..74975,75039..75111,75193..75234,75254..75370,75468..75587,75655..75791,75871..75913))	Acanthamoeba castellanii str. Neff	14923905
ACA1_036310	CDS	ACA1_036310	NW_004457641.1	76145	76903	R	encoded by transcript ACA1_036310A; WD40 repeat-containing protein	complement(join(76145..76222,76306..76341,76436..76552,76630..76744,76824..76903))	Acanthamoeba castellanii str. Neff	14923906
ACA1_036320	CDS	ACA1_036320	NW_004457641.1	77176	78607	R	encoded by transcript ACA1_036320A; WD domain, G-beta repeat-containing protein	complement(join(77176..77315,77404..77466,77537..77605,77688..77733,77806..77889,77975..78079,78134..78230,78564..78607))	Acanthamoeba castellanii str. Neff	14923907
ACA1_036330	CDS	ACA1_036330	NW_004457641.1	78759	80636	R	encoded by transcript ACA1_036330A; Centractin, putative	complement(join(78759..78967,79050..79119,79207..79395,79489..79612,79679..79801,79898..80022,80107..80302,80449..80513,80592..80636))	Acanthamoeba castellanii str. Neff	14923908
ACA1_036340	CDS	ACA1_036340	NW_004457641.1	80855	83290	D	encoded by transcript ACA1_036340A; serine hydroxymethyltransferase	join(80855..81055,81227..81306,81380..81580,81681..81755,81849..81978,82063..82261,82347..82453,82528..82627,82702..82769,82861..83053,83172..83290)	Acanthamoeba castellanii str. Neff	14923909
ACA1_036350	CDS	ACA1_036350	NW_004457641.1	83482	84341	D	encoded by transcript ACA1_036350A; uncharacterized protein	join(83482..84116,84194..84341)	Acanthamoeba castellanii str. Neff	14923910
ACA1_036360	CDS	ACA1_036360	NW_004457641.1	85432	92678	R	encoded by transcript ACA1_036360A; uncharacterized protein	complement(join(85432..86079,86242..86337,86423..86623,86689..86796,86886..87077,87144..87445,87527..87660,87743..87898,88005..88170,88260..88440,88504..88559,88626..88950,89035..89198,89288..89382,89445..89584,89662..89745,89823..89980,90074..90228,90346..91229,91305..91460,91539..91943,92045..92147,92235..92404,92568..92678))	Acanthamoeba castellanii str. Neff	14923911
ACA1_036370	CDS	ACA1_036370	NW_004457641.1	92858	93404	R	encoded by transcript ACA1_036370A; uncharacterized protein	complement(join(92858..93095,93256..93404))	Acanthamoeba castellanii str. Neff	14923912
ACA1_036380	CDS	ACA1_036380	NW_004457641.1	93161	93409	D	encoded by transcript ACA1_036380A; uncharacterized protein	93161..93409	Acanthamoeba castellanii str. Neff	14923914
ACA1_036400	CDS	ACA1_036400	NW_004457641.1	95345	96045	R	encoded by transcript ACA1_036400A; profilin, putative	complement(join(95345..95364,95673..96045))	Acanthamoeba castellanii str. Neff	14923915
ACA1_036420	CDS	ACA1_036420	NW_004457641.1	97633	99758	R	encoded by transcript ACA1_036420A; calponin domain containing protein	complement(join(97633..98927,99094..99213,99296..99536,99678..99758))	Acanthamoeba castellanii str. Neff	14923917
ACA1_036440	CDS	ACA1_036440	NW_004457641.1	101388	102250	R	encoded by transcript ACA1_036440A; Ras subfamily protein	complement(join(101388..101551,101689..101773,101848..102032,102148..102250))	Acanthamoeba castellanii str. Neff	14923942
ACA1_036450	CDS	ACA1_036450	NW_004457641.1	102819	103804	D	encoded by transcript ACA1_036450A; uncharacterized protein	join(102819..102954,102985..103164,103289..103407,103532..103804)	Acanthamoeba castellanii str. Neff	14923919
ACA1_036460	CDS	ACA1_036460	NW_004457641.1	103849	104368	R	encoded by transcript ACA1_036460A; uncharacterized protein	complement(join(103849..103901,104011..104368))	Acanthamoeba castellanii str. Neff	14923920
ACA1_036470	CDS	ACA1_036470	NW_004457641.1	104747	110354	D	encoded by transcript ACA1_036470A; peptidase, S8/S53 subfamily protein	join(104747..105140,105246..105404,105486..105604,105684..105739,105833..105922,105994..106055,106128..106377,106453..106507,106573..106693,106765..106895,107002..107119,107211..107354,107454..107529,107605..107737,107817..107964,108071..108266,108337..108425,108484..108626,108815..108979,109083..109186,109314..109399,109495..109572,109661..109759,109846..110354)	Acanthamoeba castellanii str. Neff	14923921
ACA1_036480	CDS	ACA1_036480	NW_004457641.1	110777	111463	R	encoded by transcript ACA1_036480A; cupin superfamily protein	complement(join(110777..111313,111386..111463))	Acanthamoeba castellanii str. Neff	14923922
ACA1_036490	CDS	ACA1_036490	NW_004457641.1	111896	116288	R	encoded by transcript ACA1_036490A; C2 domain containing protein	complement(join(111896..112047,112125..112189,112273..112380,112460..112518,112567..112644,112756..112965,113062..113256,113329..113436,113548..113739,113831..113893,113957..114039,114123..114262,114355..114510,114586..114718,114801..114833,114895..114922,114937..115077,115149..115204,115279..115369,115465..115562,115632..115767,115873..116186,116264..116288))	Acanthamoeba castellanii str. Neff	14923923
ACA1_036500	CDS	ACA1_036500	NW_004457641.1	117119	119171	R	encoded by transcript ACA1_036500A; uncharacterized protein	complement(join(117119..117720,117775..117994,118072..118174,118258..118403,118516..118624,118739..118908,119139..119171))	Acanthamoeba castellanii str. Neff	14923924
ACA1_036510	CDS	ACA1_036510	NW_004457641.1	119332	125780	R	encoded by transcript ACA1_036510A; phosphate ABC transporter, putative	complement(join(119332..119951,120031..120468,120574..121526,121599..121957,122047..122163,122232..122491,122562..122812,122882..123029,123114..123249,123323..123505,123541..123782,123856..124205,124294..124478,124560..124685,124773..125087,125156..125284,125407..125467,125539..125638,125702..125780))	Acanthamoeba castellanii str. Neff	14923925
ACA1_036520	CDS	ACA1_036520	NW_004457641.1	127260	130542	D	encoded by transcript ACA1_036520A; WD domain, G-beta repeat-containing protein	join(127260..127689,127853..128478,128553..128640,128718..128822,128930..129030,129106..129228,129323..129508,129598..129663,129778..129885,129989..130104,130206..130306,130403..130542)	Acanthamoeba castellanii str. Neff	14923926
ACA1_036530	CDS	ACA1_036530	NW_004457641.1	131309	133300	D	encoded by transcript ACA1_036530A; uncharacterized protein	join(131309..131498,131569..131722,131829..131943,132055..132236,132347..132445,132539..132655,132769..133300)	Acanthamoeba castellanii str. Neff	14923927
ACA1_036540	CDS	ACA1_036540	NW_004457641.1	133736	134068	D	encoded by transcript ACA1_036540A; uncharacterized protein	133736..134068	Acanthamoeba castellanii str. Neff	14923928
ACA1_036550	CDS	ACA1_036550	NW_004457641.1	134884	135090	D	encoded by transcript ACA1_036550A; uncharacterized protein	134884..135090	Acanthamoeba castellanii str. Neff	14923929
ACA1_036560	CDS	ACA1_036560	NW_004457641.1	137131	139749	D	encoded by transcript ACA1_036560A; PHDfinger domain containing protein	join(137131..137211,137274..137743,137822..138434,138513..138753,139015..139280,139360..139463,139554..139749)	Acanthamoeba castellanii str. Neff	14923930
ACA1_036570	CDS	ACA1_036570	NW_004457641.1	140445	140864	R	encoded by transcript ACA1_036570A; reverse transcriptase, putative	complement(140445..140864)	Acanthamoeba castellanii str. Neff	14923931
ACA1_036580	CDS	ACA1_036580	NW_004457641.1	141624	142065	R	encoded by transcript ACA1_036580A; uncharacterized protein	complement(join(141624..141696,141872..142065))	Acanthamoeba castellanii str. Neff	14923932
ACA1_036590	CDS	ACA1_036590	NW_004457641.1	142219	142533	R	encoded by transcript ACA1_036590A; uncharacterized protein	complement(142219..142533)	Acanthamoeba castellanii str. Neff	14923933
ACA1_036610	CDS	ACA1_036610	NW_004457641.1	146437	151852	D	encoded by transcript ACA1_036610A; protein kinase domain containing protein	join(146437..146503,146586..146688,146765..146825,146898..147422,147504..147633,147733..147901,147977..148319,148424..148707,148885..149068,149144..149260,149355..150690,150753..151852)	Acanthamoeba castellanii str. Neff	14923935
ACA1_036620	CDS	ACA1_036620	NW_004457641.1	151951	157435	R	encoded by transcript ACA1_036620A; C2 domain containing protein	complement(join(151951..152093,152163..152233,152388..152505,152596..152719,152795..153091,153188..153282,153449..153572,153659..153766,153900..154088,154223..154437,154557..154690,154780..154814,154829..154928,155025..155126,155220..155283,155368..155589,155670..155760,155828..156061,156181..156368,156425..156626,156731..156900,156973..157435))	Acanthamoeba castellanii str. Neff	14923936
ACA1_036630	CDS	ACA1_036630	NW_004457641.1	158310	159809	R	encoded by transcript ACA1_036630A; uncharacterized protein	complement(join(158310..158330,158459..158602,158678..158860,158948..159220,159302..159413,159512..159630,159786..159809))	Acanthamoeba castellanii str. Neff	14923937
ACA1_036640	CDS	ACA1_036640	NW_004457641.1	159993	161867	R	encoded by transcript ACA1_036640A; uncharacterized protein	complement(join(159993..160409,160475..160570,160635..160722,160802..160923,160987..161310,161534..161667,161732..161867))	Acanthamoeba castellanii str. Neff	14923938
ACA1_036650	CDS	ACA1_036650	NW_004457641.1	163570	164999	R	encoded by transcript ACA1_036650A; uncharacterized protein	complement(join(163570..163646,163791..164010,164110..164234,164292..164396,164481..164639,164759..164999))	Acanthamoeba castellanii str. Neff	14923939
ACA1_036660	CDS	ACA1_036660	NW_004457641.1	165082	167187	R	encoded by transcript ACA1_036660A; ATPase	complement(join(165082..165294,165370..165510,165596..165693,166042..166125,166216..166315,166397..166527,166615..166690,166777..166868,166954..167056,167146..167187))	Acanthamoeba castellanii str. Neff	14923940
ACA1_036670	CDS	ACA1_036670	NW_004457641.1	167691	168523	D	encoded by transcript ACA1_036670A; cupin domain protein	join(167691..167790,167858..168049,168133..168191,168332..168523)	Acanthamoeba castellanii str. Neff	14923941
ACA1_395650	CDS	ACA1_395650	NW_004457640.1	468	1275	D	encoded by transcript ACA1_395650A; uncharacterized protein	join(468..495,615..722,833..963,1118..1213,1231..>1275)	Acanthamoeba castellanii str. Neff	14923884
ACA1_395760	CDS	ACA1_395760	NW_004457640.1	6868	7965	R	encoded by transcript ACA1_395760A; ATPase of the ABC classlike protein	complement(join(<6868..6936,7039..7162,7254..7313,7376..7514,7625..7771,7851..>7965))	Acanthamoeba castellanii str. Neff	14923785
ACA1_395870	CDS	ACA1_395870	NW_004457640.1	14228	14632	D	encoded by transcript ACA1_395870A; abscisic acid activated, putative	join(14228..14285,14359..14439,14512..14594,14624..14632)	Acanthamoeba castellanii str. Neff	14923786
ACA1_395980	CDS	ACA1_395980	NW_004457640.1	16689	18849	D	encoded by transcript ACA1_395980A; cation-transporting atpase 13a1 (g-box binding protein) family protein	join(<16689..16790,16880..17127,17572..17696,17821..17956,18028..18088,18161..18244,18269..18409,18504..18641,18757..18849)	Acanthamoeba castellanii str. Neff	14923787
ACA1_396090	CDS	ACA1_396090	NW_004457640.1	19104	20093	R	encoded by transcript ACA1_396090A; uncharacterized protein	complement(join(19104..19246,19349..19443,19592..19898,19970..20093))	Acanthamoeba castellanii str. Neff	14923783
ACA1_396100	CDS	ACA1_396100	NW_004457640.1	20212	21000	D	encoded by transcript ACA1_396100A; uncharacterized protein	join(20212..20223,20351..20548,20565..20735,20908..21000)	Acanthamoeba castellanii str. Neff	14923784
ACA1_396110	CDS	ACA1_396110	NW_004457640.1	21366	22646	D	encoded by transcript ACA1_396110A; uncharacterized protein	join(21366..21539,21696..21834,21969..22166,22288..22646)	Acanthamoeba castellanii str. Neff	14923788
ACA1_396120	CDS	ACA1_396120	NW_004457640.1	22872	24095	R	encoded by transcript ACA1_396120A; Rasrelated protein Rap-1b precursor, putative	complement(join(22872..22966,23068..23224,23329..23739,23863..23911,24034..24095))	Acanthamoeba castellanii str. Neff	14923789
ACA1_396130	CDS	ACA1_396130	NW_004457640.1	24609	25485	R	encoded by transcript ACA1_396130A; prefoldin, alpha subunit	complement(join(24609..24761,24867..24941,25061..25092,25193..25295,25393..25485))	Acanthamoeba castellanii str. Neff	14923790
ACA1_396140	CDS	ACA1_396140	NW_004457640.1	25563	25898	D	encoded by transcript ACA1_396140A; uncharacterized protein	25563..25898	Acanthamoeba castellanii str. Neff	14923791
ACA1_396150	CDS	ACA1_396150	NW_004457640.1	26206	40933	D	encoded by transcript ACA1_396150A; Dynein heavy chain protein	join(26206..26458,26528..26898,26988..27115,27184..27293,27395..28092,28188..28375,28453..28954,29032..29189,29263..31108,31160..33910,34230..39497,39560..39622,39659..39955,40127..40933)	Acanthamoeba castellanii str. Neff	14923792
ACA1_396170	CDS	ACA1_396170	NW_004457640.1	44092	46271	R	encoded by transcript ACA1_396170A; phosphatidylserine decarboxylase	complement(join(44092..44228,44311..44380,44444..44563,44645..44770,44867..44989,45106..45201,45301..45431,45544..45748,45839..46000,46128..46271))	Acanthamoeba castellanii str. Neff	14923794
ACA1_396180	CDS	ACA1_396180	NW_004457640.1	46305	47120	R	encoded by transcript ACA1_396180A; C2 domain containing protein	complement(join(46305..46496,46608..46668,46773..46855,46935..46996,47066..47120))	Acanthamoeba castellanii str. Neff	14923795
ACA1_396190	CDS	ACA1_396190	NW_004457640.1	47403	49836	D	encoded by transcript ACA1_396190A; glutamine-tRNA ligase	join(47403..47522,47638..49836)	Acanthamoeba castellanii str. Neff	14923796
ACA1_396200	CDS	ACA1_396200	NW_004457640.1	50074	51533	D	encoded by transcript ACA1_396200A; Lthreonine dehydrogenase	join(50074..50782,50861..51005,51107..51201,51287..51394,51490..51533)	Acanthamoeba castellanii str. Neff	14923797
ACA1_396210	CDS	ACA1_396210	NW_004457640.1	53389	55910	D	encoded by transcript ACA1_396210A; U4/U6 small nuclear ribonucleoprotein Prp4, putative	join(53389..53434,53514..53758,53913..54050,54181..54263,54404..54500,54631..54784,54883..55006,55105..55396,55554..55910)	Acanthamoeba castellanii str. Neff	14923798
ACA1_396220	CDS	ACA1_396220	NW_004457640.1	56094	59075	D	encoded by transcript ACA1_396220A; acylCoA dehydrogenase, middle domain containing protein	join(56094..56583,56732..56800,56884..56994,57080..57330,57403..57623,57686..57977,58083..58208,58338..58490,58637..58945,59025..59075)	Acanthamoeba castellanii str. Neff	14923799
ACA1_396230	CDS	ACA1_396230	NW_004457640.1	59487	60756	D	encoded by transcript ACA1_396230A; uncharacterized protein	join(59487..59559,59892..59926,59956..60756)	Acanthamoeba castellanii str. Neff	14923800
ACA1_396240	CDS	ACA1_396240	NW_004457640.1	60980	62622	D	encoded by transcript ACA1_396240A; transcription factor e2f/dimerization partner (tdp) domain containing protein	join(60980..61031,61225..61305,61416..61669,61777..61848,61905..62078,62127..62195,62281..62622)	Acanthamoeba castellanii str. Neff	14923801
ACA1_396250	CDS	ACA1_396250	NW_004457640.1	62745	64991	R	encoded by transcript ACA1_396250A; NAF1 domain containing protein	complement(join(62745..63396,63477..63532,63617..64003,64110..64991))	Acanthamoeba castellanii str. Neff	14923802
ACA1_396260	CDS	ACA1_396260	NW_004457640.1	65242	67131	D	encoded by transcript ACA1_396260A; uncharacterized protein	join(65242..65295,65403..65637,65741..65775,65980..66015,66112..66186,66389..66490,66585..66675,66814..66972,67082..67131)	Acanthamoeba castellanii str. Neff	14923803
ACA1_396270	CDS	ACA1_396270	NW_004457640.1	67833	70660	D	encoded by transcript ACA1_396270A; uncharacterized protein	join(67833..68522,68600..68685,68795..69013,69076..69685,69772..69909,70027..70156,70290..70368,70456..70660)	Acanthamoeba castellanii str. Neff	14923804
ACA1_396280	CDS	ACA1_396280	NW_004457640.1	70750	72671	R	encoded by transcript ACA1_396280A; FHA domain containing protein	complement(join(70750..71081,71221..71340,71541..71717,71816..71927,72078..72671))	Acanthamoeba castellanii str. Neff	14923805
ACA1_396290	CDS	ACA1_396290	NW_004457640.1	72886	74415	D	encoded by transcript ACA1_396290A; uncharacterized protein	join(72886..73069,73282..73399,73497..73586,73719..73953,74044..74415)	Acanthamoeba castellanii str. Neff	14923806
ACA1_396300	CDS	ACA1_396300	NW_004457640.1	74695	75572	R	encoded by transcript ACA1_396300A; e2fassociated phosphoprotein	complement(join(74695..74853,74952..75572))	Acanthamoeba castellanii str. Neff	14923807
ACA1_396310	CDS	ACA1_396310	NW_004457640.1	75773	79576	D	encoded by transcript ACA1_396310A; PH domain containing protein	join(75773..75921,76065..76128,76211..76294,76431..76546,76830..77013,77076..77318,77365..77648,77780..77861,77924..77987,79266..79576)	Acanthamoeba castellanii str. Neff	14923808
ACA1_396420	CDS	ACA1_396420	NW_004457640.1	79667	83088	R	encoded by transcript ACA1_396420A; amine oxidase, flavincontaining superfamily protein	complement(join(79667..79821,79970..80129,80898..80990,81095..81166,81349..81441,81574..81615,81750..81802,81944..82070,82219..82281,82544..82780,82981..83088))	Acanthamoeba castellanii str. Neff	14923809
ACA1_396530	CDS	ACA1_396530	NW_004457640.1	83362	84549	R	encoded by transcript ACA1_396530A; nucleoporin 54, putative	complement(join(83362..83523,83552..83713,83795..83854,83930..84019,84125..84221,84300..84412,84511..84549))	Acanthamoeba castellanii str. Neff	14923810
ACA1_396540	CDS	ACA1_396540	NW_004457640.1	85446	87309	D	encoded by transcript ACA1_396540A; Actinrelated protein 3, putative	join(85446..85808,85937..86140,86236..86379,86498..86764,86902..87111,87211..87309)	Acanthamoeba castellanii str. Neff	14923811
ACA1_396550	CDS	ACA1_396550	NW_004457640.1	87468	90523	R	encoded by transcript ACA1_396550A; uncharacterized protein	complement(join(87468..88126,89283..89316,89375..89524,89609..89756,89853..89949,90041..90150,90219..90320,90420..90523))	Acanthamoeba castellanii str. Neff	14923812
ACA1_396660	CDS	ACA1_396660	NW_004457640.1	90742	91543	D	encoded by transcript ACA1_396660A; Armadillo/beta-catenin family repeat-containing protein	join(90742..91189,91347..91424,91479..91543)	Acanthamoeba castellanii str. Neff	14923813
ACA1_396670	CDS	ACA1_396670	NW_004457640.1	92083	93008	D	encoded by transcript ACA1_396670A; uncharacterized protein	join(92083..92344,92595..92717,92872..93008)	Acanthamoeba castellanii str. Neff	14923814
ACA1_396680	CDS	ACA1_396680	NW_004457640.1	93097	95119	R	encoded by transcript ACA1_396680A; phospholipase A1, putative	complement(join(93097..93300,93439..93949,94051..94343,94449..94468,94580..94720,94816..95119))	Acanthamoeba castellanii str. Neff	14923815
ACA1_396690	CDS	ACA1_396690	NW_004457640.1	95248	99249	R	encoded by transcript ACA1_396690A; ATPdependent DNA helicase ii, 70 kDa subunit (ku70) superfamily protein	complement(join(95248..95412,95450..95815,96043..96146,96417..96500,96646..96757,96924..97052,97154..97350,97381..97469,97638..97702,97857..98015,98344..98446,98551..98639,98663..98700,98732..98831,98923..99052,99242..99249))	Acanthamoeba castellanii str. Neff	14923816
ACA1_396700	CDS	ACA1_396700	NW_004457640.1	100753	103388	D	encoded by transcript ACA1_396700A; phenylalanine-tRNA ligase	join(100753..101070,101224..101377,101394..101643,101800..102089,102317..102371,102394..102506,102634..102810,102931..103123,103235..103388)	Acanthamoeba castellanii str. Neff	14923817
ACA1_396710	CDS	ACA1_396710	NW_004457640.1	103832	107119	R	encoded by transcript ACA1_396710A; GTPaseactivator protein for Ras-like GTPase	complement(join(103832..104221,104349..104507,104704..104861,104958..105168,105328..105573,105717..105818,105918..106306,106439..106981,107050..107119))	Acanthamoeba castellanii str. Neff	14923818
ACA1_396720	CDS	ACA1_396720	NW_004457640.1	107303	108054	D	encoded by transcript ACA1_396720A; mitochondrial protein 18 kDa, putative	join(107303..107324,107396..107562,107662..108054)	Acanthamoeba castellanii str. Neff	14923819
ACA1_396730	CDS	ACA1_396730	NW_004457640.1	108162	111780	D	encoded by transcript ACA1_396730A; golgi family protein, putative	join(108162..108422,108508..108623,108880..109062,109211..109378,109602..109813,109918..110114,110212..110354,110523..110598,110835..111014,111117..111209,111271..111339,111421..111540,111613..111780)	Acanthamoeba castellanii str. Neff	14923820
ACA1_396740	CDS	ACA1_396740	NW_004457640.1	111866	113672	R	encoded by transcript ACA1_396740A; uncharacterized protein	complement(join(111866..112032,112143..112235,112328..112349,112436..112528,112701..113672))	Acanthamoeba castellanii str. Neff	14923821
ACA1_396750	CDS	ACA1_396750	NW_004457640.1	113988	117775	D	encoded by transcript ACA1_396750A; glutaredoxin, putative	join(113988..114045,114112..114202,114601..114733,114917..114997,115121..115266,115438..115533,115594..115777,115964..116003,116159..116256,116274..116450,116671..116704,116956..117189,117317..117510,117629..117775)	Acanthamoeba castellanii str. Neff	14923822
ACA1_396760	CDS	ACA1_396760	NW_004457640.1	118490	131726	D	encoded by transcript ACA1_396760A; regulator of chromosome condensation (RCC1) repeat domain containing protein	join(118490..118501,118666..118796,118947..119045,119189..119315,119469..119582,119738..119836,119907..119995,120105..120282,120489..120569,120692..120811,121040..121126,121270..121358,121654..121746,122025..122186,122354..122444,122651..122763,122967..123114,123254..123337,123457..124054,124968..125109,125337..125427,125808..125880,126013..126151,126304..126866,127024..127073,127102..127173,127223..127382,127503..127622,127876..128066,128183..128315,128552..128741,129028..129101,129282..129709,129910..130235,130361..130782,130861..130979,131199..131726)	Acanthamoeba castellanii str. Neff	14923823
ACA1_396870	CDS	ACA1_396870	NW_004457640.1	131928	134415	D	encoded by transcript ACA1_396870A; uncharacterized protein	join(131928..132116,132507..132704,132999..133078,133142..133518,133602..133716,133800..133985,134058..134415)	Acanthamoeba castellanii str. Neff	14923824
ACA1_396880	CDS	ACA1_396880	NW_004457640.1	138336	140283	D	encoded by transcript ACA1_396880A; uncharacterized protein	join(138336..138434,138590..138748,138988..139067,139205..139316,139390..139578,139663..139779,139874..139915,140110..140283)	Acanthamoeba castellanii str. Neff	14923825
ACA1_396890	CDS	ACA1_396890	NW_004457640.1	141619	142058	D	encoded by transcript ACA1_396890A; uncharacterized protein	join(141619..141660,141777..142058)	Acanthamoeba castellanii str. Neff	14923826
ACA1_396900	CDS	ACA1_396900	NW_004457640.1	142917	144827	D	encoded by transcript ACA1_396900A; uncharacterized protein	join(142917..142945,143044..143116,143166..143225,143342..143423,143505..143600,143694..143774,143871..143971,144052..144210,144391..144451,144754..144827)	Acanthamoeba castellanii str. Neff	14923827
ACA1_396910	CDS	ACA1_396910	NW_004457640.1	145591	148739	R	encoded by transcript ACA1_396910A; uncharacterized protein	complement(join(145591..145836,145958..146102,146283..146361,146497..146558,146710..146782,146952..147028,147309..147379,147507..147608,147672..147838,147995..148121,148287..148549,148661..148739))	Acanthamoeba castellanii str. Neff	14923828
ACA1_396920	CDS	ACA1_396920	NW_004457640.1	149007	150132	R	encoded by transcript ACA1_396920A; guanylate kinase	complement(join(149007..149139,149282..149436,149524..149638,149848..149923,150033..150132))	Acanthamoeba castellanii str. Neff	14923829
ACA1_396930	CDS	ACA1_396930	NW_004457640.1	150570	152451	D	encoded by transcript ACA1_396930A; uncharacterized protein	join(150570..150650,150881..151004,151198..151322,151473..151602,151745..152451)	Acanthamoeba castellanii str. Neff	14923830
ACA1_396940	CDS	ACA1_396940	NW_004457640.1	152630	154719	R	encoded by transcript ACA1_396940A; OST3 / OST6 family protein	complement(join(152630..152680,152879..153073,153201..153341,153497..153575,153751..153824,154044..154158,154349..154536,154666..154719))	Acanthamoeba castellanii str. Neff	14923831
ACA1_396950	CDS	ACA1_396950	NW_004457640.1	155141	155521	D	encoded by transcript ACA1_396950A; profilin, putative	155141..155521	Acanthamoeba castellanii str. Neff	14923832
ACA1_396960	CDS	ACA1_396960	NW_004457640.1	155982	156804	D	encoded by transcript ACA1_396960A; DnaJ domain containing protein	join(155982..156329,156427..156804)	Acanthamoeba castellanii str. Neff	14923833
ACA1_396970	CDS	ACA1_396970	NW_004457640.1	156873	161468	R	encoded by transcript ACA1_396970A; mRNA capping enzyme, large subunit	complement(join(156873..157069,157143..157303,157398..157495,157661..157730,157802..157879,157976..158071,158490..158736,158799..158872,158939..159069,159139..159173,159330..159494,159563..159667,159701..159758,159820..159895,159924..159962,160013..160131,160237..160296,160373..160477,160666..160740,160808..160942,161019..161468))	Acanthamoeba castellanii str. Neff	14923834
ACA1_397180	CDS	ACA1_397180	NW_004457640.1	163490	167408	R	encoded by transcript ACA1_397180A; uncharacterized protein	complement(join(163490..163589,163669..163759,164034..164159,164248..164323,164431..164558,164636..164727,164801..164907,164993..165084,165170..165278,165350..165490,165574..165710,165822..165904,165980..166065,166172..166301,166383..166455,166541..166697,166829..166987,167082..167166,167246..167346,167382..167408))	Acanthamoeba castellanii str. Neff	14923835
ACA1_397190	CDS	ACA1_397190	NW_004457640.1	167791	169704	D	encoded by transcript ACA1_397190A; Ser/Thr phosphatase family superfamily protein	join(167791..167925,168045..168159,168238..168316,168389..168448,168532..168713,168807..168988,169063..169163,169243..169363,169447..169527,169612..169704)	Acanthamoeba castellanii str. Neff	14923836
ACA1_397200	CDS	ACA1_397200	NW_004457640.1	169898	170970	R	encoded by transcript ACA1_397200A; phospholipase, patatin family protein	complement(join(169898..170042,170130..170358,170436..170832,170905..170970))	Acanthamoeba castellanii str. Neff	14923837
ACA1_397210	CDS	ACA1_397210	NW_004457640.1	171563	171957	R	encoded by transcript ACA1_397210A; uncharacterized protein	complement(join(171563..171614,171722..171836,171915..171957))	Acanthamoeba castellanii str. Neff	14923838
ACA1_397220	CDS	ACA1_397220	NW_004457640.1	172010	172617	R	encoded by transcript ACA1_397220A; uncharacterized protein	complement(join(172010..172096,172187..172309,172417..>172617))	Acanthamoeba castellanii str. Neff	14923839
ACA1_397230	CDS	ACA1_397230	NW_004457640.1	173035	174272	D	encoded by transcript ACA1_397230A; uncharacterized protein	join(173035..173350,173440..173631,173718..173886,173972..174272)	Acanthamoeba castellanii str. Neff	14923840
ACA1_397240	CDS	ACA1_397240	NW_004457640.1	174388	174762	D	encoded by transcript ACA1_397240A; uncharacterized protein	join(174388..174706,174755..174762)	Acanthamoeba castellanii str. Neff	14923841
ACA1_397250	CDS	ACA1_397250	NW_004457640.1	175582	176639	D	encoded by transcript ACA1_397250A; enhanced disease resistance 1, putative	join(175582..175685,175892..176016,176093..176473,176537..176556,176619..176639)	Acanthamoeba castellanii str. Neff	14923842
ACA1_397260	CDS	ACA1_397260	NW_004457640.1	177764	178481	R	encoded by transcript ACA1_397260A; Sel1 domain containing protein	complement(join(177764..178219,178237..178282,178360..178481))	Acanthamoeba castellanii str. Neff	14923843
ACA1_397270	CDS	ACA1_397270	NW_004457640.1	178700	180889	D	encoded by transcript ACA1_397270A; F-box domain containing protein	join(178700..179311,179418..179588,179686..179799,179842..179879,179958..180124,180245..180436,180539..180635,180709..180889)	Acanthamoeba castellanii str. Neff	14923844
ACA1_397280	CDS	ACA1_397280	NW_004457640.1	181032	184690	D	encoded by transcript ACA1_397280A; uncharacterized protein	join(181032..181224,182411..182544,182637..182789,182880..183114,183220..183394,184273..184359,184459..184690)	Acanthamoeba castellanii str. Neff	14923845
ACA1_397490	CDS	ACA1_397490	NW_004457640.1	184835	185125	D	encoded by transcript ACA1_397490A; uncharacterized protein	184835..185125	Acanthamoeba castellanii str. Neff	14923846
ACA1_397500	CDS	ACA1_397500	NW_004457640.1	186258	187087	R	encoded by transcript ACA1_397500A; EGF family domain containing protein, putative	complement(join(186258..186845,187025..187087))	Acanthamoeba castellanii str. Neff	14923847
ACA1_397510	CDS	ACA1_397510	NW_004457640.1	188765	189352	D	encoded by transcript ACA1_397510A; Group-specific protein	join(188765..189023,189045..189352)	Acanthamoeba castellanii str. Neff	14923848
ACA1_397520	CDS	ACA1_397520	NW_004457640.1	191343	192842	R	encoded by transcript ACA1_397520A; uncharacterized protein	complement(join(191343..191949,191969..192139,192214..192520,192669..192717,192798..192842))	Acanthamoeba castellanii str. Neff	14923849
ACA1_397630	CDS	ACA1_397630	NW_004457640.1	193251	193603	D	encoded by transcript ACA1_397630A; uncharacterized protein	join(193251..193334,193346..193603)	Acanthamoeba castellanii str. Neff	14923850
ACA1_397840	CDS	ACA1_397840	NW_004457640.1	197297	197914	D	encoded by transcript ACA1_397840A; uncharacterized protein	join(197297..197448,197503..197914)	Acanthamoeba castellanii str. Neff	14923851
ACA1_397850	CDS	ACA1_397850	NW_004457640.1	197940	198514	R	encoded by transcript ACA1_397850A; uncharacterized protein	complement(join(197940..197958,198138..198234,198332..198369,198438..198514))	Acanthamoeba castellanii str. Neff	14923852
ACA1_397960	CDS	ACA1_397960	NW_004457640.1	200970	202439	D	encoded by transcript ACA1_397960A; Rab9, putative	join(200970..201074,201208..201331,201460..201612,201721..201876,202124..202183,202258..202439)	Acanthamoeba castellanii str. Neff	14923853
ACA1_398070	CDS	ACA1_398070	NW_004457640.1	206879	207370	R	encoded by transcript ACA1_398070A; acetyltransferase, GNAT superfamily protein	complement(join(206879..207051,207136..207234,207334..207370))	Acanthamoeba castellanii str. Neff	14923854
ACA1_398080	CDS	ACA1_398080	NW_004457640.1	207397	208301	R	encoded by transcript ACA1_398080A; stretchresponsive fibronectin protein type 3, putative	complement(join(207397..207639,207737..207988,208092..208301))	Acanthamoeba castellanii str. Neff	14923855
ACA1_398190	CDS	ACA1_398190	NW_004457640.1	211820	214255	R	encoded by transcript ACA1_398190A; phosphogluconate dehydrogenase (decarboxylating), Cterminal domain containing protein	complement(join(211820..212146,212235..212372,212445..212552,212673..212848,212915..213001,213130..213199,213275..213373,213446..213576,213645..213723,213811..213879,213979..214074,214133..214255))	Acanthamoeba castellanii str. Neff	14923856
ACA1_398200	CDS	ACA1_398200	NW_004457640.1	214599	215054	D	encoded by transcript ACA1_398200A; uncharacterized protein	214599..>215054	Acanthamoeba castellanii str. Neff	14923857
ACA1_398310	CDS	ACA1_398310	NW_004457640.1	218114	218434	R	encoded by transcript ACA1_398310A; uncharacterized protein	complement(join(218114..218164,218231..218434))	Acanthamoeba castellanii str. Neff	14923858
ACA1_398320	CDS	ACA1_398320	NW_004457640.1	219125	220263	D	encoded by transcript ACA1_398320A; uncharacterized protein	join(219125..219313,219427..219518,219705..219900,220009..220263)	Acanthamoeba castellanii str. Neff	14923859
ACA1_398330	CDS	ACA1_398330	NW_004457640.1	220424	222447	R	encoded by transcript ACA1_398330A; amino acid permease	complement(join(220424..220579,220664..220769,220853..220958,221101..221280,221390..221510,221594..221679,221768..221832,221878..221954,222059..222184,222292..>222447))	Acanthamoeba castellanii str. Neff	14923860
ACA1_398440	CDS	ACA1_398440	NW_004457640.1	225119	226863	R	encoded by transcript ACA1_398440A; uncharacterized protein	complement(join(<225119..225214,225318..225494,225605..225728,225853..225987,226082..226213,226331..226863))	Acanthamoeba castellanii str. Neff	14923861
ACA1_398450	CDS	ACA1_398450	NW_004457640.1	227785	230236	R	encoded by transcript ACA1_398450A; uncharacterized protein	complement(join(227785..228433,229121..229290,229376..229558,229819..229892,230197..230236))	Acanthamoeba castellanii str. Neff	14923862
ACA1_398660	CDS	ACA1_398660	NW_004457640.1	232156	234582	R	encoded by transcript ACA1_398660A; nucleolar gtpbinding protein 1, putative	complement(join(232156..232494,232604..232978,233320..233670,233790..233937,234013..234111,234198..234385,234505..234582))	Acanthamoeba castellanii str. Neff	14923863
ACA1_398870	CDS	ACA1_398870	NW_004457640.1	235330	238106	R	encoded by transcript ACA1_398870A; BRCA1associated protein 2 subfamily protein	complement(join(235330..235416,235527..235703,235789..235980,236049..236138,236305..236407,236508..236656,236803..236900,236990..237107,237266..237371,237520..237641,237756..238106))	Acanthamoeba castellanii str. Neff	14923864
ACA1_398880	CDS	ACA1_398880	NW_004457640.1	238278	239755	R	encoded by transcript ACA1_398880A; DNA ligaselike protein	complement(join(238278..238604,238666..238838,238911..238990,239065..239147,239256..239351,239449..239513,239668..239755))	Acanthamoeba castellanii str. Neff	14923865
ACA1_398890	CDS	ACA1_398890	NW_004457640.1	240036	240570	D	encoded by transcript ACA1_398890A; uncharacterized protein	join(240036..240075,240162..240284,240416..240570)	Acanthamoeba castellanii str. Neff	14923866
ACA1_398900	CDS	ACA1_398900	NW_004457640.1	240731	242060	R	encoded by transcript ACA1_398900A; thioredoxindisulfide reductase	complement(join(240731..240945,241029..241276,241379..241605,241702..241937,242021..242060))	Acanthamoeba castellanii str. Neff	14923867
ACA1_398910	CDS	ACA1_398910	NW_004457640.1	242427	248983	R	encoded by transcript ACA1_398910A; phospholipidtranslocating P-type ATPase, flippase subfamily protein	complement(join(242427..242607,242715..242799,242898..242983,243084..243183,243294..243349,243494..243559,243649..243731,243861..243921,244012..244259,244345..244413,244494..244556,244683..244901,244949..245169,245261..245451,245591..245682,245805..246002,246167..246418,246500..246595,246685..246843,247014..247214,247324..247405,247476..247658,247778..247899,248023..248124,248221..248318,248439..248487,248639..248983))	Acanthamoeba castellanii str. Neff	14923868
ACA1_398920	CDS	ACA1_398920	NW_004457640.1	249240	252161	D	encoded by transcript ACA1_398920A; glucosyltransferase	join(249240..249722,249847..249965,250066..250240,250367..250401,250484..250550,250670..250776,250858..250955,251044..251170,251292..251393,251477..251566,251688..251814,251916..252161)	Acanthamoeba castellanii str. Neff	14923869
ACA1_398930	CDS	ACA1_398930	NW_004457640.1	252286	253882	D	encoded by transcript ACA1_398930A; uncharacterized protein	join(252286..252345,252604..252807,252969..253135,253247..253354,253506..253623,253718..253882)	Acanthamoeba castellanii str. Neff	14923870
ACA1_398940	CDS	ACA1_398940	NW_004457640.1	254827	255597	D	encoded by transcript ACA1_398940A; uncharacterized protein	join(254827..254957,255207..255597)	Acanthamoeba castellanii str. Neff	14923871
ACA1_398950	CDS	ACA1_398950	NW_004457640.1	255729	258181	D	encoded by transcript ACA1_398950A; START domain containing protein	join(255729..255875,256008..256427,257530..257949,258077..258181)	Acanthamoeba castellanii str. Neff	14923872
ACA1_399060	CDS	ACA1_399060	NW_004457640.1	258860	259843	D	encoded by transcript ACA1_399060A; homeobox domain containing protein	258860..259843	Acanthamoeba castellanii str. Neff	14923873
ACA1_399070	CDS	ACA1_399070	NW_004457640.1	260742	260978	R	encoded by transcript ACA1_399070A; uncharacterized protein	complement(260742..260978)	Acanthamoeba castellanii str. Neff	14923874
ACA1_399180	CDS	ACA1_399180	NW_004457640.1	261558	262736	R	encoded by transcript ACA1_399180A; IRSp53/MIM domain containing protein	complement(join(261558..261689,261768..262736))	Acanthamoeba castellanii str. Neff	14923875
ACA1_399190	CDS	ACA1_399190	NW_004457640.1	263232	267541	D	encoded by transcript ACA1_399190A; DNA helicase, putative	join(263232..263713,263860..264068,264141..264226,264371..264546,264566..264731,264792..264912,265036..265229,265366..265467,265556..265657,265767..265933,266077..266186,266317..266416,266527..267541)	Acanthamoeba castellanii str. Neff	14923876
ACA1_399200	CDS	ACA1_399200	NW_004457640.1	267829	272589	R	encoded by transcript ACA1_399200A; uncharacterized protein	complement(join(267829..267892,267977..268111,268190..268761,268884..269208,269334..269573,269667..269871,269968..270197,270372..270590,270678..270927,271029..271147,271249..271418,271513..272589))	Acanthamoeba castellanii str. Neff	14923877
ACA1_399210	CDS	ACA1_399210	NW_004457640.1	273427	275205	D	encoded by transcript ACA1_399210A; tetratricopeptide repeat domain containing protein	join(273427..273603,273695..273836,273939..274014,274159..274228,274318..274503,274589..274837,274963..275205)	Acanthamoeba castellanii str. Neff	14923878
ACA1_399220	CDS	ACA1_399220	NW_004457640.1	275288	277036	D	encoded by transcript ACA1_399220A; MORN repeat-containing protein	join(275288..275397,275509..275591,275668..276254,276366..276543,276651..277036)	Acanthamoeba castellanii str. Neff	14923879
ACA1_399230	CDS	ACA1_399230	NW_004457640.1	277161	278364	D	encoded by transcript ACA1_399230A; synaptobrevin protein	join(277161..277321,277406..277464,277529..277602,277690..277752,277860..277977,278035..278207,278305..278364)	Acanthamoeba castellanii str. Neff	14923880
ACA1_399240	CDS	ACA1_399240	NW_004457640.1	278616	280960	D	encoded by transcript ACA1_399240A; saccharopine dehydrogenase Lys1, putative	join(278616..278858,278923..278994,279067..279138,279281..279360,279459..279552,279684..279839,279939..280027,280122..280409,280439..280606,280721..280778,280877..280960)	Acanthamoeba castellanii str. Neff	14923881
ACA1_399250	CDS	ACA1_399250	NW_004457640.1	281168	281574	D	encoded by transcript ACA1_399250A; uncharacterized protein	join(281168..281487,281544..281574)	Acanthamoeba castellanii str. Neff	14923882
ACA1_399260	CDS	ACA1_399260	NW_004457640.1	281618	282783	D	encoded by transcript ACA1_399260A; uncharacterized protein	join(281618..281795,281914..282005,282115..282783)	Acanthamoeba castellanii str. Neff	14923883
ACA1_148440	CDS	ACA1_148440	NW_004457638.1	3593	5103	D	encoded by transcript ACA1_148440A; metal cation transporter, ZIP subfamily protein	join(3593..3665,3745..3896,3971..4126,4223..4308,4455..4553,4615..4739,4832..4902,5017..5103)	Acanthamoeba castellanii str. Neff	14923782
ACA1_148450	CDS	ACA1_148450	NW_004457638.1	5207	5530	R	encoded by transcript ACA1_148450A; uncharacterized protein	complement(5207..5530)	Acanthamoeba castellanii str. Neff	14923683
ACA1_148460	CDS	ACA1_148460	NW_004457638.1	5754	7479	R	encoded by transcript ACA1_148460A; uncharacterized protein	complement(join(5754..5782,5880..5910,5998..6067,6181..6273,6373..6452,6598..6674,6786..6907,7013..7109,7251..7479))	Acanthamoeba castellanii str. Neff	14923676
ACA1_148470	CDS	ACA1_148470	NW_004457638.1	7738	8497	D	encoded by transcript ACA1_148470A; uncharacterized protein	join(7738..8168,8326..8497)	Acanthamoeba castellanii str. Neff	14923677
ACA1_148480	CDS	ACA1_148480	NW_004457638.1	8852	11310	R	encoded by transcript ACA1_148480A; I/LWEQ domain containing protein	complement(join(8852..10372,10618..10674,10769..10885,11005..11310))	Acanthamoeba castellanii str. Neff	14923678
ACA1_148490	CDS	ACA1_148490	NW_004457638.1	11893	15058	R	encoded by transcript ACA1_148490A; pentatricopeptide repeat domain containing protein	complement(join(11893..12573,12705..13991,14087..14220,14302..14412,14572..14588,14746..14902,15006..15034,15054..15058))	Acanthamoeba castellanii str. Neff	14923679
ACA1_148500	CDS	ACA1_148500	NW_004457638.1	15341	18000	D	encoded by transcript ACA1_148500A; uncharacterized protein	join(15341..15392,15464..15531,15600..15661,15788..15866,15981..16091,16278..16428,16506..16679,16743..16921,17017..17163,17267..17413,17507..17587,17714..17784,17868..18000)	Acanthamoeba castellanii str. Neff	14923680
ACA1_148510	CDS	ACA1_148510	NW_004457638.1	18301	19628	D	encoded by transcript ACA1_148510A; malate/Llactate dehydrogenase subfamily protein	join(18301..18658,18763..18858,18939..19043,19086..19134,19246..19388,19498..19628)	Acanthamoeba castellanii str. Neff	14923681
ACA1_148520	CDS	ACA1_148520	NW_004457638.1	20049	26768	D	encoded by transcript ACA1_148520A; TBC domain containing protein	join(20049..20660,20821..20950,21086..21219,21310..21449,21598..22200,22351..22493,22590..23131,23261..23348,23449..23532,23677..23791,23939..24136,24251..24321,24444..24601,24697..24819,24988..25107,25203..25306,25396..26606,26683..26768)	Acanthamoeba castellanii str. Neff	14923682
ACA1_148530	CDS	ACA1_148530	NW_004457638.1	26889	29102	R	encoded by transcript ACA1_148530A; zinc knuckle domain containing protein	complement(join(26889..27725,27819..28070,28295..28402,28492..28605,28687..28885,28939..29102))	Acanthamoeba castellanii str. Neff	14923684
ACA1_148540	CDS	ACA1_148540	NW_004457638.1	29442	30220	D	encoded by transcript ACA1_148540A; transmembrane protein 18, putative	join(29442..29721,29837..29985,30125..30220)	Acanthamoeba castellanii str. Neff	14923685
ACA1_148550	CDS	ACA1_148550	NW_004457638.1	30444	33336	D	encoded by transcript ACA1_148550A; AMPbinding enzyme domain containing protein	join(30444..30567,30644..30727,30807..30881,31282..31497,31554..31620,31746..31843,31935..32054,32120..32269,32354..32478,32559..32868,32945..33336)	Acanthamoeba castellanii str. Neff	14923686
ACA1_148660	CDS	ACA1_148660	NW_004457638.1	33429	34571	R	encoded by transcript ACA1_148660A; uncharacterized protein	complement(join(33429..33819,33886..34017,34156..34342,34406..34571))	Acanthamoeba castellanii str. Neff	14923687
ACA1_148670	CDS	ACA1_148670	NW_004457638.1	35032	36421	R	encoded by transcript ACA1_148670A; uncharacterized protein	complement(join(35032..35274,35359..35562,35644..35879,35983..>36421))	Acanthamoeba castellanii str. Neff	14923688
ACA1_148780	CDS	ACA1_148780	NW_004457638.1	42474	44374	R	encoded by transcript ACA1_148780A; uncharacterized protein	complement(join(42474..42716,42796..42860,43031..44010,44157..44238,44335..44374))	Acanthamoeba castellanii str. Neff	14923689
ACA1_148890	CDS	ACA1_148890	NW_004457638.1	45237	45488	D	encoded by transcript ACA1_148890A; uncharacterized protein	join(45237..45312,45391..45488)	Acanthamoeba castellanii str. Neff	14923690
ACA1_149000	CDS	ACA1_149000	NW_004457638.1	47258	48825	D	encoded by transcript ACA1_149000A; silent information regulator protein Sir2, putative	join(47258..47387,47465..47533,47609..47686,47764..47841,47914..48078,48160..48326,48414..48544,48666..48825)	Acanthamoeba castellanii str. Neff	14923691
ACA1_149010	CDS	ACA1_149010	NW_004457638.1	49349	50776	D	encoded by transcript ACA1_149010A; rapid response to glucose protein 1, putative	join(49349..49649,49791..50776)	Acanthamoeba castellanii str. Neff	14923692
ACA1_149020	CDS	ACA1_149020	NW_004457638.1	51568	52308	D	encoded by transcript ACA1_149020A; uncharacterized protein	51568..52308	Acanthamoeba castellanii str. Neff	14923693
ACA1_149030	CDS	ACA1_149030	NW_004457638.1	52782	54517	D	encoded by transcript ACA1_149030A; thioredoxin domain containing protein	join(52782..53152,53217..53334,53388..53559,53641..53796,53868..53929,54019..54266,54394..54517)	Acanthamoeba castellanii str. Neff	14923694
ACA1_149040	CDS	ACA1_149040	NW_004457638.1	54624	56749	R	encoded by transcript ACA1_149040A; CUE domain containing protein	complement(join(54624..55004,55072..55273,55382..55446,55543..55702,55809..55970,56098..56235,56376..56749))	Acanthamoeba castellanii str. Neff	14923695
ACA1_149050	CDS	ACA1_149050	NW_004457638.1	57159	58024	D	encoded by transcript ACA1_149050A; ankyrin repeat-containing protein	join(57159..57788,57911..58024)	Acanthamoeba castellanii str. Neff	14923696
ACA1_149060	CDS	ACA1_149060	NW_004457638.1	58390	59606	D	encoded by transcript ACA1_149060A; uncharacterized protein	join(58390..58516,58592..58852,58992..59151,59246..59606)	Acanthamoeba castellanii str. Neff	14923697
ACA1_149070	CDS	ACA1_149070	NW_004457638.1	59926	60329	R	encoded by transcript ACA1_149070A; uncharacterized protein	complement(join(59926..60249,60270..60329))	Acanthamoeba castellanii str. Neff	14923698
ACA1_149080	CDS	ACA1_149080	NW_004457638.1	61633	62971	D	encoded by transcript ACA1_149080A; uncharacterized protein	join(61633..61668,61768..62108,62161..62386,62439..62645,62690..62971)	Acanthamoeba castellanii str. Neff	14923699
ACA1_149090	CDS	ACA1_149090	NW_004457638.1	65524	67365	R	encoded by transcript ACA1_149090A; betamannosidase	complement(join(65524..65705,65855..66065,66240..66385,66479..66752,66856..67074,67195..67365))	Acanthamoeba castellanii str. Neff	14923700
ACA1_149110	CDS	ACA1_149110	NW_004457638.1	73809	75310	D	encoded by transcript ACA1_149110A; uncharacterized protein	join(73809..73982,74093..74398,74819..75064,75179..75310)	Acanthamoeba castellanii str. Neff	14923702
ACA1_149120	CDS	ACA1_149120	NW_004457638.1	75438	77046	R	encoded by transcript ACA1_149120A; ribosomal protein L11 methyltransferase	complement(join(75438..75533,75618..76066,76147..76239,76322..76520,76603..76710,76813..77046))	Acanthamoeba castellanii str. Neff	14923703
ACA1_149130	CDS	ACA1_149130	NW_004457638.1	78648	81328	D	encoded by transcript ACA1_149130A; glucan 1,4-alpha-glucosidase	join(78648..78949,79128..79225,79528..80183,80362..80484,80609..80740,80939..81070,81158..81328)	Acanthamoeba castellanii str. Neff	14923704
ACA1_149140	CDS	ACA1_149140	NW_004457638.1	81759	83569	D	encoded by transcript ACA1_149140A; uncharacterized protein	join(81759..81809,81914..82038,82238..82386,82472..82557,82672..82798,82912..83409,83529..83569)	Acanthamoeba castellanii str. Neff	14923705
ACA1_149150	CDS	ACA1_149150	NW_004457638.1	83675	84852	R	encoded by transcript ACA1_149150A; GATA zinc finger domain containing protein	complement(join(83675..83858,83929..84401,84673..84852))	Acanthamoeba castellanii str. Neff	14923706
ACA1_149160	CDS	ACA1_149160	NW_004457638.1	86035	87816	D	encoded by transcript ACA1_149160A; MYND finger domain containing protein	join(<86035..86094,86329..86627,86703..86832,86962..87012,87164..87247,87362..87536,87653..87816)	Acanthamoeba castellanii str. Neff	14923707
ACA1_149170	CDS	ACA1_149170	NW_004457638.1	89982	90878	D	encoded by transcript ACA1_149170A; selT/selW/selH selenoprotein domain containing protein	join(89982..90057,90580..90726,90802..90878)	Acanthamoeba castellanii str. Neff	14923708
ACA1_149180	CDS	ACA1_149180	NW_004457638.1	91262	92617	D	encoded by transcript ACA1_149180A; methyltransferase domain containing protein	join(91262..91393,91472..91556,91655..91860,91955..92097,92218..92294,92400..92617)	Acanthamoeba castellanii str. Neff	14923709
ACA1_149190	CDS	ACA1_149190	NW_004457638.1	92684	94266	D	encoded by transcript ACA1_149190A; myoinositol monophosphatase 1, putative	join(92684..92840,93057..93136,93299..93384,93520..93584,93687..93771,93879..94027,94139..94266)	Acanthamoeba castellanii str. Neff	14923710
ACA1_149200	CDS	ACA1_149200	NW_004457638.1	94563	96778	D	encoded by transcript ACA1_149200A; PHprotein kinase domain containing protein	join(94563..94706,94802..94963,94978..95053,95125..95192,95292..95499,95571..95688,95791..95924,96011..96099,96230..96286,96369..96521,96611..96778)	Acanthamoeba castellanii str. Neff	14923711
ACA1_149210	CDS	ACA1_149210	NW_004457638.1	96956	100896	R	encoded by transcript ACA1_149210A; uncharacterized protein	complement(join(96956..97054,97093..97145,97247..97646,97681..98277,98387..99058,99178..99334,99416..99574,99725..99981,100071..100172,100320..100403,100516..100896))	Acanthamoeba castellanii str. Neff	14923712
ACA1_149220	CDS	ACA1_149220	NW_004457638.1	101330	101903	D	encoded by transcript ACA1_149220A; Sas10 Cterminal domain containing protein	join(101330..101460,101621..101903)	Acanthamoeba castellanii str. Neff	14923713
ACA1_149230	CDS	ACA1_149230	NW_004457638.1	102009	103305	R	encoded by transcript ACA1_149230A; uncharacterized protein	complement(join(102009..102250,102375..102433,102570..102670,102786..102917,103039..103145,103236..103305))	Acanthamoeba castellanii str. Neff	14923714
ACA1_149240	CDS	ACA1_149240	NW_004457638.1	103949	111284	D	encoded by transcript ACA1_149240A; peptidase, S8/S53 subfamily protein	join(103949..104116,104242..104401,104548..104608,104751..104854,105010..105279,105395..105472,105543..105605,105750..105868,106003..106080,106181..106254,106387..106453,106625..106723,106799..107022,107177..107255,107341..107428,107531..107692,107807..107924,108050..108139,108250..108373,108533..108646,108754..108840,108980..109083,109165..109238,109365..109506,109615..109739,109855..110141,110245..110319,110415..110502,110594..110725,110834..110985,111111..111284)	Acanthamoeba castellanii str. Neff	14923715
ACA1_149250	CDS	ACA1_149250	NW_004457638.1	111505	112231	D	encoded by transcript ACA1_149250A; uncharacterized protein	join(111505..111895,111975..112011,112114..112231)	Acanthamoeba castellanii str. Neff	14923716
ACA1_149260	CDS	ACA1_149260	NW_004457638.1	112409	113191	R	encoded by transcript ACA1_149260A; actinrelated protein ARPC3, putative	complement(join(112409..112551,112723..112989,113119..113191))	Acanthamoeba castellanii str. Neff	14923717
ACA1_149270	CDS	ACA1_149270	NW_004457638.1	115415	117208	D	encoded by transcript ACA1_149270A; MIF4G domain containing protein	115415..117208	Acanthamoeba castellanii str. Neff	14923718
ACA1_149280	CDS	ACA1_149280	NW_004457638.1	118041	118487	D	encoded by transcript ACA1_149280A; uncharacterized protein	join(118041..118358,118473..118487)	Acanthamoeba castellanii str. Neff	14923719
ACA1_149290	CDS	ACA1_149290	NW_004457638.1	119876	122911	D	encoded by transcript ACA1_149290A; Ankyrin repeatcontaining protein	join(119876..120391,120442..120720,120736..120829,121278..121425,121521..121646,121732..121835,121957..122129,122208..122339,122420..122519,122607..122911)	Acanthamoeba castellanii str. Neff	14923720
ACA1_149300	CDS	ACA1_149300	NW_004457638.1	123308	124678	R	encoded by transcript ACA1_149300A; cyclin, Nterminal domain containing protein	complement(join(123308..123451,123535..123767,123846..123972,124100..124192,124298..124394,124476..124678))	Acanthamoeba castellanii str. Neff	14923721
ACA1_149310	CDS	ACA1_149310	NW_004457638.1	125150	125578	R	encoded by transcript ACA1_149310A; MAPEG domain containing protein	complement(125150..125578)	Acanthamoeba castellanii str. Neff	14923722
ACA1_149320	CDS	ACA1_149320	NW_004457638.1	125863	129554	D	encoded by transcript ACA1_149320A; uncharacterized protein	join(125863..126075,126169..126632,126738..126819,126965..127066,127208..127285,127372..127927,128018..128100,128227..128313,128429..128917,129082..129202,129292..129305,129381..129554)	Acanthamoeba castellanii str. Neff	14923723
ACA1_149330	CDS	ACA1_149330	NW_004457638.1	129670	130789	R	encoded by transcript ACA1_149330A; GATA zinc finger domain containing protein	complement(join(129670..130027,130110..130789))	Acanthamoeba castellanii str. Neff	14923724
ACA1_149340	CDS	ACA1_149340	NW_004457638.1	132080	132685	D	encoded by transcript ACA1_149340A; uncharacterized protein	join(132080..132195,132284..132312,132396..132685)	Acanthamoeba castellanii str. Neff	14923725
ACA1_149350	CDS	ACA1_149350	NW_004457638.1	132750	134326	D	encoded by transcript ACA1_149350A; phosphatidate cytidylyltransferase	join(132750..132834,132920..133109,133196..133266,133364..133588,133683..133804,133910..134046,134095..134326)	Acanthamoeba castellanii str. Neff	14923726
ACA1_149360	CDS	ACA1_149360	NW_004457638.1	134397	135465	D	encoded by transcript ACA1_149360A; CDPalcohol phosphatidyltransferase	join(134397..134757,134856..134932,135003..135084,135190..135267,135362..135465)	Acanthamoeba castellanii str. Neff	14923727
ACA1_149370	CDS	ACA1_149370	NW_004457638.1	135944	136906	R	encoded by transcript ACA1_149370A; uncharacterized protein	complement(135944..136906)	Acanthamoeba castellanii str. Neff	14923728
ACA1_149380	CDS	ACA1_149380	NW_004457638.1	138043	139242	D	encoded by transcript ACA1_149380A; ribose 5phosphate isomerase A, putative	join(138043..138329,138434..138554,138662..138785,138887..139069,139181..139242)	Acanthamoeba castellanii str. Neff	14923729
ACA1_149390	CDS	ACA1_149390	NW_004457638.1	139296	141929	R	encoded by transcript ACA1_149390A; uncharacterized protein	complement(join(139296..139371,139474..139633,139690..139908,139996..140157,140241..140387,140469..140590,140733..140992,141136..141250,141341..141457,141601..141704,141771..141929))	Acanthamoeba castellanii str. Neff	14923730
ACA1_149400	CDS	ACA1_149400	NW_004457638.1	142351	144098	D	encoded by transcript ACA1_149400A; transport protein Sec61 alpha subunit, putative	join(142351..142389,142470..142749,142894..143856,143992..144098)	Acanthamoeba castellanii str. Neff	14923731
ACA1_149410	CDS	ACA1_149410	NW_004457638.1	144338	148351	D	encoded by transcript ACA1_149410A; Filamin repeat domain containing protein	join(144338..144446,144525..144654,144757..144991,145104..145265,145398..145560,145666..145848,145990..146187,146352..146648,146706..147065,147174..147302,147399..147591,147679..147881,147970..148119,148215..148351)	Acanthamoeba castellanii str. Neff	14923732
ACA1_149420	CDS	ACA1_149420	NW_004457638.1	148546	149838	R	encoded by transcript ACA1_149420A; ribosomal protein L10, putative	complement(join(148546..148731,148833..149061,149185..149243,149370..149623,149811..149838))	Acanthamoeba castellanii str. Neff	14923733
ACA1_149430	CDS	ACA1_149430	NW_004457638.1	150352	152096	D	encoded by transcript ACA1_149430A; uncharacterized protein	join(150352..150971,151093..151478,151584..151656,151834..151936,152040..152096)	Acanthamoeba castellanii str. Neff	14923734
ACA1_149440	CDS	ACA1_149440	NW_004457638.1	152635	154008	D	encoded by transcript ACA1_149440A; uncharacterized protein	join(152635..152889,152981..153281,153379..153641,153750..153777,153812..154008)	Acanthamoeba castellanii str. Neff	14923735
ACA1_149450	CDS	ACA1_149450	NW_004457638.1	154256	155742	R	encoded by transcript ACA1_149450A; translation elongation factor Ts, putative	complement(join(154256..154480,154686..154883,155067..155222,155341..155742))	Acanthamoeba castellanii str. Neff	14923736
ACA1_149460	CDS	ACA1_149460	NW_004457638.1	155879	156428	D	encoded by transcript ACA1_149460A; LSM domain containing protein	join(155879..156026,156088..156203,156285..156428)	Acanthamoeba castellanii str. Neff	14923737
ACA1_149470	CDS	ACA1_149470	NW_004457638.1	156675	157221	D	encoded by transcript ACA1_149470A; uncharacterized protein	join(156675..156696,156824..157221)	Acanthamoeba castellanii str. Neff	14923738
ACA1_149480	CDS	ACA1_149480	NW_004457638.1	157578	159285	D	encoded by transcript ACA1_149480A; bZIP transcription factor domain containing protein	join(157578..157984,157995..158038,158285..159285)	Acanthamoeba castellanii str. Neff	14923739
ACA1_149490	CDS	ACA1_149490	NW_004457638.1	159492	160791	D	encoded by transcript ACA1_149490A; biotin/lipoate A/B protein ligase domain containing protein	join(159492..159621,159771..160054,160272..160416,160595..160791)	Acanthamoeba castellanii str. Neff	14923740
ACA1_149500	CDS	ACA1_149500	NW_004457638.1	160941	162695	R	encoded by transcript ACA1_149500A; DHHC zinc finger domain containing protein	complement(join(160941..161058,161219..161323,161461..161560,161691..161816,161958..162012,162187..162234,162384..162529,162626..162695))	Acanthamoeba castellanii str. Neff	14923741
ACA1_149510	CDS	ACA1_149510	NW_004457638.1	162951	168856	D	encoded by transcript ACA1_149510A; WD domain, G-beta repeat-containing protein	join(162951..162987,163074..163136,163237..163506,163739..163926,164200..164309,164398..164536,164661..164736,164877..165052,165180..165562,165694..165732,165852..165873,166115..166364,166574..166693,166878..166997,167401..167558,167800..167871,167964..168064,168235..168298,168500..168659,168708..168856)	Acanthamoeba castellanii str. Neff	14923742
ACA1_149520	CDS	ACA1_149520	NW_004457638.1	169021	171741	D	encoded by transcript ACA1_149520A; WD domain, Gbeta repeat-containing protein	join(169021..169384,169761..170470,170636..171394,171547..171741)	Acanthamoeba castellanii str. Neff	14923743
ACA1_149530	CDS	ACA1_149530	NW_004457638.1	172551	176557	R	encoded by transcript ACA1_149530A; elongation factor Tu GTP binding domain containing protein	complement(join(172551..173317,173445..173708,173879..173966,174127..174140,174173..174250,174536..174962,175192..175877,176068..176214,176309..176376,176487..176557))	Acanthamoeba castellanii str. Neff	14923744
ACA1_149540	CDS	ACA1_149540	NW_004457638.1	176869	177821	D	encoded by transcript ACA1_149540A; vacuolar protein sorting	join(176869..176960,177058..177138,177212..177339,177419..177600,177672..177821)	Acanthamoeba castellanii str. Neff	14923745
ACA1_149550	CDS	ACA1_149550	NW_004457638.1	180383	187483	R	encoded by transcript ACA1_149550A; Rap/ran-GAP protein	complement(join(180383..180900,181265..181455,181708..181804,182110..182199,182512..183189,183351..183441,183613..183675,183787..183865,184085..184146,184393..184458,184566..184664,184822..184872,184989..185235,185461..185533,185755..185883,186016..186122,186299..186396,186804..186905,187035..187166,187463..187483))	Acanthamoeba castellanii str. Neff	14923746
ACA1_149760	CDS	ACA1_149760	NW_004457638.1	189012	189766	R	encoded by transcript ACA1_149760A; uncharacterized protein	complement(join(189012..189176,189683..189766))	Acanthamoeba castellanii str. Neff	14923747
ACA1_149770	CDS	ACA1_149770	NW_004457638.1	192901	193936	R	encoded by transcript ACA1_149770A; uncharacterized protein	complement(join(192901..192943,193338..193423,193566..193639,193810..193936))	Acanthamoeba castellanii str. Neff	14923748
ACA1_149780	CDS	ACA1_149780	NW_004457638.1	197069	197215	D	encoded by transcript ACA1_149780A; uncharacterized protein	197069..197215	Acanthamoeba castellanii str. Neff	14923749
ACA1_149790	CDS	ACA1_149790	NW_004457638.1	199265	199696	R	encoded by transcript ACA1_149790A; uncharacterized protein	complement(join(199265..199330,199354..199571,199621..199661,199689..199696))	Acanthamoeba castellanii str. Neff	14923750
ACA1_149800	CDS	ACA1_149800	NW_004457638.1	203274	205313	R	encoded by transcript ACA1_149800A; tetratricopeptide repeat domain containing protein	complement(join(203274..203681,203790..203958,204073..204250,204324..204444,204538..204642,204766..204884,204967..205030,205131..205313))	Acanthamoeba castellanii str. Neff	14923751
ACA1_149810	CDS	ACA1_149810	NW_004457638.1	206258	209603	D	encoded by transcript ACA1_149810A; DNA mismatch repair protein, Cterminal domain containing protein	join(206258..206394,206479..206595,206673..206728,206787..206892,206983..207091,207181..207231,207326..207429,207519..207572,207678..207773,207853..208798,208890..209067,209164..209348,209451..209603)	Acanthamoeba castellanii str. Neff	14923752
ACA1_149820	CDS	ACA1_149820	NW_004457638.1	209776	210390	R	encoded by transcript ACA1_149820A; ribosomal protein L49, putative	complement(join(209776..209916,210120..210280,210336..210390))	Acanthamoeba castellanii str. Neff	14923753
ACA1_149830	CDS	ACA1_149830	NW_004457638.1	210602	212250	D	encoded by transcript ACA1_149830A; protein disulfideisomerase domain containing protein	join(210602..210744,210810..210846,210979..211054,211136..211181,211248..211357,211470..211611,211708..211820,211939..211984,212133..212250)	Acanthamoeba castellanii str. Neff	14923754
ACA1_149840	CDS	ACA1_149840	NW_004457638.1	213299	214761	R	encoded by transcript ACA1_149840A; MTA70 family	complement(join(213299..213342,213378..213455,213763..213820,213927..214039,214180..214244,214380..214527,214677..214761))	Acanthamoeba castellanii str. Neff	14923755
ACA1_149850	CDS	ACA1_149850	NW_004457638.1	214866	217602	R	encoded by transcript ACA1_149850A; uncharacterized protein	complement(join(214866..214905,214921..215033,215206..215345,215466..215526,215550..215927,216006..216196,216358..216414,216695..217240,217342..217477,217519..217602))	Acanthamoeba castellanii str. Neff	14923756
ACA1_149870	CDS	ACA1_149870	NW_004457638.1	222202	226101	D	encoded by transcript ACA1_149870A; RhoGAP domain containing protein	join(222202..222309,222613..222897,223161..223254,223376..223461,223581..223603,223774..223960,224070..224528,224717..224851,224958..225097,225201..225582,225730..225923,226026..>226101)	Acanthamoeba castellanii str. Neff	14923758
ACA1_149880	CDS	ACA1_149880	NW_004457638.1	226303	227661	D	encoded by transcript ACA1_149880A; RasGEF domain containing protein	join(226303..226482,226631..226870,226967..227059,227164..227358,227497..227661)	Acanthamoeba castellanii str. Neff	14923759
ACA1_149890	CDS	ACA1_149890	NW_004457638.1	227927	228694	R	encoded by transcript ACA1_149890A; ribosomal protein S7p/S5e, putative	complement(join(227927..228070,228142..228550,228651..228694))	Acanthamoeba castellanii str. Neff	14923760
ACA1_149900	CDS	ACA1_149900	NW_004457638.1	229437	234959	D	encoded by transcript ACA1_149900A; uncharacterized protein	join(229437..229517,229595..229780,229857..230068,230140..230287,230361..230632,230719..231202,231288..231560,231619..231774,231860..232003,232120..232540,232661..232833,232920..233159,233269..233319,233406..233526,233608..233723,233821..233878,233979..234094,234222..234959)	Acanthamoeba castellanii str. Neff	14923761
ACA1_149910	CDS	ACA1_149910	NW_004457638.1	235125	237662	D	encoded by transcript ACA1_149910A; SWIM zinc finger domain containing protein	join(235125..235530,235693..235718,235738..236091,236188..236436,236557..236655,236749..236861,236984..237125,237246..237420,237439..237662)	Acanthamoeba castellanii str. Neff	14923762
ACA1_149930	CDS	ACA1_149930	NW_004457638.1	241111	247086	R	encoded by transcript ACA1_149930A; RasGEF domain containing protein	complement(join(241111..241317,241402..241665,241806..241933,242002..242207,242284..242452,242533..242677,242764..242904,242982..243098,243185..243302,243370..243445,243541..243873,243968..244060,244173..244329,244410..244499,244606..244844,244976..245084,245207..245299,245396..245927,246003..246168,246274..246387,246574..246627,246720..247086))	Acanthamoeba castellanii str. Neff	14923764
ACA1_149940	CDS	ACA1_149940	NW_004457638.1	247285	249109	D	encoded by transcript ACA1_149940A; glycine cleavage system T protein	join(247285..247547,247627..247744,247908..248097,248199..248350,248437..248620,248705..248821,248889..249109)	Acanthamoeba castellanii str. Neff	14923765
ACA1_149950	CDS	ACA1_149950	NW_004457638.1	249230	250736	R	encoded by transcript ACA1_149950A; Ser/Thr phosphatase family superfamily protein	complement(join(249230..249433,249537..249617,249732..249791,249900..250220,250326..250418,250534..250614,250701..250736))	Acanthamoeba castellanii str. Neff	14923766
ACA1_149960	CDS	ACA1_149960	NW_004457638.1	251342	257878	D	encoded by transcript ACA1_149960A; Ankyrin repeatcontaining protein	join(251342..251486,251575..251685,251989..252153,252236..252402,252555..252815,252849..252903,253274..253824,253961..254092,254252..254387,254504..254568,254712..254780,254910..255057,255152..255741,255842..256060,256185..257064,257190..257279,257398..257816,257840..257878)	Acanthamoeba castellanii str. Neff	14923767
ACA1_149970	CDS	ACA1_149970	NW_004457638.1	257939	260943	D	encoded by transcript ACA1_149970A; Poly(ADPribose) polymerase catalytic domain containing protein	join(257939..258506,258629..258716,258899..258984,259082..259266,259382..259715,259814..259943,260067..260170,260237..260295,260419..260499,260573..260634,260716..260806,260902..260943)	Acanthamoeba castellanii str. Neff	14923768
ACA1_149980	CDS	ACA1_149980	NW_004457638.1	261024	263950	R	encoded by transcript ACA1_149980A; uncharacterized protein	complement(join(261024..261236,261349..261522,261626..261687,261753..261916,262039..262281,262367..262440,262557..262630,262730..262884,262969..263055,263159..263227,263396..263483,263593..263950))	Acanthamoeba castellanii str. Neff	14923769
ACA1_149990	CDS	ACA1_149990	NW_004457638.1	264135	264578	R	encoded by transcript ACA1_149990A; ubiquitin domain containing protein	complement(264135..264578)	Acanthamoeba castellanii str. Neff	14923770
ACA1_150000	CDS	ACA1_150000	NW_004457638.1	264902	268422	R	encoded by transcript ACA1_150000A; uncharacterized protein	complement(join(264902..265044,265107..265170,265243..265357,265433..265479,265683..265756,265831..266012,266227..266273,266483..266533,266631..266714,266747..266833,266928..267046,267155..267315,267426..267536,267618..267757,267855..267944,268016..268053,268144..268243,268360..268422))	Acanthamoeba castellanii str. Neff	14923771
ACA1_150010	CDS	ACA1_150010	NW_004457638.1	268693	272469	R	encoded by transcript ACA1_150010A; Nup85 Nucleoporin, putative	complement(join(268693..268777,268859..268943,269070..269166,269265..269432,269495..269569,269651..269716,269867..269971,270046..270121,270228..270419,270550..270717,270805..271023,271109..271160,271259..271318,271455..271613,271719..271830,271921..272004,272111..272203,272320..272469))	Acanthamoeba castellanii str. Neff	14923772
ACA1_150020	CDS	ACA1_150020	NW_004457638.1	273089	273615	R	encoded by transcript ACA1_150020A; uncharacterized protein	complement(join(273089..273251,273344..273615))	Acanthamoeba castellanii str. Neff	14923773
ACA1_150030	CDS	ACA1_150030	NW_004457638.1	274017	274623	R	encoded by transcript ACA1_150030A; uncharacterized protein	complement(join(274017..274077,274164..274266,274365..274623))	Acanthamoeba castellanii str. Neff	14923774
ACA1_150040	CDS	ACA1_150040	NW_004457638.1	275081	276648	D	encoded by transcript ACA1_150040A; zinc finger, C3HC4 type (RING finger) domain containing protein	join(275081..275698,275834..276592,276607..276648)	Acanthamoeba castellanii str. Neff	14923775
ACA1_150050	CDS	ACA1_150050	NW_004457638.1	277187	279428	D	encoded by transcript ACA1_150050A; tRNA methyl transferase	join(277187..277296,277362..277407,277487..277576,277691..277856,278160..278277,278423..278586,278682..278754,278830..278965,279044..279188,279304..279428)	Acanthamoeba castellanii str. Neff	14923776
ACA1_150060	CDS	ACA1_150060	NW_004457638.1	279542	281734	R	encoded by transcript ACA1_150060A; twinarginine translocation pathway signal, putative	complement(join(279542..279697,279805..279932,280019..280181,280256..280314,280440..280601,280702..280783,280852..280940,281035..281150,281239..281314,281393..281491,281704..281734))	Acanthamoeba castellanii str. Neff	14923777
ACA1_150070	CDS	ACA1_150070	NW_004457638.1	282688	284192	R	encoded by transcript ACA1_150070A; uncharacterized protein	complement(join(282688..282954,283123..283607,283799..284192))	Acanthamoeba castellanii str. Neff	14923778
ACA1_150090	CDS	ACA1_150090	NW_004457638.1	285830	286839	D	encoded by transcript ACA1_150090A; ATPaselike protein	join(285830..285868,285925..286003,286114..286143,286209..286262,286371..286463,286568..286638,286723..286839)	Acanthamoeba castellanii str. Neff	14923780
ACA1_150100	CDS	ACA1_150100	NW_004457638.1	286952	287359	R	encoded by transcript ACA1_150100A; spermidine synthase	complement(286952..287359)	Acanthamoeba castellanii str. Neff	14923781
ACA1_339120	CDS	ACA1_339120	NW_004457636.1	93	1175	R	encoded by transcript ACA1_339120A; uncharacterized protein	complement(join(93..330,517..678,766..903,1042..1175))	Acanthamoeba castellanii str. Neff	14923675
ACA1_339230	CDS	ACA1_339230	NW_004457636.1	2877	3520	D	encoded by transcript ACA1_339230A; ankyrin repeat-containing protein	join(<2877..3293,3407..3520)	Acanthamoeba castellanii str. Neff	14923674
ACA1_339340	CDS	ACA1_339340	NW_004457636.1	4088	5351	D	encoded by transcript ACA1_339340A; selenide, water dikinase	join(<4088..4366,4469..4560,4989..5211,5235..5351)	Acanthamoeba castellanii str. Neff	14923668
ACA1_339350	CDS	ACA1_339350	NW_004457636.1	5462	6067	R	encoded by transcript ACA1_339350A; uncharacterized protein	complement(join(5462..5774,5869..6028,6043..6067))	Acanthamoeba castellanii str. Neff	14923669
ACA1_339360	CDS	ACA1_339360	NW_004457636.1	9687	10366	R	encoded by transcript ACA1_339360A; uncharacterized protein	complement(join(9687..9808,9886..10366))	Acanthamoeba castellanii str. Neff	14923670
ACA1_339370	CDS	ACA1_339370	NW_004457636.1	11687	11981	D	encoded by transcript ACA1_339370A; uncharacterized protein	join(11687..11879,11956..11981)	Acanthamoeba castellanii str. Neff	14923671
ACA1_339380	CDS	ACA1_339380	NW_004457636.1	12539	13740	D	encoded by transcript ACA1_339380A; uncharacterized protein	join(12539..13162,13302..13333,13374..13740)	Acanthamoeba castellanii str. Neff	14923672
ACA1_339390	CDS	ACA1_339390	NW_004457636.1	13833	16269	R	encoded by transcript ACA1_339390A; uncharacterized protein	complement(join(13833..14014,14166..14311,15918..15982,16099..16269))	Acanthamoeba castellanii str. Neff	14923673
ACA1_299930	CDS	ACA1_299930	NW_004457634.1	2491	2920	D	encoded by transcript ACA1_299930A; uncharacterized protein	join(2491..2542,2648..2717,2769..2781,2858..2920)	Acanthamoeba castellanii str. Neff	14923667
ACA1_300040	CDS	ACA1_300040	NW_004457634.1	6400	8756	D	encoded by transcript ACA1_300040A; uncharacterized protein	join(6400..6407,6456..6594,6943..7014,7041..7122,7228..7446,7503..7978,8748..8756)	Acanthamoeba castellanii str. Neff	14923665
ACA1_300250	CDS	ACA1_300250	NW_004457634.1	9957	11070	D	encoded by transcript ACA1_300250A; uncharacterized protein	join(9957..10020,10148..10224,10285..10533,10599..10801,10862..10959,11036..11070)	Acanthamoeba castellanii str. Neff	14923666
ACA1_109460	CDS	ACA1_109460	NW_004457633.1	266	772	D	encoded by transcript ACA1_109460A; uncharacterized protein	join(266..325,386..772)	Acanthamoeba castellanii str. Neff	14923664
ACA1_109470	CDS	ACA1_109470	NW_004457633.1	1238	2454	D	encoded by transcript ACA1_109470A; thioredoxin	join(1238..1402,1512..1586,1735..1960,2363..2454)	Acanthamoeba castellanii str. Neff	14923663
ACA1_109580	CDS	ACA1_109580	NW_004457633.1	5226	5792	R	encoded by transcript ACA1_109580A; uncharacterized protein	complement(join(5226..5305,5533..5629,5721..5792))	Acanthamoeba castellanii str. Neff	14923662
ACA1_109590	CDS	ACA1_109590	NW_004457633.1	7325	7907	D	encoded by transcript ACA1_109590A; uncharacterized protein	join(7325..7358,7489..7634,7797..7907)	Acanthamoeba castellanii str. Neff	14923661
ACA1_080050	CDS	ACA1_080050	NW_004457632.1	188	5591	D	encoded by transcript ACA1_080050A; DNAdirected RNA polymerase, omega subunit	join(188..326,493..581,655..4826,4943..5591)	Acanthamoeba castellanii str. Neff	14923660
ACA1_080060	CDS	ACA1_080060	NW_004457632.1	5799	7834	D	encoded by transcript ACA1_080060A; L-asparaginase I, putative	join(5799..6011,6137..6230,6330..6415,6532..6748,6870..6965,7033..7106,7230..7290,7381..7476,7544..7618,7710..7834)	Acanthamoeba castellanii str. Neff	14923603
ACA1_080070	CDS	ACA1_080070	NW_004457632.1	8095	12418	D	encoded by transcript ACA1_080070A; EGF family domain containing protein	join(8095..8167,8286..8455,8524..8641,8705..8892,8986..9094,9192..9390,9681..9726,9748..9795,10005..10087,10188..10285,10352..10477,10561..10690,10788..10897,10996..11223,11300..11419,11522..11626,11679..11760,11783..11937,12025..12198,12286..>12418)	Acanthamoeba castellanii str. Neff	14923629
ACA1_080180	CDS	ACA1_080180	NW_004457632.1	13318	14653	R	encoded by transcript ACA1_080180A; uncharacterized protein	complement(join(<13318..13773,13847..13933,14070..14156,14235..14312,14579..14653))	Acanthamoeba castellanii str. Neff	14923630
ACA1_080290	CDS	ACA1_080290	NW_004457632.1	15168	16829	R	encoded by transcript ACA1_080290A; uncharacterized protein	complement(join(15168..15408,15511..15856,15917..15959,16369..16509,16600..16648,16750..16829))	Acanthamoeba castellanii str. Neff	14923631
ACA1_080400	CDS	ACA1_080400	NW_004457632.1	17182	18574	R	encoded by transcript ACA1_080400A; methyltransferase, FkbM subfamily protein	complement(join(17182..17379,17455..17586,17670..17873,18035..18574))	Acanthamoeba castellanii str. Neff	14923632
ACA1_080410	CDS	ACA1_080410	NW_004457632.1	18869	20488	R	encoded by transcript ACA1_080410A; radial spoke head 10 B family protein, putative	complement(join(18869..18985,19082..19225,19625..19762,19837..19946,20030..20131,20215..20488))	Acanthamoeba castellanii str. Neff	14923633
ACA1_080520	CDS	ACA1_080520	NW_004457632.1	20728	21934	R	encoded by transcript ACA1_080520A; nucleotidyl transferase superfamily protein	complement(join(20728..20861,20984..21134,21175..21420,21520..21744,21845..21934))	Acanthamoeba castellanii str. Neff	14923634
ACA1_080530	CDS	ACA1_080530	NW_004457632.1	22753	26094	D	encoded by transcript ACA1_080530A; uncharacterized protein	join(22753..22780,22860..23009,23104..23199,23320..23391,23457..23573,23657..23779,23862..23952,24034..24110,24151..24230,24288..24543,24656..24734,24818..24858,24929..25057,25182..25290,25404..25533,25622..25710,25798..26021,26084..26094)	Acanthamoeba castellanii str. Neff	14923635
ACA1_080540	CDS	ACA1_080540	NW_004457632.1	26619	29762	D	encoded by transcript ACA1_080540A; SH2 domain containing protein	join(26619..26828,26973..27012,27105..27128,27226..27292,27495..27510,27527..27652,27836..28000,28122..28331,28429..28565,28641..28783,28879..28951,29054..29762)	Acanthamoeba castellanii str. Neff	14923636
ACA1_080550	CDS	ACA1_080550	NW_004457632.1	30186	32957	D	encoded by transcript ACA1_080550A; FAD binding domain containing protein	join(30186..30305,30393..30539,30658..30788,30880..31098,31181..31312,31392..31513,31573..31865,31956..32121,32210..32296,32380..32435,32525..32715,32819..32957)	Acanthamoeba castellanii str. Neff	14923637
ACA1_080570	CDS	ACA1_080570	NW_004457632.1	35420	37575	R	encoded by transcript ACA1_080570A; nuclear transport factor 2 (ntf2) domain containing protein	complement(join(35420..35788,35915..36654,36760..36927,37080..37332,37399..37575))	Acanthamoeba castellanii str. Neff	14923604
ACA1_080580	CDS	ACA1_080580	NW_004457632.1	38328	39558	D	encoded by transcript ACA1_080580A; Syntaxin7A, putative	join(38328..38681,38764..38909,39046..39260,39371..39558)	Acanthamoeba castellanii str. Neff	14923605
ACA1_080590	CDS	ACA1_080590	NW_004457632.1	40442	45046	D	encoded by transcript ACA1_080590A; leucine rich repeat domain containing protein	join(40442..40835,41128..41297,41412..41684,41810..41871,41969..42249,42407..42529,42627..42731,42847..42991,43096..43315,43472..43670,43796..43964,44038..44112,44200..44266,44346..44650,44731..44867,44961..45046)	Acanthamoeba castellanii str. Neff	14923606
ACA1_080610	CDS	ACA1_080610	NW_004457632.1	47653	49455	R	encoded by transcript ACA1_080610A; protein kinase domain containing protein	complement(join(47653..47809,47886..48133,48341..48575,48711..48790,48886..49455))	Acanthamoeba castellanii str. Neff	14923608
ACA1_080620	CDS	ACA1_080620	NW_004457632.1	49356	49729	D	encoded by transcript ACA1_080620A; uncharacterized protein	join(49356..49526,49616..49729)	Acanthamoeba castellanii str. Neff	14923610
ACA1_080630	CDS	ACA1_080630	NW_004457632.1	50055	51546	D	encoded by transcript ACA1_080630A; alcohol dehydrogenase GroESlike domain containing protein	join(50055..50159,50224..50359,50421..50492,50573..51546)	Acanthamoeba castellanii str. Neff	14923609
ACA1_080640	CDS	ACA1_080640	NW_004457632.1	52114	53028	R	encoded by transcript ACA1_080640A; 29 kDa IgEbinging protein	complement(join(52114..52173,52312..53028))	Acanthamoeba castellanii str. Neff	14923611
ACA1_080650	CDS	ACA1_080650	NW_004457632.1	53515	56561	D	encoded by transcript ACA1_080650A; Fbox domain containing protein	join(53515..53551,53575..53805,53886..53985,54110..54518,54613..54742,54850..54935,55098..55265,55349..55432,55518..55596,55708..55761,55836..55957,56034..56126,56190..56322,56347..56561)	Acanthamoeba castellanii str. Neff	14923612
ACA1_080660	CDS	ACA1_080660	NW_004457632.1	56712	58040	D	encoded by transcript ACA1_080660A; nucleosome assembly protein family	join(56712..56921,57061..57852,57939..58040)	Acanthamoeba castellanii str. Neff	14923613
ACA1_080670	CDS	ACA1_080670	NW_004457632.1	59287	60899	D	encoded by transcript ACA1_080670A; serine/threonine kinase	join(59287..59938,60011..60100,60181..60269,60344..60451,60524..60682,60762..60899)	Acanthamoeba castellanii str. Neff	14923614
ACA1_080680	CDS	ACA1_080680	NW_004457632.1	61614	63559	D	encoded by transcript ACA1_080680A; tubulin beta1 chain, putative	join(61614..61860,62075..62207,62290..62841,62939..63071,63179..63559)	Acanthamoeba castellanii str. Neff	14923615
ACA1_080690	CDS	ACA1_080690	NW_004457632.1	64413	64700	R	encoded by transcript ACA1_080690A; uncharacterized protein	complement(64413..64700)	Acanthamoeba castellanii str. Neff	14923616
ACA1_080710	CDS	ACA1_080710	NW_004457632.1	66191	66465	R	encoded by transcript ACA1_080710A; uncharacterized protein	complement(join(66191..66286,66337..66465))	Acanthamoeba castellanii str. Neff	14923618
ACA1_080720	CDS	ACA1_080720	NW_004457632.1	66920	67318	R	encoded by transcript ACA1_080720A; uncharacterized protein	complement(66920..67318)	Acanthamoeba castellanii str. Neff	14923619
ACA1_080730	CDS	ACA1_080730	NW_004457632.1	67691	70093	R	encoded by transcript ACA1_080730A; BAG domain containing protein	complement(join(67691..68674,68774..69472,69557..70093))	Acanthamoeba castellanii str. Neff	14923620
ACA1_080750	CDS	ACA1_080750	NW_004457632.1	76203	76998	R	encoded by transcript ACA1_080750A; Ankyrin repeat containing protein	complement(join(76203..76273,76361..76508,76642..76751,76869..76998))	Acanthamoeba castellanii str. Neff	14923622
ACA1_080760	CDS	ACA1_080760	NW_004457632.1	77215	78685	R	encoded by transcript ACA1_080760A; uncharacterized protein	complement(join(77215..77357,77469..77546,77619..77718,77822..77923,78018..78093,78174..78358,78459..78516,78597..78685))	Acanthamoeba castellanii str. Neff	14923623
ACA1_080870	CDS	ACA1_080870	NW_004457632.1	79425	80815	R	encoded by transcript ACA1_080870A; leucine rich repeat domain containing protein	complement(join(79425..79579,79643..79775,79899..80019,80092..80161,80238..80348,80425..80555,80643..80815))	Acanthamoeba castellanii str. Neff	14923624
ACA1_080980	CDS	ACA1_080980	NW_004457632.1	82768	85766	R	encoded by transcript ACA1_080980A; leucine rich repeat domain containing protein	complement(join(82768..82969,83060..83568,83660..83857,83927..84012,84076..84208,84351..84471,84540..84609,84662..84799,84876..85012,85094..85311,85410..85766))	Acanthamoeba castellanii str. Neff	14923625
ACA1_081090	CDS	ACA1_081090	NW_004457632.1	86534	86947	D	encoded by transcript ACA1_081090A; uncharacterized protein	join(86534..86553,86683..86947)	Acanthamoeba castellanii str. Neff	14923626
ACA1_081100	CDS	ACA1_081100	NW_004457632.1	89120	92325	R	encoded by transcript ACA1_081100A; prephenate dehydratase	complement(join(89120..89285,89369..89465,89554..89623,89707..89798,89897..90239,90346..90457,90539..90630,90751..90986,91101..91206,91266..91706,91840..92325))	Acanthamoeba castellanii str. Neff	14923627
ACA1_081420	CDS	ACA1_081420	NW_004457632.1	106934	108297	D	encoded by transcript ACA1_081420A; uncharacterized protein	join(106934..106982,107059..107321,107462..107787,107872..108002,108104..108297)	Acanthamoeba castellanii str. Neff	14923639
ACA1_081440	CDS	ACA1_081440	NW_004457632.1	109565	110631	R	encoded by transcript ACA1_081440A; Alg14 family oligosaccharide biosynthesis protein	complement(join(109565..109732,109844..109903,110007..110143,110230..110361,110457..110631))	Acanthamoeba castellanii str. Neff	14923641
ACA1_081450	CDS	ACA1_081450	NW_004457632.1	110871	111937	D	encoded by transcript ACA1_081450A; carbon-monoxide oxygenase, putative	join(110871..111060,111145..111298,111411..111507,111577..111670,111762..111937)	Acanthamoeba castellanii str. Neff	14923642
ACA1_081460	CDS	ACA1_081460	NW_004457632.1	112065	114514	R	encoded by transcript ACA1_081460A; FHA domain containing protein	complement(join(112065..112417,112503..112698,112785..112924,113012..113155,113269..114279,114349..114514))	Acanthamoeba castellanii str. Neff	14923643
ACA1_081470	CDS	ACA1_081470	NW_004457632.1	114990	115762	D	encoded by transcript ACA1_081470A; uncharacterized protein	join(114990..115417,115521..115652,115684..115762)	Acanthamoeba castellanii str. Neff	14923644
ACA1_081580	CDS	ACA1_081580	NW_004457632.1	116166	117104	R	encoded by transcript ACA1_081580A; Nacetylglucosaminyl-phosphatidylinositol biosynthetic protein gpi1, putative	complement(join(116166..116294,116450..116520,116610..116864,116963..117104))	Acanthamoeba castellanii str. Neff	14923645
ACA1_081690	CDS	ACA1_081690	NW_004457632.1	121048	121749	R	encoded by transcript ACA1_081690A; uncharacterized protein	complement(join(121048..121499,121564..121624,121708..121749))	Acanthamoeba castellanii str. Neff	14923646
ACA1_081800	CDS	ACA1_081800	NW_004457632.1	136701	137314	D	encoded by transcript ACA1_081800A; Acetylcholinesterase	join(136701..137036,137138..137314)	Acanthamoeba castellanii str. Neff	14923647
ACA1_081810	CDS	ACA1_081810	NW_004457632.1	137449	137909	R	encoded by transcript ACA1_081810A; uncharacterized protein	complement(join(137449..137719,137821..137909))	Acanthamoeba castellanii str. Neff	14923648
ACA1_081820	CDS	ACA1_081820	NW_004457632.1	138305	139555	R	encoded by transcript ACA1_081820A; cytidyltransferaserelated domain containing protein	complement(join(138305..138546,138627..138801,138864..138986,139178..139555))	Acanthamoeba castellanii str. Neff	14923649
ACA1_081830	CDS	ACA1_081830	NW_004457632.1	139734	141092	D	encoded by transcript ACA1_081830A; mitochondrial genome maintenance protein	join(139734..139769,140151..140428,140528..141092)	Acanthamoeba castellanii str. Neff	14923650
ACA1_081840	CDS	ACA1_081840	NW_004457632.1	141182	144117	R	encoded by transcript ACA1_081840A; Nacetylglucosaminyl transferase component Gpi1, putative	complement(join(141182..141310,141466..141536,141618..141872,141962..142156,142299..142581,142652..142932,142973..143064,143166..143245,143332..143461,143562..143605,143721..143777,143849..143962,144030..144076,144102..144117))	Acanthamoeba castellanii str. Neff	14923651
ACA1_081850	CDS	ACA1_081850	NW_004457632.1	144314	150799	R	encoded by transcript ACA1_081850A; HEAT repeat domain containing protein	complement(join(144314..144829,144935..145395,145472..145702,145855..146161,146240..146411,146530..146656,146761..146926,147035..147180,147256..147399,147500..147701,147786..147893,147987..148238,148345..148499,148596..148611,148632..148748,148820..149299,149411..149552,149627..149967,150046..150232,150318..150444,150589..150799))	Acanthamoeba castellanii str. Neff	14923652
ACA1_081860	CDS	ACA1_081860	NW_004457632.1	151129	151543	R	encoded by transcript ACA1_081860A; serine/threonine protein kinase, putative	complement(join(151129..151251,151337..151543))	Acanthamoeba castellanii str. Neff	14923653
ACA1_081870	CDS	ACA1_081870	NW_004457632.1	151784	152628	D	encoded by transcript ACA1_081870A; HIV1 Tat interactive protein 2, 30kDa, putative	join(151784..151831,151916..151975,152070..152198,152306..152409,152490..152628)	Acanthamoeba castellanii str. Neff	14923654
ACA1_081880	CDS	ACA1_081880	NW_004457632.1	154382	155566	D	encoded by transcript ACA1_081880A; WWE domain containing protein	join(154382..154560,154626..154664,154743..154792,154866..154973,155111..155472,155561..155566)	Acanthamoeba castellanii str. Neff	14923655
ACA1_081990	CDS	ACA1_081990	NW_004457632.1	155742	156059	R	encoded by transcript ACA1_081990A; uncharacterized protein	complement(join(155742..155801,155907..156059))	Acanthamoeba castellanii str. Neff	14923656
ACA1_082000	CDS	ACA1_082000	NW_004457632.1	156292	156763	D	encoded by transcript ACA1_082000A; HIV1 Tat interactive protein, putative	join(156292..156342,156449..156533,156614..156687,156749..156763)	Acanthamoeba castellanii str. Neff	14923657
ACA1_082010	CDS	ACA1_082010	NW_004457632.1	156865	158945	D	encoded by transcript ACA1_082010A; serine/threonine protein kinase	join(156865..157282,157382..157849,158035..158216,158297..158488,158577..158688,158911..158945)	Acanthamoeba castellanii str. Neff	14923658
ACA1_082020	CDS	ACA1_082020	NW_004457632.1	160077	160360	D	encoded by transcript ACA1_082020A; poly(ADPribose) polymerase, catalytic region domain containing protein	join(160077..160258,160324..>160360)	Acanthamoeba castellanii str. Neff	14923659
ACA1_331580	CDS	ACA1_331580	NW_004457631.1	1572	2219	R	encoded by transcript ACA1_331580A; Erv1 / Alr family protein	complement(1572..2219)	Acanthamoeba castellanii str. Neff	14923602
ACA1_331590	CDS	ACA1_331590	NW_004457631.1	2393	8571	D	encoded by transcript ACA1_331590A; ATPdependent DNA helicase, RecQ subfamily protein	join(2393..2578,2643..2708,2829..2911,2987..3536,3609..3682,4005..4130,4491..4576,4659..4785,4877..5229,5361..5504,5640..5707,5844..6032,6186..6254,6362..6452,6528..6662,6843..7020,7163..7277,7721..7864,7966..8031,8144..8270,8345..8571)	Acanthamoeba castellanii str. Neff	14923583
ACA1_331700	CDS	ACA1_331700	NW_004457631.1	9522	13468	R	encoded by transcript ACA1_331700A; variant sh3 domain containing protein	complement(join(9522..9757,9842..11141,11214..11588,11728..11882,12000..12069,12137..13468))	Acanthamoeba castellanii str. Neff	14923594
ACA1_331710	CDS	ACA1_331710	NW_004457631.1	13822	14817	D	encoded by transcript ACA1_331710A; Autophagy-related protein 27 protein	join(13822..14237,14346..14540,14622..14817)	Acanthamoeba castellanii str. Neff	14923584
ACA1_331720	CDS	ACA1_331720	NW_004457631.1	15187	16167	R	encoded by transcript ACA1_331720A; GNS1/SUR4 family protein	complement(15187..16167)	Acanthamoeba castellanii str. Neff	14923585
ACA1_331730	CDS	ACA1_331730	NW_004457631.1	16867	18791	D	encoded by transcript ACA1_331730A; uncharacterized protein	join(16867..17010,17275..17347,17424..17602,17694..17836,17923..18029,18131..18323,18433..18581,18697..18791)	Acanthamoeba castellanii str. Neff	14923586
ACA1_331740	CDS	ACA1_331740	NW_004457631.1	19241	19820	D	encoded by transcript ACA1_331740A; uncharacterized protein	join(19241..19362,19412..19820)	Acanthamoeba castellanii str. Neff	14923587
ACA1_331750	CDS	ACA1_331750	NW_004457631.1	20349	21809	R	encoded by transcript ACA1_331750A; uncharacterized protein	complement(join(20349..20487,20564..20706,20795..20869,21106..21185,21261..21517,21607..21809))	Acanthamoeba castellanii str. Neff	14923588
ACA1_331760	CDS	ACA1_331760	NW_004457631.1	22129	22717	R	encoded by transcript ACA1_331760A; uncharacterized protein	complement(join(22129..22182,22267..22501,22629..>22717))	Acanthamoeba castellanii str. Neff	14923589
ACA1_331770	CDS	ACA1_331770	NW_004457631.1	22814	24191	R	encoded by transcript ACA1_331770A; uncharacterized protein	complement(join(22814..22852,22941..23172,23236..23995,24116..24191))	Acanthamoeba castellanii str. Neff	14923590
ACA1_331780	CDS	ACA1_331780	NW_004457631.1	24926	29319	R	encoded by transcript ACA1_331780A; BRCA1 C Terminus (BRCT) domain containing protein	complement(join(24926..24973,25092..25199,25319..25399,25518..25584,25722..25874,25981..26134,26245..26338,26459..26527,26615..26691,26785..28029,28149..28371,28468..28572,28651..28699,28786..29098,29187..29319))	Acanthamoeba castellanii str. Neff	14923591
ACA1_331790	CDS	ACA1_331790	NW_004457631.1	29481	31513	D	encoded by transcript ACA1_331790A; Alpha(1,3)-fucosyltransferase 10, putative	join(29481..29705,29823..29936,30080..30221,30308..30432,30542..30667,30785..30938,31037..31109,31191..31334,31429..31513)	Acanthamoeba castellanii str. Neff	14923592
ACA1_331800	CDS	ACA1_331800	NW_004457631.1	31743	34603	R	encoded by transcript ACA1_331800A; uncharacterized protein	complement(join(31743..32215,32364..32452,32562..32703,32795..32930,33089..33219,33351..33444,33575..33688,33815..33940,34062..34207,34303..34603))	Acanthamoeba castellanii str. Neff	14923593
ACA1_331910	CDS	ACA1_331910	NW_004457631.1	35135	36606	R	encoded by transcript ACA1_331910A; HCNGP family protein	complement(join(35135..35180,35286..35547,35681..35797,35914..36037,36157..36224,36315..36606))	Acanthamoeba castellanii str. Neff	14923595
ACA1_331920	CDS	ACA1_331920	NW_004457631.1	36837	37774	D	encoded by transcript ACA1_331920A; uncharacterized protein	join(36837..37055,37145..37181,37252..37352,37416..37530,37614..37774)	Acanthamoeba castellanii str. Neff	14923596
ACA1_331930	CDS	ACA1_331930	NW_004457631.1	37878	42094	R	encoded by transcript ACA1_331930A; leucine rich repeat domain containing protein	complement(join(37878..38200,38322..38409,38479..38562,38670..38969,39009..39190,39315..39415,39526..39656,39725..40738,40854..41003,41169..41296,41382..41423,41548..41691,41761..42094))	Acanthamoeba castellanii str. Neff	14923597
ACA1_331950	CDS	ACA1_331950	NW_004457631.1	49313	51203	R	encoded by transcript ACA1_331950A; RNA recognition motif domain containing protein	complement(join(49313..49668,49763..49867,50019..50094,50255..50340,50491..50597,50721..50840,50967..51018,51116..51203))	Acanthamoeba castellanii str. Neff	14923599
ACA1_331960	CDS	ACA1_331960	NW_004457631.1	51313	53904	R	encoded by transcript ACA1_331960A; zinc finger, c2h2 type domain containing protein	complement(join(51313..51400,51478..51538,51602..51707,51840..51964,52038..52210,52298..52416,52504..52652,52747..52934,53014..53430,53585..53781,53818..53904))	Acanthamoeba castellanii str. Neff	14923600
ACA1_331970	CDS	ACA1_331970	NW_004457631.1	54813	57490	D	encoded by transcript ACA1_331970A; RhoGEF domain containing protein	join(54813..54899,54910..55003,55088..55148,55269..55352,55427..55611,55773..55930,56017..56124,56218..56325,56414..56505,56602..56695,56779..56877,56967..57285,57348..>57490)	Acanthamoeba castellanii str. Neff	14923601
ACA1_090530	CDS	ACA1_090530	NW_004457630.1	3726	4348	R	encoded by transcript ACA1_090530A; uncharacterized protein	complement(join(3726..4049,4178..4348))	Acanthamoeba castellanii str. Neff	14923582
ACA1_010150	CDS	ACA1_010150	NW_004457629.1	251	1529	R	encoded by transcript ACA1_010150A; SnoaL family polyketide cyclase	complement(join(251..399,502..553,637..731,871..951,1035..1156,1273..1529))	Acanthamoeba castellanii str. Neff	14923578
ACA1_010160	CDS	ACA1_010160	NW_004457629.1	1660	4556	R	encoded by transcript ACA1_010160A; uncharacterized protein	complement(join(1660..1822,1942..2080,2177..2455,2545..2620,2714..2871,2972..3212,3369..3620,3701..3792,3869..3967,4056..4114,4204..4556))	Acanthamoeba castellanii str. Neff	14923579
ACA1_010170	CDS	ACA1_010170	NW_004457629.1	4974	6229	R	encoded by transcript ACA1_010170A; uncharacterized protein	complement(join(4974..5307,5389..5543,5651..5797,5961..6130,6193..6229))	Acanthamoeba castellanii str. Neff	14923575
ACA1_010180	CDS	ACA1_010180	NW_004457629.1	6696	7899	D	encoded by transcript ACA1_010180A; DUF410 family protein	join(6696..6852,6924..7002,7084..7166,7255..7463,7530..7664,7747..7899)	Acanthamoeba castellanii str. Neff	14923576
ACA1_010190	CDS	ACA1_010190	NW_004457629.1	8105	13017	D	encoded by transcript ACA1_010190A; uncharacterized protein	join(8105..8257,8406..8728,8826..9952,10023..10136,10212..10550,10623..10751,10832..10845,10945..11035,11120..11174,11268..11406,11493..11556,11673..11689,11761..11822,11915..11988,12138..12217,12289..12402,12506..12583,12666..12761,12886..>13017)	Acanthamoeba castellanii str. Neff	14923577
ACA1_323830	CDS	ACA1_323830	NW_004457628.1	7838	9015	D	encoded by transcript ACA1_323830A; uncharacterized protein	join(7838..8151,8473..8613,8694..8839,8924..9015)	Acanthamoeba castellanii str. Neff	14923574
ACA1_324040	CDS	ACA1_324040	NW_004457628.1	12017	13386	R	encoded by transcript ACA1_324040A; carrier superfamily protein	complement(join(12017..12238,12323..12485,12566..12704,12774..12975,13049..13097,13163..13386))	Acanthamoeba castellanii str. Neff	14923571
ACA1_324050	CDS	ACA1_324050	NW_004457628.1	13688	18665	D	encoded by transcript ACA1_324050A; uncharacterized protein	join(13688..13850,13917..14029,14145..14244,14313..14497,14576..14678,14743..15136,15228..15656,15712..15782,15845..15926,15990..16149,16219..16284,16342..16509,16603..16770,16829..16895,16977..17163,17235..17571,17667..18202,18291..18399,18600..18665)	Acanthamoeba castellanii str. Neff	14923569
ACA1_324060	CDS	ACA1_324060	NW_004457628.1	18967	19982	D	encoded by transcript ACA1_324060A; uncharacterized protein	join(18967..19439,19502..19982)	Acanthamoeba castellanii str. Neff	14923572
ACA1_324170	CDS	ACA1_324170	NW_004457628.1	20334	21095	D	encoded by transcript ACA1_324170A; uncharacterized protein	join(20334..20370,20438..20574,20648..20794,20882..21049,21087..21095)	Acanthamoeba castellanii str. Neff	14923573
ACA1_034290	CDS	ACA1_034290	NW_004457626.1	3516	5213	D	encoded by transcript ACA1_034290A; calcium/ calmodulindependent protein kinase, putative	join(3516..3561,3693..3841,3948..4183,4392..4480,4673..4787,4898..5213)	Acanthamoeba castellanii str. Neff	14923542
ACA1_034300	CDS	ACA1_034300	NW_004457626.1	5439	7052	D	encoded by transcript ACA1_034300A; transmembrane 7 superfamily member, putative	join(5439..5542,5604..5750,5815..5969,6046..6293,6411..6500,6561..6639,6750..6907,7005..7052)	Acanthamoeba castellanii str. Neff	14923543
ACA1_034330	CDS	ACA1_034330	NW_004457626.1	17005	19991	D	encoded by transcript ACA1_034330A; translation elongation factor1 alpha, putative	join(17005..17031,17149..17382,17458..17515,17586..17726,17857..17957,18055..18148,18233..18342,18427..18481,18600..18880,18967..19025,19347..19414,19427..19550,19653..19782,19860..19991)	Acanthamoeba castellanii str. Neff	14923556
ACA1_034340	CDS	ACA1_034340	NW_004457626.1	20570	20870	D	encoded by transcript ACA1_034340A; uncharacterized protein	join(20570..20673,20774..20870)	Acanthamoeba castellanii str. Neff	14923557
ACA1_034460	CDS	ACA1_034460	NW_004457626.1	42608	43341	D	encoded by transcript ACA1_034460A; Ankyrin repeat containing protein	join(42608..42840,42946..43140,43221..43341)	Acanthamoeba castellanii str. Neff	14923559
ACA1_034470	CDS	ACA1_034470	NW_004457626.1	43450	44310	R	encoded by transcript ACA1_034470A; uncharacterized protein	complement(43450..44310)	Acanthamoeba castellanii str. Neff	14923560
ACA1_034480	CDS	ACA1_034480	NW_004457626.1	48224	55929	D	encoded by transcript ACA1_034480A; Multisensor hybrid histidine kinase, putative	join(48224..48585,48686..48785,48848..48908,49021..49270,49347..49439,49543..49680,49855..50136,50229..50313,50403..50704,50755..50939,51033..51164,51267..51338,51434..51900,51997..52117,52202..52521,52605..52737,52870..53002,53019..53060,53113..53294,53392..53520,53642..53832,53924..54104,54183..54291,54399..54551,54680..55054,55127..55373,55456..55689,55778..55899,55923..55929)	Acanthamoeba castellanii str. Neff	14923561
ACA1_034490	CDS	ACA1_034490	NW_004457626.1	56337	57108	R	encoded by transcript ACA1_034490A; uncharacterized protein	complement(join(56337..56451,56610..56739,56820..57108))	Acanthamoeba castellanii str. Neff	14923562
ACA1_034500	CDS	ACA1_034500	NW_004457626.1	57305	58122	R	encoded by transcript ACA1_034500A; uncharacterized protein	complement(join(57305..57432,57539..57674,57707..57783,57864..58122))	Acanthamoeba castellanii str. Neff	14923563
ACA1_034510	CDS	ACA1_034510	NW_004457626.1	59170	59965	D	encoded by transcript ACA1_034510A; Rho family, small GTP binding protein Rac3, putative	join(59170..59266,59347..59467,59540..59811,59874..59965)	Acanthamoeba castellanii str. Neff	14923564
ACA1_034520	CDS	ACA1_034520	NW_004457626.1	60683	63595	D	encoded by transcript ACA1_034520A; Gprotein-coupled receptor, putative	join(60683..60844,61007..61110,61262..61413,61545..61706,61828..61974,62055..62156,62253..62420,62503..62592,62687..62748,62823..62929,63003..63076,63164..63273,63369..63422,63500..63595)	Acanthamoeba castellanii str. Neff	14923565
ACA1_034530	CDS	ACA1_034530	NW_004457626.1	63903	65166	D	encoded by transcript ACA1_034530A; uncharacterized protein	join(63903..63942,64055..64229,64314..64371,64470..64604,64664..64713,64800..64912,64985..65166)	Acanthamoeba castellanii str. Neff	14923566
ACA1_034540	CDS	ACA1_034540	NW_004457626.1	65576	66411	D	encoded by transcript ACA1_034540A; ribosomal protein S13p/S18e, putative	join(65576..65599,65879..66039,66108..66411)	Acanthamoeba castellanii str. Neff	14923567
ACA1_034550	CDS	ACA1_034550	NW_004457626.1	67351	67887	R	encoded by transcript ACA1_034550A; ribosomal protein S10p/S20e, putative	complement(join(67351..67496,67579..67692,67785..67887))	Acanthamoeba castellanii str. Neff	14923544
ACA1_034560	CDS	ACA1_034560	NW_004457626.1	68572	74202	D	encoded by transcript ACA1_034560A; protein kinase, putative	join(68572..69260,69345..69390,69464..69543,69642..69679,69761..69847,69926..70010,70162..70217,70291..70450,70564..70703,70777..71493,71595..71758,71863..71962,72077..72138,72236..72314,72404..72426,72515..72783,72887..73406,73516..74202)	Acanthamoeba castellanii str. Neff	14923545
ACA1_034570	CDS	ACA1_034570	NW_004457626.1	74645	76363	D	encoded by transcript ACA1_034570A; transcription factor e2f domain containing protein	join(74645..75082,75148..75327,75395..75501,75574..76363)	Acanthamoeba castellanii str. Neff	14923546
ACA1_034580	CDS	ACA1_034580	NW_004457626.1	76729	77604	R	encoded by transcript ACA1_034580A; uncharacterized protein	complement(76729..77604)	Acanthamoeba castellanii str. Neff	14923547
ACA1_034590	CDS	ACA1_034590	NW_004457626.1	78053	84202	R	encoded by transcript ACA1_034590A; helicase conserved Cterminal domain containing protein	complement(join(78053..78164,78259..78383,78495..78584,78661..78742,78872..79098,79161..79376,79481..79680,79790..79911,79990..80087,80189..80286,80374..80494,80593..80664,80776..80871,80960..81369,81469..81712,81737..81934,82015..82092,82172..82284,82365..82436,82534..82795,82894..83433,83542..83602,83704..83825,83993..84202))	Acanthamoeba castellanii str. Neff	14923548
ACA1_034600	CDS	ACA1_034600	NW_004457626.1	84334	85591	D	encoded by transcript ACA1_034600A; uncharacterized protein	join(84334..84631,84774..84888,84989..85015,85177..85246,85319..85402,85478..85591)	Acanthamoeba castellanii str. Neff	14923549
ACA1_034610	CDS	ACA1_034610	NW_004457626.1	85727	86560	R	encoded by transcript ACA1_034610A; uncharacterized protein	complement(join(85727..85927,85958..86296,86405..86560))	Acanthamoeba castellanii str. Neff	14923550
ACA1_034720	CDS	ACA1_034720	NW_004457626.1	88621	91984	R	encoded by transcript ACA1_034720A; C2 domain containing protein	complement(join(88621..88808,88888..88957,89038..89133,89217..89285,89371..89457,89544..89687,89797..89862,89942..90028,90109..90264,90585..90929,91015..91278,91454..91603,91662..91755,91854..91984))	Acanthamoeba castellanii str. Neff	14923551
ACA1_034930	CDS	ACA1_034930	NW_004457626.1	94397	94624	D	encoded by transcript ACA1_034930A; uncharacterized protein	94397..94624	Acanthamoeba castellanii str. Neff	14923552
ACA1_035040	CDS	ACA1_035040	NW_004457626.1	96393	96851	D	encoded by transcript ACA1_035040A; uncharacterized protein	<96393..96851	Acanthamoeba castellanii str. Neff	14923553
ACA1_307780	CDS	ACA1_307780	NW_004457625.1	2664	4031	D	encoded by transcript ACA1_307780A; uncharacterized protein	join(2664..2870,2928..2960,3060..3147,3321..3423,3524..4031)	Acanthamoeba castellanii str. Neff	14923541
ACA1_307790	CDS	ACA1_307790	NW_004457625.1	5680	9695	R	encoded by transcript ACA1_307790A; protein kinase domain containing protein	complement(join(5680..6981,7120..7175,7303..7535,7666..7788,7919..8007,8417..8571,8634..8798,8979..9131,9200..9358,9491..9695))	Acanthamoeba castellanii str. Neff	14923540
ACA1_307800	CDS	ACA1_307800	NW_004457625.1	11513	16976	D	encoded by transcript ACA1_307800A; phospholipase, patatin family protein	join(11513..11596,11796..11819,12001..12083,12196..12516,12609..12732,12804..12908,13019..13208,13301..13459,13600..13682,13795..13851,13951..14067,14174..14463,14549..14609,14715..14808,14905..15063,15152..15196,15266..15348,15436..15559,15635..15703,15791..15888,16189..16314,16405..16459,16541..16635,16719..16976)	Acanthamoeba castellanii str. Neff	14923532
ACA1_307810	CDS	ACA1_307810	NW_004457625.1	17068	18924	R	encoded by transcript ACA1_307810A; K+ channel tetramerization subfamily protein	complement(join(17068..17408,17486..17679,17756..18477,18664..18924))	Acanthamoeba castellanii str. Neff	14923533
ACA1_307820	CDS	ACA1_307820	NW_004457625.1	19143	20832	R	encoded by transcript ACA1_307820A; BSD domain containing protein	complement(join(19143..19214,19286..19464,19547..19825,19918..20013,20121..20308,20396..20646,20743..20832))	Acanthamoeba castellanii str. Neff	14923526
ACA1_307830	CDS	ACA1_307830	NW_004457625.1	20983	21917	R	encoded by transcript ACA1_307830A; uncharacterized protein	complement(join(20983..21075,21162..21292,21362..21917))	Acanthamoeba castellanii str. Neff	14923527
ACA1_307840	CDS	ACA1_307840	NW_004457625.1	22017	23278	D	encoded by transcript ACA1_307840A; methyltransferase domain containing protein	join(22017..22068,22079..22174,22249..22683,22758..22944,23038..23278)	Acanthamoeba castellanii str. Neff	14923528
ACA1_307850	CDS	ACA1_307850	NW_004457625.1	23395	25014	D	encoded by transcript ACA1_307850A; uncharacterized protein	join(23395..23442,23464..23598,23742..24249,24343..24406,24489..24592,24687..24721,24829..25014)	Acanthamoeba castellanii str. Neff	14923529
ACA1_307860	CDS	ACA1_307860	NW_004457625.1	25327	26822	R	encoded by transcript ACA1_307860A; uncharacterized protein	complement(join(25327..25503,25697..25823,25922..26445,26517..26822))	Acanthamoeba castellanii str. Neff	14923530
ACA1_307870	CDS	ACA1_307870	NW_004457625.1	27501	28847	D	encoded by transcript ACA1_307870A; HemolysinIII related subfamily protein	join(27501..27756,27857..28046,28169..28374,28455..28645,28737..28847)	Acanthamoeba castellanii str. Neff	14923531
ACA1_307880	CDS	ACA1_307880	NW_004457625.1	29056	31289	R	encoded by transcript ACA1_307880A; uncharacterized protein	complement(join(29056..29213,29366..29490,29580..29671,29800..29952,30156..30308,30579..30787,30923..31289))	Acanthamoeba castellanii str. Neff	14923534
ACA1_307890	CDS	ACA1_307890	NW_004457625.1	31559	32774	R	encoded by transcript ACA1_307890A; fatty acid elongase	complement(join(31559..32095,32442..32774))	Acanthamoeba castellanii str. Neff	14923535
ACA1_307900	CDS	ACA1_307900	NW_004457625.1	33095	35595	R	encoded by transcript ACA1_307900A; uncharacterized protein	complement(join(33095..33626,33680..34089,34169..34332,34405..34462,34533..34796,34876..34980,35066..35236,35305..35595))	Acanthamoeba castellanii str. Neff	14923536
ACA1_307910	CDS	ACA1_307910	NW_004457625.1	36023	39303	R	encoded by transcript ACA1_307910A; uncharacterized protein	complement(join(36023..36238,36253..36473,36538..36642,36717..36900,36986..37095,37174..37342,37434..37505,37621..37728,37804..38010,38082..38378,38441..38567,38669..39084,39175..39303))	Acanthamoeba castellanii str. Neff	14923537
ACA1_307920	CDS	ACA1_307920	NW_004457625.1	39785	40870	D	encoded by transcript ACA1_307920A; uncharacterized protein	39785..40870	Acanthamoeba castellanii str. Neff	14923538
ACA1_307930	CDS	ACA1_307930	NW_004457625.1	41356	41802	D	encoded by transcript ACA1_307930A; uncharacterized protein	41356..>41802	Acanthamoeba castellanii str. Neff	14923539
ACA1_348220	CDS	ACA1_348220	NW_004457738.1	14698	15532	R	encoded by transcript ACA1_348220A; uncharacterized protein	complement(join(14698..14890,15017..15142,15456..15532))	Acanthamoeba castellanii str. Neff	14926823
ACA1_315740	CDS	ACA1_315740	NW_004457623.1	84	895	D	encoded by transcript ACA1_315740A; uncharacterized protein	join(84..497,617..895)	Acanthamoeba castellanii str. Neff	14923525
ACA1_315750	CDS	ACA1_315750	NW_004457623.1	1508	2091	D	encoded by transcript ACA1_315750A; uncharacterized protein	join(1508..1708,1774..1874,1956..2091)	Acanthamoeba castellanii str. Neff	14923519
ACA1_315760	CDS	ACA1_315760	NW_004457623.1	3572	4342	R	encoded by transcript ACA1_315760A; ribosomal protein L13, putative	complement(join(3572..4023,4094..4148,4235..4342))	Acanthamoeba castellanii str. Neff	14923520
ACA1_315770	CDS	ACA1_315770	NW_004457623.1	4553	7040	D	encoded by transcript ACA1_315770A; uncharacterized protein	join(4553..4583,4754..4906,5043..5116,5221..5290,5388..5442,5575..5653,5785..5864,5947..6041,6151..6220,6316..6692,6820..7040)	Acanthamoeba castellanii str. Neff	14923521
ACA1_315780	CDS	ACA1_315780	NW_004457623.1	7311	7871	D	encoded by transcript ACA1_315780A; uncharacterized protein	join(7311..7371,7451..7650,7761..7871)	Acanthamoeba castellanii str. Neff	14923517
ACA1_315790	CDS	ACA1_315790	NW_004457623.1	8198	9098	R	encoded by transcript ACA1_315790A; copper transport accessory protein	complement(join(8198..8257,8327..8431,8498..8548,8619..8714,8779..8870,8951..9098))	Acanthamoeba castellanii str. Neff	14923518
ACA1_315800	CDS	ACA1_315800	NW_004457623.1	9648	12156	R	encoded by transcript ACA1_315800A; threonine-tRNA ligase	complement(join(9648..9941,10032..10285,10390..10628,10735..11890,11982..12156))	Acanthamoeba castellanii str. Neff	14923522
ACA1_315810	CDS	ACA1_315810	NW_004457623.1	12343	13992	R	encoded by transcript ACA1_315810A; uncharacterized protein	complement(join(12343..12501,12650..12784,12878..12956,13041..13161,13225..13287,13364..13421,13535..13582,13655..13794,13929..13992))	Acanthamoeba castellanii str. Neff	14923523
ACA1_315820	CDS	ACA1_315820	NW_004457623.1	14138	17069	D	encoded by transcript ACA1_315820A; uncharacterized protein	join(14138..14190,14382..14459,14607..14907,15034..15124,15220..15314,15409..15616,15720..15860,15946..16157,16288..16448,16540..16610,16696..17069)	Acanthamoeba castellanii str. Neff	14923524
ACA1_141300	CDS	ACA1_141300	NW_004457620.1	2948	3156	D	encoded by transcript ACA1_141300A; uncharacterized protein	<2948..>3156	Acanthamoeba castellanii str. Neff	14923421
ACA1_141310	CDS	ACA1_141310	NW_004457620.1	3377	4214	R	encoded by transcript ACA1_141310A; uncharacterized protein	complement(join(3377..3549,3637..3746,3876..3974,4108..4214))	Acanthamoeba castellanii str. Neff	14923422
ACA1_141420	CDS	ACA1_141420	NW_004457620.1	5690	7000	R	encoded by transcript ACA1_141420A; NAD dependent epimerase/dehydratase family protein	complement(join(5690..5998,6088..6357,6457..6653,6778..7000))	Acanthamoeba castellanii str. Neff	14923443
ACA1_141530	CDS	ACA1_141530	NW_004457620.1	9652	10926	R	encoded by transcript ACA1_141530A; NAD dependent epimerase/dehydratase family protein	complement(join(9652..9963,10042..10311,10376..10572,10704..10926))	Acanthamoeba castellanii str. Neff	14923444
ACA1_141540	CDS	ACA1_141540	NW_004457620.1	11818	14751	D	encoded by transcript ACA1_141540A; uncharacterized protein	join(11818..11913,11997..12096,12166..12203,12303..12392,12464..12536,12637..12703,12790..12897,12996..13095,13184..13241,13314..13441,13522..13608,13704..13763,13848..13928,14138..14184,14255..14378,14453..14516,14603..14751)	Acanthamoeba castellanii str. Neff	14923445
ACA1_141550	CDS	ACA1_141550	NW_004457620.1	14884	17957	R	encoded by transcript ACA1_141550A; ribosome biogenesis GTPase Der, putative	complement(join(14884..15047,15163..15327,15404..15476,15591..15781,15867..15953,16036..16320,16415..16549,16603..16797,16873..16999,17111..17245,17352..17469,17569..17957))	Acanthamoeba castellanii str. Neff	14923446
ACA1_141560	CDS	ACA1_141560	NW_004457620.1	18196	19139	D	encoded by transcript ACA1_141560A; queuine trnaribosyltransferase subfamily protein	join(18196..18387,18817..18907,18994..>19139)	Acanthamoeba castellanii str. Neff	14923447
ACA1_141770	CDS	ACA1_141770	NW_004457620.1	20399	20638	R	encoded by transcript ACA1_141770A; Tim10/DDP family zinc finger superfamily protein	complement(<20399..20638)	Acanthamoeba castellanii str. Neff	14923448
ACA1_141780	CDS	ACA1_141780	NW_004457620.1	20813	22352	D	encoded by transcript ACA1_141780A; crystallin, zeta, putative	join(20813..20897,21056..21099,21128..21346,21436..21548,21617..21735,21815..22055,22136..22352)	Acanthamoeba castellanii str. Neff	14923449
ACA1_141790	CDS	ACA1_141790	NW_004457620.1	22590	24515	D	encoded by transcript ACA1_141790A; uncharacterized protein	join(22590..22769,22893..23199,23324..23403,23527..23736,23840..24342,24413..24515)	Acanthamoeba castellanii str. Neff	14923450
ACA1_141800	CDS	ACA1_141800	NW_004457620.1	24646	25401	R	encoded by transcript ACA1_141800A; uncharacterized protein	complement(join(24646..24818,24927..25029,25144..25401))	Acanthamoeba castellanii str. Neff	14923451
ACA1_141810	CDS	ACA1_141810	NW_004457620.1	25575	26812	R	encoded by transcript ACA1_141810A; uncharacterized protein	complement(join(25575..26156,26268..26334,26357..26559,26654..26812))	Acanthamoeba castellanii str. Neff	14923452
ACA1_141820	CDS	ACA1_141820	NW_004457620.1	26922	27143	R	encoded by transcript ACA1_141820A; uncharacterized protein	complement(26922..27143)	Acanthamoeba castellanii str. Neff	14923453
ACA1_141840	CDS	ACA1_141840	NW_004457620.1	30122	36890	D	encoded by transcript ACA1_141840A; uncharacterized protein	join(30122..30247,30430..31247,31316..31443,31545..31643,31723..32555,32703..33302,33404..33414,33466..33752,33847..33906,34056..34220,34341..34819,34904..35701,35769..36194,36284..36605,36676..36890)	Acanthamoeba castellanii str. Neff	14923455
ACA1_141850	CDS	ACA1_141850	NW_004457620.1	36970	37918	R	encoded by transcript ACA1_141850A; NAD(P)H:quinone oxidoreductase, type IV, putative	complement(join(36970..37157,37248..37536,37666..37817,37894..37918))	Acanthamoeba castellanii str. Neff	14923456
ACA1_141860	CDS	ACA1_141860	NW_004457620.1	38807	39535	D	encoded by transcript ACA1_141860A; Fbox domain containing protein	join(38807..38978,39078..39320,39417..39535)	Acanthamoeba castellanii str. Neff	14923423
ACA1_141870	CDS	ACA1_141870	NW_004457620.1	39686	40358	R	encoded by transcript ACA1_141870A; uncharacterized protein	complement(join(39686..39759,39823..39923,40009..40358))	Acanthamoeba castellanii str. Neff	14923424
ACA1_141880	CDS	ACA1_141880	NW_004457620.1	40594	42475	D	encoded by transcript ACA1_141880A; RNA editing ligase	join(40594..40670,40763..40829,40910..41123,41212..41471,41569..41724,41819..41922,42032..42168,42261..42475)	Acanthamoeba castellanii str. Neff	14923425
ACA1_141890	CDS	ACA1_141890	NW_004457620.1	42619	43827	R	encoded by transcript ACA1_141890A; PH domain containing protein	complement(join(42619..42966,43123..43231,43331..43416,43540..43827))	Acanthamoeba castellanii str. Neff	14923426
ACA1_141900	CDS	ACA1_141900	NW_004457620.1	44167	45599	R	encoded by transcript ACA1_141900A; uncharacterized protein	complement(join(44167..44262,44360..44482,44590..44751,44878..45088,45270..45421,45495..45599))	Acanthamoeba castellanii str. Neff	14923427
ACA1_141910	CDS	ACA1_141910	NW_004457620.1	45679	48737	R	encoded by transcript ACA1_141910A; alpha/beta hydrolase fold domain containing protein	complement(join(45679..45971,46057..46657,46734..46926,46940..47394,47478..47644,47760..47947,48111..48177,48263..48737))	Acanthamoeba castellanii str. Neff	14923428
ACA1_141920	CDS	ACA1_141920	NW_004457620.1	49276	52159	D	encoded by transcript ACA1_141920A; F-box domain containing protein	join(49276..49452,49582..49733,49811..50020,50053..50276,50384..50488,50595..50815,50903..51079,51213..51446,51540..51623,51760..51778,51795..52159)	Acanthamoeba castellanii str. Neff	14923429
ACA1_141930	CDS	ACA1_141930	NW_004457620.1	52319	52636	R	encoded by transcript ACA1_141930A; uncharacterized protein	complement(52319..52636)	Acanthamoeba castellanii str. Neff	14923430
ACA1_141940	CDS	ACA1_141940	NW_004457620.1	53124	55123	D	encoded by transcript ACA1_141940A; uncharacterized protein	join(53124..53145,53254..53396,53504..53602,53710..53798,53865..53975,54157..54200,54321..54406,54580..54666,54761..55123)	Acanthamoeba castellanii str. Neff	14923431
ACA1_141950	CDS	ACA1_141950	NW_004457620.1	55216	59581	R	encoded by transcript ACA1_141950A; cullinassociated and neddylation-dissociated 1, putative	complement(join(55216..55428,55541..57556,57636..57803,57900..58470,58593..58882,58970..59137,59330..59446,59546..59581))	Acanthamoeba castellanii str. Neff	14923432
ACA1_141960	CDS	ACA1_141960	NW_004457620.1	59873	62970	R	encoded by transcript ACA1_141960A; trafficking protein mon1 subfamily protein	complement(join(59873..60003,60154..60259,60358..60430,60552..61034,61130..61214,61305..61390,61489..61585,61672..61745,61815..61862,61968..62079,62179..62302,62399..62466,62654..62676,62747..62970))	Acanthamoeba castellanii str. Neff	14923433
ACA1_141970	CDS	ACA1_141970	NW_004457620.1	63339	64121	D	encoded by transcript ACA1_141970A; IGR protein motif protein	join(63339..63672,63816..63913,63990..64121)	Acanthamoeba castellanii str. Neff	14923434
ACA1_141980	CDS	ACA1_141980	NW_004457620.1	64343	67206	D	encoded by transcript ACA1_141980A; Peroxin 10 (Pex10), putative	join(64343..64553,64642..64722,64826..65068,65164..65384,65465..65824,66109..66244,66313..66349,66442..66611,66723..66762,66859..66953,67043..67206)	Acanthamoeba castellanii str. Neff	14923435
ACA1_141990	CDS	ACA1_141990	NW_004457620.1	67607	68166	D	encoded by transcript ACA1_141990A; uncharacterized protein	join(67607..67739,67841..67872,67915..68016,68092..68166)	Acanthamoeba castellanii str. Neff	14923436
ACA1_142000	CDS	ACA1_142000	NW_004457620.1	68320	69511	R	encoded by transcript ACA1_142000A; uncharacterized protein	complement(join(68320..68394,68508..68893,68981..69364,69448..69511))	Acanthamoeba castellanii str. Neff	14923437
ACA1_142010	CDS	ACA1_142010	NW_004457620.1	69748	70151	D	encoded by transcript ACA1_142010A; BolA2 protein	join(69748..69819,69954..70151)	Acanthamoeba castellanii str. Neff	14923438
ACA1_142020	CDS	ACA1_142020	NW_004457620.1	70386	70640	R	encoded by transcript ACA1_142020A; uncharacterized protein	complement(70386..70640)	Acanthamoeba castellanii str. Neff	14923439
ACA1_142030	CDS	ACA1_142030	NW_004457620.1	70784	74691	D	encoded by transcript ACA1_142030A; SET domain containing protein	join(70784..71155,71229..71423,71522..71984,72084..72192,72330..72444,72539..72633,72793..72936,73024..73207,73327..73436,73533..74691)	Acanthamoeba castellanii str. Neff	14923440
ACA1_142040	CDS	ACA1_142040	NW_004457620.1	74787	75342	D	encoded by transcript ACA1_142040A; uncharacterized protein	join(74787..75033,75106..75203,75298..75342)	Acanthamoeba castellanii str. Neff	14923441
ACA1_142050	CDS	ACA1_142050	NW_004457620.1	76140	78546	D	encoded by transcript ACA1_142050A; uncharacterized protein	join(76140..76215,76409..76494,76644..76729,76844..76905,76973..77181,77298..77388,77906..77965,78042..78168,78305..78407,78508..78546)	Acanthamoeba castellanii str. Neff	14923442
ACA1_142070	CDS	ACA1_142070	NW_004457620.1	82054	83575	R	encoded by transcript ACA1_142070A; leucine rich repeat domain containing protein	complement(join(82054..82133,82255..83009,83103..83237,83364..83575))	Acanthamoeba castellanii str. Neff	14923458
ACA1_142080	CDS	ACA1_142080	NW_004457620.1	83936	84340	R	encoded by transcript ACA1_142080A; uncharacterized protein	complement(83936..84340)	Acanthamoeba castellanii str. Neff	14923459
ACA1_142090	CDS	ACA1_142090	NW_004457620.1	84779	85943	D	encoded by transcript ACA1_142090A; rRNA metabolism protein, SBDS family	join(84779..84963,85041..85159,85247..85447,85560..85673,85756..85943)	Acanthamoeba castellanii str. Neff	14923460
ACA1_142100	CDS	ACA1_142100	NW_004457620.1	86497	87018	R	encoded by transcript ACA1_142100A; uncharacterized protein	complement(86497..87018)	Acanthamoeba castellanii str. Neff	14923461
ACA1_142110	CDS	ACA1_142110	NW_004457620.1	87405	88238	R	encoded by transcript ACA1_142110A; Znfinger in Ran binding protein and others domain containing protein	complement(join(87405..87642,87811..88238))	Acanthamoeba castellanii str. Neff	14923462
ACA1_142120	CDS	ACA1_142120	NW_004457620.1	88637	89457	D	encoded by transcript ACA1_142120A; uncharacterized protein	join(88637..88723,89202..89290,89409..89457)	Acanthamoeba castellanii str. Neff	14923463
ACA1_142130	CDS	ACA1_142130	NW_004457620.1	89834	91905	D	encoded by transcript ACA1_142130A; Oxysterolbinding protein 9, putative	join(89834..90072,90157..90233,90321..90404,90468..90851,90929..91043,91152..91230,91379..91437,91580..91705,91797..91905)	Acanthamoeba castellanii str. Neff	14923464
ACA1_142140	CDS	ACA1_142140	NW_004457620.1	92249	95041	D	encoded by transcript ACA1_142140A; phospholipase D/transphosphatidylase	join(92249..92346,92447..92647,92749..92888,92946..92998,93099..93237,93340..93477,93609..93764,93837..94023,94091..94197,94283..94419,94518..94671,94792..94875,94971..95041)	Acanthamoeba castellanii str. Neff	14923465
ACA1_142150	CDS	ACA1_142150	NW_004457620.1	97251	99294	D	encoded by transcript ACA1_142150A; His Kinase A (phosphoacceptor) domain containing protein	join(97251..97286,97369..97456,97578..97751,97864..97965,98072..98215,98325..98446,98527..98760,98875..99294)	Acanthamoeba castellanii str. Neff	14923466
ACA1_142160	CDS	ACA1_142160	NW_004457620.1	99374	101525	D	encoded by transcript ACA1_142160A; uncharacterized protein	join(99374..99497,99600..99687,99821..99906,100016..100363,100421..100639,100739..100851,100870..100937,101062..101234,101380..101525)	Acanthamoeba castellanii str. Neff	14923467
ACA1_142170	CDS	ACA1_142170	NW_004457620.1	101806	102775	D	encoded by transcript ACA1_142170A; uncharacterized protein	join(101806..101838,101868..102011,102320..102775)	Acanthamoeba castellanii str. Neff	14923468
ACA1_142180	CDS	ACA1_142180	NW_004457620.1	103005	103549	D	encoded by transcript ACA1_142180A; uncharacterized protein	join(103005..103235,103262..103549)	Acanthamoeba castellanii str. Neff	14923469
ACA1_142190	CDS	ACA1_142190	NW_004457620.1	103628	104417	D	encoded by transcript ACA1_142190A; response regulator receiver domain containing protein	join(103628..103813,103915..103981,104094..104210,104305..104417)	Acanthamoeba castellanii str. Neff	14923470
ACA1_142200	CDS	ACA1_142200	NW_004457620.1	104788	108979	D	encoded by transcript ACA1_142200A; uncharacterized protein	join(104788..105938,106047..106152,106247..106381,106486..106555,106665..106884,106962..107063,107147..107260,107340..107420,107561..107987,108114..108254,108320..108411,108555..108695,108769..108979)	Acanthamoeba castellanii str. Neff	14923471
ACA1_142210	CDS	ACA1_142210	NW_004457620.1	110272	115377	R	encoded by transcript ACA1_142210A; uncharacterized protein	complement(join(110272..110636,110729..110848,110934..111090,111211..111375,111435..111583,111693..111802,111905..112200,112302..112415,112525..112734,112815..113125,113229..113384,113452..113594,113684..113755,113872..114002,114124..114159,114259..114381,114485..114677,114789..114901,115091..115179,115260..115377))	Acanthamoeba castellanii str. Neff	14923472
ACA1_142220	CDS	ACA1_142220	NW_004457620.1	115582	116469	R	encoded by transcript ACA1_142220A; Yip1 domain family, member 5, putative	complement(join(115582..115926,116004..116149,116244..116469))	Acanthamoeba castellanii str. Neff	14923473
ACA1_142230	CDS	ACA1_142230	NW_004457620.1	116892	117238	R	encoded by transcript ACA1_142230A; uncharacterized protein	complement(join(116892..116932,117064..117238))	Acanthamoeba castellanii str. Neff	14923474
ACA1_142240	CDS	ACA1_142240	NW_004457620.1	117468	121474	R	encoded by transcript ACA1_142240A; actin subfamily protein	complement(join(117468..117580,117708..117821,117915..118133,118247..118384,118470..118560,118654..118807,118890..118936,119014..119168,119279..120050,120151..120297,120455..120657,120773..120865,121001..121270,121471..121474))	Acanthamoeba castellanii str. Neff	14923475
ACA1_142250	CDS	ACA1_142250	NW_004457620.1	122366	122833	R	encoded by transcript ACA1_142250A; uncharacterized protein	complement(join(122366..122450,122514..122652,122731..122833))	Acanthamoeba castellanii str. Neff	14923476
ACA1_142260	CDS	ACA1_142260	NW_004457620.1	123205	125006	R	encoded by transcript ACA1_142260A; exodeoxyribonuclease III, putative	complement(join(123205..123332,123428..123503,123605..123679,123778..123819,123940..124033,124150..124296,124392..124610,124728..124762,124869..125006))	Acanthamoeba castellanii str. Neff	14923477
ACA1_142270	CDS	ACA1_142270	NW_004457620.1	125667	126721	D	encoded by transcript ACA1_142270A; mob as tumor suppressorlike protein	join(125667..125787,125911..126004,126120..126250,126360..126502,126626..126721)	Acanthamoeba castellanii str. Neff	14923478
ACA1_142280	CDS	ACA1_142280	NW_004457620.1	126868	128335	R	encoded by transcript ACA1_142280A; uncharacterized protein	complement(join(126868..126993,127108..127241,127332..127547,127636..127804,127848..127948,128098..128335))	Acanthamoeba castellanii str. Neff	14923479
ACA1_142290	CDS	ACA1_142290	NW_004457620.1	128453	131306	R	encoded by transcript ACA1_142290A; uncharacterized protein	complement(join(128453..128462,128497..129561,129680..129809,129921..130110,130215..130343,130464..130545,130670..130744,130811..130873,131003..131095,131176..131306))	Acanthamoeba castellanii str. Neff	14923480
ACA1_142300	CDS	ACA1_142300	NW_004457620.1	131562	133300	R	encoded by transcript ACA1_142300A; eukaryotic translation initiation factor 3, subunit 3 gamma, 40kDa isoform 1, putative	complement(join(131562..131768,131897..131994,132094..132269,132390..132478,132592..132755,132857..133031,133181..133300))	Acanthamoeba castellanii str. Neff	14923481
ACA1_142310	CDS	ACA1_142310	NW_004457620.1	133485	136075	D	encoded by transcript ACA1_142310A; WD domain, Gbeta repeat-containing protein	join(133485..133588,133747..133755,133862..134008,134168..134418,134523..134686,134835..135088,135206..135302,135407..135559,135646..135734,135844..136075)	Acanthamoeba castellanii str. Neff	14923482
ACA1_142320	CDS	ACA1_142320	NW_004457620.1	136285	136829	D	encoded by transcript ACA1_142320A; uncharacterized protein	join(136285..136569,136707..136829)	Acanthamoeba castellanii str. Neff	14923483
ACA1_142330	CDS	ACA1_142330	NW_004457620.1	137317	138526	R	encoded by transcript ACA1_142330A; peptidyltRNA hydrolase domain containing protein	complement(join(137317..137877,137998..138078,138185..138526))	Acanthamoeba castellanii str. Neff	14923484
ACA1_142340	CDS	ACA1_142340	NW_004457620.1	138897	143371	D	encoded by transcript ACA1_142340A; SAM domain (Sterile alpha motif) domain containing protein	join(138897..139087,139237..139327,139476..139569,139654..139699,140214..140319,140440..140680,140772..140860,140953..141036,141135..141221,141305..141359,141491..141607,141726..141840,141945..141969,142101..142277,142403..142658,142779..143371)	Acanthamoeba castellanii str. Neff	14923485
ACA1_142350	CDS	ACA1_142350	NW_004457620.1	143677	145279	D	encoded by transcript ACA1_142350A; calreticulin, putative	join(143677..143761,143870..144173,144302..144461,144602..145279)	Acanthamoeba castellanii str. Neff	14923486
ACA1_142360	CDS	ACA1_142360	NW_004457620.1	146941	150786	R	encoded by transcript ACA1_142360A; uncharacterized protein	complement(join(146941..147012,147102..147192,147278..147489,147632..147869,147954..149290,149384..149443,149581..149679,149801..150091,150388..150786))	Acanthamoeba castellanii str. Neff	14923487
ACA1_142370	CDS	ACA1_142370	NW_004457620.1	150972	153361	R	encoded by transcript ACA1_142370A; serine hydroxymethyltransferase	complement(join(150972..151037,151148..151236,151333..151472,151568..151634,151727..151826,151923..152293,152388..152533,152617..152635,152758..152902,153021..153137,153245..153361))	Acanthamoeba castellanii str. Neff	14923488
ACA1_142380	CDS	ACA1_142380	NW_004457620.1	153751	154936	D	encoded by transcript ACA1_142380A; uncharacterized protein	join(153751..153978,154074..154231,154332..154514,154595..154715,154793..154936)	Acanthamoeba castellanii str. Neff	14923489
ACA1_142390	CDS	ACA1_142390	NW_004457620.1	155631	158404	R	encoded by transcript ACA1_142390A; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase	complement(join(155631..155837,155958..156014,156169..156331,156429..156566,156675..156760,156871..156965,157108..157233,157358..157562,157677..157897,157982..158020,158164..158225,158292..158404))	Acanthamoeba castellanii str. Neff	14923490
ACA1_142400	CDS	ACA1_142400	NW_004457620.1	158656	161302	D	encoded by transcript ACA1_142400A; Plus3 domain containing protein	join(158656..158724,158810..159075,159204..159322,159403..159662,159749..159959,160035..160282,160385..160618,160688..161044,161183..161302)	Acanthamoeba castellanii str. Neff	14923491
ACA1_142420	CDS	ACA1_142420	NW_004457620.1	171220	172713	D	encoded by transcript ACA1_142420A; Proteintyrosine phosphatase	171220..172713	Acanthamoeba castellanii str. Neff	14923493
ACA1_142430	CDS	ACA1_142430	NW_004457620.1	172930	177410	R	encoded by transcript ACA1_142430A; HEAT repeat domain containing protein	complement(join(172930..173506,173787..173986,174551..174743,174854..174924,175326..175521,175700..175781,175898..175989,176139..176262,176319..176349,176559..176720,176837..176983,177171..177410))	Acanthamoeba castellanii str. Neff	14923494
ACA1_142550	CDS	ACA1_142550	NW_004457620.1	179074	180065	R	encoded by transcript ACA1_142550A; uncharacterized protein	complement(join(179074..179284,179380..179453,179550..179684,179773..179866,179977..180065))	Acanthamoeba castellanii str. Neff	14923496
ACA1_142560	CDS	ACA1_142560	NW_004457620.1	181601	185274	D	encoded by transcript ACA1_142560A; Ehepsin, putative	join(181601..181629,181733..181800,181904..182092,182274..182341,182529..182804,183018..183174,183403..183561,183739..184172,184307..184441,184594..185274)	Acanthamoeba castellanii str. Neff	14923497
ACA1_142570	CDS	ACA1_142570	NW_004457620.1	185291	185953	D	encoded by transcript ACA1_142570A; uncharacterized protein	join(185291..185375,185583..185727,185794..185953)	Acanthamoeba castellanii str. Neff	14923498
ACA1_142580	CDS	ACA1_142580	NW_004457620.1	186073	190552	R	encoded by transcript ACA1_142580A; autophagy protein, putative	complement(join(186073..186198,186380..186484,186644..186719,186834..186949,187072..187215,187541..187609,187706..187912,188135..188279,188421..188532,188717..188912,189058..189339,189541..189732,189837..189872,189945..190053,190229..190421,190459..190552))	Acanthamoeba castellanii str. Neff	14923499
ACA1_142590	CDS	ACA1_142590	NW_004457620.1	191314	194631	D	encoded by transcript ACA1_142590A; Sel1 repeat-containing protein	join(191314..191383,191430..191608,191770..191916,192021..192162,192295..192443,192579..192689,192755..192857,192974..193123,193241..193402,193540..193747,193923..194129,194240..194423,194551..194631)	Acanthamoeba castellanii str. Neff	14923500
ACA1_142600	CDS	ACA1_142600	NW_004457620.1	195597	199016	D	encoded by transcript ACA1_142600A; villin headpiece domain containing protein	join(195597..195866,195967..196265,196378..196459,196772..198585,198653..198773,198903..199016)	Acanthamoeba castellanii str. Neff	14923501
ACA1_142610	CDS	ACA1_142610	NW_004457620.1	199126	201614	R	encoded by transcript ACA1_142610A; Myblike DNA-binding domain containing protein	complement(join(199126..199733,199830..199927,200078..200146,200279..200466,200548..200722,200902..201016,201135..201225,201351..201614))	Acanthamoeba castellanii str. Neff	14923502
ACA1_142620	CDS	ACA1_142620	NW_004457620.1	201814	203934	D	encoded by transcript ACA1_142620A; ATPdependent RNA helicase dbp2, putative	201814..203934	Acanthamoeba castellanii str. Neff	14923503
ACA1_142630	CDS	ACA1_142630	NW_004457620.1	204651	205906	D	encoded by transcript ACA1_142630A; protein phosphatase 2A catalytic subunit	join(204651..204743,204813..205022,205102..205166,205290..205769,205816..205906)	Acanthamoeba castellanii str. Neff	14923504
ACA1_142640	CDS	ACA1_142640	NW_004457620.1	208180	211032	R	encoded by transcript ACA1_142640A; uncharacterized protein	complement(join(208180..208932,209080..209175,209278..209347,209608..209800,210023..210198,210336..210515,210638..210697,210854..211032))	Acanthamoeba castellanii str. Neff	14923505
ACA1_142650	CDS	ACA1_142650	NW_004457620.1	211336	213187	R	encoded by transcript ACA1_142650A; RhoGAP domain containing protein	complement(join(211336..211448,211664..211865,212058..212248,212325..212373,212612..212860,212984..213003,213076..213187))	Acanthamoeba castellanii str. Neff	14923506
ACA1_142660	CDS	ACA1_142660	NW_004457620.1	213327	216282	D	encoded by transcript ACA1_142660A; RNA recognition motif domain containing protein	join(213327..213510,213730..214040,214237..214302,214474..214539,214681..214817,214883..214924,215056..215121,215332..215512,215622..215774,215926..216282)	Acanthamoeba castellanii str. Neff	14923507
ACA1_142670	CDS	ACA1_142670	NW_004457620.1	216566	218565	R	encoded by transcript ACA1_142670A; zinc finger, c2h2 type domain containing protein	complement(join(216566..216691,216812..216978,217354..217799,217961..218155,218301..218363,218438..218565))	Acanthamoeba castellanii str. Neff	14923508
ACA1_142680	CDS	ACA1_142680	NW_004457620.1	218684	221132	D	encoded by transcript ACA1_142680A; serologically defined breast cancer antigen 84 isoform 1, putative	join(218684..218746,218827..218869,219111..219188,219289..219402,219563..219694,219888..219988,220206..220299,220421..220477,220595..220858,221011..221132)	Acanthamoeba castellanii str. Neff	14923509
ACA1_142690	CDS	ACA1_142690	NW_004457620.1	221277	223136	D	encoded by transcript ACA1_142690A; pinin/SDK/memA/ protein region protein, putative	join(221277..221312,221330..221433,221567..221837,222221..222454,222552..222701,222807..223136)	Acanthamoeba castellanii str. Neff	14923510
ACA1_142810	CDS	ACA1_142810	NW_004457620.1	242013	243312	R	encoded by transcript ACA1_142810A; signal peptidase I, putative	complement(join(242013..242121,242260..242379,242846..242992,243155..243312))	Acanthamoeba castellanii str. Neff	14923512
ACA1_142820	CDS	ACA1_142820	NW_004457620.1	243471	245238	D	encoded by transcript ACA1_142820A; methyltransferase domain containing protein	join(243471..243659,243734..243751,243945..243988,244084..244159,244267..244392,244489..244627,244694..244728,244796..244827,244902..245020,245102..245238)	Acanthamoeba castellanii str. Neff	14923513
ACA1_142830	CDS	ACA1_142830	NW_004457620.1	245394	245612	D	encoded by transcript ACA1_142830A; uncharacterized protein	245394..245612	Acanthamoeba castellanii str. Neff	14923514
ACA1_142840	CDS	ACA1_142840	NW_004457620.1	245756	247514	R	encoded by transcript ACA1_142840A; uncharacterized protein	complement(join(245756..245796,245870..246031,246137..246375,246487..246619,246731..247514))	Acanthamoeba castellanii str. Neff	14923515
ACA1_322520	CDS	ACA1_322520	NW_004457619.1	908	5284	R	encoded by transcript ACA1_322520A; RasGEF domain containing protein	complement(join(908..2220,2359..3128,3252..3344,3458..3637,3738..4697,4786..4851,5013..5284))	Acanthamoeba castellanii str. Neff	14923420
ACA1_322530	CDS	ACA1_322530	NW_004457619.1	5822	10141	R	encoded by transcript ACA1_322530A; RhoGEF domain containing protein	complement(join(5822..6021,6144..6245,6355..6499,6573..6677,6739..6921,7009..7083,7180..7249,7327..7440,7564..7637,7713..7891,7935..8208,8305..8970,9145..9311,9394..9480,9628..9703,9995..10141))	Acanthamoeba castellanii str. Neff	14923412
ACA1_322540	CDS	ACA1_322540	NW_004457619.1	10672	11377	R	encoded by transcript ACA1_322540A; uncharacterized protein	complement(join(10672..10691,10801..10972,11062..11238,11276..11377))	Acanthamoeba castellanii str. Neff	14923414
ACA1_322550	CDS	ACA1_322550	NW_004457619.1	11876	16588	D	encoded by transcript ACA1_322550A; uncharacterized protein	join(11876..12154,12437..12561,12799..12880,12968..13080,13157..13257,13356..13445,13552..13733,13797..13974,14059..14225,14368..14512,14623..14734,14825..14996,15105..15263,15325..15429,15530..16119,16203..16269,16346..16405,16508..16588)	Acanthamoeba castellanii str. Neff	14923413
ACA1_322560	CDS	ACA1_322560	NW_004457619.1	17193	21052	D	encoded by transcript ACA1_322560A; elongation factor Tu GTP binding domain containing protein	join(17193..19372,19446..19665,19737..20050,20146..20728,20822..21052)	Acanthamoeba castellanii str. Neff	14923415
ACA1_322570	CDS	ACA1_322570	NW_004457619.1	21496	23391	D	encoded by transcript ACA1_322570A; Hsp40, putative	join(21496..21627,21769..22046,22186..22299,22410..22525,22629..22732,22821..23087,23164..23391)	Acanthamoeba castellanii str. Neff	14923416
ACA1_322580	CDS	ACA1_322580	NW_004457619.1	23603	24042	D	encoded by transcript ACA1_322580A; calmodulin, putative	join(23603..23648,23758..23825,23935..24042)	Acanthamoeba castellanii str. Neff	14923417
ACA1_322690	CDS	ACA1_322690	NW_004457619.1	28806	30297	D	encoded by transcript ACA1_322690A; thioredoxinlike 1, putative	join(28806..28915,29014..29089,29198..29398,29517..29709,29792..29927,30033..30171,30265..30297)	Acanthamoeba castellanii str. Neff	14923419
ACA1_322700	CDS	ACA1_322700	NW_004457619.1	30587	33426	D	encoded by transcript ACA1_322700A; GTPase-activator protein for Ras family GTPase	join(30587..31616,31699..31779,31854..32032,32109..32271,32369..32475,32515..32579,32663..32814,32887..32993,33079..33192,33271..33426)	Acanthamoeba castellanii str. Neff	14923418
ACA1_322710	CDS	ACA1_322710	NW_004457619.1	33472	35119	D	encoded by transcript ACA1_322710A; V4R domain containing protein	join(33472..33555,33620..33728,33806..33899,33987..34076,34156..34283,34448..34512,34580..34694,34772..34853,34945..35119)	Acanthamoeba castellanii str. Neff	14923407
ACA1_322720	CDS	ACA1_322720	NW_004457619.1	35167	36795	D	encoded by transcript ACA1_322720A; uncharacterized protein	join(35167..35206,35311..35447,35535..35688,35775..35894,35962..36068,36151..36397,36515..36795)	Acanthamoeba castellanii str. Neff	14923408
ACA1_322730	CDS	ACA1_322730	NW_004457619.1	37157	38879	D	encoded by transcript ACA1_322730A; CCAAT/enhancer-binding family protein	join(37157..37427,37892..37950,38067..38159,38247..38343,38422..38535,38635..38718,38797..38879)	Acanthamoeba castellanii str. Neff	14923409
ACA1_322740	CDS	ACA1_322740	NW_004457619.1	39272	40084	D	encoded by transcript ACA1_322740A; uncharacterized protein	39272..40084	Acanthamoeba castellanii str. Neff	14923410
ACA1_322750	CDS	ACA1_322750	NW_004457619.1	40581	46996	D	encoded by transcript ACA1_322750A; uncharacterized protein	join(40581..40678,40795..46996)	Acanthamoeba castellanii str. Neff	14923411
ACA1_322770	CDS	ACA1_322770	NW_004457619.1	50453	56030	R	encoded by transcript ACA1_322770A; GTPaseactivator protein for Ras-like GTPase	complement(join(50453..50635,50789..50979,51057..51181,51252..51324,51413..51545,51630..51739,51814..51930,52027..52145,52249..52414,52574..52681,52764..53574,53689..53874,53955..54062,54183..54242,54338..54459,54529..54634,54690..54751,54856..54938,55010..55072,55137..55252,55375..55445,55546..55598,55667..55782,55929..>56030))	Acanthamoeba castellanii str. Neff	14923403
ACA1_322880	CDS	ACA1_322880	NW_004457619.1	56906	57509	R	encoded by transcript ACA1_322880A; GTPase-activating Rap/Ran-GAP domain family protein 3, putative	complement(join(<56906..57108,57188..57292,57374..57509))	Acanthamoeba castellanii str. Neff	14923404
ACA1_322990	CDS	ACA1_322990	NW_004457619.1	60454	62204	R	encoded by transcript ACA1_322990A; uncharacterized protein	complement(join(60454..60606,60647..60990,61022..61654,61731..61842,62046..62204))	Acanthamoeba castellanii str. Neff	14923405
ACA1_323000	CDS	ACA1_323000	NW_004457619.1	62534	63616	R	encoded by transcript ACA1_323000A; helicase associated domain containing protein	complement(join(62534..62802,62923..>63616))	Acanthamoeba castellanii str. Neff	14923406
ACA1_250410	CDS	ACA1_250410	NW_004457618.1	1386	2783	R	encoded by transcript ACA1_250410A; uncharacterized protein	complement(join(1386..1998,2182..2317,2477..2783))	Acanthamoeba castellanii str. Neff	14923401
ACA1_250420	CDS	ACA1_250420	NW_004457618.1	3814	4384	D	encoded by transcript ACA1_250420A; uncharacterized protein	join(3814..3970,4254..4384)	Acanthamoeba castellanii str. Neff	14923169
ACA1_250430	CDS	ACA1_250430	NW_004457618.1	4636	6867	D	encoded by transcript ACA1_250430A; uncharacterized protein	join(4636..4729,4850..5094,5238..5385,6177..6235,6379..6584,6684..6867)	Acanthamoeba castellanii str. Neff	14923170
ACA1_250540	CDS	ACA1_250540	NW_004457618.1	6951	8936	D	encoded by transcript ACA1_250540A; tau-protein kinase	join(6951..7113,7189..7670,7718..8044,8111..8188,8311..8481,8555..8670,8762..8936)	Acanthamoeba castellanii str. Neff	14923171
ACA1_250550	CDS	ACA1_250550	NW_004457618.1	9716	12259	R	encoded by transcript ACA1_250550A; RecF/RecN/SMC domain containing protein	complement(join(9716..10844,10923..11314,11394..11559,11635..11721,11829..12259))	Acanthamoeba castellanii str. Neff	14923172
ACA1_250560	CDS	ACA1_250560	NW_004457618.1	12487	16198	R	encoded by transcript ACA1_250560A; serine/threonine protein kinase, putative	complement(join(12487..12888,13161..13494,13630..13829,13909..14022,14179..14630,14683..14932,14943..15146,15225..15338,15429..15473,15554..15670,15751..16007,16064..16115,16148..16198))	Acanthamoeba castellanii str. Neff	14923173
ACA1_250670	CDS	ACA1_250670	NW_004457618.1	16554	21450	R	encoded by transcript ACA1_250670A; protein kinase domain containing protein	complement(join(16554..16584,16726..17162,17179..17292,17372..17485,17572..17616,17696..17812,17893..18149,18248..18501,18586..18733,18830..18965,19055..19201,19326..19567,19663..20018,20114..20427,20525..20833,20924..21061,21154..21214,21374..21401,21444..21450))	Acanthamoeba castellanii str. Neff	14923174
ACA1_250780	CDS	ACA1_250780	NW_004457618.1	22409	24348	R	encoded by transcript ACA1_250780A; Fbox domain containing protein	complement(join(22409..22837,23074..23115,23369..23457,23546..23615,23714..23845,23933..24271,24307..24348))	Acanthamoeba castellanii str. Neff	14923175
ACA1_250790	CDS	ACA1_250790	NW_004457618.1	24838	27745	D	encoded by transcript ACA1_250790A; uncharacterized protein	join(24838..25080,25174..25263,25485..25541,25623..25749,25849..25962,26043..26791,26867..26926,27011..27100,27265..27369,27454..27519,27617..27745)	Acanthamoeba castellanii str. Neff	14923176
ACA1_250800	CDS	ACA1_250800	NW_004457618.1	28274	30435	D	encoded by transcript ACA1_250800A; uncharacterized protein	join(28274..29089,29183..29345,29440..29634,29735..29841,29906..30004,30087..30219,30293..30435)	Acanthamoeba castellanii str. Neff	14923177
ACA1_250810	CDS	ACA1_250810	NW_004457618.1	30686	33384	R	encoded by transcript ACA1_250810A; 3phosphoinositide-dependent protein kinase 1, putative	complement(join(30686..30769,30865..31081,31205..31371,31464..31655,31771..31876,31954..32016,32115..32193,32281..32352,32468..32631,32685..32787,32885..33089,33208..33384))	Acanthamoeba castellanii str. Neff	14923178
ACA1_250820	CDS	ACA1_250820	NW_004457618.1	34079	36139	R	encoded by transcript ACA1_250820A; Ankyrin repeatcontaining protein	complement(join(34079..34493,34581..34912,35095..35498,35618..36113,36128..36139))	Acanthamoeba castellanii str. Neff	14923179
ACA1_250830	CDS	ACA1_250830	NW_004457618.1	36546	38977	R	encoded by transcript ACA1_250830A; uncharacterized protein	complement(join(36546..36624,36647..36720,36764..37001,37130..37310,37384..37500,37590..37750,37835..37897,37976..38072,38133..38271,38416..38511,38621..>38977))	Acanthamoeba castellanii str. Neff	14923180
ACA1_250940	CDS	ACA1_250940	NW_004457618.1	39942	42179	R	encoded by transcript ACA1_250940A; uncharacterized protein	complement(join(39942..40094,40339..40742,40854..41046,41317..41720,41848..41978,42070..42179))	Acanthamoeba castellanii str. Neff	14923181
ACA1_251050	CDS	ACA1_251050	NW_004457618.1	42239	44540	R	encoded by transcript ACA1_251050A; Ser/Thr phosphatase family protein	complement(join(42239..42290,42379..42447,42540..42655,42736..42806,42889..43001,43068..43135,43214..43384,43459..43562,43642..43756,43839..44178,44353..44540))	Acanthamoeba castellanii str. Neff	14923182
ACA1_251060	CDS	ACA1_251060	NW_004457618.1	44633	46572	R	encoded by transcript ACA1_251060A; CCAATbox-binding transcription factor, putative	complement(join(44633..44855,44925..45036,45131..45284,45360..45493,45597..45745,45832..45910,45985..46114,46226..46312,46549..46572))	Acanthamoeba castellanii str. Neff	14923183
ACA1_251170	CDS	ACA1_251170	NW_004457618.1	47187	47933	R	encoded by transcript ACA1_251170A; serine/threonineprotein phosphatase	complement(join(47187..47195,47333..47403,47492..47604,47671..47738,47817..47933))	Acanthamoeba castellanii str. Neff	14923184
ACA1_251280	CDS	ACA1_251280	NW_004457618.1	48964	49446	R	encoded by transcript ACA1_251280A; uncharacterized protein	complement(join(48964..49338,49414..49446))	Acanthamoeba castellanii str. Neff	14923185
ACA1_251290	CDS	ACA1_251290	NW_004457618.1	49731	53974	D	encoded by transcript ACA1_251290A; uncharacterized protein	join(49731..49831,49895..49965,50040..50716,50796..50945,51037..51134,51200..51644,51714..51914,51991..53492,53503..53974)	Acanthamoeba castellanii str. Neff	14923186
ACA1_251300	CDS	ACA1_251300	NW_004457618.1	54046	55250	R	encoded by transcript ACA1_251300A; DnaJ domain containing protein	complement(join(54046..54521,54619..54714,54784..54902,55015..55250))	Acanthamoeba castellanii str. Neff	14923187
ACA1_251310	CDS	ACA1_251310	NW_004457618.1	55464	56345	D	encoded by transcript ACA1_251310A; LICD family protein	join(55464..55563,55600..56345)	Acanthamoeba castellanii str. Neff	14923188
ACA1_251320	CDS	ACA1_251320	NW_004457618.1	56475	56906	D	encoded by transcript ACA1_251320A; EF hand domain containing protein	56475..56906	Acanthamoeba castellanii str. Neff	14923189
ACA1_251330	CDS	ACA1_251330	NW_004457618.1	57133	58571	D	encoded by transcript ACA1_251330A; U11/U12 snRNP 48K, putative	join(57133..57219,57294..57419,57498..57682,57723..57819,57896..58078,58185..58571)	Acanthamoeba castellanii str. Neff	14923190
ACA1_251340	CDS	ACA1_251340	NW_004457618.1	58809	61029	D	encoded by transcript ACA1_251340A; uncharacterized protein	join(58809..59147,59281..59420,59536..59635,59673..59710,59786..59910,60055..60308,60394..60575,60636..60760,60834..60897,60975..61029)	Acanthamoeba castellanii str. Neff	14923191
ACA1_251350	CDS	ACA1_251350	NW_004457618.1	61268	63198	R	encoded by transcript ACA1_251350A; eukaryotic phosphomannomutase	complement(join(61268..61372,61467..61544,61627..61734,62390..62470,62555..62650,62748..62824,62946..63057,63133..63198))	Acanthamoeba castellanii str. Neff	14923192
ACA1_251460	CDS	ACA1_251460	NW_004457618.1	63511	64724	D	encoded by transcript ACA1_251460A; U3 small nucleolar ribonucleoprotein component, putative	join(63511..63586,63654..63740,63819..64207,64321..64516,64639..64724)	Acanthamoeba castellanii str. Neff	14923193
ACA1_251480	CDS	ACA1_251480	NW_004457618.1	70364	71339	R	encoded by transcript ACA1_251480A; BRIP1 family protein	complement(join(70364..70525,70686..70769,70852..70995,71055..71128,71240..71339))	Acanthamoeba castellanii str. Neff	14923195
ACA1_251490	CDS	ACA1_251490	NW_004457618.1	72839	73563	D	encoded by transcript ACA1_251490A; uncharacterized protein	join(72839..73079,73163..73271,73530..73563)	Acanthamoeba castellanii str. Neff	14923196
ACA1_251500	CDS	ACA1_251500	NW_004457618.1	75045	75479	R	encoded by transcript ACA1_251500A; uncharacterized protein	complement(join(75045..75287,75331..75371,75419..75479))	Acanthamoeba castellanii str. Neff	14923197
ACA1_251510	CDS	ACA1_251510	NW_004457618.1	77893	78471	D	encoded by transcript ACA1_251510A; uncharacterized protein	join(77893..78010,78089..78471)	Acanthamoeba castellanii str. Neff	14923198
ACA1_251520	CDS	ACA1_251520	NW_004457618.1	78563	78910	R	encoded by transcript ACA1_251520A; uncharacterized protein	complement(join(78563..78577,78637..78753,78813..78886,78898..78910))	Acanthamoeba castellanii str. Neff	14923199
ACA1_251530	CDS	ACA1_251530	NW_004457618.1	79324	80448	R	encoded by transcript ACA1_251530A; uncharacterized protein	complement(join(79324..79334,79423..79546,79600..79714,79839..79911,79987..80135,80210..80290,80378..80448))	Acanthamoeba castellanii str. Neff	14923200
ACA1_251540	CDS	ACA1_251540	NW_004457618.1	80632	81598	D	encoded by transcript ACA1_251540A; uncharacterized protein	join(80632..80673,80937..81006,81092..81177,81292..81478,81576..81598)	Acanthamoeba castellanii str. Neff	14923201
ACA1_251550	CDS	ACA1_251550	NW_004457618.1	81777	83713	R	encoded by transcript ACA1_251550A; 5' nucleotidase family protein	complement(join(81777..81973,82048..82104,82172..82268,82488..82595,82709..82799,82863..83026,83129..83280,83371..83404,83503..83566,83634..83713))	Acanthamoeba castellanii str. Neff	14923202
ACA1_251560	CDS	ACA1_251560	NW_004457618.1	84484	86043	D	encoded by transcript ACA1_251560A; uncharacterized protein	join(84484..84923,85037..85149,85263..85390,85530..85639,85733..85848,85925..86043)	Acanthamoeba castellanii str. Neff	14923203
ACA1_251570	CDS	ACA1_251570	NW_004457618.1	86119	88336	R	encoded by transcript ACA1_251570A; N-ethylmaleimide-sensitive factor isoform 4, putative	complement(join(86119..86313,86397..86704,86793..87039,87130..87246,87316..87517,87534..88122,88186..88336))	Acanthamoeba castellanii str. Neff	14923204
ACA1_251580	CDS	ACA1_251580	NW_004457618.1	88446	89394	R	encoded by transcript ACA1_251580A; uncharacterized protein	complement(join(88446..88682,88768..88873,88950..89057,89138..89394))	Acanthamoeba castellanii str. Neff	14923205
ACA1_251600	CDS	ACA1_251600	NW_004457618.1	92105	92296	R	encoded by transcript ACA1_251600A; uncharacterized protein	complement(92105..92296)	Acanthamoeba castellanii str. Neff	14923207
ACA1_251610	CDS	ACA1_251610	NW_004457618.1	93146	93910	D	encoded by transcript ACA1_251610A; Ferritin, Dps family protein	join(93146..93253,93325..93525,93615..93700,93769..93820,93842..93910)	Acanthamoeba castellanii str. Neff	14923208
ACA1_251620	CDS	ACA1_251620	NW_004457618.1	94176	94910	D	encoded by transcript ACA1_251620A; uncharacterized protein	94176..94910	Acanthamoeba castellanii str. Neff	14923209
ACA1_251640	CDS	ACA1_251640	NW_004457618.1	98064	102330	D	encoded by transcript ACA1_251640A; chloride transporter, chloride channel (ClC) subfamily protein	join(98064..98382,98496..98620,98710..98848,98951..99134,99195..99330,99423..99503,99647..99701,99798..99955,100051..100177,100272..100340,100442..100723,100818..100983,101067..101379,101458..101582,101671..101773,101843..101903,101971..102079,102165..102330)	Acanthamoeba castellanii str. Neff	14923211
ACA1_251650	CDS	ACA1_251650	NW_004457618.1	102967	107889	D	encoded by transcript ACA1_251650A; regulator of chromosome condensation (RCC1) repeat domain containing protein	join(102967..103055,103124..103824,103912..104067,104146..104305,104390..104520,104633..104709,104781..104904,105019..105159,105284..105443,105531..105655,105861..105931,106013..106192,106315..106396,106481..107140,107313..107394,107494..107633,107741..107889)	Acanthamoeba castellanii str. Neff	14923212
ACA1_251760	CDS	ACA1_251760	NW_004457618.1	108286	110197	D	encoded by transcript ACA1_251760A; protein kinase domain containing protein	join(108286..108405,108464..108650,108774..108855,109054..109193,109301..109407,109534..109657,109775..109837,109962..110197)	Acanthamoeba castellanii str. Neff	14923213
ACA1_251770	CDS	ACA1_251770	NW_004457618.1	111409	112556	D	encoded by transcript ACA1_251770A; uncharacterized protein	join(111409..111463,111545..111675,111759..112076,112176..112556)	Acanthamoeba castellanii str. Neff	14923214
ACA1_251780	CDS	ACA1_251780	NW_004457618.1	115901	117370	D	encoded by transcript ACA1_251780A; serpin (serine proteinase inhibitor) superfamily protein	join(115901..116131,116213..116418,116513..116798,116866..117077,117148..117370)	Acanthamoeba castellanii str. Neff	14923215
ACA1_251790	CDS	ACA1_251790	NW_004457618.1	118428	121215	R	encoded by transcript ACA1_251790A; cellulase (glycosyl hydrolase family 5) subfamily protein	complement(join(118428..118528,118621..118705,118781..118888,118988..119067,119140..119374,119482..119582,119666..119786,119869..119950,120037..120122,120192..120242,120378..120490,120581..120698,120770..120871,121150..121215))	Acanthamoeba castellanii str. Neff	14923216
ACA1_251800	CDS	ACA1_251800	NW_004457618.1	121466	123689	D	encoded by transcript ACA1_251800A; WD domain, Gbeta repeat-containing protein	join(121466..121613,121725..121906,122058..122196,122339..122422,122533..122657,122740..122962,123126..123253,123339..123489,123592..123689)	Acanthamoeba castellanii str. Neff	14923217
ACA1_251810	CDS	ACA1_251810	NW_004457618.1	123818	124184	R	encoded by transcript ACA1_251810A; zinc finger (C3HC4type RING finger) family protein	complement(join(123818..123980,124060..124184))	Acanthamoeba castellanii str. Neff	14923218
ACA1_251920	CDS	ACA1_251920	NW_004457618.1	125099	125505	R	encoded by transcript ACA1_251920A; uncharacterized protein	complement(join(125099..125199,125294..125378,125452..125505))	Acanthamoeba castellanii str. Neff	14923219
ACA1_252030	CDS	ACA1_252030	NW_004457618.1	126411	130887	D	encoded by transcript ACA1_252030A; nucleolar complex associated protein, putative	join(126411..126452,126595..126770,126845..126962,127265..127666,127777..127877,127968..128104,128197..128266,128418..128498,128575..128698,128789..128918,129025..129110,129207..129307,129400..129577,129691..129810,129889..129999,130130..130334,130413..130570,130660..130887)	Acanthamoeba castellanii str. Neff	14923220
ACA1_252040	CDS	ACA1_252040	NW_004457618.1	131008	131596	R	encoded by transcript ACA1_252040A; Maflike protein	complement(join(131008..131155,131231..131484,131564..131596))	Acanthamoeba castellanii str. Neff	14923221
ACA1_252050	CDS	ACA1_252050	NW_004457618.1	132043	132237	R	encoded by transcript ACA1_252050A; uncharacterized protein	complement(132043..>132237)	Acanthamoeba castellanii str. Neff	14923222
ACA1_252060	CDS	ACA1_252060	NW_004457618.1	132754	136449	D	encoded by transcript ACA1_252060A; glycosyl hydrolase domain containing protein	join(132754..132828,132889..132945,133034..133247,133432..133582,133661..133782,133872..133962,134867..134945,135022..135201,135358..135698,135784..135833,135948..136045,136143..136285,136350..136449)	Acanthamoeba castellanii str. Neff	14923223
ACA1_252170	CDS	ACA1_252170	NW_004457618.1	136553	138173	R	encoded by transcript ACA1_252170A; Ras subfamily protein	complement(join(136553..136699,136789..136887,136951..137079,137242..137334,137543..137864,137932..138173))	Acanthamoeba castellanii str. Neff	14923224
ACA1_252180	CDS	ACA1_252180	NW_004457618.1	138458	140298	D	encoded by transcript ACA1_252180A; leucine rich repeat domain containing protein	join(138458..138852,138972..139549,139615..139681,139748..139838,139927..140012,140072..140255,140266..140298)	Acanthamoeba castellanii str. Neff	14923225
ACA1_252190	CDS	ACA1_252190	NW_004457618.1	140822	141766	R	encoded by transcript ACA1_252190A; uncharacterized protein	complement(join(140822..141133,141224..141517,141590..141766))	Acanthamoeba castellanii str. Neff	14923226
ACA1_252200	CDS	ACA1_252200	NW_004457618.1	142217	143012	D	encoded by transcript ACA1_252200A; saposin, putative	join(142217..142514,142613..142883,142955..143012)	Acanthamoeba castellanii str. Neff	14923227
ACA1_252210	CDS	ACA1_252210	NW_004457618.1	143603	146873	D	encoded by transcript ACA1_252210A; nonreceptor tyrosine kinase, putative	join(143603..143683,143760..143876,144032..144155,144196..144415,144483..144673,144771..145140,145231..145823,145908..146037,146164..146231,146297..146383,146466..146564,146643..146713,146802..146873)	Acanthamoeba castellanii str. Neff	14923228
ACA1_252320	CDS	ACA1_252320	NW_004457618.1	149945	150801	R	encoded by transcript ACA1_252320A; oxidoreductase, short chain dehydrogenase/reductase superfamily protein	complement(join(149945..150199,150454..150677,150756..150801))	Acanthamoeba castellanii str. Neff	14923229
ACA1_252440	CDS	ACA1_252440	NW_004457618.1	151912	152853	R	encoded by transcript ACA1_252440A; carbohydrate esterase family 1 protein	complement(151912..152853)	Acanthamoeba castellanii str. Neff	14923231
ACA1_252450	CDS	ACA1_252450	NW_004457618.1	153454	154692	D	encoded by transcript ACA1_252450A; L1P family protein	join(153454..153620,153702..153800,153947..154080,154184..154387,154502..154692)	Acanthamoeba castellanii str. Neff	14923232
ACA1_252460	CDS	ACA1_252460	NW_004457618.1	154800	156882	R	encoded by transcript ACA1_252460A; isovaleryl Coenzyme A dehydrogenase	complement(join(154800..154945,155048..155307,155408..155529,155617..155684,155784..155905,156012..156158,156208..156364,156441..156492,156625..156882))	Acanthamoeba castellanii str. Neff	14923233
ACA1_252470	CDS	ACA1_252470	NW_004457618.1	157188	158546	D	encoded by transcript ACA1_252470A; pantothenate kinase	join(157188..157390,157463..157473,157484..157840,157924..158069,158144..158261,158347..158546)	Acanthamoeba castellanii str. Neff	14923234
ACA1_252480	CDS	ACA1_252480	NW_004457618.1	158601	159742	R	encoded by transcript ACA1_252480A; Emopamil binding protein	complement(join(158601..158881,158991..159106,159192..159258,159350..159453,159591..159742))	Acanthamoeba castellanii str. Neff	14923235
ACA1_252490	CDS	ACA1_252490	NW_004457618.1	160572	164092	R	encoded by transcript ACA1_252490A; protein kinase domain containing protein	complement(join(160572..160711,160758..161021,161108..161237,161343..161414,161486..161575,161674..161774,161915..162372,162465..162652,162854..162955,163105..163316,163417..163534,163690..163830,163982..164092))	Acanthamoeba castellanii str. Neff	14923236
ACA1_252500	CDS	ACA1_252500	NW_004457618.1	164669	164967	D	encoded by transcript ACA1_252500A; COMM domain containing protein 6, putative	join(164669..164854,164917..164967)	Acanthamoeba castellanii str. Neff	14923237
ACA1_252510	CDS	ACA1_252510	NW_004457618.1	165085	166416	R	encoded by transcript ACA1_252510A; MIT domain containing protein	complement(join(165085..165980,166129..166212,166287..166416))	Acanthamoeba castellanii str. Neff	14923238
ACA1_252520	CDS	ACA1_252520	NW_004457618.1	166668	170749	R	encoded by transcript ACA1_252520A; uncharacterized protein	complement(join(166668..166982,167063..169935,170026..170176,170429..170749))	Acanthamoeba castellanii str. Neff	14923239
ACA1_252530	CDS	ACA1_252530	NW_004457618.1	172157	175345	D	encoded by transcript ACA1_252530A; protein kinase domain containing protein	join(172157..172267,172357..172497,172595..172718,172834..172876,172980..173148,173260..173407,173485..173689,173811..174025,174125..174246,174326..174433,174498..174569,174667..174799,174874..175000,175113..175248,175340..175345)	Acanthamoeba castellanii str. Neff	14923240
ACA1_252540	CDS	ACA1_252540	NW_004457618.1	175578	177086	R	encoded by transcript ACA1_252540A; uncharacterized protein	complement(join(175578..175658,175722..175747,175868..176023,176106..176270,176390..176575,176654..177086))	Acanthamoeba castellanii str. Neff	14923241
ACA1_252550	CDS	ACA1_252550	NW_004457618.1	177205	180674	R	encoded by transcript ACA1_252550A; uncharacterized protein	complement(join(177205..177461,177583..177675,177749..177988,178066..178155,178276..178467,178560..178845,178945..179034,179101..179319,179465..179563,179652..179887,179963..180091,180153..180244,180511..180674))	Acanthamoeba castellanii str. Neff	14923242
ACA1_252560	CDS	ACA1_252560	NW_004457618.1	181612	182684	D	encoded by transcript ACA1_252560A; uncharacterized protein	join(181612..181722,181800..182684)	Acanthamoeba castellanii str. Neff	14923243
ACA1_252570	CDS	ACA1_252570	NW_004457618.1	183007	184538	D	encoded by transcript ACA1_252570A; CBS domain containing protein	join(183007..183159,183222..183313,183383..183489,183559..183686,183753..183832,183891..184026,184102..184221,184288..184361,184433..184538)	Acanthamoeba castellanii str. Neff	14923244
ACA1_252580	CDS	ACA1_252580	NW_004457618.1	184646	186317	D	encoded by transcript ACA1_252580A; Replication factor C protein	join(184646..184710,184801..184879,184942..185021,185102..185195,185269..185303,185508..185628,185738..185863,185939..186052,186141..186317)	Acanthamoeba castellanii str. Neff	14923245
ACA1_252590	CDS	ACA1_252590	NW_004457618.1	186457	187462	R	encoded by transcript ACA1_252590A; DNA repair system protein	complement(join(186457..186516,186627..186735,186822..186890,186960..187462))	Acanthamoeba castellanii str. Neff	14923246
ACA1_252600	CDS	ACA1_252600	NW_004457618.1	187603	188364	D	encoded by transcript ACA1_252600A; uncharacterized protein	join(187603..187719,187977..188080,188173..188284,188317..188364)	Acanthamoeba castellanii str. Neff	14923247
ACA1_252610	CDS	ACA1_252610	NW_004457618.1	188526	190505	R	encoded by transcript ACA1_252610A; ADPribosylglycohydrolase superfamily protein	complement(join(188526..188656,188735..188867,188967..189232,189316..189373,189501..189600,189719..189849,189948..190102,190199..190505))	Acanthamoeba castellanii str. Neff	14923248
ACA1_252620	CDS	ACA1_252620	NW_004457618.1	190967	194079	D	encoded by transcript ACA1_252620A; agarase, putative	join(190967..191027,191134..191155,191168..191289,191404..191717,191797..191957,192032..192156,192263..192486,192562..192766,192826..192930,193025..193131,193263..193526,193630..194079)	Acanthamoeba castellanii str. Neff	14923249
ACA1_252630	CDS	ACA1_252630	NW_004457618.1	195668	197651	R	encoded by transcript ACA1_252630A; uncharacterized protein	complement(join(195668..195720,195751..196087,196191..196315,196401..196523,196592..196598,197118..197651))	Acanthamoeba castellanii str. Neff	14923250
ACA1_252740	CDS	ACA1_252740	NW_004457618.1	198468	199355	R	encoded by transcript ACA1_252740A; uncharacterized protein	complement(join(198468..198538,198569..198905,198995..199119,199211..199355))	Acanthamoeba castellanii str. Neff	14923251
ACA1_252750	CDS	ACA1_252750	NW_004457618.1	201187	203088	D	encoded by transcript ACA1_252750A; helicase associated domain containing protein	join(201187..202591,202685..202761,202864..203088)	Acanthamoeba castellanii str. Neff	14923252
ACA1_252760	CDS	ACA1_252760	NW_004457618.1	203818	204195	D	encoded by transcript ACA1_252760A; uncharacterized protein	join(203818..203886,203953..204195)	Acanthamoeba castellanii str. Neff	14923253
ACA1_252770	CDS	ACA1_252770	NW_004457618.1	204922	207022	R	encoded by transcript ACA1_252770A; leu/ile/valbinding protein	complement(join(204922..205098,205182..205342,205435..205539,205622..205766,205863..205961,206051..206232,206326..206448,206540..206652,206754..207022))	Acanthamoeba castellanii str. Neff	14923254
ACA1_252780	CDS	ACA1_252780	NW_004457618.1	207310	209102	R	encoded by transcript ACA1_252780A; Sel1 repeatcontaining protein	complement(join(207310..207746,207764..208290,208540..209102))	Acanthamoeba castellanii str. Neff	14923255
ACA1_252800	CDS	ACA1_252800	NW_004457618.1	213276	220726	D	encoded by transcript ACA1_252800A; dual specificity phosphatase, catalytic domain containing protein	join(213276..213354,213475..213501,213595..213652,213755..213799,213903..214017,214125..214292,214382..214477,214562..214628,214705..214757,214833..214940,215029..215116,215292..215836,215958..216844,216943..217244,217317..218055,218133..218357,218448..218507,218525..218537,218659..219282,219350..219440,219526..220260,220347..220726)	Acanthamoeba castellanii str. Neff	14923257
ACA1_252810	CDS	ACA1_252810	NW_004457618.1	220826	222519	R	encoded by transcript ACA1_252810A; carrier superfamily protein	complement(join(220826..220964,221022..221077,221146..221238,221361..221521,221744..221836,221982..222022,222033..222081,222186..222299,222381..222519))	Acanthamoeba castellanii str. Neff	14923258
ACA1_252820	CDS	ACA1_252820	NW_004457618.1	222670	224516	R	encoded by transcript ACA1_252820A; uncharacterized protein	complement(join(222670..223601,223670..223750,223848..224336,224375..224516))	Acanthamoeba castellanii str. Neff	14923259
ACA1_252830	CDS	ACA1_252830	NW_004457618.1	225216	226588	R	encoded by transcript ACA1_252830A; Carbohydrate binding domain CBM49 domain containing protein	complement(join(225216..226429,226531..226588))	Acanthamoeba castellanii str. Neff	14923260
ACA1_252840	CDS	ACA1_252840	NW_004457618.1	227103	228639	R	encoded by transcript ACA1_252840A; uncharacterized protein	complement(join(227103..227159,227227..227345,227399..227440,227482..227536,227654..227787,227826..227905,228431..228639))	Acanthamoeba castellanii str. Neff	14923261
ACA1_252850	CDS	ACA1_252850	NW_004457618.1	228797	231129	D	encoded by transcript ACA1_252850A; A/Gspecific adenine glycosylase	join(228797..228904,228972..229040,229143..229196,229227..229396,229511..229592,229721..229953,230038..230191,230293..231129)	Acanthamoeba castellanii str. Neff	14923262
ACA1_252860	CDS	ACA1_252860	NW_004457618.1	231192	231734	R	encoded by transcript ACA1_252860A; uncharacterized protein	complement(231192..231734)	Acanthamoeba castellanii str. Neff	14923263
ACA1_252870	CDS	ACA1_252870	NW_004457618.1	231931	233595	R	encoded by transcript ACA1_252870A; RNA recognition motif domain containing protein	complement(join(231931..232114,232215..232270,232352..232441,232546..232725,232811..233239,233407..>233595))	Acanthamoeba castellanii str. Neff	14923264
ACA1_252880	CDS	ACA1_252880	NW_004457618.1	233749	237960	R	encoded by transcript ACA1_252880A; uncharacterized protein	complement(join(233749..233769,233865..233963,234087..234152,234244..234331,234449..234534,234617..234734,234822..234900,234991..235066,235146..235240,235253..235397,235632..235700,235795..235864,235960..236025,236289..236410,236489..236600,236671..236801,236861..236956,237255..237334,237436..237511,237591..237685,237698..237842,237931..237960))	Acanthamoeba castellanii str. Neff	14923265
ACA1_253090	CDS	ACA1_253090	NW_004457618.1	238445	239851	D	encoded by transcript ACA1_253090A; Ulp1 protease family, Cterminal catalytic domain containing protein	join(238445..238677,238752..238883,238999..239851)	Acanthamoeba castellanii str. Neff	14923266
ACA1_253100	CDS	ACA1_253100	NW_004457618.1	239986	242686	R	encoded by transcript ACA1_253100A; MORN repeatcontaining protein	complement(join(239986..240012,240119..240215,240305..240457,240569..240633,240704..240768,240863..240983,241127..241210,241344..241410,241539..241863,241936..242026,242131..242223,242412..242489,242585..242686))	Acanthamoeba castellanii str. Neff	14923267
ACA1_253110	CDS	ACA1_253110	NW_004457618.1	243013	244727	D	encoded by transcript ACA1_253110A; uncharacterized protein	join(243013..243139,243228..243361,243486..243535,243619..243679,243790..243905,243994..244087,244223..244300,244388..244487,244561..244727)	Acanthamoeba castellanii str. Neff	14923268
ACA1_253120	CDS	ACA1_253120	NW_004457618.1	244889	247776	R	encoded by transcript ACA1_253120A; acyloxyacyl hydrolase	complement(join(244889..245155,245236..245387,245493..245603,245680..245751,245851..245976,246074..246172,246255..246365,246455..246575,246705..246802,246891..247190,247279..247431,247596..247776))	Acanthamoeba castellanii str. Neff	14923269
ACA1_253130	CDS	ACA1_253130	NW_004457618.1	248174	249516	D	encoded by transcript ACA1_253130A; N-formylglutamate amidohydrolase	join(248174..248217,248341..248468,248625..248722,248837..249044,249139..249237,249344..249516)	Acanthamoeba castellanii str. Neff	14923270
ACA1_253140	CDS	ACA1_253140	NW_004457618.1	249591	250691	R	encoded by transcript ACA1_253140A; mitochondrial carrier protein Rim2p/Mrs12p, putative	complement(join(249591..250288,250382..250691))	Acanthamoeba castellanii str. Neff	14923271
ACA1_253150	CDS	ACA1_253150	NW_004457618.1	251310	252565	D	encoded by transcript ACA1_253150A; RAB8D, putative	join(251310..251370,251456..251528,251577..251665,251887..251952,252042..252136,252209..252298,252368..252565)	Acanthamoeba castellanii str. Neff	14923272
ACA1_253160	CDS	ACA1_253160	NW_004457618.1	253159	263690	D	encoded by transcript ACA1_253160A; leucine rich repeat domain containing protein	join(253159..253345,253429..253746,253812..253996,254077..254267,254352..254548,254629..254997,255088..255534,255627..255707,255801..256082,256311..256745,256855..257125,257214..257327,257415..257753,257925..258035,258119..258207,258278..258385,258473..258578,258667..258774,258868..259201,259306..259388,259468..259751,259837..259889,260001..260092,260190..260337,260437..260563,260825..260966,261043..261209,261344..261520,261615..261757,261869..261956,262059..262116,262135..262236,262317..262974,263076..263690)	Acanthamoeba castellanii str. Neff	14923273
ACA1_253170	CDS	ACA1_253170	NW_004457618.1	264276	266033	R	encoded by transcript ACA1_253170A; uncharacterized protein	complement(join(264276..264411,264534..264639,264762..264828,264969..265126,265258..265420,265551..265730,265890..266033))	Acanthamoeba castellanii str. Neff	14923274
ACA1_253180	CDS	ACA1_253180	NW_004457618.1	266831	267918	R	encoded by transcript ACA1_253180A; ARM repeat fold domain containing protein	complement(join(266831..266947,267033..267586,267654..267918))	Acanthamoeba castellanii str. Neff	14923275
ACA1_253190	CDS	ACA1_253190	NW_004457618.1	268130	269345	R	encoded by transcript ACA1_253190A; HMG (high mobility group) box domain containing protein	complement(join(268130..268225,268287..268397,268566..268739,268866..269054,269202..269345))	Acanthamoeba castellanii str. Neff	14923276
ACA1_253200	CDS	ACA1_253200	NW_004457618.1	270295	271272	D	encoded by transcript ACA1_253200A; uncharacterized protein	join(270295..271069,271214..271272)	Acanthamoeba castellanii str. Neff	14923277
ACA1_253310	CDS	ACA1_253310	NW_004457618.1	271360	271681	R	encoded by transcript ACA1_253310A; HMG (high mobility group) box domain containing protein	complement(join(271360..271455,271523..271681))	Acanthamoeba castellanii str. Neff	14923278
ACA1_253320	CDS	ACA1_253320	NW_004457618.1	271994	273787	D	encoded by transcript ACA1_253320A; uncharacterized protein	join(271994..272056,272164..272341,272468..272650,272718..272831,272951..273094,273207..273295,273363..273517,273637..273787)	Acanthamoeba castellanii str. Neff	14923279
ACA1_253330	CDS	ACA1_253330	NW_004457618.1	273887	275877	R	encoded by transcript ACA1_253330A; uncharacterized protein	complement(join(273887..274960,275022..275152,275307..275541,275672..275780,275858..275877))	Acanthamoeba castellanii str. Neff	14923280
ACA1_253340	CDS	ACA1_253340	NW_004457618.1	276562	277553	R	encoded by transcript ACA1_253340A; uncharacterized protein	complement(join(276562..276701,276838..276957,277042..277303,277437..277553))	Acanthamoeba castellanii str. Neff	14923281
ACA1_253350	CDS	ACA1_253350	NW_004457618.1	277869	283155	R	encoded by transcript ACA1_253350A; protein kinase domain containing protein	complement(join(277869..278971,279129..279473,279572..279778,279878..279991,280100..280211,280300..280355,280428..280503,280640..280816,280871..280978,281083..281231,281323..281468,281542..281732,281838..281991,282066..282109,282197..282325,282462..282639,282782..282861,282961..283155))	Acanthamoeba castellanii str. Neff	14923282
ACA1_253360	CDS	ACA1_253360	NW_004457618.1	284425	285730	D	encoded by transcript ACA1_253360A; tetrapyrrole methylase domain containing protein	join(284425..284541,284624..284669,284797..284886,284970..285101,285268..285419,285590..285730)	Acanthamoeba castellanii str. Neff	14923283
ACA1_253370	CDS	ACA1_253370	NW_004457618.1	286812	288065	D	encoded by transcript ACA1_253370A; homeobox domain containing protein	286812..288065	Acanthamoeba castellanii str. Neff	14923284
ACA1_253380	CDS	ACA1_253380	NW_004457618.1	288416	289279	D	encoded by transcript ACA1_253380A; EF hand domain containing protein	join(288416..288513,288613..288685,288806..288850,288923..289028,289096..289118,289250..289279)	Acanthamoeba castellanii str. Neff	14923285
ACA1_253390	CDS	ACA1_253390	NW_004457618.1	289440	291326	D	encoded by transcript ACA1_253390A; pentatricopeptide repeat domain/PPR repeatcontaining protein	join(289440..289509,289584..289621,289767..289821,289863..290462,290577..290660,290734..291326)	Acanthamoeba castellanii str. Neff	14923286
ACA1_253400	CDS	ACA1_253400	NW_004457618.1	291955	292725	R	encoded by transcript ACA1_253400A; uncharacterized protein	complement(291955..292725)	Acanthamoeba castellanii str. Neff	14923287
ACA1_253410	CDS	ACA1_253410	NW_004457618.1	293397	294108	D	encoded by transcript ACA1_253410A; uncharacterized protein	join(293397..293559,293652..293763,293847..294108)	Acanthamoeba castellanii str. Neff	14923288
ACA1_253430	CDS	ACA1_253430	NW_004457618.1	296561	300176	R	encoded by transcript ACA1_253430A; calponin domain containing protein	complement(join(296561..296810,296910..297038,297125..297264,297343..297646,297657..298102,298189..298502,298589..298684,298779..299223,299556..300176))	Acanthamoeba castellanii str. Neff	14923290
ACA1_253440	CDS	ACA1_253440	NW_004457618.1	300753	302307	D	encoded by transcript ACA1_253440A; uncharacterized protein	join(300753..301016,301096..301215,301328..301384,301502..301646,301766..301896,302053..302151,302239..302307)	Acanthamoeba castellanii str. Neff	14923291
ACA1_253450	CDS	ACA1_253450	NW_004457618.1	302635	308634	D	encoded by transcript ACA1_253450A; C2 domain containing protein	join(302635..302832,303066..303149,303248..303325,303419..303511,303619..303688,303794..303885,304060..304161,304243..304283,304374..304574,304700..304818,304897..304978,305071..305119,305226..305304,305370..305484,305550..305614,305725..305834,305934..306183,306335..306414,306459..306575,306728..306935,307013..307147,307290..307372,307452..307523,307647..307761,307847..307974,308077..308164,308264..308437,308522..308634)	Acanthamoeba castellanii str. Neff	14923292
ACA1_253460	CDS	ACA1_253460	NW_004457618.1	308701	309371	R	encoded by transcript ACA1_253460A; protein kinase	complement(join(308701..309128,309239..309371))	Acanthamoeba castellanii str. Neff	14923293
ACA1_253470	CDS	ACA1_253470	NW_004457618.1	309639	310595	R	encoded by transcript ACA1_253470A; uncharacterized protein	complement(join(309639..310001,310092..310262,310350..310595))	Acanthamoeba castellanii str. Neff	14923294
ACA1_253480	CDS	ACA1_253480	NW_004457618.1	311357	314130	R	encoded by transcript ACA1_253480A; FAD dependent oxidoreductase domain containing protein	complement(join(311357..311461,311558..311673,311784..311907,312016..312114,312244..312330,312421..312468,312511..312523,312606..312845,312946..313058,313170..313244,313350..313422,313517..313629,313711..313815,313890..313969,314043..314130))	Acanthamoeba castellanii str. Neff	14923295
ACA1_253490	CDS	ACA1_253490	NW_004457618.1	315228	315720	D	encoded by transcript ACA1_253490A; uncharacterized protein	join(<315228..315380,315440..315529,315604..315720)	Acanthamoeba castellanii str. Neff	14923296
ACA1_253500	CDS	ACA1_253500	NW_004457618.1	316095	317363	D	encoded by transcript ACA1_253500A; Carbohydrate binding domain CBM49 domain containing protein	316095..317363	Acanthamoeba castellanii str. Neff	14923297
ACA1_253510	CDS	ACA1_253510	NW_004457618.1	317547	318979	R	encoded by transcript ACA1_253510A; uncharacterized protein	complement(join(317547..317746,317833..317933,318050..318445,318666..318732,318798..318835,318903..318979))	Acanthamoeba castellanii str. Neff	14923298
ACA1_253620	CDS	ACA1_253620	NW_004457618.1	320761	321000	D	encoded by transcript ACA1_253620A; importin alpha, putative	<320761..321000	Acanthamoeba castellanii str. Neff	14923299
ACA1_253630	CDS	ACA1_253630	NW_004457618.1	321469	323602	D	encoded by transcript ACA1_253630A; uncharacterized protein	join(321469..321701,321788..321950,322354..322430,322575..323003,323272..323344,323453..323602)	Acanthamoeba castellanii str. Neff	14923300
ACA1_253640	CDS	ACA1_253640	NW_004457618.1	323679	325520	D	encoded by transcript ACA1_253640A; uncharacterized protein	323679..325520	Acanthamoeba castellanii str. Neff	14923301
ACA1_253650	CDS	ACA1_253650	NW_004457618.1	325741	326988	R	encoded by transcript ACA1_253650A; Carbohydrate binding domain CBM49 domain containing protein	complement(325741..326988)	Acanthamoeba castellanii str. Neff	14923302
ACA1_253660	CDS	ACA1_253660	NW_004457618.1	327327	329696	R	encoded by transcript ACA1_253660A; phosphatidylinositol glycan, class W, putative	complement(join(327327..327418,327516..327576,327742..327819,327937..328069,328147..328303,328358..328484,328588..328740,328863..328952,329109..329217,329320..329519,329604..329696))	Acanthamoeba castellanii str. Neff	14923303
ACA1_253670	CDS	ACA1_253670	NW_004457618.1	329803	330958	R	encoded by transcript ACA1_253670A; uncharacterized protein	complement(join(329803..330041,330181..330958))	Acanthamoeba castellanii str. Neff	14923304
ACA1_253680	CDS	ACA1_253680	NW_004457618.1	331313	332526	R	encoded by transcript ACA1_253680A; YEATS family protein	complement(join(331313..331542,331604..331808,331892..331980,332121..332526))	Acanthamoeba castellanii str. Neff	14923305
ACA1_253690	CDS	ACA1_253690	NW_004457618.1	333156	334124	D	encoded by transcript ACA1_253690A; TM2 domain containing protein	join(333156..333246,333317..333350,333479..333556,333645..333713,333856..333964,334056..334124)	Acanthamoeba castellanii str. Neff	14923306
ACA1_253700	CDS	ACA1_253700	NW_004457618.1	334412	336595	D	encoded by transcript ACA1_253700A; uncharacterized protein	join(334412..334788,334882..335087,335296..335402,335502..335634,335724..336146,336254..336315,336389..336595)	Acanthamoeba castellanii str. Neff	14923307
ACA1_253710	CDS	ACA1_253710	NW_004457618.1	337113	339160	D	encoded by transcript ACA1_253710A; uncharacterized protein	join(337113..337172,337404..337551,337654..337701,337813..337908,337994..338074,338138..338204,338266..338377,338438..338575,338642..338731,338801..338907,338968..339160)	Acanthamoeba castellanii str. Neff	14923308
ACA1_253720	CDS	ACA1_253720	NW_004457618.1	340656	342337	D	encoded by transcript ACA1_253720A; regulator of chromosome condensation, RCC1, putative	join(340656..340761,340988..341052,341135..341492,341565..341980,342095..342337)	Acanthamoeba castellanii str. Neff	14923309
ACA1_253730	CDS	ACA1_253730	NW_004457618.1	342777	343389	D	encoded by transcript ACA1_253730A; uncharacterized protein	join(342777..342883,343050..343389)	Acanthamoeba castellanii str. Neff	14923310
ACA1_253840	CDS	ACA1_253840	NW_004457618.1	344085	344651	D	encoded by transcript ACA1_253840A; uncharacterized protein	344085..344651	Acanthamoeba castellanii str. Neff	14923311
ACA1_253850	CDS	ACA1_253850	NW_004457618.1	345398	348663	D	encoded by transcript ACA1_253850A; uncharacterized protein	join(345398..346090,346169..346235,346342..346478,346529..346770,346850..347111,347198..347452,347511..347659,347740..347791,347914..348000,348096..348174,348266..348392,348480..348663)	Acanthamoeba castellanii str. Neff	14923312
ACA1_253960	CDS	ACA1_253960	NW_004457618.1	348896	350802	R	encoded by transcript ACA1_253960A; uncharacterized protein	complement(join(<348896..349093,349207..349337,349409..349520,349594..349793,349881..349970,350052..350143,350228..350285,350373..350408,350542..350802))	Acanthamoeba castellanii str. Neff	14923313
ACA1_253970	CDS	ACA1_253970	NW_004457618.1	350961	355829	R	encoded by transcript ACA1_253970A; EGFlike domain containing protein	complement(join(350961..351106,351248..351421,351527..351754,351857..351976,352066..352206,352301..352531,352609..352712,352786..352915,352997..353122,353223..353342,353414..353503,353630..353650,353739..353861,353956..354062,354221..354443,354530..354638,354692..354739,354793..354829,354865..354964,355055..355175,355259..355422,355811..355829))	Acanthamoeba castellanii str. Neff	14923314
ACA1_253980	CDS	ACA1_253980	NW_004457618.1	357196	357994	R	encoded by transcript ACA1_253980A; copia LTR rider, putative	complement(join(357196..357224,357475..357994))	Acanthamoeba castellanii str. Neff	14923315
ACA1_253990	CDS	ACA1_253990	NW_004457618.1	358812	359400	R	encoded by transcript ACA1_253990A; uncharacterized protein	complement(join(358812..359045,359197..359400))	Acanthamoeba castellanii str. Neff	14923316
ACA1_254000	CDS	ACA1_254000	NW_004457618.1	359920	360159	R	encoded by transcript ACA1_254000A; uncharacterized protein	complement(359920..360159)	Acanthamoeba castellanii str. Neff	14923317
ACA1_254010	CDS	ACA1_254010	NW_004457618.1	361537	362862	D	encoded by transcript ACA1_254010A; uncharacterized protein	361537..362862	Acanthamoeba castellanii str. Neff	14923318
ACA1_254020	CDS	ACA1_254020	NW_004457618.1	363123	365176	D	encoded by transcript ACA1_254020A; uncharacterized protein	join(363123..363335,363495..364092,364182..364244,364380..365176)	Acanthamoeba castellanii str. Neff	14923319
ACA1_254030	CDS	ACA1_254030	NW_004457618.1	365477	366657	R	encoded by transcript ACA1_254030A; uncharacterized protein	complement(join(365477..365563,365680..365828,365911..365965,366047..366253,366356..366496,366604..366657))	Acanthamoeba castellanii str. Neff	14923320
ACA1_254040	CDS	ACA1_254040	NW_004457618.1	366895	369146	R	encoded by transcript ACA1_254040A; RIO1 family protein	complement(join(366895..367240,368055..368108,368204..368395,368490..368578,368655..369146))	Acanthamoeba castellanii str. Neff	14923321
ACA1_254150	CDS	ACA1_254150	NW_004457618.1	369357	372351	D	encoded by transcript ACA1_254150A; uncharacterized protein	join(369357..370186,371982..372093,372208..372351)	Acanthamoeba castellanii str. Neff	14923322
ACA1_254260	CDS	ACA1_254260	NW_004457618.1	374533	375320	R	encoded by transcript ACA1_254260A; uncharacterized protein	complement(join(374533..374637,374997..375178,375275..375320))	Acanthamoeba castellanii str. Neff	14923323
ACA1_254270	CDS	ACA1_254270	NW_004457618.1	376044	378483	R	encoded by transcript ACA1_254270A; response regulator receiver domain containing protein	complement(join(376044..376369,376397..376496,376782..376823,376921..377076,377147..377254,377326..377543,377604..377691,377772..378000,378110..378483))	Acanthamoeba castellanii str. Neff	14923324
ACA1_254380	CDS	ACA1_254380	NW_004457618.1	378901	379368	R	encoded by transcript ACA1_254380A; uncharacterized protein	complement(378901..379368)	Acanthamoeba castellanii str. Neff	14923325
ACA1_254390	CDS	ACA1_254390	NW_004457618.1	379648	383315	R	encoded by transcript ACA1_254390A; uncharacterized protein	complement(join(379648..379943,380047..380236,380388..380530,380728..380854,380985..381061,381176..381234,381308..381395,381508..381723,381872..382026,382133..382250,382418..382688,382896..383054,383235..383315))	Acanthamoeba castellanii str. Neff	14923326
ACA1_254400	CDS	ACA1_254400	NW_004457618.1	383594	386928	D	encoded by transcript ACA1_254400A; golgi family protein, putative	join(383594..383630,383743..384029,384121..384463,384548..384632,384742..384799,384909..385102,385285..385385,385518..385609,385726..385789,385867..385963,386052..386148,386274..386567,386665..386928)	Acanthamoeba castellanii str. Neff	14923327
ACA1_254410	CDS	ACA1_254410	NW_004457618.1	387062	387981	D	encoded by transcript ACA1_254410A; EF hand domain containing protein	join(387062..387125,387280..387542,387555..387774,387896..387981)	Acanthamoeba castellanii str. Neff	14923328
ACA1_254420	CDS	ACA1_254420	NW_004457618.1	388092	390075	R	encoded by transcript ACA1_254420A; Dcp1 family decapping family protein	complement(join(388092..388175,388273..388734,388839..389486,389582..389707,389863..390075))	Acanthamoeba castellanii str. Neff	14923329
ACA1_254430	CDS	ACA1_254430	NW_004457618.1	390178	391504	D	encoded by transcript ACA1_254430A; Appr1-p processing enzyme family protein, putative	join(390178..390370,390580..390702,390782..390830,390959..391138,391228..391302,391414..391504)	Acanthamoeba castellanii str. Neff	14923330
ACA1_254440	CDS	ACA1_254440	NW_004457618.1	391594	393808	D	encoded by transcript ACA1_254440A; protein kinase domain containing protein	join(391594..392029,392161..392335,392467..392726,392981..393110,393217..393322,393427..393587,393682..393808)	Acanthamoeba castellanii str. Neff	14923331
ACA1_254450	CDS	ACA1_254450	NW_004457618.1	393879	394735	R	encoded by transcript ACA1_254450A; shortchain dehydrogenase/reductase SDR, putative	complement(join(393879..394505,394586..394735))	Acanthamoeba castellanii str. Neff	14923332
ACA1_254570	CDS	ACA1_254570	NW_004457618.1	397302	398163	R	encoded by transcript ACA1_254570A; uncharacterized protein	complement(join(397302..397346,397409..397561,397714..398163))	Acanthamoeba castellanii str. Neff	14923334
ACA1_254680	CDS	ACA1_254680	NW_004457618.1	399324	401537	R	encoded by transcript ACA1_254680A; glutathione reductase	complement(join(399324..399449,399521..399715,399806..399891,399965..400123,400214..400427,400554..400674,400744..400815,400896..400980,401047..401193,401263..401380,401490..401537))	Acanthamoeba castellanii str. Neff	14923335
ACA1_254690	CDS	ACA1_254690	NW_004457618.1	402253	403992	D	encoded by transcript ACA1_254690A; uncharacterized protein	402253..403992	Acanthamoeba castellanii str. Neff	14923336
ACA1_254700	CDS	ACA1_254700	NW_004457618.1	403995	406635	D	encoded by transcript ACA1_254700A; RhoGAP domain containing protein	join(403995..405557,405679..405754,405847..405928,406036..406201,406304..406428,406524..406635)	Acanthamoeba castellanii str. Neff	14923337
ACA1_254710	CDS	ACA1_254710	NW_004457618.1	406766	410140	D	encoded by transcript ACA1_254710A; leucine rich repeat domain containing protein	join(406766..406833,406915..407098,407234..407319,407398..407526,407607..407655,407759..407925,408025..409535,409683..410044,410123..410140)	Acanthamoeba castellanii str. Neff	14923338
ACA1_254720	CDS	ACA1_254720	NW_004457618.1	410628	411863	R	encoded by transcript ACA1_254720A; GDSL-lilke lipase/acylhydrolase family protein	complement(join(410628..411010,411141..411195,411358..411590,411746..>411863))	Acanthamoeba castellanii str. Neff	14923339
ACA1_254730	CDS	ACA1_254730	NW_004457618.1	412263	415962	R	encoded by transcript ACA1_254730A; cytochrome p450 superfamily protein	complement(join(412263..412430,412546..412719,412839..412940,413098..413163,413422..413619,413803..413938,414044..414168,414283..414442,414529..414574,414731..414825,414889..415131,415339..415437,415748..415962))	Acanthamoeba castellanii str. Neff	14923340
ACA1_254740	CDS	ACA1_254740	NW_004457618.1	416293	418762	R	encoded by transcript ACA1_254740A; actin subfamily protein	complement(join(416293..416409,416492..416622,416711..416737,417003..417121,417265..417352,417615..417755,417860..417923,418067..418217,418346..418392,418462..418637,418717..418762))	Acanthamoeba castellanii str. Neff	14923341
ACA1_254850	CDS	ACA1_254850	NW_004457618.1	419609	423523	D	encoded by transcript ACA1_254850A; trehalose synthase	join(419609..419614,419726..419892,420024..420071,420214..420288,420410..420506,420661..420765,420917..420975,421091..421229,421301..421365,421479..421579,421808..421982,422074..422227,422312..422407,422525..422653,422767..422898,422986..423265,423375..423523)	Acanthamoeba castellanii str. Neff	14923342
ACA1_254860	CDS	ACA1_254860	NW_004457618.1	423930	425515	D	encoded by transcript ACA1_254860A; phytanoylCoA dioxygenase	join(423930..424061,424328..424594,424678..424762,424863..424956,425055..425119,425245..425317,425431..425515)	Acanthamoeba castellanii str. Neff	14923343
ACA1_254870	CDS	ACA1_254870	NW_004457618.1	426343	428121	R	encoded by transcript ACA1_254870A; chitinase Chi60, putative	complement(join(426343..426488,426598..426685,426787..426935,427080..427169,427252..427436,427574..427713,427781..427867,428092..428121))	Acanthamoeba castellanii str. Neff	14923344
ACA1_254880	CDS	ACA1_254880	NW_004457618.1	428562	433565	R	encoded by transcript ACA1_254880A; Ankyrin repeatcontaining protein	complement(join(428562..428682,428799..428931,429018..429183,429307..429462,429605..429768,429907..430090,430189..430320,430341..430371,430385..430514,430709..431007,431151..431274,431368..431492,431616..431776,431942..433139,433297..433327,433448..433565))	Acanthamoeba castellanii str. Neff	14923345
ACA1_254890	CDS	ACA1_254890	NW_004457618.1	434052	442263	R	encoded by transcript ACA1_254890A; serine/threonine protein kinase, putative	complement(join(434052..434374,434459..434558,434655..434860,434956..435284,435376..435623,435724..435970,436047..436135,436241..436431,436765..436851,436929..436995,437107..437312,437441..437591,437729..437887,437970..438086,438161..438326,438471..438567,438692..438829,438954..439057,439143..439182,439286..439548,439654..439754,439926..440129,440268..440347,440457..440603,440740..440855,440901..441087,441196..441376,441500..441646,441757..441910,442017..442110,442209..442263))	Acanthamoeba castellanii str. Neff	14923346
ACA1_254900	CDS	ACA1_254900	NW_004457618.1	443570	445413	D	encoded by transcript ACA1_254900A; kinase, pfkB superfamily protein	join(443570..443630,443713..443940,444035..444964,445093..445202,445324..445413)	Acanthamoeba castellanii str. Neff	14923347
ACA1_254910	CDS	ACA1_254910	NW_004457618.1	445496	446084	R	encoded by transcript ACA1_254910A; uncharacterized protein	complement(join(445496..445774,445881..446084))	Acanthamoeba castellanii str. Neff	14923348
ACA1_254920	CDS	ACA1_254920	NW_004457618.1	446361	451934	D	encoded by transcript ACA1_254920A; von Willebrand factor type A domain containing protein	join(446361..446402,446458..446520,446710..446881,446969..447200,447265..447370,447469..447590,447726..447858,447945..447983,448000..448234,448435..448628,448735..448845,448955..449038,449116..449324,449431..449574,449698..449800,450160..450229,450327..450426,450532..450584,450701..450781,450904..451410,451541..451692,451821..451934)	Acanthamoeba castellanii str. Neff	14923349
ACA1_255030	CDS	ACA1_255030	NW_004457618.1	452330	454267	R	encoded by transcript ACA1_255030A; uncharacterized protein	complement(join(452330..452430,452665..453340,453364..453425,453528..453728,453823..454018,454172..454267))	Acanthamoeba castellanii str. Neff	14923350
ACA1_255140	CDS	ACA1_255140	NW_004457618.1	454923	455300	R	encoded by transcript ACA1_255140A; hypoxia induced protein region protein, putative	complement(454923..455300)	Acanthamoeba castellanii str. Neff	14923351
ACA1_255150	CDS	ACA1_255150	NW_004457618.1	455888	457010	D	encoded by transcript ACA1_255150A; uncharacterized protein	join(455888..455960,456157..456303,456454..456538,456637..456708,456830..457010)	Acanthamoeba castellanii str. Neff	14923352
ACA1_255160	CDS	ACA1_255160	NW_004457618.1	457166	457905	D	encoded by transcript ACA1_255160A; uncharacterized protein	join(457166..457304,457443..457555,457705..457905)	Acanthamoeba castellanii str. Neff	14923353
ACA1_255170	CDS	ACA1_255170	NW_004457618.1	458045	458825	R	encoded by transcript ACA1_255170A; uncharacterized protein	complement(join(458045..458523,458675..458825))	Acanthamoeba castellanii str. Neff	14923354
ACA1_255190	CDS	ACA1_255190	NW_004457618.1	460021	464102	R	encoded by transcript ACA1_255190A; kinesin motor domain containing protein	complement(join(460021..460136,460237..460951,461055..461126,461249..461350,461393..461533,461646..461794,461895..462006,462141..462293,462391..462457,462608..462785,462875..462980,463228..463351,463476..463652,463782..463823,463897..464102))	Acanthamoeba castellanii str. Neff	14923356
ACA1_255200	CDS	ACA1_255200	NW_004457618.1	464934	466963	R	encoded by transcript ACA1_255200A; uncharacterized protein	complement(join(464934..464982,465099..465183,465404..465517,465880..465958,466073..466218,466303..466373,466472..466509,466520..466963))	Acanthamoeba castellanii str. Neff	14923357
ACA1_255210	CDS	ACA1_255210	NW_004457618.1	467187	469054	D	encoded by transcript ACA1_255210A; isocitrate dehydrogenase LysB, putative	join(467187..467417,467604..467762,467829..468014,468089..468191,468255..468361,468446..468546,468675..468919,468981..469054)	Acanthamoeba castellanii str. Neff	14923358
ACA1_255220	CDS	ACA1_255220	NW_004457618.1	469392	470433	R	encoded by transcript ACA1_255220A; hydrolase, alpha/beta fold domain containing protein	complement(join(469392..469422,469529..469638,469763..469897,469972..470107,470228..470433))	Acanthamoeba castellanii str. Neff	14923359
ACA1_255230	CDS	ACA1_255230	NW_004457618.1	470644	471278	R	encoded by transcript ACA1_255230A; LSM Smlike protein family member, putative	complement(join(470644..470724,470922..471017,471144..471278))	Acanthamoeba castellanii str. Neff	14923360
ACA1_255240	CDS	ACA1_255240	NW_004457618.1	472247	473273	R	encoded by transcript ACA1_255240A; protein kinase domain containing protein	complement(join(472247..472722,472865..473273))	Acanthamoeba castellanii str. Neff	14923361
ACA1_255250	CDS	ACA1_255250	NW_004457618.1	474170	475923	R	encoded by transcript ACA1_255250A; F-box domain containing protein	complement(join(474170..475502,475697..475923))	Acanthamoeba castellanii str. Neff	14923362
ACA1_255360	CDS	ACA1_255360	NW_004457618.1	477882	479655	R	encoded by transcript ACA1_255360A; lin10, putative	complement(join(<477882..477986,478079..478183,478314..478483,478582..478829,478906..478960,479075..479323,479416..479522,479604..479655))	Acanthamoeba castellanii str. Neff	14923363
ACA1_255370	CDS	ACA1_255370	NW_004457618.1	479919	481504	R	encoded by transcript ACA1_255370A; CAAX prenyl protease 2, putative	complement(join(479919..480016,480136..480228,480308..480370,480475..480546,480630..480741,480808..480978,481055..481111,481295..481504))	Acanthamoeba castellanii str. Neff	14923364
ACA1_255380	CDS	ACA1_255380	NW_004457618.1	481617	483839	D	encoded by transcript ACA1_255380A; alphamethylacyl-CoA racemase, putative	join(481617..481806,481920..482014,482152..482224,482380..482504,482635..482782,482877..482932,483110..483309,483381..483592,483784..483839)	Acanthamoeba castellanii str. Neff	14923365
ACA1_255390	CDS	ACA1_255390	NW_004457618.1	484211	486051	D	encoded by transcript ACA1_255390A; uncharacterized protein	join(484211..484349,484437..484501,484677..484715,484834..484974,485118..485198,485274..485420,485498..485591,485659..485912,485983..486051)	Acanthamoeba castellanii str. Neff	14923366
ACA1_255400	CDS	ACA1_255400	NW_004457618.1	486120	487075	R	encoded by transcript ACA1_255400A; uncharacterized protein	complement(join(486120..486312,486480..486682,486744..486938,487004..487075))	Acanthamoeba castellanii str. Neff	14923367
ACA1_255410	CDS	ACA1_255410	NW_004457618.1	487614	494625	R	encoded by transcript ACA1_255410A; serine/threonine protein kinase, putative	complement(join(487614..487856,487934..488107,488193..488401,488478..488646,488744..489051,489130..489589,489782..489908,489681..489908,489997..490125,490204..490326,490386..490591,490663..490821,490896..491012,491101..491372,491436..491686,491783..491927,491996..492158,492227..492310,492419..492653,492683..492726,492792..492983,493195..493390,493464..493861,494084..494424,494544..494625))	Acanthamoeba castellanii str. Neff	14923368
ACA1_255420	CDS	ACA1_255420	NW_004457618.1	495011	496715	D	encoded by transcript ACA1_255420A; uncharacterized protein	join(495011..495732,495852..495952,496064..496221,496322..496475,496570..496715)	Acanthamoeba castellanii str. Neff	14923369
ACA1_255430	CDS	ACA1_255430	NW_004457618.1	496886	497761	R	encoded by transcript ACA1_255430A; transmembrane protein 97, putative	complement(join(496886..497015,497107..497215,497316..497420,497537..497620,497686..497761))	Acanthamoeba castellanii str. Neff	14923370
ACA1_255440	CDS	ACA1_255440	NW_004457618.1	498050	498780	D	encoded by transcript ACA1_255440A; uncharacterized protein	join(498050..498073,498106..498204,498370..498504,498598..498780)	Acanthamoeba castellanii str. Neff	14923371
ACA1_255450	CDS	ACA1_255450	NW_004457618.1	498948	501005	D	encoded by transcript ACA1_255450A; uncharacterized protein	join(498948..499091,499231..499354,499415..499513,499596..499711,499821..499966,500295..500402,500488..500684,500788..501005)	Acanthamoeba castellanii str. Neff	14923372
ACA1_255460	CDS	ACA1_255460	NW_004457618.1	504873	507664	R	encoded by transcript ACA1_255460A; Diacylglycerol acyltransferase protein	complement(join(504873..505546,505612..505924,506186..506243,506323..506399,506490..506629,506707..506815,506889..506936,507247..507347,507478..507664))	Acanthamoeba castellanii str. Neff	14923373
ACA1_255480	CDS	ACA1_255480	NW_004457618.1	509044	512320	D	encoded by transcript ACA1_255480A; nucleotidyltransferase domain containing protein	join(509044..509241,509343..509474,509485..509533,509593..509714,509807..509992,510111..510711,510790..510999,511082..511198,511308..511467,511606..511662,511743..511883,511968..512057,512161..512320)	Acanthamoeba castellanii str. Neff	14923375
ACA1_255490	CDS	ACA1_255490	NW_004457618.1	512606	515340	R	encoded by transcript ACA1_255490A; solute carrier family protein	complement(join(512606..512839,513002..513189,513308..513456,513555..513786,513873..513962,514037..514136,514250..514434,515085..515340))	Acanthamoeba castellanii str. Neff	14923376
ACA1_255500	CDS	ACA1_255500	NW_004457618.1	515443	517765	D	encoded by transcript ACA1_255500A; phytochelatin synthase	join(515443..515504,515741..515873,516004..516049,516073..516154,516278..516358,516491..516558,516650..516757,516873..517765)	Acanthamoeba castellanii str. Neff	14923377
ACA1_255510	CDS	ACA1_255510	NW_004457618.1	517898	520782	R	encoded by transcript ACA1_255510A; uncharacterized protein	complement(join(517898..518002,518080..518187,518281..518525,518606..518731,518852..519043,519131..519251,519359..519457,519529..519585,519711..519797,519924..520231,520331..520410,520498..520630,520707..520782))	Acanthamoeba castellanii str. Neff	14923378
ACA1_255530	CDS	ACA1_255530	NW_004457618.1	533955	535582	R	encoded by transcript ACA1_255530A; carrier superfamily protein	complement(join(533955..534087,534181..534405,534498..534584,534690..534754,534855..534979,535079..535138,535282..535582))	Acanthamoeba castellanii str. Neff	14923380
ACA1_255540	CDS	ACA1_255540	NW_004457618.1	536768	537404	D	encoded by transcript ACA1_255540A; uncharacterized protein	join(536768..537026,537091..537404)	Acanthamoeba castellanii str. Neff	14923381
ACA1_255550	CDS	ACA1_255550	NW_004457618.1	537940	539114	D	encoded by transcript ACA1_255550A; alpha-aminoadipate aminotransferase family protein	join(537940..538071,538180..538311,538410..538477,538643..538759,538865..539002,539102..539114)	Acanthamoeba castellanii str. Neff	14923382
ACA1_255660	CDS	ACA1_255660	NW_004457618.1	539499	539834	R	encoded by transcript ACA1_255660A; uncharacterized protein	complement(<539499..>539834)	Acanthamoeba castellanii str. Neff	14923383
ACA1_255670	CDS	ACA1_255670	NW_004457618.1	540755	543236	D	encoded by transcript ACA1_255670A; uncharacterized protein	join(540755..540886,540986..541117,541229..541296,541460..541576,541687..541816,541922..542071,542229..542316,542426..542490,542588..542689,542795..542882,543004..543236)	Acanthamoeba castellanii str. Neff	14923384
ACA1_255680	CDS	ACA1_255680	NW_004457618.1	543429	544697	R	encoded by transcript ACA1_255680A; protein kinase domain containing protein	complement(543429..544697)	Acanthamoeba castellanii str. Neff	14923385
ACA1_255690	CDS	ACA1_255690	NW_004457618.1	545791	546171	R	encoded by transcript ACA1_255690A; uncharacterized protein	complement(join(545791..545929,545996..546171))	Acanthamoeba castellanii str. Neff	14923386
ACA1_255700	CDS	ACA1_255700	NW_004457618.1	546386	546934	R	encoded by transcript ACA1_255700A; uncharacterized protein	complement(546386..546934)	Acanthamoeba castellanii str. Neff	14923387
ACA1_255710	CDS	ACA1_255710	NW_004457618.1	547183	549594	D	encoded by transcript ACA1_255710A; RhoGAP domain containing protein	join(547183..547250,547342..547428,547557..547719,547842..548007,548089..548148,548253..548585,548678..548892,548967..549049,549182..549330,549482..549594)	Acanthamoeba castellanii str. Neff	14923388
ACA1_255720	CDS	ACA1_255720	NW_004457618.1	549807	552747	D	encoded by transcript ACA1_255720A; eukaryotic aspartyl protease superfamily protein	join(549807..549830,549906..550155,550325..550545,550792..551010,551129..551218,551283..551457,551551..551683,551737..551892,552043..552158,552261..552283,552378..552487,552603..552747)	Acanthamoeba castellanii str. Neff	14923389
ACA1_255730	CDS	ACA1_255730	NW_004457618.1	553258	558027	R	encoded by transcript ACA1_255730A; hybrid signal transduction histidine kinase j, putative	complement(join(553258..554390,554535..554648,554764..554919,554999..555167,555230..556756,556884..557026,557139..557547,557650..558027))	Acanthamoeba castellanii str. Neff	14923390
ACA1_255740	CDS	ACA1_255740	NW_004457618.1	559329	559625	R	encoded by transcript ACA1_255740A; uncharacterized protein	complement(559329..559625)	Acanthamoeba castellanii str. Neff	14923391
ACA1_255750	CDS	ACA1_255750	NW_004457618.1	559808	563248	D	encoded by transcript ACA1_255750A; uncharacterized protein	join(559808..559883,559997..560191,560345..560406,560540..560587,560691..560812,560966..561071,561240..561351,561474..561617,561792..561918,562090..562221,562335..562502,562644..562737,562889..563041,563135..563248)	Acanthamoeba castellanii str. Neff	14923392
ACA1_255760	CDS	ACA1_255760	NW_004457618.1	563462	565014	D	encoded by transcript ACA1_255760A; acid phosphatase PHOa, putative	join(563462..563616,563727..563824,563935..564148,564312..564424,564588..564743,564857..565014)	Acanthamoeba castellanii str. Neff	14923393
ACA1_255770	CDS	ACA1_255770	NW_004457618.1	565860	571150	R	encoded by transcript ACA1_255770A; uncharacterized protein	complement(join(565860..565881,565938..566051,566198..566358,566530..566638,566782..566869,567063..567206,567425..567509,567707..567794,567985..568055,568140..568258,568446..568592,568754..568925,569022..569080,569172..569297,569658..569766,569853..569929,570121..570243,570254..570328,570359..570429,570588..570630,570803..570886,571072..571150))	Acanthamoeba castellanii str. Neff	14923394
ACA1_255880	CDS	ACA1_255880	NW_004457618.1	571698	572084	R	encoded by transcript ACA1_255880A; uncharacterized protein	complement(join(571698..571807,572006..572084))	Acanthamoeba castellanii str. Neff	14923395
ACA1_255890	CDS	ACA1_255890	NW_004457618.1	572370	575772	R	encoded by transcript ACA1_255890A; uncharacterized protein	complement(join(572370..572671,572783..572916,573166..573442,573483..573742,573892..573985,574132..574735,574836..575061,575265..575599,575629..575772))	Acanthamoeba castellanii str. Neff	14923396
ACA1_255900	CDS	ACA1_255900	NW_004457618.1	576530	579599	D	encoded by transcript ACA1_255900A; domain found in dishevelled, egl10, and pleckstrin domain containing protein	join(576530..576727,576885..576990,577199..577327,577501..577549,577671..577887,578005..578188,578308..578449,578531..578618,578756..578870,579042..579178,579285..579424,579533..579599)	Acanthamoeba castellanii str. Neff	14923397
ACA1_255910	CDS	ACA1_255910	NW_004457618.1	579671	582315	R	encoded by transcript ACA1_255910A; Histone-lysine N-methyltransferase	complement(join(579671..580572,580660..580776,581006..581136,581312..581427,581770..581959,582010..582022,582071..582122,582199..582315))	Acanthamoeba castellanii str. Neff	14923398
ACA1_256020	CDS	ACA1_256020	NW_004457618.1	583350	584389	R	encoded by transcript ACA1_256020A; uncharacterized protein	complement(join(583350..583360,583437..583534,583595..583797,583863..584111,584171..584247,584374..584389))	Acanthamoeba castellanii str. Neff	14923399
ACA1_256130	CDS	ACA1_256130	NW_004457618.1	587815	588003	R	encoded by transcript ACA1_256130A; uncharacterized protein	complement(<587815..588003)	Acanthamoeba castellanii str. Neff	14923400
ACA1_035240	CDS	ACA1_035240	NW_004457617.1	2372	3729	D	encoded by transcript ACA1_035240A; uncharacterized protein	join(2372..2591,2669..2860,2957..3133,3251..3729)	Acanthamoeba castellanii str. Neff	14923168
ACA1_035250	CDS	ACA1_035250	NW_004457617.1	4620	6155	R	encoded by transcript ACA1_035250A; uncharacterized protein	complement(join(4620..5539,5630..5783,5973..6155))	Acanthamoeba castellanii str. Neff	14923123
ACA1_035260	CDS	ACA1_035260	NW_004457617.1	6972	8717	R	encoded by transcript ACA1_035260A; Guanine nucleotidebinding protein G(o), alpha subunit, putative	complement(join(6972..7083,7301..7397,7471..7730,7813..7944,8036..8219,8435..8717))	Acanthamoeba castellanii str. Neff	14923124
ACA1_035270	CDS	ACA1_035270	NW_004457617.1	9064	10815	D	encoded by transcript ACA1_035270A; uncharacterized protein	join(9064..10602,10702..10815)	Acanthamoeba castellanii str. Neff	14923125
ACA1_035280	CDS	ACA1_035280	NW_004457617.1	10944	11723	R	encoded by transcript ACA1_035280A; uncharacterized protein	complement(join(10944..11029,11125..11293,11388..11723))	Acanthamoeba castellanii str. Neff	14923126
ACA1_035290	CDS	ACA1_035290	NW_004457617.1	11827	12231	R	encoded by transcript ACA1_035290A; uncharacterized protein	complement(join(11827..11923,11959..12037,12198..12231))	Acanthamoeba castellanii str. Neff	14923127
ACA1_035300	CDS	ACA1_035300	NW_004457617.1	12594	16356	D	encoded by transcript ACA1_035300A; glutaminase GtaA, putative	join(12594..12775,12879..12912,13032..13127,13205..13333,13428..13536,13635..13693,13851..13972,14125..14333,14430..14509,14578..14871,14960..15006,15094..15187,15297..15380,15478..15591,15641..15769,15943..16064,16131..16356)	Acanthamoeba castellanii str. Neff	14923128
ACA1_035310	CDS	ACA1_035310	NW_004457617.1	16534	19791	D	encoded by transcript ACA1_035310A; AMPbinding enzyme domain containing protein	join(16534..16638,16866..16976,17298..17353,17445..17527,17648..17774,17826..18003,18092..18171,18306..18421,18556..18702,18782..18879,18989..19168,19240..19335,19434..19584,19691..19791)	Acanthamoeba castellanii str. Neff	14923129
ACA1_035320	CDS	ACA1_035320	NW_004457617.1	20348	20623	D	encoded by transcript ACA1_035320A; uncharacterized protein	20348..20623	Acanthamoeba castellanii str. Neff	14923130
ACA1_035330	CDS	ACA1_035330	NW_004457617.1	20750	25279	R	encoded by transcript ACA1_035330A; helicase domain containing protein	complement(join(20750..20864,20948..21032,21113..21289,21394..21650,21757..21823,21910..21997,22062..22200,22276..22385,22551..22654,22749..22838,22920..23023,23103..23209,23317..23418,23579..23763,23774..23802,23837..23912,24407..24499,24592..24646,24757..24839,24979..25279))	Acanthamoeba castellanii str. Neff	14923131
ACA1_035340	CDS	ACA1_035340	NW_004457617.1	25842	28733	D	encoded by transcript ACA1_035340A; uncharacterized protein	join(25842..25945,26029..26155,26390..26533,26636..26804,26930..27096,27189..27347,27459..27554,27669..27800,27929..28234,28324..28424,28556..28733)	Acanthamoeba castellanii str. Neff	14923132
ACA1_035350	CDS	ACA1_035350	NW_004457617.1	28874	33543	R	encoded by transcript ACA1_035350A; protein kinase domain containing protein	complement(join(28874..29103,29203..29398,29542..29634,29749..29795,29873..29937,30070..30157,30326..30438,30519..31447,31517..31561,31673..32749,32840..32917,33019..33130,33248..33543))	Acanthamoeba castellanii str. Neff	14923133
ACA1_035360	CDS	ACA1_035360	NW_004457617.1	34295	34709	R	encoded by transcript ACA1_035360A; actin binding protein	complement(join(34295..34661,34681..34709))	Acanthamoeba castellanii str. Neff	14923134
ACA1_035370	CDS	ACA1_035370	NW_004457617.1	35402	37180	R	encoded by transcript ACA1_035370A; serine/threonine protein kinase	complement(join(35402..35516,35661..35785,35884..35973,36056..36175,36278..36427,36578..36712,36832..36903,37076..37180))	Acanthamoeba castellanii str. Neff	14923135
ACA1_035380	CDS	ACA1_035380	NW_004457617.1	37786	38498	R	encoded by transcript ACA1_035380A; peptidylprolyl isomerase H, putative	complement(join(37786..37989,38105..38309,38452..38498))	Acanthamoeba castellanii str. Neff	14923136
ACA1_035390	CDS	ACA1_035390	NW_004457617.1	38755	40168	D	encoded by transcript ACA1_035390A; uncharacterized protein	join(38755..38808,38951..40168)	Acanthamoeba castellanii str. Neff	14923137
ACA1_035400	CDS	ACA1_035400	NW_004457617.1	40345	41923	D	encoded by transcript ACA1_035400A; Fbox domain containing protein	join(40345..40671,40763..40880,40961..41141,41216..41264,41337..41461,41527..41610,41697..41805,41900..41923)	Acanthamoeba castellanii str. Neff	14923138
ACA1_035410	CDS	ACA1_035410	NW_004457617.1	42307	42954	R	encoded by transcript ACA1_035410A; uncharacterized protein	complement(42307..42954)	Acanthamoeba castellanii str. Neff	14923139
ACA1_035420	CDS	ACA1_035420	NW_004457617.1	43692	46846	R	encoded by transcript ACA1_035420A; carrier superfamily protein	complement(join(43692..43819,43928..44051,44152..44278,44424..44518,44607..44815,44950..45103,45196..45297,45407..45465,45576..45663,45778..45876,46045..46156,46286..46359,46487..46846))	Acanthamoeba castellanii str. Neff	14923140
ACA1_035430	CDS	ACA1_035430	NW_004457617.1	47153	47941	R	encoded by transcript ACA1_035430A; Smr domain containing protein	complement(join(47153..47239,47385..47475,47567..47647,47724..47795,47883..47941))	Acanthamoeba castellanii str. Neff	14923141
ACA1_035440	CDS	ACA1_035440	NW_004457617.1	47982	50818	R	encoded by transcript ACA1_035440A; CUE domain containing protein	complement(join(47982..47988,48048..48529,48638..48739,48895..50499,50624..50818))	Acanthamoeba castellanii str. Neff	14923142
ACA1_035450	CDS	ACA1_035450	NW_004457617.1	50981	52685	R	encoded by transcript ACA1_035450A; opposite strand transcription unit to Stag3, putative	complement(join(50981..51132,51215..51404,51513..51579,51648..51799,51898..51986,52094..52260,52290..52400,52558..52685))	Acanthamoeba castellanii str. Neff	14923143
ACA1_035460	CDS	ACA1_035460	NW_004457617.1	54142	56908	D	encoded by transcript ACA1_035460A; sugar (glycosidePentoside-hexuronide) transporter, putative	join(54142..54184,54292..54371,54598..54688,54798..54942,55055..55175,55292..55408,55556..55797,55950..56095,56223..56282,56379..56460,56560..56652,56728..56908)	Acanthamoeba castellanii str. Neff	14923144
ACA1_035470	CDS	ACA1_035470	NW_004457617.1	57347	61718	D	encoded by transcript ACA1_035470A; cation exchanger, putative	join(57347..57801,57940..58044,58170..58258,58408..58560,58674..58885,58943..58982,59065..59220,59290..59366,59461..59620,59707..59840,59978..60048,60131..60224,60305..60392,60468..60546,60626..60703,60840..60933,61041..61217,61310..61432,61521..61718)	Acanthamoeba castellanii str. Neff	14923145
ACA1_035480	CDS	ACA1_035480	NW_004457617.1	61981	63868	D	encoded by transcript ACA1_035480A; SET domain containing protein	join(61981..62056,62159..62202,62274..62385,62482..62640,62766..62782,62808..62871,62973..63167,63350..63511,63584..63714,63797..63868)	Acanthamoeba castellanii str. Neff	14923146
ACA1_035490	CDS	ACA1_035490	NW_004457617.1	63982	74971	R	encoded by transcript ACA1_035490A; tetratricopeptide repeat domain containing protein	complement(join(63982..64869,65009..65089,65239..65424,65519..65982,66090..66225,66379..66532,66644..66846,66955..67022,67172..67387,67450..67789,67855..68133,68186..68402,68523..68696,68773..68938,69092..69227,69362..69521,69629..69951,70072..70149,70253..70424,70513..70626,70725..70846,70951..71070,71162..71297,71433..71662,71779..72069,72163..72391,72470..72612,72720..72824,72911..72985,73069..73115,73180..73339,73440..73573,73727..73853,73971..74680,74827..74971))	Acanthamoeba castellanii str. Neff	14923147
ACA1_035500	CDS	ACA1_035500	NW_004457617.1	77490	77807	D	encoded by transcript ACA1_035500A; uncharacterized protein	join(77490..77539,77666..77807)	Acanthamoeba castellanii str. Neff	14923148
ACA1_035510	CDS	ACA1_035510	NW_004457617.1	78136	78696	R	encoded by transcript ACA1_035510A; uncharacterized protein	complement(78136..78696)	Acanthamoeba castellanii str. Neff	14923149
ACA1_035520	CDS	ACA1_035520	NW_004457617.1	79047	80629	R	encoded by transcript ACA1_035520A; SterolC5-desaturase	complement(join(79047..79128,79213..79305,79404..79491,79627..79781,79890..79990,80166..80288,80417..80629))	Acanthamoeba castellanii str. Neff	14923150
ACA1_035530	CDS	ACA1_035530	NW_004457617.1	81113	83274	R	encoded by transcript ACA1_035530A; oxidoreductase domain containing protein	complement(join(81113..81190,81255..81452,81565..81641,81716..81961,82052..82165,82297..82383,82473..82559,82630..82691,82773..82828,82927..83055,83161..83274))	Acanthamoeba castellanii str. Neff	14923151
ACA1_035540	CDS	ACA1_035540	NW_004457617.1	83468	84148	R	encoded by transcript ACA1_035540A; uncharacterized protein	complement(join(83468..83659,83828..84148))	Acanthamoeba castellanii str. Neff	14923152
ACA1_035550	CDS	ACA1_035550	NW_004457617.1	84438	87446	R	encoded by transcript ACA1_035550A; LIM domain containing protein	complement(join(84438..84580,84707..84922,85014..85172,85251..85349,85453..85605,85689..85795,85921..86014,86151..86301,86441..86581,86703..86855,86950..87179,87260..87446))	Acanthamoeba castellanii str. Neff	14923153
ACA1_035560	CDS	ACA1_035560	NW_004457617.1	87957	90834	R	encoded by transcript ACA1_035560A; short chain dehydrogenase/reductase family oxidoreductase	complement(join(87957..88134,88235..88360,88455..88600,88687..88757,88838..89206,89273..89316,89400..89634,89712..89864,89945..90049,90118..90235,90303..90432,90529..90576,90659..90834))	Acanthamoeba castellanii str. Neff	14923154
ACA1_035570	CDS	ACA1_035570	NW_004457617.1	90983	93379	R	encoded by transcript ACA1_035570A; RNAbinding protein, putative	complement(join(90983..91544,91629..91798,91877..92227,92360..92560,92963..93140,93240..93379))	Acanthamoeba castellanii str. Neff	14923155
ACA1_035580	CDS	ACA1_035580	NW_004457617.1	93681	93930	D	encoded by transcript ACA1_035580A; uncharacterized protein	join(93681..93699,93770..93930)	Acanthamoeba castellanii str. Neff	14923156
ACA1_035590	CDS	ACA1_035590	NW_004457617.1	94105	97014	R	encoded by transcript ACA1_035590A; ankyrin repeat and zinc finger domain protein, putative	complement(join(94105..94723,94853..95022,95121..95242,95326..95507,95607..95776,95894..96037,96140..96265,96354..96480,96587..97014))	Acanthamoeba castellanii str. Neff	14923157
ACA1_035600	CDS	ACA1_035600	NW_004457617.1	97473	97869	D	encoded by transcript ACA1_035600A; cupin domain containing protein	join(97473..97530,97599..97717,97792..97869)	Acanthamoeba castellanii str. Neff	14923158
ACA1_035610	CDS	ACA1_035610	NW_004457617.1	98235	98782	D	encoded by transcript ACA1_035610A; uncharacterized protein	join(98235..98516,98666..98782)	Acanthamoeba castellanii str. Neff	14923159
ACA1_035620	CDS	ACA1_035620	NW_004457617.1	99382	99915	D	encoded by transcript ACA1_035620A; uncharacterized protein	99382..99915	Acanthamoeba castellanii str. Neff	14923160
ACA1_035630	CDS	ACA1_035630	NW_004457617.1	100162	101148	D	encoded by transcript ACA1_035630A; endoplasmic reticulum protein	join(100162..100226,100300..100501,100605..100721,100822..100882,100994..101148)	Acanthamoeba castellanii str. Neff	14923161
ACA1_035640	CDS	ACA1_035640	NW_004457617.1	101232	103843	R	encoded by transcript ACA1_035640A; betalactamase	complement(join(101232..101470,101554..101627,101696..101858,101973..102171,102201..102338,102417..102553,102619..102748,102825..102936,103009..103091,103163..103277,103357..103520,103628..103843))	Acanthamoeba castellanii str. Neff	14923162
ACA1_035650	CDS	ACA1_035650	NW_004457617.1	104546	105846	D	encoded by transcript ACA1_035650A; SAM domain (Sterile alpha motif) domain containing protein	join(104546..105082,105355..105846)	Acanthamoeba castellanii str. Neff	14923163
ACA1_035660	CDS	ACA1_035660	NW_004457617.1	106552	107995	D	encoded by transcript ACA1_035660A; uncharacterized protein	join(106552..106854,107020..107091,107201..107252,107365..107502,107592..107995)	Acanthamoeba castellanii str. Neff	14923164
ACA1_035770	CDS	ACA1_035770	NW_004457617.1	108345	108712	R	encoded by transcript ACA1_035770A; uncharacterized protein	complement(join(108345..108426,108594..108712))	Acanthamoeba castellanii str. Neff	14923165
ACA1_035780	CDS	ACA1_035780	NW_004457617.1	108740	110498	R	encoded by transcript ACA1_035780A; uncharacterized protein	complement(join(108740..108884,108997..109144,109222..109356,109465..109586,109673..109774,109870..110006,110102..110169,110426..110498))	Acanthamoeba castellanii str. Neff	14923166
ACA1_035790	CDS	ACA1_035790	NW_004457617.1	115637	115926	D	encoded by transcript ACA1_035790A; uncharacterized protein	join(115637..115705,115798..>115926)	Acanthamoeba castellanii str. Neff	14923167
ACA1_125930	CDS	ACA1_125930	NW_004457616.1	103	886	R	encoded by transcript ACA1_125930A; uncharacterized protein	complement(join(<103..237,308..684,772..886))	Acanthamoeba castellanii str. Neff	14923122
ACA1_125940	CDS	ACA1_125940	NW_004457616.1	1290	5594	R	encoded by transcript ACA1_125940A; Phosphatidylinositol-4-phosphate 5-Kinase	complement(join(1290..1348,1448..1475,1507..1630,1725..1781,1876..1961,2048..2129,2192..2244,2346..2492,2632..2704,2778..2851,2943..3125,3196..3262,3350..3408,3505..3623,3700..3965,4067..4147,4232..4290,4386..4492,4566..4646,4751..4837,4937..5049,5147..5354,5480..5594))	Acanthamoeba castellanii str. Neff	14923102
ACA1_125950	CDS	ACA1_125950	NW_004457616.1	5812	7662	D	encoded by transcript ACA1_125950A; uncharacterized protein	join(5812..5853,5976..6024,6099..6206,6423..6570,6727..6813,6953..7001,7252..7315,7418..7440,7558..7662)	Acanthamoeba castellanii str. Neff	14923101
ACA1_125960	CDS	ACA1_125960	NW_004457616.1	7741	8504	R	encoded by transcript ACA1_125960A; EGFlike domain containing protein	complement(join(7741..7929,8044..8291,8495..8504))	Acanthamoeba castellanii str. Neff	14923091
ACA1_125970	CDS	ACA1_125970	NW_004457616.1	8840	10129	R	encoded by transcript ACA1_125970A; SH3 domain containing protein	complement(join(8840..8973,9093..9425,9747..9800,9889..10129))	Acanthamoeba castellanii str. Neff	14923092
ACA1_125980	CDS	ACA1_125980	NW_004457616.1	10555	14052	R	encoded by transcript ACA1_125980A; ATPdependent RNA helicase DHX8, putative	complement(10555..14052)	Acanthamoeba castellanii str. Neff	14923093
ACA1_125990	CDS	ACA1_125990	NW_004457616.1	15727	18750	R	encoded by transcript ACA1_125990A; uncharacterized protein	complement(join(15727..15782,15892..15980,16067..16153,16256..16319,16535..16630,16711..16902,17001..18750))	Acanthamoeba castellanii str. Neff	14923094
ACA1_126000	CDS	ACA1_126000	NW_004457616.1	19213	19425	D	encoded by transcript ACA1_126000A; uncharacterized protein	join(19213..19217,19236..19425)	Acanthamoeba castellanii str. Neff	14923095
ACA1_126010	CDS	ACA1_126010	NW_004457616.1	20229	20588	R	encoded by transcript ACA1_126010A; retroelement pol polyprotein	complement(20229..20588)	Acanthamoeba castellanii str. Neff	14923096
ACA1_126020	CDS	ACA1_126020	NW_004457616.1	20956	22301	R	encoded by transcript ACA1_126020A; uncharacterized protein	complement(join(20956..21151,21585..21739,21786..21998,22092..22301))	Acanthamoeba castellanii str. Neff	14923097
ACA1_126030	CDS	ACA1_126030	NW_004457616.1	23335	27357	R	encoded by transcript ACA1_126030A; CD36 family protein	complement(join(23335..23416,23499..23625,23711..23878,23968..24129,24217..24293,24366..24422,24516..24596,24681..24813,24899..24966,25053..25159,25240..25254,25325..25386,25474..25540,25626..25765,25836..25927,26128..26211,26301..26449,26537..26661,26735..26871,26948..27099,27205..27264,27310..27357))	Acanthamoeba castellanii str. Neff	14923098
ACA1_126140	CDS	ACA1_126140	NW_004457616.1	28291	30726	R	encoded by transcript ACA1_126140A; helicase associated domain containing protein	complement(join(28291..28347,28359..28839,28908..29030,29104..30481,30603..30726))	Acanthamoeba castellanii str. Neff	14923099
ACA1_126150	CDS	ACA1_126150	NW_004457616.1	31164	32303	D	encoded by transcript ACA1_126150A; uncharacterized protein	join(31164..31366,31677..31705,31806..31843,31946..32019,32114..32303)	Acanthamoeba castellanii str. Neff	14923100
ACA1_126170	CDS	ACA1_126170	NW_004457616.1	36549	44207	D	encoded by transcript ACA1_126170A; BTB/POZ domain containing protein	join(36549..36683,36729..36789,36877..36990,37144..37616,37745..37804,37850..37899,38145..38173,38253..38358,38428..38536,38600..38665,38720..38756,38862..39021,39071..39148,39270..39379,39594..39677,39773..40823,40887..40986,41060..41176,41395..41463,41577..41865,41956..42056,42134..42260,42337..42377,42466..42555,42639..42720,42976..44207)	Acanthamoeba castellanii str. Neff	14923104
ACA1_126180	CDS	ACA1_126180	NW_004457616.1	44672	49191	D	encoded by transcript ACA1_126180A; BTB/POZ domain containing protein	join(44672..44787,44984..45009,45108..45216,45308..45410,45524..45641,45730..45759,45855..45972,46051..46167,46238..46402,46475..47512,47586..47685,47794..47910,48023..48089,48157..48239,48307..48523,48692..49191)	Acanthamoeba castellanii str. Neff	14923105
ACA1_126290	CDS	ACA1_126290	NW_004457616.1	50462	52775	D	encoded by transcript ACA1_126290A; uncharacterized protein	join(50462..50517,51107..51233,51345..52775)	Acanthamoeba castellanii str. Neff	14923106
ACA1_126310	CDS	ACA1_126310	NW_004457616.1	58299	63416	D	encoded by transcript ACA1_126310A; ankyrin repeat-containing protein	join(58299..58774,58876..59227,59313..59425,59508..59591,59679..59867,59926..60114,60203..60299,60430..60690,60802..60930,61038..61079,61129..61222,61377..61530,61606..61695,61771..61873,62035..62136,62226..62376,62451..62681,62766..62904,63023..63416)	Acanthamoeba castellanii str. Neff	14923108
ACA1_126320	CDS	ACA1_126320	NW_004457616.1	63613	64463	R	encoded by transcript ACA1_126320A; SCPlike extracellular subfamily protein	complement(join(63613..63791,63875..63940,64062..64195,64273..64463))	Acanthamoeba castellanii str. Neff	14923109
ACA1_126330	CDS	ACA1_126330	NW_004457616.1	64684	67624	R	encoded by transcript ACA1_126330A; FYVE zinc finger domain containing protein	complement(join(64684..64975,65058..65169,65232..65317,65460..66363,66466..67363,67604..67624))	Acanthamoeba castellanii str. Neff	14923110
ACA1_126440	CDS	ACA1_126440	NW_004457616.1	68801	69744	R	encoded by transcript ACA1_126440A; glutaredoxin, putative	complement(join(68801..68936,69038..69104,69191..69554,69736..69744))	Acanthamoeba castellanii str. Neff	14923111
ACA1_126450	CDS	ACA1_126450	NW_004457616.1	70224	70561	D	encoded by transcript ACA1_126450A; uncharacterized protein	join(70224..70329,70365..70561)	Acanthamoeba castellanii str. Neff	14923112
ACA1_126460	CDS	ACA1_126460	NW_004457616.1	71362	73120	D	encoded by transcript ACA1_126460A; uncharacterized protein	join(71362..71504,71613..71743,71809..71879,71975..72077,72166..72281,72362..72453,72527..72672,72752..72921,73049..73120)	Acanthamoeba castellanii str. Neff	14923113
ACA1_126570	CDS	ACA1_126570	NW_004457616.1	73759	76104	D	encoded by transcript ACA1_126570A; elongation factor Tu GTP binding domain containing protein	join(73759..74037,74076..74267,74392..74581,74686..74807,74893..74988,75078..75213,75318..75553,75786..75894,75974..76104)	Acanthamoeba castellanii str. Neff	14923114
ACA1_126680	CDS	ACA1_126680	NW_004457616.1	76480	77407	D	encoded by transcript ACA1_126680A; Ras family protein	join(76480..76537,76651..76811,76894..77073,77144..77407)	Acanthamoeba castellanii str. Neff	14923115
ACA1_126690	CDS	ACA1_126690	NW_004457616.1	77793	80443	R	encoded by transcript ACA1_126690A; Phosphatidylinositol4-phosphate Kinase	complement(join(77793..77867,78133..78228,78303..78542,78629..78743,78872..78915,79008..79090,79168..79332,79451..79514,79586..79643,79801..79880,80003..80443))	Acanthamoeba castellanii str. Neff	14923116
ACA1_126700	CDS	ACA1_126700	NW_004457616.1	80673	81403	D	encoded by transcript ACA1_126700A; TRM112 family protein	join(80673..80852,80950..81036,81302..81403)	Acanthamoeba castellanii str. Neff	14923117
ACA1_126710	CDS	ACA1_126710	NW_004457616.1	82581	83586	D	encoded by transcript ACA1_126710A; HAD family hydrolase	join(82581..82772,82870..83010,83131..83262,83368..83586)	Acanthamoeba castellanii str. Neff	14923118
ACA1_126720	CDS	ACA1_126720	NW_004457616.1	83829	85370	R	encoded by transcript ACA1_126720A; diacylglycerol oacyltransferase	complement(join(83829..84166,84262..84432,84499..84627,84724..84844,84916..85076,85232..85370))	Acanthamoeba castellanii str. Neff	14923119
ACA1_126730	CDS	ACA1_126730	NW_004457616.1	85489	86661	D	encoded by transcript ACA1_126730A; uncharacterized protein	85489..86661	Acanthamoeba castellanii str. Neff	14923120
ACA1_126740	CDS	ACA1_126740	NW_004457616.1	86853	89272	R	encoded by transcript ACA1_126740A; uncharacterized protein	complement(join(86853..87007,87085..87386,87511..87760,87860..87970,88037..88147,88242..88344,88428..88537,88674..88949,89116..89272))	Acanthamoeba castellanii str. Neff	14923121
ACA1_303010	CDS	ACA1_303010	NW_004457614.1	7111	7706	D	encoded by transcript ACA1_303010A; ribonuclease z, putative	join(7111..7243,7440..7529,7588..>7706)	Acanthamoeba castellanii str. Neff	14923090
ACA1_303120	CDS	ACA1_303120	NW_004457614.1	13978	14537	R	encoded by transcript ACA1_303120A; uncharacterized protein	complement(join(13978..14027,14129..14407,14504..14537))	Acanthamoeba castellanii str. Neff	14923089
ACA1_321900	CDS	ACA1_321900	NW_004457613.1	376	5216	R	encoded by transcript ACA1_321900A; protein kinase domain containing protein	complement(join(376..743,826..973,1040..1658,1910..2418,2508..2575,2667..2733,2799..2906,3039..5216))	Acanthamoeba castellanii str. Neff	14923084
ACA1_321910	CDS	ACA1_321910	NW_004457613.1	6010	11561	R	encoded by transcript ACA1_321910A; uncharacterized protein	complement(join(6010..6245,6335..6451,6614..6716,6788..7121,7318..7648,7763..7880,7924..8098,8172..8251,8349..8494,8585..8774,8892..9125,9219..9369,9485..9602,9676..9808,9939..10059,10128..10324,10456..10612,10710..10857,10900..11302,11454..11561))	Acanthamoeba castellanii str. Neff	14923086
ACA1_321920	CDS	ACA1_321920	NW_004457613.1	12348	16060	D	encoded by transcript ACA1_321920A; Glycerol phosphate dehydrogenase 2, mitochondrial, putative	join(12348..12521,12643..12834,12937..13071,13342..13488,13552..13621,13707..13807,13887..14021,14044..14112,14148..14210,14295..14391,14624..14778,14845..14921,15099..15177,15251..15375,15456..15548,15620..15695,15784..15879,15959..16060)	Acanthamoeba castellanii str. Neff	14923087
ACA1_321930	CDS	ACA1_321930	NW_004457613.1	16841	18121	D	encoded by transcript ACA1_321930A; transporter, major intrinsic protein (MIP) superfamily protein	join(16841..17195,17325..17621,17708..17839,17946..18121)	Acanthamoeba castellanii str. Neff	14923088
ACA1_321940	CDS	ACA1_321940	NW_004457613.1	18228	18806	R	encoded by transcript ACA1_321940A; uncharacterized protein	complement(join(18228..18358,18453..18526,18598..18806))	Acanthamoeba castellanii str. Neff	14923085
ACA1_321950	CDS	ACA1_321950	NW_004457613.1	19257	21023	D	encoded by transcript ACA1_321950A; tyrosine/serine phosphatase, putative	join(19257..19408,19640..19801,19888..20075,20137..20258,20348..20580,20669..21023)	Acanthamoeba castellanii str. Neff	14923080
ACA1_321960	CDS	ACA1_321960	NW_004457613.1	21133	23505	D	encoded by transcript ACA1_321960A; aspartyl/glutamyltRNA(Asn/Gln) amidotransferase, A subunit	join(21133..21457,21565..21634,21766..21855,21930..22064,22145..22320,22388..22497,22568..22760,22847..22961,23059..23255,23339..23505)	Acanthamoeba castellanii str. Neff	14923081
ACA1_321970	CDS	ACA1_321970	NW_004457613.1	23872	25918	D	encoded by transcript ACA1_321970A; glutamate decarboxylase	join(23872..24018,24105..24278,24367..24484,24567..24674,24737..24953,25015..25318,25427..25918)	Acanthamoeba castellanii str. Neff	14923082
ACA1_321980	CDS	ACA1_321980	NW_004457613.1	25946	28276	R	encoded by transcript ACA1_321980A; Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase	complement(join(25946..25984,26051..26173,26251..27019,27104..27174,27244..27362,27420..27519,27623..27757,27816..27861,27970..28062,28188..>28276))	Acanthamoeba castellanii str. Neff	14923083
ACA1_157180	CDS	ACA1_157180	NW_004457611.1	696	975	D	encoded by transcript ACA1_157180A; uncharacterized protein	join(696..772,843..975)	Acanthamoeba castellanii str. Neff	14923079
ACA1_157190	CDS	ACA1_157190	NW_004457611.1	1013	1798	R	encoded by transcript ACA1_157190A; uncharacterized protein	complement(join(1013..1149,1207..1287,1304..1588,1600..1798))	Acanthamoeba castellanii str. Neff	14922917
ACA1_157200	CDS	ACA1_157200	NW_004457611.1	2028	3719	R	encoded by transcript ACA1_157200A; zinc transporter ZupT, putative	complement(join(2028..2122,2207..2286,2369..2458,2562..2649,2704..2822,2998..3130,3428..3719))	Acanthamoeba castellanii str. Neff	14922918
ACA1_157210	CDS	ACA1_157210	NW_004457611.1	4512	7274	D	encoded by transcript ACA1_157210A; uncharacterized protein	join(4512..4766,4947..5048,5240..5314,5469..5627,5753..5875,6000..6088,6189..6326,6436..6544,6678..6947,7059..7274)	Acanthamoeba castellanii str. Neff	14922919
ACA1_157220	CDS	ACA1_157220	NW_004457611.1	11129	14251	D	encoded by transcript ACA1_157220A; Prokumamolisin, activation domain containing protein	join(11129..11347,11596..11626,11718..11786,11882..11980,12095..12166,12275..12450,12557..12648,12728..12783,12874..13004,13115..13259,13356..13427,13504..13691,13784..13920,14170..14251)	Acanthamoeba castellanii str. Neff	14922920
ACA1_157230	CDS	ACA1_157230	NW_004457611.1	15049	15480	D	encoded by transcript ACA1_157230A; uncharacterized protein	join(15049..15291,15307..15480)	Acanthamoeba castellanii str. Neff	14922921
ACA1_157240	CDS	ACA1_157240	NW_004457611.1	15525	17266	R	encoded by transcript ACA1_157240A; uncharacterized protein	complement(join(15525..15639,15715..15793,15863..15979,16043..16163,16266..16356,16442..16526,16735..16794,16881..16991,17098..17266))	Acanthamoeba castellanii str. Neff	14922922
ACA1_157250	CDS	ACA1_157250	NW_004457611.1	18033	22495	D	encoded by transcript ACA1_157250A; tRNA pseudouridine synthase D, putative	join(18033..18169,18250..18439,18473..18990,19763..19861,19967..20051,20124..20182,20269..20331,20418..20494,20601..20711,20827..20883,21027..21127,21231..21366,21470..21643,21747..21841,21963..22027,22153..22253,22344..22495)	Acanthamoeba castellanii str. Neff	14922923
ACA1_157260	CDS	ACA1_157260	NW_004457611.1	23156	25414	D	encoded by transcript ACA1_157260A; uncharacterized protein	join(23156..23251,23378..23435,23506..23654,23812..23939,24006..24209,24277..24397,24479..24654,24722..24782,24900..24971,25044..25092,25179..25414)	Acanthamoeba castellanii str. Neff	14922924
ACA1_157270	CDS	ACA1_157270	NW_004457611.1	25973	28536	D	encoded by transcript ACA1_157270A; DEAD box RNA helicase	join(25973..26723,26993..27135,27239..27361,27452..27647,27739..27894,28115..28536)	Acanthamoeba castellanii str. Neff	14922925
ACA1_157280	CDS	ACA1_157280	NW_004457611.1	28713	29904	D	encoded by transcript ACA1_157280A; SYF2 splicing factor, putative	join(28713..28891,29004..29245,29328..29431,29512..29615,29739..29904)	Acanthamoeba castellanii str. Neff	14922926
ACA1_157290	CDS	ACA1_157290	NW_004457611.1	31567	33590	D	encoded by transcript ACA1_157290A; ankyrin, putative	join(31567..31671,31754..31993,32076..32162,32236..32353,32465..32506,32620..32729,32822..32908,33045..33195,33358..33590)	Acanthamoeba castellanii str. Neff	14922927
ACA1_157300	CDS	ACA1_157300	NW_004457611.1	33734	35460	D	encoded by transcript ACA1_157300A; eukaryotic dna topoisomerase, putative	join(33734..33904,34022..34073,34169..34793,34804..35095,35179..35292,35377..35460)	Acanthamoeba castellanii str. Neff	14922928
ACA1_157310	CDS	ACA1_157310	NW_004457611.1	35858	40144	D	encoded by transcript ACA1_157310A; uncharacterized protein	join(35858..36294,36338..36432,36545..36813,36885..37013,37180..37260,37459..37550,37627..37790,37899..38023,38188..38262,38435..38674,38784..38888,38903..38981,39046..39272,39353..39515,39621..40144)	Acanthamoeba castellanii str. Neff	14922929
ACA1_157320	CDS	ACA1_157320	NW_004457611.1	40276	46530	R	encoded by transcript ACA1_157320A; uncharacterized protein	complement(join(40276..40365,40466..40645,40752..40912,41021..41219,41313..41482,41591..41738,41754..41868,41902..41938,42080..42166,42198..42498,42551..42631,42699..42869,42947..43236,43329..43416,43493..43647,43738..43931,44065..44636,44792..44968,45058..45212,45292..45487,45564..45648,45727..45787,45859..45915,45941..46380,46451..46530))	Acanthamoeba castellanii str. Neff	14922930
ACA1_157330	CDS	ACA1_157330	NW_004457611.1	47468	49233	D	encoded by transcript ACA1_157330A; adenylate kinase superfamily protein	join(47468..47528,47837..48039,48218..48356,48485..48603,48747..48901,49122..49233)	Acanthamoeba castellanii str. Neff	14922931
ACA1_157340	CDS	ACA1_157340	NW_004457611.1	50366	52085	D	encoded by transcript ACA1_157340A; uncharacterized protein	join(50366..50593,50901..52085)	Acanthamoeba castellanii str. Neff	14922932
ACA1_157350	CDS	ACA1_157350	NW_004457611.1	53830	54938	D	encoded by transcript ACA1_157350A; GATA zinc finger domain containing protein	join(53830..53835,54030..54938)	Acanthamoeba castellanii str. Neff	14922933
ACA1_157360	CDS	ACA1_157360	NW_004457611.1	55615	61208	D	encoded by transcript ACA1_157360A; calponin domain containing protein	join(55615..55826,55986..56092,56200..56295,56445..56629,56841..56915,60870..61208)	Acanthamoeba castellanii str. Neff	14922934
ACA1_157470	CDS	ACA1_157470	NW_004457611.1	61483	63419	D	encoded by transcript ACA1_157470A; uncharacterized protein	join(61483..61623,61697..61766,61848..61897,62008..62193,62467..62545,62712..62903,63035..63136,63259..63419)	Acanthamoeba castellanii str. Neff	14922935
ACA1_157480	CDS	ACA1_157480	NW_004457611.1	63539	64138	R	encoded by transcript ACA1_157480A; Ras family protein	complement(63539..64138)	Acanthamoeba castellanii str. Neff	14922936
ACA1_157490	CDS	ACA1_157490	NW_004457611.1	64389	65514	R	encoded by transcript ACA1_157490A; acetyltransferase, GNAT superfamily protein	complement(join(64389..64561,64656..64754,64838..64875,64955..65072,65174..65259,65339..65514))	Acanthamoeba castellanii str. Neff	14922937
ACA1_157500	CDS	ACA1_157500	NW_004457611.1	66550	68259	D	encoded by transcript ACA1_157500A; Ras subfamily protein	join(66550..66724,66824..67257,67384..67538,67630..67696,67868..68049,68148..68259)	Acanthamoeba castellanii str. Neff	14922938
ACA1_157510	CDS	ACA1_157510	NW_004457611.1	68368	68877	R	encoded by transcript ACA1_157510A; CMP/dCMP deaminase, zincbinding, putative	complement(68368..68877)	Acanthamoeba castellanii str. Neff	14922939
ACA1_157520	CDS	ACA1_157520	NW_004457611.1	69720	71964	D	encoded by transcript ACA1_157520A; carbohydrate binding domain cbm49 protein	join(69720..70179,70374..70693,70842..70931,71006..71129,71243..71376,71575..71706,71758..71815,71945..71964)	Acanthamoeba castellanii str. Neff	14922940
ACA1_157530	CDS	ACA1_157530	NW_004457611.1	72313	76091	R	encoded by transcript ACA1_157530A; uncharacterized protein	complement(join(72313..72421,72500..74283,74618..74785,74998..75255,75353..75409,75583..75679,75982..76091))	Acanthamoeba castellanii str. Neff	14922941
ACA1_157540	CDS	ACA1_157540	NW_004457611.1	77090	81989	R	encoded by transcript ACA1_157540A; Prokumamolisin, activation domain containing protein	complement(join(77090..77171,77376..77466,77558..77740,77952..78066,78170..78282,78389..78469,78547..78596,78699..78743,78820..78886,78962..79129,79278..79422,79515..79645,79830..79888,79972..80069,80169..80290,80379..80432,80555..80656,80780..80878,81123..81191,81280..81315,81407..81449,81545..81602,81850..81989))	Acanthamoeba castellanii str. Neff	14922942
ACA1_157550	CDS	ACA1_157550	NW_004457611.1	82239	83604	R	encoded by transcript ACA1_157550A; haloacid dehalogenaselike hydrolase domain containing protein	complement(join(82239..82314,82462..82548,82642..82750,82872..82944,83023..83130,83219..83260,83335..83411,83535..83604))	Acanthamoeba castellanii str. Neff	14922943
ACA1_157560	CDS	ACA1_157560	NW_004457611.1	83744	86070	D	encoded by transcript ACA1_157560A; 3oxoacyl-[acyl-carrier protein] reductase, putative	join(83744..83855,83918..83976,84084..84152,84247..84342,84462..84540,84626..84712,84803..84946,85065..85139,85380..85897,86047..86070)	Acanthamoeba castellanii str. Neff	14922944
ACA1_157570	CDS	ACA1_157570	NW_004457611.1	89304	90069	D	encoded by transcript ACA1_157570A; RNA-dependent DNA polymerase, putative	join(89304..89784,89945..90069)	Acanthamoeba castellanii str. Neff	14922945
ACA1_157580	CDS	ACA1_157580	NW_004457611.1	90412	91412	D	encoded by transcript ACA1_157580A; uncharacterized protein	join(90412..90616,90799..90916,90991..91183,91224..91412)	Acanthamoeba castellanii str. Neff	14922946
ACA1_157590	CDS	ACA1_157590	NW_004457611.1	91767	95863	D	encoded by transcript ACA1_157590A; uncharacterized protein	join(91767..91918,91995..92200,92286..92564,92654..92724,92810..93031,93114..93243,93360..93544,93636..93983,94080..94177,94308..94513,94619..94897,94964..95034,95109..95330,95421..95544,95622..95863)	Acanthamoeba castellanii str. Neff	14922947
ACA1_157600	CDS	ACA1_157600	NW_004457611.1	96452	97459	D	encoded by transcript ACA1_157600A; NmrAlike family protein	join(96452..96499,96522..96646,96707..97129,97213..97459)	Acanthamoeba castellanii str. Neff	14922948
ACA1_157710	CDS	ACA1_157710	NW_004457611.1	101345	103355	R	encoded by transcript ACA1_157710A; mitogen-activated protein kinase kinase	complement(join(101345..101380,101501..101866,102037..102112,102220..102386,102477..102610,102712..102956,103105..103355))	Acanthamoeba castellanii str. Neff	14922949
ACA1_157720	CDS	ACA1_157720	NW_004457611.1	103776	105707	R	encoded by transcript ACA1_157720A; UBX domain containing protein	complement(join(103776..103890,103986..104104,104231..104415,104469..104597,104705..104762,104902..105002,105131..105405,105483..105529,105615..105707))	Acanthamoeba castellanii str. Neff	14922950
ACA1_157730	CDS	ACA1_157730	NW_004457611.1	105949	108126	D	encoded by transcript ACA1_157730A; ankyrin repeat domain 13 isoform 4, putative	join(105949..106332,106443..106529,106645..106750,106839..106946,107036..107151,107233..107401,107511..107577,107657..107802,107902..108008,108109..108126)	Acanthamoeba castellanii str. Neff	14922951
ACA1_157740	CDS	ACA1_157740	NW_004457611.1	108487	109615	R	encoded by transcript ACA1_157740A; rasrelated C3 botulinum toxin substrate 2, putative	complement(join(108487..108663,108790..108885,108975..109096,109186..109271,109428..109491,109579..109615))	Acanthamoeba castellanii str. Neff	14922952
ACA1_157750	CDS	ACA1_157750	NW_004457611.1	110128	111159	D	encoded by transcript ACA1_157750A; COMM domain containing 9, putative	join(110128..110310,110444..110522,110554..110717,110820..110977,111093..111159)	Acanthamoeba castellanii str. Neff	14922953
ACA1_157760	CDS	ACA1_157760	NW_004457611.1	111328	112730	D	encoded by transcript ACA1_157760A; glutathione Stransferase, C-terminal domain containing protein	join(111328..111655,111777..111918,112031..112150,112265..112421,112536..112730)	Acanthamoeba castellanii str. Neff	14922954
ACA1_157770	CDS	ACA1_157770	NW_004457611.1	112904	114979	R	encoded by transcript ACA1_157770A; uracilDNA glycosylase	complement(join(112904..113002,113145..113268,113377..113451,113579..113670,113817..113933,114060..114098,114203..114289,114416..114651,114789..114873,114941..114979))	Acanthamoeba castellanii str. Neff	14922955
ACA1_157780	CDS	ACA1_157780	NW_004457611.1	115147	116282	D	encoded by transcript ACA1_157780A; polysaccharide deacetylase domain containing protein	join(115147..115203,115387..115592,115672..115784,115857..115965,116040..116154,116235..116282)	Acanthamoeba castellanii str. Neff	14922956
ACA1_157790	CDS	ACA1_157790	NW_004457611.1	116372	119655	R	encoded by transcript ACA1_157790A; PH domain containing protein	complement(join(116372..116467,116602..116730,116812..117527,117542..117560,117698..117983,118077..118130,118203..118231,118251..118293,118328..118590,118686..119405,119623..119655))	Acanthamoeba castellanii str. Neff	14922957
ACA1_157800	CDS	ACA1_157800	NW_004457611.1	119933	120802	R	encoded by transcript ACA1_157800A; reductase	complement(join(119933..120196,120311..120802))	Acanthamoeba castellanii str. Neff	14922958
ACA1_157810	CDS	ACA1_157810	NW_004457611.1	121026	123062	R	encoded by transcript ACA1_157810A; amidohydrolase family protein	complement(join(121026..121211,121276..121445,121537..121708,121832..121916,122010..122079,122149..122242,122350..122425,122555..122628,122730..122801,122916..123062))	Acanthamoeba castellanii str. Neff	14922959
ACA1_157820	CDS	ACA1_157820	NW_004457611.1	123187	124471	D	encoded by transcript ACA1_157820A; uncharacterized protein	join(123187..123345,123438..123519,123626..123750,123880..123981,124115..124205,124323..124471)	Acanthamoeba castellanii str. Neff	14922960
ACA1_157830	CDS	ACA1_157830	NW_004457611.1	124601	125311	R	encoded by transcript ACA1_157830A; NHL repeat-containing protein	complement(join(124601..125116,125156..125311))	Acanthamoeba castellanii str. Neff	14922961
ACA1_157840	CDS	ACA1_157840	NW_004457611.1	125744	128133	R	encoded by transcript ACA1_157840A; uncharacterized protein	complement(join(125744..125920,125980..126083,126155..126230,126321..126370,126426..126877,126956..128133))	Acanthamoeba castellanii str. Neff	14922962
ACA1_157850	CDS	ACA1_157850	NW_004457611.1	128390	129814	R	encoded by transcript ACA1_157850A; endonuclease/exonuclease/phosphatase family protein	complement(join(128390..128825,128928..129032,129129..129214,129301..129437,129513..129618,129695..129814))	Acanthamoeba castellanii str. Neff	14922963
ACA1_157860	CDS	ACA1_157860	NW_004457611.1	130038	133045	R	encoded by transcript ACA1_157860A; FAD binding domain containing protein	complement(join(130038..130217,130344..130440,130522..130612,130740..130862,130967..131047,131127..131214,131531..131621,131705..131841,131938..132051,132158..132260,132348..132528,132673..133045))	Acanthamoeba castellanii str. Neff	14922964
ACA1_157870	CDS	ACA1_157870	NW_004457611.1	133444	139063	R	encoded by transcript ACA1_157870A; RNA recognition motif domain containing protein	complement(join(133444..133626,133740..133908,134031..134921,135027..135152,135163..135263,135274..135391,135521..135596,135693..135840,135910..136002,136130..136306,136413..136701,136795..136934,137140..137252,137330..137489,137574..137691,137770..138125,138235..138309,138490..138566,138629..138824,138899..139063))	Acanthamoeba castellanii str. Neff	14922965
ACA1_157880	CDS	ACA1_157880	NW_004457611.1	139555	141553	D	encoded by transcript ACA1_157880A; ferredoxin/adrenodoxin reductase	join(139555..140029,140087..140205,140274..140827,140964..141039,141105..141389,141485..141553)	Acanthamoeba castellanii str. Neff	14922966
ACA1_157890	CDS	ACA1_157890	NW_004457611.1	141633	143029	R	encoded by transcript ACA1_157890A; RNA binding motif protein	complement(join(141633..141920,142026..142347,142452..142483,142589..142784,142941..143029))	Acanthamoeba castellanii str. Neff	14922967
ACA1_157900	CDS	ACA1_157900	NW_004457611.1	143200	146276	D	encoded by transcript ACA1_157900A; cleavage and polyadenylation specific factor 3like, putative	join(143200..143224,143326..143503,143611..143683,143785..143902,144074..144270,144347..144454,144571..144741,144838..145068,145137..145300,145382..145694,145778..145920,146024..146276)	Acanthamoeba castellanii str. Neff	14922968
ACA1_157910	CDS	ACA1_157910	NW_004457611.1	146363	150061	D	encoded by transcript ACA1_157910A; leucine rich repeat domain containing protein	join(146363..146461,146668..146868,146987..147084,147244..147414,147482..147676,147759..147806,147821..147937,148188..148259,148395..148502,148588..148668,148741..148872,149005..149480,149583..149799,149893..150061)	Acanthamoeba castellanii str. Neff	14922969
ACA1_157920	CDS	ACA1_157920	NW_004457611.1	150251	150721	D	encoded by transcript ACA1_157920A; uncharacterized protein	150251..150721	Acanthamoeba castellanii str. Neff	14922970
ACA1_157930	CDS	ACA1_157930	NW_004457611.1	151175	154591	R	encoded by transcript ACA1_157930A; protein sey1, putative	complement(join(151175..151287,151379..151553,151625..151740,151819..151909,152009..152105,152175..152298,152371..152587,152690..152815,152897..153105,153182..153386,153475..153690,153794..153923,154040..154194,154265..154449,154513..154591))	Acanthamoeba castellanii str. Neff	14922971
ACA1_157940	CDS	ACA1_157940	NW_004457611.1	154983	157245	R	encoded by transcript ACA1_157940A; histidine acid phosphatase superfamily protein	complement(join(154983..155317,155350..155453,155551..155695,155766..155820,155927..156124,156213..156370,156459..156547,156677..156785,156936..156990,157138..157245))	Acanthamoeba castellanii str. Neff	14922972
ACA1_157950	CDS	ACA1_157950	NW_004457611.1	157510	158480	D	encoded by transcript ACA1_157950A; uncharacterized protein	join(157510..157589,157607..157747,157760..158230,158354..158480)	Acanthamoeba castellanii str. Neff	14922973
ACA1_157970	CDS	ACA1_157970	NW_004457611.1	164066	166396	R	encoded by transcript ACA1_157970A; uncharacterized protein	complement(164066..166396)	Acanthamoeba castellanii str. Neff	14922975
ACA1_157980	CDS	ACA1_157980	NW_004457611.1	167275	171633	D	encoded by transcript ACA1_157980A; protein kinase domain containing protein	join(<167275..167390,167557..167683,167885..168150,168218..168483,168571..168682,168808..168890,169032..169162,169282..169405,169526..169828,169948..170058,170168..170256,170367..170470,170579..170708,170794..170889,171009..171106,171246..171300,171526..171633)	Acanthamoeba castellanii str. Neff	14922976
ACA1_158000	CDS	ACA1_158000	NW_004457611.1	175712	182191	R	encoded by transcript ACA1_158000A; uncharacterized protein	complement(join(175712..176012,176078..176170,176256..176444,176553..176635,176790..176937,177111..177327,177443..177746,177917..178056,178182..178619,178818..179273,179514..179548,179775..179820,179964..180037,180145..180187,180337..180382,180530..181559,181920..182191))	Acanthamoeba castellanii str. Neff	14922978
ACA1_158010	CDS	ACA1_158010	NW_004457611.1	182616	183933	D	encoded by transcript ACA1_158010A; uncharacterized protein	join(182616..182880,182960..183107,183289..183413,183446..183933)	Acanthamoeba castellanii str. Neff	14922979
ACA1_158020	CDS	ACA1_158020	NW_004457611.1	184127	185413	D	encoded by transcript ACA1_158020A; uncharacterized protein	join(184127..184164,184245..184365,184484..184619,184723..184779,184902..185006,185130..185181,185260..185413)	Acanthamoeba castellanii str. Neff	14922980
ACA1_158030	CDS	ACA1_158030	NW_004457611.1	185670	186492	R	encoded by transcript ACA1_158030A; uncharacterized protein	complement(join(185670..185707,185829..185921,186002..186062,186300..186383,186454..186492))	Acanthamoeba castellanii str. Neff	14922981
ACA1_158040	CDS	ACA1_158040	NW_004457611.1	191942	193622	D	encoded by transcript ACA1_158040A; Tim44 family domain containing protein	join(191942..192100,192247..193248,193337..193450,193518..193622)	Acanthamoeba castellanii str. Neff	14922982
ACA1_158150	CDS	ACA1_158150	NW_004457611.1	196185	197336	R	encoded by transcript ACA1_158150A; integrase core domain containing protein	complement(join(<196185..196609,196635..197336))	Acanthamoeba castellanii str. Neff	14922983
ACA1_158160	CDS	ACA1_158160	NW_004457611.1	197406	198065	R	encoded by transcript ACA1_158160A; uncharacterized protein	complement(197406..198065)	Acanthamoeba castellanii str. Neff	14922984
ACA1_158170	CDS	ACA1_158170	NW_004457611.1	201077	203606	R	encoded by transcript ACA1_158170A; ribosome biogenesis pescadillolike protein	complement(join(201077..201453,201539..201683,201793..201936,202069..202227,202380..202562,202765..203026,203147..203401,203506..203606))	Acanthamoeba castellanii str. Neff	14922985
ACA1_158180	CDS	ACA1_158180	NW_004457611.1	203802	207615	D	encoded by transcript ACA1_158180A; eukaryotic translation initiation factor eif2a protein	join(203802..204034,204120..204425,204540..204624,204934..205093,205194..205364,205534..205602,205797..205939,206125..206258,206371..206434,206543..206681,206837..206904,207097..207267,207313..207615)	Acanthamoeba castellanii str. Neff	14922986
ACA1_158190	CDS	ACA1_158190	NW_004457611.1	207890	208827	R	encoded by transcript ACA1_158190A; uncharacterized protein	complement(join(207890..208342,208377..208473,208527..208642,208699..208752,208819..208827))	Acanthamoeba castellanii str. Neff	14922987
ACA1_158200	CDS	ACA1_158200	NW_004457611.1	208951	209486	R	encoded by transcript ACA1_158200A; YCIIrelated domain containing protein	complement(join(208951..209079,209144..209283,209354..209486))	Acanthamoeba castellanii str. Neff	14922988
ACA1_158210	CDS	ACA1_158210	NW_004457611.1	209933	210812	D	encoded by transcript ACA1_158210A; uncharacterized protein	join(209933..210148,210370..210456,210584..210666,210782..210812)	Acanthamoeba castellanii str. Neff	14922989
ACA1_158320	CDS	ACA1_158320	NW_004457611.1	211261	214726	R	encoded by transcript ACA1_158320A; ATPbinding cassette, sub-family D (ALD), member 4, putative	complement(join(211261..211277,211731..211843,212102..212190,212462..212562,212715..212786,213192..213244,213453..213547,213633..213717,214153..214274,214373..214726))	Acanthamoeba castellanii str. Neff	14922990
ACA1_158430	CDS	ACA1_158430	NW_004457611.1	215262	218383	D	encoded by transcript ACA1_158430A; uncharacterized protein	join(215262..215603,215728..215877,215903..216856,216981..218085,218262..218383)	Acanthamoeba castellanii str. Neff	14922991
ACA1_158440	CDS	ACA1_158440	NW_004457611.1	218590	219906	D	encoded by transcript ACA1_158440A; coiled-coil domain containing 53, putative	join(218590..218756,218881..218990,219269..219391,219487..219616,219783..219906)	Acanthamoeba castellanii str. Neff	14922992
ACA1_158450	CDS	ACA1_158450	NW_004457611.1	220228	221150	R	encoded by transcript ACA1_158450A; ubiquitinconjugating enzyme, putative	complement(join(220228..220288,220415..220494,220594..220703,220829..220961,221109..221150))	Acanthamoeba castellanii str. Neff	14922993
ACA1_158460	CDS	ACA1_158460	NW_004457611.1	221563	226553	R	encoded by transcript ACA1_158460A; DNAdirected RNA polymerase, beta subunit	complement(join(221563..221652,221755..222089,222225..222381,222462..222641,222798..222982,223164..223668,223753..223896,224044..224653,224832..225685,225847..225958,226067..226457,226526..226553))	Acanthamoeba castellanii str. Neff	14922994
ACA1_158480	CDS	ACA1_158480	NW_004457611.1	230185	234504	D	encoded by transcript ACA1_158480A; glutamine amidotransferase, putative	join(230185..230375,230468..230499,230573..230670,230727..230834,230931..231016,231117..231262,231598..231674,231860..231983,232079..232182,232262..232553,232672..232756,232859..232992,233123..233220,233319..233433,233744..233812,233901..233990,234109..234197,234309..>234504)	Acanthamoeba castellanii str. Neff	14922996
ACA1_158490	CDS	ACA1_158490	NW_004457611.1	234641	237633	D	encoded by transcript ACA1_158490A; bifunctional protein FolC subfamily protein	join(<234641..234907,235030..235102,235192..235265,235394..235628,235713..235847,236011..236045,236072..236290,236321..236434,236547..236630,236710..237633)	Acanthamoeba castellanii str. Neff	14922997
ACA1_158500	CDS	ACA1_158500	NW_004457611.1	237969	240052	D	encoded by transcript ACA1_158500A; hydrolase nudix family protein	join(237969..238018,238159..238310,238467..238699,238816..238899,239050..239124,239231..239288,239429..239620,239730..240052)	Acanthamoeba castellanii str. Neff	14922998
ACA1_158510	CDS	ACA1_158510	NW_004457611.1	240526	242378	R	encoded by transcript ACA1_158510A; uncharacterized protein	complement(join(240526..240814,240894..241066,241177..241263,241404..241445,241658..241808,242032..242172,242248..242378))	Acanthamoeba castellanii str. Neff	14922999
ACA1_158520	CDS	ACA1_158520	NW_004457611.1	242418	243034	R	encoded by transcript ACA1_158520A; PH domain containing protein	complement(join(242418..242645,242746..242797,242868..242938,243008..243034))	Acanthamoeba castellanii str. Neff	14923000
ACA1_158530	CDS	ACA1_158530	NW_004457611.1	243331	245988	D	encoded by transcript ACA1_158530A; glucose6-phosphate dehydrogenase, C-terminal domain containing protein	join(243331..243606,243671..243842,243957..244057,244171..244273,244377..244462,244498..244646,244741..244929,245016..245074,245264..245296,245370..245492,245611..245652,245736..245827,245914..245988)	Acanthamoeba castellanii str. Neff	14923001
ACA1_158540	CDS	ACA1_158540	NW_004457611.1	246773	248167	D	encoded by transcript ACA1_158540A; GATA zinc finger domain containing protein	join(246773..246808,246859..247799,247915..248167)	Acanthamoeba castellanii str. Neff	14923002
ACA1_158550	CDS	ACA1_158550	NW_004457611.1	248338	249905	D	encoded by transcript ACA1_158550A; enoyl-CoA hydratase, putative	join(248338..248517,248651..248744,248853..248957,249037..249111,249214..249317,249445..249568,249654..249787,249840..249905)	Acanthamoeba castellanii str. Neff	14923003
ACA1_158560	CDS	ACA1_158560	NW_004457611.1	250006	250497	R	encoded by transcript ACA1_158560A; uncharacterized protein	complement(join(250006..250167,250280..250356,250422..250497))	Acanthamoeba castellanii str. Neff	14923004
ACA1_158670	CDS	ACA1_158670	NW_004457611.1	250594	251531	D	encoded by transcript ACA1_158670A; uncharacterized protein	join(<250594..250789,250857..250909,250997..251088,251185..251336,251503..251531)	Acanthamoeba castellanii str. Neff	14923005
ACA1_158780	CDS	ACA1_158780	NW_004457611.1	251900	256158	R	encoded by transcript ACA1_158780A; uncharacterized protein	complement(join(251900..252077,252161..252211,252325..252452,252559..252642,252781..252921,253017..253164,253259..253320,253439..253664,253804..253912,254005..254093,254210..254325,254422..254613,254703..254936,255078..255182,255298..255341,255415..255590,255718..255935,256117..256158))	Acanthamoeba castellanii str. Neff	14923006
ACA1_158790	CDS	ACA1_158790	NW_004457611.1	256385	257654	D	encoded by transcript ACA1_158790A; 2cys peroxiredoxin, putative	join(256385..256532,256680..256736,256836..256915,257022..257141,257209..257299,257399..257502,257601..257654)	Acanthamoeba castellanii str. Neff	14923007
ACA1_158800	CDS	ACA1_158800	NW_004457611.1	258031	258486	D	encoded by transcript ACA1_158800A; iron sulfur assembly protein 1, putative	join(258031..258271,258338..258486)	Acanthamoeba castellanii str. Neff	14923008
ACA1_158810	CDS	ACA1_158810	NW_004457611.1	258663	259977	R	encoded by transcript ACA1_158810A; epsilon subunit of coatomer protein complex isoform 1, putative	complement(join(258663..258771,258860..258948,259034..259201,259347..259482,259568..259977))	Acanthamoeba castellanii str. Neff	14923009
ACA1_158820	CDS	ACA1_158820	NW_004457611.1	260234	263323	D	encoded by transcript ACA1_158820A; uncharacterized protein	join(260234..260365,260438..260529,260655..260829,260900..261008,261102..261148,261256..261362,261441..261639,261742..262116,262220..262437,262554..262643,262767..262928,263044..263323)	Acanthamoeba castellanii str. Neff	14923010
ACA1_158830	CDS	ACA1_158830	NW_004457611.1	263468	274878	D	encoded by transcript ACA1_158830A; Beige/BEACH domain containing protein	join(263468..263546,263636..263766,263887..264040,264144..264234,264346..264543,264627..264852,264944..265235,265312..265602,265703..265884,265989..266080,266188..266550,266630..266732,266854..267118,267192..267315,267465..267618,267750..267902,268001..268114,268231..268353,268459..268553,268644..268902,268996..269100,269200..269322,269457..269672,269773..270006,270083..270160,270233..270587,270712..270857,270935..271065,271185..271240,271330..271445,271542..271652,271734..271854,271970..272105,272184..272252,272352..272487,272595..272741,272850..273000,273068..273135,273229..273414,273516..273767,273856..274038,274171..274271,274386..274878)	Acanthamoeba castellanii str. Neff	14923011
ACA1_158840	CDS	ACA1_158840	NW_004457611.1	274984	276831	R	encoded by transcript ACA1_158840A; metal dependent phosphohydrolase	complement(join(274984..275551,275605..275704,275768..276015,276079..276234,276350..276831))	Acanthamoeba castellanii str. Neff	14923012
ACA1_158860	CDS	ACA1_158860	NW_004457611.1	283458	287813	D	encoded by transcript ACA1_158860A; protein kinase domain containing protein	join(283458..283713,284033..284140,284264..284392,284573..284790,284901..285244,285369..285449,285564..285783,285910..286051,286129..286217,286301..286377,286468..286623,286726..286847,286926..287017,287096..287400,287450..287528,287565..287813)	Acanthamoeba castellanii str. Neff	14923014
ACA1_158870	CDS	ACA1_158870	NW_004457611.1	288002	292617	D	encoded by transcript ACA1_158870A; uncharacterized protein	join(288002..288091,288368..288656,289001..289123,289245..289392,289581..289759,289938..290163,290340..290479,290615..290730,290817..290906,291023..291424,291514..291651,291746..291916,292036..292152,292217..292331,292451..292617)	Acanthamoeba castellanii str. Neff	14923015
ACA1_158880	CDS	ACA1_158880	NW_004457611.1	292711	292985	D	encoded by transcript ACA1_158880A; uncharacterized protein	join(292711..292792,292819..292985)	Acanthamoeba castellanii str. Neff	14923016
ACA1_158890	CDS	ACA1_158890	NW_004457611.1	293149	293805	R	encoded by transcript ACA1_158890A; uncharacterized protein	complement(join(293149..293302,293413..293568,293678..293805))	Acanthamoeba castellanii str. Neff	14923017
ACA1_158900	CDS	ACA1_158900	NW_004457611.1	294748	295160	D	encoded by transcript ACA1_158900A; uncharacterized protein	join(294748..294888,295056..>295160)	Acanthamoeba castellanii str. Neff	14923018
ACA1_158910	CDS	ACA1_158910	NW_004457611.1	295346	296907	R	encoded by transcript ACA1_158910A; uncharacterized protein	complement(join(295346..295381,295477..295626,295713..295819,295958..296040,296194..296497,296583..296907))	Acanthamoeba castellanii str. Neff	14923019
ACA1_158920	CDS	ACA1_158920	NW_004457611.1	297624	298621	D	encoded by transcript ACA1_158920A; uncharacterized protein	join(297624..297764,297873..298331,298415..298621)	Acanthamoeba castellanii str. Neff	14923020
ACA1_158930	CDS	ACA1_158930	NW_004457611.1	298931	299592	D	encoded by transcript ACA1_158930A; uncharacterized protein	join(298931..299052,299124..299211,299316..299488,299577..299592)	Acanthamoeba castellanii str. Neff	14923021
ACA1_158940	CDS	ACA1_158940	NW_004457611.1	299884	302398	D	encoded by transcript ACA1_158940A; oxidoreductase	join(299884..300500,300584..300646,300717..300917,301001..301302,301385..301524,301618..301716,301855..301950,302052..302228,302324..302398)	Acanthamoeba castellanii str. Neff	14923022
ACA1_158950	CDS	ACA1_158950	NW_004457611.1	302511	305074	D	encoded by transcript ACA1_158950A; uncharacterized protein	join(302511..302753,302845..302922,303005..303280,303409..303624,303753..303946,304050..304181,304283..304404,304491..304561,304676..305074)	Acanthamoeba castellanii str. Neff	14923023
ACA1_158960	CDS	ACA1_158960	NW_004457611.1	305252	305557	R	encoded by transcript ACA1_158960A; uncharacterized protein	complement(305252..305557)	Acanthamoeba castellanii str. Neff	14923024
ACA1_158970	CDS	ACA1_158970	NW_004457611.1	305811	306293	R	encoded by transcript ACA1_158970A; uncharacterized protein	complement(305811..306293)	Acanthamoeba castellanii str. Neff	14923025
ACA1_158980	CDS	ACA1_158980	NW_004457611.1	306459	307985	R	encoded by transcript ACA1_158980A; GATA zinc finger domain containing protein	complement(join(306459..306495,306603..306739,307047..307985))	Acanthamoeba castellanii str. Neff	14923026
ACA1_158990	CDS	ACA1_158990	NW_004457611.1	309400	310821	R	encoded by transcript ACA1_158990A; uncharacterized protein	complement(join(309400..309434,309562..310031,310049..310821))	Acanthamoeba castellanii str. Neff	14923027
ACA1_159000	CDS	ACA1_159000	NW_004457611.1	314864	316752	R	encoded by transcript ACA1_159000A; uncharacterized protein	complement(join(314864..314950,315113..315218,315349..315362,315485..315649,315687..315957,316105..316238,316516..316752))	Acanthamoeba castellanii str. Neff	14923028
ACA1_159010	CDS	ACA1_159010	NW_004457611.1	317097	318593	D	encoded by transcript ACA1_159010A; NmrAlike family protein	join(317097..317131,317247..317427,317524..317637,317723..317831,317905..318065,318144..318225,318304..318424,318449..318593)	Acanthamoeba castellanii str. Neff	14923029
ACA1_159020	CDS	ACA1_159020	NW_004457611.1	318679	319556	R	encoded by transcript ACA1_159020A; uncharacterized protein	complement(join(318679..318719,318807..318872,319015..319063,319161..319273,319353..319436,319499..319556))	Acanthamoeba castellanii str. Neff	14923030
ACA1_159030	CDS	ACA1_159030	NW_004457611.1	320145	324126	D	encoded by transcript ACA1_159030A; peptidase, M28 family protein	join(320145..320656,320741..320870,320947..321000,321102..321707,321800..321911,322037..322130,322224..322353,322464..322626,322745..322801,322937..323070,323366..323522,323647..323797,323895..324126)	Acanthamoeba castellanii str. Neff	14923031
ACA1_159040	CDS	ACA1_159040	NW_004457611.1	324241	325029	R	encoded by transcript ACA1_159040A; uncharacterized protein	complement(join(324241..324341,324438..325029))	Acanthamoeba castellanii str. Neff	14923032
ACA1_159050	CDS	ACA1_159050	NW_004457611.1	325904	327894	D	encoded by transcript ACA1_159050A; uncharacterized protein	join(325904..326155,326297..326380,326492..326556,326695..326823,326892..326941,327120..327185,327254..327300,327462..327623,327742..327894)	Acanthamoeba castellanii str. Neff	14923033
ACA1_159060	CDS	ACA1_159060	NW_004457611.1	328656	332449	D	encoded by transcript ACA1_159060A; Rrm3p helicase	join(328656..328988,329106..329296,329390..329623,329719..329791,329870..330046,330163..330363,330466..330779,330794..330902,330993..331094,331201..331267,331407..331536,331665..331774,331897..331972,332053..332118,332215..332449)	Acanthamoeba castellanii str. Neff	14923034
ACA1_159070	CDS	ACA1_159070	NW_004457611.1	332818	334617	D	encoded by transcript ACA1_159070A; mucin, putative	join(332818..332974,333076..333218,333322..333404,333487..333599,333688..333808,333907..334099,334165..334321,334418..>334617)	Acanthamoeba castellanii str. Neff	14923035
ACA1_159080	CDS	ACA1_159080	NW_004457611.1	334714	337137	D	encoded by transcript ACA1_159080A; papain family cysteine protease subfamily protein	join(<334714..334996,335101..335173,335275..335545,335618..335859,335952..336025,336116..336210,336310..336625,336714..336892,336997..337137)	Acanthamoeba castellanii str. Neff	14923036
ACA1_159090	CDS	ACA1_159090	NW_004457611.1	337258	338347	R	encoded by transcript ACA1_159090A; uncharacterized protein	complement(join(337258..338093,338164..338347))	Acanthamoeba castellanii str. Neff	14923037
ACA1_159110	CDS	ACA1_159110	NW_004457611.1	339424	339812	R	encoded by transcript ACA1_159110A; uncharacterized protein	complement(join(339424..339486,339569..339665,339703..339812))	Acanthamoeba castellanii str. Neff	14923039
ACA1_159120	CDS	ACA1_159120	NW_004457611.1	340118	341419	D	encoded by transcript ACA1_159120A; uncharacterized protein	join(340118..340193,340298..340630,340743..341419)	Acanthamoeba castellanii str. Neff	14923040
ACA1_159130	CDS	ACA1_159130	NW_004457611.1	341615	342856	R	encoded by transcript ACA1_159130A; uncharacterized protein	complement(join(341615..341755,341810..342109,342225..342353,342509..342681,342787..342856))	Acanthamoeba castellanii str. Neff	14923041
ACA1_159140	CDS	ACA1_159140	NW_004457611.1	343182	344050	R	encoded by transcript ACA1_159140A; uncharacterized protein	complement(join(343182..343592,343661..343711,343798..343859,343918..344050))	Acanthamoeba castellanii str. Neff	14923042
ACA1_159160	CDS	ACA1_159160	NW_004457611.1	348479	349354	R	encoded by transcript ACA1_159160A; uncharacterized protein	complement(join(348479..348991,349096..349201,349287..349354))	Acanthamoeba castellanii str. Neff	14923046
ACA1_159170	CDS	ACA1_159170	NW_004457611.1	349554	351191	R	encoded by transcript ACA1_159170A; uncharacterized protein	complement(join(349554..349696,349805..349952,350064..350171,350317..350398,350592..350736,350867..351191))	Acanthamoeba castellanii str. Neff	14923044
ACA1_159180	CDS	ACA1_159180	NW_004457611.1	354579	356129	D	encoded by transcript ACA1_159180A; uncharacterized protein	join(354579..354638,354732..354752,354872..354976,355013..355118,355179..355209,355599..355784,355808..356014,356063..356129)	Acanthamoeba castellanii str. Neff	14923045
ACA1_159190	CDS	ACA1_159190	NW_004457611.1	357444	359425	R	encoded by transcript ACA1_159190A; uncharacterized protein	complement(join(357444..357570,357633..357771,357857..357926,357999..358081,358155..358261,358416..358634,358768..358951,358987..359086,359243..359338,359369..359425))	Acanthamoeba castellanii str. Neff	14923047
ACA1_159200	CDS	ACA1_159200	NW_004457611.1	359589	363060	D	encoded by transcript ACA1_159200A; DNA 3'phosphatase	join(359589..359627,360041..360478,360592..360778,360902..361017,361088..361146,361286..361415,361514..361633,361716..361842,361936..362064,362127..362251,362429..362512,362602..362679,362789..362829,362925..363060)	Acanthamoeba castellanii str. Neff	14923048
ACA1_159210	CDS	ACA1_159210	NW_004457611.1	363106	365075	D	encoded by transcript ACA1_159210A; MYND finger domain containing protein	join(363106..363156,363244..363501,363553..363662,363724..363867,364011..364032,364103..364179,364258..364372,364414..364491,364565..364680,364760..364833,364927..365075)	Acanthamoeba castellanii str. Neff	14923049
ACA1_159220	CDS	ACA1_159220	NW_004457611.1	365704	367087	D	encoded by transcript ACA1_159220A; uncharacterized protein	join(365704..365715,365935..366118,366166..366251,366323..366402,366504..366669,366873..366942,367035..367087)	Acanthamoeba castellanii str. Neff	14923050
ACA1_159430	CDS	ACA1_159430	NW_004457611.1	367226	367625	R	encoded by transcript ACA1_159430A; uncharacterized protein	complement(join(367226..367310,367391..367518,367578..367625))	Acanthamoeba castellanii str. Neff	14923051
ACA1_159440	CDS	ACA1_159440	NW_004457611.1	367969	368618	D	encoded by transcript ACA1_159440A; developmentally regulated GTP binding protein 2, putative	join(367969..368088,368226..368311,368437..>368618)	Acanthamoeba castellanii str. Neff	14923052
ACA1_159550	CDS	ACA1_159550	NW_004457611.1	369016	370399	R	encoded by transcript ACA1_159550A; poly(A)-specific ribonuclease, putative	complement(join(369016..369204,369280..369380,369539..369683,369807..369919,370027..370147,370250..>370399))	Acanthamoeba castellanii str. Neff	14923053
ACA1_159660	CDS	ACA1_159660	NW_004457611.1	370594	371517	D	encoded by transcript ACA1_159660A; developmentally regulated GTP binding protein	join(<370594..370633,370764..370861,370961..371129,371204..371279,371394..371517)	Acanthamoeba castellanii str. Neff	14923054
ACA1_159670	CDS	ACA1_159670	NW_004457611.1	371653	372466	R	encoded by transcript ACA1_159670A; uncharacterized protein	complement(join(371653..371703,371795..372466))	Acanthamoeba castellanii str. Neff	14923055
ACA1_159780	CDS	ACA1_159780	NW_004457611.1	374175	375056	R	encoded by transcript ACA1_159780A; Sel1 repeatcontaining protein	complement(join(374175..374323,374536..374883,375026..375056))	Acanthamoeba castellanii str. Neff	14923056
ACA1_159790	CDS	ACA1_159790	NW_004457611.1	375941	376651	D	encoded by transcript ACA1_159790A; uncharacterized protein	join(375941..376128,376234..376316,376401..376651)	Acanthamoeba castellanii str. Neff	14923057
ACA1_159800	CDS	ACA1_159800	NW_004457611.1	379360	382212	D	encoded by transcript ACA1_159800A; aminotransferase, class III superfamily protein	join(379360..379801,380141..380257,380363..380455,380568..380669,380789..380943,381017..381190,381281..381439,381544..381823,381905..382212)	Acanthamoeba castellanii str. Neff	14923058
ACA1_159810	CDS	ACA1_159810	NW_004457611.1	384132	385460	R	encoded by transcript ACA1_159810A; uncharacterized protein	complement(384132..385460)	Acanthamoeba castellanii str. Neff	14923059
ACA1_159820	CDS	ACA1_159820	NW_004457611.1	386052	387803	R	encoded by transcript ACA1_159820A; uncharacterized protein	complement(join(386052..387670,387794..387803))	Acanthamoeba castellanii str. Neff	14923060
ACA1_159830	CDS	ACA1_159830	NW_004457611.1	388559	390122	R	encoded by transcript ACA1_159830A; proteasome subunit beta type4, putative	complement(join(388559..388654,388752..388959,389078..389158,389257..389322,389560..389689,389793..389869,389980..390122))	Acanthamoeba castellanii str. Neff	14923061
ACA1_159840	CDS	ACA1_159840	NW_004457611.1	390333	392334	R	encoded by transcript ACA1_159840A; CCDC49 protein	complement(join(390333..390444,390541..391787,391875..392031,392150..392334))	Acanthamoeba castellanii str. Neff	14923062
ACA1_159850	CDS	ACA1_159850	NW_004457611.1	392693	393853	D	encoded by transcript ACA1_159850A; uncharacterized protein	join(392693..392776,392908..392980,393050..393148,393227..393288,393381..393449,393537..393644,393713..>393853)	Acanthamoeba castellanii str. Neff	14923063
ACA1_159960	CDS	ACA1_159960	NW_004457611.1	394201	395226	D	encoded by transcript ACA1_159960A; MORN domain repeat containing protein	join(<394201..394594,394704..394841,394922..394982,395076..395226)	Acanthamoeba castellanii str. Neff	14923064
ACA1_159970	CDS	ACA1_159970	NW_004457611.1	395592	397780	D	encoded by transcript ACA1_159970A; ankyrin repeat-containing protein	join(395592..396137,396276..396434,396551..396815,396889..397089,397218..397780)	Acanthamoeba castellanii str. Neff	14923065
ACA1_159980	CDS	ACA1_159980	NW_004457611.1	398166	401486	R	encoded by transcript ACA1_159980A; anaphase promoting complex subunit 10-like family protein, putative	complement(join(398166..398360,398420..398476,398786..398992,399105..399186,399497..399552,399718..399745,399840..399930,400017..400103,400252..400333,400461..400530,400634..400732,400829..400896,401050..401142,401248..401308,401371..401486))	Acanthamoeba castellanii str. Neff	14923066
ACA1_159990	CDS	ACA1_159990	NW_004457611.1	402669	404339	D	encoded by transcript ACA1_159990A; uncharacterized protein	join(402669..402838,402938..402987,403083..403164,403297..403386,403511..403592,403683..403931,404005..404061,404205..404339)	Acanthamoeba castellanii str. Neff	14923067
ACA1_160000	CDS	ACA1_160000	NW_004457611.1	404394	405755	R	encoded by transcript ACA1_160000A; uncharacterized protein	complement(join(404394..404458,404793..404874,404950..405394,405430..405524,405627..>405755))	Acanthamoeba castellanii str. Neff	14923068
ACA1_160010	CDS	ACA1_160010	NW_004457611.1	407485	407817	D	encoded by transcript ACA1_160010A; uncharacterized protein	407485..407817	Acanthamoeba castellanii str. Neff	14923069
ACA1_160020	CDS	ACA1_160020	NW_004457611.1	408119	409461	R	encoded by transcript ACA1_160020A; uncharacterized protein	complement(join(408119..408183,408509..408590,408666..409110,409146..409240,409333..>409461))	Acanthamoeba castellanii str. Neff	14923070
ACA1_160030	CDS	ACA1_160030	NW_004457611.1	410624	410856	D	encoded by transcript ACA1_160030A; uncharacterized protein	join(410624..410663,410717..410856)	Acanthamoeba castellanii str. Neff	14923071
ACA1_160040	CDS	ACA1_160040	NW_004457611.1	410902	413754	R	encoded by transcript ACA1_160040A; ribonuclease, putative	complement(join(410902..411090,411193..411293,411419..411563,411690..411802,411907..412027,412131..412282,412365..412434,412498..412615,412729..412833,412909..413060,413140..413275,413359..413447,413529..413581,413658..413754))	Acanthamoeba castellanii str. Neff	14923072
ACA1_160150	CDS	ACA1_160150	NW_004457611.1	419508	420219	R	encoded by transcript ACA1_160150A; uncharacterized protein	complement(join(419508..419528,419679..419997,420050..420219))	Acanthamoeba castellanii str. Neff	14923073
ACA1_160160	CDS	ACA1_160160	NW_004457611.1	422217	423494	R	encoded by transcript ACA1_160160A; cellulose binding domain containing protein	complement(422217..423494)	Acanthamoeba castellanii str. Neff	14923074
ACA1_160170	CDS	ACA1_160170	NW_004457611.1	424064	426251	R	encoded by transcript ACA1_160170A; xanthine dehydrogenase	complement(join(424064..424269,424354..424500,424618..424687,424813..425097,425171..425281,425370..425446,425535..425828,425918..426028,426125..426251))	Acanthamoeba castellanii str. Neff	14923075
ACA1_160280	CDS	ACA1_160280	NW_004457611.1	429381	429871	R	encoded by transcript ACA1_160280A; aldehyde oxidase 1, putative	complement(join(429381..429411,429498..429641,429777..429871))	Acanthamoeba castellanii str. Neff	14923076
ACA1_160390	CDS	ACA1_160390	NW_004457611.1	431161	432052	D	encoded by transcript ACA1_160390A; uncharacterized protein	join(431161..431188,431302..431388,431472..431542,431663..431803,431918..432052)	Acanthamoeba castellanii str. Neff	14923077
ACA1_160400	CDS	ACA1_160400	NW_004457611.1	432161	432397	R	encoded by transcript ACA1_160400A; uncharacterized protein	complement(join(432161..432328,432341..432397))	Acanthamoeba castellanii str. Neff	14923078
ACA1_325410	CDS	ACA1_325410	NW_004457610.1	11	1285	D	encoded by transcript ACA1_325410A; uncharacterized protein	join(11..175,380..472,519..690,706..870,963..1285)	Acanthamoeba castellanii str. Neff	14922916
ACA1_325420	CDS	ACA1_325420	NW_004457610.1	3618	4943	D	encoded by transcript ACA1_325420A; quinolinate phosphoribosyl transferase, cterminal domain containing protein	join(3618..3899,3989..4136,4253..4408,4532..4680,4830..4943)	Acanthamoeba castellanii str. Neff	14922890
ACA1_325430	CDS	ACA1_325430	NW_004457610.1	4983	6092	R	encoded by transcript ACA1_325430A; uncharacterized protein	complement(join(4983..5249,5334..6092))	Acanthamoeba castellanii str. Neff	14922891
ACA1_325440	CDS	ACA1_325440	NW_004457610.1	6451	9316	D	encoded by transcript ACA1_325440A; uncharacterized protein	join(6451..6496,6564..6669,6733..6824,6931..7033,7108..7295,7399..7541,7624..7770,7856..7936,8011..8032,8102..8166,8261..8415,8458..8529,8712..8892,8962..9064,9162..9316)	Acanthamoeba castellanii str. Neff	14922892
ACA1_325450	CDS	ACA1_325450	NW_004457610.1	9619	10649	D	encoded by transcript ACA1_325450A; CBS domain containing protein	join(9619..9939,10011..10649)	Acanthamoeba castellanii str. Neff	14922893
ACA1_325460	CDS	ACA1_325460	NW_004457610.1	10770	13617	R	encoded by transcript ACA1_325460A; tyrosylDNA phosphodiesterase-related, putative	complement(join(10770..10897,10981..11147,11271..11376,11457..11538,11619..11803,11880..12021,12143..12228,12312..12411,12557..12625,12718..12769,12854..13537,13613..13617))	Acanthamoeba castellanii str. Neff	14922894
ACA1_325470	CDS	ACA1_325470	NW_004457610.1	14447	15434	R	encoded by transcript ACA1_325470A; K+ channel tetramerization subfamily protein	complement(join(14447..15007,15186..15434))	Acanthamoeba castellanii str. Neff	14922895
ACA1_325480	CDS	ACA1_325480	NW_004457610.1	17433	18619	D	encoded by transcript ACA1_325480A; RNA recognition motif domain containing protein	join(<17433..17550,17669..17775,17867..18619)	Acanthamoeba castellanii str. Neff	14922896
ACA1_325490	CDS	ACA1_325490	NW_004457610.1	18877	21279	D	encoded by transcript ACA1_325490A; fungal Zn(2)-Cys(6) binuclear cluster domain containing protein	join(18877..19004,19139..19380,19500..20124,20194..20296,20375..20460,20538..20652,20731..20825,21099..21279)	Acanthamoeba castellanii str. Neff	14922897
ACA1_325500	CDS	ACA1_325500	NW_004457610.1	21409	22149	D	encoded by transcript ACA1_325500A; universal stress domain containing protein	join(21409..21457,21543..21736,21873..22000,22080..22149)	Acanthamoeba castellanii str. Neff	14922898
ACA1_325510	CDS	ACA1_325510	NW_004457610.1	22363	23154	D	encoded by transcript ACA1_325510A; actin bundling protein	join(22363..22957,23072..23154)	Acanthamoeba castellanii str. Neff	14922899
ACA1_325520	CDS	ACA1_325520	NW_004457610.1	23762	24443	R	encoded by transcript ACA1_325520A; uncharacterized protein	complement(join(23762..23866,23981..24153,24290..24443))	Acanthamoeba castellanii str. Neff	14922900
ACA1_325530	CDS	ACA1_325530	NW_004457610.1	24748	26890	R	encoded by transcript ACA1_325530A; regulator of chromosome condensation (RCC1) repeat domain containing protein	complement(join(24748..24867,24930..25075,25154..25370,25443..25562,25649..25713,25818..25948,26045..26177,26232..26442,26690..26890))	Acanthamoeba castellanii str. Neff	14922901
ACA1_325540	CDS	ACA1_325540	NW_004457610.1	28135	30660	D	encoded by transcript ACA1_325540A; Tubulin/FtsZ family, GTPase domain containing protein	join(28135..28477,28573..28737,28838..28943,29031..29188,29273..29395,29506..29573,29657..29722,29816..30480,30552..30660)	Acanthamoeba castellanii str. Neff	14922902
ACA1_325550	CDS	ACA1_325550	NW_004457610.1	31386	32440	D	encoded by transcript ACA1_325550A; uncharacterized protein	join(31386..31481,31582..31665,31754..31891,32012..32211,32284..32440)	Acanthamoeba castellanii str. Neff	14922903
ACA1_325560	CDS	ACA1_325560	NW_004457610.1	32900	34593	D	encoded by transcript ACA1_325560A; solute carrier family protein	join(32900..32979,33124..33233,33307..33584,33718..33835,33945..34064,34182..34337,34445..34593)	Acanthamoeba castellanii str. Neff	14922904
ACA1_325570	CDS	ACA1_325570	NW_004457610.1	34963	35715	D	encoded by transcript ACA1_325570A; uncharacterized protein	<34963..35715	Acanthamoeba castellanii str. Neff	14922905
ACA1_325580	CDS	ACA1_325580	NW_004457610.1	35870	38496	R	encoded by transcript ACA1_325580A; GHMP kinase, Nterminal domain containing protein	complement(join(35870..35998,36102..36157,36233..36419,36501..36640,36755..36894,37033..37112,37269..37329,37427..37532,37615..37719,37837..37915,38016..38103,38204..38496))	Acanthamoeba castellanii str. Neff	14922906
ACA1_325590	CDS	ACA1_325590	NW_004457610.1	39133	40613	R	encoded by transcript ACA1_325590A; phosphoglycerate mutase family domain containing protein	complement(join(39133..39458,39721..39870,39950..40192,40349..40613))	Acanthamoeba castellanii str. Neff	14922907
ACA1_325600	CDS	ACA1_325600	NW_004457610.1	41269	45916	R	encoded by transcript ACA1_325600A; protein kinase domain containing protein	complement(join(41269..41367,41475..41655,41722..41784,41864..41970,42068..42202,42304..42449,42539..42687,42770..42852,42960..43183,43288..43830,43968..44244,44323..44401,44477..44846,44934..45103,45184..45299,45449..45683,45771..45916))	Acanthamoeba castellanii str. Neff	14922908
ACA1_325610	CDS	ACA1_325610	NW_004457610.1	49405	54112	R	encoded by transcript ACA1_325610A; protein kinase domain containing protein	complement(join(49405..49458,49644..49830,49908..50077,50182..50432,50510..50556,50644..50712,50793..50866,50974..52119,52238..52316,52396..52640,52734..53058,53115..53468,53562..53732,53832..54112))	Acanthamoeba castellanii str. Neff	14922909
ACA1_325720	CDS	ACA1_325720	NW_004457610.1	57744	59887	D	encoded by transcript ACA1_325720A; pentatricopeptide repeat domain/PPR repeatcontaining protein	join(57744..57867,58085..58252,58513..58655,58796..59492,59589..59887)	Acanthamoeba castellanii str. Neff	14922910
ACA1_325730	CDS	ACA1_325730	NW_004457610.1	60730	63119	D	encoded by transcript ACA1_325730A; kelch repeat protein	join(60730..60793,60885..61034,61131..61283,61384..61536,61647..61802,61882..63119)	Acanthamoeba castellanii str. Neff	14922911
ACA1_325740	CDS	ACA1_325740	NW_004457610.1	63259	64008	R	encoded by transcript ACA1_325740A; uncharacterized protein	complement(join(63259..63596,63696..63809,63960..64008))	Acanthamoeba castellanii str. Neff	14922912
ACA1_325750	CDS	ACA1_325750	NW_004457610.1	64249	65021	R	encoded by transcript ACA1_325750A; uncharacterized protein	complement(join(64249..64554,64692..64798,64973..65021))	Acanthamoeba castellanii str. Neff	14922913
ACA1_325760	CDS	ACA1_325760	NW_004457610.1	66175	66853	R	encoded by transcript ACA1_325760A; uncharacterized protein	complement(join(66175..66515,66583..66693,66805..66853))	Acanthamoeba castellanii str. Neff	14922914
ACA1_325770	CDS	ACA1_325770	NW_004457610.1	67231	67560	R	encoded by transcript ACA1_325770A; mixed lineage kinase (MLTK) related protein	complement(67231..67560)	Acanthamoeba castellanii str. Neff	14922915
ACA1_022560	CDS	ACA1_022560	NW_004457608.1	83	908	R	encoded by transcript ACA1_022560A; uncharacterized protein	complement(join(<83..272,493..660,729..>908))	Acanthamoeba castellanii str. Neff	14922889
ACA1_022670	CDS	ACA1_022670	NW_004457608.1	7576	9275	R	encoded by transcript ACA1_022670A; uncharacterized protein	complement(join(7576..7594,7859..7916,7954..8038,8096..8172,8372..8967,9121..9275))	Acanthamoeba castellanii str. Neff	14922882
ACA1_022680	CDS	ACA1_022680	NW_004457608.1	11843	12733	D	encoded by transcript ACA1_022680A; papain family cysteine protease subfamily protein	join(11843..11882,11949..12142,12212..12733)	Acanthamoeba castellanii str. Neff	14922880
ACA1_022700	CDS	ACA1_022700	NW_004457608.1	16562	24940	R	encoded by transcript ACA1_022700A; Leucine rich repeat containing protein	complement(join(16562..16807,16894..17010,17250..17300,17433..17507,17584..17836,17978..18374,18539..18869,19136..19378,19475..19709,19774..20467,20597..21008,21166..21372,21477..21594,21756..21957,22139..22412,22513..22765,22923..23038,23160..23615,23703..24270,24336..24940))	Acanthamoeba castellanii str. Neff	14922883
ACA1_022710	CDS	ACA1_022710	NW_004457608.1	25616	27871	D	encoded by transcript ACA1_022710A; H(+)-transporting atpase family protein	join(25616..25718,25834..25889,26137..26407,26633..26772,26875..27150,27202..27716,27742..27871)	Acanthamoeba castellanii str. Neff	14922884
ACA1_022720	CDS	ACA1_022720	NW_004457608.1	28849	29486	R	encoded by transcript ACA1_022720A; uncharacterized protein	complement(join(28849..29136,29331..>29486))	Acanthamoeba castellanii str. Neff	14922885
ACA1_022730	CDS	ACA1_022730	NW_004457608.1	29941	30793	R	encoded by transcript ACA1_022730A; cathepsin Blike cysteine proteinase	complement(join(29941..29999,30053..30256,30334..30407,30521..30607,30723..30793))	Acanthamoeba castellanii str. Neff	14922886
ACA1_022850	CDS	ACA1_022850	NW_004457608.1	35793	41369	R	encoded by transcript ACA1_022850A; uncharacterized protein	complement(join(35793..37737,37965..38044,38138..39165,39301..39853,40071..40169,40334..40750,40884..41139,41317..>41369))	Acanthamoeba castellanii str. Neff	14922888
ACA1_348430	CDS	ACA1_348430	NW_004457607.1	320	1773	R	encoded by transcript ACA1_348430A; uncharacterized protein	complement(join(320..572,586..810,831..1321,1336..1773))	Acanthamoeba castellanii str. Neff	14922879
ACA1_348440	CDS	ACA1_348440	NW_004457607.1	1859	2569	D	encoded by transcript ACA1_348440A; uncharacterized protein	join(1859..2171,2237..2519,2530..2569)	Acanthamoeba castellanii str. Neff	14922877
ACA1_348550	CDS	ACA1_348550	NW_004457607.1	9240	9704	D	encoded by transcript ACA1_348550A; uncharacterized protein	9240..9704	Acanthamoeba castellanii str. Neff	14922878
ACA1_045920	CDS	ACA1_045920	NW_004457606.1	202	469	D	encoded by transcript ACA1_045920A; uncharacterized protein	join(202..292,363..>469)	Acanthamoeba castellanii str. Neff	14922876
ACA1_045930	CDS	ACA1_045930	NW_004457606.1	1799	2922	D	encoded by transcript ACA1_045930A; uncharacterized protein	join(1799..2597,2681..2922)	Acanthamoeba castellanii str. Neff	14922811
ACA1_045940	CDS	ACA1_045940	NW_004457606.1	7234	8316	D	encoded by transcript ACA1_045940A; uncharacterized protein	join(7234..7564,7787..8316)	Acanthamoeba castellanii str. Neff	14922812
ACA1_045950	CDS	ACA1_045950	NW_004457606.1	8427	11639	D	encoded by transcript ACA1_045950A; Peptide-aspartate beta-dioxygenase	join(8427..8544,8624..8816,8911..9053,9151..9536,9620..9790,9861..9968,10096..10608,10791..11335,11414..11639)	Acanthamoeba castellanii str. Neff	14922813
ACA1_045960	CDS	ACA1_045960	NW_004457606.1	13624	15956	R	encoded by transcript ACA1_045960A; uncharacterized protein	complement(join(13624..13729,13858..13993,14127..14211,14313..14392,14504..14589,14675..14811,15052..15128,15214..15330,15421..15598,15835..15879,15936..15956))	Acanthamoeba castellanii str. Neff	14922814
ACA1_045970	CDS	ACA1_045970	NW_004457606.1	16143	17789	D	encoded by transcript ACA1_045970A; uncharacterized protein	join(16143..16574,16714..16883,17060..17789)	Acanthamoeba castellanii str. Neff	14922815
ACA1_045980	CDS	ACA1_045980	NW_004457606.1	18556	20455	D	encoded by transcript ACA1_045980A; Ras domain containing protein	join(18556..18696,18800..18846,18970..19085,19218..19381,19448..20455)	Acanthamoeba castellanii str. Neff	14922816
ACA1_045990	CDS	ACA1_045990	NW_004457606.1	20621	22072	R	encoded by transcript ACA1_045990A; Diacylglycerol acyltransferase, putative	complement(join(20621..20899,20980..21172,21249..21339,21403..21522,21588..21713,21823..22072))	Acanthamoeba castellanii str. Neff	14922817
ACA1_046010	CDS	ACA1_046010	NW_004457606.1	28592	31281	D	encoded by transcript ACA1_046010A; uncharacterized protein	join(28592..28924,29080..31281)	Acanthamoeba castellanii str. Neff	14922819
ACA1_046020	CDS	ACA1_046020	NW_004457606.1	31660	32903	R	encoded by transcript ACA1_046020A; uncharacterized protein	complement(join(31660..31776,31899..31964,32045..32121,32206..32263,32380..32511,32597..32734,32862..32903))	Acanthamoeba castellanii str. Neff	14922820
ACA1_046030	CDS	ACA1_046030	NW_004457606.1	33176	33855	R	encoded by transcript ACA1_046030A; Ankyrin repeat containing protein	complement(join(33176..33381,33459..33855))	Acanthamoeba castellanii str. Neff	14922821
ACA1_046040	CDS	ACA1_046040	NW_004457606.1	34696	35063	D	encoded by transcript ACA1_046040A; glutaredoxin family domain, DUF836 protein	join(34696..34818,34929..35063)	Acanthamoeba castellanii str. Neff	14922822
ACA1_046050	CDS	ACA1_046050	NW_004457606.1	35366	36424	R	encoded by transcript ACA1_046050A; LIM domain containing protein	complement(join(35366..35859,36109..36220,36338..36424))	Acanthamoeba castellanii str. Neff	14922823
ACA1_046060	CDS	ACA1_046060	NW_004457606.1	37052	38076	R	encoded by transcript ACA1_046060A; uncharacterized protein	complement(join(37052..37610,37719..37847,37961..38076))	Acanthamoeba castellanii str. Neff	14922824
ACA1_046070	CDS	ACA1_046070	NW_004457606.1	38346	39083	D	encoded by transcript ACA1_046070A; DnaJ domain containing protein	join(38346..38640,38764..39083)	Acanthamoeba castellanii str. Neff	14922825
ACA1_046080	CDS	ACA1_046080	NW_004457606.1	41417	42301	R	encoded by transcript ACA1_046080A; uncharacterized protein	complement(join(41417..41591,41729..41833,41921..42006,42077..42301))	Acanthamoeba castellanii str. Neff	14922826
ACA1_046090	CDS	ACA1_046090	NW_004457606.1	42501	51604	D	encoded by transcript ACA1_046090A; DOCK family protein	join(42501..42914,43149..43293,43429..43529,43733..43836,43962..44133,44232..44396,44549..44647,44727..44855,44959..45078,45180..45253,45359..45479,45562..45747,45879..46013,46107..46238,46311..46456,46546..46778,46944..47140,47223..47389,47531..47609,47724..47840,47946..48107,48222..48254,48425..48679,48733..48930,49006..49152,49243..49422,49536..49622,49739..49870,49954..50094,50196..50370,50477..50622,50863..50970,51166..51260,51360..51498,51569..51604)	Acanthamoeba castellanii str. Neff	14922827
ACA1_046100	CDS	ACA1_046100	NW_004457606.1	52072	53756	D	encoded by transcript ACA1_046100A; uncharacterized protein	join(52072..52762,53201..53337,53388..53488,53618..53756)	Acanthamoeba castellanii str. Neff	14922828
ACA1_046110	CDS	ACA1_046110	NW_004457606.1	53916	54936	D	encoded by transcript ACA1_046110A; uncharacterized protein	join(53916..53973,54066..54222,54330..54421,54713..54936)	Acanthamoeba castellanii str. Neff	14922829
ACA1_046120	CDS	ACA1_046120	NW_004457606.1	55002	56272	R	encoded by transcript ACA1_046120A; uncharacterized protein	complement(join(55002..55319,55419..55485,55588..55645,55766..55835,55948..56107,56199..56272))	Acanthamoeba castellanii str. Neff	14922830
ACA1_046130	CDS	ACA1_046130	NW_004457606.1	56443	58908	D	encoded by transcript ACA1_046130A; cytochrome p450 superfamily protein	join(56443..56472,56620..56655,56880..57011,57100..57288,57376..57545,57657..57753,57875..57934,58031..58140,58234..58361,58480..58526,58594..58908)	Acanthamoeba castellanii str. Neff	14922831
ACA1_046140	CDS	ACA1_046140	NW_004457606.1	58940	60886	R	encoded by transcript ACA1_046140A; uncharacterized protein	complement(join(58940..59348,59581..60289,60305..60413,60426..60759,60867..60886))	Acanthamoeba castellanii str. Neff	14922832
ACA1_046150	CDS	ACA1_046150	NW_004457606.1	61082	63002	R	encoded by transcript ACA1_046150A; cactin, putative	complement(join(61082..61193,61291..63002))	Acanthamoeba castellanii str. Neff	14922833
ACA1_046160	CDS	ACA1_046160	NW_004457606.1	63621	72379	D	encoded by transcript ACA1_046160A; myosin-1, putative	join(63621..63734,63853..63936,64113..64265,64371..64513,64600..64769,64848..64971,65056..65243,65332..65417,65489..65634,65742..65890,66007..66146,66225..66306,66450..66577,66700..66850,66940..67045,67173..67322,67489..67635,67773..67840,68005..68201,68347..68513,68625..68716,68812..68928,69032..69151,69269..69393,69489..69689,69764..69877,69974..70078,70162..70267,70352..70464,70558..70682,70816..70882,71009..71158,71264..71381,71478..71688,71779..72108,72214..72379)	Acanthamoeba castellanii str. Neff	14922834
ACA1_046170	CDS	ACA1_046170	NW_004457606.1	73400	75836	R	encoded by transcript ACA1_046170A; kelch repeat-containing protein	complement(join(73400..73608,73706..73968,74063..74141,74214..74372,74389..74556,74663..75746,75807..75836))	Acanthamoeba castellanii str. Neff	14922835
ACA1_046390	CDS	ACA1_046390	NW_004457606.1	84074	92059	R	encoded by transcript ACA1_046390A; uncharacterized protein	complement(join(84074..84248,84360..84544,84656..84893,85001..85220,85303..85431,85541..85749,85842..86294,86454..87049,87139..87348,87372..88199,88277..88461,88544..89250,89346..89582,89708..89826,89905..89994,90072..90183,90284..90497,90636..90747,90772..90826,90949..91186,91302..91747,91905..92059))	Acanthamoeba castellanii str. Neff	14922837
ACA1_046400	CDS	ACA1_046400	NW_004457606.1	92345	94770	R	encoded by transcript ACA1_046400A; uncharacterized protein	complement(join(92345..92628,92706..92870,92988..93075,93113..93182,93287..93393,93488..93571,93661..93857,93956..94081,94170..94770))	Acanthamoeba castellanii str. Neff	14922838
ACA1_046410	CDS	ACA1_046410	NW_004457606.1	95434	97349	R	encoded by transcript ACA1_046410A; uncharacterized protein	complement(join(95434..95649,95769..95845,95970..96042,96127..96198,96307..96400,96472..96550,96617..96714,96813..96888,96964..97058,97128..97211,97279..97349))	Acanthamoeba castellanii str. Neff	14922839
ACA1_046420	CDS	ACA1_046420	NW_004457606.1	97656	102621	R	encoded by transcript ACA1_046420A; Importin beta domain containing protein	complement(join(97656..97832,97945..98008,98100..98254,98342..98560,98649..98822,98927..99142,99239..99352,99508..99665,99737..99894,100017..100179,100283..100388,100488..100762,100862..101053,101153..101309,101393..101497,101614..101715,102027..102099,102232..102326,102499..102621))	Acanthamoeba castellanii str. Neff	14922840
ACA1_046430	CDS	ACA1_046430	NW_004457606.1	102850	103314	D	encoded by transcript ACA1_046430A; ribosomal protein L20, putative	102850..103314	Acanthamoeba castellanii str. Neff	14922841
ACA1_046440	CDS	ACA1_046440	NW_004457606.1	103460	106603	D	encoded by transcript ACA1_046440A; Fbox domain containing protein	join(103460..103961,104109..104144,104301..104383,104463..104592,104776..104953,105080..105167,105251..105296,105361..105443,105580..105688,105786..105906,105971..106085,106181..106328,106407..106603)	Acanthamoeba castellanii str. Neff	14922842
ACA1_046450	CDS	ACA1_046450	NW_004457606.1	106955	107656	D	encoded by transcript ACA1_046450A; DinB family protein	join(106955..107051,107124..107245,107321..107371,107438..107517,107599..107656)	Acanthamoeba castellanii str. Neff	14922843
ACA1_046460	CDS	ACA1_046460	NW_004457606.1	108156	114367	D	encoded by transcript ACA1_046460A; ABC2 type transporter superfamily protein	join(108156..108275,108348..108642,108798..108947,109030..109518,109585..110003,110078..110248,110322..110441,110516..110635,110837..110966,111043..111321,111401..111762,111873..112070,112157..112307,112388..112531,112627..112749,112842..113065,113148..113247,113388..113526,113612..113856,113979..114136,114251..114367)	Acanthamoeba castellanii str. Neff	14922844
ACA1_046470	CDS	ACA1_046470	NW_004457606.1	115070	117473	D	encoded by transcript ACA1_046470A; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP	join(115070..115276,115434..115544,115639..115935,116018..116093,116163..116362,116522..116606,116700..116897,116985..117306,117395..117473)	Acanthamoeba castellanii str. Neff	14922845
ACA1_046480	CDS	ACA1_046480	NW_004457606.1	117580	121283	R	encoded by transcript ACA1_046480A; DNA methyltransferase dnmt5, putative	complement(join(117580..117923,118021..118237,118354..118490,118646..118752,118884..118959,119052..119090,119104..119302,119404..119471,119625..120464,120555..120765,120855..120950,121020..121283))	Acanthamoeba castellanii str. Neff	14922846
ACA1_046490	CDS	ACA1_046490	NW_004457606.1	122875	124415	R	encoded by transcript ACA1_046490A; iodothyronine deiodinase	complement(join(122875..123034,123148..123278,123356..123412,123501..123552,123577..123719,123809..123904,124023..124166,124281..124415))	Acanthamoeba castellanii str. Neff	14922847
ACA1_046500	CDS	ACA1_046500	NW_004457606.1	124603	125606	R	encoded by transcript ACA1_046500A; uncharacterized protein	complement(join(124603..125049,125156..125234,125250..125359,125430..125606))	Acanthamoeba castellanii str. Neff	14922848
ACA1_046510	CDS	ACA1_046510	NW_004457606.1	125765	129773	R	encoded by transcript ACA1_046510A; uncharacterized protein	complement(join(125765..125992,126151..126201,126281..126371,126491..126624,126717..126862,126991..127104,127380..127548,127656..127742,127867..127950,128050..128678,128873..129035,129130..129214,129306..129451,129521..129566,129640..129773))	Acanthamoeba castellanii str. Neff	14922849
ACA1_046520	CDS	ACA1_046520	NW_004457606.1	129984	132292	D	encoded by transcript ACA1_046520A; uncharacterized protein	join(129984..130182,130280..130326,130404..130618,130726..130815,130932..131391,131529..131817,132081..132292)	Acanthamoeba castellanii str. Neff	14922850
ACA1_046530	CDS	ACA1_046530	NW_004457606.1	133512	135002	D	encoded by transcript ACA1_046530A; oxidoreductase, putative	join(133512..133649,133725..133925,133993..134153,134228..134338,134406..134541,134628..135002)	Acanthamoeba castellanii str. Neff	14922851
ACA1_046540	CDS	ACA1_046540	NW_004457606.1	135101	137264	D	encoded by transcript ACA1_046540A; carrier superfamily protein	join(135101..135292,135423..135509,135581..135631,135740..135898,136001..136174,136300..136413,136560..136691,136810..136995,137085..137264)	Acanthamoeba castellanii str. Neff	14922852
ACA1_046550	CDS	ACA1_046550	NW_004457606.1	137392	140258	R	encoded by transcript ACA1_046550A; ATPase, AAA domain containing protein	complement(join(137392..137530,137627..137894,138000..138298,138397..138500,138619..138858,138979..139101,139280..139453,139533..139641,139740..139801,139941..140258))	Acanthamoeba castellanii str. Neff	14922853
ACA1_046560	CDS	ACA1_046560	NW_004457606.1	140439	142374	R	encoded by transcript ACA1_046560A; regulator of chromosome condensation (RCC1) repeat domain containing protein	complement(join(140439..140585,140683..140894,140974..141331,141640..141849,141970..142109,142191..142253,142323..142374))	Acanthamoeba castellanii str. Neff	14922854
ACA1_046570	CDS	ACA1_046570	NW_004457606.1	142498	145355	D	encoded by transcript ACA1_046570A; transporter, major facilitator subfamily protein	join(142498..142684,142814..142903,143007..143156,143487..143629,143689..143776,143870..144288,144417..144729,144903..145068,145184..145355)	Acanthamoeba castellanii str. Neff	14922855
ACA1_046580	CDS	ACA1_046580	NW_004457606.1	146359	148174	D	encoded by transcript ACA1_046580A; homeobox domain containing protein	join(146359..146734,146871..147828,147949..148174)	Acanthamoeba castellanii str. Neff	14922856
ACA1_046590	CDS	ACA1_046590	NW_004457606.1	148603	149967	D	encoded by transcript ACA1_046590A; enoylCoA hydratase/isomerase, putative	join(148603..148627,148750..148873,148963..149076,149144..149263,149344..149497,149607..149764,149934..149967)	Acanthamoeba castellanii str. Neff	14922857
ACA1_046600	CDS	ACA1_046600	NW_004457606.1	150051	151459	D	encoded by transcript ACA1_046600A; dihydrofolate reductase	join(150051..150154,150231..150265,150345..150389,150482..150576,150656..150731,150803..150912,151001..151061,151172..151296,151403..151459)	Acanthamoeba castellanii str. Neff	14922858
ACA1_046610	CDS	ACA1_046610	NW_004457606.1	151836	152473	D	encoded by transcript ACA1_046610A; uncharacterized protein	join(151836..151905,151983..152473)	Acanthamoeba castellanii str. Neff	14922859
ACA1_046620	CDS	ACA1_046620	NW_004457606.1	153066	153497	D	encoded by transcript ACA1_046620A; uncharacterized protein	join(153066..153257,153357..153497)	Acanthamoeba castellanii str. Neff	14922860
ACA1_046630	CDS	ACA1_046630	NW_004457606.1	153794	155256	R	encoded by transcript ACA1_046630A; ankyrin repeat-containing protein	complement(join(153794..153929,154027..154277,154350..154499,154602..154725,155084..155256))	Acanthamoeba castellanii str. Neff	14922861
ACA1_046640	CDS	ACA1_046640	NW_004457606.1	155343	160765	R	encoded by transcript ACA1_046640A; ankyrin repeat-containing protein	complement(join(155343..155521,155666..155783,155865..155959,156000..156174,156548..156645,156731..156885,156969..157087,157241..157389,157599..157731,157810..157899,158091..158179,158269..158297,158482..158647,158725..158803,158883..158962,159045..159099,159294..159399,159467..159679,159778..159881,159980..160047,160139..160210,160344..160477,160557..160632,160699..160765))	Acanthamoeba castellanii str. Neff	14922862
ACA1_046650	CDS	ACA1_046650	NW_004457606.1	161177	161781	R	encoded by transcript ACA1_046650A; Fbox domain containing protein	complement(join(161177..161448,161550..161781))	Acanthamoeba castellanii str. Neff	14922863
ACA1_046660	CDS	ACA1_046660	NW_004457606.1	161994	167520	D	encoded by transcript ACA1_046660A; valine-tRNA ligase	join(161994..162113,162264..162290,162378..162423,162515..162630,162696..162815,162922..163011,163072..163160,163231..163315,163421..163724,163799..163911,164007..164059,164137..164229,164312..164418,164519..164644,164746..164849,164988..165191,165286..165443,165525..165618,165737..165866,165948..166006,166164..166274,166362..166475,166581..166673,166766..166881,166980..167318,167427..167520)	Acanthamoeba castellanii str. Neff	14922864
ACA1_046670	CDS	ACA1_046670	NW_004457606.1	167609	168247	R	encoded by transcript ACA1_046670A; uncharacterized protein	complement(join(167609..168099,168178..168247))	Acanthamoeba castellanii str. Neff	14922865
ACA1_046680	CDS	ACA1_046680	NW_004457606.1	168613	169585	R	encoded by transcript ACA1_046680A; uncharacterized protein	complement(join(168613..168821,168884..168962,169049..169141,169172..169296,169383..169434,169550..169585))	Acanthamoeba castellanii str. Neff	14922866
ACA1_046690	CDS	ACA1_046690	NW_004457606.1	170202	171651	D	encoded by transcript ACA1_046690A; uncharacterized protein	join(170202..170249,170348..170629,170764..170873,170962..171016,171096..171351,171479..171651)	Acanthamoeba castellanii str. Neff	14922867
ACA1_046700	CDS	ACA1_046700	NW_004457606.1	171861	172779	D	encoded by transcript ACA1_046700A; translocase of inner mitochondrial membrane 17, putative	join(171861..171986,172132..172318,172415..172779)	Acanthamoeba castellanii str. Neff	14922868
ACA1_046710	CDS	ACA1_046710	NW_004457606.1	172876	173747	R	encoded by transcript ACA1_046710A; cytoplasmic protein, putative	complement(join(172876..173156,173411..173747))	Acanthamoeba castellanii str. Neff	14922869
ACA1_046720	CDS	ACA1_046720	NW_004457606.1	174072	174583	D	encoded by transcript ACA1_046720A; uncharacterized protein	join(174072..174252,174310..174437,174518..174583)	Acanthamoeba castellanii str. Neff	14922870
ACA1_046730	CDS	ACA1_046730	NW_004457606.1	174714	178289	R	encoded by transcript ACA1_046730A; SPRY domain containing protein	complement(join(174714..174833,174903..174976,175061..175120,175237..175345,175427..175479,175549..175640,175767..175860,176020..176185,176281..176460,176547..176672,176742..177092,177210..177328,177396..177455,177538..177613,177749..177883,177977..178009,178104..178141,178232..178289))	Acanthamoeba castellanii str. Neff	14922871
ACA1_046740	CDS	ACA1_046740	NW_004457606.1	179316	181600	R	encoded by transcript ACA1_046740A; Transmembrane amino acid transporter, putative	complement(join(179316..179385,179463..179599,179674..179763,179862..179971,180039..180211,180301..180412,180491..180576,180663..180798,180893..181076,181157..181600))	Acanthamoeba castellanii str. Neff	14922872
ACA1_046850	CDS	ACA1_046850	NW_004457606.1	184074	184993	R	encoded by transcript ACA1_046850A; OTU family cysteine protease	complement(join(184074..184122,184196..184373,184458..184541,184603..184676,184764..184993))	Acanthamoeba castellanii str. Neff	14922873
ACA1_046860	CDS	ACA1_046860	NW_004457606.1	185798	187042	D	encoded by transcript ACA1_046860A; uncharacterized protein	join(185798..185855,185937..186030,186139..186198,186293..186369,186439..186516,186590..186681,186723..186864,186945..187042)	Acanthamoeba castellanii str. Neff	14922874
ACA1_046870	CDS	ACA1_046870	NW_004457606.1	187147	191932	R	encoded by transcript ACA1_046870A; BTB/POZ domain containing protein	complement(join(187147..187286,187391..187509,187597..187735,187842..187972,188067..188184,188339..188456,188614..188778,188840..188939,189024..189105,189323..190428,190538..190643,190715..190801,190896..191049,191115..191184,191255..191347,191426..191535,191607..191708,191789..>191932))	Acanthamoeba castellanii str. Neff	14922875
ACA1_007720	CDS	ACA1_007720	NW_004457604.1	56	486	D	encoded by transcript ACA1_007720A; uncharacterized protein	join(56..112,196..300,424..486)	Acanthamoeba castellanii str. Neff	14922809
ACA1_007730	CDS	ACA1_007730	NW_004457604.1	716	4652	D	encoded by transcript ACA1_007730A; DOMON domain containing protein	join(716..800,883..970,1047..1104,1160..1250,1333..1441,1535..1583,1742..1855,1924..2023,2122..2238,2352..2442,2603..2670,2762..2850,2928..3002,3079..3215,3344..3501,3654..3740,3852..3982,4093..4293,4396..4500,4593..4652)	Acanthamoeba castellanii str. Neff	14922810
ACA1_007740	CDS	ACA1_007740	NW_004457604.1	4822	10421	R	encoded by transcript ACA1_007740A; RasGEF domain containing protein	complement(join(4822..5127,5150..5829,5923..6053,6209..6316,6446..6537,6635..6777,6865..6994,7071..7163,7252..7341,7436..7554,7644..7782,7844..7912,8019..8118,8220..8345,8465..8958,9118..9234,9335..9483,9784..9929,10345..10421))	Acanthamoeba castellanii str. Neff	14922804
ACA1_007750	CDS	ACA1_007750	NW_004457604.1	10988	19803	D	encoded by transcript ACA1_007750A; protein kinase domain containing protein	join(10988..11052,11158..12090,12213..12396,12497..12673,12739..12768,12981..13151,13408..13475,13631..13731,13821..13951,14048..14116,14208..14291,14371..14421,14508..14673,14809..14954,15046..15170,15183..15857,16013..16091,16181..17890,17956..18027,18138..18248,18340..18429,18532..18621,18713..18781,18855..19220,19312..19371,19510..19803)	Acanthamoeba castellanii str. Neff	14922805
ACA1_007760	CDS	ACA1_007760	NW_004457604.1	20490	26476	D	encoded by transcript ACA1_007760A; PH domain containing protein	join(20490..20861,20943..21015,21122..21201,21296..21352,21464..21649,21713..21811,21878..22033,22139..22233,22325..22432,22550..22609,22683..22777,22850..22921,23058..23146,23234..23322,23423..23510,23603..23697,23791..23869,23969..24085,24183..24980,25070..25316,25568..26106,26183..26311,26399..26476)	Acanthamoeba castellanii str. Neff	14922801
ACA1_007770	CDS	ACA1_007770	NW_004457604.1	26912	27508	D	encoded by transcript ACA1_007770A; GTPase cRac1B, putative	26912..27508	Acanthamoeba castellanii str. Neff	14922802
ACA1_007780	CDS	ACA1_007780	NW_004457604.1	28059	28635	D	encoded by transcript ACA1_007780A; Vtype ATPase, G subunit	join(28059..28143,28310..28410,28489..28635)	Acanthamoeba castellanii str. Neff	14922803
ACA1_007790	CDS	ACA1_007790	NW_004457604.1	28800	30356	R	encoded by transcript ACA1_007790A; peptidase, S54 (rhomboid) subfamily protein	complement(join(28800..28838,28922..29180,29225..29351,29443..29567,29683..29906,29996..30069,30176..30356))	Acanthamoeba castellanii str. Neff	14922806
ACA1_007800	CDS	ACA1_007800	NW_004457604.1	30802	32623	R	encoded by transcript ACA1_007800A; uncharacterized protein	complement(join(30802..31155,31317..31412,31533..31646,31713..31781,31893..31975,32054..32146,32217..32418,32495..32623))	Acanthamoeba castellanii str. Neff	14922807
ACA1_007810	CDS	ACA1_007810	NW_004457604.1	33132	33461	R	encoded by transcript ACA1_007810A; uncharacterized protein	complement(33132..33461)	Acanthamoeba castellanii str. Neff	14922808
ACA1_337160	CDS	ACA1_337160	NW_004457603.1	37	538	D	encoded by transcript ACA1_337160A; oxidoreductase domain containing protein	join(<37..140,194..306,405..538)	Acanthamoeba castellanii str. Neff	14922800
ACA1_337170	CDS	ACA1_337170	NW_004457603.1	644	1586	D	encoded by transcript ACA1_337170A; uncharacterized protein	join(644..890,971..1499,1565..1586)	Acanthamoeba castellanii str. Neff	14922792
ACA1_337280	CDS	ACA1_337280	NW_004457603.1	4380	4946	D	encoded by transcript ACA1_337280A; uncharacterized protein	4380..4946	Acanthamoeba castellanii str. Neff	14922793
ACA1_337290	CDS	ACA1_337290	NW_004457603.1	5104	6577	R	encoded by transcript ACA1_337290A; serpin (serine proteinase inhibitor) superfamily protein	complement(join(5104..5335,5404..5615,5687..5972,6051..6256,6332..6577))	Acanthamoeba castellanii str. Neff	14922794
ACA1_337300	CDS	ACA1_337300	NW_004457603.1	7365	8122	D	encoded by transcript ACA1_337300A; uncharacterized protein	join(7365..7581,7635..7798,7826..8122)	Acanthamoeba castellanii str. Neff	14922795
ACA1_337310	CDS	ACA1_337310	NW_004457603.1	8655	9020	D	encoded by transcript ACA1_337310A; uncharacterized protein	8655..9020	Acanthamoeba castellanii str. Neff	14922796
ACA1_337320	CDS	ACA1_337320	NW_004457603.1	9340	10191	D	encoded by transcript ACA1_337320A; pol polyprotein	join(9340..9550,9625..9692,9801..9921,10040..10191)	Acanthamoeba castellanii str. Neff	14922797
ACA1_337330	CDS	ACA1_337330	NW_004457603.1	10493	10672	R	encoded by transcript ACA1_337330A; uncharacterized protein	complement(join(10493..10633,10655..10672))	Acanthamoeba castellanii str. Neff	14922798
ACA1_029510	CDS	ACA1_029510	NW_004457602.1	124	1992	R	encoded by transcript ACA1_029510A; leucine rich repeat containing protein	complement(join(<124..339,435..530,633..871,951..1069,1170..1318,1465..1511,1616..1711,1830..1992))	Acanthamoeba castellanii str. Neff	14922790
ACA1_029520	CDS	ACA1_029520	NW_004457602.1	2255	3043	D	encoded by transcript ACA1_029520A; uncharacterized protein	join(2255..2619,2734..3043)	Acanthamoeba castellanii str. Neff	14922791
ACA1_029530	CDS	ACA1_029530	NW_004457602.1	4860	5650	D	encoded by transcript ACA1_029530A; uncharacterized protein	join(4860..5218,5338..5418,5452..5650)	Acanthamoeba castellanii str. Neff	14922788
ACA1_029640	CDS	ACA1_029640	NW_004457602.1	9127	11773	R	encoded by transcript ACA1_029640A; SNF2 family Nterminal domain containing protein	complement(join(9127..9132,9198..9393,9460..9539,9618..9773,9842..10209,10291..10379,10460..10578,10650..10989,11116..11177,11302..11549,11650..>11773))	Acanthamoeba castellanii str. Neff	14922789
ACA1_017430	CDS	ACA1_017430	NW_004457601.1	487	3321	D	encoded by transcript ACA1_017430A; integrator complex subunit 9, putative	join(<487..609,765..854,929..999,1111..1199,1348..1443,3024..3074,3155..>3321)	Acanthamoeba castellanii str. Neff	14922787
ACA1_017540	CDS	ACA1_017540	NW_004457601.1	3422	10683	R	encoded by transcript ACA1_017540A; uncharacterized protein	complement(join(3422..3516,3616..4121,9522..9614,9625..9740,9817..9915,10009..10683))	Acanthamoeba castellanii str. Neff	14922786
ACA1_343130	CDS	ACA1_343130	NW_004457599.1	710	1296	D	encoded by transcript ACA1_343130A; uncharacterized protein	join(710..781,889..1296)	Acanthamoeba castellanii str. Neff	14922785
ACA1_343140	CDS	ACA1_343140	NW_004457599.1	1421	2919	R	encoded by transcript ACA1_343140A; nitrilase, putative	complement(join(1421..1565,1657..1724,1815..1909,1997..2071,2252..2345,2404..2498,2582..2705,2815..2919))	Acanthamoeba castellanii str. Neff	14922782
ACA1_343150	CDS	ACA1_343150	NW_004457599.1	3164	4358	D	encoded by transcript ACA1_343150A; uncharacterized protein	join(<3164..3491,3579..3839,3877..4358)	Acanthamoeba castellanii str. Neff	14922783
ACA1_343160	CDS	ACA1_343160	NW_004457599.1	7186	7665	D	encoded by transcript ACA1_343160A; helicase associated domain containing protein	join(7186..7343,7419..7665)	Acanthamoeba castellanii str. Neff	14922780
ACA1_343170	CDS	ACA1_343170	NW_004457599.1	8040	10721	R	encoded by transcript ACA1_343170A; uncharacterized protein	complement(join(8040..8367,8529..8661,8784..8913,9071..9171,9275..9362,9456..9506,9606..9863,9933..9999,10087..10468,10538..10721))	Acanthamoeba castellanii str. Neff	14922781
ACA1_343180	CDS	ACA1_343180	NW_004457599.1	11880	13690	R	encoded by transcript ACA1_343180A; RNA polymerase Rpb3/Rpb11 dimerization domain containing protein	complement(join(11880..11998,12088..12198,12270..12370,12463..12545,12626..12741,12847..12960,13050..13371,13604..13690))	Acanthamoeba castellanii str. Neff	14922784
ACA1_343290	CDS	ACA1_343290	NW_004457599.1	15192	15951	D	encoded by transcript ACA1_343290A; uncharacterized protein	join(15192..15395,15454..15622,15700..15834,15923..15951)	Acanthamoeba castellanii str. Neff	14922779
ACA1_343300	CDS	ACA1_343300	NW_004457599.1	16064	20978	R	encoded by transcript ACA1_343300A; NFX1 type zinc finger domain containing protein	complement(join(16064..16152,16229..16729,16836..17018,17110..17201,17285..17466,17537..17696,17768..17853,17924..18014,18113..18234,18323..18404,18474..18541,18621..18695,18768..18836,18922..19072,19149..19258,19346..19446,19527..19593,19674..19722,19802..19861,19947..20122,20192..20271,20333..20412,20485..20978))	Acanthamoeba castellanii str. Neff	14922775
ACA1_343310	CDS	ACA1_343310	NW_004457599.1	21171	23996	R	encoded by transcript ACA1_343310A; NADH dehydrogenase, extrinsic, putative	complement(join(21171..21316,21389..21512,21589..21601,21775..21920,21994..22152,22235..22326,22413..22529,22608..22646,22915..23007,23079..23188,23273..23405,23506..23565,23681..23739,23845..23996))	Acanthamoeba castellanii str. Neff	14922776
ACA1_343620	CDS	ACA1_343620	NW_004457599.1	26405	27008	R	encoded by transcript ACA1_343620A; endonuclease III, putative	complement(join(<26405..26537,26625..26719,26781..26867,26937..27008))	Acanthamoeba castellanii str. Neff	14922777
ACA1_343730	CDS	ACA1_343730	NW_004457599.1	28774	31096	D	encoded by transcript ACA1_343730A; uncharacterized protein	join(28774..28895,28973..29071,29151..29282,30503..30718,30801..>31096)	Acanthamoeba castellanii str. Neff	14922778
ACA1_384000	CDS	ACA1_384000	NW_004457598.1	222	1757	D	encoded by transcript ACA1_384000A; Dihydrouridine synthase (Dus)	join(222..427,517..823,934..1003,1101..1312,1401..1566,1654..1757)	Acanthamoeba castellanii str. Neff	14922774
ACA1_384010	CDS	ACA1_384010	NW_004457598.1	2753	5332	R	encoded by transcript ACA1_384010A; Arf GTPase activating protein	complement(join(2753..2803,2871..2950,3031..3079,3177..3241,3318..3407,3485..3615,3683..3739,3891..3978,4072..4169,4251..4316,4399..4527,4622..4738,4838..4921,4991..5109,5252..5332))	Acanthamoeba castellanii str. Neff	14922612
ACA1_384020	CDS	ACA1_384020	NW_004457598.1	5789	6226	D	encoded by transcript ACA1_384020A; uncharacterized protein	join(5789..5946,6079..6226)	Acanthamoeba castellanii str. Neff	14922613
ACA1_384030	CDS	ACA1_384030	NW_004457598.1	6567	8153	D	encoded by transcript ACA1_384030A; uncharacterized protein	join(6567..6682,6801..6938,7049..7262,7331..7451,7541..7632,7710..8153)	Acanthamoeba castellanii str. Neff	14922614
ACA1_384040	CDS	ACA1_384040	NW_004457598.1	8486	10590	R	encoded by transcript ACA1_384040A; uncharacterized protein	complement(join(8486..8655,8779..8834,8925..8989,9084..9167,9252..9317,9396..9449,9548..9610,9708..9770,9848..9909,9992..10038,10158..10273,10483..10590))	Acanthamoeba castellanii str. Neff	14922615
ACA1_384050	CDS	ACA1_384050	NW_004457598.1	10955	11693	D	encoded by transcript ACA1_384050A; uncharacterized protein	join(10955..11062,11166..11201,11317..11492,11588..11693)	Acanthamoeba castellanii str. Neff	14922616
ACA1_384060	CDS	ACA1_384060	NW_004457598.1	11762	12198	D	encoded by transcript ACA1_384060A; uncharacterized protein	join(11762..11992,12055..12198)	Acanthamoeba castellanii str. Neff	14922607
ACA1_384070	CDS	ACA1_384070	NW_004457598.1	12440	15676	D	encoded by transcript ACA1_384070A; Sel1 repeatcontaining protein	join(12440..12827,12937..13995,14087..14167,14273..14386,14492..14571,14678..15676)	Acanthamoeba castellanii str. Neff	14922608
ACA1_384080	CDS	ACA1_384080	NW_004457598.1	15741	16292	R	encoded by transcript ACA1_384080A; PLAC8 family protein	complement(join(15741..15848,15943..16145,16283..16292))	Acanthamoeba castellanii str. Neff	14922609
ACA1_384090	CDS	ACA1_384090	NW_004457598.1	17657	19373	R	encoded by transcript ACA1_384090A; GDSLlike lipase/acylhydrolase domain containing protein	complement(join(17657..17722,17785..17872,17987..18116,18215..18287,18371..18560,18667..18925,19001..19134,19222..19373))	Acanthamoeba castellanii str. Neff	14922610
ACA1_384100	CDS	ACA1_384100	NW_004457598.1	19582	20806	R	encoded by transcript ACA1_384100A; glycosyl hydrolase	complement(join(19582..19732,19841..20017,20088..20163,20304..20369,20465..20510,20663..20806))	Acanthamoeba castellanii str. Neff	14922611
ACA1_384210	CDS	ACA1_384210	NW_004457598.1	21552	22249	R	encoded by transcript ACA1_384210A; uncharacterized protein	complement(join(21552..21665,21725..21915,21993..22057,22176..>22249))	Acanthamoeba castellanii str. Neff	14922617
ACA1_384320	CDS	ACA1_384320	NW_004457598.1	23821	27260	D	encoded by transcript ACA1_384320A; glycosyl hydrolases family 25 subfamily protein	join(23821..23916,24004..24112,24183..24372,24444..24572,24684..24806,25132..25228,25391..25689,25760..25888,25979..26101,26382..26487,26558..26856,26927..27055,27128..27260)	Acanthamoeba castellanii str. Neff	14922618
ACA1_384330	CDS	ACA1_384330	NW_004457598.1	27382	28802	D	encoded by transcript ACA1_384330A; uncharacterized protein	join(27382..27746,27813..27868,27946..28021,28120..28163,28241..28328,28399..28458,28545..28600,28705..28802)	Acanthamoeba castellanii str. Neff	14922619
ACA1_384340	CDS	ACA1_384340	NW_004457598.1	29022	30447	D	encoded by transcript ACA1_384340A; Ras subfamily protein	join(29022..29119,29424..29529,29599..29670,29992..30081,30120..30229,30300..30447)	Acanthamoeba castellanii str. Neff	14922620
ACA1_384350	CDS	ACA1_384350	NW_004457598.1	30811	32310	D	encoded by transcript ACA1_384350A; RNA recognition motif domain containing protein	join(30811..31061,31134..31234,31302..31406,31481..31621,31724..31782,31868..32110,32185..32310)	Acanthamoeba castellanii str. Neff	14922621
ACA1_384360	CDS	ACA1_384360	NW_004457598.1	32532	33281	R	encoded by transcript ACA1_384360A; signal recognition particle, putative	complement(join(32532..32661,32737..32826,32914..32995,33185..33281))	Acanthamoeba castellanii str. Neff	14922622
ACA1_384370	CDS	ACA1_384370	NW_004457598.1	33448	34035	R	encoded by transcript ACA1_384370A; cell division control protein 42, putative	complement(33448..34035)	Acanthamoeba castellanii str. Neff	14922623
ACA1_384380	CDS	ACA1_384380	NW_004457598.1	34463	35630	D	encoded by transcript ACA1_384380A; uncharacterized protein	join(34463..34506,34646..34696,34799..34894,34998..35070,35295..35394,35482..35630)	Acanthamoeba castellanii str. Neff	14922624
ACA1_384400	CDS	ACA1_384400	NW_004457598.1	36718	38508	R	encoded by transcript ACA1_384400A; GDSLlike lipase/acylhydrolase domain containing protein	complement(join(36718..36842,36937..37111,37435..37511,37606..37758,37889..37965,38038..38161,38289..38508))	Acanthamoeba castellanii str. Neff	14922626
ACA1_384510	CDS	ACA1_384510	NW_004457598.1	38722	39320	R	encoded by transcript ACA1_384510A; endoplasmic reticulum UDPGlc/UDP-Gal transporter, putative	complement(join(38722..38985,39086..39167,39229..39320))	Acanthamoeba castellanii str. Neff	14922627
ACA1_384520	CDS	ACA1_384520	NW_004457598.1	39422	40669	R	encoded by transcript ACA1_384520A; UAA transporter family protein	complement(join(39422..39553,39624..39699,39804..39865,39992..40072,40214..40275,40367..40464,40587..40669))	Acanthamoeba castellanii str. Neff	14922628
ACA1_384530	CDS	ACA1_384530	NW_004457598.1	41006	42715	D	encoded by transcript ACA1_384530A; uncharacterized protein	join(41006..41067,41132..41167,41290..41484,41592..41638,41785..41903,41991..42455,42557..42715)	Acanthamoeba castellanii str. Neff	14922629
ACA1_384550	CDS	ACA1_384550	NW_004457598.1	44788	46165	D	encoded by transcript ACA1_384550A; GTPase, putative	join(44788..44824,45146..45267,45393..45482,45629..45806,45909..46000,46073..46165)	Acanthamoeba castellanii str. Neff	14922631
ACA1_384560	CDS	ACA1_384560	NW_004457598.1	46775	49902	D	encoded by transcript ACA1_384560A; ATPase/histidine kinase/DNA gyrase B/HSP90 domain containing protein	join(46775..46787,46832..47028,47057..47789,47895..48166,48247..48316,48448..48593,48690..49106,49147..49572,49660..49902)	Acanthamoeba castellanii str. Neff	14922632
ACA1_384570	CDS	ACA1_384570	NW_004457598.1	50211	54700	R	encoded by transcript ACA1_384570A; gelsolin repeat-containing protein	complement(join(50211..50291,50403..50614,50718..50880,51024..51349,51428..51642,51783..51920,52007..52183,52261..52360,52518..52661,52779..52920,53013..53148,53287..53394,53485..53662,53782..53853,53938..54349,54464..>54700))	Acanthamoeba castellanii str. Neff	14922633
ACA1_384580	CDS	ACA1_384580	NW_004457598.1	54814	58546	R	encoded by transcript ACA1_384580A; uncharacterized protein	complement(join(<54814..55350,55440..55587,55659..55750,55836..56105,56289..56656,56737..56887,56982..57632,57757..57857,57970..58321,58484..58546))	Acanthamoeba castellanii str. Neff	14922634
ACA1_384590	CDS	ACA1_384590	NW_004457598.1	59538	60872	R	encoded by transcript ACA1_384590A; RAB1B, member RAS oncogene family	complement(join(59538..59547,59636..59739,59810..59863,59961..60038,60121..60196,60321..60340,60421..60468,60573..60667,60761..60872))	Acanthamoeba castellanii str. Neff	14922635
ACA1_384600	CDS	ACA1_384600	NW_004457598.1	61335	63297	R	encoded by transcript ACA1_384600A; uncharacterized protein	complement(join(61335..61480,61552..61639,61723..61769,61848..62341,62440..62654,62743..62928,63025..63297))	Acanthamoeba castellanii str. Neff	14922636
ACA1_384610	CDS	ACA1_384610	NW_004457598.1	64280	65800	R	encoded by transcript ACA1_384610A; uncharacterized protein	complement(64280..65800)	Acanthamoeba castellanii str. Neff	14922637
ACA1_384620	CDS	ACA1_384620	NW_004457598.1	66048	68084	R	encoded by transcript ACA1_384620A; Fbox domain containing protein	complement(join(66048..66386,66467..66549,66632..66795,66868..66995,67103..67222,67257..67285,67359..67423,67499..67573,67666..67766,67839..67950,68056..68084))	Acanthamoeba castellanii str. Neff	14922638
ACA1_384630	CDS	ACA1_384630	NW_004457598.1	68522	71006	R	encoded by transcript ACA1_384630A; Short/branched chain specific acylCoA dehydrogenase, mitochondrial, putative	complement(join(68522..68583,68675..68754,68827..68931,69041..69121,69192..69405,69481..69558,69662..69727,69802..69887,69968..70071,70170..70288,70388..70443,70534..70592,70688..70732,70908..71006))	Acanthamoeba castellanii str. Neff	14922639
ACA1_384640	CDS	ACA1_384640	NW_004457598.1	71291	76294	R	encoded by transcript ACA1_384640A; RasGEF domain containing protein	complement(join(71291..71389,71490..71694,71772..71888,71955..72052,72144..72237,72312..72443,72550..72671,72756..72890,72981..73025,73206..73239,73332..73463,73563..73624,73740..73794,73887..74008,74171..74299,74411..74545,74634..74743,74855..74938,75075..75219,75335..75586,75770..76294))	Acanthamoeba castellanii str. Neff	14922640
ACA1_384650	CDS	ACA1_384650	NW_004457598.1	76881	78432	R	encoded by transcript ACA1_384650A; rieske [2fe2s] domain protein	complement(join(76881..76897,76990..77092,77136..77207,77287..77381,77455..77530,77624..77689,77760..77840,77936..77962,78042..78157,78185..78209,78325..78432))	Acanthamoeba castellanii str. Neff	14922641
ACA1_384660	CDS	ACA1_384660	NW_004457598.1	78591	79943	D	encoded by transcript ACA1_384660A; retinoblastoma binding protein 4 variant isoform 1, putative	join(78591..79574,79668..79943)	Acanthamoeba castellanii str. Neff	14922642
ACA1_384670	CDS	ACA1_384670	NW_004457598.1	80317	80895	D	encoded by transcript ACA1_384670A; uncharacterized protein	join(80317..80389,80543..80895)	Acanthamoeba castellanii str. Neff	14922643
ACA1_384680	CDS	ACA1_384680	NW_004457598.1	81532	82075	R	encoded by transcript ACA1_384680A; uncharacterized protein	complement(join(81532..81616,81728..81824,81961..82075))	Acanthamoeba castellanii str. Neff	14922644
ACA1_384690	CDS	ACA1_384690	NW_004457598.1	82702	86006	R	encoded by transcript ACA1_384690A; glycogen phosphorylase 1, putative	complement(join(82702..83682,83811..85209,85301..85418,85850..86006))	Acanthamoeba castellanii str. Neff	14922645
ACA1_384700	CDS	ACA1_384700	NW_004457598.1	87393	90014	D	encoded by transcript ACA1_384700A; transporter, major facilitator subfamily protein	join(87393..87416,87513..87824,87888..87994,88072..88211,88302..88446,88524..88713,88816..88944,89034..89131,89229..89430,89578..89677,89733..89816,89902..90014)	Acanthamoeba castellanii str. Neff	14922646
ACA1_384710	CDS	ACA1_384710	NW_004457598.1	90181	92188	D	encoded by transcript ACA1_384710A; transmembrane receptor family protein	join(90181..90342,90480..90624,90742..91416,91490..91658,91744..92188)	Acanthamoeba castellanii str. Neff	14922647
ACA1_384720	CDS	ACA1_384720	NW_004457598.1	92427	92912	D	encoded by transcript ACA1_384720A; major vault protein	join(92427..92534,92609..92713,92808..92912)	Acanthamoeba castellanii str. Neff	14922648
ACA1_384740	CDS	ACA1_384740	NW_004457598.1	93731	95894	R	encoded by transcript ACA1_384740A; uncharacterized protein	complement(join(93731..93891,93986..95894))	Acanthamoeba castellanii str. Neff	14922650
ACA1_384750	CDS	ACA1_384750	NW_004457598.1	95996	97050	R	encoded by transcript ACA1_384750A; SH3 domain containing protein	complement(join(95996..96122,96212..96442,96466..96479,96625..97050))	Acanthamoeba castellanii str. Neff	14922651
ACA1_384760	CDS	ACA1_384760	NW_004457598.1	97647	98797	R	encoded by transcript ACA1_384760A; EF hand domain containing protein	complement(join(97647..97771,97880..97992,98076..98121,98204..98265,98380..98461,98728..98797))	Acanthamoeba castellanii str. Neff	14922652
ACA1_384770	CDS	ACA1_384770	NW_004457598.1	99300	99869	D	encoded by transcript ACA1_384770A; uncharacterized protein	join(99300..99378,99512..99531,99771..99869)	Acanthamoeba castellanii str. Neff	14922653
ACA1_384780	CDS	ACA1_384780	NW_004457598.1	100121	102670	D	encoded by transcript ACA1_384780A; MIT domain containing protein	join(100121..100259,100447..100963,101073..101287,101346..101879,101988..102157,102298..102465,102563..102670)	Acanthamoeba castellanii str. Neff	14922654
ACA1_384790	CDS	ACA1_384790	NW_004457598.1	102847	105246	R	encoded by transcript ACA1_384790A; cellulase (glycosyl hydrolase family 5) subfamily protein	complement(join(102847..102979,103055..103407,103506..103663,103751..103919,103996..104175,104264..104392,104502..104669,104777..104882,105044..105246))	Acanthamoeba castellanii str. Neff	14922655
ACA1_384800	CDS	ACA1_384800	NW_004457598.1	105406	107900	D	encoded by transcript ACA1_384800A; uncharacterized protein	join(105406..105544,105636..105796,105902..106006,106109..106158,106258..106349,106462..106542,106625..106751,106883..107000,107159..107236,107336..107483,107549..107650,107734..107900)	Acanthamoeba castellanii str. Neff	14922656
ACA1_384810	CDS	ACA1_384810	NW_004457598.1	107959	108899	R	encoded by transcript ACA1_384810A; uncharacterized protein	complement(join(107959..108259,108384..108695,108728..108825,108858..108899))	Acanthamoeba castellanii str. Neff	14922657
ACA1_384820	CDS	ACA1_384820	NW_004457598.1	109079	110306	D	encoded by transcript ACA1_384820A; uncharacterized protein	join(109079..109467,109540..109702,109768..110168,110222..110306)	Acanthamoeba castellanii str. Neff	14922658
ACA1_384830	CDS	ACA1_384830	NW_004457598.1	110679	111793	R	encoded by transcript ACA1_384830A; Raslike protein 1, putative	complement(join(110679..110795,110901..111109,111226..111352,111422..111444,111763..111793))	Acanthamoeba castellanii str. Neff	14922659
ACA1_384840	CDS	ACA1_384840	NW_004457598.1	112569	114633	R	encoded by transcript ACA1_384840A; 3hydroxyacyl-CoA dehydrogenase	complement(join(112569..112618,112731..112813,112907..113019,113106..113208,113555..113764,113924..114089,114175..114319,114445..114489,114568..114633))	Acanthamoeba castellanii str. Neff	14922660
ACA1_384850	CDS	ACA1_384850	NW_004457598.1	114856	116489	R	encoded by transcript ACA1_384850A; arrestin (or santigen), n-terminal domain containing protein	complement(join(114856..115091,115198..115291,115367..115465,115564..115706,115817..115947,116057..116234,116342..116489))	Acanthamoeba castellanii str. Neff	14922661
ACA1_384860	CDS	ACA1_384860	NW_004457598.1	116887	117786	D	encoded by transcript ACA1_384860A; isochorismatase hydrolase	join(116887..117117,117184..117276,117366..117424,117504..117596,117696..117786)	Acanthamoeba castellanii str. Neff	14922662
ACA1_384870	CDS	ACA1_384870	NW_004457598.1	118228	128938	D	encoded by transcript ACA1_384870A; protein kinase domain containing protein	join(118228..118851,118975..119119,119192..119422,119503..119627,119711..119783,119852..120477,120616..120945,120960..121137,121209..121611,121679..121840,121915..122040,122130..122293,122391..122502,122596..122708,122795..122909,122995..123073,123135..124832,124901..125241,125368..125572,125652..125761,125823..125930,126013..126136,126220..126472,126584..126947,127043..127155,127221..127313,127389..127561,127635..127760,127867..128026,128097..128421,128512..128938)	Acanthamoeba castellanii str. Neff	14922663
ACA1_384880	CDS	ACA1_384880	NW_004457598.1	129978	130917	D	encoded by transcript ACA1_384880A; CobW/P47K family domain containing protein	join(129978..130026,130102..130217,130312..130547,130686..130917)	Acanthamoeba castellanii str. Neff	14922664
ACA1_384990	CDS	ACA1_384990	NW_004457598.1	131403	132910	D	encoded by transcript ACA1_384990A; CobW/P47K Cterminal domain containing protein	join(131403..131420,131771..131950,132022..132564,132713..132910)	Acanthamoeba castellanii str. Neff	14922665
ACA1_385100	CDS	ACA1_385100	NW_004457598.1	133726	135589	R	encoded by transcript ACA1_385100A; metal cation transporter, ZIP subfamily protein	complement(join(133726..133825,133911..134052,134251..134403,134488..134613,134683..134848,134982..135163,135261..135423,135515..135589))	Acanthamoeba castellanii str. Neff	14922666
ACA1_385110	CDS	ACA1_385110	NW_004457598.1	135739	136327	R	encoded by transcript ACA1_385110A; uncharacterized protein	complement(join(135739..136057,136173..136327))	Acanthamoeba castellanii str. Neff	14922667
ACA1_385120	CDS	ACA1_385120	NW_004457598.1	137330	139711	D	encoded by transcript ACA1_385120A; RAC family serine/threonineprotein kinase, putative	join(137330..137428,137561..137611,137716..137817,137906..138067,138156..138240,138310..138463,138544..138677,138749..138837,138940..139047,139133..139183,139272..139349,139445..139519,139637..139711)	Acanthamoeba castellanii str. Neff	14922668
ACA1_385130	CDS	ACA1_385130	NW_004457598.1	139876	141096	R	encoded by transcript ACA1_385130A; uncharacterized protein	complement(join(139876..140147,140251..140417,140508..140844,140952..141096))	Acanthamoeba castellanii str. Neff	14922669
ACA1_385240	CDS	ACA1_385240	NW_004457598.1	141640	141846	D	encoded by transcript ACA1_385240A; uncharacterized protein	141640..141846	Acanthamoeba castellanii str. Neff	14922670
ACA1_385350	CDS	ACA1_385350	NW_004457598.1	144752	145138	D	encoded by transcript ACA1_385350A; HMG (high mobility group) box domain containing protein	144752..145138	Acanthamoeba castellanii str. Neff	14922671
ACA1_385360	CDS	ACA1_385360	NW_004457598.1	145694	149861	R	encoded by transcript ACA1_385360A; RasGEF domain containing protein	complement(join(145694..145732,145817..146039,146174..146283,146392..146547,146663..146791,146864..146965,147057..147116,147190..147395,147498..147740,147812..148117,148211..148346,148449..148580,148687..148801,148882..149024,149117..149305,149382..149473,149567..149861))	Acanthamoeba castellanii str. Neff	14922672
ACA1_385370	CDS	ACA1_385370	NW_004457598.1	149923	153920	R	encoded by transcript ACA1_385370A; leucine rich repeat domain containing protein	complement(join(149923..150094,150173..150311,150397..150706,150776..150991,151076..151333,151416..151528,151612..151758,151853..151991,152061..152134,152210..152353,152435..152545,152587..152767,153029..153097,153210..153326,153483..153920))	Acanthamoeba castellanii str. Neff	14922673
ACA1_385380	CDS	ACA1_385380	NW_004457598.1	154557	156342	R	encoded by transcript ACA1_385380A; eukaryotic translation initiation factor 2, putative	complement(join(154557..155353,155428..155869,156053..156265,156328..156342))	Acanthamoeba castellanii str. Neff	14922674
ACA1_385390	CDS	ACA1_385390	NW_004457598.1	157123	163389	D	encoded by transcript ACA1_385390A; Ubiquitinconjugating enzyme subfamily protein	join(157123..157150,157259..157438,157508..157594,157699..157871,157971..158370,158443..158873,158971..159420,159517..159920,160015..160350,160439..160793,160895..161704,161804..161972,162080..162138,162244..162418,162665..162929,163030..163120,163288..163389)	Acanthamoeba castellanii str. Neff	14922675
ACA1_385400	CDS	ACA1_385400	NW_004457598.1	163610	164647	R	encoded by transcript ACA1_385400A; rieske [2fe2s] domain containing protein	complement(join(163610..163721,163835..163891,163990..164030,164118..164152,164235..164387,164521..>164647))	Acanthamoeba castellanii str. Neff	14922676
ACA1_385410	CDS	ACA1_385410	NW_004457598.1	165092	169064	D	encoded by transcript ACA1_385410A; transketolase, putative	join(165092..165251,165372..165472,165644..165725,165855..166076,166161..166222,166319..166586,166692..167028,167108..167224,167294..167410,167493..167583,167659..167790,167883..168033,168130..168578,168667..168813,168945..169064)	Acanthamoeba castellanii str. Neff	14922677
ACA1_385420	CDS	ACA1_385420	NW_004457598.1	169383	171062	D	encoded by transcript ACA1_385420A; uncharacterized protein	join(169383..169729,169859..170051,170136..170236,170367..170418,170504..170672,170815..170945,170979..171062)	Acanthamoeba castellanii str. Neff	14922678
ACA1_385430	CDS	ACA1_385430	NW_004457598.1	171209	171874	R	encoded by transcript ACA1_385430A; S-phase kinase-associated protein 1A isoform b, putative	complement(join(171209..171580,171719..171874))	Acanthamoeba castellanii str. Neff	14922679
ACA1_385440	CDS	ACA1_385440	NW_004457598.1	171994	174821	R	encoded by transcript ACA1_385440A; Hydroxyacidoxoacid transhydrogenase, mitochondrial, putative	complement(join(171994..172339,172431..172497,172568..172661,172797..172945,173097..173239,173336..173514,173611..173718,173842..173970,174060..174271,174392..174513,174625..174821))	Acanthamoeba castellanii str. Neff	14922680
ACA1_385460	CDS	ACA1_385460	NW_004457598.1	176524	181179	R	encoded by transcript ACA1_385460A; PH domain containing protein	complement(join(176524..176586,176664..177082,177199..177306,177383..177557,177635..177781,177870..177951,178121..178215,178293..178362,178446..178509,178622..178691,178773..178875,178938..179020,179087..179155,179236..179322,179412..179478,179545..179708,179795..179860,179953..180016,180089..180174,180270..180368,180479..180550,180634..180695,180797..180868,180990..181179))	Acanthamoeba castellanii str. Neff	14922682
ACA1_385470	CDS	ACA1_385470	NW_004457598.1	182097	183848	D	encoded by transcript ACA1_385470A; pentatricopeptide (PPR) repeatcontaining protein	<182097..183848	Acanthamoeba castellanii str. Neff	14922683
ACA1_385480	CDS	ACA1_385480	NW_004457598.1	184105	185019	R	encoded by transcript ACA1_385480A; EF hand domain containing protein	complement(join(184105..184197,184292..184364,184466..184631,184914..185019))	Acanthamoeba castellanii str. Neff	14922684
ACA1_385490	CDS	ACA1_385490	NW_004457598.1	185433	188843	D	encoded by transcript ACA1_385490A; SH3 domain containing protein	join(185433..185607,185835..186043,186174..186332,186431..186508,186592..186720,186827..186940,187038..187109,187217..187502,187516..188628,188710..188843)	Acanthamoeba castellanii str. Neff	14922685
ACA1_385500	CDS	ACA1_385500	NW_004457598.1	189364	194144	R	encoded by transcript ACA1_385500A; bromodomain domain containing protein	complement(join(189364..189797,189902..189941,190057..190139,190259..190412,190445..190601,190708..190968,191100..191212,191287..191385,191487..191609,191729..191811,191906..192003,192115..192194,192271..192373,192491..192584,192662..192810,192897..193014,193117..193278,193365..193462,193620..193711,193971..194144))	Acanthamoeba castellanii str. Neff	14922686
ACA1_385510	CDS	ACA1_385510	NW_004457598.1	195404	196931	D	encoded by transcript ACA1_385510A; regulator of chromosome condensation (RCC1) repeat domain containing protein	join(195404..195481,195540..195577,195700..195830,195894..195979,196067..196124,196194..196349,196430..196585,196666..196770,196861..196931)	Acanthamoeba castellanii str. Neff	14922687
ACA1_385520	CDS	ACA1_385520	NW_004457598.1	197571	198040	D	encoded by transcript ACA1_385520A; uncharacterized protein	join(197571..197611,197681..197844,197925..198040)	Acanthamoeba castellanii str. Neff	14922688
ACA1_385530	CDS	ACA1_385530	NW_004457598.1	199005	203138	R	encoded by transcript ACA1_385530A; transporter, monovalent cation:proton antiporter2 (CPA2) family protein	complement(join(199005..199982,200045..200164,200236..200532,200862..201033,201125..201334,201425..201518,201606..201690,201781..201961,202118..202258,202347..202504,202613..202902,202985..203138))	Acanthamoeba castellanii str. Neff	14922689
ACA1_385540	CDS	ACA1_385540	NW_004457598.1	203478	206215	R	encoded by transcript ACA1_385540A; protein kinase domain containing protein	complement(join(203478..203994,204108..204247,204354..204472,204556..204791,204905..205068,205194..205450,205544..205716,205861..206045,206162..206215))	Acanthamoeba castellanii str. Neff	14922690
ACA1_385550	CDS	ACA1_385550	NW_004457598.1	206707	208050	R	encoded by transcript ACA1_385550A; uncharacterized protein	complement(206707..208050)	Acanthamoeba castellanii str. Neff	14922691
ACA1_385560	CDS	ACA1_385560	NW_004457598.1	208529	210248	R	encoded by transcript ACA1_385560A; uncharacterized protein	complement(join(208529..209313,209409..209483,209572..210169,210222..210248))	Acanthamoeba castellanii str. Neff	14922692
ACA1_385570	CDS	ACA1_385570	NW_004457598.1	210725	213561	R	encoded by transcript ACA1_385570A; tetratricopeptide repeat domain containing protein	complement(join(210725..210952,211031..211159,211278..211400,211493..211614,211695..211764,211847..211926,212021..212043,212164..212263,212341..212448,212531..212674,212820..213087,213210..213266,213415..213561))	Acanthamoeba castellanii str. Neff	14922693
ACA1_385580	CDS	ACA1_385580	NW_004457598.1	213727	214436	R	encoded by transcript ACA1_385580A; uncharacterized protein	complement(join(213727..213797,213911..214436))	Acanthamoeba castellanii str. Neff	14922694
ACA1_385590	CDS	ACA1_385590	NW_004457598.1	214454	214780	R	encoded by transcript ACA1_385590A; uncharacterized protein	complement(join(214454..214488,214567..214780))	Acanthamoeba castellanii str. Neff	14922695
ACA1_385600	CDS	ACA1_385600	NW_004457598.1	214795	215502	R	encoded by transcript ACA1_385600A; uncharacterized protein	complement(join(214795..214896,214974..215166,215267..215502))	Acanthamoeba castellanii str. Neff	14922696
ACA1_385610	CDS	ACA1_385610	NW_004457598.1	215899	217262	D	encoded by transcript ACA1_385610A; leucine rich repeat domain containing protein	join(215899..216014,216100..216682,216755..216876,216994..217096,217179..217262)	Acanthamoeba castellanii str. Neff	14922697
ACA1_385620	CDS	ACA1_385620	NW_004457598.1	217390	218760	R	encoded by transcript ACA1_385620A; uncharacterized protein	complement(join(217390..217639,217723..217819,217892..217998,218066..218760))	Acanthamoeba castellanii str. Neff	14922698
ACA1_385630	CDS	ACA1_385630	NW_004457598.1	219180	220434	R	encoded by transcript ACA1_385630A; uncharacterized protein	complement(join(219180..219415,219493..219620,219728..220434))	Acanthamoeba castellanii str. Neff	14922699
ACA1_385640	CDS	ACA1_385640	NW_004457598.1	220947	222671	D	encoded by transcript ACA1_385640A; uncharacterized protein	join(220947..221291,221465..221547,221656..221743,221865..221950,222052..222154,222315..222419,222537..222671)	Acanthamoeba castellanii str. Neff	14922700
ACA1_385650	CDS	ACA1_385650	NW_004457598.1	223074	227666	D	encoded by transcript ACA1_385650A; leucine rich repeat domain containing protein	join(223074..223185,223370..223590,223837..223955,224032..224072,224164..224375,224536..224698,224775..224882,224954..225169,225281..225391,225507..225641,225788..225862,225942..226147,226252..226379,226466..227666)	Acanthamoeba castellanii str. Neff	14922701
ACA1_385660	CDS	ACA1_385660	NW_004457598.1	229639	231825	D	encoded by transcript ACA1_385660A; pentatricopeptide repeat domain/PPR repeatcontaining protein	join(229639..229660,229677..229813,229898..230757,230857..230961,231053..231311,231410..231532,231652..231825)	Acanthamoeba castellanii str. Neff	14922702
ACA1_385670	CDS	ACA1_385670	NW_004457598.1	232094	234789	D	encoded by transcript ACA1_385670A; protein kinase domain containing protein	join(232094..232245,232397..232462,232551..232760,232842..232971,233062..233224,233344..233492,233644..233859,233968..234789)	Acanthamoeba castellanii str. Neff	14922703
ACA1_385680	CDS	ACA1_385680	NW_004457598.1	235211	236523	D	encoded by transcript ACA1_385680A; casein kinase ii subunit beta, putative	join(235211..235216,235396..235648,235817..236092,236184..236327,236462..236523)	Acanthamoeba castellanii str. Neff	14922704
ACA1_385690	CDS	ACA1_385690	NW_004457598.1	237272	238476	R	encoded by transcript ACA1_385690A; oxidoreductase, short chain dehydrogenase/reductase superfamily protein	complement(join(237272..237675,237754..237935,238014..238264,238399..238476))	Acanthamoeba castellanii str. Neff	14922705
ACA1_385700	CDS	ACA1_385700	NW_004457598.1	240824	242506	D	encoded by transcript ACA1_385700A; uncharacterized protein	join(240824..240963,241037..241121,241211..241285,241344..241441,241527..241652,241742..241959,242026..242117,242205..242322,242409..242506)	Acanthamoeba castellanii str. Neff	14922706
ACA1_385710	CDS	ACA1_385710	NW_004457598.1	242950	247764	R	encoded by transcript ACA1_385710A; inorganic anion transporter, sulfate permease (SulP) subfamily protein	complement(join(242950..243257,243401..243529,243611..243684,243777..243854,243984..244104,244207..244368,244435..244554,244698..244781,244856..244944,245053..245123,245223..245292,245312..245345,245553..245703,245800..245919,246225..246305,246442..246877,246893..247370,247472..247603,247701..247764))	Acanthamoeba castellanii str. Neff	14922707
ACA1_385720	CDS	ACA1_385720	NW_004457598.1	248605	251741	D	encoded by transcript ACA1_385720A; protein kinase domain containing protein	join(248605..248724,248891..248971,249089..249189,249324..249496,249635..249819,249921..249992,250072..250141,250276..250366,250428..250530,250633..250753,250860..250978,251056..251202,251301..251436,251560..251741)	Acanthamoeba castellanii str. Neff	14922708
ACA1_385730	CDS	ACA1_385730	NW_004457598.1	251834	254480	R	encoded by transcript ACA1_385730A; cytochrome p450 superfamily protein	complement(join(251834..251871,251988..252114,252222..252373,252530..252741,252862..252913,252998..253109,253251..253375,253473..253692,253762..253855,253960..254072,254208..254315,254424..254480))	Acanthamoeba castellanii str. Neff	14922709
ACA1_385740	CDS	ACA1_385740	NW_004457598.1	254808	255461	D	encoded by transcript ACA1_385740A; uncharacterized protein	join(254808..254855,254910..255461)	Acanthamoeba castellanii str. Neff	14922710
ACA1_385750	CDS	ACA1_385750	NW_004457598.1	256068	256711	R	encoded by transcript ACA1_385750A; nicotinamide-nucleotide adenylyltransferase/ nicotinate-nucleotide adenylyltransferase, putative	complement(join(256068..256080,256106..256197,256266..256359,256438..256556,256592..256711))	Acanthamoeba castellanii str. Neff	14922711
ACA1_385760	CDS	ACA1_385760	NW_004457598.1	257101	258203	R	encoded by transcript ACA1_385760A; MSP (Major sperm protein) domain containing protein	complement(join(257101..257226,257297..257493,257633..257708,257834..258046,258117..258203))	Acanthamoeba castellanii str. Neff	14922712
ACA1_385770	CDS	ACA1_385770	NW_004457598.1	259654	262525	R	encoded by transcript ACA1_385770A; protein kinase domain containing protein	complement(join(259654..259733,259827..259962,260064..260181,260268..260290,260388..260506,260604..260727,260833..261026,261104..261173,261259..261330,261392..261505,261599..261669,261740..261912,262015..262118,262182..262271,262436..262525))	Acanthamoeba castellanii str. Neff	14922713
ACA1_385780	CDS	ACA1_385780	NW_004457598.1	262827	265992	R	encoded by transcript ACA1_385780A; protein kinase domain containing protein	complement(join(262827..262972,263060..263339,263438..263556,263620..263770,263897..264090,264161..264233,264339..264410,264476..264589,264727..264797,265021..265387,265556..265645,265861..265992))	Acanthamoeba castellanii str. Neff	14922714
ACA1_385800	CDS	ACA1_385800	NW_004457598.1	269322	269796	R	encoded by transcript ACA1_385800A; TPR repeat region protein	complement(join(269322..269745,269756..>269796))	Acanthamoeba castellanii str. Neff	14922716
ACA1_385810	CDS	ACA1_385810	NW_004457598.1	270197	275071	D	encoded by transcript ACA1_385810A; Rap/ranGAP domain containing protein	join(270197..270530,270679..270731,270805..270939,271054..272526,272592..272673,272778..272876,273007..273187,273255..273624,273765..273870,273999..274097,274200..274303,274408..274504,274606..274693,274772..274878,274965..275071)	Acanthamoeba castellanii str. Neff	14922717
ACA1_385820	CDS	ACA1_385820	NW_004457598.1	275435	278553	D	encoded by transcript ACA1_385820A; SH2 domain/protein kinase domain containing protein	join(275435..275493,275596..275647,275663..275715,275810..275885,275958..276019,276119..276193,276280..276350,276410..276532,276616..276682,276772..276919,277003..277097,277193..277491,277580..277703,277783..277913,278002..278162,278257..278553)	Acanthamoeba castellanii str. Neff	14922718
ACA1_385830	CDS	ACA1_385830	NW_004457598.1	278770	281427	D	encoded by transcript ACA1_385830A; Microtubule associated protein (MAP65/ASE1 family)	join(278770..279015,279278..279415,279480..279631,279736..279898,279969..280091,280168..280267,280370..280467,280552..280783,280858..280953,281036..281147,281244..281427)	Acanthamoeba castellanii str. Neff	14922719
ACA1_385840	CDS	ACA1_385840	NW_004457598.1	281763	283541	D	encoded by transcript ACA1_385840A; Fbox domain containing protein	join(281763..281853,281933..282031,282145..282237,282324..282388,282451..282559,282724..282847,283120..283175,283408..283541)	Acanthamoeba castellanii str. Neff	14922720
ACA1_385850	CDS	ACA1_385850	NW_004457598.1	284133	287771	D	encoded by transcript ACA1_385850A; uncharacterized protein	join(284133..284153,284262..284385,284605..284742,284951..285088,285201..285224,285287..285418,285611..285736,285818..285844,285927..286040,286107..286133,286231..286268,286402..286558,286652..286759,286793..286999,287075..287153,287229..287494,287554..287771)	Acanthamoeba castellanii str. Neff	14922721
ACA1_385860	CDS	ACA1_385860	NW_004457598.1	287888	291975	D	encoded by transcript ACA1_385860A; AlphaN-acetylglucosaminidase (NAGLU)	join(287888..288007,288044..288135,288276..288372,288470..288612,288720..288860,288968..289052,289135..289304,289424..289556,289619..289705,289773..289867,289966..290147,290237..290315,290379..290444,290512..290680,290782..290960,291045..291139,291238..291434,291558..291683,291829..291975)	Acanthamoeba castellanii str. Neff	14922722
ACA1_385870	CDS	ACA1_385870	NW_004457598.1	292894	294828	R	encoded by transcript ACA1_385870A; uncharacterized protein	complement(join(292894..293677,293897..294055,294157..294496,294642..294828))	Acanthamoeba castellanii str. Neff	14922723
ACA1_385880	CDS	ACA1_385880	NW_004457598.1	295311	301691	R	encoded by transcript ACA1_385880A; uncharacterized protein	complement(join(295311..295457,295532..295659,295767..295926,296051..296186,296268..296842,296951..297066,297183..298329,298366..298423,298509..299198,299293..299397,299465..299513,299606..299731,299751..300043,300110..300335,300409..300674,300749..300827,300904..301029,301132..301242,301329..301533,301632..301691))	Acanthamoeba castellanii str. Neff	14922724
ACA1_385890	CDS	ACA1_385890	NW_004457598.1	302447	303191	R	encoded by transcript ACA1_385890A; cell wall surface anchor family protein	complement(join(302447..302460,302484..302615,302698..302721,302801..302935,303024..303047,303149..303191))	Acanthamoeba castellanii str. Neff	14922725
ACA1_385900	CDS	ACA1_385900	NW_004457598.1	304863	305399	D	encoded by transcript ACA1_385900A; uncharacterized protein	304863..305399	Acanthamoeba castellanii str. Neff	14922726
ACA1_385910	CDS	ACA1_385910	NW_004457598.1	305933	306640	D	encoded by transcript ACA1_385910A; uncharacterized protein	join(<305933..306289,306575..306640)	Acanthamoeba castellanii str. Neff	14922727
ACA1_385920	CDS	ACA1_385920	NW_004457598.1	307162	310985	R	encoded by transcript ACA1_385920A; regulator of chromosome condensation (RCC1) repeat domain containing protein	complement(join(307162..307382,307482..307747,307826..307904,307990..308130,308234..308344,308441..308501,308564..308598,308720..308785,308981..309094,309215..309241,309314..309436,309520..309546,309614..309745,309817..309840,309951..310088,310285..310422,310645..310768,310965..310985))	Acanthamoeba castellanii str. Neff	14922728
ACA1_385930	CDS	ACA1_385930	NW_004457598.1	311251	312624	R	encoded by transcript ACA1_385930A; acetyltransferase, GNAT superfamily protein	complement(join(311251..311638,311770..311986,312089..312157,312237..312321,312439..312624))	Acanthamoeba castellanii str. Neff	14922729
ACA1_385940	CDS	ACA1_385940	NW_004457598.1	312776	314490	D	encoded by transcript ACA1_385940A; acetyltransferase, GNAT superfamily protein	join(312776..312955,313084..313171,313250..313318,313434..313650,313762..314052,314472..314490)	Acanthamoeba castellanii str. Neff	14922730
ACA1_386050	CDS	ACA1_386050	NW_004457598.1	314712	315086	D	encoded by transcript ACA1_386050A; uncharacterized protein	314712..315086	Acanthamoeba castellanii str. Neff	14922731
ACA1_386060	CDS	ACA1_386060	NW_004457598.1	315188	315580	R	encoded by transcript ACA1_386060A; uncharacterized protein	complement(315188..>315580)	Acanthamoeba castellanii str. Neff	14922732
ACA1_386070	CDS	ACA1_386070	NW_004457598.1	315633	316166	D	encoded by transcript ACA1_386070A; thioester reductase domain containing protein	join(315633..315637,315764..316166)	Acanthamoeba castellanii str. Neff	14922733
ACA1_386080	CDS	ACA1_386080	NW_004457598.1	317096	317475	D	encoded by transcript ACA1_386080A; uncharacterized protein	join(317096..317290,317371..317475)	Acanthamoeba castellanii str. Neff	14922734
ACA1_386090	CDS	ACA1_386090	NW_004457598.1	317561	318025	D	encoded by transcript ACA1_386090A; uncharacterized protein	317561..318025	Acanthamoeba castellanii str. Neff	14922735
ACA1_386100	CDS	ACA1_386100	NW_004457598.1	318658	319559	R	encoded by transcript ACA1_386100A; response regulator receiver domain containing protein	complement(join(318658..318915,318966..319085,319288..319398,319488..319559))	Acanthamoeba castellanii str. Neff	14922736
ACA1_386210	CDS	ACA1_386210	NW_004457598.1	320442	321048	D	encoded by transcript ACA1_386210A; uncharacterized protein	join(320442..320762,320908..321048)	Acanthamoeba castellanii str. Neff	14922737
ACA1_386220	CDS	ACA1_386220	NW_004457598.1	321159	321632	R	encoded by transcript ACA1_386220A; thioredoxin domain containing protein	complement(321159..321632)	Acanthamoeba castellanii str. Neff	14922738
ACA1_386230	CDS	ACA1_386230	NW_004457598.1	321684	322272	R	encoded by transcript ACA1_386230A; uncharacterized protein	complement(join(321684..322051,322098..322272))	Acanthamoeba castellanii str. Neff	14922739
ACA1_386240	CDS	ACA1_386240	NW_004457598.1	323456	327641	R	encoded by transcript ACA1_386240A; response regulator receiver domain containing protein	complement(join(323456..323505,323662..324280,324365..324657,324741..324921,325013..325320,325431..325506,325618..325860,326150..326360,326663..326765,326955..327057,327129..327641))	Acanthamoeba castellanii str. Neff	14922740
ACA1_386350	CDS	ACA1_386350	NW_004457598.1	328224	332702	R	encoded by transcript ACA1_386350A; ATPase/histidine kinase/DNA gyrase B/HSP90 domain containing protein	complement(join(328224..328300,328474..328545,328726..328854,328955..329285,329367..329462,329556..329745,329852..330013,330114..330251,330380..330472,330581..330696,330801..330934,331018..331105,331216..331315,331437..332002,332211..332441,332622..332702))	Acanthamoeba castellanii str. Neff	14922741
ACA1_386360	CDS	ACA1_386360	NW_004457598.1	333683	335221	D	encoded by transcript ACA1_386360A; uncharacterized protein	join(333683..333950,334091..334456,334540..334860,335013..335221)	Acanthamoeba castellanii str. Neff	14922742
ACA1_386370	CDS	ACA1_386370	NW_004457598.1	335744	337792	D	encoded by transcript ACA1_386370A; uncharacterized protein	join(335744..335848,336073..336540,336618..336681,336788..336880,336963..337082,337140..337273,337411..337526,337696..337792)	Acanthamoeba castellanii str. Neff	14922743
ACA1_386380	CDS	ACA1_386380	NW_004457598.1	337890	345108	D	encoded by transcript ACA1_386380A; response regulator receiver domain containing protein	join(337890..338296,338392..338581,338678..338773,338885..339099,339222..339376,339498..339698,339823..340673,340790..340907,341004..341106,341239..341449,341540..341672,341807..342121,342233..342364,342496..342834,342928..343223,343301..343776,343862..343949,344052..344651,344764..344874,344962..345108)	Acanthamoeba castellanii str. Neff	14922744
ACA1_386390	CDS	ACA1_386390	NW_004457598.1	346529	348552	D	encoded by transcript ACA1_386390A; helicase conserved Cterminal domain containing protein	join(346529..346633,346832..347219,347258..347814,347893..348552)	Acanthamoeba castellanii str. Neff	14922745
ACA1_386400	CDS	ACA1_386400	NW_004457598.1	348620	349197	R	encoded by transcript ACA1_386400A; uncharacterized protein	complement(join(348620..348928,348985..349197))	Acanthamoeba castellanii str. Neff	14922746
ACA1_386410	CDS	ACA1_386410	NW_004457598.1	349897	350262	D	encoded by transcript ACA1_386410A; uncharacterized protein	349897..350262	Acanthamoeba castellanii str. Neff	14922747
ACA1_386420	CDS	ACA1_386420	NW_004457598.1	353219	354561	D	encoded by transcript ACA1_386420A; uncharacterized protein	join(353219..353291,353375..353472,353568..353738,353820..353964,354051..354179,354255..354318,354420..354561)	Acanthamoeba castellanii str. Neff	14922748
ACA1_386430	CDS	ACA1_386430	NW_004457598.1	354653	354925	R	encoded by transcript ACA1_386430A; uncharacterized protein	complement(354653..>354925)	Acanthamoeba castellanii str. Neff	14922749
ACA1_386440	CDS	ACA1_386440	NW_004457598.1	355433	355915	R	encoded by transcript ACA1_386440A; uncharacterized protein	complement(355433..355915)	Acanthamoeba castellanii str. Neff	14922750
ACA1_386460	CDS	ACA1_386460	NW_004457598.1	357445	357831	D	encoded by transcript ACA1_386460A; uncharacterized protein	357445..357831	Acanthamoeba castellanii str. Neff	14922752
ACA1_386470	CDS	ACA1_386470	NW_004457598.1	357927	358516	D	encoded by transcript ACA1_386470A; uncharacterized protein	join(357927..358312,358342..358516)	Acanthamoeba castellanii str. Neff	14922753
ACA1_386480	CDS	ACA1_386480	NW_004457598.1	358667	359549	R	encoded by transcript ACA1_386480A; uncharacterized protein	complement(join(358667..359220,359453..359549))	Acanthamoeba castellanii str. Neff	14922754
ACA1_386490	CDS	ACA1_386490	NW_004457598.1	359841	360149	D	encoded by transcript ACA1_386490A; uncharacterized protein	359841..360149	Acanthamoeba castellanii str. Neff	14922755
ACA1_386500	CDS	ACA1_386500	NW_004457598.1	360898	361200	R	encoded by transcript ACA1_386500A; uncharacterized protein	complement(360898..361200)	Acanthamoeba castellanii str. Neff	14922756
ACA1_386510	CDS	ACA1_386510	NW_004457598.1	361956	362411	R	encoded by transcript ACA1_386510A; dUTP diphosphatase	complement(join(361956..362195,362253..362411))	Acanthamoeba castellanii str. Neff	14922757
ACA1_386520	CDS	ACA1_386520	NW_004457598.1	362487	362813	D	encoded by transcript ACA1_386520A; uncharacterized protein	362487..362813	Acanthamoeba castellanii str. Neff	14922758
ACA1_386530	CDS	ACA1_386530	NW_004457598.1	363033	363329	R	encoded by transcript ACA1_386530A; uncharacterized protein	complement(join(363033..363119,363144..363329))	Acanthamoeba castellanii str. Neff	14922759
ACA1_386540	CDS	ACA1_386540	NW_004457598.1	363381	363968	R	encoded by transcript ACA1_386540A; uncharacterized protein	complement(363381..363968)	Acanthamoeba castellanii str. Neff	14922760
ACA1_386550	CDS	ACA1_386550	NW_004457598.1	365660	366525	R	encoded by transcript ACA1_386550A; reverse transcriptase	complement(join(365660..365854,365965..366525))	Acanthamoeba castellanii str. Neff	14922761
ACA1_386560	CDS	ACA1_386560	NW_004457598.1	366538	367182	R	encoded by transcript ACA1_386560A; uncharacterized protein	complement(join(366538..366854,366872..366891,367013..367182))	Acanthamoeba castellanii str. Neff	14922762
ACA1_386670	CDS	ACA1_386670	NW_004457598.1	367950	368150	D	encoded by transcript ACA1_386670A; uncharacterized protein	367950..368150	Acanthamoeba castellanii str. Neff	14922763
ACA1_386680	CDS	ACA1_386680	NW_004457598.1	368176	368774	D	encoded by transcript ACA1_386680A; uncharacterized protein	join(368176..368721,368736..368774)	Acanthamoeba castellanii str. Neff	14922764
ACA1_386790	CDS	ACA1_386790	NW_004457598.1	369072	369323	D	encoded by transcript ACA1_386790A; uncharacterized protein	369072..369323	Acanthamoeba castellanii str. Neff	14922765
ACA1_386800	CDS	ACA1_386800	NW_004457598.1	371539	372140	D	encoded by transcript ACA1_386800A; uncharacterized protein	join(371539..371709,371817..372140)	Acanthamoeba castellanii str. Neff	14922766
ACA1_386810	CDS	ACA1_386810	NW_004457598.1	373832	374809	D	encoded by transcript ACA1_386810A; non-specific serine/threonine protein kinase	373832..374809	Acanthamoeba castellanii str. Neff	14922767
ACA1_386820	CDS	ACA1_386820	NW_004457598.1	374835	375408	D	encoded by transcript ACA1_386820A; uncharacterized protein	join(374835..375126,375272..375408)	Acanthamoeba castellanii str. Neff	14922768
ACA1_386930	CDS	ACA1_386930	NW_004457598.1	376294	376917	R	encoded by transcript ACA1_386930A; uncharacterized protein	complement(join(376294..376482,376653..376780,376842..376917))	Acanthamoeba castellanii str. Neff	14922769
ACA1_386940	CDS	ACA1_386940	NW_004457598.1	377236	377624	R	encoded by transcript ACA1_386940A; uncharacterized protein	complement(join(377236..377382,377454..377624))	Acanthamoeba castellanii str. Neff	14922770
ACA1_386950	CDS	ACA1_386950	NW_004457598.1	380425	382947	R	encoded by transcript ACA1_386950A; uncharacterized protein	complement(join(380425..380432,380596..380791,380913..380992,381088..381223,381314..381406,381486..381619,381725..381846,381908..382186,382241..382355,382467..382947))	Acanthamoeba castellanii str. Neff	14922771
ACA1_386960	CDS	ACA1_386960	NW_004457598.1	383578	383916	R	encoded by transcript ACA1_386960A; uncharacterized protein	complement(join(383578..383596,383648..383916))	Acanthamoeba castellanii str. Neff	14922772
ACA1_386970	CDS	ACA1_386970	NW_004457598.1	384073	384974	R	encoded by transcript ACA1_386970A; glutaminase	complement(join(384073..384206,384360..384475,384575..384723,384798..384822,384934..384974))	Acanthamoeba castellanii str. Neff	14922773
ACA1_225780	CDS	ACA1_225780	NW_004457596.1	9928	12068	R	encoded by transcript ACA1_225780A; karyogamyrelated protein	complement(join(9928..9939,9993..10235,10310..10543,10625..10684,11781..11878,11969..12068))	Acanthamoeba castellanii str. Neff	14922420
ACA1_225890	CDS	ACA1_225890	NW_004457596.1	12502	15001	D	encoded by transcript ACA1_225890A; uncharacterized protein	join(12502..12717,12891..12989,13054..13156,13228..13331,13418..13532,13607..13719,13789..13890,13955..14059,14133..14183,14248..14446,14544..15001)	Acanthamoeba castellanii str. Neff	14922421
ACA1_225900	CDS	ACA1_225900	NW_004457596.1	17906	20073	D	encoded by transcript ACA1_225900A; transcription factor tfb2 subfamily protein	join(17906..17997,18118..18403,18541..18719,18789..18963,19042..19127,19202..19331,19425..19556,19674..19818,19901..20073)	Acanthamoeba castellanii str. Neff	14922422
ACA1_225910	CDS	ACA1_225910	NW_004457596.1	20200	21169	R	encoded by transcript ACA1_225910A; uncharacterized protein	complement(join(20200..20388,20458..20520,20642..20741,20832..20983,21071..21169))	Acanthamoeba castellanii str. Neff	14922423
ACA1_225920	CDS	ACA1_225920	NW_004457596.1	21303	24121	R	encoded by transcript ACA1_225920A; cholinesterase	complement(join(21303..21489,21587..21683,21776..21847,21958..22102,22214..22341,22435..22498,22646..22711,22844..22903,22985..23119,23215..23418,23560..23723,23832..23925,24014..24121))	Acanthamoeba castellanii str. Neff	14922424
ACA1_225940	CDS	ACA1_225940	NW_004457596.1	26939	27682	R	encoded by transcript ACA1_225940A; uncharacterized protein	complement(join(26939..27104,27132..27682))	Acanthamoeba castellanii str. Neff	14922426
ACA1_225950	CDS	ACA1_225950	NW_004457596.1	28507	30193	R	encoded by transcript ACA1_225950A; thiamine pyrophosphokinase	complement(join(28507..28934,29020..29164,29249..29368,29462..29557,29639..29711,29773..29833,29899..30193))	Acanthamoeba castellanii str. Neff	14922427
ACA1_225960	CDS	ACA1_225960	NW_004457596.1	30337	31952	D	encoded by transcript ACA1_225960A; EF hand domain containing protein	join(30337..30418,30528..30608,30726..30932,31240..31320,31403..31478,31558..31747,31824..31952)	Acanthamoeba castellanii str. Neff	14922428
ACA1_226070	CDS	ACA1_226070	NW_004457596.1	33538	33865	D	encoded by transcript ACA1_226070A; 5'-nucleotidase	join(<33538..33708,33743..33865)	Acanthamoeba castellanii str. Neff	14922429
ACA1_226180	CDS	ACA1_226180	NW_004457596.1	35381	37980	D	encoded by transcript ACA1_226180A; 5'nucleotidase	join(35381..35445,35578..35831,36111..36205,36298..36401,36468..36627,36688..36847,36948..37169,37247..37257,37268..37409,37484..37575,37656..37823,37858..37980)	Acanthamoeba castellanii str. Neff	14922430
ACA1_226190	CDS	ACA1_226190	NW_004457596.1	38160	40792	D	encoded by transcript ACA1_226190A; zinc finger, c2h2 type domain containing protein	join(38160..38585,38668..38906,38987..39137,39206..39397,39493..39724,39803..40005,40020..40301,40375..40634,40738..40792)	Acanthamoeba castellanii str. Neff	14922431
ACA1_226200	CDS	ACA1_226200	NW_004457596.1	41294	42334	D	encoded by transcript ACA1_226200A; uncharacterized protein	41294..42334	Acanthamoeba castellanii str. Neff	14922432
ACA1_226210	CDS	ACA1_226210	NW_004457596.1	42331	43339	R	encoded by transcript ACA1_226210A; Fbox domain containing protein	complement(join(42331..42506,42641..42705,42787..42893,42972..43066,43135..43195,43265..43339))	Acanthamoeba castellanii str. Neff	14922433
ACA1_226320	CDS	ACA1_226320	NW_004457596.1	43877	46270	D	encoded by transcript ACA1_226320A; Armadillo/betacatenin-like repeat domain containing protein	join(43877..44048,44164..44292,44395..44547,44638..44766,44857..44985,45077..45205,45286..45414,45499..45581,45818..46270)	Acanthamoeba castellanii str. Neff	14922434
ACA1_226430	CDS	ACA1_226430	NW_004457596.1	46474	46793	R	encoded by transcript ACA1_226430A; uncharacterized protein	complement(join(46474..46725,46767..46793))	Acanthamoeba castellanii str. Neff	14922435
ACA1_226540	CDS	ACA1_226540	NW_004457596.1	48994	49435	D	encoded by transcript ACA1_226540A; zinc finger, C3HC4 type (RING finger) domain containing protein	join(48994..49108,49224..49435)	Acanthamoeba castellanii str. Neff	14922436
ACA1_226550	CDS	ACA1_226550	NW_004457596.1	49705	51947	D	encoded by transcript ACA1_226550A; histidine ammonialyase, putative	join(49705..50344,50482..50597,50688..50822,50926..51025,51066..51265,51341..51550,51633..51745,51839..51947)	Acanthamoeba castellanii str. Neff	14922437
ACA1_226670	CDS	ACA1_226670	NW_004457596.1	53153	53602	R	encoded by transcript ACA1_226670A; uncharacterized protein	complement(53153..53602)	Acanthamoeba castellanii str. Neff	14922439
ACA1_226680	CDS	ACA1_226680	NW_004457596.1	53798	54357	D	encoded by transcript ACA1_226680A; uncharacterized protein	join(53798..54125,54238..54325,54339..54357)	Acanthamoeba castellanii str. Neff	14922440
ACA1_226690	CDS	ACA1_226690	NW_004457596.1	54525	56831	R	encoded by transcript ACA1_226690A; phosphoribulokinase / uridine kinase superfamily protein	complement(join(54525..54596,54749..54889,54984..55199,55287..55551,55649..55697,55781..55904,56018..56174,56299..56390,56494..56641,56750..56800,56818..56831))	Acanthamoeba castellanii str. Neff	14922441
ACA1_226700	CDS	ACA1_226700	NW_004457596.1	57062	59450	D	encoded by transcript ACA1_226700A; selenocysteinespecific elongation factor, putative	join(57062..57149,57229..57354,57430..57578,57679..57897,58005..58202,58283..58478,58580..58666,58761..58922,59003..59102,59192..59450)	Acanthamoeba castellanii str. Neff	14922442
ACA1_226710	CDS	ACA1_226710	NW_004457596.1	59540	62010	R	encoded by transcript ACA1_226710A; uncharacterized protein	complement(join(59540..60232,60322..60425,60509..60716,60810..60967,61214..61332,61550..62010))	Acanthamoeba castellanii str. Neff	14922443
ACA1_226720	CDS	ACA1_226720	NW_004457596.1	63045	64202	R	encoded by transcript ACA1_226720A; DnaJ domain containing protein	complement(63045..64202)	Acanthamoeba castellanii str. Neff	14922444
ACA1_226730	CDS	ACA1_226730	NW_004457596.1	64747	68794	R	encoded by transcript ACA1_226730A; PH domain containing protein	complement(join(64747..64833,64903..65265,65350..65558,65643..65855,65953..66005,66191..66423,66542..66767,66841..66998,67081..67202,67351..67486,67590..67694,67793..67930,67994..68619,68734..68794))	Acanthamoeba castellanii str. Neff	14922445
ACA1_226740	CDS	ACA1_226740	NW_004457596.1	68956	69902	R	encoded by transcript ACA1_226740A; GDSL family lipase/acylhydrolase domain containing protein	complement(join(68956..69044,69111..69217,69283..69469,69586..69691,69771..69902))	Acanthamoeba castellanii str. Neff	14922446
ACA1_226750	CDS	ACA1_226750	NW_004457596.1	70208	72356	D	encoded by transcript ACA1_226750A; calponin domain containing protein	join(70208..70352,70475..70716,70813..70963,71054..71093,71393..71529,71638..71759,71887..71973,72237..72356)	Acanthamoeba castellanii str. Neff	14922447
ACA1_226760	CDS	ACA1_226760	NW_004457596.1	72719	74681	D	encoded by transcript ACA1_226760A; uncharacterized protein	join(72719..72858,72950..73056,73195..73349,73461..73788,73906..74681)	Acanthamoeba castellanii str. Neff	14922448
ACA1_226770	CDS	ACA1_226770	NW_004457596.1	74758	76197	R	encoded by transcript ACA1_226770A; Histone-lysine N-methyltransferase	complement(join(74758..74964,75216..75630,75749..75974,76034..76059,76070..76197))	Acanthamoeba castellanii str. Neff	14922449
ACA1_226880	CDS	ACA1_226880	NW_004457596.1	76924	79012	R	encoded by transcript ACA1_226880A; Histone-lysine N-methyltransferase	complement(join(76924..77130,77280..77615,77779..78008,78068..78093,78104..78272,78360..78628,78708..78852,78889..79012))	Acanthamoeba castellanii str. Neff	14922450
ACA1_226890	CDS	ACA1_226890	NW_004457596.1	79169	79596	R	encoded by transcript ACA1_226890A; Ankyrin repeatcontaining protein	complement(join(79169..79207,79270..79317,79393..79596))	Acanthamoeba castellanii str. Neff	14922451
ACA1_226900	CDS	ACA1_226900	NW_004457596.1	79677	80261	R	encoded by transcript ACA1_226900A; ankyrin repeat-containing protein	complement(join(79677..79855,79933..80141,80191..80261))	Acanthamoeba castellanii str. Neff	14922452
ACA1_227010	CDS	ACA1_227010	NW_004457596.1	82416	83427	R	encoded by transcript ACA1_227010A; Utp11 protein	complement(join(82416..82661,82740..82835,83015..83128,83215..83427))	Acanthamoeba castellanii str. Neff	14922453
ACA1_227030	CDS	ACA1_227030	NW_004457596.1	86635	87258	D	encoded by transcript ACA1_227030A; IPT/TIG domain containing protein	join(86635..86734,86813..86964,87031..87258)	Acanthamoeba castellanii str. Neff	14922455
ACA1_227050	CDS	ACA1_227050	NW_004457596.1	88753	90197	D	encoded by transcript ACA1_227050A; uncharacterized protein	join(88753..88950,89080..89222,89312..89418,89515..89631,89766..89987,90091..90197)	Acanthamoeba castellanii str. Neff	14922457
ACA1_227070	CDS	ACA1_227070	NW_004457596.1	92814	94250	R	encoded by transcript ACA1_227070A; uncharacterized protein	complement(join(92814..92903,92996..93118,93318..93375,93457..93542,93842..93953,93989..94084,94144..94250))	Acanthamoeba castellanii str. Neff	14922459
ACA1_227080	CDS	ACA1_227080	NW_004457596.1	94537	96281	D	encoded by transcript ACA1_227080A; uracilDNA glycosylase	join(94537..94749,94827..94913,95014..95156,95256..95344,95444..95499,95571..95748,95850..95964,96047..96281)	Acanthamoeba castellanii str. Neff	14922460
ACA1_227090	CDS	ACA1_227090	NW_004457596.1	96678	97212	D	encoded by transcript ACA1_227090A; uncharacterized protein	join(96678..96752,96897..96962,97030..97212)	Acanthamoeba castellanii str. Neff	14922461
ACA1_227100	CDS	ACA1_227100	NW_004457596.1	97501	99170	R	encoded by transcript ACA1_227100A; uncharacterized protein	complement(join(97501..97715,97817..97952,98120..98230,98297..98419,98485..98617,98697..98785,99099..99170))	Acanthamoeba castellanii str. Neff	14922462
ACA1_227110	CDS	ACA1_227110	NW_004457596.1	102416	103107	D	encoded by transcript ACA1_227110A; uncharacterized protein	join(102416..102596,102644..102848,102948..103107)	Acanthamoeba castellanii str. Neff	14922463
ACA1_227120	CDS	ACA1_227120	NW_004457596.1	103706	104427	D	encoded by transcript ACA1_227120A; uncharacterized protein	join(103706..103969,104380..104427)	Acanthamoeba castellanii str. Neff	14922464
ACA1_227230	CDS	ACA1_227230	NW_004457596.1	105041	105470	D	encoded by transcript ACA1_227230A; uncharacterized protein	join(105041..105165,105248..105470)	Acanthamoeba castellanii str. Neff	14922465
ACA1_227240	CDS	ACA1_227240	NW_004457596.1	105674	106476	D	encoded by transcript ACA1_227240A; uncharacterized protein	join(105674..105695,105770..105798,105880..105948,106086..106151,106219..106373,106452..106476)	Acanthamoeba castellanii str. Neff	14922466
ACA1_227250	CDS	ACA1_227250	NW_004457596.1	106678	107063	R	encoded by transcript ACA1_227250A; uncharacterized protein	complement(join(106678..106892,106994..107063))	Acanthamoeba castellanii str. Neff	14922467
ACA1_227260	CDS	ACA1_227260	NW_004457596.1	107196	109608	D	encoded by transcript ACA1_227260A; uncharacterized protein	join(107196..107887,107989..108113,108180..108263,108395..108546,108706..109125,109147..109608)	Acanthamoeba castellanii str. Neff	14922468
ACA1_227370	CDS	ACA1_227370	NW_004457596.1	111322	112864	D	encoded by transcript ACA1_227370A; uncharacterized protein	join(111322..111480,111567..111723,111808..111932,112055..112167,112238..112274,112406..112864)	Acanthamoeba castellanii str. Neff	14922469
ACA1_227590	CDS	ACA1_227590	NW_004457596.1	118474	118976	D	encoded by transcript ACA1_227590A; uncharacterized protein	join(118474..118829,118958..118976)	Acanthamoeba castellanii str. Neff	14922471
ACA1_227700	CDS	ACA1_227700	NW_004457596.1	119528	120459	R	encoded by transcript ACA1_227700A; isocitrate dehydrogenase Idp1, putative	complement(join(119528..119581,119623..119783,119870..120035,120121..120218,120354..120459))	Acanthamoeba castellanii str. Neff	14922472
ACA1_227710	CDS	ACA1_227710	NW_004457596.1	120734	123087	D	encoded by transcript ACA1_227710A; uncharacterized protein	join(120734..120832,120932..121082,121150..121338,121421..123087)	Acanthamoeba castellanii str. Neff	14922473
ACA1_227720	CDS	ACA1_227720	NW_004457596.1	124019	124644	R	encoded by transcript ACA1_227720A; uncharacterized protein	complement(join(124019..124035,124198..124284,124483..124512,124611..124644))	Acanthamoeba castellanii str. Neff	14922474
ACA1_227730	CDS	ACA1_227730	NW_004457596.1	124893	127330	D	encoded by transcript ACA1_227730A; FYVE zinc finger domain containing protein	join(124893..125183,125312..125421,125548..125608,125741..125842,125954..126064,126166..126269,126388..126574,126697..126816,126896..127061,127203..127330)	Acanthamoeba castellanii str. Neff	14922475
ACA1_227740	CDS	ACA1_227740	NW_004457596.1	127654	128615	R	encoded by transcript ACA1_227740A; uncharacterized protein	complement(join(127654..127659,127706..127789,127900..128331,128421..128615))	Acanthamoeba castellanii str. Neff	14922476
ACA1_227750	CDS	ACA1_227750	NW_004457596.1	129705	131055	D	encoded by transcript ACA1_227750A; FYVE zinc finger domain containing protein	join(129705..129877,129954..130076,130154..130328,130377..130611,130673..131055)	Acanthamoeba castellanii str. Neff	14922477
ACA1_227760	CDS	ACA1_227760	NW_004457596.1	131776	132478	D	encoded by transcript ACA1_227760A; Ras subfamily protein	join(131776..131928,131961..132006,132131..132189,132356..132478)	Acanthamoeba castellanii str. Neff	14922478
ACA1_227770	CDS	ACA1_227770	NW_004457596.1	132701	133838	R	encoded by transcript ACA1_227770A; uncharacterized protein	complement(join(132701..132736,132827..132910,133127..133558,133644..133838))	Acanthamoeba castellanii str. Neff	14922479
ACA1_227780	CDS	ACA1_227780	NW_004457596.1	134771	137044	D	encoded by transcript ACA1_227780A; rhamnose biosynthetic enzyme 3, putative	join(134771..134950,135041..135131,135211..135287,135380..135439,135519..135595,135674..135799,135887..135981,136078..136296,136377..136453,136749..136878,136959..137044)	Acanthamoeba castellanii str. Neff	14922480
ACA1_227790	CDS	ACA1_227790	NW_004457596.1	137433	138577	R	encoded by transcript ACA1_227790A; phosphateresponsive 1 family protein	complement(join(137433..137556,137619..137750,137814..137947,138010..138080,138202..138312,138388..138458,138522..138577))	Acanthamoeba castellanii str. Neff	14922481
ACA1_227800	CDS	ACA1_227800	NW_004457596.1	139483	140061	D	encoded by transcript ACA1_227800A; uncharacterized protein	join(139483..139645,139716..139843,139930..140061)	Acanthamoeba castellanii str. Neff	14922482
ACA1_227810	CDS	ACA1_227810	NW_004457596.1	140184	142556	D	encoded by transcript ACA1_227810A; origin recognition complex subunit 5 family protein	join(140184..140324,140407..140676,140758..140832,140940..141051,141133..141189,141279..141395,141468..141566,141698..141858,141968..142093,142163..142299,142445..142556)	Acanthamoeba castellanii str. Neff	14922483
ACA1_227820	CDS	ACA1_227820	NW_004457596.1	142799	147256	R	encoded by transcript ACA1_227820A; calponin domain containing protein	complement(join(142799..142920,142990..143107,143242..143391,143496..143591,143789..143893,144002..144100,144198..144275,144349..144437,144595..144690,144794..144833,144995..145114,145236..145820,145928..146017,146108..146272,146369..146544,146773..146943,147058..147256))	Acanthamoeba castellanii str. Neff	14922484
ACA1_227830	CDS	ACA1_227830	NW_004457596.1	147849	152913	D	encoded by transcript ACA1_227830A; PhoPQactivated pathogenicity-related protein-like protein, putative	join(147849..148064,148224..148464,148550..148742,148839..148948,149041..149149,149244..149355,149445..149617,149730..149793,151512..151581,151674..151782,151877..151988,152078..152250,152363..152451,152559..152691,152835..152913)	Acanthamoeba castellanii str. Neff	14922485
ACA1_228040	CDS	ACA1_228040	NW_004457596.1	153138	155104	D	encoded by transcript ACA1_228040A; homeobox domain containing protein	join(153138..154038,154065..155104)	Acanthamoeba castellanii str. Neff	14922486
ACA1_228050	CDS	ACA1_228050	NW_004457596.1	155215	158547	D	encoded by transcript ACA1_228050A; uncharacterized protein	join(155215..155334,155412..155553,155698..155803,155891..155989,156110..156170,156186..156280,156411..156496,156558..156648,156725..156807,156917..156985,157195..157520,157689..157966,158126..158220,158386..>158547)	Acanthamoeba castellanii str. Neff	14922487
ACA1_228260	CDS	ACA1_228260	NW_004457596.1	158855	162115	D	encoded by transcript ACA1_228260A; ABC2 type transporter superfamily protein	join(158855..158881,159023..159155,159255..159343,159545..159638,159711..159829,159939..160109,160191..160329,160415..160515,160602..160666,160747..160864,160955..161129,161198..161277,161635..161774,161878..162010,162074..162115)	Acanthamoeba castellanii str. Neff	14922488
ACA1_228370	CDS	ACA1_228370	NW_004457596.1	164434	165693	R	encoded by transcript ACA1_228370A; RWD domain containing protein	complement(join(164434..164510,164605..164682,164757..164913,165008..165046,165089..165142,165284..165411,165492..165554,165618..165693))	Acanthamoeba castellanii str. Neff	14922489
ACA1_228380	CDS	ACA1_228380	NW_004457596.1	166630	171189	R	encoded by transcript ACA1_228380A; DNAbinding protein SMUBP-2, putative	complement(join(166630..166653,166710..166861,166943..167003,167071..167175,167279..167370,167452..167550,167644..167751,167845..167954,168037..168147,168234..168406,168492..168584,168655..168725,168812..168929,169058..169142,169199..169295,169360..169408,169681..169745,169811..169871,170123..170271,170366..170492,170573..170730,170825..170907,170981..171189))	Acanthamoeba castellanii str. Neff	14922490
ACA1_228390	CDS	ACA1_228390	NW_004457596.1	171257	172568	R	encoded by transcript ACA1_228390A; uncharacterized protein	complement(join(171257..171398,171422..171575,171648..171764,171872..171941,172015..172140,172218..172337,172416..172568))	Acanthamoeba castellanii str. Neff	14922491
ACA1_228400	CDS	ACA1_228400	NW_004457596.1	172913	173881	R	encoded by transcript ACA1_228400A; uncharacterized protein	complement(join(172913..172940,173119..173191,173533..173881))	Acanthamoeba castellanii str. Neff	14922492
ACA1_228410	CDS	ACA1_228410	NW_004457596.1	175398	178764	R	encoded by transcript ACA1_228410A; chain a, 4ank: a designed ankyrin repeat protein	complement(join(175398..175429,175507..175663,175753..175832,175913..175996,176065..176169,176777..177162,177243..177277,177290..177369,177454..177603,177667..177759,177829..178002,178094..178198,178256..178341,178395..178535,178613..178764))	Acanthamoeba castellanii str. Neff	14922493
ACA1_228520	CDS	ACA1_228520	NW_004457596.1	179783	180528	R	encoded by transcript ACA1_228520A; ankyrin repeat protein	complement(join(179783..179814,179890..180046,180144..180223,180304..180387,180456..180528))	Acanthamoeba castellanii str. Neff	14922494
ACA1_228630	CDS	ACA1_228630	NW_004457596.1	181384	183816	D	encoded by transcript ACA1_228630A; uncharacterized protein	join(181384..181480,181608..181675,181761..181880,181960..182115,182189..182242,182340..182435,182509..182599,182680..182951,183057..183200,183286..183816)	Acanthamoeba castellanii str. Neff	14922495
ACA1_228640	CDS	ACA1_228640	NW_004457596.1	183933	184265	D	encoded by transcript ACA1_228640A; uncharacterized protein	183933..184265	Acanthamoeba castellanii str. Neff	14922496
ACA1_228650	CDS	ACA1_228650	NW_004457596.1	184399	185644	R	encoded by transcript ACA1_228650A; uncharacterized protein	complement(join(184399..184482,184562..184721,184824..184897,185028..185158,185242..185370,185461..185644))	Acanthamoeba castellanii str. Neff	14922497
ACA1_228660	CDS	ACA1_228660	NW_004457596.1	185779	187469	R	encoded by transcript ACA1_228660A; DNA-directed RNA polymerase III 34kD-subunit family protein, putative	complement(join(185779..185862,186138..186274,186382..186466,186575..186652,186747..186859,186951..187015,187114..187187,187413..187469))	Acanthamoeba castellanii str. Neff	14922498
ACA1_228670	CDS	ACA1_228670	NW_004457596.1	187577	188361	D	encoded by transcript ACA1_228670A; uncharacterized protein	join(187577..187703,187773..188026,188137..188361)	Acanthamoeba castellanii str. Neff	14922499
ACA1_228680	CDS	ACA1_228680	NW_004457596.1	188590	188965	R	encoded by transcript ACA1_228680A; uncharacterized protein	complement(join(188590..188684,188860..188965))	Acanthamoeba castellanii str. Neff	14922500
ACA1_228690	CDS	ACA1_228690	NW_004457596.1	189527	192021	D	encoded by transcript ACA1_228690A; MORN repeatcontaining protein	join(189527..190311,190509..190602,190753..190820,190907..191037,191132..191192,191279..191341,191453..191511,191612..192021)	Acanthamoeba castellanii str. Neff	14922501
ACA1_228700	CDS	ACA1_228700	NW_004457596.1	192186	193154	D	encoded by transcript ACA1_228700A; uncharacterized protein	join(192186..192608,192630..193154)	Acanthamoeba castellanii str. Neff	14922502
ACA1_228710	CDS	ACA1_228710	NW_004457596.1	193387	195324	R	encoded by transcript ACA1_228710A; DnaJ domain containing protein	complement(join(193387..193475,193570..193692,193765..193984,194101..194233,194332..194563,194695..194868,195072..195324))	Acanthamoeba castellanii str. Neff	14922503
ACA1_228720	CDS	ACA1_228720	NW_004457596.1	195550	197309	D	encoded by transcript ACA1_228720A; BRO1like domain containing protein	join(195550..195972,196061..196202,196283..196361,196427..196517,196594..196689,196768..196893,197031..197102,197211..197309)	Acanthamoeba castellanii str. Neff	14922504
ACA1_228730	CDS	ACA1_228730	NW_004457596.1	197864	203027	D	encoded by transcript ACA1_228730A; ubiquitin domain containing protein	join(197864..198450,198681..198801,198882..198971,199090..199186,199285..201088,201163..201276,201364..202429,202609..202697,202786..202850,202954..203027)	Acanthamoeba castellanii str. Neff	14922505
ACA1_228740	CDS	ACA1_228740	NW_004457596.1	203468	205071	R	encoded by transcript ACA1_228740A; uncharacterized protein	complement(join(203468..203505,203604..203777,203877..203945,204057..204128,204207..204305,204401..204476,204624..204700,204785..204878,204991..205071))	Acanthamoeba castellanii str. Neff	14922506
ACA1_228750	CDS	ACA1_228750	NW_004457596.1	205197	206561	D	encoded by transcript ACA1_228750A; dual specificity phosphatase, catalytic domain containing protein	join(205197..205344,205473..205530,205650..205757,205857..205954,206036..206096,206327..206561)	Acanthamoeba castellanii str. Neff	14922507
ACA1_228760	CDS	ACA1_228760	NW_004457596.1	206748	208777	D	encoded by transcript ACA1_228760A; Mitochondrial carrier protein	join(206748..206817,206943..207043,207124..207190,207275..207319,207407..207487,207605..207702,207790..207829,207925..208041,208143..208247,208350..208564,208685..208777)	Acanthamoeba castellanii str. Neff	14922508
ACA1_228770	CDS	ACA1_228770	NW_004457596.1	208881	213198	D	encoded by transcript ACA1_228770A; PH domain containing protein	join(208881..209127,209271..209379,209458..209578,209654..209730,209816..209951,210056..210148,210212..210315,210413..210954,211037..211145,211224..211344,211436..211488,211580..211715,211812..211883,211949..212052,212165..212413,212505..213198)	Acanthamoeba castellanii str. Neff	14922509
ACA1_228780	CDS	ACA1_228780	NW_004457596.1	213223	213907	R	encoded by transcript ACA1_228780A; nicotinamidase-like amidase	complement(join(213223..213743,213832..213907))	Acanthamoeba castellanii str. Neff	14922510
ACA1_228790	CDS	ACA1_228790	NW_004457596.1	214126	216353	D	encoded by transcript ACA1_228790A; IgA-specific serine endopeptidase	join(214126..214323,214411..214543,214630..214757,214897..216146,216248..216353)	Acanthamoeba castellanii str. Neff	14922511
ACA1_228800	CDS	ACA1_228800	NW_004457596.1	219475	221327	R	encoded by transcript ACA1_228800A; uncharacterized protein	complement(join(219475..219788,219877..220045,220147..220302,220998..221069,221142..221327))	Acanthamoeba castellanii str. Neff	14922512
ACA1_228910	CDS	ACA1_228910	NW_004457596.1	221517	224273	D	encoded by transcript ACA1_228910A; uncharacterized protein	join(221517..221604,221705..221754,221850..221941,222052..222180,222282..222404,222488..222557,222617..222724,222808..223349,223431..223524,223635..224273)	Acanthamoeba castellanii str. Neff	14922513
ACA1_228920	CDS	ACA1_228920	NW_004457596.1	225999	226436	D	encoded by transcript ACA1_228920A; uncharacterized protein	225999..226436	Acanthamoeba castellanii str. Neff	14922514
ACA1_228930	CDS	ACA1_228930	NW_004457596.1	226630	228537	R	encoded by transcript ACA1_228930A; uncharacterized protein	complement(join(226630..226704,226795..227097,227108..227185,227220..227770,227862..227992,228097..228182,228289..228537))	Acanthamoeba castellanii str. Neff	14922515
ACA1_229040	CDS	ACA1_229040	NW_004457596.1	230084	230521	R	encoded by transcript ACA1_229040A; Omethyltransferase family protein	complement(join(230084..230091,230145..230249,230319..230408,230464..230521))	Acanthamoeba castellanii str. Neff	14922516
ACA1_229150	CDS	ACA1_229150	NW_004457596.1	231286	232280	R	encoded by transcript ACA1_229150A; uncharacterized protein	complement(join(231286..231294,231362..231448,231591..231716,231796..232048,232147..232280))	Acanthamoeba castellanii str. Neff	14922517
ACA1_229160	CDS	ACA1_229160	NW_004457596.1	232548	233778	D	encoded by transcript ACA1_229160A; uncharacterized protein	join(232548..232682,232825..233012,233093..233207,233301..233422,233508..233566,233756..233778)	Acanthamoeba castellanii str. Neff	14922518
ACA1_229170	CDS	ACA1_229170	NW_004457596.1	235656	237863	D	encoded by transcript ACA1_229170A; uncharacterized protein	join(235656..237064,237206..237332,237448..237562,237655..237863)	Acanthamoeba castellanii str. Neff	14922519
ACA1_229180	CDS	ACA1_229180	NW_004457596.1	238049	240127	R	encoded by transcript ACA1_229180A; WD repeat protein	complement(join(238049..238115,238193..238355,238441..238526,238653..238711,238801..238916,239018..239167,239285..239366,239456..239601,239707..239826,239926..240127))	Acanthamoeba castellanii str. Neff	14922520
ACA1_229190	CDS	ACA1_229190	NW_004457596.1	240284	241446	D	encoded by transcript ACA1_229190A; MYND finger domain containing protein	join(240284..240382,240540..240650,240755..240967,241047..241251,241310..241446)	Acanthamoeba castellanii str. Neff	14922521
ACA1_229200	CDS	ACA1_229200	NW_004457596.1	241778	242514	R	encoded by transcript ACA1_229200A; Ras-related protein Rab-1A, putative	complement(join(241778..242196,242415..242514))	Acanthamoeba castellanii str. Neff	14922522
ACA1_229210	CDS	ACA1_229210	NW_004457596.1	243071	243664	D	encoded by transcript ACA1_229210A; uncharacterized protein	join(243071..243082,243175..243459,243545..243664)	Acanthamoeba castellanii str. Neff	14922523
ACA1_229230	CDS	ACA1_229230	NW_004457596.1	247169	249161	R	encoded by transcript ACA1_229230A; Mitochondrial carrier protein	complement(join(247169..247497,247595..247774,247854..248055,248156..248262,248396..248540,248630..248839,248922..249161))	Acanthamoeba castellanii str. Neff	14922525
ACA1_229250	CDS	ACA1_229250	NW_004457596.1	250851	251249	D	encoded by transcript ACA1_229250A; uncharacterized protein	250851..251249	Acanthamoeba castellanii str. Neff	14922527
ACA1_229260	CDS	ACA1_229260	NW_004457596.1	251391	255102	R	encoded by transcript ACA1_229260A; glycosyl hydrolase family 47 protein	complement(join(251391..251528,251646..251792,252010..252083,252194..252337,252349..252510,252599..252706,252856..253198,253326..253942,254033..254203,254300..254374,254469..254570,254649..254715,254797..254913,254986..255102))	Acanthamoeba castellanii str. Neff	14922528
ACA1_229370	CDS	ACA1_229370	NW_004457596.1	255682	257013	D	encoded by transcript ACA1_229370A; mitogen-activated protein kinase kinase kinase	join(255682..255719,255803..255901,256210..256327,256430..256546,256630..256803,256882..257013)	Acanthamoeba castellanii str. Neff	14922529
ACA1_229480	CDS	ACA1_229480	NW_004457596.1	258359	258886	D	encoded by transcript ACA1_229480A; uncharacterized protein	258359..258886	Acanthamoeba castellanii str. Neff	14922530
ACA1_229490	CDS	ACA1_229490	NW_004457596.1	259291	260287	D	encoded by transcript ACA1_229490A; uncharacterized protein	join(259291..259611,259692..259928,260000..260287)	Acanthamoeba castellanii str. Neff	14922531
ACA1_229500	CDS	ACA1_229500	NW_004457596.1	260645	262120	D	encoded by transcript ACA1_229500A; homeobox domain containing protein	260645..262120	Acanthamoeba castellanii str. Neff	14922532
ACA1_229510	CDS	ACA1_229510	NW_004457596.1	262254	263455	D	encoded by transcript ACA1_229510A; HemK family modification methylase	join(262254..262333,262410..262512,262578..262669,262764..262897,263024..263168,263268..263375,263404..263455)	Acanthamoeba castellanii str. Neff	14922533
ACA1_229520	CDS	ACA1_229520	NW_004457596.1	263983	266454	D	encoded by transcript ACA1_229520A; protein serine/threonine kinase, putative	join(263983..264086,264371..264383,264506..264545,264657..264688,264778..264873,264946..265087,265180..265309,265391..265514,265622..265759,265852..265968,266053..266226,266323..266454)	Acanthamoeba castellanii str. Neff	14922534
ACA1_229530	CDS	ACA1_229530	NW_004457596.1	267118	271360	D	encoded by transcript ACA1_229530A; diacylglycerol kinase accessory domain (presumed) domain containing protein	join(267118..267654,267743..267862,268080..268199,268285..268359,268453..268629,268730..268874,268984..269073,269176..270606,270727..270900,270971..271093,271161..271360)	Acanthamoeba castellanii str. Neff	14922535
ACA1_229540	CDS	ACA1_229540	NW_004457596.1	271439	272491	R	encoded by transcript ACA1_229540A; HD phosphohydrolase, putative	complement(join(271439..271561,271646..271858,271981..272079,272142..272366,272402..272491))	Acanthamoeba castellanii str. Neff	14922536
ACA1_229550	CDS	ACA1_229550	NW_004457596.1	272909	277275	D	encoded by transcript ACA1_229550A; RUN domain containing protein	join(272909..272960,273104..273250,273357..273409,273521..273640,273751..273903,274066..274135,274226..276140,276324..276849,277129..277275)	Acanthamoeba castellanii str. Neff	14922537
ACA1_229560	CDS	ACA1_229560	NW_004457596.1	277915	279323	R	encoded by transcript ACA1_229560A; MORN repeatcontaining protein	complement(join(277915..278030,278064..278121,278216..278323,278468..278546,278636..278730,278842..279027,279108..>279323))	Acanthamoeba castellanii str. Neff	14922538
ACA1_229570	CDS	ACA1_229570	NW_004457596.1	279707	281295	R	encoded by transcript ACA1_229570A; oxidoreductase, short chain dehydrogenase/reductase superfamily protein	complement(join(279707..279868,279989..280061,280130..280212,280298..280357,280451..280569,280673..280817,280886..280946,281031..281105,281198..281295))	Acanthamoeba castellanii str. Neff	14922539
ACA1_229580	CDS	ACA1_229580	NW_004457596.1	281663	281993	R	encoded by transcript ACA1_229580A; uncharacterized protein	complement(join(281663..281837,281929..281993))	Acanthamoeba castellanii str. Neff	14922540
ACA1_229610	CDS	ACA1_229610	NW_004457596.1	292927	297585	R	encoded by transcript ACA1_229610A; ABC2 type transporter superfamily protein	complement(join(292927..293133,293218..293312,293398..293507,293678..293873,293961..294081,294213..294344,294542..294686,294765..295041,295157..295248,295362..295566,295665..295763,295848..295929,295996..296084,296161..296284,296369..296500,296573..296703,296783..296986,297123..297240,297379..297585))	Acanthamoeba castellanii str. Neff	14922543
ACA1_229620	CDS	ACA1_229620	NW_004457596.1	300281	304030	R	encoded by transcript ACA1_229620A; nucleotidyltransferase domain containing protein	complement(join(300281..300296,300315..300491,300589..301106,301127..301330,301351..301569,301648..301716,301792..301959,302064..302250,302354..302423,302504..303754,303979..304030))	Acanthamoeba castellanii str. Neff	14922544
ACA1_229730	CDS	ACA1_229730	NW_004457596.1	305068	305635	R	encoded by transcript ACA1_229730A; Ras-related GTP-binding protein A, putative	complement(join(305068..305190,305284..305487,305579..305635))	Acanthamoeba castellanii str. Neff	14922545
ACA1_229940	CDS	ACA1_229940	NW_004457596.1	309064	313417	D	encoded by transcript ACA1_229940A; Arf GTPase activating protein, putative	join(309064..309324,309414..309515,309624..309782,309871..310662,310789..310968,311055..311120,311189..311344,311447..311613,311718..311815,311925..312175,312305..312583,312680..312821,312873..313006,313128..313219,313303..313417)	Acanthamoeba castellanii str. Neff	14922546
ACA1_229950	CDS	ACA1_229950	NW_004457596.1	313773	314894	D	encoded by transcript ACA1_229950A; uncharacterized protein	313773..314894	Acanthamoeba castellanii str. Neff	14922547
ACA1_229960	CDS	ACA1_229960	NW_004457596.1	315232	316588	D	encoded by transcript ACA1_229960A; beta1,3-glucanase precursor, putative	join(315232..315414,315514..315612,315686..315760,315850..315996,316023..316288,316399..316588)	Acanthamoeba castellanii str. Neff	14922548
ACA1_229970	CDS	ACA1_229970	NW_004457596.1	317814	319424	D	encoded by transcript ACA1_229970A; uncharacterized protein	join(317814..317907,317982..318020,318088..318155,318404..318483,318557..318789,318815..318990,319080..319223,319359..319424)	Acanthamoeba castellanii str. Neff	14922549
ACA1_230080	CDS	ACA1_230080	NW_004457596.1	320471	323261	D	encoded by transcript ACA1_230080A; RecF/RecN/SMC domain containing protein	join(320471..320564,320636..320674,320759..320807,321093..321153,321236..321484,321586..321886,321968..321993,322190..322657,322752..322883,323019..323261)	Acanthamoeba castellanii str. Neff	14922550
ACA1_230190	CDS	ACA1_230190	NW_004457596.1	323878	326427	D	encoded by transcript ACA1_230190A; RNA recognition motif domain containing protein	join(323878..323992,324121..324192,324291..324441,324637..325268,325332..325474,326199..326261,326350..326427)	Acanthamoeba castellanii str. Neff	14922551
ACA1_230200	CDS	ACA1_230200	NW_004457596.1	326604	327630	R	encoded by transcript ACA1_230200A; uncharacterized protein	complement(join(326604..326620,326717..326857,326949..327106,327134..327234,327370..327630))	Acanthamoeba castellanii str. Neff	14922552
ACA1_230210	CDS	ACA1_230210	NW_004457596.1	328002	329502	D	encoded by transcript ACA1_230210A; phosphatidylinositol transfer protein	join(328002..328229,328450..328524,328597..328752,328928..329029,329125..329502)	Acanthamoeba castellanii str. Neff	14922553
ACA1_230220	CDS	ACA1_230220	NW_004457596.1	329587	330010	R	encoded by transcript ACA1_230220A; uncharacterized protein	complement(join(329587..329742,329825..330010))	Acanthamoeba castellanii str. Neff	14922554
ACA1_230230	CDS	ACA1_230230	NW_004457596.1	331276	331703	D	encoded by transcript ACA1_230230A; uncharacterized protein	join(331276..331434,331500..331703)	Acanthamoeba castellanii str. Neff	14922555
ACA1_230240	CDS	ACA1_230240	NW_004457596.1	331832	333794	R	encoded by transcript ACA1_230240A; calponin domain containing protein	complement(join(331832..331957,332065..332157,332223..333263,333351..333503,333744..333794))	Acanthamoeba castellanii str. Neff	14922556
ACA1_230250	CDS	ACA1_230250	NW_004457596.1	334086	335041	R	encoded by transcript ACA1_230250A; uncharacterized protein	complement(join(334086..334102,334185..334325,334415..334572,334600..334700,334850..335041))	Acanthamoeba castellanii str. Neff	14922557
ACA1_230260	CDS	ACA1_230260	NW_004457596.1	335217	336834	D	encoded by transcript ACA1_230260A; Hypothetical protein	join(335217..335236,335307..335337,335453..335701,335808..335882,335964..336119,336259..336360,336460..336834)	Acanthamoeba castellanii str. Neff	14922558
ACA1_230270	CDS	ACA1_230270	NW_004457596.1	336928	337413	R	encoded by transcript ACA1_230270A; uncharacterized protein	complement(join(336928..337098,337177..337338,337378..337413))	Acanthamoeba castellanii str. Neff	14922559
ACA1_230280	CDS	ACA1_230280	NW_004457596.1	337964	338807	D	encoded by transcript ACA1_230280A; GPI anchored endo1,3(4)-beta-glucanase	join(337964..338000,338106..338197,338367..338440,338526..338633,338732..338807)	Acanthamoeba castellanii str. Neff	14922560
ACA1_230290	CDS	ACA1_230290	NW_004457596.1	338929	339367	D	encoded by transcript ACA1_230290A; uncharacterized protein	join(338929..339087,339164..339367)	Acanthamoeba castellanii str. Neff	14922561
ACA1_230300	CDS	ACA1_230300	NW_004457596.1	339899	341417	D	encoded by transcript ACA1_230300A; uncharacterized protein	join(339899..339916,340041..340175,340273..340375,340745..340958,341062..341126,341284..341417)	Acanthamoeba castellanii str. Neff	14922562
ACA1_230310	CDS	ACA1_230310	NW_004457596.1	342515	344147	D	encoded by transcript ACA1_230310A; uncharacterized protein	join(342515..342605,342688..342958,343056..343197,343295..343386,343488..343602,343746..344147)	Acanthamoeba castellanii str. Neff	14922563
ACA1_230320	CDS	ACA1_230320	NW_004457596.1	344267	344760	R	encoded by transcript ACA1_230320A; CUGbinding protein LYLQ isoform, putative	complement(join(344267..344388,344479..344622,344706..344760))	Acanthamoeba castellanii str. Neff	14922564
ACA1_230430	CDS	ACA1_230430	NW_004457596.1	346516	348068	R	encoded by transcript ACA1_230430A; RNA recognition motif domain containing protein	complement(join(346516..346642,347115..347185,347276..347364,347440..347547,347622..347673,347755..347837,347909..348068))	Acanthamoeba castellanii str. Neff	14922565
ACA1_230440	CDS	ACA1_230440	NW_004457596.1	348370	350803	D	encoded by transcript ACA1_230440A; p21activated protein kinase-interacting protein 1, putative	join(348370..348462,348570..348679,348786..348838,348907..349024,349126..349253,349328..349473,349565..349730,349808..350039,350072..350282,350358..350483,350558..350803)	Acanthamoeba castellanii str. Neff	14922566
ACA1_230450	CDS	ACA1_230450	NW_004457596.1	350917	351885	R	encoded by transcript ACA1_230450A; uncharacterized protein	complement(join(350917..351186,351232..351885))	Acanthamoeba castellanii str. Neff	14922567
ACA1_230460	CDS	ACA1_230460	NW_004457596.1	354068	354785	R	encoded by transcript ACA1_230460A; 2OGFe(II) oxygenase	complement(join(354068..354502,354576..354785))	Acanthamoeba castellanii str. Neff	14922568
ACA1_230470	CDS	ACA1_230470	NW_004457596.1	355536	357244	D	encoded by transcript ACA1_230470A; uncharacterized protein	join(355536..355598,355673..355828,355891..356093,356173..356415,356494..356650,356729..356960,357049..357173,357221..357244)	Acanthamoeba castellanii str. Neff	14922569
ACA1_230490	CDS	ACA1_230490	NW_004457596.1	358899	362410	D	encoded by transcript ACA1_230490A; RFX DNAbinding domain containing protein	join(358899..359071,359372..359460,359581..359706,359960..360356,360444..360583,360671..360797,360900..361025,361120..361242,361319..361740,361853..361963,362082..362410)	Acanthamoeba castellanii str. Neff	14922571
ACA1_230500	CDS	ACA1_230500	NW_004457596.1	362690	365618	D	encoded by transcript ACA1_230500A; ammonium transporter subfamily protein	join(362690..363047,363175..363236,363337..363405,363544..363615,363692..363815,363886..363978,364098..364162,364291..364382,364466..364600,364736..364851,364959..365078,365145..365215,365327..365439,365522..365618)	Acanthamoeba castellanii str. Neff	14922572
ACA1_230510	CDS	ACA1_230510	NW_004457596.1	367135	370051	R	encoded by transcript ACA1_230510A; uncharacterized protein	complement(join(367135..367350,367434..367743,367835..367949,368021..368092,368153..368278,368345..368478,368554..368604,368884..369005,369095..369220,369308..369567,369658..369812,369936..370051))	Acanthamoeba castellanii str. Neff	14922573
ACA1_230520	CDS	ACA1_230520	NW_004457596.1	370436	371944	R	encoded by transcript ACA1_230520A; Hypothetical protein	complement(join(370436..370705,370717..370842,370925..371059,371163..371251,371346..371518,371592..371650,371716..371874,371939..371944))	Acanthamoeba castellanii str. Neff	14922574
ACA1_230530	CDS	ACA1_230530	NW_004457596.1	372109	373709	D	encoded by transcript ACA1_230530A; S(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	join(372109..372175,372255..372440,372535..372813,372885..372976,373054..373234,373309..373502,373587..373709)	Acanthamoeba castellanii str. Neff	14922575
ACA1_230540	CDS	ACA1_230540	NW_004457596.1	374338	375247	D	encoded by transcript ACA1_230540A; uncharacterized protein	join(374338..374608,374682..374692,374705..375247)	Acanthamoeba castellanii str. Neff	14922576
ACA1_230550	CDS	ACA1_230550	NW_004457596.1	376223	376765	R	encoded by transcript ACA1_230550A; uncharacterized protein	complement(join(376223..376361,376437..376765))	Acanthamoeba castellanii str. Neff	14922577
ACA1_230570	CDS	ACA1_230570	NW_004457596.1	378967	382076	R	encoded by transcript ACA1_230570A; uncharacterized protein	complement(join(378967..379087,379159..379321,379411..379563,379649..379766,379882..379992,380101..380193,380331..380409,380586..380667,380764..380831,381022..381092,381164..381256,381344..381401,381493..381766,381875..382076))	Acanthamoeba castellanii str. Neff	14922579
ACA1_230580	CDS	ACA1_230580	NW_004457596.1	382244	385070	R	encoded by transcript ACA1_230580A; uncharacterized protein	complement(join(382244..382347,382592..382763,382886..383042,383205..383280,383365..383525,383598..383698,383769..383861,383979..384090,384187..384258,384772..384871,384977..385070))	Acanthamoeba castellanii str. Neff	14922580
ACA1_230790	CDS	ACA1_230790	NW_004457596.1	385242	386485	D	encoded by transcript ACA1_230790A; uncharacterized protein	join(385242..386347,386380..386485)	Acanthamoeba castellanii str. Neff	14922581
ACA1_230800	CDS	ACA1_230800	NW_004457596.1	387147	389103	D	encoded by transcript ACA1_230800A; phosphoenolpyruvate carboxykinase	join(387147..387346,387531..387734,387835..388068,388426..388702,388862..388879,388957..389103)	Acanthamoeba castellanii str. Neff	14922582
ACA1_231010	CDS	ACA1_231010	NW_004457596.1	389788	391128	D	encoded by transcript ACA1_231010A; phosphoenolpyruvate carboxykinase	join(389788..389885,389972..390588,390653..391128)	Acanthamoeba castellanii str. Neff	14922583
ACA1_231120	CDS	ACA1_231120	NW_004457596.1	393521	394874	D	encoded by transcript ACA1_231120A; uncharacterized protein	join(393521..393674,393741..394022,394055..394401,394649..394753,394821..394874)	Acanthamoeba castellanii str. Neff	14922584
ACA1_231130	CDS	ACA1_231130	NW_004457596.1	402155	402712	D	encoded by transcript ACA1_231130A; uncharacterized protein	join(402155..402247,402536..402712)	Acanthamoeba castellanii str. Neff	14922585
ACA1_231140	CDS	ACA1_231140	NW_004457596.1	407993	408513	R	encoded by transcript ACA1_231140A; uncharacterized protein	complement(join(407993..408273,408396..408513))	Acanthamoeba castellanii str. Neff	14922586
ACA1_231150	CDS	ACA1_231150	NW_004457596.1	409316	410127	R	encoded by transcript ACA1_231150A; uncharacterized protein	complement(join(409316..409398,409930..410023,410092..410127))	Acanthamoeba castellanii str. Neff	14922587
ACA1_231260	CDS	ACA1_231260	NW_004457596.1	413852	415728	D	encoded by transcript ACA1_231260A; uncharacterized protein	join(413852..413956,414109..414198,414373..414510,414614..414833,414967..415035,415370..415728)	Acanthamoeba castellanii str. Neff	14922588
ACA1_231270	CDS	ACA1_231270	NW_004457596.1	416763	417070	D	encoded by transcript ACA1_231270A; phosphoenolpyruvate carboxykinase [atp], putative	join(416763..416847,416967..417070)	Acanthamoeba castellanii str. Neff	14922589
ACA1_231280	CDS	ACA1_231280	NW_004457596.1	417098	417379	D	encoded by transcript ACA1_231280A; phosphoenolpyruvate carboxykinase [atp] 1, putative	417098..417379	Acanthamoeba castellanii str. Neff	14922590
ACA1_231390	CDS	ACA1_231390	NW_004457596.1	418336	418584	R	encoded by transcript ACA1_231390A; uncharacterized protein	complement(join(418336..418399,418466..418584))	Acanthamoeba castellanii str. Neff	14922591
ACA1_231400	CDS	ACA1_231400	NW_004457596.1	421944	422781	R	encoded by transcript ACA1_231400A; uncharacterized protein	complement(join(421944..421989,422089..422204,422761..422781))	Acanthamoeba castellanii str. Neff	14922592
ACA1_231410	CDS	ACA1_231410	NW_004457596.1	425970	426893	D	encoded by transcript ACA1_231410A; pol polyprotein	join(425970..426068,426126..426281,426630..426678,426859..426893)	Acanthamoeba castellanii str. Neff	14922593
ACA1_231420	CDS	ACA1_231420	NW_004457596.1	427313	427654	R	encoded by transcript ACA1_231420A; uncharacterized protein	complement(join(427313..427475,427593..427654))	Acanthamoeba castellanii str. Neff	14922594
ACA1_231430	CDS	ACA1_231430	NW_004457596.1	428667	430716	D	encoded by transcript ACA1_231430A; uncharacterized protein	join(<428667..429215,429486..429719,430047..430255,430521..430716)	Acanthamoeba castellanii str. Neff	14922595
ACA1_231440	CDS	ACA1_231440	NW_004457596.1	437531	437975	R	encoded by transcript ACA1_231440A; uncharacterized protein	complement(join(437531..437903,437956..437975))	Acanthamoeba castellanii str. Neff	14922596
ACA1_231550	CDS	ACA1_231550	NW_004457596.1	438323	439406	D	encoded by transcript ACA1_231550A; hydrolase, NUDIX domain containing protein	join(438323..438342,438739..439027,439161..439178,439260..439406)	Acanthamoeba castellanii str. Neff	14922597
ACA1_231560	CDS	ACA1_231560	NW_004457596.1	439817	440644	D	encoded by transcript ACA1_231560A; uncharacterized protein	join(439817..439822,440054..440122,440189..440374,440439..440507,440594..440644)	Acanthamoeba castellanii str. Neff	14922598
ACA1_231570	CDS	ACA1_231570	NW_004457596.1	441619	443026	D	encoded by transcript ACA1_231570A; uncharacterized protein	join(441619..441655,441838..442544,442612..442716,442813..442917,442973..443026)	Acanthamoeba castellanii str. Neff	14922599
ACA1_231580	CDS	ACA1_231580	NW_004457596.1	443496	443978	R	encoded by transcript ACA1_231580A; uncharacterized protein	complement(443496..443978)	Acanthamoeba castellanii str. Neff	14922600
ACA1_231690	CDS	ACA1_231690	NW_004457596.1	444954	445366	R	encoded by transcript ACA1_231690A; uncharacterized protein	complement(join(444954..445154,445229..445366))	Acanthamoeba castellanii str. Neff	14922601
ACA1_231800	CDS	ACA1_231800	NW_004457596.1	446450	446916	R	encoded by transcript ACA1_231800A; uncharacterized protein	complement(join(446450..446459,446561..446916))	Acanthamoeba castellanii str. Neff	14922602
ACA1_231810	CDS	ACA1_231810	NW_004457596.1	447077	447722	D	encoded by transcript ACA1_231810A; uncharacterized protein	join(447077..447239,447366..447468,447542..447722)	Acanthamoeba castellanii str. Neff	14922603
ACA1_231820	CDS	ACA1_231820	NW_004457596.1	448610	449718	D	encoded by transcript ACA1_231820A; uncharacterized protein	join(448610..448668,449216..449338,449688..449718)	Acanthamoeba castellanii str. Neff	14922604
ACA1_231930	CDS	ACA1_231930	NW_004457596.1	452909	454305	R	encoded by transcript ACA1_231930A; TPR repeat-containing protein	complement(join(<452909..453162,453242..453357,453484..453599,453707..453851,453933..454065,454221..454305))	Acanthamoeba castellanii str. Neff	14922605
ACA1_079560	CDS	ACA1_079560	NW_004457595.1	15	1154	R	encoded by transcript ACA1_079560A; NAD dependent epimerase/dehydratase family protein	complement(join(15..452,522..628,699..852,1080..1154))	Acanthamoeba castellanii str. Neff	14922416
ACA1_079570	CDS	ACA1_079570	NW_004457595.1	1555	1832	R	encoded by transcript ACA1_079570A; uncharacterized protein	complement(join(1555..1644,1671..1832))	Acanthamoeba castellanii str. Neff	14922417
ACA1_079580	CDS	ACA1_079580	NW_004457595.1	2683	3504	R	encoded by transcript ACA1_079580A; uncharacterized protein	complement(join(2683..2907,2962..3030,3061..3173,3323..3333,3380..>3504))	Acanthamoeba castellanii str. Neff	14922418
ACA1_079690	CDS	ACA1_079690	NW_004457595.1	9772	11556	R	encoded by transcript ACA1_079690A; papain family cysteine protease subfamily protein	complement(join(9772..10394,10460..10564,10640..10781,11037..11226,11237..11556))	Acanthamoeba castellanii str. Neff	14922409
ACA1_079700	CDS	ACA1_079700	NW_004457595.1	12524	13285	D	encoded by transcript ACA1_079700A; uncharacterized protein	join(12524..12778,13076..13285)	Acanthamoeba castellanii str. Neff	14922410
ACA1_079710	CDS	ACA1_079710	NW_004457595.1	13909	14171	D	encoded by transcript ACA1_079710A; uncharacterized protein	13909..>14171	Acanthamoeba castellanii str. Neff	14922411
ACA1_079720	CDS	ACA1_079720	NW_004457595.1	15109	17045	D	encoded by transcript ACA1_079720A; reverse transcriptase	join(15109..15255,15280..15690,15714..16041,16428..16747,16971..17045)	Acanthamoeba castellanii str. Neff	14922412
ACA1_079730	CDS	ACA1_079730	NW_004457595.1	17232	17706	R	encoded by transcript ACA1_079730A; uncharacterized protein	complement(join(17232..17486,17569..17706))	Acanthamoeba castellanii str. Neff	14922413
ACA1_079740	CDS	ACA1_079740	NW_004457595.1	20200	20373	D	encoded by transcript ACA1_079740A; uncharacterized protein	20200..20373	Acanthamoeba castellanii str. Neff	14922414
ACA1_079950	CDS	ACA1_079950	NW_004457595.1	27736	28053	D	encoded by transcript ACA1_079950A; uncharacterized protein	join(27736..27754,27881..28053)	Acanthamoeba castellanii str. Neff	14922415
ACA1_327900	CDS	ACA1_327900	NW_004457594.1	74	1658	D	encoded by transcript ACA1_327900A; Poly(ADPribose) polymerase catalytic domain containing protein	join(74..461,583..732,793..921,1002..1151,1265..1323,1443..1658)	Acanthamoeba castellanii str. Neff	14922408
ACA1_327910	CDS	ACA1_327910	NW_004457594.1	1779	2080	R	encoded by transcript ACA1_327910A; uncharacterized protein	complement(join(1779..1910,2009..2080))	Acanthamoeba castellanii str. Neff	14922399
ACA1_327920	CDS	ACA1_327920	NW_004457594.1	3499	9005	R	encoded by transcript ACA1_327920A; Lecithin:cholesterol acyltransferase	complement(join(3499..3587,3689..3850,3943..4066,4146..4234,4304..4379,4479..4739,4874..4979,5037..5197,5291..5386,5484..5549,5653..5721,5802..5906,6020..6157,6274..6331,6425..6527,6640..6822,6925..7054,7172..7298,7392..7525,7608..7736,7836..7920,8029..8152,8240..8300,8427..8597,8751..8827,8933..9005))	Acanthamoeba castellanii str. Neff	14922404
ACA1_327930	CDS	ACA1_327930	NW_004457594.1	9532	10208	D	encoded by transcript ACA1_327930A; cyst specific protein CSP 21, putative	join(9532..9822,9916..10052,10115..10208)	Acanthamoeba castellanii str. Neff	14922405
ACA1_327940	CDS	ACA1_327940	NW_004457594.1	10322	10657	R	encoded by transcript ACA1_327940A; uncharacterized protein	complement(join(10322..10488,10576..10657))	Acanthamoeba castellanii str. Neff	14922406
ACA1_327950	CDS	ACA1_327950	NW_004457594.1	10803	11121	D	encoded by transcript ACA1_327950A; uncharacterized protein	join(10803..11026,11094..11121)	Acanthamoeba castellanii str. Neff	14922407
ACA1_328060	CDS	ACA1_328060	NW_004457594.1	12444	13996	R	encoded by transcript ACA1_328060A; uncharacterized protein	complement(join(12444..12545,12618..12756,12828..12964,13029..13095,13178..13266,13338..13430,13498..13592,13678..13996))	Acanthamoeba castellanii str. Neff	14922402
ACA1_328070	CDS	ACA1_328070	NW_004457594.1	14111	14764	R	encoded by transcript ACA1_328070A; uncharacterized protein	complement(14111..14764)	Acanthamoeba castellanii str. Neff	14922403
ACA1_328080	CDS	ACA1_328080	NW_004457594.1	15040	16287	R	encoded by transcript ACA1_328080A; Rab GTPase, putative	complement(join(15040..15129,15209..15264,15331..15448,15538..15609,15693..15777,15861..15894,15970..16158,16245..16287))	Acanthamoeba castellanii str. Neff	14922400
ACA1_328090	CDS	ACA1_328090	NW_004457594.1	16568	18073	D	encoded by transcript ACA1_328090A; Filamin repeat domain containing protein	join(16568..16690,16766..17247,17329..17449,17513..17663,17730..17848,17918..18073)	Acanthamoeba castellanii str. Neff	14922401
ACA1_181380	CDS	ACA1_181380	NW_004457592.1	822	1194	D	encoded by transcript ACA1_181380A; uncharacterized protein	join(822..905,973..1194)	Acanthamoeba castellanii str. Neff	14922398
ACA1_181390	CDS	ACA1_181390	NW_004457592.1	1639	1987	D	encoded by transcript ACA1_181390A; uncharacterized protein	join(1639..1767,1928..1987)	Acanthamoeba castellanii str. Neff	14922147
ACA1_181400	CDS	ACA1_181400	NW_004457592.1	2038	3676	R	encoded by transcript ACA1_181400A; uncharacterized protein	complement(join(2038..2151,2232..2316,2419..2859,2939..3026,3168..3237,3332..3529,3611..3676))	Acanthamoeba castellanii str. Neff	14922148
ACA1_181510	CDS	ACA1_181510	NW_004457592.1	6123	6473	R	encoded by transcript ACA1_181510A; uncharacterized protein	complement(join(<6123..6166,6198..6271,6356..>6473))	Acanthamoeba castellanii str. Neff	14922170
ACA1_181520	CDS	ACA1_181520	NW_004457592.1	6755	7866	D	encoded by transcript ACA1_181520A; cathepsin L, putative	join(6755..7207,7321..7866)	Acanthamoeba castellanii str. Neff	14922171
ACA1_181530	CDS	ACA1_181530	NW_004457592.1	8066	8681	R	encoded by transcript ACA1_181530A; translocase of the inner mitochondrial membrane 14 isoform a, putative	complement(join(8066..8145,8242..8306,8423..8519,8630..8681))	Acanthamoeba castellanii str. Neff	14922172
ACA1_181540	CDS	ACA1_181540	NW_004457592.1	9016	10234	D	encoded by transcript ACA1_181540A; uncharacterized protein	join(9016..9159,9256..9354,9457..9528,9689..9764,9837..9949,10043..10234)	Acanthamoeba castellanii str. Neff	14922173
ACA1_181550	CDS	ACA1_181550	NW_004457592.1	12126	14256	D	encoded by transcript ACA1_181550A; uncharacterized protein	join(12126..12458,12557..13739,13810..13868,13936..14047,14195..14256)	Acanthamoeba castellanii str. Neff	14922174
ACA1_181560	CDS	ACA1_181560	NW_004457592.1	14343	17493	D	encoded by transcript ACA1_181560A; uncharacterized protein	join(14343..14391,14537..14705,14781..14871,14970..15293,15493..17197,17300..17493)	Acanthamoeba castellanii str. Neff	14922175
ACA1_181570	CDS	ACA1_181570	NW_004457592.1	17937	18983	D	encoded by transcript ACA1_181570A; uncharacterized protein	join(17937..18611,18681..18983)	Acanthamoeba castellanii str. Neff	14922176
ACA1_181580	CDS	ACA1_181580	NW_004457592.1	19334	20902	R	encoded by transcript ACA1_181580A; THUMP domain containing protein	complement(join(19334..19441,19501..19566,19647..19721,19808..19931,20001..20109,20180..20462,20583..20693,20777..20902))	Acanthamoeba castellanii str. Neff	14922177
ACA1_181590	CDS	ACA1_181590	NW_004457592.1	21025	25195	D	encoded by transcript ACA1_181590A; acylCoenzyme A dehydrogenase family, member 10 isoform 7, putative	join(21025..21138,21263..21355,21437..21475,21549..21634,21713..21778,21854..21950,22029..22176,22258..22407,22724..22859,22934..23049,23117..23328,23432..23529,23639..23881,23960..24029,24119..24175,24271..24418,24515..24711,24864..24971,25049..25195)	Acanthamoeba castellanii str. Neff	14922178
ACA1_181600	CDS	ACA1_181600	NW_004457592.1	25259	25673	D	encoded by transcript ACA1_181600A; diazepam binding inhibitor isoform 1, putative	join(25259..25457,25525..25673)	Acanthamoeba castellanii str. Neff	14922179
ACA1_181610	CDS	ACA1_181610	NW_004457592.1	25899	27705	R	encoded by transcript ACA1_181610A; electron transport SCO1/SenC family protein	complement(join(25899..25943,26087..26221,26349..26452,26567..26665,26778..26866,26944..27046,27203..27401,27544..27705))	Acanthamoeba castellanii str. Neff	14922180
ACA1_181620	CDS	ACA1_181620	NW_004457592.1	28086	29353	D	encoded by transcript ACA1_181620A; uncharacterized protein	join(28086..28206,28540..28784,28866..28935,28959..29010,29050..29353)	Acanthamoeba castellanii str. Neff	14922181
ACA1_181630	CDS	ACA1_181630	NW_004457592.1	29609	31569	D	encoded by transcript ACA1_181630A; uncharacterized protein	join(29609..29643,29725..29811,29932..30150,30237..30306,30423..30506,30596..30719,30777..30880,30993..31077,31157..31240,31331..31569)	Acanthamoeba castellanii str. Neff	14922182
ACA1_181640	CDS	ACA1_181640	NW_004457592.1	31666	34081	D	encoded by transcript ACA1_181640A; uncharacterized protein	join(31666..31798,31890..32040,32148..32258,32346..32468,32593..32662,32748..32962,33045..33178,33272..33391,33484..33557,33633..33695,33788..34081)	Acanthamoeba castellanii str. Neff	14922149
ACA1_181650	CDS	ACA1_181650	NW_004457592.1	34164	34693	D	encoded by transcript ACA1_181650A; uncharacterized protein	join(34164..34245,34345..34446,34512..34583,34683..34693)	Acanthamoeba castellanii str. Neff	14922150
ACA1_181660	CDS	ACA1_181660	NW_004457592.1	34763	36109	D	encoded by transcript ACA1_181660A; jumonji domain containing 7 family protein	join(34763..34811,35002..35066,35131..35224,35300..35385,35455..35543,35634..35714,35789..35881,35947..35986,36059..36109)	Acanthamoeba castellanii str. Neff	14922151
ACA1_181670	CDS	ACA1_181670	NW_004457592.1	36423	37828	D	encoded by transcript ACA1_181670A; uncharacterized protein	join(36423..36533,36632..36701,36835..36922,37002..37457,37550..37634,37715..37828)	Acanthamoeba castellanii str. Neff	14922152
ACA1_181680	CDS	ACA1_181680	NW_004457592.1	38692	39249	R	encoded by transcript ACA1_181680A; histidine kinase A family protein	complement(join(38692..38731,38811..39017,39164..39249))	Acanthamoeba castellanii str. Neff	14922153
ACA1_181690	CDS	ACA1_181690	NW_004457592.1	39569	41634	R	encoded by transcript ACA1_181690A; uncharacterized protein	complement(join(39569..40387,40408..41634))	Acanthamoeba castellanii str. Neff	14922154
ACA1_181700	CDS	ACA1_181700	NW_004457592.1	46500	46829	D	encoded by transcript ACA1_181700A; uncharacterized protein	join(46500..46540,46652..46829)	Acanthamoeba castellanii str. Neff	14922155
ACA1_181710	CDS	ACA1_181710	NW_004457592.1	47201	47482	R	encoded by transcript ACA1_181710A; uncharacterized protein	complement(47201..47482)	Acanthamoeba castellanii str. Neff	14922156
ACA1_181830	CDS	ACA1_181830	NW_004457592.1	51496	56168	R	encoded by transcript ACA1_181830A; Phosphatidylinositol4 phosphate 5-kinase, putative	complement(join(51496..51553,51736..51816,51928..52451,52565..52678,52779..52844,52966..53133,53254..53503,53578..53716,53800..54159,54246..54986,55135..56017,56148..56168))	Acanthamoeba castellanii str. Neff	14922158
ACA1_181840	CDS	ACA1_181840	NW_004457592.1	56776	58252	R	encoded by transcript ACA1_181840A; Ras subfamily protein	complement(join(56776..56793,56935..57126,57218..57364,57445..57545,57883..58252))	Acanthamoeba castellanii str. Neff	14922159
ACA1_181850	CDS	ACA1_181850	NW_004457592.1	59363	60304	D	encoded by transcript ACA1_181850A; uncharacterized protein	59363..60304	Acanthamoeba castellanii str. Neff	14922160
ACA1_181860	CDS	ACA1_181860	NW_004457592.1	60405	61523	R	encoded by transcript ACA1_181860A; uncharacterized protein	complement(join(60405..60617,60661..60696,60998..61255,61503..61523))	Acanthamoeba castellanii str. Neff	14922161
ACA1_181870	CDS	ACA1_181870	NW_004457592.1	61828	64118	D	encoded by transcript ACA1_181870A; betatransducin repeat containing protein, putative	join(61828..62074,62205..62377,62436..62778,62881..63016,63125..63238,63412..63564,63719..63834,63973..64118)	Acanthamoeba castellanii str. Neff	14922162
ACA1_181890	CDS	ACA1_181890	NW_004457592.1	66339	69034	R	encoded by transcript ACA1_181890A; Fbox domain containing protein	complement(join(66339..66483,66560..66732,66815..66867,66940..67050,67176..67304,67563..67670,67868..68076,68138..68274,68531..68604,68674..68803,68864..69034))	Acanthamoeba castellanii str. Neff	14922164
ACA1_181900	CDS	ACA1_181900	NW_004457592.1	69149	69764	R	encoded by transcript ACA1_181900A; uncharacterized protein	complement(join(69149..69270,69341..69439,69514..69685,69756..69764))	Acanthamoeba castellanii str. Neff	14922165
ACA1_181910	CDS	ACA1_181910	NW_004457592.1	69988	72337	R	encoded by transcript ACA1_181910A; CrcB family protein	complement(join(69988..70018,70109..70221,70305..70401,70476..70597,70667..70709,70790..70883,70977..71070,71134..71229,71290..71362,71423..71534,71613..71730,71817..71929,72003..72043,72123..72337))	Acanthamoeba castellanii str. Neff	14922166
ACA1_181920	CDS	ACA1_181920	NW_004457592.1	72632	72844	R	encoded by transcript ACA1_181920A; uncharacterized protein	complement(72632..>72844)	Acanthamoeba castellanii str. Neff	14922167
ACA1_181930	CDS	ACA1_181930	NW_004457592.1	73523	80665	D	encoded by transcript ACA1_181930A; GRAM domain containing protein	join(73523..73531,73564..73915,74000..74065,74157..74275,74358..74453,74537..74614,74685..74805,74871..74911,75000..75077,75161..75274,75360..75434,75591..75622,75708..75819,75894..76039,76100..76254,76334..76451,76521..76722,76788..76971,77045..77237,77324..77370,77485..77542,77615..78368,78480..78601,78664..78706,78803..78978,79071..79200,79277..79465,79634..79703,79802..79878,79981..80124,80222..80485,80591..80665)	Acanthamoeba castellanii str. Neff	14922168
ACA1_181940	CDS	ACA1_181940	NW_004457592.1	81206	89223	D	encoded by transcript ACA1_181940A; phosphoinositide 3kinase family, accessory domain (pik domain) domain containing protein	join(81206..81775,81857..82711,82866..82970,83061..83204,83332..83512,83582..83748,83843..83965,84192..84358,84510..84611,84729..84903,85010..85107,85227..85329,85413..85691,85809..85910,86012..86495,86577..86694,86796..86973,87188..87295,87418..87591,87704..87906,88032..88155,88276..88387,88485..88604,88745..88962,89035..89223)	Acanthamoeba castellanii str. Neff	14922169
ACA1_181950	CDS	ACA1_181950	NW_004457592.1	89759	90642	D	encoded by transcript ACA1_181950A; uncharacterized protein	join(<89759..89862,89947..90148,90260..90330,90429..90642)	Acanthamoeba castellanii str. Neff	14922183
ACA1_181960	CDS	ACA1_181960	NW_004457592.1	90802	92660	D	encoded by transcript ACA1_181960A; autophagy protein, putative	join(90802..90943,91009..91173,91260..91373,91551..91645,91764..91853,92009..92143,92211..92418,92551..92660)	Acanthamoeba castellanii str. Neff	14922184
ACA1_181970	CDS	ACA1_181970	NW_004457592.1	93628	94353	R	encoded by transcript ACA1_181970A; ribosomal protein S17, putative	complement(join(93628..94131,94351..94353))	Acanthamoeba castellanii str. Neff	14922185
ACA1_181980	CDS	ACA1_181980	NW_004457592.1	94866	97728	D	encoded by transcript ACA1_181980A; vacuolar protein sorting 33	join(94866..95032,95173..95255,95343..95464,95540..95647,95738..95920,95988..96129,96195..96268,96373..96456,96566..96643,96741..96831,96928..97002,97090..97253,97385..97551,97635..97728)	Acanthamoeba castellanii str. Neff	14922186
ACA1_181990	CDS	ACA1_181990	NW_004457592.1	97827	98701	D	encoded by transcript ACA1_181990A; uncharacterized protein	join(97827..97949,98036..98102,98209..98505,98622..98701)	Acanthamoeba castellanii str. Neff	14922187
ACA1_182000	CDS	ACA1_182000	NW_004457592.1	98841	101514	D	encoded by transcript ACA1_182000A; uracilDNA glycosylase	join(98841..99126,99210..99323,99421..99508,99613..99730,99844..99917,100170..100352,100513..100603,100685..100787,100875..100991,101093..101514)	Acanthamoeba castellanii str. Neff	14922188
ACA1_182010	CDS	ACA1_182010	NW_004457592.1	101671	103226	R	encoded by transcript ACA1_182010A; uncharacterized protein	complement(join(101671..102327,102494..102547,102615..102911,102990..103226))	Acanthamoeba castellanii str. Neff	14922189
ACA1_182020	CDS	ACA1_182020	NW_004457592.1	104358	105165	D	encoded by transcript ACA1_182020A; uncharacterized protein	join(104358..104562,104690..105165)	Acanthamoeba castellanii str. Neff	14922190
ACA1_182030	CDS	ACA1_182030	NW_004457592.1	105510	111171	R	encoded by transcript ACA1_182030A; enoylCoA hydratase/isomerase family domain containing protein	complement(join(105510..105803,105927..106095,106208..106336,106459..106783,106851..107076,107164..107798,107911..108064,108185..108407,108558..108684,108767..108893,108997..109124,109227..109349,109460..109599,109711..109906,110037..110165,110281..110368,110542..110655,110842..111171))	Acanthamoeba castellanii str. Neff	14922191
ACA1_182040	CDS	ACA1_182040	NW_004457592.1	111283	116187	R	encoded by transcript ACA1_182040A; uncharacterized protein	complement(join(111283..111555,111656..111892,112035..112233,112335..112559,112669..112853,112948..113049,113176..113517,113593..113759,113873..114030,114121..114195,114264..114391,114577..114684,114817..114908,115038..115255,115375..115544,115628..115746,115853..115988,116062..116187))	Acanthamoeba castellanii str. Neff	14922192
ACA1_182050	CDS	ACA1_182050	NW_004457592.1	116313	116498	R	encoded by transcript ACA1_182050A; uncharacterized protein	complement(116313..116498)	Acanthamoeba castellanii str. Neff	14922193
ACA1_182060	CDS	ACA1_182060	NW_004457592.1	116801	117832	D	encoded by transcript ACA1_182060A; uncharacterized protein	116801..117832	Acanthamoeba castellanii str. Neff	14922194
ACA1_182070	CDS	ACA1_182070	NW_004457592.1	117910	118657	R	encoded by transcript ACA1_182070A; uncharacterized protein	complement(join(117910..117974,118092..118263,118338..118376,118436..118480,118637..118657))	Acanthamoeba castellanii str. Neff	14922195
ACA1_182080	CDS	ACA1_182080	NW_004457592.1	119323	123087	R	encoded by transcript ACA1_182080A; PX domain containing protein	complement(join(119323..119740,119834..120004,120082..120245,120348..120572,120650..120729,120827..121975,122130..123087))	Acanthamoeba castellanii str. Neff	14922196
ACA1_182090	CDS	ACA1_182090	NW_004457592.1	123476	126167	R	encoded by transcript ACA1_182090A; BTB/POZ domain containing protein	complement(join(123476..123911,123981..124698,124796..124895,125014..125115,125146..125263,125394..125483,125582..125735,125855..126167))	Acanthamoeba castellanii str. Neff	14922197
ACA1_182100	CDS	ACA1_182100	NW_004457592.1	126644	127467	D	encoded by transcript ACA1_182100A; ribosomal protein L22 family protein	join(126644..126818,126905..126992,127079..127118,127225..127467)	Acanthamoeba castellanii str. Neff	14922198
ACA1_182110	CDS	ACA1_182110	NW_004457592.1	127767	130272	D	encoded by transcript ACA1_182110A; MethylcrotonoylCoA carboxylase beta chain, mitochondrial, putative	join(127767..128043,128160..128244,128343..128441,128585..128825,128991..129449,129592..129687,129712..129767,129851..130036,130116..130272)	Acanthamoeba castellanii str. Neff	14922199
ACA1_182120	CDS	ACA1_182120	NW_004457592.1	131273	133814	D	encoded by transcript ACA1_182120A; WD repeat domain 5B, putative	join(131273..131412,131474..131700,131796..131845,131970..132080,132210..132340,132407..132565,132680..132885,132978..133133,133198..133276,133366..133465,133568..133681,133779..133814)	Acanthamoeba castellanii str. Neff	14922200
ACA1_182130	CDS	ACA1_182130	NW_004457592.1	133905	137871	R	encoded by transcript ACA1_182130A; uncharacterized protein	complement(join(133905..134015,134068..134243,134304..134436,134563..134759,134877..134994,135056..135228,135323..135440,135676..135776,136106..136202,136318..136432,136519..136604,136717..136816,136929..137537,137774..137871))	Acanthamoeba castellanii str. Neff	14922201
ACA1_182140	CDS	ACA1_182140	NW_004457592.1	139079	140257	D	encoded by transcript ACA1_182140A; uncharacterized protein	join(139079..139396,139503..139619,139743..139828,139942..140056,140150..140257)	Acanthamoeba castellanii str. Neff	14922202
ACA1_182150	CDS	ACA1_182150	NW_004457592.1	141174	142791	D	encoded by transcript ACA1_182150A; uncharacterized protein	join(141174..141640,141727..141835,141964..142049,142131..142242,142323..142513,142566..142791)	Acanthamoeba castellanii str. Neff	14922203
ACA1_182160	CDS	ACA1_182160	NW_004457592.1	143499	145444	D	encoded by transcript ACA1_182160A; uncharacterized protein	join(143499..143882,144015..144205,144292..144394,144521..144606,144718..144835,144920..145444)	Acanthamoeba castellanii str. Neff	14922204
ACA1_182170	CDS	ACA1_182170	NW_004457592.1	145601	147529	D	encoded by transcript ACA1_182170A; uncharacterized protein	join(145601..145695,146054..146491,146644..146743,146825..146907,147082..147160,147251..147529)	Acanthamoeba castellanii str. Neff	14922205
ACA1_182180	CDS	ACA1_182180	NW_004457592.1	147511	149249	R	encoded by transcript ACA1_182180A; uncharacterized protein	complement(join(147511..147523,147625..147777,147922..148215,148284..148363,148440..149061,149212..149249))	Acanthamoeba castellanii str. Neff	14922206
ACA1_182190	CDS	ACA1_182190	NW_004457592.1	149817	151113	R	encoded by transcript ACA1_182190A; uncharacterized protein	complement(join(149817..150095,150134..150193,150311..150428,150513..150598,150675..150783,150801..150814,150859..151113))	Acanthamoeba castellanii str. Neff	14922207
ACA1_182200	CDS	ACA1_182200	NW_004457592.1	154507	156336	D	encoded by transcript ACA1_182200A; potassium channel beta 2 subunit isoform 1, putative	join(154507..154632,154754..154919,155018..155119,155204..155301,155441..155547,155666..155868,155945..156033,156163..156336)	Acanthamoeba castellanii str. Neff	14922208
ACA1_182210	CDS	ACA1_182210	NW_004457592.1	156987	158800	D	encoded by transcript ACA1_182210A; uncharacterized protein	join(156987..157038,157157..157178,157232..157618,157654..157765,157941..158134,158269..158371,158470..158555,158647..158800)	Acanthamoeba castellanii str. Neff	14922209
ACA1_182230	CDS	ACA1_182230	NW_004457592.1	160497	162693	R	encoded by transcript ACA1_182230A; thioredoxin domain containing protein	complement(join(160497..160694,160767..160842,160928..161004,161092..161306,161401..161478,161539..161617,161716..161802,161911..162018,162125..162160,162303..162347,162422..162547,162616..162693))	Acanthamoeba castellanii str. Neff	14922211
ACA1_182240	CDS	ACA1_182240	NW_004457592.1	163004	163527	D	encoded by transcript ACA1_182240A; uncharacterized protein	join(163004..163070,163159..163289,163372..163527)	Acanthamoeba castellanii str. Neff	14922212
ACA1_182250	CDS	ACA1_182250	NW_004457592.1	163626	164877	R	encoded by transcript ACA1_182250A; uncharacterized protein	complement(join(163626..163978,164146..164484,164583..164720,164799..164877))	Acanthamoeba castellanii str. Neff	14922213
ACA1_182260	CDS	ACA1_182260	NW_004457592.1	164965	167175	R	encoded by transcript ACA1_182260A; SAM domain (Sterile alpha motif) domain containing protein	complement(join(164965..165120,165207..165367,165455..165588,165719..165776,165847..166035,166134..166328,166429..166605,166673..166771,166872..167175))	Acanthamoeba castellanii str. Neff	14922214
ACA1_182270	CDS	ACA1_182270	NW_004457592.1	167542	167986	R	encoded by transcript ACA1_182270A; uncharacterized protein	complement(join(167542..167571,167795..167986))	Acanthamoeba castellanii str. Neff	14922215
ACA1_182280	CDS	ACA1_182280	NW_004457592.1	169917	172070	R	encoded by transcript ACA1_182280A; RNA recognition motif domain containing protein	complement(join(169917..169987,170062..170434,170488..170651,170845..171247,171361..171472,171588..171684,171788..172070))	Acanthamoeba castellanii str. Neff	14922216
ACA1_182290	CDS	ACA1_182290	NW_004457592.1	172495	173329	D	encoded by transcript ACA1_182290A; uncharacterized protein	join(172495..172551,172631..172743,172839..172989,173132..173329)	Acanthamoeba castellanii str. Neff	14922217
ACA1_182300	CDS	ACA1_182300	NW_004457592.1	173660	178902	D	encoded by transcript ACA1_182300A; uncharacterized protein	join(173660..173721,173808..173852,173993..174171,174262..174451,174572..174974,175046..176400,176486..176763,176838..177362,177454..177722,177798..178562,178702..178902)	Acanthamoeba castellanii str. Neff	14922218
ACA1_182310	CDS	ACA1_182310	NW_004457592.1	179021	181129	R	encoded by transcript ACA1_182310A; Adenylosuccinate lyase 1, putative	complement(join(179021..179584,179664..179822,179905..180154,180305..180446,180521..180719,180810..180934,181012..181129))	Acanthamoeba castellanii str. Neff	14922219
ACA1_182320	CDS	ACA1_182320	NW_004457592.1	181328	184503	D	encoded by transcript ACA1_182320A; adenylosuccinate synthase	join(181328..181384,181666..181906,181989..182129,182232..182482,182582..182803,182883..183039,183126..183321,183383..183489,184053..184152,184259..184337,184453..184503)	Acanthamoeba castellanii str. Neff	14922220
ACA1_182330	CDS	ACA1_182330	NW_004457592.1	184641	185922	D	encoded by transcript ACA1_182330A; MED6 mediator sub complex component protein	join(184641..184796,184884..184971,185109..185236,185331..185484,185606..185703,185866..185922)	Acanthamoeba castellanii str. Neff	14922221
ACA1_182340	CDS	ACA1_182340	NW_004457592.1	185987	188993	R	encoded by transcript ACA1_182340A; uncharacterized protein	complement(join(185987..186245,186357..186721,186833..186943,187087..187366,187513..187634,187742..187906,188023..188672,188804..188993))	Acanthamoeba castellanii str. Neff	14922222
ACA1_182350	CDS	ACA1_182350	NW_004457592.1	189331	195138	R	encoded by transcript ACA1_182350A; carbamoylphosphate synthase, large subunit	complement(join(189331..191293,191476..191962,192044..192225,192335..192483,192593..192934,193073..193518,193642..193971,194086..194230,194368..194489,194657..194780,194986..>195138))	Acanthamoeba castellanii str. Neff	14922223
ACA1_182360	CDS	ACA1_182360	NW_004457592.1	195834	197766	D	encoded by transcript ACA1_182360A; argininosuccinate lyase, putative	join(195834..196722,196829..196936,197034..197268,197430..197766)	Acanthamoeba castellanii str. Neff	14922224
ACA1_182370	CDS	ACA1_182370	NW_004457592.1	198063	199096	R	encoded by transcript ACA1_182370A; osteoclaststimulating factor, putative	complement(join(198063..198115,198266..198380,198575..198693,198830..198973,199084..199096))	Acanthamoeba castellanii str. Neff	14922225
ACA1_182380	CDS	ACA1_182380	NW_004457592.1	199556	202651	D	encoded by transcript ACA1_182380A; transcription factor sii (tfiis), central domain containing protein	join(199556..200102,200206..200396,200546..200719,200880..201014,201097..201526,201728..201772,201884..201971,202113..202233,202347..202457,202532..202651)	Acanthamoeba castellanii str. Neff	14922226
ACA1_182390	CDS	ACA1_182390	NW_004457592.1	203225	203629	D	encoded by transcript ACA1_182390A; cytochrome b-like heme/steroid binding domain containing protein	203225..203629	Acanthamoeba castellanii str. Neff	14922227
ACA1_182400	CDS	ACA1_182400	NW_004457592.1	204081	205922	D	encoded by transcript ACA1_182400A; uncharacterized protein	join(204081..204184,204265..204326,204540..204671,204815..204872,204962..205013,205154..205223,205408..205613,205734..205922)	Acanthamoeba castellanii str. Neff	14922228
ACA1_182410	CDS	ACA1_182410	NW_004457592.1	206099	207427	R	encoded by transcript ACA1_182410A; homeobox prox 1, putative	complement(join(206099..206131,206215..206336,206452..206584,206689..206777,206900..206986,207090..207195,207347..207427))	Acanthamoeba castellanii str. Neff	14922229
ACA1_182530	CDS	ACA1_182530	NW_004457592.1	210738	215232	D	encoded by transcript ACA1_182530A; Pumiliofamily RNA binding repeat domain containing protein	join(210738..210813,210893..210961,211131..211384,211559..211874,212031..212410,212512..213252,213349..213642,213838..214263,214419..214706,214828..215000,215130..215232)	Acanthamoeba castellanii str. Neff	14922231
ACA1_182540	CDS	ACA1_182540	NW_004457592.1	215821	222134	D	encoded by transcript ACA1_182540A; CNH domain containing protein	join(215821..215847,215859..215922,216080..216271,216431..216536,216687..216837,217017..217158,217325..217537,217700..217767,217927..218016,218208..218270,218374..218494,218627..218705,218902..218941,219029..219094,219357..219533,219669..219739,219827..219983,220130..220228,220358..220436,220553..220590,220824..220940,221205..221507,221638..221697,221862..222134)	Acanthamoeba castellanii str. Neff	14922232
ACA1_182550	CDS	ACA1_182550	NW_004457592.1	222871	228508	D	encoded by transcript ACA1_182550A; glycosyltransferase, group 1 domain containing protein	join(222871..222948,223481..223802,224004..224114,224320..224405,224602..224762,224969..225093,225157..225303,225451..225547,225718..225831,225958..226018,226287..226390,226623..226750,226821..226846,226890..226970,227106..227363,227546..227629,227726..227828,227985..228127,228173..228508)	Acanthamoeba castellanii str. Neff	14922233
ACA1_182660	CDS	ACA1_182660	NW_004457592.1	228705	230364	D	encoded by transcript ACA1_182660A; uncharacterized protein	join(228705..228878,229002..229137,229251..229324,229577..229663,229844..229940,230016..230178,230343..230364)	Acanthamoeba castellanii str. Neff	14922234
ACA1_182770	CDS	ACA1_182770	NW_004457592.1	235909	237142	R	encoded by transcript ACA1_182770A; uncharacterized protein	complement(join(235909..236511,236594..236809,237068..237142))	Acanthamoeba castellanii str. Neff	14922235
ACA1_182790	CDS	ACA1_182790	NW_004457592.1	243088	248827	D	encoded by transcript ACA1_182790A; ATPdependent DNA helicase	join(243088..243177,243295..243496,243626..243660,243802..243886,244024..244192,244284..244356,244475..244544,244691..244785,244905..244977,245395..245459,245492..245633,245794..245846,246027..246144,246263..246323,246496..246624,246884..246995,247133..247238,247404..247476,247705..247825,247972..248011,248150..248228,248461..248614,248711..248827)	Acanthamoeba castellanii str. Neff	14922237
ACA1_182800	CDS	ACA1_182800	NW_004457592.1	248952	249939	R	encoded by transcript ACA1_182800A; PXMP2/4 family protein 3, putative	complement(join(248952..249099,249191..249513,249835..249939))	Acanthamoeba castellanii str. Neff	14922238
ACA1_182810	CDS	ACA1_182810	NW_004457592.1	250181	254195	D	encoded by transcript ACA1_182810A; atpdependent rna helicase ddx10, putative	join(250181..250357,250555..250720,250864..250988,251176..251314,251910..252034,252216..252407,252758..252881,253015..253138,253267..253363,253555..253641,253849..253944,254019..254117,254139..254195)	Acanthamoeba castellanii str. Neff	14922239
ACA1_182820	CDS	ACA1_182820	NW_004457592.1	254204	255404	D	encoded by transcript ACA1_182820A; uncharacterized protein	join(254204..254338,254608..254762,254893..254989,255102..255404)	Acanthamoeba castellanii str. Neff	14922240
ACA1_182830	CDS	ACA1_182830	NW_004457592.1	255454	258023	R	encoded by transcript ACA1_182830A; ATPase/histidine kinase/DNA gyrase B/HSP90 domain containing protein	complement(join(255454..256243,256257..256309,256456..257407,257643..257723,257860..258023))	Acanthamoeba castellanii str. Neff	14922241
ACA1_182840	CDS	ACA1_182840	NW_004457592.1	260409	263558	R	encoded by transcript ACA1_182840A; MATE efflux family subfamily protein	complement(join(260409..260625,260901..261001,261199..261323,261542..261631,261714..261907,262055..262209,262402..262519,262747..262855,263105..263240,263382..263558))	Acanthamoeba castellanii str. Neff	14922242
ACA1_182850	CDS	ACA1_182850	NW_004457592.1	264072	266343	R	encoded by transcript ACA1_182850A; RFX DNAbinding domain containing protein	complement(join(264072..264129,264370..264559,264592..265147,265220..265849,265969..266083,266291..266343))	Acanthamoeba castellanii str. Neff	14922243
ACA1_182860	CDS	ACA1_182860	NW_004457592.1	266990	269282	R	encoded by transcript ACA1_182860A; ankyrin repeat protein, putative	complement(join(266990..267307,267419..267641,267767..267911,267999..268271,268366..268512,268575..268926,269061..269282))	Acanthamoeba castellanii str. Neff	14922244
ACA1_182870	CDS	ACA1_182870	NW_004457592.1	269539	274093	D	encoded by transcript ACA1_182870A; G patch domain containing protein 1, putative	join(269539..269686,269842..270038,270164..270353,270479..270765,270915..270990,271129..271350,271454..271527,271632..271670,271743..271797,271923..272097,272234..272364,272527..272643,272777..272977,273124..273240,273363..274093)	Acanthamoeba castellanii str. Neff	14922245
ACA1_182880	CDS	ACA1_182880	NW_004457592.1	274266	283459	R	encoded by transcript ACA1_182880A; zinc finger in N-recognin protein	complement(join(274266..274409,274567..274698,274809..274865,274989..275084,275252..275409,275544..275816,275894..276011,276108..276392,276506..276613,276747..276932,277134..277492,277609..277795,277910..278335,278454..278626,278751..278850,278972..279118,279223..279393,279489..279630,279751..280082,280196..280340,280448..281000,281124..281403,281533..281690,281780..281882,282008..282269,282358..282607,282872..282921,283009..283141,283294..283459))	Acanthamoeba castellanii str. Neff	14922246
ACA1_182890	CDS	ACA1_182890	NW_004457592.1	285253	287989	D	encoded by transcript ACA1_182890A; uncharacterized protein	join(285253..285759,285867..285929,286052..286135,286265..286347,286462..286607,286710..287989)	Acanthamoeba castellanii str. Neff	14922247
ACA1_182900	CDS	ACA1_182900	NW_004457592.1	288557	289264	R	encoded by transcript ACA1_182900A; uncharacterized protein	complement(join(288557..288603,288756..288967,289131..289264))	Acanthamoeba castellanii str. Neff	14922248
ACA1_182910	CDS	ACA1_182910	NW_004457592.1	289407	290455	D	encoded by transcript ACA1_182910A; RNA recognition motif domain containing protein	join(289407..289508,289613..289765,289975..290081,290230..290455)	Acanthamoeba castellanii str. Neff	14922249
ACA1_182920	CDS	ACA1_182920	NW_004457592.1	290646	291828	R	encoded by transcript ACA1_182920A; methylthioribulose1-phosphate dehydratase	complement(join(290646..290717,290802..290850,290974..291207,291325..291507,291713..291828))	Acanthamoeba castellanii str. Neff	14922250
ACA1_182930	CDS	ACA1_182930	NW_004457592.1	292305	292690	D	encoded by transcript ACA1_182930A; uncharacterized protein	join(292305..292401,292587..292690)	Acanthamoeba castellanii str. Neff	14922251
ACA1_182940	CDS	ACA1_182940	NW_004457592.1	292969	296063	D	encoded by transcript ACA1_182940A; Myblike DNA-binding domain containing protein	join(292969..293256,293516..293616,293688..293814,293880..294494,294598..294885,294978..295234,295348..295680,295757..295910,295989..296063)	Acanthamoeba castellanii str. Neff	14922252
ACA1_182950	CDS	ACA1_182950	NW_004457592.1	296402	298483	D	encoded by transcript ACA1_182950A; farnesyl pyrophosphate synthetase	join(296402..296533,296663..296687,296806..296918,297072..297158,297251..297480,297610..297622,297880..298014,298168..298278,298394..298483)	Acanthamoeba castellanii str. Neff	14922253
ACA1_182960	CDS	ACA1_182960	NW_004457592.1	299331	301724	R	encoded by transcript ACA1_182960A; rhodaneselike domain containing protein	complement(join(299331..299518,299631..299821,299915..300038,300161..301724))	Acanthamoeba castellanii str. Neff	14922254
ACA1_182970	CDS	ACA1_182970	NW_004457592.1	302294	304668	R	encoded by transcript ACA1_182970A; uncharacterized protein	complement(join(302294..302629,302742..303282,303366..303592,303708..304094,304204..304668))	Acanthamoeba castellanii str. Neff	14922255
ACA1_182980	CDS	ACA1_182980	NW_004457592.1	304837	305930	R	encoded by transcript ACA1_182980A; SEC13, putative	complement(join(304837..304980,305142..305930))	Acanthamoeba castellanii str. Neff	14922256
ACA1_182990	CDS	ACA1_182990	NW_004457592.1	306163	308338	R	encoded by transcript ACA1_182990A; alkaline phosphatase D domain containing protein	complement(join(306163..306429,306522..306671,306801..306895,306987..307072,307188..307489,307551..307664,307790..307935,308125..308338))	Acanthamoeba castellanii str. Neff	14922257
ACA1_183000	CDS	ACA1_183000	NW_004457592.1	308680	309736	D	encoded by transcript ACA1_183000A; Hypothetical protein	join(308680..308697,308826..308903,309022..309195,309438..309515,309620..309736)	Acanthamoeba castellanii str. Neff	14922258
ACA1_183010	CDS	ACA1_183010	NW_004457592.1	309757	311858	D	encoded by transcript ACA1_183010A; aarF domain containing kinase 5, putative	join(309757..309867,309963..310040,310118..310184,310303..310388,310475..310635,310747..310857,310992..311129,311242..311394,311470..311582,311698..311858)	Acanthamoeba castellanii str. Neff	14922259
ACA1_183020	CDS	ACA1_183020	NW_004457592.1	314635	315714	R	encoded by transcript ACA1_183020A; uncharacterized protein	complement(314635..315714)	Acanthamoeba castellanii str. Neff	14922260
ACA1_183030	CDS	ACA1_183030	NW_004457592.1	316173	318352	R	encoded by transcript ACA1_183030A; DTW domain containing protein, putative	complement(join(316173..316340,316475..316591,316678..316806,316898..317912,318066..318352))	Acanthamoeba castellanii str. Neff	14922261
ACA1_183040	CDS	ACA1_183040	NW_004457592.1	318524	320874	D	encoded by transcript ACA1_183040A; Mphase phosphoprotein 10, putative	join(318524..318722,318925..319118,319212..320591,320677..320874)	Acanthamoeba castellanii str. Neff	14922262
ACA1_183050	CDS	ACA1_183050	NW_004457592.1	321732	326679	D	encoded by transcript ACA1_183050A; kelch repeat-containing protein	join(321732..321757,321953..322167,322285..322473,322565..322720,322839..322991,323117..323266,323381..323545,323647..323933,324001..324314,324423..324541,324635..325468,325579..325655,325732..325843,325937..326317,326411..326679)	Acanthamoeba castellanii str. Neff	14922263
ACA1_183060	CDS	ACA1_183060	NW_004457592.1	327183	328747	R	encoded by transcript ACA1_183060A; uncharacterized protein	complement(join(327183..327333,327471..327827,327913..328029,328130..328446,328482..328503,328584..328747))	Acanthamoeba castellanii str. Neff	14922264
ACA1_183070	CDS	ACA1_183070	NW_004457592.1	329257	330684	R	encoded by transcript ACA1_183070A; cysteine synthase 2, putative	complement(join(329257..329388,329557..329670,329741..329828,329956..330044,330223..330228,330282..330309,330366..330460,330541..330684))	Acanthamoeba castellanii str. Neff	14922265
ACA1_183080	CDS	ACA1_183080	NW_004457592.1	330705	331401	R	encoded by transcript ACA1_183080A; cysteine synthase, putative	complement(join(330705..330883,330955..331009,331141..331401))	Acanthamoeba castellanii str. Neff	14922266
ACA1_183090	CDS	ACA1_183090	NW_004457592.1	331546	332827	D	encoded by transcript ACA1_183090A; uncharacterized protein	join(331546..331600,331850..331975,332097..332827)	Acanthamoeba castellanii str. Neff	14922267
ACA1_183100	CDS	ACA1_183100	NW_004457592.1	332922	334449	R	encoded by transcript ACA1_183100A; uncharacterized protein	complement(join(332922..333025,333149..333227,333384..333476,333681..333891,333980..334229,334392..334449))	Acanthamoeba castellanii str. Neff	14922268
ACA1_183110	CDS	ACA1_183110	NW_004457592.1	335413	336810	D	encoded by transcript ACA1_183110A; homeobox domain containing protein	335413..336810	Acanthamoeba castellanii str. Neff	14922269
ACA1_183120	CDS	ACA1_183120	NW_004457592.1	337051	338250	D	encoded by transcript ACA1_183120A; prenylated rab acceptor 1, putative	join(337051..337214,337363..337465,337545..337650,337751..337884,338013..338111,338164..338250)	Acanthamoeba castellanii str. Neff	14922270
ACA1_183130	CDS	ACA1_183130	NW_004457592.1	338398	340452	R	encoded by transcript ACA1_183130A; uncharacterized protein	complement(join(338398..338433,338504..338654,338748..338850,338940..339027,339182..339310,339422..339518,339599..339666,339891..340024,340175..340253,340372..340452))	Acanthamoeba castellanii str. Neff	14922271
ACA1_183140	CDS	ACA1_183140	NW_004457592.1	340746	342174	R	encoded by transcript ACA1_183140A; deoxyadenosine kinase	complement(join(340746..340877,341024..341159,341252..341319,341403..341488,341577..341646,341752..341810,341886..341945,342165..342174))	Acanthamoeba castellanii str. Neff	14922272
ACA1_183150	CDS	ACA1_183150	NW_004457592.1	342653	343579	D	encoded by transcript ACA1_183150A; uncharacterized protein	342653..343579	Acanthamoeba castellanii str. Neff	14922273
ACA1_183160	CDS	ACA1_183160	NW_004457592.1	344315	348686	D	encoded by transcript ACA1_183160A; cytochrome p450 superfamily protein	join(344315..344330,344576..344605,344640..344668,344760..344858,344987..345099,345194..345296,345391..345453,345685..345756,345852..345938,345986..346022,346293..346502,346671..346760,346859..346985,347081..347235,347370..347550,347648..347735,347799..347972,348070..348245,348330..348428,348503..348686)	Acanthamoeba castellanii str. Neff	14922274
ACA1_183170	CDS	ACA1_183170	NW_004457592.1	349082	351213	D	encoded by transcript ACA1_183170A; transporter, major facilitator subfamily protein	join(349082..349381,349497..349652,349730..349969,350068..350245,350311..350453,350531..350605,350704..350947,351041..351213)	Acanthamoeba castellanii str. Neff	14922275
ACA1_183180	CDS	ACA1_183180	NW_004457592.1	351658	352134	D	encoded by transcript ACA1_183180A; redoxin domain containing protein	join(<351658..351684,351802..352134)	Acanthamoeba castellanii str. Neff	14922276
ACA1_183190	CDS	ACA1_183190	NW_004457592.1	352171	354433	R	encoded by transcript ACA1_183190A; uncharacterized protein	complement(join(352171..352258,352340..352477,352681..352781,352888..353003,353122..353226,353342..353483,353817..353988,354094..354178,354298..354433))	Acanthamoeba castellanii str. Neff	14922277
ACA1_183200	CDS	ACA1_183200	NW_004457592.1	355737	356848	D	encoded by transcript ACA1_183200A; uncharacterized protein	join(355737..356149,356217..356544,356648..356848)	Acanthamoeba castellanii str. Neff	14922278
ACA1_183210	CDS	ACA1_183210	NW_004457592.1	356987	357911	R	encoded by transcript ACA1_183210A; uncharacterized protein	complement(join(356987..357210,357301..357377,357523..357657,357772..357911))	Acanthamoeba castellanii str. Neff	14922279
ACA1_183220	CDS	ACA1_183220	NW_004457592.1	358392	359506	R	encoded by transcript ACA1_183220A; uncharacterized protein	complement(join(358392..358544,358664..358732,358826..358897,359024..359166,359287..359506))	Acanthamoeba castellanii str. Neff	14922280
ACA1_183230	CDS	ACA1_183230	NW_004457592.1	359881	360348	D	encoded by transcript ACA1_183230A; uncharacterized protein	359881..360348	Acanthamoeba castellanii str. Neff	14922281
ACA1_183240	CDS	ACA1_183240	NW_004457592.1	360928	362763	D	encoded by transcript ACA1_183240A; LysM domain containing protein	join(360928..360974,361040..361225,361337..361472,361560..361740,361815..362267,362477..362649,362725..362763)	Acanthamoeba castellanii str. Neff	14922282
ACA1_183250	CDS	ACA1_183250	NW_004457592.1	362987	364506	R	encoded by transcript ACA1_183250A; PhytanoylCoA dioxygenase (PhyH) superfamily protein	complement(join(362987..363239,363306..363502,363602..363766,363834..363896,364001..364083,364178..364306,364395..364506))	Acanthamoeba castellanii str. Neff	14922283
ACA1_183260	CDS	ACA1_183260	NW_004457592.1	364659	365748	D	encoded by transcript ACA1_183260A; uncharacterized protein	join(364659..364956,365087..365196,365561..365613,365649..365748)	Acanthamoeba castellanii str. Neff	14922284
ACA1_183270	CDS	ACA1_183270	NW_004457592.1	365949	370657	D	encoded by transcript ACA1_183270A; tyrosine protein kinase, putative	join(365949..366038,366489..366592,366706..367229,367365..367552,367634..367725,367788..367828,367924..368045,368171..368235,368341..368401,368477..368581,368704..368850,368969..369072,369130..370657)	Acanthamoeba castellanii str. Neff	14922285
ACA1_183280	CDS	ACA1_183280	NW_004457592.1	371102	372189	D	encoded by transcript ACA1_183280A; uncharacterized protein	join(371102..371180,371264..372189)	Acanthamoeba castellanii str. Neff	14922286
ACA1_183290	CDS	ACA1_183290	NW_004457592.1	372986	374041	D	encoded by transcript ACA1_183290A; uncharacterized protein	join(372986..373064,373098..374041)	Acanthamoeba castellanii str. Neff	14922287
ACA1_183300	CDS	ACA1_183300	NW_004457592.1	374543	375521	D	encoded by transcript ACA1_183300A; uncharacterized protein	join(374543..374782,374919..375144,375247..375521)	Acanthamoeba castellanii str. Neff	14922288
ACA1_183310	CDS	ACA1_183310	NW_004457592.1	375663	377883	D	encoded by transcript ACA1_183310A; uncharacterized protein	join(375663..375668,375763..375826,375941..376014,376126..376239,376354..376461,376599..376739,376846..377079,377204..377273,377406..377570,377666..377883)	Acanthamoeba castellanii str. Neff	14922289
ACA1_183320	CDS	ACA1_183320	NW_004457592.1	378073	379271	D	encoded by transcript ACA1_183320A; uncharacterized protein	join(378073..378415,378602..378693,378799..379045,379156..379271)	Acanthamoeba castellanii str. Neff	14922290
ACA1_183330	CDS	ACA1_183330	NW_004457592.1	379883	380557	R	encoded by transcript ACA1_183330A; Copia protein (Gagint-pol protein), putative	complement(join(379883..380179,380252..380306,380370..380557))	Acanthamoeba castellanii str. Neff	14922291
ACA1_183340	CDS	ACA1_183340	NW_004457592.1	380581	381309	R	encoded by transcript ACA1_183340A; GagPol, putative	complement(380581..381309)	Acanthamoeba castellanii str. Neff	14922292
ACA1_183350	CDS	ACA1_183350	NW_004457592.1	383317	384692	D	encoded by transcript ACA1_183350A; short chain dehydrogenase/reductase family	join(383317..383454,383574..383658,383763..383835,383946..384115,384267..384305,384406..384692)	Acanthamoeba castellanii str. Neff	14922293
ACA1_183360	CDS	ACA1_183360	NW_004457592.1	384860	385753	D	encoded by transcript ACA1_183360A; uncharacterized protein	384860..385753	Acanthamoeba castellanii str. Neff	14922294
ACA1_183370	CDS	ACA1_183370	NW_004457592.1	385917	389030	D	encoded by transcript ACA1_183370A; tetratricopeptide repeat domain containing protein	join(385917..386204,386271..386432,386511..386720,386824..387207,387273..387397,387486..387607,387711..387845,387923..388081,388151..388250,388306..388428,388825..388889,388957..389030)	Acanthamoeba castellanii str. Neff	14922295
ACA1_183380	CDS	ACA1_183380	NW_004457592.1	389155	389478	R	encoded by transcript ACA1_183380A; FGGAP repeat-containing protein	complement(389155..389478)	Acanthamoeba castellanii str. Neff	14922296
ACA1_183390	CDS	ACA1_183390	NW_004457592.1	390885	400340	R	encoded by transcript ACA1_183390A; uncharacterized protein	complement(join(390885..390894,391181..391304,391403..391442,391595..391769,391841..391903,391991..392429,392552..392709,392817..392915,393040..393220,393314..394073,394207..394404,394574..394741,394839..395030,395046..395185,395288..395718,395798..395918,395998..396111,396327..396446,396523..396898,397027..397159,397247..397367,397461..397606,397701..397813,397904..397993,398077..398520,398623..398714,398811..398915,399007..399330,399439..399589,399688..399995,400118..400164,400234..400340))	Acanthamoeba castellanii str. Neff	14922297
ACA1_183400	CDS	ACA1_183400	NW_004457592.1	400672	401788	D	encoded by transcript ACA1_183400A; ATPdependent protease HslVU, peptidase subunit	join(400672..400818,400923..401025,401112..401245,401409..401591,401654..401788)	Acanthamoeba castellanii str. Neff	14922298
ACA1_183410	CDS	ACA1_183410	NW_004457592.1	401900	402269	R	encoded by transcript ACA1_183410A; uncharacterized protein	complement(join(401900..401965,402043..402088,402163..402269))	Acanthamoeba castellanii str. Neff	14922299
ACA1_183420	CDS	ACA1_183420	NW_004457592.1	402382	404598	D	encoded by transcript ACA1_183420A; L-2-hydroxyglutarate dehydrogenase, mitochondrial precursor, putative	join(402382..402456,402563..402643,402732..402812,402895..402952,403092..403204,403305..403455,403547..403619,403721..403889,403997..404148,404232..404359,404474..404598)	Acanthamoeba castellanii str. Neff	14922300
ACA1_183430	CDS	ACA1_183430	NW_004457592.1	405049	407768	D	encoded by transcript ACA1_183430A; uncharacterized protein	join(405049..405333,405444..405472,405593..405679,406357..406445,406567..406637,406761..406953,407051..407179,407244..407358,407469..407541,407643..407768)	Acanthamoeba castellanii str. Neff	14922301
ACA1_183440	CDS	ACA1_183440	NW_004457592.1	408156	410469	D	encoded by transcript ACA1_183440A; transporter, major facilitator subfamily protein	join(408156..408219,408312..408412,408501..408819,408902..408970,409119..409259,409358..409573,409682..409818,409898..410011,410100..410288,410371..410469)	Acanthamoeba castellanii str. Neff	14922302
ACA1_183460	CDS	ACA1_183460	NW_004457592.1	416779	420209	R	encoded by transcript ACA1_183460A; BTB/POZ domain containing protein	complement(join(416779..416846,416926..417086,417267..417344,417555..417642,417830..418586,418678..418837,418964..419138,419345..419435,419541..419626,419831..420209))	Acanthamoeba castellanii str. Neff	14922304
ACA1_183470	CDS	ACA1_183470	NW_004457592.1	420545	423847	D	encoded by transcript ACA1_183470A; lysosomal betagalactosidase	join(<420545..420649,420797..420905,421068..421214,421295..421438,421525..421654,421746..421889,422048..422214,422319..422380,422504..422611,422810..423131,423261..423365,423452..423566,423691..423847)	Acanthamoeba castellanii str. Neff	14922305
ACA1_183480	CDS	ACA1_183480	NW_004457592.1	423944	426511	R	encoded by transcript ACA1_183480A; EF hand,SPla/RYanodine receptor (SPRY) domain containing protein	complement(join(423944..424009,424169..424281,424396..424521,424655..424761,424853..424981,425064..425208,425314..425545,425652..425752,425870..425959,426076..426168,426294..426365,426457..426511))	Acanthamoeba castellanii str. Neff	14922306
ACA1_183490	CDS	ACA1_183490	NW_004457592.1	427248	431323	D	encoded by transcript ACA1_183490A; protein kinase domain containing protein	join(427248..427283,427509..427593,427760..427904,428038..428131,428268..428351,428517..428580,428735..428822,429010..429131,429276..429345,429455..429569,429702..429846,429963..429988,430095..430370,430481..431323)	Acanthamoeba castellanii str. Neff	14922307
ACA1_183500	CDS	ACA1_183500	NW_004457592.1	432196	434039	D	encoded by transcript ACA1_183500A; hydrolase, alpha/beta fold domain containing protein	join(432196..432476,432647..432756,432887..433019,433179..433313,433401..433477,433630..433834,433931..434039)	Acanthamoeba castellanii str. Neff	14922308
ACA1_183510	CDS	ACA1_183510	NW_004457592.1	434227	436496	D	encoded by transcript ACA1_183510A; erythronate4-phosphate dehydrogenase domain containing protein	join(434227..434386,434539..434669,434786..435019,435107..435305,435423..435522,435637..435741,435867..436221,436308..436496)	Acanthamoeba castellanii str. Neff	14922309
ACA1_183520	CDS	ACA1_183520	NW_004457592.1	436596	437531	D	encoded by transcript ACA1_183520A; biotin holocarboxylase synthetase/biotinprotein ligase	436596..437531	Acanthamoeba castellanii str. Neff	14922310
ACA1_183530	CDS	ACA1_183530	NW_004457592.1	438177	448232	R	encoded by transcript ACA1_183530A; leucine rich repeat domain containing protein	complement(join(438177..438350,438419..438498,438601..438726,438834..439113,439232..440713,440843..440996,441101..442584,442690..442934,443049..443197,443357..443448,443512..443673,443839..443942,444044..444253,444318..444481,444549..444627,444741..444846,444941..445050,445137..445220,445546..445599,445842..446232,446334..446536,446604..448048,448225..448232))	Acanthamoeba castellanii str. Neff	14922311
ACA1_183540	CDS	ACA1_183540	NW_004457592.1	449170	450396	D	encoded by transcript ACA1_183540A; uncharacterized protein	449170..450396	Acanthamoeba castellanii str. Neff	14922312
ACA1_183560	CDS	ACA1_183560	NW_004457592.1	454401	454943	D	encoded by transcript ACA1_183560A; Peptidylprolyl isomerase FKBP12, putative	join(454401..454516,454589..454647,454711..454798,454877..454943)	Acanthamoeba castellanii str. Neff	14922314
ACA1_183570	CDS	ACA1_183570	NW_004457592.1	455075	456899	R	encoded by transcript ACA1_183570A; GDPD-mannose-3',5'-epimerase	complement(join(455075..455354,455437..455567,455692..455803,455908..456069,456180..456251,456337..456505,456626..456899))	Acanthamoeba castellanii str. Neff	14922315
ACA1_183580	CDS	ACA1_183580	NW_004457592.1	457128	458674	R	encoded by transcript ACA1_183580A; uncharacterized protein	complement(join(457128..457223,457372..457509,457626..457701,457777..457888,458021..458147,458279..458674))	Acanthamoeba castellanii str. Neff	14922316
ACA1_183590	CDS	ACA1_183590	NW_004457592.1	458989	460798	D	encoded by transcript ACA1_183590A; ankyrin 2	join(458989..459211,459278..459377,459508..459703,459790..459942,460007..460232,460335..460468,460571..460798)	Acanthamoeba castellanii str. Neff	14922317
ACA1_183600	CDS	ACA1_183600	NW_004457592.1	460882	462740	R	encoded by transcript ACA1_183600A; kinase, pfkB superfamily protein	complement(join(460882..461542,461609..461715,461787..461815,461981..462098,462200..462351,462467..462544,462692..462740))	Acanthamoeba castellanii str. Neff	14922318
ACA1_183610	CDS	ACA1_183610	NW_004457592.1	462916	463763	R	encoded by transcript ACA1_183610A; uncharacterized protein	complement(join(462916..463303,463335..463419,463439..463537,463721..463763))	Acanthamoeba castellanii str. Neff	14922319
ACA1_183620	CDS	ACA1_183620	NW_004457592.1	464215	466189	R	encoded by transcript ACA1_183620A; citrate synthase, mitochondrial, putative	complement(join(464215..464416,464520..464713,464808..465563,465673..465798,465809..465916,466085..466189))	Acanthamoeba castellanii str. Neff	14922320
ACA1_183630	CDS	ACA1_183630	NW_004457592.1	466514	467539	R	encoded by transcript ACA1_183630A; DUF1264 domain protein	complement(join(466514..466699,466777..466919,466993..467176,467266..467376,467456..467539))	Acanthamoeba castellanii str. Neff	14922321
ACA1_183640	CDS	ACA1_183640	NW_004457592.1	469925	471656	R	encoded by transcript ACA1_183640A; carboxylesterase superfamily protein	complement(join(469925..470032,470053..471063,471198..471656))	Acanthamoeba castellanii str. Neff	14922322
ACA1_183650	CDS	ACA1_183650	NW_004457592.1	471961	474069	D	encoded by transcript ACA1_183650A; ankyrin repeat-containing protein	join(471961..472260,472353..472701,472770..472855,472952..473086,473459..473554,473653..473770,473858..474069)	Acanthamoeba castellanii str. Neff	14922323
ACA1_183660	CDS	ACA1_183660	NW_004457592.1	474186	476991	D	encoded by transcript ACA1_183660A; Phospholipase Blike protein, putative	join(474186..474381,474467..474532,474600..474721,474829..474948,475239..475359,475493..475646,475727..475844,475921..475999,476058..476139,476203..476361,476465..476556,476621..476691,476818..476991)	Acanthamoeba castellanii str. Neff	14922324
ACA1_183670	CDS	ACA1_183670	NW_004457592.1	477618	480023	D	encoded by transcript ACA1_183670A; Synapsin, ATP binding domain containing protein	join(477618..477912,478010..478137,478235..478321,478408..478481,478562..478638,478699..478752,479001..479058,479144..479217,479326..479510,479664..479783,479901..480023)	Acanthamoeba castellanii str. Neff	14922325
ACA1_183680	CDS	ACA1_183680	NW_004457592.1	480258	481732	D	encoded by transcript ACA1_183680A; glycosyl hydrolase, family 18 domain containing protein	join(480258..480408,480487..480515,480643..480785,480880..481215,481360..481732)	Acanthamoeba castellanii str. Neff	14922326
ACA1_183690	CDS	ACA1_183690	NW_004457592.1	483019	485038	R	encoded by transcript ACA1_183690A; uncharacterized protein	complement(join(483019..483195,483328..483391,483477..483495,483570..483620,483730..483807,483925..484386,484493..484919,484988..485038))	Acanthamoeba castellanii str. Neff	14922327
ACA1_183700	CDS	ACA1_183700	NW_004457592.1	485181	486089	R	encoded by transcript ACA1_183700A; uncharacterized protein	complement(join(485181..485243,485289..486089))	Acanthamoeba castellanii str. Neff	14922328
ACA1_183710	CDS	ACA1_183710	NW_004457592.1	486184	490453	R	encoded by transcript ACA1_183710A; ATPdependent DNA ligase domain containing protein	complement(join(486184..486251,486348..486454,486534..486802,486902..486994,487087..487179,487333..487376,487449..487518,487599..487687,487759..487850,487953..488037,488113..488189,488262..488555,488657..488722,488801..488879,488953..489128,489206..489312,489414..489545,489602..489963,490035..490296,490391..490453))	Acanthamoeba castellanii str. Neff	14922329
ACA1_183720	CDS	ACA1_183720	NW_004457592.1	490632	491270	D	encoded by transcript ACA1_183720A; uncharacterized protein	join(490632..490889,490971..491270)	Acanthamoeba castellanii str. Neff	14922330
ACA1_183730	CDS	ACA1_183730	NW_004457592.1	491314	492894	R	encoded by transcript ACA1_183730A; slime mold cyclic amp receptor protein	complement(join(491314..491330,491471..491540,491551..491626,491712..491785,491872..491987,492068..492219,492410..492894))	Acanthamoeba castellanii str. Neff	14922331
ACA1_183740	CDS	ACA1_183740	NW_004457592.1	493196	495498	D	encoded by transcript ACA1_183740A; uncharacterized protein	join(493196..493341,493410..493531,493616..493681,493759..493889,493952..494022,494085..494187,494266..494359,494476..494828,495050..495210,495381..495498)	Acanthamoeba castellanii str. Neff	14922332
ACA1_183750	CDS	ACA1_183750	NW_004457592.1	495791	499248	D	encoded by transcript ACA1_183750A; aspartate-tRNA ligase	join(495791..496173,496297..496423,496656..496855,496941..497050,497173..497297,497482..497571,497692..497768,497846..498241,498369..498593,498675..498755,498873..498989,499089..499248)	Acanthamoeba castellanii str. Neff	14922333
ACA1_183760	CDS	ACA1_183760	NW_004457592.1	499287	501551	R	encoded by transcript ACA1_183760A; uncharacterized protein	complement(join(499287..499954,500039..500130,500263..500364,500520..500598,500690..500786,500920..501033,501143..501278,501475..501551))	Acanthamoeba castellanii str. Neff	14922334
ACA1_183770	CDS	ACA1_183770	NW_004457592.1	502512	505669	R	encoded by transcript ACA1_183770A; acylCoA dehydrogenase, C-terminal domain containing protein	complement(join(502512..502622,502706..502947,503036..503173,503257..503341,503463..503648,503742..503883,503961..504286,504409..504566,504717..504868,505004..505111,505213..505267,505492..505669))	Acanthamoeba castellanii str. Neff	14922335
ACA1_183780	CDS	ACA1_183780	NW_004457592.1	506084	507565	R	encoded by transcript ACA1_183780A; uncharacterized protein	complement(join(506084..507145,507323..507565))	Acanthamoeba castellanii str. Neff	14922336
ACA1_183790	CDS	ACA1_183790	NW_004457592.1	509348	509832	D	encoded by transcript ACA1_183790A; uncharacterized protein	join(509348..509357,509439..509733,509808..509832)	Acanthamoeba castellanii str. Neff	14922337
ACA1_183900	CDS	ACA1_183900	NW_004457592.1	512090	515888	D	encoded by transcript ACA1_183900A; phosphatidylinositol phosphate kinase PIPK5, putative	join(512090..512558,512667..512796,512882..512991,513105..513187,513280..513358,513461..513537,513630..513752,513861..513940,514014..514152,514243..514328,514425..514506,514607..514738,514854..514918,515020..515083,515224..515363,515543..515732,515814..515888)	Acanthamoeba castellanii str. Neff	14922338
ACA1_183910	CDS	ACA1_183910	NW_004457592.1	518050	519959	D	encoded by transcript ACA1_183910A; glycerate kinase subfamily protein	join(518050..518173,518247..518332,518460..518648,518756..518836,518912..519064,519162..519350,519435..519627,519707..519789,519885..519959)	Acanthamoeba castellanii str. Neff	14922339
ACA1_183920	CDS	ACA1_183920	NW_004457592.1	520526	521383	D	encoded by transcript ACA1_183920A; Hsp20/alpha crystallin family protein	520526..521383	Acanthamoeba castellanii str. Neff	14922340
ACA1_183930	CDS	ACA1_183930	NW_004457592.1	521610	521974	R	encoded by transcript ACA1_183930A; signal recognition particle 9 kDa protein	complement(join(521610..521708,521767..521837,521905..521974))	Acanthamoeba castellanii str. Neff	14922341
ACA1_183940	CDS	ACA1_183940	NW_004457592.1	522177	524694	R	encoded by transcript ACA1_183940A; GTPase activating Rap/RanGAP domainlike 3, putative	complement(join(522177..522289,522376..522528,522624..522701,522769..522894,522963..523058,523136..523246,523339..523378,523669..523798,523866..523947,524082..524160,524254..524414,524514..524694))	Acanthamoeba castellanii str. Neff	14922342
ACA1_183950	CDS	ACA1_183950	NW_004457592.1	525594	527554	R	encoded by transcript ACA1_183950A; uncharacterized protein	complement(join(525594..526001,526074..526181,526256..526351,526438..526571,526651..527554))	Acanthamoeba castellanii str. Neff	14922343
ACA1_183960	CDS	ACA1_183960	NW_004457592.1	527656	530544	R	encoded by transcript ACA1_183960A; phosphoesterase family protein	complement(join(527656..527800,527902..528043,528145..528227,528300..528415,528481..528585,528683..528778,528887..528936,529023..529171,529269..529352,529425..529517,529590..529674,529741..529930,530059..530153,530354..530373,530471..530544))	Acanthamoeba castellanii str. Neff	14922344
ACA1_183970	CDS	ACA1_183970	NW_004457592.1	530772	534285	R	encoded by transcript ACA1_183970A; uncharacterized protein	complement(join(530772..530980,531079..531672,531734..531829,531918..531964,532124..532217,532317..532391,532484..532561,532629..532700,532843..532902,532980..533051,533283..533357,533441..533533,533602..533676,533763..533863,533923..534067,534159..534285))	Acanthamoeba castellanii str. Neff	14922345
ACA1_183980	CDS	ACA1_183980	NW_004457592.1	534725	535842	R	encoded by transcript ACA1_183980A; ProteinS-isoprenylcysteine O-methyltransferase	complement(join(534725..534859,534954..535038,535157..535259,535357..535503,535614..535842))	Acanthamoeba castellanii str. Neff	14922346
ACA1_183990	CDS	ACA1_183990	NW_004457592.1	536096	539836	D	encoded by transcript ACA1_183990A; RWD domain containing protein	join(<536096..536135,536200..536268,536352..536447,536527..536663,536762..536828,536987..537255,537330..537708,537814..538117,538193..538301,538707..538893,538963..539063,539181..539322,539413..539522,539609..539836)	Acanthamoeba castellanii str. Neff	14922347
ACA1_184000	CDS	ACA1_184000	NW_004457592.1	542974	543720	R	encoded by transcript ACA1_184000A; uncharacterized protein	complement(join(542974..542997,543124..543261,543403..543479,543627..543720))	Acanthamoeba castellanii str. Neff	14922348
ACA1_184010	CDS	ACA1_184010	NW_004457592.1	543999	544520	D	encoded by transcript ACA1_184010A; uncharacterized protein	543999..544520	Acanthamoeba castellanii str. Neff	14922349
ACA1_184020	CDS	ACA1_184020	NW_004457592.1	544887	546600	D	encoded by transcript ACA1_184020A; RHOD YceA domain containing protein	join(544887..545550,545702..546318,546343..546600)	Acanthamoeba castellanii str. Neff	14922350
ACA1_184030	CDS	ACA1_184030	NW_004457592.1	547142	547621	D	encoded by transcript ACA1_184030A; HMG (high mobility group) box domain containing protein	join(547142..547345,547418..547621)	Acanthamoeba castellanii str. Neff	14922351
ACA1_184040	CDS	ACA1_184040	NW_004457592.1	547793	548421	R	encoded by transcript ACA1_184040A; ribosomal protein s27a, putative	complement(join(547793..547943,548020..548236,548319..548421))	Acanthamoeba castellanii str. Neff	14922352
ACA1_184050	CDS	ACA1_184050	NW_004457592.1	548590	550556	R	encoded by transcript ACA1_184050A; uncharacterized protein	complement(join(548590..548817,548915..549009,549081..549414,549516..549617,549703..549778,549884..549950,550024..550138,550240..550389,550491..550556))	Acanthamoeba castellanii str. Neff	14922353
ACA1_184060	CDS	ACA1_184060	NW_004457592.1	551017	552544	R	encoded by transcript ACA1_184060A; Cdc20, putative	complement(join(551017..551786,551905..552544))	Acanthamoeba castellanii str. Neff	14922354
ACA1_184070	CDS	ACA1_184070	NW_004457592.1	553121	554006	D	encoded by transcript ACA1_184070A; uncharacterized protein	join(553121..553315,553396..553572,553662..554006)	Acanthamoeba castellanii str. Neff	14922355
ACA1_184080	CDS	ACA1_184080	NW_004457592.1	554361	555706	D	encoded by transcript ACA1_184080A; PHDfinger domain containing protein	join(554361..554391,554520..554591,554661..554848,554908..554974,555085..555154,555228..555372,555479..555533,555645..555706)	Acanthamoeba castellanii str. Neff	14922356
ACA1_184090	CDS	ACA1_184090	NW_004457592.1	555804	558456	R	encoded by transcript ACA1_184090A; uncharacterized protein	complement(join(555804..555950,556083..556253,556444..556617,556724..556797,556897..556974,557080..557578,557682..557756,557917..558001,558129..558199,558292..558456))	Acanthamoeba castellanii str. Neff	14922357
ACA1_184100	CDS	ACA1_184100	NW_004457592.1	558952	560111	R	encoded by transcript ACA1_184100A; Hypothetical protein	complement(join(558952..559122,559230..560111))	Acanthamoeba castellanii str. Neff	14922358
ACA1_184110	CDS	ACA1_184110	NW_004457592.1	560978	563757	D	encoded by transcript ACA1_184110A; uncharacterized protein	join(560978..561007,561078..561164,561425..561552,561645..562409,562544..562778,562870..563757)	Acanthamoeba castellanii str. Neff	14922359
ACA1_184120	CDS	ACA1_184120	NW_004457592.1	564338	565672	R	encoded by transcript ACA1_184120A; uncharacterized protein	complement(join(564338..565351,565440..565534,565606..565672))	Acanthamoeba castellanii str. Neff	14922360
ACA1_184130	CDS	ACA1_184130	NW_004457592.1	566071	567405	R	encoded by transcript ACA1_184130A; arsenic (+3 oxidation state) methyltransferase	complement(join(566071..566871,566993..567119,567245..567405))	Acanthamoeba castellanii str. Neff	14922361
ACA1_184140	CDS	ACA1_184140	NW_004457592.1	567513	567962	R	encoded by transcript ACA1_184140A; uncharacterized protein	complement(join(567513..567740,567867..567962))	Acanthamoeba castellanii str. Neff	14922362
ACA1_184150	CDS	ACA1_184150	NW_004457592.1	568553	572286	R	encoded by transcript ACA1_184150A; Myblike DNA-binding domain containing protein	complement(join(568553..569069,569226..569344,569422..570247,570327..570492,570596..572018,572221..572286))	Acanthamoeba castellanii str. Neff	14922363
ACA1_184160	CDS	ACA1_184160	NW_004457592.1	573046	574744	D	encoded by transcript ACA1_184160A; 26S protease regulatory subunit 6B family protein	join(573046..573081,573214..573787,573912..574029,574141..574494,574585..574744)	Acanthamoeba castellanii str. Neff	14922364
ACA1_184170	CDS	ACA1_184170	NW_004457592.1	575002	575211	D	encoded by transcript ACA1_184170A; pathogenesisrelated protein PR-6 type, putative	join(575002..575136,575149..575211)	Acanthamoeba castellanii str. Neff	14922365
ACA1_184180	CDS	ACA1_184180	NW_004457592.1	576206	577245	D	encoded by transcript ACA1_184180A; protein kinase domain containing protein	join(576206..576598,576676..577245)	Acanthamoeba castellanii str. Neff	14922366
ACA1_184190	CDS	ACA1_184190	NW_004457592.1	578205	581010	D	encoded by transcript ACA1_184190A; protein kinase domain containing protein	join(578205..578652,578736..578873,578981..579354,579450..579520,579543..579590,579619..580171,580183..581010)	Acanthamoeba castellanii str. Neff	14922367
ACA1_184200	CDS	ACA1_184200	NW_004457592.1	581810	582482	R	encoded by transcript ACA1_184200A; uncharacterized protein	complement(join(581810..581944,582051..582141,582215..582319,582382..582482))	Acanthamoeba castellanii str. Neff	14922368
ACA1_184210	CDS	ACA1_184210	NW_004457592.1	582701	584099	R	encoded by transcript ACA1_184210A; uncharacterized protein	complement(join(582701..583029,583126..583284,583426..583525,583679..583797,583886..584099))	Acanthamoeba castellanii str. Neff	14922369
ACA1_184220	CDS	ACA1_184220	NW_004457592.1	584974	587724	R	encoded by transcript ACA1_184220A; RhoGEF domain containing protein	complement(join(584974..584981,585065..585187,585291..585797,585897..586207,586309..586388,586489..586542,586680..587272,587430..587724))	Acanthamoeba castellanii str. Neff	14922370
ACA1_184230	CDS	ACA1_184230	NW_004457592.1	588552	589529	R	encoded by transcript ACA1_184230A; SNF1 related protein kinase, putative	complement(588552..589529)	Acanthamoeba castellanii str. Neff	14922371
ACA1_184240	CDS	ACA1_184240	NW_004457592.1	591099	591410	R	encoded by transcript ACA1_184240A; uncharacterized protein	complement(591099..591410)	Acanthamoeba castellanii str. Neff	14922372
ACA1_184250	CDS	ACA1_184250	NW_004457592.1	591965	593370	D	encoded by transcript ACA1_184250A; SPFH domain / Band 7 domain containing protein	join(591965..592405,592473..592622,592693..592918,593031..593204,593285..593370)	Acanthamoeba castellanii str. Neff	14922373
ACA1_184260	CDS	ACA1_184260	NW_004457592.1	593468	596357	R	encoded by transcript ACA1_184260A; Phytanoyl-CoA dioxygenase	complement(join(593468..593629,593721..593823,593920..594016,594090..594176,594327..594430,594505..594592,594668..594750,594826..594878,595175..595303,595449..595514,595588..595655,595727..595801,595934..596038,596099..596192,596271..596357))	Acanthamoeba castellanii str. Neff	14922374
ACA1_184270	CDS	ACA1_184270	NW_004457592.1	596787	600655	D	encoded by transcript ACA1_184270A; Ankyrin repeatcontaining protein	join(596787..596905,597044..597137,597249..597342,597431..597520,597592..597705,597810..597899,597965..598030,598117..598197,598276..598367,598485..599019,599108..599215,599321..599455,599545..599655,599742..599922,599987..600039,600120..600137,600154..600306,600378..600655)	Acanthamoeba castellanii str. Neff	14922375
ACA1_184280	CDS	ACA1_184280	NW_004457592.1	600760	606228	D	encoded by transcript ACA1_184280A; uncharacterized protein	join(600760..600795,601017..601209,601298..601372,601432..601533,601619..601757,601847..601936,602093..602302,602392..602431,602511..602568,602652..602974,603057..603160,603251..603385,603450..603652,603738..603823,603910..604074,604158..604255,604324..604496,604594..604737,604812..604873,604959..605083,605166..605265,605336..605410,605472..605565,605651..605736,605806..605882,606015..606228)	Acanthamoeba castellanii str. Neff	14922376
ACA1_184290	CDS	ACA1_184290	NW_004457592.1	606392	611799	D	encoded by transcript ACA1_184290A; Importin beta domain containing protein	join(606392..606497,606568..606629,606695..606787,606853..606918,606995..607097,607151..607299,607386..607461,607560..607690,607801..607901,607979..608102,608186..608269,608374..608493,608574..608784,608861..609036,609127..609264,609353..609436,609510..609569,609655..609759,609817..609890,609961..610077,610173..610296,610336..610485,610560..610664,610745..610795,610874..610957,611032..611122,611202..611356,611432..611560,611662..611799)	Acanthamoeba castellanii str. Neff	14922377
ACA1_184300	CDS	ACA1_184300	NW_004457592.1	612201	615305	D	encoded by transcript ACA1_184300A; ABC transporter, ATPbinding domain containing protein	join(612201..612892,612989..614049,614134..614498,614610..615305)	Acanthamoeba castellanii str. Neff	14922378
ACA1_184310	CDS	ACA1_184310	NW_004457592.1	615698	617322	D	encoded by transcript ACA1_184310A; DEAD/DEAH box helicase domain containing protein	join(615698..615775,615919..616024,616135..616303,616429..616770,616871..617104,617244..617322)	Acanthamoeba castellanii str. Neff	14922379
ACA1_184320	CDS	ACA1_184320	NW_004457592.1	617597	618088	R	encoded by transcript ACA1_184320A; homeobox domain containing protein	complement(617597..618088)	Acanthamoeba castellanii str. Neff	14922380
ACA1_184330	CDS	ACA1_184330	NW_004457592.1	618902	620588	R	encoded by transcript ACA1_184330A; uncharacterized protein	complement(join(618902..619473,619553..619706,619792..619910,620009..620246,620261..620473,620499..620588))	Acanthamoeba castellanii str. Neff	14922381
ACA1_184340	CDS	ACA1_184340	NW_004457592.1	620874	622499	R	encoded by transcript ACA1_184340A; tubulin alpha1a chain, putative	complement(join(620874..621179,621254..621366,621438..621597,621670..621747,621816..622256,622332..622499))	Acanthamoeba castellanii str. Neff	14922382
ACA1_184360	CDS	ACA1_184360	NW_004457592.1	626320	629170	R	encoded by transcript ACA1_184360A; ABC transporter, ATPbinding domain containing protein	complement(join(626320..626636,626708..626873,626975..627117,627429..627758,627835..628077,628157..628250,628316..628939,629054..629170))	Acanthamoeba castellanii str. Neff	14922384
ACA1_184370	CDS	ACA1_184370	NW_004457592.1	629364	630578	D	encoded by transcript ACA1_184370A; fungal Zn(2)-Cys(6) binuclear cluster domain containing protein	join(629364..629812,630027..630130,630177..630271,630359..630525,630539..630578)	Acanthamoeba castellanii str. Neff	14922385
ACA1_184380	CDS	ACA1_184380	NW_004457592.1	630995	631969	R	encoded by transcript ACA1_184380A; galactose binding lectin domain containing protein	complement(join(630995..631246,631359..631700,631826..631969))	Acanthamoeba castellanii str. Neff	14922386
ACA1_184390	CDS	ACA1_184390	NW_004457592.1	632584	633531	D	encoded by transcript ACA1_184390A; uncharacterized protein	join(632584..633021,633124..633531)	Acanthamoeba castellanii str. Neff	14922387
ACA1_184400	CDS	ACA1_184400	NW_004457592.1	633588	636320	R	encoded by transcript ACA1_184400A; ABC2 type transporter superfamily protein	complement(join(633588..633898,633980..634145,634240..634382,634452..634538,634611..634994,635079..635324,635409..635502,635592..636194,636285..636320))	Acanthamoeba castellanii str. Neff	14922388
ACA1_184410	CDS	ACA1_184410	NW_004457592.1	636582	637880	R	encoded by transcript ACA1_184410A; uncharacterized protein	complement(join(636582..637419,637447..637880))	Acanthamoeba castellanii str. Neff	14922389
ACA1_184420	CDS	ACA1_184420	NW_004457592.1	638120	641268	D	encoded by transcript ACA1_184420A; cathepsin Llike proteinase	join(638120..638203,638327..638437,638590..638731,638812..638985,639080..639194,639300..639360,639455..639596,639681..639793,639853..639983,640093..640192,640286..640355,640462..640559,640663..640834,640902..640959,641038..641113,641242..641268)	Acanthamoeba castellanii str. Neff	14922390
ACA1_184430	CDS	ACA1_184430	NW_004457592.1	641783	644522	D	encoded by transcript ACA1_184430A; Solute carrier family 29 (nucleoside transporters), member 1, putative	join(641783..641890,642022..642142,642278..642363,642472..642589,642677..642737,642853..642941,643046..643167,643257..643449,643524..643591,643920..644014,644092..644204,644281..644348,644427..644522)	Acanthamoeba castellanii str. Neff	14922391
ACA1_184440	CDS	ACA1_184440	NW_004457592.1	644695	647037	R	encoded by transcript ACA1_184440A; soluble guanylyl cyclase beta1 subunit, putative	complement(join(644695..646456,646564..646684,646896..647037))	Acanthamoeba castellanii str. Neff	14922392
ACA1_184450	CDS	ACA1_184450	NW_004457592.1	647544	649735	D	encoded by transcript ACA1_184450A; 3beta hydroxysteroid dehydrogenase/isomerase family protein	join(647544..647690,647842..648003,648128..648271,648360..648412,648520..648634,648734..648814,648884..648949,649044..649130,649202..649258,649337..649455,649534..649735)	Acanthamoeba castellanii str. Neff	14922393
ACA1_184460	CDS	ACA1_184460	NW_004457592.1	649856	651602	D	encoded by transcript ACA1_184460A; tumor protein p53 inducible protein 3, putative	join(649856..650022,650095..650211,650344..650407,650526..650648,650847..651042,651134..651212,651304..651367,651435..651490,651551..651602)	Acanthamoeba castellanii str. Neff	14922394
ACA1_184470	CDS	ACA1_184470	NW_004457592.1	652257	653428	D	encoded by transcript ACA1_184470A; uncharacterized protein	join(652257..652586,652694..652850,653111..653385,653414..653428)	Acanthamoeba castellanii str. Neff	14922395
ACA1_184480	CDS	ACA1_184480	NW_004457592.1	654000	654304	D	encoded by transcript ACA1_184480A; uncharacterized protein	join(654000..654212,654275..654304)	Acanthamoeba castellanii str. Neff	14922396
ACA1_184490	CDS	ACA1_184490	NW_004457592.1	654952	658058	D	encoded by transcript ACA1_184490A; agarase, putative	join(654952..655018,655138..655293,655376..655692,655799..655944,656029..656183,656260..656483,656598..656802,656906..657010,657108..657218,657288..657568,657672..658058)	Acanthamoeba castellanii str. Neff	14922397
ACA1_110850	CDS	ACA1_110850	NW_004457591.1	1	1313	R	encoded by transcript ACA1_110850A; uncharacterized protein	complement(join(<1..115,176..241,307..444,509..764,837..1313))	Acanthamoeba castellanii str. Neff	14922146
ACA1_110860	CDS	ACA1_110860	NW_004457591.1	1777	4093	D	encoded by transcript ACA1_110860A; SID1 transmembrane family, member 1, putative	join(1777..2157,2312..2465,2541..2625,2720..2831,2903..3063,3131..3263,3338..3450,3528..3648,3730..3841,3909..4006,4052..4093)	Acanthamoeba castellanii str. Neff	14922131
ACA1_110870	CDS	ACA1_110870	NW_004457591.1	4503	4913	D	encoded by transcript ACA1_110870A; uncharacterized protein	4503..4913	Acanthamoeba castellanii str. Neff	14922132
ACA1_110880	CDS	ACA1_110880	NW_004457591.1	5374	8551	D	encoded by transcript ACA1_110880A; sodiumdependent dicarboxylate transporter	join(5374..5611,5667..5815,5887..6016,6046..6110,6187..6257,6380..6612,6704..6760,6876..6961,7133..7222,7410..7484,7684..7733,7844..7946,8041..8146,8232..8362,8453..8551)	Acanthamoeba castellanii str. Neff	14922133
ACA1_110890	CDS	ACA1_110890	NW_004457591.1	8980	11037	D	encoded by transcript ACA1_110890A; hydrolase, alpha/beta fold domain containing protein	join(8980..9085,9204..9498,9687..9814,9898..9931,10047..10255,10348..10505,10594..10693,10763..11037)	Acanthamoeba castellanii str. Neff	14922134
ACA1_110900	CDS	ACA1_110900	NW_004457591.1	11140	11821	R	encoded by transcript ACA1_110900A; uncharacterized protein	complement(join(11140..11297,11360..11417,11521..11536,11547..11607,11664..11727,11777..11821))	Acanthamoeba castellanii str. Neff	14922135
ACA1_110910	CDS	ACA1_110910	NW_004457591.1	12111	14913	R	encoded by transcript ACA1_110910A; HEAT repeat-containing protein	complement(join(12111..12473,12618..12739,12839..12957,13056..13306,13390..13523,13640..13806,13878..14004,14100..14209,14287..14392,14501..14612,14714..14800,14875..14913))	Acanthamoeba castellanii str. Neff	14922136
ACA1_110920	CDS	ACA1_110920	NW_004457591.1	15089	16316	R	encoded by transcript ACA1_110920A; HEAT repeat domain containing protein	complement(join(15089..15097,15222..15332,15397..15441,15567..15716,15789..15866,15947..15987,16103..16316))	Acanthamoeba castellanii str. Neff	14922137
ACA1_110930	CDS	ACA1_110930	NW_004457591.1	16580	18188	R	encoded by transcript ACA1_110930A; hydrolase, NUDIX domain containing protein	complement(join(16580..16863,16948..17058,17133..17181,17477..17861,17941..18188))	Acanthamoeba castellanii str. Neff	14922138
ACA1_110940	CDS	ACA1_110940	NW_004457591.1	18368	19764	D	encoded by transcript ACA1_110940A; uncharacterized protein	join(18368..19068,19323..19764)	Acanthamoeba castellanii str. Neff	14922139
ACA1_111050	CDS	ACA1_111050	NW_004457591.1	20249	20548	D	encoded by transcript ACA1_111050A; uncharacterized protein	20249..20548	Acanthamoeba castellanii str. Neff	14922140
ACA1_111060	CDS	ACA1_111060	NW_004457591.1	20754	22047	R	encoded by transcript ACA1_111060A; xtp3transactivated protein, putative	complement(join(20754..20960,21047..21110,21188..21291,21393..21464,21601..21869,22014..22047))	Acanthamoeba castellanii str. Neff	14922141
ACA1_111070	CDS	ACA1_111070	NW_004457591.1	22255	25467	R	encoded by transcript ACA1_111070A; uncharacterized protein	complement(join(22255..23039,23119..23242,23327..23887,23989..24142,24297..24612,24690..25467))	Acanthamoeba castellanii str. Neff	14922142
ACA1_111080	CDS	ACA1_111080	NW_004457591.1	26729	31935	R	encoded by transcript ACA1_111080A; coppertranslocating P-type ATPase	complement(join(26729..26867,26960..27032,27105..27260,27357..27618,27662..27810,27892..28093,28205..28386,28487..28606,28749..28892,28987..29164,29259..29402,29503..29700,29794..30000,30071..30219,30361..30514,30613..30804,30941..31102,31273..31403,31534..31673,31883..31935))	Acanthamoeba castellanii str. Neff	14922143
ACA1_111090	CDS	ACA1_111090	NW_004457591.1	32432	32989	D	encoded by transcript ACA1_111090A; Coiledcoil domain containing protein	join(32432..32481,32623..32758,32873..32989)	Acanthamoeba castellanii str. Neff	14922144
ACA1_111100	CDS	ACA1_111100	NW_004457591.1	33103	33590	D	encoded by transcript ACA1_111100A; uncharacterized protein	join(33103..33325,33427..>33590)	Acanthamoeba castellanii str. Neff	14922145
ACA1_024360	CDS	ACA1_024360	NW_004457589.1	267	1505	D	encoded by transcript ACA1_024360A; uncharacterized protein	join(<267..291,562..834,954..1171,1283..>1505)	Acanthamoeba castellanii str. Neff	14922130
ACA1_024370	CDS	ACA1_024370	NW_004457589.1	1677	2591	R	encoded by transcript ACA1_024370A; uncharacterized protein	complement(join(1677..2360,2508..2591))	Acanthamoeba castellanii str. Neff	14922129
ACA1_024380	CDS	ACA1_024380	NW_004457589.1	3027	9583	R	encoded by transcript ACA1_024380A; myosin1, putative	complement(join(3027..3147,3233..3627,3717..3785,3952..4198,4282..4557,4638..4744,4832..5064,5148..5303,5402..5981,6055..6395,6469..6725,6830..7031,7104..7587,7649..7747,7772..7925,7993..8323,8395..8536,8624..8794,8954..9076,9233..9337,9461..9583))	Acanthamoeba castellanii str. Neff	14922123
ACA1_024390	CDS	ACA1_024390	NW_004457589.1	10369	12724	D	encoded by transcript ACA1_024390A; uncharacterized protein	join(10369..10495,10568..10665,10880..10942,10986..11090,11172..11270,11361..11445,11507..11977,12048..12137,12233..12563,12634..12724)	Acanthamoeba castellanii str. Neff	14922124
ACA1_024400	CDS	ACA1_024400	NW_004457589.1	13026	13592	R	encoded by transcript ACA1_024400A; uncharacterized protein	complement(13026..13592)	Acanthamoeba castellanii str. Neff	14922125
ACA1_024410	CDS	ACA1_024410	NW_004457589.1	14934	23009	D	encoded by transcript ACA1_024410A; serine/threonineprotein kinase	join(14934..15323,15535..15639,15720..16299,16379..16690,16764..16931,17012..17409,17505..17621,17720..17846,17970..18384,18502..18629,18706..18812,18896..18973,19067..19181,19297..19491,19561..19712,19813..19962,20041..20186,20267..20698,20900..21205,21421..21610,21688..21911,21989..22128,22215..22540,22570..22822,22900..23009)	Acanthamoeba castellanii str. Neff	14922126
ACA1_024420	CDS	ACA1_024420	NW_004457589.1	23141	24824	D	encoded by transcript ACA1_024420A; TatD DNase domain containing 1, putative	join(<23141..23168,23243..23263,23335..23393,23470..23569,23651..23809,23875..24034,24122..24218,24278..24353,24449..24519,24693..24824)	Acanthamoeba castellanii str. Neff	14922127
ACA1_024430	CDS	ACA1_024430	NW_004457589.1	25004	25966	D	encoded by transcript ACA1_024430A; uncharacterized protein	join(25004..25223,25298..25431,25530..25629,25703..25766,25843..25966)	Acanthamoeba castellanii str. Neff	14922128
ACA1_355230	CDS	ACA1_355230	NW_004457588.1	120	1045	D	encoded by transcript ACA1_355230A; uncharacterized protein	join(<120..456,573..715,811..894,971..1045)	Acanthamoeba castellanii str. Neff	14922122
ACA1_355240	CDS	ACA1_355240	NW_004457588.1	2758	5428	R	encoded by transcript ACA1_355240A; uncharacterized protein	complement(join(2758..2811,2887..3024,3117..3269,4597..4709,4812..5003,5095..5149,5208..5298,5379..5428))	Acanthamoeba castellanii str. Neff	14922113
ACA1_355350	CDS	ACA1_355350	NW_004457588.1	5635	6884	D	encoded by transcript ACA1_355350A; nicotinamide n-methyltransferase	join(5635..5666,5734..5816,5921..5965,6055..6129,6264..6504,6581..6694,6767..6884)	Acanthamoeba castellanii str. Neff	14922114
ACA1_355360	CDS	ACA1_355360	NW_004457588.1	6975	9543	R	encoded by transcript ACA1_355360A; transporter, major facilitator subfamily protein	complement(join(6975..7141,7269..7379,7508..7647,7768..7910,7983..8039,8175..8300,8409..8570,8656..8717,8805..8886,8986..9088,9165..9225,9399..9543))	Acanthamoeba castellanii str. Neff	14922115
ACA1_355470	CDS	ACA1_355470	NW_004457588.1	10604	12261	R	encoded by transcript ACA1_355470A; Cys/Met metabolism PLP-dependent enzyme superfamily protein	complement(join(<10604..10770,10913..10997,11554..11748,11829..11974,12087..12170,12255..12261))	Acanthamoeba castellanii str. Neff	14922119
ACA1_355590	CDS	ACA1_355590	NW_004457588.1	14792	16168	R	encoded by transcript ACA1_355590A; uncharacterized protein	complement(join(14792..15072,15132..15290,15351..15513,15588..15715,15785..15884,15947..>16168))	Acanthamoeba castellanii str. Neff	14922105
ACA1_355610	CDS	ACA1_355610	NW_004457588.1	18004	19086	R	encoded by transcript ACA1_355610A; cystathionine betalyase, putative	complement(join(18004..18069,18177..18309,18424..18499,18634..18712,18795..18973,19071..19086))	Acanthamoeba castellanii str. Neff	14922118
ACA1_355720	CDS	ACA1_355720	NW_004457588.1	22981	24556	R	encoded by transcript ACA1_355720A; uncharacterized protein	complement(join(<22981..23524,23685..24160,24248..24396,24417..24556))	Acanthamoeba castellanii str. Neff	14922120
ACA1_355730	CDS	ACA1_355730	NW_004457588.1	25343	26558	D	encoded by transcript ACA1_355730A; uncharacterized protein	join(25343..25389,25631..25968,26049..26122,26282..26344,26358..26558)	Acanthamoeba castellanii str. Neff	14922109
ACA1_355740	CDS	ACA1_355740	NW_004457588.1	26746	27066	R	encoded by transcript ACA1_355740A; uncharacterized protein	complement(join(26746..26823,26907..26991,27056..27066))	Acanthamoeba castellanii str. Neff	14922107
ACA1_355850	CDS	ACA1_355850	NW_004457588.1	31538	33446	R	encoded by transcript ACA1_355850A; methionine aminopeptidase, type I, putative	complement(join(31538..31588,31650..31760,31857..31921,32013..32156,32282..32484,32572..32723,32819..32913,33005..33109,33204..33248,33323..33446))	Acanthamoeba castellanii str. Neff	14922110
ACA1_355860	CDS	ACA1_355860	NW_004457588.1	34153	36886	D	encoded by transcript ACA1_355860A; uncharacterized protein	join(34153..34277,34427..34574,34652..34788,34887..34984,35059..35203,35280..35421,35495..35624,35760..35857,35936..36084,36169..36297,36391..36886)	Acanthamoeba castellanii str. Neff	14922112
ACA1_355970	CDS	ACA1_355970	NW_004457588.1	37761	38826	D	encoded by transcript ACA1_355970A; uncharacterized protein	join(37761..37856,37934..38028,38135..38316,38408..38573,38676..38826)	Acanthamoeba castellanii str. Neff	14922106
ACA1_355980	CDS	ACA1_355980	NW_004457588.1	39316	41488	D	encoded by transcript ACA1_355980A; Transmembrane amino acid transporter protein	join(39316..39636,39780..39846,39940..40121,40255..40807,40922..41075,41176..41488)	Acanthamoeba castellanii str. Neff	14922108
ACA1_355990	CDS	ACA1_355990	NW_004457588.1	41596	42087	R	encoded by transcript ACA1_355990A; uncharacterized protein	complement(41596..42087)	Acanthamoeba castellanii str. Neff	14922116
ACA1_356000	CDS	ACA1_356000	NW_004457588.1	42321	43588	R	encoded by transcript ACA1_356000A; uncharacterized protein	complement(join(42321..43345,43438..43588))	Acanthamoeba castellanii str. Neff	14922117
ACA1_277120	CDS	ACA1_277120	NW_004457586.1	21	504	D	encoded by transcript ACA1_277120A; uncharacterized protein	join(<21..214,423..504)	Acanthamoeba castellanii str. Neff	14922104
ACA1_277230	CDS	ACA1_277230	NW_004457586.1	1102	1631	R	encoded by transcript ACA1_277230A; uncharacterized protein	complement(join(1102..1219,1320..1465,1593..1631))	Acanthamoeba castellanii str. Neff	14921685
ACA1_277340	CDS	ACA1_277340	NW_004457586.1	3874	4724	R	encoded by transcript ACA1_277340A; cytochrome P450 monooxygenase, putative	complement(join(3874..3945,4019..4249,4322..4453,4479..4589,4656..4724))	Acanthamoeba castellanii str. Neff	14921686
ACA1_277350	CDS	ACA1_277350	NW_004457586.1	5693	11720	R	encoded by transcript ACA1_277350A; p53 inducible protein	complement(join(5693..6190,6277..6489,6551..6736,6840..7042,7122..7308,7409..7545,7668..8040,8134..8274,8358..8765,8858..9376,9466..9822,10032..10238,10337..10535,10677..10808,10896..11071,11158..11277,11356..11433,11535..11720))	Acanthamoeba castellanii str. Neff	14921687
ACA1_277360	CDS	ACA1_277360	NW_004457586.1	12360	13049	R	encoded by transcript ACA1_277360A; uncharacterized protein	complement(join(12360..12379,12549..12616,12742..13049))	Acanthamoeba castellanii str. Neff	14921688
ACA1_277370	CDS	ACA1_277370	NW_004457586.1	13198	17450	R	encoded by transcript ACA1_277370A; RFX DNA-binding domain containing protein	complement(join(13198..14487,14553..14652,14755..14843,14913..15034,15121..15314,15400..15599,15680..15729,15820..15968,16076..16334,16410..16528,16626..16708,16823..16952,17335..17450))	Acanthamoeba castellanii str. Neff	14921689
ACA1_277380	CDS	ACA1_277380	NW_004457586.1	18342	19986	R	encoded by transcript ACA1_277380A; uncharacterized protein	complement(join(18342..18552,18637..18725,18777..18901,18971..19059,19143..19256,19338..19431,19514..19622,19705..19754,19848..19986))	Acanthamoeba castellanii str. Neff	14921690
ACA1_277390	CDS	ACA1_277390	NW_004457586.1	20139	21130	R	encoded by transcript ACA1_277390A; RFX DNAbinding domain containing protein	complement(join(20139..20177,20210..20278,20373..20576,20648..20780,20853..21130))	Acanthamoeba castellanii str. Neff	14921691
ACA1_277400	CDS	ACA1_277400	NW_004457586.1	21329	25433	R	encoded by transcript ACA1_277400A; RFX DNA-binding domain containing protein	complement(join(21329..22393,22467..22563,22665..22863,22949..23028,23140..23241,23310..23512,23594..23643,23729..23877,23960..24741,24845..24977,25216..25433))	Acanthamoeba castellanii str. Neff	14921692
ACA1_277410	CDS	ACA1_277410	NW_004457586.1	26884	28690	R	encoded by transcript ACA1_277410A; SH3 domain containing protein	complement(join(26884..27068,27169..27471,27545..27731,27809..28007,28097..28182,28265..28336,28410..28521,28587..28690))	Acanthamoeba castellanii str. Neff	14921693
ACA1_277420	CDS	ACA1_277420	NW_004457586.1	29124	29786	R	encoded by transcript ACA1_277420A; adenylate kinase isoenzyme 6, putative	complement(join(29124..29319,29386..29531,29595..29786))	Acanthamoeba castellanii str. Neff	14921694
ACA1_277430	CDS	ACA1_277430	NW_004457586.1	29888	30565	D	encoded by transcript ACA1_277430A; uncharacterized protein	join(29888..30167,30210..30275,30360..30565)	Acanthamoeba castellanii str. Neff	14921695
ACA1_277440	CDS	ACA1_277440	NW_004457586.1	30673	37796	R	encoded by transcript ACA1_277440A; uncharacterized protein	complement(join(30673..30804,30921..31027,31116..31313,31384..31466,31589..31682,31758..31967,32081..32185,32297..32361,32452..32539,32625..32715,32829..32905,33041..33184,33294..33444,33567..33681,33829..33960,34066..34183,34305..34357,34518..35005,35076..35155,35249..35318,35484..35579,35691..35908,35984..36080,36202..36264,36371..36535,36614..36693,36762..36893,36997..37157,37235..37273,37372..37796))	Acanthamoeba castellanii str. Neff	14921696
ACA1_277460	CDS	ACA1_277460	NW_004457586.1	47857	54468	D	encoded by transcript ACA1_277460A; CrcB family protein	join(47857..48056,48455..48570,48592..48912,48994..49191,49258..49410,49547..49566,49689..49799,49865..49946,50038..50204,50285..50322,50413..50512,50593..50711,50782..50923,50993..51077,51177..51267,51369..51555,51624..51760,51840..52026,52124..52213,52290..52490,52555..52620,52685..52757,52867..52986,53078..53142,53216..53692,53775..54066,54142..54263,54397..54468)	Acanthamoeba castellanii str. Neff	14921698
ACA1_277470	CDS	ACA1_277470	NW_004457586.1	54746	58316	D	encoded by transcript ACA1_277470A; Frizzled/Smoothened family membrane region protein	join(54746..54762,54865..55026,55285..55327,55428..55539,55629..55705,55796..55872,56035..56200,56282..56344,56444..56527,56621..56767,56849..56959,57107..57250,57323..57367,57473..57560,57627..57687,57772..57868,57945..58049,58112..58176,58256..58316)	Acanthamoeba castellanii str. Neff	14921699
ACA1_277480	CDS	ACA1_277480	NW_004457586.1	58431	62070	R	encoded by transcript ACA1_277480A; DegPtype protease	complement(join(58431..58599,58638..58717,58890..58982,59069..59173,59224..59281,59373..59446,59558..59640,59741..59867,59967..60047,60135..60248,60335..60417,60509..60614,60722..60790,60874..60969,61083..61160,61235..61383,61452..61520,62019..62070))	Acanthamoeba castellanii str. Neff	14921700
ACA1_277490	CDS	ACA1_277490	NW_004457586.1	63163	63684	R	encoded by transcript ACA1_277490A; uncharacterized protein	complement(join(63163..63215,63239..63410,63459..63580,63633..63684))	Acanthamoeba castellanii str. Neff	14921701
ACA1_277500	CDS	ACA1_277500	NW_004457586.1	64284	66087	R	encoded by transcript ACA1_277500A; lariat debranching enzyme family protein	complement(join(64284..64294,64382..64536,64599..64723,64813..64999,65081..65178,65250..65335,65392..65513,65586..65650,65715..65807,66052..66087))	Acanthamoeba castellanii str. Neff	14921702
ACA1_277510	CDS	ACA1_277510	NW_004457586.1	66244	66761	R	encoded by transcript ACA1_277510A; uncharacterized protein	complement(join(66244..66394,66431..66470,66575..66761))	Acanthamoeba castellanii str. Neff	14921703
ACA1_277520	CDS	ACA1_277520	NW_004457586.1	67146	68824	D	encoded by transcript ACA1_277520A; triacylglycerol lipase	join(67146..67383,67482..67790,67877..67997,68083..68154,68220..68316,68443..68620,68694..68824)	Acanthamoeba castellanii str. Neff	14921704
ACA1_277530	CDS	ACA1_277530	NW_004457586.1	68945	70601	D	encoded by transcript ACA1_277530A; inositol polyphosphate multikinase alpha, putative	join(68945..69281,69370..69450,69550..69685,69849..69864,69992..70109,70217..70479,70527..70601)	Acanthamoeba castellanii str. Neff	14921705
ACA1_277540	CDS	ACA1_277540	NW_004457586.1	70966	72376	D	encoded by transcript ACA1_277540A; uncharacterized protein	join(70966..71589,71685..71759,71828..71911,71980..72071,72136..72376)	Acanthamoeba castellanii str. Neff	14921706
ACA1_277550	CDS	ACA1_277550	NW_004457586.1	72694	73883	D	encoded by transcript ACA1_277550A; NLR family, CARD domain containing 3, putative	join(72694..72789,72894..73124,73210..73371,73458..73547,73644..73883)	Acanthamoeba castellanii str. Neff	14921707
ACA1_277560	CDS	ACA1_277560	NW_004457586.1	74069	76498	R	encoded by transcript ACA1_277560A; Fbox domain containing protein	complement(join(74069..74127,74189..74362,74441..74553,74615..74736,74869..74974,75067..75156,75383..75471,75517..75585,75712..75786,75883..75977,76070..76181,76195..76237,76292..76332,76406..76498))	Acanthamoeba castellanii str. Neff	14921708
ACA1_277570	CDS	ACA1_277570	NW_004457586.1	79107	79623	D	encoded by transcript ACA1_277570A; uncharacterized protein	join(79107..79451,79522..79623)	Acanthamoeba castellanii str. Neff	14921709
ACA1_277580	CDS	ACA1_277580	NW_004457586.1	80006	81130	D	encoded by transcript ACA1_277580A; uncharacterized protein	80006..81130	Acanthamoeba castellanii str. Neff	14921710
ACA1_277590	CDS	ACA1_277590	NW_004457586.1	81601	83350	R	encoded by transcript ACA1_277590A; muramoyltetrapeptide carboxypeptidase	complement(join(81601..81704,81779..81888,82250..82307,82378..82511,82639..82748,82830..82927,83027..83167,83266..83350))	Acanthamoeba castellanii str. Neff	14921711
ACA1_277700	CDS	ACA1_277700	NW_004457586.1	83590	85571	R	encoded by transcript ACA1_277700A; WD repeat domain 57 (U5 snRNP specific), putative	complement(join(83590..83684,83796..83857,83922..83998,84090..84170,84246..84356,84424..84546,84672..84834,84922..85015,85171..85300,85396..85463,85538..85571))	Acanthamoeba castellanii str. Neff	14921712
ACA1_277710	CDS	ACA1_277710	NW_004457586.1	85734	86459	D	encoded by transcript ACA1_277710A; uncharacterized protein	join(85734..85794,85862..85942,86013..86134,86232..86459)	Acanthamoeba castellanii str. Neff	14921713
ACA1_277720	CDS	ACA1_277720	NW_004457586.1	86726	88351	D	encoded by transcript ACA1_277720A; CBS domain containing protein	join(86726..86962,87048..87116,87130..87286,87351..87495,87578..87697,87768..87876,87948..88016,88095..88177,88255..88351)	Acanthamoeba castellanii str. Neff	14922103
ACA1_277730	CDS	ACA1_277730	NW_004457586.1	88545	89716	D	encoded by transcript ACA1_277730A; shortchain dehydrogenase/reductase (SDR) family protein	join(88545..88607,88754..88789,88853..89029,89104..89232,89345..89431,89501..89591,89673..89716)	Acanthamoeba castellanii str. Neff	14921714
ACA1_277740	CDS	ACA1_277740	NW_004457586.1	90072	91341	D	encoded by transcript ACA1_277740A; MORN repeat-containing protein	join(90072..90311,90401..90567,90639..90718,90791..90848,90918..90986,91176..91341)	Acanthamoeba castellanii str. Neff	14921715
ACA1_277750	CDS	ACA1_277750	NW_004457586.1	91746	92447	R	encoded by transcript ACA1_277750A; Raslike protein 1, putative	complement(join(91746..92166,92254..92447))	Acanthamoeba castellanii str. Neff	14921716
ACA1_277770	CDS	ACA1_277770	NW_004457586.1	96028	97791	R	encoded by transcript ACA1_277770A; ice-binding protein	complement(join(96028..96798,97023..97712,97786..97791))	Acanthamoeba castellanii str. Neff	14921718
ACA1_277780	CDS	ACA1_277780	NW_004457586.1	98143	100109	D	encoded by transcript ACA1_277780A; Ca2+dependent endoplasmic reticulum nucleoside diphosphatase isoform 3, putative	join(98143..98451,98537..98598,98682..98787,98876..98942,99054..99148,99257..99327,99415..99500,99599..99723,99806..99892,99978..100109)	Acanthamoeba castellanii str. Neff	14921719
ACA1_277790	CDS	ACA1_277790	NW_004457586.1	100216	102852	R	encoded by transcript ACA1_277790A; protease, serine, 16 (thymus), putative	complement(join(100216..100319,100398..100522,100647..100707,100792..100963,101042..101131,101230..101337,101433..101518,101607..101710,101794..101852,101939..101990,102108..102207,102300..102377,102472..102565,102649..102852))	Acanthamoeba castellanii str. Neff	14921720
ACA1_277800	CDS	ACA1_277800	NW_004457586.1	103002	104987	R	encoded by transcript ACA1_277800A; zinc finger, C3HC4 type (RING finger) domain containing protein	complement(join(103002..103130,103638..104576,104661..104723,104793..104987))	Acanthamoeba castellanii str. Neff	14921721
ACA1_277810	CDS	ACA1_277810	NW_004457586.1	105191	107039	R	encoded by transcript ACA1_277810A; histone acetyltransferase family protein	complement(join(105191..105303,105392..105529,105608..105671,105737..105826,105910..105993,106076..106219,106301..106648,106671..107039))	Acanthamoeba castellanii str. Neff	14921722
ACA1_277830	CDS	ACA1_277830	NW_004457586.1	109454	111007	D	encoded by transcript ACA1_277830A; LIM domain containing protein	join(109454..110192,110263..110447,110529..110622,110706..111007)	Acanthamoeba castellanii str. Neff	14921724
ACA1_277840	CDS	ACA1_277840	NW_004457586.1	111760	112782	D	encoded by transcript ACA1_277840A; lipase	111760..112782	Acanthamoeba castellanii str. Neff	14921725
ACA1_277850	CDS	ACA1_277850	NW_004457586.1	112942	114531	R	encoded by transcript ACA1_277850A; PhytanoylCoA dioxygenase (PhyH) superfamily protein	complement(join(112942..113067,113145..113258,113327..113401,113491..113575,113657..113730,113801..113830,113921..114070,114151..114241,114302..114531))	Acanthamoeba castellanii str. Neff	14921726
ACA1_277860	CDS	ACA1_277860	NW_004457586.1	114706	115607	D	encoded by transcript ACA1_277860A; spherulin, putative	join(114706..114763,114824..115140,115209..115418,115482..115607)	Acanthamoeba castellanii str. Neff	14921727
ACA1_277870	CDS	ACA1_277870	NW_004457586.1	115793	116252	D	encoded by transcript ACA1_277870A; oxidoreductase, short chain dehydrogenase/reductase superfamily protein	join(115793..116036,116086..116252)	Acanthamoeba castellanii str. Neff	14921728
ACA1_277880	CDS	ACA1_277880	NW_004457586.1	117085	120027	D	encoded by transcript ACA1_277880A; IBR domain containing protein	join(117085..117166,117233..117294,117397..117533,117697..117787,117886..118018,118117..118255,118324..118445,118532..118607,118721..118798,118889..118949,119052..119164,119237..119301,119365..119477,119550..119652,119718..119888,119963..120027)	Acanthamoeba castellanii str. Neff	14921729
ACA1_277890	CDS	ACA1_277890	NW_004457586.1	120245	120931	R	encoded by transcript ACA1_277890A; uncharacterized protein	complement(join(120245..120343,120409..120501,120585..120709,120790..120931))	Acanthamoeba castellanii str. Neff	14921730
ACA1_277900	CDS	ACA1_277900	NW_004457586.1	121042	123097	R	encoded by transcript ACA1_277900A; uncharacterized protein	complement(join(121042..121161,121227..121451,121513..121695,121750..121968,122026..122205,122265..122473,122535..122633,122689..122814,122878..123097))	Acanthamoeba castellanii str. Neff	14921731
ACA1_277910	CDS	ACA1_277910	NW_004457586.1	123541	126799	R	encoded by transcript ACA1_277910A; anaphasepromoting complex subunit 2 isoform 2, putative	complement(join(123541..123806,123886..124053,124114..124283,124485..124657,124725..124787,124853..124941,125072..125217,125279..125398,125489..125611,125684..125856,125928..126252,126324..126475,126791..126799))	Acanthamoeba castellanii str. Neff	14921732
ACA1_277920	CDS	ACA1_277920	NW_004457586.1	127271	131460	D	encoded by transcript ACA1_277920A; BTB/POZ domain containing protein	join(127271..127484,127615..128218,128408..128434,128526..128708,128775..128877,129037..129155,129260..129353,129446..129595,129680..129938,130028..130233,130342..130496,130519..130622,130683..130705,130746..131142,131210..131460)	Acanthamoeba castellanii str. Neff	14921733
ACA1_277930	CDS	ACA1_277930	NW_004457586.1	131509	132092	D	encoded by transcript ACA1_277930A; ankyrin domain protein	join(131509..131722,131793..131878,131952..132092)	Acanthamoeba castellanii str. Neff	14921734
ACA1_277940	CDS	ACA1_277940	NW_004457586.1	132895	134587	R	encoded by transcript ACA1_277940A; cysteine protease 5, putative	complement(join(132895..133040,133294..133363,133450..133596,133681..133822,133943..134007,134135..134266,134342..134587))	Acanthamoeba castellanii str. Neff	14921735
ACA1_277950	CDS	ACA1_277950	NW_004457586.1	135761	138081	D	encoded by transcript ACA1_277950A; VHS domain containing protein	join(135761..135933,136045..136138,136288..138081)	Acanthamoeba castellanii str. Neff	14921736
ACA1_277960	CDS	ACA1_277960	NW_004457586.1	138942	139313	R	encoded by transcript ACA1_277960A; 60s Acidic ribosomal protein	complement(138942..139313)	Acanthamoeba castellanii str. Neff	14921737
ACA1_277970	CDS	ACA1_277970	NW_004457586.1	139692	141286	D	encoded by transcript ACA1_277970A; vacuolar protein sortingassociated protein 26, putative	join(139692..139905,140038..140194,140295..140488,140590..140670,140732..140800,140880..141022,141125..141286)	Acanthamoeba castellanii str. Neff	14921738
ACA1_277980	CDS	ACA1_277980	NW_004457586.1	142351	143483	D	encoded by transcript ACA1_277980A; mitochondrial rrna methyltransferase	join(142351..142406,142550..142655,142718..142776,143122..143210,143287..143483)	Acanthamoeba castellanii str. Neff	14921739
ACA1_277990	CDS	ACA1_277990	NW_004457586.1	144118	149559	D	encoded by transcript ACA1_277990A; calponin domain containing protein	join(144118..144193,144317..144475,144567..144671,144747..147222,147256..147560,147652..147836,147936..148063,148142..148268,148343..149339,149420..149559)	Acanthamoeba castellanii str. Neff	14921740
ACA1_278000	CDS	ACA1_278000	NW_004457586.1	150229	153070	D	encoded by transcript ACA1_278000A; carrier superfamily protein	join(<150229..150306,150327..150416,150524..150636,150705..150809,150894..150988,151088..151208,151323..151378,151515..151583,151675..151758,151868..152023,152124..152412,152488..152696,152795..152872,152958..153070)	Acanthamoeba castellanii str. Neff	14921741
ACA1_278010	CDS	ACA1_278010	NW_004457586.1	153822	155856	R	encoded by transcript ACA1_278010A; uncharacterized protein	complement(join(153822..154225,154324..154405,154420..154448,154473..154581,154682..154747,154831..155158,155255..155359,155472..155546,155642..155856))	Acanthamoeba castellanii str. Neff	14921742
ACA1_278020	CDS	ACA1_278020	NW_004457586.1	156031	158179	R	encoded by transcript ACA1_278020A; transporter, major facilitator subfamily protein	complement(join(156031..156276,156373..156503,156587..156707,156793..156978,157043..157289,157408..157535,157639..157766,157861..158179))	Acanthamoeba castellanii str. Neff	14921743
ACA1_278030	CDS	ACA1_278030	NW_004457586.1	158328	160651	D	encoded by transcript ACA1_278030A; cytochrome p450 superfamily protein	join(158328..158381,158458..158627,158743..158880,158975..159109,159212..159359,159420..159633,159718..159933,160063..160103,160211..160357,160445..160651)	Acanthamoeba castellanii str. Neff	14921744
ACA1_278040	CDS	ACA1_278040	NW_004457586.1	160749	162271	R	encoded by transcript ACA1_278040A; DIL domain containing protein	complement(join(160749..160899,160968..161108,161195..161346,161473..161920,162006..162271))	Acanthamoeba castellanii str. Neff	14921745
ACA1_278050	CDS	ACA1_278050	NW_004457586.1	162326	164161	R	encoded by transcript ACA1_278050A; uncharacterized protein	complement(join(162326..162579,162660..162716,162994..164161))	Acanthamoeba castellanii str. Neff	14921746
ACA1_278060	CDS	ACA1_278060	NW_004457586.1	164541	165186	R	encoded by transcript ACA1_278060A; uncharacterized protein	complement(join(164541..164731,164791..165022,165106..165186))	Acanthamoeba castellanii str. Neff	14921747
ACA1_278070	CDS	ACA1_278070	NW_004457586.1	165579	168230	R	encoded by transcript ACA1_278070A; IBR domain containing protein	complement(join(165579..165716,165793..165865,165947..165981,166054..166103,166172..166244,166324..166406,166489..166610,166692..166813,166825..166998,167098..167161,167250..167337,167431..167499,167579..167671,167788..167888,167971..168037,168110..168230))	Acanthamoeba castellanii str. Neff	14921748
ACA1_278080	CDS	ACA1_278080	NW_004457586.1	168489	169275	R	encoded by transcript ACA1_278080A; hemerythrin hhe cation binding subfamily protein	complement(join(168489..168666,168726..168859,168940..169023,169082..169155,169221..169275))	Acanthamoeba castellanii str. Neff	14921749
ACA1_278090	CDS	ACA1_278090	NW_004457586.1	169915	171231	D	encoded by transcript ACA1_278090A; uncharacterized protein	join(169915..169954,170031..170152,170236..171231)	Acanthamoeba castellanii str. Neff	14921750
ACA1_278100	CDS	ACA1_278100	NW_004457586.1	171468	173542	D	encoded by transcript ACA1_278100A; Fbox domain containing protein	join(171468..171536,171634..171658,171727..171766,171833..171866,172125..172205,172641..172844,172981..173079,173178..173288,173384..173542)	Acanthamoeba castellanii str. Neff	14921751
ACA1_278110	CDS	ACA1_278110	NW_004457586.1	173701	174575	D	encoded by transcript ACA1_278110A; CatecholO-methyltransferase domain containing protein 1, putative	join(173701..173919,174008..174251,174337..174575)	Acanthamoeba castellanii str. Neff	14921752
ACA1_278120	CDS	ACA1_278120	NW_004457586.1	174790	175509	R	encoded by transcript ACA1_278120A; GatB/YqeY domain containing protein	complement(join(174790..175241,175344..175509))	Acanthamoeba castellanii str. Neff	14921753
ACA1_278130	CDS	ACA1_278130	NW_004457586.1	176136	177280	R	encoded by transcript ACA1_278130A; GATA zinc finger domain containing protein	complement(join(176136..176481,176593..177229,177244..177280))	Acanthamoeba castellanii str. Neff	14921754
ACA1_278140	CDS	ACA1_278140	NW_004457586.1	178339	179411	R	encoded by transcript ACA1_278140A; uncharacterized protein	complement(join(178339..178645,178767..179159,179305..179411))	Acanthamoeba castellanii str. Neff	14921755
ACA1_278150	CDS	ACA1_278150	NW_004457586.1	179573	180911	R	encoded by transcript ACA1_278150A; uncharacterized protein	complement(join(179573..179697,179793..180073,180151..180194,180261..180355,180463..180508,180569..180648,180722..180911))	Acanthamoeba castellanii str. Neff	14921756
ACA1_278160	CDS	ACA1_278160	NW_004457586.1	181322	181629	R	encoded by transcript ACA1_278160A; uncharacterized protein	complement(join(181322..181329,181355..181450,181524..181629))	Acanthamoeba castellanii str. Neff	14921757
ACA1_278170	CDS	ACA1_278170	NW_004457586.1	182098	185768	R	encoded by transcript ACA1_278170A; RFX DNAbinding domain containing protein	complement(join(182098..182226,182322..182405,182517..182564,182648..182815,182903..183070,183152..183279,183362..183583,183664..183799,183879..184091,184176..184289,184398..184517,184613..184697,184768..184886,184968..185080,185226..185344,185469..185584,185694..185768))	Acanthamoeba castellanii str. Neff	14921758
ACA1_278180	CDS	ACA1_278180	NW_004457586.1	186228	187175	R	encoded by transcript ACA1_278180A; uncharacterized protein	complement(join(186228..186509,186658..186839,186939..187032,187104..187175))	Acanthamoeba castellanii str. Neff	14921759
ACA1_278190	CDS	ACA1_278190	NW_004457586.1	187279	188688	R	encoded by transcript ACA1_278190A; CDK-activating kinase assembly factor MAT1 protein	complement(join(187279..187446,187528..187565,187635..187730,187824..187938,188056..188240,188339..188412,188576..188688))	Acanthamoeba castellanii str. Neff	14921760
ACA1_278200	CDS	ACA1_278200	NW_004457586.1	189277	191824	D	encoded by transcript ACA1_278200A; uncharacterized protein	join(189277..189439,189540..189904,190011..190128,190217..190248,190319..190424,190513..190547,190704..190817,190911..191077,191153..191298,191416..191538,191620..191753,191774..191824)	Acanthamoeba castellanii str. Neff	14921761
ACA1_278310	CDS	ACA1_278310	NW_004457586.1	192703	195303	D	encoded by transcript ACA1_278310A; uncharacterized protein	join(192703..192808,192890..192975,193182..193322,193403..193465,193718..193801,193866..193961,194036..194090,194172..194246,194472..194617,194860..195123,195220..195303)	Acanthamoeba castellanii str. Neff	14921762
ACA1_278320	CDS	ACA1_278320	NW_004457586.1	195466	196491	D	encoded by transcript ACA1_278320A; acetyltransferase, GNAT superfamily protein	join(195466..195667,195759..195840,195923..195978,196057..196179,196319..196491)	Acanthamoeba castellanii str. Neff	14921763
ACA1_278330	CDS	ACA1_278330	NW_004457586.1	196647	198568	D	encoded by transcript ACA1_278330A; WH1 domain containing protein	join(196647..196718,196833..196973,197054..197150,197239..197399,197489..197581,197798..197878,198081..198348,198444..198568)	Acanthamoeba castellanii str. Neff	14921764
ACA1_278340	CDS	ACA1_278340	NW_004457586.1	199371	201686	D	encoded by transcript ACA1_278340A; RecF/RecN/SMC domain containing protein	199371..201686	Acanthamoeba castellanii str. Neff	14921765
ACA1_278350	CDS	ACA1_278350	NW_004457586.1	202226	205159	D	encoded by transcript ACA1_278350A; helicase associated domain containing protein	join(202226..203339,203445..205159)	Acanthamoeba castellanii str. Neff	14921766
ACA1_278460	CDS	ACA1_278460	NW_004457586.1	205949	207363	D	encoded by transcript ACA1_278460A; alkaline serine protease	join(205949..206056,206153..206250,206341..206435,206463..206503,206586..206742,206809..207162,207245..207363)	Acanthamoeba castellanii str. Neff	14921767
ACA1_278470	CDS	ACA1_278470	NW_004457586.1	212179	212997	R	encoded by transcript ACA1_278470A; peroxiredoxin, putative	complement(join(212179..212655,212875..212997))	Acanthamoeba castellanii str. Neff	14921768
ACA1_278480	CDS	ACA1_278480	NW_004457586.1	213340	213590	R	encoded by transcript ACA1_278480A; uncharacterized protein	complement(join(213340..213562,213574..213590))	Acanthamoeba castellanii str. Neff	14921769
ACA1_278590	CDS	ACA1_278590	NW_004457586.1	219487	219864	D	encoded by transcript ACA1_278590A; uncharacterized protein	join(219487..219575,219636..219864)	Acanthamoeba castellanii str. Neff	14921770
ACA1_278600	CDS	ACA1_278600	NW_004457586.1	221299	222307	D	encoded by transcript ACA1_278600A; uncharacterized protein	join(221299..221400,221500..221587,221662..221716,221812..222307)	Acanthamoeba castellanii str. Neff	14921771
ACA1_278610	CDS	ACA1_278610	NW_004457586.1	223679	225063	R	encoded by transcript ACA1_278610A; MC family transporter: phosphate, putative	complement(join(223679..223999,224057..224400,224594..224691,224915..225063))	Acanthamoeba castellanii str. Neff	14921772
ACA1_278620	CDS	ACA1_278620	NW_004457586.1	226765	227369	R	encoded by transcript ACA1_278620A; uncharacterized protein	complement(join(226765..226766,226805..226892,227021..227100,227285..227369))	Acanthamoeba castellanii str. Neff	14921773
ACA1_278630	CDS	ACA1_278630	NW_004457586.1	228093	229417	D	encoded by transcript ACA1_278630A; Ankyrin repeat/Protein kinase domain containing protein	join(228093..228843,229009..229150,229255..229417)	Acanthamoeba castellanii str. Neff	14921774
ACA1_278740	CDS	ACA1_278740	NW_004457586.1	231923	233308	R	encoded by transcript ACA1_278740A; ankyrin repeat domain containing protein 44, putative	complement(join(231923..231928,231974..232210,232369..232505,232634..232787,232882..233004,233084..233308))	Acanthamoeba castellanii str. Neff	14921775
ACA1_278750	CDS	ACA1_278750	NW_004457586.1	234204	237671	D	encoded by transcript ACA1_278750A; ankyrin repeat-containing protein	join(234204..235042,235144..235373,235459..235512,235601..235742,235847..235977,236057..236368,236476..236600,236683..236809,236901..237002,237093..237189,237265..237337,237414..237671)	Acanthamoeba castellanii str. Neff	14921776
ACA1_278760	CDS	ACA1_278760	NW_004457586.1	237854	238597	D	encoded by transcript ACA1_278760A; serine/threonine kinase, putative	join(237854..237901,238001..238031,238116..238185,238266..238445,238552..238597)	Acanthamoeba castellanii str. Neff	14921777
ACA1_278770	CDS	ACA1_278770	NW_004457586.1	238976	240390	D	encoded by transcript ACA1_278770A; uncharacterized protein	join(238976..239688,239730..240390)	Acanthamoeba castellanii str. Neff	14921778
ACA1_278780	CDS	ACA1_278780	NW_004457586.1	240575	241801	R	encoded by transcript ACA1_278780A; uncharacterized protein	complement(join(240575..240901,241017..241609,241729..241801))	Acanthamoeba castellanii str. Neff	14921779
ACA1_278790	CDS	ACA1_278790	NW_004457586.1	242241	242798	R	encoded by transcript ACA1_278790A; NADH dehydrogenase (ubiquinone), putative	complement(join(242241..242350,242433..242508,242580..242798))	Acanthamoeba castellanii str. Neff	14921780
ACA1_278800	CDS	ACA1_278800	NW_004457586.1	242897	243552	D	encoded by transcript ACA1_278800A; LIM domain containing protein	join(242897..242961,243064..243083,243207..243281,243432..243492,243522..243552)	Acanthamoeba castellanii str. Neff	14921781
ACA1_278810	CDS	ACA1_278810	NW_004457586.1	243852	246539	D	encoded by transcript ACA1_278810A; soluble pyridine nucleotide transhydrogenase	join(243852..244184,244315..244404,244494..244596,244693..244903,245037..245173,245270..245469,245624..245783,245845..246027,246113..246279,246363..246539)	Acanthamoeba castellanii str. Neff	14921782
ACA1_278820	CDS	ACA1_278820	NW_004457586.1	246720	250124	R	encoded by transcript ACA1_278820A; uncharacterized protein	complement(join(246720..246843,246947..248200,248275..248414,248481..248590,248681..248731,248800..248899,248950..249417,249498..250124))	Acanthamoeba castellanii str. Neff	14921783
ACA1_278830	CDS	ACA1_278830	NW_004457586.1	250391	251832	R	encoded by transcript ACA1_278830A; uncharacterized protein	complement(join(250391..250770,250875..251832))	Acanthamoeba castellanii str. Neff	14921784
ACA1_278840	CDS	ACA1_278840	NW_004457586.1	252664	253389	D	encoded by transcript ACA1_278840A; Rasrelated protein Rap-1, putative	join(252664..252796,252850..252933,253019..253389)	Acanthamoeba castellanii str. Neff	14921785
ACA1_278850	CDS	ACA1_278850	NW_004457586.1	254017	256793	D	encoded by transcript ACA1_278850A; uncharacterized protein	join(254017..254171,254270..254397,254478..254520,254848..254932,254949..255111,255234..256102,256299..256793)	Acanthamoeba castellanii str. Neff	14921786
ACA1_278860	CDS	ACA1_278860	NW_004457586.1	256918	260229	R	encoded by transcript ACA1_278860A; glycosylphosphatidylinositol anchor attachment 1 protein	complement(join(256918..256923,256971..257242,257338..257439,257511..257634,257736..257879,257957..258110,258183..258272,258371..258513,258625..258716,258801..258917,258999..259142,259223..259282,259394..259507,259590..259684,259751..259903,259970..260032,260195..260229))	Acanthamoeba castellanii str. Neff	14921787
ACA1_278870	CDS	ACA1_278870	NW_004457586.1	260695	263078	R	encoded by transcript ACA1_278870A; dual specificity phosphatase, catalytic domain containing protein	complement(join(260695..262515,262530..263078))	Acanthamoeba castellanii str. Neff	14921788
ACA1_278880	CDS	ACA1_278880	NW_004457586.1	263785	269406	D	encoded by transcript ACA1_278880A; uncharacterized protein	join(263785..264234,264304..264608,264689..265304,265420..265620,265697..265756,265837..265950,266051..266149,266222..266613,266680..266753,266831..267464,267541..267671,267761..267913,267989..268526,268608..268737,268825..269406)	Acanthamoeba castellanii str. Neff	14921789
ACA1_278890	CDS	ACA1_278890	NW_004457586.1	269626	270515	D	encoded by transcript ACA1_278890A; uncharacterized protein	join(<269626..270235,270322..270515)	Acanthamoeba castellanii str. Neff	14921790
ACA1_278900	CDS	ACA1_278900	NW_004457586.1	271102	273447	D	encoded by transcript ACA1_278900A; calpain large subunit, domain iii domain containing protein	join(271102..271265,271353..271851,271939..272443,272533..272601,272706..272854,272965..273223,273302..273447)	Acanthamoeba castellanii str. Neff	14921791
ACA1_278910	CDS	ACA1_278910	NW_004457586.1	273685	274300	R	encoded by transcript ACA1_278910A; uncharacterized protein	complement(join(273685..273908,273991..274300))	Acanthamoeba castellanii str. Neff	14921792
ACA1_278920	CDS	ACA1_278920	NW_004457586.1	274705	277466	D	encoded by transcript ACA1_278920A; ABC1 domain containing protein	join(274705..275045,275138..275183,275246..275437,275475..275609,275692..275824,275941..276046,276121..276275,276369..276667,276758..276854,276940..277048,277139..277466)	Acanthamoeba castellanii str. Neff	14921793
ACA1_278930	CDS	ACA1_278930	NW_004457586.1	277544	280429	D	encoded by transcript ACA1_278930A; RNA recognition motif domain containing protein	join(277544..277799,277901..277951,278025..278103,278207..278384,278470..279498,279633..279824,279899..280083,280154..280201,280312..280429)	Acanthamoeba castellanii str. Neff	14921794
ACA1_278940	CDS	ACA1_278940	NW_004457586.1	280801	281829	D	encoded by transcript ACA1_278940A; carbonate dehydratase	join(280801..280965,281055..281257,281326..281456,281486..281829)	Acanthamoeba castellanii str. Neff	14921795
ACA1_278950	CDS	ACA1_278950	NW_004457586.1	282089	284344	R	encoded by transcript ACA1_278950A; serine palmitoyltransferase, long chain base subunit 2, putative	complement(join(282089..282247,282331..282487,282551..282687,282783..282868,282884..282927,282951..283194,283282..283375,283522..283646,283773..284076,284144..284344))	Acanthamoeba castellanii str. Neff	14921796
ACA1_278960	CDS	ACA1_278960	NW_004457586.1	284776	286929	R	encoded by transcript ACA1_278960A; uncharacterized protein	complement(join(284776..284866,284971..285134,285220..285285,285381..285492,285578..285690,285778..285834,285903..285993,286081..286189,286229..286355,286435..286929))	Acanthamoeba castellanii str. Neff	14921797
ACA1_278970	CDS	ACA1_278970	NW_004457586.1	287344	287961	R	encoded by transcript ACA1_278970A; uncharacterized protein	complement(287344..287961)	Acanthamoeba castellanii str. Neff	14921798
ACA1_278980	CDS	ACA1_278980	NW_004457586.1	288451	290406	R	encoded by transcript ACA1_278980A; extracellular ligandbinding receptor, putative	complement(join(288451..288827,288907..288992,289070..289208,289293..289392,289485..289584,289661..289721,289824..290219,290304..290406))	Acanthamoeba castellanii str. Neff	14921799
ACA1_278990	CDS	ACA1_278990	NW_004457586.1	290691	291366	D	encoded by transcript ACA1_278990A; uncharacterized protein	join(290691..290850,290981..291366)	Acanthamoeba castellanii str. Neff	14921800
ACA1_279000	CDS	ACA1_279000	NW_004457586.1	291527	292478	D	encoded by transcript ACA1_279000A; uncharacterized protein	join(291527..291746,291833..291876,291947..292041,292123..292159,292252..292333,292420..292478)	Acanthamoeba castellanii str. Neff	14921801
ACA1_279010	CDS	ACA1_279010	NW_004457586.1	292881	293624	D	encoded by transcript ACA1_279010A; RND efflux system outer membrane lipoprotein	join(292881..292998,293084..293222,293303..293415,293482..293624)	Acanthamoeba castellanii str. Neff	14921802
ACA1_279020	CDS	ACA1_279020	NW_004457586.1	293733	296507	R	encoded by transcript ACA1_279020A; EF hand domain containing protein	complement(join(293733..294363,294450..294580,294655..295026,295130..295271,295363..295546,295635..295722,295809..295866,295950..296031,296131..296367,296456..296507))	Acanthamoeba castellanii str. Neff	14921803
ACA1_279030	CDS	ACA1_279030	NW_004457586.1	296797	299925	R	encoded by transcript ACA1_279030A; RhoGEF domain containing protein	complement(join(296797..296955,297041..297205,297298..297440,297521..297697,297773..297930,298004..298157,298229..298363,298441..298645,298719..298883,298958..298985,299073..299245,299325..299510,299582..299670,299838..299925))	Acanthamoeba castellanii str. Neff	14921804
ACA1_279040	CDS	ACA1_279040	NW_004457586.1	300373	301054	D	encoded by transcript ACA1_279040A; uncharacterized protein	join(300373..300539,300608..300747,300808..300879,300945..301054)	Acanthamoeba castellanii str. Neff	14921805
ACA1_279050	CDS	ACA1_279050	NW_004457586.1	301301	302131	R	encoded by transcript ACA1_279050A; COP9 subunit 8, putative	complement(join(301301..301443,301574..301937,302030..302131))	Acanthamoeba castellanii str. Neff	14921806
ACA1_279070	CDS	ACA1_279070	NW_004457586.1	320454	322836	D	encoded by transcript ACA1_279070A; uncharacterized protein	join(320454..320838,320902..321074,321180..321347,321482..321686,321792..321936,322029..322252,322354..322452,322540..322638,322730..322836)	Acanthamoeba castellanii str. Neff	14921808
ACA1_279080	CDS	ACA1_279080	NW_004457586.1	322854	323271	D	encoded by transcript ACA1_279080A; uncharacterized protein	join(322854..323033,323095..323271)	Acanthamoeba castellanii str. Neff	14921809
ACA1_279090	CDS	ACA1_279090	NW_004457586.1	323371	325024	R	encoded by transcript ACA1_279090A; BioY protein, putative	complement(join(323371..323425,323514..323588,323674..323782,323864..323936,324006..324065,324130..324284,324356..324466,324531..324610,324675..325024))	Acanthamoeba castellanii str. Neff	14921810
ACA1_279200	CDS	ACA1_279200	NW_004457586.1	325847	331017	R	encoded by transcript ACA1_279200A; calponin domain containing protein	complement(join(325847..325910,326022..326158,326252..326347,326476..326607,326681..326809,326910..329301,329360..329694,329823..330246,330343..330469,330777..330856,330980..331017))	Acanthamoeba castellanii str. Neff	14921811
ACA1_279210	CDS	ACA1_279210	NW_004457586.1	331210	332512	D	encoded by transcript ACA1_279210A; Fbox domain containing protein	join(331210..331677,331759..331822,331880..332061,332135..332378,332460..332512)	Acanthamoeba castellanii str. Neff	14921812
ACA1_279220	CDS	ACA1_279220	NW_004457586.1	332698	334950	R	encoded by transcript ACA1_279220A; methyltransferase domain containing protein	complement(join(332698..332861,332932..333039,333180..333421,333507..333634,333741..333825,333938..334149,334236..334316,334375..334479,334592..334707,334779..334843,334937..334950))	Acanthamoeba castellanii str. Neff	14921813
ACA1_279230	CDS	ACA1_279230	NW_004457586.1	335342	337019	D	encoded by transcript ACA1_279230A; membrane protein insertase, YidC/Oxa1 subfamily protein	join(335342..335389,335466..335735,335809..335857,336050..336126,336212..336320,336388..336506,336617..336718,336813..337019)	Acanthamoeba castellanii str. Neff	14921814
ACA1_279240	CDS	ACA1_279240	NW_004457586.1	337482	339668	R	encoded by transcript ACA1_279240A; WD domain, Gbeta repeat-containing protein	complement(join(337482..337703,337751..337911,337989..338070,338281..338348,338414..338567,338654..338762,338859..338986,339002..339056,339132..339239,339331..339511,339650..339668))	Acanthamoeba castellanii str. Neff	14921815
ACA1_279250	CDS	ACA1_279250	NW_004457586.1	339977	341124	D	encoded by transcript ACA1_279250A; PB1 domain containing protein	join(339977..340842,340857..341124)	Acanthamoeba castellanii str. Neff	14921816
ACA1_279260	CDS	ACA1_279260	NW_004457586.1	341456	343964	R	encoded by transcript ACA1_279260A; elongation factor Tu Cterminal domain containing protein	complement(join(341456..341660,341747..341866,341913..341919,342074..342338,342424..342513,342646..343262,343323..343536,343600..343688,343772..343964))	Acanthamoeba castellanii str. Neff	14921817
ACA1_279270	CDS	ACA1_279270	NW_004457586.1	344525	345399	D	encoded by transcript ACA1_279270A; DNA ligase IIIlike protein	join(344525..344789,344861..345399)	Acanthamoeba castellanii str. Neff	14921818
ACA1_279280	CDS	ACA1_279280	NW_004457586.1	345516	347513	R	encoded by transcript ACA1_279280A; Lcarnitine dehydratase/bile acid-inducible protein F, putative	complement(join(345516..345695,345772..345858,345922..346015,346087..346251,346319..346446,346540..346662,346743..346980,347099..347315,347462..347513))	Acanthamoeba castellanii str. Neff	14921819
ACA1_279290	CDS	ACA1_279290	NW_004457586.1	348048	350047	D	encoded by transcript ACA1_279290A; MORN repeatcontaining protein	join(348048..348627,348698..348868,348941..349070,349133..349321,349390..349468,349547..350047)	Acanthamoeba castellanii str. Neff	14921820
ACA1_279300	CDS	ACA1_279300	NW_004457586.1	350600	350962	D	encoded by transcript ACA1_279300A; uncharacterized protein	350600..350962	Acanthamoeba castellanii str. Neff	14921821
ACA1_279310	CDS	ACA1_279310	NW_004457586.1	351388	354618	D	encoded by transcript ACA1_279310A; uncharacterized protein	join(351388..351508,351758..351896,351976..352092,352160..352376,352457..352867,352938..353075,353163..353861,354002..354106,354210..354298,354353..354462,354536..354618)	Acanthamoeba castellanii str. Neff	14921822
ACA1_279320	CDS	ACA1_279320	NW_004457586.1	355077	359351	D	encoded by transcript ACA1_279320A; RhoGAP domain containing protein	join(355077..355175,355206..355406,355571..355718,355796..355963,356065..356135,356247..356366,356444..356611,356709..356841,356904..357017,357128..357334,357421..357502,357597..357695,357800..357896,357979..358147,358287..358396,358482..358547,358654..358842,358916..359097,359201..359351)	Acanthamoeba castellanii str. Neff	14921823
ACA1_279330	CDS	ACA1_279330	NW_004457586.1	359630	366757	R	encoded by transcript ACA1_279330A; serine/threonine protein kinase	complement(join(359630..360025,360122..360327,360421..360903,361015..361277,361359..362103,362220..362367,362476..362537,362629..362725,362796..362933,363000..363259,363395..363645,363722..363869,363963..364098,364190..364330,364421..364589,364668..364746,364818..365167,365254..365567,365660..365939,366108..366265,366380..366440,366503..366605,366691..366757))	Acanthamoeba castellanii str. Neff	14921824
ACA1_279340	CDS	ACA1_279340	NW_004457586.1	366924	369545	R	encoded by transcript ACA1_279340A; ATPdependent DNA ligase domain containing protein	complement(join(366924..367223,367301..367498,367586..367738,367822..368055,368133..368204,368276..368352,368405..368465,368551..368646,368717..369160,369242..369346,369402..369545))	Acanthamoeba castellanii str. Neff	14921825
ACA1_279350	CDS	ACA1_279350	NW_004457586.1	369932	370433	R	encoded by transcript ACA1_279350A; uncharacterized protein	complement(join(369932..370028,370092..370278,370349..>370433))	Acanthamoeba castellanii str. Neff	14921826
ACA1_279360	CDS	ACA1_279360	NW_004457586.1	370914	372194	R	encoded by transcript ACA1_279360A; uncharacterized protein	complement(join(370914..371146,371211..371344,371442..371531,371614..371693,371766..372194))	Acanthamoeba castellanii str. Neff	14921827
ACA1_279370	CDS	ACA1_279370	NW_004457586.1	372447	373854	D	encoded by transcript ACA1_279370A; tetratricopeptide repeat domain containing protein	join(372447..372567,372704..372730,372758..373497,373609..373854)	Acanthamoeba castellanii str. Neff	14921828
ACA1_279380	CDS	ACA1_279380	NW_004457586.1	374187	374786	D	encoded by transcript ACA1_279380A; thioesterase family domain containing protein	join(374187..374375,374433..374543,374631..374786)	Acanthamoeba castellanii str. Neff	14921829
ACA1_279390	CDS	ACA1_279390	NW_004457586.1	374881	377787	R	encoded by transcript ACA1_279390A; helicase C-terminal domain containing protein, putative	complement(join(374881..375470,375604..375717,375829..375918,376011..376095,376163..376282,376386..377217,377379..377505,377568..377787))	Acanthamoeba castellanii str. Neff	14921830
ACA1_279400	CDS	ACA1_279400	NW_004457586.1	377846	379355	R	encoded by transcript ACA1_279400A; helicaselike transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily	complement(join(377846..378033,378130..378260,378329..378521,378605..378907,378978..379095,379176..379247,379338..379355))	Acanthamoeba castellanii str. Neff	14921831
ACA1_279410	CDS	ACA1_279410	NW_004457586.1	379674	380230	D	encoded by transcript ACA1_279410A; uncharacterized protein	join(379674..379682,379788..379894,380038..380120,380217..380230)	Acanthamoeba castellanii str. Neff	14921832
ACA1_279420	CDS	ACA1_279420	NW_004457586.1	381282	382630	D	encoded by transcript ACA1_279420A; BAR domain containing protein	join(381282..381677,381803..381866,381973..382284,382423..382489,382567..382630)	Acanthamoeba castellanii str. Neff	14921833
ACA1_279430	CDS	ACA1_279430	NW_004457586.1	382782	384187	R	encoded by transcript ACA1_279430A; cytosolic fes cluster assembling factor nbp35, putative	complement(join(382782..382822,382913..383099,383233..383343,383435..383589,383716..384187))	Acanthamoeba castellanii str. Neff	14921834
ACA1_279440	CDS	ACA1_279440	NW_004457586.1	384345	385440	D	encoded by transcript ACA1_279440A; Hypothetical protein	join(384345..384455,384539..385049,385111..385215,385283..385440)	Acanthamoeba castellanii str. Neff	14921835
ACA1_279450	CDS	ACA1_279450	NW_004457586.1	385650	387712	D	encoded by transcript ACA1_279450A; MORN repeat-containing protein	join(385650..386036,386093..386433,386572..386730,386801..387024,387114..387239,387480..387712)	Acanthamoeba castellanii str. Neff	14921836
ACA1_279460	CDS	ACA1_279460	NW_004457586.1	388075	392389	D	encoded by transcript ACA1_279460A; uncharacterized protein	join(388075..388212,388309..388476,388554..388671,388787..389003,389086..389410,389528..389596,389699..389766,389841..389980,390051..390134,390257..390456,390568..390736,390821..390963,391141..391461,391582..391680,391756..391842,391924..392022,392096..392230,392309..392389)	Acanthamoeba castellanii str. Neff	14921837
ACA1_279470	CDS	ACA1_279470	NW_004457586.1	392603	394363	R	encoded by transcript ACA1_279470A; uncharacterized protein	complement(392603..394363)	Acanthamoeba castellanii str. Neff	14921838
ACA1_279480	CDS	ACA1_279480	NW_004457586.1	394958	400109	D	encoded by transcript ACA1_279480A; protein kinase domain containing protein	join(394958..395109,395189..396428,396498..397462,397547..397772,397850..397946,398038..399689,399774..400109)	Acanthamoeba castellanii str. Neff	14921839
ACA1_279490	CDS	ACA1_279490	NW_004457586.1	400222	401322	R	encoded by transcript ACA1_279490A; SPFH domain / Band 7 domain containing protein	complement(join(400222..400301,400373..400644,400883..400989,401079..401153,401281..401322))	Acanthamoeba castellanii str. Neff	14921840
ACA1_279500	CDS	ACA1_279500	NW_004457586.1	401460	404268	R	encoded by transcript ACA1_279500A; uncharacterized protein	complement(join(401460..401680,401792..402022,402103..402238,402335..402505,402587..402744,402817..402976,403048..403195,403295..403410,403534..403824,403950..404067,404192..404268))	Acanthamoeba castellanii str. Neff	14921841
ACA1_279510	CDS	ACA1_279510	NW_004457586.1	404844	407710	R	encoded by transcript ACA1_279510A; transcription elongation factor sii protein n terminal domain containing protein	complement(join(404844..405192,405315..406047,406164..406305,406383..406747,406823..406971,407057..407205,407296..407521,407607..407710))	Acanthamoeba castellanii str. Neff	14921842
ACA1_279520	CDS	ACA1_279520	NW_004457586.1	408011	409137	R	encoded by transcript ACA1_279520A; uncharacterized protein	complement(join(408011..408151,408261..408373,408435..408504,408577..408725,408819..409137))	Acanthamoeba castellanii str. Neff	14921843
ACA1_279530	CDS	ACA1_279530	NW_004457586.1	409559	410663	D	encoded by transcript ACA1_279530A; Rab4, putative	join(409559..409658,409720..409815,409892..409910,409984..410046,410126..410311,410392..410460,410555..410663)	Acanthamoeba castellanii str. Neff	14921844
ACA1_279540	CDS	ACA1_279540	NW_004457586.1	411125	411700	R	encoded by transcript ACA1_279540A; nuclear transport factor 2 (ntf2) domain containing protein	complement(join(411125..411303,411374..411554,411638..411700))	Acanthamoeba castellanii str. Neff	14921845
ACA1_279550	CDS	ACA1_279550	NW_004457586.1	411835	413562	R	encoded by transcript ACA1_279550A; CBS domain containing protein	complement(join(411835..411990,412120..412272,412360..412516,412591..412669,412786..412850,412951..413027,413130..413156,413263..413562))	Acanthamoeba castellanii str. Neff	14921846
ACA1_279560	CDS	ACA1_279560	NW_004457586.1	413645	415505	R	encoded by transcript ACA1_279560A; iron hydrogenase assembly protein	complement(join(413645..413936,414004..414376,414439..414551,414627..414745,414814..414951,415020..415118,415191..415307,415371..415505))	Acanthamoeba castellanii str. Neff	14921847
ACA1_279570	CDS	ACA1_279570	NW_004457586.1	415893	417843	D	encoded by transcript ACA1_279570A; radical SAM domain containing protein	join(415893..416051,416119..416173,416234..416343,416423..416486,416548..416623,416705..416945,417006..417259,417336..417529,417602..417843)	Acanthamoeba castellanii str. Neff	14921848
ACA1_279580	CDS	ACA1_279580	NW_004457586.1	418211	420021	D	encoded by transcript ACA1_279580A; Interferonrelated developmental regulator 1, putative	join(418211..418232,418362..418500,418588..418668,418760..418943,419047..419514,419599..419727,419815..420021)	Acanthamoeba castellanii str. Neff	14921849
ACA1_279590	CDS	ACA1_279590	NW_004457586.1	420582	421748	R	encoded by transcript ACA1_279590A; uncharacterized protein	complement(join(420582..420973,420996..421241,421306..421387,421605..421748))	Acanthamoeba castellanii str. Neff	14921850
ACA1_279600	CDS	ACA1_279600	NW_004457586.1	422989	424395	R	encoded by transcript ACA1_279600A; uncharacterized protein	complement(join(422989..423552,423656..423937,424042..424395))	Acanthamoeba castellanii str. Neff	14921851
ACA1_279610	CDS	ACA1_279610	NW_004457586.1	425425	425861	D	encoded by transcript ACA1_279610A; kelch repeatcontaining protein	join(425425..425491,425542..425861)	Acanthamoeba castellanii str. Neff	14921852
ACA1_279620	CDS	ACA1_279620	NW_004457586.1	425967	427141	D	encoded by transcript ACA1_279620A; uncharacterized protein	join(425967..426298,426459..426594,426681..426807,426879..427141)	Acanthamoeba castellanii str. Neff	14921853
ACA1_279630	CDS	ACA1_279630	NW_004457586.1	427260	432536	D	encoded by transcript ACA1_279630A; HEAT repeat domain containing protein	join(427260..427436,427552..427673,427784..428177,428264..428380,428475..428602,428714..428903,428984..429203,429282..429413,429626..429810,429893..429979,430070..430577,430681..430826,430914..430998,431079..431170,431288..431416,431502..431834,431901..432005,432069..432156,432294..432362,432493..432536)	Acanthamoeba castellanii str. Neff	14921854
ACA1_279740	CDS	ACA1_279740	NW_004457586.1	433464	435002	D	encoded by transcript ACA1_279740A; hydrogenase assembly factor, putative	join(433464..433643,433736..433856,433935..434768,434851..435002)	Acanthamoeba castellanii str. Neff	14921855
ACA1_279750	CDS	ACA1_279750	NW_004457586.1	435231	438880	R	encoded by transcript ACA1_279750A; WH1 domain containing protein	complement(join(435231..435916,436020..436306,436368..436441,436527..437399,437482..438182,438281..438316,438411..438576,438649..438805,438876..438880))	Acanthamoeba castellanii str. Neff	14921856
ACA1_279760	CDS	ACA1_279760	NW_004457586.1	439617	442047	R	encoded by transcript ACA1_279760A; PWI domain containing protein	complement(join(439617..439683,439802..439995,440073..440337,440411..441821,441903..442047))	Acanthamoeba castellanii str. Neff	14921857
ACA1_279770	CDS	ACA1_279770	NW_004457586.1	442154	444573	R	encoded by transcript ACA1_279770A; molybdenum cofactor biosynthesis protein A, putative	complement(join(442154..442227,442262..442274,442319..442711,442797..442870,443193..443910,443996..444147,444242..444416,444487..>444573))	Acanthamoeba castellanii str. Neff	14921858
ACA1_279780	CDS	ACA1_279780	NW_004457586.1	444753	445004	D	encoded by transcript ACA1_279780A; molybdopterin synthase small subunit MOCS2A family protein	444753..445004	Acanthamoeba castellanii str. Neff	14921859
ACA1_279790	CDS	ACA1_279790	NW_004457586.1	445607	446896	R	encoded by transcript ACA1_279790A; serine/threonine kinase 19 isoform 2 isoform 5, putative	complement(join(445607..445819,445900..446071,446135..446246,446313..446466,446533..446678,446767..446896))	Acanthamoeba castellanii str. Neff	14921860
ACA1_279800	CDS	ACA1_279800	NW_004457586.1	447078	453789	D	encoded by transcript ACA1_279800A; Peroxin 11c (Pex11c), putative	join(447078..447484,447558..447641,447738..447961,448202..448375,448468..448527,448612..448747,448931..449051,449077..449368,449454..449696,449951..450041,450126..450280,450366..450441,450514..450652,450731..450995,451067..451198,451264..451376,451412..452257,452307..452504,452518..453231,453305..453395,453413..453789)	Acanthamoeba castellanii str. Neff	14921861
ACA1_280010	CDS	ACA1_280010	NW_004457586.1	453889	455817	D	encoded by transcript ACA1_280010A; uncharacterized protein	join(453889..454381,454482..454596,454697..454844,454936..455817)	Acanthamoeba castellanii str. Neff	14921862
ACA1_280020	CDS	ACA1_280020	NW_004457586.1	455973	457789	D	encoded by transcript ACA1_280020A; uncharacterized protein	join(455973..456530,456632..456719,456805..456875,456961..457213,457315..457597,457651..457789)	Acanthamoeba castellanii str. Neff	14921863
ACA1_280030	CDS	ACA1_280030	NW_004457586.1	457974	459378	D	encoded by transcript ACA1_280030A; hydrolase, carbonnitrogen superfamily protein	join(457974..458207,458294..458363,458441..458559,458637..458927,459020..459234,459324..459334,459347..459378)	Acanthamoeba castellanii str. Neff	14921864
ACA1_280140	CDS	ACA1_280140	NW_004457586.1	462347	462957	D	encoded by transcript ACA1_280140A; uncharacterized protein	join(<462347..462493,462562..462692,462772..>462957)	Acanthamoeba castellanii str. Neff	14921865
ACA1_280260	CDS	ACA1_280260	NW_004457586.1	467333	467956	R	encoded by transcript ACA1_280260A; uncharacterized protein	complement(join(467333..467427,467506..467578,467702..>467956))	Acanthamoeba castellanii str. Neff	14921867
ACA1_280270	CDS	ACA1_280270	NW_004457586.1	468039	470046	R	encoded by transcript ACA1_280270A; Phospholipase	complement(join(468039..468102,468186..468258,468369..468623,468720..468906,468979..469058,469135..469320,469413..469489,469525..469687,469818..470046))	Acanthamoeba castellanii str. Neff	14921868
ACA1_280280	CDS	ACA1_280280	NW_004457586.1	470210	471734	R	encoded by transcript ACA1_280280A; acetyltransferase, GNAT superfamily protein	complement(join(470210..470919,471031..471187,471276..471334,471407..471538,471626..471734))	Acanthamoeba castellanii str. Neff	14921869
ACA1_280290	CDS	ACA1_280290	NW_004457586.1	471900	481627	R	encoded by transcript ACA1_280290A; ATPase/histidine kinase/DNA gyrase B/HSP90 domain containing protein	complement(join(471900..472060,472137..472227,472307..472918,472943..473209,473287..473570,473669..474886,474994..475087,475182..475422,475510..475844,475940..476125,476207..476340,476427..476549,476624..476797,476902..477075,477167..477288,477310..477365,477461..477547,477659..477978,478051..478149,478242..478434,478547..478704,478785..478908,479001..479117,479189..479350,479434..479580,479669..479962,480035..480199,480320..480575,480655..480977,481208..481627))	Acanthamoeba castellanii str. Neff	14921870
ACA1_280300	CDS	ACA1_280300	NW_004457586.1	482171	484391	R	encoded by transcript ACA1_280300A; protein kinase domain containing protein	complement(join(482171..482431,482563..482696,482782..482899,482999..483134,483444..483766,483972..484391))	Acanthamoeba castellanii str. Neff	14921871
ACA1_280510	CDS	ACA1_280510	NW_004457586.1	485445	487306	R	encoded by transcript ACA1_280510A; uncharacterized protein	complement(join(485445..485496,485601..485739,485846..485972,486047..486189,486326..486423,486518..486570,486744..486904,487003..487306))	Acanthamoeba castellanii str. Neff	14921872
ACA1_280520	CDS	ACA1_280520	NW_004457586.1	487398	489378	R	encoded by transcript ACA1_280520A; C2 domain containing protein	complement(join(487398..487466,487500..487728,487797..488002,488021..488154,488232..488444,488520..488734,488809..488936,489012..489151,489228..489378))	Acanthamoeba castellanii str. Neff	14921873
ACA1_280530	CDS	ACA1_280530	NW_004457586.1	489551	490353	R	encoded by transcript ACA1_280530A; uncharacterized protein	complement(join(489551..489644,489726..489996,490019..490147,490221..490353))	Acanthamoeba castellanii str. Neff	14921874
ACA1_280540	CDS	ACA1_280540	NW_004457586.1	490699	491418	D	encoded by transcript ACA1_280540A; uncharacterized protein	join(490699..490736,490846..490981,491076..491177,491263..491418)	Acanthamoeba castellanii str. Neff	14921875
ACA1_280550	CDS	ACA1_280550	NW_004457586.1	491494	492578	R	encoded by transcript ACA1_280550A; RSNARE, VAMP71-family	complement(join(491494..491553,491664..491824,491974..492064,492128..492197,492282..492323,492430..492578))	Acanthamoeba castellanii str. Neff	14921876
ACA1_280570	CDS	ACA1_280570	NW_004457586.1	497356	501583	D	encoded by transcript ACA1_280570A; Znfinger in Ran binding protein and others domain containing protein	join(497356..497657,497751..497885,497986..498286,498369..498567,498650..498745,498941..499483,499591..499790,499869..500072,500090..500237,500324..500454,500540..500839,500904..501045,501128..501342,501413..501583)	Acanthamoeba castellanii str. Neff	14921878
ACA1_280580	CDS	ACA1_280580	NW_004457586.1	501696	502040	R	encoded by transcript ACA1_280580A; uncharacterized protein	complement(join(501696..501822,501895..502040))	Acanthamoeba castellanii str. Neff	14921879
ACA1_280590	CDS	ACA1_280590	NW_004457586.1	502345	503173	D	encoded by transcript ACA1_280590A; Poly(ADPribose) polymerase and DNA-Ligase Zn-finger region domain containing protein	join(502345..502496,502630..503173)	Acanthamoeba castellanii str. Neff	14921880
ACA1_280600	CDS	ACA1_280600	NW_004457586.1	503348	504340	D	encoded by transcript ACA1_280600A; phosphoribosylpyrophosphate synthetase	join(503348..503545,503609..504340)	Acanthamoeba castellanii str. Neff	14921881
ACA1_280610	CDS	ACA1_280610	NW_004457586.1	504548	508025	D	encoded by transcript ACA1_280610A; metallobeta-lactamase domain containing protein	join(504548..504770,504882..505215,505230..505378,505472..505620,505721..505838,505912..506654,506768..507195,507283..507473,507562..508025)	Acanthamoeba castellanii str. Neff	14921882
ACA1_280620	CDS	ACA1_280620	NW_004457586.1	508105	510515	R	encoded by transcript ACA1_280620A; uncharacterized protein	complement(join(508105..508283,508382..508789,509019..509187,509362..509700,509791..509922,509997..510136,510213..510302,510395..510515))	Acanthamoeba castellanii str. Neff	14921883
ACA1_280630	CDS	ACA1_280630	NW_004457586.1	510795	513690	R	encoded by transcript ACA1_280630A; Zinc finger, DHHC domain containing 17, putative	complement(join(510795..510936,511066..511187,511266..511342,511436..511613,511714..511901,512010..512250,512319..512477,512597..512757,512846..512972,513080..513188,513286..513415,513561..513690))	Acanthamoeba castellanii str. Neff	14921884
ACA1_280640	CDS	ACA1_280640	NW_004457586.1	514036	517844	R	encoded by transcript ACA1_280640A; PH domain/RhoGEF domain containing protein	complement(join(514036..514154,514265..514475,514577..514741,514834..515142,515227..515384,515457..516161,516261..516361,516439..516533,516629..516815,516932..516999,517085..517192,517323..517493,517584..517844))	Acanthamoeba castellanii str. Neff	14921885
ACA1_280650	CDS	ACA1_280650	NW_004457586.1	518236	520430	R	encoded by transcript ACA1_280650A; aldehyde dehydrogenase, mitochondrial, putative	complement(join(518236..518363,518453..518902,518982..519183,519271..519482,519565..519745,519791..520008,520033..520186,520270..520317,520419..520430))	Acanthamoeba castellanii str. Neff	14921886
ACA1_280660	CDS	ACA1_280660	NW_004457586.1	520668	521972	D	encoded by transcript ACA1_280660A; shortchain dehydrogenase/reductase SDR, putative	join(520668..520800,520884..520994,521078..521183,521267..521356,521435..521554,521631..521712,521793..521972)	Acanthamoeba castellanii str. Neff	14921887
ACA1_280670	CDS	ACA1_280670	NW_004457586.1	522128	522764	R	encoded by transcript ACA1_280670A; HMG (high mobility group) box domain containing protein	complement(join(522128..522327,522440..522764))	Acanthamoeba castellanii str. Neff	14921888
ACA1_280680	CDS	ACA1_280680	NW_004457586.1	523230	523916	R	encoded by transcript ACA1_280680A; antibiotic biosynthesis monooxygenase subfamily protein	complement(join(523230..523331,523411..523461,523529..523593,523661..523754,523872..523916))	Acanthamoeba castellanii str. Neff	14921889
ACA1_280690	CDS	ACA1_280690	NW_004457586.1	524843	526004	D	encoded by transcript ACA1_280690A; apurinic endonuclease (APN1) subfamily protein	join(524843..524903,524963..525103,525206..525252,525314..525410,525488..525576,525660..526004)	Acanthamoeba castellanii str. Neff	14921890
ACA1_280700	CDS	ACA1_280700	NW_004457586.1	526603	527193	D	encoded by transcript ACA1_280700A; uncharacterized protein	join(526603..526776,526881..526971,527066..527193)	Acanthamoeba castellanii str. Neff	14921891
ACA1_280710	CDS	ACA1_280710	NW_004457586.1	527358	530233	D	encoded by transcript ACA1_280710A; uncharacterized protein	join(527358..527405,527478..527676,527745..527852,527924..529297,529398..530233)	Acanthamoeba castellanii str. Neff	14921892
ACA1_280720	CDS	ACA1_280720	NW_004457586.1	530456	530783	D	encoded by transcript ACA1_280720A; calmodulin, putative	join(530456..530591,530719..>530783)	Acanthamoeba castellanii str. Neff	14921893
ACA1_280830	CDS	ACA1_280830	NW_004457586.1	531146	534210	D	encoded by transcript ACA1_280830A; Gpi16 subunit, GPI transamidase component protein	join(531146..531196,531227..531335,531411..531472,531503..531682,531935..532142,532178..532221,532285..532401,532478..532553,532663..532847,532926..532996,533085..533195,533292..533359,533432..533525,533634..533744,533837..533955,534044..534210)	Acanthamoeba castellanii str. Neff	14921894
ACA1_280840	CDS	ACA1_280840	NW_004457586.1	535518	539000	R	encoded by transcript ACA1_280840A; leucine rich repeat domain containing protein	complement(join(535518..535546,535631..535846,535933..536156,536234..536484,536563..536670,536840..536948,537098..537226,537376..537508,537619..537705,537793..537940,538038..538154,538254..538342,538488..538635,538719..538816,538904..539000))	Acanthamoeba castellanii str. Neff	14921895
ACA1_280850	CDS	ACA1_280850	NW_004457586.1	539103	540579	R	encoded by transcript ACA1_280850A; uncharacterized protein	complement(join(539103..539547,539741..539965,540034..540138,540212..540579))	Acanthamoeba castellanii str. Neff	14921896
ACA1_280960	CDS	ACA1_280960	NW_004457586.1	541529	542347	D	encoded by transcript ACA1_280960A; phosphatidylinositol glycan anchor biosynthesis, class T family protein	join(541529..541579,541610..541718,541794..541855,541886..542065,542192..542347)	Acanthamoeba castellanii str. Neff	14921897
ACA1_281070	CDS	ACA1_281070	NW_004457586.1	542751	547193	R	encoded by transcript ACA1_281070A; uncharacterized protein	complement(join(542751..542846,542939..544813,544881..545023,545092..545185,545244..545384,545455..545547,545624..545755,545814..545897,546205..546313,546422..546550,546633..546765,546872..546958,547067..547193))	Acanthamoeba castellanii str. Neff	14921898
ACA1_281180	CDS	ACA1_281180	NW_004457586.1	548108	549543	R	encoded by transcript ACA1_281180A; coenzyme Q9, putative	complement(join(548108..548188,548425..548580,548673..548777,548839..549003,549071..549160,549185..549218,549305..549543))	Acanthamoeba castellanii str. Neff	14921899
ACA1_281190	CDS	ACA1_281190	NW_004457586.1	549991	550971	D	encoded by transcript ACA1_281190A; uncharacterized protein	join(549991..550086,550159..550356,550439..550665,550737..550971)	Acanthamoeba castellanii str. Neff	14921900
ACA1_281200	CDS	ACA1_281200	NW_004457586.1	551062	560123	D	encoded by transcript ACA1_281200A; uncharacterized protein	join(551062..551211,551305..551372,551459..551589,551662..551787,551854..552014,552081..552214,552278..552575,552638..552746,552804..552934,553003..553200,553275..553418,553545..553808,553854..553967,554051..554188,554264..554437,554511..554774,554832..554897,554962..555099,555191..555329,555397..555568,555649..555782,555889..556100,556183..556294,556410..556494,556578..556668,556755..556835,556903..556988,557064..557242,557343..557467,557554..557619,557772..557848,557918..558032,558191..558892,558986..559122,559171..559537,559656..559784,559876..559947,560040..560123)	Acanthamoeba castellanii str. Neff	14921901
ACA1_281210	CDS	ACA1_281210	NW_004457586.1	560320	563452	R	encoded by transcript ACA1_281210A; chromo' (CHRromatin Organization MOdifier) domain containing protein	complement(join(560320..560740,560824..560917,561014..561260,561343..561591,561685..561841,561914..562215,562309..562517,562590..562664,562759..562886,562948..563027,563093..563452))	Acanthamoeba castellanii str. Neff	14921902
ACA1_281220	CDS	ACA1_281220	NW_004457586.1	564340	566092	D	encoded by transcript ACA1_281220A; uncharacterized protein	join(564340..564713,564800..564882,564984..565053,565092..565158,565234..565325,565391..565424,565561..565612,565741..565836,565904..566017,566091..566092)	Acanthamoeba castellanii str. Neff	14921903
ACA1_281230	CDS	ACA1_281230	NW_004457586.1	566614	567561	D	encoded by transcript ACA1_281230A; uncharacterized protein	566614..567561	Acanthamoeba castellanii str. Neff	14921904
ACA1_281240	CDS	ACA1_281240	NW_004457586.1	568258	570597	D	encoded by transcript ACA1_281240A; dual specificity protein kinase shka, putative	join(568258..568346,568417..568639,568698..568862,568943..569114,569219..569378,569470..569575,569654..569762,569844..569953,570037..570117,570227..570364,570472..570597)	Acanthamoeba castellanii str. Neff	14921905
ACA1_281250	CDS	ACA1_281250	NW_004457586.1	570930	573640	D	encoded by transcript ACA1_281250A; zinc finger, zz type domain containing protein	join(570930..570996,571103..571294,571407..571534,571623..571700,571822..571898,571964..572150,572290..572635,572716..572843,572953..573095,573238..573640)	Acanthamoeba castellanii str. Neff	14921906
ACA1_281260	CDS	ACA1_281260	NW_004457586.1	573692	577115	R	encoded by transcript ACA1_281260A; RhoGAP domain containing protein	complement(join(573692..574140,574277..574382,574543..574737,574823..574996,575073..575313,575415..575543,575662..575996,576081..576370,576454..576531,576625..576747,576899..577115))	Acanthamoeba castellanii str. Neff	14921907
ACA1_281270	CDS	ACA1_281270	NW_004457586.1	577150	578315	R	encoded by transcript ACA1_281270A; uncharacterized protein	complement(join(577150..577940,578093..578212,578291..578315))	Acanthamoeba castellanii str. Neff	14921908
ACA1_281280	CDS	ACA1_281280	NW_004457586.1	578455	579922	R	encoded by transcript ACA1_281280A; Hypothetical protein	complement(join(578455..578535,578639..578841,578974..579133,579213..579313,579394..579448,579522..579642,579810..579922))	Acanthamoeba castellanii str. Neff	14921909
ACA1_281290	CDS	ACA1_281290	NW_004457586.1	580249	581626	D	encoded by transcript ACA1_281290A; Leucinezipper-like transcriptional regulator 1 (LZTR-1), putative	join(580249..580441,580557..580715,580858..581052,581147..581320,581404..581564,581597..581626)	Acanthamoeba castellanii str. Neff	14921910
ACA1_281300	CDS	ACA1_281300	NW_004457586.1	581858	583820	D	encoded by transcript ACA1_281300A; Ras subfamily protein	join(581858..582165,582234..582397,582690..582764,582854..582903,582996..583046,583115..583181,583272..583340,583412..583594,583717..583820)	Acanthamoeba castellanii str. Neff	14921911
ACA1_281310	CDS	ACA1_281310	NW_004457586.1	583967	584770	R	encoded by transcript ACA1_281310A; uncharacterized protein	complement(583967..584770)	Acanthamoeba castellanii str. Neff	14921912
ACA1_281320	CDS	ACA1_281320	NW_004457586.1	584898	588820	R	encoded by transcript ACA1_281320A; Sel1 repeatcontaining protein	complement(join(584898..585084,585242..585394,585569..585738,585823..585919,586046..586233,586319..586374,586477..586623,586731..586804,586907..587004,587088..587240,587313..587385,587459..587634,587703..587957,588053..588513,588676..588820))	Acanthamoeba castellanii str. Neff	14921913
ACA1_281330	CDS	ACA1_281330	NW_004457586.1	589012	591757	R	encoded by transcript ACA1_281330A; protein kinase domain containing protein	complement(join(589012..589127,589218..589334,589406..589523,589596..589699,589768..589864,589953..590074,590148..590285,590364..590444,590525..590633,590719..590761,590840..590958,591046..591089,591160..591239,591317..591377,591462..591552,591650..591757))	Acanthamoeba castellanii str. Neff	14921914
ACA1_281340	CDS	ACA1_281340	NW_004457586.1	591888	593497	R	encoded by transcript ACA1_281340A; Ydr279p family (RNase H2 complex component) protein	complement(join(591888..591957,592047..592169,592382..592463,592546..592605,592809..592938,593028..593104,593187..593288,593344..593397,593461..593497))	Acanthamoeba castellanii str. Neff	14921915
ACA1_281350	CDS	ACA1_281350	NW_004457586.1	593520	593964	R	encoded by transcript ACA1_281350A; uncharacterized protein	complement(join(<593520..593655,593724..593786,593876..>593964))	Acanthamoeba castellanii str. Neff	14921916
ACA1_281460	CDS	ACA1_281460	NW_004457586.1	594233	595198	D	encoded by transcript ACA1_281460A; HAD hydrolase, family IA, variant 3 subfamily protein	join(594233..594243,594323..594453,594542..594623,594692..594747,594853..594972,595053..595198)	Acanthamoeba castellanii str. Neff	14921917
ACA1_281570	CDS	ACA1_281570	NW_004457586.1	597261	597760	R	encoded by transcript ACA1_281570A; membrane proteinlike, putative	complement(join(597261..597314,597382..597444,597533..597760))	Acanthamoeba castellanii str. Neff	14921918
ACA1_281580	CDS	ACA1_281580	NW_004457586.1	597892	598858	D	encoded by transcript ACA1_281580A; haloacid dehalogenaselike hydrolase domain containing protein	join(597892..598126,598210..598291,598362..598417,598514..598633,598713..598858)	Acanthamoeba castellanii str. Neff	14921919
ACA1_281590	CDS	ACA1_281590	NW_004457586.1	600079	601426	D	encoded by transcript ACA1_281590A; uncharacterized protein	join(600079..600402,600511..600690,600754..600822,600905..600990,601108..601426)	Acanthamoeba castellanii str. Neff	14921920
ACA1_281600	CDS	ACA1_281600	NW_004457586.1	601522	602920	R	encoded by transcript ACA1_281600A; PH domain containing protein	complement(join(601522..601736,601816..602388,602489..602574,602694..602742,602827..602920))	Acanthamoeba castellanii str. Neff	14921921
ACA1_281610	CDS	ACA1_281610	NW_004457586.1	603169	603622	D	encoded by transcript ACA1_281610A; uncharacterized protein	join(603169..603286,603317..603417,603515..603622)	Acanthamoeba castellanii str. Neff	14921922
ACA1_281820	CDS	ACA1_281820	NW_004457586.1	606547	608261	D	encoded by transcript ACA1_281820A; uncharacterized protein	join(606547..606554,606607..606700,606789..606943,606977..607084,607201..607310,607382..607444,607514..607600,607676..607769,607841..607920,608026..608132,608196..>608261)	Acanthamoeba castellanii str. Neff	14921923
ACA1_281930	CDS	ACA1_281930	NW_004457586.1	609797	610823	D	encoded by transcript ACA1_281930A; uncharacterized protein	join(609797..609985,610069..610093,610163..610473,610575..610823)	Acanthamoeba castellanii str. Neff	14921924
ACA1_281940	CDS	ACA1_281940	NW_004457586.1	611166	611930	R	encoded by transcript ACA1_281940A; uncharacterized protein	complement(join(611166..611426,611510..611630,611720..611777,611855..611930))	Acanthamoeba castellanii str. Neff	14921925
ACA1_281950	CDS	ACA1_281950	NW_004457586.1	612134	614787	R	encoded by transcript ACA1_281950A; helicase conserved Cterminal domain containing protein	complement(join(612134..612411,612487..612564,612639..612809,612886..613014,613080..613188,613254..613354,613467..613595,613680..613788,614042..614168,614280..614375,614452..614553,614654..614787))	Acanthamoeba castellanii str. Neff	14921926
ACA1_282060	CDS	ACA1_282060	NW_004457586.1	615603	616036	R	encoded by transcript ACA1_282060A; uncharacterized protein	complement(join(615603..615762,615858..616036))	Acanthamoeba castellanii str. Neff	14921927
ACA1_282170	CDS	ACA1_282170	NW_004457586.1	616210	617082	R	encoded by transcript ACA1_282170A; DEAD/DEAH box helicase domain containing protein	complement(join(616210..616322,616412..616590,616646..616793,616859..616978,616992..>617082))	Acanthamoeba castellanii str. Neff	14921928
ACA1_282180	CDS	ACA1_282180	NW_004457586.1	617499	621395	D	encoded by transcript ACA1_282180A; Bbox zinc finger domain containing protein	join(617499..617636,617694..617769,617837..617952,618032..618158,618236..618372,618439..618541,618629..618726,618794..619072,619148..619376,619464..619719,619801..619891,619976..620081,620150..620316,620470..620710,620783..620902,620977..621061,621140..621395)	Acanthamoeba castellanii str. Neff	14921929
ACA1_282190	CDS	ACA1_282190	NW_004457586.1	621667	623734	R	encoded by transcript ACA1_282190A; Synapsin, ATP binding domain containing protein	complement(join(621667..621758,621858..621905,621978..622053,622130..622267,622357..622504,622576..622680,622784..622904,623032..623109,623223..623299,623415..623499,623587..623734))	Acanthamoeba castellanii str. Neff	14921930
ACA1_282200	CDS	ACA1_282200	NW_004457586.1	623903	625646	D	encoded by transcript ACA1_282200A; NAD dependent epimerase/dehydratase superfamily protein	join(623903..624032,624105..624188,624244..624315,624737..624820,624868..624942,625011..625045,625141..625267,625324..625415,625491..625646)	Acanthamoeba castellanii str. Neff	14921931
ACA1_282210	CDS	ACA1_282210	NW_004457586.1	625819	628544	D	encoded by transcript ACA1_282210A; betacarotene 15,15'-monooxygenase 1, putative	join(625819..626109,626261..626407,626499..626593,626672..626743,626811..626878,626977..627137,627238..627390,627482..627570,627639..627739,627808..628219,628287..628399,628477..628544)	Acanthamoeba castellanii str. Neff	14921932
ACA1_282220	CDS	ACA1_282220	NW_004457586.1	628777	631950	D	encoded by transcript ACA1_282220A; torulene oxygenase	join(628777..629019,629144..629290,629385..629479,629559..629627,629724..629791,629954..630114,630220..630372,630470..630558,630633..630733,630813..631230,631339..631451,631814..631950)	Acanthamoeba castellanii str. Neff	14921933
ACA1_282230	CDS	ACA1_282230	NW_004457586.1	631688	632455	R	encoded by transcript ACA1_282230A; LIM domain containing protein	complement(join(631688..631763,631861..631981,632099..632254,632317..632455))	Acanthamoeba castellanii str. Neff	14921934
ACA1_282240	CDS	ACA1_282240	NW_004457586.1	632612	637750	R	encoded by transcript ACA1_282240A; uncharacterized protein	complement(join(632612..632761,632840..632945,633097..633131,633237..633335,633443..633546,633690..633796,633921..635139,635279..635420,635504..635869,635976..636098,636167..636231,636301..636429,636520..637750))	Acanthamoeba castellanii str. Neff	14921935
ACA1_282250	CDS	ACA1_282250	NW_004457586.1	638687	639067	D	encoded by transcript ACA1_282250A; antibiotic biosynthesis monooxygenase	638687..639067	Acanthamoeba castellanii str. Neff	14921936
ACA1_282260	CDS	ACA1_282260	NW_004457586.1	639488	640860	R	encoded by transcript ACA1_282260A; R3H domain containing protein	complement(join(639488..639561,639649..639784,639866..639964,640044..640135,640197..640288,640380..640501,640581..640780,640818..640860))	Acanthamoeba castellanii str. Neff	14921937
ACA1_282270	CDS	ACA1_282270	NW_004457586.1	641071	643458	R	encoded by transcript ACA1_282270A; uncharacterized protein	complement(join(641071..641093,641232..641318,641383..641701,641775..641917,642000..643458))	Acanthamoeba castellanii str. Neff	14921938
ACA1_282280	CDS	ACA1_282280	NW_004457586.1	643785	644529	D	encoded by transcript ACA1_282280A; dihydrofolate reductase	join(643785..644015,644072..644186,644244..644323,644398..644529)	Acanthamoeba castellanii str. Neff	14921939
ACA1_282290	CDS	ACA1_282290	NW_004457586.1	644838	645150	D	encoded by transcript ACA1_282290A; uncharacterized protein	join(<644838..644883,644939..645150)	Acanthamoeba castellanii str. Neff	14921940
ACA1_282300	CDS	ACA1_282300	NW_004457586.1	645483	646185	D	encoded by transcript ACA1_282300A; uncharacterized protein	join(645483..645602,645685..645733,645820..645979,646062..646185)	Acanthamoeba castellanii str. Neff	14921941
ACA1_282310	CDS	ACA1_282310	NW_004457586.1	646427	649548	D	encoded by transcript ACA1_282310A; mitogen-activated protein kinase kinase kinase	join(646427..646555,646637..646697,646797..646923,647002..647071,647205..647261,647329..647409,647544..647669,647779..647965,648048..648376,648446..648498,648663..648704,648813..649115,649182..649548)	Acanthamoeba castellanii str. Neff	14921942
ACA1_282330	CDS	ACA1_282330	NW_004457586.1	652543	653581	D	encoded by transcript ACA1_282330A; Rac1 protein	join(652543..652645,652735..652856,652929..653012,653075..653163,653232..653367,653429..653581)	Acanthamoeba castellanii str. Neff	14921944
ACA1_282340	CDS	ACA1_282340	NW_004457586.1	653677	655940	R	encoded by transcript ACA1_282340A; uncharacterized protein	complement(join(653677..654705,654810..655530,655606..655719,655879..655940))	Acanthamoeba castellanii str. Neff	14921945
ACA1_282350	CDS	ACA1_282350	NW_004457586.1	656610	661155	R	encoded by transcript ACA1_282350A; ATPdependent DNA helicase, RecQ subfamily protein	complement(join(656610..656747,656902..657089,657180..657299,657386..657497,657583..657697,657764..657881,657967..658242,658442..658561,658673..658808,658889..659077,659420..659488,659580..660034,660123..660238,660329..660454,660515..660603,660679..660870,660955..661155))	Acanthamoeba castellanii str. Neff	14921946
ACA1_282360	CDS	ACA1_282360	NW_004457586.1	661661	662969	R	encoded by transcript ACA1_282360A; uncharacterized protein	complement(join(661661..661898,661983..662074,662165..662236,662312..662493,662538..662645,662710..662761,662826..662969))	Acanthamoeba castellanii str. Neff	14921947
ACA1_282370	CDS	ACA1_282370	NW_004457586.1	663240	664275	D	encoded by transcript ACA1_282370A; cholestenol delta-isomerase	join(663240..663436,663528..663587,663680..663812,663892..663999,664090..664275)	Acanthamoeba castellanii str. Neff	14921948
ACA1_282380	CDS	ACA1_282380	NW_004457586.1	664432	666625	R	encoded by transcript ACA1_282380A; UNC93 family protein	complement(join(664432..664808,664927..665740,665821..665989,666101..666196,666273..666374,666492..666625))	Acanthamoeba castellanii str. Neff	14921949
ACA1_282390	CDS	ACA1_282390	NW_004457586.1	666951	671752	R	encoded by transcript ACA1_282390A; SNF2 family Nterminal domain containing protein	complement(join(666951..667110,667211..667442,667518..667649,667671..667696,667781..667883,668000..668186,668263..668393,668447..668615,668715..668730,668748..669055,669159..669275,669344..669755,669849..670005,670052..670270,670326..670426,670532..670638,670726..670868,670938..671041,671295..671553,671644..671752))	Acanthamoeba castellanii str. Neff	14921950
ACA1_282400	CDS	ACA1_282400	NW_004457586.1	672811	676397	D	encoded by transcript ACA1_282400A; ABC transporter, ATPbinding domain containing protein	join(672811..672937,673135..673304,673405..673458,673572..673759,673871..673973,674041..674152,674239..674340,674458..674564,674660..674802,674889..674958,675047..675281,675388..675514,675601..675727,675802..675879,675965..676116,676220..676397)	Acanthamoeba castellanii str. Neff	14921951
ACA1_282410	CDS	ACA1_282410	NW_004457586.1	676589	677372	D	encoded by transcript ACA1_282410A; uncharacterized protein	join(676589..676885,677007..677372)	Acanthamoeba castellanii str. Neff	14921952
ACA1_282420	CDS	ACA1_282420	NW_004457586.1	677460	678233	D	encoded by transcript ACA1_282420A; uncharacterized protein	join(677460..677577,677688..677933,678001..678233)	Acanthamoeba castellanii str. Neff	14921953
ACA1_282430	CDS	ACA1_282430	NW_004457586.1	679276	680216	R	encoded by transcript ACA1_282430A; DHFRcoamplified protein	complement(join(679276..679649,679802..679859,679875..680216))	Acanthamoeba castellanii str. Neff	14921954
ACA1_282440	CDS	ACA1_282440	NW_004457586.1	680333	681696	D	encoded by transcript ACA1_282440A; uncharacterized protein	join(680333..680488,680557..680643,680742..680878,680961..681064,681136..681213,681312..681534,681600..681696)	Acanthamoeba castellanii str. Neff	14921955
ACA1_282450	CDS	ACA1_282450	NW_004457586.1	681840	682547	R	encoded by transcript ACA1_282450A; uncharacterized protein	complement(join(681840..682112,682254..682547))	Acanthamoeba castellanii str. Neff	14921956
ACA1_282460	CDS	ACA1_282460	NW_004457586.1	683181	686234	D	encoded by transcript ACA1_282460A; SPRY domain containing protein	join(683181..683325,683538..683589,683745..683765,683837..683931,684030..684242,684416..684684,684810..684838,684965..685097,685199..685428,685620..685846,685927..686234)	Acanthamoeba castellanii str. Neff	14921957
ACA1_282470	CDS	ACA1_282470	NW_004457586.1	687520	689620	R	encoded by transcript ACA1_282470A; BTB/POZ domain containing protein	complement(join(687520..687582,687685..687822,687974..688049,688135..688229,688352..688594,688697..689620))	Acanthamoeba castellanii str. Neff	14921958
ACA1_282480	CDS	ACA1_282480	NW_004457586.1	690222	693604	D	encoded by transcript ACA1_282480A; uncharacterized protein	join(690222..690254,690564..690668,690751..690803,690941..690979,691086..691185,691290..691385,691512..693008,693123..693410,693494..693604)	Acanthamoeba castellanii str. Neff	14921959
ACA1_282500	CDS	ACA1_282500	NW_004457586.1	694792	696279	R	encoded by transcript ACA1_282500A; ankyrin repeat-containing protein	complement(join(694792..694970,695051..695159,695275..695303,695487..695609,695699..695788,695892..696279))	Acanthamoeba castellanii str. Neff	14921961
ACA1_282510	CDS	ACA1_282510	NW_004457586.1	696352	697536	D	encoded by transcript ACA1_282510A; uncharacterized protein	join(696352..696358,696417..696594,696663..696792,696877..697014,697085..697219,697303..697536)	Acanthamoeba castellanii str. Neff	14921962
ACA1_282520	CDS	ACA1_282520	NW_004457586.1	697637	699029	D	encoded by transcript ACA1_282520A; uncharacterized protein	join(697637..697662,697728..697808,697874..697995,698073..698173,698245..698313,698397..698615,698689..698755,698830..699029)	Acanthamoeba castellanii str. Neff	14921963
ACA1_282530	CDS	ACA1_282530	NW_004457586.1	699112	705532	D	encoded by transcript ACA1_282530A; Fanconi anemia, complementation group I, putative	join(699112..699140,699208..699357,699435..699537,699603..699743,699784..699892,699967..700195,700267..700363,700439..700621,700693..700763,700823..700914,700991..701099,701173..701320,701398..701485,701557..701642,701724..701825,701912..701995,702087..702344,702428..702506,702588..702676,702754..702843,702943..702999,703079..703144,703214..703477,703595..703726,703818..703883,703976..704105,704210..704322,704421..704537,704634..704757,704847..704944,705027..705088,705197..705269,705362..705532)	Acanthamoeba castellanii str. Neff	14921964
ACA1_282540	CDS	ACA1_282540	NW_004457586.1	705598	706874	R	encoded by transcript ACA1_282540A; ribonuclease HII, putative	complement(join(705598..705760,705856..706070,706158..706383,706452..706575,706666..706740,706799..706874))	Acanthamoeba castellanii str. Neff	14921965
ACA1_282550	CDS	ACA1_282550	NW_004457586.1	707158	708234	D	encoded by transcript ACA1_282550A; Hypothetical protein	join(707158..707489,707589..708234)	Acanthamoeba castellanii str. Neff	14921966
ACA1_282660	CDS	ACA1_282660	NW_004457586.1	711676	714616	D	encoded by transcript ACA1_282660A; uncharacterized protein	join(711676..711733,711858..711893,711955..712051,712146..712437,712550..712924,713002..713126,713198..713303,713334..713506,713578..713713,713794..714095,714176..714240,714330..714616)	Acanthamoeba castellanii str. Neff	14921967
ACA1_282670	CDS	ACA1_282670	NW_004457586.1	715140	716801	D	encoded by transcript ACA1_282670A; leucine rich repeat domain containing protein	join(715140..715406,715529..715691,715755..715859,715930..716060,716142..716320,716399..716801)	Acanthamoeba castellanii str. Neff	14921968
ACA1_282680	CDS	ACA1_282680	NW_004457586.1	717205	717786	D	encoded by transcript ACA1_282680A; uncharacterized protein	join(717205..717417,717509..717626,717752..717786)	Acanthamoeba castellanii str. Neff	14921969
ACA1_282690	CDS	ACA1_282690	NW_004457586.1	718140	718949	D	encoded by transcript ACA1_282690A; uncharacterized protein	join(718140..718589,718604..718631,718744..718949)	Acanthamoeba castellanii str. Neff	14921970
ACA1_282700	CDS	ACA1_282700	NW_004457586.1	719108	719871	D	encoded by transcript ACA1_282700A; EF hand domain containing protein	join(719108..719212,719287..719351,719453..719549,719701..719871)	Acanthamoeba castellanii str. Neff	14921971
ACA1_282710	CDS	ACA1_282710	NW_004457586.1	720156	724205	D	encoded by transcript ACA1_282710A; cyclic nucleotide-binding domain containing protein	join(720156..720326,720443..720590,720710..720826,720912..721045,721147..721287,721374..721447,721523..721623,721702..721877,721899..722246,722381..722445,722535..722652,722719..722808,722847..723308,723375..723597,723689..723836,723914..724205)	Acanthamoeba castellanii str. Neff	14921972
ACA1_282720	CDS	ACA1_282720	NW_004457586.1	724290	725601	R	encoded by transcript ACA1_282720A; leucine rich repeat domain containing protein	complement(join(724290..724464,724532..724598,724667..724864,724933..725037,725110..725326,725403..725452,725541..725601))	Acanthamoeba castellanii str. Neff	14921973
ACA1_282730	CDS	ACA1_282730	NW_004457586.1	725821	727355	D	encoded by transcript ACA1_282730A; NLI interacting factor family phosphatase	join(725821..725829,726088..726190,726279..726310,726395..726676,726738..726872,726945..727065,727150..727355)	Acanthamoeba castellanii str. Neff	14921974
ACA1_282740	CDS	ACA1_282740	NW_004457586.1	727493	728771	D	encoded by transcript ACA1_282740A; ferredoxin, putative	join(727493..727535,727599..727928,728001..728041,728125..728247,728325..728433,728515..728639,728703..728771)	Acanthamoeba castellanii str. Neff	14921975
ACA1_282850	CDS	ACA1_282850	NW_004457586.1	731221	735939	R	encoded by transcript ACA1_282850A; isoleucyl-tRNA synthetase	complement(join(731221..731295,731501..731791,731983..732074,732319..732436,732507..732735,732929..733026,733218..733475,733548..733776,733962..734217,734238..734275,734477..734612,734677..734805,735057..735141,735202..735467,735676..735846,735930..735939))	Acanthamoeba castellanii str. Neff	14921976
ACA1_282860	CDS	ACA1_282860	NW_004457586.1	736834	739159	R	encoded by transcript ACA1_282860A; 3beta hydroxysteroid dehydrogenase/isomerase family protein	complement(join(736834..737017,737088..737195,737282..737427,737587..737613,737945..738028,738114..738215,738302..738419,738507..738611,738693..738811,738917..739012,739082..>739159))	Acanthamoeba castellanii str. Neff	14921977
ACA1_282870	CDS	ACA1_282870	NW_004457586.1	739314	739935	D	encoded by transcript ACA1_282870A; uncharacterized protein	join(739314..739692,739778..739935)	Acanthamoeba castellanii str. Neff	14921978
ACA1_282880	CDS	ACA1_282880	NW_004457586.1	740294	741409	D	encoded by transcript ACA1_282880A; flagellar associated protein	join(740294..740346,740424..740461,740524..740675,740769..740849,740947..741079,741176..741287,741391..741409)	Acanthamoeba castellanii str. Neff	14921979
ACA1_282890	CDS	ACA1_282890	NW_004457586.1	741726	743538	D	encoded by transcript ACA1_282890A; arginine nmethyltransferase, putative	join(741726..741834,741902..742068,742155..742218,742290..742371,742445..742511,742600..742803,743077..743351,743448..743538)	Acanthamoeba castellanii str. Neff	14921980
ACA1_282900	CDS	ACA1_282900	NW_004457586.1	743842	744279	R	encoded by transcript ACA1_282900A; uncharacterized protein	complement(join(743842..744152,744261..744279))	Acanthamoeba castellanii str. Neff	14921981
ACA1_282910	CDS	ACA1_282910	NW_004457586.1	744668	745309	D	encoded by transcript ACA1_282910A; uncharacterized protein	join(744668..744955,745037..745309)	Acanthamoeba castellanii str. Neff	14921982
ACA1_282920	CDS	ACA1_282920	NW_004457586.1	745443	747741	R	encoded by transcript ACA1_282920A; erythromycin esterase	complement(join(745443..745806,745899..745989,746064..746193,746294..746443,746544..746642,746719..746838,746919..747044,747152..747170,747251..747328,747404..747537,747607..747741))	Acanthamoeba castellanii str. Neff	14921983
ACA1_282930	CDS	ACA1_282930	NW_004457586.1	748219	750086	R	encoded by transcript ACA1_282930A; aminotransferase, classes I and II, putative	complement(join(748219..748358,748437..748596,748665..748876,748970..749077,749211..749361,749422..749553,749655..749831,749955..750012,750046..750086))	Acanthamoeba castellanii str. Neff	14921984
ACA1_282940	CDS	ACA1_282940	NW_004457586.1	750521	752760	R	encoded by transcript ACA1_282940A; uncharacterized protein	complement(join(750521..750755,750861..750894,750998..751103,751182..751334,751408..751520,751626..751720,751790..751913,752007..752201,752286..752372,752455..752564,752639..752760))	Acanthamoeba castellanii str. Neff	14921985
ACA1_282950	CDS	ACA1_282950	NW_004457586.1	752965	753240	D	encoded by transcript ACA1_282950A; uncharacterized protein	752965..753240	Acanthamoeba castellanii str. Neff	14921986
ACA1_282960	CDS	ACA1_282960	NW_004457586.1	753315	755875	R	encoded by transcript ACA1_282960A; peptidylprolyl cis-trans isomerase, cyclophilin-type domain containing protein	complement(join(753315..753966,754056..754171,754256..754352,754418..754623,754754..754912,754998..755120,755206..755326,755673..755875))	Acanthamoeba castellanii str. Neff	14921987
ACA1_282970	CDS	ACA1_282970	NW_004457586.1	755991	757273	D	encoded by transcript ACA1_282970A; dephosphoCoA kinase	join(755991..756039,756101..756337,756416..756532,756955..757043,757115..757273)	Acanthamoeba castellanii str. Neff	14921988
ACA1_282980	CDS	ACA1_282980	NW_004457586.1	757365	758282	R	encoded by transcript ACA1_282980A; uncharacterized protein	complement(join(757365..757507,757595..757726,757796..757935,758002..758282))	Acanthamoeba castellanii str. Neff	14921989
ACA1_282990	CDS	ACA1_282990	NW_004457586.1	758514	759657	D	encoded by transcript ACA1_282990A; uncharacterized protein	join(758514..758628,758700..758807,758866..759084,759143..759210,759280..759373,759442..759476,759550..759657)	Acanthamoeba castellanii str. Neff	14921990
ACA1_283000	CDS	ACA1_283000	NW_004457586.1	760288	763361	D	encoded by transcript ACA1_283000A; Leucine-rich protein	join(760288..760341,760371..760442,760512..760580,760650..760721,760923..760991,761056..761127,761190..761261,761335..761409,761480..761548,761621..761692,761755..761826,761903..761974,762045..762116,762187..762261,762296..762391,762480..762537,762624..762923,762943..763361)	Acanthamoeba castellanii str. Neff	14921991
ACA1_283010	CDS	ACA1_283010	NW_004457586.1	763518	764119	R	encoded by transcript ACA1_283010A; uncharacterized protein	complement(join(763518..763677,763755..764119))	Acanthamoeba castellanii str. Neff	14921992
ACA1_283030	CDS	ACA1_283030	NW_004457586.1	769196	771981	D	encoded by transcript ACA1_283030A; Rattus norvegicus clone C53 CDK5 activator-binding family protein	join(769196..769292,769402..769584,769693..769891,770017..770296,770414..770511,770596..770776,770885..770996,771058..771245,771414..771619,771732..771981)	Acanthamoeba castellanii str. Neff	14921994
ACA1_283040	CDS	ACA1_283040	NW_004457586.1	772069	773276	R	encoded by transcript ACA1_283040A; Bacterial protein of unknown function (DUF924)	complement(join(772069..772078,772191..772264,772372..772518,772605..772629,772649..772694,772759..772774,772842..772938,773002..773049,773152..773276))	Acanthamoeba castellanii str. Neff	14921995
ACA1_283050	CDS	ACA1_283050	NW_004457586.1	773569	774200	D	encoded by transcript ACA1_283050A; eukaryotic translation initiation factor 4e1a-binding protein	join(773569..773683,773816..773943,774024..774069,774175..774200)	Acanthamoeba castellanii str. Neff	14921996
ACA1_283060	CDS	ACA1_283060	NW_004457586.1	774493	775054	D	encoded by transcript ACA1_283060A; BolA like protein	join(774493..774543,774589..774637,774697..774800,774860..774905,774978..775054)	Acanthamoeba castellanii str. Neff	14921997
ACA1_283070	CDS	ACA1_283070	NW_004457586.1	775250	776260	R	encoded by transcript ACA1_283070A; uncharacterized protein	complement(join(775250..775641,775717..776260))	Acanthamoeba castellanii str. Neff	14921998
ACA1_283080	CDS	ACA1_283080	NW_004457586.1	776490	783331	R	encoded by transcript ACA1_283080A; anaphase promoting complex subunit 1, putative	complement(join(776490..776941,777698..777722,777783..777887,777981..778115,778234..778405,778502..778855,778930..779066,779164..779454,779533..779763,779849..779989,780059..780265,780340..780692,780770..780883,780958..781338,781414..781569,781634..781835,781929..781999,782101..783331))	Acanthamoeba castellanii str. Neff	14921999
ACA1_283190	CDS	ACA1_283190	NW_004457586.1	783503	785753	D	encoded by transcript ACA1_283190A; uncharacterized protein	join(783503..783803,783870..784040,784114..784308,784471..784563,784643..784764,784828..785118,785162..785274,785348..785753)	Acanthamoeba castellanii str. Neff	14922000
ACA1_283200	CDS	ACA1_283200	NW_004457586.1	786306	787022	D	encoded by transcript ACA1_283200A; uncharacterized protein	join(786306..786636,786721..787022)	Acanthamoeba castellanii str. Neff	14922001
ACA1_283210	CDS	ACA1_283210	NW_004457586.1	787136	790116	R	encoded by transcript ACA1_283210A; leucine rich repeat domain containing protein	complement(join(787136..787235,787356..787671,787780..787983,788114..788183,788274..788325,788449..788531,788642..788874,789059..789347,789512..789801,789988..790012,790081..790116))	Acanthamoeba castellanii str. Neff	14922002
ACA1_283220	CDS	ACA1_283220	NW_004457586.1	790398	793345	D	encoded by transcript ACA1_283220A; calponin domain containing protein	join(790398..790496,790717..790794,790915..791022,791151..791282,791387..791520,791599..791674,791745..791864,791959..792215,792331..792498,792643..792805,792947..793345)	Acanthamoeba castellanii str. Neff	14922003
ACA1_283230	CDS	ACA1_283230	NW_004457586.1	793843	798217	D	encoded by transcript ACA1_283230A; oxoglutarate dehydrogenase (succinyltransferring), E1 component, putative	join(793843..794147,794313..794653,794763..794854,794970..795092,795280..795490,795579..795910,796041..796142,796256..796384,796493..796613,796710..796846,796993..797035,797127..797341,797441..797697,797800..798022,798116..798217)	Acanthamoeba castellanii str. Neff	14922004
ACA1_283240	CDS	ACA1_283240	NW_004457586.1	799621	800325	D	encoded by transcript ACA1_283240A; uncharacterized protein	join(799621..799966,800048..800325)	Acanthamoeba castellanii str. Neff	14922005
ACA1_283250	CDS	ACA1_283250	NW_004457586.1	800545	803475	R	encoded by transcript ACA1_283250A; protein kinase domain containing protein	complement(join(800545..801029,801100..801324,801410..801525,801582..801711,801803..801963,802047..802163,802238..802298,802363..802508,802579..802640,802708..802835,802907..803042,803099..803333,803396..>803475))	Acanthamoeba castellanii str. Neff	14922006
ACA1_283260	CDS	ACA1_283260	NW_004457586.1	804886	806501	D	encoded by transcript ACA1_283260A; regulator of g protein signaling domain containing protein	join(804886..805348,805480..805728,805838..806088,806199..806501)	Acanthamoeba castellanii str. Neff	14922007
ACA1_283270	CDS	ACA1_283270	NW_004457586.1	806819	807669	R	encoded by transcript ACA1_283270A; uncharacterized protein	complement(join(806819..807188,807280..807477,807554..807669))	Acanthamoeba castellanii str. Neff	14922008
ACA1_283280	CDS	ACA1_283280	NW_004457586.1	807844	808622	D	encoded by transcript ACA1_283280A; hydrolase, NUDIX domain containing protein	join(807844..807963,808049..808176,808278..808380,808512..808622)	Acanthamoeba castellanii str. Neff	14922009
ACA1_283290	CDS	ACA1_283290	NW_004457586.1	808763	809761	R	encoded by transcript ACA1_283290A; RhoGAP domain containing protein	complement(join(808763..808972,809065..809224,809320..809397,809491..809593,809692..809761))	Acanthamoeba castellanii str. Neff	14922010
ACA1_283300	CDS	ACA1_283300	NW_004457586.1	809846	813260	R	encoded by transcript ACA1_283300A; domain found in dishevelled, egl10, and pleckstrin domain containing protein	complement(join(809846..810166,810270..810562,810647..810856,810965..811096,811186..811361,811450..811591,811671..811843,811962..812094,812206..812302,812415..812571,812649..812705,812828..812966,813215..813260))	Acanthamoeba castellanii str. Neff	14922011
ACA1_283310	CDS	ACA1_283310	NW_004457586.1	813670	816423	R	encoded by transcript ACA1_283310A; SAM domain (Sterile alpha motif) domain containing protein	complement(join(813670..813872,813994..814168,814263..814379,814464..814527,814650..814795,814865..816288,816318..816423))	Acanthamoeba castellanii str. Neff	14922012
ACA1_283320	CDS	ACA1_283320	NW_004457586.1	816740	818542	D	encoded by transcript ACA1_283320A; PSP, prolinerich, putative	816740..818542	Acanthamoeba castellanii str. Neff	14922013
ACA1_283430	CDS	ACA1_283430	NW_004457586.1	818792	819754	R	encoded by transcript ACA1_283430A; Yip1 domain containing protein	complement(join(818792..819149,819273..819754))	Acanthamoeba castellanii str. Neff	14922014
ACA1_283440	CDS	ACA1_283440	NW_004457586.1	819861	823395	D	encoded by transcript ACA1_283440A; WD repeat protein	join(819861..819872,820129..820299,820415..820559,820653..820777,820989..821140,821255..821315,821486..821547,821680..821808,821908..822049,822181..822273,822382..822621,822687..822773,822878..822979,823118..823233,823326..823395)	Acanthamoeba castellanii str. Neff	14922015
ACA1_283450	CDS	ACA1_283450	NW_004457586.1	823524	825949	R	encoded by transcript ACA1_283450A; Pectinacetylesterase	complement(join(823524..823624,823715..823809,823878..823934,824007..824107,824162..824281,824404..824529,824676..824785,824921..825023,825199..825283,825376..825541,825634..825726,825823..825949))	Acanthamoeba castellanii str. Neff	14922016
ACA1_283460	CDS	ACA1_283460	NW_004457586.1	826135	827573	R	encoded by transcript ACA1_283460A; leucine rich repeat domain containing protein	complement(join(826135..826228,826325..826568,826670..826813,826925..827031,827144..827229,827378..827423,827458..827573))	Acanthamoeba castellanii str. Neff	14922017
ACA1_283470	CDS	ACA1_283470	NW_004457586.1	828053	836246	D	encoded by transcript ACA1_283470A; BTB/POZ domain containing protein	join(828053..828110,828250..828321,828431..828522,828639..828729,828797..829165,829269..829301,829399..829521,829598..829669,829801..829943,830053..830197,830274..830420,830536..830596,830765..830852,830936..831025,831103..831204,831282..831425,831504..831651,831727..831870,831959..832113,832188..832293,832353..832951,833043..833120,833255..833359,833444..833737,833816..833902,834020..834307,834460..834544,834662..835387,835420..835542,835559..836061,836133..836246)	Acanthamoeba castellanii str. Neff	14922018
ACA1_283480	CDS	ACA1_283480	NW_004457586.1	836590	837023	D	encoded by transcript ACA1_283480A; LIM domain containing protein	join(836590..836680,836752..836866,836933..837023)	Acanthamoeba castellanii str. Neff	14922019
ACA1_283490	CDS	ACA1_283490	NW_004457586.1	837319	838962	D	encoded by transcript ACA1_283490A; uncharacterized protein	join(837319..837514,837582..837691,837754..838142,838233..838357,838436..838511,838573..838644,838697..838734,838823..838962)	Acanthamoeba castellanii str. Neff	14922020
ACA1_283500	CDS	ACA1_283500	NW_004457586.1	840374	842136	R	encoded by transcript ACA1_283500A; chorismate synthase	complement(join(840374..840601,840668..840988,841112..841258,841362..841631,841797..841888,842061..842136))	Acanthamoeba castellanii str. Neff	14922021
ACA1_283510	CDS	ACA1_283510	NW_004457586.1	842422	846224	D	encoded by transcript ACA1_283510A; indole3-glycerol phosphate synthase	join(842422..842454,842608..842812,842940..843026,843152..843301,843408..843651,843729..844044,844123..844245,844344..844451,844531..844648,844788..844912,845016..845106,845225..845593,845671..845987,846024..846224)	Acanthamoeba castellanii str. Neff	14922022
ACA1_283520	CDS	ACA1_283520	NW_004457586.1	846640	850075	R	encoded by transcript ACA1_283520A; Mitogenactivated protein kinase 5, putative	complement(join(846640..847014,847138..847245,847361..847580,847672..847765,847859..847925,848007..848116,848183..848261,848390..848469,848564..848635,848750..848879,849024..849065,849153..849245,849447..849506,849667..849814,849909..850075))	Acanthamoeba castellanii str. Neff	14922023
ACA1_283530	CDS	ACA1_283530	NW_004457586.1	850174	853618	R	encoded by transcript ACA1_283530A; anthranilate phosphoribosyltransferase	complement(join(850174..850352,850442..850649,850724..850933,851015..851143,851250..851404,851478..851605,851692..851771,851870..852018,852100..852195,852317..852478,852582..852851,852965..853096,853204..853284,853379..853493,853592..853618))	Acanthamoeba castellanii str. Neff	14922024
ACA1_283540	CDS	ACA1_283540	NW_004457586.1	853828	854608	D	encoded by transcript ACA1_283540A; uncharacterized protein	join(<853828..853969,854058..854212,854297..854608)	Acanthamoeba castellanii str. Neff	14922025
ACA1_283550	CDS	ACA1_283550	NW_004457586.1	854746	856445	R	encoded by transcript ACA1_283550A; anthranilate synthase component I family protein	complement(join(<854746..854888,855015..855229,855320..855510,855622..855753,855861..856282,856436..856445))	Acanthamoeba castellanii str. Neff	14922026
ACA1_283560	CDS	ACA1_283560	NW_004457586.1	856691	859789	D	encoded by transcript ACA1_283560A; tryptophan synthase alpha chain, putative	join(856691..856901,857225..857380,857456..857534,857637..857789,857915..858289,858362..858534,858607..858833,859014..859227,859317..859789)	Acanthamoeba castellanii str. Neff	14922027
ACA1_283570	CDS	ACA1_283570	NW_004457586.1	860881	861654	R	encoded by transcript ACA1_283570A; methyltransferase type 11, putative	complement(join(860881..861244,861305..861654))	Acanthamoeba castellanii str. Neff	14922028
ACA1_283580	CDS	ACA1_283580	NW_004457586.1	864724	865364	R	encoded by transcript ACA1_283580A; Hypothetical protein	complement(join(864724..865314,865353..865364))	Acanthamoeba castellanii str. Neff	14922029
ACA1_283590	CDS	ACA1_283590	NW_004457586.1	866368	869860	R	encoded by transcript ACA1_283590A; uncharacterized protein	complement(join(866368..866571,866683..866764,866844..866914,867028..867116,867262..867417,867497..867719,867865..867987,868072..868175,868291..868360,868470..868894,868988..869754,869847..869860))	Acanthamoeba castellanii str. Neff	14922030
ACA1_283710	CDS	ACA1_283710	NW_004457586.1	877418	878340	R	encoded by transcript ACA1_283710A; LIM domain containing protein	complement(join(877418..877476,877580..877988,878090..878194,878323..878340))	Acanthamoeba castellanii str. Neff	14922032
ACA1_283720	CDS	ACA1_283720	NW_004457586.1	878695	880162	R	encoded by transcript ACA1_283720A; uncharacterized protein	complement(join(878695..878739,878999..879111,879238..879463,879545..879765,879842..879906,879938..879950,880015..880162))	Acanthamoeba castellanii str. Neff	14922033
ACA1_283930	CDS	ACA1_283930	NW_004457586.1	880909	882229	R	encoded by transcript ACA1_283930A; YEATS family protein	complement(join(880909..881482,881569..881816,881827..881857,881973..882229))	Acanthamoeba castellanii str. Neff	14922034
ACA1_283940	CDS	ACA1_283940	NW_004457586.1	883063	883500	D	encoded by transcript ACA1_283940A; uncharacterized protein	883063..883500	Acanthamoeba castellanii str. Neff	14922035
ACA1_283950	CDS	ACA1_283950	NW_004457586.1	883963	884210	D	encoded by transcript ACA1_283950A; uncharacterized protein	join(883963..884010,884034..884210)	Acanthamoeba castellanii str. Neff	14922036
ACA1_283960	CDS	ACA1_283960	NW_004457586.1	884349	884744	R	encoded by transcript ACA1_283960A; uncharacterized protein	complement(join(884349..884502,884611..884744))	Acanthamoeba castellanii str. Neff	14922037
ACA1_283970	CDS	ACA1_283970	NW_004457586.1	885015	885917	R	encoded by transcript ACA1_283970A; uncharacterized protein	complement(join(885015..885465,885490..885917))	Acanthamoeba castellanii str. Neff	14922038
ACA1_283980	CDS	ACA1_283980	NW_004457586.1	886093	886426	R	encoded by transcript ACA1_283980A; uncharacterized protein	complement(join(886093..886144,886215..886426))	Acanthamoeba castellanii str. Neff	14922039
ACA1_284090	CDS	ACA1_284090	NW_004457586.1	887447	888576	R	encoded by transcript ACA1_284090A; uncharacterized protein	complement(join(887447..887538,887736..887887,887979..888179,888287..888392,888462..888576))	Acanthamoeba castellanii str. Neff	14922040
ACA1_284100	CDS	ACA1_284100	NW_004457586.1	888784	888954	R	encoded by transcript ACA1_284100A; uncharacterized protein	complement(888784..888954)	Acanthamoeba castellanii str. Neff	14922041
ACA1_284210	CDS	ACA1_284210	NW_004457586.1	890317	892007	R	encoded by transcript ACA1_284210A; oxoglutarate carrier, putative	complement(join(890317..890414,890502..890665,890701..890831,890975..891139,891281..891401,891509..891613,891898..892007))	Acanthamoeba castellanii str. Neff	14922042
ACA1_284220	CDS	ACA1_284220	NW_004457586.1	892274	893071	R	encoded by transcript ACA1_284220A; uncharacterized protein	complement(join(892274..892336,892445..892557,892716..892748,892816..893071))	Acanthamoeba castellanii str. Neff	14922043
ACA1_284230	CDS	ACA1_284230	NW_004457586.1	893439	895644	R	encoded by transcript ACA1_284230A; pyruvate kinase, barrel domain containing protein	complement(join(893439..893524,893642..893769,893861..894134,894207..894347,894433..894792,894878..894983,895061..895159,895270..895644))	Acanthamoeba castellanii str. Neff	14922044
ACA1_284240	CDS	ACA1_284240	NW_004457586.1	896267	909994	R	encoded by transcript ACA1_284240A; zinc finger, C3HC4 type (RING finger) domain containing protein	complement(join(896267..896789,896879..896976,897061..897236,897311..897441,897522..897580,897649..897762,897850..897968,898074..898259,898522..898595,898659..898762,898898..898989,899113..899201,899275..899378,899498..899629,899757..899962,900089..900161,900186..900242,900355..900460,900554..900673,900783..900866,900976..901787,901965..902592,902696..902901,903029..903101,903172..903260,903484..903596,903707..903822,903916..904029,904133..904216,904357..904488,904631..904890,904981..905095,905130..905278,905403..905540,905618..905703,905813..905882,905995..906143,906232..906328,906457..906565,906674..906873,906935..907058,907124..907292,907418..907508,907590..907681,907783..907861,907934..908135,908216..908464,908595..908719,908787..908891,909003..909196,909296..909359,909439..909480,909602..909689,909894..909994))	Acanthamoeba castellanii str. Neff	14922045
ACA1_284250	CDS	ACA1_284250	NW_004457586.1	910753	911943	D	encoded by transcript ACA1_284250A; uncharacterized protein	join(910753..910885,910980..911041,911145..911196,911259..911320,911445..911543,911632..911943)	Acanthamoeba castellanii str. Neff	14922046
ACA1_284260	CDS	ACA1_284260	NW_004457586.1	912068	915401	R	encoded by transcript ACA1_284260A; uncharacterized protein	complement(join(912068..913012,913110..913364,913454..913522,913534..913693,913771..913873,913948..914134,914198..914781,914858..915401))	Acanthamoeba castellanii str. Neff	14922047
ACA1_284270	CDS	ACA1_284270	NW_004457586.1	915538	916840	R	encoded by transcript ACA1_284270A; adal protein	complement(join(915538..915648,916263..916304,916394..916466,916557..916705,916793..916840))	Acanthamoeba castellanii str. Neff	14922048
ACA1_284380	CDS	ACA1_284380	NW_004457586.1	917010	917908	D	encoded by transcript ACA1_284380A; uncharacterized protein	join(<917010..917151,917217..917486,917570..917677,917772..917908)	Acanthamoeba castellanii str. Neff	14922049
ACA1_284500	CDS	ACA1_284500	NW_004457586.1	923771	926448	D	encoded by transcript ACA1_284500A; uncharacterized protein	join(923771..924379,924516..924624,924841..924897,925059..925219,925301..925460,925590..925673,925772..925890,925981..926054,926127..926448)	Acanthamoeba castellanii str. Neff	14922051
ACA1_284510	CDS	ACA1_284510	NW_004457586.1	926760	928827	R	encoded by transcript ACA1_284510A; RhoGEF domain containing protein	complement(join(926760..927001,927022..927171,927256..927319,927429..927525,927603..927661,927737..927832,927902..928006,928089..928250,928345..928454,928516..928696,928798..928827))	Acanthamoeba castellanii str. Neff	14922052
ACA1_284620	CDS	ACA1_284620	NW_004457586.1	929255	930111	D	encoded by transcript ACA1_284620A; mitogenactivated protein kinase	join(929255..929446,929527..929643,929669..929849,929894..930111)	Acanthamoeba castellanii str. Neff	14922053
ACA1_284730	CDS	ACA1_284730	NW_004457586.1	932618	934058	R	encoded by transcript ACA1_284730A; PH domain containing protein	complement(join(932618..932646,932720..932923,932944..933093,933172..933235,933345..933441,933519..933577,933659..933754,933822..933926,934008..934058))	Acanthamoeba castellanii str. Neff	14922054
ACA1_284840	CDS	ACA1_284840	NW_004457586.1	934537	935955	D	encoded by transcript ACA1_284840A; phosphoglycerate mutase family protein, putative	join(934537..934614,934798..934909,934964..935045,935204..935281,935387..935578,935703..935955)	Acanthamoeba castellanii str. Neff	14922055
ACA1_284850	CDS	ACA1_284850	NW_004457586.1	936651	938931	R	encoded by transcript ACA1_284850A; Actin1	complement(join(936651..937064,937181..937208,937354..937535,937637..937762,937899..938525,938599..938931))	Acanthamoeba castellanii str. Neff	14922056
ACA1_285060	CDS	ACA1_285060	NW_004457586.1	941132	942187	R	encoded by transcript ACA1_285060A; Na+/H+ antiporter, putative	complement(join(941132..941159,941257..941337,941393..941521,941586..941764,941825..941920,941992..942076,942147..942187))	Acanthamoeba castellanii str. Neff	14922057
ACA1_285170	CDS	ACA1_285170	NW_004457586.1	942319	944184	D	encoded by transcript ACA1_285170A; phosphoglycerate mutase family domain containing protein	join(942319..942389,942497..942598,942697..942778,943005..943084,943395..943472,943585..943776,943869..944184)	Acanthamoeba castellanii str. Neff	14922058
ACA1_285180	CDS	ACA1_285180	NW_004457586.1	945627	947308	D	encoded by transcript ACA1_285180A; uncharacterized protein	join(945627..945719,945887..946112,946303..946696,946770..946872,946940..946978,947037..947081,947150..947308)	Acanthamoeba castellanii str. Neff	14922059
ACA1_285190	CDS	ACA1_285190	NW_004457586.1	949200	953195	R	encoded by transcript ACA1_285190A; transporter, monovalent cation:proton antiporter2 (CPA2) family protein	complement(join(949200..949931,950029..950597,950662..950770,950843..950974,951047..951224,951297..951377,951432..951560,951634..951812,951880..951975,952047..952131,952202..952342,952414..952571,952635..952807,952906..953022,953075..953195))	Acanthamoeba castellanii str. Neff	14922060
ACA1_285200	CDS	ACA1_285200	NW_004457586.1	953566	957723	R	encoded by transcript ACA1_285200A; transporter, monovalent cation:proton antiporter2 (CPA2) family protein	complement(join(953566..954204,954288..954883,954999..955236,955322..955499,955584..955664,955743..955871,956025..956203,956289..956384,956480..956564,956657..956797,956867..957024,957101..957273,957360..957476,957591..957723))	Acanthamoeba castellanii str. Neff	14922061
ACA1_285210	CDS	ACA1_285210	NW_004457586.1	958392	961552	R	encoded by transcript ACA1_285210A; protein kinase domain containing protein	complement(join(958392..958466,958589..958665,958742..958937,959064..959155,959231..959360,959466..959662,959766..959902,959996..960228,960313..960452,960585..960693,960827..960916,961061..961182,961326..961396,961491..961552))	Acanthamoeba castellanii str. Neff	14922062
ACA1_285220	CDS	ACA1_285220	NW_004457586.1	961641	963622	D	encoded by transcript ACA1_285220A; protein prenyltransferase alpha subunit repeat-containing protein	join(961641..961649,961768..961878,961994..962563,962697..962768,962832..962901,963017..963136,963223..963345,963445..963499,963607..963622)	Acanthamoeba castellanii str. Neff	14922063
ACA1_285330	CDS	ACA1_285330	NW_004457586.1	965590	966021	R	encoded by transcript ACA1_285330A; uncharacterized protein	complement(<965590..966021)	Acanthamoeba castellanii str. Neff	14922064
ACA1_285340	CDS	ACA1_285340	NW_004457586.1	966541	967691	R	encoded by transcript ACA1_285340A; DnaJ domain containing protein	complement(join(966541..966572,966670..966892,967035..967120,967211..967347,967450..967531,967607..967691))	Acanthamoeba castellanii str. Neff	14922065
ACA1_285450	CDS	ACA1_285450	NW_004457586.1	967826	968812	R	encoded by transcript ACA1_285450A; dual specificity protein phosphatase	complement(join(967826..967989,968115..968231,968341..968477,968564..968645,968716..968812))	Acanthamoeba castellanii str. Neff	14922066
ACA1_285460	CDS	ACA1_285460	NW_004457586.1	970305	971226	D	encoded by transcript ACA1_285460A; uncharacterized protein	join(970305..970400,970480..971226)	Acanthamoeba castellanii str. Neff	14922067
ACA1_285470	CDS	ACA1_285470	NW_004457586.1	971974	974779	D	encoded by transcript ACA1_285470A; uncharacterized protein	join(971974..972666,972699..973059,973197..973359,973534..973834,973891..974043,974127..974432,974540..974779)	Acanthamoeba castellanii str. Neff	14922068
ACA1_285480	CDS	ACA1_285480	NW_004457586.1	975083	977526	R	encoded by transcript ACA1_285480A; uncharacterized protein	complement(join(975083..975126,975212..975353,975438..975554,975648..975794,975876..976145,976263..976426,976529..976663,976725..977526))	Acanthamoeba castellanii str. Neff	14922069
ACA1_285490	CDS	ACA1_285490	NW_004457586.1	977705	979776	R	encoded by transcript ACA1_285490A; THUMP domain containing 3 isoform 1, putative	complement(join(977705..977785,977859..977949,978054..978115,978237..978368,978462..978589,978694..978850,978955..979087,979184..979560,979615..979776))	Acanthamoeba castellanii str. Neff	14922070
ACA1_285500	CDS	ACA1_285500	NW_004457586.1	980311	981138	D	encoded by transcript ACA1_285500A; uncharacterized protein	join(980311..980518,980609..980844,980859..980904,981035..981138)	Acanthamoeba castellanii str. Neff	14922071
ACA1_285510	CDS	ACA1_285510	NW_004457586.1	982164	983403	R	encoded by transcript ACA1_285510A; pol polyprotein	complement(join(982164..982184,982343..982540,982595..982957,982999..983403))	Acanthamoeba castellanii str. Neff	14922072
ACA1_285520	CDS	ACA1_285520	NW_004457586.1	984048	984719	R	encoded by transcript ACA1_285520A; uncharacterized protein	complement(join(984048..984350,984537..984719))	Acanthamoeba castellanii str. Neff	14922073
ACA1_285530	CDS	ACA1_285530	NW_004457586.1	986562	986897	R	encoded by transcript ACA1_285530A; uncharacterized protein	complement(join(986562..986642,986676..986897))	Acanthamoeba castellanii str. Neff	14922074
ACA1_285540	CDS	ACA1_285540	NW_004457586.1	989430	995588	R	encoded by transcript ACA1_285540A; REJ domain containing protein	complement(join(989430..990208,990280..990418,990493..990653,990745..991050,991119..991409,991478..991795,991867..992201,992295..992445,992516..992689,992794..992904,992982..993245,993336..993579,993669..993737,993807..993875,993963..994031,994109..994249,994343..994483,994580..994717,994809..994880,994949..995017,995093..995170,995295..995351,995424..995588))	Acanthamoeba castellanii str. Neff	14922075
ACA1_285550	CDS	ACA1_285550	NW_004457586.1	996160	1002181	R	encoded by transcript ACA1_285550A; uncharacterized protein	complement(join(996160..996398,996483..996735,996824..997526,997620..997709,997792..997947,998067..998156,998230..998383,998524..998692,998802..998897,998989..999068,999323..999446,999518..999664,999756..1000406,1000482..1001137,1001242..1002181))	Acanthamoeba castellanii str. Neff	14922076
ACA1_285560	CDS	ACA1_285560	NW_004457586.1	1003176	1005834	D	encoded by transcript ACA1_285560A; Ras subfamily protein	join(1003176..1003203,1003276..1003683,1003747..1003823,1003898..1003988,1004082..1004185,1004252..1004422,1004491..1004644,1004731..1004870,1004944..1005019,1005084..1005191,1005257..1005312,1005410..1005516,1005615..1005645,1005709..1005834)	Acanthamoeba castellanii str. Neff	14922077
ACA1_285570	CDS	ACA1_285570	NW_004457586.1	1006155	1008098	D	encoded by transcript ACA1_285570A; leucine rich repeat domain containing protein	join(1006155..1006208,1006331..1006501,1006625..1006693,1006806..1006888,1007022..1007169,1007270..1007361,1007444..1007480,1007697..1007810,1007949..1008098)	Acanthamoeba castellanii str. Neff	14922078
ACA1_285580	CDS	ACA1_285580	NW_004457586.1	1008597	1008977	D	encoded by transcript ACA1_285580A; peroxidase ppod1, putative	1008597..1008977	Acanthamoeba castellanii str. Neff	14922079
ACA1_285590	CDS	ACA1_285590	NW_004457586.1	1009207	1009920	R	encoded by transcript ACA1_285590A; Raslike protein rasG, putative	complement(join(1009207..1009531,1009543..1009611,1009730..1009920))	Acanthamoeba castellanii str. Neff	14922080
ACA1_285600	CDS	ACA1_285600	NW_004457586.1	1010080	1010754	D	encoded by transcript ACA1_285600A; uncharacterized protein	join(1010080..1010149,1010378..1010483,1010679..1010754)	Acanthamoeba castellanii str. Neff	14922081
ACA1_285610	CDS	ACA1_285610	NW_004457586.1	1011434	1013742	R	encoded by transcript ACA1_285610A; uncharacterized protein	complement(join(1011434..1011759,1011889..1012051,1012238..1012337,1012479..1012687,1012793..1012951,1013071..1013306,1013469..1013742))	Acanthamoeba castellanii str. Neff	14922082
ACA1_285620	CDS	ACA1_285620	NW_004457586.1	1013863	1015744	R	encoded by transcript ACA1_285620A; regulator of chromosome condensation (RCC1) repeat domain containing protein	complement(join(1013863..1014026,1014113..1014271,1014380..1014583,1014639..1014782,1014906..1015019,1015096..1015254,1015332..1015490,1015594..1015744))	Acanthamoeba castellanii str. Neff	14922083
ACA1_285630	CDS	ACA1_285630	NW_004457586.1	1015884	1016643	D	encoded by transcript ACA1_285630A; zinc finger protein bud20, putative	join(1015884..1015962,1016057..1016067,1016156..1016244,1016354..1016482,1016520..1016643)	Acanthamoeba castellanii str. Neff	14922084
ACA1_285640	CDS	ACA1_285640	NW_004457586.1	1016873	1018701	D	encoded by transcript ACA1_285640A; WD repeat domain 5 family protein	join(1016873..1016978,1017053..1017126,1017188..1017277,1017453..1017579,1017687..1017789,1017909..1017974,1018120..1018298,1018387..1018461,1018583..1018701)	Acanthamoeba castellanii str. Neff	14922085
ACA1_285650	CDS	ACA1_285650	NW_004457586.1	1018807	1020498	R	encoded by transcript ACA1_285650A; G-patch domain containing protein	complement(join(1018807..1018945,1019052..1019584,1019665..1020498))	Acanthamoeba castellanii str. Neff	14922086
ACA1_285660	CDS	ACA1_285660	NW_004457586.1	1021099	1023338	R	encoded by transcript ACA1_285660A; uncharacterized protein	complement(join(1021099..1021112,1021153..1021497,1021542..1022538,1022670..1023338))	Acanthamoeba castellanii str. Neff	14922087
ACA1_285670	CDS	ACA1_285670	NW_004457586.1	1023843	1025012	R	encoded by transcript ACA1_285670A; uncharacterized protein	complement(join(1023843..1024656,1024721..1024823,1024949..>1025012))	Acanthamoeba castellanii str. Neff	14922088
ACA1_285680	CDS	ACA1_285680	NW_004457586.1	1025180	1026415	D	encoded by transcript ACA1_285680A; uncharacterized protein	join(1025180..1025513,1025580..1025869,1025936..1026129,1026193..1026415)	Acanthamoeba castellanii str. Neff	14922089
ACA1_285800	CDS	ACA1_285800	NW_004457586.1	1027564	1027800	R	encoded by transcript ACA1_285800A; uncharacterized protein	complement(1027564..1027800)	Acanthamoeba castellanii str. Neff	14922091
ACA1_285910	CDS	ACA1_285910	NW_004457586.1	1028141	1028359	D	encoded by transcript ACA1_285910A; uncharacterized protein	<1028141..1028359	Acanthamoeba castellanii str. Neff	14922092
ACA1_286130	CDS	ACA1_286130	NW_004457586.1	1032667	1037745	R	encoded by transcript ACA1_286130A; uncharacterized protein	complement(join(1032667..1032950,1033012..1033216,1033323..1033496,1033632..1033838,1033952..1034166,1034239..1034422,1034493..1034614,1034723..1034905,1035011..1035104,1035182..1035296,1035353..1035464,1035573..1035687,1035788..1036200,1036318..1036523,1036589..1036755,1036834..1036910,1036980..1037745))	Acanthamoeba castellanii str. Neff	14922094
ACA1_286140	CDS	ACA1_286140	NW_004457586.1	1038654	1040617	D	encoded by transcript ACA1_286140A; Ras subfamily protein	join(1038654..1038943,1039221..1039310,1039412..1039505,1039607..1039687,1039794..1039841,1039933..1040055,1040158..1040256,1040369..1040617)	Acanthamoeba castellanii str. Neff	14922095
ACA1_286150	CDS	ACA1_286150	NW_004457586.1	1041084	1042876	D	encoded by transcript ACA1_286150A; RhoGAP domain containing protein	join(1041084..1041516,1041637..1041869,1041907..1042033,1042134..1042252,1042344..1042612,1042753..1042876)	Acanthamoeba castellanii str. Neff	14922096
ACA1_286170	CDS	ACA1_286170	NW_004457586.1	1049143	1052890	D	encoded by transcript ACA1_286170A; alanyl dipeptidyl peptidase	join(1049143..1049364,1049511..1049621,1049723..1049816,1049935..1050033,1050155..1050268,1050356..1050451,1050548..1050677,1050771..1050848,1050953..1051043,1051109..1051206,1051279..1051593,1051713..1051777,1051857..1051931,1052020..1052115,1052244..1052393,1052511..1052730,1052836..1052890)	Acanthamoeba castellanii str. Neff	14922098
ACA1_286180	CDS	ACA1_286180	NW_004457586.1	1053297	1054303	R	encoded by transcript ACA1_286180A; acetyltransferase, GNAT superfamily protein	complement(join(1053297..1053499,1053573..1053679,1053777..1053902,1053993..1054056,1054123..1054303))	Acanthamoeba castellanii str. Neff	14922099
ACA1_286390	CDS	ACA1_286390	NW_004457586.1	1059563	1060068	D	encoded by transcript ACA1_286390A; uncharacterized protein	join(1059563..1060013,1060058..1060068)	Acanthamoeba castellanii str. Neff	14922100
ACA1_286600	CDS	ACA1_286600	NW_004457586.1	1068059	1075305	R	encoded by transcript ACA1_286600A; midasin family protein	complement(join(1068059..1069933,1070071..1071516,1071581..1072354,1072432..1072620,1072720..1072939,1073029..1073242,1073341..1073757,1073834..1073984,1074566..1075096,1075183..1075305))	Acanthamoeba castellanii str. Neff	14922101
ACA1_052170	CDS	ACA1_052170	NW_004457584.1	104	487	D	encoded by transcript ACA1_052170A; uncharacterized protein	join(104..211,320..487)	Acanthamoeba castellanii str. Neff	14921684
ACA1_052180	CDS	ACA1_052180	NW_004457584.1	595	2377	R	encoded by transcript ACA1_052180A; apoptosisrelated protein PNAS-4, putative	complement(join(595..636,712..784,858..967,1113..1220,1355..1454,1575..1647,1813..1895,2015..2126,2260..2377))	Acanthamoeba castellanii str. Neff	14921392
ACA1_052190	CDS	ACA1_052190	NW_004457584.1	2532	5983	R	encoded by transcript ACA1_052190A; uncharacterized protein	complement(join(2532..2920,2994..4121,4206..4359,4459..4563,4644..4747,4880..5007,5117..5216,5308..5458,5554..5696,5800..5983))	Acanthamoeba castellanii str. Neff	14921393
ACA1_052200	CDS	ACA1_052200	NW_004457584.1	6139	7991	R	encoded by transcript ACA1_052200A; ribosome biogenesis GTPase Era, putative	complement(join(6139..6267,6389..6568,6689..6742,6820..6942,7065..7183,7317..7372,7450..7496,7621..7704,7800..7991))	Acanthamoeba castellanii str. Neff	14921394
ACA1_052210	CDS	ACA1_052210	NW_004457584.1	8564	10410	R	encoded by transcript ACA1_052210A; RasGEF domain containing protein	complement(join(8564..8769,8889..9018,9108..9188,9282..9374,9486..9575,9654..9728,9822..9896,9985..10134,10219..10410))	Acanthamoeba castellanii str. Neff	14921395
ACA1_052220	CDS	ACA1_052220	NW_004457584.1	10652	14110	R	encoded by transcript ACA1_052220A; uncharacterized protein	complement(join(10652..10806,10901..10968,11097..11557,11623..11998,12084..14110))	Acanthamoeba castellanii str. Neff	14921396
ACA1_052230	CDS	ACA1_052230	NW_004457584.1	14671	15264	R	encoded by transcript ACA1_052230A; uncharacterized protein	complement(14671..15264)	Acanthamoeba castellanii str. Neff	14921397
ACA1_052250	CDS	ACA1_052250	NW_004457584.1	20000	23871	D	encoded by transcript ACA1_052250A; acetylCoA carboxylase, biotin carboxylase subunit, putative	join(20000..20174,20261..20330,20414..20585,20730..20851,20976..21123,21249..21364,21466..21583,21696..22003,22080..22176,22317..22418,22521..22613,22763..22898,23007..23197,23301..23385,23477..23700,23773..23871)	Acanthamoeba castellanii str. Neff	14921399
ACA1_052260	CDS	ACA1_052260	NW_004457584.1	23988	28139	R	encoded by transcript ACA1_052260A; leucine rich repeat domain containing protein	complement(join(23988..24058,24167..24301,24408..24689,24764..24889,25024..25149,25275..25437,25545..25678,25767..25901,26125..26199,26369..26440,26533..26607,26765..26830,26975..27136,27238..27351,27490..27661,27771..28139))	Acanthamoeba castellanii str. Neff	14921400
ACA1_052270	CDS	ACA1_052270	NW_004457584.1	28461	29724	D	encoded by transcript ACA1_052270A; Ankyrin repeat containing protein	join(28461..28877,28965..29027,29099..29179,29332..29724)	Acanthamoeba castellanii str. Neff	14921401
ACA1_052280	CDS	ACA1_052280	NW_004457584.1	30281	32804	D	encoded by transcript ACA1_052280A; uncharacterized protein	join(30281..30345,30620..31354,31508..31607,31715..31800,31924..32038,32310..32804)	Acanthamoeba castellanii str. Neff	14921402
ACA1_052290	CDS	ACA1_052290	NW_004457584.1	33164	35711	D	encoded by transcript ACA1_052290A; uncharacterized protein	join(33164..33252,33473..34585,34756..34855,34941..35026,35120..35711)	Acanthamoeba castellanii str. Neff	14921403
ACA1_052300	CDS	ACA1_052300	NW_004457584.1	35792	40422	R	encoded by transcript ACA1_052300A; uncharacterized protein	complement(join(35792..36244,36334..36448,36583..36665,36767..36869,37005..37823,38249..38325,38406..38510,38543..38641,38738..38852,38967..39049,39147..39246,39327..39468,39676..40018,40333..40422))	Acanthamoeba castellanii str. Neff	14921404
ACA1_052310	CDS	ACA1_052310	NW_004457584.1	40958	41447	D	encoded by transcript ACA1_052310A; uncharacterized protein	join(40958..41035,41144..41239,41325..41447)	Acanthamoeba castellanii str. Neff	14921405
ACA1_052320	CDS	ACA1_052320	NW_004457584.1	41557	43327	R	encoded by transcript ACA1_052320A; phosphatidylcholinesterol acyltransferase (lecithin-cholesterol acyltransferase), putative	complement(join(41557..41825,41910..42045,42149..42241,42337..42476,42550..42672,42858..42980,43069..43214,43281..43327))	Acanthamoeba castellanii str. Neff	14921406
ACA1_052330	CDS	ACA1_052330	NW_004457584.1	43867	48636	R	encoded by transcript ACA1_052330A; leucine rich repeat domain containing protein	complement(join(43867..44023,44207..44692,44795..45679,45878..45983,46098..46263,46379..46521,46601..46709,46905..47071,47151..47253,47387..47553,47622..47885,47988..48098,48228..48288,48607..48636))	Acanthamoeba castellanii str. Neff	14921407
ACA1_052340	CDS	ACA1_052340	NW_004457584.1	49156	51134	D	encoded by transcript ACA1_052340A; zinc finger, C3HC4 type (RING finger) domain containing protein	join(49156..49168,49492..49637,49696..49760,49875..49995,50074..50433,50569..50871,50988..51134)	Acanthamoeba castellanii str. Neff	14921408
ACA1_052350	CDS	ACA1_052350	NW_004457584.1	51303	52059	R	encoded by transcript ACA1_052350A; uncharacterized protein	complement(join(51303..51380,51448..51561,51636..51731,51805..51863,51934..51964,52033..52059))	Acanthamoeba castellanii str. Neff	14921409
ACA1_052360	CDS	ACA1_052360	NW_004457584.1	52327	53094	D	encoded by transcript ACA1_052360A; uncharacterized protein	52327..53094	Acanthamoeba castellanii str. Neff	14921410
ACA1_052370	CDS	ACA1_052370	NW_004457584.1	53389	54042	D	encoded by transcript ACA1_052370A; MORM repeat family protein	53389..54042	Acanthamoeba castellanii str. Neff	14921411
ACA1_052390	CDS	ACA1_052390	NW_004457584.1	56756	60510	R	encoded by transcript ACA1_052390A; nucleolar protein, putative	complement(join(56756..56958,57063..57127,57201..57280,57443..57718,57799..57920,58004..58071,58154..58245,58318..58368,58440..58528,58625..58741,58846..58993,59320..59427,59592..59724,59905..59974,60181..60265,60412..60510))	Acanthamoeba castellanii str. Neff	14921413
ACA1_052400	CDS	ACA1_052400	NW_004457584.1	60743	65560	D	encoded by transcript ACA1_052400A; RhoGEF domain containing protein	join(60743..60772,60849..60917,61069..61137,61293..61447,61551..61612,61735..63602,63688..63891,64017..64211,64302..64394,64502..64597,64688..64794,64984..65132,65227..65347,65488..65560)	Acanthamoeba castellanii str. Neff	14921414
ACA1_052420	CDS	ACA1_052420	NW_004457584.1	67467	70127	D	encoded by transcript ACA1_052420A; uncharacterized protein	join(67467..67673,67754..67918,67956..68510,68550..69795,69826..70127)	Acanthamoeba castellanii str. Neff	14921416
ACA1_052430	CDS	ACA1_052430	NW_004457584.1	70600	75567	R	encoded by transcript ACA1_052430A; uncharacterized protein	complement(join(70600..70643,70724..71322,71419..71615,71681..72182,72265..72521,72596..73111,73228..73444,73489..73970,73997..74068,74161..74354,74397..74541,74662..74769,75025..75476,75540..75567))	Acanthamoeba castellanii str. Neff	14921417
ACA1_052440	CDS	ACA1_052440	NW_004457584.1	75748	77585	R	encoded by transcript ACA1_052440A; GPI mannosyltransferase 1, putative	complement(join(75748..75891,75962..76063,76146..76734,76798..77175,77256..77367,77459..77585))	Acanthamoeba castellanii str. Neff	14921418
ACA1_052450	CDS	ACA1_052450	NW_004457584.1	77718	78110	D	encoded by transcript ACA1_052450A; uncharacterized protein	join(77718..77846,77910..78110)	Acanthamoeba castellanii str. Neff	14921419
ACA1_052460	CDS	ACA1_052460	NW_004457584.1	78646	80832	D	encoded by transcript ACA1_052460A; uncharacterized protein	join(78646..78755,78854..80023,80091..80193,80338..80423,80541..80655,80731..80832)	Acanthamoeba castellanii str. Neff	14921420
ACA1_052470	CDS	ACA1_052470	NW_004457584.1	81224	82867	D	encoded by transcript ACA1_052470A; uncharacterized protein	join(81224..81460,81637..81864,81959..82072,82155..82312,82398..82527,82640..82867)	Acanthamoeba castellanii str. Neff	14921421
ACA1_052480	CDS	ACA1_052480	NW_004457584.1	82909	86428	R	encoded by transcript ACA1_052480A; uncharacterized protein	complement(join(82909..83111,83201..83729,83857..83982,84075..84277,84415..84542,84678..84804,84898..85205,85363..85849,85953..86087,86142..86279,86356..86428))	Acanthamoeba castellanii str. Neff	14921422
ACA1_052490	CDS	ACA1_052490	NW_004457584.1	86842	87798	D	encoded by transcript ACA1_052490A; Gpatch domain containing protein	join(86842..87096,87307..87798)	Acanthamoeba castellanii str. Neff	14921423
ACA1_052500	CDS	ACA1_052500	NW_004457584.1	87950	91929	R	encoded by transcript ACA1_052500A; WD domain, G-beta repeat-containing protein	complement(join(87950..88509,88556..88735,88835..88927,89037..89125,89283..89382,89554..89907,90023..90683,90834..91396,91654..91700,91886..91929))	Acanthamoeba castellanii str. Neff	14921424
ACA1_052510	CDS	ACA1_052510	NW_004457584.1	92128	93747	D	encoded by transcript ACA1_052510A; PQ loop repeat family protein	join(92128..92273,92402..92523,92613..92676,92782..92876,93004..93043,93149..93252,93334..93398,93516..93617,93697..93747)	Acanthamoeba castellanii str. Neff	14921425
ACA1_052520	CDS	ACA1_052520	NW_004457584.1	93958	95999	D	encoded by transcript ACA1_052520A; carrier superfamily protein	join(93958..93997,94181..94237,94322..94392,94455..94516,94589..94709,95099..95202,95322..95389,95485..95581,95678..95999)	Acanthamoeba castellanii str. Neff	14921426
ACA1_052530	CDS	ACA1_052530	NW_004457584.1	96137	99799	R	encoded by transcript ACA1_052530A; uncharacterized protein	complement(join(96137..96342,96429..96810,96918..97046,97152..97367,97522..97652,97786..97851,98060..98121,98207..98333,98418..98728,98805..99120,99281..99385,99499..99597,99727..99799))	Acanthamoeba castellanii str. Neff	14921427
ACA1_052540	CDS	ACA1_052540	NW_004457584.1	100115	102514	R	encoded by transcript ACA1_052540A; Ankyrin domain containing ras subfamily protein	complement(join(100115..100291,100379..100538,100679..100758,101062..101138,101220..101314,101579..101756,101956..102029,102360..102514))	Acanthamoeba castellanii str. Neff	14921428
ACA1_052550	CDS	ACA1_052550	NW_004457584.1	102685	103230	D	encoded by transcript ACA1_052550A; Ras family protein	102685..103230	Acanthamoeba castellanii str. Neff	14921429
ACA1_052560	CDS	ACA1_052560	NW_004457584.1	104498	105265	D	encoded by transcript ACA1_052560A; glucose dehydrogenase	104498..105265	Acanthamoeba castellanii str. Neff	14921430
ACA1_052570	CDS	ACA1_052570	NW_004457584.1	105775	107136	D	encoded by transcript ACA1_052570A; uncharacterized protein	join(105775..105936,106009..106183,106293..106472,106588..106796,106876..107136)	Acanthamoeba castellanii str. Neff	14921431
ACA1_052580	CDS	ACA1_052580	NW_004457584.1	107208	116843	R	encoded by transcript ACA1_052580A; uncharacterized protein	complement(join(107208..107408,107517..107597,107691..107866,107930..108029,108254..108440,108616..108680,108778..108906,109003..109103,109193..109423,109501..109554,109632..109739,109822..109981,110049..110267,110400..110777,110867..111004,111153..111379,111460..111544,111628..111771,111867..112495,112592..112751,112863..113003,113089..113226,113331..113471,113541..115103,115186..115485,115574..115714,115781..115961,116057..116143,116219..116285,116388..116518,116596..116660,116736..116843))	Acanthamoeba castellanii str. Neff	14921432
ACA1_052590	CDS	ACA1_052590	NW_004457584.1	117106	118051	D	encoded by transcript ACA1_052590A; PeptidyltRNA hydrolase PTH2 domain containing protein	join(117106..117204,117290..117370,117430..117536,117596..117686,117830..117899,117921..118051)	Acanthamoeba castellanii str. Neff	14921433
ACA1_052600	CDS	ACA1_052600	NW_004457584.1	118770	122199	D	encoded by transcript ACA1_052600A; uncharacterized protein	join(118770..118784,118884..119046,119120..119270,119354..119427,119496..119618,119727..119878,119978..120058,120149..120213,120352..120412,120498..120639,120720..120844,120985..121101,121232..121348,121535..121647,121713..121734,121900..122199)	Acanthamoeba castellanii str. Neff	14921434
ACA1_052610	CDS	ACA1_052610	NW_004457584.1	122393	123587	D	encoded by transcript ACA1_052610A; uncharacterized protein	join(122393..122450,122595..122743,122849..122995,123116..123358,123438..123587)	Acanthamoeba castellanii str. Neff	14921435
ACA1_052620	CDS	ACA1_052620	NW_004457584.1	133304	136846	R	encoded by transcript ACA1_052620A; uncharacterized protein	complement(join(133304..133503,133629..134010,134149..134298,134410..134529,134600..134713,134828..134934,135229..135290,135443..135569,135676..136308,136402..136512,136609..136698,136768..136846))	Acanthamoeba castellanii str. Neff	14921436
ACA1_052630	CDS	ACA1_052630	NW_004457584.1	137251	138646	R	encoded by transcript ACA1_052630A; uncharacterized protein	complement(join(137251..137334,137453..137542,137676..137805,137895..138180,138310..138646))	Acanthamoeba castellanii str. Neff	14921437
ACA1_052640	CDS	ACA1_052640	NW_004457584.1	139290	142256	D	encoded by transcript ACA1_052640A; electron transfer flavoproteinubiquinone oxidoreductase, mitochondrial, putative	join(139290..139467,139578..139742,139904..139980,140064..140159,140260..140358,140445..140658,140742..140813,140949..141079,141205..141400,141487..141602,141686..141983,142078..142256)	Acanthamoeba castellanii str. Neff	14921438
ACA1_052650	CDS	ACA1_052650	NW_004457584.1	142382	143398	R	encoded by transcript ACA1_052650A; HMG (high mobility group) box domain containing protein	complement(join(142382..142623,142693..143398))	Acanthamoeba castellanii str. Neff	14921439
ACA1_052660	CDS	ACA1_052660	NW_004457584.1	143590	143868	D	encoded by transcript ACA1_052660A; uncharacterized protein	143590..143868	Acanthamoeba castellanii str. Neff	14921440
ACA1_052670	CDS	ACA1_052670	NW_004457584.1	144584	149974	D	encoded by transcript ACA1_052670A; SAM domain (Sterile alpha motif) domain containing protein	join(144584..144809,145223..146036,146139..146619,146662..146782,146853..149974)	Acanthamoeba castellanii str. Neff	14921441
ACA1_052680	CDS	ACA1_052680	NW_004457584.1	150232	151816	R	encoded by transcript ACA1_052680A; ubiquitin domain containing protein	complement(join(150232..150477,150556..150836,150989..151099,151276..151428,151528..151816))	Acanthamoeba castellanii str. Neff	14921442
ACA1_052690	CDS	ACA1_052690	NW_004457584.1	152130	155208	D	encoded by transcript ACA1_052690A; RhoGAP domain containing protein	join(152130..152920,152988..153115,153274..153465,153604..153821,154031..154150,154239..154320,154403..154489,154583..154705,154913..155208)	Acanthamoeba castellanii str. Neff	14921443
ACA1_052710	CDS	ACA1_052710	NW_004457584.1	157295	158448	D	encoded by transcript ACA1_052710A; PAP2 superfamily domain containing protein	join(157295..157858,158040..158163,158303..158448)	Acanthamoeba castellanii str. Neff	14921445
ACA1_052720	CDS	ACA1_052720	NW_004457584.1	158799	164177	D	encoded by transcript ACA1_052720A; uncharacterized protein	join(158799..158958,159122..159199,159288..159350,159460..159710,159813..159998,160070..160200,160294..160463,160547..160709,160885..160966,161078..161269,161476..161730,161824..161905,162232..162399,162496..162593,162693..162785,162879..162935,163225..163387,163493..163823,163838..164177)	Acanthamoeba castellanii str. Neff	14921446
ACA1_052730	CDS	ACA1_052730	NW_004457584.1	164915	166951	R	encoded by transcript ACA1_052730A; cytidine and deoxycytidylate deaminase zincbinding region domain containing protein	complement(join(164915..165310,165384..165441,165539..165727,165836..166008,166107..166288,166363..166580,166707..166951))	Acanthamoeba castellanii str. Neff	14921447
ACA1_052740	CDS	ACA1_052740	NW_004457584.1	167565	170818	D	encoded by transcript ACA1_052740A; zinc knuckle domain containing protein	join(167565..168324,168481..168602,168700..168825,168976..169089,169192..169310,169445..169532,169632..169724,169859..170000,170102..170254,170333..170410,170488..170553,170673..170818)	Acanthamoeba castellanii str. Neff	14921448
ACA1_052750	CDS	ACA1_052750	NW_004457584.1	171164	173644	D	encoded by transcript ACA1_052750A; sensor histidine kinase	join(171164..171695,171862..173376,173478..173644)	Acanthamoeba castellanii str. Neff	14921449
ACA1_052760	CDS	ACA1_052760	NW_004457584.1	174269	175474	R	encoded by transcript ACA1_052760A; uncharacterized protein	complement(join(174269..174344,174406..174538,174593..174752,174844..175142,175176..175274,175471..175474))	Acanthamoeba castellanii str. Neff	14921450
ACA1_052770	CDS	ACA1_052770	NW_004457584.1	175686	177136	R	encoded by transcript ACA1_052770A; Ubiquitinconjugating enzyme subfamily protein	complement(join(175686..176437,176539..177136))	Acanthamoeba castellanii str. Neff	14921451
ACA1_052780	CDS	ACA1_052780	NW_004457584.1	177329	179919	R	encoded by transcript ACA1_052780A; Fbox domain containing protein	complement(join(177329..177671,177953..178097,178174..178266,178366..178501,178588..178771,178865..179037,179140..179256,179341..179919))	Acanthamoeba castellanii str. Neff	14921452
ACA1_052790	CDS	ACA1_052790	NW_004457584.1	180502	183542	R	encoded by transcript ACA1_052790A; transportin 2, putative	complement(join(180502..181806,181941..182621,182748..183305,183441..183542))	Acanthamoeba castellanii str. Neff	14921453
ACA1_052800	CDS	ACA1_052800	NW_004457584.1	184036	184749	D	encoded by transcript ACA1_052800A; O-methyltransferase family 3 protein	184036..184749	Acanthamoeba castellanii str. Neff	14921454
ACA1_052810	CDS	ACA1_052810	NW_004457584.1	184969	188125	R	encoded by transcript ACA1_052810A; RhoGAP domain containing protein	complement(join(184969..185300,185453..185525,185682..185756,185817..185891,185995..186098,186248..186416,186673..186758,186872..187029,187178..187343,187477..188125))	Acanthamoeba castellanii str. Neff	14921455
ACA1_052820	CDS	ACA1_052820	NW_004457584.1	188377	189853	R	encoded by transcript ACA1_052820A; uncharacterized protein	complement(join(188377..188631,188736..188844,188918..189025,189127..189265,189334..189553,189610..189684,189818..189853))	Acanthamoeba castellanii str. Neff	14921456
ACA1_052830	CDS	ACA1_052830	NW_004457584.1	189965	196707	R	encoded by transcript ACA1_052830A; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain containing protein	complement(join(189965..190176,190315..190382,190509..190599,190669..190761,190839..191050,191168..191380,191496..191645,191730..191873,192089..192203,192307..192375,192492..192686,192767..192935,193055..193272,193368..193460,193559..193715,193834..193943,194048..194212,194304..194450,194523..194643,194716..194849,194987..195170,195248..195473,195577..195779,195872..195976,196084..196220,196294..196319,196418..196707))	Acanthamoeba castellanii str. Neff	14921457
ACA1_052840	CDS	ACA1_052840	NW_004457584.1	197351	199115	D	encoded by transcript ACA1_052840A; lipoprotein, putative	join(197351..197652,197740..198048,198146..198371,198405..198638,198660..199115)	Acanthamoeba castellanii str. Neff	14921458
ACA1_052860	CDS	ACA1_052860	NW_004457584.1	201153	202325	R	encoded by transcript ACA1_052860A; Ser/Thr phosphatase family superfamily protein	complement(join(201153..201658,201761..201877,202007..202325))	Acanthamoeba castellanii str. Neff	14921460
ACA1_052870	CDS	ACA1_052870	NW_004457584.1	202731	204662	D	encoded by transcript ACA1_052870A; uncharacterized protein	join(202731..202967,203039..203137,203206..203263,203356..203434,203539..203626,203641..203787,203910..204078,204193..204662)	Acanthamoeba castellanii str. Neff	14921461
ACA1_052880	CDS	ACA1_052880	NW_004457584.1	205151	205504	D	encoded by transcript ACA1_052880A; uncharacterized protein	205151..205504	Acanthamoeba castellanii str. Neff	14921462
ACA1_052890	CDS	ACA1_052890	NW_004457584.1	205970	207219	D	encoded by transcript ACA1_052890A; uncharacterized protein	join(205970..205986,206406..206493,206508..206654,206774..206942,207057..>207219)	Acanthamoeba castellanii str. Neff	14921463
ACA1_053000	CDS	ACA1_053000	NW_004457584.1	207829	208520	R	encoded by transcript ACA1_053000A; MYND finger domain containing protein	complement(join(207829..207992,208109..208283,208437..>208520))	Acanthamoeba castellanii str. Neff	14921464
ACA1_053110	CDS	ACA1_053110	NW_004457584.1	211613	218522	R	encoded by transcript ACA1_053110A; HEAT repeat domain containing protein	complement(join(211613..211624,212785..212822,213098..213252,213378..214099,214182..214587,214690..215075,215103..216309,216416..216562,216664..216824,216978..217550,217651..217726,217876..218054,218200..218328,218394..218522))	Acanthamoeba castellanii str. Neff	14921465
ACA1_053220	CDS	ACA1_053220	NW_004457584.1	218826	226906	D	encoded by transcript ACA1_053220A; peptidase family c50 subfamily protein	join(218826..218882,218941..218973,218998..219180,219245..219489,219623..219755,219838..219997,220076..220170,220247..220456,220550..220672,220766..220887,220971..221525,221613..221844,221925..222144,222235..222333,222419..222585,222802..223002,223068..223139,223313..223979,224107..224378,224516..224645,224720..225160,225287..225564,225673..225822,225936..226190,226266..226586,226691..226906)	Acanthamoeba castellanii str. Neff	14921466
ACA1_053230	CDS	ACA1_053230	NW_004457584.1	226998	228628	R	encoded by transcript ACA1_053230A; xylosyltransferase I, putative	complement(join(226998..227147,227647..227808,227918..228178,228332..228436,228572..228628))	Acanthamoeba castellanii str. Neff	14921467
ACA1_053240	CDS	ACA1_053240	NW_004457584.1	229312	230931	D	encoded by transcript ACA1_053240A; phosphoglycerate kinase	join(229312..229367,229450..229650,229731..229798,229910..230207,230301..230931)	Acanthamoeba castellanii str. Neff	14921468
ACA1_053250	CDS	ACA1_053250	NW_004457584.1	231002	236555	R	encoded by transcript ACA1_053250A; Protein-tyrosine-phosphatase	complement(join(231002..231258,231395..231462,231618..231983,232112..232652,232771..232885,232966..233235,233348..233460,233656..233893,234031..234129,234265..234370,234485..234612,234702..234737,234890..234979,235068..235141,235255..235399,235520..235630,235803..235862,235969..236039,236130..236218,236294..236352,236457..236555))	Acanthamoeba castellanii str. Neff	14921469
ACA1_053260	CDS	ACA1_053260	NW_004457584.1	237032	238240	R	encoded by transcript ACA1_053260A; DCN1 family protein 4, putative	complement(join(237032..237105,237176..237364,237485..237615,237690..237781,237844..238000,238086..238240))	Acanthamoeba castellanii str. Neff	14921470
ACA1_053270	CDS	ACA1_053270	NW_004457584.1	239022	241420	D	encoded by transcript ACA1_053270A; hydrolase, NUDIX domain containing protein	join(239022..239136,239223..239359,239474..239560,239651..239782,239856..240023,240087..240196,240305..240479,240551..241420)	Acanthamoeba castellanii str. Neff	14921471
ACA1_053280	CDS	ACA1_053280	NW_004457584.1	242158	249205	D	encoded by transcript ACA1_053280A; Eukaryotic translation initiation factor 4 gamma 3 (eIF4-gamma 3), putative	join(242158..242211,242238..242448,242577..242797,242931..243612,243706..243821,243843..244439,244514..244606,244684..244788,244873..245244,245355..245455,245564..245789,245891..246020,246123..246382,246488..246611,246642..246658,246696..246790,246909..247185,247288..247473,247558..247781,247873..248077,248179..248289,248398..248607,248701..248833,248936..249087,249185..249205)	Acanthamoeba castellanii str. Neff	14921472
ACA1_053290	CDS	ACA1_053290	NW_004457584.1	249847	250573	D	encoded by transcript ACA1_053290A; Vtype ATPase, C subunit	join(249847..249958,250105..250263,250341..250573)	Acanthamoeba castellanii str. Neff	14921473
ACA1_053300	CDS	ACA1_053300	NW_004457584.1	250857	253972	D	encoded by transcript ACA1_053300A; prolyl oligopeptidase	join(250857..251035,251163..251406,251531..251788,251884..252034,252131..252246,252360..252494,252586..252766,252890..253660,253770..253972)	Acanthamoeba castellanii str. Neff	14921474
ACA1_053310	CDS	ACA1_053310	NW_004457584.1	254781	261613	D	encoded by transcript ACA1_053310A; serine/threonine kinase	join(254781..254838,254931..255033,255110..255170,255270..255407,255484..255792,255944..256257,256329..256678,256782..257023,257179..257277,257371..257512,257619..257766,257855..258102,258172..258548,258681..258777,258880..260271,260289..260499,260587..260843,260915..261120,261215..261613)	Acanthamoeba castellanii str. Neff	14921475
ACA1_053320	CDS	ACA1_053320	NW_004457584.1	261703	263653	R	encoded by transcript ACA1_053320A; actin subfamily protein	complement(join(261703..261765,262161..262233,262494..262573,262666..262797,262890..263122,263210..263305,263382..263506,263580..263653))	Acanthamoeba castellanii str. Neff	14921476
ACA1_053330	CDS	ACA1_053330	NW_004457584.1	264257	264469	D	encoded by transcript ACA1_053330A; uncharacterized protein	264257..264469	Acanthamoeba castellanii str. Neff	14921477
ACA1_053340	CDS	ACA1_053340	NW_004457584.1	265031	267020	R	encoded by transcript ACA1_053340A; cytoplasmic dynein 1 light intermediate chain 1, putative	complement(join(265031..265383,265475..265684,265767..265973,266112..266205,266358..266611,266674..266805,266876..267020))	Acanthamoeba castellanii str. Neff	14921478
ACA1_053350	CDS	ACA1_053350	NW_004457584.1	267257	268147	D	encoded by transcript ACA1_053350A; histone H3(2), putative	join(267257..267571,267711..267829,267952..267998,268098..268147)	Acanthamoeba castellanii str. Neff	14921479
ACA1_053360	CDS	ACA1_053360	NW_004457584.1	268401	269946	D	encoded by transcript ACA1_053360A; zinc finger, domain containing protein	join(268401..268682,268851..268950,269095..269298,269384..269537,269626..269740,269821..269946)	Acanthamoeba castellanii str. Neff	14921480
ACA1_053370	CDS	ACA1_053370	NW_004457584.1	270115	272195	R	encoded by transcript ACA1_053370A; PAP2 superfamily domain containing protein	complement(join(270115..270222,270306..270546,270705..270841,270959..271226,271352..271478,271620..271827,272010..272195))	Acanthamoeba castellanii str. Neff	14921481
ACA1_053380	CDS	ACA1_053380	NW_004457584.1	272471	273363	R	encoded by transcript ACA1_053380A; uncharacterized protein	complement(join(272471..272603,272677..272793,272858..272908,273118..273142,273309..273363))	Acanthamoeba castellanii str. Neff	14921482
ACA1_053390	CDS	ACA1_053390	NW_004457584.1	274330	275031	R	encoded by transcript ACA1_053390A; prefoldin, alpha subunit	complement(join(274330..274392,274455..274509,274568..274675,274735..274836,274907..275031))	Acanthamoeba castellanii str. Neff	14921483
ACA1_053400	CDS	ACA1_053400	NW_004457584.1	275312	277057	R	encoded by transcript ACA1_053400A; START domain containing protein	complement(join(275312..275362,275467..275616,275704..275893,275969..276165,276256..276378,276499..276636,276735..276779,276872..277057))	Acanthamoeba castellanii str. Neff	14921484
ACA1_053410	CDS	ACA1_053410	NW_004457584.1	277359	278653	R	encoded by transcript ACA1_053410A; uncharacterized protein	complement(join(277359..277550,277621..277707,277784..277851,277975..278653))	Acanthamoeba castellanii str. Neff	14921485
ACA1_053420	CDS	ACA1_053420	NW_004457584.1	278769	279395	D	encoded by transcript ACA1_053420A; uncharacterized protein	278769..279395	Acanthamoeba castellanii str. Neff	14921486
ACA1_053430	CDS	ACA1_053430	NW_004457584.1	279537	280785	R	encoded by transcript ACA1_053430A; DSBA family thioredoxin domain containing protein	complement(join(279537..279922,280042..280169,280301..280358,280476..280785))	Acanthamoeba castellanii str. Neff	14921487
ACA1_053440	CDS	ACA1_053440	NW_004457584.1	281997	283679	R	encoded by transcript ACA1_053440A; EF hand domain containing protein	complement(join(281997..282037,282123..282346,282832..283034,283133..283234,283345..283397,283477..283576,283593..283679))	Acanthamoeba castellanii str. Neff	14921488
ACA1_053450	CDS	ACA1_053450	NW_004457584.1	283855	284911	D	encoded by transcript ACA1_053450A; methyltransferase domain containing protein	join(283855..283962,284015..284140,284237..284911)	Acanthamoeba castellanii str. Neff	14921489
ACA1_053470	CDS	ACA1_053470	NW_004457584.1	286420	287216	R	encoded by transcript ACA1_053470A; uncharacterized protein	complement(join(286420..286488,286568..286750,286802..286885,287097..287216))	Acanthamoeba castellanii str. Neff	14921491
ACA1_053480	CDS	ACA1_053480	NW_004457584.1	287608	289374	D	encoded by transcript ACA1_053480A; Longevityassurance protein (LAG1) domain containing protein	join(287608..287662,287764..287885,287961..288049,288192..288531,288621..288678,288747..288813,288913..289039,289135..289374)	Acanthamoeba castellanii str. Neff	14921492
ACA1_053490	CDS	ACA1_053490	NW_004457584.1	289658	291170	D	encoded by transcript ACA1_053490A; Nucleotide binding protein 1like protein, putative	join(289658..289759,289998..290101,290324..290384,290588..290677,290751..290831,290898..291170)	Acanthamoeba castellanii str. Neff	14921493
ACA1_053600	CDS	ACA1_053600	NW_004457584.1	291434	292774	R	encoded by transcript ACA1_053600A; decarboxylase, putative	complement(join(291434..291544,291687..291796,291937..292001,292147..292316,292556..292774))	Acanthamoeba castellanii str. Neff	14921494
ACA1_053610	CDS	ACA1_053610	NW_004457584.1	292993	295459	D	encoded by transcript ACA1_053610A; RNA 3'terminal phosphate cyclase	join(292993..293110,293265..293336,293517..293586,293776..293881,294000..294071,294231..294355,294482..294607,294766..294907,295060..295163,295327..295459)	Acanthamoeba castellanii str. Neff	14921495
ACA1_053620	CDS	ACA1_053620	NW_004457584.1	295807	297748	R	encoded by transcript ACA1_053620A; uncharacterized protein	complement(join(295807..295998,296121..296443,296660..296696,297015..297067,297169..297748))	Acanthamoeba castellanii str. Neff	14921496
ACA1_053630	CDS	ACA1_053630	NW_004457584.1	298032	301013	D	encoded by transcript ACA1_053630A; protein ciao1, putative	join(298032..298086,298272..298352,298408..298618,298776..298870,299045..299146,299463..299551,299692..299886,300325..300359,300486..300555,300724..300813,300855..300886,300929..301013)	Acanthamoeba castellanii str. Neff	14921497
ACA1_053640	CDS	ACA1_053640	NW_004457584.1	301388	304942	D	encoded by transcript ACA1_053640A; Transcription elongation factor, putative	301388..304942	Acanthamoeba castellanii str. Neff	14921498
ACA1_053650	CDS	ACA1_053650	NW_004457584.1	305096	307323	R	encoded by transcript ACA1_053650A; uncharacterized protein	complement(join(305096..305296,305400..305583,305707..305816,305906..306143,306335..306416,306549..307323))	Acanthamoeba castellanii str. Neff	14921499
ACA1_053660	CDS	ACA1_053660	NW_004457584.1	308383	311572	R	encoded by transcript ACA1_053660A; TNF receptor-associated protein 1, putative	complement(join(308383..309631,309786..309954,310104..310213,310318..310694,310810..311081,311548..311572))	Acanthamoeba castellanii str. Neff	14921500
ACA1_053670	CDS	ACA1_053670	NW_004457584.1	311767	314662	D	encoded by transcript ACA1_053670A; CYP, putative	join(311767..311977,312104..312307,312458..312553,312683..312852,313001..313216,313412..313539,313720..313876,313997..>314662)	Acanthamoeba castellanii str. Neff	14921501
ACA1_053780	CDS	ACA1_053780	NW_004457584.1	316701	320917	R	encoded by transcript ACA1_053780A; SNF2 family Nterminal domain containing protein	complement(join(<316701..316991,317074..317238,317381..317587,317715..317972,318104..318391,318549..319958,320135..320203,320348..320459,320537..320631,320693..320917))	Acanthamoeba castellanii str. Neff	14921502
ACA1_053790	CDS	ACA1_053790	NW_004457584.1	321022	325490	R	encoded by transcript ACA1_053790A; protein kinase domain containing protein	complement(join(321022..321445,321510..321590,321644..323652,323882..324064,324160..324230,324447..324522,324670..324763,325010..325120,325331..325365,325428..325490))	Acanthamoeba castellanii str. Neff	14921503
ACA1_053800	CDS	ACA1_053800	NW_004457584.1	325839	330236	R	encoded by transcript ACA1_053800A; Peroxin 5 (Pex5), putative	complement(join(325839..326079,326304..326437,326641..326738,326808..326992,327148..327248,327334..327731,327889..328060,328203..328378,328535..328614,328748..328898,329031..329136,329317..329444,329539..329635,329834..329917,330012..330095,330132..330236))	Acanthamoeba castellanii str. Neff	14921504
ACA1_053810	CDS	ACA1_053810	NW_004457584.1	329504	330236	R	encoded by transcript ACA1_053810A; uncharacterized protein	complement(join(329504..329635,329834..329917,330012..330095,330132..330236))	Acanthamoeba castellanii str. Neff	14921505
ACA1_053820	CDS	ACA1_053820	NW_004457584.1	330429	333003	D	encoded by transcript ACA1_053820A; Peroxin 14 (Pex14), putative	join(330429..331125,331282..331451,331542..331583,331809..331924,332081..332238,332326..332594,332797..333003)	Acanthamoeba castellanii str. Neff	14921506
ACA1_053830	CDS	ACA1_053830	NW_004457584.1	333086	333712	D	encoded by transcript ACA1_053830A; hyvh1 dual specificity phosphatase	join(333086..333219,333251..333307,333387..333545,333652..333712)	Acanthamoeba castellanii str. Neff	14921507
ACA1_053840	CDS	ACA1_053840	NW_004457584.1	333588	334353	R	encoded by transcript ACA1_053840A; uncharacterized protein	complement(join(333588..333963,334110..334160,334283..334353))	Acanthamoeba castellanii str. Neff	14921508
ACA1_053850	CDS	ACA1_053850	NW_004457584.1	334750	335761	D	encoded by transcript ACA1_053850A; ATP11 protein	join(334750..334939,335037..335121,335233..335465,335607..335761)	Acanthamoeba castellanii str. Neff	14921509
ACA1_053860	CDS	ACA1_053860	NW_004457584.1	336016	338219	R	encoded by transcript ACA1_053860A; IPT/TIG domain containing protein	complement(join(336016..336044,336162..336476,336630..336852,336996..338219))	Acanthamoeba castellanii str. Neff	14921510
ACA1_053870	CDS	ACA1_053870	NW_004457584.1	338524	340164	D	encoded by transcript ACA1_053870A; Peroxin 13 (Pex13), putative	join(338524..338656,338798..339691,339821..340056,340102..340164)	Acanthamoeba castellanii str. Neff	14921511
ACA1_053880	CDS	ACA1_053880	NW_004457584.1	340228	341853	R	encoded by transcript ACA1_053880A; cysteine desulfurase IscS, putative	complement(join(340228..341142,341279..341416,341551..341853))	Acanthamoeba castellanii str. Neff	14921512
ACA1_053890	CDS	ACA1_053890	NW_004457584.1	342049	345423	R	encoded by transcript ACA1_053890A; aconitate hydratase, mitochondrial, putative	complement(join(342049..342192,342309..342485,342588..342936,343029..343231,343334..343842,343926..344081,344208..344423,344551..344928,344997..345035,345111..345261,345379..345423))	Acanthamoeba castellanii str. Neff	14921513
ACA1_053900	CDS	ACA1_053900	NW_004457584.1	349329	350185	R	encoded by transcript ACA1_053900A; uncharacterized protein	complement(join(349329..349367,349450..349638,350147..350185))	Acanthamoeba castellanii str. Neff	14921514
ACA1_053910	CDS	ACA1_053910	NW_004457584.1	351655	355100	R	encoded by transcript ACA1_053910A; dihydroxy-acid dehydratase	complement(join(351655..351822,351920..352098,352236..352406,352497..352706,352797..352969,353051..353207,353323..353475,353611..353730,353814..353920,354010..354082,354223..354348,354462..354501,354620..354717,354857..355100))	Acanthamoeba castellanii str. Neff	14921515
ACA1_053920	CDS	ACA1_053920	NW_004457584.1	355213	356956	R	encoded by transcript ACA1_053920A; RNA methyltransferase, TrmH superfamily protein	complement(join(355213..355332,355364..355504,355622..355912,356019..356122,356245..356367,356497..356956))	Acanthamoeba castellanii str. Neff	14921516
ACA1_053930	CDS	ACA1_053930	NW_004457584.1	357067	357488	D	encoded by transcript ACA1_053930A; uncharacterized protein	join(357067..357202,357337..357488)	Acanthamoeba castellanii str. Neff	14921517
ACA1_053940	CDS	ACA1_053940	NW_004457584.1	357664	358661	R	encoded by transcript ACA1_053940A; Methyltransferase family protein 5, putative	complement(join(357664..357912,358014..358233,358317..358433,358564..358661))	Acanthamoeba castellanii str. Neff	14921518
ACA1_053950	CDS	ACA1_053950	NW_004457584.1	358731	360099	R	encoded by transcript ACA1_053950A; hydrolase, NUDIX domain containing protein	complement(join(358731..358867,359069..359130,359249..359279,359351..359446,359628..359683,359812..359893,359985..360099))	Acanthamoeba castellanii str. Neff	14921519
ACA1_053960	CDS	ACA1_053960	NW_004457584.1	360231	361371	R	encoded by transcript ACA1_053960A; Peroxin 11a (Pex11a), putative	complement(join(360231..360416,360552..360685,360815..360924,361025..361078,361196..361371))	Acanthamoeba castellanii str. Neff	14921520
ACA1_053970	CDS	ACA1_053970	NW_004457584.1	362175	363830	D	encoded by transcript ACA1_053970A; uncharacterized protein	join(362175..362647,362717..363830)	Acanthamoeba castellanii str. Neff	14921521
ACA1_053980	CDS	ACA1_053980	NW_004457584.1	363971	367167	R	encoded by transcript ACA1_053980A; uncharacterized protein	complement(join(363971..364259,364338..364471,364548..364839,365148..365521,365587..365747,365812..365920,366003..366139,366213..366389,366466..366584,366622..366833,366898..366971,367113..367167))	Acanthamoeba castellanii str. Neff	14921522
ACA1_053990	CDS	ACA1_053990	NW_004457584.1	367684	369186	R	encoded by transcript ACA1_053990A; uncharacterized protein	complement(join(367684..368037,368137..369186))	Acanthamoeba castellanii str. Neff	14921523
ACA1_054000	CDS	ACA1_054000	NW_004457584.1	369574	371215	D	encoded by transcript ACA1_054000A; uncharacterized protein	join(369574..369647,369784..369974,370043..370081,370161..370337,370427..370584,370689..370847,370922..371012,371109..371215)	Acanthamoeba castellanii str. Neff	14921524
ACA1_054010	CDS	ACA1_054010	NW_004457584.1	371366	372957	D	encoded by transcript ACA1_054010A; galactosyl transferase GMA12/MNN10 family protein	join(371366..371456,371536..371846,371981..372181,372285..372426,372509..372660,372751..372957)	Acanthamoeba castellanii str. Neff	14921525
ACA1_054020	CDS	ACA1_054020	NW_004457584.1	373033	375677	R	encoded by transcript ACA1_054020A; uncharacterized protein	complement(join(373033..373212,373360..373447,373554..373786,374144..374259,374380..374591,374746..374853,374929..375677))	Acanthamoeba castellanii str. Neff	14921526
ACA1_054030	CDS	ACA1_054030	NW_004457584.1	375757	377265	R	encoded by transcript ACA1_054030A; PH domain containing protein	complement(join(375757..376613,376737..376842,376926..377024,377155..377265))	Acanthamoeba castellanii str. Neff	14921527
ACA1_054040	CDS	ACA1_054040	NW_004457584.1	377596	381550	R	encoded by transcript ACA1_054040A; Fbox and MORN domain containing protein	complement(join(377596..377606,377678..377925,378033..378204,378299..378451,378542..378672,378769..378872,378966..379060,379161..379233,379362..379510,379669..379787,379946..380163,380257..380328,380474..380604,380800..381550))	Acanthamoeba castellanii str. Neff	14921528
ACA1_054060	CDS	ACA1_054060	NW_004457584.1	388046	391439	R	encoded by transcript ACA1_054060A; uncharacterized protein	complement(join(388046..388320,388385..388458,388492..388642,388748..388893,389018..389359,389815..389861,390071..390173,390271..390372,390451..390532,390599..390733,390841..390919,391031..391226,391351..391439))	Acanthamoeba castellanii str. Neff	14921530
ACA1_054070	CDS	ACA1_054070	NW_004457584.1	391543	392578	R	encoded by transcript ACA1_054070A; copii-coated vesicle membrane protein P24, putative	complement(join(391543..391704,391826..392106,392308..392388,392488..392578))	Acanthamoeba castellanii str. Neff	14921531
ACA1_054080	CDS	ACA1_054080	NW_004457584.1	394458	397205	R	encoded by transcript ACA1_054080A; uncharacterized protein	complement(join(394458..394601,394685..394816,394829..394987,395065..395126,395202..395339,395423..395677,395769..395996,396093..396155,396225..396404,396473..396602,396847..396962,397163..397205))	Acanthamoeba castellanii str. Neff	14921532
ACA1_054090	CDS	ACA1_054090	NW_004457584.1	398188	399828	R	encoded by transcript ACA1_054090A; Fbox domain containing protein	complement(join(398188..398387,398479..398586,398759..398813,398868..398950,399052..399129,399182..399329,399410..399508,399598..399828))	Acanthamoeba castellanii str. Neff	14921533
ACA1_054100	CDS	ACA1_054100	NW_004457584.1	401458	405275	D	encoded by transcript ACA1_054100A; diacylglycerol kinase, putative	join(401458..401527,401636..401841,401969..402089,402260..402312,402445..402841,402941..402984,403070..403192,403270..403430,403544..403676,404020..404200,404307..404394,404520..404694,404822..404956,405105..405275)	Acanthamoeba castellanii str. Neff	14921534
ACA1_054110	CDS	ACA1_054110	NW_004457584.1	405534	406834	D	encoded by transcript ACA1_054110A; Ras subfamily protein	join(405534..405591,405647..405767,405847..405892,405990..406092,406211..406393,406545..406834)	Acanthamoeba castellanii str. Neff	14921535
ACA1_054120	CDS	ACA1_054120	NW_004457584.1	406966	410925	R	encoded by transcript ACA1_054120A; protein kinase domain containing protein	complement(join(406966..407275,407420..407520,407585..408050,408149..408322,408422..408575,408689..408873,408952..409049,409147..409213,409291..409477,409558..409809,409924..410030,410135..410201,410368..410459,410750..410925))	Acanthamoeba castellanii str. Neff	14921536
ACA1_054130	CDS	ACA1_054130	NW_004457584.1	411171	412506	R	encoded by transcript ACA1_054130A; Peroxin 26 (Pex26), putative	complement(join(411171..411385,411677..411800,411891..412043,412189..412276,412343..412506))	Acanthamoeba castellanii str. Neff	14921537
ACA1_054140	CDS	ACA1_054140	NW_004457584.1	413482	414021	D	encoded by transcript ACA1_054140A; protozoan/cyanobacterial globin family subfamily protein	join(413482..413607,413659..414021)	Acanthamoeba castellanii str. Neff	14921538
ACA1_054150	CDS	ACA1_054150	NW_004457584.1	414102	414832	R	encoded by transcript ACA1_054150A; prolyl 4hydroxylase, alpha subunit	complement(join(414102..414381,414459..414832))	Acanthamoeba castellanii str. Neff	14921539
ACA1_054160	CDS	ACA1_054160	NW_004457584.1	414972	417104	R	encoded by transcript ACA1_054160A; uncharacterized protein	complement(414972..417104)	Acanthamoeba castellanii str. Neff	14921540
ACA1_054170	CDS	ACA1_054170	NW_004457584.1	418292	419148	R	encoded by transcript ACA1_054170A; MIP2A, putative	complement(join(418292..418387,418518..418603,418730..418794,418865..418953,419047..419148))	Acanthamoeba castellanii str. Neff	14921541
ACA1_054180	CDS	ACA1_054180	NW_004457584.1	419267	420247	D	encoded by transcript ACA1_054180A; uncharacterized protein	join(419267..419404,419582..419797,419955..420012,420096..420247)	Acanthamoeba castellanii str. Neff	14921542
ACA1_054190	CDS	ACA1_054190	NW_004457584.1	420540	421618	D	encoded by transcript ACA1_054190A; Rasrelated protein ralB-B, putative	join(420540..420658,420865..420938,421047..421174,421302..421409,421505..421618)	Acanthamoeba castellanii str. Neff	14921543
ACA1_054200	CDS	ACA1_054200	NW_004457584.1	422180	424188	D	encoded by transcript ACA1_054200A; Sadenosyl-L-homocysteine hydrolase, putative	join(422180..422612,422674..422795,422879..423103,423328..423712,423920..424188)	Acanthamoeba castellanii str. Neff	14921544
ACA1_054220	CDS	ACA1_054220	NW_004457584.1	431751	434313	R	encoded by transcript ACA1_054220A; MHCK/EF2 kinase domain containing protein	complement(join(431751..432200,432220..432869,432977..433256,433328..433499,433575..433735,433821..434028,434093..434183,434259..434313))	Acanthamoeba castellanii str. Neff	14921546
ACA1_054230	CDS	ACA1_054230	NW_004457584.1	437416	439551	D	encoded by transcript ACA1_054230A; CDPalcohol phosphatidyltransferase superfamily protein	join(437416..437519,437581..437652,437784..437846,437926..438013,438107..438178,438267..438373,438503..438703,438806..438886,438986..439091,439187..439262,439367..439551)	Acanthamoeba castellanii str. Neff	14921547
ACA1_054240	CDS	ACA1_054240	NW_004457584.1	439832	441042	D	encoded by transcript ACA1_054240A; EF hand domain containing protein	join(439832..440059,440145..440210,440288..440397,440487..440548,440638..440754,440843..441042)	Acanthamoeba castellanii str. Neff	14921548
ACA1_054250	CDS	ACA1_054250	NW_004457584.1	441424	444549	D	encoded by transcript ACA1_054250A; Frizzled/Smoothened family membrane region protein	join(441424..441594,441857..441986,442129..442242,442361..442401,442446..442527,442682..442828,442970..443071,443140..443252,443335..443392,443473..443562,443693..443754,443855..443992,444081..444248,444364..444549)	Acanthamoeba castellanii str. Neff	14921549
ACA1_054260	CDS	ACA1_054260	NW_004457584.1	445661	446049	R	encoded by transcript ACA1_054260A; uncharacterized protein	complement(join(445661..445841,446003..446049))	Acanthamoeba castellanii str. Neff	14921550
ACA1_054270	CDS	ACA1_054270	NW_004457584.1	446387	450530	R	encoded by transcript ACA1_054270A; alpha1,2-mannosidase subfamily protein	complement(join(446387..446512,446609..446680,446790..446918,447010..447081,447146..447198,447262..447356,447494..447639,447723..447805,447872..447933,448042..448151,448230..448291,448382..448709,448787..448857,448955..449017,449095..449265,449362..449450,449532..449670,449751..449796,449913..450048,450406..450530))	Acanthamoeba castellanii str. Neff	14921551
ACA1_054280	CDS	ACA1_054280	NW_004457584.1	450871	454524	R	encoded by transcript ACA1_054280A; uncharacterized protein	complement(join(450871..451685,451765..451872,451960..452097,452180..452266,452362..452439,452527..452601,452663..452743,452848..452919,452987..453058,453192..453269,453336..453416,453500..453604,453708..453782,453962..454062,454164..454305,454440..454524))	Acanthamoeba castellanii str. Neff	14921552
ACA1_054290	CDS	ACA1_054290	NW_004457584.1	454826	455116	D	encoded by transcript ACA1_054290A; uncharacterized protein	join(454826..454994,455079..455116)	Acanthamoeba castellanii str. Neff	14921553
ACA1_054300	CDS	ACA1_054300	NW_004457584.1	455627	457026	D	encoded by transcript ACA1_054300A; Ras subfamily protein	join(455627..455745,455934..456165,456262..456404,456500..456711,456794..457026)	Acanthamoeba castellanii str. Neff	14921554
ACA1_054310	CDS	ACA1_054310	NW_004457584.1	457078	461365	R	encoded by transcript ACA1_054310A; nitrate reductase, putative	complement(join(457078..457218,457289..457344,457443..457512,457675..457780,457866..457960,458030..458088,458168..458400,458463..458628,458748..458829,458960..459164,459247..459389,459462..459760,459868..459977,460076..460169,460253..460520,460625..461172,461257..461365))	Acanthamoeba castellanii str. Neff	14921555
ACA1_054320	CDS	ACA1_054320	NW_004457584.1	461777	468893	R	encoded by transcript ACA1_054320A; PremRNA processing splicing factor 8, putative	complement(join(461777..464773,464871..468893))	Acanthamoeba castellanii str. Neff	14921556
ACA1_054330	CDS	ACA1_054330	NW_004457584.1	469301	469890	R	encoded by transcript ACA1_054330A; hbxip, putative	complement(join(469301..469358,469504..469621,469675..469736,469838..469890))	Acanthamoeba castellanii str. Neff	14921557
ACA1_054340	CDS	ACA1_054340	NW_004457584.1	470421	471659	D	encoded by transcript ACA1_054340A; Eukaryotic initiation factor 4A, putative	470421..471659	Acanthamoeba castellanii str. Neff	14921558
ACA1_054350	CDS	ACA1_054350	NW_004457584.1	472041	472367	R	encoded by transcript ACA1_054350A; uncharacterized protein	complement(join(472041..472168,472238..472367))	Acanthamoeba castellanii str. Neff	14921559
ACA1_054360	CDS	ACA1_054360	NW_004457584.1	472561	474508	D	encoded by transcript ACA1_054360A; mannose6-phosphate isomerase, class I	join(472561..473019,473172..473282,473383..473705,473832..473898,473997..474080,474179..474508)	Acanthamoeba castellanii str. Neff	14921560
ACA1_054370	CDS	ACA1_054370	NW_004457584.1	474585	475644	R	encoded by transcript ACA1_054370A; prolyl 4hydroxylase, alpha subunit	complement(join(474585..474673,474778..474981,475068..475211,475300..475423,475510..475644))	Acanthamoeba castellanii str. Neff	14921561
ACA1_054380	CDS	ACA1_054380	NW_004457584.1	475979	478290	R	encoded by transcript ACA1_054380A; Histone-lysine N-methyltransferase	complement(join(475979..476314,476392..476529,476706..476879,476970..477109,477246..477583,477678..477869,477962..478290))	Acanthamoeba castellanii str. Neff	14921562
ACA1_054390	CDS	ACA1_054390	NW_004457584.1	478613	479696	D	encoded by transcript ACA1_054390A; DOMON domain containing protein	join(478613..478685,478757..478863,478936..479014,479095..479110,479129..479247,479309..479384,479468..479696)	Acanthamoeba castellanii str. Neff	14921563
ACA1_054400	CDS	ACA1_054400	NW_004457584.1	480076	481221	R	encoded by transcript ACA1_054400A; uncharacterized protein	complement(480076..481221)	Acanthamoeba castellanii str. Neff	14921564
ACA1_054410	CDS	ACA1_054410	NW_004457584.1	482333	488629	R	encoded by transcript ACA1_054410A; Dual specificity protein kinase	complement(join(482333..482555,482992..483069,483342..483425,483526..483649,483781..483892,484009..484120,484218..484395,484492..484552,484648..484718,484803..484923,485052..485193,485512..485781,485895..486004,486118..486260,486343..486444,486560..486656,486718..486836,486948..487799,487940..488072,488100..488117,488189..488330,488523..488629))	Acanthamoeba castellanii str. Neff	14921565
ACA1_054420	CDS	ACA1_054420	NW_004457584.1	488871	490863	D	encoded by transcript ACA1_054420A; N-formylglutamate amidohydrolase	join(488871..488905,489020..489089,489185..489284,489376..489612,489688..489822,489959..490058,490212..490308,490789..490863)	Acanthamoeba castellanii str. Neff	14921566
ACA1_054430	CDS	ACA1_054430	NW_004457584.1	491153	493149	R	encoded by transcript ACA1_054430A; SPFH domain / Band 7 domain containing protein	complement(join(491153..491412,491498..491996,492126..492230,492243..492338,492403..492561,492645..492841,492954..493149))	Acanthamoeba castellanii str. Neff	14921567
ACA1_054440	CDS	ACA1_054440	NW_004457584.1	493906	496752	R	encoded by transcript ACA1_054440A; uncharacterized protein	complement(join(493906..494231,494319..494403,494475..494614,494714..494884,495032..495123,495208..495265,495366..495474,495552..495717,495923..496000,496163..496275,496403..496470,496569..496634,496683..496752))	Acanthamoeba castellanii str. Neff	14921568
ACA1_054450	CDS	ACA1_054450	NW_004457584.1	496878	498343	D	encoded by transcript ACA1_054450A; uncharacterized protein	join(496878..496958,497052..497206,497292..497472,497781..497882,497979..498058,498141..498228,498299..498343)	Acanthamoeba castellanii str. Neff	14921569
ACA1_054460	CDS	ACA1_054460	NW_004457584.1	498883	501129	R	encoded by transcript ACA1_054460A; cytochrome b-like heme/steroid binding domain containing protein	complement(join(498883..499007,499089..499206,499228..499494,499574..499732,499825..500037,500138..500282,500389..500465,500689..501129))	Acanthamoeba castellanii str. Neff	14921570
ACA1_054470	CDS	ACA1_054470	NW_004457584.1	502777	508037	R	encoded by transcript ACA1_054470A; tetratricopeptide repeat domain containing protein	complement(join(502777..502916,503014..503225,503304..503394,503520..503592,503680..503795,503880..504222,504333..504456,504611..504735,504839..504926,505004..505137,505254..505302,505403..505448,505509..505549,505650..505711,505822..505933,506029..506146,506217..506303,506421..506504,506569..506922,506998..507483,507577..507623,507714..507931,508017..508037))	Acanthamoeba castellanii str. Neff	14921571
ACA1_054480	CDS	ACA1_054480	NW_004457584.1	508573	510219	D	encoded by transcript ACA1_054480A; Ribosephosphate pyrophosphokinase 3, mitochondrial, putative	join(508573..508737,508809..508980,509161..509184,509255..509366,509446..509533,509617..509797,509870..509980,510077..510219)	Acanthamoeba castellanii str. Neff	14921572
ACA1_054490	CDS	ACA1_054490	NW_004457584.1	510279	511413	R	encoded by transcript ACA1_054490A; phytol kinase 2, putative	complement(join(510279..510577,510671..510757,510867..510951,511037..511139,511271..511413))	Acanthamoeba castellanii str. Neff	14921573
ACA1_054500	CDS	ACA1_054500	NW_004457584.1	511532	515308	R	encoded by transcript ACA1_054500A; glycosyl hydrolase family 65 central catalytic domain containing protein	complement(join(511532..511723,511820..512009,512129..512319,512457..512582,512679..512810,512912..513039,513129..513222,513314..513494,513599..513762,513867..513963,514076..514335,514351..514381,514509..514578,514688..514798,514878..514938,515126..515308))	Acanthamoeba castellanii str. Neff	14921574
ACA1_054510	CDS	ACA1_054510	NW_004457584.1	515526	519013	R	encoded by transcript ACA1_054510A; GTPase of unknown function subfamily protein	complement(join(515526..515756,515875..516024,516139..516267,516356..516430,516794..517065,517161..517732,517820..517944,518064..518166,518263..518349,518433..518505,518632..518803,518909..519013))	Acanthamoeba castellanii str. Neff	14921575
ACA1_054520	CDS	ACA1_054520	NW_004457584.1	519379	524376	D	encoded by transcript ACA1_054520A; 5'nucleotidase, C-terminal domain containing protein	join(519379..519454,519541..519765,519850..519959,520027..520167,520370..520430,520513..520626,520702..520901,520983..521066,521148..521251,521325..521508,521649..521933,522020..522191,522257..522420,522544..522657,522745..522831,522897..523106,523224..523310,523414..523632,523742..523900,523985..524167,524263..524376)	Acanthamoeba castellanii str. Neff	14921576
ACA1_054530	CDS	ACA1_054530	NW_004457584.1	524999	527915	D	encoded by transcript ACA1_054530A; uncharacterized protein	join(524999..525116,525230..525396,525531..525689,525770..525845,525995..526101,526401..526477,526551..526650,526773..526953,527048..527134,527197..527426,527508..527615,527709..527915)	Acanthamoeba castellanii str. Neff	14921577
ACA1_054540	CDS	ACA1_054540	NW_004457584.1	528022	529269	R	encoded by transcript ACA1_054540A; Fbox domain containing protein	complement(join(528022..528390,528472..529269))	Acanthamoeba castellanii str. Neff	14921578
ACA1_054550	CDS	ACA1_054550	NW_004457584.1	529405	530221	R	encoded by transcript ACA1_054550A; uncharacterized protein	complement(join(529405..529482,529576..529761,529872..530006,530093..530221))	Acanthamoeba castellanii str. Neff	14921579
ACA1_054560	CDS	ACA1_054560	NW_004457584.1	530269	531494	R	encoded by transcript ACA1_054560A; uncharacterized protein	complement(join(530269..530484,530835..530968,531072..531172,531310..531494))	Acanthamoeba castellanii str. Neff	14921580
ACA1_054570	CDS	ACA1_054570	NW_004457584.1	531916	534389	R	encoded by transcript ACA1_054570A; protein kinase domain containing protein	complement(join(531916..532064,532187..532345,532464..532603,532679..532920,533063..533244,533627..533711,533787..533877,533946..534089,534211..534389))	Acanthamoeba castellanii str. Neff	14921581
ACA1_054580	CDS	ACA1_054580	NW_004457584.1	534617	535623	R	encoded by transcript ACA1_054580A; serine/threonine kinase	complement(join(534617..535288,535310..535490,535568..535623))	Acanthamoeba castellanii str. Neff	14921582
ACA1_054590	CDS	ACA1_054590	NW_004457584.1	536184	537323	R	encoded by transcript ACA1_054590A; uncharacterized protein	complement(536184..537323)	Acanthamoeba castellanii str. Neff	14921583
ACA1_054600	CDS	ACA1_054600	NW_004457584.1	538305	539599	R	encoded by transcript ACA1_054600A; uncharacterized protein	complement(join(538305..539367,539473..539484,539544..539599))	Acanthamoeba castellanii str. Neff	14921584
ACA1_054610	CDS	ACA1_054610	NW_004457584.1	540249	543102	D	encoded by transcript ACA1_054610A; Myotubularinrelated protein, putative	join(540249..540485,540572..540639,540754..540865,540932..541043,541138..541295,541416..541580,541656..541785,541886..542054,542139..542230,542307..542455,542577..542676,542802..542895,542994..543102)	Acanthamoeba castellanii str. Neff	14921585
ACA1_054620	CDS	ACA1_054620	NW_004457584.1	543139	545504	D	encoded by transcript ACA1_054620A; uncharacterized protein	join(543139..543302,543397..544353,544469..544627,544709..545504)	Acanthamoeba castellanii str. Neff	14921586
ACA1_054630	CDS	ACA1_054630	NW_004457584.1	545693	546765	D	encoded by transcript ACA1_054630A; Zinc finger RAD18 domain containing protein	join(545693..545847,545945..546059,546151..546233,546375..546535,546641..546765)	Acanthamoeba castellanii str. Neff	14921587
ACA1_054640	CDS	ACA1_054640	NW_004457584.1	546866	548863	R	encoded by transcript ACA1_054640A; SPFH domain / Band 7 domain containing protein	complement(join(546866..547161,547269..547443,547603..547884,548003..548107,548120..548374,548453..548863))	Acanthamoeba castellanii str. Neff	14921588
ACA1_054650	CDS	ACA1_054650	NW_004457584.1	549316	550219	D	encoded by transcript ACA1_054650A; glutathione transferase family protein	join(549316..549472,549616..549938,550043..550219)	Acanthamoeba castellanii str. Neff	14921589
ACA1_054660	CDS	ACA1_054660	NW_004457584.1	550270	551075	R	encoded by transcript ACA1_054660A; uncharacterized protein	complement(join(550270..550930,550996..551075))	Acanthamoeba castellanii str. Neff	14921590
ACA1_054670	CDS	ACA1_054670	NW_004457584.1	551541	552235	R	encoded by transcript ACA1_054670A; uncharacterized protein	complement(join(551541..552113,552191..552235))	Acanthamoeba castellanii str. Neff	14921591
ACA1_054680	CDS	ACA1_054680	NW_004457584.1	552740	553085	R	encoded by transcript ACA1_054680A; uncharacterized protein	complement(join(552740..552748,552759..553085))	Acanthamoeba castellanii str. Neff	14921592
ACA1_054690	CDS	ACA1_054690	NW_004457584.1	553547	557756	R	encoded by transcript ACA1_054690A; betaxylosidase	complement(join(553547..553606,553698..553795,553926..554078,554243..554336,554431..554579,554677..554818,554924..555051,555140..555205,555295..555403,555504..555620,555721..555863,555946..556067,556150..556271,556355..556456,556563..556637,556754..556843,556927..556989,557025..557159,557253..557354,557471..557548,557658..557756))	Acanthamoeba castellanii str. Neff	14921593
ACA1_054700	CDS	ACA1_054700	NW_004457584.1	558332	558872	R	encoded by transcript ACA1_054700A; Ras subfamily protein	complement(join(558332..558453,558568..558665,558808..558872))	Acanthamoeba castellanii str. Neff	14921594
ACA1_054710	CDS	ACA1_054710	NW_004457584.1	558907	559529	R	encoded by transcript ACA1_054710A; Ras family protein	complement(join(558907..559063,559162..559211,559296..559354,559409..559529))	Acanthamoeba castellanii str. Neff	14921595
ACA1_054720	CDS	ACA1_054720	NW_004457584.1	559713	560528	R	encoded by transcript ACA1_054720A; uncharacterized protein	complement(559713..>560528)	Acanthamoeba castellanii str. Neff	14921596
ACA1_054730	CDS	ACA1_054730	NW_004457584.1	560661	562852	R	encoded by transcript ACA1_054730A; DNA polymerase kappa, putative	complement(join(560661..560910,560982..561139,561255..561377,561570..561711,561808..561958,562063..562112,562218..562405,562523..562852))	Acanthamoeba castellanii str. Neff	14921597
ACA1_054740	CDS	ACA1_054740	NW_004457584.1	563018	563940	D	encoded by transcript ACA1_054740A; uncharacterized protein	join(563018..563179,563288..563410,563485..563568,563684..563770,563857..563940)	Acanthamoeba castellanii str. Neff	14921598
ACA1_054750	CDS	ACA1_054750	NW_004457584.1	564008	565444	R	encoded by transcript ACA1_054750A; Olinked GlcNAc transferase-like protein	complement(join(564008..564163,564250..564354,564440..564521,564592..564740,564870..565013,565088..565152,565252..565444))	Acanthamoeba castellanii str. Neff	14921599
ACA1_054760	CDS	ACA1_054760	NW_004457584.1	565866	567384	D	encoded by transcript ACA1_054760A; Ras family protein	join(565866..565896,565976..566071,566180..566232,566456..566528,566638..566681,566751..566825,566911..567019,567122..567240,567325..567384)	Acanthamoeba castellanii str. Neff	14921600
ACA1_054770	CDS	ACA1_054770	NW_004457584.1	567620	569943	D	encoded by transcript ACA1_054770A; glycosyl transferase, putative	join(567620..567701,567731..568089,568166..568237,568287..568406,568568..568663,568736..568807,568874..568973,569038..569212,569306..569433,569511..569572,569656..569823,569890..569943)	Acanthamoeba castellanii str. Neff	14921601
ACA1_054780	CDS	ACA1_054780	NW_004457584.1	570301	571425	R	encoded by transcript ACA1_054780A; zinc finger domain containing protein	complement(join(570301..570438,570515..570655,570799..570874,570974..571083,571167..571185,571283..571425))	Acanthamoeba castellanii str. Neff	14921602
ACA1_054790	CDS	ACA1_054790	NW_004457584.1	571750	574402	R	encoded by transcript ACA1_054790A; transporter, major facilitator subfamily protein	complement(join(571750..571848,571953..572032,572128..572236,572333..572446,572589..572725,572810..573034,573104..573277,573360..573428,573505..573613,573723..573817,573895..574009,574148..574281,574378..574402))	Acanthamoeba castellanii str. Neff	14921603
ACA1_054800	CDS	ACA1_054800	NW_004457584.1	574771	576048	R	encoded by transcript ACA1_054800A; GATA zinc finger domain containing protein	complement(join(574771..575169,575311..576048))	Acanthamoeba castellanii str. Neff	14921604
ACA1_054810	CDS	ACA1_054810	NW_004457584.1	577022	578274	D	encoded by transcript ACA1_054810A; GATA zinc finger domain containing protein	join(577022..577741,578089..578274)	Acanthamoeba castellanii str. Neff	14921605
ACA1_054820	CDS	ACA1_054820	NW_004457584.1	578326	585643	R	encoded by transcript ACA1_054820A; tetratricopeptide repeat domain containing protein	complement(join(578326..578519,578624..578691,578768..578865,578943..579022,579109..579274,579352..579859,579955..580061,580184..580257,580367..580452,580577..580655,580774..580901,581004..581068,581182..581269,581364..581453,581543..581622,581712..581806,581994..582117,582208..582336,582440..582628,582738..582842,582921..583016,583110..583195,583257..583336,583440..583483,583565..583663,583775..583935,584040..584122,584206..584335,584418..584445,584530..584622,584719..584842,584938..585013,585109..585155,585268..585325,585432..585475,585561..585643))	Acanthamoeba castellanii str. Neff	14921606
ACA1_054830	CDS	ACA1_054830	NW_004457584.1	585862	588690	D	encoded by transcript ACA1_054830A; uncharacterized protein	join(585862..585969,586052..586720,586800..587271,587354..587523,587617..588041,588180..588690)	Acanthamoeba castellanii str. Neff	14921607
ACA1_054840	CDS	ACA1_054840	NW_004457584.1	588723	591345	R	encoded by transcript ACA1_054840A; cytochrome p450 superfamily protein	complement(join(588723..588856,588951..589085,589185..589274,589345..589426,589507..589683,589809..589984,590064..590145,590236..590291,590367..590487,590597..590682,590755..590861,590949..591039,591125..591203,591286..591345))	Acanthamoeba castellanii str. Neff	14921608
ACA1_054850	CDS	ACA1_054850	NW_004457584.1	591432	592277	R	encoded by transcript ACA1_054850A; universal stress domain containing protein (UspA)	complement(join(591432..591501,591623..591747,591852..591985,592109..592277))	Acanthamoeba castellanii str. Neff	14921609
ACA1_054860	CDS	ACA1_054860	NW_004457584.1	592442	593854	D	encoded by transcript ACA1_054860A; uncharacterized protein	join(592442..593116,593236..593314,593391..593854)	Acanthamoeba castellanii str. Neff	14921610
ACA1_054870	CDS	ACA1_054870	NW_004457584.1	593881	595103	R	encoded by transcript ACA1_054870A; transporter, major intrinsic protein (MIP) superfamily protein	complement(join(593881..593945,594050..594234,594318..594546,594672..594830,594941..595103))	Acanthamoeba castellanii str. Neff	14921611
ACA1_054880	CDS	ACA1_054880	NW_004457584.1	596318	597797	D	encoded by transcript ACA1_054880A; uncharacterized protein	join(596318..596802,596888..596981,597056..597135,597264..597378,597483..597797)	Acanthamoeba castellanii str. Neff	14921612
ACA1_054890	CDS	ACA1_054890	NW_004457584.1	597840	603282	R	encoded by transcript ACA1_054890A; leucine rich repeat-containing protein	complement(join(597840..598046,598189..598431,598568..598657,598733..598799,598886..599006,599118..599271,599380..599530,599596..599834,599961..600073,600162..601700,601773..602853,602947..603094,603176..603282))	Acanthamoeba castellanii str. Neff	14921613
ACA1_054900	CDS	ACA1_054900	NW_004457584.1	603532	604114	D	encoded by transcript ACA1_054900A; uncharacterized protein	join(603532..603607,603685..603743,603818..604114)	Acanthamoeba castellanii str. Neff	14921614
ACA1_054910	CDS	ACA1_054910	NW_004457584.1	604144	604921	R	encoded by transcript ACA1_054910A; acetyltransferase	complement(join(604144..604245,604337..604471,604544..604639,604727..604921))	Acanthamoeba castellanii str. Neff	14921615
ACA1_054920	CDS	ACA1_054920	NW_004457584.1	605035	605979	R	encoded by transcript ACA1_054920A; aldehyde reductase	complement(605035..605979)	Acanthamoeba castellanii str. Neff	14921616
ACA1_054930	CDS	ACA1_054930	NW_004457584.1	606210	607943	D	encoded by transcript ACA1_054930A; zinc finger, zz type domain containing protein	join(606210..606275,606377..606457,606512..606588,606673..606933,606995..607125,607208..607301,607385..607466,607532..607614,607676..607745,607848..607943)	Acanthamoeba castellanii str. Neff	14921617
ACA1_054940	CDS	ACA1_054940	NW_004457584.1	608251	608803	D	encoded by transcript ACA1_054940A; histone h3, putative	join(608251..608488,608604..608670,608743..608803)	Acanthamoeba castellanii str. Neff	14921618
ACA1_054950	CDS	ACA1_054950	NW_004457584.1	609541	613419	D	encoded by transcript ACA1_054950A; uncharacterized protein	join(609541..610659,610731..610883,611056..611145,611246..611393,611464..611934,612002..612439,612461..612821,612974..613245,613327..613387,613401..613419)	Acanthamoeba castellanii str. Neff	14921619
ACA1_054960	CDS	ACA1_054960	NW_004457584.1	613448	613675	R	encoded by transcript ACA1_054960A; uncharacterized protein	complement(613448..613675)	Acanthamoeba castellanii str. Neff	14921620
ACA1_054970	CDS	ACA1_054970	NW_004457584.1	614218	616572	R	encoded by transcript ACA1_054970A; uncharacterized protein	complement(join(614218..614295,614391..614561,614633..615135,615227..615351,615466..615590,615681..615862,615947..616119,616211..>616572))	Acanthamoeba castellanii str. Neff	14921621
ACA1_054980	CDS	ACA1_054980	NW_004457584.1	617139	620017	D	encoded by transcript ACA1_054980A; leucine rich repeat domain containing protein	join(617139..617291,617389..617950,618016..618101,618164..618292,618360..618494,618578..618646,618737..619370,619452..619537,619616..619736,619824..620017)	Acanthamoeba castellanii str. Neff	14921622
ACA1_054990	CDS	ACA1_054990	NW_004457584.1	620377	622461	D	encoded by transcript ACA1_054990A; uncharacterized protein	join(620377..620419,620518..620603,620695..620770,620858..621037,621170..621267,621392..621461,621553..621609,621704..621946,622114..622215,622298..622348,622424..622461)	Acanthamoeba castellanii str. Neff	14921623
ACA1_055000	CDS	ACA1_055000	NW_004457584.1	622799	625214	D	encoded by transcript ACA1_055000A; I/LWEQ domain containing protein	join(622799..623107,623228..623652,623723..623838,623934..624484,624574..624850,624943..625214)	Acanthamoeba castellanii str. Neff	14921624
ACA1_055010	CDS	ACA1_055010	NW_004457584.1	625972	629338	D	encoded by transcript ACA1_055010A; kinesin motor domain containing protein	join(625972..626034,626260..626362,626453..626526,626718..626898,627047..627328,627458..627602,627707..627802,627888..627987,628107..628638,628826..629004,629111..629338)	Acanthamoeba castellanii str. Neff	14921625
ACA1_055020	CDS	ACA1_055020	NW_004457584.1	629478	629933	D	encoded by transcript ACA1_055020A; uncharacterized protein	629478..629933	Acanthamoeba castellanii str. Neff	14921626
ACA1_055030	CDS	ACA1_055030	NW_004457584.1	630009	637151	R	encoded by transcript ACA1_055030A; leucine rich repeat domain containing protein	complement(join(630009..630701,630799..630911,631050..631134,631214..631296,631399..631547,631631..631685,631793..631891,632045..632165,632279..632419,632544..632611,632693..632737,632815..632884,633004..633073,633153..633322,633431..633541,633673..633770,633865..634003,634095..634171,634266..634355,634440..634552,634641..635059,635162..635279,635371..635445,635522..635815,636244..636439,636586..636618,636724..636814,636993..637151))	Acanthamoeba castellanii str. Neff	14921627
ACA1_055040	CDS	ACA1_055040	NW_004457584.1	638262	640010	R	encoded by transcript ACA1_055040A; uncharacterized protein	complement(638262..640010)	Acanthamoeba castellanii str. Neff	14921628
ACA1_055050	CDS	ACA1_055050	NW_004457584.1	640391	641960	D	encoded by transcript ACA1_055050A; SH3 domain containing protein	join(640391..640473,640553..640790,640890..640926,641001..641714,641812..641960)	Acanthamoeba castellanii str. Neff	14921629
ACA1_055060	CDS	ACA1_055060	NW_004457584.1	642378	647121	D	encoded by transcript ACA1_055060A; formin domain containing protein	join(642378..642581,642706..642895,642979..643069,643204..643273,643374..643513,643624..643918,644097..644206,644295..644371,644460..644857,644945..645017,645602..645628,646275..646387,646473..646629,646717..646869,646942..647069,647095..647121)	Acanthamoeba castellanii str. Neff	14921630
ACA1_055270	CDS	ACA1_055270	NW_004457584.1	668909	670133	D	encoded by transcript ACA1_055270A; formin domain containing protein	join(668909..669067,669158..669290,669347..669633,669725..669849,669947..670133)	Acanthamoeba castellanii str. Neff	14921631
ACA1_055280	CDS	ACA1_055280	NW_004457584.1	670461	671534	D	encoded by transcript ACA1_055280A; PH domain containing protein	join(670461..670514,670586..670768,670880..670969,671055..671534)	Acanthamoeba castellanii str. Neff	14921632
ACA1_055290	CDS	ACA1_055290	NW_004457584.1	671655	674251	R	encoded by transcript ACA1_055290A; Sec7 domain containing protein	complement(join(671655..671825,671848..671918,672053..672455,672536..672657,672763..673002,673099..673214,673336..673416,673525..673643,673796..674251))	Acanthamoeba castellanii str. Neff	14921633
ACA1_055300	CDS	ACA1_055300	NW_004457584.1	675229	676190	R	encoded by transcript ACA1_055300A; uncharacterized protein	complement(join(675229..675431,675473..675723,675841..676190))	Acanthamoeba castellanii str. Neff	14921634
ACA1_055310	CDS	ACA1_055310	NW_004457584.1	676361	677667	D	encoded by transcript ACA1_055310A; uncharacterized protein	join(676361..676641,676704..676813,676900..677031,677108..677289,677407..677667)	Acanthamoeba castellanii str. Neff	14921635
ACA1_055320	CDS	ACA1_055320	NW_004457584.1	678005	678283	D	encoded by transcript ACA1_055320A; uncharacterized protein	678005..678283	Acanthamoeba castellanii str. Neff	14921636
ACA1_055330	CDS	ACA1_055330	NW_004457584.1	678637	682014	D	encoded by transcript ACA1_055330A; uncharacterized protein	join(678637..678666,678765..678881,679053..679218,679299..679657,679739..679852,679914..680418,680479..681163,681239..681468,681530..681662,681720..681768,681841..681915,681988..682014)	Acanthamoeba castellanii str. Neff	14921637
ACA1_055340	CDS	ACA1_055340	NW_004457584.1	682264	687767	D	encoded by transcript ACA1_055340A; autophagy related protein 2 (ATG2), putative	join(682264..682401,682475..682555,682630..683061,683154..683275,683385..683487,683552..683749,683826..684152,684231..684281,684357..684498,684565..685359,685440..685554,685640..685880,685976..686288,686356..686475,686540..686767,686855..686980,687053..687235,687292..687767)	Acanthamoeba castellanii str. Neff	14921638
ACA1_055350	CDS	ACA1_055350	NW_004457584.1	687941	688544	D	encoded by transcript ACA1_055350A; uncharacterized protein	join(687941..688097,688174..688544)	Acanthamoeba castellanii str. Neff	14921639
ACA1_055360	CDS	ACA1_055360	NW_004457584.1	688756	689033	D	encoded by transcript ACA1_055360A; uncharacterized protein	join(688756..688917,688950..689033)	Acanthamoeba castellanii str. Neff	14921640
ACA1_055370	CDS	ACA1_055370	NW_004457584.1	690763	691366	R	encoded by transcript ACA1_055370A; uncharacterized protein	complement(join(690763..691133,691210..691366))	Acanthamoeba castellanii str. Neff	14921641
ACA1_055380	CDS	ACA1_055380	NW_004457584.1	691536	692232	R	encoded by transcript ACA1_055380A; uncharacterized protein	complement(join(691536..691781,691897..692000,692065..692182,692212..692232))	Acanthamoeba castellanii str. Neff	14921642
ACA1_055390	CDS	ACA1_055390	NW_004457584.1	692931	695365	R	encoded by transcript ACA1_055390A; uncharacterized protein	complement(join(692931..693091,693206..693225,693302..693398,693472..693584,693666..694126,694209..694337,694412..694658,694732..694862,694936..695237,695308..695365))	Acanthamoeba castellanii str. Neff	14921643
ACA1_055400	CDS	ACA1_055400	NW_004457584.1	696109	697177	R	encoded by transcript ACA1_055400A; uncharacterized protein	complement(join(696109..696198,696271..696379,696471..696596,696658..696776,696848..696940,697037..697177))	Acanthamoeba castellanii str. Neff	14921644
ACA1_055410	CDS	ACA1_055410	NW_004457584.1	697620	700761	D	encoded by transcript ACA1_055410A; His Kinase A (phosphoacceptor) domain containing protein	join(697620..697772,697989..698542,698589..698739,698860..699015,699087..699317,699463..699600,699678..699765,699867..700372,700469..700576,700681..700761)	Acanthamoeba castellanii str. Neff	14921645
ACA1_055420	CDS	ACA1_055420	NW_004457584.1	700798	701434	R	encoded by transcript ACA1_055420A; TspO/MBR family protein	complement(join(700798..701205,701282..701434))	Acanthamoeba castellanii str. Neff	14921646
ACA1_055430	CDS	ACA1_055430	NW_004457584.1	701916	704504	D	encoded by transcript ACA1_055430A; N2,N2dimethylguanosine tRNA methyltransferase	join(701916..702096,702239..702301,702390..702650,702725..702817,702898..703066,703219..703309,703398..703532,703614..703699,703787..703894,703969..704083,704204..704286,704387..704504)	Acanthamoeba castellanii str. Neff	14921647
ACA1_055440	CDS	ACA1_055440	NW_004457584.1	704675	707204	D	encoded by transcript ACA1_055440A; calponin domain containing protein	join(704675..704806,704875..704951,705080..705251,705339..705425,705544..705787,705893..706146,706281..706412,706524..706838,707046..707204)	Acanthamoeba castellanii str. Neff	14921648
ACA1_055450	CDS	ACA1_055450	NW_004457584.1	707522	708855	D	encoded by transcript ACA1_055450A; uncharacterized protein	join(707522..707544,707613..707727,707836..707896,707966..708076,708158..708264,708349..708855)	Acanthamoeba castellanii str. Neff	14921649
ACA1_055460	CDS	ACA1_055460	NW_004457584.1	708960	709679	D	encoded by transcript ACA1_055460A; TspO/MBR family protein	join(708960..709029,709060..709121,709257..709679)	Acanthamoeba castellanii str. Neff	14921650
ACA1_055470	CDS	ACA1_055470	NW_004457584.1	709849	711478	D	encoded by transcript ACA1_055470A; YeeE/YedE family protein	join(709849..710028,710096..710151,710243..710384,710447..710502,710570..710910,711000..711222,711316..711478)	Acanthamoeba castellanii str. Neff	14921651
ACA1_055480	CDS	ACA1_055480	NW_004457584.1	711542	715775	R	encoded by transcript ACA1_055480A; HEAT repeat domain containing protein	complement(join(711542..712113,712242..712392,712474..712581,712693..712814,712895..713135,713198..713410,713506..713620,713722..713854,713972..714150,714237..714337,714711..714842,714923..714972,715061..715177,715232..715775))	Acanthamoeba castellanii str. Neff	14921652
ACA1_055490	CDS	ACA1_055490	NW_004457584.1	715886	717801	D	encoded by transcript ACA1_055490A; ThiF domain containing protein	join(715886..716041,716153..716332,716494..716632,716774..716947,717078..717266,717366..717535,717625..717801)	Acanthamoeba castellanii str. Neff	14921653
ACA1_055500	CDS	ACA1_055500	NW_004457584.1	717900	719457	R	encoded by transcript ACA1_055500A; uncharacterized protein	complement(join(717900..718232,718322..718437,718503..718621,718693..718792,718860..718986,719083..719457))	Acanthamoeba castellanii str. Neff	14921654
ACA1_055510	CDS	ACA1_055510	NW_004457584.1	719845	722568	R	encoded by transcript ACA1_055510A; Lsorbosone dehydrogenase	complement(join(719845..719858,719949..720022,720125..720203,720291..720433,720525..720625,720876..720987,721081..721161,721260..721350,721443..721561,721624..721767,721843..721898,722069..722123,722235..722343,722502..722568))	Acanthamoeba castellanii str. Neff	14921655
ACA1_055520	CDS	ACA1_055520	NW_004457584.1	722706	724697	R	encoded by transcript ACA1_055520A; nucleoporin, putative	complement(join(722706..722920,723030..723107,723204..723256,723364..723459,723537..723574,723645..723736,723830..723983,724049..724071,724173..724266,724370..724483,724572..724697))	Acanthamoeba castellanii str. Neff	14921656
ACA1_055530	CDS	ACA1_055530	NW_004457584.1	724885	725235	D	encoded by transcript ACA1_055530A; uncharacterized protein	724885..725235	Acanthamoeba castellanii str. Neff	14921657
ACA1_055540	CDS	ACA1_055540	NW_004457584.1	725498	727042	R	encoded by transcript ACA1_055540A; aspartate aminotransferase	complement(join(725498..725600,725720..725806,725919..726423,726502..727042))	Acanthamoeba castellanii str. Neff	14921658
ACA1_055550	CDS	ACA1_055550	NW_004457584.1	727440	728335	R	encoded by transcript ACA1_055550A; uncharacterized protein	complement(join(727440..728260,728329..728335))	Acanthamoeba castellanii str. Neff	14921659
ACA1_055560	CDS	ACA1_055560	NW_004457584.1	728697	729139	R	encoded by transcript ACA1_055560A; protein C16orf58 family protein	complement(join(728697..728707,728781..728891,728956..729139))	Acanthamoeba castellanii str. Neff	14921660
ACA1_055570	CDS	ACA1_055570	NW_004457584.1	729942	731490	R	encoded by transcript ACA1_055570A; uncharacterized protein	complement(join(729942..730177,730264..730848,730937..731044,731169..731187,731255..731339,731424..731437,731476..731490))	Acanthamoeba castellanii str. Neff	14921661
ACA1_055580	CDS	ACA1_055580	NW_004457584.1	734444	738062	D	encoded by transcript ACA1_055580A; RasGEF domain containing protein	join(734444..734676,734781..735468,735581..735686,735892..735973,736062..736142,736243..736293,736386..736719,736813..736886,737017..737185,737337..737411,737524..737657,737739..737841,737931..738062)	Acanthamoeba castellanii str. Neff	14921662
ACA1_055590	CDS	ACA1_055590	NW_004457584.1	738158	739418	R	encoded by transcript ACA1_055590A; dual specificity phosphatase, putative	complement(join(738158..738193,738250..738374,738455..738615,738704..738780,738866..738948,739078..739242,739340..739418))	Acanthamoeba castellanii str. Neff	14921663
ACA1_055600	CDS	ACA1_055600	NW_004457584.1	739572	742507	R	encoded by transcript ACA1_055600A; RhoGEF domain containing protein	complement(join(739572..739621,739725..739856,739927..740124,740192..740281,740353..740497,740724..740816,740913..741005,741094..741210,741302..741370,741449..742507))	Acanthamoeba castellanii str. Neff	14921664
ACA1_055610	CDS	ACA1_055610	NW_004457584.1	743059	743951	R	encoded by transcript ACA1_055610A; oxidoreductase, short chain dehydrogenase/reductase superfamily protein	complement(join(743059..743390,743486..743951))	Acanthamoeba castellanii str. Neff	14921665
ACA1_055620	CDS	ACA1_055620	NW_004457584.1	744144	751139	R	encoded by transcript ACA1_055620A; GTPase activating protein Sar1, putative	complement(join(744144..744313,744414..744643,744740..744843,744932..745003,745085..745254,745353..745811,745887..745991,746096..746219,746328..746498,746610..746696,746809..746977,747077..747182,747284..747383,747457..747556,747658..747752,747829..747918,748014..748094,748206..748444,748620..748758,748897..749154,749261..749390,749485..749629,749705..749813,749926..750019,750114..750199,750300..751139))	Acanthamoeba castellanii str. Neff	14921666
ACA1_055630	CDS	ACA1_055630	NW_004457584.1	751744	754940	R	encoded by transcript ACA1_055630A; tetratricopeptide repeat domain containing protein	complement(join(751744..752126,752193..752295,752359..752445,752513..752572,752694..752765,752843..753094,753487..753570,753672..754444,754516..754647,754859..754940))	Acanthamoeba castellanii str. Neff	14921667
ACA1_055640	CDS	ACA1_055640	NW_004457584.1	755569	764362	D	encoded by transcript ACA1_055640A; tetratricopeptide repeat-containing protein	join(755569..756375,756500..756639,756722..756853,756945..757025,757120..757243,757334..757441,757534..757656,757764..758077,758147..758331,758414..758745,758828..758920,758991..759140,759235..759323,759402..759550,759643..759818,759894..760067,760134..760248,760330..761813,761921..764362)	Acanthamoeba castellanii str. Neff	14921668
ACA1_055650	CDS	ACA1_055650	NW_004457584.1	764561	766564	D	encoded by transcript ACA1_055650A; lipoyl synthase	join(764561..764653,764724..764974,765076..765196,765319..765404,765552..765650,765725..765894,766000..766124,766205..766325,766383..766564)	Acanthamoeba castellanii str. Neff	14921669
ACA1_055660	CDS	ACA1_055660	NW_004457584.1	766698	767928	D	encoded by transcript ACA1_055660A; lipoyl(octanoyl) transferase	join(766698..766745,766854..766965,767042..767203,767262..767329,767462..767567,767642..767715,767776..767928)	Acanthamoeba castellanii str. Neff	14921670
ACA1_055670	CDS	ACA1_055670	NW_004457584.1	768113	768930	D	encoded by transcript ACA1_055670A; glutathione S-transferase, C-terminal domain containing protein	join(768113..768269,768338..768660,768751..768930)	Acanthamoeba castellanii str. Neff	14921671
ACA1_055680	CDS	ACA1_055680	NW_004457584.1	768977	769479	R	encoded by transcript ACA1_055680A; uncharacterized protein	complement(join(768977..768987,769008..769479))	Acanthamoeba castellanii str. Neff	14921672
ACA1_055790	CDS	ACA1_055790	NW_004457584.1	770022	771247	D	encoded by transcript ACA1_055790A; uncharacterized protein	join(770022..770250,770482..770578,770589..770624,770668..770803,770899..771015,771122..771247)	Acanthamoeba castellanii str. Neff	14921673
ACA1_055800	CDS	ACA1_055800	NW_004457584.1	771659	773065	D	encoded by transcript ACA1_055800A; glutathione transferase family protein	join(771659..771833,771918..771988,772009..772091,772261..772400,772469..772791,772886..773065)	Acanthamoeba castellanii str. Neff	14921674
ACA1_055810	CDS	ACA1_055810	NW_004457584.1	773199	773617	R	encoded by transcript ACA1_055810A; uncharacterized protein	complement(join(773199..773396,773456..773617))	Acanthamoeba castellanii str. Neff	14921675
ACA1_055820	CDS	ACA1_055820	NW_004457584.1	773909	776001	D	encoded by transcript ACA1_055820A; PHD-finger domain containing protein	join(773909..774307,774410..774505,774642..774725,774834..774968,775093..775217,775306..775435,775522..776001)	Acanthamoeba castellanii str. Neff	14921676
ACA1_055830	CDS	ACA1_055830	NW_004457584.1	776059	778833	R	encoded by transcript ACA1_055830A; cell surface protein	complement(join(776059..776818,776926..777073,777150..777252,777329..777371,777445..777614,777701..777808,777940..778209,778274..778374,778473..778612,778742..778833))	Acanthamoeba castellanii str. Neff	14921677
ACA1_055840	CDS	ACA1_055840	NW_004457584.1	779271	780726	D	encoded by transcript ACA1_055840A; uncharacterized protein	join(779271..779697,779826..779875,780211..780289,780343..780453,780573..780596,780689..780726)	Acanthamoeba castellanii str. Neff	14921678
ACA1_055950	CDS	ACA1_055950	NW_004457584.1	785308	791689	D	encoded by transcript ACA1_055950A; serine/threonine protein kinase	join(785308..785386,785473..785572,785665..785725,785914..786051,786130..786435,786538..786851,786942..787291,787383..787624,787752..787856,787959..788094,788169..788564,788661..788923,788996..789077,789149..789183,789304..789400,789519..789570,789655..789867,789897..790661,790690..790994,791092..791351,791390..791689)	Acanthamoeba castellanii str. Neff	14921679
ACA1_055960	CDS	ACA1_055960	NW_004457584.1	792291	792630	D	encoded by transcript ACA1_055960A; uncharacterized protein	join(792291..792462,792503..792630)	Acanthamoeba castellanii str. Neff	14921680
ACA1_055970	CDS	ACA1_055970	NW_004457584.1	792676	794213	R	encoded by transcript ACA1_055970A; chaperone protein dnak, putative	complement(join(792676..792713,792794..792923,792988..793534,793638..793752,793832..793933,794000..794213))	Acanthamoeba castellanii str. Neff	14921681
ACA1_055980	CDS	ACA1_055980	NW_004457584.1	795074	795655	D	encoded by transcript ACA1_055980A; uncharacterized protein	join(795074..795118,795179..795298,795389..795655)	Acanthamoeba castellanii str. Neff	14921682
ACA1_055990	CDS	ACA1_055990	NW_004457584.1	796226	797224	D	encoded by transcript ACA1_055990A; NmrA family protein	join(796226..796590,796663..797224)	Acanthamoeba castellanii str. Neff	14921683
ACA1_098380	CDS	ACA1_098380	NW_004457582.1	217	816	R	encoded by transcript ACA1_098380A; uncharacterized protein	complement(join(<217..686,747..816))	Acanthamoeba castellanii str. Neff	14921391
ACA1_098390	CDS	ACA1_098390	NW_004457582.1	1189	2525	R	encoded by transcript ACA1_098390A; methyltransferase, putative	complement(join(1189..1589,1687..1790,1912..2011,2085..2263,2334..2383,2490..2525))	Acanthamoeba castellanii str. Neff	14921364
ACA1_098400	CDS	ACA1_098400	NW_004457582.1	2865	3391	D	encoded by transcript ACA1_098400A; permease (major facilitator superfamily) protein	join(2865..3005,3125..3198,3271..3391)	Acanthamoeba castellanii str. Neff	14921365
ACA1_098410	CDS	ACA1_098410	NW_004457582.1	3451	5062	D	encoded by transcript ACA1_098410A; permease (Major facilitator superfamily) protein, putative	join(3451..3628,3738..3890,3966..4160,4237..4404,4456..4529,4543..4552,4671..4754,4847..4912,5001..5062)	Acanthamoeba castellanii str. Neff	14921355
ACA1_098420	CDS	ACA1_098420	NW_004457582.1	5634	7999	D	encoded by transcript ACA1_098420A; ammonium transporter subfamily protein	join(5634..5886,6318..6425,6513..6686,6799..6994,7109..7542,7677..7999)	Acanthamoeba castellanii str. Neff	14921353
ACA1_098430	CDS	ACA1_098430	NW_004457582.1	8353	11655	D	encoded by transcript ACA1_098430A; uncharacterized protein	join(8353..8921,9107..9224,9347..9457,9512..9577,9742..9894,9961..10044,10136..10321,10434..10641,10761..11089,11179..11354,11436..11655)	Acanthamoeba castellanii str. Neff	14921354
ACA1_098450	CDS	ACA1_098450	NW_004457582.1	15602	16566	R	encoded by transcript ACA1_098450A; oxidoreductase, short chain dehydrogenase/reductase superfamily protein	complement(join(15602..15915,16010..16448,16537..16566))	Acanthamoeba castellanii str. Neff	14921357
ACA1_098460	CDS	ACA1_098460	NW_004457582.1	17125	19404	D	encoded by transcript ACA1_098460A; metallophosphoesterase	join(17125..17679,17759..17857,17943..18093,18177..18310,18474..18567,18641..18901,18971..19044,19148..19203,19323..19404)	Acanthamoeba castellanii str. Neff	14921358
ACA1_098570	CDS	ACA1_098570	NW_004457582.1	20247	20576	D	encoded by transcript ACA1_098570A; uncharacterized protein	20247..20576	Acanthamoeba castellanii str. Neff	14921359
ACA1_098680	CDS	ACA1_098680	NW_004457582.1	21125	22314	R	encoded by transcript ACA1_098680A; transporter, major intrinsic protein (MIP) superfamily protein	complement(join(21125..21186,21318..21502,21601..21829,21911..22054,22146..22314))	Acanthamoeba castellanii str. Neff	14921360
ACA1_098690	CDS	ACA1_098690	NW_004457582.1	22665	27909	R	encoded by transcript ACA1_098690A; RasGEF domain containing protein	complement(join(22665..22779,22876..23679,23781..23836,23940..24029,24133..24384,24509..24662,24769..24931,25026..25110,25199..25977,26052..26156,26304..27909))	Acanthamoeba castellanii str. Neff	14921361
ACA1_098800	CDS	ACA1_098800	NW_004457582.1	29807	32416	D	encoded by transcript ACA1_098800A; ubiquitin specific protease 44 isoform 2, putative	join(29807..30057,30180..30309,30394..30457,30545..30688,30792..30884,30992..31101,31225..31286,31377..31463,31563..31722,31836..31861,31894..32416)	Acanthamoeba castellanii str. Neff	14921362
ACA1_098810	CDS	ACA1_098810	NW_004457582.1	32851	33555	D	encoded by transcript ACA1_098810A; SYS1 integral membrane protein, putative	join(32851..33077,33162..33322,33476..33555)	Acanthamoeba castellanii str. Neff	14921363
ACA1_098820	CDS	ACA1_098820	NW_004457582.1	34606	35598	D	encoded by transcript ACA1_098820A; uncharacterized protein	34606..35598	Acanthamoeba castellanii str. Neff	14921366
ACA1_098830	CDS	ACA1_098830	NW_004457582.1	36009	37718	D	encoded by transcript ACA1_098830A; uncharacterized protein	join(36009..37147,37161..37168,37192..37356,37452..37512,37625..37718)	Acanthamoeba castellanii str. Neff	14921367
ACA1_098840	CDS	ACA1_098840	NW_004457582.1	38150	40934	R	encoded by transcript ACA1_098840A; uncharacterized protein	complement(join(38150..38345,38523..38791,38867..39702,39805..40471,40581..40934))	Acanthamoeba castellanii str. Neff	14921368
ACA1_098860	CDS	ACA1_098860	NW_004457582.1	44424	49481	D	encoded by transcript ACA1_098860A; uncharacterized protein	join(44424..44429,44440..44583,44709..45185,45271..45414,45531..45713,45789..45907,45975..46125,46199..46465,46537..46718,46826..47239,47306..47367,47459..47897,47976..48159,48303..48332,48428..48670,48795..48873,48974..49200,49296..49481)	Acanthamoeba castellanii str. Neff	14921370
ACA1_098870	CDS	ACA1_098870	NW_004457582.1	49569	51772	D	encoded by transcript ACA1_098870A; RNA methyltransferase	join(49569..49753,49894..49965,50060..50140,50349..50597,50707..50792,50891..51006,51254..51389,51579..51772)	Acanthamoeba castellanii str. Neff	14921371
ACA1_098880	CDS	ACA1_098880	NW_004457582.1	51863	55776	R	encoded by transcript ACA1_098880A; spindle pole body interacting protein	complement(join(51863..51940,51991..52116,52250..52313,52438..52532,52729..52869,52978..53034,53127..53295,53419..53498,53568..53714,53821..53940,54029..54103,54181..54237,54355..54518,54617..54688,54781..54860,55027..55109,55199..55360,55461..55539,55661..55776))	Acanthamoeba castellanii str. Neff	14921372
ACA1_098890	CDS	ACA1_098890	NW_004457582.1	56752	57894	D	encoded by transcript ACA1_098890A; uncharacterized protein	join(56752..56775,56908..56982,57139..57221,57295..57428,57451..57561,57776..57894)	Acanthamoeba castellanii str. Neff	14921373
ACA1_098900	CDS	ACA1_098900	NW_004457582.1	58808	60042	R	encoded by transcript ACA1_098900A; Putative transcriptional regulator cudA	complement(join(58808..58872,58938..60042))	Acanthamoeba castellanii str. Neff	14921374
ACA1_098910	CDS	ACA1_098910	NW_004457582.1	60297	61640	R	encoded by transcript ACA1_098910A; opioid growth factor receptor (ogfr) region protein, putative	complement(join(60297..61019,61122..61209,61301..61403,61538..61640))	Acanthamoeba castellanii str. Neff	14921375
ACA1_098920	CDS	ACA1_098920	NW_004457582.1	61882	66676	R	encoded by transcript ACA1_098920A; RhoGEF domain containing protein	complement(join(61882..61942,62076..62488,62568..62705,62820..62945,63055..63270,63350..63420,63513..63660,63774..63898,64016..64080,64187..64249,64355..64452,64613..64669,64767..64874,64962..65039,65150..65260,65370..65476,65578..65703,65835..66384,66554..66676))	Acanthamoeba castellanii str. Neff	14921376
ACA1_098930	CDS	ACA1_098930	NW_004457582.1	67444	71922	R	encoded by transcript ACA1_098930A; ABC transporter, ATPbinding domain containing protein	complement(join(67444..67562,67646..67801,67868..68043,68155..68314,68350..68578,68683..68872,68974..69086,69147..69265,69427..69570,69685..69815,69907..69989,70091..70356,70476..70550,70627..70749,70852..70938,71025..71046,71068..71112,71219..71356,71461..71507,71591..71687,71842..71922))	Acanthamoeba castellanii str. Neff	14921377
ACA1_098950	CDS	ACA1_098950	NW_004457582.1	73739	74035	D	encoded by transcript ACA1_098950A; uncharacterized protein	join(73739..73861,73928..74035)	Acanthamoeba castellanii str. Neff	14921379
ACA1_098960	CDS	ACA1_098960	NW_004457582.1	74137	75606	D	encoded by transcript ACA1_098960A; Histone-lysine N-methyltransferase	join(74137..74775,74868..75048,75140..75228,75301..75606)	Acanthamoeba castellanii str. Neff	14921380
ACA1_098970	CDS	ACA1_098970	NW_004457582.1	76040	76715	R	encoded by transcript ACA1_098970A; uncharacterized protein	complement(join(76040..76202,76280..76366,76459..76542,76609..76715))	Acanthamoeba castellanii str. Neff	14921381
ACA1_098980	CDS	ACA1_098980	NW_004457582.1	76797	82225	R	encoded by transcript ACA1_098980A; serine/threonine kinase	complement(join(76797..79001,79148..79188,79295..79520,79621..79740,79818..81560,81654..81958,82162..82225))	Acanthamoeba castellanii str. Neff	14921382
ACA1_098990	CDS	ACA1_098990	NW_004457582.1	82796	85415	R	encoded by transcript ACA1_098990A; uncharacterized protein	complement(join(82796..85161,85284..85350,85410..85415))	Acanthamoeba castellanii str. Neff	14921383
ACA1_099100	CDS	ACA1_099100	NW_004457582.1	88708	92761	D	encoded by transcript ACA1_099100A; PH domain containing protein	join(88708..88800,88982..89008,89108..89202,89318..89429,89504..89611,89696..89827,89917..89969,90059..90167,90246..90371,90464..90534,90648..90912,91012..91129,91198..91961,92034..92130,92229..92401,92472..92615,92729..92761)	Acanthamoeba castellanii str. Neff	14921384
ACA1_099210	CDS	ACA1_099210	NW_004457582.1	95237	95749	D	encoded by transcript ACA1_099210A; uncharacterized protein	join(95237..95301,95321..95625,95685..95749)	Acanthamoeba castellanii str. Neff	14921385
ACA1_099220	CDS	ACA1_099220	NW_004457582.1	96276	97550	D	encoded by transcript ACA1_099220A; glutathione transferase family protein	join(96276..96421,96508..96577,96655..96731,96806..96881,96947..97072,97156..97355,97484..97550)	Acanthamoeba castellanii str. Neff	14921386
ACA1_099230	CDS	ACA1_099230	NW_004457582.1	97977	98529	R	encoded by transcript ACA1_099230A; uncharacterized protein	complement(join(97977..98067,98153..98216,98313..98529))	Acanthamoeba castellanii str. Neff	14921387
ACA1_099240	CDS	ACA1_099240	NW_004457582.1	99594	100513	D	encoded by transcript ACA1_099240A; uncharacterized protein	join(99594..99725,99753..99810,100100..100278,100388..100513)	Acanthamoeba castellanii str. Neff	14921388
ACA1_099250	CDS	ACA1_099250	NW_004457582.1	100641	101567	R	encoded by transcript ACA1_099250A; uncharacterized protein	complement(100641..101567)	Acanthamoeba castellanii str. Neff	14921389
ACA1_099260	CDS	ACA1_099260	NW_004457582.1	101918	103201	D	encoded by transcript ACA1_099260A; uncharacterized protein	join(101918..102386,102474..103201)	Acanthamoeba castellanii str. Neff	14921390
ACA1_105130	CDS	ACA1_105130	NW_004457581.1	58	1057	R	encoded by transcript ACA1_105130A; phosphate ABC transporter, periplasmic phosphatebinding protein	complement(join(58..330,414..557,632..801,875..946,1009..1057))	Acanthamoeba castellanii str. Neff	14921352
ACA1_105240	CDS	ACA1_105240	NW_004457581.1	6643	7159	D	encoded by transcript ACA1_105240A; signal peptide peptidase, putative	join(6643..6817,6876..6937,6980..7159)	Acanthamoeba castellanii str. Neff	14921349
ACA1_105260	CDS	ACA1_105260	NW_004457581.1	11017	11454	R	encoded by transcript ACA1_105260A; uncharacterized protein	complement(11017..11454)	Acanthamoeba castellanii str. Neff	14921351
ACA1_039620	CDS	ACA1_039620	NW_004457579.1	148	4617	R	encoded by transcript ACA1_039620A; AMPdependent synthetase and ligase	complement(join(<148..265,350..457,524..631,723..1053,1137..1200,1213..1263,1395..1478,1613..1872,1941..2203,2284..2358,2493..2624,2705..2789,2895..3015,3140..3316,3391..3469,3559..3646,3727..3837,3922..4004,4136..4293,4612..4617))	Acanthamoeba castellanii str. Neff	14921346
ACA1_039630	CDS	ACA1_039630	NW_004457579.1	4998	5513	R	encoded by transcript ACA1_039630A; Fbox domain containing protein	complement(4998..5513)	Acanthamoeba castellanii str. Neff	14921343
ACA1_039640	CDS	ACA1_039640	NW_004457579.1	5973	10933	D	encoded by transcript ACA1_039640A; uncharacterized protein	join(5973..6183,6295..8039,8053..9053,9555..9758,9816..9911,10011..10128,10276..10422,10498..10621,10714..10825,10855..10933)	Acanthamoeba castellanii str. Neff	14921347
ACA1_039650	CDS	ACA1_039650	NW_004457579.1	12248	13529	R	encoded by transcript ACA1_039650A; uncharacterized protein	complement(join(12248..12375,12461..12784,12936..13054,13160..13237,13357..13529))	Acanthamoeba castellanii str. Neff	14921348
ACA1_039660	CDS	ACA1_039660	NW_004457579.1	14339	18595	D	encoded by transcript ACA1_039660A; NAD+ dependent glutamate dehydrogenase	join(14339..14445,14609..14713,14936..15099,15251..15682,15770..16427,16500..16774,16891..17072,17196..17295,17385..18104,18176..18290,18382..18595)	Acanthamoeba castellanii str. Neff	14921344
ACA1_039770	CDS	ACA1_039770	NW_004457579.1	30194	30525	D	encoded by transcript ACA1_039770A; uncharacterized protein	join(<30194..30353,30413..>30525)	Acanthamoeba castellanii str. Neff	14921345
ACA1_000790	CDS	ACA1_000790	NW_004457578.1	5136	5699	D	encoded by transcript ACA1_000790A; uncharacterized protein	5136..5699	Acanthamoeba castellanii str. Neff	14921342
ACA1_000800	CDS	ACA1_000800	NW_004457578.1	6120	6801	R	encoded by transcript ACA1_000800A; uncharacterized protein	complement(join(6120..6344,6410..6547,6685..>6801))	Acanthamoeba castellanii str. Neff	14921340
ACA1_000810	CDS	ACA1_000810	NW_004457578.1	7075	7588	R	encoded by transcript ACA1_000810A; guanine exchange factor for rac 30, putative	complement(join(7075..7179,7300..7397,7546..7588))	Acanthamoeba castellanii str. Neff	14921341
ACA1_000820	CDS	ACA1_000820	NW_004457578.1	8485	13504	D	encoded by transcript ACA1_000820A; MYC binding protein 2, putative	join(8485..8859,8940..9107,9183..9531,9607..9709,9796..9880,9954..10098,10169..10871,10966..11325,11406..11481,11598..11656,11730..11787,11884..11937,12025..12171,12195..12263,12354..12444,12537..12597,12672..12784,12856..12947,13040..13124,13205..13273,13371..13504)	Acanthamoeba castellanii str. Neff	14921337
ACA1_000830	CDS	ACA1_000830	NW_004457578.1	13654	14449	R	encoded by transcript ACA1_000830A; glyoxalase family protein	complement(join(13654..13931,14041..14449))	Acanthamoeba castellanii str. Neff	14921338
ACA1_000840	CDS	ACA1_000840	NW_004457578.1	15125	16896	D	encoded by transcript ACA1_000840A; uncharacterized protein	join(15125..15347,15452..15567,15655..15778,15908..16204,16354..16506,16654..16755,16844..>16896)	Acanthamoeba castellanii str. Neff	14921339
ACA1_302700	CDS	ACA1_302700	NW_004457577.1	5631	7802	R	encoded by transcript ACA1_302700A; protein phosphatase 2C domain containing protein	complement(join(5631..5777,5892..5946,6088..6182,6255..6350,6517..6592,6659..6780,6864..7242,7351..7802))	Acanthamoeba castellanii str. Neff	14921336
ACA1_302810	CDS	ACA1_302810	NW_004457577.1	11128	14358	D	encoded by transcript ACA1_302810A; p21activated protein kinase PakA, putative	join(11128..11156,11194..11276,11404..11529,11718..11780,11890..11953,12127..12313,12458..12547,12725..12781,12944..12986,13169..13242,13366..13410,13643..13720,13882..14019,14215..14358)	Acanthamoeba castellanii str. Neff	14921335
ACA1_317650	CDS	ACA1_317650	NW_004457575.1	1505	1895	R	encoded by transcript ACA1_317650A; uncharacterized protein	complement(join(1505..1649,1726..1895))	Acanthamoeba castellanii str. Neff	14921333
ACA1_317660	CDS	ACA1_317660	NW_004457575.1	2277	2642	R	encoded by transcript ACA1_317660A; uncharacterized protein	complement(2277..2642)	Acanthamoeba castellanii str. Neff	14921334
ACA1_317670	CDS	ACA1_317670	NW_004457575.1	2964	4082	R	encoded by transcript ACA1_317670A; cathepsin L, putative	complement(join(2964..3553,3626..4082))	Acanthamoeba castellanii str. Neff	14921331
ACA1_205660	CDS	ACA1_205660	NW_004457574.1	21351	22805	D	encoded by transcript ACA1_205660A; heat shock protein 82, putative	join(<21351..21775,21862..22249,22373..22431,22469..22805)	Acanthamoeba castellanii str. Neff	14921330
ACA1_205670	CDS	ACA1_205670	NW_004457574.1	22927	25702	R	encoded by transcript ACA1_205670A; WD domain, Gbeta repeat domain containing protein	complement(join(22927..23050,23139..23213,23312..23568,23679..23820,24117..24351,24469..24605,24712..24785,24955..25140,25293..25367,25462..25542,25634..>25702))	Acanthamoeba castellanii str. Neff	14921305
ACA1_205780	CDS	ACA1_205780	NW_004457574.1	27227	27870	D	encoded by transcript ACA1_205780A; uncharacterized protein	join(<27227..27479,27590..27870)	Acanthamoeba castellanii str. Neff	14921306
ACA1_205890	CDS	ACA1_205890	NW_004457574.1	29098	29332	R	encoded by transcript ACA1_205890A; uncharacterized protein	complement(join(29098..29115,29144..29332))	Acanthamoeba castellanii str. Neff	14921307
ACA1_205900	CDS	ACA1_205900	NW_004457574.1	31011	31637	R	encoded by transcript ACA1_205900A; uncharacterized protein	complement(join(31011..31470,31552..31637))	Acanthamoeba castellanii str. Neff	14921308
ACA1_205910	CDS	ACA1_205910	NW_004457574.1	32560	35020	D	encoded by transcript ACA1_205910A; heat shock protein 90 alpha, putative	join(32560..32912,33005..33967,34056..34443,34574..35020)	Acanthamoeba castellanii str. Neff	14921309
ACA1_205920	CDS	ACA1_205920	NW_004457574.1	35139	39515	R	encoded by transcript ACA1_205920A; WD domain, Gbeta repeat domain containing protein	complement(join(35139..35262,35348..35422,35522..35778,35871..36012,36084..36178,36343..36422,36514..36611,36671..36831,36977..37085,37178..37300,37395..37509,37613..37843,37971..38107,38229..38302,38430..38615,38736..38810,38888..38968,39068..39154,39236..39377,39490..39515))	Acanthamoeba castellanii str. Neff	14921310
ACA1_205940	CDS	ACA1_205940	NW_004457574.1	40788	42026	D	encoded by transcript ACA1_205940A; uncharacterized protein	join(40788..41207,41313..42026)	Acanthamoeba castellanii str. Neff	14921312
ACA1_205950	CDS	ACA1_205950	NW_004457574.1	42098	42751	R	encoded by transcript ACA1_205950A; uncharacterized protein	complement(join(42098..42258,42380..42548,42629..42751))	Acanthamoeba castellanii str. Neff	14921313
ACA1_205960	CDS	ACA1_205960	NW_004457574.1	42929	54445	R	encoded by transcript ACA1_205960A; dual specificity phosphatase, catalytic domain containing protein	complement(join(42929..43348,43385..43414,43526..43627,43743..44211,44336..44435,44519..44607,44690..44930,45003..45154,45240..45381,45394..45516,45657..45951,46025..46218,46341..46420,46473..46636,46725..46898,46988..47145,47215..47360,47388..48330,48484..49801,49996..50241,50333..50438,50524..50678,50778..50936,51027..51167,51225..51374,51453..51573,51675..51768,51835..51949,52027..52134,52215..52474,52556..52618,52691..52905,52983..53069,53148..53422,53497..53622,53709..53852,53928..54026,54103..54336,54404..54445))	Acanthamoeba castellanii str. Neff	14921314
ACA1_205970	CDS	ACA1_205970	NW_004457574.1	54674	55936	R	encoded by transcript ACA1_205970A; uncharacterized protein	complement(join(54674..54691,54721..54813,54888..55024,55107..55230,55302..55411,55478..55683,55773..55936))	Acanthamoeba castellanii str. Neff	14921315
ACA1_205980	CDS	ACA1_205980	NW_004457574.1	56468	57789	D	encoded by transcript ACA1_205980A; ankyrin 2,3/unc44, putative	join(56468..56686,56806..56914,57002..57122,57198..57311,57416..57600,57692..57789)	Acanthamoeba castellanii str. Neff	14921316
ACA1_205990	CDS	ACA1_205990	NW_004457574.1	57868	60398	R	encoded by transcript ACA1_205990A; histidine acid phosphatase superfamily protein	complement(join(57868..57902,57969..58197,58289..58381,58446..58590,58671..58768,58850..58986,59086..59140,59217..59320,59400..59613,59773..59856,59932..59996,60061..60109,60234..60398))	Acanthamoeba castellanii str. Neff	14921317
ACA1_206000	CDS	ACA1_206000	NW_004457574.1	60576	61399	D	encoded by transcript ACA1_206000A; succinate dehydrogenase, cytochrome b556 subunit protein	join(60576..60822,61009..61166,61286..61399)	Acanthamoeba castellanii str. Neff	14921318
ACA1_206010	CDS	ACA1_206010	NW_004457574.1	61532	63060	R	encoded by transcript ACA1_206010A; proliferating cell nuclear antigen, cterminal domain containing protein	complement(join(61532..61625,61702..61835,61895..61938,62007..62114,62178..62213,62289..62316,62383..62430,62497..62573,62870..62979,63044..63060))	Acanthamoeba castellanii str. Neff	14921319
ACA1_206020	CDS	ACA1_206020	NW_004457574.1	63415	65376	D	encoded by transcript ACA1_206020A; serine/threonine protein kinase (Nrc2), putative	join(63415..63837,63923..64094,64306..64574,64647..64739,64830..64922,65025..65253,65357..65376)	Acanthamoeba castellanii str. Neff	14921320
ACA1_206030	CDS	ACA1_206030	NW_004457574.1	65779	67719	D	encoded by transcript ACA1_206030A; abnormal long morphology protein	join(65779..65867,65935..66013,66129..66261,66428..66654,66731..66813,66919..67020,67231..67271,67383..67566,67662..67719)	Acanthamoeba castellanii str. Neff	14921321
ACA1_206040	CDS	ACA1_206040	NW_004457574.1	68241	69922	D	encoded by transcript ACA1_206040A; MORN repeat-containing protein	join(68241..68261,68344..68626,68717..68855,68949..69190,69283..69410,69494..69922)	Acanthamoeba castellanii str. Neff	14921322
ACA1_206050	CDS	ACA1_206050	NW_004457574.1	70041	71472	D	encoded by transcript ACA1_206050A; Ankyrin repeat domain containing protein	join(70041..70165,70254..70428,70491..70583,70670..70790,70864..71084,71166..71228,71335..71472)	Acanthamoeba castellanii str. Neff	14921323
ACA1_206060	CDS	ACA1_206060	NW_004457574.1	71557	72738	D	encoded by transcript ACA1_206060A; Ras subfamily protein	join(71557..71647,71727..71787,71869..71992,72082..72230,72313..72402,72474..72738)	Acanthamoeba castellanii str. Neff	14921324
ACA1_206070	CDS	ACA1_206070	NW_004457574.1	73299	74350	D	encoded by transcript ACA1_206070A; Ras subfamily protein	join(73299..73369,73444..73545,73617..73862,73934..74023,74101..74350)	Acanthamoeba castellanii str. Neff	14921325
ACA1_206080	CDS	ACA1_206080	NW_004457574.1	74459	75094	R	encoded by transcript ACA1_206080A; uncharacterized protein	complement(74459..75094)	Acanthamoeba castellanii str. Neff	14921326
ACA1_206090	CDS	ACA1_206090	NW_004457574.1	77171	78091	D	encoded by transcript ACA1_206090A; cellulase	join(77171..77210,77319..77539,77664..77933,78015..>78091)	Acanthamoeba castellanii str. Neff	14921327
ACA1_206200	CDS	ACA1_206200	NW_004457574.1	79943	80415	D	encoded by transcript ACA1_206200A; Cellulase	join(79943..80049,80116..80197,80278..80415)	Acanthamoeba castellanii str. Neff	14921328
ACA1_206210	CDS	ACA1_206210	NW_004457574.1	80751	81297	R	encoded by transcript ACA1_206210A; uncharacterized protein	complement(join(80751..81104,81211..>81297))	Acanthamoeba castellanii str. Neff	14921329
ACA1_194500	CDS	ACA1_194500	NW_004457573.1	1778	4281	D	encoded by transcript ACA1_194500A; serine/threonine protein kinase, putative	join(1778..1840,1933..2004,2118..2255,2348..2656,2958..3088,3187..3380,3487..3596,3673..4281)	Acanthamoeba castellanii str. Neff	14921304
ACA1_194610	CDS	ACA1_194610	NW_004457573.1	4312	8253	D	encoded by transcript ACA1_194610A; serine/threonine protein kinase, putative	join(4312..4436,4543..5056,5163..5279,5368..5729,5847..6000,6088..6243,6313..6410,6475..6639,6731..6884,6979..7087,7179..7828,7886..8000,8147..8253)	Acanthamoeba castellanii str. Neff	14921265
ACA1_194720	CDS	ACA1_194720	NW_004457573.1	9434	9630	R	encoded by transcript ACA1_194720A; uncharacterized protein	complement(join(9434..9596,9611..9630))	Acanthamoeba castellanii str. Neff	14921275
ACA1_194830	CDS	ACA1_194830	NW_004457573.1	12493	12972	D	encoded by transcript ACA1_194830A; ISSoc2 resolvase, putative	12493..12972	Acanthamoeba castellanii str. Neff	14921276
ACA1_194840	CDS	ACA1_194840	NW_004457573.1	13484	13924	D	encoded by transcript ACA1_194840A; uncharacterized protein	join(13484..13590,13612..13924)	Acanthamoeba castellanii str. Neff	14921266
ACA1_194850	CDS	ACA1_194850	NW_004457573.1	13988	14809	D	encoded by transcript ACA1_194850A; transposase	13988..14809	Acanthamoeba castellanii str. Neff	14921267
ACA1_194860	CDS	ACA1_194860	NW_004457573.1	15313	17185	R	encoded by transcript ACA1_194860A; uncharacterized protein	complement(join(15313..15494,15609..15760,15916..16018,16110..16238,16370..16454,16792..16892,17014..17185))	Acanthamoeba castellanii str. Neff	14921268
ACA1_194870	CDS	ACA1_194870	NW_004457573.1	17660	20028	D	encoded by transcript ACA1_194870A; multiple CXCXC repeat domain containing protein	join(17660..17714,17806..17851,17948..18073,18147..18274,18613..18672,18758..18868,18963..19060,19139..19289,19370..19445,19569..20028)	Acanthamoeba castellanii str. Neff	14921269
ACA1_194880	CDS	ACA1_194880	NW_004457573.1	20217	21788	R	encoded by transcript ACA1_194880A; hydrolase	complement(join(20217..20388,20456..20594,20667..20779,20890..21001,21090..21134,21215..21322,21384..21493,21592..21788))	Acanthamoeba castellanii str. Neff	14921270
ACA1_194890	CDS	ACA1_194890	NW_004457573.1	22992	26341	R	encoded by transcript ACA1_194890A; protein kinase domain containing protein	complement(join(22992..23147,23264..23358,23437..23536,23660..23739,23825..23893,23968..24109,24180..24287,24395..24477,24677..24734,24817..24941,25053..25188,25300..25407,25486..25556,25849..25882,25970..26044,26141..26192,26271..26341))	Acanthamoeba castellanii str. Neff	14921271
ACA1_194900	CDS	ACA1_194900	NW_004457573.1	26642	27272	R	encoded by transcript ACA1_194900A; uncharacterized protein	complement(join(26642..26782,27195..27272))	Acanthamoeba castellanii str. Neff	14921272
ACA1_194910	CDS	ACA1_194910	NW_004457573.1	27740	30505	R	encoded by transcript ACA1_194910A; alkaline phosphatase family subfamily protein	complement(join(27740..27839,27924..28018,28081..28154,28252..28392,28488..28590,28619..28813,28892..28941,29034..29181,29244..29469,29547..29626,29715..29778,29850..30034,30161..30299,30378..30505))	Acanthamoeba castellanii str. Neff	14921273
ACA1_194920	CDS	ACA1_194920	NW_004457573.1	30998	32177	D	encoded by transcript ACA1_194920A; 20S proteasome alpha subunit F, putative	join(30998..31340,31418..31488,31595..31724,31853..32010,32130..32177)	Acanthamoeba castellanii str. Neff	14921274
ACA1_194930	CDS	ACA1_194930	NW_004457573.1	32463	34700	D	encoded by transcript ACA1_194930A; matrix attachment region binding protein	join(32463..32581,32931..33301,33409..33543,33644..34080,34185..34700)	Acanthamoeba castellanii str. Neff	14921277
ACA1_194940	CDS	ACA1_194940	NW_004457573.1	34812	36916	R	encoded by transcript ACA1_194940A; uncharacterized protein	complement(join(34812..34979,35061..35175,35229..35287,35384..35515,35582..35681,35759..35878,35957..36061,36166..36220,36293..36379,36466..36538,36653..36916))	Acanthamoeba castellanii str. Neff	14921278
ACA1_194950	CDS	ACA1_194950	NW_004457573.1	37088	37542	D	encoded by transcript ACA1_194950A; uncharacterized protein	join(37088..37185,37245..37306,37421..37542)	Acanthamoeba castellanii str. Neff	14921279
ACA1_194960	CDS	ACA1_194960	NW_004457573.1	37617	42177	D	encoded by transcript ACA1_194960A; myotubularin 1, putative	join(<37617..37823,37901..37999,38066..38161,38240..38336,38415..38512,38592..38723,38801..38908,38981..39088,39170..39247,39328..39465,39562..39755,39906..40091,40147..40388,40456..40693,40773..40896,41001..41166,41255..41331,41413..41513,41583..41783,41874..42177)	Acanthamoeba castellanii str. Neff	14921280
ACA1_194970	CDS	ACA1_194970	NW_004457573.1	42514	44409	D	encoded by transcript ACA1_194970A; Camk2b protein	join(42514..42596,42679..42888,43029..43159,43278..43285,43364..43490,43568..43658,43748..43802,43877..44020,44109..44186,44287..44409)	Acanthamoeba castellanii str. Neff	14921281
ACA1_194980	CDS	ACA1_194980	NW_004457573.1	44605	45972	R	encoded by transcript ACA1_194980A; LIM domain containing protein	complement(join(44605..44768,44861..44914,44998..45454,45718..45972))	Acanthamoeba castellanii str. Neff	14921282
ACA1_194990	CDS	ACA1_194990	NW_004457573.1	46146	47604	D	encoded by transcript ACA1_194990A; methyltransferase domain containing protein	join(46146..46283,46375..46499,46584..46674,46770..46838,46915..47053,47085..47397,47484..47579,47598..47604)	Acanthamoeba castellanii str. Neff	14921283
ACA1_195000	CDS	ACA1_195000	NW_004457573.1	47733	54045	D	encoded by transcript ACA1_195000A; CAPGly domain containing protein	join(47733..47901,48027..48091,48174..48662,48752..48880,48979..49150,49243..49682,49793..49904,50011..50231,50322..50633,50719..50904,51023..51140,51215..51440,51520..51670,51777..52302,52405..52667,52750..52840,52923..53109,53192..53375,53458..53538,53630..53740,53833..54045)	Acanthamoeba castellanii str. Neff	14921284
ACA1_195010	CDS	ACA1_195010	NW_004457573.1	54262	54672	R	encoded by transcript ACA1_195010A; uncharacterized protein	complement(54262..54672)	Acanthamoeba castellanii str. Neff	14921285
ACA1_195020	CDS	ACA1_195020	NW_004457573.1	54800	57975	D	encoded by transcript ACA1_195020A; CBF/Mak21 family protein	join(54800..54988,55088..55306,55410..55518,55605..55716,55791..56250,56325..56476,56565..56675,56775..56974,57047..57570,57655..57768,57859..57975)	Acanthamoeba castellanii str. Neff	14921286
ACA1_195030	CDS	ACA1_195030	NW_004457573.1	58330	59239	D	encoded by transcript ACA1_195030A; DHHC zinc finger domain containing protein	join(58330..58469,58576..58733,58874..58960,59061..59239)	Acanthamoeba castellanii str. Neff	14921287
ACA1_195040	CDS	ACA1_195040	NW_004457573.1	59466	60334	D	encoded by transcript ACA1_195040A; uncharacterized protein	join(59466..59624,59738..59829,59929..60020,60120..60334)	Acanthamoeba castellanii str. Neff	14921288
ACA1_195050	CDS	ACA1_195050	NW_004457573.1	60807	61971	D	encoded by transcript ACA1_195050A; CyclinC, putative	join(60807..60910,60995..61113,61195..61274,61371..61450,61530..61677,61795..61971)	Acanthamoeba castellanii str. Neff	14921289
ACA1_195060	CDS	ACA1_195060	NW_004457573.1	62102	64194	R	encoded by transcript ACA1_195060A; uncharacterized protein	complement(join(62102..62146,62216..62486,62632..63010,63117..63228,63311..63894,63983..64036,64110..64194))	Acanthamoeba castellanii str. Neff	14921290
ACA1_195170	CDS	ACA1_195170	NW_004457573.1	68010	68159	R	encoded by transcript ACA1_195170A; uncharacterized protein	complement(<68010..68159)	Acanthamoeba castellanii str. Neff	14921291
ACA1_195180	CDS	ACA1_195180	NW_004457573.1	68581	69531	R	encoded by transcript ACA1_195180A; Coiled-coil domain containing protein 94, putative	complement(68581..69531)	Acanthamoeba castellanii str. Neff	14921292
ACA1_195190	CDS	ACA1_195190	NW_004457573.1	69716	70607	D	encoded by transcript ACA1_195190A; uncharacterized protein	join(69716..70142,70237..70353,70426..70607)	Acanthamoeba castellanii str. Neff	14921293
ACA1_195200	CDS	ACA1_195200	NW_004457573.1	70675	73905	D	encoded by transcript ACA1_195200A; Fbox domain containing protein	join(70675..71407,71499..71938,72019..72092,72175..72263,72341..72448,72533..72649,72726..72843,72918..73121,73217..73328,73405..73905)	Acanthamoeba castellanii str. Neff	14921294
ACA1_195210	CDS	ACA1_195210	NW_004457573.1	74116	75090	R	encoded by transcript ACA1_195210A; uncharacterized protein	complement(74116..75090)	Acanthamoeba castellanii str. Neff	14921295
ACA1_195220	CDS	ACA1_195220	NW_004457573.1	75706	76847	R	encoded by transcript ACA1_195220A; uncharacterized protein	complement(join(75706..75848,75971..76232,76326..76435,76516..76782,76829..76847))	Acanthamoeba castellanii str. Neff	14921296
ACA1_195230	CDS	ACA1_195230	NW_004457573.1	77381	81666	D	encoded by transcript ACA1_195230A; RNB family domain containing protein	join(77381..77759,77843..81666)	Acanthamoeba castellanii str. Neff	14921297
ACA1_195240	CDS	ACA1_195240	NW_004457573.1	82018	82528	D	encoded by transcript ACA1_195240A; CBS domain containing protein	join(82018..82355,82411..82528)	Acanthamoeba castellanii str. Neff	14921298
ACA1_195250	CDS	ACA1_195250	NW_004457573.1	82581	84086	D	encoded by transcript ACA1_195250A; uncharacterized protein	join(82581..82635,82740..82816,82886..82999,83076..83401,83479..83563,83624..83740,83823..84086)	Acanthamoeba castellanii str. Neff	14921299
ACA1_195260	CDS	ACA1_195260	NW_004457573.1	84890	86972	D	encoded by transcript ACA1_195260A; MutL dimerization domain containing protein	join(84890..85015,85072..85165,85349..85614,85691..85826,85950..86026,86086..86246,86306..86359,86563..86741,86830..86930,86952..86972)	Acanthamoeba castellanii str. Neff	14921300
ACA1_195270	CDS	ACA1_195270	NW_004457573.1	87250	87779	D	encoded by transcript ACA1_195270A; uncharacterized protein	join(87250..87373,87446..87502,87631..87779)	Acanthamoeba castellanii str. Neff	14921301
ACA1_195280	CDS	ACA1_195280	NW_004457573.1	87880	91054	D	encoded by transcript ACA1_195280A; GTPaseactivator protein for Ras-like GTPase	join(87880..87990,88009..88083,88094..88448,88518..88762,88845..89398,89470..89586,89599..89698,89806..89898,89978..91054)	Acanthamoeba castellanii str. Neff	14921302
ACA1_195290	CDS	ACA1_195290	NW_004457573.1	91130	92613	R	encoded by transcript ACA1_195290A; uncharacterized protein	complement(join(91130..91422,91488..91667,91737..92034,92164..92249,92332..92375,92462..92613))	Acanthamoeba castellanii str. Neff	14921303
ACA1_352610	CDS	ACA1_352610	NW_004457572.1	1630	5859	D	encoded by transcript ACA1_352610A; uncharacterized protein	1630..5859	Acanthamoeba castellanii str. Neff	14921263
ACA1_352720	CDS	ACA1_352720	NW_004457572.1	8759	9406	D	encoded by transcript ACA1_352720A; uncharacterized protein	join(8759..8920,8990..9406)	Acanthamoeba castellanii str. Neff	14921264
ACA1_352730	CDS	ACA1_352730	NW_004457572.1	11335	12144	D	encoded by transcript ACA1_352730A; uncharacterized protein	join(11335..11380,11437..11453,11546..11633,11872..11968,12054..12144)	Acanthamoeba castellanii str. Neff	14921260
ACA1_352740	CDS	ACA1_352740	NW_004457572.1	12212	12624	R	encoded by transcript ACA1_352740A; uncharacterized protein	complement(join(12212..12272,12479..12624))	Acanthamoeba castellanii str. Neff	14921261
ACA1_352750	CDS	ACA1_352750	NW_004457572.1	13470	15208	D	encoded by transcript ACA1_352750A; uncharacterized protein	join(13470..14733,14751..15208)	Acanthamoeba castellanii str. Neff	14921262
ACA1_338740	CDS	ACA1_338740	NW_004457570.1	22	745	D	encoded by transcript ACA1_338740A; uncharacterized protein	join(<22..90,155..525,616..745)	Acanthamoeba castellanii str. Neff	14921259
ACA1_338750	CDS	ACA1_338750	NW_004457570.1	853	1166	R	encoded by transcript ACA1_338750A; uncharacterized protein	complement(join(853..1012,1027..1166))	Acanthamoeba castellanii str. Neff	14921246
ACA1_338760	CDS	ACA1_338760	NW_004457570.1	1275	2171	D	encoded by transcript ACA1_338760A; ankyrin repeat-containing protein	1275..2171	Acanthamoeba castellanii str. Neff	14921243
ACA1_338770	CDS	ACA1_338770	NW_004457570.1	3187	4338	D	encoded by transcript ACA1_338770A; ATPdependent RNA helicase dhx8, putative	3187..4338	Acanthamoeba castellanii str. Neff	14921244
ACA1_338780	CDS	ACA1_338780	NW_004457570.1	5214	5583	R	encoded by transcript ACA1_338780A; uncharacterized protein	complement(join(5214..5231,5242..5314,5396..5583))	Acanthamoeba castellanii str. Neff	14921245
ACA1_338790	CDS	ACA1_338790	NW_004457570.1	7001	7264	R	encoded by transcript ACA1_338790A; uncharacterized protein	complement(7001..7264)	Acanthamoeba castellanii str. Neff	14921241
ACA1_338800	CDS	ACA1_338800	NW_004457570.1	9867	12033	R	encoded by transcript ACA1_338800A; tubulin/FtsZ family, GTPase domain containing protein	complement(join(9867..9916,10060..10413,10711..10794,10871..11028,11133..11238,11327..11491,11598..11820,11836..11913,11986..12033))	Acanthamoeba castellanii str. Neff	14921242
ACA1_338910	CDS	ACA1_338910	NW_004457570.1	12692	14430	R	encoded by transcript ACA1_338910A; uncharacterized protein	complement(join(12692..12803,12922..13022,13038..13488,13499..13910,13986..14148,14236..14430))	Acanthamoeba castellanii str. Neff	14921247
ACA1_338920	CDS	ACA1_338920	NW_004457570.1	16626	17711	R	encoded by transcript ACA1_338920A; NmrAlike family protein	complement(join(16626..16808,16824..17012,17069..17330,17584..17711))	Acanthamoeba castellanii str. Neff	14921248
ACA1_338930	CDS	ACA1_338930	NW_004457570.1	19368	21371	D	encoded by transcript ACA1_338930A; uncharacterized protein	join(19368..19609,19624..20027,20138..20185,21002..21169,21235..21371)	Acanthamoeba castellanii str. Neff	14921249
ACA1_338940	CDS	ACA1_338940	NW_004457570.1	22249	22991	D	encoded by transcript ACA1_338940A; uncharacterized protein	join(22249..22309,22365..22495,22778..22867,22941..22991)	Acanthamoeba castellanii str. Neff	14921250
ACA1_338950	CDS	ACA1_338950	NW_004457570.1	22910	23719	R	encoded by transcript ACA1_338950A; major capsid protein	complement(22910..23719)	Acanthamoeba castellanii str. Neff	14921251
ACA1_338960	CDS	ACA1_338960	NW_004457570.1	24246	24581	D	encoded by transcript ACA1_338960A; uncharacterized protein	24246..24581	Acanthamoeba castellanii str. Neff	14921252
ACA1_338970	CDS	ACA1_338970	NW_004457570.1	25301	25879	R	encoded by transcript ACA1_338970A; uncharacterized protein	complement(join(25301..25579,25592..25879))	Acanthamoeba castellanii str. Neff	14921253
ACA1_338980	CDS	ACA1_338980	NW_004457570.1	25965	27380	R	encoded by transcript ACA1_338980A; uncharacterized protein	complement(25965..27380)	Acanthamoeba castellanii str. Neff	14921254
ACA1_338990	CDS	ACA1_338990	NW_004457570.1	27469	27987	R	encoded by transcript ACA1_338990A; uncharacterized protein	complement(27469..27987)	Acanthamoeba castellanii str. Neff	14921255
ACA1_339000	CDS	ACA1_339000	NW_004457570.1	28559	28933	R	encoded by transcript ACA1_339000A; uncharacterized protein	complement(join(28559..28749,28819..28933))	Acanthamoeba castellanii str. Neff	14921256
ACA1_339010	CDS	ACA1_339010	NW_004457570.1	30314	31208	R	encoded by transcript ACA1_339010A; uncharacterized protein	complement(join(30314..30416,30612..30761,30780..30943,31029..31208))	Acanthamoeba castellanii str. Neff	14921257
ACA1_339020	CDS	ACA1_339020	NW_004457570.1	31220	31984	R	encoded by transcript ACA1_339020A; class 3 lipase	complement(31220..31984)	Acanthamoeba castellanii str. Neff	14921258
ACA1_184590	CDS	ACA1_184590	NW_004457568.1	95	1721	R	encoded by transcript ACA1_184590A; AlphaN-acetylglucosaminidase, putative	complement(join(<95..336,365..452,537..600,686..816,862..1035,1138..1282,1399..1721))	Acanthamoeba castellanii str. Neff	14921240
ACA1_184600	CDS	ACA1_184600	NW_004457568.1	1868	5819	R	encoded by transcript ACA1_184600A; alpha-N-acetylglucosaminidase family protein	complement(join(1868..2108,2196..2306,2322..2346,2424..2532,2613..2688,2761..2842,2942..3038,3120..3175,3236..3319,3395..3656,3718..3790,3879..3936,4044..4218,4292..4633,4705..4768,4837..4967,5081..5215,5294..5438,5521..5819))	Acanthamoeba castellanii str. Neff	14921157
ACA1_184610	CDS	ACA1_184610	NW_004457568.1	6617	10186	D	encoded by transcript ACA1_184610A; protein kinase domain containing protein	join(6617..6795,6809..6815,6992..7262,7359..7771,7894..8074,8148..8866,8947..9024,9124..9232,9347..9779,9859..10186)	Acanthamoeba castellanii str. Neff	14921158
ACA1_184620	CDS	ACA1_184620	NW_004457568.1	10295	11788	D	encoded by transcript ACA1_184620A; hydrolase, NUDIX domain containing protein	join(10295..10427,10569..10660,10779..11001,11115..11199,11235..11327,11433..11493,11597..11788)	Acanthamoeba castellanii str. Neff	14921159
ACA1_184630	CDS	ACA1_184630	NW_004457568.1	11927	13472	D	encoded by transcript ACA1_184630A; zinc finger, C3HC4 type (RING finger) domain containing protein	join(11927..12191,12297..12337,12408..12527,12571..12813,12825..13079,13168..13262,13328..13472)	Acanthamoeba castellanii str. Neff	14921160
ACA1_184640	CDS	ACA1_184640	NW_004457568.1	13564	14816	D	encoded by transcript ACA1_184640A; uncharacterized protein	join(13564..13917,14020..14181,14247..14379,14469..14635,14706..14816)	Acanthamoeba castellanii str. Neff	14921161
ACA1_184650	CDS	ACA1_184650	NW_004457568.1	15012	27371	R	encoded by transcript ACA1_184650A; uncharacterized protein	complement(15012..27371)	Acanthamoeba castellanii str. Neff	14921162
ACA1_184670	CDS	ACA1_184670	NW_004457568.1	29543	32738	D	encoded by transcript ACA1_184670A; SPRY domain containing protein	join(29543..29690,30018..30159,30279..30388,30468..30553,30632..30706,30821..31467,31555..31666,31734..31820,31900..32117,32189..32458,32609..32738)	Acanthamoeba castellanii str. Neff	14921164
ACA1_184680	CDS	ACA1_184680	NW_004457568.1	33252	39127	D	encoded by transcript ACA1_184680A; 5'3' exonuclease, SAM domain containing protein	join(33252..33420,33516..33595,33675..33740,33795..33863,33934..34021,34118..34204,34291..34408,34487..34604,34709..34882,34974..35133,35210..35293,35422..35510,35618..35703,35787..35890,35990..36045,36160..36230,36342..36495,36640..36738,36834..36960,37054..37131,37214..37284,37479..37732,37829..37958,38053..38148,38264..38421,38492..38666,38788..38910,38999..39127)	Acanthamoeba castellanii str. Neff	14921165
ACA1_184690	CDS	ACA1_184690	NW_004457568.1	39231	40810	R	encoded by transcript ACA1_184690A; growth hormoneinducible transmembrane protein, putative	complement(join(39231..39404,39482..39585,39687..39856,39940..40317,40446..40810))	Acanthamoeba castellanii str. Neff	14921166
ACA1_184700	CDS	ACA1_184700	NW_004457568.1	41025	46454	D	encoded by transcript ACA1_184700A; calpain family cysteine protease domain containing protein	join(41025..41063,41193..41255,41366..41446,41634..41738,41807..41876,41957..42258,42349..42378,42515..42584,42668..42764,42878..42976,43107..43193,43291..43461,43613..43734,43819..44050,44140..44292,44412..44606,44681..44749,44825..45074,45189..45337,45460..45569,45729..46156,46287..46454)	Acanthamoeba castellanii str. Neff	14921167
ACA1_184710	CDS	ACA1_184710	NW_004457568.1	46837	47936	D	encoded by transcript ACA1_184710A; uncharacterized protein	join(46837..46985,47084..47445,47548..47936)	Acanthamoeba castellanii str. Neff	14921168
ACA1_184720	CDS	ACA1_184720	NW_004457568.1	48501	51207	D	encoded by transcript ACA1_184720A; uncharacterized protein	join(48501..48761,48867..48961,49094..49313,49415..49475,49572..49741,49835..49946,50034..50180,50252..50307,50450..50619,50716..50882,50978..51207)	Acanthamoeba castellanii str. Neff	14921169
ACA1_184730	CDS	ACA1_184730	NW_004457568.1	51687	52577	R	encoded by transcript ACA1_184730A; uncharacterized protein	complement(51687..52577)	Acanthamoeba castellanii str. Neff	14921170
ACA1_184740	CDS	ACA1_184740	NW_004457568.1	54300	55301	R	encoded by transcript ACA1_184740A; uncharacterized protein	complement(join(54300..54530,54654..55301))	Acanthamoeba castellanii str. Neff	14921171
ACA1_184750	CDS	ACA1_184750	NW_004457568.1	55777	56265	D	encoded by transcript ACA1_184750A; uncharacterized protein	55777..56265	Acanthamoeba castellanii str. Neff	14921172
ACA1_184760	CDS	ACA1_184760	NW_004457568.1	56449	57292	R	encoded by transcript ACA1_184760A; uncharacterized protein	complement(join(56449..56806,56883..57292))	Acanthamoeba castellanii str. Neff	14921173
ACA1_184770	CDS	ACA1_184770	NW_004457568.1	57596	60723	R	encoded by transcript ACA1_184770A; histidinolphosphate transaminase	complement(join(57596..57717,57844..58005,58073..58348,58430..58538,58649..58831,58909..59063,59163..59281,59385..59454,59586..59672,59839..59935,60012..60145,60334..60417,60507..60723))	Acanthamoeba castellanii str. Neff	14921174
ACA1_184780	CDS	ACA1_184780	NW_004457568.1	60928	62785	D	encoded by transcript ACA1_184780A; Yip1 domain containing protein	join(60928..60981,61186..61250,61368..61444,61561..61646,61728..61900,62000..62108,62207..62356,62480..62592,62671..62785)	Acanthamoeba castellanii str. Neff	14921175
ACA1_184890	CDS	ACA1_184890	NW_004457568.1	64132	64435	R	encoded by transcript ACA1_184890A; uncharacterized protein	complement(join(64132..64236,64322..64435))	Acanthamoeba castellanii str. Neff	14921176
ACA1_184900	CDS	ACA1_184900	NW_004457568.1	64643	67544	R	encoded by transcript ACA1_184900A; WD domain, Gbeta repeat domain containing protein	complement(join(64643..64837,64944..65447,65538..65639,65732..65824,65920..65988,66081..66223,66371..66465,66541..66599,66695..66931,67039..67172,67244..67544))	Acanthamoeba castellanii str. Neff	14921177
ACA1_184910	CDS	ACA1_184910	NW_004457568.1	67987	69709	R	encoded by transcript ACA1_184910A; uncharacterized protein	complement(join(67987..68310,68436..68559,68661..68786,68870..68999,69113..69356,69647..69709))	Acanthamoeba castellanii str. Neff	14921178
ACA1_184920	CDS	ACA1_184920	NW_004457568.1	70165	71121	D	encoded by transcript ACA1_184920A; uncharacterized protein	70165..71121	Acanthamoeba castellanii str. Neff	14921179
ACA1_184930	CDS	ACA1_184930	NW_004457568.1	71610	74591	D	encoded by transcript ACA1_184930A; DNA repair and recombination protein RAD54, putative	join(71610..71765,71895..71949,72028..72107,72186..72212,72290..72362,72453..72628,72738..72819,72909..72970,73104..73129,73210..73301,73394..73478,73584..73616,73680..73747,73823..73923,73994..74092,74211..74345,74412..74591)	Acanthamoeba castellanii str. Neff	14921180
ACA1_185040	CDS	ACA1_185040	NW_004457568.1	74741	76179	R	encoded by transcript ACA1_185040A; uncharacterized protein	complement(join(74741..74904,74993..75111,75241..75682,75819..75933,76069..76179))	Acanthamoeba castellanii str. Neff	14921181
ACA1_185050	CDS	ACA1_185050	NW_004457568.1	76618	78144	D	encoded by transcript ACA1_185050A; carbonate dehydratase, eukaryotictype domain containing protein	join(76618..76737,76901..77049,77241..77354,77432..77513,77586..77717,77835..77915,77983..78144)	Acanthamoeba castellanii str. Neff	14921182
ACA1_185160	CDS	ACA1_185160	NW_004457568.1	78577	80076	D	encoded by transcript ACA1_185160A; uncharacterized protein	78577..80076	Acanthamoeba castellanii str. Neff	14921183
ACA1_185170	CDS	ACA1_185170	NW_004457568.1	80321	81229	D	encoded by transcript ACA1_185170A; imidazoleglycerolphosphate dehydratase	join(80321..80525,80651..80720,80791..80977,81098..81229)	Acanthamoeba castellanii str. Neff	14921184
ACA1_185180	CDS	ACA1_185180	NW_004457568.1	81424	82520	R	encoded by transcript ACA1_185180A; LIM domain containing protein	complement(join(81424..81511,81595..81730,81837..81927,82012..82109,82188..82258,82333..82520))	Acanthamoeba castellanii str. Neff	14921185
ACA1_185190	CDS	ACA1_185190	NW_004457568.1	83229	83585	R	encoded by transcript ACA1_185190A; uncharacterized protein	complement(join(83229..83316,83398..83585))	Acanthamoeba castellanii str. Neff	14921186
ACA1_185300	CDS	ACA1_185300	NW_004457568.1	86602	87055	D	encoded by transcript ACA1_185300A; uncharacterized protein	join(86602..86616,86666..87055)	Acanthamoeba castellanii str. Neff	14921187
ACA1_185310	CDS	ACA1_185310	NW_004457568.1	88368	90439	R	encoded by transcript ACA1_185310A; serine/threonine protein kinase	complement(join(88368..88736,88839..89044,89123..89539,89629..90439))	Acanthamoeba castellanii str. Neff	14921188
ACA1_185320	CDS	ACA1_185320	NW_004457568.1	92736	95739	D	encoded by transcript ACA1_185320A; uncharacterized protein	join(92736..92795,92908..93644,93741..93897,93964..94324,94441..94680,94801..95050,95072..95157,95240..95739)	Acanthamoeba castellanii str. Neff	14921239
ACA1_185330	CDS	ACA1_185330	NW_004457568.1	95845	96120	R	encoded by transcript ACA1_185330A; uncharacterized protein	complement(95845..96120)	Acanthamoeba castellanii str. Neff	14921189
ACA1_185340	CDS	ACA1_185340	NW_004457568.1	96507	97263	R	encoded by transcript ACA1_185340A; uncharacterized protein	complement(join(96507..96918,97031..97147,97229..97263))	Acanthamoeba castellanii str. Neff	14921190
ACA1_185460	CDS	ACA1_185460	NW_004457568.1	102850	104415	R	encoded by transcript ACA1_185460A; PKD domain containing protein	complement(join(102850..102894,102962..103144,103230..103428,103518..103714,103804..103903,104075..104244,104338..104415))	Acanthamoeba castellanii str. Neff	14921192
ACA1_185570	CDS	ACA1_185570	NW_004457568.1	107333	108832	R	encoded by transcript ACA1_185570A; Hypothetical protein	complement(join(<107333..107877,107999..108118,108191..108268,108350..108615,108690..108832))	Acanthamoeba castellanii str. Neff	14921193
ACA1_185580	CDS	ACA1_185580	NW_004457568.1	109411	112109	D	encoded by transcript ACA1_185580A; FYVE zinc finger domain containing protein	join(109411..109453,109549..109683,109852..109978,110092..110230,110352..110423,110548..110623,110716..110839,110934..111026,111094..111161,111237..111295,111372..111464,111552..111593,111691..111790,111877..112109)	Acanthamoeba castellanii str. Neff	14921194
ACA1_185590	CDS	ACA1_185590	NW_004457568.1	112258	114046	D	encoded by transcript ACA1_185590A; EF hand domain containing protein	join(112258..112338,112486..112555,112688..112827,112951..113022,113798..114046)	Acanthamoeba castellanii str. Neff	14921195
ACA1_185700	CDS	ACA1_185700	NW_004457568.1	114463	114814	D	encoded by transcript ACA1_185700A; EF hand domain containing protein	join(114463..114487,114557..114636,114707..114814)	Acanthamoeba castellanii str. Neff	14921196
ACA1_185710	CDS	ACA1_185710	NW_004457568.1	115470	116962	D	encoded by transcript ACA1_185710A; uncharacterized protein	join(115470..115575,115684..115798,116029..116186,116313..116962)	Acanthamoeba castellanii str. Neff	14921197
ACA1_185720	CDS	ACA1_185720	NW_004457568.1	117455	119177	D	encoded by transcript ACA1_185720A; uncharacterized protein	join(117455..117560,117720..117834,118050..118189,118378..118598,118665..119177)	Acanthamoeba castellanii str. Neff	14921198
ACA1_185730	CDS	ACA1_185730	NW_004457568.1	119271	121669	D	encoded by transcript ACA1_185730A; poly (ADPribose) glycohydrolase	join(119271..119409,119497..119667,119775..119920,120026..120097,120186..120297,120415..120599,120733..120788,120862..120987,121066..121241,121336..121503,121587..121669)	Acanthamoeba castellanii str. Neff	14921199
ACA1_185740	CDS	ACA1_185740	NW_004457568.1	121921	129683	R	encoded by transcript ACA1_185740A; proteasome activator subunit 4, putative	complement(join(121921..122052,122161..122309,122387..122516,122604..122700,122803..123380,123501..123660,123754..123859,123973..124234,124323..124440,124525..124714,124790..124864,124949..125215,125332..125400,125469..126101,126172..126596,126665..126756,126845..126921,126986..127240,127346..127457,127527..127637,127703..127870,127927..127972,128276..128349,128420..128505,128575..128712,128788..128960,129055..129222,129304..129683))	Acanthamoeba castellanii str. Neff	14921200
ACA1_185850	CDS	ACA1_185850	NW_004457568.1	132474	132926	R	encoded by transcript ACA1_185850A; acetyltransferase, GNAT superfamily protein	complement(132474..132926)	Acanthamoeba castellanii str. Neff	14921201
ACA1_185860	CDS	ACA1_185860	NW_004457568.1	133049	133411	R	encoded by transcript ACA1_185860A; thiol-disulfide oxidoreductase DCC, putative	complement(133049..133411)	Acanthamoeba castellanii str. Neff	14921202
ACA1_185870	CDS	ACA1_185870	NW_004457568.1	133620	137280	R	encoded by transcript ACA1_185870A; BTB/POZ domain containing protein	complement(join(<133620..134296,134379..134880,135006..135215,135299..135389,135461..135538,135632..135703,135776..135934,136005..136122,136181..136331,136371..136445,136529..136637,136723..136782,136850..137280))	Acanthamoeba castellanii str. Neff	14921203
ACA1_185880	CDS	ACA1_185880	NW_004457568.1	137352	137721	R	encoded by transcript ACA1_185880A; uncharacterized protein	complement(join(<137352..137515,137574..137721))	Acanthamoeba castellanii str. Neff	14921204
ACA1_185890	CDS	ACA1_185890	NW_004457568.1	138216	141406	D	encoded by transcript ACA1_185890A; uncharacterized protein	join(138216..138354,138465..138588,138690..138788,138875..140466,140557..141163,141253..141406)	Acanthamoeba castellanii str. Neff	14921205
ACA1_185910	CDS	ACA1_185910	NW_004457568.1	142572	143044	R	encoded by transcript ACA1_185910A; uncharacterized protein	complement(join(142572..142655,142772..142861,143015..143044))	Acanthamoeba castellanii str. Neff	14921207
ACA1_186020	CDS	ACA1_186020	NW_004457568.1	146299	147327	R	encoded by transcript ACA1_186020A; uncharacterized protein	complement(join(146299..147118,147218..147327))	Acanthamoeba castellanii str. Neff	14921208
ACA1_186030	CDS	ACA1_186030	NW_004457568.1	147764	150662	R	encoded by transcript ACA1_186030A; uncharacterized protein	complement(join(147764..150320,150436..150488,150564..150662))	Acanthamoeba castellanii str. Neff	14921209
ACA1_186050	CDS	ACA1_186050	NW_004457568.1	155546	159879	D	encoded by transcript ACA1_186050A; GAF domain containing protein	join(155546..155616,155687..155780,155859..156046,156153..156177,156210..156675,156744..157540,157657..157854,157929..158055,158139..158320,158516..159302,159405..159535,159652..159879)	Acanthamoeba castellanii str. Neff	14921211
ACA1_186060	CDS	ACA1_186060	NW_004457568.1	160049	161164	R	encoded by transcript ACA1_186060A; dual specificity phosphatase, catalytic domain containing protein	complement(join(160049..160412,160492..160727,160850..161033,161112..161164))	Acanthamoeba castellanii str. Neff	14921212
ACA1_186070	CDS	ACA1_186070	NW_004457568.1	161627	164480	R	encoded by transcript ACA1_186070A; ATPase/histidine kinase/DNA gyrase B/HSP90 domain containing protein	complement(join(161627..161833,161925..162025,162106..162392,162486..162625,162710..162881,162987..163056,163128..163262,163340..163441,163521..163703,163802..164480))	Acanthamoeba castellanii str. Neff	14921213
ACA1_186080	CDS	ACA1_186080	NW_004457568.1	165017	165419	D	encoded by transcript ACA1_186080A; uncharacterized protein	join(165017..165193,165204..165288,165403..165419)	Acanthamoeba castellanii str. Neff	14921214
ACA1_186090	CDS	ACA1_186090	NW_004457568.1	166147	167301	D	encoded by transcript ACA1_186090A; tyrosine phosphatase, putative	join(166147..166357,166456..166553,166714..166882,166983..167114,167201..167301)	Acanthamoeba castellanii str. Neff	14921215
ACA1_186200	CDS	ACA1_186200	NW_004457568.1	168330	171274	D	encoded by transcript ACA1_186200A; ATPase/histidine kinase/DNA gyrase B/HSP90 domain containing protein	join(168330..168467,168486..168927,169064..169246,169317..169418,169492..169635,169697..169766,169845..169978,170047..170087,170166..170293,170371..170587,170663..170750,170828..170940,171020..171274)	Acanthamoeba castellanii str. Neff	14921216
ACA1_186210	CDS	ACA1_186210	NW_004457568.1	172439	173628	D	encoded by transcript ACA1_186210A; tyrosine phosphataselike protein, putative	join(172439..172649,172761..172909,173014..173182,173312..173443,173528..173628)	Acanthamoeba castellanii str. Neff	14921217
ACA1_186220	CDS	ACA1_186220	NW_004457568.1	174800	175472	R	encoded by transcript ACA1_186220A; uncharacterized protein	complement(join(174800..175381,175449..175472))	Acanthamoeba castellanii str. Neff	14921218
ACA1_186330	CDS	ACA1_186330	NW_004457568.1	175660	176184	D	encoded by transcript ACA1_186330A; uncharacterized protein	175660..176184	Acanthamoeba castellanii str. Neff	14921219
ACA1_186340	CDS	ACA1_186340	NW_004457568.1	176616	179025	R	encoded by transcript ACA1_186340A; PH domain containing protein	complement(join(176616..176651,176889..176982,177072..177142,177253..177379,177470..178278,178431..178475,178571..178650,178728..179025))	Acanthamoeba castellanii str. Neff	14921220
ACA1_186350	CDS	ACA1_186350	NW_004457568.1	179212	181266	R	encoded by transcript ACA1_186350A; RhoGEF domain containing protein	complement(join(179212..179391,179471..179566,179647..179754,179844..180047,180405..180605,180622..180774,180786..180995,181063..181089,181177..181266))	Acanthamoeba castellanii str. Neff	14921221
ACA1_186670	CDS	ACA1_186670	NW_004457568.1	182701	185713	R	encoded by transcript ACA1_186670A; uncharacterized protein	complement(join(182701..182745,182790..182993,183097..183204,183309..183355,183455..183688,183743..184381,184446..184549,184661..184822,184839..185713))	Acanthamoeba castellanii str. Neff	14921223
ACA1_186680	CDS	ACA1_186680	NW_004457568.1	186001	187350	D	encoded by transcript ACA1_186680A; RhoGAP domain containing protein	join(186001..186181,186306..186389,186489..186623,186777..186916,187005..187142,187249..187350)	Acanthamoeba castellanii str. Neff	14921224
ACA1_186700	CDS	ACA1_186700	NW_004457568.1	193687	198009	D	encoded by transcript ACA1_186700A; ADPribosylation factor subfamily protein	join(193687..194110,194241..194360,194463..194534,194604..194675,194764..194847,194926..195027,195104..195152,195227..195265,195488..195566,195664..195723,195816..195975,196056..196130,196212..196277,196385..196456,196520..196605,196706..196742,196822..196896,196987..197063,197136..197200,197261..197306,197393..197483,197603..197695,197771..197854,197921..198009)	Acanthamoeba castellanii str. Neff	14921226
ACA1_186720	CDS	ACA1_186720	NW_004457568.1	200286	202155	D	encoded by transcript ACA1_186720A; MYND finger domain containing protein	join(200286..200390,200741..200841,200937..201055,201147..201603,201673..201787,201858..201984,202091..202155)	Acanthamoeba castellanii str. Neff	14921228
ACA1_186730	CDS	ACA1_186730	NW_004457568.1	202260	207611	D	encoded by transcript ACA1_186730A; ExportinT, putative	join(202260..202468,202562..202659,202756..202866,202962..203083,203189..203315,203426..203532,203650..203706,203782..203856,203920..203965,204062..204134,204243..204432,204533..204704,204946..205072,205149..205269,205374..205502,205583..205718,205797..205984,206015..206089,206183..206254,206368..206476,206546..206670,206787..206858,206923..207008,207088..207214,207287..207460,207558..207611)	Acanthamoeba castellanii str. Neff	14921229
ACA1_186740	CDS	ACA1_186740	NW_004457568.1	208020	209636	D	encoded by transcript ACA1_186740A; fatty acid desaturase subfamily protein	join(208020..208557,208777..209636)	Acanthamoeba castellanii str. Neff	14921230
ACA1_186750	CDS	ACA1_186750	NW_004457568.1	210202	211380	D	encoded by transcript ACA1_186750A; delta5 fatty acid desaturase	join(210202..210258,210922..211380)	Acanthamoeba castellanii str. Neff	14921231
ACA1_186860	CDS	ACA1_186860	NW_004457568.1	211644	212657	D	encoded by transcript ACA1_186860A; golgi family protein, putative	join(211644..211700,211800..211879,211968..212064,212254..212322,212421..212657)	Acanthamoeba castellanii str. Neff	14921232
ACA1_186870	CDS	ACA1_186870	NW_004457568.1	213998	216468	D	encoded by transcript ACA1_186870A; protein kinase domain containing protein	join(213998..214086,214143..214224,214307..214400,214498..214665,214802..214976,215074..215397,215481..216468)	Acanthamoeba castellanii str. Neff	14921233
ACA1_186880	CDS	ACA1_186880	NW_004457568.1	216618	218660	D	encoded by transcript ACA1_186880A; uncharacterized protein	join(216618..217814,217937..218074,218185..218215,218272..218660)	Acanthamoeba castellanii str. Neff	14921234
ACA1_186890	CDS	ACA1_186890	NW_004457568.1	218795	219025	D	encoded by transcript ACA1_186890A; uncharacterized protein	join(218795..218973,219010..219025)	Acanthamoeba castellanii str. Neff	14921235
ACA1_186900	CDS	ACA1_186900	NW_004457568.1	219084	220669	R	encoded by transcript ACA1_186900A; Synapsin, ATP binding domain containing protein	complement(join(219084..219202,219281..219364,219486..219661,219772..219860,219974..220157,220231..220450,220585..220669))	Acanthamoeba castellanii str. Neff	14921236
ACA1_186910	CDS	ACA1_186910	NW_004457568.1	221013	227422	D	encoded by transcript ACA1_186910A; BRCT domain containing protein, putative	join(221013..221192,221264..221370,221442..221641,221736..222754,222824..223054,223142..223289,223359..223633,223730..223855,226964..227422)	Acanthamoeba castellanii str. Neff	14921237
ACA1_187020	CDS	ACA1_187020	NW_004457568.1	227611	228087	R	encoded by transcript ACA1_187020A; uncharacterized protein	complement(227611..>228087)	Acanthamoeba castellanii str. Neff	14921238
ACA1_027490	CDS	ACA1_027490	NW_004457567.1	72	4227	R	encoded by transcript ACA1_027490A; calciumtranslocating P-type ATPase, PMCA-type, putative	complement(join(72..92,306..370,452..722,808..1095,1167..1472,1541..1774,1867..2340,2429..2634,2751..2834,2918..3010,3114..3246,3322..3410,3509..3593,3653..3813,3888..4227))	Acanthamoeba castellanii str. Neff	14921155
ACA1_027500	CDS	ACA1_027500	NW_004457567.1	4785	7169	R	encoded by transcript ACA1_027500A; uncharacterized protein	complement(join(4785..4916,4987..5199,5268..5358,5455..5711,5792..5956,6036..6133,6227..6377,6504..6658,6735..6883,6957..6976,7077..7169))	Acanthamoeba castellanii str. Neff	14921156
ACA1_027610	CDS	ACA1_027610	NW_004457567.1	10763	11302	D	encoded by transcript ACA1_027610A; uncharacterized protein	join(10763..10819,10932..11042,11117..11302)	Acanthamoeba castellanii str. Neff	14921152
ACA1_027620	CDS	ACA1_027620	NW_004457567.1	11614	12863	R	encoded by transcript ACA1_027620A; aurora kinase A, putative	complement(join(11614..11661,11727..12179,12254..12380,12529..12661,12731..12747,12838..12863))	Acanthamoeba castellanii str. Neff	14921153
ACA1_027630	CDS	ACA1_027630	NW_004457567.1	13380	13733	D	encoded by transcript ACA1_027630A; uncharacterized protein	join(13380..13538,13611..>13733)	Acanthamoeba castellanii str. Neff	14921154
ACA1_029840	CDS	ACA1_029840	NW_004457565.1	2062	4746	R	encoded by transcript ACA1_029840A; uncharacterized protein	complement(join(2062..2087,2098..2235,2386..2708,3019..3101,3200..3493,4150..4614,4741..4746))	Acanthamoeba castellanii str. Neff	14921151
ACA1_030050	CDS	ACA1_030050	NW_004457565.1	4932	5123	D	encoded by transcript ACA1_030050A; uncharacterized protein	<4932..>5123	Acanthamoeba castellanii str. Neff	14921143
ACA1_030060	CDS	ACA1_030060	NW_004457565.1	5160	7240	R	encoded by transcript ACA1_030060A; EGFlike domain containing protein	complement(join(5160..5201,5354..5807,5887..6052,6251..6478,6573..6735,6820..7222,7236..7240))	Acanthamoeba castellanii str. Neff	14921144
ACA1_030070	CDS	ACA1_030070	NW_004457565.1	7825	9052	D	encoded by transcript ACA1_030070A; uncharacterized protein	join(7825..7869,8029..8112,8204..8333,8456..8649,8783..9052)	Acanthamoeba castellanii str. Neff	14921145
ACA1_030080	CDS	ACA1_030080	NW_004457565.1	9118	13382	R	encoded by transcript ACA1_030080A; uncharacterized protein	complement(join(9118..10258,10357..10592,10698..11023,11091..11155,11248..13382))	Acanthamoeba castellanii str. Neff	14921146
ACA1_030200	CDS	ACA1_030200	NW_004457565.1	27013	28241	R	encoded by transcript ACA1_030200A; uncharacterized protein	complement(join(27013..27737,27809..27911,28011..28241))	Acanthamoeba castellanii str. Neff	14921148
ACA1_030210	CDS	ACA1_030210	NW_004457565.1	29452	30059	D	encoded by transcript ACA1_030210A; uncharacterized protein	join(<29452..29507,29618..30059)	Acanthamoeba castellanii str. Neff	14921149
ACA1_030220	CDS	ACA1_030220	NW_004457565.1	30077	34936	D	encoded by transcript ACA1_030220A; FGGAP repeat domain containing protein	join(30077..30248,30321..30548,30718..30883,30963..31416,31573..31857,32011..32224,32369..32605,32708..32884,33022..33651,33757..34406,34496..34812,34896..>34936)	Acanthamoeba castellanii str. Neff	14921150
ACA1_307240	CDS	ACA1_307240	NW_004457563.1	20	1085	R	encoded by transcript ACA1_307240A; uncharacterized protein	complement(join(<20..360,488..738,856..1085))	Acanthamoeba castellanii str. Neff	14921141
ACA1_307250	CDS	ACA1_307250	NW_004457563.1	1342	2009	R	encoded by transcript ACA1_307250A; Mss4 protein	complement(join(1342..1413,1549..1618,1735..1829,1944..2009))	Acanthamoeba castellanii str. Neff	14921142
ACA1_307260	CDS	ACA1_307260	NW_004457563.1	2480	9654	D	encoded by transcript ACA1_307260A; ankyrin repeat-containing protein	join(2480..2508,2808..3094,3794..3807,3879..3957,4042..4221,4329..4400,4524..4642,4735..4845,4972..5198,5312..5357,5502..5606,5725..5870,5958..6071,6171..6250,6328..6373,6474..6560,6665..6728,8291..8323,8431..8505,8623..8680,8790..8901,9007..9084,9157..9298,9433..9654)	Acanthamoeba castellanii str. Neff	14921128
ACA1_307470	CDS	ACA1_307470	NW_004457563.1	9803	11028	R	encoded by transcript ACA1_307470A; uncharacterized protein	complement(join(9803..9871,9964..10045,10167..10250,10366..10420,10567..10623,10710..11028))	Acanthamoeba castellanii str. Neff	14921129
ACA1_307480	CDS	ACA1_307480	NW_004457563.1	11551	14176	R	encoded by transcript ACA1_307480A; PHDfinger domain containing protein	complement(join(11551..11923,11992..12406,12477..12540,12649..12693,12792..12938,13039..13153,13218..13401,13484..13598,13703..13798,13871..13948,14123..14176))	Acanthamoeba castellanii str. Neff	14921130
ACA1_307490	CDS	ACA1_307490	NW_004457563.1	14990	17899	R	encoded by transcript ACA1_307490A; DnaJ domain containing protein	complement(join(14990..15094,15156..15239,15310..15413,15524..15693,15755..15813,15918..16035,16138..16238,16363..16470,16678..16802,16894..17008,17108..17382,17520..17637,17780..17899))	Acanthamoeba castellanii str. Neff	14921131
ACA1_307500	CDS	ACA1_307500	NW_004457563.1	18225	21218	D	encoded by transcript ACA1_307500A; alanine aminotransferase, mitochondrial, putative	join(18225..18327,18485..18525,18638..18767,18890..19146,19266..19343,19503..19610,19723..19893,20025..20143,20283..20382,20500..20643,20718..20859,20968..21053,21153..21218)	Acanthamoeba castellanii str. Neff	14921132
ACA1_307510	CDS	ACA1_307510	NW_004457563.1	21284	23108	R	encoded by transcript ACA1_307510A; uncharacterized protein	complement(join(21284..21462,21536..21548,21588..21664,21742..21865,21953..22031,22123..22175,22273..22393,22499..22656,22736..22849,22947..>23108))	Acanthamoeba castellanii str. Neff	14921133
ACA1_307520	CDS	ACA1_307520	NW_004457563.1	23477	26597	R	encoded by transcript ACA1_307520A; phenylalanine-tRNA ligase, B5 domain containing protein	complement(join(23477..24058,24162..24434,24515..24644,24722..24963,25075..25225,25327..25442,25597..25714,25874..25965,26034..26089,26543..26597))	Acanthamoeba castellanii str. Neff	14921134
ACA1_307530	CDS	ACA1_307530	NW_004457563.1	26733	28875	D	encoded by transcript ACA1_307530A; 2acylglycerol O-acyltransferase 2, putative	join(26733..26984,27135..27205,27297..27363,27447..27569,27661..27713,27802..27872,27970..28060,28179..28280,28402..28579,28708..28875)	Acanthamoeba castellanii str. Neff	14921135
ACA1_307540	CDS	ACA1_307540	NW_004457563.1	29451	32134	D	encoded by transcript ACA1_307540A; uncharacterized protein	join(29451..29680,29747..29768,29873..29976,30065..30248,30386..30475,30584..30786,30916..31009,31099..31224,31319..31480,31573..31812,31940..32134)	Acanthamoeba castellanii str. Neff	14921136
ACA1_307550	CDS	ACA1_307550	NW_004457563.1	32833	36229	D	encoded by transcript ACA1_307550A; Fbox domain containing protein	join(32833..33039,33119..33230,33300..33534,33822..34218,34345..34485,34602..34751,34875..34988,35133..35165,35208..35275,35393..35715,35925..36229)	Acanthamoeba castellanii str. Neff	14921137
ACA1_307560	CDS	ACA1_307560	NW_004457563.1	36446	38787	R	encoded by transcript ACA1_307560A; WD domain, G-beta repeat-containing protein	complement(join(36446..36501,36589..36743,36851..36959,37041..37191,37384..37455,37683..37747,37959..38070,38178..38265,38426..38484,38551..38787))	Acanthamoeba castellanii str. Neff	14921138
ACA1_307570	CDS	ACA1_307570	NW_004457563.1	39206	40935	R	encoded by transcript ACA1_307570A; uncharacterized protein	complement(join(39206..39372,39477..39528,39614..39724,39803..40030,40156..40935))	Acanthamoeba castellanii str. Neff	14921139
ACA1_307580	CDS	ACA1_307580	NW_004457563.1	41841	42951	R	encoded by transcript ACA1_307580A; uncharacterized protein	complement(join(41841..42640,42739..42882,42945..42951))	Acanthamoeba castellanii str. Neff	14921140
ACA1_320080	CDS	ACA1_320080	NW_004457561.1	162	1093	D	encoded by transcript ACA1_320080A; uncharacterized protein	join(162..437,493..1051,1071..1093)	Acanthamoeba castellanii str. Neff	14921124
ACA1_320090	CDS	ACA1_320090	NW_004457561.1	1310	2203	D	encoded by transcript ACA1_320090A; uncharacterized protein	join(1310..1381,1450..1511,1600..1706,1821..1939,2039..2203)	Acanthamoeba castellanii str. Neff	14921127
ACA1_320100	CDS	ACA1_320100	NW_004457561.1	3524	8324	D	encoded by transcript ACA1_320100A; uncharacterized protein	join(3524..3710,6768..6987,7050..7150,7239..7362,7453..7523,7634..7770,7983..8324)	Acanthamoeba castellanii str. Neff	14921125
ACA1_320310	CDS	ACA1_320310	NW_004457561.1	8987	9307	D	encoded by transcript ACA1_320310A; uncharacterized protein	join(8987..9013,9116..9307)	Acanthamoeba castellanii str. Neff	14921126
ACA1_320420	CDS	ACA1_320420	NW_004457561.1	14489	16900	R	encoded by transcript ACA1_320420A; uncharacterized protein	complement(join(<14489..14630,14733..14805,14932..15065,15126..15237,15325..15415,15427..15504,15545..15726,15834..15910,15980..16112,16199..16570,16735..>16900))	Acanthamoeba castellanii str. Neff	14921123
ACA1_012630	CDS	ACA1_012630	NW_004457559.1	3228	3677	D	encoded by transcript ACA1_012630A; uncharacterized protein	join(<3228..3383,3547..3635,3653..3677)	Acanthamoeba castellanii str. Neff	14921111
ACA1_012740	CDS	ACA1_012740	NW_004457559.1	4599	5929	D	encoded by transcript ACA1_012740A; Gprotein-coupled receptor (GPCR) family protein	join(4599..4711,4824..4907,4982..5175,5537..5627,5705..5782,5833..5929)	Acanthamoeba castellanii str. Neff	14921113
ACA1_012850	CDS	ACA1_012850	NW_004457559.1	6490	6946	D	encoded by transcript ACA1_012850A; FAD dependent oxidoreductase	join(6490..6628,6702..6946)	Acanthamoeba castellanii str. Neff	14921114
ACA1_012960	CDS	ACA1_012960	NW_004457559.1	12396	12876	R	encoded by transcript ACA1_012960A; uncharacterized protein	complement(join(<12396..12499,12580..12686,12758..12876))	Acanthamoeba castellanii str. Neff	14921115
ACA1_012970	CDS	ACA1_012970	NW_004457559.1	13090	14810	D	encoded by transcript ACA1_012970A; CBS domain containing protein	join(13090..13170,13238..13330,13406..13466,13573..13707,13797..13880,13975..14123,14194..14253,14317..14388,14469..14555,14637..14810)	Acanthamoeba castellanii str. Neff	14921116
ACA1_012980	CDS	ACA1_012980	NW_004457559.1	14923	16736	R	encoded by transcript ACA1_012980A; Endonuclease/Exonuclease/phosphatase, putative	complement(join(14923..15172,15249..15384,15476..15602,15667..15968,16053..16382,16463..16510,16532..16736))	Acanthamoeba castellanii str. Neff	14921117
ACA1_012990	CDS	ACA1_012990	NW_004457559.1	17332	20574	D	encoded by transcript ACA1_012990A; ATPdependent DNA helicase, RecQ subfamily protein	join(17332..17413,17487..17523,17583..17653,17912..17999,18073..18178,18242..18328,18498..18605,18672..18813,18920..19015,19073..19153,19234..19391,19464..19633,19740..20004,20066..20162,20272..20436,20501..20574)	Acanthamoeba castellanii str. Neff	14921120
ACA1_013000	CDS	ACA1_013000	NW_004457559.1	20739	21234	R	encoded by transcript ACA1_013000A; uncharacterized protein	complement(join(20739..21124,21186..21234))	Acanthamoeba castellanii str. Neff	14921122
ACA1_013010	CDS	ACA1_013010	NW_004457559.1	21513	21908	D	encoded by transcript ACA1_013010A; uncharacterized protein	join(21513..21630,21682..>21908)	Acanthamoeba castellanii str. Neff	14921121
ACA1_013120	CDS	ACA1_013120	NW_004457559.1	24373	25151	D	encoded by transcript ACA1_013120A; RasGEF	join(24373..24391,24529..24600,24707..24788,24902..25013,25116..25151)	Acanthamoeba castellanii str. Neff	14921118
ACA1_013230	CDS	ACA1_013230	NW_004457559.1	28547	28820	R	encoded by transcript ACA1_013230A; uncharacterized protein	complement(join(28547..28556,28573..28820))	Acanthamoeba castellanii str. Neff	14921112
ACA1_013240	CDS	ACA1_013240	NW_004457559.1	29357	30549	D	encoded by transcript ACA1_013240A; uncharacterized protein	join(29357..29670,29759..29918,29988..30139,30220..30365,30458..30549)	Acanthamoeba castellanii str. Neff	14921119
ACA1_111200	CDS	ACA1_111200	NW_004457554.1	92	1669	D	encoded by transcript ACA1_111200A; K+ channel tetramerization subfamily protein	join(<92..731,794..853,920..941,1276..1669)	Acanthamoeba castellanii str. Neff	14921110
ACA1_111310	CDS	ACA1_111310	NW_004457554.1	1842	3361	D	encoded by transcript ACA1_111310A; uncharacterized protein	join(1842..2486,2562..2756,2852..3361)	Acanthamoeba castellanii str. Neff	14920748
ACA1_111320	CDS	ACA1_111320	NW_004457554.1	3419	3822	R	encoded by transcript ACA1_111320A; uncharacterized protein	complement(join(3419..3761,3803..3822))	Acanthamoeba castellanii str. Neff	14920747
ACA1_111430	CDS	ACA1_111430	NW_004457554.1	5510	6312	D	encoded by transcript ACA1_111430A; pentapeptide repeat domain containing protein	join(5510..5621,5749..5871,5934..5993,6060..6119,6178..6237,6269..6312)	Acanthamoeba castellanii str. Neff	14920735
ACA1_111550	CDS	ACA1_111550	NW_004457554.1	15241	18247	R	encoded by transcript ACA1_111550A; 1,2alpha-mannosidase	complement(join(15241..15364,15450..15550,15642..15756,15855..15984,16117..16161,16254..16423,16542..16614,16690..16771,16849..16972,17062..17153,17266..17343,17425..17523,17645..17700,17811..17909,18121..18247))	Acanthamoeba castellanii str. Neff	14920737
ACA1_111560	CDS	ACA1_111560	NW_004457554.1	18402	20552	R	encoded by transcript ACA1_111560A; uncharacterized protein	complement(join(18402..18587,18726..18763,18839..18910,19010..19190,19423..19557,19641..19829,19921..20091,20222..20302,20391..20552))	Acanthamoeba castellanii str. Neff	14920738
ACA1_111670	CDS	ACA1_111670	NW_004457554.1	26266	27030	R	encoded by transcript ACA1_111670A; uncharacterized protein	complement(join(<26266..26345,26435..26605,26715..26795,26884..27030))	Acanthamoeba castellanii str. Neff	14920739
ACA1_111680	CDS	ACA1_111680	NW_004457554.1	28124	31839	D	encoded by transcript ACA1_111680A; RhoGAP domain containing protein	join(28124..28514,28685..28840,28868..28999,29081..29237,29350..29518,29607..29846,29949..30056,30162..30293,30413..30535,30619..30741,30814..30911,31040..31403,31492..31654,31739..31839)	Acanthamoeba castellanii str. Neff	14920740
ACA1_111690	CDS	ACA1_111690	NW_004457554.1	32056	34550	R	encoded by transcript ACA1_111690A; uncharacterized protein	complement(join(32056..32485,32691..32779,32931..33027,33137..33867,33924..34112,34260..34386,34480..34550))	Acanthamoeba castellanii str. Neff	14920741
ACA1_111700	CDS	ACA1_111700	NW_004457554.1	34612	35555	D	encoded by transcript ACA1_111700A; K+ channel tetramerization subfamily protein	join(34612..35257,35347..35555)	Acanthamoeba castellanii str. Neff	14920742
ACA1_111720	CDS	ACA1_111720	NW_004457554.1	38228	39631	D	encoded by transcript ACA1_111720A; uncharacterized protein	join(38228..38299,38366..38480,38582..38652,38751..39007,39095..39266,39343..39445,39522..39631)	Acanthamoeba castellanii str. Neff	14920744
ACA1_111730	CDS	ACA1_111730	NW_004457554.1	39732	40326	R	encoded by transcript ACA1_111730A; uncharacterized protein	complement(join(39732..40108,40293..40326))	Acanthamoeba castellanii str. Neff	14920745
ACA1_111740	CDS	ACA1_111740	NW_004457554.1	40730	41661	D	encoded by transcript ACA1_111740A; uncharacterized protein	join(40730..40777,40898..40951,41029..41082,41162..41380,41461..41661)	Acanthamoeba castellanii str. Neff	14920746
ACA1_111750	CDS	ACA1_111750	NW_004457554.1	41645	42614	R	encoded by transcript ACA1_111750A; uncharacterized protein	complement(join(41645..41966,42031..42184,42267..42389,42500..42614))	Acanthamoeba castellanii str. Neff	14920749
ACA1_111860	CDS	ACA1_111860	NW_004457554.1	43413	49341	R	encoded by transcript ACA1_111860A; uncharacterized protein	complement(join(<43413..43458,43569..43699,43833..43944,44143..44182,44295..44388,44494..44667,44785..44977,45073..45151,45249..45309,45538..45664,45739..45848,45980..46063,46144..46278,46370..46486,46610..46728,46833..46907,47079..47207,47251..47371,47492..47737,47834..48121,48316..48432,48586..48751,48868..49012,49123..49210,49285..49341))	Acanthamoeba castellanii str. Neff	14920750
ACA1_111870	CDS	ACA1_111870	NW_004457554.1	49494	57377	R	encoded by transcript ACA1_111870A; SNF2 family Nterminal domain containing protein	complement(join(49494..49621,49726..49880,49967..50339,50420..50490,50581..50861,50925..50964,51097..51212,51306..51401,51498..51609,51703..52142,52160..52204,52238..52386,52467..52572,52663..52875,52986..53314,53452..53652,53741..53843,53917..54135,54214..54330,54429..54890,54964..55277,55357..55535,55638..55688,55710..55824,55922..56131,56148..56199,56225..56731,56800..56934,57171..57265,57338..57377))	Acanthamoeba castellanii str. Neff	14920751
ACA1_111880	CDS	ACA1_111880	NW_004457554.1	57696	59147	D	encoded by transcript ACA1_111880A; uncharacterized protein	join(57696..57764,57923..58711,58821..58979,59061..59147)	Acanthamoeba castellanii str. Neff	14920752
ACA1_111890	CDS	ACA1_111890	NW_004457554.1	59353	60582	D	encoded by transcript ACA1_111890A; EF hand domain containing protein	join(59353..59413,59520..59685,59760..59833,59921..60144,60227..60284,60458..60582)	Acanthamoeba castellanii str. Neff	14920753
ACA1_111900	CDS	ACA1_111900	NW_004457554.1	60607	65031	D	encoded by transcript ACA1_111900A; global transcription factor, putative	join(60607..60687,60793..61113,61189..61335,61408..61614,61669..61857,61941..62105,62185..63148,63255..63493,63577..63741,63851..63994,64026..64138,64294..64489,64600..65031)	Acanthamoeba castellanii str. Neff	14920754
ACA1_111910	CDS	ACA1_111910	NW_004457554.1	65268	65746	D	encoded by transcript ACA1_111910A; histone h3, putative	join(65268..65505,65580..65746)	Acanthamoeba castellanii str. Neff	14920755
ACA1_111920	CDS	ACA1_111920	NW_004457554.1	66136	67126	D	encoded by transcript ACA1_111920A; uncharacterized protein	join(66136..66697,66823..66994,67081..67126)	Acanthamoeba castellanii str. Neff	14920756
ACA1_111930	CDS	ACA1_111930	NW_004457554.1	67641	68266	D	encoded by transcript ACA1_111930A; carbonsulfur lyase, putative	join(67641..67724,67837..67993,68139..68266)	Acanthamoeba castellanii str. Neff	14920757
ACA1_111940	CDS	ACA1_111940	NW_004457554.1	68497	68913	R	encoded by transcript ACA1_111940A; uncharacterized protein	complement(68497..68913)	Acanthamoeba castellanii str. Neff	14920758
ACA1_111950	CDS	ACA1_111950	NW_004457554.1	69505	73256	D	encoded by transcript ACA1_111950A; lipid transport family protein	join(69505..69586,69873..70017,70132..70342,70424..70550,70663..70853,70963..71061,71169..71407,71480..71731,71798..72012,72123..72566,72656..72772,72850..73073,73149..73256)	Acanthamoeba castellanii str. Neff	14920759
ACA1_111960	CDS	ACA1_111960	NW_004457554.1	73389	75722	R	encoded by transcript ACA1_111960A; ornithine cyclodeaminase	complement(join(73389..73541,73645..73770,73851..73906,74088..74198,74297..74414,74530..74591,74683..74776,74885..74970,75146..75245,75573..75722))	Acanthamoeba castellanii str. Neff	14920760
ACA1_111970	CDS	ACA1_111970	NW_004457554.1	76229	76630	D	encoded by transcript ACA1_111970A; sulfiredoxin 1	76229..76630	Acanthamoeba castellanii str. Neff	14920761
ACA1_111980	CDS	ACA1_111980	NW_004457554.1	76791	77700	D	encoded by transcript ACA1_111980A; EF hand domain containing protein	join(76791..76823,76865..76938,76955..77001,77130..77484,77565..77700)	Acanthamoeba castellanii str. Neff	14920762
ACA1_111990	CDS	ACA1_111990	NW_004457554.1	78170	79787	D	encoded by transcript ACA1_111990A; uncharacterized protein	join(78170..78656,78781..78900,79047..79121,79226..79285,79381..79787)	Acanthamoeba castellanii str. Neff	14920763
ACA1_112000	CDS	ACA1_112000	NW_004457554.1	80150	81978	D	encoded by transcript ACA1_112000A; RhoGAP domain containing protein	join(80150..80223,80342..80448,80543..80725,80859..80996,81078..81257,81390..81508,81600..81647,81742..81978)	Acanthamoeba castellanii str. Neff	14920764
ACA1_112010	CDS	ACA1_112010	NW_004457554.1	82488	83633	R	encoded by transcript ACA1_112010A; EF hand domain containing protein	complement(join(82488..82608,82707..82878,82994..83131,83359..83458,83469..83633))	Acanthamoeba castellanii str. Neff	14920765
ACA1_112020	CDS	ACA1_112020	NW_004457554.1	83824	87497	R	encoded by transcript ACA1_112020A; RhoGEF domain containing protein	complement(join(83824..83846,83933..84008,84088..84435,84540..84661,84731..84911,85165..85446,85562..85773,85853..87352,87434..87497))	Acanthamoeba castellanii str. Neff	14920766
ACA1_112030	CDS	ACA1_112030	NW_004457554.1	88011	89521	R	encoded by transcript ACA1_112030A; uncharacterized protein	complement(join(88011..88075,88190..88325,88412..88473,88575..88655,88785..88904,89064..89103,89187..89324,89510..89521))	Acanthamoeba castellanii str. Neff	14920767
ACA1_112040	CDS	ACA1_112040	NW_004457554.1	89859	95058	D	encoded by transcript ACA1_112040A; uncharacterized protein	join(89859..89950,90058..90128,90165..90281,90595..91019,91093..91426,91546..91655,91791..91860,92015..92065,92191..92379,92538..92753,92890..92948,93059..93140,93240..93340,93466..93553,93729..93950,93974..95058)	Acanthamoeba castellanii str. Neff	14920768
ACA1_112050	CDS	ACA1_112050	NW_004457554.1	95265	97132	D	encoded by transcript ACA1_112050A; variant sh3 domain containing protein	join(95265..96008,96179..96493,96618..96939,97038..97132)	Acanthamoeba castellanii str. Neff	14920769
ACA1_112060	CDS	ACA1_112060	NW_004457554.1	97445	98586	D	encoded by transcript ACA1_112060A; O-methyltransferase, putative	join(97445..97505,97607..97723,97784..97853,97931..97975,98146..98335,98446..98586)	Acanthamoeba castellanii str. Neff	14920770
ACA1_112070	CDS	ACA1_112070	NW_004457554.1	98738	99717	R	encoded by transcript ACA1_112070A; DnaJ	complement(join(98738..98942,98966..99717))	Acanthamoeba castellanii str. Neff	14920771
ACA1_112080	CDS	ACA1_112080	NW_004457554.1	100683	104401	D	encoded by transcript ACA1_112080A; uncharacterized protein	join(100683..101717,102432..103330,103435..103569,103678..104401)	Acanthamoeba castellanii str. Neff	14920772
ACA1_112090	CDS	ACA1_112090	NW_004457554.1	104798	107246	D	encoded by transcript ACA1_112090A; uncharacterized protein	join(104798..105019,105136..105281,105351..105435,105504..105654,105732..105795,105863..106310,106331..106496,106592..106753,106788..107203,107220..107246)	Acanthamoeba castellanii str. Neff	14920773
ACA1_112100	CDS	ACA1_112100	NW_004457554.1	108068	112292	D	encoded by transcript ACA1_112100A; BTB/POZ domain containing protein	join(108068..108437,108546..108593,108665..108733,108870..109016,109110..109259,109346..109495,109637..109738,109900..110018,110142..110220,110323..110452,110564..110959,111090..111424,111519..111695,111777..111897,111959..112034,112080..112292)	Acanthamoeba castellanii str. Neff	14920774
ACA1_112110	CDS	ACA1_112110	NW_004457554.1	112382	116179	D	encoded by transcript ACA1_112110A; glycosyl transferase	join(112382..112593,112695..113037,113171..113257,113347..113414,113529..113646,113753..113863,113935..114026,114138..114235,114361..114477,114617..114865,114934..115025,115119..115285,115414..115511,115649..115735,115838..115968,116024..116179)	Acanthamoeba castellanii str. Neff	14920775
ACA1_112120	CDS	ACA1_112120	NW_004457554.1	116968	117355	R	encoded by transcript ACA1_112120A; uncharacterized protein	complement(join(116968..117068,117214..117355))	Acanthamoeba castellanii str. Neff	14920776
ACA1_112130	CDS	ACA1_112130	NW_004457554.1	117600	121862	D	encoded by transcript ACA1_112130A; regulator of g protein signaling domain containing protein	join(117600..117613,117631..118538,118646..119123,119211..119366,119492..119579,119720..119793,119910..120007,120155..120320,120453..120679,120790..120931,121062..121140,121232..121357,121470..121862)	Acanthamoeba castellanii str. Neff	14920777
ACA1_112140	CDS	ACA1_112140	NW_004457554.1	121927	123663	R	encoded by transcript ACA1_112140A; HAD hydrolase, family IIA subfamily protein	complement(join(121927..121973,122066..122185,122280..122436,122592..122726,122849..122947,123047..123206,123323..123663))	Acanthamoeba castellanii str. Neff	14920778
ACA1_112150	CDS	ACA1_112150	NW_004457554.1	123798	129240	R	encoded by transcript ACA1_112150A; RasGEF domain containing protein	complement(join(123798..123963,124087..124158,124293..124531,124630..124788,124919..125062,125182..125259,125379..125589,125731..125812,125960..126121,126202..126697,126766..126931,127028..127098,127198..127373,127575..127665,127776..127856,127978..128049,128134..128226,128321..128390,128408..128451,128629..128789,128902..128947,129085..129240))	Acanthamoeba castellanii str. Neff	14920779
ACA1_112160	CDS	ACA1_112160	NW_004457554.1	130027	133057	D	encoded by transcript ACA1_112160A; dual specificity protein kinase	join(130027..130274,130362..130450,130541..130612,130722..130780,130874..130925,131103..131244,131312..131470,131589..131679,131795..131917,132049..132356,132462..132604,132840..133057)	Acanthamoeba castellanii str. Neff	14920780
ACA1_112170	CDS	ACA1_112170	NW_004457554.1	134113	136736	D	encoded by transcript ACA1_112170A; protein phosphatase 2C domain containing protein	join(134113..135162,135250..135342,135450..135547,135638..135762,135837..135964,136072..136236,136340..136471,136560..136736)	Acanthamoeba castellanii str. Neff	14920781
ACA1_112180	CDS	ACA1_112180	NW_004457554.1	137200	140275	D	encoded by transcript ACA1_112180A; major facilitator subfamily transporter	join(137200..137670,137771..137877,138008..138130,138263..138362,138475..138535,138612..138695,138799..138965,139089..139281,139384..139537,139665..139758,139878..140039,140192..140275)	Acanthamoeba castellanii str. Neff	14920782
ACA1_112190	CDS	ACA1_112190	NW_004457554.1	140418	141554	R	encoded by transcript ACA1_112190A; uncharacterized protein	complement(140418..141554)	Acanthamoeba castellanii str. Neff	14920783
ACA1_112200	CDS	ACA1_112200	NW_004457554.1	141991	145640	R	encoded by transcript ACA1_112200A; uncharacterized protein	complement(join(141991..142162,142252..142455,142566..143248,143325..143420,143530..143735,143820..144110,144199..144568,144810..144923,145164..145640))	Acanthamoeba castellanii str. Neff	14920784
ACA1_112210	CDS	ACA1_112210	NW_004457554.1	146646	148861	D	encoded by transcript ACA1_112210A; protein kinase domain containing protein	join(146646..146768,146919..146988,147161..147309,147402..147510,147614..147733,147862..148032,148301..148374,148489..148668,148799..148861)	Acanthamoeba castellanii str. Neff	14920785
ACA1_112320	CDS	ACA1_112320	NW_004457554.1	150455	151459	R	encoded by transcript ACA1_112320A; Kynurenine--oxoglutarate transaminase	complement(join(150455..150606,150708..150957,151084..151244,151318..151459))	Acanthamoeba castellanii str. Neff	14920786
ACA1_112430	CDS	ACA1_112430	NW_004457554.1	151709	153675	D	encoded by transcript ACA1_112430A; Casein kinase I	join(<151709..151817,151923..152042,152161..152331,152438..152622,152761..152834,152956..153135,153264..153354,153430..153675)	Acanthamoeba castellanii str. Neff	14920787
ACA1_112450	CDS	ACA1_112450	NW_004457554.1	155315	157724	R	encoded by transcript ACA1_112450A; Kynurenine Aminotransferase	complement(join(155315..155466,155680..155929,156055..156215,156295..156454,156558..156655,156757..156939,157021..157185,157276..157330,157391..157576,157677..157724))	Acanthamoeba castellanii str. Neff	14920789
ACA1_112460	CDS	ACA1_112460	NW_004457554.1	158034	158615	R	encoded by transcript ACA1_112460A; protective antigen 4D8, putative	complement(join(158034..158119,158180..158341,158405..158615))	Acanthamoeba castellanii str. Neff	14920790
ACA1_112470	CDS	ACA1_112470	NW_004457554.1	159013	160736	R	encoded by transcript ACA1_112470A; KH domain containing protein	complement(join(159013..159264,159326..159387,159470..159585,159701..159857,159978..160083,160155..160222,160301..160736))	Acanthamoeba castellanii str. Neff	14920791
ACA1_112480	CDS	ACA1_112480	NW_004457554.1	160921	161505	D	encoded by transcript ACA1_112480A; Fbox domain containing protein	160921..161505	Acanthamoeba castellanii str. Neff	14920792
ACA1_112490	CDS	ACA1_112490	NW_004457554.1	162067	162423	D	encoded by transcript ACA1_112490A; uncharacterized protein	join(162067..162183,162280..162423)	Acanthamoeba castellanii str. Neff	14920793
ACA1_112500	CDS	ACA1_112500	NW_004457554.1	163219	170380	D	encoded by transcript ACA1_112500A; TBC domain containing protein	join(163219..165987,166117..166228,166332..167717,167859..167956,168050..168325,168471..168722,168794..168901,169118..169207,169327..169410,169547..169645,169783..169906,169989..170380)	Acanthamoeba castellanii str. Neff	14920794
ACA1_112510	CDS	ACA1_112510	NW_004457554.1	171035	173533	R	encoded by transcript ACA1_112510A; sphingosine kinase	complement(join(171035..171402,171505..171673,171807..171927,172183..172303,172433..172498,172639..173533))	Acanthamoeba castellanii str. Neff	14920795
ACA1_112520	CDS	ACA1_112520	NW_004457554.1	174190	174666	D	encoded by transcript ACA1_112520A; uncharacterized protein	join(174190..174354,174448..174666)	Acanthamoeba castellanii str. Neff	14920796
ACA1_112530	CDS	ACA1_112530	NW_004457554.1	175053	179002	D	encoded by transcript ACA1_112530A; uncharacterized protein	join(175053..175132,175373..176300,176419..176974,177080..177136,177240..177393,177479..177689,177761..178003,178131..178259,178351..178493,178586..178763,178853..179002)	Acanthamoeba castellanii str. Neff	14920797
ACA1_112540	CDS	ACA1_112540	NW_004457554.1	179113	180778	R	encoded by transcript ACA1_112540A; Ubiquitinconjugating enzyme subfamily protein	complement(join(179113..179273,179381..179537,179660..179767,179897..180273,180466..180778))	Acanthamoeba castellanii str. Neff	14920798
ACA1_112550	CDS	ACA1_112550	NW_004457554.1	181435	182718	R	encoded by transcript ACA1_112550A; PH domain containing protein	complement(join(181435..181560,181672..181779,181891..182126,182267..182282,182377..182427,182513..182604,182706..182718))	Acanthamoeba castellanii str. Neff	14920799
ACA1_112560	CDS	ACA1_112560	NW_004457554.1	182990	185386	D	encoded by transcript ACA1_112560A; uncharacterized protein	join(182990..183467,183547..183740,183857..183906,184031..184209,184282..184428,184514..184611,184706..184846,184952..185051,185151..185386)	Acanthamoeba castellanii str. Neff	14920800
ACA1_112570	CDS	ACA1_112570	NW_004457554.1	185491	190212	R	encoded by transcript ACA1_112570A; myosin light chain kinase	complement(join(185491..185626,185837..185969,186075..186260,186353..186598,186683..186790,186933..187021,187118..187225,187354..187422,187600..188012,188079..188170,188222..188360,188481..188563,188648..189144,189327..189457,189603..189670,189804..190212))	Acanthamoeba castellanii str. Neff	14920801
ACA1_112580	CDS	ACA1_112580	NW_004457554.1	190547	193008	D	encoded by transcript ACA1_112580A; nuclear pore glycoprotein p62, putative	join(190547..190550,190681..190986,190999..191736,191829..191867,191980..192125,192216..192320,192435..192526,192618..192732,192838..193008)	Acanthamoeba castellanii str. Neff	14920802
ACA1_112590	CDS	ACA1_112590	NW_004457554.1	193242	195737	D	encoded by transcript ACA1_112590A; WH2 motif domain containing protein	join(193242..194147,194264..194738,194854..194944,195000..195151,195217..195528,195607..195737)	Acanthamoeba castellanii str. Neff	14920803
ACA1_112600	CDS	ACA1_112600	NW_004457554.1	195837	196121	R	encoded by transcript ACA1_112600A; uncharacterized protein	complement(join(195837..195925,195992..196121))	Acanthamoeba castellanii str. Neff	14920804
ACA1_112610	CDS	ACA1_112610	NW_004457554.1	196282	199008	R	encoded by transcript ACA1_112610A; amidohydrolase family protein	complement(join(196282..196431,196504..196585,196682..196980,197100..197196,197296..197367,197459..197562,197698..197853,197924..198097,198220..198321,198443..198587,198697..198856,198936..199008))	Acanthamoeba castellanii str. Neff	14920805
ACA1_112620	CDS	ACA1_112620	NW_004457554.1	199222	200795	D	encoded by transcript ACA1_112620A; uncharacterized protein	join(199222..199686,199786..200481,200571..200795)	Acanthamoeba castellanii str. Neff	14920806
ACA1_112640	CDS	ACA1_112640	NW_004457554.1	202708	205405	D	encoded by transcript ACA1_112640A; MBOAT family protein	join(202708..202863,202989..203111,203197..203353,203494..203838,203937..203989,204133..204258,204409..204458,204531..204614,204808..204864,204949..205045,205107..205170,205260..205405)	Acanthamoeba castellanii str. Neff	14920808
ACA1_112650	CDS	ACA1_112650	NW_004457554.1	205483	206677	R	encoded by transcript ACA1_112650A; nicotinamide nmethyltransferase	complement(join(205483..205677,205774..206040,206120..206186,206292..206403,206506..206677))	Acanthamoeba castellanii str. Neff	14920809
ACA1_112660	CDS	ACA1_112660	NW_004457554.1	207166	211664	D	encoded by transcript ACA1_112660A; K+ channel tetramerization domain containing protein	join(207166..208469,208557..210662,210738..211081,211202..211296,211533..211664)	Acanthamoeba castellanii str. Neff	14920810
ACA1_112670	CDS	ACA1_112670	NW_004457554.1	212082	212448	R	encoded by transcript ACA1_112670A; uncharacterized protein	complement(join(212082..212291,212398..212448))	Acanthamoeba castellanii str. Neff	14920811
ACA1_112780	CDS	ACA1_112780	NW_004457554.1	212989	213499	D	encoded by transcript ACA1_112780A; uncharacterized protein	join(212989..213158,213262..213499)	Acanthamoeba castellanii str. Neff	14920812
ACA1_112790	CDS	ACA1_112790	NW_004457554.1	213911	215034	R	encoded by transcript ACA1_112790A; uncharacterized protein	complement(join(213911..214120,214210..214306,214435..214523,214605..214726,214836..215034))	Acanthamoeba castellanii str. Neff	14920813
ACA1_112800	CDS	ACA1_112800	NW_004457554.1	215125	216676	R	encoded by transcript ACA1_112800A; uncharacterized protein	complement(join(215125..215219,215304..215412,215503..215552,215626..215762,215862..216159,216258..216420,216530..216676))	Acanthamoeba castellanii str. Neff	14920814
ACA1_112810	CDS	ACA1_112810	NW_004457554.1	217453	223115	D	encoded by transcript ACA1_112810A; protein kinase domain containing protein	join(217453..217908,218137..218315,218379..218559,218632..220005,220098..220196,220270..220364,220483..220723,220804..220946,221048..221225,221347..221511,221641..221860,221952..222065,222199..222314,222414..222549,222658..222750,222834..222919,223014..223115)	Acanthamoeba castellanii str. Neff	14920815
ACA1_112820	CDS	ACA1_112820	NW_004457554.1	223535	224292	R	encoded by transcript ACA1_112820A; peptidyltRNA hydrolase	complement(join(223535..223584,223644..224292))	Acanthamoeba castellanii str. Neff	14920816
ACA1_112830	CDS	ACA1_112830	NW_004457554.1	225144	227958	R	encoded by transcript ACA1_112830A; uncharacterized protein	complement(join(225144..225152,225181..225300,225447..225471,225558..225646,225740..225861,225983..226230,226268..226361,226465..226573,226680..226729,226815..226954,227026..227305,227359..227533,227644..227776,227918..227958))	Acanthamoeba castellanii str. Neff	14920817
ACA1_112840	CDS	ACA1_112840	NW_004457554.1	228184	230217	R	encoded by transcript ACA1_112840A; uncharacterized protein	complement(join(228184..229797,230014..230217))	Acanthamoeba castellanii str. Neff	14920818
ACA1_112850	CDS	ACA1_112850	NW_004457554.1	231074	234899	D	encoded by transcript ACA1_112850A; trehalosephosphatase	join(231074..231317,231387..231452,231552..231755,231857..232018,232077..232225,232256..232453,232552..232685,232759..232911,233000..233077,233177..233275,233359..233511,233592..233776,233878..234061,234185..234321,234400..234480,234569..234641,234731..234899)	Acanthamoeba castellanii str. Neff	14920819
ACA1_112860	CDS	ACA1_112860	NW_004457554.1	235101	235712	R	encoded by transcript ACA1_112860A; EF hand domain containing protein	complement(join(235101..235298,235380..235712))	Acanthamoeba castellanii str. Neff	14920820
ACA1_112870	CDS	ACA1_112870	NW_004457554.1	235895	237292	D	encoded by transcript ACA1_112870A; nicotinamide nmethyltransferase	join(235895..236057,236149..236260,236387..236453,236556..236660,236803..236964,237083..237292)	Acanthamoeba castellanii str. Neff	14920821
ACA1_112880	CDS	ACA1_112880	NW_004457554.1	237862	239527	R	encoded by transcript ACA1_112880A; guanine nucleotidebinding protein alpha-1 subunit	complement(join(237862..238050,238151..238324,238415..238523,238638..238766,238859..239013,239103..239281,239395..239527))	Acanthamoeba castellanii str. Neff	14920822
ACA1_112890	CDS	ACA1_112890	NW_004457554.1	239930	242810	R	encoded by transcript ACA1_112890A; Sphingosine1-phosphate lyase, putative	complement(join(239930..240098,240198..240386,240492..240588,240835..240958,241057..241142,241263..241404,241524..241631,241731..241740,241807..241910,242058..242189,242358..242620,242726..242810))	Acanthamoeba castellanii str. Neff	14920823
ACA1_112900	CDS	ACA1_112900	NW_004457554.1	243141	244613	D	encoded by transcript ACA1_112900A; sodium/calcium exchanger protein	join(243141..243378,243439..243521,243617..243803,243904..244034,244120..244284,244374..244613)	Acanthamoeba castellanii str. Neff	14920824
ACA1_112910	CDS	ACA1_112910	NW_004457554.1	244726	246942	D	encoded by transcript ACA1_112910A; tetratricopeptide repeat domain containing protein	join(244726..244977,245108..245144,245226..245324,245456..245602,245685..245784,245865..245969,246063..246148,246230..246300,246443..246539,246608..246728,246831..246942)	Acanthamoeba castellanii str. Neff	14920825
ACA1_112920	CDS	ACA1_112920	NW_004457554.1	247304	249457	D	encoded by transcript ACA1_112920A; base excision DNA repair protein, HhHGPD subfamily protein	join(247304..247475,247579..247686,247779..247875,247967..248075,248145..248267,248391..248535,248616..248704,248792..248882,248979..249457)	Acanthamoeba castellanii str. Neff	14920826
ACA1_112930	CDS	ACA1_112930	NW_004457554.1	249527	250725	R	encoded by transcript ACA1_112930A; uncharacterized protein	complement(join(249527..249625,249734..249874,249987..250235,250365..250441,250587..250725))	Acanthamoeba castellanii str. Neff	14920827
ACA1_112940	CDS	ACA1_112940	NW_004457554.1	250775	251907	R	encoded by transcript ACA1_112940A; uncharacterized protein	complement(join(250775..250780,250908..251039,251135..251294,251442..251557,251656..251907))	Acanthamoeba castellanii str. Neff	14920828
ACA1_112950	CDS	ACA1_112950	NW_004457554.1	252087	257001	R	encoded by transcript ACA1_112950A; RasGEF domain containing protein	complement(join(252087..252182,252306..252412,252521..252614,252687..252842,252945..253133,253217..253324,253410..253478,253563..253724,253804..253952,254019..254110,254203..254337,254429..254809,254918..254962,255030..255166,255249..255359,255474..255644,255720..255877,256017..257001))	Acanthamoeba castellanii str. Neff	14920829
ACA1_112960	CDS	ACA1_112960	NW_004457554.1	257167	258718	D	encoded by transcript ACA1_112960A; deoxyhypusine hydroxylase	join(257167..257350,257497..257630,257720..257865,257931..258096,258174..258278,258384..258528,258627..258718)	Acanthamoeba castellanii str. Neff	14920830
ACA1_112970	CDS	ACA1_112970	NW_004457554.1	259026	261181	D	encoded by transcript ACA1_112970A; uncharacterized protein	join(259026..259089,259167..259267,259468..259652,259841..259906,259977..260165,260289..260367,260470..260712,260784..260906,261044..261181)	Acanthamoeba castellanii str. Neff	14920831
ACA1_112980	CDS	ACA1_112980	NW_004457554.1	261328	267888	D	encoded by transcript ACA1_112980A; protein kinase	join(261328..261510,261637..261715,261860..261901,262026..262297,262432..262494,262573..262621,262726..262753,262859..262948,263072..263195,263382..263492,263581..263651,263747..263847,263928..263983,264194..264400,264551..264656,264870..264952,265060..265143,265396..265526,265617..265749,265900..265978,266061..266134,266234..266420,266547..266614,266790..266871,267013..267091,267274..267463,267552..267732,267818..267888)	Acanthamoeba castellanii str. Neff	14920832
ACA1_113190	CDS	ACA1_113190	NW_004457554.1	268708	269996	D	encoded by transcript ACA1_113190A; uncharacterized protein	join(268708..268902,268999..269130,269264..269365,269458..269564,269582..269996)	Acanthamoeba castellanii str. Neff	14920833
ACA1_113200	CDS	ACA1_113200	NW_004457554.1	270140	270931	R	encoded by transcript ACA1_113200A; solute carrier family protein	complement(join(270140..270175,270212..270370,270485..270639,270775..270827,270891..270931))	Acanthamoeba castellanii str. Neff	14920834
ACA1_113310	CDS	ACA1_113310	NW_004457554.1	271098	271406	D	encoded by transcript ACA1_113310A; uncharacterized protein	<271098..271406	Acanthamoeba castellanii str. Neff	14920835
ACA1_113420	CDS	ACA1_113420	NW_004457554.1	273363	273521	D	encoded by transcript ACA1_113420A; uncharacterized protein	273363..273521	Acanthamoeba castellanii str. Neff	14920836
ACA1_113430	CDS	ACA1_113430	NW_004457554.1	274010	274396	R	encoded by transcript ACA1_113430A; uncharacterized protein	complement(274010..274396)	Acanthamoeba castellanii str. Neff	14920837
ACA1_113440	CDS	ACA1_113440	NW_004457554.1	274558	277351	D	encoded by transcript ACA1_113440A; uncharacterized protein	join(274558..274743,274854..275010,275201..275370,275492..275550,275787..275843,275950..275976,276135..276245,276357..276420,276531..276640,276823..277101,277222..277351)	Acanthamoeba castellanii str. Neff	14920838
ACA1_113450	CDS	ACA1_113450	NW_004457554.1	277880	278737	D	encoded by transcript ACA1_113450A; uncharacterized protein	277880..278737	Acanthamoeba castellanii str. Neff	14920839
ACA1_113460	CDS	ACA1_113460	NW_004457554.1	279007	282276	R	encoded by transcript ACA1_113460A; leucine rich repeat domain containing protein	complement(join(279007..279121,279276..279420,279545..279662,279771..279871,280016..280169,280293..280494,280646..280761,280924..281076,281240..281455,281560..281700,281887..282028,282107..282276))	Acanthamoeba castellanii str. Neff	14920840
ACA1_113470	CDS	ACA1_113470	NW_004457554.1	282595	287517	R	encoded by transcript ACA1_113470A; uncharacterized protein	complement(join(282595..282742,282766..283538,283653..283722,283885..284131,284299..284443,284609..284758,284881..285132,285252..285516,285687..285726,285870..285923,286020..286151,286261..286407,286540..286608,286743..286776,286886..286980,287096..287190,287309..287517))	Acanthamoeba castellanii str. Neff	14920841
ACA1_113480	CDS	ACA1_113480	NW_004457554.1	287692	293487	R	encoded by transcript ACA1_113480A; RhoGAP domain containing protein	complement(join(287692..287838,287971..288166,288239..288333,288412..288459,288568..288981,288994..289042,289172..289316,289493..289716,289811..289945,290212..290334,290508..290620,290831..291252,291397..291484,291679..291828,291932..292095,292357..292409,292684..292942,293064..293487))	Acanthamoeba castellanii str. Neff	14920842
ACA1_113490	CDS	ACA1_113490	NW_004457554.1	293756	297186	R	encoded by transcript ACA1_113490A; uncharacterized protein	complement(join(293756..293914,294055..294158,294363..294422,294532..294625,294776..294835,294992..295110,295258..295300,295464..295569,295694..295777,295873..295920,296038..296110,296221..296279,296421..296515,296607..296719,296787..297186))	Acanthamoeba castellanii str. Neff	14920843
ACA1_113500	CDS	ACA1_113500	NW_004457554.1	300313	302370	D	encoded by transcript ACA1_113500A; uncharacterized protein	300313..302370	Acanthamoeba castellanii str. Neff	14920844
ACA1_113510	CDS	ACA1_113510	NW_004457554.1	302954	307882	D	encoded by transcript ACA1_113510A; Adaptin domain containing protein	join(302954..303246,303465..303512,303594..303837,303925..304104,304242..304335,304477..304529,304809..305048,305172..305402,305509..305710,305902..306525,306744..307027,307126..307334,307439..307563,307737..307882)	Acanthamoeba castellanii str. Neff	14920845
ACA1_113520	CDS	ACA1_113520	NW_004457554.1	308002	308655	R	encoded by transcript ACA1_113520A; Oraov1 protein	complement(join(308002..308322,308395..308655))	Acanthamoeba castellanii str. Neff	14920846
ACA1_113530	CDS	ACA1_113530	NW_004457554.1	309048	310774	D	encoded by transcript ACA1_113530A; isopentenyltransferase	join(309048..309179,309359..309519,309570..309600,309686..309815,309995..310070,310188..310263,310338..310396,310456..310774)	Acanthamoeba castellanii str. Neff	14920847
ACA1_113540	CDS	ACA1_113540	NW_004457554.1	313230	314996	R	encoded by transcript ACA1_113540A; SCPlike extracellular subfamily protein	complement(join(313230..313249,313356..313580,313659..313799,313874..314042,314080..314179,314265..314491,314619..314829,314914..314996))	Acanthamoeba castellanii str. Neff	14920848
ACA1_113550	CDS	ACA1_113550	NW_004457554.1	315138	316034	R	encoded by transcript ACA1_113550A; uncharacterized protein	complement(join(315138..315464,315580..315629,315812..316034))	Acanthamoeba castellanii str. Neff	14920849
ACA1_113560	CDS	ACA1_113560	NW_004457554.1	316125	322352	R	encoded by transcript ACA1_113560A; PH domain containing protein	complement(join(316125..317612,317681..317759,317915..318059,318162..318267,318424..319114,319289..319472,319686..319767,319997..320076,320327..320418,320675..320802,321018..321125,321312..321431,321592..321720,321869..322062,322226..322352))	Acanthamoeba castellanii str. Neff	14920850
ACA1_113570	CDS	ACA1_113570	NW_004457554.1	322697	323843	R	encoded by transcript ACA1_113570A; uncharacterized protein	complement(join(322697..322833,322844..322902,323050..323176,323232..323310,323489..323596,323673..323843))	Acanthamoeba castellanii str. Neff	14920851
ACA1_113580	CDS	ACA1_113580	NW_004457554.1	324359	325352	R	encoded by transcript ACA1_113580A; GTP binding protein	complement(join(324359..324523,324680..324781,324803..324903,324973..325042,325143..325352))	Acanthamoeba castellanii str. Neff	14920852
ACA1_113590	CDS	ACA1_113590	NW_004457554.1	325900	327863	D	encoded by transcript ACA1_113590A; Inositol-hexakisphosphate kinase	join(325900..326713,326856..326909,327050..327129,327279..327863)	Acanthamoeba castellanii str. Neff	14920853
ACA1_113600	CDS	ACA1_113600	NW_004457554.1	328280	330109	D	encoded by transcript ACA1_113600A; CBS domain containing protein	join(328280..328492,328612..328668,328785..328866,328929..329049,329201..329459,329578..329736,329837..330109)	Acanthamoeba castellanii str. Neff	14920854
ACA1_113610	CDS	ACA1_113610	NW_004457554.1	330282	332805	R	encoded by transcript ACA1_113610A; transcriptional regulator, SARP family protein	complement(join(330282..330836,331015..331149,331507..331658,331806..331967,332147..332312,332451..332491,332670..332805))	Acanthamoeba castellanii str. Neff	14920855
ACA1_113620	CDS	ACA1_113620	NW_004457554.1	333031	335140	R	encoded by transcript ACA1_113620A; divergent AAA domain containing protein	complement(join(333031..333308,333362..333457,333503..333718,333870..334008,334177..334247,334450..335140))	Acanthamoeba castellanii str. Neff	14920856
ACA1_113630	CDS	ACA1_113630	NW_004457554.1	336385	337524	D	encoded by transcript ACA1_113630A; uncharacterized protein	join(336385..337222,337343..337524)	Acanthamoeba castellanii str. Neff	14920857
ACA1_113640	CDS	ACA1_113640	NW_004457554.1	339639	342196	D	encoded by transcript ACA1_113640A; uncharacterized protein	join(339639..339837,340108..340549,340592..340727,340803..341169,341400..341615,341745..342196)	Acanthamoeba castellanii str. Neff	14920858
ACA1_113650	CDS	ACA1_113650	NW_004457554.1	342572	343682	D	encoded by transcript ACA1_113650A; uncharacterized protein	join(342572..342687,342817..343048,343173..343300,343385..343682)	Acanthamoeba castellanii str. Neff	14920859
ACA1_113660	CDS	ACA1_113660	NW_004457554.1	343819	344837	R	encoded by transcript ACA1_113660A; uncharacterized protein	complement(join(343819..343997,344125..344264,344411..344577,344673..344745,344758..344837))	Acanthamoeba castellanii str. Neff	14920860
ACA1_113670	CDS	ACA1_113670	NW_004457554.1	344918	346979	R	encoded by transcript ACA1_113670A; uncharacterized protein	complement(join(344918..345171,345292..345366,345569..345611,345662..345796,345920..346195,346391..346446,346556..346979))	Acanthamoeba castellanii str. Neff	14920861
ACA1_113680	CDS	ACA1_113680	NW_004457554.1	347123	350591	R	encoded by transcript ACA1_113680A; peptidase M20, putative	complement(join(347123..347296,347497..347553,347624..347725,347911..348092,348217..348301,348410..348603,348819..348896,349060..349159,349523..349628,349795..349865,350147..350233,350372..350432,350539..350591))	Acanthamoeba castellanii str. Neff	14920862
ACA1_113700	CDS	ACA1_113700	NW_004457554.1	355597	357807	R	encoded by transcript ACA1_113700A; Nucleotidesugar transporter	complement(join(355597..355802,355922..355993,356096..356301,356531..356637,356747..356803,356905..357040,357203..357299,357687..357807))	Acanthamoeba castellanii str. Neff	14920864
ACA1_113710	CDS	ACA1_113710	NW_004457554.1	358588	360267	D	encoded by transcript ACA1_113710A; SH3 domain containing protein	join(358588..358764,358842..358935,359021..359070,359210..359362,359457..359636,359745..359967,360053..360267)	Acanthamoeba castellanii str. Neff	14920865
ACA1_113720	CDS	ACA1_113720	NW_004457554.1	360584	361249	D	encoded by transcript ACA1_113720A; zinc finger, C3HC4 type (RING finger) domain containing protein	360584..361249	Acanthamoeba castellanii str. Neff	14920866
ACA1_113730	CDS	ACA1_113730	NW_004457554.1	361445	362280	D	encoded by transcript ACA1_113730A; uncharacterized protein	join(361445..361489,361753..362280)	Acanthamoeba castellanii str. Neff	14920867
ACA1_113740	CDS	ACA1_113740	NW_004457554.1	362632	363191	D	encoded by transcript ACA1_113740A; Fbox domain containing protein	join(362632..362720,362807..362964,363043..363191)	Acanthamoeba castellanii str. Neff	14920868
ACA1_113750	CDS	ACA1_113750	NW_004457554.1	363236	364728	D	encoded by transcript ACA1_113750A; uncharacterized protein	join(363236..363300,363441..363546,363829..363882,363987..364060,364176..364473,364582..364728)	Acanthamoeba castellanii str. Neff	14920869
ACA1_113760	CDS	ACA1_113760	NW_004457554.1	364796	365419	R	encoded by transcript ACA1_113760A; signal recognition particle 19 kDa protein	complement(join(364796..364929,365047..365143,365249..365419))	Acanthamoeba castellanii str. Neff	14920870
ACA1_113770	CDS	ACA1_113770	NW_004457554.1	365605	370759	D	encoded by transcript ACA1_113770A; sulfate permease subfamily protein	join(365605..365911,366020..366151,366259..366362,366519..366736,366875..367043,367152..367232,367479..367688,367799..367880,368020..368131,368245..368326,368420..368483,368598..368699,368863..368946,369022..369236,369322..369382,369450..369550,369680..369785,369855..369911,370060..370168,370298..370357,370426..370759)	Acanthamoeba castellanii str. Neff	14920871
ACA1_113780	CDS	ACA1_113780	NW_004457554.1	370905	372338	D	encoded by transcript ACA1_113780A; COP9 signalosome subunit 6, putative	join(370905..371190,371259..371347,371464..371695,371830..371922,372013..372113,372195..372338)	Acanthamoeba castellanii str. Neff	14920872
ACA1_113790	CDS	ACA1_113790	NW_004457554.1	372526	374418	D	encoded by transcript ACA1_113790A; purine nucleosidase	join(372526..372562,372643..372792,372924..373085,373176..373372,373438..373491,373631..373803,373883..373926,374027..374135,374232..374418)	Acanthamoeba castellanii str. Neff	14920873
ACA1_113800	CDS	ACA1_113800	NW_004457554.1	374477	376819	R	encoded by transcript ACA1_113800A; ABC2 type transporter superfamily protein	complement(join(374477..375099,375221..375977,376070..376819))	Acanthamoeba castellanii str. Neff	14920874
ACA1_113810	CDS	ACA1_113810	NW_004457554.1	377164	377966	R	encoded by transcript ACA1_113810A; uncharacterized protein	complement(join(377164..377568,377649..377966))	Acanthamoeba castellanii str. Neff	14920875
ACA1_113820	CDS	ACA1_113820	NW_004457554.1	378196	381258	R	encoded by transcript ACA1_113820A; ABC2 type transporter superfamily protein	complement(join(378196..378329,378396..378893,378977..379078,379194..379511,379584..379685,379789..379929,380085..380178,380525..380725,380740..381258))	Acanthamoeba castellanii str. Neff	14920876
ACA1_113830	CDS	ACA1_113830	NW_004457554.1	382752	385723	D	encoded by transcript ACA1_113830A; uncharacterized protein	join(382752..382807,382891..382983,383005..383343,383776..384107,384229..384385,384529..384615,384749..384902,385018..385147,385259..385474,385568..385605,385682..385723)	Acanthamoeba castellanii str. Neff	14920877
ACA1_113840	CDS	ACA1_113840	NW_004457554.1	385957	386938	D	encoded by transcript ACA1_113840A; dual specificity phosphatase	join(385957..386230,386356..386506,386619..386700,386783..386938)	Acanthamoeba castellanii str. Neff	14920878
ACA1_113850	CDS	ACA1_113850	NW_004457554.1	387015	387958	R	encoded by transcript ACA1_113850A; peptidemethionine (S)-S-oxide reductase	complement(join(387015..387080,387182..387282,387363..387422,387517..387612,387703..387832,387920..387958))	Acanthamoeba castellanii str. Neff	14920879
ACA1_113860	CDS	ACA1_113860	NW_004457554.1	388372	391139	D	encoded by transcript ACA1_113860A; acyloxyacyl hydrolase	join(388372..388539,388648..388749,388864..388966,389058..389186,389285..389376,389470..389601,389664..389734,389892..390126,390218..390316,390440..390558,390651..390882,391029..391139)	Acanthamoeba castellanii str. Neff	14920880
ACA1_113870	CDS	ACA1_113870	NW_004457554.1	391599	397302	D	encoded by transcript ACA1_113870A; CUB domain containing protein	join(391599..391704,391810..391942,392101..392225,392332..392445,392549..392641,392776..392913,393000..393189,393269..393324,393452..393544,393625..393671,393806..393861,393972..394111,394217..394303,394439..394569,394659..394793,394923..395088,395200..395339,395492..395599,395641..395648,395756..395824,396018..396188,396334..396412,396511..396587,396704..396807,396951..397111,397204..397302)	Acanthamoeba castellanii str. Neff	14920881
ACA1_113880	CDS	ACA1_113880	NW_004457554.1	397587	400601	R	encoded by transcript ACA1_113880A; uncharacterized protein	complement(join(397587..397647,397737..397824,397931..398244,398354..399220,399274..399649,399753..400260,400491..400601))	Acanthamoeba castellanii str. Neff	14920882
ACA1_113890	CDS	ACA1_113890	NW_004457554.1	401299	402092	R	encoded by transcript ACA1_113890A; uncharacterized protein	complement(join(401299..401877,401976..402092))	Acanthamoeba castellanii str. Neff	14920883
ACA1_113900	CDS	ACA1_113900	NW_004457554.1	403098	408324	D	encoded by transcript ACA1_113900A; leucine rich repeat domain containing protein	join(403098..403149,403455..404496,404592..404700,404813..405028,405146..405292,405399..405534,405606..405726,405740..406082,406179..406595,406682..406812,406915..407008,407100..407271,407373..407569,407650..407727,407805..407897,407981..408065,408164..408324)	Acanthamoeba castellanii str. Neff	14920884
ACA1_113910	CDS	ACA1_113910	NW_004457554.1	408530	415555	R	encoded by transcript ACA1_113910A; uncharacterized protein	complement(join(408530..408733,408816..408956,409036..409191,409303..409546,409641..409752,409827..410133,410267..410407,410510..410656,410772..410886,411003..411095,411167..411212,411380..411527,411620..411814,411933..412079,412186..412351,412428..412619,412996..413142,413258..413403,413511..413633,413720..413899,414030..414199,414337..414423,414504..414620,414734..414848,414915..415078,415157..415217,415382..415555))	Acanthamoeba castellanii str. Neff	14920885
ACA1_113920	CDS	ACA1_113920	NW_004457554.1	415654	417834	D	encoded by transcript ACA1_113920A; gephyrin, putative	join(415654..415755,415850..416014,416153..416421,416506..416612,416730..416896,416979..417144,417254..417396,417496..417603,417715..417834)	Acanthamoeba castellanii str. Neff	14920886
ACA1_113930	CDS	ACA1_113930	NW_004457554.1	417933	420272	R	encoded by transcript ACA1_113930A; domain found in dishevelled, egl-10, and pleckstrin domain containing protein	complement(join(417933..418176,418291..418502,418606..418859,418956..419185,419277..419376,419462..419589,419677..419989,420122..420272))	Acanthamoeba castellanii str. Neff	14920887
ACA1_113940	CDS	ACA1_113940	NW_004457554.1	420446	425538	R	encoded by transcript ACA1_113940A; WASH complex subunit 7 family protein	complement(join(420446..420989,421120..421242,421371..421492,421620..421919,422021..422179,422258..422410,422562..422654,422761..422946,423033..423167,423308..423944,424066..424202,424314..424434,424571..424905,425045..425304,425418..425538))	Acanthamoeba castellanii str. Neff	14920888
ACA1_113950	CDS	ACA1_113950	NW_004457554.1	425608	426172	D	encoded by transcript ACA1_113950A; uncharacterized protein	join(425608..425869,425969..426024,426101..426172)	Acanthamoeba castellanii str. Neff	14920889
ACA1_113970	CDS	ACA1_113970	NW_004457554.1	428467	429551	R	encoded by transcript ACA1_113970A; uncharacterized protein	complement(join(428467..429070,429184..429551))	Acanthamoeba castellanii str. Neff	14920891
ACA1_113980	CDS	ACA1_113980	NW_004457554.1	429812	430721	D	encoded by transcript ACA1_113980A; uncharacterized protein	join(429812..430013,430101..430486,430506..430721)	Acanthamoeba castellanii str. Neff	14920892
ACA1_113990	CDS	ACA1_113990	NW_004457554.1	430731	431582	R	encoded by transcript ACA1_113990A; DNA polymerase III, epsilon subunit	complement(join(430731..430803,430904..431004,431171..431234,431322..431412,431534..431582))	Acanthamoeba castellanii str. Neff	14920893
ACA1_114100	CDS	ACA1_114100	NW_004457554.1	433070	433563	R	encoded by transcript ACA1_114100A; uncharacterized protein	complement(join(433070..433110,433194..433563))	Acanthamoeba castellanii str. Neff	14920894
ACA1_114110	CDS	ACA1_114110	NW_004457554.1	433788	434834	D	encoded by transcript ACA1_114110A; uncharacterized protein	join(433788..434134,434194..434370,434381..434834)	Acanthamoeba castellanii str. Neff	14920895
ACA1_114120	CDS	ACA1_114120	NW_004457554.1	434857	435595	R	encoded by transcript ACA1_114120A; DNA polymerase III, epsilon subunit	complement(join(434857..434929,435010..435110,435230..435293,435381..435471,435547..435595))	Acanthamoeba castellanii str. Neff	14920896
ACA1_114130	CDS	ACA1_114130	NW_004457554.1	435842	437218	R	encoded by transcript ACA1_114130A; uncharacterized protein	complement(join(435842..435978,436108..436270,436378..436608,436649..436911,437086..437218))	Acanthamoeba castellanii str. Neff	14920897
ACA1_114140	CDS	ACA1_114140	NW_004457554.1	437627	438779	D	encoded by transcript ACA1_114140A; Ubox domain containing protein	join(437627..437785,437883..438040,438091..438166,438314..438509,438622..438779)	Acanthamoeba castellanii str. Neff	14920898
ACA1_114150	CDS	ACA1_114150	NW_004457554.1	438875	440905	R	encoded by transcript ACA1_114150A; Ergosterol biosynthesis ERG4/ERG24 family protein	complement(join(438875..439018,439120..439202,439331..439440,439513..439646,439755..439899,439967..440112,440212..440399,440547..440649,440807..440905))	Acanthamoeba castellanii str. Neff	14920899
ACA1_114160	CDS	ACA1_114160	NW_004457554.1	441109	442091	R	encoded by transcript ACA1_114160A; AIG1 family protein	complement(join(441109..441673,441745..442091))	Acanthamoeba castellanii str. Neff	14920900
ACA1_114270	CDS	ACA1_114270	NW_004457554.1	445142	447755	R	encoded by transcript ACA1_114270A; leucinezipper-like transcription regulator	complement(join(445142..445627,445736..445986,446088..446303,446380..447031,447151..447255,447681..447755))	Acanthamoeba castellanii str. Neff	14920901
ACA1_114300	CDS	ACA1_114300	NW_004457554.1	455934	458793	D	encoded by transcript ACA1_114300A; Poly(ADPribose) polymerase catalytic domain containing protein	join(455934..456081,456216..456367,456535..456606,456708..456761,456897..456986,457125..457248,457415..457504,457595..457686,457808..457950,458071..458183,458654..458793)	Acanthamoeba castellanii str. Neff	14920904
ACA1_114410	CDS	ACA1_114410	NW_004457554.1	459121	460694	D	encoded by transcript ACA1_114410A; uncharacterized protein	join(459121..459243,459392..459437,459667..459811,459880..460315,460405..460574,460649..460694)	Acanthamoeba castellanii str. Neff	14920905
ACA1_114420	CDS	ACA1_114420	NW_004457554.1	460775	463660	R	encoded by transcript ACA1_114420A; uncharacterized protein	complement(join(460775..460900,461172..461257,461374..461459,461492..461604,461713..461794,461896..461989,462148..462264,462400..462521,462667..462769,463117..463381,463490..463660))	Acanthamoeba castellanii str. Neff	14920906
ACA1_114430	CDS	ACA1_114430	NW_004457554.1	463771	470306	R	encoded by transcript ACA1_114430A; ABC2 type transporter superfamily protein	complement(join(463771..463887,463966..464126,464223..464467,464554..464692,464768..464957,465032..465088,465184..465324,465400..465620,465710..466041,466144..466328,466428..466618,466796..467200,467313..467331,467521..467580,467705..467830,467914..468173,468261..468378,468458..468666,468836..469049,469124..469398,469526..470003,470223..470306))	Acanthamoeba castellanii str. Neff	14920907
ACA1_114440	CDS	ACA1_114440	NW_004457554.1	470632	473179	R	encoded by transcript ACA1_114440A; peptidase M28, putative	complement(join(470632..470742,470860..471011,471098..471164,471252..471341,471431..471528,471630..471762,471847..471947,472073..472181,472296..472477,472652..472772,472865..472907,473037..473179))	Acanthamoeba castellanii str. Neff	14920908
ACA1_114450	CDS	ACA1_114450	NW_004457554.1	473477	476775	R	encoded by transcript ACA1_114450A; SH3 domain containing protein	complement(join(473477..473487,473587..473707,473817..473911,474031..474163,474293..474348,474455..474578,474661..474706,474791..474922,474992..475059,475157..475264,475339..475467,475578..475682,475878..475940,476073..476214,476354..476448,476558..476635,476740..476775))	Acanthamoeba castellanii str. Neff	14920909
ACA1_114460	CDS	ACA1_114460	NW_004457554.1	477139	477534	R	encoded by transcript ACA1_114460A; SNARE domain containing protein	complement(477139..477534)	Acanthamoeba castellanii str. Neff	14920910
ACA1_114470	CDS	ACA1_114470	NW_004457554.1	477987	483667	D	encoded by transcript ACA1_114470A; C2 domain containing protein	join(477987..478156,478252..478387,478455..478544,478658..478729,478794..478862,478937..479722,479781..480692,480789..480915,480997..481115,481213..481346,481485..481527,481611..481775,481800..481866,481994..482028,482226..482446,482529..482617,482770..482878,483015..483180,483254..483667)	Acanthamoeba castellanii str. Neff	14920911
ACA1_114480	CDS	ACA1_114480	NW_004457554.1	484009	485560	D	encoded by transcript ACA1_114480A; uncharacterized protein	join(484009..484383,484628..484684,484742..485560)	Acanthamoeba castellanii str. Neff	14920912
ACA1_114490	CDS	ACA1_114490	NW_004457554.1	485992	486522	D	encoded by transcript ACA1_114490A; uncharacterized protein	join(485992..486086,486164..486314,486421..486522)	Acanthamoeba castellanii str. Neff	14920913
ACA1_114500	CDS	ACA1_114500	NW_004457554.1	486621	488806	R	encoded by transcript ACA1_114500A; MACRO domain containing protein 1, putative	complement(join(486621..486753,486820..486959,487043..487243,487348..487494,487583..487740,487840..487925,487992..488806))	Acanthamoeba castellanii str. Neff	14920914
ACA1_114510	CDS	ACA1_114510	NW_004457554.1	489270	491192	D	encoded by transcript ACA1_114510A; kelch repeat protein	join(489270..489534,489612..489764,489927..490067,490178..490342,490426..490590,490688..490850,490982..491192)	Acanthamoeba castellanii str. Neff	14920915
ACA1_114520	CDS	ACA1_114520	NW_004457554.1	491597	493782	R	encoded by transcript ACA1_114520A; Hypothetical protein	complement(join(491597..491760,491904..492057,492171..492254,492311..492505,492630..492754,492867..492963,493083..493149,493239..493298,493374..493512,493593..493782))	Acanthamoeba castellanii str. Neff	14920916
ACA1_114530	CDS	ACA1_114530	NW_004457554.1	494371	502639	D	encoded by transcript ACA1_114530A; NB-ARC domain containing protein	join(494371..494676,494712..494972,495008..495236,495358..495598,495694..495884,496013..496169,496274..496358,496459..496608,496703..496999,497126..497441,497513..497733,497864..497978,498016..498718,498804..498997,499123..499409,499486..499601,499684..499762,499849..499971,500059..500128,500294..500571,500686..500877,501002..501075,501389..501551,501675..502380,502404..502639)	Acanthamoeba castellanii str. Neff	14920917
ACA1_114540	CDS	ACA1_114540	NW_004457554.1	502768	504527	R	encoded by transcript ACA1_114540A; carrier superfamily protein	complement(join(502768..502827,502900..503026,503153..503331,503457..503593,503725..503826,503930..504527))	Acanthamoeba castellanii str. Neff	14920918
ACA1_114550	CDS	ACA1_114550	NW_004457554.1	504887	508591	R	encoded by transcript ACA1_114550A; calponin	complement(join(504887..505066,505285..505403,505587..505811,505931..507506,507573..507901,507976..508591))	Acanthamoeba castellanii str. Neff	14920919
ACA1_114560	CDS	ACA1_114560	NW_004457554.1	509235	513234	D	encoded by transcript ACA1_114560A; DNA replication licensing factor mcm6, putative	join(509235..509314,509382..509506,509584..509777,509896..510048,510137..510403,510514..510675,510778..510928,511030..511171,511264..511405,511494..511584,511706..511901,512015..512120,512252..512413,512498..512600,512674..512940,513044..513234)	Acanthamoeba castellanii str. Neff	14920920
ACA1_114570	CDS	ACA1_114570	NW_004457554.1	513395	514721	R	encoded by transcript ACA1_114570A; uncharacterized protein	complement(join(513395..513524,513609..513759,513895..514095,514167..514334,514439..514721))	Acanthamoeba castellanii str. Neff	14920921
ACA1_114580	CDS	ACA1_114580	NW_004457554.1	515102	516742	R	encoded by transcript ACA1_114580A; hyaluronan / mrna binding family protein	complement(join(515102..516183,516406..516742))	Acanthamoeba castellanii str. Neff	14920922
ACA1_114590	CDS	ACA1_114590	NW_004457554.1	517514	519449	R	encoded by transcript ACA1_114590A; proteasome activator protein	complement(join(517514..517525,517610..517662,517782..517824,517947..518027,518182..518294,518411..518436,518589..518609,518713..518789,518947..519096,519336..519449))	Acanthamoeba castellanii str. Neff	14920923
ACA1_114600	CDS	ACA1_114600	NW_004457554.1	519294	520499	D	encoded by transcript ACA1_114600A; uncharacterized protein	join(519294..519428,519671..519829,519921..519964,520123..520203,520322..520499)	Acanthamoeba castellanii str. Neff	14920925
ACA1_114620	CDS	ACA1_114620	NW_004457554.1	527460	528110	D	encoded by transcript ACA1_114620A; uncharacterized protein	join(527460..527485,527768..528110)	Acanthamoeba castellanii str. Neff	14920926
ACA1_114630	CDS	ACA1_114630	NW_004457554.1	528328	530468	D	encoded by transcript ACA1_114630A; Serine/threonineprotein kinase	join(528328..528389,528520..528706,528913..529111,529269..529395,529467..529587,529698..529835,529969..530134,530230..530301,530440..530468)	Acanthamoeba castellanii str. Neff	14920927
ACA1_114640	CDS	ACA1_114640	NW_004457554.1	530845	531177	D	encoded by transcript ACA1_114640A; ACN9 family protein	join(530845..530880,530965..531177)	Acanthamoeba castellanii str. Neff	14920928
ACA1_114650	CDS	ACA1_114650	NW_004457554.1	531291	531714	R	encoded by transcript ACA1_114650A; uncharacterized protein	complement(join(531291..531392,531466..531548,531645..531714))	Acanthamoeba castellanii str. Neff	14920929
ACA1_114660	CDS	ACA1_114660	NW_004457554.1	531983	537880	R	encoded by transcript ACA1_114660A; DNAdirected RNA polymerase, beta subunit	complement(join(531983..532135,532270..532414,532574..532697,532862..532949,533060..533182,533297..533511,533596..533782,533850..533970,534292..534403,534575..534955,535277..535424,535549..535650,535854..536079,536174..536352,536523..536627,536724..536808,536936..537053,537153..537418,537567..537721,537806..537880))	Acanthamoeba castellanii str. Neff	14920930
ACA1_114770	CDS	ACA1_114770	NW_004457554.1	538052	540095	D	encoded by transcript ACA1_114770A; protein kinase	join(538052..538683,538774..539732,539815..540095)	Acanthamoeba castellanii str. Neff	14920931
ACA1_114780	CDS	ACA1_114780	NW_004457554.1	540265	542354	R	encoded by transcript ACA1_114780A; cell cycle control protein	complement(join(540265..541644,541655..542221,542322..542354))	Acanthamoeba castellanii str. Neff	14920932
ACA1_114790	CDS	ACA1_114790	NW_004457554.1	542531	545052	D	encoded by transcript ACA1_114790A; DEAD/DEAH box helicase domain containing protein	join(542531..542839,542948..543066,543166..543838,543887..544519,544612..544819,544946..545052)	Acanthamoeba castellanii str. Neff	14920933
ACA1_114800	CDS	ACA1_114800	NW_004457554.1	545155	547020	D	encoded by transcript ACA1_114800A; glucokinase regulator, putative	join(545155..545379,545581..545663,545761..545843,546019..546083,546200..546264,546348..546427,546551..546688,546797..547020)	Acanthamoeba castellanii str. Neff	14920934
ACA1_114810	CDS	ACA1_114810	NW_004457554.1	547154	548707	D	encoded by transcript ACA1_114810A; glucokinase regulator, putative	join(547154..547298,547376..547447,547587..547813,547911..548094,548187..548260,548366..548506,548615..548707)	Acanthamoeba castellanii str. Neff	14920935
ACA1_114820	CDS	ACA1_114820	NW_004457554.1	548964	553399	D	encoded by transcript ACA1_114820A; glucosylceramidase	join(548964..549163,549294..549520,549637..549685,549786..549912,549998..550184,550332..550501,550589..550714,550800..551005,551285..551417,551511..551611,551715..551781,551870..552153,552227..552286,552393..552537,552607..552762,552886..552966,553064..553198,553271..553399)	Acanthamoeba castellanii str. Neff	14920936
ACA1_114830	CDS	ACA1_114830	NW_004457554.1	553508	553933	D	encoded by transcript ACA1_114830A; uncharacterized protein	553508..553933	Acanthamoeba castellanii str. Neff	14920937
ACA1_114840	CDS	ACA1_114840	NW_004457554.1	555183	559853	D	encoded by transcript ACA1_114840A; Ser/Thr phosphatase	join(555183..555296,555426..555719,555819..556590,556716..556766,556853..557024,557165..557247,557361..557459,557609..557714,557808..557938,558022..558197,558493..558594,558744..558884,558990..559119,559252..559330,559429..559497,559604..559674,559768..559853)	Acanthamoeba castellanii str. Neff	14920938
ACA1_114850	CDS	ACA1_114850	NW_004457554.1	561061	566840	D	encoded by transcript ACA1_114850A; SAM domain (Sterile alpha motif) domain containing protein	join(561061..561071,561090..561474,561577..561771,562123..562395,562500..562711,562809..562890,563011..563088,563185..563864,563932..564126,564207..564595,564736..564839,564975..565066,565242..565357,565468..566840)	Acanthamoeba castellanii str. Neff	14920939
ACA1_114860	CDS	ACA1_114860	NW_004457554.1	567007	569027	R	encoded by transcript ACA1_114860A; Ankyrin repeat containing protein	complement(join(567007..567689,567814..567975,568123..568266,568357..568485,568550..568623,568747..569027))	Acanthamoeba castellanii str. Neff	14920940
ACA1_114870	CDS	ACA1_114870	NW_004457554.1	569314	572909	D	encoded by transcript ACA1_114870A; transcription initiation factor tfiid component taf4 family protein	join(569314..569532,569605..569913,570048..570114,570208..570383,570473..570532,570657..570774,570885..570996,571131..571229,571356..571675,571792..571922,572013..572228,572315..572632,572718..572909)	Acanthamoeba castellanii str. Neff	14920941
ACA1_114880	CDS	ACA1_114880	NW_004457554.1	573397	573825	D	encoded by transcript ACA1_114880A; LIM domain containing protein	573397..573825	Acanthamoeba castellanii str. Neff	14920942
ACA1_114890	CDS	ACA1_114890	NW_004457554.1	574478	575336	D	encoded by transcript ACA1_114890A; uncharacterized protein	join(574478..574688,574786..575336)	Acanthamoeba castellanii str. Neff	14920943
ACA1_114900	CDS	ACA1_114900	NW_004457554.1	575469	581329	R	encoded by transcript ACA1_114900A; leucine rich repeat domain containing protein	complement(join(575469..575738,576094..576152,576254..576366,576478..576604,576762..576860,576960..577032,577193..577238,577359..577510,577608..577759,577839..578092,578166..578382,578544..578712,578889..579067,579158..579382,579473..579577,579677..579749,579853..579927,580012..580082,580200..580430,580542..580711,580819..580847,580941..581123,581252..581329))	Acanthamoeba castellanii str. Neff	14920944
ACA1_114910	CDS	ACA1_114910	NW_004457554.1	581867	585824	R	encoded by transcript ACA1_114910A; C2 domain containing protein	complement(join(581867..582367,582389..582408,582520..582788,582803..582912,583012..583124,583221..584155,584275..584350,584420..584477,584579..584767,584909..585075,585185..585314,585439..585661,585814..585824))	Acanthamoeba castellanii str. Neff	14920945
ACA1_114920	CDS	ACA1_114920	NW_004457554.1	586508	587783	D	encoded by transcript ACA1_114920A; ubiquitin interaction motif domain containing protein	join(586508..586689,586786..586926,587017..587100,587181..587222,587331..587667,587760..587783)	Acanthamoeba castellanii str. Neff	14920946
ACA1_114930	CDS	ACA1_114930	NW_004457554.1	588090	593206	D	encoded by transcript ACA1_114930A; adenylate and guanylate cyclase catalytic domain containing protein	join(588090..588245,588538..588627,588704..589143,589238..589338,589430..589572,589661..589756,590044..590070,590087..590326,590453..590596,590680..590883,590979..591233,591565..591686,591806..591908,592036..592197,592366..592494,592604..592795,592931..593206)	Acanthamoeba castellanii str. Neff	14920947
ACA1_115040	CDS	ACA1_115040	NW_004457554.1	593302	595114	R	encoded by transcript ACA1_115040A; uncharacterized protein	complement(join(593302..593832,593946..594062,594172..594335,594424..594526,594625..594850,594932..594989,595084..595114))	Acanthamoeba castellanii str. Neff	14920948
ACA1_115050	CDS	ACA1_115050	NW_004457554.1	596007	596976	D	encoded by transcript ACA1_115050A; LIM domain containing protein	join(596007..596217,596360..596571,596674..596976)	Acanthamoeba castellanii str. Neff	14920949
ACA1_115160	CDS	ACA1_115160	NW_004457554.1	597585	598162	R	encoded by transcript ACA1_115160A; HMG (high mobility group) box domain containing protein	complement(join(597585..597797,597944..598162))	Acanthamoeba castellanii str. Neff	14920950
ACA1_115170	CDS	ACA1_115170	NW_004457554.1	598524	601055	D	encoded by transcript ACA1_115170A; uncharacterized protein	join(598524..598781,598860..599298,599389..599502,599669..599800,599899..600003,600164..600373,600506..600621,600705..601055)	Acanthamoeba castellanii str. Neff	14920951
ACA1_115180	CDS	ACA1_115180	NW_004457554.1	601191	601745	R	encoded by transcript ACA1_115180A; cwf18 pre-mRNA splicing factor protein	complement(601191..601745)	Acanthamoeba castellanii str. Neff	14920952
ACA1_115190	CDS	ACA1_115190	NW_004457554.1	602054	602417	D	encoded by transcript ACA1_115190A; uncharacterized protein	join(602054..602190,602273..602288,602370..602417)	Acanthamoeba castellanii str. Neff	14920953
ACA1_115200	CDS	ACA1_115200	NW_004457554.1	602622	603886	D	encoded by transcript ACA1_115200A; uncharacterized protein	join(602622..602678,602772..602992,603105..603303,603470..603886)	Acanthamoeba castellanii str. Neff	14920954
ACA1_115210	CDS	ACA1_115210	NW_004457554.1	603939	604977	R	encoded by transcript ACA1_115210A; uncharacterized protein	complement(join(603939..604206,604273..604442,604526..604625,604691..604977))	Acanthamoeba castellanii str. Neff	14920955
ACA1_115220	CDS	ACA1_115220	NW_004457554.1	605337	606473	R	encoded by transcript ACA1_115220A; uncharacterized protein	complement(join(605337..605593,605696..605867,605930..606030,606140..606473))	Acanthamoeba castellanii str. Neff	14920956
ACA1_115230	CDS	ACA1_115230	NW_004457554.1	606852	610197	D	encoded by transcript ACA1_115230A; uncharacterized protein	join(606852..606973,607070..607258,607451..607601,607754..607934,608056..608193,608314..608411,608494..608655,608757..608897,609004..609062,609155..609331,609457..609578,609690..609787,609889..610197)	Acanthamoeba castellanii str. Neff	14920957
ACA1_115240	CDS	ACA1_115240	NW_004457554.1	610338	610789	D	encoded by transcript ACA1_115240A; uncharacterized protein	join(610338..610529,610645..>610789)	Acanthamoeba castellanii str. Neff	14920958
ACA1_115350	CDS	ACA1_115350	NW_004457554.1	611493	612286	D	encoded by transcript ACA1_115350A; uncharacterized protein	join(611493..611684,611795..611939,612015..612286)	Acanthamoeba castellanii str. Neff	14920959
ACA1_115360	CDS	ACA1_115360	NW_004457554.1	613351	616075	R	encoded by transcript ACA1_115360A; CUE domain containing protein	complement(join(613351..613510,613598..613999,614077..614392,614477..614738,614810..614890,614958..615206,615285..615420,615486..616075))	Acanthamoeba castellanii str. Neff	14920960
ACA1_115370	CDS	ACA1_115370	NW_004457554.1	616917	617567	D	encoded by transcript ACA1_115370A; uncharacterized protein	join(616917..616951,617019..617060,617121..617255,617471..617567)	Acanthamoeba castellanii str. Neff	14920961
ACA1_115380	CDS	ACA1_115380	NW_004457554.1	618198	620844	D	encoded by transcript ACA1_115380A; translation initiation factor IF2, putative	join(618198..618368,618468..618747,618837..618899,618983..619152,619319..619519,619603..619776,619900..620119,620234..620844)	Acanthamoeba castellanii str. Neff	14920962
ACA1_115390	CDS	ACA1_115390	NW_004457554.1	620967	622716	R	encoded by transcript ACA1_115390A; cysteine proteinase	complement(join(620967..621055,621186..621288,621361..621496,621554..621722,621784..621875,621946..622098,622179..622286,622361..622716))	Acanthamoeba castellanii str. Neff	14920963
ACA1_115400	CDS	ACA1_115400	NW_004457554.1	623159	625422	D	encoded by transcript ACA1_115400A; protoporphyrinogen oxidase	join(623159..623364,623441..623545,623632..623762,623898..623975,624095..624459,624589..624768,624843..624959,625078..625422)	Acanthamoeba castellanii str. Neff	14920964
ACA1_115410	CDS	ACA1_115410	NW_004457554.1	625613	629417	R	encoded by transcript ACA1_115410A; LMBR1 domain containing protein	complement(join(625613..625672,625804..625890,626175..626278,626428..626551,626652..626729,626842..626920,627043..627176,627319..627536,627656..627720,627797..627993,628144..628197,628303..628377,628395..628401,628578..628682,628779..628940,629042..629166,629247..629417))	Acanthamoeba castellanii str. Neff	14920965
ACA1_115420	CDS	ACA1_115420	NW_004457554.1	629707	630981	R	encoded by transcript ACA1_115420A; SMI1 / KNR4 family protein	complement(join(629707..630041,630148..630252,630350..630587,630784..630981))	Acanthamoeba castellanii str. Neff	14920966
ACA1_115430	CDS	ACA1_115430	NW_004457554.1	631201	634975	D	encoded by transcript ACA1_115430A; DEAD/DEAH box helicase domain containing protein	join(631201..631338,631474..631599,631704..631976,632102..632152,632304..632497,632580..632678,632801..633068,633146..633287,633396..633532,633665..633763,633871..633949,634043..634143,634215..634451,634631..634975)	Acanthamoeba castellanii str. Neff	14920967
ACA1_115540	CDS	ACA1_115540	NW_004457554.1	635550	636432	D	encoded by transcript ACA1_115540A; uncharacterized protein	join(635550..635595,635665..635795,636013..636432)	Acanthamoeba castellanii str. Neff	14920968
ACA1_115650	CDS	ACA1_115650	NW_004457554.1	637061	637809	D	encoded by transcript ACA1_115650A; uncharacterized protein	join(637061..637106,637176..637320,637430..637681,637761..637809)	Acanthamoeba castellanii str. Neff	14920969
ACA1_115660	CDS	ACA1_115660	NW_004457554.1	637833	638400	R	encoded by transcript ACA1_115660A; uncharacterized protein	complement(join(637833..638186,638371..638400))	Acanthamoeba castellanii str. Neff	14920970
ACA1_115670	CDS	ACA1_115670	NW_004457554.1	638541	642558	R	encoded by transcript ACA1_115670A; aconitate hydratase, mitochondrial	complement(join(638541..638761,638914..639228,639306..639437,639562..639664,639768..639902,640001..640266,640367..640432,640535..640655,640752..641059,641175..641337,641471..641537,641620..641681,641781..641879,641978..642067,642179..642336,642459..642558))	Acanthamoeba castellanii str. Neff	14920971
ACA1_115680	CDS	ACA1_115680	NW_004457554.1	643342	645136	R	encoded by transcript ACA1_115680A; PH domain containing protein	complement(join(643342..643402,643483..643613,643741..644004,644103..644153,644187..644303,644544..644623,644690..644795,644899..645000,645080..645136))	Acanthamoeba castellanii str. Neff	14920972
ACA1_115690	CDS	ACA1_115690	NW_004457554.1	646096	650825	D	encoded by transcript ACA1_115690A; DNA mismatch repair protein, C-terminal domain containing protein	join(646096..646122,646155..646227,646311..646397,646473..646609,646732..646850,646954..647073,647156..647305,647433..647511,647657..647812,647883..648409,648558..648857,648931..649292,649400..649789,649854..650025,650134..650303,650397..650507,650575..650825)	Acanthamoeba castellanii str. Neff	14920973
ACA1_115700	CDS	ACA1_115700	NW_004457554.1	650938	652447	R	encoded by transcript ACA1_115700A; beta-1,3-mannanase	complement(join(650938..651452,651551..651827,651932..652182,652297..652447))	Acanthamoeba castellanii str. Neff	14920974
ACA1_115710	CDS	ACA1_115710	NW_004457554.1	652595	654711	R	encoded by transcript ACA1_115710A; R3H domain containing protein	complement(join(652595..652743,652835..652966,653056..653476,653589..653702,653802..654032,654120..654215,654357..654549,654659..654711))	Acanthamoeba castellanii str. Neff	14920975
ACA1_115720	CDS	ACA1_115720	NW_004457554.1	654943	656567	R	encoded by transcript ACA1_115720A; SAM-dependent methyltransferase	complement(join(654943..655080,655141..655269,655394..655495,655580..655692,655816..655955,656058..656430,656534..656567))	Acanthamoeba castellanii str. Neff	14920976
ACA1_115730	CDS	ACA1_115730	NW_004457554.1	657043	658750	D	encoded by transcript ACA1_115730A; uncharacterized protein	join(657043..658119,658206..658358,658586..658750)	Acanthamoeba castellanii str. Neff	14920977
ACA1_115740	CDS	ACA1_115740	NW_004457554.1	658943	660611	D	encoded by transcript ACA1_115740A; UDPglucose 4-epimerase	join(658943..658954,659064..659202,659327..659434,659534..659644,659759..659970,660039..660364,660461..660611)	Acanthamoeba castellanii str. Neff	14920978
ACA1_115750	CDS	ACA1_115750	NW_004457554.1	660702	661715	R	encoded by transcript ACA1_115750A; uncharacterized protein	complement(join(660702..660889,660968..661450,661547..661715))	Acanthamoeba castellanii str. Neff	14920979
ACA1_115760	CDS	ACA1_115760	NW_004457554.1	661756	662409	R	encoded by transcript ACA1_115760A; uncharacterized protein	complement(join(661756..661786,661928..662012,662151..662409))	Acanthamoeba castellanii str. Neff	14920980
ACA1_115770	CDS	ACA1_115770	NW_004457554.1	662517	665178	R	encoded by transcript ACA1_115770A; tRNA modification GTPase TrmE, putative	complement(join(662517..662688,662793..662861,662955..663058,663128..663272,663380..663486,663591..663691,663774..663875,663981..664025,664103..664178,664243..664362,664458..664579,664764..665178))	Acanthamoeba castellanii str. Neff	14920981
ACA1_115780	CDS	ACA1_115780	NW_004457554.1	668874	670396	R	encoded by transcript ACA1_115780A; uncharacterized protein	complement(join(668874..669068,669417..669647,669804..669973,670222..670396))	Acanthamoeba castellanii str. Neff	14920982
ACA1_115790	CDS	ACA1_115790	NW_004457554.1	670776	673126	R	encoded by transcript ACA1_115790A; uncharacterized protein	complement(join(670776..670795,670818..670934,670993..671701,671766..671900,671984..673126))	Acanthamoeba castellanii str. Neff	14920983
ACA1_115800	CDS	ACA1_115800	NW_004457554.1	673404	674352	R	encoded by transcript ACA1_115800A; uncharacterized protein	complement(join(673404..673430,673502..673578,673652..673838,673899..674223,674282..674352))	Acanthamoeba castellanii str. Neff	14920984
ACA1_115820	CDS	ACA1_115820	NW_004457554.1	682553	683863	R	encoded by transcript ACA1_115820A; methyltransferase domain containing protein	complement(join(682553..682795,682910..683058,683165..683296,683492..683737,683803..683863))	Acanthamoeba castellanii str. Neff	14920986
ACA1_115830	CDS	ACA1_115830	NW_004457554.1	684230	686316	D	encoded by transcript ACA1_115830A; uncharacterized protein	join(684230..684383,684460..684533,684628..684729,684831..684979,685101..685197,685312..685431,685550..685783,685880..685962,686045..686129,686218..686268,686311..686316)	Acanthamoeba castellanii str. Neff	14920987
ACA1_115840	CDS	ACA1_115840	NW_004457554.1	686637	687352	R	encoded by transcript ACA1_115840A; Coiledcoil domain containing protein	complement(join(686637..686702,686789..686993,687160..687236,687254..687352))	Acanthamoeba castellanii str. Neff	14920988
ACA1_115850	CDS	ACA1_115850	NW_004457554.1	687701	688256	R	encoded by transcript ACA1_115850A; protein phosphatase inhibitor protein	complement(join(687701..687823,687897..687997,688088..688256))	Acanthamoeba castellanii str. Neff	14920989
ACA1_115860	CDS	ACA1_115860	NW_004457554.1	688407	691849	R	encoded by transcript ACA1_115860A; NOT2 / NOT3 / NOT5 family protein	complement(join(688407..688502,688589..688700,688805..688960,689049..689277,689368..689500,689599..689753,689818..689868,689968..690303,690414..690605,690704..690804,690915..691051,691151..691216,691298..691508,691628..691746,691838..691849))	Acanthamoeba castellanii str. Neff	14920990
ACA1_115870	CDS	ACA1_115870	NW_004457554.1	692469	693875	R	encoded by transcript ACA1_115870A; uncharacterized protein	complement(join(692469..692719,692797..693157,693231..693337,693443..693875))	Acanthamoeba castellanii str. Neff	14920991
ACA1_115880	CDS	ACA1_115880	NW_004457554.1	694764	698508	D	encoded by transcript ACA1_115880A; NADbinding domain 4 domain containing protein	join(694764..695294,695512..695691,695780..696030,696138..696324,696409..697494,697563..697887,697958..698508)	Acanthamoeba castellanii str. Neff	14920992
ACA1_115890	CDS	ACA1_115890	NW_004457554.1	698886	702073	R	encoded by transcript ACA1_115890A; MethylCpG binding domain containing protein	complement(join(698886..698898,699009..699025,699168..699785,699889..699978,700120..700228,700341..700446,700559..700700,700919..701110,701202..701294,701378..702073))	Acanthamoeba castellanii str. Neff	14920993
ACA1_116000	CDS	ACA1_116000	NW_004457554.1	704194	704745	R	encoded by transcript ACA1_116000A; uncharacterized protein	complement(<704194..704745)	Acanthamoeba castellanii str. Neff	14920994
ACA1_116010	CDS	ACA1_116010	NW_004457554.1	705635	706139	D	encoded by transcript ACA1_116010A; uncharacterized protein	join(705635..705967,705996..706139)	Acanthamoeba castellanii str. Neff	14920995
ACA1_116020	CDS	ACA1_116020	NW_004457554.1	706409	708571	D	encoded by transcript ACA1_116020A; GTPaseactivating protein gacA	join(706409..706526,706636..706658,706737..706837,706934..707018,707121..707208,707282..707386,707483..707680,707782..707885,708193..708277,708366..708571)	Acanthamoeba castellanii str. Neff	14920996
ACA1_116130	CDS	ACA1_116130	NW_004457554.1	708755	709960	D	encoded by transcript ACA1_116130A; Dipeptidylpeptidase	join(708755..708868,709012..709138,709202..709254,709446..709541,709628..709732,709832..709960)	Acanthamoeba castellanii str. Neff	14920997
ACA1_116140	CDS	ACA1_116140	NW_004457554.1	710062	712378	D	encoded by transcript ACA1_116140A; dipeptidyl-peptidase family protein	join(710062..710249,710365..710497,710592..710748,710854..711026,711134..711352,711421..711562,711673..711921,712029..712144,712259..712378)	Acanthamoeba castellanii str. Neff	14920998
ACA1_116150	CDS	ACA1_116150	NW_004457554.1	712410	712873	R	encoded by transcript ACA1_116150A; uncharacterized protein	complement(join(712410..712604,712688..712873))	Acanthamoeba castellanii str. Neff	14920999
ACA1_116160	CDS	ACA1_116160	NW_004457554.1	713145	714581	D	encoded by transcript ACA1_116160A; uncharacterized protein	<713145..714581	Acanthamoeba castellanii str. Neff	14921000
ACA1_116170	CDS	ACA1_116170	NW_004457554.1	715152	718621	R	encoded by transcript ACA1_116170A; uncharacterized protein	complement(join(715152..715331,715413..716234,716374..716477,716583..716717,716800..716886,716973..717143,717208..717420,717571..717678,718086..718193,718306..718473,718570..718621))	Acanthamoeba castellanii str. Neff	14921001
ACA1_116180	CDS	ACA1_116180	NW_004457554.1	718807	720117	D	encoded by transcript ACA1_116180A; Coiledcoil domain containing protein	join(718807..718831,718916..718997,719094..719221,719310..719498,719596..719791,720003..720117)	Acanthamoeba castellanii str. Neff	14921002
ACA1_116190	CDS	ACA1_116190	NW_004457554.1	719952	723768	R	encoded by transcript ACA1_116190A; leucine rich repeat domain containing protein	complement(join(719952..720156,720241..720386,720450..720764,720808..720993,721086..721198,721299..721428,721581..721670,721744..721816,721928..722057,722173..722289,722366..722919,722979..723397,723544..723768))	Acanthamoeba castellanii str. Neff	14921003
ACA1_116200	CDS	ACA1_116200	NW_004457554.1	723921	725945	D	encoded by transcript ACA1_116200A; uncharacterized protein	join(723921..724028,724111..724244,724320..724539,724645..724842,724920..725438,725520..725945)	Acanthamoeba castellanii str. Neff	14921004
ACA1_116210	CDS	ACA1_116210	NW_004457554.1	726036	727931	D	encoded by transcript ACA1_116210A; transporter, major facilitator subfamily protein	join(726036..726526,726610..727100,727187..727308,727393..727579,727660..727931)	Acanthamoeba castellanii str. Neff	14921005
ACA1_116220	CDS	ACA1_116220	NW_004457554.1	728244	729083	D	encoded by transcript ACA1_116220A; steroid isomerase	728244..729083	Acanthamoeba castellanii str. Neff	14921006
ACA1_116230	CDS	ACA1_116230	NW_004457554.1	729589	733129	D	encoded by transcript ACA1_116230A; protein kinase domain containing protein	join(729589..730170,730243..730421,730514..730680,730784..730919,731024..731190,731269..731451,731543..731608,731677..731797,731868..731957,732045..732121,732225..732419,732499..732762,732834..733129)	Acanthamoeba castellanii str. Neff	14921007
ACA1_116240	CDS	ACA1_116240	NW_004457554.1	733537	735223	D	encoded by transcript ACA1_116240A; glutathione Stransferase, C-terminal domain containing protein	join(733537..733772,733860..734528,734605..735223)	Acanthamoeba castellanii str. Neff	14921008
ACA1_116250	CDS	ACA1_116250	NW_004457554.1	735279	738699	R	encoded by transcript ACA1_116250A; DIL domain containing protein	complement(join(735279..735402,735498..735592,735706..735757,735888..735995,736086..736159,736177..736237,736341..736402,736487..736956,737043..737640,737720..737822,737943..737995,738062..738202,738296..738409,738556..738699))	Acanthamoeba castellanii str. Neff	14921009
ACA1_116260	CDS	ACA1_116260	NW_004457554.1	738890	742858	R	encoded by transcript ACA1_116260A; Leucine Rich Repeat and BTB/POZ domain containing protein	complement(join(738890..739232,739346..739608,739783..739965,740035..740220,740297..740401,740508..740643,740693..740781,740890..741235,741333..741428,741523..741671,741777..741843,741905..741969,742200..742268,742325..742413,742506..742620,742784..742858))	Acanthamoeba castellanii str. Neff	14921010
ACA1_116270	CDS	ACA1_116270	NW_004457554.1	743135	744741	D	encoded by transcript ACA1_116270A; uncharacterized protein	join(743135..743317,743443..743506,743572..743693,743794..743933,744009..744118,744230..744387,744498..744545,744628..744741)	Acanthamoeba castellanii str. Neff	14921011
ACA1_116280	CDS	ACA1_116280	NW_004457554.1	745025	747112	R	encoded by transcript ACA1_116280A; formin domain containing protein	complement(join(745025..745138,745226..745324,745391..745542,745610..745739,745827..745910,746011..746166,746252..746326,746506..746739,746821..746928,747026..747112))	Acanthamoeba castellanii str. Neff	14921012
ACA1_116390	CDS	ACA1_116390	NW_004457554.1	747315	749409	R	encoded by transcript ACA1_116390A; uncharacterized protein	complement(join(<747315..748658,748733..748933,749033..749091,749233..749256,749301..749409))	Acanthamoeba castellanii str. Neff	14921013
ACA1_116400	CDS	ACA1_116400	NW_004457554.1	749729	750564	D	encoded by transcript ACA1_116400A; uncharacterized protein	join(749729..749848,750044..750144,750236..750362,750436..750564)	Acanthamoeba castellanii str. Neff	14921014
ACA1_116410	CDS	ACA1_116410	NW_004457554.1	750931	752337	D	encoded by transcript ACA1_116410A; uncharacterized protein	join(750931..750960,751257..751309,751323..752337)	Acanthamoeba castellanii str. Neff	14921015
ACA1_116420	CDS	ACA1_116420	NW_004457554.1	752536	753660	D	encoded by transcript ACA1_116420A; phosphoglycerate mutase family domain containing protein	join(752536..752629,752697..752800,752967..753026,753185..753414,753522..753660)	Acanthamoeba castellanii str. Neff	14921016
ACA1_116430	CDS	ACA1_116430	NW_004457554.1	755467	756538	D	encoded by transcript ACA1_116430A; thymidine kinase	join(755467..755688,755775..755837,755907..755996,756077..756165,756244..756538)	Acanthamoeba castellanii str. Neff	14921017
ACA1_116440	CDS	ACA1_116440	NW_004457554.1	757461	758145	R	encoded by transcript ACA1_116440A; uncharacterized protein	complement(join(757461..757648,757722..758145))	Acanthamoeba castellanii str. Neff	14921018
ACA1_116450	CDS	ACA1_116450	NW_004457554.1	758314	759124	R	encoded by transcript ACA1_116450A; uncharacterized protein	complement(join(758314..758583,758681..758758,758840..759124))	Acanthamoeba castellanii str. Neff	14921019
ACA1_116460	CDS	ACA1_116460	NW_004457554.1	759252	759790	R	encoded by transcript ACA1_116460A; uncharacterized protein	complement(join(759252..759356,759459..759601,759667..759790))	Acanthamoeba castellanii str. Neff	14921020
ACA1_116470	CDS	ACA1_116470	NW_004457554.1	759971	761785	D	encoded by transcript ACA1_116470A; PRP38 premRNA processing factor	join(759971..760133,760197..760380,760451..760509,760657..760774,760854..760979,761063..761283,761303..761543,761641..761785)	Acanthamoeba castellanii str. Neff	14921021
ACA1_116480	CDS	ACA1_116480	NW_004457554.1	761921	763399	D	encoded by transcript ACA1_116480A; phytanoylCoA dioxygenase	join(761921..761999,762068..762159,762232..762336,762399..762438,762716..762854,762931..763024,763091..763255,763333..763365,763379..763399)	Acanthamoeba castellanii str. Neff	14921022
ACA1_116490	CDS	ACA1_116490	NW_004457554.1	763595	764667	D	encoded by transcript ACA1_116490A; uncharacterized protein	join(763595..763645,763765..763848,763946..763980,764057..764185,764267..764409,764558..764667)	Acanthamoeba castellanii str. Neff	14921023
ACA1_116500	CDS	ACA1_116500	NW_004457554.1	764816	768266	R	encoded by transcript ACA1_116500A; NAD(+)/NADH kinase	complement(join(764816..764919,764988..765099,765213..765484,765545..765761,765872..766022,766135..766229,766327..767697,767790..768266))	Acanthamoeba castellanii str. Neff	14921024
ACA1_116510	CDS	ACA1_116510	NW_004457554.1	768470	770935	D	encoded by transcript ACA1_116510A; Fbox domain containing protein	join(768470..768859,768959..769352,769433..769521,769615..769650,769728..769842,769926..770047,770122..770264,770343..770674,770787..770935)	Acanthamoeba castellanii str. Neff	14921025
ACA1_116520	CDS	ACA1_116520	NW_004457554.1	771156	771656	R	encoded by transcript ACA1_116520A; NCS1 family transporter	complement(join(771156..771569,771636..771656))	Acanthamoeba castellanii str. Neff	14921026
ACA1_116530	CDS	ACA1_116530	NW_004457554.1	772688	773972	D	encoded by transcript ACA1_116530A; uncharacterized protein	join(772688..772867,772999..773155,773249..773431,773603..773706,773820..773972)	Acanthamoeba castellanii str. Neff	14921027
ACA1_116540	CDS	ACA1_116540	NW_004457554.1	774109	775073	R	encoded by transcript ACA1_116540A; uncharacterized protein	complement(join(774109..774906,775032..775073))	Acanthamoeba castellanii str. Neff	14921028
ACA1_116550	CDS	ACA1_116550	NW_004457554.1	775257	779730	R	encoded by transcript ACA1_116550A; hydrolase, alpha/beta fold family	complement(join(775257..775340,775458..775588,775698..775821,775999..776085,776185..776292,776361..776518,776614..776677,776798..776927,777213..777353,777463..777628,777698..777887,777959..778030,778100..778218,778292..778375,778453..778567,778640..778712,778780..778886,778973..779049,779113..779278,779364..779438,779557..779643,779677..779730))	Acanthamoeba castellanii str. Neff	14921029
ACA1_116560	CDS	ACA1_116560	NW_004457554.1	779833	784082	R	encoded by transcript ACA1_116560A; uncharacterized protein	complement(join(779833..780372,780457..780806,780892..781018,781095..781207,781309..781449,781521..781587,781665..781738,781822..782725,782935..783080,783167..783262,783332..783979,784007..784082))	Acanthamoeba castellanii str. Neff	14921030
ACA1_116580	CDS	ACA1_116580	NW_004457554.1	790099	792491	R	encoded by transcript ACA1_116580A; carboxypeptidase Ylike protein	complement(join(790099..790178,790264..790350,790445..790628,790797..790951,791030..791147,791269..791450,791552..791665,791764..791878,792003..792118,792212..792272,792399..792491))	Acanthamoeba castellanii str. Neff	14921032
ACA1_116590	CDS	ACA1_116590	NW_004457554.1	792658	794905	R	encoded by transcript ACA1_116590A; uncharacterized protein	complement(join(792658..792985,793092..793936,794216..794320,794417..794480,794559..794905))	Acanthamoeba castellanii str. Neff	14921033
ACA1_116600	CDS	ACA1_116600	NW_004457554.1	795405	796193	D	encoded by transcript ACA1_116600A; Dtyrosyl-tRNA(Tyr) deacylase	join(795405..795538,795622..795716,795784..795816,795936..796043,796111..796193)	Acanthamoeba castellanii str. Neff	14921034
ACA1_116610	CDS	ACA1_116610	NW_004457554.1	796385	809644	R	encoded by transcript ACA1_116610A; HECTdomain (ubiquitin-transferase) domain containing protein	complement(join(796385..796484,796575..796785,796882..798446,798519..798649,798721..800333,800349..803197,803270..806132,806218..807151,807220..807341,807417..808725,808833..809148,809216..809325,809408..809494,809582..809644))	Acanthamoeba castellanii str. Neff	14921035
ACA1_116620	CDS	ACA1_116620	NW_004457554.1	810255	814157	D	encoded by transcript ACA1_116620A; protein kinase domain containing protein	join(810255..810430,810570..810659,810766..810984,811090..811114,811235..811394,811461..811546,811566..811757,811823..811930,811998..812136,812217..812355,812416..812620,812694..814157)	Acanthamoeba castellanii str. Neff	14921036
ACA1_116630	CDS	ACA1_116630	NW_004457554.1	814424	816509	D	encoded by transcript ACA1_116630A; lipoyltransferase and lipoateprotein ligase	join(814424..814537,814649..814768,814869..814979,815059..815117,815239..815365,815494..815580,815660..815788,815896..815983,816059..816114,816205..816307,816385..816509)	Acanthamoeba castellanii str. Neff	14921037
ACA1_116640	CDS	ACA1_116640	NW_004457554.1	816583	817394	R	encoded by transcript ACA1_116640A; Lipase	complement(join(816583..816976,816991..817394))	Acanthamoeba castellanii str. Neff	14921038
ACA1_116650	CDS	ACA1_116650	NW_004457554.1	817939	818486	D	encoded by transcript ACA1_116650A; transcription factor pcc1 protein	join(817939..818063,818139..818267,818366..818486)	Acanthamoeba castellanii str. Neff	14921039
ACA1_116660	CDS	ACA1_116660	NW_004457554.1	818586	825007	R	encoded by transcript ACA1_116660A; zinc finger domain containing protein	complement(join(818586..819455,819544..819648,819735..819797,819876..820060,820120..820238,820317..820384,820479..820772,821048..821153,821231..821322,821606..821675,821812..821875,821982..822079,822170..822288,822367..822617,822722..822791,822880..822929,823014..823148,823220..823444,823542..823617,823690..823809,823916..824056,824156..824277,824353..824719,824771..825007))	Acanthamoeba castellanii str. Neff	14921040
ACA1_116670	CDS	ACA1_116670	NW_004457554.1	825210	826316	R	encoded by transcript ACA1_116670A; uncharacterized protein	complement(join(825210..825588,825749..825946,825966..826010,826081..826316))	Acanthamoeba castellanii str. Neff	14921041
ACA1_116680	CDS	ACA1_116680	NW_004457554.1	826817	827688	R	encoded by transcript ACA1_116680A; uncharacterized protein	complement(join(826817..826865,826925..826974,827050..827230,827341..827395,827477..827583,827642..>827688))	Acanthamoeba castellanii str. Neff	14921042
ACA1_116690	CDS	ACA1_116690	NW_004457554.1	827968	829472	D	encoded by transcript ACA1_116690A; uncharacterized protein	join(827968..828096,828212..828287,828416..828582,828668..828827,828919..829173,829261..829472)	Acanthamoeba castellanii str. Neff	14921043
ACA1_116700	CDS	ACA1_116700	NW_004457554.1	829571	830364	R	encoded by transcript ACA1_116700A; uncharacterized protein	complement(join(829571..829619,829698..829873,829996..830051,830131..830229,830319..830364))	Acanthamoeba castellanii str. Neff	14921044
ACA1_116710	CDS	ACA1_116710	NW_004457554.1	830740	832863	R	encoded by transcript ACA1_116710A; uncharacterized protein	complement(join(830740..830863,831009..831171,831282..831416,831536..831584,831882..831962,832178..832333,832451..832577,832703..832863))	Acanthamoeba castellanii str. Neff	14921045
ACA1_116720	CDS	ACA1_116720	NW_004457554.1	833204	834832	D	encoded by transcript ACA1_116720A; DnaJ domain containing protein	join(833204..833341,833414..833488,833552..833657,833740..833850,833942..834015,834097..834209,834296..834467,834554..834832)	Acanthamoeba castellanii str. Neff	14921046
ACA1_116730	CDS	ACA1_116730	NW_004457554.1	835369	838222	D	encoded by transcript ACA1_116730A; uncharacterized protein	join(835369..836500,836623..836705,836803..837150,837236..837421,837511..837568,837645..837774,837855..837932,838018..838222)	Acanthamoeba castellanii str. Neff	14921047
ACA1_116740	CDS	ACA1_116740	NW_004457554.1	838497	840487	D	encoded by transcript ACA1_116740A; Omethyltransferase	join(838497..838674,838758..838858,838947..839044,839134..839211,839289..839406,839490..839568,839638..839696,839777..839936,840023..840166,840255..840487)	Acanthamoeba castellanii str. Neff	14921048
ACA1_116750	CDS	ACA1_116750	NW_004457554.1	840606	841723	D	encoded by transcript ACA1_116750A; uncharacterized protein	join(840606..840644,840735..841040,841140..841294,841427..841529,841619..841723)	Acanthamoeba castellanii str. Neff	14921049
ACA1_116760	CDS	ACA1_116760	NW_004457554.1	842024	843071	D	encoded by transcript ACA1_116760A; uncharacterized protein	join(842024..842288,842428..842665,842762..843071)	Acanthamoeba castellanii str. Neff	14921050
ACA1_116770	CDS	ACA1_116770	NW_004457554.1	843173	844773	R	encoded by transcript ACA1_116770A; mitochondrial metalloendopeptidase, putative	complement(join(843173..843300,843388..843470,843597..843661,843788..843891,843968..844106,844185..844262,844407..844519,844632..844773))	Acanthamoeba castellanii str. Neff	14921051
ACA1_116780	CDS	ACA1_116780	NW_004457554.1	845457	848985	D	encoded by transcript ACA1_116780A; MIF4G domain containing protein	join(845457..845525,845602..846044,846132..846381,846487..846864,846977..848026,848109..848216,848328..848408,848535..848747,848854..848985)	Acanthamoeba castellanii str. Neff	14921052
ACA1_116790	CDS	ACA1_116790	NW_004457554.1	849053	851496	R	encoded by transcript ACA1_116790A; uncharacterized protein	complement(join(849053..849282,849380..849720,849815..850008,850123..850250,850417..850474,850541..850669,850820..850942,851068..851144,851295..851496))	Acanthamoeba castellanii str. Neff	14921053
ACA1_116800	CDS	ACA1_116800	NW_004457554.1	851695	852642	R	encoded by transcript ACA1_116800A; uncharacterized protein	complement(join(851695..851703,851825..852002,852139..852298,852421..852436,852469..852642))	Acanthamoeba castellanii str. Neff	14921054
ACA1_116810	CDS	ACA1_116810	NW_004457554.1	853367	854584	D	encoded by transcript ACA1_116810A; uncharacterized protein	join(853367..853424,853512..853594,853676..853692,853779..853837,853931..854060,854114..854145,854213..854318,854536..854584)	Acanthamoeba castellanii str. Neff	14921055
ACA1_116820	CDS	ACA1_116820	NW_004457554.1	854647	855915	D	encoded by transcript ACA1_116820A; Nse1, component of SMC56 complex, putative	join(854647..854791,854859..855052,855156..855295,855396..855507,855616..855915)	Acanthamoeba castellanii str. Neff	14921056
ACA1_116840	CDS	ACA1_116840	NW_004457554.1	856656	857502	D	encoded by transcript ACA1_116840A; uncharacterized protein	join(856656..856962,857109..857222,857290..857330,857383..857502)	Acanthamoeba castellanii str. Neff	14921058
ACA1_116850	CDS	ACA1_116850	NW_004457554.1	857651	861383	D	encoded by transcript ACA1_116850A; JmjC domain containing protein	join(857651..857749,857847..858278,858390..858576,858652..858688,858731..858793,858878..859026,859103..859490,859592..859712,859817..859879,859977..860166,860270..860341,860415..860680,860714..861119,861214..861383)	Acanthamoeba castellanii str. Neff	14921059
ACA1_116860	CDS	ACA1_116860	NW_004457554.1	861898	863225	D	encoded by transcript ACA1_116860A; uncharacterized protein	join(861898..862139,862232..863225)	Acanthamoeba castellanii str. Neff	14921060
ACA1_116870	CDS	ACA1_116870	NW_004457554.1	863438	865554	R	encoded by transcript ACA1_116870A; Actin	complement(join(863438..863469,863561..863686,863781..863881,863963..864029,864112..864180,864265..864386,864458..864545,864646..864732,864857..864947,865029..865182,865276..865322,865402..865554))	Acanthamoeba castellanii str. Neff	14921061
ACA1_116880	CDS	ACA1_116880	NW_004457554.1	866209	866927	D	encoded by transcript ACA1_116880A; general stress protein 26	join(866209..866443,866506..866580,866713..866927)	Acanthamoeba castellanii str. Neff	14921062
ACA1_116890	CDS	ACA1_116890	NW_004457554.1	866947	867611	R	encoded by transcript ACA1_116890A; DNA-directed RNA polymerase II family protein	complement(join(866947..867087,867130..867217,867301..867360,867445..867611))	Acanthamoeba castellanii str. Neff	14921063
ACA1_116900	CDS	ACA1_116900	NW_004457554.1	867938	869249	D	encoded by transcript ACA1_116900A; UBA/TSN domain containing protein	join(867938..868250,868348..868435,868546..868624,868737..868835,868952..869134,869190..869249)	Acanthamoeba castellanii str. Neff	14921064
ACA1_116910	CDS	ACA1_116910	NW_004457554.1	869608	872764	D	encoded by transcript ACA1_116910A; PKD domain containing protein	join(869608..869668,869775..870107,870211..870263,870428..870499,870625..870692,870772..870858,870961..871074,871153..871265,871363..871423,871564..871624,871718..871823,871907..872263,872365..872613,872724..872764)	Acanthamoeba castellanii str. Neff	14921065
ACA1_116920	CDS	ACA1_116920	NW_004457554.1	873084	874597	R	encoded by transcript ACA1_116920A; uncharacterized protein	complement(join(873084..873203,873260..873458,873570..873673,873764..873842,874008..874597))	Acanthamoeba castellanii str. Neff	14921066
ACA1_116930	CDS	ACA1_116930	NW_004457554.1	875320	876144	D	encoded by transcript ACA1_116930A; pyrroline5-carboxylate reductase	875320..876144	Acanthamoeba castellanii str. Neff	14921067
ACA1_116940	CDS	ACA1_116940	NW_004457554.1	876593	878145	D	encoded by transcript ACA1_116940A; protein phosphatase 2C domain containing protein	join(876593..877073,877205..877318,877405..877488,877588..877795,877875..878145)	Acanthamoeba castellanii str. Neff	14921068
ACA1_116950	CDS	ACA1_116950	NW_004457554.1	880463	882349	D	encoded by transcript ACA1_116950A; uncharacterized protein	880463..882349	Acanthamoeba castellanii str. Neff	14921069
ACA1_116960	CDS	ACA1_116960	NW_004457554.1	882435	883125	D	encoded by transcript ACA1_116960A; uncharacterized protein	join(882435..882551,882644..882717,882795..882847,882998..883125)	Acanthamoeba castellanii str. Neff	14921070
ACA1_116970	CDS	ACA1_116970	NW_004457554.1	883270	884409	D	encoded by transcript ACA1_116970A; uncharacterized protein	join(883270..883545,883698..883789,883869..883947,884040..884099,884203..884409)	Acanthamoeba castellanii str. Neff	14921071
ACA1_116980	CDS	ACA1_116980	NW_004457554.1	884771	885140	D	encoded by transcript ACA1_116980A; uncharacterized protein	join(884771..884872,884938..885010,885088..885140)	Acanthamoeba castellanii str. Neff	14921072
ACA1_116990	CDS	ACA1_116990	NW_004457554.1	885304	887721	D	encoded by transcript ACA1_116990A; carboxypeptidase	join(885304..885438,885526..885639,885732..885859,885974..886068,886157..886289,886365..886478,886532..886756,886862..886931,887011..887170,887245..887326,887444..887537,887602..887721)	Acanthamoeba castellanii str. Neff	14921073
ACA1_117000	CDS	ACA1_117000	NW_004457554.1	888773	890628	D	encoded by transcript ACA1_117000A; homeobox domain containing protein	join(888773..889558,889622..890017,890114..890228,890312..890628)	Acanthamoeba castellanii str. Neff	14921074
ACA1_117010	CDS	ACA1_117010	NW_004457554.1	891199	891915	D	encoded by transcript ACA1_117010A; uncharacterized protein	join(891199..891271,891470..891915)	Acanthamoeba castellanii str. Neff	14921075
ACA1_117020	CDS	ACA1_117020	NW_004457554.1	892085	894369	D	encoded by transcript ACA1_117020A; serine carboxypeptidase	join(892085..892201,892292..892408,892543..892765,892860..892992,893072..893185,893264..893437,893506..893575,893669..893810,893896..893977,894082..894175,894253..894369)	Acanthamoeba castellanii str. Neff	14921076
ACA1_117030	CDS	ACA1_117030	NW_004457554.1	895458	896354	D	encoded by transcript ACA1_117030A; cyclin protein	join(895458..895944,896092..896354)	Acanthamoeba castellanii str. Neff	14921077
ACA1_117040	CDS	ACA1_117040	NW_004457554.1	896851	898880	D	encoded by transcript ACA1_117040A; Rasrelated GTP-binding kinase	join(896851..896942,897049..897130,897250..897312,897495..897617,897780..897882,897985..898088,898202..898301,898387..898460,898573..898726,898810..898880)	Acanthamoeba castellanii str. Neff	14921078
ACA1_117050	CDS	ACA1_117050	NW_004457554.1	899178	900230	R	encoded by transcript ACA1_117050A; uncharacterized protein	complement(join(899178..899970,900061..900230))	Acanthamoeba castellanii str. Neff	14921079
ACA1_117060	CDS	ACA1_117060	NW_004457554.1	900741	904118	D	encoded by transcript ACA1_117060A; uncharacterized protein	join(900741..901130,901250..901353,901434..901500,901588..901675,901800..901968,902098..902229,902371..902423,902640..902777,902896..903039,903156..903341,903438..903515,903598..904118)	Acanthamoeba castellanii str. Neff	14921080
ACA1_117070	CDS	ACA1_117070	NW_004457554.1	904477	907415	R	encoded by transcript ACA1_117070A; Rap/ranGAP	complement(join(904477..904670,904757..904786,904907..905326,905359..905556,905736..905824,905906..905975,906055..906160,906294..906406,906498..906596,906683..906917,906981..907114,907277..907415))	Acanthamoeba castellanii str. Neff	14921081
ACA1_117080	CDS	ACA1_117080	NW_004457554.1	907777	910878	D	encoded by transcript ACA1_117080A; Dcysteine desulfhydrase	join(907777..908378,908453..908515,908659..908762,908860..908980,909208..909353,909428..909556,909676..909747,909822..909978,910066..910163,910249..910415,910490..910613,910706..910878)	Acanthamoeba castellanii str. Neff	14921082
ACA1_117090	CDS	ACA1_117090	NW_004457554.1	911094	914635	R	encoded by transcript ACA1_117090A; RhoGAP domain containing protein	complement(join(911094..911278,911299..911365,911453..911691,911807..911907,911991..912535,912631..912756,912830..912919,912990..913189,913274..913402,913490..913567,913852..913989,914155..914635))	Acanthamoeba castellanii str. Neff	14921083
ACA1_117100	CDS	ACA1_117100	NW_004457554.1	915091	918099	D	encoded by transcript ACA1_117100A; Ankyrin repeat containing protein	join(915091..915259,915463..915575,915655..915668,915725..915849,915929..916058,916148..916176,916265..916399,916496..916748,916854..917178,917554..917769,917852..917939,918014..918099)	Acanthamoeba castellanii str. Neff	14921084
ACA1_117110	CDS	ACA1_117110	NW_004457554.1	918597	920331	R	encoded by transcript ACA1_117110A; transcriptional regulator, Sir2 family protein	complement(join(918597..919022,919104..919216,919293..919425,919579..919818,919905..919968,920082..920188,920281..920331))	Acanthamoeba castellanii str. Neff	14921085
ACA1_117120	CDS	ACA1_117120	NW_004457554.1	920429	920894	R	encoded by transcript ACA1_117120A; uncharacterized protein	complement(join(920429..920449,920604..920894))	Acanthamoeba castellanii str. Neff	14921086
ACA1_117130	CDS	ACA1_117130	NW_004457554.1	921505	923008	D	encoded by transcript ACA1_117130A; eukaryotic initiation factor 4e, putative	join(921505..921916,922028..922265,922355..922442,922519..922596,922677..922807,922894..923008)	Acanthamoeba castellanii str. Neff	14921087
ACA1_117140	CDS	ACA1_117140	NW_004457554.1	923796	926923	D	encoded by transcript ACA1_117140A; GTPase-activator protein for Ras family GTPase	join(923796..923852,923919..923999,924110..924278,924351..924496,924569..924684,924759..924904,925012..925131,925210..925298,925394..925834,925904..926923)	Acanthamoeba castellanii str. Neff	14921088
ACA1_117150	CDS	ACA1_117150	NW_004457554.1	927120	927700	D	encoded by transcript ACA1_117150A; ribosomal protein L34, putative	join(<927120..927228,927315..927446,927552..927700)	Acanthamoeba castellanii str. Neff	14921089
ACA1_117160	CDS	ACA1_117160	NW_004457554.1	927847	930726	R	encoded by transcript ACA1_117160A; K+ channel tetramerization subfamily protein	complement(join(927847..927954,928040..928099,928185..928266,928390..928455,928553..928685,928738..928851,928920..928947,929117..929207,929240..929406,929478..929577,929665..929916,930017..930139,930208..930298,930364..930418,930484..930726))	Acanthamoeba castellanii str. Neff	14921090
ACA1_117170	CDS	ACA1_117170	NW_004457554.1	930888	933754	R	encoded by transcript ACA1_117170A; protein kinase domain containing protein	complement(join(930888..931215,931400..931473,931540..931599,931671..931772,931888..932205,932287..932360,932435..932534,932645..932689,932763..932873,932974..933120,933189..933287,933386..933421,933511..933584,933694..933754))	Acanthamoeba castellanii str. Neff	14921091
ACA1_117180	CDS	ACA1_117180	NW_004457554.1	934208	940519	R	encoded by transcript ACA1_117180A; serine/threonine kinase	complement(join(934208..934400,934467..934547,934609..934939,935020..935228,935350..935560,935630..935879,935936..936113,936194..936410,936491..936744,936821..937220,937300..937546,937622..937923,938004..938223,938293..938525,938547..938728,938801..938941,939014..939563,939634..939874,939947..939989,940072..940390,940456..940519))	Acanthamoeba castellanii str. Neff	14921092
ACA1_117190	CDS	ACA1_117190	NW_004457554.1	940672	942545	R	encoded by transcript ACA1_117190A; uncharacterized protein	complement(join(940672..941319,941347..941578,941603..942330,942396..942545))	Acanthamoeba castellanii str. Neff	14921093
ACA1_117200	CDS	ACA1_117200	NW_004457554.1	943270	948615	R	encoded by transcript ACA1_117200A; Titin, putative	complement(join(943270..943536,943554..943777,943878..943939,944028..944280,944304..944359,944456..944681,944769..944827,944898..945126,945209..945615,945698..945920,945974..946029,946129..946357,946453..946508,946587..946815,946884..946939,947035..947269,947343..947398,947462..947684,947762..947799,947917..948010,948157..948388,948412..948534,948610..948615))	Acanthamoeba castellanii str. Neff	14921094
ACA1_117210	CDS	ACA1_117210	NW_004457554.1	949885	951560	D	encoded by transcript ACA1_117210A; uncharacterized protein	join(949885..950546,950687..950759,950839..950904,950973..951067,951151..951238,951321..951560)	Acanthamoeba castellanii str. Neff	14921095
ACA1_117220	CDS	ACA1_117220	NW_004457554.1	951789	953018	D	encoded by transcript ACA1_117220A; translation elongation factor 1alpha, putative	join(951789..951825,951898..951921,952058..952151,952235..952353,952423..952493,952586..952718,952810..953018)	Acanthamoeba castellanii str. Neff	14921096
ACA1_117230	CDS	ACA1_117230	NW_004457554.1	953066	954326	R	encoded by transcript ACA1_117230A; HPP family protein	complement(join(953066..953244,953316..953459,953527..953702,953773..954326))	Acanthamoeba castellanii str. Neff	14921097
ACA1_117240	CDS	ACA1_117240	NW_004457554.1	954563	961694	R	encoded by transcript ACA1_117240A; p21-activated protein kinase	complement(join(954563..954679,954753..954856,954933..954994,955069..955117,955213..955324,955397..955518,955631..955762,955802..955910,956009..956018,956133..956219,956302..956516,956624..956730,956817..956900,957013..957478,957834..957920,958002..958139,958259..958378,958485..958561,958640..958739,958834..958935,959008..959145,959221..959269,959343..959409,959486..959629,959705..959883,959984..960080,960184..960243,960320..960417,960497..960690,960775..960903,960997..961028,961123..961243,961342..961418,961610..961694))	Acanthamoeba castellanii str. Neff	14921098
ACA1_117250	CDS	ACA1_117250	NW_004457554.1	962020	963282	D	encoded by transcript ACA1_117250A; ubiquinone biosynthesis Omethyltransferase	join(962020..962048,962163..962442,962508..962634,962711..962820,962912..963069,963159..963282)	Acanthamoeba castellanii str. Neff	14921099
ACA1_117260	CDS	ACA1_117260	NW_004457554.1	963446	965026	D	encoded by transcript ACA1_117260A; uncharacterized protein	join(963446..963626,963728..963840,963923..964076,964148..964249,964310..964387,964460..964542,964616..964811,964902..965026)	Acanthamoeba castellanii str. Neff	14921100
ACA1_117270	CDS	ACA1_117270	NW_004457554.1	965499	967666	D	encoded by transcript ACA1_117270A; uncharacterized protein	join(965499..966593,966670..966766,966850..966954,967043..967092,967190..967666)	Acanthamoeba castellanii str. Neff	14921101
ACA1_117280	CDS	ACA1_117280	NW_004457554.1	967738	968495	R	encoded by transcript ACA1_117280A; uncharacterized protein	complement(join(967738..968321,968402..968495))	Acanthamoeba castellanii str. Neff	14921102
ACA1_117290	CDS	ACA1_117290	NW_004457554.1	968951	971174	D	encoded by transcript ACA1_117290A; protein kinase	join(968951..969711,969776..970356,970441..970567,970649..970890,970966..971174)	Acanthamoeba castellanii str. Neff	14921103
ACA1_117300	CDS	ACA1_117300	NW_004457554.1	971405	972136	R	encoded by transcript ACA1_117300A; uncharacterized protein	complement(join(971405..971474,971569..971702,971768..971884,971960..972136))	Acanthamoeba castellanii str. Neff	14921104
ACA1_117310	CDS	ACA1_117310	NW_004457554.1	972305	973484	D	encoded by transcript ACA1_117310A; uncharacterized protein	join(972305..972499,972591..972852,972914..972951,973025..973145,973211..973328,973403..973484)	Acanthamoeba castellanii str. Neff	14921105
ACA1_117320	CDS	ACA1_117320	NW_004457554.1	973575	976467	R	encoded by transcript ACA1_117320A; FAD binding domain containing protein	complement(join(973575..973716,973793..973879,973967..974148,974222..974584,974668..974825,974899..975026,975095..975172,975260..975536,975602..975697,975774..975882,975969..976028,976107..976186,976275..976467))	Acanthamoeba castellanii str. Neff	14921106
ACA1_117330	CDS	ACA1_117330	NW_004457554.1	976797	979152	D	encoded by transcript ACA1_117330A; hydroxylamine reductase	join(976797..977184,977313..977557,977662..978175,978288..978414,978486..979152)	Acanthamoeba castellanii str. Neff	14921107
ACA1_117350	CDS	ACA1_117350	NW_004457554.1	983118	984577	D	encoded by transcript ACA1_117350A; uncharacterized protein	join(983118..983227,983332..983651,983790..983860,984032..984451,984497..984577)	Acanthamoeba castellanii str. Neff	14921109
ACA1_006680	CDS	ACA1_006680	NW_004457552.1	350	1016	D	encoded by transcript ACA1_006680A; arginine deiminase	join(350..496,626..815,886..1016)	Acanthamoeba castellanii str. Neff	14920734
ACA1_006790	CDS	ACA1_006790	NW_004457552.1	3125	4304	D	encoded by transcript ACA1_006790A; uncharacterized protein	join(3125..3215,3287..3439,3841..3935,4092..4304)	Acanthamoeba castellanii str. Neff	14920733
ACA1_007000	CDS	ACA1_007000	NW_004457552.1	7032	8371	D	encoded by transcript ACA1_007000A; uncharacterized protein	join(7032..7161,7246..7291,7406..7523,7628..7719,7836..8163,8237..8371)	Acanthamoeba castellanii str. Neff	14920731
ACA1_007010	CDS	ACA1_007010	NW_004457552.1	8983	11092	D	encoded by transcript ACA1_007010A; uncharacterized protein	join(8983..9001,9080..9399,9470..9571,9662..9782,9870..10057,10121..11092)	Acanthamoeba castellanii str. Neff	14920732
ACA1_049530	CDS	ACA1_049530	NW_004457549.1	777	1384	R	encoded by transcript ACA1_049530A; mitochondrial RNA ligase 2, putative	complement(join(<777..849,1001..1218,1286..1384))	Acanthamoeba castellanii str. Neff	14920730
ACA1_049640	CDS	ACA1_049640	NW_004457549.1	2966	3859	R	encoded by transcript ACA1_049640A; uncharacterized protein	complement(2966..3859)	Acanthamoeba castellanii str. Neff	14920691
ACA1_049750	CDS	ACA1_049750	NW_004457549.1	7072	7494	R	encoded by transcript ACA1_049750A; cysteine proteinase	complement(join(<7072..7216,7346..7494))	Acanthamoeba castellanii str. Neff	14920692
ACA1_049760	CDS	ACA1_049760	NW_004457549.1	8417	10005	R	encoded by transcript ACA1_049760A; phosphate regulon sensor kinase PhoR	complement(join(8417..8555,9224..9614,9696..10005))	Acanthamoeba castellanii str. Neff	14920693
ACA1_049990	CDS	ACA1_049990	NW_004457549.1	22784	25150	D	encoded by transcript ACA1_049990A; aldehyde dehydrogenase (NAD) family superfamily protein	join(22784..22933,23043..23249,23343..23470,23581..23814,23907..23971,24079..24465,24683..24824,24955..25150)	Acanthamoeba castellanii str. Neff	14920696
ACA1_050000	CDS	ACA1_050000	NW_004457549.1	25237	27554	R	encoded by transcript ACA1_050000A; uncharacterized protein	complement(join(25237..25504,25588..25646,25714..25842,25957..26100,26208..26309,26413..26548,26672..27309,27477..27554))	Acanthamoeba castellanii str. Neff	14920697
ACA1_050010	CDS	ACA1_050010	NW_004457549.1	27732	30148	D	encoded by transcript ACA1_050010A; uncharacterized protein	join(27732..28061,28240..28317,28824..28967,29076..29182,29269..29408,29525..29647,29742..30148)	Acanthamoeba castellanii str. Neff	14920698
ACA1_050120	CDS	ACA1_050120	NW_004457549.1	32522	35436	D	encoded by transcript ACA1_050120A; transporter, major facilitator subfamily protein	join(32522..32691,32841..32938,33069..33176,33250..33380,33574..33739,33813..33902,34108..34395,34495..34586,34707..34881,34976..35436)	Acanthamoeba castellanii str. Neff	14920699
ACA1_050130	CDS	ACA1_050130	NW_004457549.1	35909	37718	D	encoded by transcript ACA1_050130A; uncharacterized protein	join(35909..35954,36051..36148,36217..36329,36471..36705,36760..36942,37149..37208,37354..37416,37482..37537,37646..37718)	Acanthamoeba castellanii str. Neff	14920700
ACA1_050140	CDS	ACA1_050140	NW_004457549.1	37807	41216	R	encoded by transcript ACA1_050140A; isopentenyldiphosphate delta-isomerase	complement(join(37807..37955,38038..38208,38303..38428,38536..38600,38674..38725,38805..38865,39087..39209,39280..39429,39502..39599,39685..39837,39981..40048,40131..40276,40386..40509,40628..40687,40753..40891,41012..41216))	Acanthamoeba castellanii str. Neff	14920701
ACA1_050150	CDS	ACA1_050150	NW_004457549.1	41699	42756	D	encoded by transcript ACA1_050150A; Glutathione Stransferase	join(41699..41769,41841..41937,42003..42070,42159..42274,42333..42556,42628..42756)	Acanthamoeba castellanii str. Neff	14920702
ACA1_050170	CDS	ACA1_050170	NW_004457549.1	47237	47672	R	encoded by transcript ACA1_050170A; uncharacterized protein	complement(join(47237..47416,47547..47672))	Acanthamoeba castellanii str. Neff	14920704
ACA1_050180	CDS	ACA1_050180	NW_004457549.1	48237	49984	D	encoded by transcript ACA1_050180A; oxidoreductase, aldo/keto reductase, putative	join(48237..48294,48368..48448,48550..48628,48715..48820,48940..49070,49159..49328,49602..49759,49841..49984)	Acanthamoeba castellanii str. Neff	14920705
ACA1_050190	CDS	ACA1_050190	NW_004457549.1	50635	52188	R	encoded by transcript ACA1_050190A; TBC domain containing protein	complement(join(50635..50798,50882..50991,51100..51420,51547..51705,51784..51890,52021..52188))	Acanthamoeba castellanii str. Neff	14920706
ACA1_050200	CDS	ACA1_050200	NW_004457549.1	53339	55126	D	encoded by transcript ACA1_050200A; mammalian PTEN tumor suppressorlike, putative	join(53339..53420,53519..53649,53737..53819,53917..54124,54190..54318,54387..54470,54560..54739,54831..54929,55016..55126)	Acanthamoeba castellanii str. Neff	14920707
ACA1_050210	CDS	ACA1_050210	NW_004457549.1	55413	57722	D	encoded by transcript ACA1_050210A; uncharacterized protein	join(55413..55467,55571..55657,55754..55795,55978..56050,56147..56242,56333..56391,56494..56519,56814..56882,56964..57275,57349..57403,57471..57573,57659..57722)	Acanthamoeba castellanii str. Neff	14920708
ACA1_050220	CDS	ACA1_050220	NW_004457549.1	59596	61254	R	encoded by transcript ACA1_050220A; uncharacterized protein	complement(join(59596..60011,60173..60292,60414..60467,60551..60683,60807..60835,61032..>61254))	Acanthamoeba castellanii str. Neff	14920709
ACA1_050330	CDS	ACA1_050330	NW_004457549.1	62355	66932	R	encoded by transcript ACA1_050330A; uncharacterized protein	complement(join(62355..62366,62441..62627,62738..62827,62925..63021,63084..63178,63244..64634,64718..66097,66213..66932))	Acanthamoeba castellanii str. Neff	14920710
ACA1_050340	CDS	ACA1_050340	NW_004457549.1	68009	72183	R	encoded by transcript ACA1_050340A; K+ channel tetramerization subfamily protein	complement(join(68009..68193,68255..68371,68447..68520,68593..69008,69090..69173,69249..69332,69410..69471,69538..69890,70010..72183))	Acanthamoeba castellanii str. Neff	14920711
ACA1_050350	CDS	ACA1_050350	NW_004457549.1	73346	76407	R	encoded by transcript ACA1_050350A; major facilitator family transporter, putative	complement(join(73346..73483,73643..73779,73853..73919,73998..74120,74184..74225,74248..74254,74350..74453,74659..74860,74946..75093,75179..75277,75357..75485,75573..75668,75776..75891,76006..76082,76186..76407))	Acanthamoeba castellanii str. Neff	14920712
ACA1_050360	CDS	ACA1_050360	NW_004457549.1	76812	78888	R	encoded by transcript ACA1_050360A; 2,3bisphosphoglycerate-independent phosphoglycerate mutase-like protein	complement(join(76812..77208,77299..77425,77522..77612,77682..77810,77944..77953,78032..78067,78180..78236,78299..78405,78511..78586,78662..78888))	Acanthamoeba castellanii str. Neff	14920713
ACA1_050370	CDS	ACA1_050370	NW_004457549.1	79305	82103	D	encoded by transcript ACA1_050370A; Fbox domain containing protein	join(79305..79319,79525..79968,80090..80251,80332..80428,80506..80595,80678..80706,80824..80854,80931..81049,81126..81248,81346..81451,81538..81570,81681..81757,81837..81891,81979..82103)	Acanthamoeba castellanii str. Neff	14920714
ACA1_050380	CDS	ACA1_050380	NW_004457549.1	83204	84877	D	encoded by transcript ACA1_050380A; uncharacterized protein	join(83204..83402,83482..83705,83790..84330,84414..84877)	Acanthamoeba castellanii str. Neff	14920715
ACA1_050390	CDS	ACA1_050390	NW_004457549.1	84847	85635	R	encoded by transcript ACA1_050390A; 3-oxoacyl-[acyl-carrier protein] reductase	complement(join(84847..84870,84939..85025,85115..85233,85341..85635))	Acanthamoeba castellanii str. Neff	14920716
ACA1_050400	CDS	ACA1_050400	NW_004457549.1	85931	86636	D	encoded by transcript ACA1_050400A; cyst specific protein, putative	join(85931..86032,86101..86277,86352..86493,86569..86636)	Acanthamoeba castellanii str. Neff	14920717
ACA1_050410	CDS	ACA1_050410	NW_004457549.1	87175	87802	D	encoded by transcript ACA1_050410A; Fbox domain containing protein	join(87175..87282,87342..87406,87472..87575,87645..87802)	Acanthamoeba castellanii str. Neff	14920718
ACA1_050420	CDS	ACA1_050420	NW_004457549.1	87848	88662	D	encoded by transcript ACA1_050420A; uncharacterized protein	join(87848..88373,88433..88662)	Acanthamoeba castellanii str. Neff	14920719
ACA1_050430	CDS	ACA1_050430	NW_004457549.1	88736	90107	R	encoded by transcript ACA1_050430A; dual specificity protein phosphatase	complement(join(88736..89203,89267..89482,89583..89678,89779..89966,90062..90107))	Acanthamoeba castellanii str. Neff	14920720
ACA1_050440	CDS	ACA1_050440	NW_004457549.1	90501	91563	R	encoded by transcript ACA1_050440A; ankyrin repeat containing protein	complement(join(90501..90695,90817..90929,91047..91563))	Acanthamoeba castellanii str. Neff	14920721
ACA1_050450	CDS	ACA1_050450	NW_004457549.1	91706	92327	D	encoded by transcript ACA1_050450A; LIM domain containing protein	join(91706..91754,91839..91877,91991..92143,92218..92327)	Acanthamoeba castellanii str. Neff	14920722
ACA1_050460	CDS	ACA1_050460	NW_004457549.1	92479	94594	D	encoded by transcript ACA1_050460A; solute carrier family protein, putative	join(92479..92558,92675..92715,92813..92915,93049..93266,93420..93578,93663..93737,93832..93978,94065..94172,94244..94321,94401..94594)	Acanthamoeba castellanii str. Neff	14920723
ACA1_050470	CDS	ACA1_050470	NW_004457549.1	94775	97068	D	encoded by transcript ACA1_050470A; uncharacterized protein	join(94775..95314,95347..95488,95553..95652,95723..96445,96543..97068)	Acanthamoeba castellanii str. Neff	14920724
ACA1_050480	CDS	ACA1_050480	NW_004457549.1	97350	105047	D	encoded by transcript ACA1_050480A; uncharacterized protein	join(97350..97474,97538..97624,97760..99515,99585..100733,100848..104562,104653..105047)	Acanthamoeba castellanii str. Neff	14920725
ACA1_050490	CDS	ACA1_050490	NW_004457549.1	105203	106263	R	encoded by transcript ACA1_050490A; Cation binding subfamily protein	complement(join(105203..105307,105379..105513,105591..105684,105748..105818,105899..105969,106052..106120,106197..106263))	Acanthamoeba castellanii str. Neff	14920726
ACA1_050500	CDS	ACA1_050500	NW_004457549.1	106649	108272	R	encoded by transcript ACA1_050500A; MORN repeatcontaining protein	complement(join(106649..106972,107046..107134,107196..107314,107386..107672,107749..107817,107882..108080,108175..108272))	Acanthamoeba castellanii str. Neff	14920727
ACA1_050510	CDS	ACA1_050510	NW_004457549.1	109122	109979	D	encoded by transcript ACA1_050510A; thioesterase family protein	join(109122..109193,109262..109363,109438..109512,109599..109705,109775..109979)	Acanthamoeba castellanii str. Neff	14920728
ACA1_050520	CDS	ACA1_050520	NW_004457549.1	110225	112573	D	encoded by transcript ACA1_050520A; uncharacterized protein	join(110225..110291,110372..110485,110620..110713,110823..111018,111083..111158,111230..111255,111363..111522,111610..111696,111781..111879,111961..112116,112233..112323,112463..112479,112515..112573)	Acanthamoeba castellanii str. Neff	14920729
ACA1_009160	CDS	ACA1_009160	NW_004457547.1	50	818	D	encoded by transcript ACA1_009160A; uncharacterized protein	join(<50..502,621..818)	Acanthamoeba castellanii str. Neff	14920690
ACA1_009170	CDS	ACA1_009170	NW_004457547.1	1141	4219	D	encoded by transcript ACA1_009170A; serine/threonine protein kinase	join(1141..1243,1467..1566,1669..1717,1867..2010,2163..2471,2538..2851,2963..3321,3408..3480,3545..3737,3881..3958,4028..4219)	Acanthamoeba castellanii str. Neff	14920689
ACA1_009280	CDS	ACA1_009280	NW_004457547.1	5424	5740	D	encoded by transcript ACA1_009280A; Serine/threonineprotein kinase	join(5424..5612,5635..5699,5725..5740)	Acanthamoeba castellanii str. Neff	14920688
ACA1_133110	CDS	ACA1_133110	NW_004457545.1	173	301	D	encoded by transcript ACA1_133110A; uncharacterized protein	173..301	Acanthamoeba castellanii str. Neff	14920687
ACA1_133120	CDS	ACA1_133120	NW_004457545.1	2016	3478	R	encoded by transcript ACA1_133120A; methyltransferase, putatative	complement(join(2016..2183,2283..2423,2496..2642,2734..2816,2921..2967,3037..3079,3148..3179,3363..>3478))	Acanthamoeba castellanii str. Neff	14920649
ACA1_133130	CDS	ACA1_133130	NW_004457545.1	5146	6724	D	encoded by transcript ACA1_133130A; Helixloop-helix DNA-binding domain containing protein	join(5146..5306,5641..6566,6699..6724)	Acanthamoeba castellanii str. Neff	14920650
ACA1_133140	CDS	ACA1_133140	NW_004457545.1	7254	10586	R	encoded by transcript ACA1_133140A; Magnesium-ATPase	complement(join(7254..8004,8095..8185,8261..8380,8451..8606,8670..8821,8897..9184,9254..9359,9421..9507,9577..9764,9824..10071,10142..10474,10566..10586))	Acanthamoeba castellanii str. Neff	14920641
ACA1_133150	CDS	ACA1_133150	NW_004457545.1	10678	12297	R	encoded by transcript ACA1_133150A; Ptype transporting ATPase-like protein	complement(join(10678..10859,10939..11072,11147..11242,11312..11393,11459..11555,11618..11781,11860..11988,12114..12297))	Acanthamoeba castellanii str. Neff	14920642
ACA1_133160	CDS	ACA1_133160	NW_004457545.1	12760	13669	D	encoded by transcript ACA1_133160A; uncharacterized protein	join(12760..13576,13647..13669)	Acanthamoeba castellanii str. Neff	14920643
ACA1_133170	CDS	ACA1_133170	NW_004457545.1	13775	15938	D	encoded by transcript ACA1_133170A; threonine synthase	join(13775..14246,14326..14414,14483..14570,14643..14774,14867..15007,15097..15147,15248..15372,15453..15608,15702..15938)	Acanthamoeba castellanii str. Neff	14920644
ACA1_133180	CDS	ACA1_133180	NW_004457545.1	16436	17389	R	encoded by transcript ACA1_133180A; Ser/Thr phosphatase family superfamily protein	complement(16436..17389)	Acanthamoeba castellanii str. Neff	14920645
ACA1_133200	CDS	ACA1_133200	NW_004457545.1	19038	24787	R	encoded by transcript ACA1_133200A; protein kinase domain containing protein	complement(join(19038..19929,20020..20160,20247..20338,20415..22016,22116..22231,22321..22443,22509..22613,22710..22879,22970..23070,23161..24305,24601..24787))	Acanthamoeba castellanii str. Neff	14920647
ACA1_133210	CDS	ACA1_133210	NW_004457545.1	25509	27039	D	encoded by transcript ACA1_133210A; SH3 domain containing protein	join(25509..25632,25700..25830,25906..26085,26146..26265,26335..27039)	Acanthamoeba castellanii str. Neff	14920648
ACA1_133320	CDS	ACA1_133320	NW_004457545.1	29151	31711	D	encoded by transcript ACA1_133320A; homeobox domain containing protein	join(29151..29877,29998..30087,30121..30431,30462..31061,31083..31138,31231..31451,31524..31711)	Acanthamoeba castellanii str. Neff	14920651
ACA1_133330	CDS	ACA1_133330	NW_004457545.1	31903	33984	D	encoded by transcript ACA1_133330A; LisH protein	join(31903..32071,32183..32322,32395..32445,32549..32724,32830..32999,33147..33253,33323..33384,33475..33577,33663..33817,33921..33984)	Acanthamoeba castellanii str. Neff	14920652
ACA1_133340	CDS	ACA1_133340	NW_004457545.1	34057	35563	R	encoded by transcript ACA1_133340A; SAM domain (Sterile alpha motif) domain containing protein	complement(join(34057..34977,35046..35220,35295..35563))	Acanthamoeba castellanii str. Neff	14920653
ACA1_133350	CDS	ACA1_133350	NW_004457545.1	35753	37519	R	encoded by transcript ACA1_133350A; acyltransferase domain containing protein	complement(join(35753..35983,36055..36253,36330..36463,36576..36672,36773..36873,36967..37041,37139..37253,37329..37519))	Acanthamoeba castellanii str. Neff	14920654
ACA1_133360	CDS	ACA1_133360	NW_004457545.1	37677	38459	R	encoded by transcript ACA1_133360A; uncharacterized protein	complement(join(37677..37809,37879..37945,38021..38082,38103..38232,38294..38459))	Acanthamoeba castellanii str. Neff	14920655
ACA1_133370	CDS	ACA1_133370	NW_004457545.1	38701	40748	R	encoded by transcript ACA1_133370A; uncharacterized protein	complement(join(38701..38840,38925..39283,39353..39496,39610..40748))	Acanthamoeba castellanii str. Neff	14920656
ACA1_133380	CDS	ACA1_133380	NW_004457545.1	40816	41701	R	encoded by transcript ACA1_133380A; neurochondrin, putative	complement(join(40816..41482,41565..>41701))	Acanthamoeba castellanii str. Neff	14920657
ACA1_133390	CDS	ACA1_133390	NW_004457545.1	41856	45447	R	encoded by transcript ACA1_133390A; uncharacterized protein	complement(join(41856..41931,42146..42771,42861..42974,43034..43077,43304..43631,43704..43843,43925..44038,44121..44246,44311..44338,44401..44570,44635..44743,44865..45081,45180..45276,45348..45447))	Acanthamoeba castellanii str. Neff	14920658
ACA1_133400	CDS	ACA1_133400	NW_004457545.1	45699	47224	R	encoded by transcript ACA1_133400A; uncharacterized protein	complement(join(45699..45856,45895..46132,46217..46687,46719..47115,47184..47224))	Acanthamoeba castellanii str. Neff	14920659
ACA1_133410	CDS	ACA1_133410	NW_004457545.1	48025	49678	R	encoded by transcript ACA1_133410A; EF hand domain containing protein	complement(join(48025..48088,48155..48314,48393..48569,48650..48685,48760..48843,48918..49073,49142..49336,49447..49678))	Acanthamoeba castellanii str. Neff	14920660
ACA1_133420	CDS	ACA1_133420	NW_004457545.1	49807	50100	D	encoded by transcript ACA1_133420A; uncharacterized protein	join(49807..49977,50047..50100)	Acanthamoeba castellanii str. Neff	14920661
ACA1_133430	CDS	ACA1_133430	NW_004457545.1	50258	51510	D	encoded by transcript ACA1_133430A; integral membrane family protein	join(50258..50524,50601..50728,50812..50902,50965..51144,51238..51363,51442..51510)	Acanthamoeba castellanii str. Neff	14920662
ACA1_133440	CDS	ACA1_133440	NW_004457545.1	52064	54538	R	encoded by transcript ACA1_133440A; zinc finger domain containing protein	complement(join(52064..52793,53046..54538))	Acanthamoeba castellanii str. Neff	14920663
ACA1_133450	CDS	ACA1_133450	NW_004457545.1	55572	60540	D	encoded by transcript ACA1_133450A; HECT-domain (ubiquitin-transferase) domain containing protein	join(55572..55591,55717..55787,55889..56467,56487..56641,56715..56798,56888..57010,57116..57234,57333..57463,57565..57673,57792..58527,58628..58774,58889..59054,59094..59182,59313..59429,59536..59613,59704..59791,59870..59967,60071..60189,60276..60540)	Acanthamoeba castellanii str. Neff	14920664
ACA1_133460	CDS	ACA1_133460	NW_004457545.1	60632	61491	D	encoded by transcript ACA1_133460A; MACRO domain containing 2 isoform 1, putative	join(60632..60893,60986..61200,61315..61491)	Acanthamoeba castellanii str. Neff	14920665
ACA1_133470	CDS	ACA1_133470	NW_004457545.1	61507	63588	R	encoded by transcript ACA1_133470A; actin subfamily protein	complement(join(61507..61817,61887..61987,62071..62230,62317..62332,62373..62521,62592..62726,62825..62984,63012..63129,63205..63251,63324..63475,63525..63588))	Acanthamoeba castellanii str. Neff	14920666
ACA1_133480	CDS	ACA1_133480	NW_004457545.1	63855	64840	D	encoded by transcript ACA1_133480A; uncharacterized protein	join(63855..63897,63909..64015,64076..64173,64235..64308,64392..64483,64565..64673,64737..64840)	Acanthamoeba castellanii str. Neff	14920667
ACA1_133490	CDS	ACA1_133490	NW_004457545.1	65446	67650	D	encoded by transcript ACA1_133490A; uncharacterized protein	join(65446..65612,65697..65743,65822..65981,66049..66167,66266..66576,66695..66813,66893..67005,67073..67165,67252..67343,67441..67650)	Acanthamoeba castellanii str. Neff	14920668
ACA1_133500	CDS	ACA1_133500	NW_004457545.1	68616	71885	D	encoded by transcript ACA1_133500A; uncharacterized protein	68616..71885	Acanthamoeba castellanii str. Neff	14920669
ACA1_133510	CDS	ACA1_133510	NW_004457545.1	72470	74538	D	encoded by transcript ACA1_133510A; domain found in dishevelled, egl10, and pleckstrin domain containing protein	join(72470..72502,72599..72695,72773..72864,72932..73006,73113..73196,73284..73371,73454..73539,73637..73816,73961..74025,74147..74275,74382..74538)	Acanthamoeba castellanii str. Neff	14920670
ACA1_133520	CDS	ACA1_133520	NW_004457545.1	74873	75760	D	encoded by transcript ACA1_133520A; phosphotransferase enzyme family protein	join(74873..74939,74967..75760)	Acanthamoeba castellanii str. Neff	14920671
ACA1_133530	CDS	ACA1_133530	NW_004457545.1	75964	76638	D	encoded by transcript ACA1_133530A; uncharacterized protein	75964..76638	Acanthamoeba castellanii str. Neff	14920672
ACA1_133540	CDS	ACA1_133540	NW_004457545.1	76813	78060	D	encoded by transcript ACA1_133540A; signal recognition particle receptor subunit beta, putative	join(76813..76854,76943..77053,77236..77341,77441..77549,77634..77765,77862..78060)	Acanthamoeba castellanii str. Neff	14920673
ACA1_133550	CDS	ACA1_133550	NW_004457545.1	78421	79307	D	encoded by transcript ACA1_133550A; betalactamase domain protein	join(78421..78481,78544..78717,78791..78927,78987..79089,79147..79307)	Acanthamoeba castellanii str. Neff	14920674
ACA1_133560	CDS	ACA1_133560	NW_004457545.1	79841	86432	D	encoded by transcript ACA1_133560A; leucine rich repeat domain containing protein	join(79841..79859,80010..80273,80360..80454,80534..80626,80704..80838,80910..81128,81210..81372,81454..81750,81818..81956,82037..82148,82235..82317,82395..82829,82891..83026,83112..84003,84078..84331,84414..84760,84832..86173,86253..86432)	Acanthamoeba castellanii str. Neff	14920675
ACA1_133570	CDS	ACA1_133570	NW_004457545.1	86570	87490	R	encoded by transcript ACA1_133570A; uncharacterized protein	complement(join(86570..86946,87107..87308,87350..87490))	Acanthamoeba castellanii str. Neff	14920676
ACA1_133580	CDS	ACA1_133580	NW_004457545.1	87614	89338	D	encoded by transcript ACA1_133580A; uncharacterized protein	join(87614..88013,88084..88575,88712..88882,88962..89113,89213..89338)	Acanthamoeba castellanii str. Neff	14920677
ACA1_133590	CDS	ACA1_133590	NW_004457545.1	89550	91408	R	encoded by transcript ACA1_133590A; uncharacterized protein	complement(join(89550..89660,89755..89865,90020..90285,90359..90639,90716..90786,90890..91014,91282..91408))	Acanthamoeba castellanii str. Neff	14920678
ACA1_133600	CDS	ACA1_133600	NW_004457545.1	91639	94250	R	encoded by transcript ACA1_133600A; gelation factor, putative	complement(join(91639..93394,93554..93725,93833..94070,94209..94250))	Acanthamoeba castellanii str. Neff	14920679
ACA1_133610	CDS	ACA1_133610	NW_004457545.1	94605	95348	R	encoded by transcript ACA1_133610A; Calponin domain containing protein	complement(join(94605..94633,94736..94819,94931..95168,95307..95348))	Acanthamoeba castellanii str. Neff	14920680
ACA1_133720	CDS	ACA1_133720	NW_004457545.1	95880	97100	D	encoded by transcript ACA1_133720A; uncharacterized protein	join(95880..96746,96813..97100)	Acanthamoeba castellanii str. Neff	14920681
ACA1_133730	CDS	ACA1_133730	NW_004457545.1	97372	98764	D	encoded by transcript ACA1_133730A; uncharacterized protein	join(97372..98370,98480..98764)	Acanthamoeba castellanii str. Neff	14920682
ACA1_133740	CDS	ACA1_133740	NW_004457545.1	99022	99295	R	encoded by transcript ACA1_133740A; uncharacterized protein	complement(join(99022..99102,99182..99295))	Acanthamoeba castellanii str. Neff	14920683
ACA1_133850	CDS	ACA1_133850	NW_004457545.1	99495	99973	R	encoded by transcript ACA1_133850A; uncharacterized protein	complement(join(99495..99509,99523..99651,99719..99973))	Acanthamoeba castellanii str. Neff	14920684
ACA1_133860	CDS	ACA1_133860	NW_004457545.1	100321	100996	R	encoded by transcript ACA1_133860A; olfactory receptor, family 6, subfamily C, member 76, putative	complement(join(100321..100502,100566..100687,100761..100804,100874..>100996))	Acanthamoeba castellanii str. Neff	14920685
ACA1_133970	CDS	ACA1_133970	NW_004457545.1	101953	102274	R	encoded by transcript ACA1_133970A; uncharacterized protein	complement(join(101953..102033,102113..>102274))	Acanthamoeba castellanii str. Neff	14920686
ACA1_124010	CDS	ACA1_124010	NW_004457542.1	77	2292	R	encoded by transcript ACA1_124010A; uncharacterized protein	complement(join(77..182,299..420,537..635,788..965,1054..1196,1455..1625,1719..1867,2058..2292))	Acanthamoeba castellanii str. Neff	14920634
ACA1_124120	CDS	ACA1_124120	NW_004457542.1	2636	3168	R	encoded by transcript ACA1_124120A; cAMP protein kinase regulatory chain, putative	complement(join(2636..2704,2799..2875,2984..3047,3121..3168))	Acanthamoeba castellanii str. Neff	14920633
ACA1_124230	CDS	ACA1_124230	NW_004457542.1	5122	6594	R	encoded by transcript ACA1_124230A; 3',5'-cyclic-GMP phosphodiesterase	complement(join(<5122..5213,5376..5508,5634..5713,5780..5846,5950..6063,6082..6469,6578..6594))	Acanthamoeba castellanii str. Neff	14920636
ACA1_124240	CDS	ACA1_124240	NW_004457542.1	7105	8253	R	encoded by transcript ACA1_124240A; uncharacterized protein	complement(join(7105..7160,7240..7291,7373..7466,7545..7660,7734..7850,7953..8006,8122..8253))	Acanthamoeba castellanii str. Neff	14920638
ACA1_124250	CDS	ACA1_124250	NW_004457542.1	8456	9130	R	encoded by transcript ACA1_124250A; transmembrane proteins 14c protein	complement(join(8456..8682,8805..8902,9006..9130))	Acanthamoeba castellanii str. Neff	14920639
ACA1_124260	CDS	ACA1_124260	NW_004457542.1	9244	10213	R	encoded by transcript ACA1_124260A; glycerol-3-phosphate dehydrogenase, putative	complement(join(9244..9493,9876..10213))	Acanthamoeba castellanii str. Neff	14920640
ACA1_124470	CDS	ACA1_124470	NW_004457542.1	14834	15366	D	encoded by transcript ACA1_124470A; uncharacterized protein	join(14834..14870,15085..15278,15325..15366)	Acanthamoeba castellanii str. Neff	14920637
ACA1_124480	CDS	ACA1_124480	NW_004457542.1	17254	17864	R	encoded by transcript ACA1_124480A; uncharacterized protein	complement(join(17254..17487,17577..17710,17801..17864))	Acanthamoeba castellanii str. Neff	14920635
ACA1_124590	CDS	ACA1_124590	NW_004457542.1	22969	24280	D	encoded by transcript ACA1_124590A; peptide synthetase, putative	join(22969..22991,23112..23246,23293..23489,23616..23711,23791..23937,24027..>24280)	Acanthamoeba castellanii str. Neff	14920632
ACA1_197290	CDS	ACA1_197290	NW_004457538.1	77	725	D	encoded by transcript ACA1_197290A; uncharacterized protein	join(<77..168,253..356,424..725)	Acanthamoeba castellanii str. Neff	14920631
ACA1_197300	CDS	ACA1_197300	NW_004457538.1	770	1560	R	encoded by transcript ACA1_197300A; uncharacterized protein	complement(join(770..918,995..1069,1154..1400,1498..1560))	Acanthamoeba castellanii str. Neff	14920403
ACA1_197310	CDS	ACA1_197310	NW_004457538.1	3890	4260	R	encoded by transcript ACA1_197310A; uncharacterized protein	complement(join(3890..4171,4195..>4260))	Acanthamoeba castellanii str. Neff	14920404
ACA1_197320	CDS	ACA1_197320	NW_004457538.1	4370	5472	R	encoded by transcript ACA1_197320A; uncharacterized protein	complement(join(4370..5322,5391..5472))	Acanthamoeba castellanii str. Neff	14920405
ACA1_197330	CDS	ACA1_197330	NW_004457538.1	5752	7628	R	encoded by transcript ACA1_197330A; DnaJ domain containing protein	complement(join(5752..6171,6347..6409,6491..6686,6757..6902,6993..7087,7213..7314,7366..7472,7573..7628))	Acanthamoeba castellanii str. Neff	14920406
ACA1_197440	CDS	ACA1_197440	NW_004457538.1	7814	10043	R	encoded by transcript ACA1_197440A; G-protein beta WD-40 repeat domain containing protein	complement(join(7814..7856,7927..8028,8104..8222,8293..8351,8424..8606,8694..8804,8882..8960,9038..9169,9251..9353,9447..9537,9628..9735,9800..10043))	Acanthamoeba castellanii str. Neff	14920407
ACA1_197450	CDS	ACA1_197450	NW_004457538.1	10692	11923	R	encoded by transcript ACA1_197450A; Malonyl-CoA decarboxylase	complement(join(10692..10916,10993..11127,11200..11291,11355..11462,11537..11608,11684..11768,11849..11923))	Acanthamoeba castellanii str. Neff	14920408
ACA1_197460	CDS	ACA1_197460	NW_004457538.1	11942	12511	R	encoded by transcript ACA1_197460A; uncharacterized protein	complement(join(11942..12091,12153..12314,12380..12511))	Acanthamoeba castellanii str. Neff	14920409
ACA1_197470	CDS	ACA1_197470	NW_004457538.1	13264	19917	D	encoded by transcript ACA1_197470A; ATPase/histidine kinase/DNA gyrase B/HSP90 domain containing protein	join(13264..13431,13584..13739,13944..14131,14235..14374,14630..14763,14872..14987,15076..15168,15267..15404,15488..15667,15750..15854,15969..16053,16136..16231,16338..16543,16614..16768,16951..17025,17206..17277,17373..17863,17978..18089,18172..18281,18574..18917,19002..19316,19414..19733,19862..19917)	Acanthamoeba castellanii str. Neff	14920410
ACA1_197480	CDS	ACA1_197480	NW_004457538.1	20136	22211	D	encoded by transcript ACA1_197480A; ATPase/histidine kinase/DNA gyrase B/HSP90 domain containing protein	join(<20136..20242,20313..20465,20550..20942,21011..21098,21161..21234,21391..21574,21660..21881,22014..22211)	Acanthamoeba castellanii str. Neff	14920411
ACA1_197490	CDS	ACA1_197490	NW_004457538.1	22486	26044	D	encoded by transcript ACA1_197490A; uncharacterized protein	join(22486..22538,22704..22836,22972..23075,23203..23284,23394..23570,23724..23955,24071..24424,24544..24728,24827..25055,25127..25481,25567..25643,25959..26044)	Acanthamoeba castellanii str. Neff	14920412
ACA1_197600	CDS	ACA1_197600	NW_004457538.1	26540	28087	R	encoded by transcript ACA1_197600A; BRCA1/BRCA2containing complex subunit 3, putative	complement(join(26540..26611,26740..26872,26962..27179,27319..27404,27514..27601,27729..27798,27891..27943,28025..28087))	Acanthamoeba castellanii str. Neff	14920413
ACA1_197610	CDS	ACA1_197610	NW_004457538.1	28527	32515	R	encoded by transcript ACA1_197610A; uncharacterized protein	complement(join(28527..28652,29886..30084,30207..30431,30542..30704,30827..31138,31219..31330,31422..31489,31625..31667,31715..31827,31930..32136,32368..32515))	Acanthamoeba castellanii str. Neff	14920414
ACA1_197720	CDS	ACA1_197720	NW_004457538.1	33600	34443	D	encoded by transcript ACA1_197720A; uncharacterized protein	join(33600..33800,33881..34105,34235..34350,34425..34443)	Acanthamoeba castellanii str. Neff	14920415
ACA1_197730	CDS	ACA1_197730	NW_004457538.1	34481	37993	R	encoded by transcript ACA1_197730A; uncharacterized protein	complement(join(34481..34619,34700..34890,35020..35571,35661..35771,35897..36034,36123..36266,36282..37052,37126..37428,37548..37717,37849..37993))	Acanthamoeba castellanii str. Neff	14920416
ACA1_197840	CDS	ACA1_197840	NW_004457538.1	38331	39146	D	encoded by transcript ACA1_197840A; uncharacterized protein	38331..39146	Acanthamoeba castellanii str. Neff	14920417
ACA1_197850	CDS	ACA1_197850	NW_004457538.1	39216	40920	R	encoded by transcript ACA1_197850A; HAD hydrolase, family IIA subfamily protein	complement(join(39216..39375,39505..39614,39698..39797,39885..39981,40110..40179,40275..40430,40514..40621,40720..>40920))	Acanthamoeba castellanii str. Neff	14920418
ACA1_197860	CDS	ACA1_197860	NW_004457538.1	41413	42876	D	encoded by transcript ACA1_197860A; glucosamine6-phosphate deaminase	join(41413..41562,41692..41767,41859..41974,42063..42144,42273..42328,42396..42497,42576..42737,42826..42876)	Acanthamoeba castellanii str. Neff	14920419
ACA1_197870	CDS	ACA1_197870	NW_004457538.1	43245	45202	D	encoded by transcript ACA1_197870A; protein phosphatase 2C domain containing protein	join(43245..43471,43657..44165,44238..44615,44725..44842,44913..44973,45059..45202)	Acanthamoeba castellanii str. Neff	14920420
ACA1_197880	CDS	ACA1_197880	NW_004457538.1	45810	46764	R	encoded by transcript ACA1_197880A; uncharacterized protein	complement(join(45810..46052,46120..46521,46606..46764))	Acanthamoeba castellanii str. Neff	14920421
ACA1_197890	CDS	ACA1_197890	NW_004457538.1	47778	50154	D	encoded by transcript ACA1_197890A; uncharacterized protein	join(47778..47808,47915..48015,48132..48477,48555..48632,48719..49967,50013..50154)	Acanthamoeba castellanii str. Neff	14920422
ACA1_197900	CDS	ACA1_197900	NW_004457538.1	50593	53834	R	encoded by transcript ACA1_197900A; cyclin, Nterminal domain containing protein	complement(join(50593..50691,50807..50906,51005..51138,51266..51469,51584..51676,51782..51955,52143..52268,52644..52730,52846..52945,53045..53178,53428..53631,53742..53834))	Acanthamoeba castellanii str. Neff	14920423
ACA1_198110	CDS	ACA1_198110	NW_004457538.1	54248	54621	R	encoded by transcript ACA1_198110A; uncharacterized protein	complement(join(54248..54490,54514..54621))	Acanthamoeba castellanii str. Neff	14920424
ACA1_198120	CDS	ACA1_198120	NW_004457538.1	54782	57285	D	encoded by transcript ACA1_198120A; uncharacterized protein	join(54782..54991,55056..55112,55139..55267,55382..55534,55671..55829,55951..56070,56179..56313,56381..56510,56648..56795,56911..57060,57207..57285)	Acanthamoeba castellanii str. Neff	14920425
ACA1_198130	CDS	ACA1_198130	NW_004457538.1	57150	58050	R	encoded by transcript ACA1_198130A; uncharacterized protein	complement(join(57150..57514,57684..58050))	Acanthamoeba castellanii str. Neff	14920426
ACA1_198140	CDS	ACA1_198140	NW_004457538.1	58587	61355	R	encoded by transcript ACA1_198140A; tetratricopeptide repeat domain containing protein	complement(join(58587..58862,58939..59067,59136..59288,59367..59617,59730..60315,60511..60942,61023..61355))	Acanthamoeba castellanii str. Neff	14920427
ACA1_198250	CDS	ACA1_198250	NW_004457538.1	63450	66669	D	encoded by transcript ACA1_198250A; uncharacterized protein	join(63450..63656,63722..63778,63848..63931,64088..64198,64337..64495,64634..64753,64889..64990,65054..65183,65368..65515,65679..65828,65976..66075,66161..66357,66477..66669)	Acanthamoeba castellanii str. Neff	14920428
ACA1_198260	CDS	ACA1_198260	NW_004457538.1	66756	66962	R	encoded by transcript ACA1_198260A; CsbD family protein	complement(66756..66962)	Acanthamoeba castellanii str. Neff	14920429
ACA1_198270	CDS	ACA1_198270	NW_004457538.1	67583	68975	R	encoded by transcript ACA1_198270A; papain family cysteine protease subfamily protein	complement(join(67583..67689,67773..68008,68116..68287,68384..68975))	Acanthamoeba castellanii str. Neff	14920430
ACA1_198280	CDS	ACA1_198280	NW_004457538.1	69817	71405	R	encoded by transcript ACA1_198280A; uncharacterized protein	complement(join(69817..69939,70039..70227,70346..70416,70499..70586,70693..70812,70891..71086,71269..71405))	Acanthamoeba castellanii str. Neff	14920431
ACA1_198290	CDS	ACA1_198290	NW_004457538.1	71893	74076	D	encoded by transcript ACA1_198290A; uncharacterized protein	join(71893..72010,72168..72275,72367..72415,72492..73023,73109..73226,73314..73529,73634..74076)	Acanthamoeba castellanii str. Neff	14920432
ACA1_198300	CDS	ACA1_198300	NW_004457538.1	75082	76677	R	encoded by transcript ACA1_198300A; uncharacterized protein	complement(join(75082..75156,75254..75387,75505..75688,75779..75853,75959..76180,76288..76440,76624..76677))	Acanthamoeba castellanii str. Neff	14920433
ACA1_198310	CDS	ACA1_198310	NW_004457538.1	77036	77299	D	encoded by transcript ACA1_198310A; uncharacterized protein	join(77036..77058,77083..77299)	Acanthamoeba castellanii str. Neff	14920434
ACA1_198320	CDS	ACA1_198320	NW_004457538.1	77494	80873	R	encoded by transcript ACA1_198320A; uncharacterized protein	complement(join(77494..77661,77835..77930,78070..78200,78294..78420,78518..78631,78704..78755,78849..78967,79082..79204,79273..79409,79550..79784,79843..79909,79991..80241,80331..80438,80559..80639,80727..80873))	Acanthamoeba castellanii str. Neff	14920435
ACA1_198330	CDS	ACA1_198330	NW_004457538.1	81540	82294	D	encoded by transcript ACA1_198330A; Iglike, group 2, putative	join(81540..81902,81968..82294)	Acanthamoeba castellanii str. Neff	14920436
ACA1_198340	CDS	ACA1_198340	NW_004457538.1	82418	83804	R	encoded by transcript ACA1_198340A; papain family cysteine protease subfamily protein	complement(join(82418..82459,82542..82599,82726..82828,82929..82983,83065..83176,83275..83417,83512..83569,83644..83804))	Acanthamoeba castellanii str. Neff	14920437
ACA1_198350	CDS	ACA1_198350	NW_004457538.1	83987	87716	R	encoded by transcript ACA1_198350A; helicase associated domain containing protein	complement(join(83987..85099,85183..85751,85978..86055,86150..87716))	Acanthamoeba castellanii str. Neff	14920438
ACA1_198360	CDS	ACA1_198360	NW_004457538.1	89679	91679	R	encoded by transcript ACA1_198360A; epithiospecifier protein	complement(join(89679..89805,89894..90041,90093..90257,90392..90528,90817..90958,91135..91209,91346..91498,91595..>91679))	Acanthamoeba castellanii str. Neff	14920439
ACA1_198370	CDS	ACA1_198370	NW_004457538.1	91940	93623	R	encoded by transcript ACA1_198370A; DMT family transporter: UDPglucuronic acid/UDP-N-acetylgalactosamine, putative	complement(join(91940..91953,91986..92133,92231..92479,92571..92821,92908..93014,93098..93180,93269..93409,93531..93623))	Acanthamoeba castellanii str. Neff	14920440
ACA1_198380	CDS	ACA1_198380	NW_004457538.1	94048	100362	R	encoded by transcript ACA1_198380A; AMPbinding enzyme domain containing protein	complement(join(94048..95669,95776..95953,96055..96297,96393..96505,96605..96698,96795..96914,97028..97317,97435..97537,97667..97810,97902..98009,98086..98182,98260..98671,98842..98881,99017..99150,99241..99559,99772..99816,99878..100114,100273..100362))	Acanthamoeba castellanii str. Neff	14920441
ACA1_198390	CDS	ACA1_198390	NW_004457538.1	101173	102419	R	encoded by transcript ACA1_198390A; uncharacterized protein	complement(join(101173..101291,101400..101502,101602..101759,101837..101887,101960..102040,102107..102419))	Acanthamoeba castellanii str. Neff	14920442
ACA1_198400	CDS	ACA1_198400	NW_004457538.1	102729	104408	R	encoded by transcript ACA1_198400A; citrate transport family protein	complement(join(102729..103133,103228..103286,103360..103417,103545..103635,103766..103859,104038..104173,104245..104278,104353..104408))	Acanthamoeba castellanii str. Neff	14920443
ACA1_198410	CDS	ACA1_198410	NW_004457538.1	104934	106357	D	encoded by transcript ACA1_198410A; uncharacterized protein	join(104934..105215,105302..105627,105712..105806,105909..106357)	Acanthamoeba castellanii str. Neff	14920444
ACA1_198430	CDS	ACA1_198430	NW_004457538.1	109231	112330	D	encoded by transcript ACA1_198430A; RasGEF domain containing protein	join(109231..109318,109463..109595,109723..109785,109856..110681,110783..111214,111294..111686,111776..112330)	Acanthamoeba castellanii str. Neff	14920446
ACA1_198440	CDS	ACA1_198440	NW_004457538.1	112632	113031	R	encoded by transcript ACA1_198440A; uncharacterized protein	complement(join(112632..112706,112786..113031))	Acanthamoeba castellanii str. Neff	14920447
ACA1_198450	CDS	ACA1_198450	NW_004457538.1	113625	116904	R	encoded by transcript ACA1_198450A; uncharacterized protein	complement(join(113625..113753,113835..113988,114141..114685,114764..114913,114987..115095,115182..115393,115504..115676,115756..115853,115947..116069,116153..116244,116326..116397,116479..116904))	Acanthamoeba castellanii str. Neff	14920448
ACA1_198460	CDS	ACA1_198460	NW_004457538.1	117423	120032	D	encoded by transcript ACA1_198460A; uncharacterized protein	join(117423..117495,117566..117690,117765..117851,117946..118066,118159..118301,118441..118662,118722..118927,119008..119149,119257..119697,119802..120032)	Acanthamoeba castellanii str. Neff	14920449
ACA1_198470	CDS	ACA1_198470	NW_004457538.1	120707	122393	R	encoded by transcript ACA1_198470A; SAP domain containing protein	complement(join(120707..121796,121993..122393))	Acanthamoeba castellanii str. Neff	14920450
ACA1_198480	CDS	ACA1_198480	NW_004457538.1	122823	125748	D	encoded by transcript ACA1_198480A; transcription factor III family protein	join(122823..122946,123007..123077,123170..123277,123289..123355,123486..123548,123654..123724,123855..123971,124090..124168,124309..124468,124563..124661,124744..124887,124975..125119,125236..125748)	Acanthamoeba castellanii str. Neff	14920451
ACA1_198490	CDS	ACA1_198490	NW_004457538.1	125828	126662	R	encoded by transcript ACA1_198490A; RanBP1 domain containing protein	complement(join(125828..125904,125972..126106,126180..126331,126424..126662))	Acanthamoeba castellanii str. Neff	14920452
ACA1_198500	CDS	ACA1_198500	NW_004457538.1	126831	128398	D	encoded by transcript ACA1_198500A; Ubiquinone biosynthesis methyltransferase COQ5, putative	join(126831..127204,127294..127436,127541..127648,127733..127854,127972..128126,128281..128398)	Acanthamoeba castellanii str. Neff	14920453
ACA1_198510	CDS	ACA1_198510	NW_004457538.1	128965	130662	D	encoded by transcript ACA1_198510A; Transferase family protein	128965..130662	Acanthamoeba castellanii str. Neff	14920454
ACA1_198520	CDS	ACA1_198520	NW_004457538.1	131140	133029	R	encoded by transcript ACA1_198520A; carrier superfamily protein	complement(join(131140..131270,131390..131500,131616..131730,131832..132030,132169..132211,132330..132428,132779..132850,132951..133029))	Acanthamoeba castellanii str. Neff	14920455
ACA1_198530	CDS	ACA1_198530	NW_004457538.1	133266	134962	R	encoded by transcript ACA1_198530A; eTGF-beta receptor-interacting protein, putative	complement(join(133266..133386,133490..133746,133826..133936,134025..134158,134241..134374,134491..134575,134687..134840,134927..134962))	Acanthamoeba castellanii str. Neff	14920456
ACA1_198540	CDS	ACA1_198540	NW_004457538.1	135620	140891	D	encoded by transcript ACA1_198540A; RecF/RecN/SMC domain containing protein	join(135620..135743,135862..135967,136036..136172,136246..136451,136558..136680,136800..136928,137055..137314,137386..137560,137663..137766,137956..138130,138236..138346,138471..138551,138662..138895,139041..139163,139297..139488,139576..139791,139925..140050,140160..140254,140352..140506,140632..140891)	Acanthamoeba castellanii str. Neff	14920457
ACA1_198550	CDS	ACA1_198550	NW_004457538.1	141015	141977	R	encoded by transcript ACA1_198550A; uncharacterized protein	complement(join(141015..141192,141290..141548,141642..141784,141907..141977))	Acanthamoeba castellanii str. Neff	14920458
ACA1_198560	CDS	ACA1_198560	NW_004457538.1	143570	144884	R	encoded by transcript ACA1_198560A; cterminal domain small phosphatase, putative	complement(join(143570..143644,143738..143872,143949..144047,144147..144296,144405..144506,144657..144884))	Acanthamoeba castellanii str. Neff	14920459
ACA1_198570	CDS	ACA1_198570	NW_004457538.1	145306	146888	D	encoded by transcript ACA1_198570A; COP9 signalosome complex subunit 4, putative	join(145306..145697,145778..145931,146057..146488,146601..146688,146779..146888)	Acanthamoeba castellanii str. Neff	14920460
ACA1_198580	CDS	ACA1_198580	NW_004457538.1	147150	149386	D	encoded by transcript ACA1_198580A; transducin family protein	join(147150..147206,147289..147319,147541..147815,147910..148048,148177..148454,148546..148743,148851..149077,149149..149386)	Acanthamoeba castellanii str. Neff	14920461
ACA1_198690	CDS	ACA1_198690	NW_004457538.1	151550	153928	D	encoded by transcript ACA1_198690A; sestrinlike protein	join(151550..152050,152150..152285,152385..152422,152533..153630,153722..153928)	Acanthamoeba castellanii str. Neff	14920462
ACA1_198700	CDS	ACA1_198700	NW_004457538.1	154144	156357	R	encoded by transcript ACA1_198700A; ABC transporter, ATPbinding domain containing protein	complement(join(154144..154317,154379..154621,154710..154865,154914..155062,155149..155247,155327..155406,155540..155594,155714..155791,155949..156357))	Acanthamoeba castellanii str. Neff	14920463
ACA1_198710	CDS	ACA1_198710	NW_004457538.1	156801	158938	R	encoded by transcript ACA1_198710A; uncharacterized protein	complement(join(156801..157228,157329..157623,158702..158938))	Acanthamoeba castellanii str. Neff	14920464
ACA1_198820	CDS	ACA1_198820	NW_004457538.1	159689	163136	D	encoded by transcript ACA1_198820A; Sec34 family protein	join(159689..160353,160560..160719,160880..161002,161120..161280,161398..161488,161573..161770,161857..161916,162053..162216,162292..162361,162435..162612,162742..162878,163008..163136)	Acanthamoeba castellanii str. Neff	14920465
ACA1_198830	CDS	ACA1_198830	NW_004457538.1	163290	164355	R	encoded by transcript ACA1_198830A; vitamin k epoxide reductase family protein	complement(join(163290..163523,163606..164355))	Acanthamoeba castellanii str. Neff	14920466
ACA1_198840	CDS	ACA1_198840	NW_004457538.1	164503	166918	D	encoded by transcript ACA1_198840A; RNA recognition motif domain containing protein	join(164503..164635,164744..164840,164961..165171,165273..165459,165548..165613,165706..165813,165926..166067,166235..166362,166494..166918)	Acanthamoeba castellanii str. Neff	14920467
ACA1_198850	CDS	ACA1_198850	NW_004457538.1	168308	169218	R	encoded by transcript ACA1_198850A; von HippelLindau binding protein 1, putative	complement(join(168308..168505,168666..168758,168835..168946,169014..169087,169165..169218))	Acanthamoeba castellanii str. Neff	14920468
ACA1_198970	CDS	ACA1_198970	NW_004457538.1	177551	184226	R	encoded by transcript ACA1_198970A; viral Atype inclusion protein, putative	complement(join(177551..177643,177773..177938,178052..178146,178255..178436,178582..179001,179156..179299,179421..179514,179607..179905,180023..180207,180286..180389,180535..180606,180665..181198,181283..181478,181555..182000,182130..182166,182251..182337,182451..182539,182618..182745,182816..182888,183099..183257,183367..183489,183654..183740,183899..183978,184118..184226))	Acanthamoeba castellanii str. Neff	14920470
ACA1_198980	CDS	ACA1_198980	NW_004457538.1	184535	187816	R	encoded by transcript ACA1_198980A; RhoGAP domain containing protein	complement(join(184535..184726,184966..185037,185071..185129,185330..185354,185433..185558,185654..185706,185791..185896,186076..186150,186261..186356,186485..186527,186629..186716,186848..186987,187110..187231,187353..187390,187591..187816))	Acanthamoeba castellanii str. Neff	14920471
ACA1_198990	CDS	ACA1_198990	NW_004457538.1	188316	188852	D	encoded by transcript ACA1_198990A; uncharacterized protein	188316..188852	Acanthamoeba castellanii str. Neff	14920472
ACA1_199000	CDS	ACA1_199000	NW_004457538.1	189035	190434	R	encoded by transcript ACA1_199000A; uncharacterized protein	complement(join(189035..189196,189328..189380,189458..189542,189634..189735,189790..190434))	Acanthamoeba castellanii str. Neff	14920473
ACA1_199010	CDS	ACA1_199010	NW_004457538.1	190685	192864	D	encoded by transcript ACA1_199010A; JmjC domain containing protein 5 (Jumonji domain-containing protein 5), putative	join(190685..190788,190974..191070,191193..191264,191375..191514,191622..191646,191877..192086,192183..192296,192393..192510,192605..192864)	Acanthamoeba castellanii str. Neff	14920474
ACA1_199020	CDS	ACA1_199020	NW_004457538.1	192958	196823	R	encoded by transcript ACA1_199020A; calponin domain containing protein	complement(join(192958..193356,193484..193606,193743..193847,193999..194064,194186..194307,194406..194616,194706..194851,195047..195116,195272..195355,195436..195546,195694..195809,195899..196060,196154..196823))	Acanthamoeba castellanii str. Neff	14920475
ACA1_199030	CDS	ACA1_199030	NW_004457538.1	197532	201371	R	encoded by transcript ACA1_199030A; 1acylglycerophosphocholine O-acyltransferase 1, putative	complement(join(197532..197739,197818..198079,198215..198315,198417..198519,198643..198740,198847..198902,199037..199120,199216..199317,199443..199544,199843..199949,200048..200540,200642..200720,200812..201004,201095..201191,201264..201371))	Acanthamoeba castellanii str. Neff	14920476
ACA1_199040	CDS	ACA1_199040	NW_004457538.1	201723	205735	R	encoded by transcript ACA1_199040A; Pumiliofamily RNA binding repeat domain containing protein	complement(join(201723..202384,202497..202653,202801..202878,202944..203057,203169..203238,203346..203444,203544..203758,203840..203931,204057..204144,204259..204522,204694..204816,204931..205261,205333..205486,205636..205735))	Acanthamoeba castellanii str. Neff	14920477
ACA1_199050	CDS	ACA1_199050	NW_004457538.1	205884	208145	R	encoded by transcript ACA1_199050A; pentatricopeptide repeat domain containing protein	complement(join(205884..206369,206498..206563,206708..206902,206996..207169,207193..207507,207652..207699,207725..207801,207899..208145))	Acanthamoeba castellanii str. Neff	14920478
ACA1_199060	CDS	ACA1_199060	NW_004457538.1	209240	212039	R	encoded by transcript ACA1_199060A; HECTdomain (ubiquitin-transferase) domain containing protein	complement(join(209240..209342,209435..209526,209609..209724,209806..209902,210030..210254,210340..210404,210484..210594,210672..210841,210937..211020,211109..211253,211318..211402,211496..211594,211732..211825,211900..212039))	Acanthamoeba castellanii str. Neff	14920479
ACA1_199070	CDS	ACA1_199070	NW_004457538.1	212452	213048	R	encoded by transcript ACA1_199070A; uncharacterized protein	complement(join(212452..212967,213043..213048))	Acanthamoeba castellanii str. Neff	14920480
ACA1_199080	CDS	ACA1_199080	NW_004457538.1	213755	215681	R	encoded by transcript ACA1_199080A; PPR repeat-containing protein	complement(join(213755..214015,214361..214543,214569..214883,215014..215162,215263..215446,215673..215681))	Acanthamoeba castellanii str. Neff	14920481
ACA1_199290	CDS	ACA1_199290	NW_004457538.1	217069	219416	D	encoded by transcript ACA1_199290A; RhoGAP domain containing protein	join(217069..217090,217200..217280,217374..217421,217557..217714,217802..217921,218031..218844,218950..219416)	Acanthamoeba castellanii str. Neff	14920482
ACA1_199300	CDS	ACA1_199300	NW_004457538.1	219666	220856	R	encoded by transcript ACA1_199300A; TolAlike protein	complement(join(219666..220115,220228..220364,220481..220856))	Acanthamoeba castellanii str. Neff	14920483
ACA1_199310	CDS	ACA1_199310	NW_004457538.1	221180	222501	D	encoded by transcript ACA1_199310A; protein tolA, putative	join(221180..221561,221668..221888,221968..222501)	Acanthamoeba castellanii str. Neff	14920484
ACA1_199320	CDS	ACA1_199320	NW_004457538.1	223094	224452	D	encoded by transcript ACA1_199320A; electrontransfer-flavoprotein, beta polypeptide, putative	join(223094..223226,223366..223428,223526..223580,223738..223909,223985..224169,224305..224452)	Acanthamoeba castellanii str. Neff	14920485
ACA1_199330	CDS	ACA1_199330	NW_004457538.1	224652	226718	D	encoded by transcript ACA1_199330A; Bbox zinc finger domain containing protein	224652..226718	Acanthamoeba castellanii str. Neff	14920486
ACA1_199340	CDS	ACA1_199340	NW_004457538.1	226789	229003	R	encoded by transcript ACA1_199340A; BRCA1 C Terminus (BRCT) domain containing protein	complement(join(226789..226890,226986..227179,227259..227323,227408..227495,227599..228040,228112..228260,228360..228453,228525..228578,228677..228748,228842..229003))	Acanthamoeba castellanii str. Neff	14920487
ACA1_199350	CDS	ACA1_199350	NW_004457538.1	229517	230457	R	encoded by transcript ACA1_199350A; EF1 guanine nucleotide exchange domain containing protein	complement(join(229517..229603,229713..229878,230180..230457))	Acanthamoeba castellanii str. Neff	14920488
ACA1_199360	CDS	ACA1_199360	NW_004457538.1	231775	234273	R	encoded by transcript ACA1_199360A; uncharacterized protein	complement(join(231775..232364,232428..232550,232611..232754,232986..233031,233156..233232,233339..233410,233662..233823,233893..233970,234065..234165,234245..234273))	Acanthamoeba castellanii str. Neff	14920489
ACA1_199370	CDS	ACA1_199370	NW_004457538.1	234960	239710	R	encoded by transcript ACA1_199370A; uncharacterized protein	complement(join(234960..235100,235215..235474,235574..235905,236019..236090,236182..236295,236395..236578,236660..238382,238476..238856,238948..239146,239262..239353,239452..239578,239673..239710))	Acanthamoeba castellanii str. Neff	14920490
ACA1_199480	CDS	ACA1_199480	NW_004457538.1	241182	243227	R	encoded by transcript ACA1_199480A; type I phosphodiesterase/nucleotide pyrophosphatase	complement(join(241182..241273,241362..241431,241523..241644,241734..241816,241902..242002,242064..242187,242294..242429,242510..242552,242621..242717,242837..242974,243115..243227))	Acanthamoeba castellanii str. Neff	14920491
ACA1_199490	CDS	ACA1_199490	NW_004457538.1	243375	245266	D	encoded by transcript ACA1_199490A; ATPdependent RNA helicase DBP5, putative	join(243375..243507,243588..243916,243997..244102,244245..244425,244522..245121,245200..245266)	Acanthamoeba castellanii str. Neff	14920492
ACA1_199500	CDS	ACA1_199500	NW_004457538.1	246769	249675	D	encoded by transcript ACA1_199500A; 1acylglycerophosphocholine O-acyltransferase 1, putative	join(246769..246917,247064..247190,247294..247349,247481..247552,247647..247733,247817..247986,248060..248169,248279..248443,248514..248627,248735..248790,248908..249005,249141..249243,249332..249429,249542..249675)	Acanthamoeba castellanii str. Neff	14920493
ACA1_199520	CDS	ACA1_199520	NW_004457538.1	251869	255057	D	encoded by transcript ACA1_199520A; uncharacterized protein	join(<251869..251988,252186..252448,252549..252733,252845..252934,253123..253583,253707..253877,253998..254165,254253..254433,254520..254675,254764..254817,254951..255057)	Acanthamoeba castellanii str. Neff	14920495
ACA1_199530	CDS	ACA1_199530	NW_004457538.1	255331	256376	R	encoded by transcript ACA1_199530A; TolAlike protein	complement(join(255331..255875,255998..256376))	Acanthamoeba castellanii str. Neff	14920496
ACA1_199540	CDS	ACA1_199540	NW_004457538.1	256613	257859	D	encoded by transcript ACA1_199540A; TolAlike protein	join(256613..256796,256901..256965,256989..257094,257189..257859)	Acanthamoeba castellanii str. Neff	14920497
ACA1_199550	CDS	ACA1_199550	NW_004457538.1	257974	260698	R	encoded by transcript ACA1_199550A; DNA cross-link repair protein, putative	complement(join(257974..259032,259155..259241,259331..259504,259607..259678,259761..259847,259892..260016,260094..260208,260350..260465,260566..260698))	Acanthamoeba castellanii str. Neff	14920498
ACA1_199560	CDS	ACA1_199560	NW_004457538.1	260783	262085	R	encoded by transcript ACA1_199560A; uncharacterized protein	complement(join(260783..261406,261464..261564,261643..261797,261866..261989,262055..262085))	Acanthamoeba castellanii str. Neff	14920499
ACA1_199570	CDS	ACA1_199570	NW_004457538.1	262429	264076	R	encoded by transcript ACA1_199570A; uncharacterized protein	complement(join(262429..262535,262727..262808,262933..263050,263230..263886,263958..264076))	Acanthamoeba castellanii str. Neff	14920500
ACA1_199580	CDS	ACA1_199580	NW_004457538.1	264843	265478	R	encoded by transcript ACA1_199580A; uncharacterized protein	complement(join(264843..265338,265363..265478))	Acanthamoeba castellanii str. Neff	14920501
ACA1_199590	CDS	ACA1_199590	NW_004457538.1	266349	268081	R	encoded by transcript ACA1_199590A; uncharacterized protein	complement(join(266349..266948,266963..267214,267375..267502,267517..267537,267820..268081))	Acanthamoeba castellanii str. Neff	14920502
ACA1_199600	CDS	ACA1_199600	NW_004457538.1	270744	273051	D	encoded by transcript ACA1_199600A; PH domain containing protein	join(270744..271804,271893..272113,272240..272451,272562..272765,272878..273051)	Acanthamoeba castellanii str. Neff	14920503
ACA1_199610	CDS	ACA1_199610	NW_004457538.1	273053	274002	D	encoded by transcript ACA1_199610A; uncharacterized protein	join(273053..273166,273262..273416,273500..273580,273678..273797,273873..274002)	Acanthamoeba castellanii str. Neff	14920504
ACA1_199620	CDS	ACA1_199620	NW_004457538.1	274468	280743	D	encoded by transcript ACA1_199620A; phosphoinositide 3-kinase family, accessory domain (pik domain) domain containing protein	join(274468..275404,275582..275621,275775..276198,276333..276674,276762..276825,276941..277030,277077..277223,277439..277531,277645..277832,278023..278140,278345..278412,278647..278759,278851..278989,279175..279222,279262..279300,279440..279559,279653..279725,279832..279963,280091..280172,280266..280389,280474..280581,280666..280743)	Acanthamoeba castellanii str. Neff	14920505
ACA1_199630	CDS	ACA1_199630	NW_004457538.1	280803	282161	R	encoded by transcript ACA1_199630A; N(5'phosphoribosyl)anthranilate isomerase	complement(join(280803..280964,281072..281181,281352..281475,281553..281776,281857..281900,281968..282051,282139..282161))	Acanthamoeba castellanii str. Neff	14920506
ACA1_199640	CDS	ACA1_199640	NW_004457538.1	284578	287348	R	encoded by transcript ACA1_199640A; RFX DNAbinding domain containing protein	complement(join(284578..286220,286551..286627,286769..286810,286898..287020,287305..287348))	Acanthamoeba castellanii str. Neff	14920507
ACA1_199650	CDS	ACA1_199650	NW_004457538.1	288448	288888	D	encoded by transcript ACA1_199650A; uncharacterized protein	join(288448..288494,288738..288888)	Acanthamoeba castellanii str. Neff	14920508
ACA1_199660	CDS	ACA1_199660	NW_004457538.1	289239	290449	D	encoded by transcript ACA1_199660A; uncharacterized protein	join(289239..289243,289288..289357,289379..290449)	Acanthamoeba castellanii str. Neff	14920509
ACA1_199670	CDS	ACA1_199670	NW_004457538.1	290804	291721	D	encoded by transcript ACA1_199670A; uncharacterized protein	join(290804..290809,290930..291061,291294..291327,291540..291721)	Acanthamoeba castellanii str. Neff	14920510
ACA1_199680	CDS	ACA1_199680	NW_004457538.1	291802	296569	D	encoded by transcript ACA1_199680A; FYVE zinc finger domain containing protein	join(291802..291841,292080..292142,292250..292350,292491..292613,292767..292892,293032..293100,293236..293290,293460..293530,293579..293683,293701..293778,293974..294130,294165..294286,294512..294570,294686..294753,294972..295046,295268..295359,295463..295588,295733..295863,296002..296095,296194..296241,296324..296406,296530..296569)	Acanthamoeba castellanii str. Neff	14920511
ACA1_199700	CDS	ACA1_199700	NW_004457538.1	300844	302918	D	encoded by transcript ACA1_199700A; RFX DNAbinding domain containing protein	join(300844..300899,301049..301171,301409..301538,301770..302918)	Acanthamoeba castellanii str. Neff	14920513
ACA1_199710	CDS	ACA1_199710	NW_004457538.1	303406	307113	D	encoded by transcript ACA1_199710A; phosphate transporter, putative	join(303406..303474,303664..303769,303980..304132,304242..304346,304468..304704,304843..305022,305123..305228,305408..305487,305714..305922,306132..306264,306415..306526,306675..306768,306780..306906,306971..307113)	Acanthamoeba castellanii str. Neff	14920514
ACA1_199720	CDS	ACA1_199720	NW_004457538.1	307394	309985	R	encoded by transcript ACA1_199720A; pentatricopeptide repeat domain containing protein	complement(join(307394..307546,307664..307738,307811..307881,307974..308057,308152..308334,308458..308559,308694..308754,308926..308968,309080..309279,309376..309422,309595..309985))	Acanthamoeba castellanii str. Neff	14920515
ACA1_199730	CDS	ACA1_199730	NW_004457538.1	310160	312007	D	encoded by transcript ACA1_199730A; dihydrofolate reductase	join(310160..310437,310518..310617,310821..310943,311257..311386,311469..311549,311642..311709,311851..311873,311935..312007)	Acanthamoeba castellanii str. Neff	14920516
ACA1_199740	CDS	ACA1_199740	NW_004457538.1	313961	316477	R	encoded by transcript ACA1_199740A; CBS domain containing protein-related, putative	complement(join(313961..314122,314462..314547,314648..314761,314846..314933,315054..315232,315418..315524,315723..315782,315867..315969,316116..316188,316400..316477))	Acanthamoeba castellanii str. Neff	14920517
ACA1_199750	CDS	ACA1_199750	NW_004457538.1	317258	319167	R	encoded by transcript ACA1_199750A; uncharacterized protein	complement(join(317258..317340,317481..317593,317731..317842,318032..318093,318382..318462,318567..318652,318965..319007,319076..319167))	Acanthamoeba castellanii str. Neff	14920518
ACA1_199760	CDS	ACA1_199760	NW_004457538.1	320781	321493	R	encoded by transcript ACA1_199760A; uncharacterized protein	complement(join(320781..320804,320942..321033,321067..321376,321428..321493))	Acanthamoeba castellanii str. Neff	14920519
ACA1_199770	CDS	ACA1_199770	NW_004457538.1	322385	324228	D	encoded by transcript ACA1_199770A; uncharacterized protein	join(322385..322552,322701..322799,322868..322966,323493..323538,323600..323727,323819..323900,324197..324228)	Acanthamoeba castellanii str. Neff	14920520
ACA1_199780	CDS	ACA1_199780	NW_004457538.1	324683	327566	R	encoded by transcript ACA1_199780A; Hypothetical protein	complement(join(324683..324759,324830..324939,325076..325319,325619..325731,325883..325944,326144..326256,326359..326425,326545..326689,326912..326982,327111..327146,327309..327405,327475..>327566))	Acanthamoeba castellanii str. Neff	14920521
ACA1_199790	CDS	ACA1_199790	NW_004457538.1	329625	330925	D	encoded by transcript ACA1_199790A; uncharacterized protein	join(329625..329824,329950..330001,330020..330925)	Acanthamoeba castellanii str. Neff	14920522
ACA1_199810	CDS	ACA1_199810	NW_004457538.1	333853	337090	D	encoded by transcript ACA1_199810A; uncharacterized protein	join(333853..334046,334141..334174,334209..334318,334399..334594,334717..334901,335269..335394,335495..335678,335796..335948,336090..336373,336533..336608,336807..336902,337007..337090)	Acanthamoeba castellanii str. Neff	14920524
ACA1_199830	CDS	ACA1_199830	NW_004457538.1	343701	349313	R	encoded by transcript ACA1_199830A; glycine cleavage system Pprotein	complement(join(343701..343877,343978..344170,344298..344389,344499..344579,344722..344841,344937..345039,345138..345337,345555..345623,345764..345877,345988..346079,346199..346523,346719..346784,346884..347142,347252..347360,347476..347617,347754..347922,348002..348075,348176..348275,348426..348549,348708..348807,348981..349082,349224..349313))	Acanthamoeba castellanii str. Neff	14920526
ACA1_199940	CDS	ACA1_199940	NW_004457538.1	350479	352555	D	encoded by transcript ACA1_199940A; uncharacterized protein	join(350479..350491,351000..351118,351274..351334,351427..351653,351743..351933,352009..352115,352222..352292,352415..352555)	Acanthamoeba castellanii str. Neff	14920527
ACA1_199950	CDS	ACA1_199950	NW_004457538.1	352818	354403	R	encoded by transcript ACA1_199950A; SRFtype transcription factor (DNA-binding and dimerization domain) domain containing protein	complement(join(352818..353453,353532..354239,354350..354403))	Acanthamoeba castellanii str. Neff	14920528
ACA1_199960	CDS	ACA1_199960	NW_004457538.1	355807	359517	R	encoded by transcript ACA1_199960A; regulator of chromosome condensation (RCC1) repeat domain containing protein	complement(join(355807..356203,356353..356662,356740..356983,357057..357415,357495..357549,357626..357849,357969..358221,358431..358525,358612..358842,358948..359318,359438..>359517))	Acanthamoeba castellanii str. Neff	14920529
ACA1_199970	CDS	ACA1_199970	NW_004457538.1	360449	362984	R	encoded by transcript ACA1_199970A; glycoside hydrolase family protein	complement(join(360449..360514,360609..360788,360880..361063,361140..361240,361357..361595,361667..361865,361945..362016,362123..362195,362302..362444,362592..362717,362841..362984))	Acanthamoeba castellanii str. Neff	14920530
ACA1_199980	CDS	ACA1_199980	NW_004457538.1	363269	363920	D	encoded by transcript ACA1_199980A; uncharacterized protein	join(363269..363302,363484..363920)	Acanthamoeba castellanii str. Neff	14920531
ACA1_199990	CDS	ACA1_199990	NW_004457538.1	364060	365230	D	encoded by transcript ACA1_199990A; guanine nucleotide-binding protein beta subunit, putative	join(364060..364168,364272..364412,364515..365230)	Acanthamoeba castellanii str. Neff	14920532
ACA1_200000	CDS	ACA1_200000	NW_004457538.1	365390	367230	R	encoded by transcript ACA1_200000A; LAO/AO transport system ATPase	complement(join(365390..365602,365701..365781,365871..366050,366164..366300,366438..366558,366633..366695,366802..367043,367155..367230))	Acanthamoeba castellanii str. Neff	14920533
ACA1_200010	CDS	ACA1_200010	NW_004457538.1	367539	370537	D	encoded by transcript ACA1_200010A; protein kinase domain containing protein	join(367539..367930,368029..368152,368213..368219,368287..368354,368533..368607,368710..368772,368900..369082,369198..369396,369484..369565,369638..369647,369732..369791,369904..370095,370202..370537)	Acanthamoeba castellanii str. Neff	14920534
ACA1_200020	CDS	ACA1_200020	NW_004457538.1	371194	373466	D	encoded by transcript ACA1_200020A; protein kinase domain containing protein	join(371194..371356,371404..371557,371694..371913,372008..372095,372180..372449,372556..372725,372795..373085,373170..373295,373311..373466)	Acanthamoeba castellanii str. Neff	14920535
ACA1_200030	CDS	ACA1_200030	NW_004457538.1	373672	376788	D	encoded by transcript ACA1_200030A; uncharacterized protein	join(373672..373705,373788..374116,374239..374396,374503..374729,374796..375040,375131..375272,375318..375623,375914..376008,376105..376227,376297..376359,376459..376788)	Acanthamoeba castellanii str. Neff	14920536
ACA1_200050	CDS	ACA1_200050	NW_004457538.1	378809	384379	R	encoded by transcript ACA1_200050A; Poly(ADPribose) polymerase catalytic domain containing protein	complement(join(378809..378877,378978..379115,379219..379377,379486..379529,379663..379849,379924..380006,380112..380239,380373..380473,380594..380710,380826..380943,381065..381120,381298..381450,381512..381576,381690..381969,382056..382171,382233..382368,382487..382784,382883..383013,383153..383235,383321..383807,383893..383990,384080..384306,384357..384379))	Acanthamoeba castellanii str. Neff	14920538
ACA1_200060	CDS	ACA1_200060	NW_004457538.1	384849	385505	R	encoded by transcript ACA1_200060A; uncharacterized protein	complement(384849..385505)	Acanthamoeba castellanii str. Neff	14920539
ACA1_200070	CDS	ACA1_200070	NW_004457538.1	385709	387257	D	encoded by transcript ACA1_200070A; tetratricopeptide repeat domain containing protein	join(385709..385942,386019..386154,386241..386317,386396..386477,386589..386684,386780..386863,386965..387146,387204..387257)	Acanthamoeba castellanii str. Neff	14920540
ACA1_200080	CDS	ACA1_200080	NW_004457538.1	387426	388919	R	encoded by transcript ACA1_200080A; uncharacterized protein	complement(387426..388919)	Acanthamoeba castellanii str. Neff	14920541
ACA1_200090	CDS	ACA1_200090	NW_004457538.1	389345	389842	R	encoded by transcript ACA1_200090A; flavin reductaselike, FMN-binding, putative	complement(389345..389842)	Acanthamoeba castellanii str. Neff	14920542
ACA1_200100	CDS	ACA1_200100	NW_004457538.1	390159	391169	R	encoded by transcript ACA1_200100A; uncharacterized protein	complement(join(390159..390262,390354..390425,390540..390869,391004..391169))	Acanthamoeba castellanii str. Neff	14920543
ACA1_200110	CDS	ACA1_200110	NW_004457538.1	391403	394688	D	encoded by transcript ACA1_200110A; Prokumamolisin, activation domain containing protein	join(391403..391648,391727..391769,391848..392046,392150..392250,392356..392492,392656..392845,392956..393057,393152..393218,393347..393478,393551..393640,393761..393826,393848..393893,393990..394045,394152..394258,394424..394504,394594..394688)	Acanthamoeba castellanii str. Neff	14920544
ACA1_200120	CDS	ACA1_200120	NW_004457538.1	394836	399286	R	encoded by transcript ACA1_200120A; RhoGAP domain containing protein	complement(join(394836..394932,395020..395177,395278..395362,395456..395542,395582..395663,395806..395890,395978..396043,396142..396265,396362..396465,396544..396591,396827..396970,397051..397132,397282..397677,397785..397848,397971..398127,398480..398913,399256..399286))	Acanthamoeba castellanii str. Neff	14920545
ACA1_200130	CDS	ACA1_200130	NW_004457538.1	399688	400739	D	encoded by transcript ACA1_200130A; SH3 domain containing protein	join(399688..399873,400115..400186,400303..400419,400518..400739)	Acanthamoeba castellanii str. Neff	14920546
ACA1_200140	CDS	ACA1_200140	NW_004457538.1	400963	404755	D	encoded by transcript ACA1_200140A; glutaminase	join(400963..401211,401300..401393,401473..401824,401904..401958,402081..402158,402237..402446,402567..402775,402863..402983,403061..403517,403691..403898,404039..404135,404217..404287,404395..404534,404643..404755)	Acanthamoeba castellanii str. Neff	14920547
ACA1_200150	CDS	ACA1_200150	NW_004457538.1	405029	405832	R	encoded by transcript ACA1_200150A; uncharacterized protein	complement(join(405029..405095,405222..405303,405445..405615,405718..405832))	Acanthamoeba castellanii str. Neff	14920548
ACA1_200160	CDS	ACA1_200160	NW_004457538.1	406156	409930	D	encoded by transcript ACA1_200160A; DEAD/DEAH box helicase domain containing protein	join(406156..406177,406303..406754,406909..406999,407111..407577,407674..408106,408198..408376,408452..408826,408925..409010,409129..409339,409430..409519,409616..409930)	Acanthamoeba castellanii str. Neff	14920549
ACA1_200170	CDS	ACA1_200170	NW_004457538.1	410128	410546	R	encoded by transcript ACA1_200170A; uncharacterized protein	complement(join(410128..410150,410224..410295,410408..410546))	Acanthamoeba castellanii str. Neff	14920550
ACA1_200180	CDS	ACA1_200180	NW_004457538.1	411211	411548	D	encoded by transcript ACA1_200180A; uncharacterized protein	join(411211..411244,411343..411548)	Acanthamoeba castellanii str. Neff	14920551
ACA1_200190	CDS	ACA1_200190	NW_004457538.1	411865	412527	R	encoded by transcript ACA1_200190A; domain found in if2b/if5 domain containing protein	complement(411865..412527)	Acanthamoeba castellanii str. Neff	14920552
ACA1_200200	CDS	ACA1_200200	NW_004457538.1	412731	414199	R	encoded by transcript ACA1_200200A; aspartyl/asparaginyl betahydroxylase	complement(join(412731..412749,412841..412947,413083..413201,413325..413405,413513..413621,413735..413839,413927..414199))	Acanthamoeba castellanii str. Neff	14920553
ACA1_200210	CDS	ACA1_200210	NW_004457538.1	414301	416080	D	encoded by transcript ACA1_200210A; uncharacterized protein	join(414301..414446,414511..414580,414666..414767,414854..414913,415000..415076,415178..415280,415369..415431,415560..415686,415791..415922,416046..416080)	Acanthamoeba castellanii str. Neff	14920554
ACA1_200220	CDS	ACA1_200220	NW_004457538.1	416443	418140	D	encoded by transcript ACA1_200220A; fructose-1,6-bisphosphatase, putative	join(416443..416526,416613..416731,416822..416908,416994..417100,417164..417249,417512..417771,417855..418140)	Acanthamoeba castellanii str. Neff	14920555
ACA1_200230	CDS	ACA1_200230	NW_004457538.1	418286	418722	R	encoded by transcript ACA1_200230A; uncharacterized protein	complement(join(418286..418350,418430..418595,418693..418722))	Acanthamoeba castellanii str. Neff	14920556
ACA1_200240	CDS	ACA1_200240	NW_004457538.1	418801	424690	R	encoded by transcript ACA1_200240A; phospholipase D active site domain containing protein	complement(join(418801..418890,418977..419031,419112..419174,419280..419408,419548..419661,419756..419936,420066..420288,420430..420483,420569..420676,420765..420857,420989..421233,421333..421477,421664..421848,421959..422004,422093..422228,422301..422493,422615..422752,422805..422931,423041..423153,423298..423406,423506..423590,423722..423979,424070..424400,424498..424690))	Acanthamoeba castellanii str. Neff	14920557
ACA1_200250	CDS	ACA1_200250	NW_004457538.1	425056	427540	R	encoded by transcript ACA1_200250A; carrier superfamily protein	complement(join(425056..425121,425221..425366,425468..425668,425738..425935,426009..426074,426157..426231,426368..426437,426559..426696,427009..427113,427217..427245,427341..427370,427531..427540))	Acanthamoeba castellanii str. Neff	14920558
ACA1_200360	CDS	ACA1_200360	NW_004457538.1	428064	429220	D	encoded by transcript ACA1_200360A; leucine rich repeat domain containing protein	join(<428064..428430,428590..428775,428908..428999,429164..429220)	Acanthamoeba castellanii str. Neff	14920559
ACA1_200370	CDS	ACA1_200370	NW_004457538.1	429387	431750	D	encoded by transcript ACA1_200370A; Fbox domain containing protein	join(429387..429944,430088..430270,430395..430659,430784..430990,431108..431135,431215..431258,431275..431750)	Acanthamoeba castellanii str. Neff	14920560
ACA1_200380	CDS	ACA1_200380	NW_004457538.1	431828	435234	R	encoded by transcript ACA1_200380A; glycosyl hydrolases family 2, TIM barrel domain containing protein	complement(join(431828..432015,432106..432192,432307..432369,432388..432545,432659..433033,433102..433184,433267..433671,433771..433883,433987..434057,434302..434381,434468..434552,434919..435018,435162..435234))	Acanthamoeba castellanii str. Neff	14920561
ACA1_200390	CDS	ACA1_200390	NW_004457538.1	435339	436040	R	encoded by transcript ACA1_200390A; LacZ, putative	complement(435339..436040)	Acanthamoeba castellanii str. Neff	14920562
ACA1_200400	CDS	ACA1_200400	NW_004457538.1	436220	437782	R	encoded by transcript ACA1_200400A; glycoside hydrolase family protein	complement(join(436220..436327,436538..436630,436710..436826,436908..436988,437107..437374,437500..437605,437740..437782))	Acanthamoeba castellanii str. Neff	14920563
ACA1_200410	CDS	ACA1_200410	NW_004457538.1	437881	440035	D	encoded by transcript ACA1_200410A; tetratricopeptide repeat domain containing protein	join(437881..437911,437926..437945,437962..438046,438253..438476,438593..438692,438784..438881,439046..439198,439289..439430,439541..439681,439794..439892,440010..440035)	Acanthamoeba castellanii str. Neff	14920564
ACA1_200420	CDS	ACA1_200420	NW_004457538.1	440102	441590	R	encoded by transcript ACA1_200420A; Autophagy-related protein 27 protein	complement(join(440102..440309,440412..440581,440680..440787,440897..440964,441140..441194,441286..441339,441450..441590))	Acanthamoeba castellanii str. Neff	14920565
ACA1_200430	CDS	ACA1_200430	NW_004457538.1	442058	443491	R	encoded by transcript ACA1_200430A; elongation factor 1-alpha, putative	complement(join(442058..442414,442662..443122,443179..443491))	Acanthamoeba castellanii str. Neff	14920566
ACA1_200540	CDS	ACA1_200540	NW_004457538.1	444123	445052	D	encoded by transcript ACA1_200540A; uncharacterized protein	join(444123..444785,444957..445052)	Acanthamoeba castellanii str. Neff	14920567
ACA1_200550	CDS	ACA1_200550	NW_004457538.1	445337	447056	R	encoded by transcript ACA1_200550A; protein kinase domain containing protein	complement(join(445337..445431,445585..445747,445854..446000,446118..446203,446334..446427,446553..446876,446985..447056))	Acanthamoeba castellanii str. Neff	14920568
ACA1_200560	CDS	ACA1_200560	NW_004457538.1	447923	449772	R	encoded by transcript ACA1_200560A; Calciumbinding atopy-related autoantigen 1, putative	complement(join(447923..448013,448089..448142,448230..448311,448417..448510,448603..448706,448791..449033,449122..449232,449332..449449,449563..449772))	Acanthamoeba castellanii str. Neff	14920569
ACA1_200570	CDS	ACA1_200570	NW_004457538.1	450572	452872	D	encoded by transcript ACA1_200570A; uncharacterized protein	join(450572..450773,450933..451013,451143..451247,451286..451383,451491..451698,451813..451891,452000..452052,452160..452232,452551..452656,452750..452872)	Acanthamoeba castellanii str. Neff	14920570
ACA1_200680	CDS	ACA1_200680	NW_004457538.1	453699	454272	D	encoded by transcript ACA1_200680A; uncharacterized protein	join(453699..453818,453944..454059,454153..454222,454237..454272)	Acanthamoeba castellanii str. Neff	14920571
ACA1_200690	CDS	ACA1_200690	NW_004457538.1	455405	457290	R	encoded by transcript ACA1_200690A; calcium binding atopyrelated autoantigen 1, putative	complement(join(455405..455495,455571..455624,455712..455793,455899..455992,456085..456188,456295..456537,456625..456735,456841..456958,457081..457290))	Acanthamoeba castellanii str. Neff	14920572
ACA1_200900	CDS	ACA1_200900	NW_004457538.1	458834	460681	D	encoded by transcript ACA1_200900A; abhydrolase domain containing protein 3, putative	join(458834..459035,459157..459237,459367..459471,459522..459618,460365..460470,460559..460681)	Acanthamoeba castellanii str. Neff	14920573
ACA1_201010	CDS	ACA1_201010	NW_004457538.1	461574	462887	D	encoded by transcript ACA1_201010A; 2oxoglutarate and iron-dependent oxygenase domain containing protein 2, putative	join(461574..461693,461766..461935,462024..462093,462175..462273,462344..462387,462452..462546,462621..462694,462777..462887)	Acanthamoeba castellanii str. Neff	14920574
ACA1_201020	CDS	ACA1_201020	NW_004457538.1	462997	465919	D	encoded by transcript ACA1_201020A; uncharacterized protein	join(462997..463240,463304..463417,463498..463874,464001..464391,464483..464616,464709..464847,465020..465186,465308..465477,465607..465919)	Acanthamoeba castellanii str. Neff	14920575
ACA1_201030	CDS	ACA1_201030	NW_004457538.1	466208	468100	R	encoded by transcript ACA1_201030A; Ras subfamily protein	complement(join(466208..466234,466284..466450,466626..466776,466906..466956,467020..467069,467206..467280,467414..467487,467589..467735,467827..467941,468055..468100))	Acanthamoeba castellanii str. Neff	14920576
ACA1_201040	CDS	ACA1_201040	NW_004457538.1	469472	471302	D	encoded by transcript ACA1_201040A; uncharacterized protein	join(469472..469480,469631..470679,470753..471302)	Acanthamoeba castellanii str. Neff	14920577
ACA1_201050	CDS	ACA1_201050	NW_004457538.1	472361	472975	R	encoded by transcript ACA1_201050A; uncharacterized protein	complement(join(472361..472435,472565..472975))	Acanthamoeba castellanii str. Neff	14920578
ACA1_201060	CDS	ACA1_201060	NW_004457538.1	473252	474322	D	encoded by transcript ACA1_201060A; uncharacterized protein	join(473252..473509,473547..473725,473800..474322)	Acanthamoeba castellanii str. Neff	14920579
ACA1_201070	CDS	ACA1_201070	NW_004457538.1	476204	476629	R	encoded by transcript ACA1_201070A; uncharacterized protein	complement(476204..476629)	Acanthamoeba castellanii str. Neff	14920580
ACA1_201080	CDS	ACA1_201080	NW_004457538.1	477522	477947	R	encoded by transcript ACA1_201080A; uncharacterized protein	complement(477522..477947)	Acanthamoeba castellanii str. Neff	14920581
ACA1_201090	CDS	ACA1_201090	NW_004457538.1	479397	479822	R	encoded by transcript ACA1_201090A; uncharacterized protein	complement(479397..479822)	Acanthamoeba castellanii str. Neff	14920582
ACA1_201100	CDS	ACA1_201100	NW_004457538.1	480096	480676	R	encoded by transcript ACA1_201100A; uncharacterized protein	complement(join(<480096..480387,480411..480676))	Acanthamoeba castellanii str. Neff	14920583
ACA1_201110	CDS	ACA1_201110	NW_004457538.1	481776	482510	R	encoded by transcript ACA1_201110A; uncharacterized protein	complement(join(<481776..481835,482055..482129,482400..482510))	Acanthamoeba castellanii str. Neff	14920584
ACA1_201120	CDS	ACA1_201120	NW_004457538.1	483763	484082	R	encoded by transcript ACA1_201120A; uncharacterized protein	complement(join(483763..483948,484026..484082))	Acanthamoeba castellanii str. Neff	14920585
ACA1_201130	CDS	ACA1_201130	NW_004457538.1	484682	488008	D	encoded by transcript ACA1_201130A; uncharacterized protein	join(484682..484734,484859..485624,485711..485854,485936..486020,486196..486280,486361..486444,486529..486653,486744..486860,487226..487728,487844..488008)	Acanthamoeba castellanii str. Neff	14920586
ACA1_201140	CDS	ACA1_201140	NW_004457538.1	489798	490751	R	encoded by transcript ACA1_201140A; uncharacterized protein	complement(join(489798..489861,489967..490151,490227..490328,490443..490751))	Acanthamoeba castellanii str. Neff	14920587
ACA1_201160	CDS	ACA1_201160	NW_004457538.1	492715	497030	R	encoded by transcript ACA1_201160A; RasGEF domain containing protein	complement(join(492715..492777,492867..492964,493085..493183,493325..493453,493538..493597,493690..493863,493985..494075,494184..494375,494481..494652,494741..494805,494900..494971,495089..495170,495254..495353,495619..495733,495825..495884,496005..496072,496289..497030))	Acanthamoeba castellanii str. Neff	14920588
ACA1_201170	CDS	ACA1_201170	NW_004457538.1	498230	499601	D	encoded by transcript ACA1_201170A; RWD domain containing protein	join(498230..498391,498571..498888,499011..499186,499298..499460,499569..499601)	Acanthamoeba castellanii str. Neff	14920590
ACA1_201180	CDS	ACA1_201180	NW_004457538.1	499840	501601	R	encoded by transcript ACA1_201180A; uncharacterized protein	complement(join(499840..500009,500088..500184,500269..500377,500480..500581,500703..500823,500954..501021,501311..501386,501466..501601))	Acanthamoeba castellanii str. Neff	14920591
ACA1_201190	CDS	ACA1_201190	NW_004457538.1	502097	503365	D	encoded by transcript ACA1_201190A; endonuclease/exonuclease/phosphatase family protein	join(502097..502196,502289..502350,502417..502456,502547..502617,502778..502930,503081..503365)	Acanthamoeba castellanii str. Neff	14920592
ACA1_201200	CDS	ACA1_201200	NW_004457538.1	503471	505806	D	encoded by transcript ACA1_201200A; Ras subfamily protein	join(503471..503623,503707..503819,503899..503978,504037..504188,504245..504448,504523..504676,504747..504845,504941..505066,505172..505354,505490..505806)	Acanthamoeba castellanii str. Neff	14920593
ACA1_201210	CDS	ACA1_201210	NW_004457538.1	506501	508435	R	encoded by transcript ACA1_201210A; rhamnosebinding lectin (SAL), putative	complement(join(506501..506878,506960..507352,507432..507779,507889..508218,508313..508435))	Acanthamoeba castellanii str. Neff	14920594
ACA1_201220	CDS	ACA1_201220	NW_004457538.1	509757	511337	D	encoded by transcript ACA1_201220A; uncharacterized protein	join(509757..509977,510031..510646,510975..511077,511222..511337)	Acanthamoeba castellanii str. Neff	14920595
ACA1_201330	CDS	ACA1_201330	NW_004457538.1	512146	512977	D	encoded by transcript ACA1_201330A; uncharacterized protein	join(512146..512279,512355..512760,512834..512977)	Acanthamoeba castellanii str. Neff	14920596
ACA1_201340	CDS	ACA1_201340	NW_004457538.1	513771	528630	R	encoded by transcript ACA1_201340A; dual specificity phosphatase, catalytic domain containing protein	complement(join(513771..513968,514048..514332,514406..514543,514658..514755,514855..515082,515231..515382,515478..515619,515723..515804,515895..515965,516056..516188,516277..516602,516696..516783,516867..516953,517015..517079,517160..517239,517362..517515,517599..517688,517758..517830,517923..518029,518145..518386,518564..518796,518860..519498,519591..519992,520071..520232,520310..520588,520669..520865,520936..521181,521298..521560,521681..521909,521990..522260,522394..522528,522650..522829,522955..523308,523391..523484,523591..523706,523776..523841,523917..524100,524399..524616,524706..524852,524965..525100,525182..525287,525396..525780,525911..526027,526115..526388,526553..526689,526779..526831,526902..526968,527049..527218,527373..527481,527575..527684,527786..527865,527965..528087,528186..528267,528522..528630))	Acanthamoeba castellanii str. Neff	14920597
ACA1_201350	CDS	ACA1_201350	NW_004457538.1	528936	529598	R	encoded by transcript ACA1_201350A; glutathione transferase family protein	complement(528936..529598)	Acanthamoeba castellanii str. Neff	14920598
ACA1_201360	CDS	ACA1_201360	NW_004457538.1	529830	531891	R	encoded by transcript ACA1_201360A; regulator of chromosome condensation (RCC1) repeat domain containing protein	complement(join(529830..529944,530194..530272,530425..530555,530591..530840,530911..531001,531081..531245,531352..531445,531761..531891))	Acanthamoeba castellanii str. Neff	14920599
ACA1_201370	CDS	ACA1_201370	NW_004457538.1	532125	536713	D	encoded by transcript ACA1_201370A; allantoicase repeat domain containing protein	join(532125..532451,532582..533064,533227..533613,533687..533857,533929..534065,534149..534341,534422..534499,534585..534925,535007..535095,535230..535359,535485..535622,535724..535860,535941..536030,536109..536472,536548..536713)	Acanthamoeba castellanii str. Neff	14920600
ACA1_201380	CDS	ACA1_201380	NW_004457538.1	538047	538914	R	encoded by transcript ACA1_201380A; uncharacterized protein	complement(join(538047..538280,538363..538914))	Acanthamoeba castellanii str. Neff	14920601
ACA1_201390	CDS	ACA1_201390	NW_004457538.1	539661	542279	R	encoded by transcript ACA1_201390A; transmembrane 9 superfamily protein member 4, putative	complement(join(539661..539728,539815..539986,540070..540405,540539..540745,540836..541291,541369..541539,541641..541740,541804..541913,542010..542279))	Acanthamoeba castellanii str. Neff	14920602
ACA1_201400	CDS	ACA1_201400	NW_004457538.1	542964	544410	D	encoded by transcript ACA1_201400A; CBS domain containing protein	join(542964..543101,543194..543440,543519..543628,543714..543939,544034..544206,544291..544410)	Acanthamoeba castellanii str. Neff	14920603
ACA1_201410	CDS	ACA1_201410	NW_004457538.1	546592	547463	R	encoded by transcript ACA1_201410A; uncharacterized protein	complement(join(546592..546759,546786..546952,547010..547178,547252..547340,547424..547463))	Acanthamoeba castellanii str. Neff	14920604
ACA1_201420	CDS	ACA1_201420	NW_004457538.1	547696	548314	D	encoded by transcript ACA1_201420A; uncharacterized protein	join(547696..547720,547830..548314)	Acanthamoeba castellanii str. Neff	14920605
ACA1_201430	CDS	ACA1_201430	NW_004457538.1	549572	550239	D	encoded by transcript ACA1_201430A; uncharacterized protein	join(549572..549669,549726..550239)	Acanthamoeba castellanii str. Neff	14920606
ACA1_201440	CDS	ACA1_201440	NW_004457538.1	551696	553226	R	encoded by transcript ACA1_201440A; BNR/Aspbox repeat domain containing protein	complement(join(551696..552402,552472..552628,552846..553226))	Acanthamoeba castellanii str. Neff	14920607
ACA1_201450	CDS	ACA1_201450	NW_004457538.1	553549	554547	D	encoded by transcript ACA1_201450A; ADPribosylation factor, putative	join(553549..553615,553692..553769,553886..553995,554103..554229,554293..554397,554489..554547)	Acanthamoeba castellanii str. Neff	14920608
ACA1_201460	CDS	ACA1_201460	NW_004457538.1	554724	558074	R	encoded by transcript ACA1_201460A; lipase	complement(join(554724..554864,554974..555180,555261..555386,555462..555598,555682..555755,555854..556173,556216..556756,556861..556991,557076..557100,557208..557302,557385..557530,557671..557798,557929..558074))	Acanthamoeba castellanii str. Neff	14920609
ACA1_201470	CDS	ACA1_201470	NW_004457538.1	558767	560154	R	encoded by transcript ACA1_201470A; Rasrelated protein Rab-2B, putative	complement(join(558767..558877,558951..559037,559126..559304,559405..559482,559573..559589,559681..559727,559834..559854,559935..560005,560115..560154))	Acanthamoeba castellanii str. Neff	14920610
ACA1_201480	CDS	ACA1_201480	NW_004457538.1	560710	562160	D	encoded by transcript ACA1_201480A; alcohol dehydrogenase	join(560710..560737,560808..561034,561100..561472,561543..561811,561882..562160)	Acanthamoeba castellanii str. Neff	14920611
ACA1_201490	CDS	ACA1_201490	NW_004457538.1	563823	572622	D	encoded by transcript ACA1_201490A; uncharacterized protein	join(563823..563840,563951..564032,564119..564173,564275..564436,564527..564577,564678..564749,564872..564954,565035..565105,565203..565305,565400..565569,565702..565770,565869..565939,566050..566108,566193..566330,566424..566455,566766..566922,567089..567164,567233..567321,567332..567491,567509..567615,567698..567909,568093..568292,568423..568560,568841..568980,569098..569450,569558..569665,569744..570145,570222..570314,570479..570715,570785..570859,570955..571043,571116..571205,571287..571369,571475..571523,571589..571673,571739..571852,571962..572037,572134..572184,572363..572622)	Acanthamoeba castellanii str. Neff	14920612
ACA1_201500	CDS	ACA1_201500	NW_004457538.1	573242	575132	D	encoded by transcript ACA1_201500A; endonuclease/exonuclease/phosphatase family protein	join(573242..573247,573310..573617,573732..573793,573916..574001,574093..574165,574254..574370,574459..574587,574666..575132)	Acanthamoeba castellanii str. Neff	14920613
ACA1_201510	CDS	ACA1_201510	NW_004457538.1	575252	578365	D	encoded by transcript ACA1_201510A; ubiquitin fusion degradation protein, putative	join(575252..575344,575437..575481,575553..575627,575723..575885,575993..576113,576178..576248,576350..576475,576582..576658,576748..576854,576955..577042,577155..577414,577495..577546,577643..577726,577802..577863,577924..577999,578091..578151,578256..578365)	Acanthamoeba castellanii str. Neff	14920614
ACA1_201520	CDS	ACA1_201520	NW_004457538.1	578615	579060	R	encoded by transcript ACA1_201520A; uncharacterized protein	complement(join(578615..578701,578826..578918,579013..579060))	Acanthamoeba castellanii str. Neff	14920615
ACA1_201530	CDS	ACA1_201530	NW_004457538.1	579444	582588	D	encoded by transcript ACA1_201530A; polysaccharide lyase family 8, supersandwich subfamily protein	join(579444..579586,579671..579717,579783..579835,579976..580123,580230..580516,580640..580704,580837..581079,581177..581366,581446..582588)	Acanthamoeba castellanii str. Neff	14920616
ACA1_201540	CDS	ACA1_201540	NW_004457538.1	582630	584521	R	encoded by transcript ACA1_201540A; WD repeatcontaining protein	complement(join(582630..582842,582984..583132,583236..583374,583539..583654,583756..583953,584033..584072,584180..584521))	Acanthamoeba castellanii str. Neff	14920617
ACA1_201550	CDS	ACA1_201550	NW_004457538.1	585308	585949	D	encoded by transcript ACA1_201550A; Ras subfamily protein	join(585308..585427,585464..585949)	Acanthamoeba castellanii str. Neff	14920618
ACA1_201560	CDS	ACA1_201560	NW_004457538.1	586451	591130	R	encoded by transcript ACA1_201560A; ATPase/histidine kinase/DNA gyrase B/HSP90 domain containing protein	complement(join(586451..586592,586692..586822,586884..586950,587047..587241,587349..587518,587618..587648,587703..587776,587853..588552,588664..588751,588829..588921,589001..589104,589197..589342,589408..589532,589615..589723,589800..589884,590003..590452,590534..590678,590791..590955,591040..591130))	Acanthamoeba castellanii str. Neff	14920619
ACA1_201570	CDS	ACA1_201570	NW_004457538.1	591322	592679	R	encoded by transcript ACA1_201570A; uncharacterized protein	complement(join(591322..591340,591375..591447,591518..591695,591788..591942,592031..592146,592360..592679))	Acanthamoeba castellanii str. Neff	14920620
ACA1_201580	CDS	ACA1_201580	NW_004457538.1	593466	595213	D	encoded by transcript ACA1_201580A; 6-phosphofructokinase precursor family protein	join(593466..593478,593645..593773,593895..593972,594077..594293,594375..594758,594854..595040,595133..595213)	Acanthamoeba castellanii str. Neff	14920621
ACA1_201590	CDS	ACA1_201590	NW_004457538.1	595242	596454	R	encoded by transcript ACA1_201590A; ankyrin repeat-containing protein	complement(join(595242..595597,595799..596008,596081..596202,596276..596454))	Acanthamoeba castellanii str. Neff	14920622
ACA1_201600	CDS	ACA1_201600	NW_004457538.1	596471	597334	R	encoded by transcript ACA1_201600A; uncharacterized protein	complement(join(596471..596713,596828..597334))	Acanthamoeba castellanii str. Neff	14920623
ACA1_201610	CDS	ACA1_201610	NW_004457538.1	597527	599712	D	encoded by transcript ACA1_201610A; uncharacterized protein	join(597527..597589,597691..597728,597824..597939,598098..598184,598250..598341,598471..598521,598549..598709,598817..598925,599015..599146,599264..599360,599439..599543,599624..599712)	Acanthamoeba castellanii str. Neff	14920624
ACA1_201620	CDS	ACA1_201620	NW_004457538.1	600478	606379	R	encoded by transcript ACA1_201620A; structural maintenance of chromosomes 5 smc5, putative	complement(join(600478..600524,600660..600760,600880..601040,601135..601235,601324..601421,601598..601842,601934..602284,602395..602454,602536..602639,602742..602841,602950..603063,603133..603227,603312..603371,603496..603580,603670..603751,603876..603968,604035..604302,604428..604519,604603..604706,604795..604861,604965..605084,605157..605249,605338..605579,605663..605764,605900..605984,606057..606379))	Acanthamoeba castellanii str. Neff	14920625
ACA1_201630	CDS	ACA1_201630	NW_004457538.1	606552	607007	D	encoded by transcript ACA1_201630A; Rpp14 family protein	join(606552..606714,606811..607007)	Acanthamoeba castellanii str. Neff	14920626
ACA1_201640	CDS	ACA1_201640	NW_004457538.1	607503	608468	D	encoded by transcript ACA1_201640A; uncharacterized protein	join(607503..607671,607760..607878,607973..608018,608107..608468)	Acanthamoeba castellanii str. Neff	14920627
ACA1_201650	CDS	ACA1_201650	NW_004457538.1	608649	609994	R	encoded by transcript ACA1_201650A; DNA repair protein RAD51, putative	complement(join(608649..609141,609218..609404,609480..609590,609684..609828,609902..609994))	Acanthamoeba castellanii str. Neff	14920628
ACA1_201660	CDS	ACA1_201660	NW_004457538.1	610223	612332	R	encoded by transcript ACA1_201660A; DEADbox ATP-dependent RNA helicase 35B, putative	complement(join(610223..610501,610660..610858,610940..611154,611205..612332))	Acanthamoeba castellanii str. Neff	14920629
ACA1_201670	CDS	ACA1_201670	NW_004457538.1	612502	614081	R	encoded by transcript ACA1_201670A; DNAJ heat shock domain containing protein	complement(join(612502..612678,612792..612893,612975..613092,613173..613273,613347..613441,613538..613667,613775..613835,613927..613976,614061..614081))	Acanthamoeba castellanii str. Neff	14920630
ACA1_261750	CDS	ACA1_261750	NW_004457532.1	97	5136	D	encoded by transcript ACA1_261750A; SAP domain containing protein	join(97..203,363..451,651..803,868..966,1025..1138,1203..1391,1491..1589,1655..1867,1942..2058,2129..2191,2270..2556,2611..>5136)	Acanthamoeba castellanii str. Neff	14920369
ACA1_261860	CDS	ACA1_261860	NW_004457532.1	5690	6559	D	encoded by transcript ACA1_261860A; uncharacterized protein	join(5690..6285,6379..6559)	Acanthamoeba castellanii str. Neff	14920402
ACA1_261970	CDS	ACA1_261970	NW_004457532.1	9385	10694	R	encoded by transcript ACA1_261970A; uncharacterized protein	complement(join(9385..9418,9452..9639,9744..9897,9998..10113,10224..10532,10626..10694))	Acanthamoeba castellanii str. Neff	14920391
ACA1_261980	CDS	ACA1_261980	NW_004457532.1	11198	12817	D	encoded by transcript ACA1_261980A; defective in cullin neddylation 1, putative	join(11198..11344,11423..11551,11690..11789,11869..12145,12225..12361,12473..12567,12662..12817)	Acanthamoeba castellanii str. Neff	14920392
ACA1_261990	CDS	ACA1_261990	NW_004457532.1	12914	14003	D	encoded by transcript ACA1_261990A; uncharacterized protein	join(12914..13301,13312..13400,13662..13790,13869..14003)	Acanthamoeba castellanii str. Neff	14920393
ACA1_262100	CDS	ACA1_262100	NW_004457532.1	14116	16836	D	encoded by transcript ACA1_262100A; jumonji domain containing 5, putative	join(14116..14286,14358..14486,16144..16836)	Acanthamoeba castellanii str. Neff	14920394
ACA1_262210	CDS	ACA1_262210	NW_004457532.1	16994	25429	R	encoded by transcript ACA1_262210A; ubiquitin domain containing protein	complement(join(16994..17258,17354..17504,17604..17723,17856..17975,18083..18256,18361..19369,19487..19589,19604..19995,20100..20435,20505..20623,20711..20987,21085..21176,21273..21473,21564..21682,21776..21885,21962..22104,22167..22715,22807..22882,22967..23344,23416..23729,23831..24179,24242..24466,24560..24889,24982..25114,25248..25429))	Acanthamoeba castellanii str. Neff	14920395
ACA1_262320	CDS	ACA1_262320	NW_004457532.1	25807	27169	R	encoded by transcript ACA1_262320A; BRCA1 C Terminus (BRCT) domain containing protein	complement(join(25807..26028,26191..26346,26437..26600,26738..26924,27035..27169))	Acanthamoeba castellanii str. Neff	14920396
ACA1_262330	CDS	ACA1_262330	NW_004457532.1	27708	31488	D	encoded by transcript ACA1_262330A; RhoGEF domain containing protein	join(27708..27771,27927..28038,28136..28205,28376..28458,28537..28651,28749..28859,28944..29007,29105..29208,29269..29355,29452..29727,29813..29942,30016..30177,30254..30378,30459..30596,30685..31356,31423..31488)	Acanthamoeba castellanii str. Neff	14920397
ACA1_262340	CDS	ACA1_262340	NW_004457532.1	31707	32334	R	encoded by transcript ACA1_262340A; uncharacterized protein	complement(join(31707..31903,32109..32334))	Acanthamoeba castellanii str. Neff	14920398
ACA1_262350	CDS	ACA1_262350	NW_004457532.1	32592	35574	D	encoded by transcript ACA1_262350A; Flavinbinding monooxygenase-like subfamily protein	join(32592..32667,32738..32800,32874..32990,33085..33229,33500..33679,33781..33969,34044..34103,34192..34249,34351..34408,34475..34569,34653..34710,34845..34981,35029..35269,35367..35433,35508..35574)	Acanthamoeba castellanii str. Neff	14920399
ACA1_262360	CDS	ACA1_262360	NW_004457532.1	35808	37687	R	encoded by transcript ACA1_262360A; protein arginine nmethyltransferase 2, putative	complement(join(35808..35985,36133..36396,36509..36630,36765..36839,36920..37062,37153..37337,37530..37687))	Acanthamoeba castellanii str. Neff	14920400
ACA1_262370	CDS	ACA1_262370	NW_004457532.1	37879	39112	D	encoded by transcript ACA1_262370A; uncharacterized protein	join(37879..38179,38260..38387,38478..38621,38721..38927,39014..39112)	Acanthamoeba castellanii str. Neff	14920401
ACA1_262380	CDS	ACA1_262380	NW_004457532.1	39284	40045	R	encoded by transcript ACA1_262380A; polysaccharide deacetylase domain containing protein	complement(39284..40045)	Acanthamoeba castellanii str. Neff	14920370
ACA1_262390	CDS	ACA1_262390	NW_004457532.1	40160	42904	R	encoded by transcript ACA1_262390A; uncharacterized protein	complement(join(40160..40398,40464..40586,40611..40671,40693..40851,40938..41075,41169..41205,41240..41295,41413..41531,41639..41695,41792..42037,42088..42178,42259..42328,42449..42508,42597..42679,42752..42904))	Acanthamoeba castellanii str. Neff	14920371
ACA1_262400	CDS	ACA1_262400	NW_004457532.1	43047	44926	D	encoded by transcript ACA1_262400A; putative glycoprotein endopeptidase kae1, putative	join(43047..43217,43303..43369,43470..43571,43672..43768,43851..43977,44094..44229,44341..44430,44530..44605,44695..44793,44884..44926)	Acanthamoeba castellanii str. Neff	14920372
ACA1_262410	CDS	ACA1_262410	NW_004457532.1	45682	51571	D	encoded by transcript ACA1_262410A; RNA recognition motif domain containing protein	join(45682..45809,46050..46174,46295..47115,47198..47346,47464..47615,47693..47938,48040..49490,49592..51571)	Acanthamoeba castellanii str. Neff	14920373
ACA1_262520	CDS	ACA1_262520	NW_004457532.1	54346	54852	R	encoded by transcript ACA1_262520A; core histone h2a/h2b/h3/h4 superfamily protein	complement(join(54346..54363,54544..54664,54707..54852))	Acanthamoeba castellanii str. Neff	14920374
ACA1_262530	CDS	ACA1_262530	NW_004457532.1	55169	56256	D	encoded by transcript ACA1_262530A; SH3 domain containing protein	join(55169..55300,55441..56256)	Acanthamoeba castellanii str. Neff	14920375
ACA1_262540	CDS	ACA1_262540	NW_004457532.1	56442	58886	R	encoded by transcript ACA1_262540A; tetratricopeptide repeat domain containing protein	complement(join(56442..56701,56832..57510,57602..58354,58440..58886))	Acanthamoeba castellanii str. Neff	14920376
ACA1_262550	CDS	ACA1_262550	NW_004457532.1	59051	60418	D	encoded by transcript ACA1_262550A; tRNA (guanineN1)-methyltransferase	join(59051..59545,59665..59814,59917..60063,60143..60248,60342..>60418)	Acanthamoeba castellanii str. Neff	14920377
ACA1_262660	CDS	ACA1_262660	NW_004457532.1	61263	63240	R	encoded by transcript ACA1_262660A; transcription factor tfiib repeat domain containing protein	complement(join(61263..61567,61627..61726,61799..61858,61963..62187,62283..62296,62628..62848,62939..63048,63157..63240))	Acanthamoeba castellanii str. Neff	14920378
ACA1_262770	CDS	ACA1_262770	NW_004457532.1	63415	66169	D	encoded by transcript ACA1_262770A; uncharacterized protein	join(63415..63511,63585..63640,63711..63768,63832..65207,65252..65702,65883..66169)	Acanthamoeba castellanii str. Neff	14920379
ACA1_262890	CDS	ACA1_262890	NW_004457532.1	68341	68810	R	encoded by transcript ACA1_262890A; transcription factor tfiib repeat domain containing protein	complement(join(68341..68438,68591..68810))	Acanthamoeba castellanii str. Neff	14920381
ACA1_263000	CDS	ACA1_263000	NW_004457532.1	70489	73269	R	encoded by transcript ACA1_263000A; Molybdenum cofactor sulfurase, putative	complement(join(70489..70579,70685..70717,70738..70798,70881..70950,71017..71144,71240..71357,71435..71536,71608..71784,71845..71981,72054..72172,72238..72331,72416..72550,72654..72908,73050..73269))	Acanthamoeba castellanii str. Neff	14920382
ACA1_263010	CDS	ACA1_263010	NW_004457532.1	74657	75289	D	encoded by transcript ACA1_263010A; uncharacterized protein	74657..75289	Acanthamoeba castellanii str. Neff	14920383
ACA1_263020	CDS	ACA1_263020	NW_004457532.1	75346	80987	R	encoded by transcript ACA1_263020A; Molybdenum cofactor sulfurase, putative	complement(join(75346..76019,76077..76534,76595..76758,76831..76870,76947..77247,77411..77510,77585..77689,77757..77981,78079..78157,78257..78371,78459..78528,78610..78737,78824..78941,79030..79131,79202..79378,79463..79599,79672..79790,79852..79921,80011..80153,80250..80471,80552..80634,80736..80816,80925..80987))	Acanthamoeba castellanii str. Neff	14920384
ACA1_263040	CDS	ACA1_263040	NW_004457532.1	82193	86726	R	encoded by transcript ACA1_263040A; kinesin motor domain containing protein	complement(join(82193..82588,82605..82648,82672..82696,82757..82891,82986..83551,83660..84027,84131..84238,84472..84594,84698..84881,85012..85437,85562..85742,85861..86184,86351..86573,86674..86726))	Acanthamoeba castellanii str. Neff	14920386
ACA1_263150	CDS	ACA1_263150	NW_004457532.1	86882	87660	R	encoded by transcript ACA1_263150A; uncharacterized protein	complement(join(86882..86917,87148..87409,87446..87660))	Acanthamoeba castellanii str. Neff	14920387
ACA1_263160	CDS	ACA1_263160	NW_004457532.1	87861	89254	R	encoded by transcript ACA1_263160A; transaldolase	complement(join(87861..88222,88374..88465,88596..88936,89084..89254))	Acanthamoeba castellanii str. Neff	14920388
ACA1_263170	CDS	ACA1_263170	NW_004457532.1	90718	92757	D	encoded by transcript ACA1_263170A; homeobox domain containing protein	join(90718..90748,90830..92337,92465..92511,92619..92757)	Acanthamoeba castellanii str. Neff	14920389
ACA1_263180	CDS	ACA1_263180	NW_004457532.1	93138	94895	D	encoded by transcript ACA1_263180A; uncharacterized protein	join(93138..93373,93526..93586,93669..93723,93856..94028,94138..94234,94362..94560,94733..94895)	Acanthamoeba castellanii str. Neff	14920390
ACA1_263190	CDS	ACA1_263190	NW_004457532.1	95126	98199	D	encoded by transcript ACA1_263190A; protein arginine Nmethyltransferase	join(95126..95208,95251..95410,95533..95697,95864..95951,96108..96271,96421..96670,96803..97132,97248..97437,97521..97629,98167..98199)	Acanthamoeba castellanii str. Neff	14919982
ACA1_263500	CDS	ACA1_263500	NW_004457532.1	101902	102739	D	encoded by transcript ACA1_263500A; polyprotein	join(101902..102236,102697..102739)	Acanthamoeba castellanii str. Neff	14919983
ACA1_263610	CDS	ACA1_263610	NW_004457532.1	103927	105581	D	encoded by transcript ACA1_263610A; uncharacterized protein	join(103927..104100,104192..104388,104477..104628,104874..104974,105076..105302,105563..105581)	Acanthamoeba castellanii str. Neff	14919984
ACA1_263820	CDS	ACA1_263820	NW_004457532.1	107038	107560	D	encoded by transcript ACA1_263820A; uncharacterized protein	join(107038..107523,107555..107560)	Acanthamoeba castellanii str. Neff	14919985
ACA1_263830	CDS	ACA1_263830	NW_004457532.1	107739	108412	D	encoded by transcript ACA1_263830A; uncharacterized protein	join(107739..108202,108379..108412)	Acanthamoeba castellanii str. Neff	14919986
ACA1_263840	CDS	ACA1_263840	NW_004457532.1	110795	113409	R	encoded by transcript ACA1_263840A; uncharacterized protein	complement(join(110795..111110,111477..111551,111615..111760,111865..111934,112025..112130,112225..112341,112430..112526,112635..112760,112870..112969,113042..113087,113196..113409))	Acanthamoeba castellanii str. Neff	14919987
ACA1_263850	CDS	ACA1_263850	NW_004457532.1	113765	120642	R	encoded by transcript ACA1_263850A; serine/threonine protein kinase, putative	complement(join(113765..113895,113976..114078,114183..114562,114668..115123,115213..115469,115595..116260,116353..116552,116629..116787,116875..116991,117083..117178,117263..117423,117506..117713,117778..117968,118083..118150,118263..118400,118590..118673,118745..118887,118992..119097,119273..119673,119798..120044,120125..120473,120567..120642))	Acanthamoeba castellanii str. Neff	14919988
ACA1_263860	CDS	ACA1_263860	NW_004457532.1	121044	122986	R	encoded by transcript ACA1_263860A; ribosomal protein s5, nterminal subfamily protein	complement(join(121044..121195,121307..121449,121547..121670,121792..121872,121973..122133,122241..122757,122884..122986))	Acanthamoeba castellanii str. Neff	14919989
ACA1_263870	CDS	ACA1_263870	NW_004457532.1	123152	124956	R	encoded by transcript ACA1_263870A; MAGE family protein	complement(join(123152..123350,123469..123582,123681..123783,123881..123953,124033..124121,124239..124317,124454..124597,124698..124823,124912..124956))	Acanthamoeba castellanii str. Neff	14919990
ACA1_263880	CDS	ACA1_263880	NW_004457532.1	125573	126424	D	encoded by transcript ACA1_263880A; dual specificity phosphatase, catalytic domain containing protein	125573..126424	Acanthamoeba castellanii str. Neff	14919991
ACA1_263890	CDS	ACA1_263890	NW_004457532.1	126641	127623	R	encoded by transcript ACA1_263890A; methyltransferase domain containing protein	complement(join(126641..126878,126975..127106,127202..127623))	Acanthamoeba castellanii str. Neff	14919992
ACA1_263900	CDS	ACA1_263900	NW_004457532.1	127729	131508	R	encoded by transcript ACA1_263900A; calponin domain containing protein	complement(join(127729..127997,128078..128237,128356..128517,128582..128660,128752..128917,129037..131015,131063..131508))	Acanthamoeba castellanii str. Neff	14919993
ACA1_263910	CDS	ACA1_263910	NW_004457532.1	132103	133493	R	encoded by transcript ACA1_263910A; Autophagyrelated protein 3, putative	complement(join(132103..132184,132277..132323,132465..132560,132647..132769,132845..132933,133046..133142,133205..133287,133356..133422,133485..133493))	Acanthamoeba castellanii str. Neff	14919994
ACA1_263920	CDS	ACA1_263920	NW_004457532.1	133915	135292	D	encoded by transcript ACA1_263920A; glutathione Stransferase kappa 1, putative	join(<133915..134034,134126..134552,134642..134751,134817..134842,134865..134913,135041..135109,135206..135292)	Acanthamoeba castellanii str. Neff	14919995
ACA1_263930	CDS	ACA1_263930	NW_004457532.1	135495	136449	R	encoded by transcript ACA1_263930A; uncharacterized protein	complement(join(135495..135594,135807..135927,135990..136079,136137..136220,136287..136449))	Acanthamoeba castellanii str. Neff	14919996
ACA1_263940	CDS	ACA1_263940	NW_004457532.1	136652	139685	R	encoded by transcript ACA1_263940A; uncharacterized protein	complement(join(136652..136707,136753..137338,137421..137615,137690..137956,138028..138179,138251..138369,138450..138529,138591..139003,139098..139261,139353..139487,139561..139685))	Acanthamoeba castellanii str. Neff	14919997
ACA1_263950	CDS	ACA1_263950	NW_004457532.1	140161	141126	R	encoded by transcript ACA1_263950A; dual specificity phosphatase, catalytic domain containing protein	complement(join(140161..140348,140417..140546,140629..140681,140758..140836,140974..141126))	Acanthamoeba castellanii str. Neff	14919998
ACA1_263960	CDS	ACA1_263960	NW_004457532.1	141217	142566	R	encoded by transcript ACA1_263960A; uncharacterized protein	complement(join(141217..141324,141403..141463,141575..141616,141787..141980,142114..142566))	Acanthamoeba castellanii str. Neff	14919999
ACA1_263970	CDS	ACA1_263970	NW_004457532.1	142727	144015	D	encoded by transcript ACA1_263970A; uncharacterized protein	join(142727..142894,143136..143199,143306..143367,143477..143591,143732..143766,143849..143917,143986..144015)	Acanthamoeba castellanii str. Neff	14920000
ACA1_263980	CDS	ACA1_263980	NW_004457532.1	144333	146355	D	encoded by transcript ACA1_263980A; DNA repair metallobeta-lactamase protein	join(144333..144419,144500..144610,144749..145741,145828..146355)	Acanthamoeba castellanii str. Neff	14920001
ACA1_263990	CDS	ACA1_263990	NW_004457532.1	146846	149485	R	encoded by transcript ACA1_263990A; uncharacterized protein	complement(146846..149485)	Acanthamoeba castellanii str. Neff	14920002
ACA1_264000	CDS	ACA1_264000	NW_004457532.1	149739	151030	R	encoded by transcript ACA1_264000A; class I glutamine amidotransferase domain containing protein	complement(join(149739..149917,150018..150041,150137..150363,150430..150579,150673..150751,150856..151030))	Acanthamoeba castellanii str. Neff	14920003
ACA1_264010	CDS	ACA1_264010	NW_004457532.1	151222	151845	D	encoded by transcript ACA1_264010A; proteasome subunit beta type2, putative	151222..151845	Acanthamoeba castellanii str. Neff	14920004
ACA1_264020	CDS	ACA1_264020	NW_004457532.1	152306	156133	D	encoded by transcript ACA1_264020A; uncharacterized protein	join(152306..152428,152601..152703,152778..152862,152966..153033,153158..153288,153395..153491,153566..153643,153746..154004,154111..154227,154318..154395,154499..154688,154781..155051,155127..155454,155560..156133)	Acanthamoeba castellanii str. Neff	14920005
ACA1_264030	CDS	ACA1_264030	NW_004457532.1	156625	157840	R	encoded by transcript ACA1_264030A; uncharacterized protein	complement(join(156625..156763,156832..157110,157175..157285,157351..157472,157579..157629,157703..157840))	Acanthamoeba castellanii str. Neff	14920006
ACA1_264050	CDS	ACA1_264050	NW_004457532.1	165231	168643	R	encoded by transcript ACA1_264050A; uncharacterized protein	complement(join(165231..165262,165330..165401,165525..165636,165713..165768,165840..165874,165982..166080,166127..166338,166408..166834,166921..167066,167152..167257,167320..167381,167467..167596,167666..167709,167779..167847,167919..168032,168105..168248,168320..168464,168558..168643))	Acanthamoeba castellanii str. Neff	14920008
ACA1_264060	CDS	ACA1_264060	NW_004457532.1	169307	169921	D	encoded by transcript ACA1_264060A; uncharacterized protein	join(169307..169702,169784..169921)	Acanthamoeba castellanii str. Neff	14920009
ACA1_264070	CDS	ACA1_264070	NW_004457532.1	170197	174220	D	encoded by transcript ACA1_264070A; uncharacterized protein	join(170197..170379,170511..170620,170686..171099,171172..171249,171357..171433,171511..171632,171728..171919,172014..172266,172338..172404,172479..172537,172635..173181,173277..173374,173453..173572,173663..173817,173901..174017,174080..174220)	Acanthamoeba castellanii str. Neff	14920010
ACA1_264080	CDS	ACA1_264080	NW_004457532.1	174343	175360	R	encoded by transcript ACA1_264080A; BSD domain containing protein	complement(join(174343..174504,174618..174855,174939..175065,175135..175360))	Acanthamoeba castellanii str. Neff	14920011
ACA1_264090	CDS	ACA1_264090	NW_004457532.1	175611	185817	D	encoded by transcript ACA1_264090A; class VII unconventional myosin, putative	join(175611..175751,175883..175989,176082..176165,176290..176397,176432..176543,176606..176669,176751..176764,176850..176916,176984..177087,177192..177321,177383..177557,177635..177728,177801..177973,178048..178210,178292..178559,178642..178711,178785..179014,179100..179222,179308..179683,179786..179893,180002..180164,180267..180336,180410..180557,180717..180816,180904..181038,181114..181198,181291..181380,181457..181633,181707..181806,181911..182050,182162..182291,182369..182489,182565..182710,182790..182931,183034..183079,183167..183379,183460..183770,183852..183937,184023..184149,184229..184378,184466..184670,184758..185020,185102..185426,185513..185604,185683..185817)	Acanthamoeba castellanii str. Neff	14920012
ACA1_264100	CDS	ACA1_264100	NW_004457532.1	186125	190317	D	encoded by transcript ACA1_264100A; calponin (CH) domain containing protein	join(186125..186211,186305..186548,186644..186848,186928..187006,187128..187715,187821..188077,188164..188458,188770..188829,188906..189048,189151..189241,189344..189490,189569..189710,189801..190071,190170..190317)	Acanthamoeba castellanii str. Neff	14920013
ACA1_264110	CDS	ACA1_264110	NW_004457532.1	190586	192099	D	encoded by transcript ACA1_264110A; ribosomal protein L3, putative	join(190586..190607,190693..191529,191762..192099)	Acanthamoeba castellanii str. Neff	14920014
ACA1_264120	CDS	ACA1_264120	NW_004457532.1	192393	194915	R	encoded by transcript ACA1_264120A; uncharacterized protein	complement(join(192393..193061,193151..193318,193447..193611,193744..194015,194153..194234,194307..194915))	Acanthamoeba castellanii str. Neff	14920015
ACA1_264130	CDS	ACA1_264130	NW_004457532.1	195141	197188	R	encoded by transcript ACA1_264130A; peptidyltRNA hydrolase domain containing protein	complement(join(195141..195434,195587..195679,195771..195923,196035..196219,196334..196424,196517..196663,196750..196868,196950..197085,197147..197188))	Acanthamoeba castellanii str. Neff	14920016
ACA1_264140	CDS	ACA1_264140	NW_004457532.1	198026	199960	D	encoded by transcript ACA1_264140A; homeobox domain containing protein	198026..199960	Acanthamoeba castellanii str. Neff	14920017
ACA1_264150	CDS	ACA1_264150	NW_004457532.1	200115	202395	R	encoded by transcript ACA1_264150A; gammaglutamyltranspeptidase	complement(join(200115..200414,200487..200549,200617..200738,200852..201266,201345..201585,201667..201817,201874..202087,202168..202227,202360..202395))	Acanthamoeba castellanii str. Neff	14920018
ACA1_264160	CDS	ACA1_264160	NW_004457532.1	202840	204030	D	encoded by transcript ACA1_264160A; tetratricopeptide repeat domain containing protein	join(202840..202987,203060..203107,203185..203588,203671..204030)	Acanthamoeba castellanii str. Neff	14920019
ACA1_264170	CDS	ACA1_264170	NW_004457532.1	204161	205184	R	encoded by transcript ACA1_264170A; uncharacterized protein	complement(join(204161..204499,204601..204899,204962..205184))	Acanthamoeba castellanii str. Neff	14920020
ACA1_264180	CDS	ACA1_264180	NW_004457532.1	205951	207220	D	encoded by transcript ACA1_264180A; oxidoreductase, short chain dehydrogenase/reductase superfamily protein	join(205951..206043,206125..206427,206506..206659,206723..206798,206890..206973,207073..207220)	Acanthamoeba castellanii str. Neff	14920021
ACA1_264190	CDS	ACA1_264190	NW_004457532.1	207712	209150	D	encoded by transcript ACA1_264190A; uncharacterized protein	join(207712..208263,208314..209150)	Acanthamoeba castellanii str. Neff	14920022
ACA1_264200	CDS	ACA1_264200	NW_004457532.1	209284	210148	R	encoded by transcript ACA1_264200A; uncharacterized protein	complement(join(209284..209393,209476..209712,209792..209942,210023..210148))	Acanthamoeba castellanii str. Neff	14920023
ACA1_264210	CDS	ACA1_264210	NW_004457532.1	210382	212112	R	encoded by transcript ACA1_264210A; uncharacterized protein	complement(210382..212112)	Acanthamoeba castellanii str. Neff	14920024
ACA1_264220	CDS	ACA1_264220	NW_004457532.1	212557	214711	D	encoded by transcript ACA1_264220A; uncharacterized protein	join(212557..212956,213019..213331,213420..213501,213593..213832,213938..214016,214078..214215,214376..214500,214583..214711)	Acanthamoeba castellanii str. Neff	14920025
ACA1_264230	CDS	ACA1_264230	NW_004457532.1	215303	216726	D	encoded by transcript ACA1_264230A; ATP/GTPbinding-like protein	join(215303..215364,215518..215636,215714..215862,215953..216003,216091..216345,216502..216726)	Acanthamoeba castellanii str. Neff	14920026
ACA1_264240	CDS	ACA1_264240	NW_004457532.1	216873	218945	R	encoded by transcript ACA1_264240A; DNA polymerase subunit Cdc27 protein	complement(join(216873..216951,217030..217120,217229..218574,218588..218738,218828..218945))	Acanthamoeba castellanii str. Neff	14920027
ACA1_264250	CDS	ACA1_264250	NW_004457532.1	220076	222333	D	encoded by transcript ACA1_264250A; uncharacterized protein	join(220076..220157,220273..220347,220609..220769,220836..221101,221182..221520,221652..222333)	Acanthamoeba castellanii str. Neff	14920028
ACA1_264260	CDS	ACA1_264260	NW_004457532.1	222886	226088	D	encoded by transcript ACA1_264260A; tetratricopeptide repeat domain containing protein	join(222886..222985,223078..223177,223301..223382,223521..223610,223703..223882,224050..224121,224247..224347,224475..224616,224708..224829,224924..225027,225134..225542,225649..225682,225699..225853,225968..226088)	Acanthamoeba castellanii str. Neff	14920029
ACA1_264270	CDS	ACA1_264270	NW_004457532.1	225944	228014	R	encoded by transcript ACA1_264270A; oxidoreductase, short chain dehydrogenase/reductase family protein	complement(join(<225944..226332,226433..226686,226776..227158,227254..227336,227518..227620,227702..227768,227865..228014))	Acanthamoeba castellanii str. Neff	14920030
ACA1_264280	CDS	ACA1_264280	NW_004457532.1	228276	229002	R	encoded by transcript ACA1_264280A; uncharacterized protein	complement(join(228276..228394,228481..228606,228723..229002))	Acanthamoeba castellanii str. Neff	14920031
ACA1_264290	CDS	ACA1_264290	NW_004457532.1	229328	231028	R	encoded by transcript ACA1_264290A; geranylgeranyl diphosphate synthase 1, putative	complement(join(229328..229423,229532..229608,229696..229822,229917..229995,230074..230134,230232..230333,230426..230542,230624..230670,230747..230901,230990..231028))	Acanthamoeba castellanii str. Neff	14920032
ACA1_264300	CDS	ACA1_264300	NW_004457532.1	231280	231714	R	encoded by transcript ACA1_264300A; uncharacterized protein	complement(231280..231714)	Acanthamoeba castellanii str. Neff	14920033
ACA1_264320	CDS	ACA1_264320	NW_004457532.1	235001	239466	R	encoded by transcript ACA1_264320A; PH domain containing protein	complement(join(235001..235282,235368..235487,235566..235736,235839..235944,236013..236209,236282..236376,236466..236693,236787..236866,236976..237124,237235..238962,239189..239246,239321..239466))	Acanthamoeba castellanii str. Neff	14920035
ACA1_264330	CDS	ACA1_264330	NW_004457532.1	239760	241258	D	encoded by transcript ACA1_264330A; alpha/beta hydrolase domain containing protein	join(239760..240115,240192..240267,240381..240438,240536..240681,240785..241258)	Acanthamoeba castellanii str. Neff	14920036
ACA1_264340	CDS	ACA1_264340	NW_004457532.1	241716	243979	D	encoded by transcript ACA1_264340A; uncharacterized protein	join(241716..242789,242908..243042,243131..243304,243401..243712,243791..243979)	Acanthamoeba castellanii str. Neff	14920037
ACA1_264360	CDS	ACA1_264360	NW_004457532.1	245722	250191	D	encoded by transcript ACA1_264360A; uncharacterized protein	join(245722..245838,245906..246051,246116..246407,246519..246726,246796..246833,246988..247110,247194..247246,247339..247574,247663..247829,247921..247982,248041..248119,248194..248365,248434..248513,248590..248808,248894..248999,249100..249206,249297..249483,249543..249632,249705..250014,250080..250191)	Acanthamoeba castellanii str. Neff	14920039
ACA1_264370	CDS	ACA1_264370	NW_004457532.1	250418	254700	D	encoded by transcript ACA1_264370A; RasGEF domain containing protein	join(250418..250439,250591..251805,251896..252378,252464..252604,252696..252859,252928..253050,253156..253221,253374..253472,253592..253750,253834..253950,254052..254149,254260..254365,254475..254604,254675..254700)	Acanthamoeba castellanii str. Neff	14920040
ACA1_264380	CDS	ACA1_264380	NW_004457532.1	254986	256432	R	encoded by transcript ACA1_264380A; Sformylglutathione hydrolase	complement(join(254986..255049,255113..255225,255322..255387,255478..255576,255667..255714,255792..255988,256088..256205,256289..256432))	Acanthamoeba castellanii str. Neff	14920041
ACA1_264390	CDS	ACA1_264390	NW_004457532.1	256590	257611	D	encoded by transcript ACA1_264390A; transmembrane emp24 protein transport domain containing 9 isoform 3, putative	join(256590..256967,256996..257107,257205..257275,257355..257473,257581..257611)	Acanthamoeba castellanii str. Neff	14920042
ACA1_264400	CDS	ACA1_264400	NW_004457532.1	258233	261164	D	encoded by transcript ACA1_264400A; uncharacterized protein	join(258233..258258,258361..258495,258579..258728,258838..258966,259062..259517,259647..260254,260414..260660,260774..260944,261017..261164)	Acanthamoeba castellanii str. Neff	14920043
ACA1_264410	CDS	ACA1_264410	NW_004457532.1	261254	261839	R	encoded by transcript ACA1_264410A; uncharacterized protein	complement(join(261254..261370,261454..261548,261617..261839))	Acanthamoeba castellanii str. Neff	14920044
ACA1_264420	CDS	ACA1_264420	NW_004457532.1	262036	265319	D	encoded by transcript ACA1_264420A; ABC transporter, ATPbinding domain containing protein	join(262036..262715,262890..263040,263131..263229,263378..263561,263661..263759,263861..263978,264064..264404,264475..264654,264760..264898,264995..265093,265169..265319)	Acanthamoeba castellanii str. Neff	14920045
ACA1_264440	CDS	ACA1_264440	NW_004457532.1	287121	288686	D	encoded by transcript ACA1_264440A; rhodanese family protein	join(287121..287226,287291..287401,287478..287523,287590..287646,287715..287799,287881..287964,288022..288132,288213..288362,288438..288686)	Acanthamoeba castellanii str. Neff	14920047
ACA1_264450	CDS	ACA1_264450	NW_004457532.1	289061	293458	D	encoded by transcript ACA1_264450A; RhoGAP domain containing protein	join(289061..289137,289182..289462,289546..289871,289977..290093,290158..290303,290427..290484,290567..290675,290741..290836,290911..291122,291189..291568,291647..291780,291842..291925,292033..292190,292279..292348,292433..292602,292659..292914,293007..293458)	Acanthamoeba castellanii str. Neff	14920048
ACA1_264460	CDS	ACA1_264460	NW_004457532.1	293633	294798	R	encoded by transcript ACA1_264460A; GTPbinding protein	complement(join(293633..293675,293833..293954,294031..294092,294172..294313,294428..294506,294623..294673,294743..294798))	Acanthamoeba castellanii str. Neff	14920049
ACA1_264470	CDS	ACA1_264470	NW_004457532.1	295117	295522	D	encoded by transcript ACA1_264470A; uncharacterized protein	join(295117..295307,295333..295422,295477..295522)	Acanthamoeba castellanii str. Neff	14920050
ACA1_264480	CDS	ACA1_264480	NW_004457532.1	301864	302672	D	encoded by transcript ACA1_264480A; uncharacterized protein	join(301864..301941,302012..302068,302392..302487,302568..302672)	Acanthamoeba castellanii str. Neff	14920051
ACA1_264490	CDS	ACA1_264490	NW_004457532.1	304468	305263	D	encoded by transcript ACA1_264490A; uncharacterized protein	join(304468..304688,304763..305121,305220..305263)	Acanthamoeba castellanii str. Neff	14920052
ACA1_264500	CDS	ACA1_264500	NW_004457532.1	305405	306085	R	encoded by transcript ACA1_264500A; uncharacterized protein	complement(305405..306085)	Acanthamoeba castellanii str. Neff	14920053
ACA1_264510	CDS	ACA1_264510	NW_004457532.1	306494	309727	R	encoded by transcript ACA1_264510A; zinc finger, c2h2 type domain containing protein	complement(join(306494..306505,306601..308162,308287..309727))	Acanthamoeba castellanii str. Neff	14920054
ACA1_264520	CDS	ACA1_264520	NW_004457532.1	310178	311737	R	encoded by transcript ACA1_264520A; cytochrome b-like heme/steroid binding domain containing protein	complement(join(310178..310205,310374..310437,310519..310619,310690..310768,310846..310968,311060..311158,311269..311737))	Acanthamoeba castellanii str. Neff	14920055
ACA1_264530	CDS	ACA1_264530	NW_004457532.1	312689	313362	D	encoded by transcript ACA1_264530A; acetyltransferase, GNAT family protein	join(312689..312986,313001..313362)	Acanthamoeba castellanii str. Neff	14920056
ACA1_264540	CDS	ACA1_264540	NW_004457532.1	313537	317742	R	encoded by transcript ACA1_264540A; ATPase, AAA domain containing protein	complement(join(313537..313730,313831..313984,314097..314255,314353..314451,314534..314668,314750..315030,315152..315268,315418..315479,315578..315678,315776..315865,315944..316098,316182..316469,316560..316709,316801..317022,317175..317573,317700..317742))	Acanthamoeba castellanii str. Neff	14920057
ACA1_264550	CDS	ACA1_264550	NW_004457532.1	317886	319897	D	encoded by transcript ACA1_264550A; Cys/Met metabolism PLPdependent enzyme superfamily protein	join(317886..317925,318008..318285,318376..318466,318588..318678,318760..318940,319034..319147,319253..319403,319498..319649,319733..319897)	Acanthamoeba castellanii str. Neff	14920058
ACA1_264560	CDS	ACA1_264560	NW_004457532.1	320055	324117	R	encoded by transcript ACA1_264560A; RasGEF domain containing protein	complement(join(320055..320220,320345..320944,321024..321117,321201..321283,321575..321761,321855..321926,322056..322206,322295..322339,322477..322565,322637..322716,322804..322976,323072..323171,323251..323349,323436..323551,323695..323795,323889..324117))	Acanthamoeba castellanii str. Neff	14920059
ACA1_264570	CDS	ACA1_264570	NW_004457532.1	324830	327128	D	encoded by transcript ACA1_264570A; SAM domain (Sterile alpha motif) domain containing protein	join(324830..324878,324964..325071,325165..325288,325423..325520,325599..325702,325805..325845,325906..326023,326108..326202,326279..326438,326517..326621,326700..326906,326979..327128)	Acanthamoeba castellanii str. Neff	14920060
ACA1_264580	CDS	ACA1_264580	NW_004457532.1	327302	329018	R	encoded by transcript ACA1_264580A; sphingomyelin phosphodiesterase, putative	complement(join(327302..327606,327686..327863,327945..328051,328127..328238,328320..328407,328486..328577,328651..328679,328749..328867,328936..329018))	Acanthamoeba castellanii str. Neff	14920061
ACA1_264590	CDS	ACA1_264590	NW_004457532.1	329194	330268	R	encoded by transcript ACA1_264590A; Hypothetical protein	complement(join(329194..329262,329328..329529,329613..329734,329802..329852,329919..330008,330068..330268))	Acanthamoeba castellanii str. Neff	14920062
ACA1_264600	CDS	ACA1_264600	NW_004457532.1	330590	335568	D	encoded by transcript ACA1_264600A; DNA polymerase I, putative	join(330590..330599,330668..331015,331120..331196,331221..331287,331377..331525,331620..331743,331852..331977,332082..332282,332376..332538,332565..332739,332883..333024,333098..333226,333314..333491,333562..333650,333732..333858,333897..334053,334143..334277,334359..334508,334744..335568)	Acanthamoeba castellanii str. Neff	14920063
ACA1_264610	CDS	ACA1_264610	NW_004457532.1	335666	337491	R	encoded by transcript ACA1_264610A; peptidase, M20/M25/M40 superfamily protein	complement(join(335666..335846,335953..336100,336221..336400,336494..336586,336678..336797,336937..337048,337180..337491))	Acanthamoeba castellanii str. Neff	14920064
ACA1_264620	CDS	ACA1_264620	NW_004457532.1	337812	340937	D	encoded by transcript ACA1_264620A; AMPbinding enzyme domain containing protein	join(<337812..337985,338034..340937)	Acanthamoeba castellanii str. Neff	14920065
ACA1_264630	CDS	ACA1_264630	NW_004457532.1	341092	342010	D	encoded by transcript ACA1_264630A; uncharacterized protein	join(341092..341255,341353..341467,341561..341711,341812..341880,341958..342010)	Acanthamoeba castellanii str. Neff	14920066
ACA1_264640	CDS	ACA1_264640	NW_004457532.1	342265	349745	D	encoded by transcript ACA1_264640A; uncharacterized protein	join(342265..342559,342630..342839,342917..343029,343133..343327,343340..343408,343502..343607,343700..343806,343905..344006,344096..344220,344382..344483,344555..344675,344770..344910,344987..345063,345156..345284,345353..345536,345615..346052,346108..346282,346376..346452,346553..346818,346891..346999,347090..347164,347240..348299,348345..348474,348585..348702,348793..348908,348980..349148,349231..349343,349430..349745)	Acanthamoeba castellanii str. Neff	14920067
ACA1_264650	CDS	ACA1_264650	NW_004457532.1	349829	351982	D	encoded by transcript ACA1_264650A; WD domain, G-beta repeat-containing protein	join(349829..349899,349991..350739,350818..350893,350973..351084,351190..351303,351386..351982)	Acanthamoeba castellanii str. Neff	14920068
ACA1_264660	CDS	ACA1_264660	NW_004457532.1	352495	354770	D	encoded by transcript ACA1_264660A; uncharacterized protein	join(352495..352611,352783..352913,353019..353103,353328..353456,353538..353769,353859..354013,354135..354770)	Acanthamoeba castellanii str. Neff	14920069
ACA1_264670	CDS	ACA1_264670	NW_004457532.1	354995	355387	R	encoded by transcript ACA1_264670A; uncharacterized protein	complement(354995..355387)	Acanthamoeba castellanii str. Neff	14920070
ACA1_264680	CDS	ACA1_264680	NW_004457532.1	356040	358137	D	encoded by transcript ACA1_264680A; non-specific protein-tyrosine kinase	join(356040..356206,356349..356495,356593..356686,356872..357026,357151..357346,357500..357996,358014..358137)	Acanthamoeba castellanii str. Neff	14920071
ACA1_264690	CDS	ACA1_264690	NW_004457532.1	358489	360670	D	encoded by transcript ACA1_264690A; polyprenyl synthetase superfamily protein	join(358489..358608,358709..359153,359300..359495,359610..359683,359855..360036,360173..360266,360340..360475,360532..360670)	Acanthamoeba castellanii str. Neff	14920072
ACA1_264700	CDS	ACA1_264700	NW_004457532.1	361208	361993	D	encoded by transcript ACA1_264700A; uncharacterized protein	361208..361993	Acanthamoeba castellanii str. Neff	14920073
ACA1_264710	CDS	ACA1_264710	NW_004457532.1	362551	367287	R	encoded by transcript ACA1_264710A; membranebound transcription factor protease, site 1 isoform 1, putative	complement(join(362551..362675,362782..363239,363314..363441,363512..363623,363767..363885,364032..364153,364295..364370,364466..364617,364689..364830,364937..365185,365278..365448,365493..365566,365664..365815,365921..366104,366206..366427,366513..366831,366898..367043,367110..367287))	Acanthamoeba castellanii str. Neff	14920074
ACA1_264720	CDS	ACA1_264720	NW_004457532.1	367666	368151	D	encoded by transcript ACA1_264720A; uncharacterized protein	367666..368151	Acanthamoeba castellanii str. Neff	14920075
ACA1_264730	CDS	ACA1_264730	NW_004457532.1	368261	369809	R	encoded by transcript ACA1_264730A; uncharacterized protein	complement(join(368261..368538,368615..368750,368842..368997,369083..369210,369299..369452,369564..369809))	Acanthamoeba castellanii str. Neff	14920076
ACA1_264740	CDS	ACA1_264740	NW_004457532.1	370640	371800	D	encoded by transcript ACA1_264740A; uncharacterized protein	370640..371800	Acanthamoeba castellanii str. Neff	14920077
ACA1_264750	CDS	ACA1_264750	NW_004457532.1	371978	372813	D	encoded by transcript ACA1_264750A; uncharacterized protein	join(371978..372081,372142..372281,372362..372486,372557..372624,372699..372813)	Acanthamoeba castellanii str. Neff	14920078
ACA1_264760	CDS	ACA1_264760	NW_004457532.1	372986	373794	D	encoded by transcript ACA1_264760A; uncharacterized protein	join(372986..373208,373270..373420,373509..373794)	Acanthamoeba castellanii str. Neff	14920079
ACA1_264770	CDS	ACA1_264770	NW_004457532.1	373942	375619	D	encoded by transcript ACA1_264770A; HSFtype DNA-binding domain containing protein	join(373942..374161,374240..374859,374905..375018,375089..375182,375348..375619)	Acanthamoeba castellanii str. Neff	14920080
ACA1_264780	CDS	ACA1_264780	NW_004457532.1	376181	376480	D	encoded by transcript ACA1_264780A; uncharacterized protein	376181..376480	Acanthamoeba castellanii str. Neff	14920081
ACA1_264790	CDS	ACA1_264790	NW_004457532.1	377034	377246	D	encoded by transcript ACA1_264790A; uncharacterized protein	377034..377246	Acanthamoeba castellanii str. Neff	14920082
ACA1_264800	CDS	ACA1_264800	NW_004457532.1	377408	378716	D	encoded by transcript ACA1_264800A; uncharacterized protein	join(377408..377609,377717..377828,377932..378083,378174..378308,378392..378555,378630..378716)	Acanthamoeba castellanii str. Neff	14920083
ACA1_264810	CDS	ACA1_264810	NW_004457532.1	378845	380870	D	encoded by transcript ACA1_264810A; leucine rich repeat domain containing protein	join(378845..378948,379072..379189,379260..379403,379430..379555,379656..379779,379904..380214,380255..380269,380355..380434,380561..380870)	Acanthamoeba castellanii str. Neff	14920084
ACA1_264820	CDS	ACA1_264820	NW_004457532.1	380893	383441	R	encoded by transcript ACA1_264820A; kelch repeatcontaining protein	complement(join(380893..381119,381218..381486,381571..381652,381730..381888,382035..382113,382217..383287,383427..383441))	Acanthamoeba castellanii str. Neff	14920085
ACA1_264830	CDS	ACA1_264830	NW_004457532.1	383703	385573	R	encoded by transcript ACA1_264830A; uncharacterized protein	complement(join(383703..383845,383955..384034,384158..384290,384415..385573))	Acanthamoeba castellanii str. Neff	14920086
ACA1_264840	CDS	ACA1_264840	NW_004457532.1	386194	388973	R	encoded by transcript ACA1_264840A; leucine rich repeat domain containing protein	complement(join(386194..386204,386285..386424,386469..386620,386702..386774,386843..386981,387055..387180,387250..387540,387613..387721,387939..387981,388055..388157,388235..388973))	Acanthamoeba castellanii str. Neff	14920087
ACA1_264850	CDS	ACA1_264850	NW_004457532.1	389466	390377	D	encoded by transcript ACA1_264850A; MaoClike domain containing protein	join(389466..389582,389655..389766,389858..389950,390063..390203,390280..390377)	Acanthamoeba castellanii str. Neff	14920088
ACA1_264860	CDS	ACA1_264860	NW_004457532.1	390470	392469	R	encoded by transcript ACA1_264860A; premRNA processing factor 3 (PRP3) protein	complement(join(390470..390560,390668..391039,391133..392469))	Acanthamoeba castellanii str. Neff	14920089
ACA1_264870	CDS	ACA1_264870	NW_004457532.1	393021	393937	D	encoded by transcript ACA1_264870A; polypeptide deformylase	join(393021..393143,393261..393415,393521..393648,393819..393937)	Acanthamoeba castellanii str. Neff	14920090
ACA1_264880	CDS	ACA1_264880	NW_004457532.1	394238	396688	D	encoded by transcript ACA1_264880A; uncharacterized protein	join(394238..394334,394438..394493,394607..394661,394751..394835,394944..395076,395213..395466,395582..395808,395914..396059,396205..396473,396577..396688)	Acanthamoeba castellanii str. Neff	14920091
ACA1_264890	CDS	ACA1_264890	NW_004457532.1	396781	398526	R	encoded by transcript ACA1_264890A; NAD dependent epimerase/dehydratase superfamily protein	complement(join(396781..397016,397117..397359,397474..397593,397702..397851,397967..398078,398159..398250,398349..398526))	Acanthamoeba castellanii str. Neff	14920092
ACA1_264900	CDS	ACA1_264900	NW_004457532.1	398810	399619	D	encoded by transcript ACA1_264900A; uncharacterized protein	join(398810..398954,398980..399005,399053..399619)	Acanthamoeba castellanii str. Neff	14920093
ACA1_264910	CDS	ACA1_264910	NW_004457532.1	400079	401538	D	encoded by transcript ACA1_264910A; uncharacterized protein	join(400079..400315,400570..400646,401041..401291,401318..401538)	Acanthamoeba castellanii str. Neff	14920094
ACA1_264920	CDS	ACA1_264920	NW_004457532.1	401865	408269	R	encoded by transcript ACA1_264920A; protein kinase domain containing protein	complement(join(401865..401969,402073..402194,402282..402347,402437..402704,402845..403021,403107..404018,404104..404229,404336..404446,404507..404632,404715..404825,404916..405041,405147..405257,405353..405478,405577..405687,405790..405915,406048..406158,406246..406377,406503..406613,406699..406824,406925..407007,407134..407269,407360..407447,407530..407687,407781..408029,408216..408269))	Acanthamoeba castellanii str. Neff	14920095
ACA1_264930	CDS	ACA1_264930	NW_004457532.1	408674	410007	D	encoded by transcript ACA1_264930A; uncharacterized protein	join(<408674..408716,408854..408985,409081..409191,409299..409624,409645..410007)	Acanthamoeba castellanii str. Neff	14920096
ACA1_265140	CDS	ACA1_265140	NW_004457532.1	411300	412667	R	encoded by transcript ACA1_265140A; uncharacterized protein	complement(join(<411300..411413,411503..411579,411689..411754,411871..412061,412195..412356,412464..412667))	Acanthamoeba castellanii str. Neff	14920097
ACA1_265250	CDS	ACA1_265250	NW_004457532.1	412779	415849	D	encoded by transcript ACA1_265250A; protein tyrosine kinase	join(<412779..412850,412958..413308,413392..413502,413593..413747,413847..414876,415034..415304,415391..415456,415538..415659,415745..415849)	Acanthamoeba castellanii str. Neff	14920098
ACA1_265260	CDS	ACA1_265260	NW_004457532.1	415943	416655	D	encoded by transcript ACA1_265260A; uncharacterized protein	join(415943..416110,416200..416306,416354..416422,416523..416655)	Acanthamoeba castellanii str. Neff	14920099
ACA1_265270	CDS	ACA1_265270	NW_004457532.1	416738	417173	D	encoded by transcript ACA1_265270A; Prefoldin subunit 6, putative	join(416738..416971,417066..417173)	Acanthamoeba castellanii str. Neff	14920100
ACA1_265280	CDS	ACA1_265280	NW_004457532.1	417693	419104	D	encoded by transcript ACA1_265280A; uncharacterized protein	join(417693..417803,417906..417980,418102..418206,418310..418415,418531..418673,418757..418869,418984..419104)	Acanthamoeba castellanii str. Neff	14920101
ACA1_265290	CDS	ACA1_265290	NW_004457532.1	419225	428693	R	encoded by transcript ACA1_265290A; PH domain containing protein	complement(join(419225..419299,419649..419782,419880..419993,420083..420159,420260..420325,420460..420650,420768..420929,421026..422368,422442..423017,423117..423221,423303..423435,423549..423685,423807..423914,423990..424136,424567..424749,424809..424940,425063..425191,425257..425587,425668..425876,425938..426228,426293..426418,426511..426663,426781..426918,427041..427187,427268..427417,427511..427633,427721..427849,427956..428084,428173..428293,428376..428441,428562..428693))	Acanthamoeba castellanii str. Neff	14920102
ACA1_265300	CDS	ACA1_265300	NW_004457532.1	428948	432699	D	encoded by transcript ACA1_265300A; COG4 transport protein	join(428948..429153,429229..429343,429428..429583,429656..429774,429850..429974,430054..430182,430260..430366,430438..430474,430606..430720,430806..430968,431044..431118,431200..431367,431438..431539,431616..431681,431746..431835,431914..431997,432057..432158,432246..432380,432444..432509,432634..432699)	Acanthamoeba castellanii str. Neff	14920103
ACA1_265310	CDS	ACA1_265310	NW_004457532.1	433037	436630	D	encoded by transcript ACA1_265310A; uncharacterized protein	join(433037..433077,433257..433415,433478..433595,433665..433735,433857..433953,434094..434474,434572..434759,434850..434929,435043..435221,435326..435621,435740..435934,436029..436108,436186..436239,436331..436452,436598..436630)	Acanthamoeba castellanii str. Neff	14920104
ACA1_265320	CDS	ACA1_265320	NW_004457532.1	437006	439039	R	encoded by transcript ACA1_265320A; uncharacterized protein	complement(join(437006..437102,437174..437450,437484..437573,437671..437730,437817..437892,437956..438340,438401..438476,438555..438680,438716..438858,438948..>439039))	Acanthamoeba castellanii str. Neff	14920105
ACA1_265330	CDS	ACA1_265330	NW_004457532.1	439401	440875	D	encoded by transcript ACA1_265330A; Factin-capping protein subunit alpha-2, putative	join(439401..439491,439637..439842,439917..439975,440063..440206,440336..440447,440537..440752,440861..440875)	Acanthamoeba castellanii str. Neff	14920106
ACA1_265340	CDS	ACA1_265340	NW_004457532.1	441477	449179	D	encoded by transcript ACA1_265340A; protein kinase domain containing protein	join(441477..441605,441761..441844,442169..442372,442517..442597,442681..442731,442811..442916,442984..443745,443824..444000,444080..444189,444284..444415,444506..445011,445126..445180,445279..445434,445526..445647,445884..446010,446128..446316,446410..446576,446658..446832,446928..447389,447482..447626,447716..447817,447895..448014,448109..448350,448436..449179)	Acanthamoeba castellanii str. Neff	14920107
ACA1_265360	CDS	ACA1_265360	NW_004457532.1	451560	452759	R	encoded by transcript ACA1_265360A; uncharacterized protein	complement(451560..452759)	Acanthamoeba castellanii str. Neff	14920109
ACA1_265370	CDS	ACA1_265370	NW_004457532.1	453245	454018	R	encoded by transcript ACA1_265370A; zinc finger, C3HC4 type (RING finger) domain containing protein	complement(join(453245..453553,453619..453773,453841..454018))	Acanthamoeba castellanii str. Neff	14920110
ACA1_265380	CDS	ACA1_265380	NW_004457532.1	454230	456573	R	encoded by transcript ACA1_265380A; Phosphatidylinositol glycan anchor biosynthesis, class S, putative	complement(join(454230..454661,454743..455003,455068..455141,455214..455303,455378..455492,455574..455635,455722..455824,455908..456011,456153..456573))	Acanthamoeba castellanii str. Neff	14920111
ACA1_265390	CDS	ACA1_265390	NW_004457532.1	457046	458334	D	encoded by transcript ACA1_265390A; TolAlike protein	join(457046..457134,457206..457362,457472..457592,457673..457854,457930..458334)	Acanthamoeba castellanii str. Neff	14920112
ACA1_265400	CDS	ACA1_265400	NW_004457532.1	458616	462651	D	encoded by transcript ACA1_265400A; vacuolar sorting protein, putative	join(458616..458666,458738..458872,458941..459037,459143..459266,459461..459646,459745..459952,460049..460180,460291..460446,460561..460709,460823..460963,461041..461179,461267..461347,461449..461742,461823..461892,461986..462137,462215..462367,462451..462651)	Acanthamoeba castellanii str. Neff	14920113
ACA1_265410	CDS	ACA1_265410	NW_004457532.1	462823	463116	R	encoded by transcript ACA1_265410A; uncharacterized protein	complement(462823..463116)	Acanthamoeba castellanii str. Neff	14920114
ACA1_265420	CDS	ACA1_265420	NW_004457532.1	463732	466088	D	encoded by transcript ACA1_265420A; uncharacterized protein	join(463732..464953,465025..465566,465727..465875,465938..466088)	Acanthamoeba castellanii str. Neff	14920115
ACA1_265430	CDS	ACA1_265430	NW_004457532.1	466164	468221	D	encoded by transcript ACA1_265430A; chromo' (CHRromatin Organization MOdifier) domain containing protein	join(466164..466197,466228..466286,466366..466401,466499..467107,467185..467241,467370..467454,467553..467776,467872..468023,468110..468221)	Acanthamoeba castellanii str. Neff	14920116
ACA1_265440	CDS	ACA1_265440	NW_004457532.1	468553	478557	D	encoded by transcript ACA1_265440A; myosin VIIa, putative	join(468553..468675,468920..468967,469081..469401,469571..469661,469769..469867,469955..470051,470137..470270,470393..470667,470768..470874,470971..471079,471173..471314,471383..471652,471755..471930,472073..472144,472225..472357,472432..472500,472578..472646,472750..472892,473046..473200,473280..473375,473450..473663,473758..473848,473934..473968,474014..474813,474919..475024,475144..475258,475344..475584,475684..475846,475934..476091,476244..476540,476633..476795,476885..476978,477070..477266,477393..477715,477810..477993,478121..478327,478498..478557)	Acanthamoeba castellanii str. Neff	14920117
ACA1_265450	CDS	ACA1_265450	NW_004457532.1	479224	483628	D	encoded by transcript ACA1_265450A; Sel1 repeat/Ubox domain containing protein	join(479224..479279,479379..479552,479655..479724,479818..480057,480102..480599,480713..480815,480894..481003,481112..481208,481282..481332,481407..481508,481627..481863,481984..482061,482129..482202,482277..482447,482519..482602,482688..482795,482902..483034,483117..483199,483276..483332,483398..483628)	Acanthamoeba castellanii str. Neff	14920118
ACA1_265460	CDS	ACA1_265460	NW_004457532.1	483823	486706	R	encoded by transcript ACA1_265460A; ribophorin ii (rpn2) protein	complement(join(483823..483933,484010..484153,484222..484384,484530..484651,484803..484913,484926..485167,485240..485420,485543..485731,485819..486706))	Acanthamoeba castellanii str. Neff	14920119
ACA1_265470	CDS	ACA1_265470	NW_004457532.1	486880	487827	D	encoded by transcript ACA1_265470A; pentapeptide repeat domain containing protein	486880..487827	Acanthamoeba castellanii str. Neff	14920120
ACA1_265480	CDS	ACA1_265480	NW_004457532.1	487977	492659	R	encoded by transcript ACA1_265480A; protein kinase domain containing protein	complement(join(487977..488834,488863..490323,490426..490477,490525..490864,490878..492488,492500..492659))	Acanthamoeba castellanii str. Neff	14920121
ACA1_265490	CDS	ACA1_265490	NW_004457532.1	493458	494558	D	encoded by transcript ACA1_265490A; Inosine-uridine preferring nucleoside hydrolase	join(493458..493616,493631..494010,494133..494433,494478..494558)	Acanthamoeba castellanii str. Neff	14920122
ACA1_265500	CDS	ACA1_265500	NW_004457532.1	494790	497354	R	encoded by transcript ACA1_265500A; Fbox domain containing protein	complement(join(494790..494988,495071..495229,495292..495421,495558..495735,495827..496064,496152..496810,496923..497020,497144..497354))	Acanthamoeba castellanii str. Neff	14920123
ACA1_265510	CDS	ACA1_265510	NW_004457532.1	497753	499212	D	encoded by transcript ACA1_265510A; palmitoylprotein thioesterase precursor, putative	join(497753..497858,497930..498057,498238..498417,498513..498618,498729..498871,498970..499212)	Acanthamoeba castellanii str. Neff	14920124
ACA1_265520	CDS	ACA1_265520	NW_004457532.1	499298	500902	R	encoded by transcript ACA1_265520A; uncharacterized protein	complement(join(499298..499559,499634..499770,499875..499964,500061..500149,500190..500238,500324..500421,500513..500621,500708..>500902))	Acanthamoeba castellanii str. Neff	14920125
ACA1_265530	CDS	ACA1_265530	NW_004457532.1	501352	502240	D	encoded by transcript ACA1_265530A; uncharacterized protein	join(501352..501381,501449..501504,501572..501628,501705..501837,501926..501988,502070..502240)	Acanthamoeba castellanii str. Neff	14920126
ACA1_265540	CDS	ACA1_265540	NW_004457532.1	502377	504899	R	encoded by transcript ACA1_265540A; uncharacterized protein	complement(join(502377..502563,502641..502825,502912..503015,503117..503310,503504..503581,503638..503824,503897..503963,504022..504186,504294..504392,504443..504554,504647..504687,504777..504899))	Acanthamoeba castellanii str. Neff	14920127
ACA1_265550	CDS	ACA1_265550	NW_004457532.1	505194	506818	R	encoded by transcript ACA1_265550A; EB1 protein, putative	complement(join(505194..505496,505585..505676,505745..505805,505882..506069,506240..506435,506523..506629,506683..506818))	Acanthamoeba castellanii str. Neff	14920128
ACA1_265560	CDS	ACA1_265560	NW_004457532.1	508416	512658	D	encoded by transcript ACA1_265560A; RFX DNAbinding domain containing protein	join(508416..508810,508916..509034,509123..509388,509465..509544,509611..509678,509750..509790,509814..509999,510095..510245,510316..510522,510627..510718,510807..510918,511001..511181,511274..511366,511458..512058,512125..512234,512358..512658)	Acanthamoeba castellanii str. Neff	14920129
ACA1_265570	CDS	ACA1_265570	NW_004457532.1	512984	513964	R	encoded by transcript ACA1_265570A; ribosomal proteins l2, RNA binding domain containing protein	complement(join(512984..513477,513551..513779,513914..513964))	Acanthamoeba castellanii str. Neff	14920130
ACA1_265580	CDS	ACA1_265580	NW_004457532.1	515025	516119	R	encoded by transcript ACA1_265580A; manganese and iron superoxide dismutase	complement(join(515025..515090,515160..515342,515437..515648,515758..515899,516057..516119))	Acanthamoeba castellanii str. Neff	14920131
ACA1_265590	CDS	ACA1_265590	NW_004457532.1	516279	517363	D	encoded by transcript ACA1_265590A; Thioredoxin family protein 1, putative	join(516279..516344,516429..516617,516737..516839,516966..517122,517228..517363)	Acanthamoeba castellanii str. Neff	14920132
ACA1_265600	CDS	ACA1_265600	NW_004457532.1	517634	524904	R	encoded by transcript ACA1_265600A; calponin domain containing protein	complement(join(517634..517763,517868..517934,518039..518162,518273..518437,518538..518716,518846..519074,519193..519453,519537..519701,519887..520227,520298..520508,520672..521358,521468..521863,521975..522422,522521..522785,522852..523128,523207..523530,523630..523791,523896..523974,524053..524147,524242..524360,524442..524679,524812..524904))	Acanthamoeba castellanii str. Neff	14920133
ACA1_265610	CDS	ACA1_265610	NW_004457532.1	525447	525989	R	encoded by transcript ACA1_265610A; uncharacterized protein	complement(525447..525989)	Acanthamoeba castellanii str. Neff	14920134
ACA1_265620	CDS	ACA1_265620	NW_004457532.1	526006	526560	R	encoded by transcript ACA1_265620A; myb transcription factor, putative	complement(join(526006..526071,526230..526325,526387..>526560))	Acanthamoeba castellanii str. Neff	14920135
ACA1_265830	CDS	ACA1_265830	NW_004457532.1	529273	530391	R	encoded by transcript ACA1_265830A; glucosyl hydrolase family protein	complement(join(529273..529497,529587..529631,529709..529863,529927..530035,530117..530187,530265..530391))	Acanthamoeba castellanii str. Neff	14920136
ACA1_265840	CDS	ACA1_265840	NW_004457532.1	530444	532021	R	encoded by transcript ACA1_265840A; glucosyl hydrolase family protein	complement(join(530444..530598,530682..530786,530862..530933,531011..531113,531208..531344,531416..531555,531625..531693,531732..531763,531824..532021))	Acanthamoeba castellanii str. Neff	14920137
ACA1_265850	CDS	ACA1_265850	NW_004457532.1	532314	535402	R	encoded by transcript ACA1_265850A; nicastrin protein	complement(join(532314..532518,532600..532760,532845..533020,533107..533176,533242..533383,533471..533684,533756..533925,533950..533995,534076..534261,534340..534574,534645..534748,534817..534887,534980..535112,535164..535280,535336..535402))	Acanthamoeba castellanii str. Neff	14920138
ACA1_265860	CDS	ACA1_265860	NW_004457532.1	535684	536175	R	encoded by transcript ACA1_265860A; core histone h2a/h2b/h3/h4 superfamily protein	complement(535684..536175)	Acanthamoeba castellanii str. Neff	14920139
ACA1_265870	CDS	ACA1_265870	NW_004457532.1	536513	536845	D	encoded by transcript ACA1_265870A; histone H4, putative	536513..536845	Acanthamoeba castellanii str. Neff	14920140
ACA1_265880	CDS	ACA1_265880	NW_004457532.1	537596	538087	R	encoded by transcript ACA1_265880A; core histone h2a/h2b/h3/h4 superfamily protein	complement(537596..538087)	Acanthamoeba castellanii str. Neff	14920141
ACA1_265890	CDS	ACA1_265890	NW_004457532.1	538338	539431	R	encoded by transcript ACA1_265890A; uncharacterized protein	complement(join(538338..538973,539057..539431))	Acanthamoeba castellanii str. Neff	14920142
ACA1_265900	CDS	ACA1_265900	NW_004457532.1	539602	543318	D	encoded by transcript ACA1_265900A; poly glycohydrolase family protein	join(539602..540509,540632..540713,540812..540913,541038..541279,541451..541590,541724..541813,541900..541947,542067..542113,542222..542308,542447..542526,542597..542632,542730..542982,543052..543135,543217..543318)	Acanthamoeba castellanii str. Neff	14920143
ACA1_265910	CDS	ACA1_265910	NW_004457532.1	543433	545818	R	encoded by transcript ACA1_265910A; Spc97 / Spc98 family protein	complement(join(543433..543669,543771..543953,544054..544279,544371..544452,544528..544674,544780..544885,544970..545155,545343..545422,545479..545818))	Acanthamoeba castellanii str. Neff	14920144
ACA1_265920	CDS	ACA1_265920	NW_004457532.1	547442	547838	R	encoded by transcript ACA1_265920A; uncharacterized protein	complement(join(547442..547596,547697..547838))	Acanthamoeba castellanii str. Neff	14920145
ACA1_265930	CDS	ACA1_265930	NW_004457532.1	548135	550799	R	encoded by transcript ACA1_265930A; tRNA(Ile)lysidine synthetase	complement(join(548135..548391,548480..548547,548630..548828,548943..548979,549062..549526,549637..549756,549850..550104,550204..550356,550472..550556,550640..550694,550757..550799))	Acanthamoeba castellanii str. Neff	14920146
ACA1_265940	CDS	ACA1_265940	NW_004457532.1	551217	551662	D	encoded by transcript ACA1_265940A; uncharacterized protein	join(551217..551316,551388..551456,551544..551662)	Acanthamoeba castellanii str. Neff	14920147
ACA1_265950	CDS	ACA1_265950	NW_004457532.1	552004	553431	R	encoded by transcript ACA1_265950A; golgi family protein, putative	complement(join(552004..552268,552368..552587,552660..552876,552967..553108,553200..553311,553401..553431))	Acanthamoeba castellanii str. Neff	14920148
ACA1_265960	CDS	ACA1_265960	NW_004457532.1	554059	554948	R	encoded by transcript ACA1_265960A; maltose Oacetyltransferase	complement(join(554059..554280,554392..554640,554745..554873,554943..554948))	Acanthamoeba castellanii str. Neff	14920149
ACA1_265970	CDS	ACA1_265970	NW_004457532.1	555713	561179	D	encoded by transcript ACA1_265970A; SAM domain (Sterile alpha motif) domain containing protein	join(555713..556880,556970..557040,557142..557215,557307..557412,557497..557555,557640..557747,557864..557956,558043..558162,558253..559853,559928..560679,560760..561179)	Acanthamoeba castellanii str. Neff	14920150
ACA1_265980	CDS	ACA1_265980	NW_004457532.1	561357	562835	D	encoded by transcript ACA1_265980A; uncharacterized protein	join(561357..561474,561622..561739,561912..562139,562310..562835)	Acanthamoeba castellanii str. Neff	14920151
ACA1_265990	CDS	ACA1_265990	NW_004457532.1	562956	563487	D	encoded by transcript ACA1_265990A; uncharacterized protein	join(562956..563103,563194..563300,563371..563487)	Acanthamoeba castellanii str. Neff	14920152
ACA1_266000	CDS	ACA1_266000	NW_004457532.1	563581	566880	R	encoded by transcript ACA1_266000A; 7, 8dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK), putative	complement(join(563581..563678,563763..563831,563944..564010,564083..564153,564245..564384,564491..564593,564695..564755,564827..564970,565091..565177,565257..565354,565437..565477,565558..565596,565684..565781,565897..565977,566071..566124,566221..566880))	Acanthamoeba castellanii str. Neff	14920153
ACA1_266010	CDS	ACA1_266010	NW_004457532.1	567696	570959	D	encoded by transcript ACA1_266010A; uncharacterized protein	join(567696..567768,567874..568318,568409..569072,569190..569389,569473..569631,569729..570083,570210..570676,570761..570959)	Acanthamoeba castellanii str. Neff	14920154
ACA1_266020	CDS	ACA1_266020	NW_004457532.1	571060	574183	R	encoded by transcript ACA1_266020A; hemolysintype calcium-binding region, putative	complement(join(571060..571238,571339..571508,571576..571795,571883..572086,572169..572271,572354..572479,572628..572754,572833..572994,573128..573222,573339..573458,573538..573618,573711..573892,574066..574183))	Acanthamoeba castellanii str. Neff	14920155
ACA1_266030	CDS	ACA1_266030	NW_004457532.1	574570	575519	R	encoded by transcript ACA1_266030A; uncharacterized protein	complement(join(574570..574590,574674..575345,575372..575455,575475..575519))	Acanthamoeba castellanii str. Neff	14920156
ACA1_266040	CDS	ACA1_266040	NW_004457532.1	578979	579321	D	encoded by transcript ACA1_266040A; uncharacterized protein	join(578979..579026,579097..579321)	Acanthamoeba castellanii str. Neff	14920157
ACA1_266050	CDS	ACA1_266050	NW_004457532.1	580779	581483	R	encoded by transcript ACA1_266050A; WD domain, G-beta repeat-containing protein	complement(join(580779..580912,580972..581101,581210..581242,581439..581483))	Acanthamoeba castellanii str. Neff	14920158
ACA1_266070	CDS	ACA1_266070	NW_004457532.1	585168	586946	R	encoded by transcript ACA1_266070A; uncharacterized protein	complement(585168..586946)	Acanthamoeba castellanii str. Neff	14920160
ACA1_266080	CDS	ACA1_266080	NW_004457532.1	588949	590294	R	encoded by transcript ACA1_266080A; DEAD/DEAH box helicase/helicase conserved Cterminal domain containing protein	complement(join(588949..589201,589367..589844,589916..590294))	Acanthamoeba castellanii str. Neff	14920161
ACA1_266090	CDS	ACA1_266090	NW_004457532.1	591023	594149	D	encoded by transcript ACA1_266090A; uncharacterized protein	join(591023..591062,591345..592220,592312..593573,593643..593722,593822..593961,594109..594149)	Acanthamoeba castellanii str. Neff	14920162
ACA1_266100	CDS	ACA1_266100	NW_004457532.1	594190	597014	D	encoded by transcript ACA1_266100A; Serine/threonineprotein kinase 3, putative	join(594190..594243,594357..594445,594487..594563,594659..594724,594838..594968,595064..595136,595231..595313,595377..595487,595628..596039,596116..596407,596519..596682,596794..597014)	Acanthamoeba castellanii str. Neff	14920163
ACA1_266110	CDS	ACA1_266110	NW_004457532.1	597458	605926	D	encoded by transcript ACA1_266110A; SPRY domain containing protein	join(597458..597484,597648..597838,597967..598014,598121..598189,598313..598391,598479..598590,598706..598857,598982..599098,599167..599282,599358..599404,599463..599544,599614..599727,599800..599882,599961..600059,600147..600284,600358..600494,600561..600719,600796..600952,601020..601183,601298..601405,601499..601576,601672..602169,602250..602392,602479..602609,602702..602836,602942..603026,603104..603305,603404..603538,603615..603685,603798..603926,603998..604097,604205..604268,604368..604485,604603..604768,604872..604980,605137..605264,605356..605502,605579..605713,605786..605926)	Acanthamoeba castellanii str. Neff	14920164
ACA1_266120	CDS	ACA1_266120	NW_004457532.1	606007	607977	D	encoded by transcript ACA1_266120A; SAM domain (Sterile alpha motif) domain containing protein	join(606007..606223,606429..606515,606590..606976,607086..607294,607407..607493,607675..607977)	Acanthamoeba castellanii str. Neff	14920165
ACA1_266130	CDS	ACA1_266130	NW_004457532.1	608333	611785	R	encoded by transcript ACA1_266130A; uncharacterized protein	complement(join(608333..608427,608693..608855,608921..609277,609504..609618,609731..609851,609933..610153,610276..610382,610467..610604,610718..610908,611002..611106,611230..611785))	Acanthamoeba castellanii str. Neff	14920166
ACA1_266140	CDS	ACA1_266140	NW_004457532.1	612137	613722	R	encoded by transcript ACA1_266140A; ASAH1 protein	complement(join(612137..612202,612276..612357,612423..612539,612610..612721,612820..612883,612961..613157,613281..613722))	Acanthamoeba castellanii str. Neff	14920167
ACA1_266150	CDS	ACA1_266150	NW_004457532.1	613842	618202	R	encoded by transcript ACA1_266150A; PBS lyase HEATlike repeat domain containing protein	complement(join(613842..614141,614233..614419,614567..614754,614857..615065,615149..615278,615383..615532,615596..615806,615908..615999,616071..616259,616347..616567,616629..616701,616794..616953,617022..617161,617240..617474,617567..617636,617727..617834,617920..618202))	Acanthamoeba castellanii str. Neff	14920168
ACA1_266160	CDS	ACA1_266160	NW_004457532.1	618733	619788	D	encoded by transcript ACA1_266160A; uncharacterized protein	join(618733..618928,619030..619170,619241..619410,619496..619615,619702..619788)	Acanthamoeba castellanii str. Neff	14920169
ACA1_266170	CDS	ACA1_266170	NW_004457532.1	619961	622826	R	encoded by transcript ACA1_266170A; Fbox domain containing protein	complement(join(619961..620269,620373..620479,620542..620657,620729..620797,620882..621086,621229..621362,621443..621537,621649..621723,621847..622015,622172..622285,622387..622826))	Acanthamoeba castellanii str. Neff	14920170
ACA1_266180	CDS	ACA1_266180	NW_004457532.1	623228	625474	D	encoded by transcript ACA1_266180A; ankyrin, putative	join(623228..623476,623608..623788,623879..624076,624158..624334,624424..624588,624691..624850,624947..625049,625110..625212,625290..625474)	Acanthamoeba castellanii str. Neff	14920171
ACA1_266190	CDS	ACA1_266190	NW_004457532.1	625661	628046	R	encoded by transcript ACA1_266190A; gluconolactonase, putative	complement(join(625661..626177,626306..626453,626549..626615,626708..626814,626888..627118,627182..627240,627303..627412,627528..627633,627727..627892,628007..628046))	Acanthamoeba castellanii str. Neff	14920172
ACA1_266200	CDS	ACA1_266200	NW_004457532.1	628499	630629	D	encoded by transcript ACA1_266200A; PX domain containing protein	join(628499..628720,628847..629414,629601..629771,629846..629982,630081..630161,630284..630404,630490..630629)	Acanthamoeba castellanii str. Neff	14920173
ACA1_266210	CDS	ACA1_266210	NW_004457532.1	630731	632158	R	encoded by transcript ACA1_266210A; uncharacterized protein	complement(join(630731..630932,631008..631215,631288..631625,631712..631833,631949..632158))	Acanthamoeba castellanii str. Neff	14920174
ACA1_266220	CDS	ACA1_266220	NW_004457532.1	632610	633632	D	encoded by transcript ACA1_266220A; adenylate kinase, putative	join(632610..633065,633159..633308,633417..633632)	Acanthamoeba castellanii str. Neff	14920175
ACA1_266230	CDS	ACA1_266230	NW_004457532.1	634149	639280	D	encoded by transcript ACA1_266230A; DIL domain containing protein	join(634149..634727,634928..635053,635150..635374,635467..636975,637062..637129,637291..637429,637520..637607,637703..638288,638371..638678,638769..638959,639035..639280)	Acanthamoeba castellanii str. Neff	14920176
ACA1_266240	CDS	ACA1_266240	NW_004457532.1	639679	642822	D	encoded by transcript ACA1_266240A; HEAT repeat domain containing protein	join(639679..639801,639868..640222,640372..640476,640589..640779,640870..641007,641110..641219,641319..641515,641589..641706,641796..641916,642026..642325,642397..642571,642695..642822)	Acanthamoeba castellanii str. Neff	14920177
ACA1_266250	CDS	ACA1_266250	NW_004457532.1	643021	643934	R	encoded by transcript ACA1_266250A; uncharacterized protein	complement(join(643021..643180,643286..643469,643586..643934))	Acanthamoeba castellanii str. Neff	14920178
ACA1_266260	CDS	ACA1_266260	NW_004457532.1	644555	647469	D	encoded by transcript ACA1_266260A; HEAT repeat domain containing protein	join(644555..645023,645134..645222,645391..645522,645617..645769,645861..645961,646054..646280,646351..646459,646551..646665,646813..647118,647191..647469)	Acanthamoeba castellanii str. Neff	14920179
ACA1_266270	CDS	ACA1_266270	NW_004457532.1	647905	649540	R	encoded by transcript ACA1_266270A; uncharacterized protein	complement(join(647905..648064,648182..648365,648512..648642,648749..648864,648967..649173,649275..649343,649436..649540))	Acanthamoeba castellanii str. Neff	14920180
ACA1_266280	CDS	ACA1_266280	NW_004457532.1	649740	652973	D	encoded by transcript ACA1_266280A; RhoGEF domain containing protein	join(649740..651086,651166..651301,651381..651619,651708..651784,651876..651981,652081..652281,652295..652397,652494..652691,652768..652973)	Acanthamoeba castellanii str. Neff	14920181
ACA1_266290	CDS	ACA1_266290	NW_004457532.1	653320	654015	D	encoded by transcript ACA1_266290A; Hypothetical protein	653320..654015	Acanthamoeba castellanii str. Neff	14920182
ACA1_266300	CDS	ACA1_266300	NW_004457532.1	654144	657500	D	encoded by transcript ACA1_266300A; viral a-type inclusion protein repeat-containing protein	654144..657500	Acanthamoeba castellanii str. Neff	14920183
ACA1_266310	CDS	ACA1_266310	NW_004457532.1	657568	658428	D	encoded by transcript ACA1_266310A; uncharacterized protein	657568..658428	Acanthamoeba castellanii str. Neff	14920184
ACA1_266320	CDS	ACA1_266320	NW_004457532.1	658941	662416	D	encoded by transcript ACA1_266320A; LIM domain containing protein	join(658941..659060,659177..659332,659401..659485,659550..659655,659751..660666,660768..660851,660962..661198,661282..661413,661540..661604,661672..661777,661877..662416)	Acanthamoeba castellanii str. Neff	14920185
ACA1_266330	CDS	ACA1_266330	NW_004457532.1	662633	665455	R	encoded by transcript ACA1_266330A; uncharacterized protein	complement(join(662633..662848,662949..663340,663488..663626,663736..663809,663948..664701,664783..665188,665307..665455))	Acanthamoeba castellanii str. Neff	14920186
ACA1_266340	CDS	ACA1_266340	NW_004457532.1	665588	668524	D	encoded by transcript ACA1_266340A; methyltransferase domain containing protein	join(665588..665753,665869..666072,666115..666230,666320..666488,666629..666811,666945..667148,667245..667361,667444..667562,667742..667782,667929..668035,668135..668263,668373..668524)	Acanthamoeba castellanii str. Neff	14920187
ACA1_266350	CDS	ACA1_266350	NW_004457532.1	668564	668976	R	encoded by transcript ACA1_266350A; uncharacterized protein	complement(join(668564..668793,668853..668976))	Acanthamoeba castellanii str. Neff	14920188
ACA1_266360	CDS	ACA1_266360	NW_004457532.1	669222	671186	D	encoded by transcript ACA1_266360A; HEAT repeat domain containing protein	join(669222..669473,669537..669650,669739..669898,669975..670138,670217..670450,670522..670682,670760..671186)	Acanthamoeba castellanii str. Neff	14920189
ACA1_266370	CDS	ACA1_266370	NW_004457532.1	671379	672558	D	encoded by transcript ACA1_266370A; methyltransferase domain containing protein	join(671379..671565,671665..671838,671954..672049,672164..672558)	Acanthamoeba castellanii str. Neff	14920190
ACA1_266380	CDS	ACA1_266380	NW_004457532.1	672666	676204	R	encoded by transcript ACA1_266380A; RhoGEF domain containing protein	complement(join(672666..672854,672965..673054,673140..673220,673301..673380,673518..673605,673713..673754,673852..673905,674012..674092,674243..674341,674482..674553,674669..674757,674837..674965,675056..675127,675298..675489,675522..675632,675753..675861,675965..676088,676128..676204))	Acanthamoeba castellanii str. Neff	14920191
ACA1_266390	CDS	ACA1_266390	NW_004457532.1	676482	679665	D	encoded by transcript ACA1_266390A; BTB/POZ domain containing protein	join(676482..676920,677096..677769,677892..678041,678130..678198,678307..678666,678856..678865,678926..679151,679239..679365,679477..679665)	Acanthamoeba castellanii str. Neff	14920192
ACA1_266500	CDS	ACA1_266500	NW_004457532.1	680154	682008	D	encoded by transcript ACA1_266500A; BTB/POZ domain containing protein	join(680154..680501,680599..680708,680861..680996,681305..681481,681622..681705,681883..682008)	Acanthamoeba castellanii str. Neff	14920193
ACA1_266510	CDS	ACA1_266510	NW_004457532.1	682129	685595	R	encoded by transcript ACA1_266510A; RhoGEF domain containing protein	complement(join(682129..682302,682461..682474,682637..682888,683006..683108,683317..683433,683540..683645,683763..683833,683973..684211,684321..684373,684449..684537,684680..684749,684869..684966,684981..685595))	Acanthamoeba castellanii str. Neff	14920194
ACA1_266520	CDS	ACA1_266520	NW_004457532.1	685809	686219	D	encoded by transcript ACA1_266520A; uncharacterized protein	685809..686219	Acanthamoeba castellanii str. Neff	14920195
ACA1_266530	CDS	ACA1_266530	NW_004457532.1	686434	689788	R	encoded by transcript ACA1_266530A; UBA/TSN domain containing protein	complement(join(686434..686535,686614..686740,686821..686990,687066..687161,687276..687407,687496..688265,688363..688416,688517..688648,688749..688843,688912..688983,689087..689218,689314..689425,689500..689788))	Acanthamoeba castellanii str. Neff	14920196
ACA1_266750	CDS	ACA1_266750	NW_004457532.1	702891	705007	R	encoded by transcript ACA1_266750A; ubiquitin domain containing protein	complement(join(702891..703126,703197..703371,703486..703581,703671..703874,703952..704077,704157..704273,704372..704441,704526..704625,704699..704771,704894..705007))	Acanthamoeba castellanii str. Neff	14920198
ACA1_266760	CDS	ACA1_266760	NW_004457532.1	705247	707468	D	encoded by transcript ACA1_266760A; uncharacterized protein	join(705247..705299,705390..705465,705530..705685,705815..705904,705979..706074,706146..706249,706623..706719,706872..706940,706986..707055,707161..707468)	Acanthamoeba castellanii str. Neff	14920199
ACA1_266770	CDS	ACA1_266770	NW_004457532.1	708091	709131	D	encoded by transcript ACA1_266770A; prolyl 4hydroxylase, alpha subunit	join(708091..708237,708361..708640,708721..708924,709052..709131)	Acanthamoeba castellanii str. Neff	14920200
ACA1_266780	CDS	ACA1_266780	NW_004457532.1	709330	712642	R	encoded by transcript ACA1_266780A; ribosomal RNA large subunit methyltransferase J, putative	complement(join(709330..709548,709650..709875,710007..710434,710681..710904,711124..711294,711416..711745,711847..711979,712040..712642))	Acanthamoeba castellanii str. Neff	14920201
ACA1_266790	CDS	ACA1_266790	NW_004457532.1	713947	714726	R	encoded by transcript ACA1_266790A; glutathione Stransferase	complement(713947..714726)	Acanthamoeba castellanii str. Neff	14920202
ACA1_266800	CDS	ACA1_266800	NW_004457532.1	715194	718880	D	encoded by transcript ACA1_266800A; protein kinase domain containing protein	join(715194..715660,715856..715934,716056..716152,716230..716391,716481..716658,716778..716880,716966..717748,717826..718179,718269..718880)	Acanthamoeba castellanii str. Neff	14920203
ACA1_266810	CDS	ACA1_266810	NW_004457532.1	719135	722185	R	encoded by transcript ACA1_266810A; uncharacterized protein	complement(join(719135..719404,719537..719647,719738..719842,719995..720120,720284..720368,720430..720627,720752..720838,720980..721173,721279..721414,721515..721616,721743..721938,722068..722185))	Acanthamoeba castellanii str. Neff	14920204
ACA1_266820	CDS	ACA1_266820	NW_004457532.1	722374	723916	D	encoded by transcript ACA1_266820A; methyltransferase domain containing protein	join(722374..722776,722904..722943,723031..723145,723267..723423,723520..723659,723779..723916)	Acanthamoeba castellanii str. Neff	14920205
ACA1_266830	CDS	ACA1_266830	NW_004457532.1	724343	727896	R	encoded by transcript ACA1_266830A; uncharacterized protein	complement(join(724343..724508,724548..724601,724742..724809,724976..725067,725154..725221,725338..725412,725515..725635,725764..725993,726130..726198,726324..726445,726547..726672,726789..726943,727083..727387,727462..727515,727618..727707,727826..727896))	Acanthamoeba castellanii str. Neff	14920206
ACA1_266840	CDS	ACA1_266840	NW_004457532.1	727985	729932	D	encoded by transcript ACA1_266840A; IQ calmodulinbinding domain containing protein	join(727985..728096,728464..728552,728650..728698,728836..728906,729241..729321,729408..729497,729626..729679,729837..729932)	Acanthamoeba castellanii str. Neff	14920207
ACA1_266850	CDS	ACA1_266850	NW_004457532.1	730263	731699	R	encoded by transcript ACA1_266850A; hardsurface induced protein 5, putative	complement(join(730263..730453,730533..730686,730809..730938,731208..731568,731648..731699))	Acanthamoeba castellanii str. Neff	14920208
ACA1_266860	CDS	ACA1_266860	NW_004457532.1	734490	735519	R	encoded by transcript ACA1_266860A; uncharacterized protein	complement(join(734490..734934,735047..735124,735169..735216,735227..735317,735372..735519))	Acanthamoeba castellanii str. Neff	14920209
ACA1_266870	CDS	ACA1_266870	NW_004457532.1	735788	740064	R	encoded by transcript ACA1_266870A; gelsolin repeat-containing protein	complement(join(735788..738127,738212..738313,738422..738518,738572..738752,738838..738966,739048..739194,739244..739692,739763..739837,740021..>740064))	Acanthamoeba castellanii str. Neff	14920210
ACA1_266880	CDS	ACA1_266880	NW_004457532.1	740673	745747	D	encoded by transcript ACA1_266880A; uncharacterized protein	join(740673..740952,741037..741191,741261..741351,741430..741578,741818..741935,741992..742108,742181..742253,742343..742507,742589..742663,742752..742849,742923..742982,743008..743093,743177..743280,743361..743532,743594..745747)	Acanthamoeba castellanii str. Neff	14920211
ACA1_266890	CDS	ACA1_266890	NW_004457532.1	745837	746769	R	encoded by transcript ACA1_266890A; glutathione Stransferase, C-terminal domain containing protein	complement(join(745837..746493,746662..746769))	Acanthamoeba castellanii str. Neff	14920212
ACA1_266900	CDS	ACA1_266900	NW_004457532.1	747204	749360	D	encoded by transcript ACA1_266900A; uncharacterized protein	join(747204..748092,748215..748309,748415..748540,748669..748779,748882..749028,749169..749360)	Acanthamoeba castellanii str. Neff	14920213
ACA1_266910	CDS	ACA1_266910	NW_004457532.1	749601	750860	R	encoded by transcript ACA1_266910A; gammaglutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase), putative	complement(join(749601..749980,750082..750395,750481..750567,750661..750860))	Acanthamoeba castellanii str. Neff	14920214
ACA1_266920	CDS	ACA1_266920	NW_004457532.1	751889	752377	D	encoded by transcript ACA1_266920A; uncharacterized protein	join(751889..752091,752128..752377)	Acanthamoeba castellanii str. Neff	14920215
ACA1_266930	CDS	ACA1_266930	NW_004457532.1	752603	753800	D	encoded by transcript ACA1_266930A; hydrolase, NUDIX domain containing protein	join(752603..753289,753396..753530,753651..753800)	Acanthamoeba castellanii str. Neff	14920216
ACA1_266940	CDS	ACA1_266940	NW_004457532.1	755809	756847	R	encoded by transcript ACA1_266940A; tetratricopeptide repeat domain containing protein	complement(join(755809..755929,756031..756127,756206..756384,756515..756588,756658..756759,756833..756847))	Acanthamoeba castellanii str. Neff	14920217
ACA1_266950	CDS	ACA1_266950	NW_004457532.1	757267	758806	D	encoded by transcript ACA1_266950A; uncharacterized protein	join(757267..757607,757702..757902,757977..758391,758459..758806)	Acanthamoeba castellanii str. Neff	14920218
ACA1_266960	CDS	ACA1_266960	NW_004457532.1	758926	763166	R	encoded by transcript ACA1_266960A; uncharacterized protein	complement(join(758926..759195,759331..759928,760107..760231,760344..760482,760549..760723,760867..760966,761069..761180,761243..761418,761547..761722,761804..762064,762176..762332,762463..762609,762697..762834,762957..763166))	Acanthamoeba castellanii str. Neff	14920219
ACA1_266970	CDS	ACA1_266970	NW_004457532.1	763378	766043	D	encoded by transcript ACA1_266970A; DnaK family superfamily protein	join(763378..763416,763480..763824,763916..764159,764282..764321,764411..764502,764584..764726,764822..765039,765218..765335,765431..765586,765733..765832,765931..766043)	Acanthamoeba castellanii str. Neff	14920220
ACA1_266980	CDS	ACA1_266980	NW_004457532.1	766123	768175	R	encoded by transcript ACA1_266980A; methyltransferase domain containing protein	complement(join(766123..766314,766378..766539,766644..766736,766885..766989,767086..767243,767330..767495,767577..767770,767878..768175))	Acanthamoeba castellanii str. Neff	14920221
ACA1_266990	CDS	ACA1_266990	NW_004457532.1	768780	771758	D	encoded by transcript ACA1_266990A; Las1 family protein	join(768780..769078,769160..769254,769371..769501,769597..769747,769835..769940,770039..770119,770249..770351,770491..770639,770720..770835,770963..771077,771158..771249,771370..771448,771557..771758)	Acanthamoeba castellanii str. Neff	14920222
ACA1_267000	CDS	ACA1_267000	NW_004457532.1	772509	775181	D	encoded by transcript ACA1_267000A; camp-dependent protein kinase catalytic subunit family protein	join(772509..772955,773032..773280,773469..773629,773789..773895,773985..774417,774533..774652,774745..775010,775096..775181)	Acanthamoeba castellanii str. Neff	14920223
ACA1_267010	CDS	ACA1_267010	NW_004457532.1	775550	776128	R	encoded by transcript ACA1_267010A; uncharacterized protein	complement(775550..776128)	Acanthamoeba castellanii str. Neff	14920224
ACA1_267020	CDS	ACA1_267020	NW_004457532.1	776396	777140	D	encoded by transcript ACA1_267020A; uncharacterized protein	join(776396..776445,776629..776733,776773..776810,776911..777140)	Acanthamoeba castellanii str. Neff	14920225
ACA1_267030	CDS	ACA1_267030	NW_004457532.1	777385	779246	D	encoded by transcript ACA1_267030A; WD domain, Gbeta repeat-containing protein	join(777385..777490,777556..777910,777992..778342,778357..778451,778578..778723,778815..778959,779035..779246)	Acanthamoeba castellanii str. Neff	14920226
ACA1_267040	CDS	ACA1_267040	NW_004457532.1	779536	782293	R	encoded by transcript ACA1_267040A; Nin one binding (NOB1) Zn-ribbon family protein	complement(join(779536..779938,780059..780141,780246..780407,780530..781174,781266..781408,781495..781953,782263..782293))	Acanthamoeba castellanii str. Neff	14920227
ACA1_267050	CDS	ACA1_267050	NW_004457532.1	782471	782976	R	encoded by transcript ACA1_267050A; uncharacterized protein	complement(join(782471..782691,782919..782976))	Acanthamoeba castellanii str. Neff	14920228
ACA1_267070	CDS	ACA1_267070	NW_004457532.1	785697	786084	R	encoded by transcript ACA1_267070A; uncharacterized protein	complement(join(785697..785761,785867..785918,785956..786084))	Acanthamoeba castellanii str. Neff	14920230
ACA1_267080	CDS	ACA1_267080	NW_004457532.1	786754	794181	D	encoded by transcript ACA1_267080A; serine/threonine protein kinase, putative	join(<786754..786831,787001..787075,787221..787358,787446..787754,787821..787905,787978..788263,788329..788522,788600..788736,788788..789057,789152..789410,789512..789659,789730..790249,790336..790452,790539..790903,791011..791161,791306..791709,791798..791965,792052..792308,792558..792832,792937..793105,793251..793559,793871..794181)	Acanthamoeba castellanii str. Neff	14920231
ACA1_267090	CDS	ACA1_267090	NW_004457532.1	794249	798034	D	encoded by transcript ACA1_267090A; protein kinase domain containing protein	join(794249..794342,794416..794556,794677..794754,794867..794986,795097..795203,795275..795440,795521..795702,795776..795885,795957..796573,796694..796783,796969..797012,797131..797292,797395..797595,797699..797788,797927..798034)	Acanthamoeba castellanii str. Neff	14920232
ACA1_267100	CDS	ACA1_267100	NW_004457532.1	798094	800962	R	encoded by transcript ACA1_267100A; prolyltrna synthetase, mitochondrial, putative	complement(join(798094..798272,798339..798600,798666..799130,799217..799343,799431..799509,799644..799826,799943..800072,800184..800266,800392..800482,800567..800711,800841..800962))	Acanthamoeba castellanii str. Neff	14920233
ACA1_267110	CDS	ACA1_267110	NW_004457532.1	801384	802684	D	encoded by transcript ACA1_267110A; uncharacterized protein	join(801384..801595,801682..801768,801851..802007,802090..802246,802314..802684)	Acanthamoeba castellanii str. Neff	14920234
ACA1_267130	CDS	ACA1_267130	NW_004457532.1	803746	806174	R	encoded by transcript ACA1_267130A; OTU family cysteine protease	complement(join(803746..803902,804024..804571,804588..804753,804843..804964,805052..805101,805207..805390,805645..805780,805978..806174))	Acanthamoeba castellanii str. Neff	14920236
ACA1_267140	CDS	ACA1_267140	NW_004457532.1	806999	808811	R	encoded by transcript ACA1_267140A; GTP binding protein	complement(join(806999..807034,807126..807317,807453..807990,808097..808257,808410..808509,808651..808811))	Acanthamoeba castellanii str. Neff	14920237
ACA1_267150	CDS	ACA1_267150	NW_004457532.1	808968	810837	R	encoded by transcript ACA1_267150A; protoheme IX farnesyltransferase	complement(join(808968..809142,809229..809342,809415..809526,809617..809704,809828..810000,810210..810331,810465..810602,810788..810837))	Acanthamoeba castellanii str. Neff	14920238
ACA1_267160	CDS	ACA1_267160	NW_004457532.1	811295	812337	R	encoded by transcript ACA1_267160A; uncharacterized protein	complement(join(811295..811474,811538..811613,811692..811804,811872..811923,812027..812139,812215..812337))	Acanthamoeba castellanii str. Neff	14920239
ACA1_267170	CDS	ACA1_267170	NW_004457532.1	812512	813944	D	encoded by transcript ACA1_267170A; START domain containing protein	join(812512..812580,812680..812778,812850..812943,813087..813218,813265..813387,813485..813552,813653..813758,813838..813944)	Acanthamoeba castellanii str. Neff	14920240
ACA1_267180	CDS	ACA1_267180	NW_004457532.1	814307	824172	D	encoded by transcript ACA1_267180A; carbamoylphosphate synthase, large subunit	join(814307..814536,814873..814962,815064..815440,815564..815732,815842..816206,816297..816424,816507..816631,816730..816902,816985..817148,817300..817584,817614..817820,817920..818130,818215..818429,818572..818865,818935..819082,819165..819505,819603..819883,819973..820198,820275..820423,820512..820737,820854..821069,821159..821317,821396..821516,821635..822027,822097..822173,822269..822849,822950..823271,823359..823562,823675..823795,823884..823986,824076..824172)	Acanthamoeba castellanii str. Neff	14920241
ACA1_267190	CDS	ACA1_267190	NW_004457532.1	824342	826446	R	encoded by transcript ACA1_267190A; thioredoxin domain containing protein	complement(join(824342..824486,824582..824714,824804..824906,824958..825077,825167..825269,825374..825624,825711..825802,825844..826006,826096..826162,826238..826446))	Acanthamoeba castellanii str. Neff	14920242
ACA1_267200	CDS	ACA1_267200	NW_004457532.1	827187	830151	D	encoded by transcript ACA1_267200A; uncharacterized protein	join(827187..827352,827463..827812,827920..828122,828221..828308,828389..828445,828546..828639,828680..828766,828873..829182,829318..829400,829522..829758,829841..829931,830076..830151)	Acanthamoeba castellanii str. Neff	14920243
ACA1_267210	CDS	ACA1_267210	NW_004457532.1	830240	831530	R	encoded by transcript ACA1_267210A; Hypothetical protein	complement(join(830240..830355,830429..830496,830573..830789,830991..831062,831153..831249,831332..831377,831469..831530))	Acanthamoeba castellanii str. Neff	14920244
ACA1_267220	CDS	ACA1_267220	NW_004457532.1	831756	832119	D	encoded by transcript ACA1_267220A; uncharacterized protein	join(831756..831903,832031..832119)	Acanthamoeba castellanii str. Neff	14920245
ACA1_267230	CDS	ACA1_267230	NW_004457532.1	832323	835104	R	encoded by transcript ACA1_267230A; methylenetetrahydrofolate reductase	complement(join(832323..832553,832700..832878,832990..833345,833449..833528,833617..833823,833938..834197,834282..834365,834503..834532,834600..834848,835017..835104))	Acanthamoeba castellanii str. Neff	14920246
ACA1_267240	CDS	ACA1_267240	NW_004457532.1	835485	836529	R	encoded by transcript ACA1_267240A; ubiquitinprotein ligase	complement(join(835485..835609,835731..835859,836044..836096,836202..836316,836451..836529))	Acanthamoeba castellanii str. Neff	14920247
ACA1_267250	CDS	ACA1_267250	NW_004457532.1	837035	838402	D	encoded by transcript ACA1_267250A; oxidoreductase, short chain dehydrogenase/reductase superfamily protein	join(837035..837110,837190..837327,837407..837475,837568..837628,837713..837744,837853..838048,838153..838402)	Acanthamoeba castellanii str. Neff	14920248
ACA1_267260	CDS	ACA1_267260	NW_004457532.1	838629	840329	D	encoded by transcript ACA1_267260A; methyltransferase domain containing protein	join(838629..838649,838718..838915,839021..839120,839188..839291,839392..839560,839613..839752,839831..839972,840298..840329)	Acanthamoeba castellanii str. Neff	14920249
ACA1_267270	CDS	ACA1_267270	NW_004457532.1	841487	842071	R	encoded by transcript ACA1_267270A; ribosomal protein L14, putative	complement(join(841487..841789,841902..842003,842042..842071))	Acanthamoeba castellanii str. Neff	14920250
ACA1_267280	CDS	ACA1_267280	NW_004457532.1	842465	845717	D	encoded by transcript ACA1_267280A; coatomer subunit gamma, putative	join(842465..842495,842636..842835,842927..843045,843167..843332,843422..843642,843731..844325,844419..845717)	Acanthamoeba castellanii str. Neff	14920251
ACA1_267290	CDS	ACA1_267290	NW_004457532.1	845942	848246	D	encoded by transcript ACA1_267290A; uncharacterized protein	join(845942..846551,846694..846789,846904..847104,847198..847407,847519..847625,847708..847779,847895..848029,848109..848246)	Acanthamoeba castellanii str. Neff	14920252
ACA1_267300	CDS	ACA1_267300	NW_004457532.1	848397	851943	R	encoded by transcript ACA1_267300A; inositol polyphosphate phosphatase, putative	complement(join(848397..848654,848756..848869,848972..849096,849190..849247,849381..849443,849674..849886,849985..850180,850266..850547,850650..850873,850981..851171,851290..851401,851470..851670,851707..851943))	Acanthamoeba castellanii str. Neff	14920253
ACA1_267310	CDS	ACA1_267310	NW_004457532.1	852439	854803	R	encoded by transcript ACA1_267310A; PHDfinger domain containing protein	complement(join(852439..852612,852707..852778,852918..853058,853116..853211,853340..853827,853957..854060,854148..854160,854313..854452,854625..854803))	Acanthamoeba castellanii str. Neff	14920254
ACA1_267320	CDS	ACA1_267320	NW_004457532.1	854900	855936	R	encoded by transcript ACA1_267320A; yiaA/B two helix domain containing protein	complement(join(854900..855046,855135..855337,855412..855539,855812..855936))	Acanthamoeba castellanii str. Neff	14920255
ACA1_267330	CDS	ACA1_267330	NW_004457532.1	856242	859036	D	encoded by transcript ACA1_267330A; cyclic nucleotidebinding domain containing protein	join(856242..856541,856766..856895,857027..857160,857362..857456,857561..857626,857714..857787,857899..858059,858143..858263,858410..858531,858604..858667,858723..858808,858905..859036)	Acanthamoeba castellanii str. Neff	14920256
ACA1_267340	CDS	ACA1_267340	NW_004457532.1	859182	860657	R	encoded by transcript ACA1_267340A; CBS domain containing protein	complement(join(859182..859259,859365..859511,859581..859690,859750..859813,859893..859947,860035..860179,860254..860409,860534..860657))	Acanthamoeba castellanii str. Neff	14920257
ACA1_267460	CDS	ACA1_267460	NW_004457532.1	865034	865345	R	encoded by transcript ACA1_267460A; glutathione S-transferase, C-terminal domain containing protein	complement(865034..>865345)	Acanthamoeba castellanii str. Neff	14920259
ACA1_267570	CDS	ACA1_267570	NW_004457532.1	866453	866839	D	encoded by transcript ACA1_267570A; uncharacterized protein	join(866453..866566,866664..866739,866754..866839)	Acanthamoeba castellanii str. Neff	14920260
ACA1_267680	CDS	ACA1_267680	NW_004457532.1	867836	869562	R	encoded by transcript ACA1_267680A; uncharacterized protein	complement(join(867836..867951,867969..869562))	Acanthamoeba castellanii str. Neff	14920261
ACA1_267690	CDS	ACA1_267690	NW_004457532.1	869867	870202	R	encoded by transcript ACA1_267690A; ubiquinol:cytochrome c oxidoreductase 8 kDa subunit	complement(join(869867..869899,870023..870202))	Acanthamoeba castellanii str. Neff	14920262
ACA1_267700	CDS	ACA1_267700	NW_004457532.1	870614	871798	D	encoded by transcript ACA1_267700A; uncharacterized protein	join(870614..871089,871378..871607,871689..871798)	Acanthamoeba castellanii str. Neff	14920263
ACA1_267810	CDS	ACA1_267810	NW_004457532.1	872456	873160	D	encoded by transcript ACA1_267810A; uncharacterized protein	join(872456..872973,873052..873160)	Acanthamoeba castellanii str. Neff	14920264
ACA1_267820	CDS	ACA1_267820	NW_004457532.1	873706	877200	D	encoded by transcript ACA1_267820A; RRM3/PIF1 helicase, putative	join(873706..873716,873758..873847,873996..874669,874783..874937,875018..875143,875294..875433,875549..875656,875731..875960,876030..876070,876090..876145,876278..876342,876449..876540,876629..876756,876843..877200)	Acanthamoeba castellanii str. Neff	14920265
ACA1_267830	CDS	ACA1_267830	NW_004457532.1	877355	877657	D	encoded by transcript ACA1_267830A; uncharacterized protein	join(877355..877477,877541..877657)	Acanthamoeba castellanii str. Neff	14920266
ACA1_267840	CDS	ACA1_267840	NW_004457532.1	877738	879740	R	encoded by transcript ACA1_267840A; UV radiation resistance associated protein	complement(join(877738..877828,877960..878039,878157..878253,878376..878483,878624..878669,878829..878904,879015..879214,879327..879538,879697..879740))	Acanthamoeba castellanii str. Neff	14920267
ACA1_267860	CDS	ACA1_267860	NW_004457532.1	885438	887933	R	encoded by transcript ACA1_267860A; Endomembrane protein 70 subfamily	complement(join(885438..885588,885673..885901,885996..886081,886163..886256,886421..887126,887280..887377,887452..887556,887630..887933))	Acanthamoeba castellanii str. Neff	14920269
ACA1_267870	CDS	ACA1_267870	NW_004457532.1	888653	890889	D	encoded by transcript ACA1_267870A; uncharacterized protein	join(888653..888682,888798..888952,889032..889104,889220..889408,889512..889946,890032..890168,890264..890466,890560..890692,890775..890889)	Acanthamoeba castellanii str. Neff	14920270
ACA1_267880	CDS	ACA1_267880	NW_004457532.1	891042	891766	R	encoded by transcript ACA1_267880A; ribosomal protein L22, putative	complement(join(891042..891254,891348..891619,891721..891766))	Acanthamoeba castellanii str. Neff	14920271
ACA1_267890	CDS	ACA1_267890	NW_004457532.1	891997	892986	R	encoded by transcript ACA1_267890A; uncharacterized protein	complement(join(891997..892097,892164..892335,892481..892753,892852..892986))	Acanthamoeba castellanii str. Neff	14920272
ACA1_267900	CDS	ACA1_267900	NW_004457532.1	893268	896964	D	encoded by transcript ACA1_267900A; brefeldin A resistance factor, putative	join(893268..893417,893505..893574,893685..893816,893967..894085,894205..894313,894451..894735,894824..894942,895119..895243,895356..895521,896083..896220,896344..896482,896648..896751,896869..>896964)	Acanthamoeba castellanii str. Neff	14920273
ACA1_268110	CDS	ACA1_268110	NW_004457532.1	898222	899173	D	encoded by transcript ACA1_268110A; brefeldin A resistance guanine nucleotide exchange factor 1 family protein	join(898222..898237,898494..898606,898749..898901,899125..899155,899166..899173)	Acanthamoeba castellanii str. Neff	14920274
ACA1_268420	CDS	ACA1_268420	NW_004457532.1	901068	904873	D	encoded by transcript ACA1_268420A; uncharacterized protein	join(901068..901190,901419..901510,901688..901784,901925..901995,902140..902233,902334..902485,902644..902764,902882..902964,903126..903280,903395..903468,903674..903832,903886..904004,904112..904211,904341..904413,904558..904673,904769..904873)	Acanthamoeba castellanii str. Neff	14920275
ACA1_268430	CDS	ACA1_268430	NW_004457532.1	905183	907433	R	encoded by transcript ACA1_268430A; SAM domain (Sterile alpha motif) domain containing protein	complement(join(905183..905691,905839..905997,906115..906362,906475..906609,906709..906826,907038..907121,907220..907433))	Acanthamoeba castellanii str. Neff	14920276
ACA1_268540	CDS	ACA1_268540	NW_004457532.1	908190	911207	D	encoded by transcript ACA1_268540A; RasGEF domain containing protein	join(908190..908225,908335..908443,908587..908633,908700..908858,908950..909078,909178..909294,909407..909521,909627..909739,909984..910079,910206..911207)	Acanthamoeba castellanii str. Neff	14920277
ACA1_268750	CDS	ACA1_268750	NW_004457532.1	911750	912567	D	encoded by transcript ACA1_268750A; Protein-disulfide reductase	join(911750..911892,912049..912240,912429..912567)	Acanthamoeba castellanii str. Neff	14920278
ACA1_268760	CDS	ACA1_268760	NW_004457532.1	913045	917958	R	encoded by transcript ACA1_268760A; protein kinase domain containing protein	complement(join(913045..913155,913258..913387,913506..913551,913659..913682,913790..913901,913982..914008,914045..914167,914341..914592,914720..914879,915011..915198,915244..915416,915559..915655,915766..915794,916019..916101,916297..916360,916559..916621,916748..916788,916910..916922,917063..917114,917308..917444,917603..917800,917952..917958))	Acanthamoeba castellanii str. Neff	14920279
ACA1_268770	CDS	ACA1_268770	NW_004457532.1	918261	930141	R	encoded by transcript ACA1_268770A; HEAT repeat domain containing protein	complement(join(918261..918568,918743..918959,919276..919503,919628..919966,920147..920278,920403..920534,920627..920752,920827..921038,921169..921274,921418..921587,921825..922059,922259..922636,922718..922934,923022..923176,923430..923585,923738..923939,924037..924101,924239..924360,924472..924637,924751..924828,925020..925112,925257..925385,925656..925785,925897..926048,926242..926346,927179..927282,927523..927623,927722..927843,928055..928189,928390..928559,928723..928939,929161..929271,929371..929521,929678..930141))	Acanthamoeba castellanii str. Neff	14920280
ACA1_268880	CDS	ACA1_268880	NW_004457532.1	930327	931133	D	encoded by transcript ACA1_268880A; ribosomal protein S9, putative	join(930327..930386,930492..930738,930988..931133)	Acanthamoeba castellanii str. Neff	14920281
ACA1_268890	CDS	ACA1_268890	NW_004457532.1	931715	932906	D	encoded by transcript ACA1_268890A; adenylate kinase 1, putative	join(931715..931852,932092..932210,932422..932495,932647..932906)	Acanthamoeba castellanii str. Neff	14920282
ACA1_268900	CDS	ACA1_268900	NW_004457532.1	933031	934276	D	encoded by transcript ACA1_268900A; adenylate kinase	join(933031..933282,933368..933427,933658..933783,933925..934098,934259..934276)	Acanthamoeba castellanii str. Neff	14920283
ACA1_268910	CDS	ACA1_268910	NW_004457532.1	937149	938758	R	encoded by transcript ACA1_268910A; elongation factor 1-gamma family protein	complement(join(937149..937859,937952..938197,938296..938348,938422..938629,938750..938758))	Acanthamoeba castellanii str. Neff	14920284
ACA1_268920	CDS	ACA1_268920	NW_004457532.1	939024	943775	R	encoded by transcript ACA1_268920A; oxoglutarate dehydrogenase (succinyltransferring), E1 component, putative	complement(join(939024..939702,939859..940037,940122..940263,940416..940624,940761..941444,941677..941914,942059..942148,942263..942403,942512..942622,942744..942913,942929..942990,943376..943775))	Acanthamoeba castellanii str. Neff	14920285
ACA1_268930	CDS	ACA1_268930	NW_004457532.1	944241	946424	D	encoded by transcript ACA1_268930A; PWI domain containing protein	join(944241..944267,944368..944457,944618..944740,944881..945051,945141..945260,945363..945505,945665..946301,946362..946424)	Acanthamoeba castellanii str. Neff	14920286
ACA1_268940	CDS	ACA1_268940	NW_004457532.1	946636	949569	R	encoded by transcript ACA1_268940A; uncharacterized protein	complement(join(946636..946782,947126..947244,947327..947385,948246..949387,949531..949569))	Acanthamoeba castellanii str. Neff	14920287
ACA1_269150	CDS	ACA1_269150	NW_004457532.1	951327	959311	D	encoded by transcript ACA1_269150A; RhoGAP domain containing protein	join(951327..951468,951753..951956,952127..952181,952402..952417,952511..952551,952647..952769,952995..953001,953182..953449,953534..953611,953776..953996,954074..954169,954257..955755,955867..955891,956076..956236,956370..956765,957060..957117,957245..957554,957684..957782,958003..958083,958183..958268,958462..958519,958605..958683,958807..958879,959000..959106,959212..959311)	Acanthamoeba castellanii str. Neff	14920288
ACA1_269260	CDS	ACA1_269260	NW_004457532.1	959466	960889	R	encoded by transcript ACA1_269260A; Ras family protein	complement(join(959466..959544,959685..959768,959844..959981,960105..960246,960381..960397,960510..960577,960676..960749,960856..960889))	Acanthamoeba castellanii str. Neff	14920289
ACA1_269270	CDS	ACA1_269270	NW_004457532.1	961364	963131	D	encoded by transcript ACA1_269270A; stage ii sporulation protein e (spoiie) domain containing protein	join(961364..961793,961912..961979,962103..962223,962344..962462,962616..963131)	Acanthamoeba castellanii str. Neff	14920290
ACA1_269280	CDS	ACA1_269280	NW_004457532.1	963830	965298	R	encoded by transcript ACA1_269280A; RNA methyltransferase protein	complement(join(963830..964272,964434..964523,964605..964944,965014..965298))	Acanthamoeba castellanii str. Neff	14920291
ACA1_269290	CDS	ACA1_269290	NW_004457532.1	965436	967414	D	encoded by transcript ACA1_269290A; zinc finger, C3HC4 type (RING finger) domain containing protein	join(965436..965510,965562..965618,965629..965717,965837..966006,966177..966277,966398..966527,966626..966738,966828..966912,967011..967414)	Acanthamoeba castellanii str. Neff	14920292
ACA1_269300	CDS	ACA1_269300	NW_004457532.1	967540	968113	R	encoded by transcript ACA1_269300A; uncharacterized protein	complement(join(967540..967672,967833..967910,968004..968113))	Acanthamoeba castellanii str. Neff	14920293
ACA1_269310	CDS	ACA1_269310	NW_004457532.1	968295	970904	R	encoded by transcript ACA1_269310A; uncharacterized protein	complement(join(968295..968330,968452..968504,968608..968680,968805..968920,969005..969133,969222..969460,969557..969708,969882..969944,970064..970198,970295..970383,970509..970536,970669..970806,970881..970904))	Acanthamoeba castellanii str. Neff	14920294
ACA1_269320	CDS	ACA1_269320	NW_004457532.1	971155	972517	R	encoded by transcript ACA1_269320A; eIF2 gamma, putative	complement(join(971155..971302,971372..971642,971722..971980,972072..972191,972320..972517))	Acanthamoeba castellanii str. Neff	14920295
ACA1_269330	CDS	ACA1_269330	NW_004457532.1	972619	973241	R	encoded by transcript ACA1_269330A; translation initiation factor 2 gamma subunit	complement(join(972619..972812,972901..972987,973091..973241))	Acanthamoeba castellanii str. Neff	14920296
ACA1_269340	CDS	ACA1_269340	NW_004457532.1	973908	976717	R	encoded by transcript ACA1_269340A; amidophosphoribosyltransferase	complement(join(973908..974059,974166..974292,974379..974454,974564..974718,974798..974913,974988..975129,975213..975374,975459..975641,975763..975903,976025..976123,976291..976370,976482..976555,976638..976717))	Acanthamoeba castellanii str. Neff	14920297
ACA1_269350	CDS	ACA1_269350	NW_004457532.1	977158	983717	R	encoded by transcript ACA1_269350A; phosphoribosylformylglycinamidine synthase	complement(join(977158..977383,977478..977622,977745..978003,978197..978389,978472..978581,978665..978758,978832..979108,979242..979425,979531..979693,979795..980003,980124..980377,980483..980573,980676..980777,980873..981000,981112..981442,981539..981630,981695..981705,981722..981809,981933..981998,982072..982208,982282..982377,982469..982557,982665..982784,982910..983042,983143..983276,983386..983412,983452..983570,983651..983717))	Acanthamoeba castellanii str. Neff	14920298
ACA1_269360	CDS	ACA1_269360	NW_004457532.1	984139	984814	D	encoded by transcript ACA1_269360A; uncharacterized protein	join(984139..984178,984308..984399,984441..984573,984639..984814)	Acanthamoeba castellanii str. Neff	14920299
ACA1_269370	CDS	ACA1_269370	NW_004457532.1	985908	990254	D	encoded by transcript ACA1_269370A; uncharacterized protein	join(985908..987220,987277..987500,987541..987882,988071..988175,988297..989527,989653..989744,989845..989902,990011..990060,990121..990254)	Acanthamoeba castellanii str. Neff	14920300
ACA1_269380	CDS	ACA1_269380	NW_004457532.1	990747	993297	D	encoded by transcript ACA1_269380A; uncharacterized protein	join(990747..991130,991245..991275,991378..991502,991636..993297)	Acanthamoeba castellanii str. Neff	14920301
ACA1_269390	CDS	ACA1_269390	NW_004457532.1	993754	995929	D	encoded by transcript ACA1_269390A; hydrolase, alpha/beta fold domain containing protein	join(993754..993928,994008..994045,994152..994240,994310..994395,994544..994621,994739..994812,994944..995032,995102..995237,995386..995448,995531..995584,995705..995929)	Acanthamoeba castellanii str. Neff	14920302
ACA1_269400	CDS	ACA1_269400	NW_004457532.1	996060	996737	D	encoded by transcript ACA1_269400A; uncharacterized protein	996060..996737	Acanthamoeba castellanii str. Neff	14920303
ACA1_269410	CDS	ACA1_269410	NW_004457532.1	997102	999421	D	encoded by transcript ACA1_269410A; PH domain containing protein	join(997102..997374,997496..997725,997812..997914,998021..998087,998210..998367,998452..998583,998649..998727,998855..998965,999037..999172,999247..999421)	Acanthamoeba castellanii str. Neff	14920304
ACA1_269430	CDS	ACA1_269430	NW_004457532.1	1003636	1004438	D	encoded by transcript ACA1_269430A; uncharacterized protein	join(1003636..1003705,1003794..1003879,1003985..1004080,1004156..1004282,1004376..1004418,1004432..1004438)	Acanthamoeba castellanii str. Neff	14920306
ACA1_269440	CDS	ACA1_269440	NW_004457532.1	1004424	1005084	R	encoded by transcript ACA1_269440A; uncharacterized protein	complement(join(1004424..1004622,1004693..1004778,1004989..1005084))	Acanthamoeba castellanii str. Neff	14920307
ACA1_269650	CDS	ACA1_269650	NW_004457532.1	1006180	1007209	D	encoded by transcript ACA1_269650A; uncharacterized protein	join(1006180..1006249,1006338..1006423,1006504..1006599,1006675..1006801,1006895..1007022,1007049..1007093,1007126..1007209)	Acanthamoeba castellanii str. Neff	14920308
ACA1_269660	CDS	ACA1_269660	NW_004457532.1	1008765	1010766	D	encoded by transcript ACA1_269660A; replication fork protection component swi3 protein	join(1008765..1009100,1009181..1009256,1009332..1009378,1009466..1009747,1009846..1010766)	Acanthamoeba castellanii str. Neff	14920309
ACA1_269670	CDS	ACA1_269670	NW_004457532.1	1010877	1013457	R	encoded by transcript ACA1_269670A; tetratricopeptide repeat domain containing protein	complement(join(1010877..1010966,1011079..1011158,1011256..1011366,1011498..1011564,1011638..1011784,1011941..1011994,1012132..1012237,1012363..1012454,1012543..1012746,1012841..1012991,1013063..1013158,1013321..1013457))	Acanthamoeba castellanii str. Neff	14920310
ACA1_269680	CDS	ACA1_269680	NW_004457532.1	1015100	1017975	R	encoded by transcript ACA1_269680A; orotidine 5'phosphate decarboxylase	complement(join(1015100..1015177,1015492..1015544,1015639..1015779,1015858..1016051,1016142..1016214,1016291..1016408,1016490..1016581,1016647..1016797,1016882..1016990,1017097..1017228,1017378..1017467,1017579..1017674,1017809..1017975))	Acanthamoeba castellanii str. Neff	14920311
ACA1_269690	CDS	ACA1_269690	NW_004457532.1	1018300	1019250	D	encoded by transcript ACA1_269690A; uncharacterized protein	join(1018300..1018474,1018577..1019250)	Acanthamoeba castellanii str. Neff	14920312
ACA1_269700	CDS	ACA1_269700	NW_004457532.1	1019375	1020377	R	encoded by transcript ACA1_269700A; peptidase C56, PfpI, putative	complement(join(1019375..1019433,1019547..1019702,1019786..1019976,1020101..1020199,1020298..1020377))	Acanthamoeba castellanii str. Neff	14920313
ACA1_269710	CDS	ACA1_269710	NW_004457532.1	1020780	1025069	D	encoded by transcript ACA1_269710A; WD domain, Gbeta repeat-containing protein	join(1020780..1022823,1022925..1023029,1023130..1023210,1023331..1023427,1023570..1023689,1023799..1023943,1024111..1024213,1024334..1024395,1024497..1024593,1024694..1024827,1024941..1025069)	Acanthamoeba castellanii str. Neff	14920314
ACA1_269720	CDS	ACA1_269720	NW_004457532.1	1025432	1026425	D	encoded by transcript ACA1_269720A; EF hand domain containing protein	join(1025432..1025606,1025736..1025879,1025996..1026122,1026209..1026247,1026335..1026425)	Acanthamoeba castellanii str. Neff	14920315
ACA1_269730	CDS	ACA1_269730	NW_004457532.1	1026625	1029411	D	encoded by transcript ACA1_269730A; Ser/Thr phosphatase family protein	join(1026625..1026630,1026720..1026795,1026910..1027056,1027220..1027320,1027476..1027580,1027747..1027788,1027933..1028102,1028228..1028806,1028882..1029026,1029107..1029176,1029257..1029411)	Acanthamoeba castellanii str. Neff	14920316
ACA1_269740	CDS	ACA1_269740	NW_004457532.1	1029508	1031748	R	encoded by transcript ACA1_269740A; uncharacterized protein	complement(join(1029508..1029624,1029923..1030089,1030184..1030244,1030396..1030516,1030641..1030744,1030905..1030979,1031075..1031182,1031330..1031496,1031640..1031748))	Acanthamoeba castellanii str. Neff	14920317
ACA1_269750	CDS	ACA1_269750	NW_004457532.1	1031852	1032811	D	encoded by transcript ACA1_269750A; uncharacterized protein	join(1031852..1032178,1032261..1032282,1032379..1032454,1032556..1032640,1032737..1032811)	Acanthamoeba castellanii str. Neff	14920318
ACA1_269760	CDS	ACA1_269760	NW_004457532.1	1033276	1035022	D	encoded by transcript ACA1_269760A; bacterial transferase hexapeptide (three repeats) repeatcontaining protein	join(1033276..1033660,1033792..1034685,1034817..1035022)	Acanthamoeba castellanii str. Neff	14920319
ACA1_269770	CDS	ACA1_269770	NW_004457532.1	1035444	1037113	D	encoded by transcript ACA1_269770A; uncharacterized protein	join(1035444..1035923,1036010..1036137,1036234..1036335,1036607..1036883,1036976..1037113)	Acanthamoeba castellanii str. Neff	14920320
ACA1_269780	CDS	ACA1_269780	NW_004457532.1	1038755	1041378	R	encoded by transcript ACA1_269780A; uncharacterized protein	complement(join(1038755..1039830,1039938..1039998,1040154..1040247,1040520..1040671,1040836..1040976,1041074..1041137,1041269..1041378))	Acanthamoeba castellanii str. Neff	14920321
ACA1_269790	CDS	ACA1_269790	NW_004457532.1	1042970	1045922	R	encoded by transcript ACA1_269790A; uncharacterized protein	complement(join(1042970..1043096,1043218..1043333,1043446..1043637,1043729..1043808,1043889..1043981,1044088..1044161,1044266..1044354,1044456..1044609,1044775..1044873,1044996..1045023,1045119..1045173,1045282..1045374,1045581..1045922))	Acanthamoeba castellanii str. Neff	14920322
ACA1_269800	CDS	ACA1_269800	NW_004457532.1	1046864	1048197	D	encoded by transcript ACA1_269800A; Fbox domain containing protein	join(1046864..1046983,1047130..1047429,1047481..1047753,1047832..1047911,1047997..1048069,1048093..1048197)	Acanthamoeba castellanii str. Neff	14920323
ACA1_269810	CDS	ACA1_269810	NW_004457532.1	1048401	1049394	R	encoded by transcript ACA1_269810A; uncharacterized protein	complement(join(1048401..1048580,1048666..1048773,1049053..1049394))	Acanthamoeba castellanii str. Neff	14920324
ACA1_269820	CDS	ACA1_269820	NW_004457532.1	1049908	1050750	D	encoded by transcript ACA1_269820A; uncharacterized protein	1049908..1050750	Acanthamoeba castellanii str. Neff	14920325
ACA1_269830	CDS	ACA1_269830	NW_004457532.1	1051255	1056803	D	encoded by transcript ACA1_269830A; AMPbinding enzyme domain containing protein	join(1051255..1051445,1051586..1051736,1051851..1051956,1052070..1052278,1052362..1052454,1052625..1052786,1052893..1052957,1053103..1053244,1053311..1053449,1053551..1053650,1053768..1053926,1053975..1054263,1054370..1054650,1054745..1054923,1055016..1055108,1055208..1055230,1055454..1055598,1055664..1055856,1055953..1056235,1056324..1056579,1056709..1056803)	Acanthamoeba castellanii str. Neff	14920326
ACA1_270160	CDS	ACA1_270160	NW_004457532.1	1065748	1066691	R	encoded by transcript ACA1_270160A; fascin subfamily protein	complement(join(1065748..1066194,1066269..1066346,1066512..1066691))	Acanthamoeba castellanii str. Neff	14920329
ACA1_270170	CDS	ACA1_270170	NW_004457532.1	1066934	1068889	R	encoded by transcript ACA1_270170A; von Willebrand factor type A domain containing protein	complement(join(1066934..1067660,1067730..1068058,1068320..1068889))	Acanthamoeba castellanii str. Neff	14920330
ACA1_270180	CDS	ACA1_270180	NW_004457532.1	1069137	1071670	R	encoded by transcript ACA1_270180A; mannosyltransferase	complement(join(1069137..1069322,1069402..1069477,1069580..1069694,1069770..1069880,1070012..1070158,1070238..1070394,1070487..1070553,1070689..1070832,1070939..1071033,1071109..1071223,1071330..1071402,1071481..1071670))	Acanthamoeba castellanii str. Neff	14920331
ACA1_270190	CDS	ACA1_270190	NW_004457532.1	1073568	1075257	R	encoded by transcript ACA1_270190A; uncharacterized protein	complement(join(1073568..1074224,1074271..1075257))	Acanthamoeba castellanii str. Neff	14920332
ACA1_270200	CDS	ACA1_270200	NW_004457532.1	1076032	1078709	R	encoded by transcript ACA1_270200A; FYVE zinc finger domain containing protein	complement(join(1076032..1076205,1076300..1076475,1076594..1076690,1076776..1076880,1076968..1077138,1077316..1077393,1077428..1077559,1077648..1077763,1077888..1078175,1078261..1078425,1078508..1078709))	Acanthamoeba castellanii str. Neff	14920333
ACA1_270210	CDS	ACA1_270210	NW_004457532.1	1078855	1079317	R	encoded by transcript ACA1_270210A; uncharacterized protein	complement(join(1078855..1079151,1079216..1079317))	Acanthamoeba castellanii str. Neff	14920334
ACA1_270220	CDS	ACA1_270220	NW_004457532.1	1079459	1080240	R	encoded by transcript ACA1_270220A; Endonuclease/Exonuclease/phosphatase family protein	complement(join(1079459..1079632,1079709..1079801,1079956..1080065,1080144..1080240))	Acanthamoeba castellanii str. Neff	14920335
ACA1_270230	CDS	ACA1_270230	NW_004457532.1	1080587	1085106	D	encoded by transcript ACA1_270230A; gelatinase b, putative	join(1080587..1080737,1080824..1081384,1081462..1081989,1082088..1082289,1082341..1083185,1083200..1083708,1083740..1083905,1083995..1084072,1084166..1085106)	Acanthamoeba castellanii str. Neff	14920336
ACA1_270240	CDS	ACA1_270240	NW_004457532.1	1085321	1087577	R	encoded by transcript ACA1_270240A; FAD dependent oxidoreductase domain containing protein	complement(join(1085321..1085408,1085521..1085654,1085718..1085833,1085918..1086064,1086154..1086262,1086323..1086482,1086547..1086621,1086710..1086786,1086895..1086961,1087065..1087180,1087216..1087314,1087410..1087509,1087555..1087577))	Acanthamoeba castellanii str. Neff	14920337
ACA1_270250	CDS	ACA1_270250	NW_004457532.1	1087721	1089845	R	encoded by transcript ACA1_270250A; adenylosuccinate lyase, putative	complement(join(1087721..1087901,1087977..1088339,1088414..1088502,1088600..1088733,1088826..1088998,1089162..1089340,1089469..1089621,1089729..1089845))	Acanthamoeba castellanii str. Neff	14920338
ACA1_270260	CDS	ACA1_270260	NW_004457532.1	1090170	1091043	R	encoded by transcript ACA1_270260A; uncharacterized protein	complement(join(1090170..1090352,1090456..1090581,1090690..1091043))	Acanthamoeba castellanii str. Neff	14920339
ACA1_270270	CDS	ACA1_270270	NW_004457532.1	1091377	1098093	D	encoded by transcript ACA1_270270A; phospholipase, patatin family protein	join(1091377..1091934,1092169..1092306,1092426..1092506,1092639..1092732,1092819..1092904,1093053..1093190,1093273..1094196,1094274..1094308,1094433..1094501,1094591..1094670,1094758..1094859,1094920..1095193,1095303..1095394,1095532..1095677,1095760..1095872,1095957..1095994,1096163..1096182,1096323..1096448,1096590..1096745,1096857..1097510,1097656..1098093)	Acanthamoeba castellanii str. Neff	14920340
ACA1_270280	CDS	ACA1_270280	NW_004457532.1	1099136	1099981	D	encoded by transcript ACA1_270280A; carbohydrate binding domain cbm49 protein	1099136..1099981	Acanthamoeba castellanii str. Neff	14920341
ACA1_270300	CDS	ACA1_270300	NW_004457532.1	1105549	1106575	D	encoded by transcript ACA1_270300A; uncharacterized protein	join(1105549..1105788,1105911..1106021,1106131..1106236,1106325..1106575)	Acanthamoeba castellanii str. Neff	14920343
ACA1_270310	CDS	ACA1_270310	NW_004457532.1	1106701	1108203	R	encoded by transcript ACA1_270310A; galactosyl transferase GMA12/MNN10 family protein	complement(join(1106701..1106895,1106983..1107134,1107247..1107320,1107433..1107482,1107493..1107693,1107823..1108022,1108116..1108203))	Acanthamoeba castellanii str. Neff	14920344
ACA1_270320	CDS	ACA1_270320	NW_004457532.1	1108646	1112165	D	encoded by transcript ACA1_270320A; histidine triad domain containing protein	join(1108646..1108759,1109043..1109224,1109351..1109481,1109492..1109553,1109800..1110035,1110082..1110170,1110331..1110341,1110554..1110771,1110880..1111070,1111166..1111239,1111354..1111472,1111561..1111633,1111759..1111796,1111876..1111951,1112052..1112165)	Acanthamoeba castellanii str. Neff	14920345
ACA1_270330	CDS	ACA1_270330	NW_004457532.1	1112759	1114435	R	encoded by transcript ACA1_270330A; uncharacterized protein	complement(join(1112759..1113474,1113556..1114435))	Acanthamoeba castellanii str. Neff	14920346
ACA1_270340	CDS	ACA1_270340	NW_004457532.1	1114777	1115244	D	encoded by transcript ACA1_270340A; uncharacterized protein	1114777..1115244	Acanthamoeba castellanii str. Neff	14920347
ACA1_270350	CDS	ACA1_270350	NW_004457532.1	1115347	1116948	R	encoded by transcript ACA1_270350A; papain family cysteine protease containing protein	complement(join(1115347..1115586,1115776..1115895,1115978..1116098,1116180..1116405,1116498..1116948))	Acanthamoeba castellanii str. Neff	14920348
ACA1_270360	CDS	ACA1_270360	NW_004457532.1	1117206	1122040	R	encoded by transcript ACA1_270360A; phosphoribosylamine-glycine ligase	complement(join(1117206..1117318,1117409..1117630,1117724..1117847,1117922..1118027,1118111..1118268,1118372..1118448,1118523..1118601,1118695..1118786,1118914..1119022,1119095..1119219,1119327..1119446,1119534..1119956,1120040..1120250,1120341..1120612,1120692..1120845,1120944..1120999,1121058..1121148,1121201..1121347,1121434..1121558,1121628..1121792,1121914..1122040))	Acanthamoeba castellanii str. Neff	14920349
ACA1_270370	CDS	ACA1_270370	NW_004457532.1	1122813	1123950	D	encoded by transcript ACA1_270370A; uncharacterized protein	join(1122813..1122894,1122987..1123104,1123266..1123368,1123472..1123539,1123622..1123786,1123938..1123950)	Acanthamoeba castellanii str. Neff	14920350
ACA1_270480	CDS	ACA1_270480	NW_004457532.1	1128376	1128844	R	encoded by transcript ACA1_270480A; uncharacterized protein	complement(join(1128376..1128419,1128470..1128570,1128620..1128688,1128798..1128844))	Acanthamoeba castellanii str. Neff	14920351
ACA1_270490	CDS	ACA1_270490	NW_004457532.1	1129347	1130033	R	encoded by transcript ACA1_270490A; uncharacterized protein	complement(1129347..1130033)	Acanthamoeba castellanii str. Neff	14920352
ACA1_270500	CDS	ACA1_270500	NW_004457532.1	1130235	1136431	R	encoded by transcript ACA1_270500A; PX domain containing protein	complement(join(1130235..1130885,1130980..1131045,1131140..1131232,1131364..1131447,1131576..1131683,1131781..1131876,1134122..1134603,1134888..1135031,1135279..1135339,1135444..1135549,1136310..1136431))	Acanthamoeba castellanii str. Neff	14920353
ACA1_270610	CDS	ACA1_270610	NW_004457532.1	1136972	1140265	R	encoded by transcript ACA1_270610A; uncharacterized protein	complement(join(1136972..1137343,1137449..1137516,1137623..1137983,1138141..1138549,1138645..1139153,1139269..1139384,1139474..1139588,1139664..1139694,1139761..1139834,1139910..1139987,1140046..1140121,1140216..1140265))	Acanthamoeba castellanii str. Neff	14920354
ACA1_270620	CDS	ACA1_270620	NW_004457532.1	1140794	1145115	R	encoded by transcript ACA1_270620A; hydrolase, alpha/beta fold domain containing protein	complement(join(1140794..1140977,1141042..1141294,1141367..1141446,1141536..1141660,1141743..1141858,1141950..1142040,1142132..1142283,1142357..1142505,1142592..1142795,1142888..1142976,1143064..1143170,1143306..1143387,1143517..1143646,1143727..1143810,1143891..1143983,1144072..1144162,1144249..1144334,1144419..1144542,1144641..1144788,1144864..1144945,1145012..1145115))	Acanthamoeba castellanii str. Neff	14920355
ACA1_270630	CDS	ACA1_270630	NW_004457532.1	1145193	1145636	R	encoded by transcript ACA1_270630A; uncharacterized protein	complement(1145193..1145636)	Acanthamoeba castellanii str. Neff	14920356
ACA1_270640	CDS	ACA1_270640	NW_004457532.1	1145710	1147041	R	encoded by transcript ACA1_270640A; uncharacterized protein	complement(join(1145710..1145867,1145961..1146076,1146179..1146367,1146446..1146543,1146664..1147041))	Acanthamoeba castellanii str. Neff	14920357
ACA1_270650	CDS	ACA1_270650	NW_004457532.1	1147737	1148138	D	encoded by transcript ACA1_270650A; uncharacterized protein	join(1147737..1147915,1148024..1148138)	Acanthamoeba castellanii str. Neff	14920358
ACA1_270660	CDS	ACA1_270660	NW_004457532.1	1148364	1149086	R	encoded by transcript ACA1_270660A; CCAATbinding transcription factor (CBF-B/NF-YA) subunit B domain containing protein	complement(join(1148364..1148461,1148528..1148624,1148709..1148888,1148952..1149086))	Acanthamoeba castellanii str. Neff	14920359
ACA1_270670	CDS	ACA1_270670	NW_004457532.1	1149733	1150185	R	encoded by transcript ACA1_270670A; uncharacterized protein	complement(1149733..1150185)	Acanthamoeba castellanii str. Neff	14920360
ACA1_270690	CDS	ACA1_270690	NW_004457532.1	1154623	1157233	D	encoded by transcript ACA1_270690A; lysine-tRNA ligase	join(1154623..1154696,1154796..1155256,1155384..1155546,1155639..1155778,1155853..1156125,1156223..1156372,1156447..1156618,1156706..1156844,1156940..1157075,1157107..1157126,1157165..1157233)	Acanthamoeba castellanii str. Neff	14920362
ACA1_270700	CDS	ACA1_270700	NW_004457532.1	1157670	1161500	D	encoded by transcript ACA1_270700A; GTPase-activator protein for Ras family GTPase	join(1157670..1157793,1157896..1157934,1158059..1158161,1158286..1158406,1158554..1158677,1158771..1158810,1158914..1159015,1159083..1159131,1159216..1159324,1159439..1159527,1159604..1159648,1159766..1159919,1159996..1160254,1160356..1160459,1160548..1160598,1160673..1160744,1160826..1160920,1161161..1161229,1161320..1161386,1161484..1161500)	Acanthamoeba castellanii str. Neff	14920363
ACA1_270810	CDS	ACA1_270810	NW_004457532.1	1162208	1163390	D	encoded by transcript ACA1_270810A; C2 domain containing protein	join(1162208..1162318,1162453..1162552,1162634..1162728,1162822..1162947,1163030..1163098,1163194..1163275,1163374..1163390)	Acanthamoeba castellanii str. Neff	14920364
ACA1_270930	CDS	ACA1_270930	NW_004457532.1	1170674	1171099	D	encoded by transcript ACA1_270930A; PLAC8 family protein	join(1170674..1170781,1170818..1171099)	Acanthamoeba castellanii str. Neff	14920366
ACA1_270940	CDS	ACA1_270940	NW_004457532.1	1171316	1172405	R	encoded by transcript ACA1_270940A; uncharacterized protein	complement(join(1171316..1171557,1171655..1172125,1172192..1172405))	Acanthamoeba castellanii str. Neff	14920367
ACA1_270950	CDS	ACA1_270950	NW_004457532.1	1172556	1176948	R	encoded by transcript ACA1_270950A; BTB/POZ domain containing protein	complement(join(<1172556..1173164,1173298..1173390,1173503..1173610,1173690..1173768,1173864..1174011,1174107..1174453,1174511..1174702,1174769..1174907,1176223..1176442,1176549..1176622,1176744..1176810,1176861..>1176948))	Acanthamoeba castellanii str. Neff	14920368
ACA1_031780	CDS	ACA1_031780	NW_004457530.1	361	2118	R	encoded by transcript ACA1_031780A; nuclear RNase Z, putative	complement(join(361..628,718..804,905..978,1098..1238,1326..1398,1475..1566,1639..1694,1845..1935,2029..2118))	Acanthamoeba castellanii str. Neff	14919981
ACA1_031790	CDS	ACA1_031790	NW_004457530.1	2573	4964	D	encoded by transcript ACA1_031790A; RapGAP/RanGAP domain containing protein	join(2573..2746,2769..2850,3011..3111,3200..3273,3411..3510,3591..3687,3810..3908,4005..4130,4244..4321,4446..4512,4592..4698,4831..4964)	Acanthamoeba castellanii str. Neff	14919968
ACA1_031800	CDS	ACA1_031800	NW_004457530.1	5294	8657	D	encoded by transcript ACA1_031800A; von Willebrand factor type A domain containing protein	join(5294..5306,5475..5558,5623..5716,5986..6125,6223..6323,6434..6661,6815..6922,7062..7231,7325..7367,7457..7565,7674..7750,7826..7893,7991..8657)	Acanthamoeba castellanii str. Neff	14919969
ACA1_031810	CDS	ACA1_031810	NW_004457530.1	9200	9864	D	encoded by transcript ACA1_031810A; uncharacterized protein	join(9200..9379,9445..9558,9580..9864)	Acanthamoeba castellanii str. Neff	14919959
ACA1_031820	CDS	ACA1_031820	NW_004457530.1	10464	14352	D	encoded by transcript ACA1_031820A; SH3 domain containing protein	join(10464..10475,10643..10807,10923..11141,11213..11300,11397..11961,12042..14352)	Acanthamoeba castellanii str. Neff	14919960
ACA1_031830	CDS	ACA1_031830	NW_004457530.1	14530	16008	D	encoded by transcript ACA1_031830A; uncharacterized protein	join(14530..14683,14780..14943,15025..15184,15291..15515,15602..15712,15926..16008)	Acanthamoeba castellanii str. Neff	14919961
ACA1_031840	CDS	ACA1_031840	NW_004457530.1	18101	18641	R	encoded by transcript ACA1_031840A; uncharacterized protein	complement(join(18101..18119,18146..18374,18391..18568,18579..18641))	Acanthamoeba castellanii str. Neff	14919962
ACA1_031850	CDS	ACA1_031850	NW_004457530.1	19572	22153	R	encoded by transcript ACA1_031850A; Proteintyrosine phosphatase	complement(join(19572..19619,19759..19968,20039..20147,20236..20329,20467..20561,20620..20699,20798..20867,21041..21117,21278..22153))	Acanthamoeba castellanii str. Neff	14919963
ACA1_031860	CDS	ACA1_031860	NW_004457530.1	22501	24088	D	encoded by transcript ACA1_031860A; slime mold cyclic amp receptor protein	join(22501..22604,22681..22804,22913..23015,23096..23453,23584..23697,23854..24088)	Acanthamoeba castellanii str. Neff	14919964
ACA1_031870	CDS	ACA1_031870	NW_004457530.1	24244	25415	R	encoded by transcript ACA1_031870A; tyrosine specific protein phosphatase, putative	complement(join(24244..24346,24465..24541,24632..24675,24773..24830,24949..25004,25152..25258,25339..25415))	Acanthamoeba castellanii str. Neff	14919965
ACA1_031880	CDS	ACA1_031880	NW_004457530.1	26132	26932	R	encoded by transcript ACA1_031880A; uncharacterized protein	complement(26132..26932)	Acanthamoeba castellanii str. Neff	14919966
ACA1_031890	CDS	ACA1_031890	NW_004457530.1	27548	32923	D	encoded by transcript ACA1_031890A; serine/threonine kinase	join(27548..30484,30677..32923)	Acanthamoeba castellanii str. Neff	14919967
ACA1_031900	CDS	ACA1_031900	NW_004457530.1	32998	34674	R	encoded by transcript ACA1_031900A; uncharacterized protein	complement(join(32998..33624,33768..33904,33971..34124,34189..34568,34635..34674))	Acanthamoeba castellanii str. Neff	14919970
ACA1_031910	CDS	ACA1_031910	NW_004457530.1	34913	35653	R	encoded by transcript ACA1_031910A; uncharacterized protein	complement(join(34913..35061,35163..35262,35395..35514,35618..35653))	Acanthamoeba castellanii str. Neff	14919971
ACA1_031920	CDS	ACA1_031920	NW_004457530.1	35912	37057	R	encoded by transcript ACA1_031920A; Fbox domain containing protein	complement(join(35912..35975,36077..36133,36216..36341,36422..36654,36761..36883,36959..37057))	Acanthamoeba castellanii str. Neff	14919972
ACA1_031930	CDS	ACA1_031930	NW_004457530.1	37156	38035	D	encoded by transcript ACA1_031930A; uncharacterized protein	join(37156..37295,37445..37533,37628..37713,37813..37918,38010..38035)	Acanthamoeba castellanii str. Neff	14919973
ACA1_031940	CDS	ACA1_031940	NW_004457530.1	38400	39126	D	encoded by transcript ACA1_031940A; uncharacterized protein	join(38400..38606,38686..38805,38875..39126)	Acanthamoeba castellanii str. Neff	14919974
ACA1_031950	CDS	ACA1_031950	NW_004457530.1	39604	41106	D	encoded by transcript ACA1_031950A; CBS domain containing protein	join(39604..39720,39830..39898,39980..40094,40181..40271,40346..40451,40539..40636,40714..40789,40867..41106)	Acanthamoeba castellanii str. Neff	14919975
ACA1_031960	CDS	ACA1_031960	NW_004457530.1	41450	42723	D	encoded by transcript ACA1_031960A; inositol oxygenase 1, putative	join(41450..41688,41768..41818,41887..42151,42225..42352,42429..42516,42607..42723)	Acanthamoeba castellanii str. Neff	14919976
ACA1_031970	CDS	ACA1_031970	NW_004457530.1	42879	44950	D	encoded by transcript ACA1_031970A; actin subfamily protein	join(42879..43174,43389..43408,43460..43519,43799..43935,44066..44294,44544..44625,44709..44794,44925..44950)	Acanthamoeba castellanii str. Neff	14919977
ACA1_031980	CDS	ACA1_031980	NW_004457530.1	45046	45733	R	encoded by transcript ACA1_031980A; uncharacterized protein	complement(join(45046..45365,45463..45510,45577..45733))	Acanthamoeba castellanii str. Neff	14919978
ACA1_031990	CDS	ACA1_031990	NW_004457530.1	45828	49565	R	encoded by transcript ACA1_031990A; uncharacterized protein	complement(join(45828..46646,46816..46898,46993..47481,47602..47670,47746..47847,47926..48038,48471..48562,48758..48837,48981..49090,49181..49265,49460..49565))	Acanthamoeba castellanii str. Neff	14919979
ACA1_032000	CDS	ACA1_032000	NW_004457530.1	50253	53264	D	encoded by transcript ACA1_032000A; uncharacterized protein	join(50253..51018,51141..51230,51327..51414,51501..51851,51964..52077,52155..52635,52719..52797,52887..53050,53166..53264)	Acanthamoeba castellanii str. Neff	14919980
ACA1_007510	CDS	ACA1_007510	NW_004457528.1	3156	3538	D	encoded by transcript ACA1_007510A; 5'3' exoribonuclease 2, putative	join(3156..3243,3317..3466,3531..3538)	Acanthamoeba castellanii str. Neff	14919958
ACA1_007620	CDS	ACA1_007620	NW_004457528.1	9844	10803	D	encoded by transcript ACA1_007620A; uncharacterized protein	join(9844..9982,10163..10803)	Acanthamoeba castellanii str. Neff	14919957
ACA1_335880	CDS	ACA1_335880	NW_004457526.1	82	485	R	encoded by transcript ACA1_335880A; uncharacterized protein	complement(join(<82..186,336..485))	Acanthamoeba castellanii str. Neff	14919930
ACA1_335890	CDS	ACA1_335890	NW_004457526.1	615	2574	R	encoded by transcript ACA1_335890A; uncharacterized protein	complement(join(615..803,914..1039,1111..1169,1266..1315,1406..1592,1690..1823,1927..1996,2078..2148,2243..2290,2388..2478,2547..2574))	Acanthamoeba castellanii str. Neff	14919931
ACA1_335900	CDS	ACA1_335900	NW_004457526.1	2869	5116	D	encoded by transcript ACA1_335900A; uncharacterized protein	join(2869..3078,3171..3222,3331..3415,3509..3575,3709..3880,4031..4084,4213..4466,4546..4629,4754..5116)	Acanthamoeba castellanii str. Neff	14919932
ACA1_335910	CDS	ACA1_335910	NW_004457526.1	5362	6011	D	encoded by transcript ACA1_335910A; MxaD protein	join(5362..5475,5597..5755,5850..6011)	Acanthamoeba castellanii str. Neff	14919933
ACA1_335920	CDS	ACA1_335920	NW_004457526.1	6333	7022	R	encoded by transcript ACA1_335920A; polyubiquitin, putative	complement(6333..7022)	Acanthamoeba castellanii str. Neff	14919934
ACA1_335930	CDS	ACA1_335930	NW_004457526.1	7344	7746	D	encoded by transcript ACA1_335930A; uncharacterized protein	join(7344..7425,7525..7575,7685..7746)	Acanthamoeba castellanii str. Neff	14919935
ACA1_335940	CDS	ACA1_335940	NW_004457526.1	8082	10805	R	encoded by transcript ACA1_335940A; RNA recognition motif domain containing protein	complement(join(8082..8135,8207..8321,8410..8675,8806..8982,9121..9194,9296..9509,9646..9780,9871..10005,10109..10605,10790..10805))	Acanthamoeba castellanii str. Neff	14919936
ACA1_335950	CDS	ACA1_335950	NW_004457526.1	11177	13294	R	encoded by transcript ACA1_335950A; uncharacterized protein	complement(11177..13294)	Acanthamoeba castellanii str. Neff	14919937
ACA1_335960	CDS	ACA1_335960	NW_004457526.1	13309	14086	R	encoded by transcript ACA1_335960A; uncharacterized protein	complement(join(13309..13435,13776..13862,13944..14086))	Acanthamoeba castellanii str. Neff	14919938
ACA1_335970	CDS	ACA1_335970	NW_004457526.1	14347	16394	R	encoded by transcript ACA1_335970A; ADPribosylglycohydrolase superfamily protein	complement(join(14347..14596,14690..14898,15058..15198,15290..15375,15460..15619,15728..15821,15954..16065,16181..16394))	Acanthamoeba castellanii str. Neff	14919939
ACA1_335980	CDS	ACA1_335980	NW_004457526.1	16715	18342	R	encoded by transcript ACA1_335980A; uncharacterized protein	complement(join(16715..17041,17265..17406,17503..17627,17721..17932,18156..18342))	Acanthamoeba castellanii str. Neff	14919940
ACA1_335990	CDS	ACA1_335990	NW_004457526.1	18462	20975	D	encoded by transcript ACA1_335990A; uncharacterized protein	join(18462..18479,18623..18738,18844..19001,19152..19244,19710..19739,19764..19838,19970..20040,20151..20241,20365..20456,20620..20723,20870..20975)	Acanthamoeba castellanii str. Neff	14919941
ACA1_336100	CDS	ACA1_336100	NW_004457526.1	24209	25100	R	encoded by transcript ACA1_336100A; ribosomal protein L12, putative	complement(join(24209..24490,24580..24873,24959..24993,25094..25100))	Acanthamoeba castellanii str. Neff	14919942
ACA1_336110	CDS	ACA1_336110	NW_004457526.1	25267	26847	R	encoded by transcript ACA1_336110A; zinc finger, C3HC4 type (RING finger) domain containing protein	complement(join(25267..25719,25911..26010,26139..26221,26282..26373,26478..26564,26688..26847))	Acanthamoeba castellanii str. Neff	14919943
ACA1_336120	CDS	ACA1_336120	NW_004457526.1	27222	29651	D	encoded by transcript ACA1_336120A; Ankyrin repeatcontaining protein	join(27222..27863,27963..29651)	Acanthamoeba castellanii str. Neff	14919944
ACA1_336130	CDS	ACA1_336130	NW_004457526.1	30002	33782	R	encoded by transcript ACA1_336130A; Filamin repeat domain containing protein	complement(join(30002..30135,30261..30413,30744..31919,32009..32160,32405..32756,32834..32939,33038..33144,33219..33361,33455..33581,33692..33782))	Acanthamoeba castellanii str. Neff	14919945
ACA1_336140	CDS	ACA1_336140	NW_004457526.1	34295	35623	R	encoded by transcript ACA1_336140A; thioesterase family domain containing protein	complement(join(34295..34567,34637..34752,34833..35381,35521..35623))	Acanthamoeba castellanii str. Neff	14919946
ACA1_336150	CDS	ACA1_336150	NW_004457526.1	36005	42349	D	encoded by transcript ACA1_336150A; protein kinase domain containing protein	join(36005..36168,36360..36418,36550..36661,36743..36856,37053..37845,37958..38026,38124..38247,38353..38441,38545..38642,38731..38845,38946..39011,39096..39179,39325..39483,39586..39680,39784..40456,40532..40660,40816..40938,41036..41074,41272..41433,41518..41640,41703..41804,41879..42043,42155..42349)	Acanthamoeba castellanii str. Neff	14919947
ACA1_336160	CDS	ACA1_336160	NW_004457526.1	43660	48792	D	encoded by transcript ACA1_336160A; receptor protein-tyrosine kinase	join(43660..43665,43729..43929,44035..44084,44180..44334,44426..44557,44671..44891,44977..45461,45540..45695,47963..48114,48203..48273,48385..48468,48557..48614,48704..>48792)	Acanthamoeba castellanii str. Neff	14919948
ACA1_336370	CDS	ACA1_336370	NW_004457526.1	52148	52882	D	encoded by transcript ACA1_336370A; actin-1, putative	52148..52882	Acanthamoeba castellanii str. Neff	14919949
ACA1_336380	CDS	ACA1_336380	NW_004457526.1	53672	58245	R	encoded by transcript ACA1_336380A; RasGEF domain containing protein	complement(join(53672..54200,54304..54492,54568..54829,54906..55110,55202..55372,55491..55583,55698..56011,56080..56143,56248..56343,56494..56732,56833..56958,57123..57281,57600..58245))	Acanthamoeba castellanii str. Neff	14919950
ACA1_336390	CDS	ACA1_336390	NW_004457526.1	59034	67609	D	encoded by transcript ACA1_336390A; MON2 family protein	join(59034..59114,59277..59349,59468..59583,59740..60004,60113..60234,60349..60498,60597..60716,60847..60968,61103..61267,61358..61422,61536..61622,61701..61903,61996..62171,62259..62409,62525..62681,62785..62880,62980..63143,63198..63284,63347..63463,63555..63794,63870..64058,64153..64282,64350..64494,64600..64668,64777..64927,65021..65124,65213..65318,65414..65530,65629..65778,65864..66055,66163..66541,66639..66829,66965..67045,67240..67383,67463..67609)	Acanthamoeba castellanii str. Neff	14919951
ACA1_336400	CDS	ACA1_336400	NW_004457526.1	67968	69302	D	encoded by transcript ACA1_336400A; BTB/POZ domain containing protein	67968..69302	Acanthamoeba castellanii str. Neff	14919952
ACA1_336410	CDS	ACA1_336410	NW_004457526.1	69559	71652	D	encoded by transcript ACA1_336410A; uncharacterized protein	join(69559..69748,70014..70145,70231..70353,70480..70611,70700..70825,70930..71006,71128..71260,71378..71652)	Acanthamoeba castellanii str. Neff	14919953
ACA1_336420	CDS	ACA1_336420	NW_004457526.1	71702	73018	R	encoded by transcript ACA1_336420A; BTB/POZ domain containing protein	complement(71702..73018)	Acanthamoeba castellanii str. Neff	14919954
ACA1_336430	CDS	ACA1_336430	NW_004457526.1	73316	75573	R	encoded by transcript ACA1_336430A; cysteine protease, putative	complement(join(73316..73444,73559..73640,73738..73870,73980..74159,74240..74361,74501..74628,74752..74795,74883..75326,75531..75573))	Acanthamoeba castellanii str. Neff	14919955
ACA1_336440	CDS	ACA1_336440	NW_004457526.1	76889	78432	R	encoded by transcript ACA1_336440A; uncharacterized protein	complement(join(76889..77037,77149..77188,77305..77399,77540..77620,77704..77740,78085..78250,78335..>78432))	Acanthamoeba castellanii str. Neff	14919956
ACA1_301220	CDS	ACA1_301220	NW_004457524.1	258	4064	R	encoded by transcript ACA1_301220A; uncharacterized protein	complement(join(258..266,352..518,601..820,917..1000,1084..1188,1299..1411,1515..1613,1734..1792,1881..1979,2080..2241,2335..2429,2553..2818,2925..3046,3170..3309,3414..3548,3663..3808,3877..3907,3990..4064))	Acanthamoeba castellanii str. Neff	14919929
ACA1_301230	CDS	ACA1_301230	NW_004457524.1	4196	6862	R	encoded by transcript ACA1_301230A; uncharacterized protein	complement(join(4196..4291,4363..4448,4540..4634,4712..4809,4873..5071,5170..5237,5385..5519,5606..5743,5825..5881,6003..6306,6342..6401,6421..6647,6731..6862))	Acanthamoeba castellanii str. Neff	14919926
ACA1_301240	CDS	ACA1_301240	NW_004457524.1	6985	7817	D	encoded by transcript ACA1_301240A; universal stress domain containing protein	join(6985..7149,7237..7377,7536..7657,7748..7817)	Acanthamoeba castellanii str. Neff	14919925
ACA1_301250	CDS	ACA1_301250	NW_004457524.1	8029	9585	R	encoded by transcript ACA1_301250A; RAB36 member RAS oncogene family protein	complement(join(8029..8096,8197..8349,8434..8512,8595..8645,8736..8880,9001..9091,9150..9238,9356..9415,9500..9585))	Acanthamoeba castellanii str. Neff	14919927
ACA1_301260	CDS	ACA1_301260	NW_004457524.1	9900	11916	R	encoded by transcript ACA1_301260A; WD repeatcontaining protein 1, putative	complement(join(9900..10439,10522..10839,10942..11092,11201..11338,11433..11555,11665..11738,11845..11916))	Acanthamoeba castellanii str. Neff	14919928
ACA1_323310	CDS	ACA1_323310	NW_004457522.1	444	2038	D	encoded by transcript ACA1_323310A; uncharacterized protein	join(444..572,653..853,933..988,1066..1691,1772..1842,1928..2038)	Acanthamoeba castellanii str. Neff	14919924
ACA1_323320	CDS	ACA1_323320	NW_004457522.1	2099	3626	R	encoded by transcript ACA1_323320A; Gpatch domain containing protein	complement(join(2099..2626,2687..2959,3045..3137,3213..3311,3398..3473,3562..3626))	Acanthamoeba castellanii str. Neff	14919908
ACA1_323330	CDS	ACA1_323330	NW_004457522.1	3763	7279	R	encoded by transcript ACA1_323330A; cullin family protein	complement(join(3763..3861,3940..4038,4103..4156,4220..4383,4466..4574,4647..4760,4821..4877,4953..5095,5167..5225,5303..5424,5488..5795,6011..6074,6326..6454,6527..6604,6668..6855,6924..6964,7082..7138,7209..7279))	Acanthamoeba castellanii str. Neff	14919917
ACA1_323340	CDS	ACA1_323340	NW_004457522.1	7703	8388	R	encoded by transcript ACA1_323340A; uncharacterized protein	complement(join(7703..7910,7976..8059,8112..8226,8295..8388))	Acanthamoeba castellanii str. Neff	14919914
ACA1_323350	CDS	ACA1_323350	NW_004457522.1	8635	10480	R	encoded by transcript ACA1_323350A; uncharacterized protein	complement(join(8635..8732,8808..8912,8983..9049,9117..9197,9255..9386,9450..9563,9632..9695,9775..9857,9930..10099,10203..10312,10410..10480))	Acanthamoeba castellanii str. Neff	14919915
ACA1_323360	CDS	ACA1_323360	NW_004457522.1	10682	11852	R	encoded by transcript ACA1_323360A; eukaryotic translation initiation factor SUI1 family protein	complement(join(10682..10732,10803..10856,10934..11022,11111..11198,11285..11367,11462..11593,11672..11740,11816..11852))	Acanthamoeba castellanii str. Neff	14919916
ACA1_323370	CDS	ACA1_323370	NW_004457522.1	11968	12885	R	encoded by transcript ACA1_323370A; Hsp20/alpha crystallin superfamily protein	complement(join(11968..11999,12066..12129,12201..12393,12456..12569,12639..12780,12837..12885))	Acanthamoeba castellanii str. Neff	14919923
ACA1_323380	CDS	ACA1_323380	NW_004457522.1	13688	15231	R	encoded by transcript ACA1_323380A; ADPribosylglycohydrolase superfamily protein	complement(join(13688..13754,13827..13936,14006..14088,14178..14296,14361..14689,14744..14794,14959..15067,15152..15231))	Acanthamoeba castellanii str. Neff	14919902
ACA1_323390	CDS	ACA1_323390	NW_004457522.1	15283	16189	R	encoded by transcript ACA1_323390A; uncharacterized protein	complement(join(15283..15417,15522..15628,15724..15806,15939..16189))	Acanthamoeba castellanii str. Neff	14919903
ACA1_323400	CDS	ACA1_323400	NW_004457522.1	16248	18543	R	encoded by transcript ACA1_323400A; transporter, major facilitator subfamily protein	complement(join(16248..16375,16511..16675,16766..16831,16899..17049,17119..17247,17321..17481,17563..17713,17798..17902,17991..18106,18219..18543))	Acanthamoeba castellanii str. Neff	14919904
ACA1_323410	CDS	ACA1_323410	NW_004457522.1	18774	19521	R	encoded by transcript ACA1_323410A; uncharacterized protein	complement(join(18774..18961,19037..19128,19199..19521))	Acanthamoeba castellanii str. Neff	14919905
ACA1_323420	CDS	ACA1_323420	NW_004457522.1	19802	20785	D	encoded by transcript ACA1_323420A; uncharacterized protein	join(19802..19946,20052..20152,20284..20446,20527..20606,20699..20785)	Acanthamoeba castellanii str. Neff	14919906
ACA1_323430	CDS	ACA1_323430	NW_004457522.1	21033	22184	D	encoded by transcript ACA1_323430A; SnoaL family polyketide cyclase	join(21033..21120,21218..21313,21416..21543,21625..21742,21821..21892,21997..22184)	Acanthamoeba castellanii str. Neff	14919907
ACA1_323440	CDS	ACA1_323440	NW_004457522.1	22402	23382	D	encoded by transcript ACA1_323440A; uncharacterized protein	join(22402..22687,22856..23382)	Acanthamoeba castellanii str. Neff	14919909
ACA1_323450	CDS	ACA1_323450	NW_004457522.1	23568	23894	D	encoded by transcript ACA1_323450A; uncharacterized protein	23568..23894	Acanthamoeba castellanii str. Neff	14919910
ACA1_323460	CDS	ACA1_323460	NW_004457522.1	23993	26721	R	encoded by transcript ACA1_323460A; domain found in dishevelled, egl10, and pleckstrin domain containing protein	complement(join(23993..24859,25062..25142,25257..25331,25428..25523,25615..25660,25798..25874,25973..26130,26243..26366,26677..26721))	Acanthamoeba castellanii str. Neff	14919911
ACA1_323470	CDS	ACA1_323470	NW_004457522.1	26936	27825	R	encoded by transcript ACA1_323470A; uncharacterized protein	complement(join(26936..27123,27231..27825))	Acanthamoeba castellanii str. Neff	14919912
ACA1_323480	CDS	ACA1_323480	NW_004457522.1	28549	32486	D	encoded by transcript ACA1_323480A; dynamin gtpase	join(28549..28584,28754..28862,28970..29099,29192..29309,29383..29461,29547..29744,29840..29922,30008..30100,30182..30274,30347..30447,30513..30636,30707..30884,30961..31030,31565..31760,31823..31887,31963..32109,32170..32272,32370..32486)	Acanthamoeba castellanii str. Neff	14919913
ACA1_323490	CDS	ACA1_323490	NW_004457522.1	32842	36521	D	encoded by transcript ACA1_323490A; RhoGEF domain containing protein	join(32842..33474,33586..33696,33801..33851,33954..34055,34134..34241,34336..34410,34508..34615,34745..34801,34932..35062,35151..35250,35396..35456,35557..35666,35789..35894,35978..36325,36415..36521)	Acanthamoeba castellanii str. Neff	14919918
ACA1_323500	CDS	ACA1_323500	NW_004457522.1	36805	38584	D	encoded by transcript ACA1_323500A; P21Rho-binding domain containing protein	join(36805..36886,36956..37305,37339..37514,37594..37766,37853..38031,38110..38247,38343..38423,38495..38584)	Acanthamoeba castellanii str. Neff	14919919
ACA1_323510	CDS	ACA1_323510	NW_004457522.1	39112	39849	D	encoded by transcript ACA1_323510A; uncharacterized protein	join(39112..39259,39356..39849)	Acanthamoeba castellanii str. Neff	14919920
ACA1_323520	CDS	ACA1_323520	NW_004457522.1	39969	41710	R	encoded by transcript ACA1_323520A; inosineuridine preferring nucleoside hydrolase	complement(join(39969..40087,40161..40352,40389..40480,40594..40680,40752..40881,40968..41031,41118..41224,41299..41386,41443..41558,41572..41710))	Acanthamoeba castellanii str. Neff	14919921
ACA1_323530	CDS	ACA1_323530	NW_004457522.1	41861	43843	D	encoded by transcript ACA1_323530A; Fbox domain containing protein	join(41861..42176,42289..42737,42804..42919,42986..43087,43187..43592,43706..43843)	Acanthamoeba castellanii str. Neff	14919922
ACA1_232030	CDS	ACA1_232030	NW_004457518.1	215	1118	R	encoded by transcript ACA1_232030A; block of proliferation 1, putative	complement(join(<215..445,551..668,838..1118))	Acanthamoeba castellanii str. Neff	14919869
ACA1_232140	CDS	ACA1_232140	NW_004457518.1	7011	7513	D	encoded by transcript ACA1_232140A; uncharacterized protein	join(7011..7161,7235..7334,7474..>7513)	Acanthamoeba castellanii str. Neff	14919767
ACA1_232250	CDS	ACA1_232250	NW_004457518.1	8187	8486	R	encoded by transcript ACA1_232250A; CsbD family protein	complement(8187..8486)	Acanthamoeba castellanii str. Neff	14919870
ACA1_232260	CDS	ACA1_232260	NW_004457518.1	8816	11440	D	encoded by transcript ACA1_232260A; uncharacterized protein	join(8816..8922,9099..9186,9314..9428,9543..10010,10110..10337,10421..10468,10545..11440)	Acanthamoeba castellanii str. Neff	14919871
ACA1_232270	CDS	ACA1_232270	NW_004457518.1	11541	15775	D	encoded by transcript ACA1_232270A; elongation factor Tu GTP binding domain containing protein	join(11541..11582,11695..11964,12087..12144,12283..12423,12540..12640,12784..12877,12957..13066,13228..13268,13548..13880,14030..14078,14501..14541,14835..15176,15456..15582,15662..15775)	Acanthamoeba castellanii str. Neff	14919872
ACA1_232380	CDS	ACA1_232380	NW_004457518.1	15874	17034	R	encoded by transcript ACA1_232380A; thiazole biosynthesis protein ThiG, putative	complement(join(15874..16100,16232..16466,16532..16820,16940..17034))	Acanthamoeba castellanii str. Neff	14919873
ACA1_232390	CDS	ACA1_232390	NW_004457518.1	17924	18906	D	encoded by transcript ACA1_232390A; pyridoxine synthesis protein PDX2, putative	join(17924..18005,18097..18290,18377..18668,18761..18906)	Acanthamoeba castellanii str. Neff	14919874
ACA1_232400	CDS	ACA1_232400	NW_004457518.1	19069	20521	R	encoded by transcript ACA1_232400A; shortchain dehydrogenase/reductase SDR, putative	complement(join(19069..19166,19268..19361,19455..19526,19652..19789,19884..19960,20059..20252,20484..>20521))	Acanthamoeba castellanii str. Neff	14919875
ACA1_232410	CDS	ACA1_232410	NW_004457518.1	20707	21893	D	encoded by transcript ACA1_232410A; transporter, major intrinsic protein (MIP) superfamily protein	join(20707..20872,20983..21137,21259..21440,21555..21739,21823..21893)	Acanthamoeba castellanii str. Neff	14919876
ACA1_232420	CDS	ACA1_232420	NW_004457518.1	21971	23074	D	encoded by transcript ACA1_232420A; tetratricopeptide repeat domain containing protein	join(21971..22066,22183..22374,22499..22625,22740..22853,22953..23074)	Acanthamoeba castellanii str. Neff	14919877
ACA1_232430	CDS	ACA1_232430	NW_004457518.1	23245	24459	D	encoded by transcript ACA1_232430A; CBS domain containing protein	join(23245..23373,23450..23612,23688..23775,23842..24130,24202..24459)	Acanthamoeba castellanii str. Neff	14919878
ACA1_232440	CDS	ACA1_232440	NW_004457518.1	24570	26738	R	encoded by transcript ACA1_232440A; transporter, major facilitator subfamily protein	complement(join(24570..24910,24998..25947,26032..26138,26203..26236,26332..26738))	Acanthamoeba castellanii str. Neff	14919879
ACA1_232450	CDS	ACA1_232450	NW_004457518.1	27383	29222	R	encoded by transcript ACA1_232450A; protein kinase domain containing protein	complement(join(27383..28082,28177..28330,28435..28615,28713..28788,28882..29006,29043..29222))	Acanthamoeba castellanii str. Neff	14919880
ACA1_232460	CDS	ACA1_232460	NW_004457518.1	30647	34809	D	encoded by transcript ACA1_232460A; protein kinase domain containing protein	join(30647..30752,30890..31101,31238..31294,31397..32573,32669..32766,32851..32990,33085..33145,33298..33406,33544..33605,33838..33964,34083..34165,34280..34369,34461..34554,34682..34809)	Acanthamoeba castellanii str. Neff	14919881
ACA1_232470	CDS	ACA1_232470	NW_004457518.1	35167	35738	R	encoded by transcript ACA1_232470A; uncharacterized protein	complement(join(35167..35230,35309..35445,35550..35738))	Acanthamoeba castellanii str. Neff	14919882
ACA1_232480	CDS	ACA1_232480	NW_004457518.1	35923	36437	R	encoded by transcript ACA1_232480A; ribosomal protein S23 (S12), putative	complement(join(35923..36063,36153..>36437))	Acanthamoeba castellanii str. Neff	14919883
ACA1_232490	CDS	ACA1_232490	NW_004457518.1	37739	40159	D	encoded by transcript ACA1_232490A; uncharacterized protein	join(37739..38361,38640..39994,40077..40159)	Acanthamoeba castellanii str. Neff	14919884
ACA1_232500	CDS	ACA1_232500	NW_004457518.1	40592	42409	D	encoded by transcript ACA1_232500A; tryptophan 2,3-dioxygenase, putative	join(40592..40888,40997..41176,41255..41351,41427..41502,41602..41725,41809..41902,41988..42125,42231..42409)	Acanthamoeba castellanii str. Neff	14919885
ACA1_232520	CDS	ACA1_232520	NW_004457518.1	44976	49307	D	encoded by transcript ACA1_232520A; SIT4 phosphataseassociated protein	join(44976..45243,45419..45614,45688..45837,45967..46465,46540..46695,46892..47056,47162..47191,48226..48249,48335..48499,48605..48967,49025..49172,49252..49307)	Acanthamoeba castellanii str. Neff	14919887
ACA1_232630	CDS	ACA1_232630	NW_004457518.1	49784	51135	D	encoded by transcript ACA1_232630A; FYVE zinc finger domain containing protein	join(49784..49841,49918..50129,50247..50367,50503..50586,50723..50846,50988..51135)	Acanthamoeba castellanii str. Neff	14919888
ACA1_232640	CDS	ACA1_232640	NW_004457518.1	51382	53166	R	encoded by transcript ACA1_232640A; exopolyphosphatase	complement(join(51382..51614,51641..51715,51758..51919,52059..52628,52755..52881,53032..53166))	Acanthamoeba castellanii str. Neff	14919889
ACA1_232650	CDS	ACA1_232650	NW_004457518.1	53326	55944	R	encoded by transcript ACA1_232650A; AMPbinding enzyme domain containing protein	complement(join(53326..53446,53534..53726,53831..53887,53966..54157,54246..54372,54496..54608,54749..54829,54911..55017,55128..55213,55341..55459,55565..55696,55785..55820,55899..55944))	Acanthamoeba castellanii str. Neff	14919890
ACA1_232660	CDS	ACA1_232660	NW_004457518.1	56085	57423	D	encoded by transcript ACA1_232660A; uncharacterized protein	join(56085..56243,56424..56752,56863..56965,57076..57423)	Acanthamoeba castellanii str. Neff	14919891
ACA1_232670	CDS	ACA1_232670	NW_004457518.1	57698	63920	D	encoded by transcript ACA1_232670A; BAH domain containing protein	join(57698..57742,57922..58042,58138..58186,58265..58434,58538..58675,58762..58883,58994..59138,59242..59575,59647..59852,59967..60230,60312..60505,60602..61607,61708..63920)	Acanthamoeba castellanii str. Neff	14919892
ACA1_232680	CDS	ACA1_232680	NW_004457518.1	64296	67406	D	encoded by transcript ACA1_232680A; protein kinase domain containing protein	join(64296..65027,65195..65366,65446..65531,65730..65807,65977..66004,66109..66287,66556..66663,66793..67035,67145..67211,67312..67406)	Acanthamoeba castellanii str. Neff	14919893
ACA1_232690	CDS	ACA1_232690	NW_004457518.1	67992	69955	R	encoded by transcript ACA1_232690A; Vacuolar proton pump d subunit, putative	complement(join(67992..68073,68166..68326,68460..68636,68738..68888,69547..69718,69784..69955))	Acanthamoeba castellanii str. Neff	14919894
ACA1_232800	CDS	ACA1_232800	NW_004457518.1	70285	72402	R	encoded by transcript ACA1_232800A; peptidase dimerization domain containing protein	complement(join(70285..70416,70515..70645,70750..70888,71008..71090,71221..71296,71415..71474,71604..71660,71843..72063,72264..72402))	Acanthamoeba castellanii str. Neff	14919895
ACA1_232810	CDS	ACA1_232810	NW_004457518.1	72501	75446	D	encoded by transcript ACA1_232810A; CHY zinc finger protein	join(72501..72613,72729..72826,73013..73079,73219..73330,73432..73775,73892..73986,74114..74223,74375..74570,74649..74763,74892..74943,75063..75095,75182..75268,75345..75446)	Acanthamoeba castellanii str. Neff	14919896
ACA1_232820	CDS	ACA1_232820	NW_004457518.1	75609	82994	R	encoded by transcript ACA1_232820A; uncharacterized protein	complement(join(75609..75695,75807..75905,75978..76142,76277..76383,76511..76667,76789..76932,77029..77226,77369..77559,77648..78150,78302..78551,78667..79038,79154..79325,79476..79597,79721..79904,80032..80174,80298..82556,82724..82826,82965..82994))	Acanthamoeba castellanii str. Neff	14919897
ACA1_232830	CDS	ACA1_232830	NW_004457518.1	83601	84345	R	encoded by transcript ACA1_232830A; Surfeit locus protein 5	complement(join(83601..83672,83760..83915,84060..84122,84217..84345))	Acanthamoeba castellanii str. Neff	14919898
ACA1_232840	CDS	ACA1_232840	NW_004457518.1	84485	86566	R	encoded by transcript ACA1_232840A; uncharacterized protein	complement(join(84485..84682,84765..84998,85124..85278,85404..85599,85700..85817,85980..86566))	Acanthamoeba castellanii str. Neff	14919899
ACA1_232850	CDS	ACA1_232850	NW_004457518.1	86663	87087	D	encoded by transcript ACA1_232850A; uncharacterized protein	join(86663..86755,86899..87087)	Acanthamoeba castellanii str. Neff	14919900
ACA1_232860	CDS	ACA1_232860	NW_004457518.1	87090	89570	D	encoded by transcript ACA1_232860A; uncharacterized protein	join(87090..87244,87329..87360,87516..87626,87758..87864,87959..88446,88581..88652,88771..88851,88952..89570)	Acanthamoeba castellanii str. Neff	14919901
ACA1_232870	CDS	ACA1_232870	NW_004457518.1	89830	90983	D	encoded by transcript ACA1_232870A; Zn-finger in Ran binding protein and others domain containing protein	join(89830..89884,89951..90108,90258..90531,90635..90745,90865..90983)	Acanthamoeba castellanii str. Neff	14919698
ACA1_232880	CDS	ACA1_232880	NW_004457518.1	91211	97121	D	encoded by transcript ACA1_232880A; Fucokinase	join(91211..91474,91594..91648,91899..92034,92206..92371,92548..92684,92813..92916,93012..93094,93328..93501,93685..93894,93975..94416,94640..94788,94865..94943,95073..95341,95467..95515,96043..96089,96241..96274,96346..96473,96633..96747,96937..97121)	Acanthamoeba castellanii str. Neff	14919699
ACA1_232990	CDS	ACA1_232990	NW_004457518.1	97212	98146	D	encoded by transcript ACA1_232990A; fucokinase family protein	join(97212..97380,97456..97513,97602..97738,97829..97918,97977..98146)	Acanthamoeba castellanii str. Neff	14919700
ACA1_233000	CDS	ACA1_233000	NW_004457518.1	98234	99669	R	encoded by transcript ACA1_233000A; fatty acid betaoxidation-related protein	complement(join(98234..98451,98600..98659,98764..98839,98939..98991,99133..99364,99460..99669))	Acanthamoeba castellanii str. Neff	14919701
ACA1_233020	CDS	ACA1_233020	NW_004457518.1	105681	107533	R	encoded by transcript ACA1_233020A; uncharacterized protein	complement(join(105681..105959,106079..106215,106344..106489,106635..107083,107261..107533))	Acanthamoeba castellanii str. Neff	14919703
ACA1_233030	CDS	ACA1_233030	NW_004457518.1	108369	109835	D	encoded by transcript ACA1_233030A; ankyrin, putative	join(108369..108525,108689..109148,109344..109488,109620..109835)	Acanthamoeba castellanii str. Neff	14919704
ACA1_233040	CDS	ACA1_233040	NW_004457518.1	110047	113395	R	encoded by transcript ACA1_233040A; RhoGAP domain containing protein	complement(join(110047..110159,110244..110395,110583..110736,110891..110968,111084..111255,111464..111610,111758..111859,112018..112167,112399..112459,112584..113395))	Acanthamoeba castellanii str. Neff	14919705
ACA1_233050	CDS	ACA1_233050	NW_004457518.1	113663	114685	D	encoded by transcript ACA1_233050A; Ubox domain containing protein	join(113663..113792,114093..114685)	Acanthamoeba castellanii str. Neff	14919706
ACA1_233060	CDS	ACA1_233060	NW_004457518.1	115774	118282	D	encoded by transcript ACA1_233060A; Notchless-related, putative	join(115774..115940,116124..116222,116522..116619,116700..116839,116943..117072,117200..117258,117391..117474,117566..117660,117787..117946,118039..118109,118276..118282)	Acanthamoeba castellanii str. Neff	14919707
ACA1_233070	CDS	ACA1_233070	NW_004457518.1	118411	119836	D	encoded by transcript ACA1_233070A; uncharacterized protein	join(118411..118616,118696..118783,118909..118965,119065..119188,119256..119352,119522..119626,119761..119836)	Acanthamoeba castellanii str. Neff	14919708
ACA1_233080	CDS	ACA1_233080	NW_004457518.1	120104	124098	D	encoded by transcript ACA1_233080A; NOT2 / NOT3 / NOT5 family protein	join(120104..120289,120375..120519,120634..120960,121180..121217,121278..121566,121618..121710,121895..121966,122112..122206,122335..122545,122647..122695,122925..123035,123221..123424,123591..123870,123907..124098)	Acanthamoeba castellanii str. Neff	14919709
ACA1_233090	CDS	ACA1_233090	NW_004457518.1	124283	127284	D	encoded by transcript ACA1_233090A; eukaryotic translation initiation factor family protein	join(124283..124732,124831..124962,125065..125255,125400..125543,125630..125717,125834..125965,126109..126216,126334..126463,126512..126550,126564..126857,126929..127284)	Acanthamoeba castellanii str. Neff	14919710
ACA1_233300	CDS	ACA1_233300	NW_004457518.1	133207	134056	D	encoded by transcript ACA1_233300A; DNAbinding protein smubp-2, putative	join(<133207..133452,133532..133633,133707..134032,134047..134056)	Acanthamoeba castellanii str. Neff	14919711
ACA1_233410	CDS	ACA1_233410	NW_004457518.1	135908	137073	D	encoded by transcript ACA1_233410A; NFX1type zinc finger-containing protein 1, putative	join(135908..135969,136044..136301,136401..136540,136623..136713,136806..136931,137025..137073)	Acanthamoeba castellanii str. Neff	14919712
ACA1_233420	CDS	ACA1_233420	NW_004457518.1	137196	138574	D	encoded by transcript ACA1_233420A; uncharacterized protein	join(137196..137341,137461..137601,137681..137790,137820..138193,138261..138350,138428..138574)	Acanthamoeba castellanii str. Neff	14919713
ACA1_233430	CDS	ACA1_233430	NW_004457518.1	138783	141514	R	encoded by transcript ACA1_233430A; uncharacterized protein	complement(join(138783..138822,138848..139131,139245..139324,139411..139566,139645..139719,139820..139903,139979..140050,140127..140273,140659..140742,140822..140893,140975..141084,141171..141324,141427..141514))	Acanthamoeba castellanii str. Neff	14919714
ACA1_233440	CDS	ACA1_233440	NW_004457518.1	142084	144036	R	encoded by transcript ACA1_233440A; uncharacterized protein	complement(142084..>144036)	Acanthamoeba castellanii str. Neff	14919715
ACA1_233450	CDS	ACA1_233450	NW_004457518.1	144590	149641	D	encoded by transcript ACA1_233450A; serine/threonine protein kinase, putative	join(144590..147216,147334..149641)	Acanthamoeba castellanii str. Neff	14919716
ACA1_233460	CDS	ACA1_233460	NW_004457518.1	149697	150275	R	encoded by transcript ACA1_233460A; uncharacterized protein	complement(149697..150275)	Acanthamoeba castellanii str. Neff	14919717
ACA1_233470	CDS	ACA1_233470	NW_004457518.1	150536	152201	D	encoded by transcript ACA1_233470A; uncharacterized protein	join(150536..150590,150688..151193,151263..152201)	Acanthamoeba castellanii str. Neff	14919718
ACA1_233480	CDS	ACA1_233480	NW_004457518.1	152611	152943	D	encoded by transcript ACA1_233480A; uncharacterized protein	152611..152943	Acanthamoeba castellanii str. Neff	14919719
ACA1_233590	CDS	ACA1_233590	NW_004457518.1	154156	159912	D	encoded by transcript ACA1_233590A; uncharacterized protein	join(154156..154257,154400..154505,154595..154757,154842..154929,155029..155345,155416..155492,155606..155713,155778..155899,156062..157225,157332..157422,157489..157585,157697..157989,158085..158221,158590..159912)	Acanthamoeba castellanii str. Neff	14919720
ACA1_233600	CDS	ACA1_233600	NW_004457518.1	160086	162130	D	encoded by transcript ACA1_233600A; DNA topoisomerase 6 subunit A, putative	join(160086..160444,160587..160656,160724..160829,160894..160959,161131..161308,161369..161706,161794..161927,161987..162130)	Acanthamoeba castellanii str. Neff	14919721
ACA1_233610	CDS	ACA1_233610	NW_004457518.1	162242	163796	D	encoded by transcript ACA1_233610A; uncharacterized protein	join(162242..162482,162561..162738,162816..163148,163252..163472,163603..163796)	Acanthamoeba castellanii str. Neff	14919722
ACA1_233620	CDS	ACA1_233620	NW_004457518.1	163904	165541	D	encoded by transcript ACA1_233620A; uncharacterized protein	join(163904..164091,164134..164323,164408..164572,164651..165541)	Acanthamoeba castellanii str. Neff	14919723
ACA1_233630	CDS	ACA1_233630	NW_004457518.1	165724	168007	D	encoded by transcript ACA1_233630A; von Willebrand factor type A domain containing protein	join(165724..167826,167897..168007)	Acanthamoeba castellanii str. Neff	14919724
ACA1_233740	CDS	ACA1_233740	NW_004457518.1	169623	169940	D	encoded by transcript ACA1_233740A; uncharacterized protein	169623..169940	Acanthamoeba castellanii str. Neff	14919725
ACA1_233850	CDS	ACA1_233850	NW_004457518.1	171361	171753	D	encoded by transcript ACA1_233850A; pxPhosphoserine phosphatase	join(<171361..171540,171646..171753)	Acanthamoeba castellanii str. Neff	14919726
ACA1_233860	CDS	ACA1_233860	NW_004457518.1	171820	173384	R	encoded by transcript ACA1_233860A; von Willebrand factor type A domain containing protein, putative	complement(join(171820..172158,172293..172536,172620..172846,172995..173144,173250..173384))	Acanthamoeba castellanii str. Neff	14919727
ACA1_233870	CDS	ACA1_233870	NW_004457518.1	173618	175036	R	encoded by transcript ACA1_233870A; uncharacterized protein	complement(join(173618..173852,173958..174121,174223..174325,174442..174537,174648..174794,174909..175036))	Acanthamoeba castellanii str. Neff	14919728
ACA1_233880	CDS	ACA1_233880	NW_004457518.1	175318	178240	D	encoded by transcript ACA1_233880A; Ser/Thr phosphatase family superfamily protein	join(175318..175413,175547..175735,175821..175938,176019..176147,176236..176370,176487..176626,176729..176819,176909..177067,177222..177350,177457..177565,177718..177829,177878..177983,178062..178240)	Acanthamoeba castellanii str. Neff	14919729
ACA1_233990	CDS	ACA1_233990	NW_004457518.1	179785	180952	D	encoded by transcript ACA1_233990A; Autophagyrelated protein 18, putative	join(<179785..179937,180122..180261,180458..180560,180644..180742,180857..180952)	Acanthamoeba castellanii str. Neff	14919730
ACA1_234000	CDS	ACA1_234000	NW_004457518.1	181222	184293	D	encoded by transcript ACA1_234000A; diphosphonucleotide phosphatase 1, putative	join(181222..181341,181434..181511,181601..181714,181805..181934,182060..182188,182277..182411,182512..182651,182778..182883,182974..183132,183273..183401,183525..183633,183733..183844,183939..184011,184115..184293)	Acanthamoeba castellanii str. Neff	14919731
ACA1_234010	CDS	ACA1_234010	NW_004457518.1	184818	185006	D	encoded by transcript ACA1_234010A; uncharacterized protein	184818..185006	Acanthamoeba castellanii str. Neff	14919732
ACA1_234020	CDS	ACA1_234020	NW_004457518.1	185341	186195	R	encoded by transcript ACA1_234020A; uncharacterized protein	complement(185341..186195)	Acanthamoeba castellanii str. Neff	14919733
ACA1_234030	CDS	ACA1_234030	NW_004457518.1	186511	186894	D	encoded by transcript ACA1_234030A; fascin subfamily protein	186511..186894	Acanthamoeba castellanii str. Neff	14919734
ACA1_234040	CDS	ACA1_234040	NW_004457518.1	187626	188823	D	encoded by transcript ACA1_234040A; uncharacterized protein	join(187626..187958,188051..188134,188218..188330,188436..188823)	Acanthamoeba castellanii str. Neff	14919735
ACA1_234050	CDS	ACA1_234050	NW_004457518.1	188949	190821	D	encoded by transcript ACA1_234050A; uncharacterized protein	join(188949..188979,189075..189180,189285..189405,189509..189613,189906..190005,190078..190134,190252..190361,190472..190510,190603..190821)	Acanthamoeba castellanii str. Neff	14919736
ACA1_234060	CDS	ACA1_234060	NW_004457518.1	191050	192805	R	encoded by transcript ACA1_234060A; SPRY domain containing protein	complement(join(191050..191178,191267..191448,191551..191723,191790..191944,192042..192139,192267..192449,192589..192805))	Acanthamoeba castellanii str. Neff	14919737
ACA1_234070	CDS	ACA1_234070	NW_004457518.1	193160	194483	D	encoded by transcript ACA1_234070A; ELL complex EAP30 subunit	join(193160..193198,193302..193401,193512..193585,193654..193754,193825..193906,194004..194063,194177..194251,194388..194483)	Acanthamoeba castellanii str. Neff	14919738
ACA1_234080	CDS	ACA1_234080	NW_004457518.1	194661	196924	D	encoded by transcript ACA1_234080A; LBP / BPI / CETP family, Nterminal domain containing protein	join(194661..194778,194900..195104,195189..195407,195500..195596,195696..195824,195906..195989,196131..196179,196274..196473,196550..196615,196685..196924)	Acanthamoeba castellanii str. Neff	14919739
ACA1_234090	CDS	ACA1_234090	NW_004457518.1	197022	197733	D	encoded by transcript ACA1_234090A; Fbox domain containing protein	join(197022..197158,197225..197337,197435..197733)	Acanthamoeba castellanii str. Neff	14919740
ACA1_234100	CDS	ACA1_234100	NW_004457518.1	198068	201428	D	encoded by transcript ACA1_234100A; uncharacterized protein	join(198068..198163,198315..198408,198552..198644,198763..199002,199091..199477,199619..199690,199762..199826,199960..200004,200092..200173,200247..200340,200465..200581,200670..200788,200890..201428)	Acanthamoeba castellanii str. Neff	14919741
ACA1_234110	CDS	ACA1_234110	NW_004457518.1	201799	203551	D	encoded by transcript ACA1_234110A; rhodaneselike domain containing protein	join(201799..201928,202001..202121,202231..202306,202458..202607,202725..202845,202984..203060,203130..203365,203464..203551)	Acanthamoeba castellanii str. Neff	14919742
ACA1_234120	CDS	ACA1_234120	NW_004457518.1	203737	205324	R	encoded by transcript ACA1_234120A; LIM domain containing protein	complement(join(203737..204596,204768..204950,205011..205143,205244..205324))	Acanthamoeba castellanii str. Neff	14919743
ACA1_234130	CDS	ACA1_234130	NW_004457518.1	205629	205987	D	encoded by transcript ACA1_234130A; uncharacterized protein	join(205629..205797,205971..205987)	Acanthamoeba castellanii str. Neff	14919744
ACA1_234140	CDS	ACA1_234140	NW_004457518.1	206145	207896	D	encoded by transcript ACA1_234140A; Damino acid oxidase	join(206145..206257,206365..206429,206497..206549,206679..206774,206966..207022,207095..207209,207415..207547,207640..207719,207787..207896)	Acanthamoeba castellanii str. Neff	14919745
ACA1_234150	CDS	ACA1_234150	NW_004457518.1	208021	212119	D	encoded by transcript ACA1_234150A; Integrator complex subunit 6, putative	join(208021..208084,208097..208290,208465..208617,208696..208785,208917..209135,209323..209422,209531..209811,209907..210110,210208..210363,210508..210670,210795..211125,211212..211823,211936..212119)	Acanthamoeba castellanii str. Neff	14919746
ACA1_234160	CDS	ACA1_234160	NW_004457518.1	212447	213676	R	encoded by transcript ACA1_234160A; transcription factor tfiib repeat domain containing protein	complement(join(212447..212734,212837..213079,213149..213486,213634..213676))	Acanthamoeba castellanii str. Neff	14919747
ACA1_234170	CDS	ACA1_234170	NW_004457518.1	213999	216394	D	encoded by transcript ACA1_234170A; outer membrane protein, OMP85 family	join(213999..214031,214212..214544,214666..214791,215037..215207,215384..215470,215607..215666,215895..216027,216207..216394)	Acanthamoeba castellanii str. Neff	14919748
ACA1_234180	CDS	ACA1_234180	NW_004457518.1	217827	218540	D	encoded by transcript ACA1_234180A; oxidoreductase	217827..218540	Acanthamoeba castellanii str. Neff	14919749
ACA1_234190	CDS	ACA1_234190	NW_004457518.1	222484	223017	D	encoded by transcript ACA1_234190A; uncharacterized protein	join(222484..222544,222599..222660,222961..223017)	Acanthamoeba castellanii str. Neff	14919750
ACA1_234200	CDS	ACA1_234200	NW_004457518.1	223473	224908	R	encoded by transcript ACA1_234200A; uncharacterized protein	complement(join(223473..223867,223987..224102,224469..224908))	Acanthamoeba castellanii str. Neff	14919751
ACA1_234210	CDS	ACA1_234210	NW_004457518.1	225144	225685	R	encoded by transcript ACA1_234210A; uncharacterized protein	complement(join(225144..225341,225572..225685))	Acanthamoeba castellanii str. Neff	14919752
ACA1_234220	CDS	ACA1_234220	NW_004457518.1	226013	231339	R	encoded by transcript ACA1_234220A; uncharacterized protein	complement(join(226013..226027,226068..226262,226420..226493,226610..226721,226848..227006,227108..228097,228292..228387,228492..228566,228749..228853,229019..229096,229178..229872,230014..230524,230772..230938,231043..231117,231288..231339))	Acanthamoeba castellanii str. Neff	14919753
ACA1_234230	CDS	ACA1_234230	NW_004457518.1	231574	234609	D	encoded by transcript ACA1_234230A; peptidase, S8/S53 subfamily protein	join(231574..232076,232215..232283,232358..232567,232704..232776,233062..233189,233310..233495,233880..234054,234160..234609)	Acanthamoeba castellanii str. Neff	14919754
ACA1_234240	CDS	ACA1_234240	NW_004457518.1	237650	243498	D	encoded by transcript ACA1_234240A; uncharacterized protein	join(237650..237746,237822..238030,238185..238298,238483..238621,238818..238982,239102..239211,239349..239559,239628..239877,240042..240150,240278..240439,240512..240630,240645..240726,240854..241000,241069..241251,241316..241618,241802..242169,242393..242604,242725..242818,243006..243498)	Acanthamoeba castellanii str. Neff	14919755
ACA1_234250	CDS	ACA1_234250	NW_004457518.1	243635	253428	R	encoded by transcript ACA1_234250A; Armadillo/betacatenin-like repeat domain containing protein	complement(join(243635..243756,243989..244108,244383..244508,244664..244770,244950..245091,245256..245387,245499..245630,245862..245984,246283..246405,246498..246654,246799..246890,246990..247118,247305..247430,247576..247698,247905..247952,248082..248293,248455..248550,248629..248642,248673..248900,249097..249211,249299..249378,249493..249596,249751..250203,250332..250466,250555..250656,250826..250978,251126..251224,251399..251470,251646..251768,252003..252108,252204..252254,252402..252465,252567..252744,252900..253126,253304..253428))	Acanthamoeba castellanii str. Neff	14919756
ACA1_234260	CDS	ACA1_234260	NW_004457518.1	254519	255661	D	encoded by transcript ACA1_234260A; RhoGEF domain containing protein	join(254519..254566,254608..254794,254973..255198,255304..255364,255471..255563,255650..255661)	Acanthamoeba castellanii str. Neff	14919757
ACA1_234270	CDS	ACA1_234270	NW_004457518.1	255706	256488	D	encoded by transcript ACA1_234270A; uncharacterized protein	join(255706..255773,256137..256488)	Acanthamoeba castellanii str. Neff	14919758
ACA1_234280	CDS	ACA1_234280	NW_004457518.1	256752	259386	D	encoded by transcript ACA1_234280A; uncharacterized protein	join(256752..257434,257549..257657,257768..257872,257999..258164,258230..258350,258481..258521,258620..258701,258774..258917,258996..259084,259149..259183,259279..259386)	Acanthamoeba castellanii str. Neff	14919759
ACA1_234290	CDS	ACA1_234290	NW_004457518.1	261428	263364	R	encoded by transcript ACA1_234290A; sirtuin, putative	complement(join(261428..261484,261543..261655,261735..261812,261955..262109,262219..262354,262495..262627,262719..262833,262946..263047,263132..263219,263298..263364))	Acanthamoeba castellanii str. Neff	14919760
ACA1_234300	CDS	ACA1_234300	NW_004457518.1	263421	268645	R	encoded by transcript ACA1_234300A; uncharacterized protein	complement(join(263421..263615,263749..264195,264353..264434,264552..264897,265047..265161,265467..265578,265778..265865,265973..266091,266258..266380,266778..266864,266969..267098,267307..267412,267521..267615,267742..267838,267998..268645))	Acanthamoeba castellanii str. Neff	14919761
ACA1_234310	CDS	ACA1_234310	NW_004457518.1	268801	271850	R	encoded by transcript ACA1_234310A; RNA recognition motif domain containing protein	complement(join(268801..269210,269303..269591,269699..269956,270069..270559,270725..270887,270976..271181,271350..271693,271708..271850))	Acanthamoeba castellanii str. Neff	14919762
ACA1_234320	CDS	ACA1_234320	NW_004457518.1	272581	275633	R	encoded by transcript ACA1_234320A; fibronectin type III domain containing protein	complement(join(272581..273869,274098..274247,274398..274562,274645..274983,275058..275187,275484..275633))	Acanthamoeba castellanii str. Neff	14919763
ACA1_234330	CDS	ACA1_234330	NW_004457518.1	275841	277168	R	encoded by transcript ACA1_234330A; uncharacterized protein	complement(join(275841..275972,276051..276148,276295..276323,276489..276562,276755..277168))	Acanthamoeba castellanii str. Neff	14919764
ACA1_234340	CDS	ACA1_234340	NW_004457518.1	277456	282895	D	encoded by transcript ACA1_234340A; Ubiquitin carboxylterminal hydrolase domain containing protein	join(277456..277776,277950..278054,278208..278257,278495..278647,278760..279011,279177..279358,279540..279655,279833..279931,280064..280161,280267..280511,280705..281132,281329..281523,281630..281808,281974..282895)	Acanthamoeba castellanii str. Neff	14919765
ACA1_234350	CDS	ACA1_234350	NW_004457518.1	283062	289040	R	encoded by transcript ACA1_234350A; surface antigen repeat-containing protein	complement(join(283062..283211,283287..283420,283552..283709,283793..284491,284619..284710,284889..285524,285547..285572,285777..286656,286755..289040))	Acanthamoeba castellanii str. Neff	14919766
ACA1_234460	CDS	ACA1_234460	NW_004457518.1	289322	290038	D	encoded by transcript ACA1_234460A; uncharacterized protein	join(289322..289388,289516..289735,289846..290038)	Acanthamoeba castellanii str. Neff	14919768
ACA1_234470	CDS	ACA1_234470	NW_004457518.1	290334	294818	R	encoded by transcript ACA1_234470A; pentatricopeptide repeat domain/PPR repeatcontaining protein	complement(join(290334..290990,291244..291338,291459..291608,291728..291811,292030..292202,292325..292398,292499..292682,292754..292981,293105..293265,293460..293545,293636..293706,293800..293934,294321..294410,294527..294600,294699..294818))	Acanthamoeba castellanii str. Neff	14919769
ACA1_234580	CDS	ACA1_234580	NW_004457518.1	295729	297368	R	encoded by transcript ACA1_234580A; RWPRK domain containing protein	complement(join(295729..296462,296568..296786,296868..296998,297078..297101,297167..297216,297285..297368))	Acanthamoeba castellanii str. Neff	14919770
ACA1_234590	CDS	ACA1_234590	NW_004457518.1	298060	300418	D	encoded by transcript ACA1_234590A; PH domain containing protein	join(298060..298243,298359..298572,298710..299382,299499..299642,299741..299812,299918..300063,300170..300260,300341..300418)	Acanthamoeba castellanii str. Neff	14919771
ACA1_234600	CDS	ACA1_234600	NW_004457518.1	302432	303851	D	encoded by transcript ACA1_234600A; KH domain containing protein	join(302432..303040,303182..303433,303514..303604,303694..303851)	Acanthamoeba castellanii str. Neff	14919772
ACA1_234610	CDS	ACA1_234610	NW_004457518.1	304096	305152	R	encoded by transcript ACA1_234610A; peptidylprolyl cis-trans isomerase, cyclophilin-type, putative	complement(join(304096..304233,304313..304362,304441..304569,304638..304780,304858..304894,304969..305014,305087..305152))	Acanthamoeba castellanii str. Neff	14919773
ACA1_234620	CDS	ACA1_234620	NW_004457518.1	305617	307462	D	encoded by transcript ACA1_234620A; polyadenylate-binding protein family protein	join(305617..306774,307232..307462)	Acanthamoeba castellanii str. Neff	14919774
ACA1_234730	CDS	ACA1_234730	NW_004457518.1	307819	308867	D	encoded by transcript ACA1_234730A; uncharacterized protein	join(307819..307941,308017..308350,308422..308867)	Acanthamoeba castellanii str. Neff	14919775
ACA1_234740	CDS	ACA1_234740	NW_004457518.1	309004	311079	R	encoded by transcript ACA1_234740A; peptidase, S54 family protein	complement(join(309004..309081,309141..309377,309491..309682,309819..309953,310066..310185,310329..310496,310630..311079))	Acanthamoeba castellanii str. Neff	14919776
ACA1_234750	CDS	ACA1_234750	NW_004457518.1	311461	311910	R	encoded by transcript ACA1_234750A; LYR motifcontaining protein 1, putative	complement(join(311461..311631,311704..311910))	Acanthamoeba castellanii str. Neff	14919777
ACA1_234760	CDS	ACA1_234760	NW_004457518.1	311999	313741	R	encoded by transcript ACA1_234760A; WH1 domain containing protein	complement(join(311999..312537,312606..312704,312778..312828,312907..313098,313186..313741))	Acanthamoeba castellanii str. Neff	14919778
ACA1_234770	CDS	ACA1_234770	NW_004457518.1	313964	315204	R	encoded by transcript ACA1_234770A; uncharacterized protein	complement(join(313964..314388,314454..314544,314626..314697,314765..314972,315059..315204))	Acanthamoeba castellanii str. Neff	14919779
ACA1_234780	CDS	ACA1_234780	NW_004457518.1	315704	316835	R	encoded by transcript ACA1_234780A; uncharacterized protein	complement(join(315704..315778,315883..316042,316128..316227,316340..316568,316716..316835))	Acanthamoeba castellanii str. Neff	14919780
ACA1_234790	CDS	ACA1_234790	NW_004457518.1	317166	319874	R	encoded by transcript ACA1_234790A; protein phosphatase 2C domain containing protein	complement(join(317166..317398,317492..318347,318459..318697,318795..318905,319025..319197,319313..319568,319757..319874))	Acanthamoeba castellanii str. Neff	14919781
ACA1_234800	CDS	ACA1_234800	NW_004457518.1	319943	321704	R	encoded by transcript ACA1_234800A; uncharacterized protein	complement(join(319943..320050,320171..320310,320402..321704))	Acanthamoeba castellanii str. Neff	14919782
ACA1_234810	CDS	ACA1_234810	NW_004457518.1	321916	322417	R	encoded by transcript ACA1_234810A; uncharacterized protein	complement(join(321916..322033,322131..322231,322367..322417))	Acanthamoeba castellanii str. Neff	14919783
ACA1_234820	CDS	ACA1_234820	NW_004457518.1	322784	325015	R	encoded by transcript ACA1_234820A; Serine/threonine protein phosphatase 5, putative	complement(join(322784..322846,322949..323181,323279..323438,323513..323620,323701..323809,323893..324096,324209..324314,324435..324585,324705..324776,324862..324941,325009..>325015))	Acanthamoeba castellanii str. Neff	14919784
ACA1_234930	CDS	ACA1_234930	NW_004457518.1	325345	325667	D	encoded by transcript ACA1_234930A; uncharacterized protein	join(<325345..325410,325509..325667)	Acanthamoeba castellanii str. Neff	14919785
ACA1_235040	CDS	ACA1_235040	NW_004457518.1	326463	327384	R	encoded by transcript ACA1_235040A; thioesterase family domain containing protein	complement(join(326463..326642,326756..326874,327028..327141,327234..327384))	Acanthamoeba castellanii str. Neff	14919786
ACA1_235050	CDS	ACA1_235050	NW_004457518.1	327808	329651	D	encoded by transcript ACA1_235050A; RNA ligase, putative	join(327808..327865,327958..328035,328181..328288,328412..328522,328621..328858,328952..329651)	Acanthamoeba castellanii str. Neff	14919787
ACA1_235060	CDS	ACA1_235060	NW_004457518.1	329691	330471	R	encoded by transcript ACA1_235060A; glutathione Stransferase, C-terminal domain containing protein	complement(join(329691..329873,329972..330291,330396..330471))	Acanthamoeba castellanii str. Neff	14919788
ACA1_235070	CDS	ACA1_235070	NW_004457518.1	330723	332651	R	encoded by transcript ACA1_235070A; integral membrane protein duf6 domain containing protein	complement(join(330723..331201,331321..331603,331692..331932,332018..332160,332511..332651))	Acanthamoeba castellanii str. Neff	14919789
ACA1_235080	CDS	ACA1_235080	NW_004457518.1	333405	334544	R	encoded by transcript ACA1_235080A; ankyrin repeat-containing protein	complement(333405..334544)	Acanthamoeba castellanii str. Neff	14919790
ACA1_235090	CDS	ACA1_235090	NW_004457518.1	335372	336782	R	encoded by transcript ACA1_235090A; lysophospholipaselike protein	complement(join(335372..335653,335759..335832,335930..336006,336101..336155,336166..336232,336343..336425,336518..336627,336697..336782))	Acanthamoeba castellanii str. Neff	14919791
ACA1_235200	CDS	ACA1_235200	NW_004457518.1	338619	340230	R	encoded by transcript ACA1_235200A; SCPlike extracellular subfamily protein	complement(join(338619..338667,338871..339042,339119..339258,339343..339458,339539..339696,339766..339840,340038..340230))	Acanthamoeba castellanii str. Neff	14919792
ACA1_235410	CDS	ACA1_235410	NW_004457518.1	340595	344147	D	encoded by transcript ACA1_235410A; uncharacterized protein	join(340595..340712,340883..341013,341162..341265,341361..341519,341688..341864,341992..342140,342309..342490,342570..342656,342727..342837,342864..342939,343067..343230,343331..343406,343490..343720,343842..343992,344129..344147)	Acanthamoeba castellanii str. Neff	14919793
ACA1_235420	CDS	ACA1_235420	NW_004457518.1	344577	345292	D	encoded by transcript ACA1_235420A; uncharacterized protein	join(344577..345028,345096..345269,345280..345292)	Acanthamoeba castellanii str. Neff	14919794
ACA1_235530	CDS	ACA1_235530	NW_004457518.1	347493	349092	R	encoded by transcript ACA1_235530A; uncharacterized protein	complement(join(347493..347656,347796..347957,348074..348317,348388..348543,348683..348828,348923..348956,349015..349092))	Acanthamoeba castellanii str. Neff	14919795
ACA1_235540	CDS	ACA1_235540	NW_004457518.1	349213	349739	R	encoded by transcript ACA1_235540A; thioredoxin domain containing protein	complement(join(349213..349395,349477..349599,349674..349739))	Acanthamoeba castellanii str. Neff	14919796
ACA1_235650	CDS	ACA1_235650	NW_004457518.1	350264	350530	D	encoded by transcript ACA1_235650A; uncharacterized protein	350264..350530	Acanthamoeba castellanii str. Neff	14919797
ACA1_235660	CDS	ACA1_235660	NW_004457518.1	350738	351383	D	encoded by transcript ACA1_235660A; RasGEF domain containing protein	join(350738..350836,350985..351136,351215..351383)	Acanthamoeba castellanii str. Neff	14919798
ACA1_235670	CDS	ACA1_235670	NW_004457518.1	351389	352071	R	encoded by transcript ACA1_235670A; uncharacterized protein	complement(join(351389..351550,351615..351708,351842..352071))	Acanthamoeba castellanii str. Neff	14919799
ACA1_235680	CDS	ACA1_235680	NW_004457518.1	353004	355992	R	encoded by transcript ACA1_235680A; Rap/ran-GAP protein, putative	complement(join(353004..353131,353427..353543,353639..353800,353898..353996,354110..354189,354318..354478,354561..354685,354799..354940,355020..355224,355298..355383,355458..355643,355683..355805,355942..355992))	Acanthamoeba castellanii str. Neff	14919800
ACA1_235690	CDS	ACA1_235690	NW_004457518.1	357028	358569	R	encoded by transcript ACA1_235690A; uncharacterized protein	complement(join(357028..357305,357541..357721,357796..358062,358154..358445,358481..358569))	Acanthamoeba castellanii str. Neff	14919801
ACA1_235700	CDS	ACA1_235700	NW_004457518.1	359180	360363	R	encoded by transcript ACA1_235700A; TLD protein	complement(join(359180..359324,359469..359572,359697..359805,359978..360113,360189..360363))	Acanthamoeba castellanii str. Neff	14919802
ACA1_235710	CDS	ACA1_235710	NW_004457518.1	360772	361787	D	encoded by transcript ACA1_235710A; uncharacterized protein	join(360772..360795,360895..361693,361711..361787)	Acanthamoeba castellanii str. Neff	14919803
ACA1_235720	CDS	ACA1_235720	NW_004457518.1	361984	362702	D	encoded by transcript ACA1_235720A; uncharacterized protein	join(361984..362242,362335..362448,362527..362702)	Acanthamoeba castellanii str. Neff	14919804
ACA1_235730	CDS	ACA1_235730	NW_004457518.1	363312	366497	D	encoded by transcript ACA1_235730A; uncharacterized protein	join(363312..363606,363708..363940,364050..364114,364218..364488,364578..364970,365067..366497)	Acanthamoeba castellanii str. Neff	14919805
ACA1_235740	CDS	ACA1_235740	NW_004457518.1	367216	368592	R	encoded by transcript ACA1_235740A; uncharacterized protein	complement(join(367216..367321,367343..367391,367469..367549,367627..367788,367870..367923,367989..368592))	Acanthamoeba castellanii str. Neff	14919806
ACA1_235750	CDS	ACA1_235750	NW_004457518.1	368922	369718	D	encoded by transcript ACA1_235750A; rufy2 protein	join(368922..369096,369217..369271,369398..369449,369566..369718)	Acanthamoeba castellanii str. Neff	14919807
ACA1_235760	CDS	ACA1_235760	NW_004457518.1	369951	373107	D	encoded by transcript ACA1_235760A; Viral Atype inclusion protein repeat-containing protein	join(369951..372665,372781..373107)	Acanthamoeba castellanii str. Neff	14919808
ACA1_235770	CDS	ACA1_235770	NW_004457518.1	373168	374728	R	encoded by transcript ACA1_235770A; uncharacterized protein	complement(join(373168..374140,374207..374658,374720..374728))	Acanthamoeba castellanii str. Neff	14919809
ACA1_235780	CDS	ACA1_235780	NW_004457518.1	375286	376630	D	encoded by transcript ACA1_235780A; uncharacterized protein	join(375286..375672,375807..375894,375980..376053,376127..376630)	Acanthamoeba castellanii str. Neff	14919810
ACA1_235890	CDS	ACA1_235890	NW_004457518.1	378429	380667	D	encoded by transcript ACA1_235890A; uncharacterized protein	join(378429..378818,378966..379053,379139..379241,379359..379526,379615..380267,380366..380667)	Acanthamoeba castellanii str. Neff	14919811
ACA1_235900	CDS	ACA1_235900	NW_004457518.1	380865	381240	D	encoded by transcript ACA1_235900A; uncharacterized protein	join(380865..380981,381106..381240)	Acanthamoeba castellanii str. Neff	14919812
ACA1_235910	CDS	ACA1_235910	NW_004457518.1	381587	384064	R	encoded by transcript ACA1_235910A; SPRY domain containing protein	complement(join(381587..381613,381683..382257,382326..382565,382854..382984,383050..383138,383229..383326,383400..383609,383681..383815,383899..384064))	Acanthamoeba castellanii str. Neff	14919813
ACA1_235920	CDS	ACA1_235920	NW_004457518.1	384716	386209	R	encoded by transcript ACA1_235920A; RNA recognition motif domain containing protein	complement(join(384716..385063,385149..385357,385436..385520,385600..385729,385818..385913,386015..386121,386201..386209))	Acanthamoeba castellanii str. Neff	14919814
ACA1_235930	CDS	ACA1_235930	NW_004457518.1	386580	387756	R	encoded by transcript ACA1_235930A; uncharacterized protein	complement(join(386580..386821,386892..387084,387157..387756))	Acanthamoeba castellanii str. Neff	14919815
ACA1_235940	CDS	ACA1_235940	NW_004457518.1	387848	389296	D	encoded by transcript ACA1_235940A; uncharacterized protein	join(387848..388630,388788..388892,389006..389087,389205..389296)	Acanthamoeba castellanii str. Neff	14919816
ACA1_236050	CDS	ACA1_236050	NW_004457518.1	389589	390596	D	encoded by transcript ACA1_236050A; uncharacterized protein	join(389589..389789,390088..390192,390306..390387,390505..390596)	Acanthamoeba castellanii str. Neff	14919817
ACA1_236060	CDS	ACA1_236060	NW_004457518.1	390800	394643	D	encoded by transcript ACA1_236060A; uncharacterized protein	join(390800..390991,391069..391537,391612..391665,391813..392014,392083..392164,392228..392452,392526..392730,392817..392957,393025..393229,393291..393597,393628..393798,393859..393896,393907..394002,394074..394339,394420..394643)	Acanthamoeba castellanii str. Neff	14919818
ACA1_236070	CDS	ACA1_236070	NW_004457518.1	394707	398455	D	encoded by transcript ACA1_236070A; GCC2 and GCC3 domain containing protein	join(394707..394833,394922..395285,395390..395470,395538..395770,395838..395967,396070..396272,396407..396453,396523..396792,396884..397048,397159..397331,397400..397675,397779..397918,398006..398131,398223..398455)	Acanthamoeba castellanii str. Neff	14919819
ACA1_236080	CDS	ACA1_236080	NW_004457518.1	399547	400523	R	encoded by transcript ACA1_236080A; variant sh3 domain containing protein	complement(join(399547..399638,399713..400043,400152..400523))	Acanthamoeba castellanii str. Neff	14919820
ACA1_236090	CDS	ACA1_236090	NW_004457518.1	402113	404110	R	encoded by transcript ACA1_236090A; PUL domain containing protein	complement(join(402113..402247,402315..402368,402451..402523,402614..402798,402922..403194,403326..403415,403503..403807,403960..404110))	Acanthamoeba castellanii str. Neff	14919821
ACA1_236100	CDS	ACA1_236100	NW_004457518.1	404298	405718	R	encoded by transcript ACA1_236100A; OTUlike cysteine protease protein	complement(join(404298..404422,404520..404570,404639..405194,405369..405488,405572..405718))	Acanthamoeba castellanii str. Neff	14919822
ACA1_236110	CDS	ACA1_236110	NW_004457518.1	405938	408864	R	encoded by transcript ACA1_236110A; protein phosphatase 2C domain containing protein	complement(join(405938..406081,406195..406447,406543..406745,406832..406948,406999..407408,407486..407563,407637..407774,407860..408205,408277..408617,408729..408864))	Acanthamoeba castellanii str. Neff	14919823
ACA1_236120	CDS	ACA1_236120	NW_004457518.1	409545	410284	D	encoded by transcript ACA1_236120A; uncharacterized protein	join(409545..409646,409716..409767,409835..409896,409979..410284)	Acanthamoeba castellanii str. Neff	14919824
ACA1_236130	CDS	ACA1_236130	NW_004457518.1	410518	412331	D	encoded by transcript ACA1_236130A; uncharacterized protein	join(410518..410601,410711..410808,411067..411185,411281..411309,411404..411490,411619..411714,411768..411969,412059..412143,412250..412331)	Acanthamoeba castellanii str. Neff	14919825
ACA1_236140	CDS	ACA1_236140	NW_004457518.1	412622	413758	R	encoded by transcript ACA1_236140A; spliceosomal protein, putative	complement(join(412622..413185,413267..413541,413647..413758))	Acanthamoeba castellanii str. Neff	14919826
ACA1_236150	CDS	ACA1_236150	NW_004457518.1	414435	419974	R	encoded by transcript ACA1_236150A; DNA-directed DNA polymerase	complement(join(414435..415327,415420..415567,415705..416024,416109..416236,416322..417420,417493..418011,418112..418217,418330..418419,418447..418505,418572..418665,418759..419001,419117..419356,419474..419563,419747..419974))	Acanthamoeba castellanii str. Neff	14919827
ACA1_236160	CDS	ACA1_236160	NW_004457518.1	420230	422905	R	encoded by transcript ACA1_236160A; type II CPD DNA photolyase	complement(join(420230..420484,420562..420657,420735..420826,420900..421026,421111..421186,421250..421413,421497..421565,421632..421724,421794..421954,422031..422126,422198..422418,422488..422563,422638..422823,422884..422905))	Acanthamoeba castellanii str. Neff	14919828
ACA1_236170	CDS	ACA1_236170	NW_004457518.1	423209	424435	R	encoded by transcript ACA1_236170A; GTPase activating Rap/RanGAP domainlike 3, putative	complement(join(423209..423327,423412..423528,423626..423650,423802..423909,423999..424150,424215..424268,424333..424435))	Acanthamoeba castellanii str. Neff	14919829
ACA1_236180	CDS	ACA1_236180	NW_004457518.1	425064	427684	R	encoded by transcript ACA1_236180A; uncharacterized protein	complement(join(425064..425683,425778..426315,426425..426455,426475..426748,426845..427310,427634..427684))	Acanthamoeba castellanii str. Neff	14919830
ACA1_236290	CDS	ACA1_236290	NW_004457518.1	428107	429679	D	encoded by transcript ACA1_236290A; mitochondrial carnitineacylcarnitine carrier protein	join(428107..428184,428481..428609,428688..428780,428901..428974,429062..429170,429234..429339,429422..429515,429577..429679)	Acanthamoeba castellanii str. Neff	14919831
ACA1_236300	CDS	ACA1_236300	NW_004457518.1	429903	430576	D	encoded by transcript ACA1_236300A; uncharacterized protein	join(429903..429954,430044..430144,430247..430576)	Acanthamoeba castellanii str. Neff	14919832
ACA1_236310	CDS	ACA1_236310	NW_004457518.1	431195	437226	D	encoded by transcript ACA1_236310A; calpain family cysteine protease domain containing protein	join(431195..431375,431476..431604,431685..431751,431859..431965,432054..432180,432296..432437,432544..432575,432626..432632,432650..432721,432808..432936,433030..433106,433180..433301,433383..433454,433524..433678,433811..433921,433998..434061,434139..434210,434304..434393,434467..434540,434619..434733,434827..434955,435064..435181,435264..435328,435460..435633,435729..435803,435862..435941,436018..436276,436354..436425,436507..436664,436753..437023,437093..437226)	Acanthamoeba castellanii str. Neff	14919833
ACA1_236320	CDS	ACA1_236320	NW_004457518.1	437502	439922	D	encoded by transcript ACA1_236320A; cytochrome p450 superfamily protein	join(437502..437574,437701..437812,437982..438056,438162..438243,438317..438469,438580..438746,438899..439077,439164..439544,439660..439786,439871..439922)	Acanthamoeba castellanii str. Neff	14919834
ACA1_236330	CDS	ACA1_236330	NW_004457518.1	440149	441150	D	encoded by transcript ACA1_236330A; HMG (high mobility group) box domain containing protein	join(440149..440790,440863..441150)	Acanthamoeba castellanii str. Neff	14919835
ACA1_236340	CDS	ACA1_236340	NW_004457518.1	441241	442213	R	encoded by transcript ACA1_236340A; uncharacterized protein	complement(join(441241..441290,441374..441442,441555..441699,441809..441923,442032..442213))	Acanthamoeba castellanii str. Neff	14919836
ACA1_236350	CDS	ACA1_236350	NW_004457518.1	442365	444110	D	encoded by transcript ACA1_236350A; peptidase, M20/M25/M40 superfamily protein	join(442365..442541,442788..442899,442979..443098,443205..443297,443381..443560,443674..443821,443930..444110)	Acanthamoeba castellanii str. Neff	14919837
ACA1_236360	CDS	ACA1_236360	NW_004457518.1	444322	445238	R	encoded by transcript ACA1_236360A; AP3 complex beta3B subunit	complement(join(444322..444489,444618..444748,444851..445079,445173..445238))	Acanthamoeba castellanii str. Neff	14919838
ACA1_236470	CDS	ACA1_236470	NW_004457518.1	451247	451818	R	encoded by transcript ACA1_236470A; uncharacterized protein	complement(join(451247..451615,451783..451818))	Acanthamoeba castellanii str. Neff	14919839
ACA1_236480	CDS	ACA1_236480	NW_004457518.1	453025	453588	R	encoded by transcript ACA1_236480A; ribosomal L28e protein family	complement(join(453025..453463,453563..453588))	Acanthamoeba castellanii str. Neff	14919840
ACA1_236490	CDS	ACA1_236490	NW_004457518.1	453905	454474	D	encoded by transcript ACA1_236490A; uncharacterized protein	453905..454474	Acanthamoeba castellanii str. Neff	14919841
ACA1_236500	CDS	ACA1_236500	NW_004457518.1	454684	456241	R	encoded by transcript ACA1_236500A; UBA/TSN domain containing protein	complement(join(454684..455055,455144..455257,455341..455487,455557..455903,456133..456241))	Acanthamoeba castellanii str. Neff	14919842
ACA1_236510	CDS	ACA1_236510	NW_004457518.1	456485	459637	D	encoded by transcript ACA1_236510A; KH domain containing protein	join(456485..456516,456727..457024,457127..457255,457364..457555,457665..457766,457860..457994,458089..458226,458339..458836,458919..458997,459092..459151,459236..459424,459498..459637)	Acanthamoeba castellanii str. Neff	14919843
ACA1_236520	CDS	ACA1_236520	NW_004457518.1	460465	460848	R	encoded by transcript ACA1_236520A; uncharacterized protein	complement(join(460465..460525,460617..460734,460803..460848))	Acanthamoeba castellanii str. Neff	14919844
ACA1_236630	CDS	ACA1_236630	NW_004457518.1	462844	465279	R	encoded by transcript ACA1_236630A; uncharacterized protein	complement(join(462844..462944,463029..463130,463223..463307,463396..463524,463614..463705,463787..464018,464126..464249,464351..464466,464557..464582,464762..464809,465045..465279))	Acanthamoeba castellanii str. Neff	14919845
ACA1_236640	CDS	ACA1_236640	NW_004457518.1	465550	465986	D	encoded by transcript ACA1_236640A; uncharacterized protein	join(465550..465574,465802..465986)	Acanthamoeba castellanii str. Neff	14919846
ACA1_236650	CDS	ACA1_236650	NW_004457518.1	466303	469355	D	encoded by transcript ACA1_236650A; Calciumbinding mitochondrial carrier protein	join(466303..466578,466804..467092,467161..467300,467416..468216,468303..468489,468761..469038,469125..469355)	Acanthamoeba castellanii str. Neff	14919847
ACA1_236660	CDS	ACA1_236660	NW_004457518.1	469507	471198	R	encoded by transcript ACA1_236660A; Fbox domain containing protein	complement(join(469507..469789,469876..469955,470035..470115,470271..470425,470489..470635,470719..470875,470976..471093,471164..471198))	Acanthamoeba castellanii str. Neff	14919848
ACA1_236670	CDS	ACA1_236670	NW_004457518.1	471467	471997	D	encoded by transcript ACA1_236670A; universal stress protein (USP) family protein	join(471467..471583,471710..471997)	Acanthamoeba castellanii str. Neff	14919849
ACA1_236680	CDS	ACA1_236680	NW_004457518.1	472339	473101	D	encoded by transcript ACA1_236680A; uncharacterized protein	join(472339..472553,472640..472824,472908..473101)	Acanthamoeba castellanii str. Neff	14919850
ACA1_236690	CDS	ACA1_236690	NW_004457518.1	473221	474211	D	encoded by transcript ACA1_236690A; Peptidylprolyl cis-trans isomerase	join(473221..473328,473518..473572,473646..473755,473832..473904,473994..474211)	Acanthamoeba castellanii str. Neff	14919851
ACA1_236700	CDS	ACA1_236700	NW_004457518.1	474909	477252	R	encoded by transcript ACA1_236700A; LIM domain containing protein	complement(join(474909..475026,475057..475170,475259..477252))	Acanthamoeba castellanii str. Neff	14919852
ACA1_236710	CDS	ACA1_236710	NW_004457518.1	475409	476823	D	encoded by transcript ACA1_236710A; uncharacterized protein	475409..>476823	Acanthamoeba castellanii str. Neff	14919854
ACA1_236820	CDS	ACA1_236820	NW_004457518.1	477531	478336	D	encoded by transcript ACA1_236820A; uncharacterized protein	join(<477531..477990,478116..478336)	Acanthamoeba castellanii str. Neff	14919853
ACA1_236930	CDS	ACA1_236930	NW_004457518.1	484924	485289	D	encoded by transcript ACA1_236930A; uncharacterized protein	484924..485289	Acanthamoeba castellanii str. Neff	14919855
ACA1_236940	CDS	ACA1_236940	NW_004457518.1	485708	486744	R	encoded by transcript ACA1_236940A; uncharacterized protein	complement(join(485708..485814,485892..486009,486116..486169,486263..486328,486436..486531,486646..>486744))	Acanthamoeba castellanii str. Neff	14919856
ACA1_237050	CDS	ACA1_237050	NW_004457518.1	492164	494452	D	encoded by transcript ACA1_237050A; leucine rich repeat domain containing protein	join(492164..492192,492218..492467,492641..492704,492785..492909,493058..493090,493223..493343,493433..493564,493649..493719,493796..493912,493986..494159,494222..494452)	Acanthamoeba castellanii str. Neff	14919857
ACA1_237160	CDS	ACA1_237160	NW_004457518.1	495260	497932	R	encoded by transcript ACA1_237160A; RhoGEF domain containing protein	complement(join(495260..495426,495505..495666,495771..495846,495956..496068,496165..496234,496380..496550,496768..496971,497065..497235,497403..497506,497585..497846,497909..497932))	Acanthamoeba castellanii str. Neff	14919858
ACA1_237270	CDS	ACA1_237270	NW_004457518.1	500118	500861	D	encoded by transcript ACA1_237270A; RNA 2'phosphotransferase, Tpt1/KptA domain containing protein	join(500118..500186,500282..500332,500413..500533,500610..500666,500740..500861)	Acanthamoeba castellanii str. Neff	14919859
ACA1_237280	CDS	ACA1_237280	NW_004457518.1	500909	502429	R	encoded by transcript ACA1_237280A; alkylated DNA repair protein AlkB	complement(join(500909..501206,501291..501381,501455..501482,501560..501695,501928..502040,502123..502176,502245..502320,502386..502429))	Acanthamoeba castellanii str. Neff	14919860
ACA1_237290	CDS	ACA1_237290	NW_004457518.1	502616	503747	R	encoded by transcript ACA1_237290A; uncharacterized protein	complement(join(502616..502765,502886..503035,503272..503287,503358..503415,503477..503747))	Acanthamoeba castellanii str. Neff	14919861
ACA1_237410	CDS	ACA1_237410	NW_004457518.1	504472	504874	R	encoded by transcript ACA1_237410A; uncharacterized protein	complement(join(504472..504588,504669..504722,504791..504874))	Acanthamoeba castellanii str. Neff	14919863
ACA1_237430	CDS	ACA1_237430	NW_004457518.1	509265	510016	D	encoded by transcript ACA1_237430A; uncharacterized protein	join(509265..509404,509490..509607,509692..509756,509832..509865,509939..510016)	Acanthamoeba castellanii str. Neff	14919865
ACA1_237440	CDS	ACA1_237440	NW_004457518.1	510084	511189	R	encoded by transcript ACA1_237440A; peptidylprolyl cis-trans isomerase, cyclophilin-type domain containing protein	complement(join(510084..510159,510231..510345,510423..510548,510623..510767,510878..511003,511058..511189))	Acanthamoeba castellanii str. Neff	14919866
ACA1_237550	CDS	ACA1_237550	NW_004457518.1	515718	516296	D	encoded by transcript ACA1_237550A; uncharacterized protein	515718..516296	Acanthamoeba castellanii str. Neff	14919867
ACA1_237560	CDS	ACA1_237560	NW_004457518.1	516482	517563	D	encoded by transcript ACA1_237560A; R3H domain containing protein	join(516482..516796,516912..516983,517070..517181,517347..517420,517498..>517563)	Acanthamoeba castellanii str. Neff	14919868
ACA1_036870	CDS	ACA1_036870	NW_004457516.1	3862	4151	R	encoded by transcript ACA1_036870A; uncharacterized protein	complement(<3862..4151)	Acanthamoeba castellanii str. Neff	14919666
ACA1_036880	CDS	ACA1_036880	NW_004457516.1	4438	5835	R	encoded by transcript ACA1_036880A; uncharacterized protein	complement(join(4438..4611,4691..4918,4996..5195,5285..5608,5682..5835))	Acanthamoeba castellanii str. Neff	14919697
ACA1_036890	CDS	ACA1_036890	NW_004457516.1	6184	7411	D	encoded by transcript ACA1_036890A; Ras subfamily protein	join(6184..6275,6341..6413,6499..6541,6604..6668,6808..6844,6933..7021,7112..7210,7286..7411)	Acanthamoeba castellanii str. Neff	14919685
ACA1_036900	CDS	ACA1_036900	NW_004457516.1	7838	9665	D	encoded by transcript ACA1_036900A; UDPglucose pyrophosphorylase 2 isoform, putative	join(7838..8314,8438..8771,8848..9410,9498..9665)	Acanthamoeba castellanii str. Neff	14919686
ACA1_036910	CDS	ACA1_036910	NW_004457516.1	9986	11085	D	encoded by transcript ACA1_036910A; SAM domain (Sterile alpha motif) domain containing protein	join(9986..10170,10302..10767,10960..11085)	Acanthamoeba castellanii str. Neff	14919687
ACA1_036920	CDS	ACA1_036920	NW_004457516.1	11772	14497	R	encoded by transcript ACA1_036920A; rhodaneselike domain containing protein	complement(join(11772..11930,12015..12126,12243..12370,12470..12568,12661..12732,12841..13035,13104..13212,13347..13710,13831..14497))	Acanthamoeba castellanii str. Neff	14919688
ACA1_036930	CDS	ACA1_036930	NW_004457516.1	15202	16726	R	encoded by transcript ACA1_036930A; dehydrodolichyl diphosphate synthase	complement(join(15202..15438,15521..15628,15717..15831,15902..15962,16063..16187,16273..16415,16490..16726))	Acanthamoeba castellanii str. Neff	14919689
ACA1_036940	CDS	ACA1_036940	NW_004457516.1	17120	19080	D	encoded by transcript ACA1_036940A; uncharacterized protein	join(17120..18234,18357..19080)	Acanthamoeba castellanii str. Neff	14919690
ACA1_036950	CDS	ACA1_036950	NW_004457516.1	19318	21279	D	encoded by transcript ACA1_036950A; R3H domain containing protein	join(19318..19449,19522..21279)	Acanthamoeba castellanii str. Neff	14919691
ACA1_036960	CDS	ACA1_036960	NW_004457516.1	21482	28063	D	encoded by transcript ACA1_036960A; elongator complex protein 1, putative	join(21482..21640,21708..21833,21940..22095,22183..22285,22386..22476,22539..22628,22743..22854,22962..23101,23192..23289,23384..23562,23638..23839,23933..24061,24212..24315,24410..24566,24653..24765,24881..25045,25169..25346,25444..25602,25697..25796,25936..26142,26234..26403,26546..26715,26819..26907,26991..27178,27254..27514,27653..27825,27953..28063)	Acanthamoeba castellanii str. Neff	14919692
ACA1_036970	CDS	ACA1_036970	NW_004457516.1	28181	28556	R	encoded by transcript ACA1_036970A; uncharacterized protein	complement(join(28181..28257,28343..28556))	Acanthamoeba castellanii str. Neff	14919693
ACA1_036980	CDS	ACA1_036980	NW_004457516.1	28767	30107	R	encoded by transcript ACA1_036980A; uncharacterized protein	complement(join(28767..28803,28814..29025,29100..29250,29314..29438,29529..29560,29645..29701,29774..30107))	Acanthamoeba castellanii str. Neff	14919694
ACA1_036990	CDS	ACA1_036990	NW_004457516.1	30351	33036	R	encoded by transcript ACA1_036990A; peptidase M20, putative	complement(join(30351..30409,30510..30551,30628..30729,30812..30895,30973..31024,31117..31220,31315..31376,31462..31523,31628..31796,31910..32150,32244..32289,32382..32414,32509..32608,32691..32758,32824..33036))	Acanthamoeba castellanii str. Neff	14919695
ACA1_037000	CDS	ACA1_037000	NW_004457516.1	33212	33406	D	encoded by transcript ACA1_037000A; uncharacterized protein	33212..33406	Acanthamoeba castellanii str. Neff	14919696
ACA1_037010	CDS	ACA1_037010	NW_004457516.1	33660	34675	R	encoded by transcript ACA1_037010A; Lglutamine synthetase	complement(join(33660..34495,34576..34675))	Acanthamoeba castellanii str. Neff	14919667
ACA1_037020	CDS	ACA1_037020	NW_004457516.1	34745	36526	R	encoded by transcript ACA1_037020A; Glutamine synthetase	complement(join(34745..35125,35206..35420,35487..35607,35714..35974,36113..36526))	Acanthamoeba castellanii str. Neff	14919668
ACA1_037030	CDS	ACA1_037030	NW_004457516.1	37195	38418	R	encoded by transcript ACA1_037030A; uncharacterized protein	complement(join(37195..37320,37392..37541,37634..37736,37820..37981,37994..38174,38246..38320,38388..38418))	Acanthamoeba castellanii str. Neff	14919669
ACA1_037040	CDS	ACA1_037040	NW_004457516.1	38844	39082	R	encoded by transcript ACA1_037040A; uncharacterized protein	complement(join(38844..38954,39017..39082))	Acanthamoeba castellanii str. Neff	14919670
ACA1_037050	CDS	ACA1_037050	NW_004457516.1	39616	40473	R	encoded by transcript ACA1_037050A; uncharacterized protein	complement(39616..40473)	Acanthamoeba castellanii str. Neff	14919671
ACA1_037060	CDS	ACA1_037060	NW_004457516.1	41157	46747	D	encoded by transcript ACA1_037060A; DIL domain containing protein	join(41157..41290,41380..41764,41846..41893,41918..41944,42040..42494,42517..43780,43798..43983,44018..45281,45353..45468,45538..46109,46172..46507,46609..46747)	Acanthamoeba castellanii str. Neff	14919672
ACA1_037070	CDS	ACA1_037070	NW_004457516.1	46842	47967	R	encoded by transcript ACA1_037070A; dienelactone hydrolase family protein	complement(join(46842..47027,47122..47264,47389..47522,47627..47724,47794..47967))	Acanthamoeba castellanii str. Neff	14919673
ACA1_037080	CDS	ACA1_037080	NW_004457516.1	48330	50429	D	encoded by transcript ACA1_037080A; ABC transporter, ATPbinding domain containing protein	48330..50429	Acanthamoeba castellanii str. Neff	14919674
ACA1_037090	CDS	ACA1_037090	NW_004457516.1	50966	56959	D	encoded by transcript ACA1_037090A; Ankyrin repeat containing protein	join(50966..51485,51598..51719,51806..51871,51954..52104,52190..52259,52356..52518,52607..52754,52823..52940,53045..53103,53213..53412,53530..53605,53706..53807,53882..54092,54265..54401,54469..54900,54986..55155,55252..55401,55521..55587,55731..55834,55915..56152,56236..56430,56501..56654,56719..56959)	Acanthamoeba castellanii str. Neff	14919675
ACA1_037100	CDS	ACA1_037100	NW_004457516.1	57074	58631	R	encoded by transcript ACA1_037100A; 3methyl-2-oxobutanoate hydroxymethyltransferase	complement(join(57074..57246,57348..57521,57603..57674,57761..57824,57900..58154,58260..58631))	Acanthamoeba castellanii str. Neff	14919676
ACA1_037110	CDS	ACA1_037110	NW_004457516.1	58861	63373	R	encoded by transcript ACA1_037110A; uncharacterized protein	complement(join(58861..59011,59107..59260,59347..59564,59656..59975,60043..60280,60347..60674,60755..60842,61218..61441,61519..61702,61795..61908,62245..62361,62652..62727,62800..62909,63017..63183,63271..63373))	Acanthamoeba castellanii str. Neff	14919677
ACA1_037120	CDS	ACA1_037120	NW_004457516.1	63607	64623	D	encoded by transcript ACA1_037120A; COMM domain containing protein 2, putative	join(63607..63751,63843..63918,64006..64087,64165..64263,64362..64431,64499..64623)	Acanthamoeba castellanii str. Neff	14919678
ACA1_037130	CDS	ACA1_037130	NW_004457516.1	64712	66037	R	encoded by transcript ACA1_037130A; uncharacterized protein	complement(64712..66037)	Acanthamoeba castellanii str. Neff	14919679
ACA1_037140	CDS	ACA1_037140	NW_004457516.1	66140	67480	D	encoded by transcript ACA1_037140A; uncharacterized protein	join(66140..66283,66296..67480)	Acanthamoeba castellanii str. Neff	14919680
ACA1_037150	CDS	ACA1_037150	NW_004457516.1	67655	68630	D	encoded by transcript ACA1_037150A; Oryza sativa (japonica cultivar-group) family protein, putative	join(67655..67912,68025..68306,68383..68462,68546..68630)	Acanthamoeba castellanii str. Neff	14919681
ACA1_037160	CDS	ACA1_037160	NW_004457516.1	68716	72841	R	encoded by transcript ACA1_037160A; leucine rich repeat domain containing protein	complement(join(68716..68867,68986..69145,69232..69333,69446..69535,69638..69766,69849..69965,70058..70183,70283..70384,70491..70631,70725..70827,70906..70969,71054..71129,71226..71380,71469..71658,71718..71812,71877..72262,72417..72549,72694..72841))	Acanthamoeba castellanii str. Neff	14919682
ACA1_037170	CDS	ACA1_037170	NW_004457516.1	73210	78162	D	encoded by transcript ACA1_037170A; uncharacterized protein	join(73210..73336,73358..73518,73595..73666,73733..73822,73917..73948,74073..74433,74695..74805,74874..74892,74956..75112,75195..75295,75391..75506,75586..75683,75775..75839,75915..76057,76184..76255,76332..76360,76448..76589,76667..76708,76783..76932,76998..77128,77196..77265,77358..77864,77920..78162)	Acanthamoeba castellanii str. Neff	14919683
ACA1_037180	CDS	ACA1_037180	NW_004457516.1	78230	78765	R	encoded by transcript ACA1_037180A; uncharacterized protein	complement(join(78230..78528,78618..78765))	Acanthamoeba castellanii str. Neff	14919684
ACA1_037190	CDS	ACA1_037190	NW_004457516.1	78897	80952	D	encoded by transcript ACA1_037190A; aminotransferase, class V, putative	join(78897..79051,79141..79244,79302..79401,79665..79804,79880..79992,80101..80442,80530..80647,80759..80952)	Acanthamoeba castellanii str. Neff	14919654
ACA1_037200	CDS	ACA1_037200	NW_004457516.1	81045	81555	D	encoded by transcript ACA1_037200A; uncharacterized protein	join(81045..81185,81328..81555)	Acanthamoeba castellanii str. Neff	14919655
ACA1_037210	CDS	ACA1_037210	NW_004457516.1	81653	84102	R	encoded by transcript ACA1_037210A; uncharacterized protein	complement(join(81653..81862,81934..82549,82842..82972,83061..83201,83414..83581,83698..83806,83981..84102))	Acanthamoeba castellanii str. Neff	14919656
ACA1_037220	CDS	ACA1_037220	NW_004457516.1	84348	86075	R	encoded by transcript ACA1_037220A; uncharacterized protein	complement(join(84348..84473,84558..84691,84782..84882,84987..85054,85123..85221,85678..85785,85807..85899,85986..86075))	Acanthamoeba castellanii str. Neff	14919657
ACA1_037430	CDS	ACA1_037430	NW_004457516.1	86956	88670	R	encoded by transcript ACA1_037430A; uncharacterized protein	complement(join(86956..87143,87235..87670,87762..87890,88015..88140,88242..88322,88391..88423,88578..88670))	Acanthamoeba castellanii str. Neff	14919658
ACA1_037440	CDS	ACA1_037440	NW_004457516.1	88822	92296	R	encoded by transcript ACA1_037440A; uncharacterized protein	complement(join(88822..88879,88971..89081,89172..89308,89525..89626,89720..89824,89927..90007,90097..90186,90281..90398,90503..90611,90683..90773,90861..90987,91080..91168,91279..91369,91660..91678,91764..91935,92000..92296))	Acanthamoeba castellanii str. Neff	14919659
ACA1_037450	CDS	ACA1_037450	NW_004457516.1	93307	93956	D	encoded by transcript ACA1_037450A; uncharacterized protein	join(93307..93445,93507..93548,93622..93782,93846..93956)	Acanthamoeba castellanii str. Neff	14919660
ACA1_037460	CDS	ACA1_037460	NW_004457516.1	94014	94551	R	encoded by transcript ACA1_037460A; ubiquinolcytochrome c reductase complex 14 kDa protein	complement(join(94014..94045,94123..94377,94470..94551))	Acanthamoeba castellanii str. Neff	14919661
ACA1_037470	CDS	ACA1_037470	NW_004457516.1	95076	97625	R	encoded by transcript ACA1_037470A; RhoGAP domain containing protein	complement(join(95076..95197,95289..95494,95563..95715,95800..96938,97055..97343,97552..97625))	Acanthamoeba castellanii str. Neff	14919662
ACA1_037480	CDS	ACA1_037480	NW_004457516.1	97985	100616	R	encoded by transcript ACA1_037480A; homoserine Oacetyltransferase	complement(join(97985..98148,98254..98328,98437..98513,98602..98650,98755..98874,98969..99033,99121..99193,99275..99349,99457..99534,99682..99742,99849..99943,100011..100048,100121..100206,100294..100391,100532..100616))	Acanthamoeba castellanii str. Neff	14919663
ACA1_037490	CDS	ACA1_037490	NW_004457516.1	100985	103358	R	encoded by transcript ACA1_037490A; uncharacterized protein	complement(join(100985..101295,101320..102390,102470..102610,102719..102877,103023..103144,103258..103358))	Acanthamoeba castellanii str. Neff	14919664
ACA1_037500	CDS	ACA1_037500	NW_004457516.1	103779	104342	R	encoded by transcript ACA1_037500A; uncharacterized protein	complement(103779..104342)	Acanthamoeba castellanii str. Neff	14919665
ACA1_166550	CDS	ACA1_166550	NW_004457514.1	49	436	R	encoded by transcript ACA1_166550A; uncharacterized protein	complement(join(<49..225,317..436))	Acanthamoeba castellanii str. Neff	14919642
ACA1_166560	CDS	ACA1_166560	NW_004457514.1	2326	4701	R	encoded by transcript ACA1_166560A; endoribonuclease L-PSP protein	complement(join(2326..2411,2577..2702,2771..3169,3249..3378,3447..3549,3615..3745,3822..3897,3968..4097,4193..4294,4359..4506,4633..>4701))	Acanthamoeba castellanii str. Neff	14919640
ACA1_166770	CDS	ACA1_166770	NW_004457514.1	8462	9489	R	encoded by transcript ACA1_166770A; uncharacterized protein	complement(join(8462..8786,8879..9012,9121..9240,9319..9489))	Acanthamoeba castellanii str. Neff	14919641
ACA1_166780	CDS	ACA1_166780	NW_004457514.1	10503	11060	D	encoded by transcript ACA1_166780A; uncharacterized protein	join(10503..10799,10851..10883,10956..11060)	Acanthamoeba castellanii str. Neff	14919643
ACA1_166900	CDS	ACA1_166900	NW_004457514.1	22032	25533	R	encoded by transcript ACA1_166900A; 'chromo' (CHRromatin Organization MOdifier) domain containing protein	complement(join(22032..23420,23521..23691,23789..23902,23997..24090,24187..24362,24499..24678,24791..24853,24967..25533))	Acanthamoeba castellanii str. Neff	14919645
ACA1_166910	CDS	ACA1_166910	NW_004457514.1	25796	27569	R	encoded by transcript ACA1_166910A; amine oxidase family protein	complement(join(25796..26499,26560..26789,26864..26933,27003..27215,27314..27569))	Acanthamoeba castellanii str. Neff	14919646
ACA1_166930	CDS	ACA1_166930	NW_004457514.1	30255	31900	R	encoded by transcript ACA1_166930A; RAD51, putative	complement(join(30255..30494,30613..30744,30813..30962,31027..31097,31176..31246,31316..31349,31421..31540,31610..31708,31771..31900))	Acanthamoeba castellanii str. Neff	14919648
ACA1_166940	CDS	ACA1_166940	NW_004457514.1	32021	36402	R	encoded by transcript ACA1_166940A; GTPaseactivator protein for Ras-like GTPase	complement(join(32021..32227,32310..32615,32694..32834,32937..33044,33074..33232,33326..33502,33584..33676,33765..33981,34094..34320,34409..34560,34660..34774,34872..35104,35197..35371,35472..35612,35685..35854,35946..36017,36090..36137,36300..36402))	Acanthamoeba castellanii str. Neff	14919649
ACA1_166960	CDS	ACA1_166960	NW_004457514.1	39043	40271	D	encoded by transcript ACA1_166960A; TBC domain containing protein	join(39043..39283,39385..39530,39625..39784,39870..40008,40100..40271)	Acanthamoeba castellanii str. Neff	14919651
ACA1_166970	CDS	ACA1_166970	NW_004457514.1	40414	43556	D	encoded by transcript ACA1_166970A; Poly(ADP-ribose) polymerase catalytic domain containing protein	join(40414..40498,40575..40623,40695..40806,40883..41059,41161..41403,41522..41804,41877..41979,42078..42155,42237..42293,42401..42511,42612..42753,42840..42899,42987..43041,43130..43145,43235..43365,43453..43556)	Acanthamoeba castellanii str. Neff	14919652
ACA1_166980	CDS	ACA1_166980	NW_004457514.1	43713	47674	R	encoded by transcript ACA1_166980A; uncharacterized protein	complement(join(43713..43793,43897..44465,44551..44635,44753..44911,45041..45324,45426..45496,45577..45646,45738..45802,45914..45969,46082..46702,47396..47674))	Acanthamoeba castellanii str. Neff	14919653
ACA1_166990	CDS	ACA1_166990	NW_004457514.1	48526	49110	R	encoded by transcript ACA1_166990A; uncharacterized protein	complement(join(48526..48683,48744..49110))	Acanthamoeba castellanii str. Neff	14919626
ACA1_167000	CDS	ACA1_167000	NW_004457514.1	49242	49927	D	encoded by transcript ACA1_167000A; uncharacterized protein	join(49242..49434,49523..49644,49799..49927)	Acanthamoeba castellanii str. Neff	14919627
ACA1_167010	CDS	ACA1_167010	NW_004457514.1	50383	54320	D	encoded by transcript ACA1_167010A; acylCoA synthetase	join(50383..50902,51193..51318,51384..51646,51780..51952,52038..52144,52222..52309,52375..52507,52584..52710,52792..52914,52938..53063,53148..53250,53329..53401,53473..53540,53610..53701,53780..53934,54006..54320)	Acanthamoeba castellanii str. Neff	14919628
ACA1_167020	CDS	ACA1_167020	NW_004457514.1	54547	58817	D	encoded by transcript ACA1_167020A; transporter, cation channel family protein	join(54547..54764,54833..54950,55061..55189,55282..55499,55597..55686,55769..55895,55973..56119,56217..56265,56368..56512,56595..56694,56785..56900,57005..57078,57147..57205,57415..57595,57675..57765,57857..57955,58037..58817)	Acanthamoeba castellanii str. Neff	14919629
ACA1_167030	CDS	ACA1_167030	NW_004457514.1	59305	59923	D	encoded by transcript ACA1_167030A; uncharacterized protein	join(59305..59432,59503..59624,59739..59923)	Acanthamoeba castellanii str. Neff	14919630
ACA1_167040	CDS	ACA1_167040	NW_004457514.1	60127	61438	D	encoded by transcript ACA1_167040A; GNS1/SUR4 family protein	join(60127..60474,60607..60663,60748..60858,60983..61130,61248..61438)	Acanthamoeba castellanii str. Neff	14919631
ACA1_167050	CDS	ACA1_167050	NW_004457514.1	61553	63528	R	encoded by transcript ACA1_167050A; Ras subfamily protein	complement(join(61553..61752,61811..61957,62046..62360,62561..62693,62803..63077,63164..63243,63305..63402,63472..63528))	Acanthamoeba castellanii str. Neff	14919632
ACA1_167060	CDS	ACA1_167060	NW_004457514.1	63647	65738	R	encoded by transcript ACA1_167060A; FAD binding domain containing protein	complement(join(63647..63815,63892..63979,64050..64270,64297..64713,64729..64757,64836..64989,65029..65210,65346..65738))	Acanthamoeba castellanii str. Neff	14919633
ACA1_167070	CDS	ACA1_167070	NW_004457514.1	65845	72774	R	encoded by transcript ACA1_167070A; clathrin heavy chain, putative	complement(join(65845..66780,67006..67313,67398..67716,67786..68000,68230..68835,69042..69281,69348..69474,69666..69776,69995..70411,70598..70828,70905..72148,72207..72356,72425..72632,72736..72774))	Acanthamoeba castellanii str. Neff	14919634
ACA1_167080	CDS	ACA1_167080	NW_004457514.1	75138	75938	D	encoded by transcript ACA1_167080A; uncharacterized protein	join(75138..75260,75331..75370,75445..75602,75668..75743,75820..75938)	Acanthamoeba castellanii str. Neff	14919635
ACA1_167090	CDS	ACA1_167090	NW_004457514.1	76081	77042	R	encoded by transcript ACA1_167090A; RUN domain containing protein	complement(join(76081..76323,76395..76461,76518..76743,76799..76883,76953..77042))	Acanthamoeba castellanii str. Neff	14919636
ACA1_167100	CDS	ACA1_167100	NW_004457514.1	78288	79824	D	encoded by transcript ACA1_167100A; uncharacterized protein	join(78288..78345,78422..79563,79648..79824)	Acanthamoeba castellanii str. Neff	14919637
ACA1_167110	CDS	ACA1_167110	NW_004457514.1	80008	82202	D	encoded by transcript ACA1_167110A; uncharacterized protein	join(80008..81206,81286..81465,81575..81727,81796..81898,82006..82090,82144..82202)	Acanthamoeba castellanii str. Neff	14919638
ACA1_167120	CDS	ACA1_167120	NW_004457514.1	82877	83225	D	encoded by transcript ACA1_167120A; uncharacterized protein	join(82877..82999,83070..83225)	Acanthamoeba castellanii str. Neff	14919639
ACA1_150200	CDS	ACA1_150200	NW_004457511.1	40	380	R	encoded by transcript ACA1_150200A; uncharacterized protein	complement(join(<40..169,265..380))	Acanthamoeba castellanii str. Neff	14919625
ACA1_150310	CDS	ACA1_150310	NW_004457511.1	2901	4975	R	encoded by transcript ACA1_150310A; uncharacterized protein	complement(join(2901..3633,3705..3790,3810..3856,3868..3940,4068..4135,4259..4397,4491..4566,4674..4975))	Acanthamoeba castellanii str. Neff	14919585
ACA1_150320	CDS	ACA1_150320	NW_004457511.1	5143	6619	D	encoded by transcript ACA1_150320A; uncharacterized protein	join(5143..5753,5830..5992,6102..6221,6298..6563,6604..6619)	Acanthamoeba castellanii str. Neff	14919586
ACA1_150430	CDS	ACA1_150430	NW_004457511.1	6866	9035	D	encoded by transcript ACA1_150430A; serine/threonine protein kinase	join(6866..6928,7012..7147,7235..7370,7442..7689,7773..8032,8109..8225,8305..8401,8471..8532,8631..8833,8900..>9035)	Acanthamoeba castellanii str. Neff	14919587
ACA1_150540	CDS	ACA1_150540	NW_004457511.1	11233	11656	D	encoded by transcript ACA1_150540A; uncharacterized protein	join(<11233..11453,11557..11656)	Acanthamoeba castellanii str. Neff	14919588
ACA1_150550	CDS	ACA1_150550	NW_004457511.1	12154	12415	D	encoded by transcript ACA1_150550A; uncharacterized protein	join(12154..12163,12246..12415)	Acanthamoeba castellanii str. Neff	14919589
ACA1_150560	CDS	ACA1_150560	NW_004457511.1	12571	12942	R	encoded by transcript ACA1_150560A; uncharacterized protein	complement(join(12571..12630,12696..12758,12823..12942))	Acanthamoeba castellanii str. Neff	14919590
ACA1_150570	CDS	ACA1_150570	NW_004457511.1	13438	14440	R	encoded by transcript ACA1_150570A; rhodaneselike domain containing protein	complement(join(13438..13500,13564..13660,13792..13948,14044..14076,14287..14440))	Acanthamoeba castellanii str. Neff	14919591
ACA1_150580	CDS	ACA1_150580	NW_004457511.1	14843	16074	D	encoded by transcript ACA1_150580A; uncharacterized protein	join(14843..15040,15120..15871,15975..16074)	Acanthamoeba castellanii str. Neff	14919592
ACA1_150590	CDS	ACA1_150590	NW_004457511.1	16572	17604	D	encoded by transcript ACA1_150590A; vacuolar ATP synthase subunit F, putative	join(16572..16581,16667..16809,17293..17604)	Acanthamoeba castellanii str. Neff	14919593
ACA1_150700	CDS	ACA1_150700	NW_004457511.1	17843	19399	R	encoded by transcript ACA1_150700A; uncharacterized protein	complement(join(17843..18904,19076..19267,19325..19399))	Acanthamoeba castellanii str. Neff	14919594
ACA1_150710	CDS	ACA1_150710	NW_004457511.1	19939	22778	D	encoded by transcript ACA1_150710A; uncharacterized protein	join(19939..20017,20074..20210,20271..20364,20422..20479,20559..20652,20751..22778)	Acanthamoeba castellanii str. Neff	14919595
ACA1_150720	CDS	ACA1_150720	NW_004457511.1	23689	26694	R	encoded by transcript ACA1_150720A; tetratricopeptide repeat domain containing protein	complement(join(23689..23763,23849..23953,24032..24138,24301..24390,24479..24601,24711..24813,24944..25002,25150..25244,25359..25474,25616..25722,25832..25878,26001..26078,26204..26273,26353..26505,26679..26694))	Acanthamoeba castellanii str. Neff	14919596
ACA1_150730	CDS	ACA1_150730	NW_004457511.1	26946	29627	D	encoded by transcript ACA1_150730A; uncharacterized protein	join(26946..27009,27170..27283,27430..27554,27649..27713,27815..29627)	Acanthamoeba castellanii str. Neff	14919597
ACA1_150740	CDS	ACA1_150740	NW_004457511.1	29815	31339	R	encoded by transcript ACA1_150740A; AN1like Zinc finger domain containing protein	complement(join(29815..30054,30172..30248,30317..30383,30444..30536,30661..30765,30858..31037,31111..31163,31249..31339))	Acanthamoeba castellanii str. Neff	14919598
ACA1_150950	CDS	ACA1_150950	NW_004457511.1	31527	35965	D	encoded by transcript ACA1_150950A; Exocyst complex component Sec6	join(31527..31777,31850..31920,32059..32129,32240..32346,32477..32541,32642..32698,32751..32882,33022..33128,33271..33380,33490..33602,33680..33798,33875..33997,34028..34196,34298..34364,34468..34574,34657..34732,34876..34978,35059..35369,35468..35691,35826..35965)	Acanthamoeba castellanii str. Neff	14919599
ACA1_150960	CDS	ACA1_150960	NW_004457511.1	36326	38137	D	encoded by transcript ACA1_150960A; BRCA1 C Terminus (BRCT) domain containing protein	join(36326..36454,36598..36741,36912..36948,37043..37247,37297..37400,37540..37788,37896..38137)	Acanthamoeba castellanii str. Neff	14919600
ACA1_151070	CDS	ACA1_151070	NW_004457511.1	43864	44784	D	encoded by transcript ACA1_151070A; actin subfamily protein	join(43864..44268,44338..44784)	Acanthamoeba castellanii str. Neff	14919601
ACA1_151080	CDS	ACA1_151080	NW_004457511.1	44781	47174	R	encoded by transcript ACA1_151080A; ribosomal protein L3, putative	complement(join(44781..44973,45068..45219,45307..45370,45511..45587,45748..45825,45967..46078,46172..46232,46352..46556,46675..46839,46876..46962,47001..47174))	Acanthamoeba castellanii str. Neff	14919602
ACA1_151090	CDS	ACA1_151090	NW_004457511.1	47469	50695	R	encoded by transcript ACA1_151090A; uncharacterized protein	complement(join(47469..47546,47636..47723,47886..48041,48173..48267,48486..48567,48667..48785,48998..49098,49218..49289,49423..49551,49643..49768,49917..49995,50168..50695))	Acanthamoeba castellanii str. Neff	14919603
ACA1_151100	CDS	ACA1_151100	NW_004457511.1	50801	57640	R	encoded by transcript ACA1_151100A; isoform 2 of serologically defined colon cancer antigen 1 family protein	complement(join(50801..51131,51299..51417,51571..51837,52165..52287,52483..52713,52913..53017,53162..53352,53510..53570,53655..53807,54011..54193,54432..54545,54661..54771,54846..54915,55087..55212,55307..55419,55552..55699,55808..56040,56197..56270,56457..56601,56789..56953,57081..57206,57413..57640))	Acanthamoeba castellanii str. Neff	14919604
ACA1_151110	CDS	ACA1_151110	NW_004457511.1	58010	63498	D	encoded by transcript ACA1_151110A; Sec23/Sec24 trunk domain containing protein	join(58010..58574,58705..58808,59025..59171,59385..59537,59702..59958,60058..60238,60407..60512,60618..60700,60835..60928,60952..60987,61066..61200,61346..61503,61649..61753,61873..62053,62170..62254,62367..62479,62591..62739,62881..63070,63175..63278,63394..63498)	Acanthamoeba castellanii str. Neff	14919605
ACA1_151230	CDS	ACA1_151230	NW_004457511.1	75000	75455	D	encoded by transcript ACA1_151230A; ribosomal protein S12, putative	75000..75455	Acanthamoeba castellanii str. Neff	14919607
ACA1_151240	CDS	ACA1_151240	NW_004457511.1	75785	80603	R	encoded by transcript ACA1_151240A; OTU family cysteine protease	complement(join(75785..75792,75827..75931,76063..78904,79099..79232,79345..79564,79773..79890,80122..80333,80517..80603))	Acanthamoeba castellanii str. Neff	14919608
ACA1_151250	CDS	ACA1_151250	NW_004457511.1	81053	82866	D	encoded by transcript ACA1_151250A; glycine cleavage Tprotein (aminomethyl transferase) domain containing protein	join(81053..81709,81862..82026,82160..82275,82360..82510,82619..82742,82766..82866)	Acanthamoeba castellanii str. Neff	14919609
ACA1_151260	CDS	ACA1_151260	NW_004457511.1	82961	85573	D	encoded by transcript ACA1_151260A; HMG-I and HMG-Y, DNA-binding domain containing protein	join(82961..83170,83291..83566,83727..83784,83886..84008,84148..84217,84262..84270,84320..85044,85175..85295,85450..85573)	Acanthamoeba castellanii str. Neff	14919610
ACA1_151270	CDS	ACA1_151270	NW_004457511.1	86677	88425	D	encoded by transcript ACA1_151270A; uncharacterized protein	join(86677..86883,86897..87631,87726..87851,87958..88425)	Acanthamoeba castellanii str. Neff	14919611
ACA1_151280	CDS	ACA1_151280	NW_004457511.1	88557	91308	D	encoded by transcript ACA1_151280A; Peroxin 3 (Pex3), putative	join(88557..88665,88733..88835,88969..89059,89266..89323,89534..89598,89761..89829,89993..90123,90313..90399,90510..90647,90802..90898,90994..91098,91195..91308)	Acanthamoeba castellanii str. Neff	14919612
ACA1_151290	CDS	ACA1_151290	NW_004457511.1	91403	95120	R	encoded by transcript ACA1_151290A; endonuclease/exonuclease/phosphatase family protein	complement(join(91403..91659,91831..91968,92147..92332,92429..93005,93122..93334,93467..93565,93640..93869,93969..94193,94339..94436,94522..94738,94821..94959,95088..95120))	Acanthamoeba castellanii str. Neff	14919613
ACA1_151300	CDS	ACA1_151300	NW_004457511.1	95575	96645	D	encoded by transcript ACA1_151300A; TIM21 protein	join(95575..95672,95778..95958,96131..96512,96599..96645)	Acanthamoeba castellanii str. Neff	14919614
ACA1_151310	CDS	ACA1_151310	NW_004457511.1	96939	99931	R	encoded by transcript ACA1_151310A; BTB/POZ domain containing protein	complement(join(96939..97235,97327..97453,97557..97715,97843..97900,98042..98114,98188..98483,98603..98633,98752..98831,99189..99267,99334..99401,99464..99510,99612..99931))	Acanthamoeba castellanii str. Neff	14919615
ACA1_151320	CDS	ACA1_151320	NW_004457511.1	100308	103573	R	encoded by transcript ACA1_151320A; protein phosphatase 2c-related protein	complement(join(100308..100415,100523..100615,100736..100848,101032..101065,101220..101380,101463..101605,101784..101944,102093..102232,102348..102512,102608..102682,102769..103003,103109..103326,103552..103573))	Acanthamoeba castellanii str. Neff	14919616
ACA1_151330	CDS	ACA1_151330	NW_004457511.1	103887	106961	R	encoded by transcript ACA1_151330A; Ser/Thr phosphatase family protein	complement(join(103887..104062,104153..104276,104351..104444,104536..104579,104648..104712,104794..104922,105014..105140,105237..105292,105401..105506,105630..105769,105874..106137,106221..106350,106467..106580,106706..106771,106857..106961))	Acanthamoeba castellanii str. Neff	14919617
ACA1_151340	CDS	ACA1_151340	NW_004457511.1	107494	108443	D	encoded by transcript ACA1_151340A; uncharacterized protein	join(107494..107789,107991..108061,108151..108443)	Acanthamoeba castellanii str. Neff	14919618
ACA1_151350	CDS	ACA1_151350	NW_004457511.1	108588	111790	D	encoded by transcript ACA1_151350A; WD domain, G-beta repeat-containing protein	join(108588..108749,109113..109148,109286..109372,109982..110069,110163..110242,110408..110493,110586..110631,110743..110877,111012..111131,111226..111331,111437..111600,111683..111790)	Acanthamoeba castellanii str. Neff	14919619
ACA1_151360	CDS	ACA1_151360	NW_004457511.1	112557	114141	D	encoded by transcript ACA1_151360A; uncharacterized protein	join(112557..112718,112816..113431,113507..113645,113760..114141)	Acanthamoeba castellanii str. Neff	14919620
ACA1_151370	CDS	ACA1_151370	NW_004457511.1	114295	117460	R	encoded by transcript ACA1_151370A; diacylglycerol O-acyltransferase, putative	complement(join(114295..114342,114475..114543,114605..114655,114760..114984,115091..115195,115333..115458,115610..115713,115796..115895,116014..116087,116213..116330,116464..116540,116652..116769,116882..117017,117049..117237,117390..117460))	Acanthamoeba castellanii str. Neff	14919621
ACA1_151380	CDS	ACA1_151380	NW_004457511.1	118281	118567	R	encoded by transcript ACA1_151380A; uncharacterized protein	complement(join(118281..118354,118414..118567))	Acanthamoeba castellanii str. Neff	14919622
ACA1_151390	CDS	ACA1_151390	NW_004457511.1	119598	119845	R	encoded by transcript ACA1_151390A; uncharacterized protein	complement(join(119598..119656,119704..119845))	Acanthamoeba castellanii str. Neff	14919623
ACA1_151400	CDS	ACA1_151400	NW_004457511.1	120077	120493	R	encoded by transcript ACA1_151400A; uncharacterized protein	complement(join(120077..120303,120358..120493))	Acanthamoeba castellanii str. Neff	14919624
ACA1_166220	CDS	ACA1_166220	NW_004457509.1	50	544	D	encoded by transcript ACA1_166220A; rRNA-processing protein EBP2, putative	join(50..270,388..544)	Acanthamoeba castellanii str. Neff	14919584
ACA1_166330	CDS	ACA1_166330	NW_004457509.1	5960	6367	R	encoded by transcript ACA1_166330A; integrase core domain containing protein	complement(5960..6367)	Acanthamoeba castellanii str. Neff	14919582
ACA1_166340	CDS	ACA1_166340	NW_004457509.1	6795	7928	R	encoded by transcript ACA1_166340A; zinc knuckle domain containing protein	complement(join(6795..7170,7381..7683,7786..7928))	Acanthamoeba castellanii str. Neff	14919583
ACA1_166450	CDS	ACA1_166450	NW_004457509.1	14919	16057	D	encoded by transcript ACA1_166450A; uncharacterized protein	join(14919..14987,15045..15158,15240..15752,15890..16057)	Acanthamoeba castellanii str. Neff	14919581
ACA1_000210	CDS	ACA1_000210	NW_004457507.1	7839	8176	D	encoded by transcript ACA1_000210A; H/ACA ribonucleoprotein complex subunit 3, putative	join(7839..7935,8079..8176)	Acanthamoeba castellanii str. Neff	14919579
ACA1_000220	CDS	ACA1_000220	NW_004457507.1	8261	8804	R	encoded by transcript ACA1_000220A; Endonuclease/Exonuclease/phosphatase family protein	complement(join(8261..8475,8576..8804))	Acanthamoeba castellanii str. Neff	14919580
ACA1_000330	CDS	ACA1_000330	NW_004457507.1	14739	19223	R	encoded by transcript ACA1_000330A; Myotubularin, putative	complement(join(14739..14852,14935..16239,16318..16456,16546..16715,16824..16942,17023..17178,17276..17407,17497..17639,17729..17917,18001..18400,18779..18941,19047..>19223))	Acanthamoeba castellanii str. Neff	14919578
ACA1_317980	CDS	ACA1_317980	NW_004457505.1	13402	14210	D	encoded by transcript ACA1_317980A; polynucleotide adenyltransferase	join(13402..13602,13661..13777,13856..13936,14071..14169,14193..14210)	Acanthamoeba castellanii str. Neff	14919577
ACA1_317990	CDS	ACA1_317990	NW_004457505.1	14241	14880	D	encoded by transcript ACA1_317990A; RNA recognition motif domain containing protein	join(14241..14311,14374..14481,14583..14880)	Acanthamoeba castellanii str. Neff	14919576
ACA1_040420	CDS	ACA1_040420	NW_004457503.1	32	359	R	encoded by transcript ACA1_040420A; bifunctional aspartate kinase/diaminopimelate decarboxylase protein	complement(join(<32..96,155..359))	Acanthamoeba castellanii str. Neff	14919564
ACA1_040430	CDS	ACA1_040430	NW_004457503.1	443	937	D	encoded by transcript ACA1_040430A; uncharacterized protein	443..937	Acanthamoeba castellanii str. Neff	14919569
ACA1_040440	CDS	ACA1_040440	NW_004457503.1	1622	5129	R	encoded by transcript ACA1_040440A; uncharacterized protein	complement(join(1622..1875,1948..2015,2090..2249,2319..2398,2503..2649,2726..2802,2888..2989,3132..3447,3542..3725,3825..3942,4046..4110,4124..4146,4391..4491,4605..4772,4854..5129))	Acanthamoeba castellanii str. Neff	14919570
ACA1_040450	CDS	ACA1_040450	NW_004457503.1	5544	7251	D	encoded by transcript ACA1_040450A; carrier superfamily protein	join(5544..5670,5751..5839,6046..6140,6225..6298,6382..6480,6554..6656,6748..6799,6862..6990,7081..7251)	Acanthamoeba castellanii str. Neff	14919565
ACA1_040460	CDS	ACA1_040460	NW_004457503.1	7408	8843	R	encoded by transcript ACA1_040460A; Protein disulfideisomerase, putative	complement(join(7408..7573,7675..7984,8074..8390,8494..8603,8670..8843))	Acanthamoeba castellanii str. Neff	14919566
ACA1_040470	CDS	ACA1_040470	NW_004457503.1	9061	12333	D	encoded by transcript ACA1_040470A; leukotriene A4 hydrolase/aminopeptidase	join(9061..9158,9248..9320,9432..9577,9672..9769,9836..9898,9967..10028,10102..10219,10300..10378,10460..10481,10581..10666,10729..10773,10852..10895,10971..11088,11156..11180,11264..11374,11471..11596,11683..11824,11911..12210,12293..12333)	Acanthamoeba castellanii str. Neff	14919567
ACA1_040480	CDS	ACA1_040480	NW_004457503.1	12983	16666	D	encoded by transcript ACA1_040480A; chloride transporter, putative	join(12983..13207,13277..13424,13499..13551,13619..13709,13779..13921,14056..14182,14277..14374,14439..14484,14607..14644,14724..14813,14895..14994,15074..15203,15292..15326,15423..15523,15606..15665,15751..16045,16128..16223,16308..16459,16514..16666)	Acanthamoeba castellanii str. Neff	14919568
ACA1_040500	CDS	ACA1_040500	NW_004457503.1	20629	23506	R	encoded by transcript ACA1_040500A; Autophagy related 16 like 2, putative	complement(join(20629..20716,20799..20932,21034..21147,21255..21440,21552..21617,21746..22012,22089..22195,22277..22445,22530..22629,22752..22897,23093..23154,23260..23506))	Acanthamoeba castellanii str. Neff	14919572
ACA1_040510	CDS	ACA1_040510	NW_004457503.1	23728	25423	R	encoded by transcript ACA1_040510A; ubiquitin domain containing protein	complement(join(23728..24012,24109..24267,24349..24472,24570..24702,24779..24895,24997..25423))	Acanthamoeba castellanii str. Neff	14919573
ACA1_040520	CDS	ACA1_040520	NW_004457503.1	25550	27385	D	encoded by transcript ACA1_040520A; golgi family protein, putative	join(25550..25643,25721..25879,25955..26068,26145..26224,26345..26437,26528..26611,26718..26898,26981..27133,27192..27385)	Acanthamoeba castellanii str. Neff	14919574
ACA1_040530	CDS	ACA1_040530	NW_004457503.1	27456	29760	R	encoded by transcript ACA1_040530A; glycerol-3-phosphate dehydrogenase family protein	complement(join(27456..27500,27725..27812,27861..28009,28094..28145,28229..28287,28358..28436,28518..28609,28748..28809,28884..29022,29166..29340,29438..29587,29723..29760))	Acanthamoeba castellanii str. Neff	14919575
ACA1_040640	CDS	ACA1_040640	NW_004457503.1	33087	34831	D	encoded by transcript ACA1_040640A; transporter, major facilitator subfamily protein	join(33087..33164,33263..33380,33458..33535,33632..33701,33770..34121,34203..34263,34340..34519,34616..34788,34826..34831)	Acanthamoeba castellanii str. Neff	14919533
ACA1_040650	CDS	ACA1_040650	NW_004457503.1	36401	37697	D	encoded by transcript ACA1_040650A; uncharacterized protein	join(36401..36617,36820..36918,37199..37434,37521..37697)	Acanthamoeba castellanii str. Neff	14919534
ACA1_040660	CDS	ACA1_040660	NW_004457503.1	38008	39110	D	encoded by transcript ACA1_040660A; FAM96B, putative	join(38008..38185,38265..38389,38449..38808,38903..38948,39013..39110)	Acanthamoeba castellanii str. Neff	14919535
ACA1_040670	CDS	ACA1_040670	NW_004457503.1	39604	41974	D	encoded by transcript ACA1_040670A; anion transporter, putative	join(39604..39805,39866..40117,40205..40394,40482..40663,40763..40931,41031..41111,41184..41490,41587..41646,41708..41974)	Acanthamoeba castellanii str. Neff	14919536
ACA1_040680	CDS	ACA1_040680	NW_004457503.1	42678	47102	D	encoded by transcript ACA1_040680A; ATPase/histidine kinase/DNA gyrase B/HSP90 domain containing protein	join(42678..42898,43158..43216,43343..43455,43538..43636,43713..44293,44365..44654,44725..44881,44971..45142,45223..45335,45429..45579,45668..45774,45847..46273,46325..46585,46739..46897,47010..47102)	Acanthamoeba castellanii str. Neff	14919537
ACA1_040690	CDS	ACA1_040690	NW_004457503.1	48012	52235	D	encoded by transcript ACA1_040690A; multisensor hybrid histidine kinase	join(48012..48081,48161..48327,48493..48582,48698..48865,49028..49437,49532..49590,49815..50024,50118..50337,50422..50593,50698..50807,50891..50996,51147..52235)	Acanthamoeba castellanii str. Neff	14919538
ACA1_040700	CDS	ACA1_040700	NW_004457503.1	52381	55010	R	encoded by transcript ACA1_040700A; GLE1 family protein	complement(join(52381..52688,52786..52901,52994..53080,53150..53313,53395..53592,53682..53940,54029..54157,54228..54278,54420..54517,54651..54748,54788..55010))	Acanthamoeba castellanii str. Neff	14919539
ACA1_040710	CDS	ACA1_040710	NW_004457503.1	55468	58645	D	encoded by transcript ACA1_040710A; ATP-dependent metallopeptidase HflB subfamily protein	join(55468..55935,56051..56241,56331..56475,56562..56753,56855..57068,57174..57248,57316..57461,57546..57866,57927..58022,58099..58245,58335..58409,58517..58645)	Acanthamoeba castellanii str. Neff	14919540
ACA1_040720	CDS	ACA1_040720	NW_004457503.1	59000	64266	D	encoded by transcript ACA1_040720A; adaptin subfamily protein	join(59000..59161,59226..59387,59449..59468,59563..59753,59841..59980,60081..60403,60485..60711,60802..60979,61085..61279,61362..61455,61544..61979,62075..62136,62207..63069,63187..63472,63559..63777,63862..64266)	Acanthamoeba castellanii str. Neff	14919541
ACA1_040730	CDS	ACA1_040730	NW_004457503.1	64451	71096	R	encoded by transcript ACA1_040730A; serine/threonine kinase	complement(join(64451..65095,65260..65628,65739..65998,66083..66277,66357..66645,66740..66883,66960..67081,67161..67463,67576..68170,68334..68404,68486..68938,69044..69183,69287..69849,69883..69901,70041..70191,70277..70397,70534..70675,70786..70880,70998..71096))	Acanthamoeba castellanii str. Neff	14919542
ACA1_040740	CDS	ACA1_040740	NW_004457503.1	71577	72999	D	encoded by transcript ACA1_040740A; tRNA (guanine-N1-)-methyltransferase	join(71577..71936,72033..72076,72228..72323,72413..72572,72660..72762,72779..72999)	Acanthamoeba castellanii str. Neff	14919543
ACA1_040750	CDS	ACA1_040750	NW_004457503.1	73368	75515	D	encoded by transcript ACA1_040750A; transporter, permease	join(73368..73736,73841..73979,74081..74349,74454..74681,74778..74903,74999..75091,75213..75515)	Acanthamoeba castellanii str. Neff	14919544
ACA1_040760	CDS	ACA1_040760	NW_004457503.1	75657	76643	R	encoded by transcript ACA1_040760A; SNF7 family protein	complement(join(75657..75776,75847..75930,76054..76175,76269..76448,76535..76643))	Acanthamoeba castellanii str. Neff	14919545
ACA1_040770	CDS	ACA1_040770	NW_004457503.1	76934	80739	R	encoded by transcript ACA1_040770A; helicase Cterminal domain containing protein	complement(join(76934..77356,77445..78047,78531..78760,78844..79005,79107..80739))	Acanthamoeba castellanii str. Neff	14919546
ACA1_040780	CDS	ACA1_040780	NW_004457503.1	81109	81575	R	encoded by transcript ACA1_040780A; uncharacterized protein	complement(join(81109..81467,81527..81575))	Acanthamoeba castellanii str. Neff	14919547
ACA1_040790	CDS	ACA1_040790	NW_004457503.1	81981	84554	R	encoded by transcript ACA1_040790A; elongation factor 2, putative	complement(81981..84554)	Acanthamoeba castellanii str. Neff	14919548
ACA1_040800	CDS	ACA1_040800	NW_004457503.1	84793	87465	D	encoded by transcript ACA1_040800A; oxidoreductase, short chain dehydrogenase/reductase, putative	join(84793..85094,85220..85545,85714..85797,85867..86095,86172..86287,86384..86473,86543..86603,86699..86793,86886..86936,87013..87135,87215..87328,87392..87465)	Acanthamoeba castellanii str. Neff	14919549
ACA1_040810	CDS	ACA1_040810	NW_004457503.1	87612	87936	D	encoded by transcript ACA1_040810A; uncharacterized protein	join(87612..87710,87793..87936)	Acanthamoeba castellanii str. Neff	14919550
ACA1_040820	CDS	ACA1_040820	NW_004457503.1	88051	88978	R	encoded by transcript ACA1_040820A; uncharacterized protein	complement(join(88051..88629,88691..88978))	Acanthamoeba castellanii str. Neff	14919551
ACA1_040830	CDS	ACA1_040830	NW_004457503.1	89139	90003	R	encoded by transcript ACA1_040830A; ubiquitinconjugating enzyme protein E2, putative	complement(join(89139..89216,89312..89446,89519..89562,89621..89718,89790..89889,89955..90003))	Acanthamoeba castellanii str. Neff	14919552
ACA1_040840	CDS	ACA1_040840	NW_004457503.1	90159	93954	R	encoded by transcript ACA1_040840A; programmed cell death 6 interacting protein, putative	complement(join(90159..90181,90299..90470,90542..90602,90670..90858,90909..91030,91098..91238,91321..91473,91535..91682,91754..91851,91944..92100,92166..92233,92312..92518,92610..92717,92814..92915,92977..93288,93372..93523,93595..93643,93709..93954))	Acanthamoeba castellanii str. Neff	14919553
ACA1_040850	CDS	ACA1_040850	NW_004457503.1	94135	94741	D	encoded by transcript ACA1_040850A; NADH dehydrogenase, putative	join(94135..94245,94319..94741)	Acanthamoeba castellanii str. Neff	14919554
ACA1_040860	CDS	ACA1_040860	NW_004457503.1	94971	96469	R	encoded by transcript ACA1_040860A; DNA replication factor C complex subunit 2, putative	complement(join(94971..95096,95194..95388,95461..95592,95665..95860,95937..96038,96115..96221,96287..96469))	Acanthamoeba castellanii str. Neff	14919555
ACA1_040870	CDS	ACA1_040870	NW_004457503.1	96605	98140	R	encoded by transcript ACA1_040870A; ATPase, AAA domain containing protein	complement(96605..98140)	Acanthamoeba castellanii str. Neff	14919556
ACA1_040880	CDS	ACA1_040880	NW_004457503.1	98360	104015	R	encoded by transcript ACA1_040880A; uncharacterized protein	complement(join(98360..98434,98537..98584,98668..98793,98874..98937,98960..99099,99191..99252,99445..99555,99628..100810,100891..101015,101098..101210,101266..101411,101504..101564,101630..102781,102859..102929,103002..103057,103125..103241,103319..103856,103959..104015))	Acanthamoeba castellanii str. Neff	14919557
ACA1_040890	CDS	ACA1_040890	NW_004457503.1	104168	105029	R	encoded by transcript ACA1_040890A; Rabtype small GTP-binding protein	complement(join(104168..104372,104432..104557,104693..104726,104816..105029))	Acanthamoeba castellanii str. Neff	14919558
ACA1_041000	CDS	ACA1_041000	NW_004457503.1	105216	105386	D	encoded by transcript ACA1_041000A; uncharacterized protein	105216..>105386	Acanthamoeba castellanii str. Neff	14919559
ACA1_041110	CDS	ACA1_041110	NW_004457503.1	105950	106477	D	encoded by transcript ACA1_041110A; uncharacterized protein	join(105950..106373,106449..>106477)	Acanthamoeba castellanii str. Neff	14919560
ACA1_041220	CDS	ACA1_041220	NW_004457503.1	107873	108336	D	encoded by transcript ACA1_041220A; RecF/RecN/SMC domain containing protein	join(107873..108040,108123..108272,108295..108336)	Acanthamoeba castellanii str. Neff	14919561
ACA1_041430	CDS	ACA1_041430	NW_004457503.1	113347	115892	D	encoded by transcript ACA1_041430A; uncharacterized protein	join(<113347..113659,113746..113878,113959..114130,115029..115475,115507..115606,115682..115792,115873..115892)	Acanthamoeba castellanii str. Neff	14919562
ACA1_041640	CDS	ACA1_041640	NW_004457503.1	116625	117374	D	encoded by transcript ACA1_041640A; uncharacterized protein	116625..>117374	Acanthamoeba castellanii str. Neff	14919563
ACA1_015470	CDS	ACA1_015470	NW_004457501.1	28	1179	R	encoded by transcript ACA1_015470A; uncharacterized protein	complement(join(<28..833,891..1179))	Acanthamoeba castellanii str. Neff	14919524
ACA1_015480	CDS	ACA1_015480	NW_004457501.1	1528	2818	D	encoded by transcript ACA1_015480A; uncharacterized protein	join(1528..1738,1821..1937,2031..2123,2231..2347,2432..2551,2631..2818)	Acanthamoeba castellanii str. Neff	14919521
ACA1_015490	CDS	ACA1_015490	NW_004457501.1	2914	4487	D	encoded by transcript ACA1_015490A; uncharacterized protein	join(2914..3028,3129..3254,3332..3464,3536..3648,3747..3872,3949..4080,4160..4282,4354..4487)	Acanthamoeba castellanii str. Neff	14919522
ACA1_015500	CDS	ACA1_015500	NW_004457501.1	5301	7977	D	encoded by transcript ACA1_015500A; aldehyde dehydrogenase	join(5301..5408,5481..5564,5657..5749,5838..5962,6050..6124,6198..6268,6352..6416,6531..6616,6694..6852,6958..7056,7121..7193,7252..7309,7386..7446,7545..7627,7682..7800,7870..7977)	Acanthamoeba castellanii str. Neff	14919523
ACA1_015510	CDS	ACA1_015510	NW_004457501.1	8072	11473	R	encoded by transcript ACA1_015510A; replication factora protein 1 (rpa1) subfamily protein	complement(join(8072..8162,8254..8363,8444..8567,8723..8790,8861..8968,9052..9162,9334..9401,9453..9522,9599..9669,9816..10011,10100..10214,10306..10370,10489..10909,10990..11078,11167..11218,11292..11473))	Acanthamoeba castellanii str. Neff	14919520
ACA1_015520	CDS	ACA1_015520	NW_004457501.1	11573	12667	R	encoded by transcript ACA1_015520A; uncharacterized protein	complement(11573..12667)	Acanthamoeba castellanii str. Neff	14919525
ACA1_015530	CDS	ACA1_015530	NW_004457501.1	13083	13931	D	encoded by transcript ACA1_015530A; uncharacterized protein	13083..13931	Acanthamoeba castellanii str. Neff	14919526
ACA1_015540	CDS	ACA1_015540	NW_004457501.1	14584	15945	D	encoded by transcript ACA1_015540A; reverse transcriptase	join(<14584..14743,14790..15763,15859..15945)	Acanthamoeba castellanii str. Neff	14919527
ACA1_015550	CDS	ACA1_015550	NW_004457501.1	16796	19633	R	encoded by transcript ACA1_015550A; uncharacterized protein	complement(join(16796..17789,17875..17979,18067..18181,18259..18406,18478..18523,18628..18845,18971..19063,19133..19633))	Acanthamoeba castellanii str. Neff	14919528
ACA1_015560	CDS	ACA1_015560	NW_004457501.1	20130	21254	D	encoded by transcript ACA1_015560A; uncharacterized protein	join(20130..20286,20377..20456,20519..20616,20699..20788,20876..20968,21050..21136,21206..21254)	Acanthamoeba castellanii str. Neff	14919529
ACA1_015580	CDS	ACA1_015580	NW_004457501.1	24516	25093	D	encoded by transcript ACA1_015580A; kelch motif family protein	join(24516..24578,24656..24737,24811..24898,24961..25093)	Acanthamoeba castellanii str. Neff	14919531
ACA1_015590	CDS	ACA1_015590	NW_004457501.1	25250	26450	D	encoded by transcript ACA1_015590A; uncharacterized protein	join(25250..25282,25361..25445,25546..25650,25771..25951,26015..26151,26218..26450)	Acanthamoeba castellanii str. Neff	14919532
ACA1_392690	CDS	ACA1_392690	NW_004457498.1	73	769	D	encoded by transcript ACA1_392690A; uncharacterized protein	join(<73..135,208..414,533..769)	Acanthamoeba castellanii str. Neff	14919433
ACA1_392810	CDS	ACA1_392810	NW_004457498.1	7720	8028	R	encoded by transcript ACA1_392810A; uncharacterized protein	complement(<7720..8028)	Acanthamoeba castellanii str. Neff	14919480
ACA1_392920	CDS	ACA1_392920	NW_004457498.1	8675	8947	D	encoded by transcript ACA1_392920A; uncharacterized protein	8675..8947	Acanthamoeba castellanii str. Neff	14919481
ACA1_392930	CDS	ACA1_392930	NW_004457498.1	9018	9924	D	encoded by transcript ACA1_392930A; uncharacterized protein	join(9018..9497,9620..9741,9816..9924)	Acanthamoeba castellanii str. Neff	14919482
ACA1_392940	CDS	ACA1_392940	NW_004457498.1	9911	11145	R	encoded by transcript ACA1_392940A; uncharacterized protein	complement(join(9911..10138,10217..10308,10387..10488,10567..10645,10722..10792,10869..10912,10994..11145))	Acanthamoeba castellanii str. Neff	14919483
ACA1_392950	CDS	ACA1_392950	NW_004457498.1	12118	14769	D	encoded by transcript ACA1_392950A; cupin superfamily subfamily protein	join(12118..12340,12423..12496,12594..12696,12778..12980,13077..13181,13277..13315,13373..13408,13488..13561,13649..13763,13835..13917,13995..14068,14156..14226,14321..14542,14656..14769)	Acanthamoeba castellanii str. Neff	14919484
ACA1_392960	CDS	ACA1_392960	NW_004457498.1	14898	15831	R	encoded by transcript ACA1_392960A; universal stress domain containing protein	complement(join(14898..14970,15041..15093,15166..15243,15320..15423,15516..15622,15713..15831))	Acanthamoeba castellanii str. Neff	14919434
ACA1_392970	CDS	ACA1_392970	NW_004457498.1	16025	18002	D	encoded by transcript ACA1_392970A; hydrolase, alpha/beta fold domain containing protein	join(16025..16432,16542..16629,16719..16834,16926..18002)	Acanthamoeba castellanii str. Neff	14919435
ACA1_392980	CDS	ACA1_392980	NW_004457498.1	18154	19835	D	encoded by transcript ACA1_392980A; uncharacterized protein	join(18154..18357,18456..18659,18761..18842,18938..18999,19062..19308,19405..19533,19617..19735,19806..19835)	Acanthamoeba castellanii str. Neff	14919436
ACA1_392990	CDS	ACA1_392990	NW_004457498.1	21236	23788	D	encoded by transcript ACA1_392990A; ankyrin 2,3/unc44, putative	join(21236..21382,21467..21590,21791..21851,21912..22042,22149..22244,22319..22397,22491..22533,22635..22690,22762..22819,22888..22960,23036..23113,23199..23249,23320..23370,23439..23586,23677..23788)	Acanthamoeba castellanii str. Neff	14919437
ACA1_393000	CDS	ACA1_393000	NW_004457498.1	23866	25254	R	encoded by transcript ACA1_393000A; domain found in if2b/if5 domain containing protein	complement(23866..25254)	Acanthamoeba castellanii str. Neff	14919438
ACA1_393010	CDS	ACA1_393010	NW_004457498.1	25804	27774	D	encoded by transcript ACA1_393010A; histidine-tRNA ligase	join(25804..25917,25976..26030,26100..26211,26295..26409,26487..26612,26710..26923,27010..27320,27400..27774)	Acanthamoeba castellanii str. Neff	14919439
ACA1_393020	CDS	ACA1_393020	NW_004457498.1	28117	28469	D	encoded by transcript ACA1_393020A; uncharacterized protein	join(28117..28228,28303..28469)	Acanthamoeba castellanii str. Neff	14919440
ACA1_393030	CDS	ACA1_393030	NW_004457498.1	29263	29715	D	encoded by transcript ACA1_393030A; uncharacterized protein	join(29263..29500,29582..29715)	Acanthamoeba castellanii str. Neff	14919441
ACA1_393040	CDS	ACA1_393040	NW_004457498.1	30426	30808	D	encoded by transcript ACA1_393040A; uncharacterized protein	join(30426..30567,30633..30808)	Acanthamoeba castellanii str. Neff	14919442
ACA1_393050	CDS	ACA1_393050	NW_004457498.1	30957	34492	R	encoded by transcript ACA1_393050A; RhoGEF domain containing protein	complement(join(30957..31216,31311..31394,31470..31623,31717..31878,31966..32061,32143..32250,32358..32520,32615..32961,33102..33186,33288..33723,34036..34492))	Acanthamoeba castellanii str. Neff	14919443
ACA1_393060	CDS	ACA1_393060	NW_004457498.1	34766	38538	R	encoded by transcript ACA1_393060A; uncharacterized protein	complement(join(34766..34909,34920..35361,35394..36054,36129..36616,36693..36789,36861..36940,37030..37103,37164..37306,37376..37509,37592..38538))	Acanthamoeba castellanii str. Neff	14919444
ACA1_393070	CDS	ACA1_393070	NW_004457498.1	39344	46104	D	encoded by transcript ACA1_393070A; Vault protein interalpha-trypsin	join(<39344..39495,39566..39639,39708..39791,39887..39939,40009..40059,40139..40238,40337..40505,40595..40751,40826..40961,43589..43717,43782..43904,44109..44191,44343..44450,44523..44586,44658..44746,44822..44935,44997..45170,45256..46104)	Acanthamoeba castellanii str. Neff	14919445
ACA1_393280	CDS	ACA1_393280	NW_004457498.1	49788	52935	D	encoded by transcript ACA1_393280A; uncharacterized protein	join(49788..49876,49940..50066,50094..50211,50278..50388,50467..50523,50597..50686,50773..50906,50977..51114,51193..51330,51396..51513,51570..51635,51704..51837,51916..52043,52128..52203,52288..52935)	Acanthamoeba castellanii str. Neff	14919446
ACA1_393390	CDS	ACA1_393390	NW_004457498.1	54371	56516	D	encoded by transcript ACA1_393390A; exostosin, putative	join(54371..54443,54557..54659,54834..54963,55085..55238,55383..55702,55799..55937,56054..56259,56370..56516)	Acanthamoeba castellanii str. Neff	14919447
ACA1_393400	CDS	ACA1_393400	NW_004457498.1	56693	57728	R	encoded by transcript ACA1_393400A; uncharacterized protein	complement(join(56693..56737,56838..57129,57577..57728))	Acanthamoeba castellanii str. Neff	14919448
ACA1_393510	CDS	ACA1_393510	NW_004457498.1	57968	58761	D	encoded by transcript ACA1_393510A; uncharacterized protein	join(57968..58519,58678..58761)	Acanthamoeba castellanii str. Neff	14919449
ACA1_393520	CDS	ACA1_393520	NW_004457498.1	59294	62321	R	encoded by transcript ACA1_393520A; Carbohydrate-binding family 6 protein	complement(join(59294..59656,59736..60172,60278..60488,60596..60685,60808..61528,61666..61847,61940..62110,62247..62321))	Acanthamoeba castellanii str. Neff	14919450
ACA1_393530	CDS	ACA1_393530	NW_004457498.1	63031	65991	D	encoded by transcript ACA1_393530A; uncharacterized protein	join(63031..63579,63694..63773,63898..63992,64085..64212,64358..64446,64577..64692,64795..64922,65075..65345,65401..65775,65861..65991)	Acanthamoeba castellanii str. Neff	14919451
ACA1_393540	CDS	ACA1_393540	NW_004457498.1	66097	66791	D	encoded by transcript ACA1_393540A; uncharacterized protein	join(66097..66466,66535..66791)	Acanthamoeba castellanii str. Neff	14919452
ACA1_393550	CDS	ACA1_393550	NW_004457498.1	67434	68370	R	encoded by transcript ACA1_393550A; uncharacterized protein	complement(join(67434..67716,67850..67912,68011..68089,68289..68370))	Acanthamoeba castellanii str. Neff	14919453
ACA1_393560	CDS	ACA1_393560	NW_004457498.1	68671	69764	D	encoded by transcript ACA1_393560A; hydrolase, NUDIX domain containing protein	join(68671..68675,68801..68853,68921..69058,69140..69303,69408..69764)	Acanthamoeba castellanii str. Neff	14919454
ACA1_393570	CDS	ACA1_393570	NW_004457498.1	69965	73704	R	encoded by transcript ACA1_393570A; SH3 domain containing protein	complement(join(69965..70015,70104..70216,70294..70677,70813..70927,71004..72233,72328..73704))	Acanthamoeba castellanii str. Neff	14919455
ACA1_393580	CDS	ACA1_393580	NW_004457498.1	73707	74806	R	encoded by transcript ACA1_393580A; uncharacterized protein	complement(join(73707..73731,73863..73986,74271..74524,74748..74806))	Acanthamoeba castellanii str. Neff	14919456
ACA1_393590	CDS	ACA1_393590	NW_004457498.1	75308	77257	R	encoded by transcript ACA1_393590A; succinate dehydrogenase and fumarate reductase ironsulfur subfamily protein	complement(join(75308..75466,75558..75624,75708..75781,75858..75960,76206..76520,76609..76790,76892..77062,77183..77257))	Acanthamoeba castellanii str. Neff	14919457
ACA1_393700	CDS	ACA1_393700	NW_004457498.1	78454	81690	D	encoded by transcript ACA1_393700A; ABC transporter transmembrane region domain containing protein	join(78454..78879,78951..79059,79135..79208,79273..79381,79486..79619,79704..79827,79911..80021,80099..80209,80284..80376,80477..80677,80791..80905,81101..81194,81299..81451,81532..81690)	Acanthamoeba castellanii str. Neff	14919458
ACA1_393910	CDS	ACA1_393910	NW_004457498.1	82755	83895	D	encoded by transcript ACA1_393910A; pentatricopeptide repeat domain containing protein	join(82755..82824,82928..83895)	Acanthamoeba castellanii str. Neff	14919459
ACA1_393920	CDS	ACA1_393920	NW_004457498.1	84011	86718	R	encoded by transcript ACA1_393920A; Tubulin/FtsZ family, GTPase domain containing protein	complement(join(84011..84250,84417..84917,85112..85180,85642..85870,86065..86081,86333..86418,86475..86718))	Acanthamoeba castellanii str. Neff	14919460
ACA1_394030	CDS	ACA1_394030	NW_004457498.1	87165	87923	R	encoded by transcript ACA1_394030A; uncharacterized protein	complement(join(87165..87388,87485..87600,87697..87923))	Acanthamoeba castellanii str. Neff	14919461
ACA1_394140	CDS	ACA1_394140	NW_004457498.1	90001	90761	R	encoded by transcript ACA1_394140A; ubiquitin interaction motif domain containing protein	complement(join(90001..90137,90230..90505,90605..>90761))	Acanthamoeba castellanii str. Neff	14919462
ACA1_394150	CDS	ACA1_394150	NW_004457498.1	91064	94255	R	encoded by transcript ACA1_394150A; uncharacterized protein	complement(join(91064..91167,91236..91417,91522..91795,91877..92041,92106..92182,92259..92335,92443..92806,92936..93047,93123..93175,93254..93346,93426..93478,93551..93730,93893..94018,94118..94255))	Acanthamoeba castellanii str. Neff	14919463
ACA1_394260	CDS	ACA1_394260	NW_004457498.1	96027	96514	R	encoded by transcript ACA1_394260A; uncharacterized protein	complement(join(96027..96146,96250..96350,96445..96514))	Acanthamoeba castellanii str. Neff	14919464
ACA1_394270	CDS	ACA1_394270	NW_004457498.1	96900	98795	D	encoded by transcript ACA1_394270A; Fbox domain containing protein	join(96900..96957,97017..97076,97332..97434,97502..97701,97774..97887,97961..98051,98126..98224,98280..98566,98644..98795)	Acanthamoeba castellanii str. Neff	14919465
ACA1_394280	CDS	ACA1_394280	NW_004457498.1	99188	100047	D	encoded by transcript ACA1_394280A; uncharacterized protein	join(99188..99531,99617..99732,99824..100047)	Acanthamoeba castellanii str. Neff	14919466
ACA1_394290	CDS	ACA1_394290	NW_004457498.1	100194	101063	R	encoded by transcript ACA1_394290A; uncharacterized protein	complement(join(100194..100324,100430..101063))	Acanthamoeba castellanii str. Neff	14919467
ACA1_394400	CDS	ACA1_394400	NW_004457498.1	101630	103261	R	encoded by transcript ACA1_394400A; uncharacterized protein	complement(join(101630..101889,102025..102559,102631..102805,102932..103101,103175..103261))	Acanthamoeba castellanii str. Neff	14919468
ACA1_394410	CDS	ACA1_394410	NW_004457498.1	103837	103983	D	encoded by transcript ACA1_394410A; uncharacterized protein	103837..103983	Acanthamoeba castellanii str. Neff	14919469
ACA1_394520	CDS	ACA1_394520	NW_004457498.1	107080	108295	D	encoded by transcript ACA1_394520A; uncharacterized protein	join(107080..107287,107352..107434,107465..107590,107746..107877,108050..108295)	Acanthamoeba castellanii str. Neff	14919470
ACA1_394530	CDS	ACA1_394530	NW_004457498.1	108518	108870	D	encoded by transcript ACA1_394530A; uncharacterized protein	join(108518..108571,108628..108870)	Acanthamoeba castellanii str. Neff	14919471
ACA1_394540	CDS	ACA1_394540	NW_004457498.1	108878	109375	D	encoded by transcript ACA1_394540A; uncharacterized protein	join(108878..108925,108977..109375)	Acanthamoeba castellanii str. Neff	14919472
ACA1_394560	CDS	ACA1_394560	NW_004457498.1	110229	110814	D	encoded by transcript ACA1_394560A; uncharacterized protein	join(110229..110289,110354..110814)	Acanthamoeba castellanii str. Neff	14919474
ACA1_394570	CDS	ACA1_394570	NW_004457498.1	110892	111491	R	encoded by transcript ACA1_394570A; uncharacterized protein	complement(join(110892..111035,111112..111237,111306..111491))	Acanthamoeba castellanii str. Neff	14919475
ACA1_394580	CDS	ACA1_394580	NW_004457498.1	112774	113612	D	encoded by transcript ACA1_394580A; 3'5' exonuclease domain containing protein	join(112774..112929,113009..113161,113208..113612)	Acanthamoeba castellanii str. Neff	14919476
ACA1_394590	CDS	ACA1_394590	NW_004457498.1	114666	115545	D	encoded by transcript ACA1_394590A; uncharacterized protein	join(114666..114912,114983..115545)	Acanthamoeba castellanii str. Neff	14919477
ACA1_394600	CDS	ACA1_394600	NW_004457498.1	115590	121597	R	encoded by transcript ACA1_394600A; GRIP domain containing protein	complement(join(115590..115604,115710..115854,115986..116140,116231..116549,116642..116809,116892..117156,117237..117327,117411..117975,118148..118224,118322..118393,118521..119657,119831..119925,120040..120124,120234..120373,120470..121075,121177..121279,121370..121597))	Acanthamoeba castellanii str. Neff	14919478
ACA1_394610	CDS	ACA1_394610	NW_004457498.1	121781	123502	D	encoded by transcript ACA1_394610A; kinase, pfkB superfamily protein	join(121781..121869,121946..122005,122084..122168,122246..122319,122399..122512,122592..122661,122718..122819,122913..123149,123242..123502)	Acanthamoeba castellanii str. Neff	14919485
ACA1_394620	CDS	ACA1_394620	NW_004457498.1	123564	129268	R	encoded by transcript ACA1_394620A; RasGEF domain containing protein	complement(join(123564..123699,124027..124255,124360..125172,125292..125370,125443..125521,125605..125665,125734..125860,125925..126012,126103..126178,126267..126421,126518..126570,126638..126712,126786..126853,126913..127382,127456..127808,127889..127964,128025..128080,128156..128361,128421..128544,128611..128702,128772..128862,128937..129065,129263..129268))	Acanthamoeba castellanii str. Neff	14919486
ACA1_394730	CDS	ACA1_394730	NW_004457498.1	130500	131344	R	encoded by transcript ACA1_394730A; putative tyrosineprotein phosphatase oca1, putative	complement(join(130500..130583,130691..130776,130858..130945,131037..131130,131193..131344))	Acanthamoeba castellanii str. Neff	14919487
ACA1_394740	CDS	ACA1_394740	NW_004457498.1	131403	132624	R	encoded by transcript ACA1_394740A; uncharacterized protein	complement(join(131403..131670,131738..131860,132097..132164,132231..132306,132506..132624))	Acanthamoeba castellanii str. Neff	14919488
ACA1_394750	CDS	ACA1_394750	NW_004457498.1	132730	137990	R	encoded by transcript ACA1_394750A; PH domain containing protein	complement(join(132730..132867,135514..135585,135685..135738,135805..135939,136061..136183,136280..136517,136640..136759,136833..136927,137044..137128,137236..137507,137605..137690,137790..137841,137931..137990))	Acanthamoeba castellanii str. Neff	14919489
ACA1_394860	CDS	ACA1_394860	NW_004457498.1	138676	141563	D	encoded by transcript ACA1_394860A; PA domain containing protein	join(138676..138745,138832..138890,138968..139129,139201..139317,139396..139507,139608..139775,139913..140017,140091..140162,140302..140342,140475..140559,140645..140832,140946..141041,141129..141344,141420..141563)	Acanthamoeba castellanii str. Neff	14919490
ACA1_394970	CDS	ACA1_394970	NW_004457498.1	145235	147105	D	encoded by transcript ACA1_394970A; uncharacterized protein	join(145235..145287,145518..145628,145716..145812,145959..146882,147064..147105)	Acanthamoeba castellanii str. Neff	14919491
ACA1_395180	CDS	ACA1_395180	NW_004457498.1	148370	150057	D	encoded by transcript ACA1_395180A; protein ei24 family protein	join(148370..148585,148659..148850,148938..149071,149153..149244,149326..149402,149483..149546,149634..149710,149815..150057)	Acanthamoeba castellanii str. Neff	14919492
ACA1_395190	CDS	ACA1_395190	NW_004457498.1	151915	153686	D	encoded by transcript ACA1_395190A; uncharacterized protein	join(151915..152105,152196..152309,152333..152381,152427..152723,152937..152976,153050..153177,153247..153319,153389..153444,153600..153686)	Acanthamoeba castellanii str. Neff	14919493
ACA1_395200	CDS	ACA1_395200	NW_004457498.1	154164	154578	D	encoded by transcript ACA1_395200A; uncharacterized protein	join(154164..154230,154292..154578)	Acanthamoeba castellanii str. Neff	14919494
ACA1_395210	CDS	ACA1_395210	NW_004457498.1	154773	156907	R	encoded by transcript ACA1_395210A; nonspecific lipidtransfer protein	complement(join(154773..154928,155015..155157,155250..155360,155473..155650,155810..155873,155954..156052,156136..156206,156287..156373,156526..156582,156653..156746,156822..156907))	Acanthamoeba castellanii str. Neff	14919495
ACA1_395220	CDS	ACA1_395220	NW_004457498.1	157003	158093	D	encoded by transcript ACA1_395220A; Eukaryotic initiation factor 4E	join(157003..157296,157401..157505,157585..157662,157758..157894,157979..158093)	Acanthamoeba castellanii str. Neff	14919496
ACA1_395230	CDS	ACA1_395230	NW_004457498.1	159112	162302	D	encoded by transcript ACA1_395230A; WWE domain containing protein	join(159112..159323,159713..159945,160029..160156,160251..160473,160555..162169,162269..162302)	Acanthamoeba castellanii str. Neff	14919497
ACA1_395240	CDS	ACA1_395240	NW_004457498.1	162781	163339	R	encoded by transcript ACA1_395240A; uncharacterized protein	complement(join(162781..162891,162977..163339))	Acanthamoeba castellanii str. Neff	14919498
ACA1_395250	CDS	ACA1_395250	NW_004457498.1	163482	164241	D	encoded by transcript ACA1_395250A; uncharacterized protein	join(<163482..163562,163663..163752,163831..163984,164171..164241)	Acanthamoeba castellanii str. Neff	14919499
ACA1_395260	CDS	ACA1_395260	NW_004457498.1	164328	165582	R	encoded by transcript ACA1_395260A; uncharacterized protein	complement(join(164328..164456,164553..164765,164847..164900,165220..165582))	Acanthamoeba castellanii str. Neff	14919500
ACA1_395370	CDS	ACA1_395370	NW_004457498.1	165680	166043	D	encoded by transcript ACA1_395370A; uncharacterized protein	join(165680..165799,165900..166043)	Acanthamoeba castellanii str. Neff	14919501
ACA1_395380	CDS	ACA1_395380	NW_004457498.1	166316	167235	D	encoded by transcript ACA1_395380A; uncharacterized protein	join(166316..166405,166493..166696,166777..167235)	Acanthamoeba castellanii str. Neff	14919502
ACA1_395390	CDS	ACA1_395390	NW_004457498.1	167281	167787	R	encoded by transcript ACA1_395390A; uncharacterized protein	complement(join(167281..167514,167532..167580,167684..167787))	Acanthamoeba castellanii str. Neff	14919503
ACA1_395410	CDS	ACA1_395410	NW_004457498.1	170598	172685	R	encoded by transcript ACA1_395410A; uncharacterized protein	complement(join(170598..170766,170928..170977,171102..171215,171253..171366,171512..171665,171806..171948,172037..172095,172177..172306,172322..172373,172540..172685))	Acanthamoeba castellanii str. Neff	14919505
ACA1_395420	CDS	ACA1_395420	NW_004457498.1	173029	173452	R	encoded by transcript ACA1_395420A; uncharacterized protein	complement(join(173029..173196,173279..173452))	Acanthamoeba castellanii str. Neff	14919506
ACA1_395460	CDS	ACA1_395460	NW_004457498.1	182302	183882	D	encoded by transcript ACA1_395460A; uncharacterized protein	join(182302..182801,182912..183020,183122..183322,183391..183882)	Acanthamoeba castellanii str. Neff	14919510
ACA1_395470	CDS	ACA1_395470	NW_004457498.1	184052	186653	D	encoded by transcript ACA1_395470A; AT hook motif domain containing protein	join(184052..184200,184325..185431,185519..185630,185778..185972,186060..186653)	Acanthamoeba castellanii str. Neff	14919511
ACA1_395480	CDS	ACA1_395480	NW_004457498.1	186794	191692	R	encoded by transcript ACA1_395480A; copine subfamily protein	complement(join(186794..186892,186976..187268,187283..187625,187707..187766,187850..188011,188113..188241,188333..188370,188447..188514,188623..188708,188785..188874,188979..189065,189240..189320,189406..189470,189563..189615,189727..189808,189880..190001,190093..190239,190267..190390,190497..190599,190688..190775,190870..190928,190998..191135,191232..191302,191382..191416,191529..191692))	Acanthamoeba castellanii str. Neff	14919512
ACA1_395490	CDS	ACA1_395490	NW_004457498.1	192873	193808	D	encoded by transcript ACA1_395490A; Ankyrin repeatcontaining protein	join(192873..193152,193281..193388,193480..193808)	Acanthamoeba castellanii str. Neff	14919513
ACA1_395500	CDS	ACA1_395500	NW_004457498.1	194368	195860	R	encoded by transcript ACA1_395500A; RhoGAP domain containing protein	complement(join(194368..194703,194777..194895,194995..195064,195178..195233,195322..195399,195499..195595,195681..195748,195845..195860))	Acanthamoeba castellanii str. Neff	14919514
ACA1_395510	CDS	ACA1_395510	NW_004457498.1	196053	196672	D	encoded by transcript ACA1_395510A; Tim10/DDP family zinc finger superfamily protein	join(196053..196262,196348..196407,196559..196672)	Acanthamoeba castellanii str. Neff	14919515
ACA1_395520	CDS	ACA1_395520	NW_004457498.1	197038	198863	D	encoded by transcript ACA1_395520A; uncharacterized protein	join(197038..197120,197379..197452,197580..197622,197848..198034,198260..198347,198472..198723,198784..198863)	Acanthamoeba castellanii str. Neff	14919516
ACA1_395530	CDS	ACA1_395530	NW_004457498.1	200028	202218	R	encoded by transcript ACA1_395530A; fungal Zn(2)-Cys(6) binuclear cluster domain containing protein	complement(join(200028..200081,200111..200485,200583..200783,200866..200977,201073..201187,201236..201491,201504..201830,201906..202044,202133..202218))	Acanthamoeba castellanii str. Neff	14919517
ACA1_395540	CDS	ACA1_395540	NW_004457498.1	202518	204389	R	encoded by transcript ACA1_395540A; uncharacterized protein	complement(join(202518..202997,203087..203287,203395..203503,203614..203753,203769..204056,204069..204389))	Acanthamoeba castellanii str. Neff	14919518
ACA1_395550	CDS	ACA1_395550	NW_004457498.1	204949	207215	R	encoded by transcript ACA1_395550A; uncharacterized protein	complement(join(204949..205503,205590..205793,205874..205985,206119..206585,206598..207215))	Acanthamoeba castellanii str. Neff	14919519
ACA1_298630	CDS	ACA1_298630	NW_004457496.1	1257	6322	R	encoded by transcript ACA1_298630A; vacuolar protein sorting 16, putative	complement(join(1257..1310,1393..1491,1626..1727,1884..1994,2040..2046,2067..2242,2326..2403,2524..2726,2838..2946,3046..3177,3287..3419,3544..3671,3762..3855,3952..4060,4168..4324,4416..4522,4648..4723,4863..4993,5130..5235,5347..5428,5590..5660,5756..5862,5963..6045,6192..6322))	Acanthamoeba castellanii str. Neff	14919423
ACA1_298640	CDS	ACA1_298640	NW_004457496.1	7058	9092	D	encoded by transcript ACA1_298640A; Vtype proton ATPase subunit C, putative	join(7058..7385,7551..7645,7777..7868,7974..8069,8163..8231,8309..8401,8499..8592,8698..8788,8866..9092)	Acanthamoeba castellanii str. Neff	14919432
ACA1_298650	CDS	ACA1_298650	NW_004457496.1	9394	12759	D	encoded by transcript ACA1_298650A; uncharacterized protein	join(9394..9546,9652..9893,10019..10175,10272..10347,10472..10581,10682..10923,11142..11284,11411..11642,11776..11902,12041..12188,12278..12456,12493..12759)	Acanthamoeba castellanii str. Neff	14919424
ACA1_298660	CDS	ACA1_298660	NW_004457496.1	13186	18158	D	encoded by transcript ACA1_298660A; AT hook motif domain containing protein	join(13186..13238,13361..13419,13552..13704,13942..14119,14215..14321,14413..14804,14891..14957,15027..15906,16012..16141,16269..16355,16479..17447,17652..18158)	Acanthamoeba castellanii str. Neff	14919425
ACA1_298670	CDS	ACA1_298670	NW_004457496.1	18220	21447	R	encoded by transcript ACA1_298670A; dolichyl pyrophosphate glc1man9glcnac2 alpha1,3-glucosyltransferase, putative	complement(join(18220..18535,18701..18794,18985..19082,19213..19352,19499..19607,19761..19876,20004..20396,20508..20581,20683..20774,20887..21080,21192..21270,21356..21447))	Acanthamoeba castellanii str. Neff	14919426
ACA1_298780	CDS	ACA1_298780	NW_004457496.1	22392	24148	D	encoded by transcript ACA1_298780A; LIM domain containing protein	join(22392..22619,22728..22797,22880..23283,23437..23543,23664..23912,23989..24148)	Acanthamoeba castellanii str. Neff	14919427
ACA1_298790	CDS	ACA1_298790	NW_004457496.1	24390	28708	D	encoded by transcript ACA1_298790A; 3'5' exonuclease domain containing protein	join(24390..24743,24844..24921,25021..25159,25292..25367,25436..25547,25606..25762,25894..26060,26182..26363,26473..26689,26764..26944,27061..27288,27403..27455,27551..27695,27794..28060,28168..28479,28587..28708)	Acanthamoeba castellanii str. Neff	14919428
ACA1_298800	CDS	ACA1_298800	NW_004457496.1	28875	32784	R	encoded by transcript ACA1_298800A; protein kinase domain containing protein	complement(join(28875..28994,29065..29439,29539..29623,29708..29845,29962..30131,30247..30342,30458..30553,30664..30816,30917..30969,31067..31309,31426..31504,31636..31707,31820..31913,32064..32382,32414..32606,32707..32784))	Acanthamoeba castellanii str. Neff	14919429
ACA1_298810	CDS	ACA1_298810	NW_004457496.1	33229	34755	R	encoded by transcript ACA1_298810A; uncharacterized protein	complement(join(33229..33344,33448..33702,33836..33926,34013..34138,34209..34362,34459..34565,34651..34755))	Acanthamoeba castellanii str. Neff	14919430
ACA1_298820	CDS	ACA1_298820	NW_004457496.1	35154	36197	D	encoded by transcript ACA1_298820A; uncharacterized protein	join(35154..35229,35467..36197)	Acanthamoeba castellanii str. Neff	14919431
ACA1_298830	CDS	ACA1_298830	NW_004457496.1	36316	38195	D	encoded by transcript ACA1_298830A; uncharacterized protein	join(36316..36992,37023..37107,37168..38034,38046..38195)	Acanthamoeba castellanii str. Neff	14919419
ACA1_298840	CDS	ACA1_298840	NW_004457496.1	38635	39473	R	encoded by transcript ACA1_298840A; glycosyltransferase family 28 Cterminal domain containing protein	complement(join(38635..38766,38972..39081,39176..39473))	Acanthamoeba castellanii str. Neff	14919420
ACA1_298850	CDS	ACA1_298850	NW_004457496.1	39847	42647	D	encoded by transcript ACA1_298850A; Protein transport protein sec23, putative	join(39847..40263,40372..40560,40692..40874,40986..41498,41589..41957,42041..42121,42207..42647)	Acanthamoeba castellanii str. Neff	14919421
ACA1_298860	CDS	ACA1_298860	NW_004457496.1	42810	46079	R	encoded by transcript ACA1_298860A; histidine kinase A family protein	complement(join(42810..43187,43325..43364,43382..43432,43506..43760,43901..44001,44149..44245,44339..44532,44702..44856,44969..45069,45160..45449,45576..45743,45818..45893,45970..46079))	Acanthamoeba castellanii str. Neff	14919422
ACA1_313850	CDS	ACA1_313850	NW_004457493.1	43	1378	D	encoded by transcript ACA1_313850A; PAS, putative	join(43..408,483..639,708..964,1036..1187,1276..1378)	Acanthamoeba castellanii str. Neff	14919413
ACA1_313860	CDS	ACA1_313860	NW_004457493.1	1619	4965	R	encoded by transcript ACA1_313860A; inorganic anion transporter, sulfate permease (SulP) subfamily protein	complement(join(1619..1919,1999..2108,2203..2645,2715..2976,3028..3082,3243..3363,3472..3562,3694..3887,3976..4053,4140..4965))	Acanthamoeba castellanii str. Neff	14919415
ACA1_313870	CDS	ACA1_313870	NW_004457493.1	5431	7418	R	encoded by transcript ACA1_313870A; racemase, putative	complement(join(5431..5653,5724..5824,5903..6022,6093..6215,6285..6347,6394..6609,6680..6831,6874..6943,7099..7299,7413..7418))	Acanthamoeba castellanii str. Neff	14919417
ACA1_313890	CDS	ACA1_313890	NW_004457493.1	10259	10732	D	encoded by transcript ACA1_313890A; uncharacterized protein	10259..10732	Acanthamoeba castellanii str. Neff	14919418
ACA1_313900	CDS	ACA1_313900	NW_004457493.1	10821	14425	D	encoded by transcript ACA1_313900A; premRNA splicing factor, putative	join(10821..10943,11005..11077,11161..11276,11370..11468,11571..11698,11751..11822,11907..12043,12132..12236,12311..12386,12479..12569,12643..12756,12828..12959,13037..13195,13285..13386,13472..13637,13721..13848,13928..14068,14157..14276,14363..14425)	Acanthamoeba castellanii str. Neff	14919414
ACA1_153830	CDS	ACA1_153830	NW_004457490.1	22	2169	R	encoded by transcript ACA1_153830A; RNA binding, putative	complement(join(<22..77,190..300,416..492,578..640,737..795,878..962,1068..1166,1934..>2169))	Acanthamoeba castellanii str. Neff	14919409
ACA1_153940	CDS	ACA1_153940	NW_004457490.1	5135	5563	R	encoded by transcript ACA1_153940A; uncharacterized protein	complement(join(5135..5308,5324..5563))	Acanthamoeba castellanii str. Neff	14919412
ACA1_153950	CDS	ACA1_153950	NW_004457490.1	6816	10799	R	encoded by transcript ACA1_153950A; sedolisinlike peptidase	complement(join(6816..6897,6990..7071,7259..7441,7527..7580,7661..7775,7901..8001,8081..8323,8443..8538,8615..8686,8783..8927,9020..9150,9218..9273,9356..9447,10581..10799))	Acanthamoeba castellanii str. Neff	14919410
ACA1_154060	CDS	ACA1_154060	NW_004457490.1	12479	14708	R	encoded by transcript ACA1_154060A; uncharacterized protein	complement(join(12479..12694,12806..12871,12984..13065,13175..13312,13414..13502,13635..13757,13883..14041,14193..14267,14403..14504,14676..14708))	Acanthamoeba castellanii str. Neff	14919411
ACA1_154170	CDS	ACA1_154170	NW_004457490.1	15712	17361	D	encoded by transcript ACA1_154170A; zinc transporter ZupT, putative	join(15712..16003,16091..16171,16270..16402,16534..16652,16721..16808,16933..17022,17105..17184,17267..17361)	Acanthamoeba castellanii str. Neff	14919351
ACA1_154180	CDS	ACA1_154180	NW_004457490.1	17592	18478	D	encoded by transcript ACA1_154180A; shortchain dehydrogenase/reductase SDR, putative	join(17592..18071,18215..18478)	Acanthamoeba castellanii str. Neff	14919352
ACA1_154190	CDS	ACA1_154190	NW_004457490.1	18522	19490	R	encoded by transcript ACA1_154190A; uncharacterized protein	complement(join(18522..18654,18715..18865,18980..19211,19320..19490))	Acanthamoeba castellanii str. Neff	14919403
ACA1_154200	CDS	ACA1_154200	NW_004457490.1	19751	23334	R	encoded by transcript ACA1_154200A; Prokumamolisin, activation domain containing protein	complement(join(19751..19917,20006..20188,20257..20425,20548..20651,20724..20792,20869..21030,21138..21233,21310..21381,21472..21616,21714..21844,21978..22131,22224..22387,22475..22576,22650..22748,22811..22879,22953..23031,23140..23334))	Acanthamoeba castellanii str. Neff	14919404
ACA1_154210	CDS	ACA1_154210	NW_004457490.1	23487	25636	R	encoded by transcript ACA1_154210A; BadF/BadG/BcrA/BcrD ATPase superfamily protein	complement(join(23487..23654,23751..23845,23903..24002,24143..24251,24325..24429,24492..24568,24644..24699,24778..24928,25037..25131,25213..25331,25611..25636))	Acanthamoeba castellanii str. Neff	14919405
ACA1_154220	CDS	ACA1_154220	NW_004457490.1	25799	27284	D	encoded by transcript ACA1_154220A; pyridoxalphosphate dependent superfamily protein	join(25799..25901,26019..26343,26423..26552,26625..26764,26882..27284)	Acanthamoeba castellanii str. Neff	14919406
ACA1_154230	CDS	ACA1_154230	NW_004457490.1	27779	28705	D	encoded by transcript ACA1_154230A; uncharacterized protein	join(27779..27824,27949..28044,28122..28173,28268..28525,28654..28705)	Acanthamoeba castellanii str. Neff	14919407
ACA1_154240	CDS	ACA1_154240	NW_004457490.1	28897	31403	R	encoded by transcript ACA1_154240A; Fbox domain containing protein	complement(join(28897..28966,29060..29155,29274..29329,29378..29443,29527..29660,29764..29860,29949..30005,30075..30261,30393..30502,30599..30739,30871..30922,31051..31109,31194..31403))	Acanthamoeba castellanii str. Neff	14919408
ACA1_154250	CDS	ACA1_154250	NW_004457490.1	31771	33583	D	encoded by transcript ACA1_154250A; uncharacterized protein	join(31771..31906,32000..32569,32682..32810,32910..33078,33158..33315,33414..33583)	Acanthamoeba castellanii str. Neff	14919353
ACA1_154260	CDS	ACA1_154260	NW_004457490.1	34658	35034	D	encoded by transcript ACA1_154260A; uncharacterized protein	join(34658..34818,34920..>35034)	Acanthamoeba castellanii str. Neff	14919354
ACA1_154270	CDS	ACA1_154270	NW_004457490.1	36638	37292	D	encoded by transcript ACA1_154270A; uncharacterized protein	join(36638..36668,36982..37110,37213..37292)	Acanthamoeba castellanii str. Neff	14919355
ACA1_154290	CDS	ACA1_154290	NW_004457490.1	39907	44536	R	encoded by transcript ACA1_154290A; uncharacterized protein	complement(join(39907..40004,40100..40206,40385..40485,40571..40659,40793..40904,40997..41081,41208..41299,43331..43431,43532..43601,43700..43876,43894..44062,44086..44196,44430..44536))	Acanthamoeba castellanii str. Neff	14919357
ACA1_154400	CDS	ACA1_154400	NW_004457490.1	44596	49849	R	encoded by transcript ACA1_154400A; RasGEF domain containing protein	complement(join(44596..44774,44859..45133,45223..46348,46446..46795,46823..46871,46950..47869,47932..48104,48198..48349,48408..48635,48743..48881,48963..49080,49163..49364,49502..49530,49620..49849))	Acanthamoeba castellanii str. Neff	14919358
ACA1_154410	CDS	ACA1_154410	NW_004457490.1	50309	52471	D	encoded by transcript ACA1_154410A; uncharacterized protein	join(50309..50771,50829..50939,50999..51116,51179..51273,51347..51374,51450..51556,51673..51730,51772..51901,52005..52218,52287..52471)	Acanthamoeba castellanii str. Neff	14919359
ACA1_154540	CDS	ACA1_154540	NW_004457490.1	61535	63482	R	encoded by transcript ACA1_154540A; alcohol dehydrogenase, zinccontaining, putative	complement(join(61535..61636,61765..61885,62122..62206,62306..62362,62417..62495,62574..62660,62729..62854,62915..63039,63120..63186,63263..63370,63432..63482))	Acanthamoeba castellanii str. Neff	14919362
ACA1_154550	CDS	ACA1_154550	NW_004457490.1	63728	66582	D	encoded by transcript ACA1_154550A; antioxidant, AhpC/TSA superfamily protein	join(63728..63848,63924..63979,64072..64266,64293..64358,64454..64577,64675..64790,64889..64999,65086..65233,65329..65438,65526..65721,65814..65917,65952..66068,66254..66370,66457..66582)	Acanthamoeba castellanii str. Neff	14919363
ACA1_154560	CDS	ACA1_154560	NW_004457490.1	67461	68182	D	encoded by transcript ACA1_154560A; class II glutamine amidotransferase domain containing protein	join(67461..67979,68156..68182)	Acanthamoeba castellanii str. Neff	14919364
ACA1_154670	CDS	ACA1_154670	NW_004457490.1	68935	72938	D	encoded by transcript ACA1_154670A; class II glutamine amidotransferase/glutamate synthase central domain containing protein	join(68935..69619,69707..69857,69970..70053,70137..70536,70631..71183,71252..71391,71462..71616,71707..72028,72080..72152,72244..72382,72479..72650,72738..72938)	Acanthamoeba castellanii str. Neff	14919365
ACA1_154680	CDS	ACA1_154680	NW_004457490.1	72980	77569	D	encoded by transcript ACA1_154680A; glutamate synthase, NADH/NADPH, small subunit	join(72980..73152,73228..73316,73397..73662,73736..73840,73940..74000,74136..74458,74529..75113,75275..75393,75472..75755,75875..76011,76086..76142,76363..77380,77478..77569)	Acanthamoeba castellanii str. Neff	14919366
ACA1_154690	CDS	ACA1_154690	NW_004457490.1	77658	80210	D	encoded by transcript ACA1_154690A; Fbox domain containing protein	join(77658..77713,77807..78020,78121..78274,78373..78498,78652..78734,78928..79019,79034..79079,79209..79371,79450..79531,79673..79758,79864..80023,80159..80210)	Acanthamoeba castellanii str. Neff	14919367
ACA1_154700	CDS	ACA1_154700	NW_004457490.1	80299	80646	R	encoded by transcript ACA1_154700A; uncharacterized protein	complement(80299..80646)	Acanthamoeba castellanii str. Neff	14919368
ACA1_154710	CDS	ACA1_154710	NW_004457490.1	80782	86899	R	encoded by transcript ACA1_154710A; thioester reductase subfamily protein	complement(join(80782..80916,81005..81102,81183..81456,81562..81631,81750..81874,81981..82111,82205..82463,82572..82711,82818..83058,83265..83312,83386..83508,83584..83655,83775..83846,83949..84033,84121..84246,84357..84478,84663..84750,84823..84944,85031..85077,85145..85232,85336..85500,85582..85671,85756..85917,86031..86107,86338..86389,86467..86711,86803..86899))	Acanthamoeba castellanii str. Neff	14919383
ACA1_154720	CDS	ACA1_154720	NW_004457490.1	88699	89818	D	encoded by transcript ACA1_154720A; SNARE domain containing protein	join(88699..89080,89092..89159,89273..89600,89682..89818)	Acanthamoeba castellanii str. Neff	14919384
ACA1_154730	CDS	ACA1_154730	NW_004457490.1	90023	91859	D	encoded by transcript ACA1_154730A; protein kinase domain containing protein	join(90023..90479,90591..90693,90789..90865,90988..91129,91221..91295,91387..91444,91528..91600,91795..91859)	Acanthamoeba castellanii str. Neff	14919385
ACA1_154840	CDS	ACA1_154840	NW_004457490.1	93085	94563	D	encoded by transcript ACA1_154840A; mitogen-activated protein kinase kinase kinase	join(93085..93274,93651..93713,93837..93905,94023..94082,94160..94563)	Acanthamoeba castellanii str. Neff	14919386
ACA1_154950	CDS	ACA1_154950	NW_004457490.1	94859	96223	D	encoded by transcript ACA1_154950A; uncharacterized protein	join(94859..95101,95170..95690,95796..96153,96218..96223)	Acanthamoeba castellanii str. Neff	14919387
ACA1_155060	CDS	ACA1_155060	NW_004457490.1	96831	98579	D	encoded by transcript ACA1_155060A; uncharacterized protein	join(96831..96850,97143..97492,97565..97704,97792..97943,98048..98579)	Acanthamoeba castellanii str. Neff	14919388
ACA1_155070	CDS	ACA1_155070	NW_004457490.1	98871	99858	D	encoded by transcript ACA1_155070A; methyltransferase domain containing protein	join(98871..99039,99158..99858)	Acanthamoeba castellanii str. Neff	14919389
ACA1_155080	CDS	ACA1_155080	NW_004457490.1	99964	101692	R	encoded by transcript ACA1_155080A; uncharacterized protein	complement(join(99964..100815,100847..101692))	Acanthamoeba castellanii str. Neff	14919390
ACA1_155090	CDS	ACA1_155090	NW_004457490.1	101978	104361	R	encoded by transcript ACA1_155090A; gammabutyrobetaine dioxygenase	complement(join(101978..102064,102199..102389,102483..102553,102691..102794,102926..103036,103081..103201,103288..103399,103510..103718,103808..103929,104019..104066,104144..104209,104320..104361))	Acanthamoeba castellanii str. Neff	14919391
ACA1_155100	CDS	ACA1_155100	NW_004457490.1	104599	105629	D	encoded by transcript ACA1_155100A; Tim10/DDP family zinc finger superfamily protein	join(104599..104769,105217..105294,105351..105404,105534..105629)	Acanthamoeba castellanii str. Neff	14919392
ACA1_155110	CDS	ACA1_155110	NW_004457490.1	106063	107524	R	encoded by transcript ACA1_155110A; cyclin, Nterminal domain containing protein	complement(join(106063..106123,106207..106366,106456..106621,106714..106838,106963..107524))	Acanthamoeba castellanii str. Neff	14919393
ACA1_155120	CDS	ACA1_155120	NW_004457490.1	108185	109426	R	encoded by transcript ACA1_155120A; uncharacterized protein	complement(join(108185..108263,108358..108450,108558..108635,108728..108825,108899..109070,109083..109159,109231..109354,109383..>109426))	Acanthamoeba castellanii str. Neff	14919394
ACA1_155130	CDS	ACA1_155130	NW_004457490.1	110430	116207	D	encoded by transcript ACA1_155130A; RhoGEF domain containing protein	join(110430..110507,110607..110690,110772..111073,111189..111308,111417..111599,111749..112143,112239..112304,112442..112884,112974..113075,113178..113282,113369..113458,113545..113706,113783..113907,113992..114056,114128..114213,114333..114416,114581..114722,114851..114927,114998..115123,115205..115345,115415..115552,115688..115825,115902..115988,116106..116207)	Acanthamoeba castellanii str. Neff	14919395
ACA1_155140	CDS	ACA1_155140	NW_004457490.1	116325	117258	D	encoded by transcript ACA1_155140A; Maflike protein	join(116325..116522,116638..116803,116941..117060,117149..117258)	Acanthamoeba castellanii str. Neff	14919396
ACA1_155150	CDS	ACA1_155150	NW_004457490.1	117218	117627	R	encoded by transcript ACA1_155150A; uncharacterized protein	complement(join(117218..117461,117575..117627))	Acanthamoeba castellanii str. Neff	14919397
ACA1_155160	CDS	ACA1_155160	NW_004457490.1	117818	118596	D	encoded by transcript ACA1_155160A; uncharacterized protein	join(117818..118088,118238..118596)	Acanthamoeba castellanii str. Neff	14919398
ACA1_155170	CDS	ACA1_155170	NW_004457490.1	118796	119617	D	encoded by transcript ACA1_155170A; uncharacterized protein	join(118796..118975,119060..119120,119280..119371,119456..119617)	Acanthamoeba castellanii str. Neff	14919399
ACA1_155180	CDS	ACA1_155180	NW_004457490.1	119761	120296	D	encoded by transcript ACA1_155180A; saposin B domain containing protein	join(119761..119875,119953..120138,120256..120296)	Acanthamoeba castellanii str. Neff	14919400
ACA1_155190	CDS	ACA1_155190	NW_004457490.1	120392	121739	R	encoded by transcript ACA1_155190A; NAD dependent epimerase/dehydratase superfamily protein	complement(join(120392..120553,120584..120747,120861..121128,121270..121399,121483..121586,121689..121739))	Acanthamoeba castellanii str. Neff	14919401
ACA1_155200	CDS	ACA1_155200	NW_004457490.1	122001	123031	R	encoded by transcript ACA1_155200A; uncharacterized protein	complement(join(122001..122662,122698..122821,122870..123031))	Acanthamoeba castellanii str. Neff	14919402
ACA1_155210	CDS	ACA1_155210	NW_004457490.1	124548	126594	R	encoded by transcript ACA1_155210A; premRNA cleavage complex subunit	complement(join(124548..124653,124774..125078,125161..125222,125321..125494,125612..125747,125851..125910,126061..126408,126502..126594))	Acanthamoeba castellanii str. Neff	14919313
ACA1_155220	CDS	ACA1_155220	NW_004457490.1	126833	128118	D	encoded by transcript ACA1_155220A; uncharacterized protein	join(126833..127021,127098..127174,127262..127369,127441..127592,127665..127830,127903..128035,128110..128118)	Acanthamoeba castellanii str. Neff	14919314
ACA1_155230	CDS	ACA1_155230	NW_004457490.1	128364	130857	D	encoded by transcript ACA1_155230A; uncharacterized protein	join(128364..128672,128917..129006,129091..129225,129345..129480,129516..129659,129739..129911,130005..130060,130139..130234,130319..130424,130570..130691,130752..130857)	Acanthamoeba castellanii str. Neff	14919315
ACA1_155240	CDS	ACA1_155240	NW_004457490.1	130935	132656	R	encoded by transcript ACA1_155240A; uncharacterized protein	complement(join(130935..131051,131149..131252,131329..131391,131491..131568,131671..131752,131878..131962,132037..132088,132183..132309,132395..132476,132556..132656))	Acanthamoeba castellanii str. Neff	14919316
ACA1_155260	CDS	ACA1_155260	NW_004457490.1	134078	135783	R	encoded by transcript ACA1_155260A; XPG Iregion domain containing protein	complement(join(134078..134626,134756..134898,134996..135079,135173..135621,135704..135783))	Acanthamoeba castellanii str. Neff	14919318
ACA1_155270	CDS	ACA1_155270	NW_004457490.1	136295	137780	D	encoded by transcript ACA1_155270A; PhytanoylCoA dioxygenase (PhyH) superfamily protein	join(136295..136505,136576..136751,136844..136994,137125..137531,137598..137780)	Acanthamoeba castellanii str. Neff	14919319
ACA1_155280	CDS	ACA1_155280	NW_004457490.1	139006	140425	R	encoded by transcript ACA1_155280A; betainehomocysteine methyltransferase	complement(join(139006..139151,139277..139550,139609..139871,139978..140092,140246..140425))	Acanthamoeba castellanii str. Neff	14919320
ACA1_155290	CDS	ACA1_155290	NW_004457490.1	140817	141373	R	encoded by transcript ACA1_155290A; uncharacterized protein	complement(join(140817..140947,140968..141373))	Acanthamoeba castellanii str. Neff	14919321
ACA1_155300	CDS	ACA1_155300	NW_004457490.1	142877	144011	R	encoded by transcript ACA1_155300A; receptor protein-tyrosine kinase	complement(join(142877..143086,143181..143388,143499..143552,143659..143782,143861..144011))	Acanthamoeba castellanii str. Neff	14919322
ACA1_155310	CDS	ACA1_155310	NW_004457490.1	144145	145883	R	encoded by transcript ACA1_155310A; uncharacterized protein	complement(join(144145..144274,144556..144799,144876..145003,145287..145497,145589..145883))	Acanthamoeba castellanii str. Neff	14919323
ACA1_155420	CDS	ACA1_155420	NW_004457490.1	146128	148115	D	encoded by transcript ACA1_155420A; WD domain, Gbeta repeat-containing protein	join(146128..146172,146353..146465,146595..146680,146848..146934,147061..147209,147304..147397,147524..147617,147688..147738,147753..147779,147869..147947,148026..148115)	Acanthamoeba castellanii str. Neff	14919324
ACA1_155430	CDS	ACA1_155430	NW_004457490.1	148224	150025	D	encoded by transcript ACA1_155430A; uncharacterized protein	join(148224..148250,148359..148413,148536..148699,148823..149365,149470..149559,149639..149864,149889..150025)	Acanthamoeba castellanii str. Neff	14919325
ACA1_155440	CDS	ACA1_155440	NW_004457490.1	150093	158123	R	encoded by transcript ACA1_155440A; phosphoinositide 3kinase family, accessory domain (pik domain) domain containing protein	complement(join(150093..150281,150368..150573,150658..150859,150952..151071,151148..151273,151400..151603,151679..151894,151976..152124,152244..152486,152609..152921,152993..153111,153244..153352,153645..153773,153858..153972,154125..154305,154380..154464,154550..154714,154828..155130,155298..155381,155516..155629,155705..155770,155841..156161,156247..156400,156549..156953,157034..157406,157518..157641,157758..157832,158100..158123))	Acanthamoeba castellanii str. Neff	14919326
ACA1_155450	CDS	ACA1_155450	NW_004457490.1	158542	160990	R	encoded by transcript ACA1_155450A; pigment precursor permease subfamily protein	complement(join(158542..158822,158921..159229,159330..159731,159808..160435,160577..160990))	Acanthamoeba castellanii str. Neff	14919327
ACA1_155460	CDS	ACA1_155460	NW_004457490.1	162085	163218	R	encoded by transcript ACA1_155460A; uncharacterized protein	complement(join(162085..162267,162347..162605,162682..162818,162916..163218))	Acanthamoeba castellanii str. Neff	14919328
ACA1_155470	CDS	ACA1_155470	NW_004457490.1	163315	165362	R	encoded by transcript ACA1_155470A; ATPase, AAA domain containing protein	complement(join(163315..163461,163565..164011,164143..164363,164436..164626,164710..164879,164963..165157,165240..165362))	Acanthamoeba castellanii str. Neff	14919329
ACA1_155480	CDS	ACA1_155480	NW_004457490.1	166491	167226	R	encoded by transcript ACA1_155480A; ubiquitin conjugating enzyme, putative	complement(join(166491..166682,166746..166808,166900..166977,167086..>167226))	Acanthamoeba castellanii str. Neff	14919330
ACA1_155490	CDS	ACA1_155490	NW_004457490.1	168260	174195	D	encoded by transcript ACA1_155490A; Alphamannosidase 2C1, putative	join(168260..168397,168617..168664,168787..169002,169146..169214,169401..169487,169574..169703,169799..169844,169954..170002,170042..170107,170144..170227,170419..170503,170541..170650,170752..170812,170879..170970,171073..171273,171474..171573,171690..171766,171867..171991,172081..172172,172257..172328,172400..172449,172465..172563,172657..172739,172896..173067,173186..173323,173406..173504,173643..173720,173803..174195)	Acanthamoeba castellanii str. Neff	14919331
ACA1_155500	CDS	ACA1_155500	NW_004457490.1	174284	177333	R	encoded by transcript ACA1_155500A; Cofactor of BRCA1 (COBRA1)	complement(join(174284..174742,174858..174932,175266..175562,175677..175774,175878..176103,176240..176344,176389..176554,176677..176941,177041..177151,177324..177333))	Acanthamoeba castellanii str. Neff	14919332
ACA1_155510	CDS	ACA1_155510	NW_004457490.1	177761	178970	R	encoded by transcript ACA1_155510A; uncharacterized protein	complement(join(177761..178876,178965..178970))	Acanthamoeba castellanii str. Neff	14919333
ACA1_155520	CDS	ACA1_155520	NW_004457490.1	179241	180152	D	encoded by transcript ACA1_155520A; acetyltransferase, GNAT superfamily protein	join(179241..179342,179437..179662,179861..179983,180058..180152)	Acanthamoeba castellanii str. Neff	14919334
ACA1_155530	CDS	ACA1_155530	NW_004457490.1	180501	181591	D	encoded by transcript ACA1_155530A; Cathepsin L precursor (Cysteine proteinase 1), putative	join(180501..180906,180975..181591)	Acanthamoeba castellanii str. Neff	14919335
ACA1_155540	CDS	ACA1_155540	NW_004457490.1	181651	182250	R	encoded by transcript ACA1_155540A; uncharacterized protein	complement(181651..182250)	Acanthamoeba castellanii str. Neff	14919336
ACA1_155550	CDS	ACA1_155550	NW_004457490.1	182937	184619	D	encoded by transcript ACA1_155550A; serine proteinase	join(182937..183052,183155..183257,183358..183455,183683..183848,183933..184089,184156..184619)	Acanthamoeba castellanii str. Neff	14919337
ACA1_155560	CDS	ACA1_155560	NW_004457490.1	184830	186822	R	encoded by transcript ACA1_155560A; aspartate aminotransferase, cytoplasmic, putative	complement(join(184830..185112,185185..185350,185451..185562,185646..185789,185897..186009,186085..186202,186313..186444,186568..186822))	Acanthamoeba castellanii str. Neff	14919338
ACA1_155570	CDS	ACA1_155570	NW_004457490.1	188518	189478	R	encoded by transcript ACA1_155570A; leucine rich repeat domain containing protein	complement(join(188518..189145,189258..189478))	Acanthamoeba castellanii str. Neff	14919339
ACA1_155580	CDS	ACA1_155580	NW_004457490.1	190416	193355	D	encoded by transcript ACA1_155580A; chitin synthase	join(190416..190523,190593..191037,191131..191341,191456..191594,191688..191870,191941..192103,192176..192598,192715..193355)	Acanthamoeba castellanii str. Neff	14919340
ACA1_155590	CDS	ACA1_155590	NW_004457490.1	194423	195754	R	encoded by transcript ACA1_155590A; RNA recognition motif domain containing protein	complement(join(194423..194524,194604..194926,195062..195453,195512..195609,195695..195754))	Acanthamoeba castellanii str. Neff	14919341
ACA1_155600	CDS	ACA1_155600	NW_004457490.1	195941	197153	D	encoded by transcript ACA1_155600A; uncharacterized protein	join(195941..196105,196281..196346,196434..196564,196610..197000,197082..197153)	Acanthamoeba castellanii str. Neff	14919342
ACA1_155610	CDS	ACA1_155610	NW_004457490.1	197284	200125	D	encoded by transcript ACA1_155610A; RNA recognition motif domain containing protein	join(197284..197863,197943..198043,198120..198290,198369..198475,198697..199066,199158..199616,199699..199888,200013..200125)	Acanthamoeba castellanii str. Neff	14919343
ACA1_155620	CDS	ACA1_155620	NW_004457490.1	200602	201945	D	encoded by transcript ACA1_155620A; uncharacterized protein	<200602..201945	Acanthamoeba castellanii str. Neff	14919344
ACA1_155630	CDS	ACA1_155630	NW_004457490.1	202091	204192	R	encoded by transcript ACA1_155630A; ankyrin repeat protein	complement(join(202091..202191,202261..202306,202376..202490,202572..202633,202733..202829,202919..203047,203133..203242,203373..203548,203857..204000,204105..204192))	Acanthamoeba castellanii str. Neff	14919345
ACA1_155640	CDS	ACA1_155640	NW_004457490.1	204346	207426	R	encoded by transcript ACA1_155640A; vacuolar sorting protein 9 (vps9) domain containing protein	complement(join(204346..205363,205552..205693,205774..205923,206029..206150,206187..206305,206421..206577,206681..206730,206806..206918,207050..207151,207270..207426))	Acanthamoeba castellanii str. Neff	14919346
ACA1_155650	CDS	ACA1_155650	NW_004457490.1	207478	208907	R	encoded by transcript ACA1_155650A; metallobeta-lactamase domain containing protein	complement(join(207478..207696,207809..208110,208200..208582,208687..208907))	Acanthamoeba castellanii str. Neff	14919347
ACA1_155660	CDS	ACA1_155660	NW_004457490.1	209470	211169	D	encoded by transcript ACA1_155660A; dual specificity phosphatase 12, putative	join(209470..209610,209775..209862,210161..210204,210282..210441,210528..210653,210751..211011,211102..211169)	Acanthamoeba castellanii str. Neff	14919348
ACA1_155670	CDS	ACA1_155670	NW_004457490.1	211603	213258	D	encoded by transcript ACA1_155670A; SPRY domain containing protein	join(211603..211866,211978..212071,212178..212265,212358..212467,212577..212658,212739..212842,212957..213053,213147..213258)	Acanthamoeba castellanii str. Neff	14919349
ACA1_155680	CDS	ACA1_155680	NW_004457490.1	213424	214090	R	encoded by transcript ACA1_155680A; uncharacterized protein	complement(join(213424..213526,213652..213959,214022..214090))	Acanthamoeba castellanii str. Neff	14919350
ACA1_155690	CDS	ACA1_155690	NW_004457490.1	214648	216522	D	encoded by transcript ACA1_155690A; NADP oxidoreductase coenzyme F420-dependent protein	214648..216522	Acanthamoeba castellanii str. Neff	14919369
ACA1_155700	CDS	ACA1_155700	NW_004457490.1	216665	221607	R	encoded by transcript ACA1_155700A; condensin complex component SMC1, putative	complement(join(216665..216739,216815..217241,217331..217554,217637..217767,217876..217978,218051..218330,218426..218966,219048..219294,219362..219478,219568..220233,220309..220542,220641..220877,221016..221338,221408..221492,221575..221607))	Acanthamoeba castellanii str. Neff	14919370
ACA1_155710	CDS	ACA1_155710	NW_004457490.1	221787	223898	R	encoded by transcript ACA1_155710A; Hypothetical protein	complement(join(221787..222182,222249..222498,222585..222709,222810..222905,222989..223089,223156..223275,223353..223532,223646..223694,223827..223898))	Acanthamoeba castellanii str. Neff	14919371
ACA1_155730	CDS	ACA1_155730	NW_004457490.1	226098	229294	R	encoded by transcript ACA1_155730A; uncharacterized protein	complement(join(226098..226248,226293..226449,226531..226623,226735..226846,226905..227079,227159..227277,227495..227593,227670..227822,227897..227989,228079..228165,228259..228356,228488..228538,228627..228771,228863..228932,229000..229041,229137..>229294))	Acanthamoeba castellanii str. Neff	14919373
ACA1_155740	CDS	ACA1_155740	NW_004457490.1	229908	233909	D	encoded by transcript ACA1_155740A; Ras subfamily protein	join(229908..230006,230086..230234,230392..230842,231015..231243,231337..231413,231511..231828,231927..232183,232207..232339,232359..232421,232514..232622,232706..232803,232916..233024,233112..233239,233331..233432,233549..233591,233676..233731,233814..233909)	Acanthamoeba castellanii str. Neff	14919374
ACA1_155750	CDS	ACA1_155750	NW_004457490.1	234120	234765	D	encoded by transcript ACA1_155750A; uncharacterized protein	join(234120..234124,234254..234342,234455..234765)	Acanthamoeba castellanii str. Neff	14919375
ACA1_155760	CDS	ACA1_155760	NW_004457490.1	235242	236182	D	encoded by transcript ACA1_155760A; phosphoribosyltransferase	join(235242..235363,235474..235775,235844..235951,236040..236182)	Acanthamoeba castellanii str. Neff	14919376
ACA1_155770	CDS	ACA1_155770	NW_004457490.1	236811	237504	R	encoded by transcript ACA1_155770A; paired amphipathic helix repeat-containing protein	complement(join(236811..237036,237299..237504))	Acanthamoeba castellanii str. Neff	14919377
ACA1_155780	CDS	ACA1_155780	NW_004457490.1	238125	239911	D	encoded by transcript ACA1_155780A; F-box domain containing protein	join(238125..238339,238414..238499,238612..238753,238796..239013,239102..239178,239254..239316,239408..239911)	Acanthamoeba castellanii str. Neff	14919378
ACA1_155790	CDS	ACA1_155790	NW_004457490.1	240720	243795	D	encoded by transcript ACA1_155790A; uncharacterized protein	join(240720..240890,240972..241054,241166..241310,241400..241501,241592..243481,243577..243795)	Acanthamoeba castellanii str. Neff	14919379
ACA1_155800	CDS	ACA1_155800	NW_004457490.1	243923	244219	R	encoded by transcript ACA1_155800A; uncharacterized protein	complement(243923..244219)	Acanthamoeba castellanii str. Neff	14919380
ACA1_155810	CDS	ACA1_155810	NW_004457490.1	244462	247203	D	encoded by transcript ACA1_155810A; Fructose6-phosphate-2-kinase, putative	join(244462..244747,244838..244899,245016..245102,245204..245308,245405..245570,245666..245711,245788..245889,245978..246101,246178..246426,246532..246604,246669..246760,246853..247203)	Acanthamoeba castellanii str. Neff	14919381
ACA1_155820	CDS	ACA1_155820	NW_004457490.1	248440	250281	D	encoded by transcript ACA1_155820A; Tubulin/FtsZ family, GTPase domain containing protein	join(248440..248776,248895..249059,249161..249266,249348..249505,249596..249718,249822..249889,250165..>250281)	Acanthamoeba castellanii str. Neff	14919382
ACA1_044360	CDS	ACA1_044360	NW_004457486.1	383	3477	R	encoded by transcript ACA1_044360A; uncharacterized protein	complement(join(383..421,536..603,685..1248,1800..2087,2216..2351,2440..2576,2661..2772,3055..3174,3415..3477))	Acanthamoeba castellanii str. Neff	14919312
ACA1_044370	CDS	ACA1_044370	NW_004457486.1	4198	4972	D	encoded by transcript ACA1_044370A; uncharacterized protein	join(<4198..4249,4372..4510,4936..4972)	Acanthamoeba castellanii str. Neff	14919304
ACA1_044380	CDS	ACA1_044380	NW_004457486.1	5706	7164	D	encoded by transcript ACA1_044380A; uncharacterized protein	join(5706..5815,5920..6239,6332..6447,6619..7038,7084..7164)	Acanthamoeba castellanii str. Neff	14919305
ACA1_044390	CDS	ACA1_044390	NW_004457486.1	7627	8040	R	encoded by transcript ACA1_044390A; uncharacterized protein	complement(7627..8040)	Acanthamoeba castellanii str. Neff	14919306
ACA1_044400	CDS	ACA1_044400	NW_004457486.1	12146	12383	R	encoded by transcript ACA1_044400A; uncharacterized protein	complement(join(12146..12207,12245..12383))	Acanthamoeba castellanii str. Neff	14919307
ACA1_044410	CDS	ACA1_044410	NW_004457486.1	12774	13391	D	encoded by transcript ACA1_044410A; translation initiation inhibitor, putative	12774..13391	Acanthamoeba castellanii str. Neff	14919308
ACA1_044430	CDS	ACA1_044430	NW_004457486.1	19342	19608	R	encoded by transcript ACA1_044430A; uncharacterized protein	complement(join(19342..19506,19582..19608))	Acanthamoeba castellanii str. Neff	14919310
ACA1_044440	CDS	ACA1_044440	NW_004457486.1	20372	20902	D	encoded by transcript ACA1_044440A; uncharacterized protein	join(20372..20444,20471..20583,20735..20902)	Acanthamoeba castellanii str. Neff	14919311
ACA1_044450	CDS	ACA1_044450	NW_004457486.1	21232	21686	D	encoded by transcript ACA1_044450A; uncharacterized protein	join(21232..21420,21518..21576,21593..21686)	Acanthamoeba castellanii str. Neff	14919236
ACA1_044460	CDS	ACA1_044460	NW_004457486.1	21765	23617	R	encoded by transcript ACA1_044460A; uncharacterized protein	complement(join(21765..22473,22594..22693,22787..22841,23116..23185,23239..23346,23457..23617))	Acanthamoeba castellanii str. Neff	14919237
ACA1_044470	CDS	ACA1_044470	NW_004457486.1	24034	25010	R	encoded by transcript ACA1_044470A; uncharacterized protein	complement(join(24034..24686,24710..25010))	Acanthamoeba castellanii str. Neff	14919238
ACA1_044480	CDS	ACA1_044480	NW_004457486.1	25826	29242	R	encoded by transcript ACA1_044480A; Allergen V5/Tpx1 family protein	complement(join(25826..25870,25987..26094,26168..26334,26390..26555,26684..26833,26936..27080,27183..27255,27368..27501,27559..27670,28006..28140,28232..28308,28378..28510,28978..29242))	Acanthamoeba castellanii str. Neff	14919239
ACA1_044690	CDS	ACA1_044690	NW_004457486.1	29623	30605	D	encoded by transcript ACA1_044690A; uncharacterized protein	join(29623..30147,30247..30351,30441..30605)	Acanthamoeba castellanii str. Neff	14919240
ACA1_044700	CDS	ACA1_044700	NW_004457486.1	30854	32307	R	encoded by transcript ACA1_044700A; uncharacterized protein	complement(join(30854..30961,31055..31135,31216..31268,31306..31496,31604..31738,31819..31951,32034..32307))	Acanthamoeba castellanii str. Neff	14919241
ACA1_044710	CDS	ACA1_044710	NW_004457486.1	32909	36230	D	encoded by transcript ACA1_044710A; Serine/threonineprotein kinase	join(32909..32935,33104..33169,33284..33352,33486..33628,33734..33937,34023..34083,34184..34319,34414..34506,34598..34793,34881..35031,35292..36230)	Acanthamoeba castellanii str. Neff	14919242
ACA1_044720	CDS	ACA1_044720	NW_004457486.1	36419	38057	R	encoded by transcript ACA1_044720A; Fbox domain containing protein	complement(join(36419..36577,36674..36793,36895..36951,37162..37293,37455..37539,37614..37692,37787..37892,37962..38057))	Acanthamoeba castellanii str. Neff	14919243
ACA1_044730	CDS	ACA1_044730	NW_004457486.1	40088	41422	D	encoded by transcript ACA1_044730A; SAP domain containing protein	40088..41422	Acanthamoeba castellanii str. Neff	14919244
ACA1_044740	CDS	ACA1_044740	NW_004457486.1	41814	42761	R	encoded by transcript ACA1_044740A; uncharacterized protein	complement(join(41814..42325,42401..42761))	Acanthamoeba castellanii str. Neff	14919245
ACA1_044750	CDS	ACA1_044750	NW_004457486.1	42897	43864	R	encoded by transcript ACA1_044750A; Nacetyltransferase, putative	complement(join(42897..43088,43253..43350,43421..43538,43778..43864))	Acanthamoeba castellanii str. Neff	14919246
ACA1_044760	CDS	ACA1_044760	NW_004457486.1	44512	45180	D	encoded by transcript ACA1_044760A; Fbox domain containing protein	44512..45180	Acanthamoeba castellanii str. Neff	14919247
ACA1_044770	CDS	ACA1_044770	NW_004457486.1	45459	48497	R	encoded by transcript ACA1_044770A; uncharacterized protein	complement(join(45459..45829,45946..45986,46013..46111,46207..46488,46591..46730,46834..47240,47328..47446,47536..47707,47789..47954,48051..48229,48344..48497))	Acanthamoeba castellanii str. Neff	14919248
ACA1_044780	CDS	ACA1_044780	NW_004457486.1	49603	49740	D	encoded by transcript ACA1_044780A; uncharacterized protein	49603..>49740	Acanthamoeba castellanii str. Neff	14919249
ACA1_044890	CDS	ACA1_044890	NW_004457486.1	55961	56260	R	encoded by transcript ACA1_044890A; uncharacterized protein	complement(<55961..56260)	Acanthamoeba castellanii str. Neff	14919250
ACA1_044900	CDS	ACA1_044900	NW_004457486.1	56408	57037	D	encoded by transcript ACA1_044900A; uncharacterized protein	join(56408..56596,56840..57037)	Acanthamoeba castellanii str. Neff	14919251
ACA1_044910	CDS	ACA1_044910	NW_004457486.1	57499	58158	R	encoded by transcript ACA1_044910A; Zinc finger domain containing protein	complement(57499..58158)	Acanthamoeba castellanii str. Neff	14919252
ACA1_044920	CDS	ACA1_044920	NW_004457486.1	59335	60262	R	encoded by transcript ACA1_044920A; uncharacterized protein	complement(join(59335..59391,59489..59578,59776..59846,59934..60019,60147..60262))	Acanthamoeba castellanii str. Neff	14919253
ACA1_044930	CDS	ACA1_044930	NW_004457486.1	60627	65081	D	encoded by transcript ACA1_044930A; helicase domain containing protein	join(60627..60713,61300..62638,62777..63377,63482..65081)	Acanthamoeba castellanii str. Neff	14919254
ACA1_044940	CDS	ACA1_044940	NW_004457486.1	65485	69686	R	encoded by transcript ACA1_044940A; BTB/POZ domain containing protein	complement(join(65485..65873,65985..66405,66559..66806,66903..66966,67064..67215,67361..67472,67697..67749,68037..68186,68563..68632,68821..69032,69150..69263,69342..69470,69566..69686))	Acanthamoeba castellanii str. Neff	14919255
ACA1_045050	CDS	ACA1_045050	NW_004457486.1	69943	70226	D	encoded by transcript ACA1_045050A; uncharacterized protein	join(69943..69982,70063..70226)	Acanthamoeba castellanii str. Neff	14919256
ACA1_045060	CDS	ACA1_045060	NW_004457486.1	70397	72694	D	encoded by transcript ACA1_045060A; MYND finger domain containing protein	join(70397..70647,70747..70883,70974..71058,71174..71269,71342..71408,71554..71827,71902..72081,72226..72381,72474..72694)	Acanthamoeba castellanii str. Neff	14919257
ACA1_045070	CDS	ACA1_045070	NW_004457486.1	72837	73662	R	encoded by transcript ACA1_045070A; uncharacterized protein	complement(join(72837..73165,73267..73403,73502..73662))	Acanthamoeba castellanii str. Neff	14919258
ACA1_045080	CDS	ACA1_045080	NW_004457486.1	73828	75440	D	encoded by transcript ACA1_045080A; thioredoxin, putative	join(73828..73861,73937..74220,74285..74344,74444..75018,75129..75221,75317..75440)	Acanthamoeba castellanii str. Neff	14919259
ACA1_045090	CDS	ACA1_045090	NW_004457486.1	75567	77622	R	encoded by transcript ACA1_045090A; ADPribosylation factor subfamily protein	complement(join(75567..75656,75762..75851,75972..76073,76179..76230,76300..76408,76731..76826,76967..77008,77086..77208,77283..77398,77514..77548,77575..77622))	Acanthamoeba castellanii str. Neff	14919260
ACA1_045200	CDS	ACA1_045200	NW_004457486.1	77817	79418	R	encoded by transcript ACA1_045200A; porphobilinogen deaminase	complement(join(77817..78108,78197..78322,78420..78489,78621..78768,78868..78998,79156..79267,79338..79418))	Acanthamoeba castellanii str. Neff	14919261
ACA1_045210	CDS	ACA1_045210	NW_004457486.1	79502	81703	D	encoded by transcript ACA1_045210A; tRNA nucleotidyltransferase, putative	join(79502..79606,79691..79790,79881..80092,80146..80301,80337..80466,80572..80652,80703..80944,81016..81115,81183..81703)	Acanthamoeba castellanii str. Neff	14919262
ACA1_045220	CDS	ACA1_045220	NW_004457486.1	82232	85509	D	encoded by transcript ACA1_045220A; multisensor hybrid histidine kinase	join(<82232..82339,82450..82537,82657..82790,82953..83058,83110..83161,83252..83395,83501..83689,83818..83919,84030..84114,84212..84307,84428..84606,84673..84833,84911..85039,85146..85300,85315..85509)	Acanthamoeba castellanii str. Neff	14919263
ACA1_045230	CDS	ACA1_045230	NW_004457486.1	85553	90515	D	encoded by transcript ACA1_045230A; multisensor hybrid histidine	join(85553..85780,85940..86045,86139..86247,86324..86534,86629..86761,86843..86975,87069..87174,87243..87318,87394..87519,87618..87744,87994..88100,88223..88331,88407..88559,88656..88686,88778..89181,89266..89353,89479..89751,89838..89898,90049..90515)	Acanthamoeba castellanii str. Neff	14919264
ACA1_045250	CDS	ACA1_045250	NW_004457486.1	93587	94394	D	encoded by transcript ACA1_045250A; uncharacterized protein	join(93587..93674,93745..93796,93896..94017,94101..94242,94325..94394)	Acanthamoeba castellanii str. Neff	14919266
ACA1_045260	CDS	ACA1_045260	NW_004457486.1	94477	101717	R	encoded by transcript ACA1_045260A; Serine/threonine protein kinase	complement(join(94477..94799,94905..95204,95280..95448,95558..95829,95932..96040,96141..96285,96373..96537,96623..96842,96912..97068,97159..97309,97483..97682,97772..97930,98020..98136,98229..98343,98420..98821,98959..99106,99224..99901,99915..100168,100280..100716,100758..101093,101186..101323,101479..101562,101655..101717))	Acanthamoeba castellanii str. Neff	14919267
ACA1_045270	CDS	ACA1_045270	NW_004457486.1	102245	103285	D	encoded by transcript ACA1_045270A; vacuolar protein sortingassociated protein 28, putative	join(102245..102381,102455..102594,102741..102853,102969..103060,103162..103285)	Acanthamoeba castellanii str. Neff	14919268
ACA1_045280	CDS	ACA1_045280	NW_004457486.1	103709	107989	D	encoded by transcript ACA1_045280A; Serine/threonineprotein kinase	join(103709..103735,103901..104039,104163..104259,104380..104497,104645..104736,104848..104908,104996..105049,105125..105189,105302..105411,105506..105679,105752..106829,106910..106973,107000..107570,107673..107989)	Acanthamoeba castellanii str. Neff	14919269
ACA1_045290	CDS	ACA1_045290	NW_004457486.1	108128	109353	R	encoded by transcript ACA1_045290A; clavaldehyde dehydrogenase	complement(join(108128..108190,108278..108468,108649..108714,108773..108889,108983..109130,109222..109353))	Acanthamoeba castellanii str. Neff	14919270
ACA1_045300	CDS	ACA1_045300	NW_004457486.1	109695	110819	R	encoded by transcript ACA1_045300A; nicotinamide n-methyltransferase	complement(join(109695..110031,110126..110240,110332..110449,110573..110688,110753..110819))	Acanthamoeba castellanii str. Neff	14919271
ACA1_045310	CDS	ACA1_045310	NW_004457486.1	111359	112234	R	encoded by transcript ACA1_045310A; Ras GTPase rap1b, putative	complement(join(111359..111721,111819..111891,111977..112005,112118..112234))	Acanthamoeba castellanii str. Neff	14919272
ACA1_045320	CDS	ACA1_045320	NW_004457486.1	114169	116096	D	encoded by transcript ACA1_045320A; uncharacterized protein	join(114169..115473,115552..115649,115731..115861,115936..116096)	Acanthamoeba castellanii str. Neff	14919273
ACA1_045330	CDS	ACA1_045330	NW_004457486.1	116123	117345	D	encoded by transcript ACA1_045330A; uncharacterized protein	join(116123..116202,116291..117060,117122..117345)	Acanthamoeba castellanii str. Neff	14919274
ACA1_045340	CDS	ACA1_045340	NW_004457486.1	117475	118624	D	encoded by transcript ACA1_045340A; 26S proteasome regulatory subunit	join(117475..117816,118010..118624)	Acanthamoeba castellanii str. Neff	14919275
ACA1_045360	CDS	ACA1_045360	NW_004457486.1	122234	123233	R	encoded by transcript ACA1_045360A; uncharacterized protein	complement(join(122234..122356,122437..122555,122634..122791,122862..122946,123021..123122,123182..123233))	Acanthamoeba castellanii str. Neff	14919277
ACA1_045370	CDS	ACA1_045370	NW_004457486.1	124077	125645	D	encoded by transcript ACA1_045370A; uncharacterized protein	join(124077..124357,124476..124636,124753..124953,125035..125145,125236..125373,125467..125645)	Acanthamoeba castellanii str. Neff	14919278
ACA1_045380	CDS	ACA1_045380	NW_004457486.1	126597	128851	D	encoded by transcript ACA1_045380A; uncharacterized protein	join(126597..126660,126967..127090,127173..127282,127486..127719,127739..127930,127944..127998,128014..128118,128134..128851)	Acanthamoeba castellanii str. Neff	14919279
ACA1_045390	CDS	ACA1_045390	NW_004457486.1	129536	131602	D	encoded by transcript ACA1_045390A; mitogenactivated (MAP) kinase	join(129536..129813,129905..130040,130140..130460,130506..130668,130783..130827,130951..131039,131162..131240,131337..131602)	Acanthamoeba castellanii str. Neff	14919280
ACA1_045410	CDS	ACA1_045410	NW_004457486.1	137466	138628	D	encoded by transcript ACA1_045410A; acetyltransferase, putative	join(137466..137480,137501..137601,137759..137868,137962..138064,138144..138345,138410..138628)	Acanthamoeba castellanii str. Neff	14919282
ACA1_045420	CDS	ACA1_045420	NW_004457486.1	138760	140717	D	encoded by transcript ACA1_045420A; carrier superfamily protein	join(138760..138838,138982..139083,139169..139257,139478..139548,139844..139925,140034..140225,140296..140349,140417..140473,140583..140717)	Acanthamoeba castellanii str. Neff	14919283
ACA1_045430	CDS	ACA1_045430	NW_004457486.1	142128	144315	D	encoded by transcript ACA1_045430A; homeobox domain containing protein	join(142128..142229,142406..142748,142793..144315)	Acanthamoeba castellanii str. Neff	14919284
ACA1_045440	CDS	ACA1_045440	NW_004457486.1	144379	146579	R	encoded by transcript ACA1_045440A; ABC2 type transporter, putative	complement(join(144379..144566,144651..144774,144873..145010,145170..145324,145426..145642,145774..145916,146066..146216,146298..146579))	Acanthamoeba castellanii str. Neff	14919285
ACA1_045450	CDS	ACA1_045450	NW_004457486.1	146826	147249	R	encoded by transcript ACA1_045450A; uncharacterized protein	complement(join(146826..146851,147048..147249))	Acanthamoeba castellanii str. Neff	14919286
ACA1_045460	CDS	ACA1_045460	NW_004457486.1	147597	150169	R	encoded by transcript ACA1_045460A; morn motif-containing protein	complement(join(147597..147695,147791..147922,148024..148111,148178..148322,148439..148546,148609..148714,148828..148965,149054..149170,149254..149401,149565..150169))	Acanthamoeba castellanii str. Neff	14919287
ACA1_045470	CDS	ACA1_045470	NW_004457486.1	151604	155699	D	encoded by transcript ACA1_045470A; PH domain containing protein	join(151604..151635,151884..152073,152145..152291,152415..152537,152684..153743,153857..154026,154155..154254,154338..154469,154728..154876,154981..155089,155174..155313,155452..155534,155624..155699)	Acanthamoeba castellanii str. Neff	14919288
ACA1_045480	CDS	ACA1_045480	NW_004457486.1	155940	156275	R	encoded by transcript ACA1_045480A; uncharacterized protein	complement(join(155940..156124,156191..156275))	Acanthamoeba castellanii str. Neff	14919289
ACA1_045590	CDS	ACA1_045590	NW_004457486.1	157252	158165	D	encoded by transcript ACA1_045590A; Arf GTPase activating protein	join(157252..157317,157433..157541,157627..157766,157912..157994,158090..158165)	Acanthamoeba castellanii str. Neff	14919290
ACA1_045600	CDS	ACA1_045600	NW_004457486.1	158456	161218	R	encoded by transcript ACA1_045600A; uncharacterized protein	complement(join(158456..158640,158746..158845,158935..159084,159212..159291,159419..159637,159751..159888,160043..160161,160289..160364,160452..160578,160638..160792,160911..161052,161159..161218))	Acanthamoeba castellanii str. Neff	14919291
ACA1_045610	CDS	ACA1_045610	NW_004457486.1	162175	162986	R	encoded by transcript ACA1_045610A; uncharacterized protein	complement(join(162175..162234,162346..162500,162678..162819,162927..162986))	Acanthamoeba castellanii str. Neff	14919292
ACA1_045620	CDS	ACA1_045620	NW_004457486.1	164200	165147	D	encoded by transcript ACA1_045620A; uncharacterized protein	164200..165147	Acanthamoeba castellanii str. Neff	14919293
ACA1_045630	CDS	ACA1_045630	NW_004457486.1	165272	166838	R	encoded by transcript ACA1_045630A; NADHdependent histone deacetylase	complement(join(165272..165426,165546..165616,165713..165810,165881..166071,166200..166296,166550..166776,166832..166838))	Acanthamoeba castellanii str. Neff	14919294
ACA1_045640	CDS	ACA1_045640	NW_004457486.1	167097	168083	D	encoded by transcript ACA1_045640A; uncharacterized protein	join(167097..167192,167384..167458,167531..167658,167777..168083)	Acanthamoeba castellanii str. Neff	14919295
ACA1_045650	CDS	ACA1_045650	NW_004457486.1	168268	168748	R	encoded by transcript ACA1_045650A; uncharacterized protein	complement(join(168268..168404,168493..168748))	Acanthamoeba castellanii str. Neff	14919296
ACA1_045660	CDS	ACA1_045660	NW_004457486.1	169055	170041	R	encoded by transcript ACA1_045660A; uncharacterized protein	complement(join(169055..169288,169381..169910,170026..170041))	Acanthamoeba castellanii str. Neff	14919297
ACA1_045670	CDS	ACA1_045670	NW_004457486.1	170501	171379	R	encoded by transcript ACA1_045670A; dual specificity phosphatase	complement(join(170501..170743,170950..171060,171151..171239,171310..171379))	Acanthamoeba castellanii str. Neff	14919298
ACA1_045680	CDS	ACA1_045680	NW_004457486.1	172627	176029	R	encoded by transcript ACA1_045680A; uncharacterized protein	complement(join(<172627..172892,173034..173231,173319..173467,173569..174072,174169..174319,174408..174558,174627..176029))	Acanthamoeba castellanii str. Neff	14919299
ACA1_045690	CDS	ACA1_045690	NW_004457486.1	177156	178096	D	encoded by transcript ACA1_045690A; uncharacterized protein	join(177156..177950,177962..178096)	Acanthamoeba castellanii str. Neff	14919300
ACA1_045700	CDS	ACA1_045700	NW_004457486.1	179075	180670	D	encoded by transcript ACA1_045700A; alcohol dehydrogenase GroESlike domain containing protein	join(179075..179309,179408..179523,179630..179710,179802..179867,179954..180304,180389..180490,180503..180670)	Acanthamoeba castellanii str. Neff	14919301
ACA1_045710	CDS	ACA1_045710	NW_004457486.1	180785	182515	R	encoded by transcript ACA1_045710A; PH domain containing protein	complement(join(180785..180919,181036..181176,181294..181364,181446..181532,181646..181747,181839..181997,182085..182214,182345..182515))	Acanthamoeba castellanii str. Neff	14919302
ACA1_045720	CDS	ACA1_045720	NW_004457486.1	182978	188103	D	encoded by transcript ACA1_045720A; xanthine dehydrogenase	join(182978..183383,183524..183728,183866..184009,184083..184163,184307..184313,184352..184551,184595..184619,184734..185066,185164..185406,185481..185589,185681..185965,186037..186173,186264..186323,186433..186612,186712..186894,187003..187108,187205..187315,187391..187684,187770..187846,187957..188103)	Acanthamoeba castellanii str. Neff	14919303
ACA1_314960	CDS	ACA1_314960	NW_004457484.1	115	1285	R	encoded by transcript ACA1_314960A; Fbox domain containing protein	complement(join(<115..277,377..470,550..661,724..827,945..1054,1134..1285))	Acanthamoeba castellanii str. Neff	14919235
ACA1_314970	CDS	ACA1_314970	NW_004457484.1	2490	5227	D	encoded by transcript ACA1_314970A; ubiquitin carboxylterminal hydrolase 9, putative	join(2490..2658,2763..2943,3024..3096,3202..3368,3457..3566,3657..4120,4256..4355,4562..4665,4767..4907,4997..5061,5182..5227)	Acanthamoeba castellanii str. Neff	14919224
ACA1_314980	CDS	ACA1_314980	NW_004457484.1	5502	6750	R	encoded by transcript ACA1_314980A; Ubox domain containing protein	complement(join(5502..5704,5838..6214,6288..6403,6616..6750))	Acanthamoeba castellanii str. Neff	14919234
ACA1_314990	CDS	ACA1_314990	NW_004457484.1	6914	8547	R	encoded by transcript ACA1_314990A; zincbinding dehydrogenase family oxidoreductase	complement(join(6914..7305,7413..7547,7642..7734,7886..8050,8154..8328,8425..8547))	Acanthamoeba castellanii str. Neff	14919225
ACA1_315000	CDS	ACA1_315000	NW_004457484.1	8755	11048	R	encoded by transcript ACA1_315000A; WD domain, G-beta repeat-containing protein	complement(join(8755..8783,8803..8879,9012..9077,9153..9340,9443..9514,9609..9718,9797..9891,9962..10025,10213..10271,10360..10422,10561..10666,10742..10862,10935..11048))	Acanthamoeba castellanii str. Neff	14919226
ACA1_315010	CDS	ACA1_315010	NW_004457484.1	12812	14288	D	encoded by transcript ACA1_315010A; ankyrin, putative	join(12812..13030,13116..13166,13243..13319,13403..13520,13605..13765,13831..13924,14020..14152,14233..14288)	Acanthamoeba castellanii str. Neff	14919227
ACA1_315020	CDS	ACA1_315020	NW_004457484.1	14376	18980	D	encoded by transcript ACA1_315020A; SPRY domain containing protein	join(14376..14413,14490..14590,14683..14766,14860..15031,15123..15174,15283..15349,15408..15629,15721..15870,16006..16108,16233..16314,16413..16533,16655..16739,16861..17057,17164..17237,17343..17421,17529..17626,17749..17846,17977..18039,18144..18751,18871..18980)	Acanthamoeba castellanii str. Neff	14919228
ACA1_315030	CDS	ACA1_315030	NW_004457484.1	19234	19605	D	encoded by transcript ACA1_315030A; uncharacterized protein	join(19234..19344,19405..19605)	Acanthamoeba castellanii str. Neff	14919229
ACA1_315040	CDS	ACA1_315040	NW_004457484.1	20242	22888	D	encoded by transcript ACA1_315040A; Glycosyltransferase	join(20242..20248,20564..20848,21058..21635,21668..22888)	Acanthamoeba castellanii str. Neff	14919230
ACA1_315050	CDS	ACA1_315050	NW_004457484.1	23063	24847	R	encoded by transcript ACA1_315050A; chain a, 4ank: a designed ankyrin repeat protein	complement(join(23063..23439,23531..23635,23739..23787,23931..23973,24110..24177,24286..24336,24429..24482,24591..24653,24734..24847))	Acanthamoeba castellanii str. Neff	14919231
ACA1_315060	CDS	ACA1_315060	NW_004457484.1	25139	26988	R	encoded by transcript ACA1_315060A; 26S proteasome AAAATPase subunit RPT4a, putative	complement(join(25139..25531,25622..25740,25838..25903,25984..26134,26238..26351,26441..26562,26661..26780,26898..26988))	Acanthamoeba castellanii str. Neff	14919232
ACA1_315070	CDS	ACA1_315070	NW_004457484.1	27377	28631	D	encoded by transcript ACA1_315070A; Isobutyryl-CoA dehydrogenase, putative	join(27377..27494,27585..27649,27739..27826,27898..27965,28075..28203,28310..28481,28558..>28631)	Acanthamoeba castellanii str. Neff	14919233
ACA1_300350	CDS	ACA1_300350	NW_004457482.1	5	388	D	encoded by transcript ACA1_300350A; uncharacterized protein	5..388	Acanthamoeba castellanii str. Neff	14919216
ACA1_300360	CDS	ACA1_300360	NW_004457482.1	1095	3102	D	encoded by transcript ACA1_300360A; uncharacterized protein	join(1095..1244,1594..1790,1898..1989,2139..2239,2810..2954,3044..3102)	Acanthamoeba castellanii str. Neff	14919223
ACA1_300470	CDS	ACA1_300470	NW_004457482.1	3205	4836	R	encoded by transcript ACA1_300470A; metallophosphoesterase	complement(join(3205..3315,3419..3507,3578..3692,3767..3849,3933..4082,4279..4395,4504..4559,4694..4836))	Acanthamoeba castellanii str. Neff	14919219
ACA1_300490	CDS	ACA1_300490	NW_004457482.1	6947	8107	R	encoded by transcript ACA1_300490A; uncharacterized protein	complement(join(6947..7484,7602..7673,7759..7839,7965..8107))	Acanthamoeba castellanii str. Neff	14919222
ACA1_300500	CDS	ACA1_300500	NW_004457482.1	10175	11924	D	encoded by transcript ACA1_300500A; uncharacterized protein	join(10175..10207,10318..10405,10516..10700,10790..10877,10996..11073,11157..11237,11381..11388,11405..11515,11631..11924)	Acanthamoeba castellanii str. Neff	14919221
ACA1_300510	CDS	ACA1_300510	NW_004457482.1	12084	13637	R	encoded by transcript ACA1_300510A; carrier superfamily protein	complement(join(12084..12123,12226..12286,12418..12571,12662..12800,12898..12980,13091..13236,13385..13463,13623..13637))	Acanthamoeba castellanii str. Neff	14919217
ACA1_300520	CDS	ACA1_300520	NW_004457482.1	13781	20544	D	encoded by transcript ACA1_300520A; uncharacterized protein	join(13781..13858,13938..13991,14092..14133,14208..14260,14353..14452,14685..15126,15270..15430,15554..15584,15704..15778,15867..15958,16070..16135,16237..16338,19216..19353,19499..19656,19743..19917,19996..20116,20198..20286,20380..>20544)	Acanthamoeba castellanii str. Neff	14919218
ACA1_011380	CDS	ACA1_011380	NW_004457480.1	103	932	D	encoded by transcript ACA1_011380A; uncharacterized protein	join(<103..213,350..401,487..603,733..932)	Acanthamoeba castellanii str. Neff	14919212
ACA1_011490	CDS	ACA1_011490	NW_004457480.1	6874	8930	D	encoded by transcript ACA1_011490A; RhoGEF domain containing protein	join(6874..7027,7132..7211,7314..7396,7466..7562,7647..7773,7874..7982,8061..8135,8212..8275,8336..8414,8530..8807,8907..>8930)	Acanthamoeba castellanii str. Neff	14919215
ACA1_011600	CDS	ACA1_011600	NW_004457480.1	10684	11022	R	encoded by transcript ACA1_011600A; uncharacterized protein	complement(join(10684..10805,10878..11022))	Acanthamoeba castellanii str. Neff	14919214
ACA1_011810	CDS	ACA1_011810	NW_004457480.1	14817	15751	R	encoded by transcript ACA1_011810A; AT hook motif domain containing protein	complement(join(14817..15244,15378..15508,15687..15751))	Acanthamoeba castellanii str. Neff	14919213
ACA1_136730	CDS	ACA1_136730	NW_004457477.1	489	1226	R	encoded by transcript ACA1_136730A; Copia protein (Gagint-pol protein), putative	complement(join(489..1060,1139..1226))	Acanthamoeba castellanii str. Neff	14919196
ACA1_136740	CDS	ACA1_136740	NW_004457477.1	1317	1976	R	encoded by transcript ACA1_136740A; GagPol, putative	complement(1317..1976)	Acanthamoeba castellanii str. Neff	14919158
ACA1_136750	CDS	ACA1_136750	NW_004457477.1	3133	3525	R	encoded by transcript ACA1_136750A; uncharacterized protein	complement(join(3133..3184,3311..3525))	Acanthamoeba castellanii str. Neff	14919159
ACA1_136760	CDS	ACA1_136760	NW_004457477.1	3901	4803	R	encoded by transcript ACA1_136760A; uncharacterized protein	complement(join(3901..4422,4497..4677,4700..4803))	Acanthamoeba castellanii str. Neff	14919197
ACA1_136770	CDS	ACA1_136770	NW_004457477.1	5569	6405	D	encoded by transcript ACA1_136770A; uncharacterized protein	join(5569..5790,5875..6405)	Acanthamoeba castellanii str. Neff	14919150
ACA1_136780	CDS	ACA1_136780	NW_004457477.1	6624	8471	D	encoded by transcript ACA1_136780A; uncharacterized protein	join(6624..6818,6912..7077,7153..8148,8279..8360,8441..8471)	Acanthamoeba castellanii str. Neff	14919151
ACA1_136790	CDS	ACA1_136790	NW_004457477.1	9371	11908	D	encoded by transcript ACA1_136790A; Tubulin/FtsZ family, GTPase domain containing protein	join(9371..9719,9828..9992,10083..10188,10293..10450,10527..10649,10738..10805,10902..10967,11049..11701,11791..11908)	Acanthamoeba castellanii str. Neff	14919152
ACA1_136800	CDS	ACA1_136800	NW_004457477.1	13280	14689	R	encoded by transcript ACA1_136800A; uncharacterized protein	complement(13280..14689)	Acanthamoeba castellanii str. Neff	14919153
ACA1_136810	CDS	ACA1_136810	NW_004457477.1	14871	16138	R	encoded by transcript ACA1_136810A; uncharacterized protein	complement(join(14871..14891,14942..14994,15121..15570,15667..16138))	Acanthamoeba castellanii str. Neff	14919154
ACA1_136820	CDS	ACA1_136820	NW_004457477.1	17334	17971	R	encoded by transcript ACA1_136820A; reverse transcriptase (rna-dependent dna polymerase) protein	complement(join(17334..17592,17616..17971))	Acanthamoeba castellanii str. Neff	14919155
ACA1_136830	CDS	ACA1_136830	NW_004457477.1	18133	18462	R	encoded by transcript ACA1_136830A; uncharacterized protein	complement(18133..18462)	Acanthamoeba castellanii str. Neff	14919156
ACA1_136840	CDS	ACA1_136840	NW_004457477.1	18998	19341	R	encoded by transcript ACA1_136840A; uncharacterized protein	complement(join(18998..19159,19255..19341))	Acanthamoeba castellanii str. Neff	14919157
ACA1_136850	CDS	ACA1_136850	NW_004457477.1	20854	21243	R	encoded by transcript ACA1_136850A; uncharacterized protein	complement(20854..21243)	Acanthamoeba castellanii str. Neff	14919139
ACA1_137060	CDS	ACA1_137060	NW_004457477.1	24323	27697	D	encoded by transcript ACA1_137060A; protein kinase domain containing protein	join(24323..25250,25403..25869,26825..27697)	Acanthamoeba castellanii str. Neff	14919140
ACA1_137270	CDS	ACA1_137270	NW_004457477.1	28634	29496	R	encoded by transcript ACA1_137270A; uncharacterized protein	complement(join(28634..28883,28962..29286,29370..29496))	Acanthamoeba castellanii str. Neff	14919141
ACA1_137280	CDS	ACA1_137280	NW_004457477.1	29798	30143	R	encoded by transcript ACA1_137280A; uncharacterized protein	complement(join(29798..29916,29927..30091,30116..30143))	Acanthamoeba castellanii str. Neff	14919142
ACA1_137290	CDS	ACA1_137290	NW_004457477.1	30694	31414	D	encoded by transcript ACA1_137290A; uncharacterized protein	join(30694..30965,31083..31143,31174..31278,31358..31414)	Acanthamoeba castellanii str. Neff	14919143
ACA1_137300	CDS	ACA1_137300	NW_004457477.1	31731	33821	D	encoded by transcript ACA1_137300A; uncharacterized protein	join(31731..31810,31825..32135,32189..32291,32407..32482,32671..32866,33455..33534,33786..33821)	Acanthamoeba castellanii str. Neff	14919144
ACA1_137310	CDS	ACA1_137310	NW_004457477.1	34295	39382	R	encoded by transcript ACA1_137310A; SPX domain containing protein	complement(join(34295..34387,34593..34706,34783..34905,35040..35118,35207..35294,35607..35700,35769..35904,35944..35999,36082..36222,36301..36527,36650..36796,36912..36975,37048..37092,37193..37294,37411..37495,37717..38702,38794..38969,39226..39382))	Acanthamoeba castellanii str. Neff	14919145
ACA1_137420	CDS	ACA1_137420	NW_004457477.1	39723	40836	R	encoded by transcript ACA1_137420A; LYAR-type C2HC zinc finger protein	complement(join(39723..40236,40430..40576,40678..40722,40811..40836))	Acanthamoeba castellanii str. Neff	14919146
ACA1_137430	CDS	ACA1_137430	NW_004457477.1	41055	44972	D	encoded by transcript ACA1_137430A; penicillin acylase	join(41055..41262,41399..41576,41623..41701,41785..41834,42131..42243,42327..42421,42506..42581,42652..42693,42780..42919,42994..43151,43221..43363,43441..43534,43625..43679,43781..44605,44684..44758,44862..44972)	Acanthamoeba castellanii str. Neff	14919147
ACA1_137440	CDS	ACA1_137440	NW_004457477.1	45144	45806	D	encoded by transcript ACA1_137440A; uncharacterized protein	join(45144..45352,45438..45540,45628..45771,45798..45806)	Acanthamoeba castellanii str. Neff	14919148
ACA1_137450	CDS	ACA1_137450	NW_004457477.1	46006	47286	D	encoded by transcript ACA1_137450A; uncharacterized protein	join(46006..46560,46728..47090,47212..47286)	Acanthamoeba castellanii str. Neff	14919149
ACA1_137460	CDS	ACA1_137460	NW_004457477.1	48551	51163	D	encoded by transcript ACA1_137460A; uncharacterized protein	join(48551..48717,48753..48839,48911..49021,49169..49247,49322..49651,49688..49968,50038..51163)	Acanthamoeba castellanii str. Neff	14919160
ACA1_137470	CDS	ACA1_137470	NW_004457477.1	51745	53624	R	encoded by transcript ACA1_137470A; uncharacterized protein	complement(join(51745..51783,51995..52201,52281..52395,52525..52666,52765..52857,53008..53086,53253..53398,53498..53624))	Acanthamoeba castellanii str. Neff	14919161
ACA1_137580	CDS	ACA1_137580	NW_004457477.1	55812	58741	R	encoded by transcript ACA1_137580A; uncharacterized protein	complement(join(55812..56076,56201..56334,56460..57173,57268..57908,58131..58215,58296..58427,58534..58673,58708..58741))	Acanthamoeba castellanii str. Neff	14919162
ACA1_137590	CDS	ACA1_137590	NW_004457477.1	59261	59556	D	encoded by transcript ACA1_137590A; uncharacterized protein	join(59261..59282,59297..59556)	Acanthamoeba castellanii str. Neff	14919163
ACA1_137600	CDS	ACA1_137600	NW_004457477.1	59796	60373	D	encoded by transcript ACA1_137600A; copialike retrotransposable element, putative	join(<59796..60148,60211..60373)	Acanthamoeba castellanii str. Neff	14919164
ACA1_137620	CDS	ACA1_137620	NW_004457477.1	61778	62241	D	encoded by transcript ACA1_137620A; uncharacterized protein	join(61778..61906,61963..62241)	Acanthamoeba castellanii str. Neff	14919166
ACA1_137630	CDS	ACA1_137630	NW_004457477.1	62329	62622	D	encoded by transcript ACA1_137630A; NHL repeat-containing protein	<62329..62622	Acanthamoeba castellanii str. Neff	14919167
ACA1_137640	CDS	ACA1_137640	NW_004457477.1	62768	63058	R	encoded by transcript ACA1_137640A; uncharacterized protein	complement(62768..63058)	Acanthamoeba castellanii str. Neff	14919168
ACA1_137650	CDS	ACA1_137650	NW_004457477.1	63430	65539	R	encoded by transcript ACA1_137650A; leucine rich repeat domain containing protein	complement(join(63430..63716,63791..63875,63953..64084,64167..64281,64368..64512,64598..64784,64872..65020,65126..65305,65365..65539))	Acanthamoeba castellanii str. Neff	14919169
ACA1_137760	CDS	ACA1_137760	NW_004457477.1	67705	68686	D	encoded by transcript ACA1_137760A; Mesenchymal stem cell protein DSCD75 family protein	join(67705..67724,67795..67855,67926..68060,68175..68252,68384..68464,68579..68686)	Acanthamoeba castellanii str. Neff	14919170
ACA1_137770	CDS	ACA1_137770	NW_004457477.1	68857	70385	R	encoded by transcript ACA1_137770A; uncharacterized protein	complement(join(68857..69131,69236..69373,69460..69570,69675..69965,70052..70385))	Acanthamoeba castellanii str. Neff	14919171
ACA1_137780	CDS	ACA1_137780	NW_004457477.1	70507	71161	R	encoded by transcript ACA1_137780A; uncharacterized protein	complement(join(70507..70618,70701..71161))	Acanthamoeba castellanii str. Neff	14919172
ACA1_137790	CDS	ACA1_137790	NW_004457477.1	72156	72868	R	encoded by transcript ACA1_137790A; IBR domain containing protein	complement(join(72156..72181,72302..72417,72484..72675,72756..72868))	Acanthamoeba castellanii str. Neff	14919173
ACA1_137800	CDS	ACA1_137800	NW_004457477.1	73061	73756	R	encoded by transcript ACA1_137800A; uncharacterized protein	complement(join(73061..73288,73384..73593,73685..73756))	Acanthamoeba castellanii str. Neff	14919174
ACA1_137810	CDS	ACA1_137810	NW_004457477.1	73893	76491	R	encoded by transcript ACA1_137810A; pentatricopeptide repeat domain containing protein	complement(join(73893..74103,74201..74334,74461..74515,74623..75501,75630..75859,75970..76135,76256..76340,76401..76491))	Acanthamoeba castellanii str. Neff	14919175
ACA1_137820	CDS	ACA1_137820	NW_004457477.1	76877	77724	D	encoded by transcript ACA1_137820A; elongation factor Tu GTP binding domain containing protein	join(76877..77127,77304..77415,77431..77724)	Acanthamoeba castellanii str. Neff	14919176
ACA1_137930	CDS	ACA1_137930	NW_004457477.1	78432	78704	R	encoded by transcript ACA1_137930A; uncharacterized protein	complement(78432..>78704)	Acanthamoeba castellanii str. Neff	14919198
ACA1_138040	CDS	ACA1_138040	NW_004457477.1	79006	79989	D	encoded by transcript ACA1_138040A; elongation factor 1alpha, somatic form, putative	<79006..79989	Acanthamoeba castellanii str. Neff	14919199
ACA1_138050	CDS	ACA1_138050	NW_004457477.1	80373	82876	D	encoded by transcript ACA1_138050A; Tyrosyl-DNA phosphodiesterase	join(80373..80435,80446..80535,80622..80738,80807..80980,81077..81202,81312..81401,81494..81592,81666..82298,82406..82483,82637..82876)	Acanthamoeba castellanii str. Neff	14919200
ACA1_138060	CDS	ACA1_138060	NW_004457477.1	83282	84418	R	encoded by transcript ACA1_138060A; uncharacterized protein	complement(join(83282..83603,83726..83840,83980..84153,84228..84282,84359..84418))	Acanthamoeba castellanii str. Neff	14919201
ACA1_138070	CDS	ACA1_138070	NW_004457477.1	85084	91470	R	encoded by transcript ACA1_138070A; protein kinase domain containing protein	complement(join(85084..85276,85350..85430,85515..85872,85956..86167,86237..86699,86719..86790,86930..87075,87156..87372,87523..87797,87879..88146,88296..88427,88505..88586,88670..88840,88985..89140,89243..89316,89388..89607,89684..90146,90219..90329,90431..90977,91068..>91470))	Acanthamoeba castellanii str. Neff	14919202
ACA1_138180	CDS	ACA1_138180	NW_004457477.1	92090	96388	R	encoded by transcript ACA1_138180A; uncharacterized protein	complement(join(92090..92164,92246..92377,92484..92609,92656..92744,93249..93378,93529..93639,93826..93943,94012..94114,94206..94347,94434..94594,94690..94813,94885..95021,95225..95323,95344..95559,95708..95779,95866..96045,96145..96198,96277..96388))	Acanthamoeba castellanii str. Neff	14919203
ACA1_138290	CDS	ACA1_138290	NW_004457477.1	96489	96896	D	encoded by transcript ACA1_138290A; uncharacterized protein	join(96489..96589,96695..96896)	Acanthamoeba castellanii str. Neff	14919204
ACA1_138300	CDS	ACA1_138300	NW_004457477.1	96948	98446	R	encoded by transcript ACA1_138300A; AIG2 family protein	complement(join(96948..97010,97114..97405,97474..97673,97755..97807,97911..98040,98195..98295,98398..98446))	Acanthamoeba castellanii str. Neff	14919205
ACA1_138310	CDS	ACA1_138310	NW_004457477.1	98834	104000	D	encoded by transcript ACA1_138310A; Ras subfamily protein	join(98834..99739,99864..99951,100139..100239,100701..100738,101016..101141,101351..101492,101604..102029,102126..102317,102427..102588,102698..102835,102937..103096,103218..103790,103885..104000)	Acanthamoeba castellanii str. Neff	14919206
ACA1_138320	CDS	ACA1_138320	NW_004457477.1	104348	106642	D	encoded by transcript ACA1_138320A; brix domain containing protein	join(104348..104374,104582..104746,104866..105017,105166..105244,105360..105452,105555..105739,105826..106642)	Acanthamoeba castellanii str. Neff	14919207
ACA1_138330	CDS	ACA1_138330	NW_004457477.1	106792	109353	R	encoded by transcript ACA1_138330A; uncharacterized protein	complement(join(106792..107756,107863..108047,108157..108272,108417..108559,108642..108756,109013..109143,109302..109353))	Acanthamoeba castellanii str. Neff	14919208
ACA1_138340	CDS	ACA1_138340	NW_004457477.1	110034	113308	D	encoded by transcript ACA1_138340A; PH domain containing protein	join(110034..110072,110191..110287,110347..110384,110490..110591,110670..110811,110961..112107,112256..112542,112638..112708,112784..112900,112981..113061,113171..113308)	Acanthamoeba castellanii str. Neff	14919209
ACA1_138350	CDS	ACA1_138350	NW_004457477.1	113863	116301	D	encoded by transcript ACA1_138350A; uncharacterized protein	join(113863..114060,114180..114371,114461..114595,114727..114876,114998..115109,115214..115351,115469..115659,115719..115848,115929..116055,116145..116301)	Acanthamoeba castellanii str. Neff	14919210
ACA1_138360	CDS	ACA1_138360	NW_004457477.1	116517	117567	R	encoded by transcript ACA1_138360A; Ubiquitinconjugating enzyme subfamily protein	complement(join(116517..116719,116836..116911,117001..117099,117158..117226,117310..117362,117468..117567))	Acanthamoeba castellanii str. Neff	14919211
ACA1_138370	CDS	ACA1_138370	NW_004457477.1	117939	120428	R	encoded by transcript ACA1_138370A; Ras subfamily protein	complement(join(117939..118044,118122..118261,118327..118773,118849..118885,118945..119000,119075..119264,119403..119515,119713..119805,119835..120007,120116..120264,120388..120428))	Acanthamoeba castellanii str. Neff	14919177
ACA1_138380	CDS	ACA1_138380	NW_004457477.1	120789	122327	D	encoded by transcript ACA1_138380A; cathepsin Llike cysteine protease	join(120789..121230,121364..121481,121601..121805,121976..122110,122190..122327)	Acanthamoeba castellanii str. Neff	14919178
ACA1_138390	CDS	ACA1_138390	NW_004457477.1	123247	125481	R	encoded by transcript ACA1_138390A; uncharacterized protein	complement(join(123247..123369,123492..123691,123807..124785,124800..125001,125125..125237,125311..125481))	Acanthamoeba castellanii str. Neff	14919179
ACA1_138400	CDS	ACA1_138400	NW_004457477.1	126871	129093	R	encoded by transcript ACA1_138400A; uncharacterized protein	complement(join(126871..126990,127014..127794,127862..127901,128087..128194,128369..128486,128578..128657,128709..128817,128962..129093))	Acanthamoeba castellanii str. Neff	14919180
ACA1_138410	CDS	ACA1_138410	NW_004457477.1	130656	132123	R	encoded by transcript ACA1_138410A; uncharacterized protein	complement(join(130656..130783,130890..131213,131313..131473,131600..131677,131846..132123))	Acanthamoeba castellanii str. Neff	14919181
ACA1_138420	CDS	ACA1_138420	NW_004457477.1	132303	135339	R	encoded by transcript ACA1_138420A; uncharacterized protein	complement(join(132303..132402,132498..132642,132866..133038,133203..133338,133435..133741,133826..133941,134042..134138,134259..134626,134737..134806,134896..135085,135317..135339))	Acanthamoeba castellanii str. Neff	14919182
ACA1_138430	CDS	ACA1_138430	NW_004457477.1	135459	138939	D	encoded by transcript ACA1_138430A; bromodomain domain containing protein	join(135459..135683,135936..136021,136194..136420,136559..138294,138409..138543,138664..138760,138803..138939)	Acanthamoeba castellanii str. Neff	14919183
ACA1_138440	CDS	ACA1_138440	NW_004457477.1	139879	140137	R	encoded by transcript ACA1_138440A; uncharacterized protein	complement(join(139879..140028,140090..140137))	Acanthamoeba castellanii str. Neff	14919184
ACA1_138450	CDS	ACA1_138450	NW_004457477.1	140834	142302	R	encoded by transcript ACA1_138450A; S1/P1 Nuclease	complement(join(140834..140949,141055..141218,141308..141408,141513..141628,141710..141830,141931..142002,142150..142302))	Acanthamoeba castellanii str. Neff	14919185
ACA1_138460	CDS	ACA1_138460	NW_004457477.1	142818	145911	R	encoded by transcript ACA1_138460A; NADdependent DNA ligase OB-fold domain containing protein	complement(join(142818..142998,143069..143224,143296..143432,143510..144025,144104..144534,144657..144733,144827..144977,145071..145132,145205..145308,145396..145463,145546..145609,145681..145911))	Acanthamoeba castellanii str. Neff	14919186
ACA1_138470	CDS	ACA1_138470	NW_004457477.1	146323	147564	D	encoded by transcript ACA1_138470A; ribosomal protein L12e, putative	join(146323..146356,146424..146497,146584..146674,146762..146878,146961..147008,147108..147254,147323..147564)	Acanthamoeba castellanii str. Neff	14919187
ACA1_138480	CDS	ACA1_138480	NW_004457477.1	148338	149033	R	encoded by transcript ACA1_138480A; uncharacterized protein	complement(join(148338..148666,148751..148817,148890..149033))	Acanthamoeba castellanii str. Neff	14919188
ACA1_138490	CDS	ACA1_138490	NW_004457477.1	149388	152703	R	encoded by transcript ACA1_138490A; Protein-tyrosine phosphatase domain containing protein	complement(join(149388..149453,149568..149669,149746..149862,149978..150033,150177..150357,150446..150574,150680..150754,150947..151024,151105..151175,151247..151355,151659..151741,151806..152703))	Acanthamoeba castellanii str. Neff	14919189
ACA1_138500	CDS	ACA1_138500	NW_004457477.1	153453	154938	R	encoded by transcript ACA1_138500A; Ubiquitinconjugating enzyme subfamily protein	complement(join(153453..153574,153799..153921,154017..154146,154262..154329,154456..154581,154674..154800,154915..154938))	Acanthamoeba castellanii str. Neff	14919190
ACA1_138510	CDS	ACA1_138510	NW_004457477.1	155475	158788	D	encoded by transcript ACA1_138510A; legume lectins beta domain containing protein	join(155475..155595,155699..155900,155971..156166,156240..156407,156495..156621,156697..156824,156897..156958,157061..157190,157265..157351,157424..157520,157578..157640,157781..157942,158014..158114,158202..158266,158398..158788)	Acanthamoeba castellanii str. Neff	14919191
ACA1_138520	CDS	ACA1_138520	NW_004457477.1	159376	161522	D	encoded by transcript ACA1_138520A; putative phospholipase blike 2, putative	join(159376..159708,159798..159915,160019..160269,160391..160596,160692..160772,160908..161038,161137..161261,161361..161522)	Acanthamoeba castellanii str. Neff	14919192
ACA1_138530	CDS	ACA1_138530	NW_004457477.1	161652	162518	R	encoded by transcript ACA1_138530A; peptidase, S54 (rhomboid) subfamily protein	complement(join(161652..161962,162095..>162518))	Acanthamoeba castellanii str. Neff	14919193
ACA1_138540	CDS	ACA1_138540	NW_004457477.1	162615	163765	R	encoded by transcript ACA1_138540A; uncharacterized protein	complement(join(162615..163357,163447..>163765))	Acanthamoeba castellanii str. Neff	14919194
ACA1_138650	CDS	ACA1_138650	NW_004457477.1	169276	169884	R	encoded by transcript ACA1_138650A; FYVE zinc finger domain containing protein	complement(join(169276..169473,169624..169736,169815..169884))	Acanthamoeba castellanii str. Neff	14919195
ACA1_321540	CDS	ACA1_321540	NW_004457475.1	63	284	D	encoded by transcript ACA1_321540A; uncharacterized protein	<63..284	Acanthamoeba castellanii str. Neff	14919130
ACA1_321550	CDS	ACA1_321550	NW_004457475.1	751	2506	R	encoded by transcript ACA1_321550A; Fbox domain containing protein	complement(join(751..950,1152..1297,1374..1472,1626..1954,2050..2071,2082..2370,2467..2506))	Acanthamoeba castellanii str. Neff	14919136
ACA1_321560	CDS	ACA1_321560	NW_004457475.1	2780	4875	R	encoded by transcript ACA1_321560A; uncharacterized protein	complement(join(2780..2979,3084..3235,3354..3476,3621..3723,3818..3895,4012..4143,4242..4331,4434..4875))	Acanthamoeba castellanii str. Neff	14919137
ACA1_321570	CDS	ACA1_321570	NW_004457475.1	5069	7157	R	encoded by transcript ACA1_321570A; phytoene synthase family protein, putative	complement(join(5069..5128,5236..5310,5390..5452,5559..5633,5755..5846,5938..6082,6165..6263,6349..6408,6492..6537,6607..6681,6760..6861,7012..7157))	Acanthamoeba castellanii str. Neff	14919138
ACA1_321580	CDS	ACA1_321580	NW_004457475.1	7499	9936	D	encoded by transcript ACA1_321580A; protein serine/threonine kinase	join(7499..7609,7684..7757,7847..7939,8032..8104,8188..8271,8321..8449,8518..8636,8691..8864,8946..9045,9127..9365,9461..9578,9662..9727,9823..9936)	Acanthamoeba castellanii str. Neff	14919131
ACA1_321590	CDS	ACA1_321590	NW_004457475.1	11149	13515	D	encoded by transcript ACA1_321590A; IQ calmodulin-binding motif domain containing protein	join(11149..11226,11303..11365,11462..11793,11875..11936,11982..12219,12301..12680,12708..12902,12985..13071,13173..13202,13221..13306,13378..13515)	Acanthamoeba castellanii str. Neff	14919132
ACA1_321600	CDS	ACA1_321600	NW_004457475.1	13965	21104	D	encoded by transcript ACA1_321600A; Poly(ADPribose) polymerase catalytic domain containing protein	join(13965..14078,14253..14400,14622..14775,14859..15539,15768..16066,16146..16301,16390..17114,17221..17535,17575..18197,18308..18547,18639..19006,19082..19202,19330..19473,19492..19739,19888..19994,20058..20724,20807..21022,21097..21104)	Acanthamoeba castellanii str. Neff	14919133
ACA1_321610	CDS	ACA1_321610	NW_004457475.1	21512	24338	D	encoded by transcript ACA1_321610A; ABC2 type transporter superfamily protein	join(21512..21863,21981..22123,22200..22458,22545..22784,22885..23273,23453..23907,24000..24109,24190..24338)	Acanthamoeba castellanii str. Neff	14919134
ACA1_321620	CDS	ACA1_321620	NW_004457475.1	24517	27347	R	encoded by transcript ACA1_321620A; serine/threonine protein kinase	complement(join(24517..24915,25020..25225,25342..25770,25835..25943,26025..27122,27240..27347))	Acanthamoeba castellanii str. Neff	14919135
ACA1_310050	CDS	ACA1_310050	NW_004457473.1	1194	3410	D	encoded by transcript ACA1_310050A; uncharacterized protein	join(1194..1344,1387..1492,1573..1795,2418..2540,2612..2677,2762..3004,3102..3410)	Acanthamoeba castellanii str. Neff	14919123
ACA1_310370	CDS	ACA1_310370	NW_004457473.1	5598	5915	D	encoded by transcript ACA1_310370A; uncharacterized protein	join(5598..5784,5863..>5915)	Acanthamoeba castellanii str. Neff	14919121
ACA1_310480	CDS	ACA1_310480	NW_004457473.1	6277	8787	R	encoded by transcript ACA1_310480A; uncharacterized protein	complement(join(6277..6492,6581..6751,6892..7166,7283..7555,7634..7975,8084..8133,8246..8608,8747..8787))	Acanthamoeba castellanii str. Neff	14919124
ACA1_310490	CDS	ACA1_310490	NW_004457473.1	9037	11131	D	encoded by transcript ACA1_310490A; SET domain containing protein	join(9037..9094,9193..9332,9423..9520,9604..9695,9823..9903,9978..10045,10181..10300,10412..10913,10995..11131)	Acanthamoeba castellanii str. Neff	14919125
ACA1_310500	CDS	ACA1_310500	NW_004457473.1	11476	13052	D	encoded by transcript ACA1_310500A; uncharacterized protein	join(11476..11562,11671..11761,11823..12113,12190..12551,12822..13052)	Acanthamoeba castellanii str. Neff	14919126
ACA1_310610	CDS	ACA1_310610	NW_004457473.1	13136	15127	R	encoded by transcript ACA1_310610A; saccharopine dehydrogenase	complement(join(13136..13162,13239..13565,13674..13799,13899..14188,14271..14449,14574..14666,14808..15127))	Acanthamoeba castellanii str. Neff	14919127
ACA1_310620	CDS	ACA1_310620	NW_004457473.1	15518	18556	R	encoded by transcript ACA1_310620A; protein kinase domain containing protein	complement(join(15518..15889,15970..16204,16286..16862,16945..17019,17086..17259,17353..17697,17785..18243,18355..18556))	Acanthamoeba castellanii str. Neff	14919128
ACA1_310630	CDS	ACA1_310630	NW_004457473.1	19298	20194	R	encoded by transcript ACA1_310630A; allergen v5/tpx1 family protein	complement(join(19298..19345,19423..19669,19767..19972,20075..20194))	Acanthamoeba castellanii str. Neff	14919129
ACA1_119590	CDS	ACA1_119590	NW_004457471.1	944	2362	R	encoded by transcript ACA1_119590A; HAD hydrolase, family IIA subfamily protein	complement(join(944..1036,1058..1098,1192..1348,1432..1632,1787..1952,2043..2362))	Acanthamoeba castellanii str. Neff	14919114
ACA1_119600	CDS	ACA1_119600	NW_004457471.1	2504	4430	D	encoded by transcript ACA1_119600A; uncharacterized protein	join(2504..2724,2805..2923,3000..3076,3183..3460,3549..3805,3914..4122,4212..4430)	Acanthamoeba castellanii str. Neff	14919120
ACA1_119610	CDS	ACA1_119610	NW_004457471.1	4683	6730	D	encoded by transcript ACA1_119610A; uncharacterized protein	join(4683..4722,4777..4885,5001..5122,5250..5326,5455..5616,5713..5807,5913..6169,6241..6449,6533..6730)	Acanthamoeba castellanii str. Neff	14919115
ACA1_119730	CDS	ACA1_119730	NW_004457471.1	9184	10556	D	encoded by transcript ACA1_119730A; uncharacterized protein	join(9184..9379,9491..9583,9709..9804,9874..10017,10092..10219,10285..10407,10521..10556)	Acanthamoeba castellanii str. Neff	14919118
ACA1_119840	CDS	ACA1_119840	NW_004457471.1	15685	16168	D	encoded by transcript ACA1_119840A; ubiquitinlike protein	join(15685..15786,15859..16023,16121..16168)	Acanthamoeba castellanii str. Neff	14919116
ACA1_367650	CDS	ACA1_367650	NW_004457466.1	1262	3342	D	encoded by transcript ACA1_367650A; uncharacterized protein	join(1262..2417,2578..3136,3162..3342)	Acanthamoeba castellanii str. Neff	14919025
ACA1_367760	CDS	ACA1_367760	NW_004457466.1	3761	4198	D	encoded by transcript ACA1_367760A; uncharacterized protein	join(3761..3814,3832..4173,4193..4198)	Acanthamoeba castellanii str. Neff	14918988
ACA1_367770	CDS	ACA1_367770	NW_004457466.1	4485	6030	R	encoded by transcript ACA1_367770A; RhoGAP domain containing protein	complement(join(4485..4725,4810..4958,5060..5135,5210..5362,5456..5550,5623..5763,5893..6030))	Acanthamoeba castellanii str. Neff	14918986
ACA1_367880	CDS	ACA1_367880	NW_004457466.1	6417	7482	R	encoded by transcript ACA1_367880A; uncharacterized protein	complement(join(6417..6427,6456..7482))	Acanthamoeba castellanii str. Neff	14918987
ACA1_367890	CDS	ACA1_367890	NW_004457466.1	8102	9632	R	encoded by transcript ACA1_367890A; uncharacterized protein	complement(join(8102..8291,8390..8464,8549..8616,8765..8887,8974..9160,9277..9478,9563..9632))	Acanthamoeba castellanii str. Neff	14918989
ACA1_367900	CDS	ACA1_367900	NW_004457466.1	9872	11226	D	encoded by transcript ACA1_367900A; Raslike GTP-binding protein YPT1, putative	join(9872..9900,10009..10081,10190..10237,10333..10563,10687..10728,10859..10965,11118..11226)	Acanthamoeba castellanii str. Neff	14918990
ACA1_367910	CDS	ACA1_367910	NW_004457466.1	11811	14523	D	encoded by transcript ACA1_367910A; transporter, major facilitator subfamily protein	join(11811..12044,12210..12429,12589..12702,12798..13180,13229..13328,13433..13552,13652..13857,13941..14103,14216..14523)	Acanthamoeba castellanii str. Neff	14918991
ACA1_367920	CDS	ACA1_367920	NW_004457466.1	14814	15717	R	encoded by transcript ACA1_367920A; uncharacterized protein	complement(join(14814..15210,15374..15717))	Acanthamoeba castellanii str. Neff	14918992
ACA1_367930	CDS	ACA1_367930	NW_004457466.1	15984	16559	R	encoded by transcript ACA1_367930A; ATP synthase, Delta/Epsilon chain, betasandwich domain containing protein	complement(15984..16559)	Acanthamoeba castellanii str. Neff	14918993
ACA1_367940	CDS	ACA1_367940	NW_004457466.1	17066	19638	D	encoded by transcript ACA1_367940A; ATP synthase, putative	join(17066..17207,17338..17646,17793..18095,18229..18711,18830..19638)	Acanthamoeba castellanii str. Neff	14918994
ACA1_367950	CDS	ACA1_367950	NW_004457466.1	19849	21929	D	encoded by transcript ACA1_367950A; protein kinase domain containing protein	join(19849..20302,20462..20585,20674..20951,21020..21154,21186..21408,21500..21929)	Acanthamoeba castellanii str. Neff	14918995
ACA1_367960	CDS	ACA1_367960	NW_004457466.1	22027	22614	D	encoded by transcript ACA1_367960A; microsomal signal peptidase 25 kda subunit (spc25) protein	22027..22614	Acanthamoeba castellanii str. Neff	14918996
ACA1_367970	CDS	ACA1_367970	NW_004457466.1	22985	29184	D	encoded by transcript ACA1_367970A; regulator of chromosome condensation (RCC1) repeat domain containing protein	join(22985..23279,23399..23426,23543..23670,23771..23896,24045..24330,24389..24491,24651..24822,24913..25013,25077..25151,25254..27651,27761..27874,27994..28188,28267..28396,28503..29184)	Acanthamoeba castellanii str. Neff	14918997
ACA1_367980	CDS	ACA1_367980	NW_004457466.1	29341	32084	R	encoded by transcript ACA1_367980A; uncharacterized protein	complement(join(29341..29525,29618..29785,29892..30033,30117..30200,30278..30462,30575..30668,30759..30991,31089..31206,31333..31424,31505..31619,31722..32084))	Acanthamoeba castellanii str. Neff	14918998
ACA1_367990	CDS	ACA1_367990	NW_004457466.1	32322	33236	D	encoded by transcript ACA1_367990A; NEDD8conjugating enzyme Ubc12, putative	join(32322..32601,32702..33003,33099..33236)	Acanthamoeba castellanii str. Neff	14918999
ACA1_368010	CDS	ACA1_368010	NW_004457466.1	36900	37594	D	encoded by transcript ACA1_368010A; uncharacterized protein	join(36900..36940,37005..37184,37255..37358,37449..37594)	Acanthamoeba castellanii str. Neff	14918891
ACA1_368020	CDS	ACA1_368020	NW_004457466.1	37690	38320	R	encoded by transcript ACA1_368020A; RINGbox protein 1, putative	complement(join(37690..37727,37819..37950,38031..38081,38170..38320))	Acanthamoeba castellanii str. Neff	14918892
ACA1_368030	CDS	ACA1_368030	NW_004457466.1	38508	39928	R	encoded by transcript ACA1_368030A; Brix domain containing protein	complement(join(38508..38702,38714..38848,38916..39077,39123..39296,39397..39633,39770..39928))	Acanthamoeba castellanii str. Neff	14918893
ACA1_368040	CDS	ACA1_368040	NW_004457466.1	40273	41874	D	encoded by transcript ACA1_368040A; uncharacterized protein	join(40273..40278,40395..40677,40800..40943,41022..41140,41233..41374,41465..41610,41704..41874)	Acanthamoeba castellanii str. Neff	14918894
ACA1_368050	CDS	ACA1_368050	NW_004457466.1	42181	43081	D	encoded by transcript ACA1_368050A; methylmalonylCoA epimerase	join(42181..42255,42479..42586,42678..42824,42929..43081)	Acanthamoeba castellanii str. Neff	14918895
ACA1_368060	CDS	ACA1_368060	NW_004457466.1	43361	46789	D	encoded by transcript ACA1_368060A; leucine rich repeat domain containing protein	join(43361..44389,44532..44836,44897..45032,45129..46053,46175..46321,46399..46486,46567..46789)	Acanthamoeba castellanii str. Neff	14918896
ACA1_368070	CDS	ACA1_368070	NW_004457466.1	46863	47282	R	encoded by transcript ACA1_368070A; uncharacterized protein	complement(46863..47282)	Acanthamoeba castellanii str. Neff	14918897
ACA1_368080	CDS	ACA1_368080	NW_004457466.1	47478	50512	R	encoded by transcript ACA1_368080A; uncharacterized protein	complement(join(47478..48062,48126..48424,48547..49179,49281..49417,49489..49774,50068..50512))	Acanthamoeba castellanii str. Neff	14918898
ACA1_368090	CDS	ACA1_368090	NW_004457466.1	51780	53759	R	encoded by transcript ACA1_368090A; slime mold cyclic amp receptor protein	complement(join(51780..51858,51934..52138,52209..52379,52460..52587,52664..52718,52793..52883,52959..53152,53257..53348,53443..53507,53682..53759))	Acanthamoeba castellanii str. Neff	14918899
ACA1_368100	CDS	ACA1_368100	NW_004457466.1	53940	55646	D	encoded by transcript ACA1_368100A; phosphotransferase enzyme domain containing protein	join(53940..54137,54244..54347,54421..54571,54650..54777,54866..55075,55162..55315,55395..55646)	Acanthamoeba castellanii str. Neff	14918900
ACA1_368110	CDS	ACA1_368110	NW_004457466.1	56036	58677	D	encoded by transcript ACA1_368110A; Fbox domain containing protein	join(56036..56254,56338..56916,56981..57086,57168..57236,57347..57481,57550..57668,57742..57847,57930..58309,58474..58677)	Acanthamoeba castellanii str. Neff	14918901
ACA1_368120	CDS	ACA1_368120	NW_004457466.1	59156	61252	D	encoded by transcript ACA1_368120A; Fbox domain containing protein	join(59156..59518,59614..60373,60442..60539,60632..60861,60957..61092,61172..61252)	Acanthamoeba castellanii str. Neff	14918902
ACA1_368130	CDS	ACA1_368130	NW_004457466.1	61878	63095	R	encoded by transcript ACA1_368130A; uncharacterized protein	complement(61878..63095)	Acanthamoeba castellanii str. Neff	14918903
ACA1_368140	CDS	ACA1_368140	NW_004457466.1	64314	66871	R	encoded by transcript ACA1_368140A; glutamine amidotransferase	complement(join(64314..65474,65570..65693,65790..66043,66119..66267,66373..66404,66481..66573,66651..66756,66835..66871))	Acanthamoeba castellanii str. Neff	14918904
ACA1_368150	CDS	ACA1_368150	NW_004457466.1	67581	68865	R	encoded by transcript ACA1_368150A; synaptobrevin protein	complement(join(67581..67691,67882..68567,68787..68865))	Acanthamoeba castellanii str. Neff	14918905
ACA1_368160	CDS	ACA1_368160	NW_004457466.1	69245	70863	D	encoded by transcript ACA1_368160A; uncharacterized protein	join(69245..69271,69496..70498,70610..70863)	Acanthamoeba castellanii str. Neff	14918906
ACA1_368170	CDS	ACA1_368170	NW_004457466.1	71093	71756	D	encoded by transcript ACA1_368170A; actin related protein 2/3 complex, subunit 5like, putative	join(71093..71184,71348..71420,71538..71756)	Acanthamoeba castellanii str. Neff	14918907
ACA1_368180	CDS	ACA1_368180	NW_004457466.1	71956	73988	R	encoded by transcript ACA1_368180A; bacterial transferase hexapeptide repeat-containing protein	complement(join(71956..72008,72141..72244,72315..72463,72535..72627,72689..72849,72943..73106,73185..73514,73549..73720,73790..73988))	Acanthamoeba castellanii str. Neff	14918908
ACA1_368190	CDS	ACA1_368190	NW_004457466.1	74143	75019	D	encoded by transcript ACA1_368190A; uncharacterized protein	join(74143..74247,74346..74537,74618..74697,74765..74887,74971..75019)	Acanthamoeba castellanii str. Neff	14918909
ACA1_368200	CDS	ACA1_368200	NW_004457466.1	75177	78684	R	encoded by transcript ACA1_368200A; uncharacterized protein	complement(join(75177..75320,75401..75544,75611..75766,75874..76032,76112..76199,76269..76341,76425..76631,76729..76810,76885..77027,77149..77273,77416..77483,77560..77685,77815..77920,77989..78077,78214..78281,78358..78534,78624..78684))	Acanthamoeba castellanii str. Neff	14918910
ACA1_368210	CDS	ACA1_368210	NW_004457466.1	78806	80102	D	encoded by transcript ACA1_368210A; DNA repair protein XRCC3, putative	join(78806..79853,79939..80102)	Acanthamoeba castellanii str. Neff	14918911
ACA1_368220	CDS	ACA1_368220	NW_004457466.1	80375	83364	R	encoded by transcript ACA1_368220A; uncharacterized protein	complement(join(80375..80823,80958..81339,81467..81597,81695..81896,81981..82196,82288..82761,82947..83102,83191..83364))	Acanthamoeba castellanii str. Neff	14918912
ACA1_368230	CDS	ACA1_368230	NW_004457466.1	83575	85978	R	encoded by transcript ACA1_368230A; C2 domain containing protein	complement(join(83575..83896,84046..84177,84272..85074,85159..85448,85534..85669,85736..85978))	Acanthamoeba castellanii str. Neff	14918913
ACA1_368240	CDS	ACA1_368240	NW_004457466.1	86299	88264	D	encoded by transcript ACA1_368240A; uncharacterized protein	join(86299..86495,86555..86826,86924..87018,87185..87226,87315..87606,87693..87904,87968..88077,88162..88264)	Acanthamoeba castellanii str. Neff	14918914
ACA1_368250	CDS	ACA1_368250	NW_004457466.1	88366	90777	R	encoded by transcript ACA1_368250A; LBP / BPI / CETP family, Cterminal domain containing protein	complement(join(88366..88463,88556..88688,88764..88835,88907..89013,89092..89166,89244..89375,89467..89583,89669..89808,89881..89970,90052..90161,90269..90320,90390..90501,90594..90777))	Acanthamoeba castellanii str. Neff	14918915
ACA1_368260	CDS	ACA1_368260	NW_004457466.1	91966	95898	D	encoded by transcript ACA1_368260A; Phosphatidylinositolspecific phospholipase C, X domain containing protein	join(91966..92431,92500..92710,92786..92942,93015..93149,93221..93875,93963..94105,94176..94327,94379..94494,94569..94724,94791..94962,95040..95232,95299..95362,95434..95603,95668..95898)	Acanthamoeba castellanii str. Neff	14918916
ACA1_368270	CDS	ACA1_368270	NW_004457466.1	96623	101034	D	encoded by transcript ACA1_368270A; putative DNA helicase	join(96623..96745,96818..96959,97062..97475,97518..97741,97816..97940,98022..98188,98251..98355,98417..98492,98503..98641,98711..98806,98883..99117,99171..99357,99440..100271,100347..100417,100491..100583,100675..100828,100891..101034)	Acanthamoeba castellanii str. Neff	14918917
ACA1_368280	CDS	ACA1_368280	NW_004457466.1	101257	110878	D	encoded by transcript ACA1_368280A; Armadillo/betacatenin-like repeat domain containing protein	join(101257..101551,101697..101786,101849..101950,102088..102210,102322..102444,102566..102672,102774..102915,102994..103137,103225..103332,103454..103615,103709..103828,103913..104080,104177..104302,104384..104518,104601..104699,104762..105292,105381..105559,105642..105729,105800..107609,107701..107711,107732..108403,108472..108776,108861..108984,109052..109206,109300..109425,109511..109711,109784..109910,110029..110135,110276..110392,110465..110569,110684..110878)	Acanthamoeba castellanii str. Neff	14918918
ACA1_368290	CDS	ACA1_368290	NW_004457466.1	111432	113524	D	encoded by transcript ACA1_368290A; uncharacterized protein	join(111432..112496,112606..112703,112870..112958,113044..113185,113256..113329,113424..113524)	Acanthamoeba castellanii str. Neff	14918919
ACA1_368300	CDS	ACA1_368300	NW_004457466.1	113662	116432	R	encoded by transcript ACA1_368300A; ELMO/CED12 family protein	complement(join(113662..113748,113810..113940,114031..114111,114186..114366,114502..114585,114688..114762,114930..115063,115136..115203,115317..115415,115525..115649,115741..115984,116062..116227,116318..116432))	Acanthamoeba castellanii str. Neff	14918920
ACA1_368310	CDS	ACA1_368310	NW_004457466.1	116531	117376	R	encoded by transcript ACA1_368310A; uncharacterized protein	complement(join(116531..116976,117079..117112,117176..117376))	Acanthamoeba castellanii str. Neff	14918921
ACA1_368320	CDS	ACA1_368320	NW_004457466.1	117532	119244	R	encoded by transcript ACA1_368320A; metal cation transporter, ZIP subfamily protein	complement(join(117532..117702,117797..118042,118122..118204,118287..118468,118557..118681,118777..118833,118915..119244))	Acanthamoeba castellanii str. Neff	14918922
ACA1_368430	CDS	ACA1_368430	NW_004457466.1	120571	122079	R	encoded by transcript ACA1_368430A; carnitine/acylcarnitine translocase, putative	complement(join(120571..120592,120793..120859,121000..121119,121204..121321,121400..121527,121625..121755,121871..122079))	Acanthamoeba castellanii str. Neff	14918923
ACA1_368550	CDS	ACA1_368550	NW_004457466.1	126778	127796	D	encoded by transcript ACA1_368550A; uncharacterized protein	join(126778..126847,126860..126927,127044..127129,127202..127796)	Acanthamoeba castellanii str. Neff	14918925
ACA1_368560	CDS	ACA1_368560	NW_004457466.1	128404	132813	R	encoded by transcript ACA1_368560A; protein kinase domain containing protein	complement(join(128404..128461,128573..128767,129094..130080,130173..130465,130581..130757,130887..131083,131192..131306,131408..131489,131597..131733,131832..132020,132079..132224,132323..132371,132484..132648,132715..132813))	Acanthamoeba castellanii str. Neff	14918926
ACA1_368670	CDS	ACA1_368670	NW_004457466.1	133406	135046	R	encoded by transcript ACA1_368670A; GTPase of unknown function subfamily protein	complement(join(133406..133515,133663..133824,133905..134063,134143..134221,134288..134366,134429..134510,134776..135046))	Acanthamoeba castellanii str. Neff	14918927
ACA1_368680	CDS	ACA1_368680	NW_004457466.1	135132	138638	R	encoded by transcript ACA1_368680A; acyltransferase domain containing protein	complement(join(135132..135444,135518..135825,135920..136000,136094..136202,136291..136403,136488..136656,136725..136842,136917..137043,137113..137267,137350..137444,137543..137709,137774..137962,138097..138237,138324..138379,138458..138638))	Acanthamoeba castellanii str. Neff	14918928
ACA1_368690	CDS	ACA1_368690	NW_004457466.1	139005	139954	R	encoded by transcript ACA1_368690A; EF hand domain containing protein	complement(join(139005..139085,139178..139279,139343..139431,139493..139566,139628..139793,139894..139954))	Acanthamoeba castellanii str. Neff	14918929
ACA1_368700	CDS	ACA1_368700	NW_004457466.1	140122	141285	R	encoded by transcript ACA1_368700A; uncharacterized protein	complement(join(140122..140250,140315..140516,140597..140703,140790..140966,141053..141165,141243..141285))	Acanthamoeba castellanii str. Neff	14918930
ACA1_368710	CDS	ACA1_368710	NW_004457466.1	141383	144034	D	encoded by transcript ACA1_368710A; diphosphate-fructose-6-phosphate 1-phosphotransferase	join(141383..141515,141642..141742,141835..141946,142029..142185,142218..142300,142396..142466,142544..142674,142782..142885,142971..143272,143424..143850,143937..144034)	Acanthamoeba castellanii str. Neff	14918931
ACA1_368720	CDS	ACA1_368720	NW_004457466.1	144122	148483	R	encoded by transcript ACA1_368720A; formin domain containing protein	complement(join(144122..144457,144572..144715,144806..144961,145061..145153,145306..145464,145558..145934,146044..146233,146359..146860,146991..148483))	Acanthamoeba castellanii str. Neff	14918932
ACA1_368730	CDS	ACA1_368730	NW_004457466.1	148924	150443	R	encoded by transcript ACA1_368730A; oxidoreductase with FAD/NAD(P)-binding domain containing protein, putative	complement(join(148924..148987,149089..149257,149359..149718,149810..149914,149998..150183,150281..150443))	Acanthamoeba castellanii str. Neff	14918933
ACA1_368740	CDS	ACA1_368740	NW_004457466.1	151054	153631	D	encoded by transcript ACA1_368740A; amino acid permease superfamily protein	join(151054..151740,151868..151992,152141..152204,152320..152608,152726..152947,153057..153353,153423..153631)	Acanthamoeba castellanii str. Neff	14919072
ACA1_368750	CDS	ACA1_368750	NW_004457466.1	153818	154702	R	encoded by transcript ACA1_368750A; histidine kinase family protein	complement(join(153818..154294,154375..154488,154556..154702))	Acanthamoeba castellanii str. Neff	14919073
ACA1_368760	CDS	ACA1_368760	NW_004457466.1	154972	155781	R	encoded by transcript ACA1_368760A; uncharacterized protein	complement(join(154972..155136,155260..155315,155384..155510,155595..155635,155742..155781))	Acanthamoeba castellanii str. Neff	14919074
ACA1_368770	CDS	ACA1_368770	NW_004457466.1	156119	159357	R	encoded by transcript ACA1_368770A; SLTPS/P, putative	complement(join(156119..156337,156408..156783,156853..157034,157107..157312,157399..157495,157573..157685,157758..157874,157951..158083,158157..158287,158381..158587,158669..158727,158806..158958,158987..159357))	Acanthamoeba castellanii str. Neff	14919075
ACA1_368780	CDS	ACA1_368780	NW_004457466.1	160057	161529	R	encoded by transcript ACA1_368780A; cytidine and deoxycytidylate deaminase zincbinding region domain containing protein	complement(join(160057..160237,160297..160391,160520..160564,160634..160739,160819..161011,161073..161158,161238..161289,161385..161529))	Acanthamoeba castellanii str. Neff	14919076
ACA1_368790	CDS	ACA1_368790	NW_004457466.1	162216	165008	D	encoded by transcript ACA1_368790A; ABC2 type transporter superfamily protein	join(162216..162584,162762..162884,162964..163320,163398..163548,163634..163790,163892..164127,164198..164352,164421..164558,164637..164760,164821..165008)	Acanthamoeba castellanii str. Neff	14919077
ACA1_368800	CDS	ACA1_368800	NW_004457466.1	165453	166846	D	encoded by transcript ACA1_368800A; uncharacterized protein	join(165453..165640,165732..165901,166010..166210,166302..166846)	Acanthamoeba castellanii str. Neff	14919078
ACA1_368810	CDS	ACA1_368810	NW_004457466.1	167075	168695	D	encoded by transcript ACA1_368810A; uncharacterized protein	join(167075..167323,167396..167557,167624..167675,167744..167840,167917..168068,168161..168218,168284..168342,168418..168695)	Acanthamoeba castellanii str. Neff	14919079
ACA1_368820	CDS	ACA1_368820	NW_004457466.1	168921	170517	D	encoded by transcript ACA1_368820A; K+ channel tetramerization subfamily protein	join(168921..168939,169130..170517)	Acanthamoeba castellanii str. Neff	14919080
ACA1_368830	CDS	ACA1_368830	NW_004457466.1	170648	171883	R	encoded by transcript ACA1_368830A; methionine aminopeptidase, type I, putative	complement(join(170648..170793,170879..170918,171001..171109,171189..171268,171364..171550,171615..171685,171737..171883))	Acanthamoeba castellanii str. Neff	14919081
ACA1_368840	CDS	ACA1_368840	NW_004457466.1	172352	172819	D	encoded by transcript ACA1_368840A; aspartyl/glutamyltRNA(Asn/Gln) amidotransferase, C subunit	join(172352..172534,172571..172819)	Acanthamoeba castellanii str. Neff	14919082
ACA1_368850	CDS	ACA1_368850	NW_004457466.1	173463	176847	D	encoded by transcript ACA1_368850A; trehalosephosphatase	join(173463..173577,173672..173737,173837..174050,174082..174170,174260..174382,174464..174549,174624..174749,174838..175061,175144..175299,175383..175550,175627..176098,176196..176538,176633..176847)	Acanthamoeba castellanii str. Neff	14919083
ACA1_368860	CDS	ACA1_368860	NW_004457466.1	177181	177999	D	encoded by transcript ACA1_368860A; universal stress domain containing protein	join(177181..177530,177654..177999)	Acanthamoeba castellanii str. Neff	14919084
ACA1_368870	CDS	ACA1_368870	NW_004457466.1	178133	180344	R	encoded by transcript ACA1_368870A; ATPdependent RNA helicase DBP2, putative	complement(join(178133..178208,178257..178362,178484..178546,178614..178736,178818..179047,179160..179338,179425..179579,179666..>180344))	Acanthamoeba castellanii str. Neff	14919085
ACA1_368880	CDS	ACA1_368880	NW_004457466.1	180659	182926	D	encoded by transcript ACA1_368880A; tetratricopeptide repeat domain containing protein	join(180659..181158,181238..181367,181495..181613,181713..182110,182188..182711,182792..182926)	Acanthamoeba castellanii str. Neff	14919086
ACA1_368890	CDS	ACA1_368890	NW_004457466.1	183021	187622	D	encoded by transcript ACA1_368890A; DNA repair helicase (rad3) subfamily protein	join(183021..183228,183365..183469,183563..183730,183816..184113,184179..184417,184489..184586,184648..184698,184780..184902,184981..185180,185262..185416,185504..185595,185662..185754,185821..186039,186239..186324,186406..186484,186573..186959,187029..187230,187304..187407,187449..187622)	Acanthamoeba castellanii str. Neff	14919087
ACA1_368900	CDS	ACA1_368900	NW_004457466.1	188176	192062	D	encoded by transcript ACA1_368900A; glycosyl hydrolase family 65 central catalytic domain containing protein	join(188176..188297,188377..188499,188753..188868,188950..189030,189138..189290,189323..189600,189628..189886,189976..190123,190499..190560,190651..190757,190832..190952,191026..191301,191374..192062)	Acanthamoeba castellanii str. Neff	14919088
ACA1_368910	CDS	ACA1_368910	NW_004457466.1	192231	196562	D	encoded by transcript ACA1_368910A; MORN repeatcontaining protein	join(192231..192925,193127..193214,193307..193379,193449..193582,193687..193837,193961..194058,194118..194186,194268..194325,194436..194554,194644..194711,194840..195113,195284..195469,195559..195761,195872..196169,196239..196562)	Acanthamoeba castellanii str. Neff	14919089
ACA1_368920	CDS	ACA1_368920	NW_004457466.1	196852	199349	D	encoded by transcript ACA1_368920A; transporter, major facilitator subfamily protein	join(196852..197085,197174..197257,197332..197430,197531..197754,197823..197938,198178..198232,198335..198507,198590..198679,198744..198842,198938..199216,199300..199349)	Acanthamoeba castellanii str. Neff	14919090
ACA1_368930	CDS	ACA1_368930	NW_004457466.1	199475	200101	R	encoded by transcript ACA1_368930A; uncharacterized protein	complement(199475..200101)	Acanthamoeba castellanii str. Neff	14919091
ACA1_368940	CDS	ACA1_368940	NW_004457466.1	201021	202693	D	encoded by transcript ACA1_368940A; GPI-anchor transamidase, putative	join(201021..201056,201102..201206,201296..201386,201484..201562,201633..201724,201805..201937,202025..202184,202291..202389,202468..202545,202619..202693)	Acanthamoeba castellanii str. Neff	14919092
ACA1_368950	CDS	ACA1_368950	NW_004457466.1	202901	204021	R	encoded by transcript ACA1_368950A; methylglyoxal synthase	complement(join(202901..203224,203298..203432,203457..203846,203923..204021))	Acanthamoeba castellanii str. Neff	14919093
ACA1_368960	CDS	ACA1_368960	NW_004457466.1	204252	204620	R	encoded by transcript ACA1_368960A; ribosomal protein L23, putative	complement(204252..204620)	Acanthamoeba castellanii str. Neff	14919094
ACA1_368970	CDS	ACA1_368970	NW_004457466.1	204766	206719	R	encoded by transcript ACA1_368970A; metallobeta-lactamase domain containing protein	complement(join(204766..204867,204963..205048,205118..205298,205370..205549,205651..205711,205813..206033,206113..206231,206309..206398,206587..206719))	Acanthamoeba castellanii str. Neff	14919095
ACA1_368980	CDS	ACA1_368980	NW_004457466.1	206933	211234	R	encoded by transcript ACA1_368980A; dynamin domain containing protein	complement(join(206933..206967,207062..207225,207303..207450,207532..207611,207735..208036,208153..208220,208309..208606,208677..208803,208984..209360,209432..209613,209683..209811,209885..209997,210099..211008,211147..211234))	Acanthamoeba castellanii str. Neff	14919096
ACA1_368990	CDS	ACA1_368990	NW_004457466.1	211761	212991	D	encoded by transcript ACA1_368990A; uncharacterized protein	join(211761..211927,211989..212050,212115..212291,212382..212876,212954..212991)	Acanthamoeba castellanii str. Neff	14919097
ACA1_369000	CDS	ACA1_369000	NW_004457466.1	213087	214053	R	encoded by transcript ACA1_369000A; peroxidase	complement(join(213087..213295,213412..213618,213699..213815,213924..214053))	Acanthamoeba castellanii str. Neff	14919098
ACA1_369010	CDS	ACA1_369010	NW_004457466.1	214305	224104	R	encoded by transcript ACA1_369010A; polymerase (DNA directed), epsilon, putative	complement(join(214305..214386,214469..214603,214687..214777,214845..215010,215104..215209,215294..215501,215562..215713,215784..215921,216004..216051,216121..216533,216557..216718,216808..216922,217003..217116,217189..217346,217426..217544,217604..217864,217953..218073,218139..218285,218365..218458,218545..218665,218763..219013,219087..219210,219280..219447,219525..219687,219751..219889,219954..220152,220215..220308,220372..220525,220599..220752,220826..220976,221047..221173,221250..221479,221579..221887,221964..222107,222179..222360,222433..222448,222466..222624,222692..222856,222921..223011,223083..223248,223311..223468,223531..223685,223766..223858,223922..223981,224045..224104))	Acanthamoeba castellanii str. Neff	14919099
ACA1_369020	CDS	ACA1_369020	NW_004457466.1	224621	225255	D	encoded by transcript ACA1_369020A; acetyltransferase, GNAT family protein	join(224621..224927,225056..225255)	Acanthamoeba castellanii str. Neff	14919100
ACA1_369030	CDS	ACA1_369030	NW_004457466.1	225627	226676	R	encoded by transcript ACA1_369030A; uncharacterized protein	complement(join(225627..225830,225928..225957,226128..226220,226280..226375,226452..226526,226656..226676))	Acanthamoeba castellanii str. Neff	14919101
ACA1_369040	CDS	ACA1_369040	NW_004457466.1	226923	227802	R	encoded by transcript ACA1_369040A; uncharacterized protein	complement(join(226923..226988,227069..227158,227340..227419,227487..227621,227754..227802))	Acanthamoeba castellanii str. Neff	14919102
ACA1_369050	CDS	ACA1_369050	NW_004457466.1	227955	230337	D	encoded by transcript ACA1_369050A; uncharacterized protein	join(227955..228327,228479..228530,228617..228702,228821..229013,229112..229187,229244..229537,229596..229789,229883..230010,230068..230144,230239..230337)	Acanthamoeba castellanii str. Neff	14919103
ACA1_369060	CDS	ACA1_369060	NW_004457466.1	230418	230863	D	encoded by transcript ACA1_369060A; Ubiquitin-related modifier 1 family protein	join(230418..230440,230528..230677,230746..230863)	Acanthamoeba castellanii str. Neff	14919104
ACA1_369070	CDS	ACA1_369070	NW_004457466.1	230931	231347	R	encoded by transcript ACA1_369070A; uncharacterized protein	complement(230931..231347)	Acanthamoeba castellanii str. Neff	14919105
ACA1_369080	CDS	ACA1_369080	NW_004457466.1	231451	238748	R	encoded by transcript ACA1_369080A; UDPglucose:Glycoprotein Glucosyltransferase containing protein	complement(join(231451..231666,231771..231969,232056..232249,232316..232645,232749..232880,232949..233236,233423..233528,233624..233757,233858..233957,234031..234126,234242..234387,234470..234717,234798..234915,234982..235256,235357..235438,235527..235688,235760..235864,235935..236084,236166..236276,236353..236475,236572..236672,236779..236936,237002..237242,237319..237457,237546..237664,237752..237837,237934..238086,238184..238311,238394..238638,238679..238748))	Acanthamoeba castellanii str. Neff	14919106
ACA1_369090	CDS	ACA1_369090	NW_004457466.1	238988	241891	R	encoded by transcript ACA1_369090A; 2hydroxyacyl-CoA lyase 1, putative	complement(join(238988..239056,239129..239265,239336..239462,239536..239655,239724..239798,239868..240044,240137..240241,240306..240376,240453..240580,240660..240703,240789..240941,241014..241067,241137..241226,241307..241476,241658..241760,241835..241891))	Acanthamoeba castellanii str. Neff	14919107
ACA1_369100	CDS	ACA1_369100	NW_004457466.1	242117	246373	D	encoded by transcript ACA1_369100A; endonuclease/exonuclease/phosphatase family protein	join(242117..242579,242660..242745,242810..242876,242965..243108,243182..243254,243323..243389,243463..243555,243642..243734,243809..243888,243974..244174,244252..244326,244391..244511,244604..244699,244776..245327,245415..245498,245571..245709,245772..246373)	Acanthamoeba castellanii str. Neff	14919108
ACA1_369110	CDS	ACA1_369110	NW_004457466.1	246611	246841	R	encoded by transcript ACA1_369110A; small nuclear ribonucleoprotein G, putative	complement(246611..246841)	Acanthamoeba castellanii str. Neff	14919109
ACA1_369120	CDS	ACA1_369120	NW_004457466.1	247234	248178	D	encoded by transcript ACA1_369120A; proliferating cell nuclear antigen, Nterminal domain containing protein	join(247234..247552,247634..247786,247853..248178)	Acanthamoeba castellanii str. Neff	14919110
ACA1_369130	CDS	ACA1_369130	NW_004457466.1	248690	251862	D	encoded by transcript ACA1_369130A; uncharacterized protein	join(248690..248711,248756..248803,249124..249188,249686..249796,249810..249914,250073..250131,250196..250293,250355..250416,250447..250579,250641..250793,250863..251046,251127..251184,251366..251426,251505..251581,251698..251862)	Acanthamoeba castellanii str. Neff	14919111
ACA1_369140	CDS	ACA1_369140	NW_004457466.1	252018	256271	D	encoded by transcript ACA1_369140A; premRNA-splicing factor ATP-dependent RNA helicase PRP16, putative	join(252018..252231,252244..252344,252425..253077,253163..253853,253912..254173,254265..254455,254562..254642,254736..256271)	Acanthamoeba castellanii str. Neff	14919112
ACA1_369150	CDS	ACA1_369150	NW_004457466.1	256565	261041	R	encoded by transcript ACA1_369150A; uncharacterized protein	complement(join(256565..256904,256980..257222,257324..257732,257811..257943,258039..258275,258357..258608,258699..258780,258870..258949,259032..259154,259253..259392,259569..259646,259748..259871,259934..260165,260246..260353,260424..260530,260721..260806,260900..261041))	Acanthamoeba castellanii str. Neff	14919113
ACA1_369160	CDS	ACA1_369160	NW_004457466.1	261536	264418	D	encoded by transcript ACA1_369160A; leucine aminopeptidase 3, putative	join(261536..261566,261864..261953,262066..262191,262260..262312,262395..262470,262550..262617,262687..262781,262848..262961,263041..263147,263212..263263,263329..263471,263542..263612,263680..263783,263847..263949,264016..264133,264200..264261,264332..264418)	Acanthamoeba castellanii str. Neff	14918845
ACA1_369170	CDS	ACA1_369170	NW_004457466.1	264570	265655	D	encoded by transcript ACA1_369170A; uncharacterized protein	join(264570..264682,264782..264848,264942..265051,265142..265231,265318..265418,265489..265583,265647..265655)	Acanthamoeba castellanii str. Neff	14918846
ACA1_369180	CDS	ACA1_369180	NW_004457466.1	266467	268067	D	encoded by transcript ACA1_369180A; PAP2 superfamily domain containing protein	join(266467..267241,267360..267533,267603..267725,267788..267890,267968..268067)	Acanthamoeba castellanii str. Neff	14918847
ACA1_369190	CDS	ACA1_369190	NW_004457466.1	268413	270611	D	encoded by transcript ACA1_369190A; proteasome (prosome, macropain) 26S subunit, non ATPase, 32, putative	join(268413..268491,268583..268776,268870..269034,269109..269245,269329..269362,269442..269580,269661..269764,269842..270050,270111..270426,270453..270611)	Acanthamoeba castellanii str. Neff	14918848
ACA1_369200	CDS	ACA1_369200	NW_004457466.1	270747	273754	R	encoded by transcript ACA1_369200A; SMP3 mannosyltransferase	complement(join(270747..270901,270975..271043,271117..271186,271262..271537,271621..271871,271976..272105,272214..272356,272454..272601,272672..272780,272862..272940,272984..273040,273066..273152,273236..273306,273402..273754))	Acanthamoeba castellanii str. Neff	14918849
ACA1_369210	CDS	ACA1_369210	NW_004457466.1	273903	274199	R	encoded by transcript ACA1_369210A; DNA binding protein	complement(273903..274199)	Acanthamoeba castellanii str. Neff	14918850
ACA1_369220	CDS	ACA1_369220	NW_004457466.1	274520	278089	R	encoded by transcript ACA1_369220A; IBR domain containing protein	complement(join(274520..274621,274736..274857,274922..275111,275187..275252,275362..275402,275512..275603,275675..275763,275848..275979,276061..276186,276427..276502,276581..276732,276829..276942,277048..277122,277197..277274,277381..277605,277670..277791,277927..278089))	Acanthamoeba castellanii str. Neff	14918851
ACA1_369230	CDS	ACA1_369230	NW_004457466.1	278252	279701	R	encoded by transcript ACA1_369230A; uncharacterized protein	complement(join(278252..278700,278790..278921,279000..279404,279467..279701))	Acanthamoeba castellanii str. Neff	14918852
ACA1_369240	CDS	ACA1_369240	NW_004457466.1	279770	282918	R	encoded by transcript ACA1_369240A; uncharacterized protein	complement(join(279770..279950,280026..280121,280223..280409,280532..281105,281174..281278,281345..281512,281587..281688,281716..281777,281870..281962,282072..282199,282264..282403,282495..282565,282636..282750,282877..282918))	Acanthamoeba castellanii str. Neff	14918853
ACA1_369250	CDS	ACA1_369250	NW_004457466.1	283041	285075	R	encoded by transcript ACA1_369250A; dynactin 50 kda subunit	complement(join(283041..283142,283211..283405,283481..283660,283748..283879,283977..284174,284276..284326,284402..284556,284669..284759,284832..284903,285016..285075))	Acanthamoeba castellanii str. Neff	14918854
ACA1_369260	CDS	ACA1_369260	NW_004457466.1	285183	285809	D	encoded by transcript ACA1_369260A; uncharacterized protein	join(285183..285218,285319..285444,285510..285640,285764..285809)	Acanthamoeba castellanii str. Neff	14918855
ACA1_369270	CDS	ACA1_369270	NW_004457466.1	286193	287232	D	encoded by transcript ACA1_369270A; rasrelated protein Rab-18-like, putative	join(286193..286334,286396..286464,286534..286599,286679..286757,286821..286917,286970..287038,287125..287232)	Acanthamoeba castellanii str. Neff	14918856
ACA1_369280	CDS	ACA1_369280	NW_004457466.1	287432	288592	R	encoded by transcript ACA1_369280A; La domain containing protein	complement(join(287432..287888,287975..288192,288299..288592))	Acanthamoeba castellanii str. Neff	14918857
ACA1_369290	CDS	ACA1_369290	NW_004457466.1	288676	289413	R	encoded by transcript ACA1_369290A; MORN repeat-containing protein	complement(join(288676..289265,289326..289413))	Acanthamoeba castellanii str. Neff	14918858
ACA1_369300	CDS	ACA1_369300	NW_004457466.1	289924	290550	D	encoded by transcript ACA1_369300A; Rasrelated C3 botulinum toxin substrate 2, putative	289924..290550	Acanthamoeba castellanii str. Neff	14918859
ACA1_369310	CDS	ACA1_369310	NW_004457466.1	290654	296932	R	encoded by transcript ACA1_369310A; protein kinase domain containing protein	complement(join(290654..290806,290884..291049,291130..291471,291553..291661,291769..291913,291999..292172,292300..292446,292599..292624,292784..292794,292832..292884,292969..293222,293297..293430,293639..293748,293818..294305,294420..294599,294661..295049,295208..296803,296913..296932))	Acanthamoeba castellanii str. Neff	14918860
ACA1_369320	CDS	ACA1_369320	NW_004457466.1	297394	302251	D	encoded by transcript ACA1_369320A; uncharacterized protein	join(297394..297420,297666..297805,297918..298240,298374..298507,298614..298838,298941..299042,299140..299304,299343..299472,299545..299747,299867..299946,300053..300152,300265..300481,300593..300720,300813..301089,301179..301378,301506..301580,301662..301768,301866..301977,302078..302251)	Acanthamoeba castellanii str. Neff	14918861
ACA1_369330	CDS	ACA1_369330	NW_004457466.1	302477	303451	D	encoded by transcript ACA1_369330A; Ras family protein	join(302477..302542,302612..302657,302749..302810,302936..303009,303079..303451)	Acanthamoeba castellanii str. Neff	14918862
ACA1_369340	CDS	ACA1_369340	NW_004457466.1	304305	304576	R	encoded by transcript ACA1_369340A; uncharacterized protein	complement(join(304305..304388,304514..304576))	Acanthamoeba castellanii str. Neff	14918863
ACA1_369360	CDS	ACA1_369360	NW_004457466.1	306459	307421	D	encoded by transcript ACA1_369360A; thymidylate synthase	join(306459..306797,306924..307136,307152..307421)	Acanthamoeba castellanii str. Neff	14919026
ACA1_369470	CDS	ACA1_369470	NW_004457466.1	307911	309295	R	encoded by transcript ACA1_369470A; uncharacterized protein	complement(join(<307911..308004,308104..308281,308372..308472,308499..308713,308906..309112,309218..309295))	Acanthamoeba castellanii str. Neff	14919027
ACA1_369480	CDS	ACA1_369480	NW_004457466.1	309670	310964	R	encoded by transcript ACA1_369480A; uncharacterized protein	complement(join(309670..309917,309997..310081,310165..310357,310436..310484,310564..310629,310775..310830,310939..310964))	Acanthamoeba castellanii str. Neff	14919028
ACA1_369490	CDS	ACA1_369490	NW_004457466.1	311282	312121	R	encoded by transcript ACA1_369490A; CS domain containing protein	complement(join(311282..311322,311404..311963,312114..312121))	Acanthamoeba castellanii str. Neff	14919029
ACA1_369500	CDS	ACA1_369500	NW_004457466.1	312436	316795	R	encoded by transcript ACA1_369500A; WD domain, Gbeta repeat-containing protein	complement(join(312436..312604,313057..313241,313262..313446,313563..313763,313844..313925,314038..314108,314196..314304,314436..314645,314727..314898,315018..315127,315255..315396,315516..315658,315756..315887,315961..316086,316206..316396,316524..316647,316763..316795))	Acanthamoeba castellanii str. Neff	14919030
ACA1_369510	CDS	ACA1_369510	NW_004457466.1	317288	320420	R	encoded by transcript ACA1_369510A; protein kinase domain containing protein	complement(join(317288..317449,317554..317710,317799..317848,317888..318043,318188..318274,318414..318608,318683..318798,318888..319021,319112..319224,319297..319482,319651..319920,319987..320127,320211..320420))	Acanthamoeba castellanii str. Neff	14919031
ACA1_369520	CDS	ACA1_369520	NW_004457466.1	321081	321894	D	encoded by transcript ACA1_369520A; ribosomal protein L6e, putative	join(321081..321665,321742..321894)	Acanthamoeba castellanii str. Neff	14919032
ACA1_369530	CDS	ACA1_369530	NW_004457466.1	322122	323987	R	encoded by transcript ACA1_369530A; uncharacterized protein	complement(join(322122..322198,322257..322431,322492..322752,322901..322919,322936..322979,323063..323108,323195..323351,323492..323605,323690..323822,323898..323987))	Acanthamoeba castellanii str. Neff	14919033
ACA1_369540	CDS	ACA1_369540	NW_004457466.1	324211	327072	R	encoded by transcript ACA1_369540A; RasGEF domain containing protein	complement(join(324211..324303,324397..324500,324600..324708,324797..325252,325330..325488,325610..325687,325836..325995,326083..326246,326345..326521,326633..326704,326812..326874,326944..327072))	Acanthamoeba castellanii str. Neff	14919034
ACA1_369550	CDS	ACA1_369550	NW_004457466.1	327807	330438	D	encoded by transcript ACA1_369550A; uncharacterized protein	join(327807..327968,328054..328274,328422..328743,328834..328913,329000..329114,329198..329617,329767..329893,329978..330090,330168..330257,330349..330438)	Acanthamoeba castellanii str. Neff	14919035
ACA1_369560	CDS	ACA1_369560	NW_004457466.1	330676	333227	R	encoded by transcript ACA1_369560A; uncharacterized protein	complement(join(330676..331098,331182..331318,331401..331965,332077..332214,332295..332414,332489..332974,333037..333175,333208..333227))	Acanthamoeba castellanii str. Neff	14919036
ACA1_369570	CDS	ACA1_369570	NW_004457466.1	333350	334942	D	encoded by transcript ACA1_369570A; tetratricopeptide repeat domain containing protein	join(333350..333541,333699..333908,334006..334097,334235..334407,334530..334942)	Acanthamoeba castellanii str. Neff	14919037
ACA1_369580	CDS	ACA1_369580	NW_004457466.1	335208	337930	D	encoded by transcript ACA1_369580A; uncharacterized protein	join(335208..335708,335850..335910,335979..336368,336463..337466,337583..337732,337805..337930)	Acanthamoeba castellanii str. Neff	14919038
ACA1_369590	CDS	ACA1_369590	NW_004457466.1	338117	342524	R	encoded by transcript ACA1_369590A; uncharacterized protein	complement(join(338117..338368,338442..338615,338706..338933,339038..339166,339245..339393,339506..339665,339755..339937,340030..340214,340350..340530,340644..340771,340859..341065,341204..341342,341464..341721,341797..341957,342087..342315,342441..342524))	Acanthamoeba castellanii str. Neff	14919039
ACA1_369600	CDS	ACA1_369600	NW_004457466.1	342747	343922	D	encoded by transcript ACA1_369600A; PH domain containing protein	join(342747..342879,343005..343077,343264..343336,343422..343551,343619..343722,343821..343922)	Acanthamoeba castellanii str. Neff	14919040
ACA1_369610	CDS	ACA1_369610	NW_004457466.1	344200	345937	D	encoded by transcript ACA1_369610A; CBS domain containing protein	join(344200..344322,344454..344487,344576..344719,344821..344931,345022..345206,345298..345369,345461..345535,345611..345704,345807..345937)	Acanthamoeba castellanii str. Neff	14919041
ACA1_369620	CDS	ACA1_369620	NW_004457466.1	346084	346308	R	encoded by transcript ACA1_369620A; uncharacterized protein	complement(346084..346308)	Acanthamoeba castellanii str. Neff	14919042
ACA1_369630	CDS	ACA1_369630	NW_004457466.1	346452	346679	R	encoded by transcript ACA1_369630A; uncharacterized protein	complement(346452..346679)	Acanthamoeba castellanii str. Neff	14919043
ACA1_369640	CDS	ACA1_369640	NW_004457466.1	346861	348544	D	encoded by transcript ACA1_369640A; Fbox domain containing protein	join(346861..347277,347370..347522,347618..347695,347802..347861,347946..348108,348230..348297,348371..348544)	Acanthamoeba castellanii str. Neff	14919044
ACA1_369650	CDS	ACA1_369650	NW_004457466.1	349338	350370	D	encoded by transcript ACA1_369650A; 3oxo-5-alpha-steroid 4-dehydrogenase 1, putative	join(349338..349596,349662..349834,349907..350048,350126..350370)	Acanthamoeba castellanii str. Neff	14919045
ACA1_369660	CDS	ACA1_369660	NW_004457466.1	350461	353307	R	encoded by transcript ACA1_369660A; tetratricopeptide repeat domain containing protein	complement(join(350461..350666,350761..350925,350998..351159,351235..351757,351869..352058,352152..352305,352422..352567,352600..352784,352884..353119,353214..353307))	Acanthamoeba castellanii str. Neff	14919046
ACA1_369670	CDS	ACA1_369670	NW_004457466.1	353845	359756	D	encoded by transcript ACA1_369670A; uncharacterized protein	join(353845..354048,354220..354316,354406..354608,354677..354866,354945..355221,355319..355417,355510..355615,355699..355803,355868..356011,356094..356339,356454..356597,356697..356788,356886..357261,357357..357488,357651..357794,357864..357991,358151..358355,358447..358554,358629..358750,358822..358933,359017..359196,359265..359372,359451..359525,359586..359756)	Acanthamoeba castellanii str. Neff	14919047
ACA1_369680	CDS	ACA1_369680	NW_004457466.1	360459	361440	D	encoded by transcript ACA1_369680A; OmpAlike domain containing protein	join(360459..360533,360703..360808,360876..361040,361126..361233,361316..361440)	Acanthamoeba castellanii str. Neff	14919048
ACA1_369690	CDS	ACA1_369690	NW_004457466.1	361660	362636	D	encoded by transcript ACA1_369690A; NEDD8conjugating enzyme Ubc12, putative	join(361660..361948,362012..362196,362294..362410,362496..362636)	Acanthamoeba castellanii str. Neff	14919049
ACA1_369700	CDS	ACA1_369700	NW_004457466.1	362790	364361	R	encoded by transcript ACA1_369700A; Ser/Thr kinase STK, putative	complement(join(362790..363003,363139..363324,363449..363718,363825..363877,364053..364361))	Acanthamoeba castellanii str. Neff	14918964
ACA1_369710	CDS	ACA1_369710	NW_004457466.1	365195	367274	D	encoded by transcript ACA1_369710A; Hypothetical protein	join(365195..365398,365531..365819,365929..366147,366253..366373,366470..367274)	Acanthamoeba castellanii str. Neff	14918965
ACA1_369720	CDS	ACA1_369720	NW_004457466.1	367409	368778	R	encoded by transcript ACA1_369720A; Ras subfamily protein	complement(join(367409..367484,367580..367695,367745..367826,367920..367996,368045..368110,368251..368301,368380..368437,368523..368585,368717..368778))	Acanthamoeba castellanii str. Neff	14918966
ACA1_369730	CDS	ACA1_369730	NW_004457466.1	369055	370607	R	encoded by transcript ACA1_369730A; phosphoglycerate mutase family protein	complement(join(369055..369380,369454..369590,369679..369813,369901..370024,370114..370222,370330..370437,370533..370607))	Acanthamoeba castellanii str. Neff	14918967
ACA1_369740	CDS	ACA1_369740	NW_004457466.1	371143	372598	R	encoded by transcript ACA1_369740A; cyclin, Nterminal domain containing protein	complement(join(371143..371337,371426..371537,371610..371655,371729..371852,371918..372043,372146..372227,372303..372598))	Acanthamoeba castellanii str. Neff	14918968
ACA1_369750	CDS	ACA1_369750	NW_004457466.1	372874	373708	D	encoded by transcript ACA1_369750A; RNA recognition motif domain containing protein	join(372874..372951,373014..373112,373210..373290,373390..373493,373567..373708)	Acanthamoeba castellanii str. Neff	14918969
ACA1_369760	CDS	ACA1_369760	NW_004457466.1	374215	375002	D	encoded by transcript ACA1_369760A; uncharacterized protein	join(374215..374324,374433..374743,374863..375002)	Acanthamoeba castellanii str. Neff	14918970
ACA1_369770	CDS	ACA1_369770	NW_004457466.1	375181	377114	R	encoded by transcript ACA1_369770A; Omethyltransferase domain containing protein	complement(join(375181..375424,375506..375608,375679..375825,375896..376042,376088..376260,376371..376543,376616..376769,377071..377114))	Acanthamoeba castellanii str. Neff	14918971
ACA1_369780	CDS	ACA1_369780	NW_004457466.1	377228	377572	R	encoded by transcript ACA1_369780A; uncharacterized protein	complement(join(377228..377415,377521..377572))	Acanthamoeba castellanii str. Neff	14918972
ACA1_369790	CDS	ACA1_369790	NW_004457466.1	378525	378908	D	encoded by transcript ACA1_369790A; uncharacterized protein	join(378525..378604,378681..378836,378854..378908)	Acanthamoeba castellanii str. Neff	14918973
ACA1_369800	CDS	ACA1_369800	NW_004457466.1	378999	381077	R	encoded by transcript ACA1_369800A; Omethyltransferase domain containing protein	complement(join(378999..379186,379292..379384,379479..379547,379620..379716,379809..379957,380065..380175,380282..380355,380436..380610,380771..381077))	Acanthamoeba castellanii str. Neff	14918974
ACA1_369810	CDS	ACA1_369810	NW_004457466.1	381475	384600	D	encoded by transcript ACA1_369810A; DEAD/DEAH box helicase domain containing protein	join(381475..381726,381798..382053,382139..382344,382456..382586,382688..382820,382949..383053,383158..383246,383339..383394,383551..383666,383748..383864,383968..384600)	Acanthamoeba castellanii str. Neff	14918975
ACA1_369820	CDS	ACA1_369820	NW_004457466.1	384675	387635	R	encoded by transcript ACA1_369820A; BTB/POZ domain containing protein	complement(join(384675..384752,384843..384943,385018..385125,385263..385402,385479..385611,385728..385786,385890..386030,386123..386334,386418..386548,386660..386761,386851..386877,386991..387204,387334..387402,387534..387635))	Acanthamoeba castellanii str. Neff	14918976
ACA1_369830	CDS	ACA1_369830	NW_004457466.1	387844	388821	D	encoded by transcript ACA1_369830A; meiotic nuclear division protein, putative	join(387844..387867,387901..387966,388035..388092,388172..388275,388371..388593,388670..388821)	Acanthamoeba castellanii str. Neff	14918977
ACA1_369840	CDS	ACA1_369840	NW_004457466.1	389024	392040	R	encoded by transcript ACA1_369840A; EGFlike domain containing protein	complement(join(389024..389407,389497..389774,389867..389977,390071..390175,390251..390455,390538..390761,390854..390978,391052..391254,391286..391599,391701..391853,391977..392040))	Acanthamoeba castellanii str. Neff	14918978
ACA1_369850	CDS	ACA1_369850	NW_004457466.1	392551	396237	R	encoded by transcript ACA1_369850A; ATPase with chaperone activity, putative	complement(join(392551..392757,392836..392999,393096..393246,393331..393444,393552..393674,393766..393934,394059..394244,394338..394487,394569..394798,394884..394993,395106..395233,395312..395379,395447..395580,395663..395768,395844..396055,396132..396237))	Acanthamoeba castellanii str. Neff	14918979
ACA1_369860	CDS	ACA1_369860	NW_004457466.1	397076	397733	D	encoded by transcript ACA1_369860A; GTPbinding protein SARA, putative	join(<397076..397192,397265..397360,397436..397576,397647..397733)	Acanthamoeba castellanii str. Neff	14918980
ACA1_369870	CDS	ACA1_369870	NW_004457466.1	397968	399866	R	encoded by transcript ACA1_369870A; eukaryotic translation initiation factor 3 subunit E, putative	complement(join(397968..398000,398082..398160,398236..398483,398557..398776,398872..398969,399069..399296,399398..399697,399777..399866))	Acanthamoeba castellanii str. Neff	14918981
ACA1_369880	CDS	ACA1_369880	NW_004457466.1	400034	402053	D	encoded by transcript ACA1_369880A; uncharacterized protein	join(400034..400121,400236..400264,400334..400493,400569..400671,400767..400911,401013..401048,401135..401233,401306..401481,401558..401681,401758..401970,402039..402053)	Acanthamoeba castellanii str. Neff	14918982
ACA1_369890	CDS	ACA1_369890	NW_004457466.1	402277	403024	R	encoded by transcript ACA1_369890A; uncharacterized protein	complement(join(402277..402418,402493..402644,402704..402776,402847..402895,402973..403024))	Acanthamoeba castellanii str. Neff	14918983
ACA1_369900	CDS	ACA1_369900	NW_004457466.1	403207	404556	D	encoded by transcript ACA1_369900A; uncharacterized protein	join(403207..404006,404104..404254,404359..404556)	Acanthamoeba castellanii str. Neff	14918984
ACA1_369910	CDS	ACA1_369910	NW_004457466.1	404916	405374	D	encoded by transcript ACA1_369910A; uncharacterized protein	404916..405374	Acanthamoeba castellanii str. Neff	14918985
ACA1_369920	CDS	ACA1_369920	NW_004457466.1	405548	410439	R	encoded by transcript ACA1_369920A; cleavage and polyadenylation specificity factor subunit 2, putative	complement(join(405548..405655,405741..405794,405875..405999,406756..406798,406894..406947,407043..407167,407266..407383,407545..407654,407671..407683,407792..407904,408055..408148,408214..408379,408466..408623,408656..408754,408879..409098,409180..409326,409412..409514,409598..409812,409923..410053,410236..410439))	Acanthamoeba castellanii str. Neff	14919050
ACA1_370030	CDS	ACA1_370030	NW_004457466.1	410575	411132	D	encoded by transcript ACA1_370030A; uncharacterized protein	join(410575..410580,410665..410731,410851..410899,410988..411132)	Acanthamoeba castellanii str. Neff	14919051
ACA1_370040	CDS	ACA1_370040	NW_004457466.1	411230	415557	R	encoded by transcript ACA1_370040A; alanine-tRNA ligase	complement(join(411230..411354,411450..411594,411685..412161,412235..412344,412410..412530,412621..412805,412937..413089,413189..413386,413492..413713,413878..413982,414080..414119,414203..414336,414436..414563,414648..414749,414811..414937,415023..415557))	Acanthamoeba castellanii str. Neff	14919052
ACA1_370050	CDS	ACA1_370050	NW_004457466.1	415635	420500	R	encoded by transcript ACA1_370050A; RecF/RecN/SMC domain containing protein	complement(join(415635..415919,415988..416161,416244..416960,417058..417312,417389..417667,417746..418008,418073..418181,418254..418493,418564..419640,419717..420058,420120..420311,420387..420500))	Acanthamoeba castellanii str. Neff	14919053
ACA1_370060	CDS	ACA1_370060	NW_004457466.1	420850	428006	D	encoded by transcript ACA1_370060A; telomeraseassociated protein 1, putative	join(420850..421299,421464..428006)	Acanthamoeba castellanii str. Neff	14919054
ACA1_370070	CDS	ACA1_370070	NW_004457466.1	428996	431845	D	encoded by transcript ACA1_370070A; MyristoylCoA:protein N-myristoyltransferase, C-terminal domain containing protein	join(428996..429735,429866..430107,430192..430411,430514..430630,430738..430847,430935..431155,431247..431455,431526..431583,431663..431845)	Acanthamoeba castellanii str. Neff	14919055
ACA1_370080	CDS	ACA1_370080	NW_004457466.1	431964	435470	R	encoded by transcript ACA1_370080A; ATPdependent RNA helicase Ddx1, putative	complement(join(431964..432155,432268..432521,432639..432803,432882..433014,433103..433173,433234..433330,433430..433686,433788..433990,434053..434194,434303..434473,434529..434678,434765..434896,434984..435113,435202..435231,435336..435470))	Acanthamoeba castellanii str. Neff	14919056
ACA1_370090	CDS	ACA1_370090	NW_004457466.1	435627	436813	R	encoded by transcript ACA1_370090A; uncharacterized protein	complement(join(435627..435762,435854..435984,436061..436176,436265..436370,436448..436507,436584..436653,436737..436813))	Acanthamoeba castellanii str. Neff	14919057
ACA1_370100	CDS	ACA1_370100	NW_004457466.1	436972	438238	D	encoded by transcript ACA1_370100A; uncharacterized protein	join(436972..437116,437159..437388,437503..437575,437691..438238)	Acanthamoeba castellanii str. Neff	14919058
ACA1_370110	CDS	ACA1_370110	NW_004457466.1	438275	439977	D	encoded by transcript ACA1_370110A; uncharacterized protein	join(438275..438461,438528..438670,438740..438854,438958..439121,439186..439320,439407..439523,439636..439977)	Acanthamoeba castellanii str. Neff	14919059
ACA1_370120	CDS	ACA1_370120	NW_004457466.1	440255	442398	D	encoded by transcript ACA1_370120A; Sphingomyelin phosphodiesterase, acidlike 3B, putative	join(440255..440299,440588..440717,440796..440999,441103..441225,441304..441396,441505..441594,441702..441803,441876..442166,442283..442398)	Acanthamoeba castellanii str. Neff	14919060
ACA1_370140	CDS	ACA1_370140	NW_004457466.1	446362	449310	D	encoded by transcript ACA1_370140A; RFX DNAbinding domain containing protein	join(446362..446462,446567..446693,446824..447025,447136..447318,447416..447728,447814..447962,448042..448091,448166..448368,448430..448611,448700..448919,448995..449310)	Acanthamoeba castellanii str. Neff	14919062
ACA1_370150	CDS	ACA1_370150	NW_004457466.1	450423	451952	D	encoded by transcript ACA1_370150A; Nse4 protein	join(450423..450489,450548..450911,450981..451074,451155..451333,451422..451551,451638..451952)	Acanthamoeba castellanii str. Neff	14919063
ACA1_370160	CDS	ACA1_370160	NW_004457466.1	452220	452495	D	encoded by transcript ACA1_370160A; uncharacterized protein	join(452220..452232,452260..452495)	Acanthamoeba castellanii str. Neff	14919064
ACA1_370170	CDS	ACA1_370170	NW_004457466.1	453162	454376	D	encoded by transcript ACA1_370170A; peptidylprolyl cis-trans isomerase, FKBP-type domain containing protein	join(453162..453534,453646..453775,453845..453935,454017..454188,454297..454376)	Acanthamoeba castellanii str. Neff	14919065
ACA1_370180	CDS	ACA1_370180	NW_004457466.1	454517	457496	D	encoded by transcript ACA1_370180A; cytochrome b245 heavy chain, putative	join(454517..454727,454867..454951,455094..455160,455274..455368,455460..455530,455626..455805,455887..455988,456107..456220,456315..456407,456499..456621,456710..456791,456896..457101,457178..457325,457412..457496)	Acanthamoeba castellanii str. Neff	14919066
ACA1_370190	CDS	ACA1_370190	NW_004457466.1	457633	458826	R	encoded by transcript ACA1_370190A; C2 domain containing protein	complement(join(457633..457796,457951..458128,458203..458306,458384..458486,458576..458658,458766..458790,458818..458826))	Acanthamoeba castellanii str. Neff	14919067
ACA1_370200	CDS	ACA1_370200	NW_004457466.1	459082	462890	R	encoded by transcript ACA1_370200A; ABC2 type transporter superfamily protein	complement(join(459082..459276,459393..459554,459638..459738,459830..459921,460012..460153,460262..460341,460440..460513,460611..460742,460817..460893,461048..461237,461344..461427,461560..461619,461692..461829,462030..462113,462184..462296,462393..462443,462597..462746,462866..462890))	Acanthamoeba castellanii str. Neff	14919068
ACA1_370210	CDS	ACA1_370210	NW_004457466.1	463380	466190	D	encoded by transcript ACA1_370210A; WD domain, Gbeta repeat-containing protein	join(463380..463447,463578..463951,464080..464165,464319..464487,464509..464646,464780..465379,465449..465592,465795..465873,465958..466017,466109..466190)	Acanthamoeba castellanii str. Neff	14919069
ACA1_370220	CDS	ACA1_370220	NW_004457466.1	466824	468517	D	encoded by transcript ACA1_370220A; cellulase (glycosyl hydrolase family 5) subfamily protein	join(466824..468277,468295..468517)	Acanthamoeba castellanii str. Neff	14919070
ACA1_370230	CDS	ACA1_370230	NW_004457466.1	468666	469613	R	encoded by transcript ACA1_370230A; calcipressin protein	complement(join(468666..468935,469053..469166,469281..469339,469433..469613))	Acanthamoeba castellanii str. Neff	14919071
ACA1_370240	CDS	ACA1_370240	NW_004457466.1	470611	471836	R	encoded by transcript ACA1_370240A; HAD hydrolase, REG2-like, family IA subfamily protein	complement(join(470611..470656,470751..470884,470957..471139,471197..471253,471320..471423,471497..471695,471756..471836))	Acanthamoeba castellanii str. Neff	14919000
ACA1_370250	CDS	ACA1_370250	NW_004457466.1	472361	473201	D	encoded by transcript ACA1_370250A; uncharacterized protein	join(472361..472419,472479..472566,472622..472766,472834..472953,473020..473201)	Acanthamoeba castellanii str. Neff	14919001
ACA1_370260	CDS	ACA1_370260	NW_004457466.1	473544	478575	D	encoded by transcript ACA1_370260A; TLD family protein	join(473544..473719,473854..473934,474006..474072,474154..474239,474328..474458,474536..474621,474867..474962,475066..475196,475270..475369,475407..475643,475686..475755,475825..475867,475879..475962,476018..476049,476134..476297,476379..476507,476589..476855,476921..477117,477228..477288,477580..477660,477800..477855,477949..477985,478055..478150,478284..478354,478443..478575)	Acanthamoeba castellanii str. Neff	14919002
ACA1_370270	CDS	ACA1_370270	NW_004457466.1	478680	485553	R	encoded by transcript ACA1_370270A; uncharacterized protein	complement(join(478680..478935,479013..479293,479396..479505,479648..479822,480089..480162,480273..480345,480556..480645,480737..480854,480898..481286,481380..481663,481725..481833,481927..482142,482216..482357,482454..482587,482692..482839,482912..483100,483280..483463,483530..483603,483686..484085,484156..484286,484371..484501,484595..484723,484815..484979,485062..485187,485262..485353,485433..485553))	Acanthamoeba castellanii str. Neff	14919003
ACA1_370280	CDS	ACA1_370280	NW_004457466.1	486101	487137	D	encoded by transcript ACA1_370280A; ribosomal protein S9, putative	join(486101..486208,486281..486764,486838..486918,487046..487137)	Acanthamoeba castellanii str. Neff	14919004
ACA1_370290	CDS	ACA1_370290	NW_004457466.1	487753	488874	R	encoded by transcript ACA1_370290A; small GTPase RAC, putative	complement(join(487753..487881,488046..488180,488293..488402,488612..488756,488857..488874))	Acanthamoeba castellanii str. Neff	14919005
ACA1_370300	CDS	ACA1_370300	NW_004457466.1	489296	491428	R	encoded by transcript ACA1_370300A; uncharacterized protein	complement(join(489296..489361,489447..489520,489591..489711,489780..490213,490275..490379,490457..490504,490579..490668,490744..490881,490982..491066,491173..491259,491420..491428))	Acanthamoeba castellanii str. Neff	14919006
ACA1_370310	CDS	ACA1_370310	NW_004457466.1	491700	497508	D	encoded by transcript ACA1_370310A; uncharacterized protein	join(491700..492345,492357..492414,492487..492695,492791..492868,492939..492992,493081..493182,493254..493316,493397..493469,493545..493635,493702..493734,493815..493897,493987..494115,494210..494354,494378..494418,494432..494512,494613..494704,494809..494946,495035..495236,495284..495426,495537..495633,495717..495847,495876..495905,495918..496002,496115..496245,496324..496688,496797..496850,496991..497064,497142..497250,497365..497508)	Acanthamoeba castellanii str. Neff	14919007
ACA1_370320	CDS	ACA1_370320	NW_004457466.1	497646	498603	D	encoded by transcript ACA1_370320A; CUE domain containing protein	join(497646..497966,498078..498197,498310..498603)	Acanthamoeba castellanii str. Neff	14919008
ACA1_370330	CDS	ACA1_370330	NW_004457466.1	498664	503752	R	encoded by transcript ACA1_370330A; protein kinase domain containing protein	complement(join(498664..499636,499705..500041,500714..501066,501080..501353,501368..502007,502049..502123,502138..502299,502315..502482,502591..502980,503015..503533,503645..503752))	Acanthamoeba castellanii str. Neff	14919009
ACA1_370440	CDS	ACA1_370440	NW_004457466.1	500234	500545	D	encoded by transcript ACA1_370440A; uncharacterized protein	500234..500545	Acanthamoeba castellanii str. Neff	14919010
ACA1_370550	CDS	ACA1_370550	NW_004457466.1	503887	504495	D	encoded by transcript ACA1_370550A; uncharacterized protein	503887..504495	Acanthamoeba castellanii str. Neff	14919012
ACA1_370660	CDS	ACA1_370660	NW_004457466.1	506212	506819	R	encoded by transcript ACA1_370660A; uncharacterized protein	complement(join(506212..506648,506717..506819))	Acanthamoeba castellanii str. Neff	14919011
ACA1_370670	CDS	ACA1_370670	NW_004457466.1	508091	508730	D	encoded by transcript ACA1_370670A; uncharacterized protein	join(508091..508446,508464..508590,508692..508730)	Acanthamoeba castellanii str. Neff	14919013
ACA1_370780	CDS	ACA1_370780	NW_004457466.1	512220	512660	D	encoded by transcript ACA1_370780A; uncharacterized protein	512220..512660	Acanthamoeba castellanii str. Neff	14919014
ACA1_370790	CDS	ACA1_370790	NW_004457466.1	513545	513784	R	encoded by transcript ACA1_370790A; uncharacterized protein	complement(513545..513784)	Acanthamoeba castellanii str. Neff	14919015
ACA1_370800	CDS	ACA1_370800	NW_004457466.1	513845	514123	R	encoded by transcript ACA1_370800A; uncharacterized protein	complement(513845..514123)	Acanthamoeba castellanii str. Neff	14919016
ACA1_370910	CDS	ACA1_370910	NW_004457466.1	514541	515354	D	encoded by transcript ACA1_370910A; uncharacterized protein	join(514541..514708,514779..514835,515142..515240,515322..515354)	Acanthamoeba castellanii str. Neff	14919017
ACA1_370920	CDS	ACA1_370920	NW_004457466.1	515495	516305	D	encoded by transcript ACA1_370920A; uncharacterized protein	join(515495..515612,515735..515873,516218..516305)	Acanthamoeba castellanii str. Neff	14919018
ACA1_370930	CDS	ACA1_370930	NW_004457466.1	518450	518965	R	encoded by transcript ACA1_370930A; uncharacterized protein	complement(join(518450..518631,518869..518965))	Acanthamoeba castellanii str. Neff	14919019
ACA1_370940	CDS	ACA1_370940	NW_004457466.1	519246	519540	R	encoded by transcript ACA1_370940A; uncharacterized protein	complement(join(519246..519393,519410..519540))	Acanthamoeba castellanii str. Neff	14919020
ACA1_371060	CDS	ACA1_371060	NW_004457466.1	520623	521458	R	encoded by transcript ACA1_371060A; uncharacterized protein	complement(join(520623..520640,521090..521458))	Acanthamoeba castellanii str. Neff	14919022
ACA1_371070	CDS	ACA1_371070	NW_004457466.1	522888	523625	D	encoded by transcript ACA1_371070A; uncharacterized protein	join(522888..523077,523114..523265,523434..523625)	Acanthamoeba castellanii str. Neff	14919023
ACA1_371180	CDS	ACA1_371180	NW_004457466.1	528631	528882	R	encoded by transcript ACA1_371180A; uncharacterized protein	complement(528631..528882)	Acanthamoeba castellanii str. Neff	14919024
ACA1_371190	CDS	ACA1_371190	NW_004457466.1	528981	529697	D	encoded by transcript ACA1_371190A; uncharacterized protein	join(528981..529304,529572..529697)	Acanthamoeba castellanii str. Neff	14918934
ACA1_371200	CDS	ACA1_371200	NW_004457466.1	529772	530379	D	encoded by transcript ACA1_371200A; uncharacterized protein	join(529772..530272,530290..530379)	Acanthamoeba castellanii str. Neff	14918935
ACA1_371210	CDS	ACA1_371210	NW_004457466.1	530481	530888	R	encoded by transcript ACA1_371210A; uncharacterized protein	complement(join(530481..530583,530653..530888))	Acanthamoeba castellanii str. Neff	14918936
ACA1_371220	CDS	ACA1_371220	NW_004457466.1	530970	531200	R	encoded by transcript ACA1_371220A; uncharacterized protein	complement(530970..531200)	Acanthamoeba castellanii str. Neff	14918937
ACA1_371230	CDS	ACA1_371230	NW_004457466.1	531266	531797	R	encoded by transcript ACA1_371230A; uncharacterized protein	complement(join(531266..531503,531679..531797))	Acanthamoeba castellanii str. Neff	14918938
ACA1_371240	CDS	ACA1_371240	NW_004457466.1	532056	532235	D	encoded by transcript ACA1_371240A; uncharacterized protein	532056..532235	Acanthamoeba castellanii str. Neff	14918939
ACA1_371250	CDS	ACA1_371250	NW_004457466.1	532960	533373	R	encoded by transcript ACA1_371250A; uncharacterized protein	complement(join(532960..533154,533260..533373))	Acanthamoeba castellanii str. Neff	14918940
ACA1_371260	CDS	ACA1_371260	NW_004457466.1	533449	534052	D	encoded by transcript ACA1_371260A; uncharacterized protein	join(533449..533766,533912..534052)	Acanthamoeba castellanii str. Neff	14918941
ACA1_371270	CDS	ACA1_371270	NW_004457466.1	534163	534639	R	encoded by transcript ACA1_371270A; thioredoxin domain containing protein	complement(534163..534639)	Acanthamoeba castellanii str. Neff	14918942
ACA1_371280	CDS	ACA1_371280	NW_004457466.1	534691	535283	R	encoded by transcript ACA1_371280A; uncharacterized protein	complement(join(534691..534933,534954..535283))	Acanthamoeba castellanii str. Neff	14918943
ACA1_371290	CDS	ACA1_371290	NW_004457466.1	535411	535934	D	encoded by transcript ACA1_371290A; uncharacterized protein	join(535411..535670,535709..535934)	Acanthamoeba castellanii str. Neff	14918944
ACA1_371300	CDS	ACA1_371300	NW_004457466.1	537913	538408	D	encoded by transcript ACA1_371300A; ankyrin 2,3/unc44, putative	join(537913..538229,538267..538408)	Acanthamoeba castellanii str. Neff	14918945
ACA1_371310	CDS	ACA1_371310	NW_004457466.1	538389	540703	R	encoded by transcript ACA1_371310A; 3,4dihydroxy-2-butanone-4-phosphate synthase	complement(join(538389..538760,538848..539423,539517..540046,540199..540703))	Acanthamoeba castellanii str. Neff	14918946
ACA1_371320	CDS	ACA1_371320	NW_004457466.1	541205	546318	R	encoded by transcript ACA1_371320A; [2Fe2S]-binding, putative	complement(join(541205..541333,541404..541464,541552..541691,541781..541916,542002..542083,542152..542240,542325..542425,542503..542580,542658..542794,542862..542981,543057..543618,543736..543794,543864..544044,544130..544220,544319..544386,544502..544573,544658..544895,544967..545088,545192..545645,545782..545852,545916..546018,546089..546318))	Acanthamoeba castellanii str. Neff	14918947
ACA1_371330	CDS	ACA1_371330	NW_004457466.1	546287	547626	D	encoded by transcript ACA1_371330A; 5-amino-6-(5-phosphoribosylamino)uracil reductase	join(546287..546355,546606..546645,546720..546864,546958..547164,547233..>547626)	Acanthamoeba castellanii str. Neff	14918948
ACA1_371440	CDS	ACA1_371440	NW_004457466.1	547782	548698	R	encoded by transcript ACA1_371440A; uncharacterized protein	complement(join(547782..547818,547955..548166,548291..548422,548585..548698))	Acanthamoeba castellanii str. Neff	14918950
ACA1_371450	CDS	ACA1_371450	NW_004457466.1	551656	552531	D	encoded by transcript ACA1_371450A; K+ channel tetramerization subfamily protein	join(551656..552095,552213..552531)	Acanthamoeba castellanii str. Neff	14918949
ACA1_371460	CDS	ACA1_371460	NW_004457466.1	552630	554383	R	encoded by transcript ACA1_371460A; [2Fe2S]-binding, putative	complement(join(552630..552756,552879..552931,553117..553274,553341..553494,553551..553640,553723..553835,553923..554127,554240..554383))	Acanthamoeba castellanii str. Neff	14918951
ACA1_371570	CDS	ACA1_371570	NW_004457466.1	554610	555099	D	encoded by transcript ACA1_371570A; CUE domain containing protein	join(554610..554892,555014..555099)	Acanthamoeba castellanii str. Neff	14918952
ACA1_371590	CDS	ACA1_371590	NW_004457466.1	557377	558417	R	encoded by transcript ACA1_371590A; CRAL/TRIO domain containing protein	complement(join(557377..557502,557564..557689,557799..557895,557999..558210,558349..558417))	Acanthamoeba castellanii str. Neff	14918954
ACA1_371610	CDS	ACA1_371610	NW_004457466.1	559713	562112	R	encoded by transcript ACA1_371610A; uncharacterized protein	complement(join(559713..559839,559954..560017,560081..560171,560280..560396,560516..560585,560705..560872,560887..560936,560965..561161,561420..561610,561679..561829,561926..562112))	Acanthamoeba castellanii str. Neff	14918956
ACA1_371620	CDS	ACA1_371620	NW_004457466.1	562477	565948	R	encoded by transcript ACA1_371620A; Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase	complement(join(562477..563892,564140..564275,564372..564606,564948..565024,565125..565257,565401..565591,565651..565762,565843..565948))	Acanthamoeba castellanii str. Neff	14918957
ACA1_371630	CDS	ACA1_371630	NW_004457466.1	566297	567142	D	encoded by transcript ACA1_371630A; uncharacterized protein	join(566297..566364,566462..566677,566767..567142)	Acanthamoeba castellanii str. Neff	14918958
ACA1_371640	CDS	ACA1_371640	NW_004457466.1	567313	570154	D	encoded by transcript ACA1_371640A; amidohydrolase superfamily protein	join(567313..567426,567508..567568,567646..567764,567844..568002,568089..568211,568311..568421,568513..568634,568839..568936,569032..569183,569320..569538,569579..569628,569736..569893,569976..570154)	Acanthamoeba castellanii str. Neff	14918959
ACA1_371660	CDS	ACA1_371660	NW_004457466.1	570755	572342	D	encoded by transcript ACA1_371660A; 3-ketodihydrosphingosine reductase	join(570755..570875,570940..571027,571147..571275,571405..571551,571667..571828,571901..572082,572170..572342)	Acanthamoeba castellanii str. Neff	14918961
ACA1_371670	CDS	ACA1_371670	NW_004457466.1	572522	575992	R	encoded by transcript ACA1_371670A; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase	complement(join(572522..572686,572844..572994,573060..573259,573369..573468,573523..573662,573756..573874,573950..574031,574098..574195,574272..574365,574497..574873,575022..575301,575360..575758,575774..575992))	Acanthamoeba castellanii str. Neff	14918962
ACA1_371680	CDS	ACA1_371680	NW_004457466.1	576259	577839	R	encoded by transcript ACA1_371680A; BAR domain containing protein	complement(join(576259..576882,576960..577079,577173..577349,577434..577564,577638..577839))	Acanthamoeba castellanii str. Neff	14918963
ACA1_371700	CDS	ACA1_371700	NW_004457466.1	581874	586357	R	encoded by transcript ACA1_371700A; Ubiquitin carboxylterminal hydrolase	complement(join(581874..582510,582591..582676,582770..583054,583118..583165,583266..583300,583434..583620,583762..583957,584069..584166,584260..584407,584502..584659,584753..584794,584866..585048,585142..585217,585288..585573,585720..585804,585928..586002,586111..586194,586286..586357))	Acanthamoeba castellanii str. Neff	14918866
ACA1_371710	CDS	ACA1_371710	NW_004457466.1	586649	588087	R	encoded by transcript ACA1_371710A; Fbox domain containing protein	complement(join(586649..586749,586830..586920,586999..587073,587160..587255,587329..587403,587474..587791,587908..588087))	Acanthamoeba castellanii str. Neff	14918867
ACA1_371730	CDS	ACA1_371730	NW_004457466.1	594807	596282	D	encoded by transcript ACA1_371730A; protein kinase domain containing protein	join(594807..595914,596002..596282)	Acanthamoeba castellanii str. Neff	14918869
ACA1_371740	CDS	ACA1_371740	NW_004457466.1	596762	598835	R	encoded by transcript ACA1_371740A; uncharacterized protein	complement(join(596762..596958,597047..597164,597223..597618,597731..597876,597989..598085,598200..598375,598489..598597,598707..598835))	Acanthamoeba castellanii str. Neff	14918870
ACA1_371750	CDS	ACA1_371750	NW_004457466.1	599112	599527	D	encoded by transcript ACA1_371750A; uncharacterized protein	join(599112..599158,599335..599527)	Acanthamoeba castellanii str. Neff	14918871
ACA1_371760	CDS	ACA1_371760	NW_004457466.1	600198	601351	R	encoded by transcript ACA1_371760A; uncharacterized protein	complement(join(600198..600447,600612..600622,600731..600814,600922..601021,601162..601229,601304..601351))	Acanthamoeba castellanii str. Neff	14918872
ACA1_371770	CDS	ACA1_371770	NW_004457466.1	602001	603209	R	encoded by transcript ACA1_371770A; coenzyme Q4like protein isoform 1, putative	complement(join(602001..602136,602399..602527,602619..602729,602824..603209))	Acanthamoeba castellanii str. Neff	14918873
ACA1_371780	CDS	ACA1_371780	NW_004457466.1	603456	603746	D	encoded by transcript ACA1_371780A; uncharacterized protein	603456..603746	Acanthamoeba castellanii str. Neff	14918874
ACA1_371900	CDS	ACA1_371900	NW_004457466.1	608804	609797	R	encoded by transcript ACA1_371900A; EF hand domain containing protein	complement(join(608804..609040,609126..609221,609300..609455,609568..609647,609704..609797))	Acanthamoeba castellanii str. Neff	14918876
ACA1_372020	CDS	ACA1_372020	NW_004457466.1	614722	616324	R	encoded by transcript ACA1_372020A; MORN repeatcontaining protein	complement(join(614722..615143,615239..615500,615608..616324))	Acanthamoeba castellanii str. Neff	14918878
ACA1_372030	CDS	ACA1_372030	NW_004457466.1	617109	617333	D	encoded by transcript ACA1_372030A; swarming motility protein ybia, putative	617109..617333	Acanthamoeba castellanii str. Neff	14918879
ACA1_372040	CDS	ACA1_372040	NW_004457466.1	617442	620376	R	encoded by transcript ACA1_372040A; fungal Zn(2)-Cys(6) binuclear cluster domain containing protein	complement(join(617442..617898,617987..618028,618124..618284,618475..618598,618696..619773,620058..620376))	Acanthamoeba castellanii str. Neff	14918880
ACA1_372050	CDS	ACA1_372050	NW_004457466.1	620795	622840	D	encoded by transcript ACA1_372050A; UBX domain containing protein	join(620795..620898,621096..621230,621360..621469,621676..621818,621947..622066,622173..622308,622418..622550,622643..622734,622800..622840)	Acanthamoeba castellanii str. Neff	14918881
ACA1_372060	CDS	ACA1_372060	NW_004457466.1	622976	624484	R	encoded by transcript ACA1_372060A; oxidoreductase	complement(join(622976..623350,623476..623722,623796..623941,624024..624148,624218..624290,624377..624484))	Acanthamoeba castellanii str. Neff	14918882
ACA1_372070	CDS	ACA1_372070	NW_004457466.1	624904	626371	R	encoded by transcript ACA1_372070A; hepatocellular carcinomaassociated antigen 59, putative	complement(join(624904..625094,625204..625310,625420..625540,625611..625747,625843..625977,626072..626146,626208..626371))	Acanthamoeba castellanii str. Neff	14918883
ACA1_372100	CDS	ACA1_372100	NW_004457466.1	632239	634614	D	encoded by transcript ACA1_372100A; cytochrome p450 superfamily protein	join(632239..632319,632424..632531,632600..632710,632810..632953,633025..633109,633191..633303,633389..633424,633456..633589,633666..633747,633830..633930,634003..634084,634195..634380,634465..634614)	Acanthamoeba castellanii str. Neff	14918886
ACA1_372110	CDS	ACA1_372110	NW_004457466.1	635238	636025	D	encoded by transcript ACA1_372110A; uncharacterized protein	join(635238..635269,635293..635500,635572..635673,635741..635850,635929..636025)	Acanthamoeba castellanii str. Neff	14918887
ACA1_372220	CDS	ACA1_372220	NW_004457466.1	640963	642280	D	encoded by transcript ACA1_372220A; deubiquinating enzyme, putative	join(640963..640969,641065..641191,641275..641348,641410..641493,641578..641759,641829..641862,641939..642036,642146..642280)	Acanthamoeba castellanii str. Neff	14918888
ACA1_372230	CDS	ACA1_372230	NW_004457466.1	642864	644220	R	encoded by transcript ACA1_372230A; Porphyromonastype peptidyl-arginine deiminase subfamily protein	complement(join(642864..643430,643539..643964,644023..644220))	Acanthamoeba castellanii str. Neff	14918889
ACA1_161190	CDS	ACA1_161190	NW_004457464.1	2107	2829	R	encoded by transcript ACA1_161190A; uncharacterized protein	complement(<2107..2829)	Acanthamoeba castellanii str. Neff	14918813
ACA1_161300	CDS	ACA1_161300	NW_004457464.1	3792	6716	D	encoded by transcript ACA1_161300A; uncharacterized protein	join(3792..3930,4109..4255,4375..4476,6631..6716)	Acanthamoeba castellanii str. Neff	14918838
ACA1_161410	CDS	ACA1_161410	NW_004457464.1	7418	10048	D	encoded by transcript ACA1_161410A; SPT2 chromatin protein	join(7418..7621,9654..9859,9931..10048)	Acanthamoeba castellanii str. Neff	14918839
ACA1_161520	CDS	ACA1_161520	NW_004457464.1	10166	13821	R	encoded by transcript ACA1_161520A; protein kinase domain containing protein	complement(join(10166..10810,10834..11310,11408..11545,11676..11846,11955..12041,12132..12284,12401..12544,13261..13503,13693..13821))	Acanthamoeba castellanii str. Neff	14918840
ACA1_161630	CDS	ACA1_161630	NW_004457464.1	14183	16034	R	encoded by transcript ACA1_161630A; LIM domain containing protein	complement(join(14183..14297,14414..14589,14684..14775,14854..15648,15760..15907,15999..16034))	Acanthamoeba castellanii str. Neff	14918841
ACA1_161750	CDS	ACA1_161750	NW_004457464.1	19587	20851	R	encoded by transcript ACA1_161750A; uncharacterized protein	complement(join(19587..19681,19748..19838,19941..20030,20184..20239,20321..20414,20513..20851))	Acanthamoeba castellanii str. Neff	14918843
ACA1_161760	CDS	ACA1_161760	NW_004457464.1	21022	22277	R	encoded by transcript ACA1_161760A; uncharacterized protein	complement(join(21022..21252,21349..21505,21715..22277))	Acanthamoeba castellanii str. Neff	14918844
ACA1_161870	CDS	ACA1_161870	NW_004457464.1	22448	24070	R	encoded by transcript ACA1_161870A; peptidyl-prolyl cis-trans isomerase, FKBP-type domain containing protein	complement(join(<22448..22683,22761..22915,23034..23172,23255..23341,23420..23530,23568..23704,23783..23893,23974..24070))	Acanthamoeba castellanii str. Neff	14918814
ACA1_161880	CDS	ACA1_161880	NW_004457464.1	24374	25224	D	encoded by transcript ACA1_161880A; actinbinding protein fragmin P, putative	join(24374..24478,24585..24707,24805..24870,24964..25224)	Acanthamoeba castellanii str. Neff	14918815
ACA1_161990	CDS	ACA1_161990	NW_004457464.1	26146	27443	D	encoded by transcript ACA1_161990A; inorganic anion transporter, sulfate permease (SulP) subfamily protein	join(26146..26322,26394..26592,26654..26846,26911..27141,27221..27443)	Acanthamoeba castellanii str. Neff	14918816
ACA1_162000	CDS	ACA1_162000	NW_004457464.1	27955	28846	D	encoded by transcript ACA1_162000A; phosphoribosyltransferase	join(27955..28003,28085..28202,28255..28377,28429..28560,28714..28846)	Acanthamoeba castellanii str. Neff	14918817
ACA1_162110	CDS	ACA1_162110	NW_004457464.1	30461	30893	D	encoded by transcript ACA1_162110A; uncharacterized protein	join(30461..30647,30724..30893)	Acanthamoeba castellanii str. Neff	14918818
ACA1_162120	CDS	ACA1_162120	NW_004457464.1	31097	35789	D	encoded by transcript ACA1_162120A; uncharacterized protein	join(31097..31246,31282..31332,31512..31935,32211..32272,32408..33211,33361..33495,33597..33650,33740..33923,34035..34797,34919..34976,35076..35789)	Acanthamoeba castellanii str. Neff	14918819
ACA1_162230	CDS	ACA1_162230	NW_004457464.1	35975	38365	D	encoded by transcript ACA1_162230A; ankyrin 2,3/unc44, putative	join(35975..36295,36416..36514,36608..36724,36869..36941,37037..37231,37355..37552,37637..37734,37837..37982,38101..38365)	Acanthamoeba castellanii str. Neff	14918820
ACA1_162240	CDS	ACA1_162240	NW_004457464.1	38616	38846	R	encoded by transcript ACA1_162240A; peptidyl-prolyl cis-trans isomerase, parvulin-type, putative	complement(38616..38846)	Acanthamoeba castellanii str. Neff	14918821
ACA1_162350	CDS	ACA1_162350	NW_004457464.1	40634	41550	D	encoded by transcript ACA1_162350A; uncharacterized protein	join(40634..41152,41251..41550)	Acanthamoeba castellanii str. Neff	14918822
ACA1_162360	CDS	ACA1_162360	NW_004457464.1	41694	42619	D	encoded by transcript ACA1_162360A; uncharacterized protein	join(41694..41812,41965..42619)	Acanthamoeba castellanii str. Neff	14918823
ACA1_162370	CDS	ACA1_162370	NW_004457464.1	42725	44577	R	encoded by transcript ACA1_162370A; mitogen-activated protein kinase kinase kinase	complement(join(42725..42852,42930..43032,43116..43208,43288..43408,43557..43576,43765..43855,43976..44577))	Acanthamoeba castellanii str. Neff	14918824
ACA1_162380	CDS	ACA1_162380	NW_004457464.1	45165	45690	D	encoded by transcript ACA1_162380A; uncharacterized protein	join(45165..45285,45394..45447,45539..45690)	Acanthamoeba castellanii str. Neff	14918825
ACA1_162490	CDS	ACA1_162490	NW_004457464.1	45998	48864	D	encoded by transcript ACA1_162490A; uncharacterized protein	join(45998..46082,46207..46327,46428..46618,46672..46742,46823..46899,47010..47109,47201..47320,47383..47457,47588..47662,47764..47859,47954..48038,48125..48286,48360..48440,48540..48655,48736..48864)	Acanthamoeba castellanii str. Neff	14918826
ACA1_162500	CDS	ACA1_162500	NW_004457464.1	49049	49678	R	encoded by transcript ACA1_162500A; 31.5 kDa midgut protein	complement(join(49049..49146,49244..49376,49451..49678))	Acanthamoeba castellanii str. Neff	14918827
ACA1_162510	CDS	ACA1_162510	NW_004457464.1	50188	53749	D	encoded by transcript ACA1_162510A; Frizzled/Smoothened family membrane region protein	join(50188..50369,50544..50586,50733..50844,50963..51018,51119..51269,51397..51665,51833..51916,51979..52054,52127..52197,52330..52413,52498..52579,52695..52756,52827..52965,53036..53096,53191..53365,53501..53586,53683..53749)	Acanthamoeba castellanii str. Neff	14918828
ACA1_162520	CDS	ACA1_162520	NW_004457464.1	53886	54332	R	encoded by transcript ACA1_162520A; uncharacterized protein	complement(53886..54332)	Acanthamoeba castellanii str. Neff	14918829
ACA1_162530	CDS	ACA1_162530	NW_004457464.1	54669	58275	R	encoded by transcript ACA1_162530A; uncharacterized protein	complement(join(54669..55327,55585..55741,55864..56078,56401..56544,56614..56671,56851..57114,57256..57382,57505..57703,57925..57997,58222..58275))	Acanthamoeba castellanii str. Neff	14918830
ACA1_162540	CDS	ACA1_162540	NW_004457464.1	59055	59675	R	encoded by transcript ACA1_162540A; uncharacterized protein	complement(join(59055..59065,59153..59675))	Acanthamoeba castellanii str. Neff	14918831
ACA1_162550	CDS	ACA1_162550	NW_004457464.1	59789	61863	R	encoded by transcript ACA1_162550A; regulator of chromosome condensation (RCC1) repeat-containing protein	complement(join(59789..59915,59996..60099,60211..60395,60488..60609,60687..60802,61138..61259,61380..61483,61553..61654,61751..61863))	Acanthamoeba castellanii str. Neff	14918832
ACA1_162660	CDS	ACA1_162660	NW_004457464.1	63155	63531	D	encoded by transcript ACA1_162660A; uncharacterized protein	join(63155..63181,63313..63531)	Acanthamoeba castellanii str. Neff	14918833
ACA1_162670	CDS	ACA1_162670	NW_004457464.1	63717	64567	R	encoded by transcript ACA1_162670A; EF hand domain containing protein	complement(join(63717..63874,63959..64105,64201..64305,64414..64567))	Acanthamoeba castellanii str. Neff	14918834
ACA1_162780	CDS	ACA1_162780	NW_004457464.1	69753	70597	R	encoded by transcript ACA1_162780A; ankyrin repeat domain 50, putative	complement(join(<69753..69795,69880..69971,70038..70146,70238..70311,70506..70597))	Acanthamoeba castellanii str. Neff	14918835
ACA1_162890	CDS	ACA1_162890	NW_004457464.1	75567	76868	D	encoded by transcript ACA1_162890A; tdiRNAhydrouridine synthase	join(75567..75638,75735..75803,75926..76002,76091..76180,76288..76449,76553..76664,76773..76868)	Acanthamoeba castellanii str. Neff	14918836
ACA1_163110	CDS	ACA1_163110	NW_004457464.1	83917	85532	R	encoded by transcript ACA1_163110A; uncharacterized protein	complement(join(83917..84011,84100..84183,84284..84431,84509..84595,84693..84778,84942..84982,85060..85131,85284..85419,85490..85532))	Acanthamoeba castellanii str. Neff	14918802
ACA1_163130	CDS	ACA1_163130	NW_004457464.1	87149	88045	R	encoded by transcript ACA1_163130A; eukaryotic initiation factor, putative	complement(87149..88045)	Acanthamoeba castellanii str. Neff	14918804
ACA1_163140	CDS	ACA1_163140	NW_004457464.1	88336	89384	D	encoded by transcript ACA1_163140A; micropain, putative	join(88336..88426,88577..88829,88945..89103,89198..89384)	Acanthamoeba castellanii str. Neff	14918805
ACA1_163150	CDS	ACA1_163150	NW_004457464.1	89656	91879	D	encoded by transcript ACA1_163150A; HIT zinc finger protein	join(89656..89933,90076..90148,90250..90384,90514..90571,90665..90790,90854..91064,91135..91234,91378..91440,91514..91879)	Acanthamoeba castellanii str. Neff	14918806
ACA1_163160	CDS	ACA1_163160	NW_004457464.1	91892	94319	R	encoded by transcript ACA1_163160A; ankyrin repeat-containing protein	complement(join(91892..92095,92185..92409,92529..92804,92960..93189,93299..93400,93499..94030,94143..94319))	Acanthamoeba castellanii str. Neff	14918807
ACA1_163170	CDS	ACA1_163170	NW_004457464.1	95618	97376	R	encoded by transcript ACA1_163170A; actin, putative	complement(join(95618..96430,96562..96889,96962..97177,97188..97266,97346..97376))	Acanthamoeba castellanii str. Neff	14918808
ACA1_163180	CDS	ACA1_163180	NW_004457464.1	97412	97926	R	encoded by transcript ACA1_163180A; uncharacterized protein	complement(join(97412..97557,97617..97773,97837..97926))	Acanthamoeba castellanii str. Neff	14918809
ACA1_163190	CDS	ACA1_163190	NW_004457464.1	98106	99634	R	encoded by transcript ACA1_163190A; uncharacterized protein	complement(join(98106..98150,98240..98391,98495..98578,98694..98818,98922..99224,99405..99634))	Acanthamoeba castellanii str. Neff	14918810
ACA1_163200	CDS	ACA1_163200	NW_004457464.1	99948	100574	R	encoded by transcript ACA1_163200A; uncharacterized protein	complement(join(99948..100060,100160..100328,100461..100574))	Acanthamoeba castellanii str. Neff	14918811
ACA1_163210	CDS	ACA1_163210	NW_004457464.1	101177	101995	D	encoded by transcript ACA1_163210A; uncharacterized protein	join(101177..101396,101465..101554,101664..101796,101899..101995)	Acanthamoeba castellanii str. Neff	14918812
ACA1_083530	CDS	ACA1_083530	NW_004457462.1	116	1192	R	encoded by transcript ACA1_083530A; uncharacterized protein	complement(join(<116..203,283..469,553..657,760..920,999..>1192))	Acanthamoeba castellanii str. Neff	14918801
ACA1_083640	CDS	ACA1_083640	NW_004457462.1	6735	8808	R	encoded by transcript ACA1_083640A; elongation factor 1alpha	complement(join(<6735..7207,7312..7366,7441..7550,7684..7780,7875..7975,8106..8246,8317..8374,8464..8700,8764..8808))	Acanthamoeba castellanii str. Neff	14918794
ACA1_083660	CDS	ACA1_083660	NW_004457462.1	11178	11453	D	encoded by transcript ACA1_083660A; ankyrin repeat-containing protein	11178..11453	Acanthamoeba castellanii str. Neff	14918796
ACA1_083770	CDS	ACA1_083770	NW_004457462.1	12729	13302	D	encoded by transcript ACA1_083770A; uncharacterized protein	join(12729..12812,13032..13192,13209..13302)	Acanthamoeba castellanii str. Neff	14918797
ACA1_083780	CDS	ACA1_083780	NW_004457462.1	13886	14161	D	encoded by transcript ACA1_083780A; ankyrin repeat-containing protein	13886..14161	Acanthamoeba castellanii str. Neff	14918798
ACA1_083890	CDS	ACA1_083890	NW_004457462.1	15902	18195	D	encoded by transcript ACA1_083890A; uncharacterized protein	join(15902..16024,16098..16202,16288..16503,16593..16727,16815..16934,17020..17147,17226..17292,17371..17554,17630..17762,17889..17978,18159..18195)	Acanthamoeba castellanii str. Neff	14918799
ACA1_083900	CDS	ACA1_083900	NW_004457462.1	19003	23404	D	encoded by transcript ACA1_083900A; 5'3' exoribonuclease, putative	join(19003..19100,19162..19236,19323..19432,19523..19816,19885..20000,20090..20177,20263..20381,20481..20575,20670..21775,21870..21933,22011..22126,22197..22397,22476..22861,22905..23228,23243..23404)	Acanthamoeba castellanii str. Neff	14918800
ACA1_083910	CDS	ACA1_083910	NW_004457462.1	23876	26036	D	encoded by transcript ACA1_083910A; Fbox domain containing protein	join(23876..23991,24083..24312,24440..24555,24669..24706,24850..25018,25210..25342,25430..25617,25701..25807,25904..26036)	Acanthamoeba castellanii str. Neff	14918790
ACA1_083920	CDS	ACA1_083920	NW_004457462.1	26216	26901	R	encoded by transcript ACA1_083920A; uncharacterized protein	complement(join(26216..26293,26360..26617,26680..26901))	Acanthamoeba castellanii str. Neff	14918791
ACA1_083930	CDS	ACA1_083930	NW_004457462.1	27308	28972	R	encoded by transcript ACA1_083930A; uncharacterized protein	complement(join(27308..28101,28163..28633,28730..28809,28923..28972))	Acanthamoeba castellanii str. Neff	14918792
ACA1_083940	CDS	ACA1_083940	NW_004457462.1	29950	30483	R	encoded by transcript ACA1_083940A; uncharacterized protein	complement(join(29950..29985,30085..30285,30361..>30483))	Acanthamoeba castellanii str. Neff	14918793
ACA1_102320	CDS	ACA1_102320	NW_004457460.1	459	754	R	encoded by transcript ACA1_102320A; uncharacterized protein	complement(join(459..602,650..754))	Acanthamoeba castellanii str. Neff	14918789
ACA1_102330	CDS	ACA1_102330	NW_004457460.1	1122	1401	D	encoded by transcript ACA1_102330A; uncharacterized protein	join(1122..1316,1338..>1401)	Acanthamoeba castellanii str. Neff	14918784
ACA1_102450	CDS	ACA1_102450	NW_004457460.1	7304	8731	R	encoded by transcript ACA1_102450A; uncharacterized protein	complement(join(7304..8523,8617..8731))	Acanthamoeba castellanii str. Neff	14918785
ACA1_102460	CDS	ACA1_102460	NW_004457460.1	9159	10637	D	encoded by transcript ACA1_102460A; kelch repeat-containing protein	9159..10637	Acanthamoeba castellanii str. Neff	14918786
ACA1_102470	CDS	ACA1_102470	NW_004457460.1	11481	12147	R	encoded by transcript ACA1_102470A; uncharacterized protein	complement(join(11481..11863,11938..12064,12103..12147))	Acanthamoeba castellanii str. Neff	14918787
ACA1_102480	CDS	ACA1_102480	NW_004457460.1	14738	18775	R	encoded by transcript ACA1_102480A; RhoGEF domain containing protein	complement(join(14738..14806,15156..15221,15316..15408,15534..15617,15750..15857,15975..16114,16207..16348,16454..16543,16622..16707,16832..16967,17078..17137,17228..17539,17624..17806,17949..18085,18151..18775))	Acanthamoeba castellanii str. Neff	14918782
ACA1_102790	CDS	ACA1_102790	NW_004457460.1	28192	28884	R	encoded by transcript ACA1_102790A; uncharacterized protein	complement(join(28192..28296,28370..28449,28538..28662,28751..28884))	Acanthamoeba castellanii str. Neff	14918783
ACA1_315590	CDS	ACA1_315590	NW_004457458.1	27	1837	R	encoded by transcript ACA1_315590A; uncharacterized protein	complement(join(27..196,325..414,580..1054,1158..1409,1505..1596,1705..1837))	Acanthamoeba castellanii str. Neff	14918781
ACA1_315600	CDS	ACA1_315600	NW_004457458.1	2039	3795	R	encoded by transcript ACA1_315600A; uncharacterized protein	complement(join(2039..2164,2261..3529,3611..3645,3750..3795))	Acanthamoeba castellanii str. Neff	14918776
ACA1_315610	CDS	ACA1_315610	NW_004457458.1	4172	4783	D	encoded by transcript ACA1_315610A; uncharacterized protein	join(4172..4241,4320..4783)	Acanthamoeba castellanii str. Neff	14918777
ACA1_315620	CDS	ACA1_315620	NW_004457458.1	4871	6908	R	encoded by transcript ACA1_315620A; ankyrin, putative	complement(join(4871..5075,5168..5322,5411..5548,5662..5861,6091..6225,6293..6397,6516..6753,6876..6908))	Acanthamoeba castellanii str. Neff	14918778
ACA1_315630	CDS	ACA1_315630	NW_004457458.1	7829	9784	R	encoded by transcript ACA1_315630A; oxidoreductase, zincbinding dehydrogenase superfamily protein	complement(join(7829..7924,8024..8143,8239..8298,8440..8656,8743..8860,9004..9120,9202..9274,9377..9448,9611..9784))	Acanthamoeba castellanii str. Neff	14918779
ACA1_315640	CDS	ACA1_315640	NW_004457458.1	10223	10851	D	encoded by transcript ACA1_315640A; Aldehyde dehydrogenase, putative	join(10223..10508,10583..>10851)	Acanthamoeba castellanii str. Neff	14918780
ACA1_327110	CDS	ACA1_327110	NW_004457456.1	1906	2313	D	encoded by transcript ACA1_327110A; uncharacterized protein	1906..2313	Acanthamoeba castellanii str. Neff	14918772
ACA1_327230	CDS	ACA1_327230	NW_004457456.1	3700	8607	D	encoded by transcript ACA1_327230A; DNA gyrase/topoisomerase IV, A subunit	join(3700..3839,3921..4060,4076..4176,4203..4327,4409..4605,4681..4839,4921..5051,5134..5215,5292..5397,5468..5735,5841..5972,6057..6215,6293..6440,6531..7039,7133..7213,7328..7521,7592..7782,7839..8053,8148..8323,8448..8607)	Acanthamoeba castellanii str. Neff	14918769
ACA1_327240	CDS	ACA1_327240	NW_004457456.1	8692	9275	D	encoded by transcript ACA1_327240A; typeII DNA topoisomerase	join(8692..8806,8877..9066,9161..9275)	Acanthamoeba castellanii str. Neff	14918770
ACA1_327250	CDS	ACA1_327250	NW_004457456.1	9513	11814	D	encoded by transcript ACA1_327250A; RCC1 repeat protein	join(9513..10713,11033..11814)	Acanthamoeba castellanii str. Neff	14918771
ACA1_327260	CDS	ACA1_327260	NW_004457456.1	11938	12495	R	encoded by transcript ACA1_327260A; uncharacterized protein	complement(join(11938..12302,12335..12375,12416..12495))	Acanthamoeba castellanii str. Neff	14918773
ACA1_327270	CDS	ACA1_327270	NW_004457456.1	12807	13666	D	encoded by transcript ACA1_327270A; glycosyl transferase, putative	join(12807..12845,12934..13000,13085..13194,13264..13323,13389..13505,13535..13666)	Acanthamoeba castellanii str. Neff	14918774
ACA1_206310	CDS	ACA1_206310	NW_004457453.1	33	1772	D	encoded by transcript ACA1_206310A; glycosyltransferase family 17 protein	join(33..128,271..406,502..672,801..906,1058..1171,1263..1425,1566..1772)	Acanthamoeba castellanii str. Neff	14918689
ACA1_206320	CDS	ACA1_206320	NW_004457453.1	1970	6458	R	encoded by transcript ACA1_206320A; RasGEF domain containing protein	complement(join(1970..2455,2534..2854,2960..3052,3122..3211,3285..3390,3478..3611,3721..3893,4002..4131,4228..4616,4674..4806,4881..5273,5355..5431,5537..5559,5728..6458))	Acanthamoeba castellanii str. Neff	14918690
ACA1_206330	CDS	ACA1_206330	NW_004457453.1	7924	11235	D	encoded by transcript ACA1_206330A; IBR domain containing protein	join(7924..8166,8254..8489,8549..8624,8725..8822,8902..9017,9082..9133,9208..9412,9508..9647,9738..9885,9982..10107,10191..10254,10333..10473,10574..11235)	Acanthamoeba castellanii str. Neff	14918691
ACA1_206340	CDS	ACA1_206340	NW_004457453.1	11680	14147	D	encoded by transcript ACA1_206340A; cellulase (glycosyl hydrolase family 5) subfamily protein	join(11680..11829,11939..11969,12058..12197,12264..12362,12445..12776,12842..13379,13459..13903,13999..14147)	Acanthamoeba castellanii str. Neff	14918679
ACA1_206350	CDS	ACA1_206350	NW_004457453.1	14280	14684	D	encoded by transcript ACA1_206350A; uncharacterized protein	join(14280..14460,14548..14684)	Acanthamoeba castellanii str. Neff	14918680
ACA1_206360	CDS	ACA1_206360	NW_004457453.1	14807	16091	D	encoded by transcript ACA1_206360A; DnaJ domain containing protein	join(14807..15236,15308..15644,15713..16091)	Acanthamoeba castellanii str. Neff	14918681
ACA1_206370	CDS	ACA1_206370	NW_004457453.1	16415	17783	D	encoded by transcript ACA1_206370A; molybdenum cofactor sulfuraselike protein 1, putative	join(16415..16645,16735..16916,16952..16966,16978..17105,17178..17262,17335..17397,17472..17638,17713..17783)	Acanthamoeba castellanii str. Neff	14918682
ACA1_206380	CDS	ACA1_206380	NW_004457453.1	17878	18996	D	encoded by transcript ACA1_206380A; uncharacterized protein	join(17878..18025,18090..18232,18316..18427,18526..18748,18810..18996)	Acanthamoeba castellanii str. Neff	14918683
ACA1_206390	CDS	ACA1_206390	NW_004457453.1	19102	20126	R	encoded by transcript ACA1_206390A; uncharacterized protein	complement(join(19102..19128,19145..19177,19401..19883,20016..20126))	Acanthamoeba castellanii str. Neff	14918684
ACA1_206500	CDS	ACA1_206500	NW_004457453.1	20455	20986	D	encoded by transcript ACA1_206500A; uncharacterized protein	join(20455..20493,20597..20715,20794..20986)	Acanthamoeba castellanii str. Neff	14918685
ACA1_206510	CDS	ACA1_206510	NW_004457453.1	21285	21589	D	encoded by transcript ACA1_206510A; uncharacterized protein	join(21285..21352,21442..21589)	Acanthamoeba castellanii str. Neff	14918686
ACA1_206620	CDS	ACA1_206620	NW_004457453.1	23785	26054	D	encoded by transcript ACA1_206620A; MCM8 protein	join(23785..23968,24048..24149,24209..24367,24435..24609,24692..24821,24908..24950,25054..25192,25301..25397,25486..25563,25641..25811,25923..26054)	Acanthamoeba castellanii str. Neff	14918687
ACA1_206630	CDS	ACA1_206630	NW_004457453.1	26274	27368	R	encoded by transcript ACA1_206630A; uncharacterized protein	complement(26274..27368)	Acanthamoeba castellanii str. Neff	14918688
ACA1_206740	CDS	ACA1_206740	NW_004457453.1	27769	28279	D	encoded by transcript ACA1_206740A; uncharacterized protein	join(27769..27779,27830..27936,28014..28279)	Acanthamoeba castellanii str. Neff	14918637
ACA1_206750	CDS	ACA1_206750	NW_004457453.1	28337	29701	R	encoded by transcript ACA1_206750A; uncharacterized protein	complement(28337..29701)	Acanthamoeba castellanii str. Neff	14918638
ACA1_206760	CDS	ACA1_206760	NW_004457453.1	30125	35589	D	encoded by transcript ACA1_206760A; M protein repeat domain containing protein	join(30125..30793,30896..31165,31198..31908,32205..32286,32363..32584,32681..33083,33156..33694,33802..34971,35047..35114,35208..35469,35543..35589)	Acanthamoeba castellanii str. Neff	14918639
ACA1_206870	CDS	ACA1_206870	NW_004457453.1	35805	36541	R	encoded by transcript ACA1_206870A; uncharacterized protein	complement(join(35805..36050,36130..36258,36356..36541))	Acanthamoeba castellanii str. Neff	14918640
ACA1_206980	CDS	ACA1_206980	NW_004457453.1	40228	40995	R	encoded by transcript ACA1_206980A; uncharacterized protein	complement(join(<40228..40634,40779..>40995))	Acanthamoeba castellanii str. Neff	14918641
ACA1_207090	CDS	ACA1_207090	NW_004457453.1	43850	44676	D	encoded by transcript ACA1_207090A; uncharacterized protein	join(43850..43984,43996..>44676)	Acanthamoeba castellanii str. Neff	14918642
ACA1_207200	CDS	ACA1_207200	NW_004457453.1	50205	51821	D	encoded by transcript ACA1_207200A; Poly(ADPribose) polymerase, regulatory subfamily protein	join(50205..50389,50509..50626,50785..50901,51020..51120,51247..51374,51480..51562,51801..51821)	Acanthamoeba castellanii str. Neff	14918643
ACA1_207310	CDS	ACA1_207310	NW_004457453.1	51939	52106	R	encoded by transcript ACA1_207310A; uncharacterized protein	complement(51939..52106)	Acanthamoeba castellanii str. Neff	14918644
ACA1_207320	CDS	ACA1_207320	NW_004457453.1	52632	54195	D	encoded by transcript ACA1_207320A; diacylglycerol oacyltransferase	join(52632..52794,52951..53111,53183..53303,53400..53528,53598..53768,53858..54195)	Acanthamoeba castellanii str. Neff	14918645
ACA1_207330	CDS	ACA1_207330	NW_004457453.1	54438	55443	R	encoded by transcript ACA1_207330A; HAD family hydrolase	complement(join(54438..54656,54763..54864,55002..55142,55252..55443))	Acanthamoeba castellanii str. Neff	14918646
ACA1_207340	CDS	ACA1_207340	NW_004457453.1	55870	57241	D	encoded by transcript ACA1_207340A; syntaxinlike t-SNARE protein TLG2, putative	join(55870..55966,56110..56213,56331..56404,56524..56589,56712..56870,56971..57241)	Acanthamoeba castellanii str. Neff	14918647
ACA1_207350	CDS	ACA1_207350	NW_004457453.1	57356	59637	R	encoded by transcript ACA1_207350A; BTB/POZ domain containing protein	complement(join(57356..57517,57638..57784,57880..58009,58118..58206,58282..58421,58481..58610,58745..58888,59007..59285,59397..59519,59608..59637))	Acanthamoeba castellanii str. Neff	14918648
ACA1_207360	CDS	ACA1_207360	NW_004457453.1	60138	62549	R	encoded by transcript ACA1_207360A; HBS1like, putative	complement(join(60138..60403,60508..60643,60743..60838,60896..61053,61163..61352,61450..61641,61680..62061,62132..62336,62474..>62549))	Acanthamoeba castellanii str. Neff	14918649
ACA1_207470	CDS	ACA1_207470	NW_004457453.1	64698	66871	D	encoded by transcript ACA1_207470A; Sec1 family domain containing protein	join(64698..64838,64917..65055,65168..65208,65233..65410,65579..65663,65726..65909,66026..66201,66318..66690,66767..66871)	Acanthamoeba castellanii str. Neff	14918650
ACA1_207480	CDS	ACA1_207480	NW_004457453.1	67584	68349	R	encoded by transcript ACA1_207480A; exported protein, putative	complement(join(67584..67730,67813..67970,68049..68349))	Acanthamoeba castellanii str. Neff	14918651
ACA1_207490	CDS	ACA1_207490	NW_004457453.1	68904	71934	R	encoded by transcript ACA1_207490A; WD domain, Gbeta repeat, domain containing protein	complement(join(68904..68911,68967..69049,69154..69301,69401..69513,69624..69688,69716..69799,69842..69893,69966..70033,70119..70182,70533..70696,70809..70932,70950..70981,71110..71316,71403..71567,71647..71742,71821..71934))	Acanthamoeba castellanii str. Neff	14918652
ACA1_207500	CDS	ACA1_207500	NW_004457453.1	72419	74041	R	encoded by transcript ACA1_207500A; uncharacterized protein	complement(join(72419..72940,73004..73371,73445..73696,73787..73846,74005..74041))	Acanthamoeba castellanii str. Neff	14918653
ACA1_207510	CDS	ACA1_207510	NW_004457453.1	74365	78005	D	encoded by transcript ACA1_207510A; uncharacterized protein	join(74365..74594,74711..74800,74911..75112,75188..75325,75413..75574,76663..76914,77115..77252,77346..77564,77649..77813,77937..78005)	Acanthamoeba castellanii str. Neff	14918746
ACA1_207820	CDS	ACA1_207820	NW_004457453.1	79781	80674	D	encoded by transcript ACA1_207820A; fatty acid elongase	79781..80674	Acanthamoeba castellanii str. Neff	14918747
ACA1_207830	CDS	ACA1_207830	NW_004457453.1	81278	83115	D	encoded by transcript ACA1_207830A; uncharacterized protein	join(81278..81524,81768..81895,81975..82133,82257..82497,82708..82913,83038..83115)	Acanthamoeba castellanii str. Neff	14918748
ACA1_207940	CDS	ACA1_207940	NW_004457453.1	84053	90385	D	encoded by transcript ACA1_207940A; TBC domain containing protein	join(84053..84094,84184..84322,84450..84643,84755..85076,85158..85279,85397..85519,85646..85906,86011..86187,86287..86782,86862..87908,88017..88473,88564..90385)	Acanthamoeba castellanii str. Neff	14918749
ACA1_207950	CDS	ACA1_207950	NW_004457453.1	91585	91906	R	encoded by transcript ACA1_207950A; uncharacterized protein	complement(join(91585..91757,91798..91906))	Acanthamoeba castellanii str. Neff	14918750
ACA1_207960	CDS	ACA1_207960	NW_004457453.1	92993	93445	R	encoded by transcript ACA1_207960A; uncharacterized protein	complement(join(92993..93178,93383..93445))	Acanthamoeba castellanii str. Neff	14918751
ACA1_207970	CDS	ACA1_207970	NW_004457453.1	93824	95490	R	encoded by transcript ACA1_207970A; Myblike DNA-binding domain containing protein	complement(join(93824..94027,94104..94310,94419..94547,94631..94688,94734..95053,95147..95325,95418..95490))	Acanthamoeba castellanii str. Neff	14918752
ACA1_208080	CDS	ACA1_208080	NW_004457453.1	96018	96754	R	encoded by transcript ACA1_208080A; uncharacterized protein	complement(join(96018..96036,96142..96544,96676..96754))	Acanthamoeba castellanii str. Neff	14918753
ACA1_208090	CDS	ACA1_208090	NW_004457453.1	97108	100066	R	encoded by transcript ACA1_208090A; DnaJ domain containing protein	complement(join(97108..97311,97400..97606,97711..97839,97905..97962,98008..98327,98435..98613,98697..99083,99179..99271,99377..99661,99910..100066))	Acanthamoeba castellanii str. Neff	14918754
ACA1_208100	CDS	ACA1_208100	NW_004457453.1	100575	102426	D	encoded by transcript ACA1_208100A; uncharacterized protein	join(100575..100678,100805..101353,101428..101787,101901..102426)	Acanthamoeba castellanii str. Neff	14918755
ACA1_208110	CDS	ACA1_208110	NW_004457453.1	102994	107861	D	encoded by transcript ACA1_208110A; phosphoinositide 3kinase family, accessory domain (pik domain) domain containing protein	join(102994..103119,103242..103376,103461..103733,103797..103910,103992..104141,104192..104351,104452..104751,104865..105130,105223..105445,105543..105734,105832..106022,106140..106352,106449..106529,106606..106766,106872..106926,107022..107861)	Acanthamoeba castellanii str. Neff	14918756
ACA1_208120	CDS	ACA1_208120	NW_004457453.1	108010	109245	D	encoded by transcript ACA1_208120A; uncharacterized protein	join(108010..108039,108132..108404,108537..108615,108644..109245)	Acanthamoeba castellanii str. Neff	14918757
ACA1_208130	CDS	ACA1_208130	NW_004457453.1	109462	112591	R	encoded by transcript ACA1_208130A; calponin domain containing protein	complement(join(109462..109480,109574..109639,109719..109871,109962..110165,110285..110913,110996..111097,111211..111291,111353..111433,111553..111622,111706..111872,111955..112041,112110..112230,112386..112591))	Acanthamoeba castellanii str. Neff	14918758
ACA1_208140	CDS	ACA1_208140	NW_004457453.1	112985	114126	R	encoded by transcript ACA1_208140A; ER lumen proteinretaining receptor-like protein	complement(join(112985..113072,113266..113556,113786..113957,114036..114126))	Acanthamoeba castellanii str. Neff	14918759
ACA1_208150	CDS	ACA1_208150	NW_004457453.1	114998	116049	D	encoded by transcript ACA1_208150A; uncharacterized protein	join(114998..115084,115184..115282,115451..115767,115881..116049)	Acanthamoeba castellanii str. Neff	14918760
ACA1_208170	CDS	ACA1_208170	NW_004457453.1	117100	118707	D	encoded by transcript ACA1_208170A; uncharacterized protein	join(117100..117268,117351..117608,117691..117779,117869..117964,118045..118107,118207..118435,118529..118707)	Acanthamoeba castellanii str. Neff	14918762
ACA1_208180	CDS	ACA1_208180	NW_004457453.1	119261	123471	D	encoded by transcript ACA1_208180A; villin headpiece domain containing protein	join(119261..119460,119586..119703,119813..120089,120171..120844,120879..122132,122216..122455,122538..123027,123146..123228,123358..123471)	Acanthamoeba castellanii str. Neff	14918763
ACA1_208190	CDS	ACA1_208190	NW_004457453.1	124815	125318	R	encoded by transcript ACA1_208190A; uncharacterized protein	complement(124815..125318)	Acanthamoeba castellanii str. Neff	14918764
ACA1_208200	CDS	ACA1_208200	NW_004457453.1	125576	127395	R	encoded by transcript ACA1_208200A; uncharacterized protein	complement(join(125576..125836,126015..126163,126290..126371,126514..126859,126947..127035,127192..127395))	Acanthamoeba castellanii str. Neff	14918765
ACA1_208210	CDS	ACA1_208210	NW_004457453.1	127841	129233	R	encoded by transcript ACA1_208210A; GIYYIG catalytic domain containing protein	complement(join(127841..128008,128084..128250,128334..128433,128526..128595,128677..128755,128849..128931,129007..129233))	Acanthamoeba castellanii str. Neff	14918766
ACA1_208220	CDS	ACA1_208220	NW_004457453.1	129498	133099	D	encoded by transcript ACA1_208220A; SAC3/GANP family protein	join(<129498..129586,129695..129841,129949..130079,130166..130241,130355..130618,130734..130835,130915..131043,131144..131228,131366..131500,131594..131662,131691..131942,132049..132185,132301..132424,132899..133099)	Acanthamoeba castellanii str. Neff	14918767
ACA1_208230	CDS	ACA1_208230	NW_004457453.1	133365	139959	D	encoded by transcript ACA1_208230A; uncharacterized protein	join(133365..133797,133891..133995,134129..134291,134428..134534,134655..134787,134910..135030,135097..135168,135282..135404,135572..135688,135782..135979,136141..136427,136512..136618,136743..136924,137008..137283,137405..137485,137614..137913,137999..138559,138634..138746,138812..138945,139055..139146,139266..139338,139475..139572,139696..139959)	Acanthamoeba castellanii str. Neff	14918692
ACA1_208240	CDS	ACA1_208240	NW_004457453.1	140562	142192	R	encoded by transcript ACA1_208240A; aminotransferase, class IV superfamily protein	complement(join(140562..140675,140733..140812,140910..141023,141093..141185,141281..141338,141442..141542,141643..141718,141836..141923,142056..142192))	Acanthamoeba castellanii str. Neff	14918693
ACA1_208250	CDS	ACA1_208250	NW_004457453.1	144032	145398	R	encoded by transcript ACA1_208250A; phosducin subfamily protein	complement(join(144032..144082,144161..144240,144427..144544,144680..144770,144866..145003,145151..145398))	Acanthamoeba castellanii str. Neff	14918694
ACA1_208260	CDS	ACA1_208260	NW_004457453.1	145505	149262	R	encoded by transcript ACA1_208260A; acylCoA dehydrogenase, middle domain containing protein	complement(join(145505..145582,145704..145861,145986..146141,146261..146361,146404..146578,146674..146862,146947..147033,147093..147194,147281..147433,147527..147653,147750..147895,147962..148106,148227..148304,148406..148493,148648..148718,148791..148931,149029..149262))	Acanthamoeba castellanii str. Neff	14918695
ACA1_208270	CDS	ACA1_208270	NW_004457453.1	149792	150464	R	encoded by transcript ACA1_208270A; NADH dehydrogenase, putative	complement(join(149792..149864,150033..150201,150395..150464))	Acanthamoeba castellanii str. Neff	14918696
ACA1_208280	CDS	ACA1_208280	NW_004457453.1	150587	151751	D	encoded by transcript ACA1_208280A; uncharacterized protein	join(150587..150695,150776..150925,151064..151184,151274..151381,151457..151751)	Acanthamoeba castellanii str. Neff	14918697
ACA1_208290	CDS	ACA1_208290	NW_004457453.1	151835	153841	R	encoded by transcript ACA1_208290A; protein phosphatase 2C domain containing protein	complement(join(151835..151968,152024..152161,152264..152388,152484..152591,152679..152979,153118..153841))	Acanthamoeba castellanii str. Neff	14918698
ACA1_208300	CDS	ACA1_208300	NW_004457453.1	154338	156419	R	encoded by transcript ACA1_208300A; uncharacterized protein	complement(join(154338..154447,154575..154685,154836..154917,154991..155110,155174..155403,155496..155662,155771..155933,156047..156419))	Acanthamoeba castellanii str. Neff	14918699
ACA1_208310	CDS	ACA1_208310	NW_004457453.1	156683	158976	R	encoded by transcript ACA1_208310A; LBP / BPI / CETP family, Cterminal domain containing protein	complement(join(156683..156889,156972..157037,157127..157329,157407..157485,157511..157651,157745..157897,158001..158038,158173..158327,158526..158727,158865..158976))	Acanthamoeba castellanii str. Neff	14918700
ACA1_208320	CDS	ACA1_208320	NW_004457453.1	159215	161723	R	encoded by transcript ACA1_208320A; ADPribosylglycohydrolase superfamily protein	complement(join(159215..159529,159633..159699,159769..159917,159983..160066,160190..160282,160340..160709,160801..160885,160964..161025,161087..161168,161245..161382,161486..161723))	Acanthamoeba castellanii str. Neff	14918701
ACA1_208330	CDS	ACA1_208330	NW_004457453.1	161924	165392	R	encoded by transcript ACA1_208330A; actin subfamily protein	complement(join(161924..162106,162188..162295,162411..162506,162605..162790,162918..163190,163278..163385,163463..163540,163647..163781,163900..163998,164161..164260,164337..164532,164643..164751,164908..165065,165353..165392))	Acanthamoeba castellanii str. Neff	14918702
ACA1_208340	CDS	ACA1_208340	NW_004457453.1	165491	165837	R	encoded by transcript ACA1_208340A; uncharacterized protein	complement(join(165491..165546,165627..165774,165817..165837))	Acanthamoeba castellanii str. Neff	14918703
ACA1_208350	CDS	ACA1_208350	NW_004457453.1	166024	168905	R	encoded by transcript ACA1_208350A; PRP1 splicing factor, Nterminal/tetratricopeptide repeat domain containing protein	complement(join(166024..168758,168800..168905))	Acanthamoeba castellanii str. Neff	14918704
ACA1_208360	CDS	ACA1_208360	NW_004457453.1	169185	171208	D	encoded by transcript ACA1_208360A; uncharacterized protein	join(169185..169253,169638..169746,169802..169865,170057..171073,171166..171208)	Acanthamoeba castellanii str. Neff	14918705
ACA1_208370	CDS	ACA1_208370	NW_004457453.1	171378	174024	D	encoded by transcript ACA1_208370A; serine/threonineprotein kinase, putative	join(171378..171523,171848..171953,172142..172257,172495..172585,172681..172948,173033..173220,173338..173694,173775..173895,173984..174024)	Acanthamoeba castellanii str. Neff	14918706
ACA1_208380	CDS	ACA1_208380	NW_004457453.1	174629	176245	D	encoded by transcript ACA1_208380A; Longevityassurance protein (LAG1) domain containing protein	join(174629..174814,174896..175102,175210..175334,175442..175597,175716..175854,175940..176113,176210..176245)	Acanthamoeba castellanii str. Neff	14918707
ACA1_208390	CDS	ACA1_208390	NW_004457453.1	177025	178024	D	encoded by transcript ACA1_208390A; EF hand domain containing protein	join(177025..177271,177365..177433,177638..177753,177833..178024)	Acanthamoeba castellanii str. Neff	14918708
ACA1_208400	CDS	ACA1_208400	NW_004457453.1	178222	183032	D	encoded by transcript ACA1_208400A; minichromosomal maintenance factor, putative	join(178222..178358,178427..178481,178587..178752,178859..179218,179318..179427,179525..179777,179916..180206,180385..180485,180582..180660,180789..180948,181037..181162,181271..181393,181501..181573,181708..181821,181899..182039,182177..182256,182413..182512,182664..182801,182916..183032)	Acanthamoeba castellanii str. Neff	14918709
ACA1_208410	CDS	ACA1_208410	NW_004457453.1	183330	186420	R	encoded by transcript ACA1_208410A; uncharacterized protein	complement(join(183330..183551,183650..183762,183867..184010,184082..184193,184266..184324,184406..184568,184692..184757,184838..184993,185103..185183,185284..185496,185648..185774,186221..186420))	Acanthamoeba castellanii str. Neff	14918710
ACA1_208420	CDS	ACA1_208420	NW_004457453.1	187143	189681	R	encoded by transcript ACA1_208420A; Fbox domain containing protein	complement(join(187143..187335,187445..187628,187755..187832,187952..188080,188221..188373,188420..188496,188534..188660,188751..188894,189021..189213,189404..189512,189611..189681))	Acanthamoeba castellanii str. Neff	14918711
ACA1_208430	CDS	ACA1_208430	NW_004457453.1	189769	192283	D	encoded by transcript ACA1_208430A; uncharacterized protein	join(189769..189819,189938..189993,190172..190256,190366..191078,191176..192283)	Acanthamoeba castellanii str. Neff	14918654
ACA1_208440	CDS	ACA1_208440	NW_004457453.1	192469	194317	R	encoded by transcript ACA1_208440A; QaSNARE, SYP3/Sed5p/Syntaxin 5-type, putative	complement(join(192469..192606,192695..192772,192880..193008,193123..193177,193324..193436,193575..193751,193947..194017,194116..194317))	Acanthamoeba castellanii str. Neff	14918655
ACA1_208450	CDS	ACA1_208450	NW_004457453.1	194839	196228	R	encoded by transcript ACA1_208450A; uncharacterized protein	complement(join(194839..195197,195290..195469,195552..195911,196030..196228))	Acanthamoeba castellanii str. Neff	14918656
ACA1_208460	CDS	ACA1_208460	NW_004457453.1	196987	199132	R	encoded by transcript ACA1_208460A; abhydrolase associated lipase	complement(join(196987..197296,197368..197549,197687..197801,197911..198057,198175..198318,198448..198658,198757..198886,198995..199132))	Acanthamoeba castellanii str. Neff	14918657
ACA1_208470	CDS	ACA1_208470	NW_004457453.1	199859	203211	D	encoded by transcript ACA1_208470A; uncharacterized protein	join(199859..200334,200482..200617,200863..200917,201033..201164,201245..201319,201452..201578,201680..201792,201935..202059,202180..202274,202361..202458,202620..202675,202854..202941,203063..203211)	Acanthamoeba castellanii str. Neff	14918658
ACA1_208480	CDS	ACA1_208480	NW_004457453.1	204166	207432	D	encoded by transcript ACA1_208480A; uncharacterized protein	join(204166..204597,204636..204710,204940..205602,205699..205885,205964..206115,206201..206273,206387..206527,206623..206711,206797..207033,207313..207432)	Acanthamoeba castellanii str. Neff	14918659
ACA1_208490	CDS	ACA1_208490	NW_004457453.1	207803	209001	D	encoded by transcript ACA1_208490A; Hypothetical protein	join(207803..208367,208445..209001)	Acanthamoeba castellanii str. Neff	14918660
ACA1_208500	CDS	ACA1_208500	NW_004457453.1	209115	212030	D	encoded by transcript ACA1_208500A; aldehyde dehydrogenase (NAD) family protein	join(209115..209184,209227..209447,209522..209612,209740..209979,210118..210179,210291..210486,210572..210631,210711..210829,210929..211190,211258..211369,211466..211520,211616..211713,211818..211902,211979..>212030)	Acanthamoeba castellanii str. Neff	14918661
ACA1_208510	CDS	ACA1_208510	NW_004457453.1	214100	214644	R	encoded by transcript ACA1_208510A; uncharacterized protein	complement(join(214100..214480,214564..214644))	Acanthamoeba castellanii str. Neff	14918662
ACA1_208530	CDS	ACA1_208530	NW_004457453.1	215623	216444	R	encoded by transcript ACA1_208530A; uncharacterized protein	complement(join(215623..215812,215942..216215,216360..>216444))	Acanthamoeba castellanii str. Neff	14918664
ACA1_208540	CDS	ACA1_208540	NW_004457453.1	217811	219298	D	encoded by transcript ACA1_208540A; uncharacterized protein	217811..219298	Acanthamoeba castellanii str. Neff	14918665
ACA1_208550	CDS	ACA1_208550	NW_004457453.1	219373	220668	R	encoded by transcript ACA1_208550A; PAS domain Sbox domain containing protein	complement(join(219373..219474,219583..219668,219784..219957,220164..220439,220596..220668))	Acanthamoeba castellanii str. Neff	14918666
ACA1_208570	CDS	ACA1_208570	NW_004457453.1	224309	226115	D	encoded by transcript ACA1_208570A; transporter, major facilitator subfamily protein	join(224309..224668,224920..225010,225141..225318,225427..225741,225836..226115)	Acanthamoeba castellanii str. Neff	14918668
ACA1_208580	CDS	ACA1_208580	NW_004457453.1	226365	229289	R	encoded by transcript ACA1_208580A; GPI anchored protein	complement(join(226365..226524,226594..226673,226779..226897,227000..227116,227207..227240,227331..227435,227527..227635,227757..227842,227905..228036,228142..228249,228466..228524,228598..228725,228837..228969,229187..229289))	Acanthamoeba castellanii str. Neff	14918669
ACA1_208600	CDS	ACA1_208600	NW_004457453.1	235774	237125	D	encoded by transcript ACA1_208600A; hydrolase, alpha/beta fold domain containing protein	join(235774..235827,235925..236030,236111..236221,236309..236496,236583..236708,236799..237125)	Acanthamoeba castellanii str. Neff	14918671
ACA1_208610	CDS	ACA1_208610	NW_004457453.1	237211	239189	D	encoded by transcript ACA1_208610A; uncharacterized protein	join(237211..237337,237404..237535,237660..237797,237887..237996,238061..238132,238205..238348,238429..238524,238608..238723,238774..238930,239097..239189)	Acanthamoeba castellanii str. Neff	14918672
ACA1_208620	CDS	ACA1_208620	NW_004457453.1	239985	244646	D	encoded by transcript ACA1_208620A; Extracellular ligandbinding receptor, putative	join(239985..240354,240558..240642,240722..240890,241026..241142,241232..241316,241453..241529,241640..241711,241802..241893,242028..242150,242243..242303,242403..242541,242664..242791,242877..242940,243018..243424,243525..243618,243720..244038,244140..244259,244363..244412,244501..244646)	Acanthamoeba castellanii str. Neff	14918673
ACA1_208730	CDS	ACA1_208730	NW_004457453.1	246660	247182	R	encoded by transcript ACA1_208730A; carboxylesterase, type B family protein	complement(join(<246660..246907,246922..247182))	Acanthamoeba castellanii str. Neff	14918674
ACA1_208840	CDS	ACA1_208840	NW_004457453.1	250447	251649	R	encoded by transcript ACA1_208840A; carboxylic ester hydrolase	complement(join(250447..250452,250563..251066,251206..251649))	Acanthamoeba castellanii str. Neff	14918675
ACA1_208850	CDS	ACA1_208850	NW_004457453.1	252875	254733	R	encoded by transcript ACA1_208850A; carboxylesterase superfamily protein	complement(join(252875..252937,253084..253292,253411..253507,254290..254733))	Acanthamoeba castellanii str. Neff	14918676
ACA1_208960	CDS	ACA1_208960	NW_004457453.1	255833	259722	R	encoded by transcript ACA1_208960A; uncharacterized protein	complement(join(255833..255895,256012..256220,256344..256440,256549..256653,256771..256889,256970..257060,257208..257460,257601..257710,257845..258001,258146..258249,258326..258436,258544..258792,258880..258980,259092..259239,259540..259722))	Acanthamoeba castellanii str. Neff	14918677
ACA1_208970	CDS	ACA1_208970	NW_004457453.1	260895	262770	D	encoded by transcript ACA1_208970A; oxidoreductase like protein	join(260895..260929,260996..261102,261171..261293,261354..261459,261523..261987,262066..262283,262361..262770)	Acanthamoeba castellanii str. Neff	14918678
ACA1_208980	CDS	ACA1_208980	NW_004457453.1	263012	263670	D	encoded by transcript ACA1_208980A; uncharacterized protein	join(263012..263248,263323..263670)	Acanthamoeba castellanii str. Neff	14918712
ACA1_209100	CDS	ACA1_209100	NW_004457453.1	267612	272034	R	encoded by transcript ACA1_209100A; RasGEF domain containing protein	complement(join(267612..267743,267827..269788,269864..269998,270060..270317,270412..270492,270577..270644,270725..270850,270926..271051,271125..271334,271430..271497,271669..271724,271858..272034))	Acanthamoeba castellanii str. Neff	14918714
ACA1_209110	CDS	ACA1_209110	NW_004457453.1	272315	274106	D	encoded by transcript ACA1_209110A; uncharacterized protein	join(272315..272439,272521..272560,272629..272728,272819..272941,273077..273168,273248..273278,273361..273560,273649..273832,273991..274106)	Acanthamoeba castellanii str. Neff	14918715
ACA1_209120	CDS	ACA1_209120	NW_004457453.1	274796	278207	D	encoded by transcript ACA1_209120A; leucine rich repeat domain containing protein	join(274796..274872,274997..275132,275209..275353,275457..275829,275934..276070,276147..276196,276297..276405,276513..276606,276715..276798,276927..277015,277126..277247,277334..277520,277601..277674,277740..277811,277915..278012,278111..278207)	Acanthamoeba castellanii str. Neff	14918716
ACA1_209230	CDS	ACA1_209230	NW_004457453.1	280755	281482	D	encoded by transcript ACA1_209230A; SNARE domain containing protein	join(280755..280758,280847..280920,280974..281060,281184..281300,281366..281482)	Acanthamoeba castellanii str. Neff	14918717
ACA1_209240	CDS	ACA1_209240	NW_004457453.1	281665	282189	R	encoded by transcript ACA1_209240A; RNA recognition motif domain containing protein	complement(join(281665..282014,282096..282189))	Acanthamoeba castellanii str. Neff	14918718
ACA1_209250	CDS	ACA1_209250	NW_004457453.1	282871	284115	R	encoded by transcript ACA1_209250A; Hsp20/alpha crystallin superfamily protein	complement(282871..284115)	Acanthamoeba castellanii str. Neff	14918719
ACA1_209260	CDS	ACA1_209260	NW_004457453.1	284795	285749	R	encoded by transcript ACA1_209260A; Hsp20/alpha crystallin superfamily protein	complement(join(284795..285177,285253..285405,285488..285550,285599..285749))	Acanthamoeba castellanii str. Neff	14918720
ACA1_209370	CDS	ACA1_209370	NW_004457453.1	286382	286697	D	encoded by transcript ACA1_209370A; glutamine synthetase	join(286382..286484,286564..286697)	Acanthamoeba castellanii str. Neff	14918721
ACA1_209380	CDS	ACA1_209380	NW_004457453.1	288114	289736	D	encoded by transcript ACA1_209380A; uncharacterized protein	288114..289736	Acanthamoeba castellanii str. Neff	14918722
ACA1_209420	CDS	ACA1_209420	NW_004457453.1	298222	301467	D	encoded by transcript ACA1_209420A; uncharacterized protein	join(298222..298534,298625..298713,298819..298936,299035..299123,299261..299332,299509..299672,299737..299811,299925..300201,300317..300519,300617..300735,300811..300926,301079..301199,301283..301467)	Acanthamoeba castellanii str. Neff	14918726
ACA1_209530	CDS	ACA1_209530	NW_004457453.1	302273	304892	R	encoded by transcript ACA1_209530A; Ser/Thr phosphatase family superfamily protein	complement(join(302273..302452,302556..302714,302828..302907,302982..303079,303232..303389,303525..303618,303747..303998,304080..304173,304259..304439,304576..304753,304819..304892))	Acanthamoeba castellanii str. Neff	14918727
ACA1_209540	CDS	ACA1_209540	NW_004457453.1	307051	307314	D	encoded by transcript ACA1_209540A; uncharacterized protein	join(307051..307142,307170..307314)	Acanthamoeba castellanii str. Neff	14918728
ACA1_209650	CDS	ACA1_209650	NW_004457453.1	308605	308920	D	encoded by transcript ACA1_209650A; glutamine synthetase	join(308605..308707,308787..308920)	Acanthamoeba castellanii str. Neff	14918729
ACA1_209660	CDS	ACA1_209660	NW_004457453.1	309184	312175	D	encoded by transcript ACA1_209660A; uncharacterized protein	join(309184..309188,309569..309707,309875..309957,310026..310071,310568..312175)	Acanthamoeba castellanii str. Neff	14918730
ACA1_209770	CDS	ACA1_209770	NW_004457453.1	313119	314169	D	encoded by transcript ACA1_209770A; uncharacterized protein	join(313119..313141,313305..313404,313423..313619,313675..313883,314072..314169)	Acanthamoeba castellanii str. Neff	14918731
ACA1_209780	CDS	ACA1_209780	NW_004457453.1	314222	317725	R	encoded by transcript ACA1_209780A; glycogen debranching enzyme	complement(join(314222..314656,314740..314979,315059..315168,315270..315824,315907..315992,316068..316224,316351..316539,316615..316735,316789..316993,317078..317260,317342..317579,317605..317725))	Acanthamoeba castellanii str. Neff	14918732
ACA1_209790	CDS	ACA1_209790	NW_004457453.1	318295	323859	R	encoded by transcript ACA1_209790A; AMPbinding enzyme domain containing protein	complement(join(318295..319162,319273..319819,319933..320029,320113..321268,321349..321475,321549..321834,321907..321971,322032..322784,322876..323051,323206..323666,323731..323859))	Acanthamoeba castellanii str. Neff	14918733
ACA1_209800	CDS	ACA1_209800	NW_004457453.1	324745	325771	D	encoded by transcript ACA1_209800A; transcription initiation factor tfiid subunit a protein	join(324745..325230,325345..325487,325600..325771)	Acanthamoeba castellanii str. Neff	14918734
ACA1_209820	CDS	ACA1_209820	NW_004457453.1	332812	333971	R	encoded by transcript ACA1_209820A; uncharacterized protein	complement(join(332812..332910,333024..333083,333163..333216,333336..333971))	Acanthamoeba castellanii str. Neff	14918736
ACA1_209830	CDS	ACA1_209830	NW_004457453.1	334121	335539	R	encoded by transcript ACA1_209830A; prohibitin 2, putative	complement(join(334121..334190,334289..334544,334617..334671,334768..334884,334950..335084,335205..335320,335404..335539))	Acanthamoeba castellanii str. Neff	14918737
ACA1_209840	CDS	ACA1_209840	NW_004457453.1	335707	336672	D	encoded by transcript ACA1_209840A; uncharacterized protein	join(335707..335769,335822..336040,336115..336672)	Acanthamoeba castellanii str. Neff	14918738
ACA1_209850	CDS	ACA1_209850	NW_004457453.1	337346	338786	R	encoded by transcript ACA1_209850A; RhoGAP domain containing protein	complement(join(337346..337472,337569..337658,337791..337865,337957..338062,338154..338282,338429..338503,338651..338786))	Acanthamoeba castellanii str. Neff	14918739
ACA1_209860	CDS	ACA1_209860	NW_004457453.1	339018	341820	R	encoded by transcript ACA1_209860A; serinethreonine protein kinase, putative	complement(join(339018..339397,339516..339630,339719..339777,339899..339970,340105..340198,340286..340311,340397..340620,340753..340879,341032..341083,341226..341281,341375..341460,341564..341645,341772..341820))	Acanthamoeba castellanii str. Neff	14918740
ACA1_209870	CDS	ACA1_209870	NW_004457453.1	342604	344370	D	encoded by transcript ACA1_209870A; uncharacterized protein	342604..344370	Acanthamoeba castellanii str. Neff	14918741
ACA1_209890	CDS	ACA1_209890	NW_004457453.1	346546	356042	D	encoded by transcript ACA1_209890A; ROCO family protein kinase, putative	join(346546..346734,346811..347107,347268..347657,347751..348057,348149..348704,348792..348957,349028..349139,349214..349922,351819..354429,354563..354719,354802..355287,355388..355646,355780..355919,356020..356042)	Acanthamoeba castellanii str. Neff	14918743
ACA1_210100	CDS	ACA1_210100	NW_004457453.1	358658	361786	R	encoded by transcript ACA1_210100A; protein lmbr1l, putative	complement(join(358658..358855,359299..359418,359528..359625,359733..359835,359935..360129,360326..360414,360531..360645,360759..360967,361107..361246,361341..361368,361495..361576,361667..361786))	Acanthamoeba castellanii str. Neff	14918744
ACA1_210110	CDS	ACA1_210110	NW_004457453.1	361997	364425	R	encoded by transcript ACA1_210110A; Sad1 / UNClike C-terminal domain containing protein	complement(join(361997..362224,362309..362470,362593..363069,363148..363309,363384..363526,363656..363899,363969..364126,364197..364425))	Acanthamoeba castellanii str. Neff	14918745
ACA1_014490	CDS	ACA1_014490	NW_004457451.1	26	3983	D	encoded by transcript ACA1_014490A; protein kinase domain containing protein	join(<26..211,364..448,470..549,620..705,794..951,1099..1198,1280..1377,1491..1606,1715..1852,1960..2108,2246..2357,2439..2641,2727..2837,2957..3052,3133..3344,3424..3489,3621..3742,3858..3983)	Acanthamoeba castellanii str. Neff	14918636
ACA1_014500	CDS	ACA1_014500	NW_004457451.1	4221	5288	D	encoded by transcript ACA1_014500A; uncharacterized protein	4221..5288	Acanthamoeba castellanii str. Neff	14918634
ACA1_014510	CDS	ACA1_014510	NW_004457451.1	5939	9048	R	encoded by transcript ACA1_014510A; tetratricopeptide repeat domain containing protein	complement(join(5939..6061,6152..6268,6374..6487,6599..6710,6797..6905,6978..7142,7287..7466,7575..7714,7842..8012,8129..8231,8371..8447,8570..9048))	Acanthamoeba castellanii str. Neff	14918635
ACA1_014520	CDS	ACA1_014520	NW_004457451.1	9238	11760	R	encoded by transcript ACA1_014520A; uncharacterized protein	complement(join(9238..10817,10887..11138,11244..>11760))	Acanthamoeba castellanii str. Neff	14918633
ACA1_350700	CDS	ACA1_350700	NW_004457449.1	42	889	R	encoded by transcript ACA1_350700A; uncharacterized protein	complement(join(<42..368,385..765,884..889))	Acanthamoeba castellanii str. Neff	14918629
ACA1_350710	CDS	ACA1_350710	NW_004457449.1	1143	1959	D	encoded by transcript ACA1_350710A; acetyltransferase, GNAT superfamily protein	join(1143..1244,1361..1586,1675..1797,1865..1959)	Acanthamoeba castellanii str. Neff	14918628
ACA1_350820	CDS	ACA1_350820	NW_004457449.1	6167	8214	R	encoded by transcript ACA1_350820A; aspartate aminotransferase, putative	complement(join(6167..6449,6554..6719,6823..6934,7044..7187,7295..7407,7488..7605,7705..7836,7957..8214))	Acanthamoeba castellanii str. Neff	14918632
ACA1_350830	CDS	ACA1_350830	NW_004457449.1	8568	9535	R	encoded by transcript ACA1_350830A; leucine rich repeat domain containing protein	complement(join(8568..9195,9315..9535))	Acanthamoeba castellanii str. Neff	14918630
ACA1_350940	CDS	ACA1_350940	NW_004457449.1	15740	16009	D	encoded by transcript ACA1_350940A; uncharacterized protein	15740..>16009	Acanthamoeba castellanii str. Neff	14918631
ACA1_312880	CDS	ACA1_312880	NW_004457447.1	5252	6851	R	encoded by transcript ACA1_312880A; tetratricopeptide repeat domain containing protein	complement(join(<5252..5367,5451..5624,5702..5805,5884..6369,6439..6526,6587..6684,6751..>6851))	Acanthamoeba castellanii str. Neff	14918627
ACA1_313090	CDS	ACA1_313090	NW_004457447.1	14234	16495	R	encoded by transcript ACA1_313090A; SH2 domain containing protein	complement(join(14234..14335,14422..14493,14587..14659,14763..14904,14997..15072,15165..15310,15389..15429,15995..16159,16243..16307,16412..16495))	Acanthamoeba castellanii str. Neff	14918626
ACA1_308880	CDS	ACA1_308880	NW_004457446.1	51	1189	D	encoded by transcript ACA1_308880A; uncharacterized protein	join(51..526,604..1189)	Acanthamoeba castellanii str. Neff	14918625
ACA1_308990	CDS	ACA1_308990	NW_004457446.1	5367	6344	R	encoded by transcript ACA1_308990A; Sel1 repeatcontaining protein	complement(join(<5367..5633,5726..5856,5991..6071,6158..6288,6325..>6344))	Acanthamoeba castellanii str. Neff	14918624
ACA1_309100	CDS	ACA1_309100	NW_004457446.1	6514	7351	R	encoded by transcript ACA1_309100A; Sel1 domain containing protein	complement(join(6514..6668,6791..6899,7067..7351))	Acanthamoeba castellanii str. Neff	14918623
ACA1_247940	CDS	ACA1_247940	NW_004457445.1	575	974	D	encoded by transcript ACA1_247940A; uncharacterized protein	join(575..840,908..974)	Acanthamoeba castellanii str. Neff	14918592
ACA1_247950	CDS	ACA1_247950	NW_004457445.1	1461	1947	R	encoded by transcript ACA1_247950A; uncharacterized protein	complement(join(1461..1669,1750..1860,1938..1947))	Acanthamoeba castellanii str. Neff	14918560
ACA1_248060	CDS	ACA1_248060	NW_004457445.1	2532	4494	R	encoded by transcript ACA1_248060A; uncharacterized protein	complement(join(2532..2610,2682..2713,2970..3101,3163..3317,3414..4494))	Acanthamoeba castellanii str. Neff	14918619
ACA1_248070	CDS	ACA1_248070	NW_004457445.1	5743	6575	D	encoded by transcript ACA1_248070A; uncharacterized protein	join(5743..5954,6089..6205,6272..6575)	Acanthamoeba castellanii str. Neff	14918620
ACA1_248080	CDS	ACA1_248080	NW_004457445.1	8695	11535	R	encoded by transcript ACA1_248080A; betaglucosidase	complement(join(8695..8739,8903..9076,9346..9501,9635..9691,9769..9909,9986..10146,10249..10416,10509..10635,10736..10849,10941..11008,11077..11179,11298..11375,11461..11535))	Acanthamoeba castellanii str. Neff	14918621
ACA1_248190	CDS	ACA1_248190	NW_004457445.1	12102	23543	D	encoded by transcript ACA1_248190A; Beige/BEACH domain containing protein	join(12102..12223,12320..12478,12580..12708,12799..12910,12991..13166,13258..13348,13421..13552,13689..14013,14115..14336,14427..14571,14647..14847,14897..15458,15747..15809,15899..17271,17371..17498,17553..17700,17802..17912,17999..18141,18224..18747,18847..18967,19070..19530,19618..19900,19997..20236,20353..20417,20513..20586,20661..20783,20876..20939,21028..21184,21284..21399,21487..21564,21637..21851,22001..22326,22418..22807,22873..22959,23032..23543)	Acanthamoeba castellanii str. Neff	14918622
ACA1_248200	CDS	ACA1_248200	NW_004457445.1	23748	25381	D	encoded by transcript ACA1_248200A; phosphotransferase enzyme domain containing protein	join(23748..24176,24246..24344,24413..24521,24593..24859,24925..25037,25238..25381)	Acanthamoeba castellanii str. Neff	14918579
ACA1_248210	CDS	ACA1_248210	NW_004457445.1	25409	29703	R	encoded by transcript ACA1_248210A; xylosidase	complement(join(25409..25471,25548..25688,25767..25927,26037..26204,26293..26419,26503..26616,26706..26773,26856..26958,27052..27129,27231..27329,27410..27571,27669..27719,27826..27979,28064..28149,28233..28400,28524..28601,28667..28745,28866..28977,29071..29231,29316..29431,29530..29703))	Acanthamoeba castellanii str. Neff	14918580
ACA1_248220	CDS	ACA1_248220	NW_004457445.1	29851	34289	R	encoded by transcript ACA1_248220A; xylosidase	complement(join(29851..29913,29998..30138,30215..30375,30461..30628,30726..30852,30948..31061,31152..31219,31288..31390,31508..31585,31661..31759,31890..32051,32133..32187,32230..32418,32515..32600,32681..32845,32944..33021,33114..33192,33294..33405,33519..33679,33856..33971,34116..34289))	Acanthamoeba castellanii str. Neff	14918581
ACA1_248230	CDS	ACA1_248230	NW_004457445.1	34478	35506	R	encoded by transcript ACA1_248230A; ribonuclease P/MRP 30 subunit	complement(join(34478..34539,34611..34739,34839..34918,34999..35071,35268..35359,35436..35506))	Acanthamoeba castellanii str. Neff	14918582
ACA1_248340	CDS	ACA1_248340	NW_004457445.1	35740	36126	D	encoded by transcript ACA1_248340A; uncharacterized protein	35740..36126	Acanthamoeba castellanii str. Neff	14918583
ACA1_248350	CDS	ACA1_248350	NW_004457445.1	36476	36832	R	encoded by transcript ACA1_248350A; uncharacterized protein	complement(join(36476..36615,36688..36832))	Acanthamoeba castellanii str. Neff	14918584
ACA1_248360	CDS	ACA1_248360	NW_004457445.1	36953	43813	R	encoded by transcript ACA1_248360A; AMP deaminase	complement(join(36953..37138,37210..37325,37393..37522,37604..37668,37731..37966,38077..38347,38462..38642,38705..38817,38906..39062,39146..39253,39369..39467,39580..39674,39754..39888,39975..40026,40116..40252,40341..40420,40521..40629,40738..41057,41239..41349,41438..41575,41684..41742,41794..41816,41927..42075,42165..42364,42481..42585,42710..42807,42913..43064,43262..43328,43402..43519,43625..43813))	Acanthamoeba castellanii str. Neff	14918585
ACA1_248370	CDS	ACA1_248370	NW_004457445.1	44147	46869	D	encoded by transcript ACA1_248370A; uncharacterized protein	join(44147..44257,44342..44514,44537..44636,44683..44877,45029..45210,45314..45449,45561..45763,45850..46025,46123..46451,46675..46869)	Acanthamoeba castellanii str. Neff	14918586
ACA1_248380	CDS	ACA1_248380	NW_004457445.1	47016	51975	R	encoded by transcript ACA1_248380A; oxidoreductase, short chain dehydrogenase/reductase superfamily protein	complement(join(47016..47402,47467..47611,47701..48035,48261..48375,48461..48722,48912..49107,49315..49478,49603..49746,49857..49908,49998..50069,50151..50287,50431..50509,50650..50822,50945..51104,51181..51243,51332..51454,51540..51692,51788..51867,51966..51975))	Acanthamoeba castellanii str. Neff	14918561
ACA1_248390	CDS	ACA1_248390	NW_004457445.1	52671	54033	R	encoded by transcript ACA1_248390A; uncharacterized protein	complement(join(52671..52700,52725..52868,52978..53112,53224..53469,53532..53678,53789..53934,53994..54033))	Acanthamoeba castellanii str. Neff	14918562
ACA1_248400	CDS	ACA1_248400	NW_004457445.1	56197	57886	R	encoded by transcript ACA1_248400A; uncharacterized protein	complement(join(56197..56271,56367..56740,56806..56859,57002..57083,57120..57176,57266..57375,57444..57525,57623..57783,57850..57886))	Acanthamoeba castellanii str. Neff	14918563
ACA1_248410	CDS	ACA1_248410	NW_004457445.1	58726	69118	R	encoded by transcript ACA1_248410A; Alpha2-macroglobulin domain containing protein	complement(join(58726..58794,58881..59174,59352..59382,59452..59545,59619..59812,59895..59974,60077..60197,60305..60849,60929..61016,61122..61279,61368..61765,61838..62004,62073..62200,62279..62402,62489..62632,62739..62912,63015..63103,63189..63363,63449..63593,63682..63786,63913..64066,64141..64300,64381..64644,64716..64898,64970..65056,65130..65230,65298..65449,65566..65793,65876..66062,66152..66277,66348..66510,66584..66699,66773..66888,66959..67266,67340..67498,67533..67717,67782..67881,67959..68123,68223..68719,68825..68956,69071..69118))	Acanthamoeba castellanii str. Neff	14918564
ACA1_248420	CDS	ACA1_248420	NW_004457445.1	69286	69748	R	encoded by transcript ACA1_248420A; uncharacterized protein	complement(join(69286..69552,69653..69748))	Acanthamoeba castellanii str. Neff	14918565
ACA1_248530	CDS	ACA1_248530	NW_004457445.1	70276	72630	R	encoded by transcript ACA1_248530A; AMPdependent synthetase and ligase	complement(join(70276..70467,70552..70708,70783..70957,71056..71116,71198..71439,71509..71818,71872..72005,72086..72206,72358..72630))	Acanthamoeba castellanii str. Neff	14918566
ACA1_248540	CDS	ACA1_248540	NW_004457445.1	73041	73664	D	encoded by transcript ACA1_248540A; dynein light chain tctextype, putative	join(73041..73049,73112..73235,73410..73487,73567..73664)	Acanthamoeba castellanii str. Neff	14918567
ACA1_248560	CDS	ACA1_248560	NW_004457445.1	79538	83647	R	encoded by transcript ACA1_248560A; ATPase/histidine kinase/DNA gyrase B/HSP90 domain containing protein	complement(join(79538..79645,79716..79848,79939..80737,80852..81314,81423..81498,81593..81705,81870..81968,82169..82244,82332..82444,82555..82711,82838..82989,83106..83329,83485..83647))	Acanthamoeba castellanii str. Neff	14918569
ACA1_248570	CDS	ACA1_248570	NW_004457445.1	84875	87156	R	encoded by transcript ACA1_248570A; phenylalanine-tRNA ligase	complement(join(84875..84959,85116..85222,85356..85468,85628..85768,85852..85991,86092..86237,86319..86427,86526..86614,86709..86914,86985..87156))	Acanthamoeba castellanii str. Neff	14918570
ACA1_248580	CDS	ACA1_248580	NW_004457445.1	87423	90761	R	encoded by transcript ACA1_248580A; alpha/beta hydrolase fold domain containing protein	complement(join(87423..87590,87678..87787,87864..88486,88579..89249,89348..89509,89628..89775,89859..90287,90391..90473,90564..90761))	Acanthamoeba castellanii str. Neff	14918571
ACA1_248590	CDS	ACA1_248590	NW_004457445.1	91331	92793	R	encoded by transcript ACA1_248590A; uncharacterized protein	complement(join(91331..91799,91831..91919,92011..92474,92568..92666,92766..92793))	Acanthamoeba castellanii str. Neff	14918572
ACA1_248600	CDS	ACA1_248600	NW_004457445.1	93253	94780	D	encoded by transcript ACA1_248600A; mannosebinding protein	join(93253..93354,93480..93525,93626..93706,93780..94444,94516..94650,94727..94780)	Acanthamoeba castellanii str. Neff	14918573
ACA1_248610	CDS	ACA1_248610	NW_004457445.1	95026	95757	D	encoded by transcript ACA1_248610A; uncharacterized protein	95026..95757	Acanthamoeba castellanii str. Neff	14918574
ACA1_248620	CDS	ACA1_248620	NW_004457445.1	96252	98253	D	encoded by transcript ACA1_248620A; DEAD/DEAH box helicase domain containing protein	join(96252..96260,96307..96425,96500..96624,96751..96899,97002..97172,97278..97747,97824..98026,98090..98253)	Acanthamoeba castellanii str. Neff	14918575
ACA1_248630	CDS	ACA1_248630	NW_004457445.1	98403	100016	D	encoded by transcript ACA1_248630A; thioredoxin domain containing protein	join(98403..98586,98692..98823,98932..99219,99325..99506,99582..100016)	Acanthamoeba castellanii str. Neff	14918576
ACA1_248640	CDS	ACA1_248640	NW_004457445.1	100466	101792	D	encoded by transcript ACA1_248640A; protein kinase domain containing protein	join(100466..100650,100758..100992,101205..101792)	Acanthamoeba castellanii str. Neff	14918577
ACA1_248650	CDS	ACA1_248650	NW_004457445.1	102247	103823	D	encoded by transcript ACA1_248650A; Dehydrogenase/reductase SDR family member 12, putative	join(102247..102338,102406..102562,102681..102778,102932..103047,103125..103291,103410..103823)	Acanthamoeba castellanii str. Neff	14918578
ACA1_248660	CDS	ACA1_248660	NW_004457445.1	103886	105927	R	encoded by transcript ACA1_248660A; F-box domain containing protein	complement(join(103886..103978,104069..104298,104382..104837,104964..105927))	Acanthamoeba castellanii str. Neff	14918593
ACA1_248670	CDS	ACA1_248670	NW_004457445.1	106275	107817	R	encoded by transcript ACA1_248670A; CBS domain containing protein	complement(join(106275..106598,106722..106904,106976..107088,107171..107329,107387..107468,107577..107639,107749..107817))	Acanthamoeba castellanii str. Neff	14918594
ACA1_248680	CDS	ACA1_248680	NW_004457445.1	108455	117342	D	encoded by transcript ACA1_248680A; SAC3/GANP family protein	join(108455..109934,110021..110138,110239..110410,110485..110570,110655..110746,110844..110948,111109..111260,111342..111505,111600..111742,111854..111982,112269..112383,112490..112605,112729..112976,113060..113695,113767..113844,113996..114075,114196..114379,114475..114614,114692..114821,114907..115110,115193..115373,115451..115674,115852..117342)	Acanthamoeba castellanii str. Neff	14918595
ACA1_248690	CDS	ACA1_248690	NW_004457445.1	117780	121833	R	encoded by transcript ACA1_248690A; Fbox domain containing protein	complement(join(117780..118453,118555..118702,118790..118915,119005..119215,119343..120517,120716..120787,120877..121104,121191..121307,121366..121833))	Acanthamoeba castellanii str. Neff	14918596
ACA1_248800	CDS	ACA1_248800	NW_004457445.1	122317	122907	D	encoded by transcript ACA1_248800A; uncharacterized protein	122317..122907	Acanthamoeba castellanii str. Neff	14918597
ACA1_248810	CDS	ACA1_248810	NW_004457445.1	123542	124682	R	encoded by transcript ACA1_248810A; Scramblase	complement(join(123542..123695,123793..123917,124016..124208,124299..124380,124453..124524,124595..124682))	Acanthamoeba castellanii str. Neff	14918598
ACA1_248820	CDS	ACA1_248820	NW_004457445.1	125571	132382	D	encoded by transcript ACA1_248820A; serine/threonine protein kinase, putative	join(125571..125631,125694..125764,125844..125879,125976..126098,126170..126472,126548..126632,126732..126961,127116..127260,127344..127456,127530..127763,127850..128108,128180..128327,128422..129061,129231..129589,129699..129840,129931..130310,130421..130845,130997..131331,131432..131600,131694..131999,132090..132382)	Acanthamoeba castellanii str. Neff	14918599
ACA1_248830	CDS	ACA1_248830	NW_004457445.1	132523	134693	R	encoded by transcript ACA1_248830A; LIM domain containing protein	complement(join(132523..132641,132772..133090,133215..133273,133363..133490,133620..133656,133958..134693))	Acanthamoeba castellanii str. Neff	14918600
ACA1_248840	CDS	ACA1_248840	NW_004457445.1	134787	135897	R	encoded by transcript ACA1_248840A; uncharacterized protein	complement(join(134787..135257,135276..135424,135502..135673,135772..135897))	Acanthamoeba castellanii str. Neff	14918601
ACA1_248850	CDS	ACA1_248850	NW_004457445.1	135946	136869	R	encoded by transcript ACA1_248850A; Myb, DNA-binding domain containing protein	complement(join(135946..135986,136062..136167,136264..136376,136470..136642,136751..136869))	Acanthamoeba castellanii str. Neff	14918602
ACA1_248860	CDS	ACA1_248860	NW_004457445.1	137256	138071	D	encoded by transcript ACA1_248860A; Transloconassociated protein subunit gamma, putative	join(137256..137382,137493..137619,137683..137880,138005..138071)	Acanthamoeba castellanii str. Neff	14918603
ACA1_248870	CDS	ACA1_248870	NW_004457445.1	139017	139858	R	encoded by transcript ACA1_248870A; coated vesicle membrane protein	complement(join(139017..139147,139266..139373,139462..139858))	Acanthamoeba castellanii str. Neff	14918604
ACA1_248880	CDS	ACA1_248880	NW_004457445.1	139873	140476	R	encoded by transcript ACA1_248880A; uncharacterized protein	complement(join(139873..139998,140228..140476))	Acanthamoeba castellanii str. Neff	14918605
ACA1_248990	CDS	ACA1_248990	NW_004457445.1	141212	141673	R	encoded by transcript ACA1_248990A; uncharacterized protein	complement(join(141212..141249,141463..141673))	Acanthamoeba castellanii str. Neff	14918606
ACA1_249100	CDS	ACA1_249100	NW_004457445.1	141924	142811	R	encoded by transcript ACA1_249100A; uncharacterized protein	complement(141924..142811)	Acanthamoeba castellanii str. Neff	14918607
ACA1_249120	CDS	ACA1_249120	NW_004457445.1	144510	144768	R	encoded by transcript ACA1_249120A; uncharacterized protein	complement(join(144510..144589,144600..144768))	Acanthamoeba castellanii str. Neff	14918609
ACA1_249130	CDS	ACA1_249130	NW_004457445.1	145014	146567	R	encoded by transcript ACA1_249130A; uncharacterized protein	complement(join(145014..145107,145174..145441,145520..145646,145737..145901,145974..146071,146139..146144,146346..146394,146505..146567))	Acanthamoeba castellanii str. Neff	14918610
ACA1_249150	CDS	ACA1_249150	NW_004457445.1	152437	153353	R	encoded by transcript ACA1_249150A; uncharacterized protein	complement(join(152437..152479,152581..152726,153318..153353))	Acanthamoeba castellanii str. Neff	14918612
ACA1_249160	CDS	ACA1_249160	NW_004457445.1	153966	155470	R	encoded by transcript ACA1_249160A; nucleolar zincfinger protein	complement(join(153966..154806,154818..155470))	Acanthamoeba castellanii str. Neff	14918613
ACA1_249170	CDS	ACA1_249170	NW_004457445.1	156428	157651	D	encoded by transcript ACA1_249170A; uncharacterized protein	join(156428..156739,156963..157287,157350..157651)	Acanthamoeba castellanii str. Neff	14918614
ACA1_249280	CDS	ACA1_249280	NW_004457445.1	158109	159778	R	encoded by transcript ACA1_249280A; uncharacterized protein	complement(join(158109..158303,158371..158688,158906..159072,159141..159151,159166..159320,159377..159689,159768..159778))	Acanthamoeba castellanii str. Neff	14918615
ACA1_249290	CDS	ACA1_249290	NW_004457445.1	160442	162312	D	encoded by transcript ACA1_249290A; uncharacterized protein	join(160442..161578,161642..161749,161811..162121,162189..162312)	Acanthamoeba castellanii str. Neff	14918616
ACA1_249310	CDS	ACA1_249310	NW_004457445.1	165191	166548	D	encoded by transcript ACA1_249310A; uncharacterized protein	join(165191..165227,165319..165907,165921..165949,166022..166548)	Acanthamoeba castellanii str. Neff	14918618
ACA1_249320	CDS	ACA1_249320	NW_004457445.1	167107	168546	D	encoded by transcript ACA1_249320A; uncharacterized protein	167107..168546	Acanthamoeba castellanii str. Neff	14918587
ACA1_249330	CDS	ACA1_249330	NW_004457445.1	168844	170068	D	encoded by transcript ACA1_249330A; uncharacterized protein	join(168844..168983,169078..169186,169254..169364,169462..169531,169616..169763,169900..170068)	Acanthamoeba castellanii str. Neff	14918588
ACA1_249340	CDS	ACA1_249340	NW_004457445.1	170186	170979	D	encoded by transcript ACA1_249340A; Dopa 4,5dioxygenase family protein	join(170186..170293,170357..170439,170525..170654,170839..170979)	Acanthamoeba castellanii str. Neff	14918589
ACA1_249350	CDS	ACA1_249350	NW_004457445.1	171066	172704	R	encoded by transcript ACA1_249350A; GATSlike protein 1, putative	complement(join(171066..171125,171248..171342,171454..171605,171688..171731,171845..172051,172158..172233,172568..172704))	Acanthamoeba castellanii str. Neff	14918590
ACA1_249460	CDS	ACA1_249460	NW_004457445.1	176174	180028	D	encoded by transcript ACA1_249460A; uDENN domain containing protein	join(176174..176234,176512..176665,176775..176927,177010..177154,179019..179142,179275..179470,179544..179785,179829..>180028)	Acanthamoeba castellanii str. Neff	14918591
ACA1_029360	CDS	ACA1_029360	NW_004457444.1	326	800	R	encoded by transcript ACA1_029360A; regulator of chromosome condensation (RCC1) repeat domain containing protein	complement(join(<326..415,532..654,741..800))	Acanthamoeba castellanii str. Neff	14918557
ACA1_029370	CDS	ACA1_029370	NW_004457444.1	1203	2712	D	encoded by transcript ACA1_029370A; leucine rich repeat domain containing protein	join(1203..1403,1574..1659,1772..1878,2026..2169,2259..2505,2619..2712)	Acanthamoeba castellanii str. Neff	14918554
ACA1_029380	CDS	ACA1_029380	NW_004457444.1	2890	5300	D	encoded by transcript ACA1_029380A; uncharacterized protein	join(2890..3016,3126..3218,3311..3476,3569..3653,3772..3874,4053..4162,4275..4400,4523..4617,4745..4807,4877..4933,5036..5130,5200..5300)	Acanthamoeba castellanii str. Neff	14918558
ACA1_029390	CDS	ACA1_029390	NW_004457444.1	5434	9187	R	encoded by transcript ACA1_029390A; WD repeat protein	complement(join(5434..5503,5598..5713,5806..5907,6018..6108,6191..6319,6368..6408,6473..6565,6702..6843,6959..7087,7193..7254,7422..7482,7610..7761,7979..8103,8197..8341,8559..8729,9143..9187))	Acanthamoeba castellanii str. Neff	14918559
ACA1_029400	CDS	ACA1_029400	NW_004457444.1	9058	10027	D	encoded by transcript ACA1_029400A; Yip1 domain containing protein	join(9058..9542,9670..10027)	Acanthamoeba castellanii str. Neff	14918556
ACA1_029410	CDS	ACA1_029410	NW_004457444.1	10085	10551	R	encoded by transcript ACA1_029410A; uncharacterized protein	complement(<10085..>10551)	Acanthamoeba castellanii str. Neff	14918555
ACA1_316120	CDS	ACA1_316120	NW_004457443.1	8121	8582	D	encoded by transcript ACA1_316120A; uncharacterized protein	join(8121..8132,8208..8582)	Acanthamoeba castellanii str. Neff	14918552
ACA1_316230	CDS	ACA1_316230	NW_004457443.1	11228	11820	D	encoded by transcript ACA1_316230A; uncharacterized protein	join(11228..11299,11440..>11820)	Acanthamoeba castellanii str. Neff	14918553
ACA1_316340	CDS	ACA1_316340	NW_004457443.1	13871	15963	R	encoded by transcript ACA1_316340A; Ser/Thr phosphatase family superfamily protein	complement(join(<13871..14012,14092..14472,14597..14732,14829..14994,15245..15269,15372..15482,15618..15735,15852..>15963))	Acanthamoeba castellanii str. Neff	14918551
ACA1_316550	CDS	ACA1_316550	NW_004457443.1	17023	19553	D	encoded by transcript ACA1_316550A; inosine5'-monophosphate dehydrogenase	join(17023..17067,17198..17260,17280..17313,17375..17523,17602..17684,17807..18031,18125..18209,18287..18351,18644..18697,18786..18843,18913..19034,19388..19553)	Acanthamoeba castellanii str. Neff	14918550
ACA1_056770	CDS	ACA1_056770	NW_004457442.1	670	975	D	encoded by transcript ACA1_056770A; uncharacterized protein	join(670..728,792..975)	Acanthamoeba castellanii str. Neff	14917895
ACA1_056880	CDS	ACA1_056880	NW_004457442.1	2040	2528	R	encoded by transcript ACA1_056880A; uncharacterized protein	complement(2040..2528)	Acanthamoeba castellanii str. Neff	14918320
ACA1_056890	CDS	ACA1_056890	NW_004457442.1	4696	5460	D	encoded by transcript ACA1_056890A; uncharacterized protein	join(4696..4893,4909..5460)	Acanthamoeba castellanii str. Neff	14918156
ACA1_056900	CDS	ACA1_056900	NW_004457442.1	6590	6841	D	encoded by transcript ACA1_056900A; K+ channel tetramerization subfamily protein	6590..6841	Acanthamoeba castellanii str. Neff	14918157
ACA1_056910	CDS	ACA1_056910	NW_004457442.1	8487	8846	D	encoded by transcript ACA1_056910A; uncharacterized protein	8487..8846	Acanthamoeba castellanii str. Neff	14918535
ACA1_056920	CDS	ACA1_056920	NW_004457442.1	9210	9569	D	encoded by transcript ACA1_056920A; uncharacterized protein	9210..9569	Acanthamoeba castellanii str. Neff	14918536
ACA1_056940	CDS	ACA1_056940	NW_004457442.1	10533	11701	D	encoded by transcript ACA1_056940A; cysteine protease	join(10533..10944,11021..11300,11427..11544,11669..11701)	Acanthamoeba castellanii str. Neff	14918538
ACA1_056950	CDS	ACA1_056950	NW_004457442.1	12159	13532	D	encoded by transcript ACA1_056950A; uncharacterized protein	join(12159..12479,12519..13532)	Acanthamoeba castellanii str. Neff	14918539
ACA1_056960	CDS	ACA1_056960	NW_004457442.1	13595	14619	D	encoded by transcript ACA1_056960A; uncharacterized protein	join(13595..13694,13720..13778,13978..14619)	Acanthamoeba castellanii str. Neff	14918540
ACA1_056970	CDS	ACA1_056970	NW_004457442.1	14973	16041	R	encoded by transcript ACA1_056970A; proliferating cell nuclear antigen, Nterminal domain containing protein	complement(join(14973..15029,15127..16041))	Acanthamoeba castellanii str. Neff	14918541
ACA1_056980	CDS	ACA1_056980	NW_004457442.1	19081	19440	D	encoded by transcript ACA1_056980A; uncharacterized protein	19081..19440	Acanthamoeba castellanii str. Neff	14918542
ACA1_056990	CDS	ACA1_056990	NW_004457442.1	19795	20049	D	encoded by transcript ACA1_056990A; uncharacterized protein	join(19795..19930,19970..20049)	Acanthamoeba castellanii str. Neff	14918543
ACA1_057000	CDS	ACA1_057000	NW_004457442.1	20362	21261	D	encoded by transcript ACA1_057000A; uncharacterized protein	20362..21261	Acanthamoeba castellanii str. Neff	14918544
ACA1_057010	CDS	ACA1_057010	NW_004457442.1	21275	22776	R	encoded by transcript ACA1_057010A; dihydrofolate reductase	complement(join(21275..21966,22068..22191,22246..22776))	Acanthamoeba castellanii str. Neff	14918545
ACA1_057020	CDS	ACA1_057020	NW_004457442.1	22867	23839	D	encoded by transcript ACA1_057020A; uncharacterized protein	join(22867..23569,23649..23839)	Acanthamoeba castellanii str. Neff	14918546
ACA1_057030	CDS	ACA1_057030	NW_004457442.1	24190	25455	D	encoded by transcript ACA1_057030A; uncharacterized protein	24190..25455	Acanthamoeba castellanii str. Neff	14918547
ACA1_057040	CDS	ACA1_057040	NW_004457442.1	26443	27421	R	encoded by transcript ACA1_057040A; uncharacterized protein	complement(join(26443..26707,26727..27421))	Acanthamoeba castellanii str. Neff	14918548
ACA1_057050	CDS	ACA1_057050	NW_004457442.1	29262	31219	R	encoded by transcript ACA1_057050A; uncharacterized protein	complement(join(29262..29421,29507..29588,29676..29914,29996..30254,30338..30498,30565..30655,30728..30943,31039..31219))	Acanthamoeba castellanii str. Neff	14918549
ACA1_057060	CDS	ACA1_057060	NW_004457442.1	31816	35634	R	encoded by transcript ACA1_057060A; Exportin 7, putative	complement(join(31816..32035,32146..32323,32407..32587,32674..32850,32949..33188,33447..33638,33727..33790,33883..33963,34046..34167,34336..34490,34583..34625,34703..34830,34983..35153,35260..35412,35514..35634))	Acanthamoeba castellanii str. Neff	14918040
ACA1_057070	CDS	ACA1_057070	NW_004457442.1	36446	37334	R	encoded by transcript ACA1_057070A; exportin 7, putative	complement(join(36446..36497,36653..36803,37067..37334))	Acanthamoeba castellanii str. Neff	14918041
ACA1_057080	CDS	ACA1_057080	NW_004457442.1	38104	39825	R	encoded by transcript ACA1_057080A; RNA recognition motif domain containing protein	complement(join(38104..38313,38441..38540,38634..38809,39162..39507,39614..39825))	Acanthamoeba castellanii str. Neff	14918042
ACA1_057090	CDS	ACA1_057090	NW_004457442.1	39939	41506	R	encoded by transcript ACA1_057090A; ZFAND1 protein	complement(join(39939..40070,40137..40232,40300..40383,40456..40590,40698..40738,40843..40990,41120..41191,41287..41348,41452..41506))	Acanthamoeba castellanii str. Neff	14918043
ACA1_057100	CDS	ACA1_057100	NW_004457442.1	41584	46562	R	encoded by transcript ACA1_057100A; betamannosidase	complement(join(41584..42216,42291..42449,42535..42818,42896..42974,43087..43181,43275..43350,43417..43523,43605..43671,43772..43904,43988..44082,44147..44248,44342..44480,44550..44589,44672..44807,44904..44995,45089..45176,45278..45445,45523..45567,45659..45958,46085..46221,46367..46562))	Acanthamoeba castellanii str. Neff	14918044
ACA1_057110	CDS	ACA1_057110	NW_004457442.1	46838	49756	R	encoded by transcript ACA1_057110A; uncharacterized protein	complement(join(46838..47217,47278..47322,47394..47577,47664..48018,48092..48302,48383..48401,48488..48663,48732..48807,48880..49048,49143..49338,49501..49599,49678..49756))	Acanthamoeba castellanii str. Neff	14918045
ACA1_057120	CDS	ACA1_057120	NW_004457442.1	51971	53833	D	encoded by transcript ACA1_057120A; AlanyltRNA synthetase, putative	join(51971..52153,52224..52368,52442..52528,52617..52677,52758..52892,52973..53096,53163..53280,53376..53518,53591..53833)	Acanthamoeba castellanii str. Neff	14918046
ACA1_057130	CDS	ACA1_057130	NW_004457442.1	53942	55567	R	encoded by transcript ACA1_057130A; Ras subfamily protein	complement(join(53942..54147,54219..54314,54439..54606,54686..54949,55013..55175,55299..55399,55504..55567))	Acanthamoeba castellanii str. Neff	14918047
ACA1_057140	CDS	ACA1_057140	NW_004457442.1	55704	58192	D	encoded by transcript ACA1_057140A; Fbox domain containing protein	join(55704..56208,56370..56522,56663..56839,56944..57071,57150..57195,57277..57353,57435..57627,57716..57886,57997..58055,58166..58192)	Acanthamoeba castellanii str. Neff	14918048
ACA1_057150	CDS	ACA1_057150	NW_004457442.1	58507	62184	D	encoded by transcript ACA1_057150A; uncharacterized protein	join(58507..59743,59861..60013,60123..60455,60501..60663,60764..60854,60941..61013,61107..61231,61312..61397,61491..62184)	Acanthamoeba castellanii str. Neff	14918158
ACA1_057160	CDS	ACA1_057160	NW_004457442.1	62302	63276	R	encoded by transcript ACA1_057160A; HPP family protein	complement(join(62302..62542,62620..62755,62851..62933,63035..63276))	Acanthamoeba castellanii str. Neff	14918159
ACA1_057170	CDS	ACA1_057170	NW_004457442.1	64005	67036	R	encoded by transcript ACA1_057170A; uncharacterized protein	complement(join(64005..64109,64213..64327,64398..64463,64556..64727,64842..64916,65053..65911,65960..66157,66303..66424,66500..66629,66740..67036))	Acanthamoeba castellanii str. Neff	14918160
ACA1_057180	CDS	ACA1_057180	NW_004457442.1	67543	68846	D	encoded by transcript ACA1_057180A; Nucleosome assembly protein (NAP), putative	join(67543..68097,68164..68304,68400..68846)	Acanthamoeba castellanii str. Neff	14918161
ACA1_057200	CDS	ACA1_057200	NW_004457442.1	82039	84465	R	encoded by transcript ACA1_057200A; zinc finger domain containing protein	complement(join(82039..82083,82162..82249,82325..82404,82493..82727,82850..83026,83146..83300,83386..83441,83518..83597,83711..83870,83953..84289,84433..84465))	Acanthamoeba castellanii str. Neff	14918163
ACA1_057210	CDS	ACA1_057210	NW_004457442.1	84654	85575	R	encoded by transcript ACA1_057210A; uncharacterized protein	complement(join(84654..84801,84884..85003,85118..85575))	Acanthamoeba castellanii str. Neff	14918164
ACA1_057220	CDS	ACA1_057220	NW_004457442.1	85755	86855	R	encoded by transcript ACA1_057220A; uncharacterized protein	complement(85755..86855)	Acanthamoeba castellanii str. Neff	14918165
ACA1_057230	CDS	ACA1_057230	NW_004457442.1	87661	92570	D	encoded by transcript ACA1_057230A; Ubox domain containing protein	join(87661..88759,88841..89137,89234..89368,89451..89816,89879..89951,90115..90304,90379..90691,90775..90882,90962..91088,91332..91500,91524..91827,91913..91952,92035..92127,92234..92570)	Acanthamoeba castellanii str. Neff	14918166
ACA1_057240	CDS	ACA1_057240	NW_004457442.1	93120	96183	R	encoded by transcript ACA1_057240A; MIT domain containing protein	complement(join(93120..93229,93335..93466,93568..93792,93915..93987,94042..94130,94241..94399,94495..94567,94657..95023,95117..95296,95388..95471,95568..95634,95756..95884,96033..96183))	Acanthamoeba castellanii str. Neff	14918167
ACA1_057250	CDS	ACA1_057250	NW_004457442.1	96538	98802	R	encoded by transcript ACA1_057250A; Fatty acid desaturase, putative	complement(join(96538..96705,96752..96888,96983..97203,97368..97440,97509..97669,97744..97916,97983..98252,98647..98802))	Acanthamoeba castellanii str. Neff	14918168
ACA1_057270	CDS	ACA1_057270	NW_004457442.1	110923	111423	D	encoded by transcript ACA1_057270A; uncharacterized protein	join(110923..110958,111250..111423)	Acanthamoeba castellanii str. Neff	14918170
ACA1_057280	CDS	ACA1_057280	NW_004457442.1	111603	114443	D	encoded by transcript ACA1_057280A; peptidase, S8/S53 subfamily protein	join(111603..111687,111762..111868,111953..112042,112111..112201,112264..112362,112462..112605,112677..112740,112827..112878,112951..113008,113076..113233,113321..113469,113529..113619,113694..113789,113861..113968,114032..114143,114226..114443)	Acanthamoeba castellanii str. Neff	14918171
ACA1_057290	CDS	ACA1_057290	NW_004457442.1	114631	116277	R	encoded by transcript ACA1_057290A; uncharacterized protein	complement(join(114631..114696,114780..114938,115037..115117,115304..115311,115324..115496,115577..115647,115759..116277))	Acanthamoeba castellanii str. Neff	14918172
ACA1_057300	CDS	ACA1_057300	NW_004457442.1	116458	117450	D	encoded by transcript ACA1_057300A; uncharacterized protein	116458..117450	Acanthamoeba castellanii str. Neff	14918173
ACA1_057310	CDS	ACA1_057310	NW_004457442.1	117529	118724	R	encoded by transcript ACA1_057310A; DNA methyltransferaselike 1, putative	complement(join(117529..117701,117814..117943,118013..118159,118288..118395,118524..118724))	Acanthamoeba castellanii str. Neff	14918174
ACA1_057320	CDS	ACA1_057320	NW_004457442.1	118853	120562	R	encoded by transcript ACA1_057320A; RNA pseudouridine synthase, putative	complement(join(118853..119142,119219..119832,119910..120021,120096..120211,120297..120562))	Acanthamoeba castellanii str. Neff	14918175
ACA1_057330	CDS	ACA1_057330	NW_004457442.1	120823	121521	D	encoded by transcript ACA1_057330A; Hypothetical protein	120823..121521	Acanthamoeba castellanii str. Neff	14918176
ACA1_057340	CDS	ACA1_057340	NW_004457442.1	121728	122360	R	encoded by transcript ACA1_057340A; WD domain, G-beta repeat-containing protein	complement(121728..122360)	Acanthamoeba castellanii str. Neff	14918177
ACA1_057360	CDS	ACA1_057360	NW_004457442.1	123123	124431	D	encoded by transcript ACA1_057360A; signal peptidase I, putative	join(123123..123236,123302..123410,123516..123661,123725..123788,123876..123934,124040..124235,124358..124431)	Acanthamoeba castellanii str. Neff	14918179
ACA1_057370	CDS	ACA1_057370	NW_004457442.1	124563	129438	D	encoded by transcript ACA1_057370A; uncharacterized protein	join(124563..124650,124765..125008,125133..129438)	Acanthamoeba castellanii str. Neff	14918180
ACA1_057380	CDS	ACA1_057380	NW_004457442.1	129540	130196	R	encoded by transcript ACA1_057380A; Mimivirus encoded protein, putative	complement(129540..130196)	Acanthamoeba castellanii str. Neff	14918181
ACA1_057390	CDS	ACA1_057390	NW_004457442.1	130505	131245	R	encoded by transcript ACA1_057390A; LSM domain containing protein	complement(join(130505..130707,130834..131245))	Acanthamoeba castellanii str. Neff	14918448
ACA1_057400	CDS	ACA1_057400	NW_004457442.1	131509	135751	D	encoded by transcript ACA1_057400A; leucine rich repeat domain containing protein	join(131509..131962,132086..132202,132302..132472,132571..132645,132714..132788,132880..132948,133025..133111,133226..133357,133470..133871,133945..134067,134481..134633,134764..134922,135004..135093,135207..135485,135702..135751)	Acanthamoeba castellanii str. Neff	14918449
ACA1_057410	CDS	ACA1_057410	NW_004457442.1	135839	136473	R	encoded by transcript ACA1_057410A; uncharacterized protein	complement(join(135839..135966,136036..136140,136206..136473))	Acanthamoeba castellanii str. Neff	14918450
ACA1_057420	CDS	ACA1_057420	NW_004457442.1	137157	139524	D	encoded by transcript ACA1_057420A; ATPase, AAA domain containing protein	join(137157..137690,137793..138065,138173..138447,138513..139009,139088..139524)	Acanthamoeba castellanii str. Neff	14918451
ACA1_057430	CDS	ACA1_057430	NW_004457442.1	139613	142076	R	encoded by transcript ACA1_057430A; uncharacterized protein	complement(join(139613..140169,140269..140398,140478..140621,140699..140798,140901..141113,141204..141406,141576..142076))	Acanthamoeba castellanii str. Neff	14918452
ACA1_057440	CDS	ACA1_057440	NW_004457442.1	142200	143908	D	encoded by transcript ACA1_057440A; methyltransferase domain containing protein	join(142200..142547,142631..142748,142988..143305,143421..143593,143705..143908)	Acanthamoeba castellanii str. Neff	14918453
ACA1_057450	CDS	ACA1_057450	NW_004457442.1	144302	145268	D	encoded by transcript ACA1_057450A; enoylCoA hydratase/isomerase, putative	join(144302..144453,144543..144661,144804..145030,145140..145268)	Acanthamoeba castellanii str. Neff	14918454
ACA1_057460	CDS	ACA1_057460	NW_004457442.1	145341	147916	R	encoded by transcript ACA1_057460A; uncharacterized protein	complement(join(145341..145497,145599..145729,145890..147412,147513..147564,147731..147916))	Acanthamoeba castellanii str. Neff	14918455
ACA1_057470	CDS	ACA1_057470	NW_004457442.1	148062	149145	R	encoded by transcript ACA1_057470A; uncharacterized protein	complement(join(148062..148395,148508..149145))	Acanthamoeba castellanii str. Neff	14918456
ACA1_057490	CDS	ACA1_057490	NW_004457442.1	150513	152552	R	encoded by transcript ACA1_057490A; zinc carboxypeptidase superfamily protein	complement(join(150513..150616,150699..150851,150919..150994,151072..151184,151275..151390,151470..151582,151678..151781,151867..151933,152012..152131,152229..152552))	Acanthamoeba castellanii str. Neff	14918458
ACA1_057500	CDS	ACA1_057500	NW_004457442.1	153347	153711	D	encoded by transcript ACA1_057500A; uncharacterized protein	join(153347..153423,153508..153597,153660..153711)	Acanthamoeba castellanii str. Neff	14918459
ACA1_057510	CDS	ACA1_057510	NW_004457442.1	154021	155617	R	encoded by transcript ACA1_057510A; uncharacterized protein	complement(join(154021..154226,154296..154490,154572..154669,154749..154874,155043..155178,155449..155617))	Acanthamoeba castellanii str. Neff	14918460
ACA1_057520	CDS	ACA1_057520	NW_004457442.1	156003	159343	D	encoded by transcript ACA1_057520A; uncharacterized protein	join(156003..156147,156244..156398,156468..156542,156618..156713,156762..156871,156941..157412,157495..157636,157738..158538,158607..158722,158808..158895,158979..159343)	Acanthamoeba castellanii str. Neff	14918461
ACA1_057530	CDS	ACA1_057530	NW_004457442.1	159641	162495	D	encoded by transcript ACA1_057530A; phosphatase, putative	join(159641..159728,159850..159878,159990..160048,160148..160236,160399..160469,160554..160613,160690..160818,160961..161081,161174..161334,161430..161660,161748..161893,162115..162230,162332..162495)	Acanthamoeba castellanii str. Neff	14918462
ACA1_057540	CDS	ACA1_057540	NW_004457442.1	163004	164948	D	encoded by transcript ACA1_057540A; Ubox domain containing protein	join(163004..163063,163202..163356,163433..163762,163926..164233,164313..164477,164560..164619,164848..164948)	Acanthamoeba castellanii str. Neff	14918463
ACA1_057550	CDS	ACA1_057550	NW_004457442.1	164297	165683	R	encoded by transcript ACA1_057550A; Ras subfamily protein	complement(join(164297..164461,164532..164678,164859..164960,165070..165146,165202..165242,165408..165472,165552..>165683))	Acanthamoeba castellanii str. Neff	14918464
ACA1_057560	CDS	ACA1_057560	NW_004457442.1	166306	167567	R	encoded by transcript ACA1_057560A; uncharacterized protein	complement(join(166306..166379,166563..166812,167031..167221,167276..167567))	Acanthamoeba castellanii str. Neff	14918465
ACA1_057570	CDS	ACA1_057570	NW_004457442.1	169036	170202	D	encoded by transcript ACA1_057570A; uncharacterized protein	join(169036..169126,169159..169226,169283..169462,169530..169697,169915..170202)	Acanthamoeba castellanii str. Neff	14918466
ACA1_057780	CDS	ACA1_057780	NW_004457442.1	177260	177769	R	encoded by transcript ACA1_057780A; uncharacterized protein	complement(join(<177260..177288,177625..177769))	Acanthamoeba castellanii str. Neff	14918467
ACA1_057790	CDS	ACA1_057790	NW_004457442.1	179297	180306	D	encoded by transcript ACA1_057790A; proteasome subunit protein, putative	join(179297..179391,179505..179612,179702..179913,180011..180306)	Acanthamoeba castellanii str. Neff	14918468
ACA1_057800	CDS	ACA1_057800	NW_004457442.1	180813	182052	R	encoded by transcript ACA1_057800A; bZIP transcription factor domain containing protein	complement(join(180813..181157,181235..181668,181788..182052))	Acanthamoeba castellanii str. Neff	14918469
ACA1_057810	CDS	ACA1_057810	NW_004457442.1	183529	186216	D	encoded by transcript ACA1_057810A; Ras subfamily protein	join(183529..183645,183754..183861,184007..184127,184234..184325,184393..184485,184559..184621,184723..184811,184881..184940,185049..185150,185228..185351,185447..185458,185537..185673,185746..185832,185973..186216)	Acanthamoeba castellanii str. Neff	14918470
ACA1_057820	CDS	ACA1_057820	NW_004457442.1	186259	187784	R	encoded by transcript ACA1_057820A; dual specificity phosphatase, putative	complement(join(186259..186380,186558..186668,186781..186866,186951..187025,187137..187302,187400..187630,187697..187784))	Acanthamoeba castellanii str. Neff	14918471
ACA1_057830	CDS	ACA1_057830	NW_004457442.1	188219	189390	D	encoded by transcript ACA1_057830A; FeS protein assembly co-chaperone HscB, putative	join(188219..188270,188433..188700,188775..188871,188956..189045,189109..189390)	Acanthamoeba castellanii str. Neff	14918346
ACA1_057840	CDS	ACA1_057840	NW_004457442.1	189568	193205	D	encoded by transcript ACA1_057840A; helicase, putative	join(189568..189790,189929..190012,190041..190631,190724..190879,190953..191055,191128..191221,191340..191466,191556..191701,191785..191853,191920..192002,192081..192282,192367..192488,192557..192649,192722..192787,192857..192935,193041..193205)	Acanthamoeba castellanii str. Neff	14918347
ACA1_057850	CDS	ACA1_057850	NW_004457442.1	193229	194482	D	encoded by transcript ACA1_057850A; uncharacterized protein	join(193229..193845,193912..194482)	Acanthamoeba castellanii str. Neff	14918348
ACA1_057860	CDS	ACA1_057860	NW_004457442.1	194554	196762	D	encoded by transcript ACA1_057860A; hydrolase, alpha/beta fold domain containing protein	join(194554..194920,195047..195151,195243..195329,195410..195466,195549..195617,195704..196149,196276..196561,196579..196599,196659..196762)	Acanthamoeba castellanii str. Neff	14918349
ACA1_057870	CDS	ACA1_057870	NW_004457442.1	197876	198994	R	encoded by transcript ACA1_057870A; uncharacterized protein	complement(join(197876..198211,198289..198528,198608..198994))	Acanthamoeba castellanii str. Neff	14918350
ACA1_057880	CDS	ACA1_057880	NW_004457442.1	199030	200589	R	encoded by transcript ACA1_057880A; uncharacterized protein	complement(join(199030..199157,199239..199437,199578..199750,199827..199922,200012..200159,200244..200359,200439..200589))	Acanthamoeba castellanii str. Neff	14918351
ACA1_057890	CDS	ACA1_057890	NW_004457442.1	202350	204661	R	encoded by transcript ACA1_057890A; uncharacterized protein	complement(join(202350..202468,202645..202800,202862..203231,203402..203529,203591..203870,203949..204055,204468..204522,204623..204661))	Acanthamoeba castellanii str. Neff	14918352
ACA1_057900	CDS	ACA1_057900	NW_004457442.1	205322	205414	R	encoded by transcript ACA1_057900A; uncharacterized protein	complement(205322..205414)	Acanthamoeba castellanii str. Neff	14918353
ACA1_057910	CDS	ACA1_057910	NW_004457442.1	206585	207137	D	encoded by transcript ACA1_057910A; uncharacterized protein	join(206585..206683,206832..207137)	Acanthamoeba castellanii str. Neff	14918354
ACA1_057920	CDS	ACA1_057920	NW_004457442.1	207211	207540	D	encoded by transcript ACA1_057920A; uncharacterized protein	join(207211..207378,207460..207540)	Acanthamoeba castellanii str. Neff	14918355
ACA1_057930	CDS	ACA1_057930	NW_004457442.1	210220	210739	R	encoded by transcript ACA1_057930A; uncharacterized protein	complement(join(210220..210429,210518..210631,210698..210739))	Acanthamoeba castellanii str. Neff	14918356
ACA1_057940	CDS	ACA1_057940	NW_004457442.1	211883	216586	D	encoded by transcript ACA1_057940A; lysosomal alphamannosidase	join(211883..211987,212201..212325,212393..212547,212639..212719,212797..212853,212942..213070,213174..213312,213396..213555,213641..213767,213843..213964,214039..214102,214166..214420,214485..214671,214752..214919,214999..215141,215237..215358,215437..215630,215718..215772,215852..216037,216104..216418,216488..216586)	Acanthamoeba castellanii str. Neff	14918357
ACA1_057950	CDS	ACA1_057950	NW_004457442.1	216660	217364	R	encoded by transcript ACA1_057950A; uncharacterized protein	complement(join(216660..217148,217188..217364))	Acanthamoeba castellanii str. Neff	14918358
ACA1_057960	CDS	ACA1_057960	NW_004457442.1	217625	223413	D	encoded by transcript ACA1_057960A; BTB/POZ domain containing protein	join(217625..217683,217739..217824,217961..218113,218157..218209,218282..218335,218456..218545,218653..218784,218882..218992,219058..219195,219296..219381,219502..220116,220197..220346,220433..220538,220600..220706,220785..220842,220937..221017,221106..221233,221358..221408,221535..221722,221809..221904,221969..222072,222193..222244,222333..222422,222503..222582,222661..223413)	Acanthamoeba castellanii str. Neff	14918359
ACA1_057970	CDS	ACA1_057970	NW_004457442.1	223575	224800	R	encoded by transcript ACA1_057970A; GPR1/FUN34/yaaH family protein	complement(join(223575..223763,223862..224012,224098..224368,224452..224601,224707..224800))	Acanthamoeba castellanii str. Neff	14918360
ACA1_057980	CDS	ACA1_057980	NW_004457442.1	225805	226615	R	encoded by transcript ACA1_057980A; uncharacterized protein	complement(join(225805..225835,226041..226615))	Acanthamoeba castellanii str. Neff	14918361
ACA1_057990	CDS	ACA1_057990	NW_004457442.1	227027	228092	R	encoded by transcript ACA1_057990A; uncharacterized protein	complement(join(227027..227067,227133..227235,227612..227961,228041..228092))	Acanthamoeba castellanii str. Neff	14918362
ACA1_058000	CDS	ACA1_058000	NW_004457442.1	228550	229763	D	encoded by transcript ACA1_058000A; WW domain containing oxidoreductase	join(228550..228814,228900..229120,229230..229352,229430..229524,229607..229763)	Acanthamoeba castellanii str. Neff	14918363
ACA1_058010	CDS	ACA1_058010	NW_004457442.1	229954	231637	D	encoded by transcript ACA1_058010A; WD40 repeat protein	join(229954..230098,230273..230331,230402..230545,230639..230752,230867..230991,231075..231275,231348..231439,231522..231637)	Acanthamoeba castellanii str. Neff	14918364
ACA1_058020	CDS	ACA1_058020	NW_004457442.1	231853	232881	R	encoded by transcript ACA1_058020A; C4methyl sterol oxidase	complement(join(231853..232040,232130..232392,232484..232881))	Acanthamoeba castellanii str. Neff	14918365
ACA1_058030	CDS	ACA1_058030	NW_004457442.1	233689	234621	D	encoded by transcript ACA1_058030A; HDCKB03P, putative	join(233689..233754,233829..233912,234011..234102,234184..234244,234353..234454,234550..234621)	Acanthamoeba castellanii str. Neff	14918366
ACA1_058040	CDS	ACA1_058040	NW_004457442.1	235120	235740	R	encoded by transcript ACA1_058040A; Mimivirus encoded protein, putative	complement(235120..235740)	Acanthamoeba castellanii str. Neff	14918426
ACA1_058050	CDS	ACA1_058050	NW_004457442.1	236094	240011	R	encoded by transcript ACA1_058050A; uncharacterized protein	complement(join(236094..236419,236506..236650,236757..236904,236974..237137,237176..237282,237339..237458,237532..237676,237765..237837,237908..238001,238090..238261,238435..238565,238632..238796,238871..239330,239426..239546,239653..240011))	Acanthamoeba castellanii str. Neff	14918427
ACA1_058060	CDS	ACA1_058060	NW_004457442.1	240687	243848	R	encoded by transcript ACA1_058060A; MAP kinase kinase	complement(join(240687..240997,241104..241287,241360..242004,242114..242233,242319..242445,242521..242572,242710..242881,242960..243058,243196..243276,243368..243435,243528..243594,243708..243848))	Acanthamoeba castellanii str. Neff	14918428
ACA1_058070	CDS	ACA1_058070	NW_004457442.1	244163	246469	R	encoded by transcript ACA1_058070A; transporter, major facilitator subfamily protein	complement(join(244163..244503,244667..244747,244843..244974,245070..245226,245303..245423,245482..245569,245659..245735,245797..245866,245945..246077,246140..246234,246352..246469))	Acanthamoeba castellanii str. Neff	14918429
ACA1_058080	CDS	ACA1_058080	NW_004457442.1	246856	248653	R	encoded by transcript ACA1_058080A; uncharacterized protein	complement(join(246856..246905,246974..247797,247872..248020,248079..248161,248395..248479,248558..248653))	Acanthamoeba castellanii str. Neff	14918430
ACA1_058090	CDS	ACA1_058090	NW_004457442.1	249129	250312	D	encoded by transcript ACA1_058090A; zinc finger domain containing protein	join(249129..249368,249465..249579,249649..249840,249906..250312)	Acanthamoeba castellanii str. Neff	14918431
ACA1_058100	CDS	ACA1_058100	NW_004457442.1	250722	254372	D	encoded by transcript ACA1_058100A; coppertranslocating P-type ATPase	join(250722..251042,251103..251233,251254..251566,251637..251709,251773..251919,251987..252193,252263..252498,252590..252785,252883..254372)	Acanthamoeba castellanii str. Neff	14918432
ACA1_058110	CDS	ACA1_058110	NW_004457442.1	254701	255321	D	encoded by transcript ACA1_058110A; Mimivirus encoded protein, putative	254701..255321	Acanthamoeba castellanii str. Neff	14918433
ACA1_058120	CDS	ACA1_058120	NW_004457442.1	255536	257686	R	encoded by transcript ACA1_058120A; uncharacterized protein	complement(255536..257686)	Acanthamoeba castellanii str. Neff	14918434
ACA1_058130	CDS	ACA1_058130	NW_004457442.1	257868	258293	R	encoded by transcript ACA1_058130A; uncharacterized protein	complement(join(257868..258121,258179..258293))	Acanthamoeba castellanii str. Neff	14918435
ACA1_058140	CDS	ACA1_058140	NW_004457442.1	258395	259842	D	encoded by transcript ACA1_058140A; Sarp-3, putative	join(258395..258784,258864..258902,258999..259084,259174..259429,259573..259842)	Acanthamoeba castellanii str. Neff	14918436
ACA1_058150	CDS	ACA1_058150	NW_004457442.1	260169	261203	D	encoded by transcript ACA1_058150A; oxidoreductase, putative	join(260169..260337,260402..260541,260607..260735,260808..260886,260992..261203)	Acanthamoeba castellanii str. Neff	14918437
ACA1_058160	CDS	ACA1_058160	NW_004457442.1	261395	261808	R	encoded by transcript ACA1_058160A; homeobox domain containing protein	complement(join(261395..261682,261782..261808))	Acanthamoeba castellanii str. Neff	14918438
ACA1_058170	CDS	ACA1_058170	NW_004457442.1	262517	264265	D	encoded by transcript ACA1_058170A; SET domain containing protein	join(262517..263284,263367..263487,263572..263676,263775..264120,264193..264265)	Acanthamoeba castellanii str. Neff	14918439
ACA1_058180	CDS	ACA1_058180	NW_004457442.1	264374	265635	R	encoded by transcript ACA1_058180A; uncharacterized protein	complement(join(264374..264529,264608..264791,264879..265263,265413..265635))	Acanthamoeba castellanii str. Neff	14918440
ACA1_058190	CDS	ACA1_058190	NW_004457442.1	265912	268761	R	encoded by transcript ACA1_058190A; leucine rich repeat domain containing protein	complement(join(265912..265989,266096..266863,267098..267325,267388..267478,267556..267680,267763..268761))	Acanthamoeba castellanii str. Neff	14918441
ACA1_058200	CDS	ACA1_058200	NW_004457442.1	268990	270397	D	encoded by transcript ACA1_058200A; methyltransferase domain containing protein	join(268990..269131,269224..269298,269386..269493,269513..269656,269743..269816,269882..269984,270083..270209,270313..270397)	Acanthamoeba castellanii str. Neff	14918442
ACA1_058210	CDS	ACA1_058210	NW_004457442.1	270441	272946	R	encoded by transcript ACA1_058210A; Fbox domain containing protein	complement(join(270441..270454,270550..270675,270764..270905,270978..271053,271187..271347,271433..271567,271665..271821,272016..272088,272217..272304,272397..272459,272764..272946))	Acanthamoeba castellanii str. Neff	14918443
ACA1_058220	CDS	ACA1_058220	NW_004457442.1	273136	274409	D	encoded by transcript ACA1_058220A; uncharacterized protein	join(273136..273140,273231..273589,273652..274409)	Acanthamoeba castellanii str. Neff	14918444
ACA1_058230	CDS	ACA1_058230	NW_004457442.1	274547	276858	R	encoded by transcript ACA1_058230A; uncharacterized protein	complement(join(274547..274646,274725..274817,274918..276272,276401..276480,276560..276695,276766..276858))	Acanthamoeba castellanii str. Neff	14918445
ACA1_058240	CDS	ACA1_058240	NW_004457442.1	277218	281629	D	encoded by transcript ACA1_058240A; WD domain, G-beta repeat-containing protein	join(277218..277288,277359..277494,277577..277728,277795..278001,278070..278202,278273..278452,278565..279165,279264..279322,279396..279511,279609..279700,279846..279971,280062..280180,280290..280362,280466..280661,280748..280891,280958..281057,281156..281629)	Acanthamoeba castellanii str. Neff	14918446
ACA1_058250	CDS	ACA1_058250	NW_004457442.1	282277	282865	D	encoded by transcript ACA1_058250A; uncharacterized protein	join(282277..282602,282664..282865)	Acanthamoeba castellanii str. Neff	14918447
ACA1_058260	CDS	ACA1_058260	NW_004457442.1	282985	284461	R	encoded by transcript ACA1_058260A; oxidoreductase, putative	complement(join(282985..283325,283431..283550,283674..283696,283812..284461))	Acanthamoeba castellanii str. Neff	14918514
ACA1_058270	CDS	ACA1_058270	NW_004457442.1	285301	286215	D	encoded by transcript ACA1_058270A; Ubox domain containing protein	join(285301..285351,285419..285579,285658..285779,285853..285900,285984..286099,286165..>286215)	Acanthamoeba castellanii str. Neff	14918515
ACA1_058280	CDS	ACA1_058280	NW_004457442.1	286439	288586	R	encoded by transcript ACA1_058280A; opioid growth factor receptor (ogfr) region protein, putative	complement(join(286439..286913,287041..287200,287293..287420,287555..287616,287767..287856,287987..288078,288232..288586))	Acanthamoeba castellanii str. Neff	14918516
ACA1_058290	CDS	ACA1_058290	NW_004457442.1	288778	290464	D	encoded by transcript ACA1_058290A; glycosyl transferase	join(288778..289066,289182..289805,289893..290464)	Acanthamoeba castellanii str. Neff	14918517
ACA1_058300	CDS	ACA1_058300	NW_004457442.1	290928	297418	D	encoded by transcript ACA1_058300A; RhoGEF domain containing protein	join(290928..291693,291832..292124,292212..292257,292387..293154,293258..293296,293388..293563,293707..294463,294636..294773,294887..295008,295143..295229,295291..295356,295476..295583,295713..295820,295906..296064,296157..296219,296328..296463,296687..296820,297113..297418)	Acanthamoeba castellanii str. Neff	14918518
ACA1_058310	CDS	ACA1_058310	NW_004457442.1	297675	298598	D	encoded by transcript ACA1_058310A; uncharacterized protein	join(297675..297875,297918..298598)	Acanthamoeba castellanii str. Neff	14918519
ACA1_058320	CDS	ACA1_058320	NW_004457442.1	298820	300166	D	encoded by transcript ACA1_058320A; GPR1/FUN34/yaaH family protein	join(298820..298949,299102..299236,299333..299449,299535..299688,299760..299907,299987..300166)	Acanthamoeba castellanii str. Neff	14918520
ACA1_058330	CDS	ACA1_058330	NW_004457442.1	300575	301054	D	encoded by transcript ACA1_058330A; uncharacterized protein	join(<300575..300666,300724..301054)	Acanthamoeba castellanii str. Neff	14918521
ACA1_058340	CDS	ACA1_058340	NW_004457442.1	301433	303755	R	encoded by transcript ACA1_058340A; Ser/Thr phosphatase family superfamily protein	complement(join(301433..301857,301929..302056,302126..302265,302293..302382,302484..302546,302630..302737,302844..302929,303017..303138,303227..303384,303458..303574,303636..303755))	Acanthamoeba castellanii str. Neff	14918522
ACA1_058350	CDS	ACA1_058350	NW_004457442.1	303862	308893	D	encoded by transcript ACA1_058350A; LsmAD domain containing protein	join(303862..304179,304285..304395,304503..304644,304741..304840,304935..305049,305145..305266,305350..305750,305817..305942,306145..306257,306354..306456,306531..307069,307131..307188,307275..307459,307490..307501,307578..307706,307781..308185,308282..308401,308478..308774,308843..308893)	Acanthamoeba castellanii str. Neff	14918523
ACA1_058360	CDS	ACA1_058360	NW_004457442.1	309167	310778	R	encoded by transcript ACA1_058360A; uncharacterized protein	complement(join(309167..310188,310293..310395,310467..310743,310771..310778))	Acanthamoeba castellanii str. Neff	14918524
ACA1_058370	CDS	ACA1_058370	NW_004457442.1	312090	315472	D	encoded by transcript ACA1_058370A; Myblike DNA-binding domain containing protein	join(312090..312183,312308..312504,312600..312940,313014..313445,313555..313734,313831..313883,313985..314261,314349..314424,314510..315308,315393..315472)	Acanthamoeba castellanii str. Neff	14918525
ACA1_058380	CDS	ACA1_058380	NW_004457442.1	315838	316588	D	encoded by transcript ACA1_058380A; uncharacterized protein	join(315838..315920,315994..316195,316283..316588)	Acanthamoeba castellanii str. Neff	14918526
ACA1_058390	CDS	ACA1_058390	NW_004457442.1	316740	317467	R	encoded by transcript ACA1_058390A; uncharacterized protein	complement(join(316740..316938,317066..317085,317153..317467))	Acanthamoeba castellanii str. Neff	14918527
ACA1_058400	CDS	ACA1_058400	NW_004457442.1	317673	318401	R	encoded by transcript ACA1_058400A; uncharacterized protein	complement(join(317673..317978,318066..318240,318310..318401))	Acanthamoeba castellanii str. Neff	14918528
ACA1_058410	CDS	ACA1_058410	NW_004457442.1	318734	319454	R	encoded by transcript ACA1_058410A; uncharacterized protein	complement(join(318734..319039,319113..319329,319360..319454))	Acanthamoeba castellanii str. Neff	14918529
ACA1_058420	CDS	ACA1_058420	NW_004457442.1	319719	322122	D	encoded by transcript ACA1_058420A; Fbox domain containing protein	join(319719..319796,319894..320010,320109..320177,320310..320465,320549..320641,320743..320903,321045..321189,321314..321418,321484..321764,321858..322122)	Acanthamoeba castellanii str. Neff	14918530
ACA1_058430	CDS	ACA1_058430	NW_004457442.1	322236	322784	R	encoded by transcript ACA1_058430A; uncharacterized protein	complement(join(322236..322529,322623..322784))	Acanthamoeba castellanii str. Neff	14918531
ACA1_058440	CDS	ACA1_058440	NW_004457442.1	323330	324933	R	encoded by transcript ACA1_058440A; Fbox domain containing protein	complement(join(323330..323672,323820..323909,323988..324072,324091..324178,324253..324343,324460..324590,324811..324933))	Acanthamoeba castellanii str. Neff	14918532
ACA1_058450	CDS	ACA1_058450	NW_004457442.1	325147	327111	R	encoded by transcript ACA1_058450A; Zndependent dipeptidase	complement(join(325147..325333,325413..325569,325725..325889,325966..326067,326189..326375,326479..326717,326829..327111))	Acanthamoeba castellanii str. Neff	14918533
ACA1_058460	CDS	ACA1_058460	NW_004457442.1	327499	328016	D	encoded by transcript ACA1_058460A; uncharacterized protein	join(327499..327673,327925..328016)	Acanthamoeba castellanii str. Neff	14918534
ACA1_058470	CDS	ACA1_058470	NW_004457442.1	328708	329488	D	encoded by transcript ACA1_058470A; uncharacterized protein	join(328708..328764,328825..329004,329064..329084,329136..329189,329225..329488)	Acanthamoeba castellanii str. Neff	14918069
ACA1_058480	CDS	ACA1_058480	NW_004457442.1	330542	330829	D	encoded by transcript ACA1_058480A; uncharacterized protein	330542..330829	Acanthamoeba castellanii str. Neff	14918070
ACA1_058490	CDS	ACA1_058490	NW_004457442.1	332039	333685	D	encoded by transcript ACA1_058490A; uncharacterized protein	join(332039..332395,332761..332934,333011..333089,333240..333382,333458..333685)	Acanthamoeba castellanii str. Neff	14918071
ACA1_058500	CDS	ACA1_058500	NW_004457442.1	334054	335699	R	encoded by transcript ACA1_058500A; phenylalanyl-tRNA synthetase beta subunit, putative	complement(join(334054..334235,334350..334755,334855..335174,335516..335699))	Acanthamoeba castellanii str. Neff	14918072
ACA1_058510	CDS	ACA1_058510	NW_004457442.1	336428	338198	D	encoded by transcript ACA1_058510A; SPRY domain containing ran-binding protein	join(336428..336493,336598..337662,337808..337979,338065..338198)	Acanthamoeba castellanii str. Neff	14918073
ACA1_058520	CDS	ACA1_058520	NW_004457442.1	338934	342273	R	encoded by transcript ACA1_058520A; protein kinase domain containing protein	complement(join(338934..339096,339215..339616,339690..339837,340011..340111,340257..340324,340425..340534,340646..340828,340960..341038,341136..341200,341278..341932,342190..342273))	Acanthamoeba castellanii str. Neff	14918074
ACA1_058530	CDS	ACA1_058530	NW_004457442.1	343370	346552	D	encoded by transcript ACA1_058530A; Fbox domain containing protein	join(343370..343909,344007..344047,344069..344153,344181..344287,344404..344621,344741..344834,344965..345095,345240..345371,345479..345630,345779..345914,346013..346122,346229..346552)	Acanthamoeba castellanii str. Neff	14918075
ACA1_058540	CDS	ACA1_058540	NW_004457442.1	346743	347593	R	encoded by transcript ACA1_058540A; 2oxoglutarate and iron-dependent oxygenase domain containing protein 2, putative	complement(join(346743..346865,346955..347593))	Acanthamoeba castellanii str. Neff	14918076
ACA1_058550	CDS	ACA1_058550	NW_004457442.1	347847	349933	R	encoded by transcript ACA1_058550A; uncharacterized protein	complement(join(347847..347946,348042..348189,348272..348428,348520..348571,348665..348784,348885..349933))	Acanthamoeba castellanii str. Neff	14918077
ACA1_058560	CDS	ACA1_058560	NW_004457442.1	350192	352890	R	encoded by transcript ACA1_058560A; protein phosphatase 2C domain containing protein	complement(join(350192..350338,350440..350556,350643..350749,350824..351030,351139..351267,351415..351561,351654..352409,352607..352717,352836..352890))	Acanthamoeba castellanii str. Neff	14918078
ACA1_058570	CDS	ACA1_058570	NW_004457442.1	353806	355615	R	encoded by transcript ACA1_058570A; leucine rich repeat domain containing protein	complement(join(353806..354646,354782..354884,355065..355162,355260..355615))	Acanthamoeba castellanii str. Neff	14918079
ACA1_058580	CDS	ACA1_058580	NW_004457442.1	355982	356278	D	encoded by transcript ACA1_058580A; uncharacterized protein	355982..356278	Acanthamoeba castellanii str. Neff	14918080
ACA1_058590	CDS	ACA1_058590	NW_004457442.1	356560	359711	D	encoded by transcript ACA1_058590A; copine VIII, putative	join(356560..356627,356785..356895,357023..357084,357172..357319,357422..357508,357590..357646,357715..357797,357898..358025,358149..358282,358353..358548,358628..358705,358819..358908,358994..359144,359289..359462,359566..359711)	Acanthamoeba castellanii str. Neff	14918081
ACA1_058700	CDS	ACA1_058700	NW_004457442.1	360285	361720	D	encoded by transcript ACA1_058700A; uncharacterized protein	join(<360285..360866,360938..361132,361213..361472,361555..361720)	Acanthamoeba castellanii str. Neff	14918082
ACA1_058710	CDS	ACA1_058710	NW_004457442.1	362101	362696	R	encoded by transcript ACA1_058710A; Sphase kinase-associated protein, putative	complement(join(362101..362421,362538..362696))	Acanthamoeba castellanii str. Neff	14918083
ACA1_058720	CDS	ACA1_058720	NW_004457442.1	363092	364136	R	encoded by transcript ACA1_058720A; uncharacterized protein	complement(join(363092..363174,363270..363360,363455..363582,363682..363804,363920..364136))	Acanthamoeba castellanii str. Neff	14918084
ACA1_058730	CDS	ACA1_058730	NW_004457442.1	364339	365839	D	encoded by transcript ACA1_058730A; tetratricopeptide repeat domain containing protein	join(364339..364504,364608..364743,364772..364990,365112..365236,365324..365373,365460..365546,365627..365839)	Acanthamoeba castellanii str. Neff	14918085
ACA1_058740	CDS	ACA1_058740	NW_004457442.1	366518	371499	D	encoded by transcript ACA1_058740A; ATPcitrate synthase	join(366518..366811,366916..367089,367175..367351,367438..367827,367904..368089,368387..368490,368572..369433,369501..369845,370129..370384,370614..370761,370851..370936,371036..371226,371320..371499)	Acanthamoeba castellanii str. Neff	14918086
ACA1_058750	CDS	ACA1_058750	NW_004457442.1	372453	376310	D	encoded by transcript ACA1_058750A; Nucleotide excision repair protein, putative	join(372453..372572,372652..372843,372927..373036,373139..373261,373385..373479,373623..373719,373810..373913,373975..374167,374311..374465,374569..374668,374753..374836,374960..375053,375187..375302,375620..375803,375904..376008,376092..376310)	Acanthamoeba castellanii str. Neff	14918087
ACA1_058760	CDS	ACA1_058760	NW_004457442.1	376550	377632	D	encoded by transcript ACA1_058760A; coproporphyrinogen III oxidase, aerobic, putative	376550..377632	Acanthamoeba castellanii str. Neff	14918088
ACA1_058770	CDS	ACA1_058770	NW_004457442.1	377911	378716	R	encoded by transcript ACA1_058770A; ribosomal L15, putative	complement(join(377911..378156,378238..378529,378563..378602,378713..378716))	Acanthamoeba castellanii str. Neff	14918089
ACA1_058780	CDS	ACA1_058780	NW_004457442.1	378893	381427	R	encoded by transcript ACA1_058780A; G proteincoupled receptor, putative	complement(join(378893..379043,379173..379297,379405..379516,379610..379683,379756..379848,379933..380021,380128..380194,380268..380397,380453..380565,380662..380732,380814..380921,381008..381108,381219..381427))	Acanthamoeba castellanii str. Neff	14918090
ACA1_058790	CDS	ACA1_058790	NW_004457442.1	381694	383451	R	encoded by transcript ACA1_058790A; GDPassociated inhibitor, putative	complement(join(381694..381877,381976..382120,382224..382495,382578..382643,382710..382818,382884..383108,383202..383451))	Acanthamoeba castellanii str. Neff	14918091
ACA1_058800	CDS	ACA1_058800	NW_004457442.1	383725	384980	D	encoded by transcript ACA1_058800A; mitochondrial 2oxodicarboxylate carrier 1, putative	join(383725..383806,383872..383998,384191..384833,384948..384980)	Acanthamoeba castellanii str. Neff	14918321
ACA1_058810	CDS	ACA1_058810	NW_004457442.1	385471	387036	D	encoded by transcript ACA1_058810A; Inositol3-phosphate synthase	385471..387036	Acanthamoeba castellanii str. Neff	14918322
ACA1_058820	CDS	ACA1_058820	NW_004457442.1	388253	389619	D	encoded by transcript ACA1_058820A; cytochrome b-like heme/steroid binding domain containing protein	join(388253..388276,388370..388451,388545..388656,389037..389262,389392..389619)	Acanthamoeba castellanii str. Neff	14918323
ACA1_058830	CDS	ACA1_058830	NW_004457442.1	389781	390949	R	encoded by transcript ACA1_058830A; uncharacterized protein	complement(join(389781..390005,390272..390346,390459..390536,390595..390643,390713..390794,390877..390949))	Acanthamoeba castellanii str. Neff	14918324
ACA1_058840	CDS	ACA1_058840	NW_004457442.1	391235	394044	R	encoded by transcript ACA1_058840A; heat shock protein gp96, putative	complement(join(391235..392263,392345..392653,392746..393402,393493..393824,393975..394044))	Acanthamoeba castellanii str. Neff	14918325
ACA1_058850	CDS	ACA1_058850	NW_004457442.1	394434	396684	R	encoded by transcript ACA1_058850A; chaperone protein DnaK, putative	complement(join(394434..395667,395788..396465,396587..396684))	Acanthamoeba castellanii str. Neff	14918326
ACA1_058860	CDS	ACA1_058860	NW_004457442.1	397035	398200	R	encoded by transcript ACA1_058860A; ribosomal protein L15, putative	complement(join(397035..397187,397294..397495,397621..397784,397913..398200))	Acanthamoeba castellanii str. Neff	14918327
ACA1_058880	CDS	ACA1_058880	NW_004457442.1	400787	401702	D	encoded by transcript ACA1_058880A; uncharacterized protein	join(400787..400922,400993..401073,401135..401182,401293..401702)	Acanthamoeba castellanii str. Neff	14918329
ACA1_058890	CDS	ACA1_058890	NW_004457442.1	401868	404141	R	encoded by transcript ACA1_058890A; Signal transducer and activator of transcription STAT family protein	complement(join(401868..402219,402317..402428,402537..402669,402736..403131,403319..403907,404041..404141))	Acanthamoeba castellanii str. Neff	14918330
ACA1_058900	CDS	ACA1_058900	NW_004457442.1	405673	407788	R	encoded by transcript ACA1_058900A; tetratricopeptide repeat domain containing protein	complement(join(405673..405849,405964..406187,406267..406516,406580..406689,406954..407788))	Acanthamoeba castellanii str. Neff	14918331
ACA1_058910	CDS	ACA1_058910	NW_004457442.1	408375	409501	D	encoded by transcript ACA1_058910A; uncharacterized protein	join(408375..408402,408484..408942,409010..409184,409300..409501)	Acanthamoeba castellanii str. Neff	14918332
ACA1_058920	CDS	ACA1_058920	NW_004457442.1	409675	411142	R	encoded by transcript ACA1_058920A; uncharacterized protein	complement(join(409675..409897,410024..410597,410697..410847,410942..411142))	Acanthamoeba castellanii str. Neff	14918333
ACA1_058930	CDS	ACA1_058930	NW_004457442.1	411283	412483	R	encoded by transcript ACA1_058930A; uncharacterized protein	complement(join(411283..411493,411576..411687,411769..412233,412342..412483))	Acanthamoeba castellanii str. Neff	14918334
ACA1_058940	CDS	ACA1_058940	NW_004457442.1	412843	415664	R	encoded by transcript ACA1_058940A; TBC domain containing protein	complement(join(412843..412941,413019..413180,413313..413474,413612..413892,414030..414170,414283..414390,415079..415161,415332..415396,415653..415664))	Acanthamoeba castellanii str. Neff	14918335
ACA1_059050	CDS	ACA1_059050	NW_004457442.1	419665	421514	R	encoded by transcript ACA1_059050A; uncharacterized protein	complement(join(419665..420177,421020..421514))	Acanthamoeba castellanii str. Neff	14918336
ACA1_059160	CDS	ACA1_059160	NW_004457442.1	423402	423869	R	encoded by transcript ACA1_059160A; uncharacterized protein	complement(join(423402..423663,423793..423869))	Acanthamoeba castellanii str. Neff	14918337
ACA1_059170	CDS	ACA1_059170	NW_004457442.1	427097	428605	R	encoded by transcript ACA1_059170A; uncharacterized protein	complement(join(427097..427239,427362..427517,427579..427954,428125..428252,428314..428605))	Acanthamoeba castellanii str. Neff	14918338
ACA1_059280	CDS	ACA1_059280	NW_004457442.1	431901	432230	D	encoded by transcript ACA1_059280A; uncharacterized protein	join(431901..432068,432150..432230)	Acanthamoeba castellanii str. Neff	14918339
ACA1_059290	CDS	ACA1_059290	NW_004457442.1	435932	438208	D	encoded by transcript ACA1_059290A; LPS glycosyltransferase subfamily protein	435932..438208	Acanthamoeba castellanii str. Neff	14918340
ACA1_059300	CDS	ACA1_059300	NW_004457442.1	438337	439678	R	encoded by transcript ACA1_059300A; uncharacterized protein	complement(join(438337..438447,438556..438694,438816..438973,439095..439253,439380..439534,439618..439678))	Acanthamoeba castellanii str. Neff	14918341
ACA1_059310	CDS	ACA1_059310	NW_004457442.1	439820	442164	R	encoded by transcript ACA1_059310A; LPS glycosyltransferase subfamily protein	complement(join(439820..439843,440173..442164))	Acanthamoeba castellanii str. Neff	14918342
ACA1_059420	CDS	ACA1_059420	NW_004457442.1	442317	444608	R	encoded by transcript ACA1_059420A; LPS glycosyltransferase subfamily protein	complement(442317..444608)	Acanthamoeba castellanii str. Neff	14918343
ACA1_059430	CDS	ACA1_059430	NW_004457442.1	444829	446332	R	encoded by transcript ACA1_059430A; Sel1 domain containing protein	complement(join(444829..445899,445992..446052,446214..446332))	Acanthamoeba castellanii str. Neff	14918344
ACA1_059440	CDS	ACA1_059440	NW_004457442.1	446607	448187	R	encoded by transcript ACA1_059440A; uncharacterized protein	complement(join(446607..446708,446870..447520,447589..447903,447984..448187))	Acanthamoeba castellanii str. Neff	14918345
ACA1_059450	CDS	ACA1_059450	NW_004457442.1	448310	449997	D	encoded by transcript ACA1_059450A; DHHC zinc finger domain containing protein	join(448310..448603,448758..448869,449216..449349,449455..449699,449775..449818,449921..449997)	Acanthamoeba castellanii str. Neff	14917834
ACA1_059460	CDS	ACA1_059460	NW_004457442.1	450241	450990	D	encoded by transcript ACA1_059460A; ribosomal protein L13e, putative	join(450241..450483,450589..450990)	Acanthamoeba castellanii str. Neff	14917835
ACA1_059470	CDS	ACA1_059470	NW_004457442.1	451305	452583	D	encoded by transcript ACA1_059470A; Gpatch domain containing protein	join(451305..451470,451533..451576,451645..451721,451784..451928,452026..452241,452330..452409,452517..452583)	Acanthamoeba castellanii str. Neff	14917836
ACA1_059480	CDS	ACA1_059480	NW_004457442.1	452968	453705	D	encoded by transcript ACA1_059480A; uncharacterized protein	join(452968..453066,453169..453266,453345..453454,453548..453705)	Acanthamoeba castellanii str. Neff	14917837
ACA1_059490	CDS	ACA1_059490	NW_004457442.1	454046	455056	D	encoded by transcript ACA1_059490A; saposin B domain containing protein	join(454046..454156,454267..454329,454365..454425,454503..454613,454704..454898,454977..455056)	Acanthamoeba castellanii str. Neff	14917838
ACA1_059500	CDS	ACA1_059500	NW_004457442.1	455387	457747	D	encoded by transcript ACA1_059500A; LPS glycosyltransferase subfamily protein	455387..457747	Acanthamoeba castellanii str. Neff	14917839
ACA1_059510	CDS	ACA1_059510	NW_004457442.1	457869	459047	R	encoded by transcript ACA1_059510A; EF hand domain containing protein	complement(join(457869..458082,458164..458311,458462..458627,458788..458867,458960..459047))	Acanthamoeba castellanii str. Neff	14917840
ACA1_059520	CDS	ACA1_059520	NW_004457442.1	459347	461511	R	encoded by transcript ACA1_059520A; dihydropyrimidinase	complement(join(459347..459733,459857..460033,460136..460303,460377..460562,460632..460906,460997..461107,461240..461355,461450..461511))	Acanthamoeba castellanii str. Neff	14917841
ACA1_059530	CDS	ACA1_059530	NW_004457442.1	461633	462389	R	encoded by transcript ACA1_059530A; uncharacterized protein	complement(join(461633..461764,461852..461942,462118..462217,462293..462389))	Acanthamoeba castellanii str. Neff	14917842
ACA1_059540	CDS	ACA1_059540	NW_004457442.1	462844	464896	D	encoded by transcript ACA1_059540A; peptidase D, putative	join(462844..462871,463012..463310,463421..463534,463650..463983,464052..464353,464439..464691,464769..464896)	Acanthamoeba castellanii str. Neff	14917843
ACA1_059550	CDS	ACA1_059550	NW_004457442.1	465077	465940	D	encoded by transcript ACA1_059550A; hydrolase, NUDIX domain containing protein	join(465077..465576,465778..465940)	Acanthamoeba castellanii str. Neff	14917844
ACA1_059560	CDS	ACA1_059560	NW_004457442.1	466741	467508	D	encoded by transcript ACA1_059560A; uncharacterized protein	466741..467508	Acanthamoeba castellanii str. Neff	14917845
ACA1_059570	CDS	ACA1_059570	NW_004457442.1	467851	474877	D	encoded by transcript ACA1_059570A; FGGAP repeat domain containing protein	join(467851..468017,468101..468488,468603..468774,468886..469116,469226..469403,469562..470256,470522..470623,470758..470994,471063..471248,471391..472005,472086..472276,472375..472770,472910..473217,473301..473518,473601..473738,473816..474150,474227..474877)	Acanthamoeba castellanii str. Neff	14917846
ACA1_059580	CDS	ACA1_059580	NW_004457442.1	474958	480579	D	encoded by transcript ACA1_059580A; uncharacterized protein	join(474958..474969,475138..475663,475784..476781,476889..477046,477132..478965,479058..479329,479379..480579)	Acanthamoeba castellanii str. Neff	14917847
ACA1_059590	CDS	ACA1_059590	NW_004457442.1	480974	493514	R	encoded by transcript ACA1_059590A; FGGAP repeat domain containing protein	complement(join(480974..482177,482287..482537,482641..483006,483088..483945,484048..484402,484521..484612,484720..485717,485843..486929,487006..487340,487418..487555,487656..487873,487966..488273,488525..488932,489011..489201,489331..489984,490052..490237,490330..490566,490687..490741,490754..490903,490968..491733,491888..492065,492164..492394,492544..492715,492844..493231,493348..493514))	Acanthamoeba castellanii str. Neff	14917848
ACA1_059600	CDS	ACA1_059600	NW_004457442.1	494398	496711	D	encoded by transcript ACA1_059600A; uncharacterized protein	join(494398..494473,494582..494705,494799..494908,495131..496362,496373..496711)	Acanthamoeba castellanii str. Neff	14917849
ACA1_059610	CDS	ACA1_059610	NW_004457442.1	496773	499665	R	encoded by transcript ACA1_059610A; uncharacterized protein	complement(join(496773..497332,497455..497538,497619..497707,497849..498079,498173..498254,498328..498451,498563..498679,498789..499114,499200..499390,499472..499665))	Acanthamoeba castellanii str. Neff	14917850
ACA1_059620	CDS	ACA1_059620	NW_004457442.1	499867	500130	D	encoded by transcript ACA1_059620A; uncharacterized protein	499867..>500130	Acanthamoeba castellanii str. Neff	14917851
ACA1_059730	CDS	ACA1_059730	NW_004457442.1	503403	503567	R	encoded by transcript ACA1_059730A; uncharacterized protein	complement(<503403..503567)	Acanthamoeba castellanii str. Neff	14917852
ACA1_059740	CDS	ACA1_059740	NW_004457442.1	504053	506223	R	encoded by transcript ACA1_059740A; Tcomplex protein 1, eta subunit	complement(join(504053..504898,504985..505149,505265..505436,505528..505712,505822..506079,506209..506223))	Acanthamoeba castellanii str. Neff	14917853
ACA1_059750	CDS	ACA1_059750	NW_004457442.1	506408	509497	D	encoded by transcript ACA1_059750A; CBLinteracting protein kinase, putative	join(506408..506532,506727..506790,507063..507135,507199..507377,507505..507582,507662..507728,507846..507898,507974..508016,508124..508205,508305..508353,508486..508553,508671..508757,508857..508941,509048..509194,509312..509412,509464..509497)	Acanthamoeba castellanii str. Neff	14917854
ACA1_059760	CDS	ACA1_059760	NW_004457442.1	510568	512424	D	encoded by transcript ACA1_059760A; Chaperone protein dnaJ, putative	join(510568..510977,511140..511293,511471..512424)	Acanthamoeba castellanii str. Neff	14917855
ACA1_059770	CDS	ACA1_059770	NW_004457442.1	512556	515553	R	encoded by transcript ACA1_059770A; nuclear protein SET family protein, putative	complement(join(512556..512783,512875..512985,513085..513252,513332..513433,513577..513687,513780..513992,514160..514441,514629..514727,514836..514886,514960..515042,515144..515195,515276..515411,515486..515553))	Acanthamoeba castellanii str. Neff	14917856
ACA1_059780	CDS	ACA1_059780	NW_004457442.1	515645	516333	R	encoded by transcript ACA1_059780A; uncharacterized protein	complement(join(515645..515661,515675..516117,516257..516333))	Acanthamoeba castellanii str. Neff	14917857
ACA1_059790	CDS	ACA1_059790	NW_004457442.1	516511	517669	R	encoded by transcript ACA1_059790A; uncharacterized protein	complement(join(516511..516678,516970..517095,517316..517351,517380..517507,517552..517669))	Acanthamoeba castellanii str. Neff	14917858
ACA1_059800	CDS	ACA1_059800	NW_004457442.1	517765	520272	D	encoded by transcript ACA1_059800A; uncharacterized protein	join(517765..517816,517977..518071,518202..518287,518419..518545,518637..518778,518859..519130,519227..519294,519427..519500,519595..519648,519882..519938,520015..520056,520138..520220,520237..520272)	Acanthamoeba castellanii str. Neff	14917859
ACA1_059810	CDS	ACA1_059810	NW_004457442.1	520591	523204	D	encoded by transcript ACA1_059810A; uncharacterized protein	join(520591..521830,522075..522170,522262..522840,522981..523204)	Acanthamoeba castellanii str. Neff	14917860
ACA1_059820	CDS	ACA1_059820	NW_004457442.1	523434	528883	D	encoded by transcript ACA1_059820A; uncharacterized protein	join(523434..523530,523620..523696,523771..523812,523904..524000,524099..524217,524335..524450,524553..524709,524844..524926,525019..525099,525193..525333,525389..525444,525558..525648,525768..525870,525965..526057,526223..526409,526497..526666,526803..526913,526994..527167,527271..527435,527578..527673,527785..527980,528048..528119,528203..528390,528487..528651,528758..528883)	Acanthamoeba castellanii str. Neff	14917861
ACA1_059830	CDS	ACA1_059830	NW_004457442.1	529077	533522	R	encoded by transcript ACA1_059830A; lipase	complement(join(529077..529154,529318..529394,529545..529701,529805..529977,530266..530338,530444..530631,530739..531900,532016..532154,532269..532396,532513..532652,532788..532975,533089..533522))	Acanthamoeba castellanii str. Neff	14917862
ACA1_059840	CDS	ACA1_059840	NW_004457442.1	534186	538882	D	encoded by transcript ACA1_059840A; phosphoenolpyruvate carboxylase	join(534186..534329,534471..534565,534678..534874,534959..535047,535166..535249,535404..535500,535561..535710,535821..535899,535993..536200,536295..536539,536676..536739,536866..536935,537012..537074,537168..537347,537446..537795,537893..538197,538348..538465,538584..538679,538766..538882)	Acanthamoeba castellanii str. Neff	14917863
ACA1_059850	CDS	ACA1_059850	NW_004457442.1	539145	540595	R	encoded by transcript ACA1_059850A; uncharacterized protein	complement(join(539145..539236,539316..539367,539570..539689,539812..539931,540095..540595))	Acanthamoeba castellanii str. Neff	14917864
ACA1_059860	CDS	ACA1_059860	NW_004457442.1	540881	545039	D	encoded by transcript ACA1_059860A; RNA recognition motif domain containing protein	join(540881..542167,542251..542511,542663..542774,542847..543036,543132..543214,543304..543774,543858..543934,544012..544344,544423..544608,544671..545039)	Acanthamoeba castellanii str. Neff	14917865
ACA1_059870	CDS	ACA1_059870	NW_004457442.1	545801	551340	D	encoded by transcript ACA1_059870A; purine nucleoside phosphorylase	join(545801..545830,546147..546368,546505..546709,546794..546851,547010..547140,547314..547378,547723..547900,548013..548153,548300..548461,548563..548698,548828..548980,549178..549257,549388..549506,549698..549784,549963..550076,550211..550324,550440..550591,550690..550765,550868..550982,551117..551340)	Acanthamoeba castellanii str. Neff	14917866
ACA1_059980	CDS	ACA1_059980	NW_004457442.1	552000	556517	R	encoded by transcript ACA1_059980A; von Willebrand factor type A domain containing protein	complement(join(552000..552285,552367..552511,552685..552795,552973..553363,553483..553625,553699..553884,554009..554117,554288..554353,554508..554600,554712..554846,555003..555174,555313..555361,555449..555494,555573..555709,555804..556070,556166..556517))	Acanthamoeba castellanii str. Neff	14917867
ACA1_059990	CDS	ACA1_059990	NW_004457442.1	557004	558941	D	encoded by transcript ACA1_059990A; actine, putative	join(557004..557081,557190..557337,557541..557665,557747..557812,557924..557972,558116..558208,558329..558436,558528..558645,558707..558807,558895..558941)	Acanthamoeba castellanii str. Neff	14917868
ACA1_060000	CDS	ACA1_060000	NW_004457442.1	559239	560156	R	encoded by transcript ACA1_060000A; uncharacterized protein	complement(559239..560156)	Acanthamoeba castellanii str. Neff	14917869
ACA1_060010	CDS	ACA1_060010	NW_004457442.1	560468	561790	D	encoded by transcript ACA1_060010A; MIR domain containing protein	join(560468..560741,560916..560976,561083..561185,561319..561411,561525..561656,561743..561790)	Acanthamoeba castellanii str. Neff	14917870
ACA1_060020	CDS	ACA1_060020	NW_004457442.1	561900	563699	R	encoded by transcript ACA1_060020A; WD repeat containing protein	complement(join(561900..562028,562106..562214,562327..562435,562522..562589,562698..562796,562908..562984,563115..563220,563306..563426,563609..563699))	Acanthamoeba castellanii str. Neff	14917871
ACA1_060030	CDS	ACA1_060030	NW_004457442.1	563878	566418	D	encoded by transcript ACA1_060030A; thioredoxin domain containing protein	join(563878..564020,564117..564176,564320..564418,564556..564639,564746..564848,564967..565355,565409..565520,565643..565711,565806..565889,565972..566055,566125..566418)	Acanthamoeba castellanii str. Neff	14917872
ACA1_060040	CDS	ACA1_060040	NW_004457442.1	566821	571332	D	encoded by transcript ACA1_060040A; papain family cysteine protease	join(566821..566971,567173..567303,567556..567641,567726..567771,567876..567942,568017..568137,568218..568413,568505..568661,568742..568883,568991..569046,569119..569337,569399..569610,569688..569831,569934..570175,570287..570560,570638..571096,571177..571332)	Acanthamoeba castellanii str. Neff	14917873
ACA1_060050	CDS	ACA1_060050	NW_004457442.1	571477	572469	R	encoded by transcript ACA1_060050A; uncharacterized protein	complement(join(571477..571719,571835..571912,572083..572469))	Acanthamoeba castellanii str. Neff	14918367
ACA1_060060	CDS	ACA1_060060	NW_004457442.1	574495	575145	R	encoded by transcript ACA1_060060A; RETRotransposonlike family member	complement(574495..575145)	Acanthamoeba castellanii str. Neff	14918368
ACA1_060070	CDS	ACA1_060070	NW_004457442.1	575267	576073	R	encoded by transcript ACA1_060070A; uncharacterized protein	complement(join(575267..575770,575810..576073))	Acanthamoeba castellanii str. Neff	14918369
ACA1_060080	CDS	ACA1_060080	NW_004457442.1	576871	577972	R	encoded by transcript ACA1_060080A; uncharacterized protein	complement(join(576871..577482,577522..577579,577605..577972))	Acanthamoeba castellanii str. Neff	14918370
ACA1_060090	CDS	ACA1_060090	NW_004457442.1	578750	580577	R	encoded by transcript ACA1_060090A; uncharacterized protein	complement(join(578750..578775,578886..579024,579197..579430,579505..579653,579847..579856,579954..580118,580206..580241,580374..580577))	Acanthamoeba castellanii str. Neff	14918371
ACA1_060100	CDS	ACA1_060100	NW_004457442.1	580794	586054	D	encoded by transcript ACA1_060100A; DENN (AEX3) domain containing protein	join(580794..580869,580999..581116,581207..581251,581565..581642,581726..581951,582116..582280,582438..582603,582689..583071,583161..583286,583423..583514,583617..583678,583776..583939,584018..584099,584198..584909,585062..585188,585261..585584,585717..585905,586031..586054)	Acanthamoeba castellanii str. Neff	14918372
ACA1_060110	CDS	ACA1_060110	NW_004457442.1	586587	588336	D	encoded by transcript ACA1_060110A; uncharacterized protein	join(586587..587048,587145..587237,587362..588336)	Acanthamoeba castellanii str. Neff	14918373
ACA1_060120	CDS	ACA1_060120	NW_004457442.1	589012	589513	D	encoded by transcript ACA1_060120A; uncharacterized protein	join(589012..589070,589168..589250,589324..589412,589487..589513)	Acanthamoeba castellanii str. Neff	14918374
ACA1_060130	CDS	ACA1_060130	NW_004457442.1	590074	594386	R	encoded by transcript ACA1_060130A; BTB/POZ domain containing protein	complement(join(590074..590364,590468..590689,590768..590894,591065..591162,591311..591493,591612..591783,591856..592098,592245..592434,592550..592708,592817..592855,593007..593172,593245..593319,593567..593613,593692..593803,593960..594069,594293..594386))	Acanthamoeba castellanii str. Neff	14918375
ACA1_060140	CDS	ACA1_060140	NW_004457442.1	594741	596008	D	encoded by transcript ACA1_060140A; uncharacterized protein	join(594741..594803,594856..594930,594993..595092,595165..595289,595376..595423,595714..595771,595884..596008)	Acanthamoeba castellanii str. Neff	14918376
ACA1_060150	CDS	ACA1_060150	NW_004457442.1	596270	598455	D	encoded by transcript ACA1_060150A; uncharacterized protein	join(596270..596620,596813..596937,597106..597276,597372..597453,597558..597657,597753..598052,598159..598247,598327..598455)	Acanthamoeba castellanii str. Neff	14918377
ACA1_060160	CDS	ACA1_060160	NW_004457442.1	598528	601861	R	encoded by transcript ACA1_060160A; lipase	complement(join(598528..599339,599444..599517,599528..599608,599643..599729,599850..599977,600114..600253,600322..600426,600484..601861))	Acanthamoeba castellanii str. Neff	14918378
ACA1_060170	CDS	ACA1_060170	NW_004457442.1	602264	606286	R	encoded by transcript ACA1_060170A; viral a-type inclusion protein repeat-containing protein	complement(602264..606286)	Acanthamoeba castellanii str. Neff	14918379
ACA1_060180	CDS	ACA1_060180	NW_004457442.1	606297	608055	R	encoded by transcript ACA1_060180A; uncharacterized protein	complement(join(606297..606596,606673..606757,606842..606931,607044..607088,607214..607328,607420..607502,607680..607819,607978..608055))	Acanthamoeba castellanii str. Neff	14918380
ACA1_060190	CDS	ACA1_060190	NW_004457442.1	608331	609712	D	encoded by transcript ACA1_060190A; Transmembrane protein, putative	join(608331..608482,608620..608716,608830..608912,609041..609129,609248..609409,609513..609712)	Acanthamoeba castellanii str. Neff	14918381
ACA1_060200	CDS	ACA1_060200	NW_004457442.1	609888	612794	R	encoded by transcript ACA1_060200A; uncharacterized protein	complement(join(609888..610100,610234..610379,610523..610711,610881..611051,611152..611251,611370..611459,611648..611991,612098..612384,612496..612625,612713..612794))	Acanthamoeba castellanii str. Neff	14918382
ACA1_060210	CDS	ACA1_060210	NW_004457442.1	613157	614502	D	encoded by transcript ACA1_060210A; ankyrin 2,3/unc44, putative	join(613157..613202,613310..613404,613493..613571,613669..613731,613866..614036,614174..614502)	Acanthamoeba castellanii str. Neff	14918383
ACA1_060220	CDS	ACA1_060220	NW_004457442.1	614827	621510	D	encoded by transcript ACA1_060220A; U5 small nuclear ribonucleoprotein helicase, putative	614827..621510	Acanthamoeba castellanii str. Neff	14918384
ACA1_060230	CDS	ACA1_060230	NW_004457442.1	623058	624803	D	encoded by transcript ACA1_060230A; uncharacterized protein	join(623058..623180,623354..623477,623572..624803)	Acanthamoeba castellanii str. Neff	14918385
ACA1_060240	CDS	ACA1_060240	NW_004457442.1	625182	626300	R	encoded by transcript ACA1_060240A; uncharacterized protein	complement(join(625182..626066,626271..626300))	Acanthamoeba castellanii str. Neff	14918386
ACA1_060250	CDS	ACA1_060250	NW_004457442.1	626467	628144	R	encoded by transcript ACA1_060250A; carbonate dehydratase, putative	complement(join(626467..626597,626698..626783,626907..627094,627215..627421,627466..627637,627774..627875,627984..628144))	Acanthamoeba castellanii str. Neff	14918387
ACA1_060260	CDS	ACA1_060260	NW_004457442.1	628275	632144	R	encoded by transcript ACA1_060260A; RFX DNAbinding domain containing protein	complement(join(628275..628708,628852..629318,629449..629560,629753..629919,630164..630262,630401..630467,630639..630721,630884..630975,631323..631492,631609..631685,631897..631986,632074..632144))	Acanthamoeba castellanii str. Neff	14917874
ACA1_060270	CDS	ACA1_060270	NW_004457442.1	632354	633735	R	encoded by transcript ACA1_060270A; uncharacterized protein	complement(join(632354..632676,632781..632963,633121..633471,633612..633735))	Acanthamoeba castellanii str. Neff	14917875
ACA1_060280	CDS	ACA1_060280	NW_004457442.1	633879	634749	R	encoded by transcript ACA1_060280A; uncharacterized protein	complement(join(633879..633975,633998..634060,634142..634234,634406..634749))	Acanthamoeba castellanii str. Neff	14917876
ACA1_060290	CDS	ACA1_060290	NW_004457442.1	636214	639123	D	encoded by transcript ACA1_060290A; Chaperone protein dnaJ, putative	join(636214..636716,636870..637045,637261..637444,637566..639123)	Acanthamoeba castellanii str. Neff	14917877
ACA1_060300	CDS	ACA1_060300	NW_004457442.1	639392	640901	D	encoded by transcript ACA1_060300A; F-box domain containing protein	join(639392..639465,639634..639922,640145..640255,640365..640461,640600..640901)	Acanthamoeba castellanii str. Neff	14917878
ACA1_060310	CDS	ACA1_060310	NW_004457442.1	640949	642126	D	encoded by transcript ACA1_060310A; uncharacterized protein	join(640949..641071,641236..641295,641452..641575,641675..642126)	Acanthamoeba castellanii str. Neff	14917879
ACA1_060320	CDS	ACA1_060320	NW_004457442.1	642203	646407	R	encoded by transcript ACA1_060320A; ABC transporter, ATPbinding domain containing protein	complement(join(642203..642347,642417..642551,642689..642760,642850..643487,643503..643559,643586..643621,643636..643744,643949..644018,644132..644267,644418..644484,644618..644734,644840..644941,645146..645224,645400..645472,645620..645729,645931..646008,646197..646407))	Acanthamoeba castellanii str. Neff	14917880
ACA1_060330	CDS	ACA1_060330	NW_004457442.1	646519	648900	R	encoded by transcript ACA1_060330A; leucine rich repeat domain containing protein	complement(join(646519..646714,646967..647078,647271..647480,647659..647733,647843..648036,648215..648316,648464..648900))	Acanthamoeba castellanii str. Neff	14917881
ACA1_060340	CDS	ACA1_060340	NW_004457442.1	649282	649993	D	encoded by transcript ACA1_060340A; uncharacterized protein	join(649282..649575,649694..649765,649871..649993)	Acanthamoeba castellanii str. Neff	14917882
ACA1_060350	CDS	ACA1_060350	NW_004457442.1	650906	656345	D	encoded by transcript ACA1_060350A; Rho GTPase activating protein, putative	join(<650906..650935,651105..652059,652263..652327,652498..652614,652713..652797,652955..653703,653854..653961,654068..655346,655478..655558,655702..656345)	Acanthamoeba castellanii str. Neff	14917883
ACA1_060360	CDS	ACA1_060360	NW_004457442.1	658687	660305	R	encoded by transcript ACA1_060360A; uncharacterized protein	complement(join(658687..658700,658734..658850,658919..658952,659107..659235,659355..659455,659553..659670,659776..659887,660247..>660305))	Acanthamoeba castellanii str. Neff	14917884
ACA1_060370	CDS	ACA1_060370	NW_004457442.1	661156	662874	R	encoded by transcript ACA1_060370A; uncharacterized protein	complement(join(661156..661188,661288..661403,661632..661716,661803..661858,661972..662083,662197..662286,662800..662874))	Acanthamoeba castellanii str. Neff	14917885
ACA1_060380	CDS	ACA1_060380	NW_004457442.1	662979	666163	R	encoded by transcript ACA1_060380A; uncharacterized protein	complement(join(662979..663121,663325..663405,663482..663689,663818..663950,664034..664444,664564..664618,664776..664872,664956..664993,665246..665424,665538..665803,665879..666163))	Acanthamoeba castellanii str. Neff	14917886
ACA1_060390	CDS	ACA1_060390	NW_004457442.1	666247	669328	R	encoded by transcript ACA1_060390A; Kelch motif family protein, putative	complement(join(666247..666405,666475..666807,666919..666992,667152..667277,667480..667562,667737..667812,667957..668145,668353..668499,668623..668781,668932..669096,669262..669328))	Acanthamoeba castellanii str. Neff	14917887
ACA1_060400	CDS	ACA1_060400	NW_004457442.1	669816	672765	D	encoded by transcript ACA1_060400A; CRAL/TRIO domain containing protein	join(669816..669917,670108..670260,670395..670548,670747..670828,671207..671274,671442..671533,671622..671750,671956..672100,672206..672312,672448..672585,672709..672765)	Acanthamoeba castellanii str. Neff	14917888
ACA1_060410	CDS	ACA1_060410	NW_004457442.1	672934	673255	R	encoded by transcript ACA1_060410A; uncharacterized protein	complement(join(672934..673059,673148..673255))	Acanthamoeba castellanii str. Neff	14917889
ACA1_060420	CDS	ACA1_060420	NW_004457442.1	673551	675405	R	encoded by transcript ACA1_060420A; DHHC zinc finger domain containing protein	complement(join(673551..673589,673706..673836,674151..674176,674313..674532,674630..674774,674971..675405))	Acanthamoeba castellanii str. Neff	14917890
ACA1_060430	CDS	ACA1_060430	NW_004457442.1	679809	680345	D	encoded by transcript ACA1_060430A; uncharacterized protein	join(679809..679979,680016..680345)	Acanthamoeba castellanii str. Neff	14917891
ACA1_060440	CDS	ACA1_060440	NW_004457442.1	680802	682522	R	encoded by transcript ACA1_060440A; glutathione Stransferase, putative	complement(join(680802..680837,681120..681276,681435..681554,681783..681924,682034..682086,682209..682522))	Acanthamoeba castellanii str. Neff	14917892
ACA1_060450	CDS	ACA1_060450	NW_004457442.1	682737	686597	D	encoded by transcript ACA1_060450A; phosphotransferase enzyme domain containing protein	join(682737..682904,683056..683400,683609..683728,683833..683934,684065..684131,684220..684309,684374..684593,684706..684780,684870..685255,685349..685451,685540..685634,685799..685833,685945..686026,686200..686597)	Acanthamoeba castellanii str. Neff	14917893
ACA1_060460	CDS	ACA1_060460	NW_004457442.1	686907	688125	D	encoded by transcript ACA1_060460A; uncharacterized protein	join(686907..687529,687687..688125)	Acanthamoeba castellanii str. Neff	14917894
ACA1_060470	CDS	ACA1_060470	NW_004457442.1	688248	690162	R	encoded by transcript ACA1_060470A; WD domain, G-beta repeat-containing protein	complement(join(688248..688667,688805..688939,689104..689247,689343..689563,689691..690162))	Acanthamoeba castellanii str. Neff	14918018
ACA1_060480	CDS	ACA1_060480	NW_004457442.1	690431	691843	R	encoded by transcript ACA1_060480A; uncharacterized protein	complement(join(690431..690608,690711..690807,690894..690972,691096..691554,691610..691843))	Acanthamoeba castellanii str. Neff	14918019
ACA1_060490	CDS	ACA1_060490	NW_004457442.1	691976	694325	R	encoded by transcript ACA1_060490A; Flavinbinding monooxygenase-like subfamily protein	complement(join(691976..692781,692797..692943,693047..693229,693380..693948,694042..694172,694230..694325))	Acanthamoeba castellanii str. Neff	14918020
ACA1_060500	CDS	ACA1_060500	NW_004457442.1	694413	695594	D	encoded by transcript ACA1_060500A; Actin, putative	694413..695594	Acanthamoeba castellanii str. Neff	14918021
ACA1_060510	CDS	ACA1_060510	NW_004457442.1	695979	699653	D	encoded by transcript ACA1_060510A; Mut protein	join(695979..696361,696492..696600,696700..696839,696976..697079,697189..697284,697404..697548,697835..698072,698196..698284,698404..698530,698629..698959,699093..699214,699309..699471,699571..699653)	Acanthamoeba castellanii str. Neff	14918022
ACA1_060520	CDS	ACA1_060520	NW_004457442.1	699913	701265	R	encoded by transcript ACA1_060520A; uncharacterized protein	complement(join(699913..700197,700284..700437,700586..701265))	Acanthamoeba castellanii str. Neff	14918023
ACA1_060530	CDS	ACA1_060530	NW_004457442.1	702111	703472	D	encoded by transcript ACA1_060530A; tetratricopeptide repeat domain containing protein	join(702111..702275,702351..702515,702622..702702,702839..702952,703113..703472)	Acanthamoeba castellanii str. Neff	14918024
ACA1_060540	CDS	ACA1_060540	NW_004457442.1	703635	705436	R	encoded by transcript ACA1_060540A; uncharacterized protein	complement(join(703635..704190,704440..704543,704634..705251,705371..705436))	Acanthamoeba castellanii str. Neff	14918025
ACA1_060550	CDS	ACA1_060550	NW_004457442.1	706240	707833	D	encoded by transcript ACA1_060550A; FAD dependent oxidoreductase	join(706240..706246,706338..706858,706914..707069,707255..707451,707507..707705,707780..707833)	Acanthamoeba castellanii str. Neff	14918026
ACA1_060560	CDS	ACA1_060560	NW_004457442.1	707901	708399	R	encoded by transcript ACA1_060560A; uncharacterized protein	complement(join(707901..708180,708272..708399))	Acanthamoeba castellanii str. Neff	14918027
ACA1_060570	CDS	ACA1_060570	NW_004457442.1	708810	709507	D	encoded by transcript ACA1_060570A; uncharacterized protein	join(708810..708882,708977..709109,709173..709272,709352..709507)	Acanthamoeba castellanii str. Neff	14918028
ACA1_060580	CDS	ACA1_060580	NW_004457442.1	709784	710884	R	encoded by transcript ACA1_060580A; phosphatase	complement(709784..710884)	Acanthamoeba castellanii str. Neff	14918029
ACA1_060590	CDS	ACA1_060590	NW_004457442.1	711176	712152	D	encoded by transcript ACA1_060590A; short chain dehydrogenase	join(711176..711932,712013..712152)	Acanthamoeba castellanii str. Neff	14918030
ACA1_060600	CDS	ACA1_060600	NW_004457442.1	712325	712893	R	encoded by transcript ACA1_060600A; uncharacterized protein	complement(join(712325..712423,712633..712893))	Acanthamoeba castellanii str. Neff	14918031
ACA1_060610	CDS	ACA1_060610	NW_004457442.1	713272	715628	D	encoded by transcript ACA1_060610A; Zinc finger protein	join(713272..713288,713361..713455,713524..713735,713813..714082,714302..714518,714615..714779,714875..715255,715315..715628)	Acanthamoeba castellanii str. Neff	14918032
ACA1_060620	CDS	ACA1_060620	NW_004457442.1	716310	719206	R	encoded by transcript ACA1_060620A; glutaminefructose-6-phosphate transaminase (isomerizing), putative	complement(join(716310..716393,716465..716685,716772..717038,717133..717301,717407..717558,717674..717796,717932..718024,718107..718365,718508..718600,718688..719206))	Acanthamoeba castellanii str. Neff	14918033
ACA1_060630	CDS	ACA1_060630	NW_004457442.1	719893	721551	R	encoded by transcript ACA1_060630A; 4Fe4S ferredoxin iron-sulfur binding domain containing protein	complement(join(719893..720087,720187..720314,720413..720515,720618..720779,720939..721126,721269..721395,721540..721551))	Acanthamoeba castellanii str. Neff	14918034
ACA1_060640	CDS	ACA1_060640	NW_004457442.1	721864	722788	R	encoded by transcript ACA1_060640A; ADPribosylation factor, putative	complement(join(721864..721969,722094..722203,722292..722381,722455..722638,722724..722788))	Acanthamoeba castellanii str. Neff	14918035
ACA1_060650	CDS	ACA1_060650	NW_004457442.1	722970	726856	D	encoded by transcript ACA1_060650A; serine/threonineprotein kinase	join(722970..723380,723611..724492,724623..724755,724876..724928,725020..725098,725211..725239,725350..725428,725518..725593,725681..725784,726019..726225,726304..726494,726608..726856)	Acanthamoeba castellanii str. Neff	14918036
ACA1_060660	CDS	ACA1_060660	NW_004457442.1	727090	728749	D	encoded by transcript ACA1_060660A; Endonuclease/Exonuclease/phosphatase family protein	join(727090..727185,727281..727366,727453..727514,727624..727829,727948..728023,728099..728174,728206..728397,728518..728607,728644..728749)	Acanthamoeba castellanii str. Neff	14918037
ACA1_060670	CDS	ACA1_060670	NW_004457442.1	728968	731499	D	encoded by transcript ACA1_060670A; dipeptidase	join(728968..729044,729280..729402,729518..729657,729788..729939,730035..730119,730228..730304,730373..730479,730555..730630,730721..730794,730930..731054,731163..731271,731373..731499)	Acanthamoeba castellanii str. Neff	14918038
ACA1_060680	CDS	ACA1_060680	NW_004457442.1	732012	732554	D	encoded by transcript ACA1_060680A; uncharacterized protein	732012..732554	Acanthamoeba castellanii str. Neff	14918039
ACA1_060690	CDS	ACA1_060690	NW_004457442.1	732943	733482	D	encoded by transcript ACA1_060690A; uncharacterized protein	732943..733482	Acanthamoeba castellanii str. Neff	14918261
ACA1_060700	CDS	ACA1_060700	NW_004457442.1	733935	734591	D	encoded by transcript ACA1_060700A; uncharacterized protein	733935..734591	Acanthamoeba castellanii str. Neff	14918262
ACA1_060710	CDS	ACA1_060710	NW_004457442.1	734768	737632	R	encoded by transcript ACA1_060710A; alcohol dehydrogenase	complement(join(734768..734920,735047..735176,735285..735403,735514..735615,735758..735848,735996..736057,736144..736332,736472..736594,736653..736728,736800..736920,737009..737163,737246..737441,737545..737632))	Acanthamoeba castellanii str. Neff	14918263
ACA1_060720	CDS	ACA1_060720	NW_004457442.1	737949	745035	R	encoded by transcript ACA1_060720A; IgA-specific serine endopeptidase, putative	complement(join(737949..740387,740401..740977,741116..742602,742660..743517,743548..743924,744000..745035))	Acanthamoeba castellanii str. Neff	14918264
ACA1_060740	CDS	ACA1_060740	NW_004457442.1	746580	749531	R	encoded by transcript ACA1_060740A; uncharacterized protein	complement(join(746580..747077,747090..747203,747413..748321,748454..748644,749288..749531))	Acanthamoeba castellanii str. Neff	14918265
ACA1_060750	CDS	ACA1_060750	NW_004457442.1	750907	759379	R	encoded by transcript ACA1_060750A; ubiquitin thiolesterase	complement(join(750907..751140,751357..751506,751615..752274,752359..752490,753711..753827,754014..754739,755040..755129,755555..756676,756779..757965,758064..758265,758370..758426,758437..758594,758678..758842,758977..759077,759193..759331,759367..759379))	Acanthamoeba castellanii str. Neff	14918266
ACA1_060860	CDS	ACA1_060860	NW_004457442.1	760128	764842	R	encoded by transcript ACA1_060860A; IgA-specific serine endopeptidase	complement(join(760128..761870,762022..762081,762092..762607,762643..762737,762843..762946,763050..763203,763281..763362,763643..763923,763988..764463,764541..764842))	Acanthamoeba castellanii str. Neff	14918267
ACA1_060870	CDS	ACA1_060870	NW_004457442.1	765198	765860	D	encoded by transcript ACA1_060870A; uncharacterized protein	765198..765860	Acanthamoeba castellanii str. Neff	14918268
ACA1_060880	CDS	ACA1_060880	NW_004457442.1	766527	767216	R	encoded by transcript ACA1_060880A; polyubiquitin, putative	complement(join(766527..766982,767010..767216))	Acanthamoeba castellanii str. Neff	14918269
ACA1_060890	CDS	ACA1_060890	NW_004457442.1	767538	773266	R	encoded by transcript ACA1_060890A; RasGEF domain containing protein	complement(join(767538..767686,767857..767979,768060..768390,768474..769057,769167..769253,769342..769468,769548..769825,769892..770003,770093..770939,771063..771164,771252..771465,771551..771778,771889..772416,772691..772794,773115..773266))	Acanthamoeba castellanii str. Neff	14918270
ACA1_060900	CDS	ACA1_060900	NW_004457442.1	773627	775212	R	encoded by transcript ACA1_060900A; uncharacterized protein	complement(join(773627..774784,774910..775212))	Acanthamoeba castellanii str. Neff	14918271
ACA1_060910	CDS	ACA1_060910	NW_004457442.1	775570	777471	R	encoded by transcript ACA1_060910A; uncharacterized protein	complement(join(775570..776202,776220..776912,776985..777361,777465..777471))	Acanthamoeba castellanii str. Neff	14918272
ACA1_060920	CDS	ACA1_060920	NW_004457442.1	778570	781721	R	encoded by transcript ACA1_060920A; transporter, major facilitator superfamily protein	complement(join(778570..778751,778838..778912,779009..779077,779185..779329,779534..779670,779834..779879,779952..780343,780404..780517,780570..780659,780829..780888,780994..781141,781238..781530,781652..781721))	Acanthamoeba castellanii str. Neff	14918273
ACA1_060930	CDS	ACA1_060930	NW_004457442.1	782233	784277	D	encoded by transcript ACA1_060930A; RFX DNAbinding domain containing protein	join(782233..782291,782461..782550,782618..782725,782873..784277)	Acanthamoeba castellanii str. Neff	14918274
ACA1_060940	CDS	ACA1_060940	NW_004457442.1	784418	786131	R	encoded by transcript ACA1_060940A; uncharacterized protein	complement(join(784418..784504,784584..785178,785328..785577,785690..786088,786107..786131))	Acanthamoeba castellanii str. Neff	14918275
ACA1_060950	CDS	ACA1_060950	NW_004457442.1	786784	787891	D	encoded by transcript ACA1_060950A; uncharacterized protein	join(786784..787614,787685..787891)	Acanthamoeba castellanii str. Neff	14918276
ACA1_060960	CDS	ACA1_060960	NW_004457442.1	788050	789030	R	encoded by transcript ACA1_060960A; DnaJ domain containing protein	complement(join(788050..788142,788179..789030))	Acanthamoeba castellanii str. Neff	14918277
ACA1_060970	CDS	ACA1_060970	NW_004457442.1	789221	792056	R	encoded by transcript ACA1_060970A; uncharacterized protein	complement(join(789221..789256,789514..789582,789674..789881,789956..790065,790226..790622,790710..790933,791014..791412,791589..791705,791814..792056))	Acanthamoeba castellanii str. Neff	14918278
ACA1_060980	CDS	ACA1_060980	NW_004457442.1	792182	792808	R	encoded by transcript ACA1_060980A; uncharacterized protein	complement(join(792182..792566,792717..792808))	Acanthamoeba castellanii str. Neff	14918279
ACA1_060990	CDS	ACA1_060990	NW_004457442.1	793154	795920	R	encoded by transcript ACA1_060990A; Ser/Thr phosphatase family superfamily protein	complement(join(793154..793259,793336..793412,793496..793644,793710..793799,793859..793948,793978..794075,794197..794301,794442..794624,794714..794812,794900..795001,795153..795203,795330..795423,795504..795684,795807..795920))	Acanthamoeba castellanii str. Neff	14918280
ACA1_061000	CDS	ACA1_061000	NW_004457442.1	796179	798185	R	encoded by transcript ACA1_061000A; uncharacterized protein	complement(join(796179..796250,796329..796498,796585..796689,796797..796926,797084..797173,797281..797379,797679..797736,797852..797940,798093..798185))	Acanthamoeba castellanii str. Neff	14918281
ACA1_061010	CDS	ACA1_061010	NW_004457442.1	798468	799056	R	encoded by transcript ACA1_061010A; Tim10/DDP family zinc finger superfamily protein	complement(join(798468..798530,798656..798761,798971..799056))	Acanthamoeba castellanii str. Neff	14918282
ACA1_061020	CDS	ACA1_061020	NW_004457442.1	799144	800305	R	encoded by transcript ACA1_061020A; cytosolic coat protein	complement(join(799144..799274,799341..799448,799523..799627,799710..799816,799878..799951,800147..>800305))	Acanthamoeba castellanii str. Neff	14917998
ACA1_061030	CDS	ACA1_061030	NW_004457442.1	801746	803846	D	encoded by transcript ACA1_061030A; uncharacterized protein	join(801746..801893,801988..802052,802214..802300,802383..803846)	Acanthamoeba castellanii str. Neff	14917999
ACA1_061040	CDS	ACA1_061040	NW_004457442.1	804177	806567	D	encoded by transcript ACA1_061040A; oxidoreductase family, NADbinding Rossmann fold domain containing protein	join(804177..804436,804520..804640,804818..804922,805036..805187,805285..805370,805585..805649,805717..805806,805913..806024,806106..806192,806283..806347,806430..806567)	Acanthamoeba castellanii str. Neff	14918000
ACA1_061050	CDS	ACA1_061050	NW_004457442.1	807038	808415	D	encoded by transcript ACA1_061050A; carbohydrate binding domain cbm49 protein	join(807038..807101,807193..808415)	Acanthamoeba castellanii str. Neff	14918001
ACA1_061060	CDS	ACA1_061060	NW_004457442.1	808578	810427	R	encoded by transcript ACA1_061060A; homocysteine smethyltransferase 1, putative	complement(join(808578..808639,808973..809136,809209..809363,809551..809693,809759..809843,810060..810220,810316..810427))	Acanthamoeba castellanii str. Neff	14918002
ACA1_061070	CDS	ACA1_061070	NW_004457442.1	810710	813388	D	encoded by transcript ACA1_061070A; uncharacterized protein	join(810710..810892,811033..811141,811214..811305,811438..811645,811880..811972,812089..812174,812293..812379,812447..812507,812628..812693,812798..812899,812986..813137,813242..813388)	Acanthamoeba castellanii str. Neff	14918003
ACA1_061080	CDS	ACA1_061080	NW_004457442.1	813652	815556	R	encoded by transcript ACA1_061080A; small GTPbinding protein	complement(join(813652..813754,813856..813978,814083..814381,814483..814578,814662..814805,814889..815019,815204..815375,815518..815556))	Acanthamoeba castellanii str. Neff	14918004
ACA1_061090	CDS	ACA1_061090	NW_004457442.1	815966	819703	D	encoded by transcript ACA1_061090A; glycosyl hydrolase family 47 protein	join(815966..816060,816145..816184,816282..816408,816509..816639,816756..816875,816975..817089,817220..817305,817384..817506,817570..817715,817823..817943,818026..818248,818375..818856,818996..819703)	Acanthamoeba castellanii str. Neff	14918005
ACA1_061100	CDS	ACA1_061100	NW_004457442.1	819800	821084	R	encoded by transcript ACA1_061100A; SEC13like protein	complement(join(819800..820169,820245..820437,820488..820577,820636..820740,820973..821084))	Acanthamoeba castellanii str. Neff	14918006
ACA1_061110	CDS	ACA1_061110	NW_004457442.1	821522	822449	R	encoded by transcript ACA1_061110A; uncharacterized protein	complement(join(821522..821719,821794..822071,822166..822256,822333..822449))	Acanthamoeba castellanii str. Neff	14918007
ACA1_061120	CDS	ACA1_061120	NW_004457442.1	822537	827634	R	encoded by transcript ACA1_061120A; leucine rich repeat domain containing protein	complement(join(822537..822640,822738..822855,822979..825449,825536..825601,825694..825828,825936..826005,826117..826203,826294..826372,826452..826800,826942..827005,827127..827205,827275..827355,827489..827634))	Acanthamoeba castellanii str. Neff	14918008
ACA1_061130	CDS	ACA1_061130	NW_004457442.1	828109	830180	R	encoded by transcript ACA1_061130A; GTPaseactivating protein	complement(join(828109..828186,828222..828410,828501..828573,828658..828754,828839..828996,829056..829154,829229..829406,829467..829579,829657..830180))	Acanthamoeba castellanii str. Neff	14918009
ACA1_061140	CDS	ACA1_061140	NW_004457442.1	831032	834184	R	encoded by transcript ACA1_061140A; WD domain, G-beta repeat-containing protein	complement(join(831032..831226,831329..831634,831710..831829,831959..832213,832315..833025,833353..833415,833693..834184))	Acanthamoeba castellanii str. Neff	14918010
ACA1_061150	CDS	ACA1_061150	NW_004457442.1	835048	842489	R	encoded by transcript ACA1_061150A; UBA/TSN domain containing protein	complement(join(835048..835271,835405..836185,836258..836773,836864..837026,837154..837418,837533..837695,837821..837923,838019..838295,838383..838958,839034..839357,839470..839893,840010..840124,840196..840426,840610..840710,840785..840844,840937..841340,841485..841839,841927..842215,842356..842489))	Acanthamoeba castellanii str. Neff	14918011
ACA1_061160	CDS	ACA1_061160	NW_004457442.1	842997	844174	R	encoded by transcript ACA1_061160A; WD repeatcontaining protein	complement(join(842997..843039,843133..843184,843406..843496,843574..843935,844024..844174))	Acanthamoeba castellanii str. Neff	14918012
ACA1_061170	CDS	ACA1_061170	NW_004457442.1	844437	845660	R	encoded by transcript ACA1_061170A; uncharacterized protein	complement(join(844437..844539,844645..844894,844999..845155,845448..845660))	Acanthamoeba castellanii str. Neff	14918013
ACA1_061180	CDS	ACA1_061180	NW_004457442.1	845962	848927	R	encoded by transcript ACA1_061180A; uncharacterized protein	complement(join(845962..846686,846763..846835,846918..847011,847123..847255,847326..847436,847526..848467,848539..848576,848644..848927))	Acanthamoeba castellanii str. Neff	14918014
ACA1_061190	CDS	ACA1_061190	NW_004457442.1	849074	850852	D	encoded by transcript ACA1_061190A; methyltransferase, putative	join(849074..849198,849278..849411,849483..849578,849684..849823,850048..850183,850262..850746,850823..850852)	Acanthamoeba castellanii str. Neff	14918015
ACA1_061200	CDS	ACA1_061200	NW_004457442.1	851011	853856	D	encoded by transcript ACA1_061200A; 5' nucleotidase family protein	join(851011..851116,851229..851374,851473..851578,851675..851779,851898..851977,852088..852162,852276..852400,852508..852656,852763..852971,853154..853352,853442..853548,853677..853856)	Acanthamoeba castellanii str. Neff	14918016
ACA1_061210	CDS	ACA1_061210	NW_004457442.1	853986	855664	D	encoded by transcript ACA1_061210A; oxidoreductase, putative	join(853986..854169,854248..854362,854466..854572,854706..854781,854861..855084,855171..855664)	Acanthamoeba castellanii str. Neff	14918017
ACA1_061220	CDS	ACA1_061220	NW_004457442.1	856109	856744	D	encoded by transcript ACA1_061220A; zinc finger, C3HC4 type (RING finger) domain containing protein	join(856109..856351,856451..856744)	Acanthamoeba castellanii str. Neff	14917958
ACA1_061230	CDS	ACA1_061230	NW_004457442.1	857338	859289	R	encoded by transcript ACA1_061230A; uncharacterized protein	complement(join(857338..857410,857515..859289))	Acanthamoeba castellanii str. Neff	14917959
ACA1_061240	CDS	ACA1_061240	NW_004457442.1	859418	866270	R	encoded by transcript ACA1_061240A; regulator of chromosome condensation (RCC1) repeat domain containing protein	complement(join(859418..859596,859667..859880,859961..860122,860186..860472,860689..860980,861070..861188,861299..861589,861684..861858,861999..862116,862190..862334,862410..862503,862581..862743,862844..863404,863476..863664,863738..863865,863948..864084,864153..864237,864332..864470,864575..864699,864802..864900,865020..865076,865163..865263,865343..866270))	Acanthamoeba castellanii str. Neff	14917960
ACA1_061250	CDS	ACA1_061250	NW_004457442.1	866517	867139	D	encoded by transcript ACA1_061250A; parvulintype peptidyl-prolyl cis/trans isomerase	join(866517..866602,866673..866748,866813..866886,866961..867032,867106..867139)	Acanthamoeba castellanii str. Neff	14917961
ACA1_061260	CDS	ACA1_061260	NW_004457442.1	867645	869467	D	encoded by transcript ACA1_061260A; IBR domain containing protein	join(867645..869205,869223..869467)	Acanthamoeba castellanii str. Neff	14917962
ACA1_061270	CDS	ACA1_061270	NW_004457442.1	869621	870345	R	encoded by transcript ACA1_061270A; uncharacterized protein	complement(join(869621..869798,869838..870177,870192..870345))	Acanthamoeba castellanii str. Neff	14917963
ACA1_061280	CDS	ACA1_061280	NW_004457442.1	870713	873410	D	encoded by transcript ACA1_061280A; Ras subfamily protein	join(870713..870780,870930..871031,871220..871350,871475..871535,871622..871731,871867..871988,872132..872284,872434..872575,872678..872721,872811..872845,872987..873071,873198..873410)	Acanthamoeba castellanii str. Neff	14917964
ACA1_061290	CDS	ACA1_061290	NW_004457442.1	873419	873625	D	encoded by transcript ACA1_061290A; uncharacterized protein	873419..873625	Acanthamoeba castellanii str. Neff	14917965
ACA1_061300	CDS	ACA1_061300	NW_004457442.1	873779	878106	R	encoded by transcript ACA1_061300A; RNA recognition motif domain containing protein	complement(join(873779..873917,874011..875001,875149..875292,875417..875561,875635..875904,876115..876172,876298..876447,876571..876662,876770..877238,877330..877899,878039..878106))	Acanthamoeba castellanii str. Neff	14917966
ACA1_061310	CDS	ACA1_061310	NW_004457442.1	878575	878955	R	encoded by transcript ACA1_061310A; uncharacterized protein	complement(join(878575..878866,878927..878955))	Acanthamoeba castellanii str. Neff	14917967
ACA1_061320	CDS	ACA1_061320	NW_004457442.1	879237	882369	D	encoded by transcript ACA1_061320A; uncharacterized protein	join(879237..879333,879398..879618,879746..880031,880092..880451,880573..880733,880822..880951,881047..881322,881396..881488,881575..881741,881847..882129,882269..882369)	Acanthamoeba castellanii str. Neff	14917968
ACA1_061330	CDS	ACA1_061330	NW_004457442.1	882484	884856	R	encoded by transcript ACA1_061330A; Alphagalactosidase	complement(join(882484..882550,882635..882752,882867..882974,883063..883186,883346..883506,883589..883639,883711..883746,883844..883949,884098..884231,884328..884380,884476..884542,884618..884639,884707..884856))	Acanthamoeba castellanii str. Neff	14917969
ACA1_061340	CDS	ACA1_061340	NW_004457442.1	885397	886189	R	encoded by transcript ACA1_061340A; uncharacterized protein	complement(join(885397..885566,885654..885784,885864..885960,886054..886189))	Acanthamoeba castellanii str. Neff	14917970
ACA1_061350	CDS	ACA1_061350	NW_004457442.1	886875	890174	D	encoded by transcript ACA1_061350A; acyltransferase domain containing protein	join(886875..887004,887067..887103,887276..887421,887532..887619,887759..887846,887935..888002,888142..888294,888368..888512,888593..888705,888786..888903,888974..889045,889183..889335,889432..889556,889649..889801,889883..890035,890126..890174)	Acanthamoeba castellanii str. Neff	14917971
ACA1_061370	CDS	ACA1_061370	NW_004457442.1	893285	899266	D	encoded by transcript ACA1_061370A; BTB/POZ domain containing protein	join(893285..894278,894389..894429,894611..894680,894807..894964,895045..895096,895211..895346,895542..895803,895937..896067,896154..896396,896653..896797,896886..897009,897155..897310,897389..897564,897759..897899,897971..898135,898240..898362,898522..898752,898889..899266)	Acanthamoeba castellanii str. Neff	14917973
ACA1_061390	CDS	ACA1_061390	NW_004457442.1	900082	912500	R	encoded by transcript ACA1_061390A; FATC domain containing protein	complement(join(900082..900284,900401..900766,900867..900999,901102..901293,901371..901486,901551..901689,901822..901926,901993..902108,902169..902523,902609..902730,902811..902930,903018..903221,903298..903438,903511..903688,903786..903842,903944..904200,904280..904497,904585..904739,904817..905048,905131..905394,905474..905591,905677..905813,905896..906075,906170..906306,906396..906578,906649..906887,906960..907207,907280..907503,907571..907732,907817..908040,908126..908329,908429..908974,909082..909196,909282..909479,909566..909679,909800..909927,910010..910222,910291..910438,910526..911367,911478..912309,912393..912500))	Acanthamoeba castellanii str. Neff	14917975
ACA1_061400	CDS	ACA1_061400	NW_004457442.1	912999	914717	R	encoded by transcript ACA1_061400A; uncharacterized protein	complement(join(912999..913056,913149..913251,913343..913564,913629..913817,913897..914070,914177..914338,914418..914526,914646..914717))	Acanthamoeba castellanii str. Neff	14917976
ACA1_061410	CDS	ACA1_061410	NW_004457442.1	914844	917610	D	encoded by transcript ACA1_061410A; EF hand domain containing protein	join(914844..914900,915155..915221,915302..915419,915520..915790,915872..916024,916266..916336,916509..916614,916703..916733,916831..916940,917023..917133,917242..917310,917383..917430,917512..917610)	Acanthamoeba castellanii str. Neff	14918472
ACA1_061420	CDS	ACA1_061420	NW_004457442.1	918272	926289	D	encoded by transcript ACA1_061420A; RhoGEF domain containing protein	join(<918272..918454,918553..918657,918736..918837,918952..919122,919216..919364,919426..919649,919727..919870,919935..920122,920219..920510,920577..920720,920835..921248,921340..921687,921776..922518,922609..922659,922969..923178,923263..923415,923586..923702,923813..923869,923948..924001,924062..924185,924283..924381,924498..924597,924687..924733,924816..924954,925098..925204,925319..925401,925562..925684,925791..925938,926016..926108,926195..926289)	Acanthamoeba castellanii str. Neff	14918473
ACA1_061430	CDS	ACA1_061430	NW_004457442.1	926397	927206	R	encoded by transcript ACA1_061430A; uncharacterized protein	complement(join(926397..926501,926622..926878,926900..927027,927094..927206))	Acanthamoeba castellanii str. Neff	14918474
ACA1_061440	CDS	ACA1_061440	NW_004457442.1	927336	931701	R	encoded by transcript ACA1_061440A; Texlike RNA-binding protein, putative	complement(join(927336..927442,927521..927707,927800..927965,928137..928507,928626..928770,928843..928985,929102..929158,929262..929328,929475..929851,929928..930047,930132..930257,930277..930364,930410..930483,930608..930739,930814..931701))	Acanthamoeba castellanii str. Neff	14918475
ACA1_061450	CDS	ACA1_061450	NW_004457442.1	932146	932433	D	encoded by transcript ACA1_061450A; uncharacterized protein	932146..932433	Acanthamoeba castellanii str. Neff	14918476
ACA1_061460	CDS	ACA1_061460	NW_004457442.1	932538	935051	R	encoded by transcript ACA1_061460A; leucine rich repeat domain containing protein	complement(join(932538..932652,932734..932956,933048..933185,933261..933377,933436..933545,933650..933776,933854..933991,934146..934356,934448..934597,934740..935051))	Acanthamoeba castellanii str. Neff	14918477
ACA1_061470	CDS	ACA1_061470	NW_004457442.1	935717	937265	R	encoded by transcript ACA1_061470A; TolA, putative	complement(join(935717..936026,936119..936960,937164..937265))	Acanthamoeba castellanii str. Neff	14918478
ACA1_061480	CDS	ACA1_061480	NW_004457442.1	937394	940028	R	encoded by transcript ACA1_061480A; RFX DNAbinding domain containing protein	complement(join(937394..938604,938715..938987,939235..939785,939994..940028))	Acanthamoeba castellanii str. Neff	14918479
ACA1_061490	CDS	ACA1_061490	NW_004457442.1	940357	942177	R	encoded by transcript ACA1_061490A; FHA domain containing protein	complement(join(940357..940417,940565..940590,940685..941267,941438..941501,941592..942177))	Acanthamoeba castellanii str. Neff	14918480
ACA1_061500	CDS	ACA1_061500	NW_004457442.1	942424	947805	D	encoded by transcript ACA1_061500A; NAD nucleotidase, putative	join(942424..942490,942597..942815,943019..943078,943251..943300,943401..943535,943653..943715,943799..943859,943924..944040,944130..944176,944265..944369,944467..944520,944647..944837,944917..945073,945207..945591,945681..945838,945996..946487,946644..946862,946947..947129,947324..947506,947659..947805)	Acanthamoeba castellanii str. Neff	14918481
ACA1_061510	CDS	ACA1_061510	NW_004457442.1	948216	953293	D	encoded by transcript ACA1_061510A; 5'nucleotidase, putative	join(948216..948273,948344..948565,948716..948825,948925..949128,949230..949290,949385..949498,949583..949782,949866..949949,950054..950157,950279..950462,950543..950794,950865..951042,951216..951496,951630..951716,951815..952030,952133..952219,952302..952520,952624..952806,952926..953108,953189..953293)	Acanthamoeba castellanii str. Neff	14918482
ACA1_061520	CDS	ACA1_061520	NW_004457442.1	953452	954008	D	encoded by transcript ACA1_061520A; small nuclear ribonucleoprotein e, putative	join(953452..953499,953595..953621,953693..953755,953874..954008)	Acanthamoeba castellanii str. Neff	14918483
ACA1_061530	CDS	ACA1_061530	NW_004457442.1	954159	955005	R	encoded by transcript ACA1_061530A; ribosomal protein L10, putative	complement(join(954159..954456,954535..954853,954996..955005))	Acanthamoeba castellanii str. Neff	14918484
ACA1_061540	CDS	ACA1_061540	NW_004457442.1	955381	960080	R	encoded by transcript ACA1_061540A; WD domain, G-beta repeat-containing protein	complement(join(955381..955838,955920..956004,956096..956559,956642..956801,956871..957059,957165..957299,957397..957530,957632..957771,957850..957920,958007..958221,958319..958508,958604..958856,958939..959033,959131..959194,959291..959412,959526..959591,959678..959804,959941..960080))	Acanthamoeba castellanii str. Neff	14918485
ACA1_061550	CDS	ACA1_061550	NW_004457442.1	960344	961261	D	encoded by transcript ACA1_061550A; 6hydroxy-D-nicotine oxidase	join(960344..960401,960481..960874,960956..961053,961113..961261)	Acanthamoeba castellanii str. Neff	14918486
ACA1_061560	CDS	ACA1_061560	NW_004457442.1	961356	962658	R	encoded by transcript ACA1_061560A; uncharacterized protein	complement(join(961356..962033,962253..962335,962439..962658))	Acanthamoeba castellanii str. Neff	14918487
ACA1_061570	CDS	ACA1_061570	NW_004457442.1	962931	964475	R	encoded by transcript ACA1_061570A; uncharacterized protein	complement(join(962931..963596,963681..963779,963855..963989,964070..964176,964244..964475))	Acanthamoeba castellanii str. Neff	14918488
ACA1_061580	CDS	ACA1_061580	NW_004457442.1	965253	966602	D	encoded by transcript ACA1_061580A; bZIP transcription factor domain containing protein	join(965253..965956,966065..966602)	Acanthamoeba castellanii str. Neff	14918489
ACA1_061590	CDS	ACA1_061590	NW_004457442.1	967095	969421	R	encoded by transcript ACA1_061590A; actinrelated protein Arp6, putative	complement(join(967095..967230,967338..967400,967492..967857,967952..968050,968119..968175,968265..968385,968517..968573,968699..968751,968845..968915,969011..969079,969164..969278,969351..969421))	Acanthamoeba castellanii str. Neff	14918490
ACA1_061600	CDS	ACA1_061600	NW_004457442.1	969508	973337	R	encoded by transcript ACA1_061600A; protein kinase domain containing protein	complement(join(969508..969606,969697..969803,969889..970007,970090..970164,970241..970283,970365..970491,970660..970787,970897..971038,971131..971229,971310..971389,971500..971632,971733..971862,971996..972096,972164..972297,972433..972519,972732..972837,972885..973337))	Acanthamoeba castellanii str. Neff	14917818
ACA1_061610	CDS	ACA1_061610	NW_004457442.1	973476	983750	R	encoded by transcript ACA1_061610A; Rap/ranGAP protein, putative	complement(join(973476..973601,973691..973843,973967..974110,974244..974366,974501..974661,974744..974852,974997..976252,976358..976541,976613..977150,977185..977255,977315..977738,977823..977978,978105..978252,978345..978444,978594..978797,978954..979097,979239..979462,979567..979798,979904..980021,980200..980670,980745..980831,980934..981070,981214..981243,981396..981517,981681..981801,981979..982055,982150..982372,982459..982548,982693..982818,982912..983012,983109..983251,983371..983750))	Acanthamoeba castellanii str. Neff	14917819
ACA1_061620	CDS	ACA1_061620	NW_004457442.1	984421	986100	R	encoded by transcript ACA1_061620A; strictosidine synthase	complement(join(984421..984566,984646..984786,985006..985160,985234..985397,985440..985522,985597..985699,985733..985858,985927..986100))	Acanthamoeba castellanii str. Neff	14917820
ACA1_061630	CDS	ACA1_061630	NW_004457442.1	986285	990025	D	encoded by transcript ACA1_061630A; poly(adpribose) glycohydrolase, putative	join(986285..986546,986637..986893,986996..987396,987539..987668,987760..987900,988024..988177,988292..988420,988518..988671,988797..988921,989010..989143,989237..989370,989461..989550,989608..989690,989763..990025)	Acanthamoeba castellanii str. Neff	14917821
ACA1_061640	CDS	ACA1_061640	NW_004457442.1	990624	992812	D	encoded by transcript ACA1_061640A; uncharacterized protein	join(990624..990734,990859..991014,991094..991176,991252..991355,991434..991601,991777..991918,992044..992146,992223..992278,992365..992470,992555..992812)	Acanthamoeba castellanii str. Neff	14917822
ACA1_061650	CDS	ACA1_061650	NW_004457442.1	992998	996542	R	encoded by transcript ACA1_061650A; homoaconitase, mitochondrial precursor, putative	complement(join(992998..993325,993406..993547,993625..993744,993864..993974,994068..994168,994250..994395,994507..994639,994725..994768,994937..995085,995294..995318,995392..995492,995579..995870,995995..996092,996157..996262,996393..996430,996470..996542))	Acanthamoeba castellanii str. Neff	14917823
ACA1_061660	CDS	ACA1_061660	NW_004457442.1	996784	997362	D	encoded by transcript ACA1_061660A; ribosomal L5P family Cterminus, putative	996784..997362	Acanthamoeba castellanii str. Neff	14917824
ACA1_061670	CDS	ACA1_061670	NW_004457442.1	997690	1003365	R	encoded by transcript ACA1_061670A; patched family protein	complement(join(997690..998798,998897..999024,999108..999237,999362..999525,999602..999687,999791..999846,999913..1000033,1000152..1000290,1000365..1000462,1000605..1001014,1001085..1001264,1001360..1001473,1001552..1001738,1001829..1001906,1002011..1002178,1002285..1002349,1002428..1002503,1002602..1002731,1002830..1002912,1003019..1003158,1003290..1003365))	Acanthamoeba castellanii str. Neff	14917825
ACA1_061680	CDS	ACA1_061680	NW_004457442.1	1004464	1010714	D	encoded by transcript ACA1_061680A; PH domain containing protein	join(1004464..1004866,1005023..1005114,1005216..1005263,1005346..1005471,1005716..1005752,1005827..1005900,1006122..1006190,1006314..1006389,1006488..1006536,1006608..1006713,1006845..1006967,1007072..1007150,1007261..1007350,1007419..1007515,1007593..1007673,1007955..1008006,1008130..1008229,1008315..1008718,1008815..1009569,1009661..1010082,1010168..1010291,1010402..1010714)	Acanthamoeba castellanii str. Neff	14917826
ACA1_061690	CDS	ACA1_061690	NW_004457442.1	1010805	1011988	D	encoded by transcript ACA1_061690A; 3' exoribonuclease family, domain 1 domain containing protein	join(1010805..1010910,1010991..1011104,1011209..1011309,1011436..1011542,1011588..1011666,1011785..1011988)	Acanthamoeba castellanii str. Neff	14917827
ACA1_061700	CDS	ACA1_061700	NW_004457442.1	1012206	1014401	D	encoded by transcript ACA1_061700A; amine oxidase family protein	join(1012206..1012396,1012519..1012685,1012752..1012847,1013008..1013194,1013366..1013449,1013523..1013591,1013686..1013822,1013922..1014099,1014194..1014401)	Acanthamoeba castellanii str. Neff	14917828
ACA1_061710	CDS	ACA1_061710	NW_004457442.1	1014805	1016539	D	encoded by transcript ACA1_061710A; uncharacterized protein	join(1014805..1015227,1015359..1015425,1015518..1015602,1015721..1016185,1016278..1016539)	Acanthamoeba castellanii str. Neff	14917829
ACA1_061730	CDS	ACA1_061730	NW_004457442.1	1024166	1026217	R	encoded by transcript ACA1_061730A; uncharacterized protein	complement(join(1024166..1025674,1025749..1025847,1025914..1025985,1026002..1026217))	Acanthamoeba castellanii str. Neff	14917831
ACA1_061740	CDS	ACA1_061740	NW_004457442.1	1026925	1032728	D	encoded by transcript ACA1_061740A; Sec7 and ankyrin domain containing protein	join(1026925..1028303,1028381..1029958,1030039..1030189,1030261..1030395,1030476..1030547,1030619..1030818,1030888..1030987,1031079..1031197,1031294..1031374,1031457..1031569,1031645..1031750,1031841..1031961,1032053..1032302,1032397..1032458,1032554..1032631,1032708..1032728)	Acanthamoeba castellanii str. Neff	14917832
ACA1_061750	CDS	ACA1_061750	NW_004457442.1	1033056	1033645	D	encoded by transcript ACA1_061750A; ribosomal protein S26e, putative	join(1033056..1033151,1033281..1033365,1033455..1033645)	Acanthamoeba castellanii str. Neff	14917833
ACA1_061760	CDS	ACA1_061760	NW_004457442.1	1033822	1036521	D	encoded by transcript ACA1_061760A; Serine protease precursor, putative	join(1033822..1034013,1034120..1034213,1034327..1034507,1034594..1034814,1034910..1035007,1035144..1035208,1035284..1035392,1035449..1035527,1035601..1035687,1035775..1035871,1035966..1036081,1036226..1036325,1036431..1036521)	Acanthamoeba castellanii str. Neff	14918222
ACA1_061770	CDS	ACA1_061770	NW_004457442.1	1036715	1039073	R	encoded by transcript ACA1_061770A; RabGAP/TBC domain containing protein	complement(join(1036715..1036856,1036966..1037029,1037091..1037231,1037355..1037430,1037513..1037625,1037729..1037840,1037979..1038044,1038120..1038254,1038363..1038433,1038543..1038680,1038794..1038891,1039006..1039073))	Acanthamoeba castellanii str. Neff	14918223
ACA1_061780	CDS	ACA1_061780	NW_004457442.1	1040105	1043650	D	encoded by transcript ACA1_061780A; Serine/threonine kinase	join(1040105..1040341,1040502..1040757,1040825..1040917,1040988..1041103,1041184..1041299,1041405..1041534,1041616..1041744,1041825..1041944,1042056..1042189,1042262..1042427,1042518..1042656,1042755..1043020,1043094..1043305,1043371..1043650)	Acanthamoeba castellanii str. Neff	14918224
ACA1_061790	CDS	ACA1_061790	NW_004457442.1	1043979	1045694	D	encoded by transcript ACA1_061790A; thiaminephosphate pyrophosphorylase	join(1043979..1044532,1044710..1044969,1045043..1045258,1045333..1045694)	Acanthamoeba castellanii str. Neff	14918225
ACA1_061800	CDS	ACA1_061800	NW_004457442.1	1045787	1047898	R	encoded by transcript ACA1_061800A; phosphomethylpyrimidine kinase	complement(join(1045787..1045907,1045991..1046448,1046581..1047614,1047706..1047898))	Acanthamoeba castellanii str. Neff	14918226
ACA1_061810	CDS	ACA1_061810	NW_004457442.1	1048135	1052029	D	encoded by transcript ACA1_061810A; peptidase family m1 domain containing protein	join(1048135..1048432,1048498..1048599,1048702..1048829,1048967..1049110,1049214..1049287,1049357..1049442,1049516..1049805,1049876..1050037,1050131..1050245,1050316..1050712,1050765..1050882,1050981..1051159,1051225..1051357,1051430..1051564,1051646..1051776,1051882..1052029)	Acanthamoeba castellanii str. Neff	14918227
ACA1_061830	CDS	ACA1_061830	NW_004457442.1	1053556	1058057	R	encoded by transcript ACA1_061830A; uncharacterized protein	complement(join(1053556..1053899,1053984..1054106,1054213..1054339,1054448..1054521,1054620..1054716,1054802..1054897,1055029..1055197,1055325..1055456,1055569..1055752,1055852..1056173,1056295..1056970,1057076..1057400,1057490..1057626,1057771..1057860,1058017..1058057))	Acanthamoeba castellanii str. Neff	14918229
ACA1_061840	CDS	ACA1_061840	NW_004457442.1	1058188	1061620	R	encoded by transcript ACA1_061840A; uncharacterized protein	complement(join(1058188..1058305,1058381..1059494,1059584..1059731,1059900..1059958,1060039..1060114,1060180..1060249,1060297..1060322,1060365..1060477,1060549..1060618,1060677..1060767,1060864..1060927,1061086..1061171,1061239..1061384,1061459..>1061620))	Acanthamoeba castellanii str. Neff	14918230
ACA1_061850	CDS	ACA1_061850	NW_004457442.1	1063277	1065206	D	encoded by transcript ACA1_061850A; nkyrin repeat and KH domain containing protein	join(1063277..1063330,1063358..1063903,1063970..1064158,1064227..1064423,1064501..1064661,1064740..1064910,1064982..1065099,1065161..1065206)	Acanthamoeba castellanii str. Neff	14918231
ACA1_061860	CDS	ACA1_061860	NW_004457442.1	1065452	1066896	D	encoded by transcript ACA1_061860A; Ap4A phosphorylase II, putative	join(1065452..1065715,1065790..1065857,1065950..1066109,1066179..1066285,1066359..1066548,1066618..1066896)	Acanthamoeba castellanii str. Neff	14918232
ACA1_061870	CDS	ACA1_061870	NW_004457442.1	1068690	1069548	D	encoded by transcript ACA1_061870A; shikimate kinase	join(1068690..1068720,1068804..1068932,1069009..1069166,1069264..1069341,1069426..1069548)	Acanthamoeba castellanii str. Neff	14918233
ACA1_061880	CDS	ACA1_061880	NW_004457442.1	1069710	1070376	R	encoded by transcript ACA1_061880A; cytidylate kinase	complement(join(1069710..1069882,1069968..1070376))	Acanthamoeba castellanii str. Neff	14918234
ACA1_061890	CDS	ACA1_061890	NW_004457442.1	1070695	1072632	R	encoded by transcript ACA1_061890A; dihydroorotate oxidase	complement(join(1070695..1070828,1070906..1071001,1071064..1071157,1071233..1071466,1071565..1071680,1071767..1071854,1071944..1072162,1072245..1072334,1072432..1072632))	Acanthamoeba castellanii str. Neff	14918235
ACA1_061900	CDS	ACA1_061900	NW_004457442.1	1072676	1075932	R	encoded by transcript ACA1_061900A; elongation factor Tu Cterminal domain containing protein	complement(join(1072676..1072934,1073043..1073163,1073399..1073541,1073610..1073764,1073855..1073918,1073995..1074126,1074214..1074373,1074466..1074598,1074680..1074877,1074961..1075032,1075140..1075231,1075469..1075566,1075676..1075932))	Acanthamoeba castellanii str. Neff	14918236
ACA1_061910	CDS	ACA1_061910	NW_004457442.1	1076446	1078183	D	encoded by transcript ACA1_061910A; ribosomal protein S18, putative	join(1076446..1076815,1076878..1077093,1077202..1077359,1077482..1077583,1077653..1078183)	Acanthamoeba castellanii str. Neff	14918237
ACA1_061920	CDS	ACA1_061920	NW_004457442.1	1078336	1079858	R	encoded by transcript ACA1_061920A; Rad23, putative	complement(join(1078336..1078425,1078506..1078595,1078682..1079152,1079242..1079703,1079790..1079858))	Acanthamoeba castellanii str. Neff	14918238
ACA1_061930	CDS	ACA1_061930	NW_004457442.1	1080183	1081570	R	encoded by transcript ACA1_061930A; transporter, major intrinsic protein (MIP) superfamily protein	complement(join(1080183..1080240,1080300..1080384,1080449..1080511,1080570..1080702,1080817..1080884,1080980..1081160,1081228..1081298,1081366..1081570))	Acanthamoeba castellanii str. Neff	14918239
ACA1_061940	CDS	ACA1_061940	NW_004457442.1	1081841	1082688	R	encoded by transcript ACA1_061940A; isochorismatase family superfamily protein	complement(join(1081841..1081906,1081985..1082082,1082149..1082266,1082389..1082688))	Acanthamoeba castellanii str. Neff	14918240
ACA1_061950	CDS	ACA1_061950	NW_004457442.1	1082897	1084006	R	encoded by transcript ACA1_061950A; steroid isomerase	complement(join(1082897..1083239,1083331..1083440,1083671..1084006))	Acanthamoeba castellanii str. Neff	14918241
ACA1_061960	CDS	ACA1_061960	NW_004457442.1	1084422	1088256	R	encoded by transcript ACA1_061960A; uncharacterized protein	complement(join(1084422..1085614,1085687..1086244,1086326..1086943,1087099..1087764,1088013..1088256))	Acanthamoeba castellanii str. Neff	14918117
ACA1_061970	CDS	ACA1_061970	NW_004457442.1	1088706	1091729	R	encoded by transcript ACA1_061970A; uncharacterized protein	complement(join(1088706..1089175,1089255..1089362,1089443..1089614,1089678..1089782,1090079..1090294,1090359..1090508,1090721..1090834,1090933..1091001,1091272..1091341,1091416..1091556,1091635..1091729))	Acanthamoeba castellanii str. Neff	14918118
ACA1_061980	CDS	ACA1_061980	NW_004457442.1	1092350	1093279	D	encoded by transcript ACA1_061980A; Fbox domain containing protein	join(1092350..1092531,1092603..1092694,1092765..1092866,1092948..1093017,1093087..1093279)	Acanthamoeba castellanii str. Neff	14918119
ACA1_061990	CDS	ACA1_061990	NW_004457442.1	1093451	1099264	D	encoded by transcript ACA1_061990A; RapGAP/RanGAP domain containing protein	join(1093451..1093502,1093622..1093677,1093814..1093927,1094011..1094136,1094208..1094578,1094692..1094784,1094855..1094925,1094999..1095203,1095287..1095388,1095466..1095757,1095848..1096022,1096122..1096271,1096388..1096512,1096623..1096697,1096809..1096950,1097048..1097179,1097310..1097378,1097471..1097525,1097621..1097841,1097930..1098038,1098157..1098280,1098357..1098411,1098484..1098521,1098570..1098656,1098758..1098913,1099139..1099264)	Acanthamoeba castellanii str. Neff	14918120
ACA1_062000	CDS	ACA1_062000	NW_004457442.1	1099602	1100663	R	encoded by transcript ACA1_062000A; lipase	complement(join(1099602..1100468,1100652..1100663))	Acanthamoeba castellanii str. Neff	14918121
ACA1_062010	CDS	ACA1_062010	NW_004457442.1	1101149	1102303	R	encoded by transcript ACA1_062010A; universal stress domain containing protein	complement(join(1101149..1101269,1101350..1101480,1101833..1102303))	Acanthamoeba castellanii str. Neff	14918122
ACA1_062020	CDS	ACA1_062020	NW_004457442.1	1102894	1105188	D	encoded by transcript ACA1_062020A; major vault protein alpha, putative	join(1102894..1102927,1103002..1103065,1103226..1103369,1103478..1103533,1103654..1103824,1103934..1104306,1104398..1104523,1104643..1104764,1104845..1105188)	Acanthamoeba castellanii str. Neff	14918123
ACA1_062030	CDS	ACA1_062030	NW_004457442.1	1104846	1107283	R	encoded by transcript ACA1_062030A; 3'5' exonuclease domain containing protein	complement(join(1104846..1104893,1104988..1105184,1105356..1105503,1105608..1105725,1105798..1106061,1106140..1106241,1106331..1106556,1106620..1106670,1106827..1107283))	Acanthamoeba castellanii str. Neff	14918124
ACA1_062040	CDS	ACA1_062040	NW_004457442.1	1107351	1108913	R	encoded by transcript ACA1_062040A; PPR repeat-containing protein	complement(join(1107351..1108161,1108249..1108407,1108515..1108773,1108850..1108913))	Acanthamoeba castellanii str. Neff	14918125
ACA1_062050	CDS	ACA1_062050	NW_004457442.1	1110053	1111692	D	encoded by transcript ACA1_062050A; chondroitinase B	join(1110053..1110195,1110275..1110771,1110840..1110910,1110979..1111692)	Acanthamoeba castellanii str. Neff	14918126
ACA1_062060	CDS	ACA1_062060	NW_004457442.1	1112057	1115901	D	encoded by transcript ACA1_062060A; protein phosphatase 2C domain containing protein	join(1112057..1112113,1112260..1112808,1112921..1112997,1113073..1113150,1113266..1113375,1113516..1113633,1114525..1114628,1114729..1114836,1114928..1115049,1115184..1115415,1115499..1115679,1115763..1115901)	Acanthamoeba castellanii str. Neff	14918127
ACA1_062070	CDS	ACA1_062070	NW_004457442.1	1113817	1114213	R	encoded by transcript ACA1_062070A; uncharacterized protein	complement(join(1113817..1114002,1114133..1114213))	Acanthamoeba castellanii str. Neff	14918128
ACA1_062080	CDS	ACA1_062080	NW_004457442.1	1116038	1117892	R	encoded by transcript ACA1_062080A; uncharacterized protein	complement(join(1116038..1116354,1116432..1116544,1116657..1116765,1116849..1117108,1117221..1117397,1117471..1117584,1117651..1117747,1117853..1117892))	Acanthamoeba castellanii str. Neff	14918129
ACA1_062090	CDS	ACA1_062090	NW_004457442.1	1118242	1120412	D	encoded by transcript ACA1_062090A; dihydrolipoamide dehydrogenase	join(1118242..1118355,1118412..1118458,1118534..1118627,1118708..1118798,1118885..1118971,1119038..1119120,1119196..1119390,1119463..1119567,1119648..1119875,1119952..1120044,1120107..1120412)	Acanthamoeba castellanii str. Neff	14918130
ACA1_062100	CDS	ACA1_062100	NW_004457442.1	1120546	1121055	R	encoded by transcript ACA1_062100A; ubiquitin B precursor isoform 2, putative	complement(join(1120546..1120560,1120649..1120752,1120842..1121055))	Acanthamoeba castellanii str. Neff	14918131
ACA1_062110	CDS	ACA1_062110	NW_004457442.1	1121329	1122884	R	encoded by transcript ACA1_062110A; endoribonuclease LPSP	complement(join(1121329..1121580,1121638..1122089,1122458..1122575,1122666..1122884))	Acanthamoeba castellanii str. Neff	14918132
ACA1_062120	CDS	ACA1_062120	NW_004457442.1	1123084	1125916	D	encoded by transcript ACA1_062120A; zinc finger, C3HC4 type (RING finger) domain containing protein	join(1123084..1123094,1123476..1123554,1123669..1123938,1124014..1124119,1124213..1124323,1124460..1124574,1124646..1124794,1124875..1125660,1125747..1125916)	Acanthamoeba castellanii str. Neff	14918133
ACA1_062130	CDS	ACA1_062130	NW_004457442.1	1126161	1127692	D	encoded by transcript ACA1_062130A; uncharacterized protein	join(1126161..1126354,1126444..1126506,1126597..1126711,1126800..1126865,1126984..1127085,1127168..1127350,1127418..1127490,1127628..1127692)	Acanthamoeba castellanii str. Neff	14918134
ACA1_062140	CDS	ACA1_062140	NW_004457442.1	1127583	1128388	R	encoded by transcript ACA1_062140A; uncharacterized protein	complement(join(1127583..1127688,1127767..1127826,1127961..1128388))	Acanthamoeba castellanii str. Neff	14918135
ACA1_062150	CDS	ACA1_062150	NW_004457442.1	1128559	1130653	R	encoded by transcript ACA1_062150A; Nacylsphingosine amidohydrolase, putative	complement(join(1128559..1128704,1128822..1129005,1129084..1129209,1129290..1129490,1129585..1129701,1129815..1129933,1130003..1130105,1130248..1130397,1130519..1130653))	Acanthamoeba castellanii str. Neff	14918136
ACA1_062160	CDS	ACA1_062160	NW_004457442.1	1130923	1133251	D	encoded by transcript ACA1_062160A; aminopeptidase p, nterminal domain containing protein	join(1130923..1130997,1131077..1131525,1131639..1131695,1131774..1131908,1131996..1132163,1132282..1132433,1132508..1132756,1132878..1132960,1133045..1133251)	Acanthamoeba castellanii str. Neff	14918137
ACA1_062170	CDS	ACA1_062170	NW_004457442.1	1133304	1134119	R	encoded by transcript ACA1_062170A; uncharacterized protein	complement(1133304..1134119)	Acanthamoeba castellanii str. Neff	14917915
ACA1_062180	CDS	ACA1_062180	NW_004457442.1	1134433	1135646	R	encoded by transcript ACA1_062180A; peptidase, S54 (rhomboid) subfamily protein	complement(join(1134433..1134693,1134782..1134910,1135013..1135104,1135179..1135272,1135341..1135646))	Acanthamoeba castellanii str. Neff	14917916
ACA1_062190	CDS	ACA1_062190	NW_004457442.1	1135847	1136598	D	encoded by transcript ACA1_062190A; uncharacterized protein	join(1135847..1135981,1136073..1136204,1136235..1136253,1136345..1136598)	Acanthamoeba castellanii str. Neff	14917917
ACA1_062200	CDS	ACA1_062200	NW_004457442.1	1136793	1138240	R	encoded by transcript ACA1_062200A; Ubiquitin fusion degradation protein 1, putative	complement(join(1136793..1137001,1137137..1137307,1137378..1137493,1137559..1137630,1137714..1137844,1137929..1138047,1138204..1138240))	Acanthamoeba castellanii str. Neff	14917918
ACA1_062210	CDS	ACA1_062210	NW_004457442.1	1138819	1140913	D	encoded by transcript ACA1_062210A; RNA pseudouridine synthase, putative	join(1138819..1138860,1138899..1139345,1139439..1139604,1139705..1139892,1139995..1140083,1140120..1140187,1140310..1140580,1140655..1140913)	Acanthamoeba castellanii str. Neff	14917919
ACA1_062220	CDS	ACA1_062220	NW_004457442.1	1141458	1142504	D	encoded by transcript ACA1_062220A; lipase, putative	join(1141458..1141994,1142040..1142504)	Acanthamoeba castellanii str. Neff	14917920
ACA1_062230	CDS	ACA1_062230	NW_004457442.1	1142671	1144447	R	encoded by transcript ACA1_062230A; C2 domain containing protein	complement(join(1142671..1143182,1143262..1143343,1143433..1143503,1143576..1143764,1143867..1144263,1144394..1144447))	Acanthamoeba castellanii str. Neff	14917921
ACA1_062240	CDS	ACA1_062240	NW_004457442.1	1144610	1148344	R	encoded by transcript ACA1_062240A; myotubularin, putative	complement(join(1144610..1144845,1144952..1145053,1145147..1145209,1145286..1146006,1146110..1146213,1146290..1146392,1146485..1146521,1146630..1146763,1146839..1146968,1147059..1147146,1147234..1147344,1147437..1147599,1147913..1148011,1148138..1148344))	Acanthamoeba castellanii str. Neff	14917922
ACA1_062250	CDS	ACA1_062250	NW_004457442.1	1149300	1150813	R	encoded by transcript ACA1_062250A; C2 and SH3 domain containing protein	complement(join(1149300..1149887,1149954..1150181,1150292..1150343,1150492..1150594,1150747..1150813))	Acanthamoeba castellanii str. Neff	14917923
ACA1_062260	CDS	ACA1_062260	NW_004457442.1	1150971	1154293	D	encoded by transcript ACA1_062260A; C2 domain containing protein	join(1150971..1151094,1151220..1151287,1151383..1151547,1151643..1151754,1151864..1152029,1152107..1152261,1152337..1152368,1152521..1152717,1152795..1152883,1152976..1153104,1153182..1153304,1153383..1153456,1153530..1153589,1153658..1153853,1153929..1154133,1154200..1154293)	Acanthamoeba castellanii str. Neff	14917924
ACA1_062270	CDS	ACA1_062270	NW_004457442.1	1154436	1156054	D	encoded by transcript ACA1_062270A; serine/threonineprotein phosphatase PP2A, putative	join(1154436..1154596,1154677..1154763,1154869..1154933,1155025..1155121,1155213..1155289,1155410..1155548,1155628..1155658,1155734..1155826,1155965..1156054)	Acanthamoeba castellanii str. Neff	14917925
ACA1_062280	CDS	ACA1_062280	NW_004457442.1	1156161	1157838	R	encoded by transcript ACA1_062280A; uncharacterized protein	complement(join(1156161..1156358,1156429..1156541,1156642..1156724,1156818..1156890,1156987..1157078,1157186..1157267,1157395..1157467,1157728..1157838))	Acanthamoeba castellanii str. Neff	14917926
ACA1_062290	CDS	ACA1_062290	NW_004457442.1	1157991	1158867	D	encoded by transcript ACA1_062290A; uncharacterized protein	join(1157991..1158184,1158267..1158476,1158579..1158686,1158801..1158867)	Acanthamoeba castellanii str. Neff	14917927
ACA1_062300	CDS	ACA1_062300	NW_004457442.1	1158952	1159515	D	encoded by transcript ACA1_062300A; transmembrane protein 93, putative	join(1158952..1159040,1159110..1159305,1159399..1159418,1159485..1159515)	Acanthamoeba castellanii str. Neff	14917928
ACA1_062310	CDS	ACA1_062310	NW_004457442.1	1159795	1160869	D	encoded by transcript ACA1_062310A; HIT zinc finger protein	join(1159795..1159843,1159915..1159986,1160080..1160216,1160266..1160320,1160413..1160488,1160596..1160703,1160767..1160869)	Acanthamoeba castellanii str. Neff	14917929
ACA1_062320	CDS	ACA1_062320	NW_004457442.1	1161094	1164132	D	encoded by transcript ACA1_062320A; Ubox domain containing protein	join(1161094..1161802,1161833..1162146,1162203..1162750,1162827..1163084,1163196..1163552,1163638..1163821,1163895..1163982,1164065..1164132)	Acanthamoeba castellanii str. Neff	14917930
ACA1_062330	CDS	ACA1_062330	NW_004457442.1	1164502	1167390	D	encoded by transcript ACA1_062330A; Sel1 repeat and Ubox domain containing protein	join(1164502..1165955,1166021..1166275,1166382..1166502,1166594..1166793,1166866..1167052,1167141..1167228,1167302..1167390)	Acanthamoeba castellanii str. Neff	14917931
ACA1_062340	CDS	ACA1_062340	NW_004457442.1	1167524	1168725	R	encoded by transcript ACA1_062340A; Ser/Thr phosphatase family superfamily protein	complement(join(1167524..1167702,1167769..1167968,1168046..1168092,1168223..1168279,1168357..1168725))	Acanthamoeba castellanii str. Neff	14917932
ACA1_062350	CDS	ACA1_062350	NW_004457442.1	1168945	1169722	D	encoded by transcript ACA1_062350A; glia maturation factor family protein	join(1168945..1168959,1169053..1169155,1169225..1169339,1169435..1169576,1169651..1169722)	Acanthamoeba castellanii str. Neff	14917933
ACA1_062360	CDS	ACA1_062360	NW_004457442.1	1170006	1170931	R	encoded by transcript ACA1_062360A; uncharacterized protein	complement(join(1170006..1170437,1170743..1170931))	Acanthamoeba castellanii str. Neff	14917934
ACA1_062370	CDS	ACA1_062370	NW_004457442.1	1171675	1173794	R	encoded by transcript ACA1_062370A; ADPribosylation factor subfamily protein	complement(join(1171675..1171836,1171961..1172047,1172255..1172364,1172865..1172942,1173036..1173114,1173223..1173334,1173399..1173480,1173581..1173721,1173791..1173794))	Acanthamoeba castellanii str. Neff	14917935
ACA1_062380	CDS	ACA1_062380	NW_004457442.1	1173916	1174878	R	encoded by transcript ACA1_062380A; uncharacterized protein	complement(join(1173916..1174359,1174430..1174547,1174640..1174878))	Acanthamoeba castellanii str. Neff	14917936
ACA1_062400	CDS	ACA1_062400	NW_004457442.1	1179547	1180113	D	encoded by transcript ACA1_062400A; Raslike protein rasS, putative	1179547..1180113	Acanthamoeba castellanii str. Neff	14918050
ACA1_062410	CDS	ACA1_062410	NW_004457442.1	1180349	1182892	R	encoded by transcript ACA1_062410A; vacuolar fusion protein ccz1 family protein	complement(join(1180349..1180401,1180477..1180607,1180692..1180752,1180821..1180894,1180970..1181112,1181215..1181302,1181376..1181480,1181617..1181660,1181698..1181770,1181876..1181923,1182002..1182246,1182335..1182457,1182536..1182653,1182723..1182892))	Acanthamoeba castellanii str. Neff	14918051
ACA1_062420	CDS	ACA1_062420	NW_004457442.1	1183217	1184143	R	encoded by transcript ACA1_062420A; lipase	complement(join(1183217..1183681,1183727..1184143))	Acanthamoeba castellanii str. Neff	14918052
ACA1_062430	CDS	ACA1_062430	NW_004457442.1	1185125	1187285	R	encoded by transcript ACA1_062430A; dual specificity phosphatase, putative	complement(join(1185125..1185256,1185343..1185392,1185468..1185515,1185581..1185648,1185721..1186474,1186550..1186621,1186686..1186791,1186883..1186941,1187029..1187120,1187197..1187285))	Acanthamoeba castellanii str. Neff	14918053
ACA1_062440	CDS	ACA1_062440	NW_004457442.1	1187470	1188333	D	encoded by transcript ACA1_062440A; uncharacterized protein	join(1187470..1187712,1187782..1188333)	Acanthamoeba castellanii str. Neff	14918054
ACA1_062450	CDS	ACA1_062450	NW_004457442.1	1188749	1191015	D	encoded by transcript ACA1_062450A; uncharacterized protein	join(1188749..1188856,1188898..1189350,1189434..1189554,1189641..1189944,1190009..1190079,1190161..1190305,1190373..1190447,1190519..1190711,1190968..1191015)	Acanthamoeba castellanii str. Neff	14918055
ACA1_062460	CDS	ACA1_062460	NW_004457442.1	1192400	1198964	D	encoded by transcript ACA1_062460A; uncharacterized protein	join(1192400..1192794,1192870..1192974,1193206..1193324,1193397..1193556,1193645..1194477,1194540..1194625,1194702..1195058,1195072..1195269,1195447..1195773,1195877..1195927,1196106..1196315,1196408..1196527,1196640..1196712,1196785..1197232,1197339..1197483,1197574..1197689,1197810..1197939,1198319..1198510,1198596..1198745,1198827..1198964)	Acanthamoeba castellanii str. Neff	14918056
ACA1_062470	CDS	ACA1_062470	NW_004457442.1	1199266	1201523	R	encoded by transcript ACA1_062470A; Nacyl phosphatidylethanolamine phospholipase D	complement(join(1199266..1199358,1199447..1199623,1199719..1199782,1199859..1200060,1200133..1200245,1200359..1200421,1200545..1200656,1200921..1201006,1201088..1201221,1201326..1201523))	Acanthamoeba castellanii str. Neff	14918057
ACA1_062480	CDS	ACA1_062480	NW_004457442.1	1201708	1204279	R	encoded by transcript ACA1_062480A; aspartate-tRNA ligase	complement(join(1201708..1201983,1202076..1202581,1202650..1202809,1202888..1203015,1203088..1203154,1203230..1203525,1203609..1203771,1203844..1203904,1203979..1204034,1204109..1204279))	Acanthamoeba castellanii str. Neff	14918058
ACA1_062490	CDS	ACA1_062490	NW_004457442.1	1204629	1205798	R	encoded by transcript ACA1_062490A; uncharacterized protein	complement(join(1204629..1204869,1204932..1205166,1205240..1205798))	Acanthamoeba castellanii str. Neff	14918059
ACA1_062500	CDS	ACA1_062500	NW_004457442.1	1206636	1207590	R	encoded by transcript ACA1_062500A; uncharacterized protein	complement(join(1206636..1206937,1207026..1207590))	Acanthamoeba castellanii str. Neff	14918060
ACA1_062510	CDS	ACA1_062510	NW_004457442.1	1208141	1209774	R	encoded by transcript ACA1_062510A; CDPalcohol phosphatidyltransferase superfamily protein	complement(join(1208141..1208474,1208562..1208715,1208804..1209026,1209153..1209410,1209499..1209774))	Acanthamoeba castellanii str. Neff	14918061
ACA1_062520	CDS	ACA1_062520	NW_004457442.1	1210486	1211428	D	encoded by transcript ACA1_062520A; uncharacterized protein	join(1210486..1210617,1210817..1211428)	Acanthamoeba castellanii str. Neff	14918062
ACA1_062530	CDS	ACA1_062530	NW_004457442.1	1211608	1217814	R	encoded by transcript ACA1_062530A; DNA polymerase (pol2), putative	complement(join(1211608..1211771,1211869..1211941,1212020..1212176,1212291..1212358,1212435..1212638,1212728..1212788,1212883..1212987,1213083..1213168,1213291..1213659,1213755..1213876,1213989..1214142,1214269..1214466,1214630..1214793,1214873..1214988,1215065..1215185,1215254..1215480,1215573..1215714,1215795..1215965,1216038..1216254,1216303..1216424,1216505..1216714,1216796..1216898,1216992..1217123,1217190..1217474,1217527..1217814))	Acanthamoeba castellanii str. Neff	14918063
ACA1_062550	CDS	ACA1_062550	NW_004457442.1	1223197	1228720	D	encoded by transcript ACA1_062550A; uncharacterized protein	join(1223197..1223251,1223312..1224540,1224618..1224693,1224762..1224853,1224911..1224957,1225018..1225870,1225952..1226027,1226104..1226238,1226324..1226448,1226541..1226607,1226678..1227117,1227182..1227267,1227362..1227785,1227848..1227934,1228021..1228202,1228263..1228360,1228444..1228501,1228570..1228720)	Acanthamoeba castellanii str. Neff	14918065
ACA1_062560	CDS	ACA1_062560	NW_004457442.1	1229200	1231956	D	encoded by transcript ACA1_062560A; arginine-tRNA ligase	join(1229200..1229241,1229547..1229732,1229801..1229970,1230033..1230172,1230236..1230333,1230434..1230509,1230600..1230720,1230801..1230885,1230957..1231206,1231278..1231696,1231798..1231956)	Acanthamoeba castellanii str. Neff	14918066
ACA1_062570	CDS	ACA1_062570	NW_004457442.1	1232875	1236913	R	encoded by transcript ACA1_062570A; zinc finger, c2h2 type domain containing protein	complement(join(1232875..1232946,1233018..1233135,1233226..1233374,1233458..1233532,1233632..1233801,1233902..1234209,1234457..1234490,1234529..1234721,1234774..1234919,1234989..1236015,1236089..1236193,1236301..1236425,1236511..1236913))	Acanthamoeba castellanii str. Neff	14918067
ACA1_062580	CDS	ACA1_062580	NW_004457442.1	1237238	1238569	R	encoded by transcript ACA1_062580A; phosducin, putative	complement(join(1237238..1237304,1237368..1237456,1237529..1237672,1237748..1237853,1237927..1238000,1238036..1238158,1238217..1238303,1238384..1238448,1238521..1238569))	Acanthamoeba castellanii str. Neff	14918068
ACA1_062590	CDS	ACA1_062590	NW_004457442.1	1238911	1250925	D	encoded by transcript ACA1_062590A; HEAT repeat domain containing protein	join(1238911..1239154,1239309..1239519,1239579..1239780,1239862..1239987,1240064..1240182,1240275..1240394,1240469..1240611,1240691..1240927,1240997..1241113,1241188..1241311,1241393..1241563,1241646..1242228,1242299..1242470,1242554..1242724,1242815..1242894,1242968..1243114,1243206..1243555,1243624..1243734,1243808..1243974,1244058..1244446,1244518..1244607,1244703..1244834,1244944..1245036,1245129..1245522,1245607..1245719,1245802..1246143,1246234..1246485,1246566..1246692,1246795..1246938,1247044..1247226,1247315..1247394,1247494..1247617,1247730..1247933,1247977..1248125,1248210..1248316,1248379..1248515,1248606..1248735,1248867..1249426,1249542..1249722,1249810..1250660,1250744..1250925)	Acanthamoeba castellanii str. Neff	14918407
ACA1_062600	CDS	ACA1_062600	NW_004457442.1	1251149	1251732	R	encoded by transcript ACA1_062600A; Ctype lysozyme/alpha-lactalbumin superfamily protein	complement(join(1251149..1251269,1251354..1251577,1251652..1251732))	Acanthamoeba castellanii str. Neff	14918408
ACA1_062610	CDS	ACA1_062610	NW_004457442.1	1252369	1253820	D	encoded by transcript ACA1_062610A; uncharacterized protein	join(1252369..1252426,1252527..1252633,1252691..1253200,1253266..1253820)	Acanthamoeba castellanii str. Neff	14918409
ACA1_062620	CDS	ACA1_062620	NW_004457442.1	1253870	1257322	R	encoded by transcript ACA1_062620A; uncharacterized protein	complement(join(1253870..1253888,1254110..1254308,1254395..1254533,1254625..1254723,1254808..1254906,1254982..1255130,1255212..1255896,1255951..1256640,1256722..1256850,1256861..1256904,1257015..1257143,1257211..1257322))	Acanthamoeba castellanii str. Neff	14918410
ACA1_062630	CDS	ACA1_062630	NW_004457442.1	1257391	1258166	R	encoded by transcript ACA1_062630A; uncharacterized protein	complement(join(1257391..1257477,1257697..1257819,1257938..1258021,1258095..1258166))	Acanthamoeba castellanii str. Neff	14918411
ACA1_062640	CDS	ACA1_062640	NW_004457442.1	1258604	1260302	R	encoded by transcript ACA1_062640A; fungal Zn(2)-Cys(6) binuclear cluster domain containing protein	complement(join(1258604..1258713,1258811..1258867,1259026..1259112,1259196..1259363,1259552..1260302))	Acanthamoeba castellanii str. Neff	14918412
ACA1_062650	CDS	ACA1_062650	NW_004457442.1	1260890	1267598	D	encoded by transcript ACA1_062650A; uncharacterized protein	join(1260890..1261055,1261139..1261209,1261293..1261422,1261527..1261742,1261838..1262118,1262186..1262367,1262522..1262654,1262716..1262895,1262975..1263094,1263188..1263319,1263415..1263665,1263738..1263835,1263925..1263977,1264066..1264261,1264342..1264481,1264586..1264669,1264807..1264872,1264965..1265086,1265321..1265480,1265632..1265739,1265799..1265891,1266021..1266436,1266501..1266766,1266832..1267069,1267161..1267308,1267368..1267598)	Acanthamoeba castellanii str. Neff	14918413
ACA1_062660	CDS	ACA1_062660	NW_004457442.1	1267826	1268451	D	encoded by transcript ACA1_062660A; uncharacterized protein	join(1267826..1267911,1267974..1268216,1268388..1268451)	Acanthamoeba castellanii str. Neff	14918414
ACA1_062670	CDS	ACA1_062670	NW_004457442.1	1268661	1270724	R	encoded by transcript ACA1_062670A; SPRY domain containing protein	complement(join(1268661..1268724,1268828..1268954,1269045..1269217,1269305..1269381,1269490..1269621,1269736..1269911,1270049..1270113,1270229..1270313,1270403..1270724))	Acanthamoeba castellanii str. Neff	14918415
ACA1_062680	CDS	ACA1_062680	NW_004457442.1	1271161	1272863	D	encoded by transcript ACA1_062680A; uncharacterized protein	join(1271161..1271604,1271746..1271935,1272032..1272111,1272201..1272290,1272417..1272561,1272679..1272863)	Acanthamoeba castellanii str. Neff	14918416
ACA1_062690	CDS	ACA1_062690	NW_004457442.1	1273051	1276834	R	encoded by transcript ACA1_062690A; DEAD/DEAH box helicase domain containing protein	complement(join(1273051..1273312,1273397..1273571,1273667..1273784,1273902..1274013,1274110..1274279,1274383..1274501,1274618..1275077,1275174..1275332,1275415..1275714,1275812..1276390,1276508..1276834))	Acanthamoeba castellanii str. Neff	14918417
ACA1_062700	CDS	ACA1_062700	NW_004457442.1	1276989	1277994	D	encoded by transcript ACA1_062700A; Ulp1 protease family, Cterminal catalytic domain containing protein	join(1276989..1277101,1277165..1277253,1277320..1277431,1277504..1277606,1277668..1277743,1277861..1277994)	Acanthamoeba castellanii str. Neff	14918418
ACA1_062710	CDS	ACA1_062710	NW_004457442.1	1278822	1278937	D	encoded by transcript ACA1_062710A; uncharacterized protein	1278822..>1278937	Acanthamoeba castellanii str. Neff	14918419
ACA1_062820	CDS	ACA1_062820	NW_004457442.1	1282714	1283877	D	encoded by transcript ACA1_062820A; uncharacterized protein	1282714..1283877	Acanthamoeba castellanii str. Neff	14918420
ACA1_062830	CDS	ACA1_062830	NW_004457442.1	1283955	1284715	R	encoded by transcript ACA1_062830A; alkB, alkylation repair protein, putative	complement(join(1283955..1284053,1284210..1284326,1284413..1284715))	Acanthamoeba castellanii str. Neff	14918421
ACA1_062840	CDS	ACA1_062840	NW_004457442.1	1284750	1285177	R	encoded by transcript ACA1_062840A; uncharacterized protein	complement(join(1284750..1284845,1284938..1285177))	Acanthamoeba castellanii str. Neff	14918422
ACA1_062850	CDS	ACA1_062850	NW_004457442.1	1285371	1287596	D	encoded by transcript ACA1_062850A; proteasomal atpaseassociated factor 1, putative	join(1285371..1285512,1285583..1285680,1285751..1285850,1285915..1286012,1286096..1286155,1286278..1286377,1286468..1286617,1286789..1286880,1286966..1287090,1287170..1287408,1287499..1287596)	Acanthamoeba castellanii str. Neff	14918423
ACA1_062860	CDS	ACA1_062860	NW_004457442.1	1287690	1295365	R	encoded by transcript ACA1_062860A; ankyrin repeat-containing protein	complement(join(1287690..1287778,1287872..1288061,1288146..1288319,1288417..1288539,1288649..1288730,1288860..1288957,1289058..1289200,1289302..1289383,1289522..1289653,1289784..1289923,1290047..1290182,1290293..1290362,1290457..1290540,1290678..1290739,1290870..1290987,1291070..1291145,1291316..1291450,1291575..1291649,1291786..1291849,1291940..1292031,1292193..1292276,1292370..1292515,1292655..1292897,1293151..1293405,1293492..1293591,1293659..1293826,1293903..1294064,1294148..1294297,1294388..1294599,1294671..1295365))	Acanthamoeba castellanii str. Neff	14918424
ACA1_062870	CDS	ACA1_062870	NW_004457442.1	1295883	1297259	R	encoded by transcript ACA1_062870A; premRNA splicing factor PRP38 family protein	complement(1295883..1297259)	Acanthamoeba castellanii str. Neff	14918425
ACA1_062880	CDS	ACA1_062880	NW_004457442.1	1297744	1300072	D	encoded by transcript ACA1_062880A; uncharacterized protein	join(1297744..1297823,1297890..1297979,1298072..1298156,1298235..1298291,1298353..1298429,1298520..1298634,1298757..1298833,1299092..1299258,1299351..1299475,1299555..1299652,1299736..1299820,1299902..1300072)	Acanthamoeba castellanii str. Neff	14918242
ACA1_062890	CDS	ACA1_062890	NW_004457442.1	1301275	1307377	D	encoded by transcript ACA1_062890A; Ras GTPase activator	join(1301275..1302240,1302320..1303358,1303450..1304671,1304768..1305266,1305352..1305464,1305537..1305595,1305710..1305896,1306028..1306108,1306174..1306279,1306381..1306495,1306627..1306820,1306889..1307377)	Acanthamoeba castellanii str. Neff	14918243
ACA1_062900	CDS	ACA1_062900	NW_004457442.1	1308504	1310998	D	encoded by transcript ACA1_062900A; peptidase family M3 protein	join(1308504..1308608,1308668..1308751,1308816..1308875,1308947..1309015,1309028..1309092,1309160..1309239,1309330..1309416,1309527..1309657,1309740..1309908,1309969..1310073,1310165..1310283,1310385..1310460,1310566..1310703,1310808..1310998)	Acanthamoeba castellanii str. Neff	14918244
ACA1_062910	CDS	ACA1_062910	NW_004457442.1	1311082	1312111	D	encoded by transcript ACA1_062910A; thimet oligopeptidase 1, putative	join(1311082..1311169,1311244..1311332,1311411..1311534,1311599..1311806,1311880..1312111)	Acanthamoeba castellanii str. Neff	14918245
ACA1_062920	CDS	ACA1_062920	NW_004457442.1	1312775	1314248	D	encoded by transcript ACA1_062920A; Rab1, putative	join(1312775..1312788,1312896..1312968,1313107..1313206,1313443..1313461,1313536..1313616,1313745..1313841,1313939..1314000,1314155..1314248)	Acanthamoeba castellanii str. Neff	14918246
ACA1_062930	CDS	ACA1_062930	NW_004457442.1	1314409	1315416	R	encoded by transcript ACA1_062930A; uncharacterized protein	complement(join(1314409..1314496,1314589..1314637,1314752..1314870,1314987..1315085,1315166..1315416))	Acanthamoeba castellanii str. Neff	14918247
ACA1_063040	CDS	ACA1_063040	NW_004457442.1	1316214	1316851	R	encoded by transcript ACA1_063040A; uncharacterized protein	complement(join(1316214..1316335,1316566..1316851))	Acanthamoeba castellanii str. Neff	14918248
ACA1_063050	CDS	ACA1_063050	NW_004457442.1	1317465	1319245	D	encoded by transcript ACA1_063050A; uncharacterized protein	join(1317465..1317580,1317850..1318057,1318182..1318320,1318392..1318512,1318602..1318752,1318812..1318924,1319005..1319245)	Acanthamoeba castellanii str. Neff	14918249
ACA1_063060	CDS	ACA1_063060	NW_004457442.1	1319522	1320262	D	encoded by transcript ACA1_063060A; Ras family GTP-binding protein YPT1	join(1319522..1319726,1319838..1320262)	Acanthamoeba castellanii str. Neff	14918250
ACA1_063070	CDS	ACA1_063070	NW_004457442.1	1320836	1322082	D	encoded by transcript ACA1_063070A; P21Rho-binding domain containing protein	join(1320836..1320973,1321062..1321175,1321286..1321415,1321479..1321723,1321790..1321900,1321975..1322082)	Acanthamoeba castellanii str. Neff	14918251
ACA1_063080	CDS	ACA1_063080	NW_004457442.1	1322141	1322713	R	encoded by transcript ACA1_063080A; uncharacterized protein	complement(join(1322141..1322622,1322689..1322713))	Acanthamoeba castellanii str. Neff	14918252
ACA1_063090	CDS	ACA1_063090	NW_004457442.1	1323614	1326826	R	encoded by transcript ACA1_063090A; uncharacterized protein	complement(join(1323614..1323840,1323938..1324495,1324551..1324853,1325106..1325201,1325266..1325349,1325741..1325818,1325913..1325978,1326047..1326124,1326187..1326288,1326379..1326444,1326509..1326615,1326699..1326826))	Acanthamoeba castellanii str. Neff	14918253
ACA1_063100	CDS	ACA1_063100	NW_004457442.1	1327280	1330691	R	encoded by transcript ACA1_063100A; uncharacterized protein	complement(join(1327280..1327503,1327600..1328157,1328242..1328349,1328427..1328564,1328630..1328812,1328899..1328985,1329206..1329298,1329381..1329458,1329547..1329612,1329860..1329967,1330038..1330103,1330179..1330288,1330377..1330479,1330631..1330691))	Acanthamoeba castellanii str. Neff	14918254
ACA1_063110	CDS	ACA1_063110	NW_004457442.1	1331046	1333610	D	encoded by transcript ACA1_063110A; oxidoreductase, aldo/keto reductase superfamily protein	join(1331046..1331050,1331194..1331307,1331441..1331567,1331683..1331788,1331891..1332018,1332092..1332263,1332442..1332640,1332711..1332837,1332920..1333066,1333143..1333280,1333428..1333610)	Acanthamoeba castellanii str. Neff	14918255
ACA1_063120	CDS	ACA1_063120	NW_004457442.1	1333869	1336529	R	encoded by transcript ACA1_063120A; hydroxymethylglutaryl CoA reductase	complement(join(1333869..1333968,1334047..1334104,1334191..1334323,1334413..1334503,1334597..1334778,1334897..1335045,1335186..1335303,1335410..1335605,1335677..1335784,1335852..1335971,1336118..1336239,1336371..1336529))	Acanthamoeba castellanii str. Neff	14918256
ACA1_063130	CDS	ACA1_063130	NW_004457442.1	1336762	1338668	R	encoded by transcript ACA1_063130A; MHCK/EF2 kinase domain containing protein	complement(join(1336762..1337535,1337641..1337744,1337815..1338091,1338149..1338294,1338380..1338512,1338621..1338668))	Acanthamoeba castellanii str. Neff	14918257
ACA1_063140	CDS	ACA1_063140	NW_004457442.1	1339158	1341308	R	encoded by transcript ACA1_063140A; transporter, major facilitator subfamily protein	complement(join(1339158..1339479,1339562..1339661,1339737..1339842,1339946..1340047,1340270..1340374,1340468..1340544,1340630..1340684,1340790..1340886,1340950..1341052,1341141..1341210,1341285..1341308))	Acanthamoeba castellanii str. Neff	14918258
ACA1_063150	CDS	ACA1_063150	NW_004457442.1	1341639	1344229	R	encoded by transcript ACA1_063150A; transporter, major facilitator family protein	complement(join(1341639..1341951,1342019..1342118,1342201..1342306,1342400..1342501,1342591..1342647,1342743..1342847,1342933..1343009,1343097..1343151,1343222..1343351,1343431..1343533,1343614..1343683,1343755..1343865,1344044..1344229))	Acanthamoeba castellanii str. Neff	14918259
ACA1_063160	CDS	ACA1_063160	NW_004457442.1	1345145	1346501	R	encoded by transcript ACA1_063160A; uncharacterized protein	complement(join(1345145..1346224,1346451..1346501))	Acanthamoeba castellanii str. Neff	14918260
ACA1_063170	CDS	ACA1_063170	NW_004457442.1	1347822	1348780	R	encoded by transcript ACA1_063170A; uncharacterized protein	complement(join(1347822..1347974,1348095..1348217,1348329..1348430,1348494..1348565,1348631..1348780))	Acanthamoeba castellanii str. Neff	14917896
ACA1_063180	CDS	ACA1_063180	NW_004457442.1	1348995	1349757	D	encoded by transcript ACA1_063180A; zinc finger, C3HC4 type (RING finger) domain containing protein	join(1348995..1349086,1349187..1349257,1349300..1349484,1349590..1349757)	Acanthamoeba castellanii str. Neff	14917897
ACA1_063190	CDS	ACA1_063190	NW_004457442.1	1349944	1351252	R	encoded by transcript ACA1_063190A; START domain containing protein	complement(join(1349944..1350080,1350157..1350226,1350339..1350417,1350493..1350554,1350652..1350745,1350899..1350998,1351177..1351252))	Acanthamoeba castellanii str. Neff	14917898
ACA1_063200	CDS	ACA1_063200	NW_004457442.1	1351715	1352755	D	encoded by transcript ACA1_063200A; uncharacterized protein	1351715..1352755	Acanthamoeba castellanii str. Neff	14917899
ACA1_063210	CDS	ACA1_063210	NW_004457442.1	1352869	1358588	R	encoded by transcript ACA1_063210A; TBC domain containing protein	complement(join(1352869..1353683,1353741..1354066,1354149..1354225,1354304..1354669,1355001..1355138,1355227..1355403,1355501..1355658,1355737..1355839,1355911..1356033,1356110..1356231,1356326..1356400,1356463..1356556,1356889..1356978,1357146..1357571,1357687..1357868,1357946..1358588))	Acanthamoeba castellanii str. Neff	14917900
ACA1_063220	CDS	ACA1_063220	NW_004457442.1	1358863	1361521	D	encoded by transcript ACA1_063220A; trypsin domain containing protein	join(1358863..1359092,1359169..1359267,1359364..1359461,1359557..1359710,1359903..1359937,1360023..1360115,1360190..1360287,1360376..1360536,1360618..1360891,1360979..1361034,1361101..1361197,1361342..1361521)	Acanthamoeba castellanii str. Neff	14917901
ACA1_063230	CDS	ACA1_063230	NW_004457442.1	1361608	1362587	R	encoded by transcript ACA1_063230A; flagellar associated protein	complement(join(1361608..1361746,1361841..1361945,1362040..1362150,1362243..1362338,1362436..1362587))	Acanthamoeba castellanii str. Neff	14917902
ACA1_063240	CDS	ACA1_063240	NW_004457442.1	1363075	1364752	R	encoded by transcript ACA1_063240A; cellulase (glycosyl hydrolase family 5) subfamily protein	complement(join(1363075..1363428,1363504..1363585,1363652..1363768,1363824..1363939,1363995..1364264,1364339..1364404,1364475..1364638,1364704..1364752))	Acanthamoeba castellanii str. Neff	14917903
ACA1_063250	CDS	ACA1_063250	NW_004457442.1	1365076	1365904	R	encoded by transcript ACA1_063250A; MYND finger domain containing protein	complement(join(1365076..1365496,1365636..1365904))	Acanthamoeba castellanii str. Neff	14917904
ACA1_063260	CDS	ACA1_063260	NW_004457442.1	1365834	1369639	D	encoded by transcript ACA1_063260A; short chain dehydrogenase/reductase family oxidoreductase	join(1365834..1365890,1366042..1366140,1366171..1366227,1366308..1366381,1366475..1366552,1366649..1366781,1366852..1366938,1367040..1367573,1367669..1367748,1367859..1367950,1368040..1368594,1368690..1368778,1368860..1368904,1368989..1369087,1369156..1369245,1369305..1369387,1369453..1369639)	Acanthamoeba castellanii str. Neff	14917906
ACA1_063270	CDS	ACA1_063270	NW_004457442.1	1369962	1371035	D	encoded by transcript ACA1_063270A; uncharacterized protein	join(1369962..1370034,1370155..1370220,1370285..1370781,1370871..1371035)	Acanthamoeba castellanii str. Neff	14917905
ACA1_063280	CDS	ACA1_063280	NW_004457442.1	1371237	1372123	R	encoded by transcript ACA1_063280A; uncharacterized protein	complement(join(1371237..1371695,1371747..1371853,1371942..1372008,1372097..1372123))	Acanthamoeba castellanii str. Neff	14917907
ACA1_063290	CDS	ACA1_063290	NW_004457442.1	1372317	1373703	R	encoded by transcript ACA1_063290A; uncharacterized protein	complement(join(1372317..1372534,1372629..1373703))	Acanthamoeba castellanii str. Neff	14917908
ACA1_063300	CDS	ACA1_063300	NW_004457442.1	1373923	1378666	R	encoded by transcript ACA1_063300A; transporter, small conductance mechanosensitive ion channel (MscS) family protein	complement(join(1373923..1374006,1374088..1374215,1374296..1374387,1374479..1374659,1374742..1374834,1374893..1374959,1375079..1375148,1375246..1375374,1375475..1375533,1375622..1375702,1375806..1375878,1376101..1376241,1376331..1376418,1376515..1376582,1376662..1376737,1376802..1376853,1376921..1377010,1377082..1377149,1377226..1377304,1377376..1377523,1377607..1377784,1377849..1377890,1377979..1378666))	Acanthamoeba castellanii str. Neff	14917909
ACA1_063310	CDS	ACA1_063310	NW_004457442.1	1379546	1380835	D	encoded by transcript ACA1_063310A; phospholipid/glycerol acyltransferase, putative	join(1379546..1379713,1379777..1379832,1379915..1380019,1380343..1380387,1380453..1380624,1380773..1380835)	Acanthamoeba castellanii str. Neff	14917910
ACA1_063320	CDS	ACA1_063320	NW_004457442.1	1381139	1382710	D	encoded by transcript ACA1_063320A; uncharacterized protein	join(1381139..1382398,1382477..1382710)	Acanthamoeba castellanii str. Neff	14917911
ACA1_063330	CDS	ACA1_063330	NW_004457442.1	1382898	1388276	R	encoded by transcript ACA1_063330A; RhoGEF domain containing protein	complement(join(1382898..1383002,1383077..1383197,1383449..1383509,1383806..1383888,1383969..1384038,1384115..1384225,1384307..1384440,1384519..1384601,1384676..1384768,1384803..1384865,1385121..1385265,1385330..1385379,1385445..1385550,1385644..1385735,1385833..1385917,1385998..1386032,1386111..1386196,1386291..1386455,1386541..1386691,1386769..1386827,1386932..1387062,1387146..1387272,1387347..1387443,1387530..1387626,1387711..1387820,1387907..1388058,1388156..1388276))	Acanthamoeba castellanii str. Neff	14917912
ACA1_063340	CDS	ACA1_063340	NW_004457442.1	1388893	1392427	D	encoded by transcript ACA1_063340A; dynein intermediate chain, cytosolic, putative	join(1388893..1389009,1389175..1389289,1389424..1389593,1389693..1389873,1389964..1390035,1390126..1390282,1390360..1390414,1390583..1390711,1390798..1390889,1390972..1391167,1391250..1391374,1391479..1391623,1391772..1391830,1391909..1391990,1392051..1392176,1392314..1392427)	Acanthamoeba castellanii str. Neff	14917913
ACA1_063350	CDS	ACA1_063350	NW_004457442.1	1392712	1392984	D	encoded by transcript ACA1_063350A; uncharacterized protein	1392712..1392984	Acanthamoeba castellanii str. Neff	14917914
ACA1_063360	CDS	ACA1_063360	NW_004457442.1	1393565	1394068	D	encoded by transcript ACA1_063360A; phospholipase A2, putative	1393565..1394068	Acanthamoeba castellanii str. Neff	14918283
ACA1_063370	CDS	ACA1_063370	NW_004457442.1	1394348	1394833	D	encoded by transcript ACA1_063370A; uncharacterized protein	1394348..1394833	Acanthamoeba castellanii str. Neff	14918284
ACA1_063380	CDS	ACA1_063380	NW_004457442.1	1395357	1398701	R	encoded by transcript ACA1_063380A; splicing factor 3b subunit 1, putative	complement(1395357..1398701)	Acanthamoeba castellanii str. Neff	14918285
ACA1_063390	CDS	ACA1_063390	NW_004457442.1	1399093	1399732	D	encoded by transcript ACA1_063390A; 60S ribosomal protein, putative	join(1399093..1399113,1399333..1399540,1399623..1399732)	Acanthamoeba castellanii str. Neff	14918286
ACA1_063400	CDS	ACA1_063400	NW_004457442.1	1400070	1400944	D	encoded by transcript ACA1_063400A; prepeptidase C-terminal domain containing protein	join(1400070..1400390,1400531..1400743,1400822..1400944)	Acanthamoeba castellanii str. Neff	14918287
ACA1_063410	CDS	ACA1_063410	NW_004457442.1	1401132	1402811	R	encoded by transcript ACA1_063410A; uncharacterized protein	complement(1401132..1402811)	Acanthamoeba castellanii str. Neff	14918288
ACA1_063420	CDS	ACA1_063420	NW_004457442.1	1403207	1405562	R	encoded by transcript ACA1_063420A; WD40 repeat protein, COMPASS complex protein	complement(join(1403207..1403262,1403342..1403456,1403555..1403617,1403694..1403776,1403856..1403931,1404031..1404134,1404232..1404335,1404425..1404531,1404630..1404737,1404828..1404939,1405028..1405168,1405263..1405458,1405544..1405562))	Acanthamoeba castellanii str. Neff	14918289
ACA1_063430	CDS	ACA1_063430	NW_004457442.1	1405714	1408361	D	encoded by transcript ACA1_063430A; RhoGEF domain containing protein	join(1405714..1405764,1406282..1406491,1406630..1406803,1406918..1407025,1407097..1407303,1407370..1407772,1407869..1408009,1408075..1408361)	Acanthamoeba castellanii str. Neff	14918290
ACA1_063440	CDS	ACA1_063440	NW_004457442.1	1409058	1411310	D	encoded by transcript ACA1_063440A; uncharacterized protein	join(1409058..1409600,1409657..1410250,1410314..1410763,1410780..1411310)	Acanthamoeba castellanii str. Neff	14918291
ACA1_063450	CDS	ACA1_063450	NW_004457442.1	1411530	1412984	R	encoded by transcript ACA1_063450A; uncharacterized protein	complement(join(1411530..1412132,1412238..1412438,1412521..1412632,1412712..1412911,1412976..1412984))	Acanthamoeba castellanii str. Neff	14918292
ACA1_063460	CDS	ACA1_063460	NW_004457442.1	1413669	1415782	R	encoded by transcript ACA1_063460A; ATPase, AAA domain containing protein	complement(join(1413669..1413890,1413969..1414064,1414134..1414231,1414297..1414375,1414434..1414542,1414606..1414742,1414849..1414956,1415041..1415404,1415463..1415782))	Acanthamoeba castellanii str. Neff	14918293
ACA1_063470	CDS	ACA1_063470	NW_004457442.1	1415924	1426838	R	encoded by transcript ACA1_063470A; protein kinase domain containing protein	complement(join(1415924..1416019,1416108..1416325,1416410..1416515,1416746..1416877,1416967..1417067,1417132..1417245,1417323..1417449,1417526..1418041,1418142..1418428,1418522..1418609,1418692..1418834,1418918..1418984,1419109..1419182,1419276..1419746,1419821..1419956,1420014..1420161,1420228..1420372,1420486..1420617,1420732..1420871,1420941..1421023,1421116..1421328,1421395..1421792,1421858..1421965,1422106..1422170,1422234..1422359,1422437..1422800,1422891..1422925,1422996..1423266,1423328..1423765,1423950..1424093,1424142..1424273,1424347..1424427,1424502..1424574,1424701..1424936,1425103..1425426,1425486..1425682,1425775..1425947,1426012..1426154,1426229..1426609,1426694..1426838))	Acanthamoeba castellanii str. Neff	14918294
ACA1_063480	CDS	ACA1_063480	NW_004457442.1	1427118	1429327	D	encoded by transcript ACA1_063480A; AT hook motif domain containing protein	join(1427118..1427196,1427330..1427343,1427354..1427449,1427804..1428369,1428433..1428544,1428630..1428833,1428947..1429327)	Acanthamoeba castellanii str. Neff	14918295
ACA1_063490	CDS	ACA1_063490	NW_004457442.1	1429405	1431767	R	encoded by transcript ACA1_063490A; tetratricopeptide repeat domain containing protein	complement(join(1429405..1429650,1429748..1429894,1429975..1430088,1430158..1430336,1430539..1430821,1430893..1431266,1431528..1431556,1431640..1431767))	Acanthamoeba castellanii str. Neff	14918296
ACA1_063500	CDS	ACA1_063500	NW_004457442.1	1432069	1435544	D	encoded by transcript ACA1_063500A; Ubox domain containing protein	join(1432069..1432222,1432321..1432406,1432485..1432628,1432740..1432881,1432974..1433105,1433209..1433323,1433416..1433650,1433743..1433930,1434036..1434109,1434179..1434270,1434359..1434437,1434533..1434592,1434678..1434781,1434862..1435268,1435409..1435544)	Acanthamoeba castellanii str. Neff	14918297
ACA1_063510	CDS	ACA1_063510	NW_004457442.1	1435706	1441425	R	encoded by transcript ACA1_063510A; 5methyltetrahydrofolate-homocysteine methyltransferase	complement(join(1435706..1435786,1435867..1436070,1436176..1436283,1436352..1436955,1437046..1437250,1437318..1437731,1437856..1437973,1438046..1438319,1438447..1438576,1438660..1438804,1438926..1439104,1439183..1439312,1439395..1439650,1439855..1439903,1439993..1440110,1440214..1440383,1440491..1440746,1440931..1441022,1441123..1441230,1441404..1441425))	Acanthamoeba castellanii str. Neff	14918298
ACA1_063520	CDS	ACA1_063520	NW_004457442.1	1441724	1443270	R	encoded by transcript ACA1_063520A; zinc finger, c2h2 type domain containing protein	complement(join(1441724..1442603,1442679..1443203,1443257..1443270))	Acanthamoeba castellanii str. Neff	14918299
ACA1_063530	CDS	ACA1_063530	NW_004457442.1	1444146	1446174	D	encoded by transcript ACA1_063530A; uncharacterized protein	join(1444146..1444288,1444418..1444617,1444717..1445010,1445086..1445156,1445234..1445455,1445549..1445678,1445760..1445944,1446019..1446174)	Acanthamoeba castellanii str. Neff	14918300
ACA1_063540	CDS	ACA1_063540	NW_004457442.1	1446418	1447679	D	encoded by transcript ACA1_063540A; uncharacterized protein	join(1446418..1446534,1446605..1446742,1446809..1446998,1447083..1447429,1447542..1447679)	Acanthamoeba castellanii str. Neff	14918301
ACA1_063550	CDS	ACA1_063550	NW_004457442.1	1447925	1448823	R	encoded by transcript ACA1_063550A; cytidine and deoxycytidylate deaminase zincbinding region domain containing protein	complement(join(1447925..1447951,1448195..1448414,1448544..1448570,1448669..1448823))	Acanthamoeba castellanii str. Neff	14918302
ACA1_063560	CDS	ACA1_063560	NW_004457442.1	1448992	1450383	D	encoded by transcript ACA1_063560A; uncharacterized protein	join(1448992..1449108,1449243..1449380,1449473..1449613,1449717..1449774,1449837..1450132,1450213..1450383)	Acanthamoeba castellanii str. Neff	14917796
ACA1_063570	CDS	ACA1_063570	NW_004457442.1	1450876	1452586	D	encoded by transcript ACA1_063570A; uncharacterized protein	join(1450876..1451075,1451155..1451464,1451504..1452586)	Acanthamoeba castellanii str. Neff	14917797
ACA1_063580	CDS	ACA1_063580	NW_004457442.1	1452780	1453952	D	encoded by transcript ACA1_063580A; uncharacterized protein	join(1452780..1452878,1452962..1453099,1453169..1453309,1453373..1453430,1453535..1453682,1453871..1453952)	Acanthamoeba castellanii str. Neff	14917798
ACA1_063590	CDS	ACA1_063590	NW_004457442.1	1454387	1457726	D	encoded by transcript ACA1_063590A; RasGEF domain containing protein	join(1454387..1455779,1455869..1456007,1456082..1456184,1456281..1456531,1456618..1456711,1456794..1456874,1456965..1457134,1457206..1457286,1457356..1457455,1457571..1457726)	Acanthamoeba castellanii str. Neff	14917799
ACA1_063600	CDS	ACA1_063600	NW_004457442.1	1457849	1459151	R	encoded by transcript ACA1_063600A; zinc knuckle domain containing protein	complement(join(1457849..1457937,1458009..1458125,1458215..1458284,1458381..1459151))	Acanthamoeba castellanii str. Neff	14917800
ACA1_063610	CDS	ACA1_063610	NW_004457442.1	1459351	1460038	R	encoded by transcript ACA1_063610A; vacuolar protein sorting 55 protein	complement(join(1459351..1459509,1459571..1459658,1459742..1459832,1459966..1460038))	Acanthamoeba castellanii str. Neff	14917801
ACA1_063620	CDS	ACA1_063620	NW_004457442.1	1460483	1463449	R	encoded by transcript ACA1_063620A; hydroxysteroid dehydrogenase, putative	complement(join(1460483..1461012,1461076..1461387,1461482..1461893,1461988..1462059,1462313..1462375,1462520..1462782,1462873..1463003,1463064..1463218,1463306..1463449))	Acanthamoeba castellanii str. Neff	14917802
ACA1_063630	CDS	ACA1_063630	NW_004457442.1	1463736	1464146	R	encoded by transcript ACA1_063630A; singlestranded DNA binding protein, putative	complement(join(1463736..1463812,1463873..1464146))	Acanthamoeba castellanii str. Neff	14917803
ACA1_063640	CDS	ACA1_063640	NW_004457442.1	1464559	1466019	D	encoded by transcript ACA1_063640A; core histone h2a/h2b/h3/h4 superfamily protein	join(1464559..1464686,1464777..1464885,1464978..1465091,1465192..1465259,1465341..1465377,1465457..1465717,1465819..1466019)	Acanthamoeba castellanii str. Neff	14917804
ACA1_063650	CDS	ACA1_063650	NW_004457442.1	1466088	1466534	R	encoded by transcript ACA1_063650A; uncharacterized protein	complement(join(1466088..1466340,1466425..1466534))	Acanthamoeba castellanii str. Neff	14917805
ACA1_063660	CDS	ACA1_063660	NW_004457442.1	1466976	1468283	D	encoded by transcript ACA1_063660A; Fbox domain containing protein	join(1466976..1467933,1468120..1468283)	Acanthamoeba castellanii str. Neff	14917806
ACA1_063670	CDS	ACA1_063670	NW_004457442.1	1468363	1470170	D	encoded by transcript ACA1_063670A; solute carrier family protein	join(1468363..1468506,1468660..1468792,1468890..1468935,1469039..1469133,1469194..1469276,1469447..1469629,1469711..1469855,1469937..1470034,1470117..1470170)	Acanthamoeba castellanii str. Neff	14917807
ACA1_063680	CDS	ACA1_063680	NW_004457442.1	1470615	1474548	D	encoded by transcript ACA1_063680A; Reverse transcriptase	join(1470615..1474529,1474540..1474548)	Acanthamoeba castellanii str. Neff	14917808
ACA1_063690	CDS	ACA1_063690	NW_004457442.1	1475096	1476976	R	encoded by transcript ACA1_063690A; amidase domain containing protein	complement(join(1475096..1475674,1475730..1476053,1476158..1476976))	Acanthamoeba castellanii str. Neff	14917809
ACA1_063700	CDS	ACA1_063700	NW_004457442.1	1477275	1478189	R	encoded by transcript ACA1_063700A; Vacuolarsorting protein SNF7, putative	complement(join(1477275..1477396,1477505..1477716,1477784..1477961,1478027..1478189))	Acanthamoeba castellanii str. Neff	14917810
ACA1_063710	CDS	ACA1_063710	NW_004457442.1	1478564	1479022	D	encoded by transcript ACA1_063710A; cytochrome b-like heme/steroid binding domain containing protein	1478564..1479022	Acanthamoeba castellanii str. Neff	14917811
ACA1_063720	CDS	ACA1_063720	NW_004457442.1	1479995	1487561	R	encoded by transcript ACA1_063720A; protein synthetase, putative	complement(join(1479995..1480348,1480417..1480723,1480798..1480994,1481084..1481397,1481478..1481665,1481732..1482630,1482726..1482947,1483076..1483262,1483342..1483678,1483768..1483893,1483976..1484192,1484266..1484354,1484434..1485163,1485249..1485922,1485997..1486183,1486307..1486447,1486523..1486666,1486797..1487082,1487223..1487281,1487421..1487561))	Acanthamoeba castellanii str. Neff	14917812
ACA1_063730	CDS	ACA1_063730	NW_004457442.1	1487730	1491959	R	encoded by transcript ACA1_063730A; tetratricopeptide repeat domain containing protein	complement(join(1487730..1487933,1488015..1488058,1488135..1488288,1488366..1488428,1488505..1488626,1488695..1488837,1488913..1488968,1489050..1489173,1489242..1489368,1489431..1489479,1489572..1489662,1489741..1489880,1489966..1490056,1490129..1490231,1490315..1490528,1490598..1490786,1490874..1491155,1491237..1491361,1491430..1491612,1491675..1491776,1491869..1491959))	Acanthamoeba castellanii str. Neff	14917813
ACA1_063740	CDS	ACA1_063740	NW_004457442.1	1492174	1494231	R	encoded by transcript ACA1_063740A; uncharacterized protein	complement(join(1492174..1492463,1492534..1492697,1492780..1492988,1493076..1493148,1493226..1493458,1493554..1493619,1493686..1493710,1493800..1493873,1494034..1494231))	Acanthamoeba castellanii str. Neff	14917814
ACA1_063750	CDS	ACA1_063750	NW_004457442.1	1495157	1496607	D	encoded by transcript ACA1_063750A; mitochondrion protein	join(1495157..1495335,1495373..1495603,1495667..1495816,1495888..1496034,1496107..1496312,1496395..1496469,1496537..1496607)	Acanthamoeba castellanii str. Neff	14917815
ACA1_063760	CDS	ACA1_063760	NW_004457442.1	1496673	1497587	D	encoded by transcript ACA1_063760A; PH domain containing protein	join(1496673..1496768,1496977..1497103,1497187..1497266,1497381..1497587)	Acanthamoeba castellanii str. Neff	14917816
ACA1_063770	CDS	ACA1_063770	NW_004457442.1	1497713	1498548	D	encoded by transcript ACA1_063770A; uncharacterized protein	join(1497713..1497962,1498121..1498548)	Acanthamoeba castellanii str. Neff	14917817
ACA1_063780	CDS	ACA1_063780	NW_004457442.1	1499366	1503738	D	encoded by transcript ACA1_063780A; nucleotidyltransferase domain containing protein	join(1499366..1499462,1499823..1499992,1500071..1500472,1500569..1500678,1500778..1501041,1501132..1501252,1501974..1502114,1502216..1502310,1502403..1503738)	Acanthamoeba castellanii str. Neff	14917937
ACA1_063790	CDS	ACA1_063790	NW_004457442.1	1504199	1505519	R	encoded by transcript ACA1_063790A; uncharacterized protein	complement(join(1504199..1504328,1504393..1504530,1504637..1504745,1504847..1505519))	Acanthamoeba castellanii str. Neff	14917938
ACA1_063800	CDS	ACA1_063800	NW_004457442.1	1505883	1509025	R	encoded by transcript ACA1_063800A; SPRY domain containing protein	complement(join(1505883..1505946,1506037..1506142,1506203..1506266,1506368..1506441,1506525..1506577,1506665..1506741,1506871..1506948,1507075..1507134,1507220..1507318,1507420..1507911,1507986..1508227,1508344..1508475,1508650..1509025))	Acanthamoeba castellanii str. Neff	14917939
ACA1_063810	CDS	ACA1_063810	NW_004457442.1	1509229	1510757	D	encoded by transcript ACA1_063810A; DHHC zinc finger domain containing protein	join(1509229..1509489,1509576..1509733,1509995..1510076,1510163..1510224,1510315..1510423,1510533..1510757)	Acanthamoeba castellanii str. Neff	14917940
ACA1_063820	CDS	ACA1_063820	NW_004457442.1	1511349	1514123	D	encoded by transcript ACA1_063820A; uncharacterized protein	join(1511349..1511721,1511852..1511949,1512030..1512107,1512180..1512263,1512387..1512590,1512670..1512786,1512883..1513006,1513084..1513178,1513272..1513374,1513491..1513607,1513702..1513884,1513930..1514123)	Acanthamoeba castellanii str. Neff	14917941
ACA1_063830	CDS	ACA1_063830	NW_004457442.1	1514303	1515588	D	encoded by transcript ACA1_063830A; uncharacterized protein	join(1514303..1514474,1514603..1514650,1514756..1514803,1514924..1515023,1515090..1515478,1515548..1515588)	Acanthamoeba castellanii str. Neff	14917942
ACA1_063840	CDS	ACA1_063840	NW_004457442.1	1515864	1516851	R	encoded by transcript ACA1_063840A; uncharacterized protein	complement(join(1515864..1516535,1516558..>1516851))	Acanthamoeba castellanii str. Neff	14917943
ACA1_063850	CDS	ACA1_063850	NW_004457442.1	1518365	1519033	D	encoded by transcript ACA1_063850A; uncharacterized protein	join(1518365..1518421,1518492..1518615,1518699..1518839,1518906..1519033)	Acanthamoeba castellanii str. Neff	14917944
ACA1_063860	CDS	ACA1_063860	NW_004457442.1	1519116	1519875	R	encoded by transcript ACA1_063860A; uncharacterized protein	complement(join(1519116..1519308,1519512..1519646,1519739..1519875))	Acanthamoeba castellanii str. Neff	14917945
ACA1_063870	CDS	ACA1_063870	NW_004457442.1	1521238	1522661	D	encoded by transcript ACA1_063870A; Ser/Thr phosphatase, putative	join(1521238..1521312,1521454..1522068,1522159..1522320,1522440..1522661)	Acanthamoeba castellanii str. Neff	14917946
ACA1_063880	CDS	ACA1_063880	NW_004457442.1	1523251	1525193	R	encoded by transcript ACA1_063880A; regulator of chromosome condensation (RCC1) repeat domain containing protein	complement(join(1523251..1523366,1523443..1523598,1523660..1523765,1523913..1524052,1524126..1524234,1524315..1524435,1524615..1524703,1524783..1524913,1524992..1525193))	Acanthamoeba castellanii str. Neff	14917947
ACA1_063890	CDS	ACA1_063890	NW_004457442.1	1526076	1527877	D	encoded by transcript ACA1_063890A; sarcosine oxidase	join(1526076..1526169,1526289..1526488,1526661..1526744,1526815..1526970,1527059..1527245,1527338..1527483,1527539..1527877)	Acanthamoeba castellanii str. Neff	14917948
ACA1_063900	CDS	ACA1_063900	NW_004457442.1	1528162	1534055	D	encoded by transcript ACA1_063900A; rad50 subfamily protein	join(1528162..1528284,1528375..1528461,1528529..1528696,1528787..1528962,1529040..1529154,1529251..1529479,1529554..1529777,1529818..1529988,1530059..1530163,1530236..1530337,1530412..1530623,1530696..1530785,1530864..1530991,1531056..1531149,1531215..1531344,1531452..1531661,1531732..1531845,1531925..1532019,1532105..1532306,1532395..1532564,1532644..1532823,1532901..1533042,1533124..1533302,1533373..1533532,1533620..1533816,1533896..1534055)	Acanthamoeba castellanii str. Neff	14917949
ACA1_063910	CDS	ACA1_063910	NW_004457442.1	1534572	1535830	D	encoded by transcript ACA1_063910A; Tho complex subunit 7 protein	join(1534572..1534599,1534663..1534801,1534885..1535012,1535092..1535236,1535330..1535400,1535496..1535830)	Acanthamoeba castellanii str. Neff	14917950
ACA1_063920	CDS	ACA1_063920	NW_004457442.1	1536068	1537260	R	encoded by transcript ACA1_063920A; uncharacterized protein	complement(join(1536068..1536283,1536367..1536485,1536595..1536936,1537011..1537260))	Acanthamoeba castellanii str. Neff	14917951
ACA1_063930	CDS	ACA1_063930	NW_004457442.1	1537357	1539026	R	encoded by transcript ACA1_063930A; THUMP domain containing protein	complement(join(1537357..1537653,1537743..1537883,1537990..1538163,1538202..1538248,1538321..1538536,1538553..1538616,1538721..1538918,1538958..1539026))	Acanthamoeba castellanii str. Neff	14917952
ACA1_063940	CDS	ACA1_063940	NW_004457442.1	1539190	1540117	D	encoded by transcript ACA1_063940A; RNA recognition domain containing protein	join(1539190..1539855,1539989..1540117)	Acanthamoeba castellanii str. Neff	14917953
ACA1_063950	CDS	ACA1_063950	NW_004457442.1	1540705	1543841	D	encoded by transcript ACA1_063950A; Fbox domain containing protein	join(1540705..1540789,1541012..1541316,1541410..1541499,1541559..1541715,1541872..1542021,1542099..1542302,1542377..1542474,1542548..1542618,1542715..1542815,1542907..1543017,1543097..1543209,1543299..1543449,1543521..1543637,1543750..1543841)	Acanthamoeba castellanii str. Neff	14917954
ACA1_063960	CDS	ACA1_063960	NW_004457442.1	1543990	1544819	D	encoded by transcript ACA1_063960A; uncharacterized protein	join(1543990..1544482,1544563..1544819)	Acanthamoeba castellanii str. Neff	14917955
ACA1_063970	CDS	ACA1_063970	NW_004457442.1	1545014	1548900	R	encoded by transcript ACA1_063970A; SH3 domain containing protein	complement(join(1545014..1545324,1545431..1545592,1545627..1545776,1546006..1546083,1546172..1546255,1546352..1546447,1546547..1546696,1547106..1547310,1547405..1547514,1548358..1548446,1548535..1548647,1548753..1548849,1548887..>1548900))	Acanthamoeba castellanii str. Neff	14917956
ACA1_064180	CDS	ACA1_064180	NW_004457442.1	1550165	1550886	D	encoded by transcript ACA1_064180A; RNA polymerase II transcriptional coactivator, putative	join(1550165..1550221,1550304..1550438,1550501..1550532,1550660..1550755,1550832..1550886)	Acanthamoeba castellanii str. Neff	14917957
ACA1_064190	CDS	ACA1_064190	NW_004457442.1	1551390	1553708	D	encoded by transcript ACA1_064190A; uncharacterized protein	join(1551390..1551603,1551876..1551938,1552025..1552152,1552246..1552317,1552411..1552554,1552641..1552826,1552907..1553016,1553087..1553501,1553595..1553708)	Acanthamoeba castellanii str. Neff	14918303
ACA1_064200	CDS	ACA1_064200	NW_004457442.1	1554229	1557738	D	encoded by transcript ACA1_064200A; PH domain containing protein	join(1554229..1554253,1554537..1554601,1554705..1554774,1554863..1554913,1555014..1555075,1555163..1555201,1555293..1555347,1555463..1555540,1555668..1555738,1555845..1555862,1555940..1555975,1556059..1556135,1556209..1556262,1556372..1556406,1556507..1556600,1556703..1556774,1556868..1556922,1557000..1557050,1557133..1557234,1557325..1557395,1557473..1557573,1557656..1557738)	Acanthamoeba castellanii str. Neff	14918304
ACA1_064210	CDS	ACA1_064210	NW_004457442.1	1557908	1561197	D	encoded by transcript ACA1_064210A; phospholipase D active site domain containing protein	join(1557908..1558036,1558164..1558216,1558292..1558392,1558488..1558599,1558647..1558748,1558843..1558926,1558998..1559257,1559345..1559436,1559587..1559640,1559747..1559811,1559924..1559999,1560082..1560237,1560327..1560434,1560518..1560661,1560744..1560974,1561057..1561197)	Acanthamoeba castellanii str. Neff	14918305
ACA1_064220	CDS	ACA1_064220	NW_004457442.1	1561330	1562659	D	encoded by transcript ACA1_064220A; uncharacterized protein	join(1561330..1561551,1561632..1561814,1561875..1562389,1562509..1562659)	Acanthamoeba castellanii str. Neff	14918306
ACA1_064230	CDS	ACA1_064230	NW_004457442.1	1563000	1565202	R	encoded by transcript ACA1_064230A; betaine aldehyde dehydrogenase	complement(join(1563000..1563047,1563259..1563369,1563572..1563697,1563841..1563948,1564022..1564101,1564205..1564333,1564414..1564663,1564722..1564880,1564979..1565075,1565147..1565202))	Acanthamoeba castellanii str. Neff	14918307
ACA1_064240	CDS	ACA1_064240	NW_004457442.1	1565303	1567235	D	encoded by transcript ACA1_064240A; NADH dehydrogenase, putative	join(1565303..1565362,1565432..1565564,1565665..1565797,1565893..1566001,1566070..1566159,1566224..1566300,1566369..1566459,1566551..1566634,1566720..1566850,1566931..1567024,1567107..1567235)	Acanthamoeba castellanii str. Neff	14918308
ACA1_064250	CDS	ACA1_064250	NW_004457442.1	1567389	1572278	D	encoded by transcript ACA1_064250A; adaptin subfamily protein	join(1567389..1567449,1567511..1567722,1567799..1567883,1568013..1568124,1568196..1568318,1568401..1568689,1568777..1569006,1569083..1569157,1569277..1569399,1569508..1569738,1569819..1569897,1569959..1570056,1570134..1570362,1570452..1570570,1570642..1570974,1571059..1571167,1571252..1571431,1571522..1571720,1571791..1571945,1572031..1572108,1572231..1572278)	Acanthamoeba castellanii str. Neff	14918309
ACA1_064260	CDS	ACA1_064260	NW_004457442.1	1572405	1573286	R	encoded by transcript ACA1_064260A; uncharacterized protein	complement(join(1572405..1572520,1572605..1572711,1572797..1572969,1573042..1573148,1573232..1573286))	Acanthamoeba castellanii str. Neff	14918310
ACA1_064270	CDS	ACA1_064270	NW_004457442.1	1573986	1574901	R	encoded by transcript ACA1_064270A; dihydroxybiphenyl dioxygenase, putative	complement(join(1573986..1574123,1574232..1574314,1574434..1574526,1574595..1574669,1574769..1574901))	Acanthamoeba castellanii str. Neff	14918311
ACA1_064280	CDS	ACA1_064280	NW_004457442.1	1575187	1575749	D	encoded by transcript ACA1_064280A; uncharacterized protein	join(1575187..1575314,1575401..1575749)	Acanthamoeba castellanii str. Neff	14918312
ACA1_064290	CDS	ACA1_064290	NW_004457442.1	1575912	1580100	R	encoded by transcript ACA1_064290A; uncharacterized protein	complement(join(1575912..1576110,1576189..1576373,1576457..1576678,1576736..1576868,1576942..1577046,1577166..1577264,1577318..1577562,1577652..1577765,1577838..1577953,1578002..1578140,1578195..1578375,1578455..1578510,1578604..1578643,1578784..1579082,1579161..1579335,1579430..1579555,1579666..1579811,1579880..1579969,1580029..1580100))	Acanthamoeba castellanii str. Neff	14918313
ACA1_064310	CDS	ACA1_064310	NW_004457442.1	1582565	1584596	R	encoded by transcript ACA1_064310A; arrestin (or santigen), c-terminal domain containing protein	complement(join(1582565..1582642,1582722..1582839,1582933..1582967,1583029..1583195,1583290..1583470,1583553..1583635,1583730..1583872,1583994..1584081,1584188..1584317,1584534..1584596))	Acanthamoeba castellanii str. Neff	14918315
ACA1_064320	CDS	ACA1_064320	NW_004457442.1	1584759	1587251	D	encoded by transcript ACA1_064320A; uncharacterized protein	join(1584759..1584882,1585076..1585151,1585314..1585391,1585493..1585599,1585782..1585932,1586038..1586155,1586318..1586616,1586702..1586805,1586898..1587009,1587110..1587251)	Acanthamoeba castellanii str. Neff	14918316
ACA1_064330	CDS	ACA1_064330	NW_004457442.1	1587285	1592686	R	encoded by transcript ACA1_064330A; glycolate dehydrogenase	complement(join(1587285..1587565,1587679..1588041,1588170..1588358,1588443..1588565,1588640..1588927,1588992..1589120,1589194..1589298,1589366..1589425,1589543..1589782,1589867..1589974,1590096..1590245,1590356..1590467,1590555..1590647,1590746..1590813,1590917..1590950,1591056..1591149,1591224..1591405,1591546..1591643,1591716..1591926,1592002..1592097,1592202..1592275,1592358..1592458,1592553..1592686))	Acanthamoeba castellanii str. Neff	14918317
ACA1_064340	CDS	ACA1_064340	NW_004457442.1	1592925	1597093	R	encoded by transcript ACA1_064340A; GRAM domain containing protein	complement(join(1592925..1594023,1594086..1594245,1594316..1594485,1594569..1594623,1594694..1594821,1594906..1595089,1595152..1595512,1595599..1595684,1595769..1595826,1595931..1595998,1596079..1596360,1596429..1596492,1596573..1596668,1596750..1596853,1596967..1597093))	Acanthamoeba castellanii str. Neff	14918318
ACA1_064350	CDS	ACA1_064350	NW_004457442.1	1597751	1602270	R	encoded by transcript ACA1_064350A; C2 domain containing protein	complement(join(1597751..1598536,1598592..1599221,1599298..1599382,1599462..1599534,1599635..1599789,1599838..1599976,1600057..1600230,1600311..1600425,1600506..1600919,1600946..1601110,1601170..1601364,1601461..1601574,1601685..1601764,1601835..1601903,1602072..1602270))	Acanthamoeba castellanii str. Neff	14918319
ACA1_064360	CDS	ACA1_064360	NW_004457442.1	1602821	1605696	D	encoded by transcript ACA1_064360A; DNA repair protein (mre11), putative	join(1602821..1602972,1603062..1603149,1603239..1603462,1603564..1603736,1603831..1604114,1604174..1604317,1604409..1604575,1604668..1604795,1604873..1605198,1605266..1605408,1605494..1605551,1605610..1605696)	Acanthamoeba castellanii str. Neff	14918491
ACA1_064370	CDS	ACA1_064370	NW_004457442.1	1606370	1607218	D	encoded by transcript ACA1_064370A; AT Hook plus PHD finger transcription factor family member (athp1), putative	join(<1606370..1606522,1606581..1606804,1606868..1607057,1607124..>1607218)	Acanthamoeba castellanii str. Neff	14918492
ACA1_064380	CDS	ACA1_064380	NW_004457442.1	1607289	1608260	D	encoded by transcript ACA1_064380A; uncharacterized protein	1607289..1608260	Acanthamoeba castellanii str. Neff	14918493
ACA1_064400	CDS	ACA1_064400	NW_004457442.1	1612519	1613938	R	encoded by transcript ACA1_064400A; geranylgeranyl transferase type2 subunit beta, putative	complement(join(1612519..1613130,1613211..1613381,1613498..1613938))	Acanthamoeba castellanii str. Neff	14918495
ACA1_064410	CDS	ACA1_064410	NW_004457442.1	1614336	1615761	R	encoded by transcript ACA1_064410A; Ras subfamily protein, putative	complement(join(1614336..1614887,1614992..1615122,1615242..1615344,1615527..1615579,1615692..1615761))	Acanthamoeba castellanii str. Neff	14918496
ACA1_064420	CDS	ACA1_064420	NW_004457442.1	1616079	1617421	D	encoded by transcript ACA1_064420A; Rasrelated protein Rac1, putative	join(1616079..1616127,1616259..1616307,1616399..1616484,1616648..1616769,1616933..1617056,1617141..1617256,1617365..1617421)	Acanthamoeba castellanii str. Neff	14918497
ACA1_064430	CDS	ACA1_064430	NW_004457442.1	1617721	1618508	D	encoded by transcript ACA1_064430A; uncharacterized protein	join(1617721..1618145,1618233..1618356,1618461..1618508)	Acanthamoeba castellanii str. Neff	14918498
ACA1_064440	CDS	ACA1_064440	NW_004457442.1	1618809	1623131	R	encoded by transcript ACA1_064440A; RhoGEF domain containing protein	complement(join(1618809..1619591,1619652..1619794,1619916..1620038,1620293..1620440,1620541..1621047,1621128..1621305,1621411..1621534,1621628..1621711,1621814..1621973,1622056..1622156,1622286..1622420,1622613..1622816,1622885..1623131))	Acanthamoeba castellanii str. Neff	14918499
ACA1_064450	CDS	ACA1_064450	NW_004457442.1	1623488	1623819	D	encoded by transcript ACA1_064450A; Cyclindependent kinase, putative	join(1623488..1623543,1623612..1623819)	Acanthamoeba castellanii str. Neff	14918500
ACA1_064460	CDS	ACA1_064460	NW_004457442.1	1624109	1625482	R	encoded by transcript ACA1_064460A; ankyrin repeat domain protein	complement(1624109..1625482)	Acanthamoeba castellanii str. Neff	14918501
ACA1_064480	CDS	ACA1_064480	NW_004457442.1	1626680	1627123	D	encoded by transcript ACA1_064480A; uncharacterized protein	join(1626680..1626722,1626810..1626946,1627016..1627123)	Acanthamoeba castellanii str. Neff	14918503
ACA1_064490	CDS	ACA1_064490	NW_004457442.1	1627522	1628525	D	encoded by transcript ACA1_064490A; MAP kinase phosphatase 6, putative	join(1627522..1627528,1627593..1627688,1627765..1627904,1628017..1628105,1628175..1628218,1628297..1628383,1628452..1628525)	Acanthamoeba castellanii str. Neff	14918504
ACA1_064500	CDS	ACA1_064500	NW_004457442.1	1628748	1629246	R	encoded by transcript ACA1_064500A; elongation factor SIII p15 subunit, putative	complement(join(1628748..1628756,1628848..1629029,1629126..1629246))	Acanthamoeba castellanii str. Neff	14918505
ACA1_064510	CDS	ACA1_064510	NW_004457442.1	1629495	1630889	R	encoded by transcript ACA1_064510A; small GTPbinding protein domain containing protein	complement(join(1629495..1629686,1629787..1629940,1630011..1630081,1630168..1630314,1630461..1630538,1630611..1630654,1630754..1630889))	Acanthamoeba castellanii str. Neff	14918506
ACA1_064520	CDS	ACA1_064520	NW_004457442.1	1631071	1635050	R	encoded by transcript ACA1_064520A; leucine rich repeat domain containing protein	complement(join(1631071..1631208,1631337..1631404,1631484..1631572,1631650..1631730,1631831..1631898,1632074..1632443,1632525..1632645,1632720..1632957,1633050..1633107,1633210..1633313,1633397..1633568,1633659..1633830,1633941..1633984,1634060..1634131,1634248..1634381,1634572..1634633,1634675..1635050))	Acanthamoeba castellanii str. Neff	14918507
ACA1_064530	CDS	ACA1_064530	NW_004457442.1	1635181	1637257	D	encoded by transcript ACA1_064530A; TBC domain containing protein	join(1635181..1635285,1635414..1635443,1635724..1635933,1635986..1636100,1636185..1636286,1636368..1636540,1636615..1636683,1636775..1636869,1636961..1637062,1637146..1637257)	Acanthamoeba castellanii str. Neff	14918508
ACA1_064540	CDS	ACA1_064540	NW_004457442.1	1637343	1639305	R	encoded by transcript ACA1_064540A; uncharacterized protein	complement(join(1637343..1637914,1638019..1638097,1638241..1638347,1638483..1639305))	Acanthamoeba castellanii str. Neff	14918509
ACA1_064550	CDS	ACA1_064550	NW_004457442.1	1639490	1641868	R	encoded by transcript ACA1_064550A; RNA binding protein	complement(join(1639490..1639549,1639622..1639689,1639780..1639853,1639951..1640072,1640166..1640354,1640420..1640538,1640689..1640903,1640993..1641466,1641556..1641690,1641798..1641868))	Acanthamoeba castellanii str. Neff	14918510
ACA1_064560	CDS	ACA1_064560	NW_004457442.1	1642421	1644292	D	encoded by transcript ACA1_064560A; uncharacterized protein	1642421..1644292	Acanthamoeba castellanii str. Neff	14918511
ACA1_064570	CDS	ACA1_064570	NW_004457442.1	1644446	1647240	D	encoded by transcript ACA1_064570A; Ras subfamily protein	join(1644446..1645234,1645355..1645492,1645561..1645623,1645711..1645850,1645939..1646047,1646102..1646422,1646505..1646653,1646731..1646942,1647017..1647240)	Acanthamoeba castellanii str. Neff	14918512
ACA1_064580	CDS	ACA1_064580	NW_004457442.1	1647344	1648947	R	encoded by transcript ACA1_064580A; 3hydroxybutyrate dehydrogenase	complement(join(1647344..1647407,1647527..1647661,1647775..1647856,1647933..1648001,1648156..1648303,1648372..1648461,1648560..1648723,1648806..1648947))	Acanthamoeba castellanii str. Neff	14918513
ACA1_064590	CDS	ACA1_064590	NW_004457442.1	1650194	1650991	D	encoded by transcript ACA1_064590A; homeobox domain containing protein	1650194..1650991	Acanthamoeba castellanii str. Neff	14918182
ACA1_064600	CDS	ACA1_064600	NW_004457442.1	1651251	1652137	R	encoded by transcript ACA1_064600A; lipoprotein, putative	complement(join(1651251..1651652,1651767..1651925,1652021..1652137))	Acanthamoeba castellanii str. Neff	14918183
ACA1_064610	CDS	ACA1_064610	NW_004457442.1	1652257	1655257	R	encoded by transcript ACA1_064610A; uncharacterized protein	complement(join(1652257..1654408,1654523..1654633,1654719..1654782,1654918..1655257))	Acanthamoeba castellanii str. Neff	14918184
ACA1_064620	CDS	ACA1_064620	NW_004457442.1	1655847	1661570	R	encoded by transcript ACA1_064620A; vacuolar sorting protein, putative	complement(join(1655847..1656003,1656094..1656185,1656272..1656388,1656465..1656551,1656641..1656765,1656872..1656960,1657068..1657177,1657261..1657956,1658048..1658113,1658237..1658323,1658432..1658566,1658701..1658906,1659007..1659160,1659230..1659271,1659351..1659456,1659636..1659690,1659771..1659910,1659982..1660062,1660135..1660196,1660319..1660406,1660512..1660621,1660739..1660783,1660873..1660971,1661101..1661208,1661346..1661570))	Acanthamoeba castellanii str. Neff	14918185
ACA1_064630	CDS	ACA1_064630	NW_004457442.1	1661847	1662292	D	encoded by transcript ACA1_064630A; stress responsive A/B barrel domain protein	join(1661847..1661970,1662123..1662292)	Acanthamoeba castellanii str. Neff	14918186
ACA1_064640	CDS	ACA1_064640	NW_004457442.1	1662463	1664101	R	encoded by transcript ACA1_064640A; farnesyltransferase/geranylgeranyltransferase, putative	complement(join(1662463..1662549,1662673..1662892,1663006..1663102,1663231..1663332,1663425..1663501,1663565..1663669,1663771..1663880,1664045..1664101))	Acanthamoeba castellanii str. Neff	14918187
ACA1_064650	CDS	ACA1_064650	NW_004457442.1	1664269	1664862	R	encoded by transcript ACA1_064650A; ribosomal S29 subunit	complement(join(1664269..1664521,1664801..1664862))	Acanthamoeba castellanii str. Neff	14918188
ACA1_064660	CDS	ACA1_064660	NW_004457442.1	1665107	1666452	R	encoded by transcript ACA1_064660A; uncharacterized protein	complement(join(1665107..1665219,1665313..1665382,1665456..1665571,1665665..1665790,1665899..1665960,1666055..1666161,1666276..1666452))	Acanthamoeba castellanii str. Neff	14918189
ACA1_064670	CDS	ACA1_064670	NW_004457442.1	1666840	1667554	D	encoded by transcript ACA1_064670A; NADHubiquinone oxidoreductase, putative	join(1666840..1667305,1667436..1667554)	Acanthamoeba castellanii str. Neff	14918190
ACA1_064680	CDS	ACA1_064680	NW_004457442.1	1667712	1669863	R	encoded by transcript ACA1_064680A; PB1 domain containing protein	complement(join(1667712..1668012,1668095..1669863))	Acanthamoeba castellanii str. Neff	14918191
ACA1_064690	CDS	ACA1_064690	NW_004457442.1	1670939	1673429	R	encoded by transcript ACA1_064690A; uncharacterized protein	complement(join(1670939..1671030,1671177..1671407,1671478..1671670,1671758..1672057,1672158..1672208,1672292..1672436,1672512..1672672,1672748..1672837,1672911..1673005,1673107..1673196,1673280..1673348,1673384..1673429))	Acanthamoeba castellanii str. Neff	14918192
ACA1_064700	CDS	ACA1_064700	NW_004457442.1	1673714	1676200	R	encoded by transcript ACA1_064700A; Tcomplex protein 1, gamma subunit	complement(join(1673714..1673966,1674093..1674262,1674364..1674466,1674677..1674857,1674929..1675211,1675310..1675614,1675728..1676000,1676176..1676200))	Acanthamoeba castellanii str. Neff	14918193
ACA1_064710	CDS	ACA1_064710	NW_004457442.1	1676392	1677173	R	encoded by transcript ACA1_064710A; uncharacterized protein	complement(join(1676392..1676510,1676572..1676650,1676714..1676771,1676858..1676902,1676977..1677173))	Acanthamoeba castellanii str. Neff	14918194
ACA1_064720	CDS	ACA1_064720	NW_004457442.1	1677374	1678233	R	encoded by transcript ACA1_064720A; uncharacterized protein	complement(join(1677374..1677654,1677729..1677782,1677870..1677945,1678052..1678132,1678198..>1678233))	Acanthamoeba castellanii str. Neff	14918195
ACA1_064730	CDS	ACA1_064730	NW_004457442.1	1679566	1683349	D	encoded by transcript ACA1_064730A; RNA recognition motif (RRM)containing protein	join(1679566..1680447,1680518..1680634,1680719..1680862,1681021..1681197,1681281..1681400,1681507..1681594,1681688..1681858,1682004..1682063,1682147..1682440,1682520..1682584,1682673..1682971,1683065..1683194,1683290..1683349)	Acanthamoeba castellanii str. Neff	14918196
ACA1_064740	CDS	ACA1_064740	NW_004457442.1	1684177	1684879	R	encoded by transcript ACA1_064740A; helicase C-terminal domain containing protein, putative	complement(join(1684177..1684543,1684629..1684879))	Acanthamoeba castellanii str. Neff	14918197
ACA1_064750	CDS	ACA1_064750	NW_004457442.1	1685446	1686713	R	encoded by transcript ACA1_064750A; uncharacterized protein	complement(join(1685446..1685508,1685650..1685792,1685961..1686088,1686169..1686713))	Acanthamoeba castellanii str. Neff	14918198
ACA1_064760	CDS	ACA1_064760	NW_004457442.1	1687051	1687598	R	encoded by transcript ACA1_064760A; uncharacterized protein	complement(join(1687051..1687193,1687313..1687350,1687486..1687598))	Acanthamoeba castellanii str. Neff	14918199
ACA1_064770	CDS	ACA1_064770	NW_004457442.1	1689604	1691233	R	encoded by transcript ACA1_064770A; uncharacterized protein	complement(join(1689604..1689998,1690674..1690820,1690925..1691048,1691120..>1691233))	Acanthamoeba castellanii str. Neff	14918200
ACA1_064780	CDS	ACA1_064780	NW_004457442.1	1691772	1692092	D	encoded by transcript ACA1_064780A; uncharacterized protein	1691772..1692092	Acanthamoeba castellanii str. Neff	14918201
ACA1_064790	CDS	ACA1_064790	NW_004457442.1	1694620	1694969	D	encoded by transcript ACA1_064790A; uncharacterized protein	join(1694620..1694639,1694786..1694969)	Acanthamoeba castellanii str. Neff	14918202
ACA1_064800	CDS	ACA1_064800	NW_004457442.1	1695678	1702674	R	encoded by transcript ACA1_064800A; serine/threonine kinase	complement(join(1695678..1696399,1696479..1697054,1697115..1697377,1697457..1698494,1698570..1698769,1698785..1699009,1699080..1699196,1699269..1699528,1699612..1699856,1699902..1700082,1700164..1700302,1700373..1700516,1700576..1700889,1700988..1701340,1701433..1701746,1701844..1702155,1702229..1702366,1702445..1702529,1702589..1702674))	Acanthamoeba castellanii str. Neff	14918203
ACA1_064810	CDS	ACA1_064810	NW_004457442.1	1703608	1705916	R	encoded by transcript ACA1_064810A; transporter, major facilitator subfamily protein	complement(join(1703608..1703861,1703982..1704086,1704148..1704201,1704284..1704388,1704470..1704648,1704719..1704788,1705022..1705187,1705220..1705367,1705475..1705544,1705629..1705676,1705748..1705832,1705890..1705916))	Acanthamoeba castellanii str. Neff	14917776
ACA1_064820	CDS	ACA1_064820	NW_004457442.1	1706754	1707344	R	encoded by transcript ACA1_064820A; rho family, small GTP binding protein Rac3, putative	complement(1706754..1707344)	Acanthamoeba castellanii str. Neff	14917777
ACA1_064830	CDS	ACA1_064830	NW_004457442.1	1707844	1709724	R	encoded by transcript ACA1_064830A; uncharacterized protein	complement(join(1707844..1708045,1708155..1708915,1708931..1709090,1709224..1709337,1709417..1709724))	Acanthamoeba castellanii str. Neff	14917778
ACA1_064840	CDS	ACA1_064840	NW_004457442.1	1710034	1712431	R	encoded by transcript ACA1_064840A; rieske [2fe2s] domain containing protein	complement(join(1710034..1710084,1710161..1710241,1710344..1710470,1710528..1710605,1710675..1710777,1710845..1710926,1711007..1711090,1711168..1711225,1711307..1711398,1711472..1711761,1711828..1711945,1712040..1712127,1712199..1712296,1712387..>1712431))	Acanthamoeba castellanii str. Neff	14917779
ACA1_064850	CDS	ACA1_064850	NW_004457442.1	1712838	1713988	R	encoded by transcript ACA1_064850A; uncharacterized protein	complement(join(1712838..1713025,1713092..1713576,1713702..1713988))	Acanthamoeba castellanii str. Neff	14917780
ACA1_064860	CDS	ACA1_064860	NW_004457442.1	1714314	1715237	D	encoded by transcript ACA1_064860A; ubiquitin thioesterase otubainlike, putative	join(1714314..1714476,1714574..1714844,1714937..1715237)	Acanthamoeba castellanii str. Neff	14917781
ACA1_064870	CDS	ACA1_064870	NW_004457442.1	1715978	1716421	R	encoded by transcript ACA1_064870A; ubiquitin domain containing protein	complement(join(1715978..1716055,1716152..1716198,1716274..1716421))	Acanthamoeba castellanii str. Neff	14917782
ACA1_064880	CDS	ACA1_064880	NW_004457442.1	1716727	1717159	D	encoded by transcript ACA1_064880A; uncharacterized protein	join(1716727..1716854,1716937..1716964,1717061..1717159)	Acanthamoeba castellanii str. Neff	14917783
ACA1_064890	CDS	ACA1_064890	NW_004457442.1	1717956	1719686	D	encoded by transcript ACA1_064890A; uncharacterized protein	1717956..1719686	Acanthamoeba castellanii str. Neff	14917784
ACA1_064900	CDS	ACA1_064900	NW_004457442.1	1720101	1720784	R	encoded by transcript ACA1_064900A; NADdependent deacetylase sirtuin 2, putative	complement(join(1720101..1720186,1720264..1720381,1720467..1720582,1720670..1720784))	Acanthamoeba castellanii str. Neff	14917785
ACA1_064910	CDS	ACA1_064910	NW_004457442.1	1720815	1722178	R	encoded by transcript ACA1_064910A; NADdependent deacetylase sirtuin, putative	complement(join(1720815..1720908,1721021..1721094,1721176..1721261,1721368..1721446,1721534..1721643,1721810..1721898,1721970..1722018,1722088..1722178))	Acanthamoeba castellanii str. Neff	14917786
ACA1_064920	CDS	ACA1_064920	NW_004457442.1	1722478	1724773	D	encoded by transcript ACA1_064920A; branchedchain amino acid aminotransferase	join(1722478..1722609,1722817..1722929,1723019..1723106,1723206..1723316,1723408..1723527,1723634..1723726,1723805..1723878,1723964..1724103,1724243..1724360,1724441..1724558,1724651..1724773)	Acanthamoeba castellanii str. Neff	14917787
ACA1_064930	CDS	ACA1_064930	NW_004457442.1	1725629	1728812	R	encoded by transcript ACA1_064930A; uncharacterized protein	complement(join(1725629..1726058,1726270..1726492,1726562..1726613,1726710..1726931,1727013..1727454,1727563..1727666,1727769..1727935,1728013..1728169,1728261..1728397,1728454..1728492,1728692..1728812))	Acanthamoeba castellanii str. Neff	14917788
ACA1_064940	CDS	ACA1_064940	NW_004457442.1	1728906	1729741	D	encoded by transcript ACA1_064940A; Fbox domain containing protein	join(1728906..1729023,1729098..1729330,1729420..1729568,1729675..1729741)	Acanthamoeba castellanii str. Neff	14917789
ACA1_064950	CDS	ACA1_064950	NW_004457442.1	1730033	1731337	D	encoded by transcript ACA1_064950A; uncharacterized protein	join(1730033..1730203,1730279..1730321,1730397..1730683,1730906..1731337)	Acanthamoeba castellanii str. Neff	14917790
ACA1_064960	CDS	ACA1_064960	NW_004457442.1	1731563	1733849	D	encoded by transcript ACA1_064960A; MYND finger domain containing protein	join(1731563..1731659,1731750..1731852,1731959..1732047,1732115..1732184,1732283..1732385,1732469..1732601,1732690..1732842,1732931..1733053,1733178..1733339,1733411..1733559,1733643..1733849)	Acanthamoeba castellanii str. Neff	14917791
ACA1_064970	CDS	ACA1_064970	NW_004457442.1	1733935	1734448	R	encoded by transcript ACA1_064970A; uncharacterized protein	complement(join(1733935..1734284,1734313..1734448))	Acanthamoeba castellanii str. Neff	14917792
ACA1_064980	CDS	ACA1_064980	NW_004457442.1	1734698	1744722	R	encoded by transcript ACA1_064980A; uncharacterized protein	complement(join(1734698..1734820,1734921..1735047,1735150..1735246,1735344..1735554,1735647..1735778,1735860..1735946,1736068..1736229,1736318..1736437,1736511..1736713,1736838..1737194,1737264..1737432,1737514..1737678,1737794..1737931,1738028..1738216,1738305..1738415,1738489..1738623,1738732..1738935,1739030..1739086,1739261..1739509,1739591..1739673,1739794..1739941,1740016..1740128,1740229..1740444,1740517..1740614,1740786..1741015,1741084..1741239,1741332..1741433,1741519..1741664,1741777..1741917,1742027..1742125,1742205..1742470,1742581..1742966,1743065..1743168,1743210..1743291,1743375..1743497,1743577..1743691,1743791..1743904,1743997..1744130,1744210..1744419,1744540..1744722))	Acanthamoeba castellanii str. Neff	14917793
ACA1_064990	CDS	ACA1_064990	NW_004457442.1	1745522	1747886	D	encoded by transcript ACA1_064990A; uncharacterized protein	join(1745522..1745699,1745797..1745894,1745985..1746126,1746210..1746311,1746391..1746486,1746678..1746733,1746805..1747484,1747522..1747676,1747744..1747886)	Acanthamoeba castellanii str. Neff	14917794
ACA1_065000	CDS	ACA1_065000	NW_004457442.1	1748312	1750653	D	encoded by transcript ACA1_065000A; uncharacterized protein	join(1748312..1748392,1748505..1749033,1749132..1749287,1749370..1749515,1749611..1749708,1749783..1750653)	Acanthamoeba castellanii str. Neff	14917795
ACA1_065010	CDS	ACA1_065010	NW_004457442.1	1751648	1752991	D	encoded by transcript ACA1_065010A; metal cation transporter, ZIP subfamily protein	join(1751648..1751723,1751842..1752439,1752564..1752755,1752817..1752991)	Acanthamoeba castellanii str. Neff	14918388
ACA1_065020	CDS	ACA1_065020	NW_004457442.1	1753889	1755922	R	encoded by transcript ACA1_065020A; uncharacterized protein	complement(join(1753889..1753933,1753950..1753982,1754060..1754309,1754396..1755421,1755499..1755690,1755867..1755922))	Acanthamoeba castellanii str. Neff	14918389
ACA1_065030	CDS	ACA1_065030	NW_004457442.1	1756596	1757358	D	encoded by transcript ACA1_065030A; uncharacterized protein	join(1756596..1756782,1756859..1757358)	Acanthamoeba castellanii str. Neff	14918390
ACA1_065040	CDS	ACA1_065040	NW_004457442.1	1757536	1760771	R	encoded by transcript ACA1_065040A; SIT4 phosphatase-associated protein	complement(join(1757536..1757855,1757939..1758083,1758213..1758395,1758538..1758677,1758748..1758823,1759023..1759273,1759392..1759545,1759657..1759755,1759834..1759975,1760087..1760160,1760268..1760325,1760431..1760566,1760711..1760771))	Acanthamoeba castellanii str. Neff	14918391
ACA1_065060	CDS	ACA1_065060	NW_004457442.1	1763827	1765686	R	encoded by transcript ACA1_065060A; Histone-lysine N-methyltransferase	complement(join(1763827..1764218,1764308..1764411,1764494..1764672,1764758..1764820,1764999..1765214,1765289..1765384,1765477..1765686))	Acanthamoeba castellanii str. Neff	14918393
ACA1_065070	CDS	ACA1_065070	NW_004457442.1	1765770	1774508	R	encoded by transcript ACA1_065070A; nuclear helicase, putative	complement(join(1765770..1765898,1766012..1766090,1766169..1766258,1766342..1766436,1766536..1766652,1766721..1766838,1766919..1767016,1767097..1767320,1767399..1767467,1767541..1767654,1767729..1767884,1767957..1768068,1768141..1768232,1768313..1768412,1768527..1768727,1768805..1768912,1768956..1769025,1769105..1769223,1769298..1769579,1769671..1769808,1769870..1770010,1770082..1770163,1770249..1770330,1770425..1770509,1770574..1770682,1770718..1770885,1770968..1771105,1771170..1771276,1771352..1771522,1771596..1771705,1771792..1771911,1772013..1772108,1772179..1772253,1772334..1772457,1772536..1772657,1772771..1772825,1772925..1773064,1773153..1773296,1773364..1773584,1773669..1773754,1773831..1774508))	Acanthamoeba castellanii str. Neff	14918394
ACA1_065080	CDS	ACA1_065080	NW_004457442.1	1774547	1776826	R	encoded by transcript ACA1_065080A; uncharacterized protein	complement(join(1774547..1776050,1776175..1776316,1776345..1776475,1776557..1776638,1776748..1776826))	Acanthamoeba castellanii str. Neff	14918395
ACA1_065090	CDS	ACA1_065090	NW_004457442.1	1777398	1783090	D	encoded by transcript ACA1_065090A; amine oxidase, flavincontaining superfamily protein	join(1777398..1777536,1777616..1777687,1777761..1777820,1777898..1777999,1778101..1778180,1778269..1778365,1778444..1778613,1778708..1780276,1780333..1780428,1780495..1780646,1780720..1780878,1780954..1781098,1781160..1781316,1781384..1781479,1781538..1782307,1782392..1782476,1782553..1782692,1782770..1783090)	Acanthamoeba castellanii str. Neff	14918396
ACA1_065100	CDS	ACA1_065100	NW_004457442.1	1784441	1786228	D	encoded by transcript ACA1_065100A; GATA zinc finger domain containing protein	join(1784441..1784721,1785132..1785207,1785312..1785399,1785507..1785649,1785725..1785879,1785964..1786029,1786114..1786228)	Acanthamoeba castellanii str. Neff	14918397
ACA1_065110	CDS	ACA1_065110	NW_004457442.1	1786675	1790229	D	encoded by transcript ACA1_065110A; oligopeptide transporter	join(1786675..1786742,1786804..1786916,1786980..1787176,1787296..1787426,1787518..1787689,1787792..1788053,1788164..1788235,1788444..1788531,1788624..1788805,1788927..1789046,1789134..1789186,1789269..1789353,1789454..1789585,1789676..1789871,1789964..1790067,1790144..1790229)	Acanthamoeba castellanii str. Neff	14918398
ACA1_065120	CDS	ACA1_065120	NW_004457442.1	1790421	1791217	D	encoded by transcript ACA1_065120A; ubiquitinconjugating enzyme, putative	join(1790421..1790545,1790779..1790963,1791063..1791217)	Acanthamoeba castellanii str. Neff	14918399
ACA1_065130	CDS	ACA1_065130	NW_004457442.1	1791698	1794427	D	encoded by transcript ACA1_065130A; ammonium transporter, putative	join(1791698..1791792,1791961..1792076,1792172..1792350,1792410..1792582,1792657..1792797,1792877..1793055,1793130..1793231,1793331..1793419,1793504..1793607,1793673..1793791,1793890..1794371,1794419..1794427)	Acanthamoeba castellanii str. Neff	14918400
ACA1_065140	CDS	ACA1_065140	NW_004457442.1	1794691	1797049	R	encoded by transcript ACA1_065140A; uncharacterized protein	complement(join(1794691..1794800,1794902..1794985,1795066..1795140,1795238..1795309,1795404..1795557,1795726..1795924,1796007..1796084,1796209..1796282,1796388..1796456,1796546..1796643,1796722..1796812,1796939..1797049))	Acanthamoeba castellanii str. Neff	14918401
ACA1_065150	CDS	ACA1_065150	NW_004457442.1	1797173	1798250	R	encoded by transcript ACA1_065150A; uncharacterized protein	complement(join(1797173..1797365,1797606..1797713,1797785..1797879,1797992..1798064,1798135..1798250))	Acanthamoeba castellanii str. Neff	14918402
ACA1_065160	CDS	ACA1_065160	NW_004457442.1	1798920	1802442	D	encoded by transcript ACA1_065160A; Armadillo/betacatenin-like repeat domain containing protein	join(1798920..1798924,1798939..1799030,1799129..1799251,1799328..1799441,1799507..1799641,1799710..1799955,1800027..1800149,1800221..1800662,1800768..1801033,1801177..1801308,1801383..1801541,1801621..1801770,1801860..1802009,1802087..1802442)	Acanthamoeba castellanii str. Neff	14918403
ACA1_065180	CDS	ACA1_065180	NW_004457442.1	1807100	1810066	D	encoded by transcript ACA1_065180A; uncharacterized protein	join(1807100..1807534,1807633..1808019,1808086..1808214,1808297..1808394,1808476..1808622,1808684..1808785,1808859..1809008,1809072..1809580,1809690..1810066)	Acanthamoeba castellanii str. Neff	14918405
ACA1_065190	CDS	ACA1_065190	NW_004457442.1	1809745	1813482	R	encoded by transcript ACA1_065190A; IBR domain containing protein	complement(join(1809745..1810034,1810246..1810301,1810365..1810463,1810577..1810775,1810884..1810939,1811048..1811319,1811394..1811441,1811584..1811641,1811730..1811810,1811899..1811953,1812104..1812251,1812336..1812472,1812581..1812945,1813029..1813141,1813215..1813313,1813402..1813482))	Acanthamoeba castellanii str. Neff	14918406
ACA1_065200	CDS	ACA1_065200	NW_004457442.1	1814139	1814690	D	encoded by transcript ACA1_065200A; uncharacterized protein	join(1814139..1814213,1814247..1814690)	Acanthamoeba castellanii str. Neff	14918138
ACA1_065210	CDS	ACA1_065210	NW_004457442.1	1814945	1816784	D	encoded by transcript ACA1_065210A; 3hydroxyisobutyryl-CoA hydrolase, putative	join(1814945..1815106,1815195..1815279,1815356..1815514,1815586..1815722,1815797..1815858,1815939..1816072,1816139..1816194,1816253..1816441,1816518..1816570,1816658..1816784)	Acanthamoeba castellanii str. Neff	14918139
ACA1_065220	CDS	ACA1_065220	NW_004457442.1	1817090	1825037	D	encoded by transcript ACA1_065220A; Fbox domain containing protein	join(1817090..1817222,1817264..1817288,1817300..1817536,1817608..1817686,1817747..1817861,1817945..1818129,1818229..1818438,1818527..1818632,1818757..1818866,1818941..1819052,1819202..1819337,1819478..1819951,1820050..1820516,1820600..1820932,1821041..1821129,1821279..1821505,1821728..1821857,1821950..1822095,1822208..1822535,1822624..1822691,1822800..1822881,1822999..1823079,1823191..1823939,1824028..1824088,1824369..1825037)	Acanthamoeba castellanii str. Neff	14918140
ACA1_065230	CDS	ACA1_065230	NW_004457442.1	1825101	1830570	R	encoded by transcript ACA1_065230A; leucine rich repeat domain containing protein	complement(join(1825101..1825223,1825310..1825427,1825552..1825720,1825809..1825930,1826043..1826122,1826249..1826348,1826454..1826518,1826635..1826891,1826972..1827080,1827204..1827314,1827537..1827613,1827708..1827836,1827915..1828037,1828136..1828318,1828390..1828837,1828928..1829013,1829114..1829279,1829368..1829496,1829688..1829809,1829930..1830020,1830087..1830126,1830269..1830570))	Acanthamoeba castellanii str. Neff	14918141
ACA1_065240	CDS	ACA1_065240	NW_004457442.1	1831502	1832108	D	encoded by transcript ACA1_065240A; glutaredoxin, putative	join(1831502..1831566,1831687..1831760,1831859..1831965,1832043..1832108)	Acanthamoeba castellanii str. Neff	14918142
ACA1_065250	CDS	ACA1_065250	NW_004457442.1	1832392	1832927	R	encoded by transcript ACA1_065250A; uncharacterized protein	complement(join(1832392..1832582,1832660..1832927))	Acanthamoeba castellanii str. Neff	14918143
ACA1_065260	CDS	ACA1_065260	NW_004457442.1	1833202	1834951	D	encoded by transcript ACA1_065260A; IBR domain containing protein	join(1833202..1833226,1833306..1833410,1833791..1833870,1833968..1834045,1834122..1834210,1834281..1834475,1834579..1834787,1834872..1834951)	Acanthamoeba castellanii str. Neff	14918144
ACA1_065270	CDS	ACA1_065270	NW_004457442.1	1835063	1841158	D	encoded by transcript ACA1_065270A; ubiquitin ligase, putative	join(1835063..1835156,1835271..1835406,1835501..1835572,1835652..1835883,1835995..1836480,1836563..1836722,1836804..1836883,1837007..1837121,1837193..1837307,1837383..1837581,1837649..1837808,1837880..1838068,1838142..1838299,1838372..1838615,1838752..1838852,1838950..1839053,1839145..1839266,1839346..1839516,1839590..1839686,1839938..1840055,1840175..1840369,1840400..1840455,1840533..1840678,1840752..1840905,1840999..1841158)	Acanthamoeba castellanii str. Neff	14918145
ACA1_065280	CDS	ACA1_065280	NW_004457442.1	1841513	1842649	D	encoded by transcript ACA1_065280A; uncharacterized protein	join(1841513..1842027,1842325..1842649)	Acanthamoeba castellanii str. Neff	14918146
ACA1_065290	CDS	ACA1_065290	NW_004457442.1	1842811	1843350	R	encoded by transcript ACA1_065290A; GATA zinc finger domain containing protein	complement(join(1842811..1842940,1843007..>1843350))	Acanthamoeba castellanii str. Neff	14918147
ACA1_065400	CDS	ACA1_065400	NW_004457442.1	1844932	1845968	R	encoded by transcript ACA1_065400A; uncharacterized protein	complement(join(1844932..1845241,1845403..1845732,1845811..1845968))	Acanthamoeba castellanii str. Neff	14918148
ACA1_065410	CDS	ACA1_065410	NW_004457442.1	1846795	1848047	D	encoded by transcript ACA1_065410A; uncharacterized protein	join(1846795..1846817,1847038..1847479,1847517..1847588,1847685..1848047)	Acanthamoeba castellanii str. Neff	14918149
ACA1_065420	CDS	ACA1_065420	NW_004457442.1	1848993	1849363	D	encoded by transcript ACA1_065420A; uncharacterized protein	join(1848993..1849278,1849305..1849363)	Acanthamoeba castellanii str. Neff	14918150
ACA1_065430	CDS	ACA1_065430	NW_004457442.1	1850795	1851394	D	encoded by transcript ACA1_065430A; uncharacterized protein	join(1850795..1850863,1851005..1851394)	Acanthamoeba castellanii str. Neff	14918151
ACA1_065440	CDS	ACA1_065440	NW_004457442.1	1852046	1852678	D	encoded by transcript ACA1_065440A; uncharacterized protein	join(1852046..1852081,1852127..1852678)	Acanthamoeba castellanii str. Neff	14918152
ACA1_065450	CDS	ACA1_065450	NW_004457442.1	1853268	1858172	R	encoded by transcript ACA1_065450A; sodium Ptype ATPase	complement(join(1853268..1853683,1853762..1854001,1854067..1854162,1854228..1854417,1854463..1854586,1854661..1854726,1854801..1854901,1855044..1855162,1855248..1855330,1855396..1855516,1855591..1855695,1855770..1855835,1855918..1856131,1856219..1856385,1856458..1856637,1856726..1856798,1856869..1856985,1857068..1857169,1857226..1857470,1857559..1857717,1857791..1858172))	Acanthamoeba castellanii str. Neff	14918153
ACA1_065460	CDS	ACA1_065460	NW_004457442.1	1858580	1863269	R	encoded by transcript ACA1_065460A; RhoGAP domain containing protein	complement(join(1858580..1858681,1858757..1858850,1858949..1859119,1859197..1859341,1859422..1860443,1860582..1860738,1860817..1860882,1861028..1861165,1861230..1861307,1861384..1861479,1861549..1861771,1861864..1861974,1862055..1862147,1862233..1862304,1862369..1862430,1862509..1862580,1862734..1862806,1862892..1863269))	Acanthamoeba castellanii str. Neff	14918154
ACA1_065470	CDS	ACA1_065470	NW_004457442.1	1863582	1865577	R	encoded by transcript ACA1_065470A; dual specificity phosphatase, putative	complement(join(1863582..1864272,1864380..1864474,1864547..1864772,1864841..1864920,1864993..1865152,1865393..1865577))	Acanthamoeba castellanii str. Neff	14918155
ACA1_065480	CDS	ACA1_065480	NW_004457442.1	1866229	1866969	R	encoded by transcript ACA1_065480A; uncharacterized protein	complement(join(1866229..1866300,1866311..1866370,1866451..1866969))	Acanthamoeba castellanii str. Neff	14917977
ACA1_065590	CDS	ACA1_065590	NW_004457442.1	1867766	1868311	D	encoded by transcript ACA1_065590A; uncharacterized protein	<1867766..1868311	Acanthamoeba castellanii str. Neff	14917978
ACA1_065700	CDS	ACA1_065700	NW_004457442.1	1873141	1875791	D	encoded by transcript ACA1_065700A; serine/threonine kinase	join(1873141..1873157,1873244..1873378,1873504..1873717,1873786..1873819,1873893..1874072,1874150..1874213,1874283..1874325,1874391..1874573,1874677..1874730,1874829..1874885,1874968..1875010,1875082..1875275,1875409..1875549,1875687..1875791)	Acanthamoeba castellanii str. Neff	14917979
ACA1_065710	CDS	ACA1_065710	NW_004457442.1	1876830	1877956	D	encoded by transcript ACA1_065710A; GATA zinc finger domain containing protein	join(1876830..1877483,1877565..1877668,1877755..1877956)	Acanthamoeba castellanii str. Neff	14917980
ACA1_065720	CDS	ACA1_065720	NW_004457442.1	1878546	1879027	R	encoded by transcript ACA1_065720A; ribosomal protein S8, putative	complement(join(1878546..1878805,1878895..1879027))	Acanthamoeba castellanii str. Neff	14917981
ACA1_065740	CDS	ACA1_065740	NW_004457442.1	1888291	1888673	R	encoded by transcript ACA1_065740A; glutaredoxin, putative	complement(join(1888291..1888368,1888431..1888673))	Acanthamoeba castellanii str. Neff	14917983
ACA1_065750	CDS	ACA1_065750	NW_004457442.1	1888788	1890455	R	encoded by transcript ACA1_065750A; uncharacterized protein	complement(join(1888788..1888908,1889155..1889253,1889360..1889466,1889552..1889614,1889715..1890119,1890204..1890455))	Acanthamoeba castellanii str. Neff	14917984
ACA1_065760	CDS	ACA1_065760	NW_004457442.1	1890633	1891656	R	encoded by transcript ACA1_065760A; uncharacterized protein	complement(join(1890633..1890788,1890869..1891142,1891222..1891366,1891443..1891656))	Acanthamoeba castellanii str. Neff	14917985
ACA1_065770	CDS	ACA1_065770	NW_004457442.1	1892206	1901658	R	encoded by transcript ACA1_065770A; phosphatidylinositol 3kinase	complement(join(1892206..1892367,1892471..1892592,1892677..1892804,1892878..1892965,1893043..1893169,1893262..1893327,1893417..1893542,1893641..1893695,1893763..1893940,1894025..1894234,1894335..1894470,1894653..1894780,1894852..1895053,1895213..1895396,1895511..1895650,1895745..1895862,1895976..1896370,1896453..1896560,1896651..1896730,1896831..1896912,1897001..1897082,1897172..1897283,1897453..1898478,1898541..1898631,1898717..1898790,1898964..1899025,1899134..1899228,1899330..1899509,1899604..1899773,1899820..1899871,1899948..1900093,1900188..1900285,1900357..1900657,1900697..1900889,1900998..1901060,1901137..1901208,1901362..1901658))	Acanthamoeba castellanii str. Neff	14917986
ACA1_065780	CDS	ACA1_065780	NW_004457442.1	1902479	1903351	D	encoded by transcript ACA1_065780A; SRFtype transcription factor (DNA-binding and dimerization domain) domain containing protein	join(1902479..1902736,1902854..1903351)	Acanthamoeba castellanii str. Neff	14917987
ACA1_065790	CDS	ACA1_065790	NW_004457442.1	1904369	1905051	D	encoded by transcript ACA1_065790A; phosphate ABC transporter, periplasmic phosphatebinding protein	join(1904369..1904416,1904544..1904669,1904743..1905051)	Acanthamoeba castellanii str. Neff	14917988
ACA1_065800	CDS	ACA1_065800	NW_004457442.1	1905143	1911452	D	encoded by transcript ACA1_065800A; serine/threonine kinase	join(1905143..1905266,1905307..1905592,1905691..1905878,1905947..1906059,1906149..1906382,1906463..1906721,1906802..1906959,1907076..1907556,1907642..1907742,1907829..1908187,1908282..1908438,1908513..1908678,1908756..1908969,1909069..1909381,1909456..1909564,1909639..1909952,1910053..1910221,1910292..1910597,1910664..1910988,1911233..1911452)	Acanthamoeba castellanii str. Neff	14917989
ACA1_065810	CDS	ACA1_065810	NW_004457442.1	1912340	1913722	R	encoded by transcript ACA1_065810A; serpin (serine proteinase inhibitor) superfamily protein	complement(join(1912340..1912571,1912650..1913114,1913180..1913394,1913456..1913722))	Acanthamoeba castellanii str. Neff	14917990
ACA1_065820	CDS	ACA1_065820	NW_004457442.1	1914028	1918303	D	encoded by transcript ACA1_065820A; BRCA1 domain containing protein	join(1914028..1914303,1914429..1914530,1914642..1914749,1914884..1915000,1915098..1915171,1915262..1915908,1916007..1916503,1916609..1916764,1916854..1916978,1917053..1917125,1917215..1917347,1917427..1918118,1918205..1918303)	Acanthamoeba castellanii str. Neff	14917991
ACA1_065830	CDS	ACA1_065830	NW_004457442.1	1918725	1920759	R	encoded by transcript ACA1_065830A; uncharacterized protein	complement(join(1918725..1918735,1918904..1918952,1919301..1919740,1919823..1919901,1919975..1920051,1920129..1920759))	Acanthamoeba castellanii str. Neff	14917992
ACA1_065840	CDS	ACA1_065840	NW_004457442.1	1921174	1922778	D	encoded by transcript ACA1_065840A; peroxisomal D3,D2enoyl-CoA isomerase isoform 1 variant, putative	join(1921174..1921317,1921420..1921510,1921619..1921696,1921771..1921822,1921943..1922033,1922120..1922227,1922299..1922361,1922465..1922538,1922709..1922778)	Acanthamoeba castellanii str. Neff	14917993
ACA1_065860	CDS	ACA1_065860	NW_004457442.1	1929859	1934656	R	encoded by transcript ACA1_065860A; ATPase, AAA domain containing protein	complement(join(1929859..1929986,1930049..1930310,1930405..1930498,1930569..1930850,1930988..1931087,1931182..1931278,1931329..1931588,1931658..1931749,1931826..1931920,1931992..1932091,1932299..1932364,1932403..1932621,1932713..1932904,1932980..1933103,1933180..1933311,1933374..1933515,1933595..1933822,1933900..1934028,1934095..1934186,1934283..1934528,1934587..1934656))	Acanthamoeba castellanii str. Neff	14917995
ACA1_065870	CDS	ACA1_065870	NW_004457442.1	1934907	1936467	D	encoded by transcript ACA1_065870A; uncharacterized protein	join(1934907..1936076,1936156..1936467)	Acanthamoeba castellanii str. Neff	14917996
ACA1_065880	CDS	ACA1_065880	NW_004457442.1	1936152	1939643	R	encoded by transcript ACA1_065880A; leucine rich repeat domain containing protein	complement(join(1936152..1936263,1936345..1936436,1936643..1937877,1937975..1938203,1938279..1938438,1938508..1938690,1938900..1938981,1939089..1939177,1939251..1939360,1939608..1939643))	Acanthamoeba castellanii str. Neff	14917997
ACA1_065890	CDS	ACA1_065890	NW_004457442.1	1939728	1941758	D	encoded by transcript ACA1_065890A; betalactamase	join(1939728..1939824,1939895..1939971,1940042..1940150,1940278..1940423,1940539..1940912,1941005..1941150,1941247..1941533,1941600..1941758)	Acanthamoeba castellanii str. Neff	14918204
ACA1_065900	CDS	ACA1_065900	NW_004457442.1	1941876	1943349	R	encoded by transcript ACA1_065900A; Lgalactose-1-phosphate phosphatase	complement(join(1941876..1942129,1942220..1942408,1942543..1942637,1942712..1942857,1942985..1943053,1943143..1943201,1943307..1943349))	Acanthamoeba castellanii str. Neff	14918205
ACA1_065910	CDS	ACA1_065910	NW_004457442.1	1944532	1946880	D	encoded by transcript ACA1_065910A; uncharacterized protein	join(1944532..1944900,1945002..1945204,1945278..1945634,1945718..1945841,1945920..1946046,1946136..1946593,1946773..1946880)	Acanthamoeba castellanii str. Neff	14918206
ACA1_065920	CDS	ACA1_065920	NW_004457442.1	1946769	1951253	R	encoded by transcript ACA1_065920A; protein kinase domain containing protein	complement(join(1946769..1947186,1947280..1947788,1947859..1947918,1947985..1948075,1948190..1948263,1948352..1948406,1948494..1948677,1948748..1948832,1948954..1949045,1949154..1949273,1949335..1949589,1949665..1949817,1949902..1949985,1950091..1950162,1950263..1950475,1950565..1950748,1950840..1950955,1951100..1951253))	Acanthamoeba castellanii str. Neff	14918207
ACA1_065930	CDS	ACA1_065930	NW_004457442.1	1951476	1953744	R	encoded by transcript ACA1_065930A; cytochrome p450 superfamily protein	complement(join(1951476..1951637,1951723..1951888,1951962..1952089,1952170..1952229,1952324..1952426,1952499..1953141,1953153..1953324,1953350..1953415,1953483..1953599,1953673..1953744))	Acanthamoeba castellanii str. Neff	14918208
ACA1_065940	CDS	ACA1_065940	NW_004457442.1	1953826	1959350	D	encoded by transcript ACA1_065940A; HEAT repeat domain containing protein	join(1953826..1953922,1954044..1954112,1954185..1954410,1954466..1954572,1954644..1954786,1954864..1954964,1955043..1955130,1955197..1955295,1955379..1955504,1955581..1955689,1955783..1955920,1955992..1956062,1956137..1956232,1956305..1956366,1956445..1956584,1956618..1956809,1956901..1957073,1957150..1957317,1957384..1957479,1957558..1957714,1957814..1957932,1958028..1958128,1958205..1958292,1958375..1958530,1958622..1958789,1958870..1958951,1959068..1959146,1959194..1959350)	Acanthamoeba castellanii str. Neff	14918209
ACA1_065950	CDS	ACA1_065950	NW_004457442.1	1959529	1961122	D	encoded by transcript ACA1_065950A; programmed cell death protein 6, putative	join(1959529..1959546,1959598..1959646,1959752..1959831,1959950..1960115,1960249..1960396,1960524..1960670,1960936..1961122)	Acanthamoeba castellanii str. Neff	14918210
ACA1_065960	CDS	ACA1_065960	NW_004457442.1	1960816	1962975	R	encoded by transcript ACA1_065960A; uncharacterized protein	complement(1960816..1962975)	Acanthamoeba castellanii str. Neff	14918211
ACA1_065970	CDS	ACA1_065970	NW_004457442.1	1963614	1964339	R	encoded by transcript ACA1_065970A; universal stress domain containing protein	complement(join(1963614..1963755,1963877..1963947,1964011..1964112,1964211..1964339))	Acanthamoeba castellanii str. Neff	14918212
ACA1_065980	CDS	ACA1_065980	NW_004457442.1	1964543	1968551	R	encoded by transcript ACA1_065980A; periodic tryptophan protein 2, putative	complement(join(1964543..1964852,1964974..1965087,1965154..1965233,1965319..1965450,1965527..1965759,1965844..1966367,1966452..1966562,1966639..1966776,1966845..1966998,1967092..1967208,1967271..1967447,1967570..1967876,1967940..1968121,1968215..1968412,1968506..1968551))	Acanthamoeba castellanii str. Neff	14918213
ACA1_065990	CDS	ACA1_065990	NW_004457442.1	1969242	1969757	R	encoded by transcript ACA1_065990A; uncharacterized protein	complement(1969242..1969757)	Acanthamoeba castellanii str. Neff	14918214
ACA1_066000	CDS	ACA1_066000	NW_004457442.1	1970229	1971455	D	encoded by transcript ACA1_066000A; ARP2/3 complex 34 kDa subunit, putative	join(1970229..1970290,1970441..1970682,1970765..1971115,1971229..1971455)	Acanthamoeba castellanii str. Neff	14918215
ACA1_066010	CDS	ACA1_066010	NW_004457442.1	1971695	1972308	R	encoded by transcript ACA1_066010A; nuclear transport factor 2, putative	complement(join(1971695..1971811,1971911..1971994,1972084..1972155,1972219..1972308))	Acanthamoeba castellanii str. Neff	14918216
ACA1_066020	CDS	ACA1_066020	NW_004457442.1	1972770	1974955	D	encoded by transcript ACA1_066020A; CBS domain containing protein	join(1972770..1973039,1973072..1973175,1973259..1973386,1973482..1973564,1973641..1973713,1973785..1973843,1973945..1974091,1974180..1974254,1974353..1974442,1974530..1974955)	Acanthamoeba castellanii str. Neff	14918217
ACA1_066030	CDS	ACA1_066030	NW_004457442.1	1975071	1978977	R	encoded by transcript ACA1_066030A; uncharacterized protein	complement(join(1975071..1975169,1975289..1975360,1975539..1975653,1975760..1975835,1975898..1976030,1976124..1976212,1976296..1976375,1976452..1976591,1976723..1976830,1976934..1977555,1977639..1977717,1977810..1978977))	Acanthamoeba castellanii str. Neff	14918218
ACA1_066040	CDS	ACA1_066040	NW_004457442.1	1979465	1981740	R	encoded by transcript ACA1_066040A; uncharacterized protein	complement(join(1979465..1979612,1979701..1979837,1979912..1980510,1980579..1981740))	Acanthamoeba castellanii str. Neff	14918219
ACA1_066050	CDS	ACA1_066050	NW_004457442.1	1982386	1987251	R	encoded by transcript ACA1_066050A; uncharacterized protein	complement(join(1982386..1982487,1982548..1982679,1982756..1982880,1982962..1983072,1983158..1983244,1983340..1983484,1983581..1983735,1983822..1983958,1984046..1984116,1984205..1984279,1984365..1984472,1984550..1984628,1984707..1984794,1984862..1984968,1985036..1985180,1985251..1985367,1985428..1985841,1986083..1986199,1986263..1986335,1986415..1986566,1986596..1986664,1986727..1986850,1986926..1987032,1987173..1987251))	Acanthamoeba castellanii str. Neff	14918220
ACA1_066060	CDS	ACA1_066060	NW_004457442.1	1988100	1989961	R	encoded by transcript ACA1_066060A; acetylCoA acyltransferase, putative	complement(join(1988100..1988172,1988265..1988727,1988813..1988996,1989093..1989230,1989294..1989419,1989556..1989724,1989822..1989961))	Acanthamoeba castellanii str. Neff	14918221
ACA1_066070	CDS	ACA1_066070	NW_004457442.1	1990336	1991817	R	encoded by transcript ACA1_066070A; zinc finger protein	complement(1990336..1991817)	Acanthamoeba castellanii str. Neff	14918092
ACA1_066080	CDS	ACA1_066080	NW_004457442.1	1992413	1993870	R	encoded by transcript ACA1_066080A; zinc finger protein	complement(1992413..1993870)	Acanthamoeba castellanii str. Neff	14918093
ACA1_066090	CDS	ACA1_066090	NW_004457442.1	1994618	1995178	D	encoded by transcript ACA1_066090A; uncharacterized protein	1994618..1995178	Acanthamoeba castellanii str. Neff	14918094
ACA1_066100	CDS	ACA1_066100	NW_004457442.1	1995270	1997840	R	encoded by transcript ACA1_066100A; Arf GTPase activating protein	complement(join(1995270..1996153,1996247..1996336,1996417..1996693,1996769..1996906,1997005..1997133,1997235..1997292,1997574..1997616,1997729..>1997840))	Acanthamoeba castellanii str. Neff	14918095
ACA1_066110	CDS	ACA1_066110	NW_004457442.1	1998144	1998876	D	encoded by transcript ACA1_066110A; uncharacterized protein	join(1998144..1998301,1998403..1998575,1998668..1998876)	Acanthamoeba castellanii str. Neff	14918096
ACA1_066120	CDS	ACA1_066120	NW_004457442.1	1999091	2002381	R	encoded by transcript ACA1_066120A; proline-tRNA ligase	complement(join(1999091..1999581,1999749..1999875,1999961..2000075,2000203..2000354,2000487..2000684,2000829..2001025,2001150..2001267,2001398..2001493,2001623..2002042,2002214..2002381))	Acanthamoeba castellanii str. Neff	14918097
ACA1_066130	CDS	ACA1_066130	NW_004457442.1	2002759	2003139	D	encoded by transcript ACA1_066130A; profilin II, putative	2002759..2003139	Acanthamoeba castellanii str. Neff	14918098
ACA1_066140	CDS	ACA1_066140	NW_004457442.1	2003519	2004399	R	encoded by transcript ACA1_066140A; clathrin coat assembly protein, putative	complement(join(2003519..2003680,2003892..2004164,2004331..2004399))	Acanthamoeba castellanii str. Neff	14918099
ACA1_066150	CDS	ACA1_066150	NW_004457442.1	2004798	2015975	D	encoded by transcript ACA1_066150A; myosin head (motor domain) domain containing protein	join(2004798..2004923,2005023..2005112,2005187..2005281,2005405..2005573,2005683..2005749,2005864..2005962,2006052..2006155,2006258..2006359,2006452..2006515,2006641..2006759,2006866..2006943,2007043..2007204,2007298..2007432,2007544..2007690,2007781..2007945,2008102..2008203,2008289..2008374,2008467..2008614,2008710..2008777,2008866..2008995,2009085..2009174,2009253..2009341,2009405..2009601,2009686..2009777,2009891..2010030,2010109..2010253,2010356..2010567,2010668..2010779,2010891..2011025,2011113..2011191,2011285..2011404,2011485..2011633,2011717..2011841,2011922..2012189,2012261..2012380,2012449..2012535,2012643..2012765,2012866..2012974,2013046..2013202,2013279..2013417,2013507..2013623,2013715..2013827,2013928..2014058,2014193..2014400,2014513..2014675,2014786..2014911,2014983..2015092,2015185..2015323,2015412..2015549,2015698..2015817,2015913..2015975)	Acanthamoeba castellanii str. Neff	14918100
ACA1_066160	CDS	ACA1_066160	NW_004457442.1	2017085	2018058	R	encoded by transcript ACA1_066160A; uncharacterized protein	complement(join(<2017085..2017136,2017190..2017376,2017448..2017534,2017601..2017938,2018004..>2018058))	Acanthamoeba castellanii str. Neff	14918101
ACA1_066170	CDS	ACA1_066170	NW_004457442.1	2018369	2021602	R	encoded by transcript ACA1_066170A; communication mutant protein f, putative	complement(2018369..2021602)	Acanthamoeba castellanii str. Neff	14918102
ACA1_066180	CDS	ACA1_066180	NW_004457442.1	2021934	2022756	D	encoded by transcript ACA1_066180A; uncharacterized protein	join(2021934..2022137,2022249..2022354,2022485..2022756)	Acanthamoeba castellanii str. Neff	14918103
ACA1_066200	CDS	ACA1_066200	NW_004457442.1	2023750	2023971	R	encoded by transcript ACA1_066200A; ribonucleotide reductase	complement(2023750..2023971)	Acanthamoeba castellanii str. Neff	14918105
ACA1_066210	CDS	ACA1_066210	NW_004457442.1	2023998	2024575	D	encoded by transcript ACA1_066210A; ribonucleosidediphosphate reductase, beta subunit	join(2023998..2024274,2024337..2024575)	Acanthamoeba castellanii str. Neff	14918106
ACA1_066220	CDS	ACA1_066220	NW_004457442.1	2024982	2026111	R	encoded by transcript ACA1_066220A; uncharacterized protein	complement(join(2024982..2025367,2025400..2026111))	Acanthamoeba castellanii str. Neff	14918107
ACA1_066230	CDS	ACA1_066230	NW_004457442.1	2027068	2027676	R	encoded by transcript ACA1_066230A; uncharacterized protein	complement(2027068..2027676)	Acanthamoeba castellanii str. Neff	14918108
ACA1_066240	CDS	ACA1_066240	NW_004457442.1	2027914	2028692	R	encoded by transcript ACA1_066240A; uncharacterized protein	complement(join(2027914..2028453,2028471..2028692))	Acanthamoeba castellanii str. Neff	14918109
ACA1_066250	CDS	ACA1_066250	NW_004457442.1	2028754	2030273	R	encoded by transcript ACA1_066250A; Rho termination factor domain containing protein	complement(join(2028754..2028849,2028937..2029860,2029890..2030273))	Acanthamoeba castellanii str. Neff	14918110
ACA1_066260	CDS	ACA1_066260	NW_004457442.1	2030304	2030684	R	encoded by transcript ACA1_066260A; uncharacterized protein	complement(2030304..2030684)	Acanthamoeba castellanii str. Neff	14918111
ACA1_066270	CDS	ACA1_066270	NW_004457442.1	2030955	2031907	R	encoded by transcript ACA1_066270A; uncharacterized protein	complement(join(2030955..2031285,2031360..2031907))	Acanthamoeba castellanii str. Neff	14918112
ACA1_066280	CDS	ACA1_066280	NW_004457442.1	2031949	2033097	R	encoded by transcript ACA1_066280A; uncharacterized protein	complement(2031949..2033097)	Acanthamoeba castellanii str. Neff	14918113
ACA1_066290	CDS	ACA1_066290	NW_004457442.1	2033419	2034555	D	encoded by transcript ACA1_066290A; papain family cysteine protease subfamily protein	join(2033419..2033845,2033921..2034555)	Acanthamoeba castellanii str. Neff	14918114
ACA1_066300	CDS	ACA1_066300	NW_004457442.1	2034677	2035183	R	encoded by transcript ACA1_066300A; transcription factor SII (TFIIS) domain containing protein	complement(2034677..2035183)	Acanthamoeba castellanii str. Neff	14918115
ACA1_066310	CDS	ACA1_066310	NW_004457442.1	2035892	2036325	R	encoded by transcript ACA1_066310A; uncharacterized protein	complement(join(2035892..2035984,2036176..2036325))	Acanthamoeba castellanii str. Neff	14918116
ACA1_132010	CDS	ACA1_132010	NW_004457441.1	34	462	R	encoded by transcript ACA1_132010A; uncharacterized protein	complement(<34..462)	Acanthamoeba castellanii str. Neff	14917765
ACA1_132120	CDS	ACA1_132120	NW_004457441.1	6116	6807	D	encoded by transcript ACA1_132120A; uncharacterized protein	join(6116..6338,6537..6646,6658..6807)	Acanthamoeba castellanii str. Neff	14917773
ACA1_132130	CDS	ACA1_132130	NW_004457441.1	6861	7408	R	encoded by transcript ACA1_132130A; uncharacterized protein	complement(join(6861..6983,7070..7408))	Acanthamoeba castellanii str. Neff	14917774
ACA1_132140	CDS	ACA1_132140	NW_004457441.1	8121	10839	R	encoded by transcript ACA1_132140A; uncharacterized protein	complement(join(8121..8439,8605..8743,8900..9035,9157..9318,9441..9561,9666..9703,9769..9859,10037..10130,10262..10307,10505..10607,10679..10839))	Acanthamoeba castellanii str. Neff	14917750
ACA1_132350	CDS	ACA1_132350	NW_004457441.1	13692	15871	R	encoded by transcript ACA1_132350A; leucine zipperef-hand containing transmembrane protein 1, putative	complement(join(<13692..13803,13873..13972,14113..14244,14315..14529,14632..14742,14863..15009,15122..15399,15564..15608,15730..15871))	Acanthamoeba castellanii str. Neff	14917751
ACA1_132360	CDS	ACA1_132360	NW_004457441.1	17320	20503	R	encoded by transcript ACA1_132360A; glutamine-tRNA ligase	complement(join(17320..17664,17748..17906,18024..18157,18234..18422,18538..18815,18908..19116,19201..19359,19434..19749,19813..20039,20134..20230,20349..20503))	Acanthamoeba castellanii str. Neff	14917752
ACA1_132370	CDS	ACA1_132370	NW_004457441.1	20795	21031	R	encoded by transcript ACA1_132370A; uncharacterized protein	complement(join(20795..20855,20967..21031))	Acanthamoeba castellanii str. Neff	14917766
ACA1_132380	CDS	ACA1_132380	NW_004457441.1	21368	21777	D	encoded by transcript ACA1_132380A; uncharacterized protein	join(21368..21470,21695..21777)	Acanthamoeba castellanii str. Neff	14917767
ACA1_132390	CDS	ACA1_132390	NW_004457441.1	21905	22361	D	encoded by transcript ACA1_132390A; iodothyronine deiodinase	join(21905..21986,22210..22361)	Acanthamoeba castellanii str. Neff	14917768
ACA1_132400	CDS	ACA1_132400	NW_004457441.1	22686	23640	D	encoded by transcript ACA1_132400A; pirin domain containing protein	join(22686..22859,22957..23640)	Acanthamoeba castellanii str. Neff	14917769
ACA1_132410	CDS	ACA1_132410	NW_004457441.1	23871	25884	R	encoded by transcript ACA1_132410A; uncharacterized protein	complement(join(23871..23909,23926..23980,24162..24434,24549..24745,24842..24918,25031..25101,25149..25193,25280..25347,25442..25606,25732..25884))	Acanthamoeba castellanii str. Neff	14917770
ACA1_132420	CDS	ACA1_132420	NW_004457441.1	26735	28059	R	encoded by transcript ACA1_132420A; TolA protein	complement(join(26735..27397,27557..27713,27809..28059))	Acanthamoeba castellanii str. Neff	14917771
ACA1_132430	CDS	ACA1_132430	NW_004457441.1	28282	30306	R	encoded by transcript ACA1_132430A; uncharacterized protein	complement(join(28282..28325,28390..28516,28680..28794,28927..29109,29228..29612,29626..29750,29857..29981,30077..30161,30269..30306))	Acanthamoeba castellanii str. Neff	14917772
ACA1_132540	CDS	ACA1_132540	NW_004457441.1	31196	31363	D	encoded by transcript ACA1_132540A; uncharacterized protein	<31196..>31363	Acanthamoeba castellanii str. Neff	14917753
ACA1_132550	CDS	ACA1_132550	NW_004457441.1	31387	32544	R	encoded by transcript ACA1_132550A; Pyruvateflavodoxin oxidoreductase	complement(join(31387..31875,31893..32024,32089..32275,32303..32415,32455..>32544))	Acanthamoeba castellanii str. Neff	14917754
ACA1_132560	CDS	ACA1_132560	NW_004457441.1	33643	35092	R	encoded by transcript ACA1_132560A; pyruvate ferredoxin oxidoreductase	complement(join(33643..33835,33952..34659,34686..34924,34964..35092))	Acanthamoeba castellanii str. Neff	14917755
ACA1_132570	CDS	ACA1_132570	NW_004457441.1	35346	36943	R	encoded by transcript ACA1_132570A; uncharacterized protein	complement(join(35346..35352,35530..35752,35846..35956,36054..36463,36591..36691,36785..36943))	Acanthamoeba castellanii str. Neff	14917756
ACA1_132580	CDS	ACA1_132580	NW_004457441.1	37313	38751	D	encoded by transcript ACA1_132580A; uncharacterized protein	join(37313..37689,37781..37868,37975..38751)	Acanthamoeba castellanii str. Neff	14917757
ACA1_132590	CDS	ACA1_132590	NW_004457441.1	39477	40107	D	encoded by transcript ACA1_132590A; uncharacterized protein	join(39477..39838,39921..40107)	Acanthamoeba castellanii str. Neff	14917758
ACA1_132600	CDS	ACA1_132600	NW_004457441.1	40788	44000	D	encoded by transcript ACA1_132600A; ankyrin repeat-containing protein	join(40788..41048,41139..41236,41371..41774,41933..42043,42137..42366,42557..42736,42942..43306,43396..43660,43839..44000)	Acanthamoeba castellanii str. Neff	14917759
ACA1_132610	CDS	ACA1_132610	NW_004457441.1	44205	45478	D	encoded by transcript ACA1_132610A; protein tolA, putative	join(44205..44455,44549..44705,44858..45478)	Acanthamoeba castellanii str. Neff	14917760
ACA1_132620	CDS	ACA1_132620	NW_004457441.1	45551	47239	R	encoded by transcript ACA1_132620A; zinc finger, C3HC4 type (RING finger) domain containing protein	complement(join(45551..45599,45693..45759,45868..46015,46111..46169,46262..46448,46571..46737,46861..47239))	Acanthamoeba castellanii str. Neff	14917761
ACA1_132630	CDS	ACA1_132630	NW_004457441.1	47595	49262	D	encoded by transcript ACA1_132630A; mitochondrial adp/atp carrier proteins (iss), putative	join(47595..47816,48023..48105,48256..48343,48443..48544,48569..48691,48788..48968,49066..49262)	Acanthamoeba castellanii str. Neff	14917762
ACA1_132640	CDS	ACA1_132640	NW_004457441.1	49491	55213	R	encoded by transcript ACA1_132640A; uncharacterized protein	complement(join(49491..50261,50276..50662,50800..50922,51071..51147,51268..51400,51482..51555,51667..51800,51904..52059,52147..52297,52439..52544,53052..53863,54091..55213))	Acanthamoeba castellanii str. Neff	14917763
ACA1_132660	CDS	ACA1_132660	NW_004457441.1	60047	63377	D	encoded by transcript ACA1_132660A; glutaminase	join(60047..60115,60410..60490,60613..60798,60884..60949,61031..61149,61271..61466,61536..61679,61750..61907,62014..62090,62182..62258,62350..62475,62729..62835,62943..63123,63246..63377)	Acanthamoeba castellanii str. Neff	14917735
ACA1_132670	CDS	ACA1_132670	NW_004457441.1	63551	64722	R	encoded by transcript ACA1_132670A; uncharacterized protein	complement(join(63551..63672,63775..63874,63952..64017,64118..64192,64270..64350,64486..64530,64630..64722))	Acanthamoeba castellanii str. Neff	14917736
ACA1_132680	CDS	ACA1_132680	NW_004457441.1	64848	65523	R	encoded by transcript ACA1_132680A; uncharacterized protein	complement(join(64848..64937,65074..65523))	Acanthamoeba castellanii str. Neff	14917737
ACA1_132800	CDS	ACA1_132800	NW_004457441.1	72811	76993	R	encoded by transcript ACA1_132800A; formin domain containing protein	complement(join(72811..72833,72893..72970,73074..73361,73428..73509,73601..73650,73741..73812,73918..73978,74078..74239,74326..74484,74603..74708,74788..74945,75036..75116,75192..75299,75421..75515,75597..75680,75751..75922,76010..76078,76141..76215,76503..76540,76619..76662,76742..76804,76872..76993))	Acanthamoeba castellanii str. Neff	14917739
ACA1_132810	CDS	ACA1_132810	NW_004457441.1	78433	78680	R	encoded by transcript ACA1_132810A; uncharacterized protein	complement(join(78433..78491,78539..78680))	Acanthamoeba castellanii str. Neff	14917740
ACA1_132830	CDS	ACA1_132830	NW_004457441.1	81625	82965	R	encoded by transcript ACA1_132830A; translation elongation factor EF1, subunit alpha, putative	complement(81625..82965)	Acanthamoeba castellanii str. Neff	14917742
ACA1_132840	CDS	ACA1_132840	NW_004457441.1	83355	85361	D	encoded by transcript ACA1_132840A; Nuf2 subfamily protein	join(83355..83623,83691..83850,83929..84030,84115..84240,84323..84415,84485..84557,84631..84716,84789..84887,84960..85154,85242..85361)	Acanthamoeba castellanii str. Neff	14917743
ACA1_132850	CDS	ACA1_132850	NW_004457441.1	85890	87643	D	encoded by transcript ACA1_132850A; Putative tyrosine phosphatase family protein	join(85890..85957,86049..86120,86240..86323,86428..86503,86630..86674,86798..86886,86985..87142,87220..87390,87489..87572,87630..87643)	Acanthamoeba castellanii str. Neff	14917744
ACA1_132860	CDS	ACA1_132860	NW_004457441.1	88158	89650	D	encoded by transcript ACA1_132860A; DJ1/PfpI superfamily protein	join(88158..88226,88328..88398,88491..88551,88654..88724,88816..88898,89017..89160,89231..89306,89358..89407,89487..89650)	Acanthamoeba castellanii str. Neff	14917745
ACA1_132870	CDS	ACA1_132870	NW_004457441.1	89825	90920	D	encoded by transcript ACA1_132870A; chromatin modifying protein 1b, putative	join(89825..89831,89933..90030,90108..90181,90262..90403,90469..90514,90604..90776,90876..90920)	Acanthamoeba castellanii str. Neff	14917746
ACA1_132880	CDS	ACA1_132880	NW_004457441.1	91251	92227	D	encoded by transcript ACA1_132880A; peptidase family m1 domain containing protein	join(91251..91389,91482..91577,91650..91809,91910..92027,92099..92227)	Acanthamoeba castellanii str. Neff	14917747
ACA1_132890	CDS	ACA1_132890	NW_004457441.1	92326	95411	D	encoded by transcript ACA1_132890A; APM1 (AMINOPEPTIDASE M1), putative	join(92326..92419,92492..92576,92672..92769,92850..92902,92966..93044,93140..93273,93344..93433,93528..93644,93753..93810,93883..94025,94107..94211,94309..94440,94468..94623,94730..94801,94886..95099,95162..95242,95326..95411)	Acanthamoeba castellanii str. Neff	14917748
ACA1_132900	CDS	ACA1_132900	NW_004457441.1	95933	98856	D	encoded by transcript ACA1_132900A; CBS domain containing protein	join(95933..96180,96806..97105,98090..98242,98321..98385,98451..98597,98699..>98856)	Acanthamoeba castellanii str. Neff	14917749
ACA1_133010	CDS	ACA1_133010	NW_004457441.1	101380	103987	D	encoded by transcript ACA1_133010A; cellulase (glycosyl hydrolase family 5) subfamily protein	join(101380..101453,101504..101557,101624..101705,101778..102275,102341..102598,102669..102821,102839..102952,103110..103193,103627..103833,103859..>103987)	Acanthamoeba castellanii str. Neff	14917775
ACA1_020460	CDS	ACA1_020460	NW_004457440.1	5697	7027	R	encoded by transcript ACA1_020460A; Rho termination factor domain containing protein	complement(join(5697..5756,5771..7027))	Acanthamoeba castellanii str. Neff	14917731
ACA1_020470	CDS	ACA1_020470	NW_004457440.1	7058	7438	R	encoded by transcript ACA1_020470A; uncharacterized protein	complement(7058..7438)	Acanthamoeba castellanii str. Neff	14917732
ACA1_020480	CDS	ACA1_020480	NW_004457440.1	7753	8928	R	encoded by transcript ACA1_020480A; uncharacterized protein	complement(join(7753..8458,8480..8928))	Acanthamoeba castellanii str. Neff	14917733
ACA1_020490	CDS	ACA1_020490	NW_004457440.1	8970	9745	R	encoded by transcript ACA1_020490A; uncharacterized protein	complement(join(8970..9050,9151..9345,9384..9641,9677..9745))	Acanthamoeba castellanii str. Neff	14917734
ACA1_020500	CDS	ACA1_020500	NW_004457440.1	11666	13911	D	encoded by transcript ACA1_020500A; Serine/threonine protein kinase	join(11666..12125,12500..12685,12731..12834,12934..13299,13393..13911)	Acanthamoeba castellanii str. Neff	14917727
ACA1_020510	CDS	ACA1_020510	NW_004457440.1	15079	15603	D	encoded by transcript ACA1_020510A; uncharacterized protein	15079..15603	Acanthamoeba castellanii str. Neff	14917728
ACA1_020520	CDS	ACA1_020520	NW_004457440.1	16468	17411	D	encoded by transcript ACA1_020520A; uncharacterized protein	join(16468..17242,17377..17411)	Acanthamoeba castellanii str. Neff	14917729
ACA1_020530	CDS	ACA1_020530	NW_004457440.1	20010	20732	D	encoded by transcript ACA1_020530A; uncharacterized protein	20010..20732	Acanthamoeba castellanii str. Neff	14917730
ACA1_002430	CDS	ACA1_002430	NW_004457439.1	85	1711	R	encoded by transcript ACA1_002430A; Miro family protein	complement(join(<85..156,244..311,425..447,514..622,705..780,918..973,1064..1142,1229..1303,1390..1406,1552..1711))	Acanthamoeba castellanii str. Neff	14917724
ACA1_002440	CDS	ACA1_002440	NW_004457439.1	2197	2952	D	encoded by transcript ACA1_002440A; Fbox domain containing protein	join(2197..2336,2414..2483,2545..2670,2737..2952)	Acanthamoeba castellanii str. Neff	14917725
ACA1_002450	CDS	ACA1_002450	NW_004457439.1	3032	3921	D	encoded by transcript ACA1_002450A; uncharacterized protein	join(<3032..3054,3126..3186,3247..3351,3434..3577,3660..3780,3845..3921)	Acanthamoeba castellanii str. Neff	14917726
ACA1_002460	CDS	ACA1_002460	NW_004457439.1	3998	4873	D	encoded by transcript ACA1_002460A; Fbox domain containing protein	join(3998..4128,4206..4290,4527..4624,4663..4873)	Acanthamoeba castellanii str. Neff	14917718
ACA1_002470	CDS	ACA1_002470	NW_004457439.1	5213	5698	D	encoded by transcript ACA1_002470A; uncharacterized protein	join(5213..5281,5413..5530,5616..5698)	Acanthamoeba castellanii str. Neff	14917719
ACA1_002480	CDS	ACA1_002480	NW_004457439.1	5820	6587	R	encoded by transcript ACA1_002480A; uncharacterized protein	complement(5820..6587)	Acanthamoeba castellanii str. Neff	14917720
ACA1_002490	CDS	ACA1_002490	NW_004457439.1	7127	8249	R	encoded by transcript ACA1_002490A; threonine/alanine tRNA ligase subfamily protein	complement(join(7127..7378,7452..7570,7675..7734,7809..8012,8084..8249))	Acanthamoeba castellanii str. Neff	14917721
ACA1_002500	CDS	ACA1_002500	NW_004457439.1	8550	10929	D	encoded by transcript ACA1_002500A; uncharacterized protein	join(8550..8773,8852..8966,9043..9176,9297..9421,9544..9698,9805..9946,10020..10208,10284..10413,10493..10553,10613..10752,10842..10929)	Acanthamoeba castellanii str. Neff	14917722
ACA1_002510	CDS	ACA1_002510	NW_004457439.1	11735	12781	D	encoded by transcript ACA1_002510A; uncharacterized protein	11735..12781	Acanthamoeba castellanii str. Neff	14917723
ACA1_304160	CDS	ACA1_304160	NW_004457438.1	163	672	D	encoded by transcript ACA1_304160A; uncharacterized protein	163..672	Acanthamoeba castellanii str. Neff	14917717
ACA1_304270	CDS	ACA1_304270	NW_004457438.1	4225	11419	D	encoded by transcript ACA1_304270A; Filamin repeat domain containing protein	join(4225..4436,4589..4695,4825..4920,5151..5335,5501..5629,5724..5978,6085..6224,6337..6470,6580..6683,6764..7337,7436..7561,7691..8005,8101..8218,8318..8474,8615..8828,8914..9018,9119..9232,9347..9435,9541..9703,9801..9946,10043..10351,10454..10719,10801..11419)	Acanthamoeba castellanii str. Neff	14917715
ACA1_304280	CDS	ACA1_304280	NW_004457438.1	12463	13022	R	encoded by transcript ACA1_304280A; uncharacterized protein	complement(join(12463..12948,12981..13022))	Acanthamoeba castellanii str. Neff	14917716
ACA1_304290	CDS	ACA1_304290	NW_004457438.1	15033	16117	D	encoded by transcript ACA1_304290A; uncharacterized protein	join(15033..15469,15724..15931,15992..16018,16049..16117)	Acanthamoeba castellanii str. Neff	14917701
ACA1_304300	CDS	ACA1_304300	NW_004457438.1	16348	17455	R	encoded by transcript ACA1_304300A; uncharacterized protein	complement(join(16348..16515,16568..16702,16724..17455))	Acanthamoeba castellanii str. Neff	14917702
ACA1_304310	CDS	ACA1_304310	NW_004457438.1	18187	19218	D	encoded by transcript ACA1_304310A; cysteine protease	join(18187..18607,18689..19218)	Acanthamoeba castellanii str. Neff	14917703
ACA1_304320	CDS	ACA1_304320	NW_004457438.1	19785	20296	R	encoded by transcript ACA1_304320A; uncharacterized protein	complement(join(19785..20101,20128..20296))	Acanthamoeba castellanii str. Neff	14917704
ACA1_304330	CDS	ACA1_304330	NW_004457438.1	20315	21159	R	encoded by transcript ACA1_304330A; uncharacterized protein	complement(join(20315..20324,20348..21159))	Acanthamoeba castellanii str. Neff	14917705
ACA1_304340	CDS	ACA1_304340	NW_004457438.1	21228	22395	R	encoded by transcript ACA1_304340A; uncharacterized protein	complement(join(21228..21854,21905..22219,22240..22395))	Acanthamoeba castellanii str. Neff	14917706
ACA1_304350	CDS	ACA1_304350	NW_004457438.1	22886	23479	R	encoded by transcript ACA1_304350A; uncharacterized protein	complement(22886..23479)	Acanthamoeba castellanii str. Neff	14917707
ACA1_304360	CDS	ACA1_304360	NW_004457438.1	23612	25518	D	encoded by transcript ACA1_304360A; uncharacterized protein	join(23612..23752,23841..23910,23992..24041,24135..24320,24433..24510,24604..24682,24785..24976,25115..25216,25361..25518)	Acanthamoeba castellanii str. Neff	14917708
ACA1_304370	CDS	ACA1_304370	NW_004457438.1	25641	26240	R	encoded by transcript ACA1_304370A; Ras family protein	complement(25641..26240)	Acanthamoeba castellanii str. Neff	14917709
ACA1_304380	CDS	ACA1_304380	NW_004457438.1	26485	27615	R	encoded by transcript ACA1_304380A; acetyltransferase, GNAT superfamily protein	complement(join(26485..26657,26751..26852,26938..26975,27062..27179,27271..27356,27440..27615))	Acanthamoeba castellanii str. Neff	14917710
ACA1_304390	CDS	ACA1_304390	NW_004457438.1	28475	30575	D	encoded by transcript ACA1_304390A; Ras family protein	join(28475..28914,29973..30039,30211..30392,30464..30575)	Acanthamoeba castellanii str. Neff	14917711
ACA1_304500	CDS	ACA1_304500	NW_004457438.1	30684	31193	R	encoded by transcript ACA1_304500A; CMP/dCMP deaminase, zincbinding, putative	complement(30684..31193)	Acanthamoeba castellanii str. Neff	14917712
ACA1_304510	CDS	ACA1_304510	NW_004457438.1	32042	34363	D	encoded by transcript ACA1_304510A; carbohydrate binding domain cbm49 protein	join(32042..32516,32675..32994,33303..33392,33470..33593,33745..33878,33980..34111,34163..34220,34344..34363)	Acanthamoeba castellanii str. Neff	14917713
ACA1_304520	CDS	ACA1_304520	NW_004457438.1	35252	36005	R	encoded by transcript ACA1_304520A; uncharacterized protein	complement(35252..>36005)	Acanthamoeba castellanii str. Neff	14917714
ACA1_127860	CDS	ACA1_127860	NW_004457437.1	6520	7394	R	encoded by transcript ACA1_127860A; uncharacterized protein	complement(join(6520..6763,6799..6986,7031..7141,7155..7394))	Acanthamoeba castellanii str. Neff	14917700
ACA1_127870	CDS	ACA1_127870	NW_004457437.1	7451	8344	R	encoded by transcript ACA1_127870A; Carboxylesterase	complement(join(7451..7879,7936..8085,8146..8237,8320..8344))	Acanthamoeba castellanii str. Neff	14917687
ACA1_127880	CDS	ACA1_127880	NW_004457437.1	8389	9413	D	encoded by transcript ACA1_127880A; ATPase	join(8389..8424,8484..8562,8674..8703,8769..8822,8937..9029,9133..9203,9291..9413)	Acanthamoeba castellanii str. Neff	14917688
ACA1_127890	CDS	ACA1_127890	NW_004457437.1	9513	11112	R	encoded by transcript ACA1_127890A; spermidine synthase	complement(join(9513..10016,10237..10329,10617..10757,10862..10920,11058..11112))	Acanthamoeba castellanii str. Neff	14917689
ACA1_127900	CDS	ACA1_127900	NW_004457437.1	11453	12032	D	encoded by transcript ACA1_127900A; uncharacterized protein	join(11453..11551,11721..12032)	Acanthamoeba castellanii str. Neff	14917678
ACA1_127910	CDS	ACA1_127910	NW_004457437.1	13690	15012	D	encoded by transcript ACA1_127910A; acetyltransferase, GNAT superfamily protein	join(13690..13767,14082..14334,14443..14727,14798..15012)	Acanthamoeba castellanii str. Neff	14917679
ACA1_128020	CDS	ACA1_128020	NW_004457437.1	15110	18453	D	encoded by transcript ACA1_128020A; uncharacterized protein	join(15110..15146,15363..15689,15788..15886,15969..16044,16181..16296,16369..16470,16552..16638,16791..16952,17030..17088,17180..17347,17521..17574,17703..17810,17978..18126,18167..18358,18429..18453)	Acanthamoeba castellanii str. Neff	14917680
ACA1_128040	CDS	ACA1_128040	NW_004457437.1	25147	31620	D	encoded by transcript ACA1_128040A; MutS domain V domain containing protein	join(25147..26091,26196..26411,26511..26606,26742..26871,26965..27077,27157..27334,27448..27551,27683..27889,28021..28130,28207..28270,28338..28450,28572..28776,28901..29002,29098..29162,29305..29421,29546..29687,29778..29927,30035..30150,30360..30476,30579..30669,30772..30863,31093..31150,31306..31620)	Acanthamoeba castellanii str. Neff	14917682
ACA1_128050	CDS	ACA1_128050	NW_004457437.1	32112	32904	D	encoded by transcript ACA1_128050A; uncharacterized protein	join(32112..32185,32418..32484,32530..32904)	Acanthamoeba castellanii str. Neff	14917683
ACA1_128170	CDS	ACA1_128170	NW_004457437.1	36895	43383	D	encoded by transcript ACA1_128170A; DNAdirected RNA polymerase subunit A	join(36895..36980,37179..37311,37434..37527,37662..37690,37929..38051,38147..38268,38409..38605,38719..38986,39128..39342,39460..39584,39735..39885,39994..40291,40378..40500,40623..40774,40860..41030,41152..41248,41363..41513,41603..41862,41954..42253,42404..42545,42700..42822,42953..43087,43186..43383)	Acanthamoeba castellanii str. Neff	14917685
ACA1_128180	CDS	ACA1_128180	NW_004457437.1	43434	44837	R	encoded by transcript ACA1_128180A; methyltransferase	complement(join(43434..43511,43639..43787,43909..44024,44111..44235,44329..44409,44433..44502,44620..44837))	Acanthamoeba castellanii str. Neff	14917686
ACA1_128190	CDS	ACA1_128190	NW_004457437.1	45025	45427	D	encoded by transcript ACA1_128190A; uncharacterized protein	join(45025..45159,45257..45427)	Acanthamoeba castellanii str. Neff	14917666
ACA1_128200	CDS	ACA1_128200	NW_004457437.1	45588	47067	R	encoded by transcript ACA1_128200A; CBS domain containing protein	complement(join(45588..45706,45753..45813,45910..46067,46152..46269,46383..46549,46642..46717,46840..47067))	Acanthamoeba castellanii str. Neff	14917667
ACA1_128210	CDS	ACA1_128210	NW_004457437.1	47719	49446	R	encoded by transcript ACA1_128210A; uncharacterized protein	complement(join(47719..48390,48431..48642,48987..49116,49237..49446))	Acanthamoeba castellanii str. Neff	14917668
ACA1_128220	CDS	ACA1_128220	NW_004457437.1	51197	51619	D	encoded by transcript ACA1_128220A; uncharacterized protein	join(51197..51243,51424..51619)	Acanthamoeba castellanii str. Neff	14917669
ACA1_128230	CDS	ACA1_128230	NW_004457437.1	52313	52871	R	encoded by transcript ACA1_128230A; uncharacterized protein	complement(join(52313..52548,52620..52788,52845..52871))	Acanthamoeba castellanii str. Neff	14917670
ACA1_128240	CDS	ACA1_128240	NW_004457437.1	53934	57468	D	encoded by transcript ACA1_128240A; ferrochelatase	join(53934..53941,54276..54362,54725..54854,55424..55729,55835..55990,56272..56388,56491..56652,56771..56893,56991..57125,57274..57468)	Acanthamoeba castellanii str. Neff	14917671
ACA1_128450	CDS	ACA1_128450	NW_004457437.1	59032	60176	R	encoded by transcript ACA1_128450A; adenine nucleotide translocator, putative	complement(join(59032..59646,59750..59944,60045..60176))	Acanthamoeba castellanii str. Neff	14917672
ACA1_128470	CDS	ACA1_128470	NW_004457437.1	63863	65750	D	encoded by transcript ACA1_128470A; uncharacterized protein	join(63863..63926,64012..64054,64145..64231,64407..64545,64566..64696,64833..64926,65053..65296,65434..65588,65679..65750)	Acanthamoeba castellanii str. Neff	14917674
ACA1_128480	CDS	ACA1_128480	NW_004457437.1	66216	68634	R	encoded by transcript ACA1_128480A; SPRY domain containing protein	complement(join(66216..66262,66368..66442,66556..66656,66785..67005,67123..67397,67497..67968,68149..68634))	Acanthamoeba castellanii str. Neff	14917675
ACA1_128490	CDS	ACA1_128490	NW_004457437.1	68849	72570	R	encoded by transcript ACA1_128490A; proteasome 26S subunit, nonATPase, 1, putative	complement(join(68849..69793,69927..70450,70535..70721,70821..71045,71148..71267,71368..71595,71682..72088,72181..72350,72428..72570))	Acanthamoeba castellanii str. Neff	14917676
ACA1_128500	CDS	ACA1_128500	NW_004457437.1	72947	73936	R	encoded by transcript ACA1_128500A; ubiquitinconjugating enzyme E2-17 kDa, putative	complement(join(72947..73108,73228..73280,73367..73459,73585..73626,73719..73761,73868..73936))	Acanthamoeba castellanii str. Neff	14917677
ACA1_128510	CDS	ACA1_128510	NW_004457437.1	74241	76193	D	encoded by transcript ACA1_128510A; chaperonin GroL, putative	join(74241..74426,74518..74949,75084..76193)	Acanthamoeba castellanii str. Neff	14917655
ACA1_128520	CDS	ACA1_128520	NW_004457437.1	76693	78248	R	encoded by transcript ACA1_128520A; uncharacterized protein	complement(join(76693..76778,76844..77091,77106..77306,77587..77703,77789..77873,78017..78248))	Acanthamoeba castellanii str. Neff	14917656
ACA1_128530	CDS	ACA1_128530	NW_004457437.1	79133	80055	D	encoded by transcript ACA1_128530A; fatty acid elongase	join(79133..79438,79552..80055)	Acanthamoeba castellanii str. Neff	14917657
ACA1_128540	CDS	ACA1_128540	NW_004457437.1	80356	81074	R	encoded by transcript ACA1_128540A; uncharacterized protein	complement(join(80356..80470,80558..80747,80829..80913,80940..81074))	Acanthamoeba castellanii str. Neff	14917658
ACA1_128550	CDS	ACA1_128550	NW_004457437.1	81835	82332	D	encoded by transcript ACA1_128550A; uncharacterized protein	join(81835..82024,82091..82332)	Acanthamoeba castellanii str. Neff	14917659
ACA1_128560	CDS	ACA1_128560	NW_004457437.1	86548	89405	R	encoded by transcript ACA1_128560A; acetylCoA C-acetyltransferase subfamily protein	complement(join(86548..86684,86777..86954,87029..87182,87277..87346,87476..87560,87679..87766,87887..87943,88013..88225,88327..88517,88600..88753,88838..88985,89141..89405))	Acanthamoeba castellanii str. Neff	14917660
ACA1_128570	CDS	ACA1_128570	NW_004457437.1	89499	92227	R	encoded by transcript ACA1_128570A; 3hydroxyacyl-CoA dehydrogenase, NAD binding domain containing protein	complement(join(89499..89706,89811..89974,90063..90310,90433..90603,90673..90733,90824..90925,91042..91143,91216..91324,91405..91555,91613..91755,91808..91891,91979..92058,92138..92227))	Acanthamoeba castellanii str. Neff	14917661
ACA1_128580	CDS	ACA1_128580	NW_004457437.1	92474	95137	D	encoded by transcript ACA1_128580A; RasGEF domain containing protein	join(92474..92565,92737..92942,93025..93122,93185..93265,93413..93776,94179..94209,94377..94461,94522..94651,94777..94894,94999..95137)	Acanthamoeba castellanii str. Neff	14917662
ACA1_128690	CDS	ACA1_128690	NW_004457437.1	97896	98183	R	encoded by transcript ACA1_128690A; uncharacterized protein	complement(97896..98183)	Acanthamoeba castellanii str. Neff	14917663
ACA1_128800	CDS	ACA1_128800	NW_004457437.1	98699	99650	D	encoded by transcript ACA1_128800A; reductase	join(98699..98842,98926..99255,99345..99650)	Acanthamoeba castellanii str. Neff	14917664
ACA1_128810	CDS	ACA1_128810	NW_004457437.1	100114	102005	R	encoded by transcript ACA1_128810A; uncharacterized protein	complement(join(100114..100375,100491..100627,100715..100981,101064..101498,101679..102005))	Acanthamoeba castellanii str. Neff	14917665
ACA1_128820	CDS	ACA1_128820	NW_004457437.1	102291	103766	R	encoded by transcript ACA1_128820A; leucine rich repeat domain containing protein	complement(join(102291..102421,102480..102587,102642..102753,102820..102961,103020..103132,103220..103540,103620..103766))	Acanthamoeba castellanii str. Neff	14917690
ACA1_128830	CDS	ACA1_128830	NW_004457437.1	104191	106101	D	encoded by transcript ACA1_128830A; encystationmediating serine proteinase	join(104191..104254,104348..104440,104520..104655,104793..104895,104961..105058,105134..105293,105381..105537,105605..106101)	Acanthamoeba castellanii str. Neff	14917691
ACA1_128840	CDS	ACA1_128840	NW_004457437.1	107416	108284	D	encoded by transcript ACA1_128840A; cytidine and deoxycytidylate deaminase zincbinding region domain containing protein	join(107416..107550,107667..107728,107795..108026,108093..108167,108249..108284)	Acanthamoeba castellanii str. Neff	14917692
ACA1_128850	CDS	ACA1_128850	NW_004457437.1	108391	112040	R	encoded by transcript ACA1_128850A; glycosyl hydrolase family 10, putative	complement(join(108391..108631,108724..109435,109456..109844,109930..110148,110249..110405,110486..110660,110759..110919,111056..111269,111383..111694,111903..112040))	Acanthamoeba castellanii str. Neff	14917693
ACA1_128870	CDS	ACA1_128870	NW_004457437.1	114183	115101	R	encoded by transcript ACA1_128870A; TPR repeat-containing protein	complement(join(114183..114304,114375..114443,114552..114595,114668..>115101))	Acanthamoeba castellanii str. Neff	14917695
ACA1_128980	CDS	ACA1_128980	NW_004457437.1	115603	115952	R	encoded by transcript ACA1_128980A; uncharacterized protein	complement(join(115603..115722,115863..115952))	Acanthamoeba castellanii str. Neff	14917696
ACA1_128990	CDS	ACA1_128990	NW_004457437.1	117119	119170	R	encoded by transcript ACA1_128990A; Bifunctional microsomal desaturase	complement(join(117119..117428,117486..117708,117816..117918,118018..118179,118281..118453,118590..118725,119018..119170))	Acanthamoeba castellanii str. Neff	14917697
ACA1_129000	CDS	ACA1_129000	NW_004457437.1	119918	120984	R	encoded by transcript ACA1_129000A; Raslike protein rasS, putative	complement(join(119918..120081,120145..120364,120434..120506,120587..120661,120779..120882,120964..120984))	Acanthamoeba castellanii str. Neff	14917698
ACA1_129010	CDS	ACA1_129010	NW_004457437.1	121551	124880	R	encoded by transcript ACA1_129010A; uncharacterized protein	complement(join(121551..121898,124049..124221,124368..124460,124657..124701,124793..124880))	Acanthamoeba castellanii str. Neff	14917699
ACA1_049090	CDS	ACA1_049090	NW_004457436.1	6176	8207	D	encoded by transcript ACA1_049090A; uncharacterized protein	join(<6176..6284,6526..6566,6702..6988,7073..7179,7294..7475,7559..7834,7930..8010,8109..>8207)	Acanthamoeba castellanii str. Neff	14917654
ACA1_049200	CDS	ACA1_049200	NW_004457436.1	12386	12761	R	encoded by transcript ACA1_049200A; Dalanine aminotransferase	complement(join(12386..12494,12625..12761))	Acanthamoeba castellanii str. Neff	14917651
ACA1_049210	CDS	ACA1_049210	NW_004457436.1	15552	16837	R	encoded by transcript ACA1_049210A; phosducin subfamily protein	complement(join(15552..15602,15687..15766,15919..16036,16175..16265,16354..16491,16590..16837))	Acanthamoeba castellanii str. Neff	14917650
ACA1_049320	CDS	ACA1_049320	NW_004457436.1	21113	21783	R	encoded by transcript ACA1_049320A; NADH dehydrogenase, putative	complement(join(21113..21185,21354..21522,21714..21783))	Acanthamoeba castellanii str. Neff	14917652
ACA1_049330	CDS	ACA1_049330	NW_004457436.1	21908	22251	D	encoded by transcript ACA1_049330A; uncharacterized protein	join(21908..22019,22100..>22251)	Acanthamoeba castellanii str. Neff	14917653
ACA1_041740	CDS	ACA1_041740	NW_004457435.1	160	772	D	encoded by transcript ACA1_041740A; uncharacterized protein	join(160..207,289..504,589..663,728..772)	Acanthamoeba castellanii str. Neff	14917560
ACA1_041750	CDS	ACA1_041750	NW_004457435.1	911	1697	D	encoded by transcript ACA1_041750A; uncharacterized protein	join(911..970,1044..1697)	Acanthamoeba castellanii str. Neff	14917625
ACA1_041760	CDS	ACA1_041760	NW_004457435.1	1799	5101	R	encoded by transcript ACA1_041760A; glycosyltransferase domain containing protein	complement(join(1799..1927,2137..2312,2388..2484,2580..2666,2796..2969,3056..3133,3219..3715,3783..3876,3951..4021,4112..4499,4586..5101))	Acanthamoeba castellanii str. Neff	14917626
ACA1_041770	CDS	ACA1_041770	NW_004457435.1	5610	6442	R	encoded by transcript ACA1_041770A; uncharacterized protein	complement(join(5610..5721,5808..5869,6036..6079,6158..6220,6289..6442))	Acanthamoeba castellanii str. Neff	14917627
ACA1_041780	CDS	ACA1_041780	NW_004457435.1	6981	8056	D	encoded by transcript ACA1_041780A; uncharacterized protein	join(6981..7164,7248..7363,7443..7524,7614..7729,7813..7884,7970..8056)	Acanthamoeba castellanii str. Neff	14917596
ACA1_041790	CDS	ACA1_041790	NW_004457435.1	8164	13073	D	encoded by transcript ACA1_041790A; ornithine/lysine/arginine decarboxylase	join(8164..8598,8755..8970,9097..9245,9319..9399,9536..9644,9731..9902,10048..10258,10349..10430,10513..10607,10658..10850,10973..11125,11213..11299,11402..11533,11623..11697,11773..11934,12073..12191,12292..12396,12528..12651,12742..12909,12981..13073)	Acanthamoeba castellanii str. Neff	14917597
ACA1_041900	CDS	ACA1_041900	NW_004457435.1	14286	16501	D	encoded by transcript ACA1_041900A; LNS2 (Lipin/Ned1/Smp2) protein	join(14286..14360,14490..14562,14595..14742,14858..14949,15031..15612,15726..15891,16010..16296,16401..16501)	Acanthamoeba castellanii str. Neff	14917593
ACA1_041910	CDS	ACA1_041910	NW_004457435.1	16606	19093	R	encoded by transcript ACA1_041910A; GNT-I family protein	complement(join(16606..16698,16783..16953,17057..17183,17283..17358,17435..17564,17632..17726,17798..17921,17989..18124,18189..18311,18385..18626,18710..19093))	Acanthamoeba castellanii str. Neff	14917594
ACA1_041920	CDS	ACA1_041920	NW_004457435.1	19719	21602	D	encoded by transcript ACA1_041920A; deoxyribonuclease II, putative	join(19719..19828,19899..19948,20068..20123,20226..20319,20414..20605,20710..20846,20917..21000,21089..21277,21364..21447,21534..21602)	Acanthamoeba castellanii str. Neff	14917595
ACA1_041930	CDS	ACA1_041930	NW_004457435.1	21711	22331	D	encoded by transcript ACA1_041930A; uncharacterized protein	join(21711..21824,21890..21980,22135..22161,22238..>22331)	Acanthamoeba castellanii str. Neff	14917614
ACA1_041940	CDS	ACA1_041940	NW_004457435.1	22529	23605	D	encoded by transcript ACA1_041940A; Deoxyribonuclease II, putative	join(22529..22667,22745..22881,22970..23053,23125..23208,23289..23393,23432..23605)	Acanthamoeba castellanii str. Neff	14917615
ACA1_041950	CDS	ACA1_041950	NW_004457435.1	24125	26125	D	encoded by transcript ACA1_041950A; deoxyribonuclease II protein, putative	join(24125..24252,24320..24375,24460..24515,24715..24805,24937..25131,25223..25356,25438..25605,25682..25786,25882..25968,26054..26125)	Acanthamoeba castellanii str. Neff	14917616
ACA1_041960	CDS	ACA1_041960	NW_004457435.1	26461	27382	D	encoded by transcript ACA1_041960A; Osmotically inducible protein C, putative	join(26461..26559,26623..26722,26792..26899,26974..27048,27107..27222,27305..27382)	Acanthamoeba castellanii str. Neff	14917617
ACA1_041970	CDS	ACA1_041970	NW_004457435.1	28184	29235	D	encoded by transcript ACA1_041970A; uncharacterized protein	join(28184..28422,28511..28614,28700..29040,29098..29235)	Acanthamoeba castellanii str. Neff	14917618
ACA1_041980	CDS	ACA1_041980	NW_004457435.1	29910	30485	D	encoded by transcript ACA1_041980A; hisactophilin II, putative	join(29910..29928,29954..30058,30138..30236,30301..30485)	Acanthamoeba castellanii str. Neff	14917619
ACA1_041990	CDS	ACA1_041990	NW_004457435.1	30611	32548	R	encoded by transcript ACA1_041990A; endonuclease VIII protein, putative	complement(join(30611..31142,31300..31419,31510..31603,31741..31840,31942..32020,32134..32222,32303..32548))	Acanthamoeba castellanii str. Neff	14917620
ACA1_042000	CDS	ACA1_042000	NW_004457435.1	32596	33358	D	encoded by transcript ACA1_042000A; snRNP core protein SMX5d, putative	join(32596..32601,32869..33027,33108..33212,33287..33358)	Acanthamoeba castellanii str. Neff	14917621
ACA1_042010	CDS	ACA1_042010	NW_004457435.1	33568	35800	R	encoded by transcript ACA1_042010A; Endoalpha-1,2-mannosidase-like protein	complement(join(33568..33738,33841..33965,34075..34147,34219..34304,34376..34484,34577..34625,34692..34740,34827..34898,35049..35172,35265..35360,35437..35508,35576..35663,35730..35800))	Acanthamoeba castellanii str. Neff	14917622
ACA1_042020	CDS	ACA1_042020	NW_004457435.1	36311	39981	R	encoded by transcript ACA1_042020A; zinc finger, C3HC4 type (RING finger) domain containing protein	complement(join(36311..36400,36479..36550,36670..36731,36833..36938,37047..37138,37197..37286,37370..37428,37518..37594,37675..37723,37824..37907,38026..38087,38219..38283,38360..38417,38503..38585,38656..38743,38790..39099,39158..39379,39454..39497,39589..39637,39719..39783,39895..39981))	Acanthamoeba castellanii str. Neff	14917623
ACA1_042030	CDS	ACA1_042030	NW_004457435.1	40822	43440	D	encoded by transcript ACA1_042030A; Sumo domain containing protein	join(40822..41065,41189..41336,41419..41511,41595..41655,41767..41886,41961..42053,42139..42207,42372..42476,42583..42644,42769..43072,43168..43229,43338..43440)	Acanthamoeba castellanii str. Neff	14917624
ACA1_042040	CDS	ACA1_042040	NW_004457435.1	43712	45878	R	encoded by transcript ACA1_042040A; DOM3 exoribonuclease, putative	complement(join(43712..43928,44065..44117,44206..44273,44357..44498,44577..44608,44709..44825,44930..45112,45184..45263,45340..45488,45593..45656,45715..45878))	Acanthamoeba castellanii str. Neff	14917580
ACA1_042070	CDS	ACA1_042070	NW_004457435.1	50840	54166	D	encoded by transcript ACA1_042070A; Dual specificity protein kinase	join(50840..50864,50934..50971,51057..51209,51301..51434,51505..51538,51617..51735,51805..51851,52053..52134,52227..52272,52369..52430,52480..52540,52617..52710,52804..52956,53031..53114,53202..53268,53353..53400,53503..53567,53675..53726,53834..53936,54011..54166)	Acanthamoeba castellanii str. Neff	14917583
ACA1_042080	CDS	ACA1_042080	NW_004457435.1	54255	54473	R	encoded by transcript ACA1_042080A; uncharacterized protein	complement(54255..>54473)	Acanthamoeba castellanii str. Neff	14917584
ACA1_042090	CDS	ACA1_042090	NW_004457435.1	54839	55958	D	encoded by transcript ACA1_042090A; uncharacterized protein	join(54839..54912,54955..55225,55436..55521,55588..55745,55840..55958)	Acanthamoeba castellanii str. Neff	14917585
ACA1_042210	CDS	ACA1_042210	NW_004457435.1	56887	59861	D	encoded by transcript ACA1_042210A; SH2 domain containing Signal transducer and activator of transcription, putative	join(56887..57293,57454..58820,58895..59254,59338..59645,59760..59861)	Acanthamoeba castellanii str. Neff	14917587
ACA1_042220	CDS	ACA1_042220	NW_004457435.1	60089	61778	R	encoded by transcript ACA1_042220A; uncharacterized protein	complement(join(60089..60185,60242..60619,60688..60804,61002..61104,61168..61267,61334..61608,61673..61778))	Acanthamoeba castellanii str. Neff	14917588
ACA1_042230	CDS	ACA1_042230	NW_004457435.1	62367	63836	D	encoded by transcript ACA1_042230A; uncharacterized protein	62367..63836	Acanthamoeba castellanii str. Neff	14917589
ACA1_042240	CDS	ACA1_042240	NW_004457435.1	63957	67809	R	encoded by transcript ACA1_042240A; uncharacterized protein	complement(join(63957..64031,64048..65037,65135..66700,66807..66868,66998..67076,67162..67296,67408..67568,67641..67809))	Acanthamoeba castellanii str. Neff	14917590
ACA1_042250	CDS	ACA1_042250	NW_004457435.1	68777	71298	R	encoded by transcript ACA1_042250A; Phosphoglucomutase, putative	complement(join(68777..69303,69402..69481,69558..69790,69863..69959,70029..70122,70206..70374,70453..70535,70614..70694,70776..70875,71047..71298))	Acanthamoeba castellanii str. Neff	14917591
ACA1_042260	CDS	ACA1_042260	NW_004457435.1	71725	73046	D	encoded by transcript ACA1_042260A; uncharacterized protein	join(71725..71835,72044..72466,72552..72870,72922..73046)	Acanthamoeba castellanii str. Neff	14917592
ACA1_042270	CDS	ACA1_042270	NW_004457435.1	73126	74482	R	encoded by transcript ACA1_042270A; uncharacterized protein	complement(join(73126..73190,73247..73324,73383..73716,73795..74276,74338..74482))	Acanthamoeba castellanii str. Neff	14917598
ACA1_042280	CDS	ACA1_042280	NW_004457435.1	74819	76839	R	encoded by transcript ACA1_042280A; NAD dependent epimerase/dehydratase	complement(join(74819..74884,74979..75047,75138..75201,75294..75376,75442..75514,75641..75774,75853..75879,75950..76077,76169..76325,76471..76586,76599..76839))	Acanthamoeba castellanii str. Neff	14917599
ACA1_042300	CDS	ACA1_042300	NW_004457435.1	81024	81453	R	encoded by transcript ACA1_042300A; uncharacterized protein	complement(join(81024..81094,81165..81453))	Acanthamoeba castellanii str. Neff	14917601
ACA1_042310	CDS	ACA1_042310	NW_004457435.1	82088	84968	R	encoded by transcript ACA1_042310A; amino acid permease	complement(join(82088..82658,82765..82949,83057..83215,83345..83469,83601..83704,83774..83896,84087..84195,84287..84330,84433..84585,84709..84968))	Acanthamoeba castellanii str. Neff	14917602
ACA1_042320	CDS	ACA1_042320	NW_004457435.1	85131	85922	R	encoded by transcript ACA1_042320A; hydroxyisourate hydrolase	complement(join(85131..85241,85338..85492,85619..85922))	Acanthamoeba castellanii str. Neff	14917603
ACA1_042330	CDS	ACA1_042330	NW_004457435.1	86067	87065	D	encoded by transcript ACA1_042330A; Fbox domain containing protein	join(86067..86185,86269..86485,86561..86746,86907..87065)	Acanthamoeba castellanii str. Neff	14917604
ACA1_042340	CDS	ACA1_042340	NW_004457435.1	86405	87836	R	encoded by transcript ACA1_042340A; uncharacterized protein	complement(join(86405..86740,87225..87398,87459..87836))	Acanthamoeba castellanii str. Neff	14917605
ACA1_042450	CDS	ACA1_042450	NW_004457435.1	89303	89707	R	encoded by transcript ACA1_042450A; uncharacterized protein	complement(89303..>89707)	Acanthamoeba castellanii str. Neff	14917606
ACA1_042560	CDS	ACA1_042560	NW_004457435.1	89953	90312	D	encoded by transcript ACA1_042560A; uncharacterized protein	<89953..>90312	Acanthamoeba castellanii str. Neff	14917607
ACA1_042670	CDS	ACA1_042670	NW_004457435.1	91728	92411	D	encoded by transcript ACA1_042670A; RAN2 small Ras GTP-binding nuclear protein, putative	join(<91728..91849,91951..92145,92240..92411)	Acanthamoeba castellanii str. Neff	14917608
ACA1_042680	CDS	ACA1_042680	NW_004457435.1	92574	93581	R	encoded by transcript ACA1_042680A; cleavage and polyadenylation specific factor 5, putative	complement(join(92574..92710,92824..92899,93060..93216,93298..93581))	Acanthamoeba castellanii str. Neff	14917609
ACA1_042690	CDS	ACA1_042690	NW_004457435.1	94175	95101	D	encoded by transcript ACA1_042690A; uncharacterized protein	join(94175..94234,94313..94395,94482..94620,94699..94919,95083..95101)	Acanthamoeba castellanii str. Neff	14917610
ACA1_042800	CDS	ACA1_042800	NW_004457435.1	97550	100843	R	encoded by transcript ACA1_042800A; FG-GAP repeat-containing protein	complement(join(<97550..97572,97592..98445,98571..98623,98740..98820,98894..99032,99124..99303,99419..99609,99706..99851,99950..100055,100138..100313,100384..100619,100691..100843))	Acanthamoeba castellanii str. Neff	14917611
ACA1_042810	CDS	ACA1_042810	NW_004457435.1	100856	101401	R	encoded by transcript ACA1_042810A; uncharacterized protein	complement(join(100856..100998,101020..101121,101254..101401))	Acanthamoeba castellanii str. Neff	14917612
ACA1_042820	CDS	ACA1_042820	NW_004457435.1	101935	103283	R	encoded by transcript ACA1_042820A; uncharacterized protein	complement(join(101935..101978,102077..102380,102423..103283))	Acanthamoeba castellanii str. Neff	14917613
ACA1_042830	CDS	ACA1_042830	NW_004457435.1	103300	103937	R	encoded by transcript ACA1_042830A; uncharacterized protein	complement(join(103300..103575,103689..103937))	Acanthamoeba castellanii str. Neff	14917628
ACA1_042840	CDS	ACA1_042840	NW_004457435.1	104393	105749	D	encoded by transcript ACA1_042840A; uncharacterized protein	join(104393..104456,104965..105749)	Acanthamoeba castellanii str. Neff	14917629
ACA1_042850	CDS	ACA1_042850	NW_004457435.1	106093	111138	D	encoded by transcript ACA1_042850A; uncharacterized protein	join(106093..106136,106154..106349,106463..108070,108267..108421,108734..108812,108937..109596,109864..111138)	Acanthamoeba castellanii str. Neff	14917630
ACA1_042860	CDS	ACA1_042860	NW_004457435.1	111504	113421	D	encoded by transcript ACA1_042860A; carrier superfamily protein	join(111504..111680,111776..111825,111894..112030,112133..112264,112420..112516,112718..112787,112903..112971,113102..113176,113260..113421)	Acanthamoeba castellanii str. Neff	14917631
ACA1_042870	CDS	ACA1_042870	NW_004457435.1	113578	116447	R	encoded by transcript ACA1_042870A; Dual specificity protein kinase	complement(join(113578..113797,114067..114170,114259..114529,114630..114771,114872..115230,115338..115438,115575..115700,115821..116061,116209..116447))	Acanthamoeba castellanii str. Neff	14917632
ACA1_042880	CDS	ACA1_042880	NW_004457435.1	117062	117609	D	encoded by transcript ACA1_042880A; uncharacterized protein	join(117062..117352,117541..117609)	Acanthamoeba castellanii str. Neff	14917633
ACA1_042990	CDS	ACA1_042990	NW_004457435.1	117606	118009	R	encoded by transcript ACA1_042990A; uncharacterized protein	complement(join(117606..117825,117915..118009))	Acanthamoeba castellanii str. Neff	14917634
ACA1_043100	CDS	ACA1_043100	NW_004457435.1	118937	120473	R	encoded by transcript ACA1_043100A; dual specificity protein kinase, putative	complement(join(<118937..119276,119366..119466,119605..119730,119858..120098,120235..120473))	Acanthamoeba castellanii str. Neff	14917635
ACA1_043110	CDS	ACA1_043110	NW_004457435.1	120955	122397	D	encoded by transcript ACA1_043110A; calponin domain containing protein	join(120955..121759,121815..122006,122079..122256,122331..122397)	Acanthamoeba castellanii str. Neff	14917636
ACA1_043120	CDS	ACA1_043120	NW_004457435.1	122553	125563	R	encoded by transcript ACA1_043120A; putative cleavage and polyadenylation specificity factor, putative	complement(join(122553..122759,122859..123001,123104..123245,123319..123420,123519..123599,123696..123849,123956..124161,124263..124358,124493..124610,124719..124839,124908..124997,125094..125189,125280..125384,125455..125563))	Acanthamoeba castellanii str. Neff	14917637
ACA1_043130	CDS	ACA1_043130	NW_004457435.1	125685	126323	R	encoded by transcript ACA1_043130A; putative cleavage and polyadenylation specificity factor, putative	complement(join(125685..125792,125857..125902,125977..126077,126174..126323))	Acanthamoeba castellanii str. Neff	14917638
ACA1_043140	CDS	ACA1_043140	NW_004457435.1	126512	129003	R	encoded by transcript ACA1_043140A; zinc finger domain containing protein	complement(join(126512..126729,126789..126915,127023..127229,127355..127441,127538..127624,127705..127872,127983..128078,128158..128369,128457..128561,128653..128691,128772..129003))	Acanthamoeba castellanii str. Neff	14917639
ACA1_043150	CDS	ACA1_043150	NW_004457435.1	129532	133166	R	encoded by transcript ACA1_043150A; Rab GTPase domain containing protein	complement(join(129532..129606,129754..129820,129910..130391,130448..130528,130626..130724,130801..130977,131076..131236,131315..131364,131450..131517,131607..131791,131879..132301,132392..133166))	Acanthamoeba castellanii str. Neff	14917640
ACA1_043160	CDS	ACA1_043160	NW_004457435.1	133354	134871	D	encoded by transcript ACA1_043160A; Ankyrin repeat containing protein	join(133354..133486,133565..133683,133794..133864,133933..134002,134082..134181,134383..134486,134522..134551,134785..134871)	Acanthamoeba castellanii str. Neff	14917641
ACA1_043170	CDS	ACA1_043170	NW_004457435.1	134975	135219	R	encoded by transcript ACA1_043170A; uncharacterized protein	complement(join(134975..135058,135130..135219))	Acanthamoeba castellanii str. Neff	14917642
ACA1_043180	CDS	ACA1_043180	NW_004457435.1	135596	136597	D	encoded by transcript ACA1_043180A; tetratricopeptide repeat domain containing protein	join(135596..135721,135805..136234,136335..136597)	Acanthamoeba castellanii str. Neff	14917643
ACA1_043190	CDS	ACA1_043190	NW_004457435.1	136675	137412	R	encoded by transcript ACA1_043190A; uncharacterized protein	complement(join(136675..136795,136871..137070,137139..137290,137394..137412))	Acanthamoeba castellanii str. Neff	14917644
ACA1_043200	CDS	ACA1_043200	NW_004457435.1	137694	138187	R	encoded by transcript ACA1_043200A; peroxisomal D3,D2enoyl-CoA isomerase	complement(join(137694..137786,137869..138025,138093..138187))	Acanthamoeba castellanii str. Neff	14917645
ACA1_043210	CDS	ACA1_043210	NW_004457435.1	138907	139116	R	encoded by transcript ACA1_043210A; uncharacterized protein	complement(138907..139116)	Acanthamoeba castellanii str. Neff	14917646
ACA1_043220	CDS	ACA1_043220	NW_004457435.1	139549	141224	R	encoded by transcript ACA1_043220A; oxidoreductase family protein	complement(join(139549..139871,139933..140094,140240..140338,140443..140568,140671..141040,141126..141224))	Acanthamoeba castellanii str. Neff	14917647
ACA1_043230	CDS	ACA1_043230	NW_004457435.1	141693	143373	R	encoded by transcript ACA1_043230A; uncharacterized protein	complement(join(141693..141698,141734..141814,141884..141988,142056..142171,142263..142547,142615..142705,142767..142817,142897..142962,143115..143166,143237..143373))	Acanthamoeba castellanii str. Neff	14917648
ACA1_043240	CDS	ACA1_043240	NW_004457435.1	143545	144363	R	encoded by transcript ACA1_043240A; Ran GTPase binding, putative	complement(join(143545..143571,143610..143717,143828..143902,143962..144156,144250..144363))	Acanthamoeba castellanii str. Neff	14917649
ACA1_043250	CDS	ACA1_043250	NW_004457435.1	145610	147050	D	encoded by transcript ACA1_043250A; ubiquitin, putative	join(145610..145712,145809..145990,146077..146193,146316..146421,146519..146620,146706..146837,146917..147050)	Acanthamoeba castellanii str. Neff	14917561
ACA1_043260	CDS	ACA1_043260	NW_004457435.1	147160	150585	R	encoded by transcript ACA1_043260A; long chain acylcoA synthetase	complement(join(147160..147264,147348..147461,147615..147682,147799..147917,148013..148141,148228..148366,148457..148575,148660..148786,148859..149036,149107..149280,149364..149453,149531..149616,149713..149794,149868..149944,150056..150161,150307..150585))	Acanthamoeba castellanii str. Neff	14917562
ACA1_043270	CDS	ACA1_043270	NW_004457435.1	151043	152097	R	encoded by transcript ACA1_043270A; uncharacterized protein	complement(join(151043..151114,151203..151303,151421..151514,151632..151700,151790..151930,152050..152097))	Acanthamoeba castellanii str. Neff	14917563
ACA1_043280	CDS	ACA1_043280	NW_004457435.1	152589	156366	R	encoded by transcript ACA1_043280A; uncharacterized protein	complement(join(152589..152767,152864..153038,153115..153190,153299..153374,153480..153596,153677..153785,153895..153983,154064..154127,154210..154317,154420..154483,154570..154647,154737..154807,154932..155869,155985..156366))	Acanthamoeba castellanii str. Neff	14917564
ACA1_043290	CDS	ACA1_043290	NW_004457435.1	157126	157785	D	encoded by transcript ACA1_043290A; glutathione stransferase	157126..157785	Acanthamoeba castellanii str. Neff	14917565
ACA1_043300	CDS	ACA1_043300	NW_004457435.1	158055	162013	D	encoded by transcript ACA1_043300A; shortchain dehydrogenase	join(158055..158178,158445..158593,158693..158917,159014..159084,159219..159242,159324..159471,159571..159634,159725..159811,159886..159959,160087..160187,160269..160314,160461..160535,160652..160728,160830..161172,161244..161366,161572..161665,161764..161832,161919..162013)	Acanthamoeba castellanii str. Neff	14917566
ACA1_043310	CDS	ACA1_043310	NW_004457435.1	162138	162939	R	encoded by transcript ACA1_043310A; uncharacterized protein	complement(join(162138..162450,162564..162682,162835..162939))	Acanthamoeba castellanii str. Neff	14917567
ACA1_043320	CDS	ACA1_043320	NW_004457435.1	163782	165115	D	encoded by transcript ACA1_043320A; ubiquitin domain containing protein	join(163782..163884,163985..164160,164250..164469,164554..164658,164731..164865,164979..165115)	Acanthamoeba castellanii str. Neff	14917568
ACA1_043330	CDS	ACA1_043330	NW_004457435.1	165184	165455	R	encoded by transcript ACA1_043330A; uncharacterized protein	complement(join(165184..165280,165358..165455))	Acanthamoeba castellanii str. Neff	14917569
ACA1_043340	CDS	ACA1_043340	NW_004457435.1	165745	167709	D	encoded by transcript ACA1_043340A; uncharacterized protein	join(165745..165843,165953..166036,166141..166299,166505..166654,166853..167032,167113..167225,167360..167436,167528..167709)	Acanthamoeba castellanii str. Neff	14917570
ACA1_043350	CDS	ACA1_043350	NW_004457435.1	167812	169513	D	encoded by transcript ACA1_043350A; Factin capping protein alpha subunit	join(167812..168004,168219..168365,168503..168691,168806..168904,169049..169182,169252..169329,169448..169513)	Acanthamoeba castellanii str. Neff	14917571
ACA1_043360	CDS	ACA1_043360	NW_004457435.1	169648	173738	R	encoded by transcript ACA1_043360A; RhoGAP domain containing protein	complement(join(169648..169756,169882..170130,170237..170396,170498..170645,170739..170930,171018..171137,171251..171412,171530..171628,171914..172002,172129..172216,172301..172363,172520..172590,172666..172715,172806..172831,172943..173047,173388..173738))	Acanthamoeba castellanii str. Neff	14917572
ACA1_043570	CDS	ACA1_043570	NW_004457435.1	174027	175431	D	encoded by transcript ACA1_043570A; hydrolase, alpha/beta fold domain containing protein	join(174027..174135,174200..174319,174403..174550,174682..174848,174996..175177,175294..175431)	Acanthamoeba castellanii str. Neff	14917573
ACA1_043580	CDS	ACA1_043580	NW_004457435.1	175923	179266	R	encoded by transcript ACA1_043580A; calmodulinbinding protein, putative	complement(join(175923..176057,176145..176252,176413..176511,176632..176819,176923..177040,177148..177236,177369..177456,177541..177603,177751..177821,177898..177947,178042..178067,178185..178723,178826..178911,179037..179170,179234..179266))	Acanthamoeba castellanii str. Neff	14917574
ACA1_043590	CDS	ACA1_043590	NW_004457435.1	180526	181140	R	encoded by transcript ACA1_043590A; uncharacterized protein	complement(join(180526..180594,180697..180806,180883..180998,181082..181140))	Acanthamoeba castellanii str. Neff	14917575
ACA1_043600	CDS	ACA1_043600	NW_004457435.1	181489	182276	R	encoded by transcript ACA1_043600A; Peroxiredoxin2F, mitochondrial, putative	complement(join(181489..181708,181793..181911,181980..182107,182216..182276))	Acanthamoeba castellanii str. Neff	14917576
ACA1_043610	CDS	ACA1_043610	NW_004457435.1	182384	184825	R	encoded by transcript ACA1_043610A; FYVE zinc finger domain containing protein	complement(join(182384..182815,183012..183065,183096..183233,183394..183520,183617..183709,183813..183936,184025..184100,184178..184249,184458..184596,184719..>184825))	Acanthamoeba castellanii str. Neff	14917577
ACA1_043620	CDS	ACA1_043620	NW_004457435.1	185437	186312	D	encoded by transcript ACA1_043620A; 2fe2s domain containing protein	join(185437..185684,185813..185905,186003..186120,186244..186312)	Acanthamoeba castellanii str. Neff	14917578
ACA1_043630	CDS	ACA1_043630	NW_004457435.1	186372	188514	D	encoded by transcript ACA1_043630A; Obg family GTPase CgtA, putative	join(186372..186614,186815..186902,186974..187041,187111..187182,187203..187232,187331..187401,187486..187622,187707..187912,188054..188230,188341..188514)	Acanthamoeba castellanii str. Neff	14917579
ACA1_043640	CDS	ACA1_043640	NW_004457435.1	188679	191370	D	encoded by transcript ACA1_043640A; poly ADP-ribose glycohydrolase (PARG) protein, putative	join(188679..188925,189061..189187,189305..189383,189486..189570,189671..189766,189901..190085,190179..190234,190357..190479,190557..190649,190728..190816,190891..191058,191180..191370)	Acanthamoeba castellanii str. Neff	14917556
ACA1_043650	CDS	ACA1_043650	NW_004457435.1	191458	193818	R	encoded by transcript ACA1_043650A; poly(adpribose) glycohydrolase	complement(join(191458..191600,191769..191936,192006..192319,192423..192478,192574..192650,192822..192923,193029..193209,193335..193413,193507..193636,193767..193818))	Acanthamoeba castellanii str. Neff	14917557
ACA1_043660	CDS	ACA1_043660	NW_004457435.1	194511	197394	D	encoded by transcript ACA1_043660A; SPRY and ankyrin domain containing protein	join(194511..194790,194853..194992,195083..195248,195389..195487,195580..195716,195803..195938,196056..196188,196280..196412,196532..196664,196732..196999,197076..197394)	Acanthamoeba castellanii str. Neff	14917558
ACA1_043670	CDS	ACA1_043670	NW_004457435.1	197433	204225	D	encoded by transcript ACA1_043670A; ankyrin repeat-containing protein	join(197433..197472,197556..197630,197748..197840,197931..198014,198090..198202,198358..198405,198497..198595,198673..199075,199164..199329,199420..199487,199567..199658,199771..199869,199961..199988,200000..200121,200192..200258,200426..200499,200581..200817,200932..201113,201251..201363,201473..201598,201671..201862,201993..202073,202174..202274,202653..202761,202891..202977,203099..203237,203348..203539,203622..203968,204080..>204225)	Acanthamoeba castellanii str. Neff	14917559
ACA1_382080	CDS	ACA1_382080	NW_004457434.1	555	1387	R	encoded by transcript ACA1_382080A; Autophagyrelated protein 12, putative	complement(join(555..614,722..784,872..964,1086..1129,1185..1205,1306..1387))	Acanthamoeba castellanii str. Neff	14917550
ACA1_382090	CDS	ACA1_382090	NW_004457434.1	1697	1974	D	encoded by transcript ACA1_382090A; uncharacterized protein	join(1697..1850,1922..1974)	Acanthamoeba castellanii str. Neff	14917505
ACA1_382100	CDS	ACA1_382100	NW_004457434.1	2051	2965	R	encoded by transcript ACA1_382100A; Fbox domain containing protein	complement(join(2051..2298,2378..2525,2622..2709,2790..2965))	Acanthamoeba castellanii str. Neff	14917551
ACA1_382110	CDS	ACA1_382110	NW_004457434.1	3182	3955	R	encoded by transcript ACA1_382110A; uncharacterized protein	complement(join(3182..3303,3416..3503,3610..3850,3927..3955))	Acanthamoeba castellanii str. Neff	14917552
ACA1_382120	CDS	ACA1_382120	NW_004457434.1	4648	5619	D	encoded by transcript ACA1_382120A; uncharacterized protein	join(4648..4686,4768..4842,5022..5329,5562..5619)	Acanthamoeba castellanii str. Neff	14917553
ACA1_382130	CDS	ACA1_382130	NW_004457434.1	6221	7515	D	encoded by transcript ACA1_382130A; raslike protein	join(6221..6275,6365..6428,6564..6704,6716..6842,7004..7138,7208..7273,7357..7515)	Acanthamoeba castellanii str. Neff	14917554
ACA1_382140	CDS	ACA1_382140	NW_004457434.1	8002	9553	D	encoded by transcript ACA1_382140A; syntaxin 6, putative	join(8002..8030,8182..8302,8490..8636,8726..8836,9009..9115,9256..9375,9532..9553)	Acanthamoeba castellanii str. Neff	14917555
ACA1_382250	CDS	ACA1_382250	NW_004457434.1	9584	12471	R	encoded by transcript ACA1_382250A; aminotransferase, class I/II superfamily protein	complement(join(<9584..9758,9849..10130,10243..10338,10405..10471,10586..10704,10825..10931,11020..11075,11144..11238,11324..11449,11546..11630,11847..11915,12036..12120,12374..12471))	Acanthamoeba castellanii str. Neff	14917471
ACA1_382260	CDS	ACA1_382260	NW_004457434.1	12680	13999	R	encoded by transcript ACA1_382260A; CBS domain containing protein	complement(join(12680..12852,12951..13506,13610..13999))	Acanthamoeba castellanii str. Neff	14917472
ACA1_382270	CDS	ACA1_382270	NW_004457434.1	14476	19380	R	encoded by transcript ACA1_382270A; ATPase/histidine kinase/DNA gyrase B/HSP90 domain containing protein	complement(join(14476..14556,14690..14827,14893..15007,15098..15803,15893..16074,16171..16317,16441..17649,17672..17748,17833..17965,18050..18197,18277..18369,18457..18643,18740..18879,19079..19199,19297..19380))	Acanthamoeba castellanii str. Neff	14917473
ACA1_382280	CDS	ACA1_382280	NW_004457434.1	20154	21982	R	encoded by transcript ACA1_382280A; Tyrosine aminotransferase, putative	complement(join(20154..20240,20325..20453,20573..20831,20948..21020,21084..21291,21370..21587,21655..21774,21841..21982))	Acanthamoeba castellanii str. Neff	14917474
ACA1_382290	CDS	ACA1_382290	NW_004457434.1	23006	23721	D	encoded by transcript ACA1_382290A; uncharacterized protein	join(23006..23065,23182..23274,23347..23414,23497..23618,23681..23721)	Acanthamoeba castellanii str. Neff	14917475
ACA1_382300	CDS	ACA1_382300	NW_004457434.1	24823	27022	D	encoded by transcript ACA1_382300A; uncharacterized protein	join(24823..24976,25194..25422,25459..26560,26606..27022)	Acanthamoeba castellanii str. Neff	14917476
ACA1_382310	CDS	ACA1_382310	NW_004457434.1	27550	28291	R	encoded by transcript ACA1_382310A; uncharacterized protein	complement(join(27550..27592,27716..27872,27966..28026,28090..28115,28222..28291))	Acanthamoeba castellanii str. Neff	14917477
ACA1_382330	CDS	ACA1_382330	NW_004457434.1	29798	30572	R	encoded by transcript ACA1_382330A; uncharacterized protein	complement(join(29798..29837,29920..29991,30098..30230,30434..30572))	Acanthamoeba castellanii str. Neff	14917479
ACA1_382340	CDS	ACA1_382340	NW_004457434.1	33164	33421	D	encoded by transcript ACA1_382340A; retrotransposon RIRE1 poly protein, putative	33164..33421	Acanthamoeba castellanii str. Neff	14917480
ACA1_382350	CDS	ACA1_382350	NW_004457434.1	34904	36945	R	encoded by transcript ACA1_382350A; RFX DNAbinding domain containing protein	complement(join(34904..36281,36387..36494,36558..36647,36887..36945))	Acanthamoeba castellanii str. Neff	14917481
ACA1_382360	CDS	ACA1_382360	NW_004457434.1	37754	38560	D	encoded by transcript ACA1_382360A; Fbox domain containing protein	join(37754..37875,37973..38176,38269..38388,38458..38560)	Acanthamoeba castellanii str. Neff	14917482
ACA1_382370	CDS	ACA1_382370	NW_004457434.1	38878	43378	R	encoded by transcript ACA1_382370A; acid alphaglucosidase	complement(join(38878..39078,39180..39410,39510..39719,39867..39961,40077..40175,40302..40526,40614..40814,40982..41104,41184..41319,41419..41495,41615..41699,41823..42005,42086..42250,42321..42433,42471..42663,42749..42876,42985..43174,43304..43378))	Acanthamoeba castellanii str. Neff	14917483
ACA1_382380	CDS	ACA1_382380	NW_004457434.1	44088	47074	D	encoded by transcript ACA1_382380A; WD domain, G-beta repeat-containing protein	join(44088..44150,44270..44374,44441..44688,44813..44910,44990..45110,45217..45368,45449..45527,45613..45685,45776..45874,45945..46028,46108..46149,46236..46296,46395..47074)	Acanthamoeba castellanii str. Neff	14917484
ACA1_382390	CDS	ACA1_382390	NW_004457434.1	47452	51468	D	encoded by transcript ACA1_382390A; glycosyl hydrolase family 10, putative	join(47452..47580,47719..47792,47871..47955,48033..48227,48325..48538,48637..48797,48916..49084,49194..49350,49438..49656,49773..50010,50098..50822,50901..51468)	Acanthamoeba castellanii str. Neff	14917495
ACA1_382400	CDS	ACA1_382400	NW_004457434.1	51565	55388	R	encoded by transcript ACA1_382400A; uncharacterized protein	complement(join(51565..51712,51811..51955,52034..52249,52402..52636,52756..52899,52999..53144,53250..53362,53454..53595,53710..53881,53955..54148,54351..54537,54635..54722,54883..55044,55127..55250,55343..55388))	Acanthamoeba castellanii str. Neff	14917496
ACA1_382510	CDS	ACA1_382510	NW_004457434.1	57953	60493	D	encoded by transcript ACA1_382510A; uncharacterized protein	join(57953..58048,58111..58485,58571..59102,59333..59861,60211..60493)	Acanthamoeba castellanii str. Neff	14917497
ACA1_382520	CDS	ACA1_382520	NW_004457434.1	60561	62058	D	encoded by transcript ACA1_382520A; integrator complex subunit 2, putative	join(60561..60675,60787..60947,61034..61129,61221..61306,61427..61619,61722..61858,61926..62058)	Acanthamoeba castellanii str. Neff	14917498
ACA1_382530	CDS	ACA1_382530	NW_004457434.1	62337	66140	D	encoded by transcript ACA1_382530A; uncharacterized protein	join(62337..62515,62766..62928,63005..63085,63169..63344,63421..63737,63857..64034,64135..64324,64399..64499,64631..64886,64964..65032,65169..65289,65443..65698,65773..65930,66031..66140)	Acanthamoeba castellanii str. Neff	14917499
ACA1_382540	CDS	ACA1_382540	NW_004457434.1	66240	69919	R	encoded by transcript ACA1_382540A; MYND finger domain containing protein	complement(join(66240..67053,67233..67417,67536..67630,67728..67796,67923..67970,68160..69523,69669..69919))	Acanthamoeba castellanii str. Neff	14917500
ACA1_382550	CDS	ACA1_382550	NW_004457434.1	70262	71054	D	encoded by transcript ACA1_382550A; sulfur metabolism negative regulator SconC, putative	join(70262..70367,70430..70485,70597..70755,70867..70936,71005..71054)	Acanthamoeba castellanii str. Neff	14917501
ACA1_382570	CDS	ACA1_382570	NW_004457434.1	75068	75974	D	encoded by transcript ACA1_382570A; uncharacterized protein	join(75068..75187,75386..75451,75520..75642,75822..75974)	Acanthamoeba castellanii str. Neff	14917503
ACA1_382580	CDS	ACA1_382580	NW_004457434.1	76120	78470	D	encoded by transcript ACA1_382580A; LBP / BPI / CETP family, Cterminal domain containing protein	join(76120..76219,76426..76627,76715..76768,76858..76909,76995..77104,77184..77280,77372..77714,77841..78043,78118..78183,78264..78470)	Acanthamoeba castellanii str. Neff	14917504
ACA1_382590	CDS	ACA1_382590	NW_004457434.1	79131	80985	R	encoded by transcript ACA1_382590A; actin subfamily protein	complement(join(79131..79390,79461..79717,79770..79789,79898..80058,80112..80285,80349..80485,80561..80985))	Acanthamoeba castellanii str. Neff	14917485
ACA1_382600	CDS	ACA1_382600	NW_004457434.1	81128	81369	R	encoded by transcript ACA1_382600A; uncharacterized protein	complement(join(81128..81333,81351..81369))	Acanthamoeba castellanii str. Neff	14917486
ACA1_382610	CDS	ACA1_382610	NW_004457434.1	81681	85621	R	encoded by transcript ACA1_382610A; von Willebrand factor type A domain containing protein	complement(join(81681..81883,82015..82871,83023..83378,83534..83801,83960..84241,84326..84488,84639..84897,85054..85169,85321..85411,85502..85621))	Acanthamoeba castellanii str. Neff	14917487
ACA1_382620	CDS	ACA1_382620	NW_004457434.1	86048	87593	D	encoded by transcript ACA1_382620A; serpin (serine proteinase inhibitor) superfamily protein	join(86048..86314,86396..86613,86696..86972,87064..87263,87464..87593)	Acanthamoeba castellanii str. Neff	14917488
ACA1_382630	CDS	ACA1_382630	NW_004457434.1	87766	90340	R	encoded by transcript ACA1_382630A; LBP / BPI / CETP family, Cterminal domain containing protein	complement(join(87766..87972,88097..88162,88236..88438,88555..88603,88698..88817,88937..89089,89197..89293,89384..89493,89604..89655,89764..89817,89942..90143,90247..90340))	Acanthamoeba castellanii str. Neff	14917489
ACA1_382640	CDS	ACA1_382640	NW_004457434.1	90667	95293	D	encoded by transcript ACA1_382640A; von Willebrand factor type A domain containing protein	join(90667..90786,90897..90987,91121..91236,91374..91632,91808..91970,92072..92353,92832..93099,93254..93621,93778..94025,94137..94859,95091..95293)	Acanthamoeba castellanii str. Neff	14917490
ACA1_382650	CDS	ACA1_382650	NW_004457434.1	95764	96829	D	encoded by transcript ACA1_382650A; uncharacterized protein	join(95764..95821,95944..96014,96088..96466,96627..96829)	Acanthamoeba castellanii str. Neff	14917491
ACA1_382660	CDS	ACA1_382660	NW_004457434.1	96950	98916	D	encoded by transcript ACA1_382660A; actin subfamily protein	join(96950..97371,97509..97585,97646..97773,97939..98052,98134..98464,98604..98783,98885..98916)	Acanthamoeba castellanii str. Neff	14917492
ACA1_382670	CDS	ACA1_382670	NW_004457434.1	99068	108458	R	encoded by transcript ACA1_382670A; DEAD/DEAH box helicase domain containing protein	complement(join(99068..99484,99496..99585,99687..100202,100869..100912,100995..101063,101294..101437,101554..101691,101799..101914,102031..102220,102293..102350,102416..102468,103040..103598,103718..104230,104747..104790,104870..104938,105102..105245,105362..105499,105667..105724,105790..105849,105922..106020,106218..106289,106367..106456,106529..106626,106710..106782,106867..106935,106998..107081,107193..107251,107314..107399,107461..107599,107703..108239,108305..108458))	Acanthamoeba castellanii str. Neff	14917493
ACA1_382880	CDS	ACA1_382880	NW_004457434.1	108835	109710	R	encoded by transcript ACA1_382880A; methyltransferase	complement(108835..109710)	Acanthamoeba castellanii str. Neff	14917494
ACA1_382890	CDS	ACA1_382890	NW_004457434.1	110512	111662	D	encoded by transcript ACA1_382890A; uncharacterized protein	join(110512..110756,110846..111662)	Acanthamoeba castellanii str. Neff	14917507
ACA1_382900	CDS	ACA1_382900	NW_004457434.1	111713	112579	R	encoded by transcript ACA1_382900A; ADPribosylation factor, putative	complement(join(111713..112026,112111..112168,112291..112394,112495..112579))	Acanthamoeba castellanii str. Neff	14917508
ACA1_382910	CDS	ACA1_382910	NW_004457434.1	113423	117518	D	encoded by transcript ACA1_382910A; RhoGEF domain containing protein	join(113423..113584,113709..113906,113986..114106,114342..114507,114565..114663,114738..114913,115016..115146,115213..115419,115523..115804,115887..116070,116188..116303,116424..117518)	Acanthamoeba castellanii str. Neff	14917509
ACA1_382920	CDS	ACA1_382920	NW_004457434.1	118211	120755	R	encoded by transcript ACA1_382920A; Ras subfamily protein	complement(join(118211..118413,118509..118628,118728..118910,118984..119112,119199..119288,119371..119536,119613..119768,119852..120003,120077..120156,120228..120334,120417..120592,120665..120755))	Acanthamoeba castellanii str. Neff	14917510
ACA1_382930	CDS	ACA1_382930	NW_004457434.1	121113	121730	R	encoded by transcript ACA1_382930A; Proteasome maturation factor UMP1	complement(join(121113..121177,121257..121452,121529..121645,121728..121730))	Acanthamoeba castellanii str. Neff	14917511
ACA1_383050	CDS	ACA1_383050	NW_004457434.1	126014	133150	D	encoded by transcript ACA1_383050A; myosin head (motor domain) domain containing protein	join(126014..126090,126214..126265,126378..126482,126562..126717,126840..126988,127083..127287,127388..127451,127559..127708,127801..127853,127914..128052,128138..128175,128271..128513,128606..129010,129167..129254,129325..129419,129443..129538,129612..129727,129859..130024,130109..130206,130298..130435,130503..130654,130764..130908,131003..131168,131252..131482,131565..131682,131792..132036,132076..132217,132309..132442,132560..132774,132860..133015,133108..133150)	Acanthamoeba castellanii str. Neff	14917513
ACA1_383060	CDS	ACA1_383060	NW_004457434.1	133230	134210	D	encoded by transcript ACA1_383060A; uncharacterized protein	join(133230..133477,133861..134017,134124..134210)	Acanthamoeba castellanii str. Neff	14917514
ACA1_383070	CDS	ACA1_383070	NW_004457434.1	134494	136087	D	encoded by transcript ACA1_383070A; CBS domain containing protein	join(134494..134695,134775..134923,134998..135091,135160..135229,135248..135449,135597..135668,135739..135825,135917..136087)	Acanthamoeba castellanii str. Neff	14917515
ACA1_383080	CDS	ACA1_383080	NW_004457434.1	136362	137490	D	encoded by transcript ACA1_383080A; SAP domain containing protein	join(136362..136480,136562..136749,136817..137004,137104..137490)	Acanthamoeba castellanii str. Neff	14917516
ACA1_383090	CDS	ACA1_383090	NW_004457434.1	137394	139806	R	encoded by transcript ACA1_383090A; Ras subfamily protein	complement(join(137394..137442,137456..137498,137611..137751,137826..137942,138046..138234,138388..138513,138793..138925,139007..139162,139235..139475,139572..139633,139744..139806))	Acanthamoeba castellanii str. Neff	14917517
ACA1_383100	CDS	ACA1_383100	NW_004457434.1	139928	141468	D	encoded by transcript ACA1_383100A; uncharacterized protein	join(139928..140154,140232..140290,140385..140527,140659..140987,141062..141138,141212..141468)	Acanthamoeba castellanii str. Neff	14917518
ACA1_383110	CDS	ACA1_383110	NW_004457434.1	141554	142147	R	encoded by transcript ACA1_383110A; raslike protein	complement(141554..142147)	Acanthamoeba castellanii str. Neff	14917519
ACA1_383120	CDS	ACA1_383120	NW_004457434.1	142523	144780	R	encoded by transcript ACA1_383120A; RFX DNAbinding domain containing protein	complement(join(142523..143905,143996..144176,144344..144780))	Acanthamoeba castellanii str. Neff	14917520
ACA1_383130	CDS	ACA1_383130	NW_004457434.1	145839	146544	R	encoded by transcript ACA1_383130A; uncharacterized protein	complement(join(145839..145847,145862..145923,146025..146544))	Acanthamoeba castellanii str. Neff	14917521
ACA1_383140	CDS	ACA1_383140	NW_004457434.1	147193	150175	D	encoded by transcript ACA1_383140A; SAP domain containing protein	join(147193..147360,147474..147563,147643..149712,149831..150175)	Acanthamoeba castellanii str. Neff	14917522
ACA1_383150	CDS	ACA1_383150	NW_004457434.1	150109	151146	R	encoded by transcript ACA1_383150A; nacetylglucosaminyl-phosphatidylinositol de-n-acetylase	complement(join(150109..150120,150253..151146))	Acanthamoeba castellanii str. Neff	14917523
ACA1_383160	CDS	ACA1_383160	NW_004457434.1	151406	154087	D	encoded by transcript ACA1_383160A; uncharacterized protein	join(151406..151460,151530..151752,151834..151887,153709..154087)	Acanthamoeba castellanii str. Neff	14917524
ACA1_383370	CDS	ACA1_383370	NW_004457434.1	155908	156953	D	encoded by transcript ACA1_383370A; GTPase cRac1B, putative	join(155908..155983,156051..156091,156160..156222,156295..156474,156553..156606,156678..156953)	Acanthamoeba castellanii str. Neff	14917525
ACA1_383380	CDS	ACA1_383380	NW_004457434.1	157086	159421	D	encoded by transcript ACA1_383380A; lysosomal ProX carboxypeptidase	join(157086..157191,157255..157388,157469..157583,157708..157953,158029..158112,158201..158416,158508..158649,158723..158777,158839..158948,159032..159102,159170..159237,159299..159421)	Acanthamoeba castellanii str. Neff	14917526
ACA1_383390	CDS	ACA1_383390	NW_004457434.1	159658	160001	D	encoded by transcript ACA1_383390A; uncharacterized protein	join(159658..159683,159707..160001)	Acanthamoeba castellanii str. Neff	14917527
ACA1_383400	CDS	ACA1_383400	NW_004457434.1	160484	161338	R	encoded by transcript ACA1_383400A; uncharacterized protein	complement(join(160484..161049,161134..161338))	Acanthamoeba castellanii str. Neff	14917528
ACA1_383410	CDS	ACA1_383410	NW_004457434.1	161857	163016	D	encoded by transcript ACA1_383410A; elongation factor2, putative	join(161857..162120,162219..162290,162347..162666,162812..162896,162981..163016)	Acanthamoeba castellanii str. Neff	14917529
ACA1_383420	CDS	ACA1_383420	NW_004457434.1	163670	164171	R	encoded by transcript ACA1_383420A; ribosomal protein L32, putative	complement(join(163670..163981,164082..164171))	Acanthamoeba castellanii str. Neff	14917530
ACA1_383430	CDS	ACA1_383430	NW_004457434.1	164503	167151	D	encoded by transcript ACA1_383430A; surp module domain containing protein	join(164503..164542,164652..164821,164920..165053,165196..166334,166434..166591,166696..166880,166962..167151)	Acanthamoeba castellanii str. Neff	14917531
ACA1_383440	CDS	ACA1_383440	NW_004457434.1	167413	167733	D	encoded by transcript ACA1_383440A; uncharacterized protein	join(167413..167438,167493..167733)	Acanthamoeba castellanii str. Neff	14917532
ACA1_383450	CDS	ACA1_383450	NW_004457434.1	168483	170623	R	encoded by transcript ACA1_383450A; G protein coupled receptor, putative	complement(join(168483..168645,168723..168900,168994..169095,169201..169364,169445..169515,169613..169688,169788..169927,170008..170122,170195..170364,170432..170623))	Acanthamoeba castellanii str. Neff	14917533
ACA1_383460	CDS	ACA1_383460	NW_004457434.1	170770	171364	R	encoded by transcript ACA1_383460A; uncharacterized protein	complement(join(170770..170948,171020..171110,171200..171364))	Acanthamoeba castellanii str. Neff	14917534
ACA1_383470	CDS	ACA1_383470	NW_004457434.1	171976	178664	D	encoded by transcript ACA1_383470A; Ankyrin repeatcontaining protein	join(171976..172302,172387..172713,172734..172756,172850..172976,173082..173230,173308..173368,173444..173527,173607..173784,173894..174226,174424..174567,174645..175421,175495..175613,175722..175886,175957..176203,176275..176402,176508..177108,177207..177334,177429..177553,177626..177723,177829..178223,178266..178664)	Acanthamoeba castellanii str. Neff	14917535
ACA1_383480	CDS	ACA1_383480	NW_004457434.1	179042	179432	D	encoded by transcript ACA1_383480A; uncharacterized protein	join(179042..179054,179152..179432)	Acanthamoeba castellanii str. Neff	14917536
ACA1_383490	CDS	ACA1_383490	NW_004457434.1	179566	184867	R	encoded by transcript ACA1_383490A; ATPdependent protease La, putative	complement(join(179566..179669,179784..179996,180143..180634,180725..181082,181192..181320,181405..181500,181611..181738,181818..181919,182043..182195,182322..182414,182496..182622,182702..182811,182881..182938,183050..183154,183234..183383,183473..183556,183658..183857,183947..184075,184176..184247,184364..184666,184840..184867))	Acanthamoeba castellanii str. Neff	14917537
ACA1_383500	CDS	ACA1_383500	NW_004457434.1	185138	186497	D	encoded by transcript ACA1_383500A; uncharacterized protein	join(<185138..185765,185855..186070,186131..186259,186328..186497)	Acanthamoeba castellanii str. Neff	14917538
ACA1_383510	CDS	ACA1_383510	NW_004457434.1	186536	187304	R	encoded by transcript ACA1_383510A; acetyltransferase, GNAT superfamily protein	complement(join(186536..186659,186723..186875,186968..187026,187116..187304))	Acanthamoeba castellanii str. Neff	14917539
ACA1_383520	CDS	ACA1_383520	NW_004457434.1	187563	188063	R	encoded by transcript ACA1_383520A; uncharacterized protein	complement(join(187563..187943,188001..188063))	Acanthamoeba castellanii str. Neff	14917540
ACA1_383540	CDS	ACA1_383540	NW_004457434.1	205419	206341	R	encoded by transcript ACA1_383540A; uncharacterized protein	complement(join(205419..205564,205630..205687,205749..205823,205892..206341))	Acanthamoeba castellanii str. Neff	14917542
ACA1_383560	CDS	ACA1_383560	NW_004457434.1	207744	212462	R	encoded by transcript ACA1_383560A; TBC domain containing protein	complement(join(207744..207991,208013..208200,208272..208395,208462..209301,209503..209730,209810..209951,210050..210250,210321..210392,210481..210580,210671..210795,210876..210981,211062..211194,211271..211354,211422..211551,211638..212462))	Acanthamoeba castellanii str. Neff	14917544
ACA1_383570	CDS	ACA1_383570	NW_004457434.1	212595	212918	D	encoded by transcript ACA1_383570A; uncharacterized protein	212595..212918	Acanthamoeba castellanii str. Neff	14917545
ACA1_383580	CDS	ACA1_383580	NW_004457434.1	213106	215535	R	encoded by transcript ACA1_383580A; sulfate adenylyltransferase	complement(join(213106..213801,213838..213941,214121..214315,214517..214687,214751..214879,214965..215085,215169..215244,215318..215535))	Acanthamoeba castellanii str. Neff	14917546
ACA1_383590	CDS	ACA1_383590	NW_004457434.1	216408	221066	R	encoded by transcript ACA1_383590A; uncharacterized protein	complement(join(216408..217080,217156..217288,217372..217623,217932..218007,218089..218190,218259..218490,218596..219075,219112..219235,219332..219409,219495..219708,219796..219887,219958..220025,220126..220230,220312..220424,220515..221066))	Acanthamoeba castellanii str. Neff	14917547
ACA1_383600	CDS	ACA1_383600	NW_004457434.1	222805	225345	R	encoded by transcript ACA1_383600A; uncharacterized protein	complement(join(222805..223030,223103..223128,223146..223182,223276..223370,223758..223901,223977..224186,224281..224385,224461..224601,224771..224914,225002..225085,225154..225345))	Acanthamoeba castellanii str. Neff	14917548
ACA1_383610	CDS	ACA1_383610	NW_004457434.1	225791	228486	D	encoded by transcript ACA1_383610A; PAKA subfamily protein kinase	join(225791..225841,225930..225990,226088..226164,226242..226374,226466..226599,226736..226862,226942..227004,227077..227140,227211..227394,227453..227560,227646..227745,227828..227910,227980..228093,228168..228305,228409..228486)	Acanthamoeba castellanii str. Neff	14917549
ACA1_383620	CDS	ACA1_383620	NW_004457434.1	228756	233391	D	encoded by transcript ACA1_383620A; leucine rich repeat domain containing protein	join(228756..228813,228920..229014,229112..229201,229281..229337,229427..229501,229560..229621,229718..229789,229857..229921,230001..230133,230207..230291,230374..230445,230518..230655,230730..230788,230855..230955,231034..231149,231364..231433,231515..231585,231662..231757,232162..232245,232314..232398,232490..232578,232654..232719,232810..232918,233018..233064,233170..233391)	Acanthamoeba castellanii str. Neff	14917453
ACA1_383630	CDS	ACA1_383630	NW_004457434.1	233644	235422	D	encoded by transcript ACA1_383630A; peptidylprolyl cis-trans isomerase, FKBP-type domain containing protein	join(233644..233752,233852..234073,234173..234405,234485..234733,234852..235001,235150..235263,235342..235422)	Acanthamoeba castellanii str. Neff	14917454
ACA1_383640	CDS	ACA1_383640	NW_004457434.1	235638	238770	R	encoded by transcript ACA1_383640A; peptidase S9, prolyl oligopeptidase	complement(join(235638..235723,235801..236014,236122..236292,236396..236586,236674..237002,237077..237352,237449..237549,237651..237726,237808..238005,238181..238282,238381..238464,238547..238770))	Acanthamoeba castellanii str. Neff	14917455
ACA1_383650	CDS	ACA1_383650	NW_004457434.1	238810	239229	D	encoded by transcript ACA1_383650A; uncharacterized protein	238810..239229	Acanthamoeba castellanii str. Neff	14917456
ACA1_383660	CDS	ACA1_383660	NW_004457434.1	239373	241286	D	encoded by transcript ACA1_383660A; WD repeat protein WDR4, putative	join(239373..239409,239653..239758,239836..239911,240003..240089,240201..240313,240398..240604,240677..240864,240940..241286)	Acanthamoeba castellanii str. Neff	14917457
ACA1_383670	CDS	ACA1_383670	NW_004457434.1	241354	242703	R	encoded by transcript ACA1_383670A; archease family protein	complement(join(241354..241434,241536..241720,241837..241947,242121..242206,242421..242480,242657..242703))	Acanthamoeba castellanii str. Neff	14917458
ACA1_383680	CDS	ACA1_383680	NW_004457434.1	243243	244290	R	encoded by transcript ACA1_383680A; uncharacterized protein	complement(join(243243..244198,244248..244290))	Acanthamoeba castellanii str. Neff	14917459
ACA1_383690	CDS	ACA1_383690	NW_004457434.1	245487	246457	R	encoded by transcript ACA1_383690A; ubiquinone/menaquinone biosynthesis methyltransferaselike protein	complement(join(245487..245687,245804..245905,245971..246125,246195..246314,246391..246457))	Acanthamoeba castellanii str. Neff	14917460
ACA1_383700	CDS	ACA1_383700	NW_004457434.1	246710	249513	D	encoded by transcript ACA1_383700A; endonuclease/exonuclease/phosphatase family protein	join(246710..246889,246977..247054,247128..247382,247484..247540,247653..247820,247889..247951,248072..248173,248274..248498,248515..248587,248655..248783,248875..248954,249055..249139,249218..249344,249417..249513)	Acanthamoeba castellanii str. Neff	14917461
ACA1_383710	CDS	ACA1_383710	NW_004457434.1	249834	252460	D	encoded by transcript ACA1_383710A; glucose6-phosphate dehydrogenase, C-terminal domain containing protein	join(249834..249911,249984..250062,250150..250297,250362..250506,250594..250680,250762..250884,250966..251073,251156..251305,251370..251465,251535..251646,251740..251804,251886..252045,252132..252253,252335..252460)	Acanthamoeba castellanii str. Neff	14917462
ACA1_383720	CDS	ACA1_383720	NW_004457434.1	253029	254738	D	encoded by transcript ACA1_383720A; 23S rRNA methyltransferase, putative	join(253029..253179,253256..253356,253467..253727,253839..254001,254090..254123,254206..254320,254407..254486,254567..254682,254728..254738)	Acanthamoeba castellanii str. Neff	14917463
ACA1_383730	CDS	ACA1_383730	NW_004457434.1	255360	256504	R	encoded by transcript ACA1_383730A; uncharacterized protein	complement(join(255360..255577,255677..255741,255811..255994,256090..256228,256403..>256504))	Acanthamoeba castellanii str. Neff	14917464
ACA1_383740	CDS	ACA1_383740	NW_004457434.1	256721	257782	D	encoded by transcript ACA1_383740A; GTPbinding protein YPTC5, putative	join(256721..256785,256862..256932,257071..257139,257224..257403,257491..257583,257667..257782)	Acanthamoeba castellanii str. Neff	14917465
ACA1_383750	CDS	ACA1_383750	NW_004457434.1	258265	262173	D	encoded by transcript ACA1_383750A; Ubiquitinconjugating enzyme subfamily protein	join(258265..258381,258436..258612,258683..258793,258885..258969,259045..259100,259179..260300,260451..260502,260543..260878,260966..261119,261196..261349,261408..261546,261636..261875,261959..262173)	Acanthamoeba castellanii str. Neff	14917466
ACA1_383770	CDS	ACA1_383770	NW_004457434.1	274235	277023	D	encoded by transcript ACA1_383770A; uncharacterized protein	join(274235..275638,275749..276231,276246..276664,276705..276885,276925..277023)	Acanthamoeba castellanii str. Neff	14917468
ACA1_383780	CDS	ACA1_383780	NW_004457434.1	277117	279266	D	encoded by transcript ACA1_383780A; imidazolonepropionase	join(277117..277209,277278..277428,277509..277606,277686..277749,277836..277942,278038..278172,278270..278403,278445..278571,278701..278818,278889..279026,279112..279266)	Acanthamoeba castellanii str. Neff	14917469
ACA1_383790	CDS	ACA1_383790	NW_004457434.1	279701	283135	D	encoded by transcript ACA1_383790A; protein kinase domain containing protein	join(279701..280038,280068..280133,280370..280442,280478..280635,280739..280957,281168..281174,281273..281376,281452..281578,281673..281787,281863..282069,282191..282302,282387..282542,282634..283135)	Acanthamoeba castellanii str. Neff	14917470
ACA1_383800	CDS	ACA1_383800	NW_004457434.1	283209	285089	R	encoded by transcript ACA1_383800A; diacylglycerol kinase catalytic domain containing protein	complement(join(283209..283358,283661..283844,283918..284100,284245..284384,284478..284592,284656..285089))	Acanthamoeba castellanii str. Neff	14917506
ACA1_120250	CDS	ACA1_120250	NW_004457433.1	11959	12783	D	encoded by transcript ACA1_120250A; doublecortin protein	join(11959..11997,12067..12161,12266..12287,12386..12446,12532..12624,12746..12783)	Acanthamoeba castellanii str. Neff	14917451
ACA1_120360	CDS	ACA1_120360	NW_004457433.1	13047	14101	R	encoded by transcript ACA1_120360A; uncharacterized protein	complement(join(13047..13200,13279..13330,13415..13519,13626..13682,13784..13919,14039..>14101))	Acanthamoeba castellanii str. Neff	14917452
ACA1_019960	CDS	ACA1_019960	NW_004457432.1	150	3084	D	encoded by transcript ACA1_019960A; SWIRM domain containing protein	join(<150..219,299..384,460..617,698..815,921..1032,1100..1155,1242..1313,1387..1459,1556..1656,1774..1900,2008..2110,2214..2309,2399..2472,2633..2724,2810..2900,3002..3084)	Acanthamoeba castellanii str. Neff	14917447
ACA1_019980	CDS	ACA1_019980	NW_004457432.1	5468	6135	R	encoded by transcript ACA1_019980A; uncharacterized protein	complement(join(5468..5953,6037..6135))	Acanthamoeba castellanii str. Neff	14917449
ACA1_019990	CDS	ACA1_019990	NW_004457432.1	7835	10797	D	encoded by transcript ACA1_019990A; uncharacterized protein	join(7835..8013,8184..8229,8284..8398,8476..8555,8618..8717,8788..8993,9061..9123,9202..9285,9372..9447,9514..9584,9655..9765,9834..9915,9983..10044,10106..10150,10222..10309,10410..10441,10553..10606,10681..10797)	Acanthamoeba castellanii str. Neff	14917450
ACA1_087290	CDS	ACA1_087290	NW_004457431.1	808	1047	R	encoded by transcript ACA1_087290A; uncharacterized protein	complement(808..1047)	Acanthamoeba castellanii str. Neff	14917313
ACA1_087300	CDS	ACA1_087300	NW_004457431.1	2052	5076	D	encoded by transcript ACA1_087300A; cellulase, putative	join(2052..2091,2186..2406,2515..2784,2866..2972,3040..3156,3187..3307,3377..3970,4091..4360,4425..4534,4601..4714,4780..4861,4939..5076)	Acanthamoeba castellanii str. Neff	14917408
ACA1_087310	CDS	ACA1_087310	NW_004457431.1	5828	6429	R	encoded by transcript ACA1_087310A; Ras subfamily protein	complement(join(5828..6071,6180..6269,6332..6429))	Acanthamoeba castellanii str. Neff	14917409
ACA1_087320	CDS	ACA1_087320	NW_004457431.1	7775	9405	R	encoded by transcript ACA1_087320A; uncharacterized protein	complement(join(7775..8554,8633..8893,8974..9405))	Acanthamoeba castellanii str. Neff	14917402
ACA1_087330	CDS	ACA1_087330	NW_004457431.1	9921	10160	D	encoded by transcript ACA1_087330A; uncharacterized protein	9921..10160	Acanthamoeba castellanii str. Neff	14917403
ACA1_087340	CDS	ACA1_087340	NW_004457431.1	10724	11350	D	encoded by transcript ACA1_087340A; uncharacterized protein	10724..11350	Acanthamoeba castellanii str. Neff	14917404
ACA1_087350	CDS	ACA1_087350	NW_004457431.1	11513	13560	D	encoded by transcript ACA1_087350A; protein prenyltransferase, putative	join(11513..11655,11771..11987,12084..12211,12293..12401,12532..12629,12708..12801,12895..13007,13092..13560)	Acanthamoeba castellanii str. Neff	14917405
ACA1_087360	CDS	ACA1_087360	NW_004457431.1	14439	18226	D	encoded by transcript ACA1_087360A; MIF4G domain containing protein	join(14439..14538,14697..14812,14902..15298,15413..15862,15980..16135,16214..16342,16416..16495,16572..16698,16773..17022,17123..17504,17610..17810,17924..18226)	Acanthamoeba castellanii str. Neff	14917406
ACA1_087370	CDS	ACA1_087370	NW_004457431.1	18418	19102	D	encoded by transcript ACA1_087370A; uncharacterized protein	join(18418..18503,18600..18738,18806..19102)	Acanthamoeba castellanii str. Neff	14917407
ACA1_087380	CDS	ACA1_087380	NW_004457431.1	19337	21598	D	encoded by transcript ACA1_087380A; Ras subfamily protein	join(19337..19491,19569..19719,19770..19880,19950..20070,20114..20343,20456..20518,20617..20705,20763..20819,21057..21177,21297..21445,21505..21598)	Acanthamoeba castellanii str. Neff	14917262
ACA1_087390	CDS	ACA1_087390	NW_004457431.1	22065	23389	D	encoded by transcript ACA1_087390A; ankyrin repeat-containing protein	join(22065..22234,22346..22496,22611..22700,22781..22901,22968..23164,23252..23389)	Acanthamoeba castellanii str. Neff	14917263
ACA1_087400	CDS	ACA1_087400	NW_004457431.1	23580	24736	D	encoded by transcript ACA1_087400A; Ras subfamily protein	join(23580..23608,23694..23774,23903..24026,24115..24257,24322..24414,24481..24736)	Acanthamoeba castellanii str. Neff	14917264
ACA1_087410	CDS	ACA1_087410	NW_004457431.1	25149	25790	D	encoded by transcript ACA1_087410A; ankyrin repeat-containing protein	join(25149..25232,25451..25576,25701..25790)	Acanthamoeba castellanii str. Neff	14917265
ACA1_087420	CDS	ACA1_087420	NW_004457431.1	25883	27897	D	encoded by transcript ACA1_087420A; Ras family protein	join(25883..25988,26059..26255,26365..26427,26499..26581,26737..26793,26862..26942,27026..27149,27239..27387,27463..27555,27645..27897)	Acanthamoeba castellanii str. Neff	14917266
ACA1_087430	CDS	ACA1_087430	NW_004457431.1	28071	28295	R	encoded by transcript ACA1_087430A; uncharacterized protein	complement(join(28071..28219,28232..28295))	Acanthamoeba castellanii str. Neff	14917267
ACA1_087440	CDS	ACA1_087440	NW_004457431.1	28975	30031	D	encoded by transcript ACA1_087440A; cysteine proteinase	join(28975..29386,29451..30031)	Acanthamoeba castellanii str. Neff	14917268
ACA1_087450	CDS	ACA1_087450	NW_004457431.1	31117	33601	R	encoded by transcript ACA1_087450A; Ras subfamily protein	complement(join(31117..31372,31443..31535,31607..31755,31813..31936,32040..32138,32342..32430,32502..32564,32637..32854,32900..33020,33116..33157,33169..33364,33441..33601))	Acanthamoeba castellanii str. Neff	14917269
ACA1_087460	CDS	ACA1_087460	NW_004457431.1	33824	35195	R	encoded by transcript ACA1_087460A; peptidase	complement(join(33824..34805,34883..35048,35126..35195))	Acanthamoeba castellanii str. Neff	14917270
ACA1_087470	CDS	ACA1_087470	NW_004457431.1	35723	36921	R	encoded by transcript ACA1_087470A; uncharacterized protein	complement(join(35723..36073,36205..36293,36397..36482,36593..36921))	Acanthamoeba castellanii str. Neff	14917271
ACA1_087480	CDS	ACA1_087480	NW_004457431.1	37288	38574	R	encoded by transcript ACA1_087480A; transcription factor iia, alpha/beta subunit protein	complement(join(37288..37395,37491..37595,37673..37849,37945..38208,38461..38574))	Acanthamoeba castellanii str. Neff	14917352
ACA1_087490	CDS	ACA1_087490	NW_004457431.1	39101	40183	D	encoded by transcript ACA1_087490A; uncharacterized protein	39101..40183	Acanthamoeba castellanii str. Neff	14917353
ACA1_087500	CDS	ACA1_087500	NW_004457431.1	40643	44659	D	encoded by transcript ACA1_087500A; peroxidase	join(40643..40826,41073..41118,41181..41236,41305..41385,41470..41556,41653..41800,41880..41985,42114..42215,42338..42432,42568..42656,42733..42809,42891..42970,43062..43163,43290..43382,43466..43562,43692..43761,43864..43919,44028..44114,44264..44367,44479..44659)	Acanthamoeba castellanii str. Neff	14917354
ACA1_087510	CDS	ACA1_087510	NW_004457431.1	44728	48071	D	encoded by transcript ACA1_087510A; protein kinase domain containing protein	join(44728..44909,45010..45200,45363..45640,45787..45957,46056..46230,46370..46478,46580..46786,46906..47010,47086..47221,47362..47498,47574..47826,47913..48071)	Acanthamoeba castellanii str. Neff	14917355
ACA1_087520	CDS	ACA1_087520	NW_004457431.1	48221	50797	R	encoded by transcript ACA1_087520A; diacylglycerol kinase	complement(join(48221..48306,48450..48714,48809..48953,49070..49173,49310..49414,49498..49682,49787..49875,49980..50073,50219..50294,50394..50469,50586..50797))	Acanthamoeba castellanii str. Neff	14917356
ACA1_087530	CDS	ACA1_087530	NW_004457431.1	51052	53029	D	encoded by transcript ACA1_087530A; protein tssc1, putative	join(51052..51108,51208..51291,51403..51486,51610..51673,51769..51859,51951..52081,52165..52270,52355..52468,52570..52773,52852..53029)	Acanthamoeba castellanii str. Neff	14917357
ACA1_087540	CDS	ACA1_087540	NW_004457431.1	53469	54494	D	encoded by transcript ACA1_087540A; Hypothetical protein	join(53469..53828,53839..54252,54396..54494)	Acanthamoeba castellanii str. Neff	14917358
ACA1_087550	CDS	ACA1_087550	NW_004457431.1	54633	56710	D	encoded by transcript ACA1_087550A; uncharacterized protein	join(54633..54751,54852..54996,55094..55218,55298..55537,55708..55842,56017..56390,56475..56710)	Acanthamoeba castellanii str. Neff	14917359
ACA1_087560	CDS	ACA1_087560	NW_004457431.1	56977	57885	R	encoded by transcript ACA1_087560A; transloconassociated protein subunit beta, putative	complement(join(56977..57105,57208..57238,57322..57486,57554..57649,57731..57885))	Acanthamoeba castellanii str. Neff	14917360
ACA1_087570	CDS	ACA1_087570	NW_004457431.1	58132	63210	R	encoded by transcript ACA1_087570A; uncharacterized protein	complement(join(58132..61533,61620..61796,61870..61985,62105..62204,62348..62488,62560..62830,62903..63210))	Acanthamoeba castellanii str. Neff	14917361
ACA1_087580	CDS	ACA1_087580	NW_004457431.1	63473	63816	R	encoded by transcript ACA1_087580A; small conserved protein	complement(join(63473..63580,63685..63816))	Acanthamoeba castellanii str. Neff	14917362
ACA1_087600	CDS	ACA1_087600	NW_004457431.1	66599	68093	R	encoded by transcript ACA1_087600A; 3deoxy-7-phosphoheptulonate synthase	complement(join(66599..66838,66925..67220,67299..67461,67561..67742,67841..68093))	Acanthamoeba castellanii str. Neff	14917364
ACA1_087610	CDS	ACA1_087610	NW_004457431.1	69222	78090	D	encoded by transcript ACA1_087610A; phospholipase D, putative	join(69222..69378,69463..69574,69713..69974,70115..70650,70779..70965,71052..71144,71253..71391,71485..71563,71646..71778,71897..72061,72140..72298,72492..72600,72683..72763,72885..73063,73170..73211,73305..73418,73615..73807,73943..74040,74126..74221,74383..74517,74715..74964,75067..75975,76107..76192,76305..76406,76481..76551,76626..76687,76811..76917,77047..77219,77334..77511,77632..78090)	Acanthamoeba castellanii str. Neff	14917365
ACA1_087620	CDS	ACA1_087620	NW_004457431.1	78845	80647	R	encoded by transcript ACA1_087620A; bZIP transcription factor domain containing protein	complement(join(78845..79053,79150..79372,79487..79771,79859..80647))	Acanthamoeba castellanii str. Neff	14917366
ACA1_087630	CDS	ACA1_087630	NW_004457431.1	81137	84007	R	encoded by transcript ACA1_087630A; uncharacterized protein	complement(join(81137..81567,81686..81821,81907..82066,82127..82256,82332..82431,82504..82651,82788..82916,83002..83081,83156..83257,83333..83512,83602..83740,83833..83977,84001..84007))	Acanthamoeba castellanii str. Neff	14917368
ACA1_087640	CDS	ACA1_087640	NW_004457431.1	84052	88537	R	encoded by transcript ACA1_087640A; uncharacterized protein	complement(join(<84052..84215,84292..84497,84580..84674,84799..84982,85087..85208,85301..85454,85506..85609,85683..85794,85916..85997,86065..86121,86190..86253,86325..86467,86532..86622,86693..86918,86958..87101,87185..87351,87413..87566,87637..87696,87767..87836,87904..88254,88363..88537))	Acanthamoeba castellanii str. Neff	14917369
ACA1_087650	CDS	ACA1_087650	NW_004457431.1	89196	92927	R	encoded by transcript ACA1_087650A; cullin family protein	complement(join(89196..89327,89420..89689,89764..90092,90219..90336,90483..90740,90832..90910,90998..91158,91201..91370,91480..91639,91768..91907,92014..92155,92262..92321,92401..92505,92581..92683,92869..92927))	Acanthamoeba castellanii str. Neff	14917370
ACA1_087660	CDS	ACA1_087660	NW_004457431.1	93352	93843	D	encoded by transcript ACA1_087660A; zinc finger, C3HC4 type (RING finger) domain containing protein	join(93352..93476,93543..93661,93731..93843)	Acanthamoeba castellanii str. Neff	14917371
ACA1_087670	CDS	ACA1_087670	NW_004457431.1	94037	95834	R	encoded by transcript ACA1_087670A; peptidase M16 family protein	complement(join(94037..95209,95306..95554,95748..95834))	Acanthamoeba castellanii str. Neff	14917372
ACA1_087680	CDS	ACA1_087680	NW_004457431.1	96149	98509	R	encoded by transcript ACA1_087680A; uncharacterized protein	complement(join(96149..96882,96969..97387,97463..97515,97592..97674,97780..98027,98109..98509))	Acanthamoeba castellanii str. Neff	14917373
ACA1_087700	CDS	ACA1_087700	NW_004457431.1	101377	101790	D	encoded by transcript ACA1_087700A; uncharacterized protein	101377..101790	Acanthamoeba castellanii str. Neff	14917375
ACA1_087710	CDS	ACA1_087710	NW_004457431.1	102650	104829	D	encoded by transcript ACA1_087710A; ICElike protease (caspase) p20 domain containing protein	join(102650..102786,102872..103242,103304..103380,103469..103622,103705..103818,103891..103978,104008..104246,104320..104447,104517..104645,104707..104829)	Acanthamoeba castellanii str. Neff	14917376
ACA1_087720	CDS	ACA1_087720	NW_004457431.1	104975	106510	D	encoded by transcript ACA1_087720A; dihydrodipicolinate synthetase	join(104975..105062,105148..105307,105396..105480,105585..105672,105744..105815,105882..105938,106021..106262,106376..106510)	Acanthamoeba castellanii str. Neff	14917377
ACA1_087730	CDS	ACA1_087730	NW_004457431.1	107137	110882	D	encoded by transcript ACA1_087730A; Armadillo/betacatenin-like repeat domain containing protein	join(107137..107290,107377..107441,107520..107725,107829..107941,108033..108169,108237..108345,108478..108624,108706..108846,108938..109069,109190..109257,109331..109385,109479..109604,109703..109825,109927..110049,110147..110278,110350..110415,110500..110640,110724..110748,110837..110882)	Acanthamoeba castellanii str. Neff	14917378
ACA1_087850	CDS	ACA1_087850	NW_004457431.1	114238	114463	R	encoded by transcript ACA1_087850A; uncharacterized protein	complement(<114238..114463)	Acanthamoeba castellanii str. Neff	14917380
ACA1_087860	CDS	ACA1_087860	NW_004457431.1	114692	118413	D	encoded by transcript ACA1_087860A; tetratricopeptide repeat domain containing protein	join(114692..114789,114928..115059,115251..115410,115510..115888,115982..116059,116141..116289,116371..116585,116695..117150,117273..117385,117461..117627,117730..117971,118057..118205,118292..118413)	Acanthamoeba castellanii str. Neff	14917381
ACA1_087870	CDS	ACA1_087870	NW_004457431.1	118473	121216	R	encoded by transcript ACA1_087870A; Tripeptidylpeptidase 1, putative	complement(join(118473..118679,118746..118892,119014..119165,119312..119419,119547..119651,119749..120013,120115..120236,120339..120415,120543..120678,120759..120886,121071..121216))	Acanthamoeba castellanii str. Neff	14917382
ACA1_087880	CDS	ACA1_087880	NW_004457431.1	121681	124278	R	encoded by transcript ACA1_087880A; betaamylase	complement(join(121681..121759,121856..121973,122061..122199,122298..122491,122601..122690,122773..122870,122958..123015,123098..123295,123382..123459,123549..123679,123813..123912,124185..124278))	Acanthamoeba castellanii str. Neff	14917383
ACA1_087890	CDS	ACA1_087890	NW_004457431.1	124508	125437	R	encoded by transcript ACA1_087890A; uncharacterized protein	complement(join(124508..124742,124857..125437))	Acanthamoeba castellanii str. Neff	14917314
ACA1_087900	CDS	ACA1_087900	NW_004457431.1	125437	128338	R	encoded by transcript ACA1_087900A; uncharacterized protein	complement(join(125437..125779,126006..126080,126177..126250,126338..126952,127039..127188,127307..127387,127465..127577,127669..127747,127856..128338))	Acanthamoeba castellanii str. Neff	14917315
ACA1_087910	CDS	ACA1_087910	NW_004457431.1	128465	129656	D	encoded by transcript ACA1_087910A; uncharacterized protein	join(128465..128486,128696..128810,128957..129099,129205..129656)	Acanthamoeba castellanii str. Neff	14917316
ACA1_087920	CDS	ACA1_087920	NW_004457431.1	129818	130968	D	encoded by transcript ACA1_087920A; uncharacterized protein	join(129818..130233,130307..130416,130505..130968)	Acanthamoeba castellanii str. Neff	14917317
ACA1_087930	CDS	ACA1_087930	NW_004457431.1	131035	136124	R	encoded by transcript ACA1_087930A; RhoGEF domain containing protein	complement(join(131035..131109,131179..131250,131322..132598,132691..132907,132977..133147,133222..133317,133383..133490,133554..133733,133797..133927,134030..134205,134277..134532,134598..134945,135017..135198,135276..135424,135506..135612,135680..136124))	Acanthamoeba castellanii str. Neff	14917318
ACA1_087940	CDS	ACA1_087940	NW_004457431.1	136704	138608	D	encoded by transcript ACA1_087940A; Ser/Thr phosphatase family superfamily protein	join(136704..136805,136873..137047,137108..137195,137260..137363,137432..137571,137629..137803,137870..138068,138168..138283,138343..138453,138517..138608)	Acanthamoeba castellanii str. Neff	14917319
ACA1_087950	CDS	ACA1_087950	NW_004457431.1	138882	140307	D	encoded by transcript ACA1_087950A; tRNAHis guanylyltransferase family protein	join(138882..138939,139047..139112,139191..139384,139474..139566,139651..139728,139842..140095,140175..140307)	Acanthamoeba castellanii str. Neff	14917320
ACA1_087960	CDS	ACA1_087960	NW_004457431.1	140754	144527	D	encoded by transcript ACA1_087960A; RhoGAP domain containing protein	join(140754..140822,140972..141044,141205..141335,141456..141527,141597..141725,141816..142115,142341..142494,142551..142648,142722..142833,142902..143041,143121..143249,143330..143483,143983..144351,144442..144527)	Acanthamoeba castellanii str. Neff	14917321
ACA1_087970	CDS	ACA1_087970	NW_004457431.1	144931	151885	D	encoded by transcript ACA1_087970A; NACHT domain containing protein	join(144931..145044,145120..145290,145369..145539,145617..145729,145854..145967,145995..146093,146176..146281,146365..146487,146571..146642,146711..146845,146924..147179,147259..147390,147464..147564,147769..148104,148180..148333,148432..148550,148646..148808,148896..148948,148973..149241,149330..149415,149481..149767,149859..150061,150154..150324,150435..150683,150770..150914,150988..151367,151506..151728,151802..151885)	Acanthamoeba castellanii str. Neff	14917322
ACA1_088080	CDS	ACA1_088080	NW_004457431.1	152043	152786	D	encoded by transcript ACA1_088080A; uncharacterized protein	join(152043..152101,152177..152786)	Acanthamoeba castellanii str. Neff	14917323
ACA1_088090	CDS	ACA1_088090	NW_004457431.1	156540	157317	R	encoded by transcript ACA1_088090A; retinol dehydrogenase 14 (all-trans and 9-cis) family protein	complement(join(156540..156656,156715..156806,156867..157001,157126..157242,157314..157317))	Acanthamoeba castellanii str. Neff	14917324
ACA1_088200	CDS	ACA1_088200	NW_004457431.1	157765	158247	D	encoded by transcript ACA1_088200A; uncharacterized protein	join(157765..157953,157990..158247)	Acanthamoeba castellanii str. Neff	14917325
ACA1_088210	CDS	ACA1_088210	NW_004457431.1	159125	160728	R	encoded by transcript ACA1_088210A; lightdependent protochlorophyllide reductase, putative	complement(join(159125..159241,159314..159405,159466..159600,159708..159824,159897..159972,160047..160226,160325..160443,160533..160601,160656..160728))	Acanthamoeba castellanii str. Neff	14917326
ACA1_088220	CDS	ACA1_088220	NW_004457431.1	161128	162795	R	encoded by transcript ACA1_088220A; PQQ enzyme repeat domain containing protein	complement(161128..162795)	Acanthamoeba castellanii str. Neff	14917327
ACA1_088330	CDS	ACA1_088330	NW_004457431.1	163194	163878	D	encoded by transcript ACA1_088330A; uncharacterized protein	join(163194..163485,163592..163878)	Acanthamoeba castellanii str. Neff	14917328
ACA1_088340	CDS	ACA1_088340	NW_004457431.1	163962	164874	R	encoded by transcript ACA1_088340A; shortchain dehydrogenase/reductase SDR, putative	complement(join(163962..163988,164185..164364,164461..164579,164679..164747,164802..164874))	Acanthamoeba castellanii str. Neff	14917329
ACA1_088450	CDS	ACA1_088450	NW_004457431.1	165832	166677	R	encoded by transcript ACA1_088450A; uncharacterized protein	complement(join(165832..166137,166408..166677))	Acanthamoeba castellanii str. Neff	14917330
ACA1_088560	CDS	ACA1_088560	NW_004457431.1	166897	167284	R	encoded by transcript ACA1_088560A; uncharacterized protein	complement(join(166897..166902,166976..167284))	Acanthamoeba castellanii str. Neff	14917331
ACA1_088570	CDS	ACA1_088570	NW_004457431.1	167670	168335	R	encoded by transcript ACA1_088570A; DUF614 family protein	complement(join(167670..167811,167972..168110,168293..168335))	Acanthamoeba castellanii str. Neff	14917332
ACA1_088580	CDS	ACA1_088580	NW_004457431.1	168980	171690	D	encoded by transcript ACA1_088580A; uncharacterized protein	join(168980..169109,169222..169256,169362..169533,169607..169708,169793..169966,170041..170131,170209..170286,170372..170522,170678..170758,170889..171278,171372..171482,171559..171690)	Acanthamoeba castellanii str. Neff	14917296
ACA1_088590	CDS	ACA1_088590	NW_004457431.1	171947	175241	D	encoded by transcript ACA1_088590A; scavenger mrna decapping enzyme (dcps) protein	join(171947..172085,172350..172450,172622..172746,172853..172965,173196..173341,173513..173749,174032..174107,174204..174338,174442..174562,174623..174826,175016..175241)	Acanthamoeba castellanii str. Neff	14917297
ACA1_088600	CDS	ACA1_088600	NW_004457431.1	175363	176850	R	encoded by transcript ACA1_088600A; uncharacterized protein	complement(join(175363..175536,175625..175764,175861..176413,176602..176850))	Acanthamoeba castellanii str. Neff	14917298
ACA1_088610	CDS	ACA1_088610	NW_004457431.1	177929	182619	D	encoded by transcript ACA1_088610A; RhoGAP domain containing protein	join(177929..178083,178153..178246,178291..178546,178665..178808,178933..179039,179113..179241,179361..179478,179584..179678,179768..179921,180026..180232,180312..180418,180534..180842,180969..181061,181173..181703,181794..182020,182141..182397,182489..182619)	Acanthamoeba castellanii str. Neff	14917299
ACA1_088620	CDS	ACA1_088620	NW_004457431.1	182770	183831	R	encoded by transcript ACA1_088620A; aldo/keto reductase family oxidoreductase	complement(join(182770..182938,183015..183184,183283..183831))	Acanthamoeba castellanii str. Neff	14917300
ACA1_088630	CDS	ACA1_088630	NW_004457431.1	183993	186120	R	encoded by transcript ACA1_088630A; surfeit locus protein 6 protein	complement(join(183993..184167,184259..184446,184542..185567,185754..185831,185920..185987,186087..186120))	Acanthamoeba castellanii str. Neff	14917301
ACA1_088640	CDS	ACA1_088640	NW_004457431.1	186248	188338	D	encoded by transcript ACA1_088640A; ATP binding protein, putative	join(186248..186339,186427..186471,186554..186633,186727..186798,186948..187048,187490..187646,187752..187912,188006..188338)	Acanthamoeba castellanii str. Neff	14917302
ACA1_088650	CDS	ACA1_088650	NW_004457431.1	188417	193398	R	encoded by transcript ACA1_088650A; Myotubularinrelated protein	complement(join(188417..188520,188618..188692,188769..188873,188942..189131,189319..189445,189512..189629,189728..189820,189963..190086,190176..190254,190317..190842,190943..191021,191162..191266,191343..191481,191620..191798,191911..191995,192088..192191,192324..192392,192480..192603,192702..192814,192898..193398))	Acanthamoeba castellanii str. Neff	14917303
ACA1_088660	CDS	ACA1_088660	NW_004457431.1	193584	199162	R	encoded by transcript ACA1_088660A; RhoGEF domain containing protein	complement(join(193584..195549,195645..197418,197508..197664,197742..197804,197901..197999,198238..198345,198456..198534,198659..198771,198882..198970,199045..199162))	Acanthamoeba castellanii str. Neff	14917304
ACA1_088670	CDS	ACA1_088670	NW_004457431.1	199656	200381	R	encoded by transcript ACA1_088670A; 60S ribosomal protein L36, putative	complement(join(199656..199766,199868..200002,200166..200381))	Acanthamoeba castellanii str. Neff	14917305
ACA1_088680	CDS	ACA1_088680	NW_004457431.1	200682	202042	D	encoded by transcript ACA1_088680A; oxidoreductase, 2OGFe(II) oxygenase family protein	join(200682..200718,200800..201123,201192..201264,201347..201466,201529..201626,201704..201875,201961..202042)	Acanthamoeba castellanii str. Neff	14917306
ACA1_088690	CDS	ACA1_088690	NW_004457431.1	202124	206758	R	encoded by transcript ACA1_088690A; RhoGEF domain containing protein	complement(join(202124..202593,202806..203078,203182..203384,203513..203643,203722..204018,204105..204219,204356..204393,204511..204767,204835..204957,205060..205206,205288..205413,205492..205617,205691..205825,205930..206174,206428..206530,206662..206758))	Acanthamoeba castellanii str. Neff	14917307
ACA1_088700	CDS	ACA1_088700	NW_004457431.1	207215	209030	R	encoded by transcript ACA1_088700A; uncharacterized protein	complement(join(207215..207262,207355..207440,207493..207624,207716..207860,207961..208201,208278..208364,208434..208480,208545..208628,208699..208732,208796..208906,208981..209030))	Acanthamoeba castellanii str. Neff	14917308
ACA1_088710	CDS	ACA1_088710	NW_004457431.1	209119	210720	D	encoded by transcript ACA1_088710A; uncharacterized protein	join(209119..209359,209426..209565,209632..209740,209884..209942,210005..210149,210226..210374,210484..210720)	Acanthamoeba castellanii str. Neff	14917309
ACA1_088720	CDS	ACA1_088720	NW_004457431.1	211119	213668	D	encoded by transcript ACA1_088720A; AmpGrelated permease	join(211119..211188,211326..211462,211672..211813,211910..211965,212061..212897,212997..213155,213232..213382,213457..213668)	Acanthamoeba castellanii str. Neff	14917310
ACA1_088730	CDS	ACA1_088730	NW_004457431.1	213767	215129	R	encoded by transcript ACA1_088730A; uncharacterized protein	complement(join(213767..214033,214121..214211,214322..214444,214533..214598,214688..214833,214950..215129))	Acanthamoeba castellanii str. Neff	14917311
ACA1_088740	CDS	ACA1_088740	NW_004457431.1	215325	217073	D	encoded by transcript ACA1_088740A; Ubox domain containing protein	join(215325..215378,215483..215640,215739..215791,215908..216023,216153..216267,216351..216425,216506..216649,216736..216817,216914..217073)	Acanthamoeba castellanii str. Neff	14917312
ACA1_088750	CDS	ACA1_088750	NW_004457431.1	217254	219237	R	encoded by transcript ACA1_088750A; U-box domain containing protein	complement(join(217254..217422,217549..217630,217724..217876,217951..218061,218109..218235,218330..218445,218557..218612,218712..218869,219184..219237))	Acanthamoeba castellanii str. Neff	14917333
ACA1_088770	CDS	ACA1_088770	NW_004457431.1	224627	225313	R	encoded by transcript ACA1_088770A; uncharacterized protein	complement(join(224627..224812,224969..225313))	Acanthamoeba castellanii str. Neff	14917334
ACA1_088780	CDS	ACA1_088780	NW_004457431.1	225983	226605	R	encoded by transcript ACA1_088780A; uncharacterized protein	complement(join(225983..226167,226281..226605))	Acanthamoeba castellanii str. Neff	14917336
ACA1_088790	CDS	ACA1_088790	NW_004457431.1	226964	229396	R	encoded by transcript ACA1_088790A; uncharacterized protein	complement(join(226964..227035,227124..227283,227314..228773,228845..228964,229053..229172,229241..229396))	Acanthamoeba castellanii str. Neff	14917337
ACA1_088800	CDS	ACA1_088800	NW_004457431.1	229481	231239	R	encoded by transcript ACA1_088800A; uncharacterized protein	complement(join(229481..229525,229546..229956,230065..230265,230336..230386,230451..230582,230656..230831,230951..231239))	Acanthamoeba castellanii str. Neff	14917338
ACA1_088810	CDS	ACA1_088810	NW_004457431.1	231756	234844	D	encoded by transcript ACA1_088810A; ABC transporter, ATPbinding domain containing protein	join(231756..231789,231885..232142,232234..232364,232457..232579,232670..232802,232894..233064,233152..233570,233672..233792,233949..234144,234223..234386,234488..234601,234711..234844)	Acanthamoeba castellanii str. Neff	14917339
ACA1_088820	CDS	ACA1_088820	NW_004457431.1	234967	239794	R	encoded by transcript ACA1_088820A; nicotinamide nucleotide transhydrogenase, putative	complement(join(234967..235108,235181..235302,235365..235459,235533..235643,235711..235791,235862..236023,236096..236233,236305..236422,236494..236662,236727..236808,236886..237019,237086..237270,237336..237521,237596..237672,237737..237896,238085..238396,238469..238540,238607..238738,238805..238927,239014..239072,239176..239794))	Acanthamoeba castellanii str. Neff	14917340
ACA1_088830	CDS	ACA1_088830	NW_004457431.1	240209	241476	R	encoded by transcript ACA1_088830A; isochorismatase family superfamily protein	complement(join(240209..240766,240854..241021,241140..241298,241363..241476))	Acanthamoeba castellanii str. Neff	14917341
ACA1_088840	CDS	ACA1_088840	NW_004457431.1	242012	246362	R	encoded by transcript ACA1_088840A; zinc finger, C3HC4 type (RING finger) domain containing protein	complement(join(242012..242102,242183..242295,242388..242576,242644..242815,242890..242972,243040..243157,243233..243324,243512..243671,243736..243803,243875..244015,244115..244252,244335..244508,244576..244713,244792..244914,244997..245094,245179..245310,245405..245728,245792..245861,245946..246107,246204..246362))	Acanthamoeba castellanii str. Neff	14917342
ACA1_088850	CDS	ACA1_088850	NW_004457431.1	247117	248473	R	encoded by transcript ACA1_088850A; endonuclease	complement(join(247117..247570,247653..247813,247882..248028,248111..248473))	Acanthamoeba castellanii str. Neff	14917343
ACA1_088860	CDS	ACA1_088860	NW_004457431.1	248733	251212	D	encoded by transcript ACA1_088860A; leucine rich repeat domain containing protein	join(248733..249011,249131..249275,249388..249535,249616..249725,249830..249911,249987..250079,250162..251212)	Acanthamoeba castellanii str. Neff	14917344
ACA1_088870	CDS	ACA1_088870	NW_004457431.1	251318	252640	R	encoded by transcript ACA1_088870A; checkpoint protein hus1, putative	complement(join(251318..251359,251447..251607,251678..251852,251929..252027,252109..252191,252263..252359,252416..252540,252598..252640))	Acanthamoeba castellanii str. Neff	14917345
ACA1_088880	CDS	ACA1_088880	NW_004457431.1	252780	254373	R	encoded by transcript ACA1_088880A; opioid growth factor receptor (ogfr) region protein, putative	complement(join(252780..253003,253073..253226,253308..253390,253455..253579,253654..253715,253772..253841,253919..253988,254052..254162,254352..>254373))	Acanthamoeba castellanii str. Neff	14917346
ACA1_088890	CDS	ACA1_088890	NW_004457431.1	254958	255746	D	encoded by transcript ACA1_088890A; uncharacterized protein	join(254958..255249,255313..255746)	Acanthamoeba castellanii str. Neff	14917347
ACA1_088900	CDS	ACA1_088900	NW_004457431.1	256319	258274	R	encoded by transcript ACA1_088900A; uncharacterized protein	complement(join(256319..256430,256549..256612,256687..256770,256857..256988,257079..257191,257270..257408,257489..257613,257690..257804,257956..258274))	Acanthamoeba castellanii str. Neff	14917348
ACA1_088920	CDS	ACA1_088920	NW_004457431.1	260428	266217	D	encoded by transcript ACA1_088920A; phorbol esters/diacylglycerol binding domain containing protein	join(260428..260809,260877..261076,261147..261281,261360..261442,261512..261586,261660..261754,261813..261909,261981..262095,262180..262390,262476..262592,262707..263664,263755..263876,263988..264239,264336..264454,264543..264622,264701..264797,264889..265080,265188..265250,265329..265412,265504..265650,265743..265843,265914..266073,266143..266217)	Acanthamoeba castellanii str. Neff	14917350
ACA1_088930	CDS	ACA1_088930	NW_004457431.1	267250	267802	R	encoded by transcript ACA1_088930A; uncharacterized protein	complement(join(267250..267296,267407..267617,267707..>267802))	Acanthamoeba castellanii str. Neff	14917351
ACA1_088940	CDS	ACA1_088940	NW_004457431.1	268971	271198	D	encoded by transcript ACA1_088940A; uncharacterized protein	join(268971..269066,269152..269216,269380..269599,269663..269749,269845..269927,270022..270110,270187..270296,270394..270416,270507..270724,270820..270857,270944..271002,271075..271198)	Acanthamoeba castellanii str. Neff	14917430
ACA1_088950	CDS	ACA1_088950	NW_004457431.1	271470	273163	D	encoded by transcript ACA1_088950A; CBS domain containing protein	join(271470..271591,271670..271756,271844..271907,271973..272035,272112..272217,272240..272348,272442..272616,272698..272878,272946..273163)	Acanthamoeba castellanii str. Neff	14917431
ACA1_088960	CDS	ACA1_088960	NW_004457431.1	273273	275909	R	encoded by transcript ACA1_088960A; betalactamase	complement(join(273273..273514,273593..273666,273748..273907,273986..274127,274212..274349,274432..274501,274516..274567,274635..274764,274837..274948,275009..275091,275162..275276,275369..275526,275679..275909))	Acanthamoeba castellanii str. Neff	14917432
ACA1_088970	CDS	ACA1_088970	NW_004457431.1	276253	277067	R	encoded by transcript ACA1_088970A; uncharacterized protein	complement(join(276253..276326,276411..276767,276863..277067))	Acanthamoeba castellanii str. Neff	14917433
ACA1_088980	CDS	ACA1_088980	NW_004457431.1	277319	278917	D	encoded by transcript ACA1_088980A; Mad3/BUB1 region 1 family protein	join(277319..277506,277566..277625,277698..277848,277942..278072,278168..278726,278843..278917)	Acanthamoeba castellanii str. Neff	14917434
ACA1_088990	CDS	ACA1_088990	NW_004457431.1	279613	285480	D	encoded by transcript ACA1_088990A; serine/threonine kinase	join(279613..279791,279927..280675,280780..281061,281135..281247,281316..281387,281461..281622,281698..281971,282061..282208,282287..282495,282587..282782,282853..283081,283153..285480)	Acanthamoeba castellanii str. Neff	14917435
ACA1_089000	CDS	ACA1_089000	NW_004457431.1	286373	292698	D	encoded by transcript ACA1_089000A; MutS domain containing protein	join(286373..286448,286841..287119,287195..287428,287480..287610,287700..287795,287903..287980,288056..288142,288235..288455,288553..288630,288700..288926,289007..289164,289252..289456,289532..289690,289791..289931,290002..290159,290239..290317,290403..290476,290573..290758,290842..291097,291195..291324,291400..291475,291552..291645,291715..291853,291922..292074,292207..292225,292357..292442,292518..292698)	Acanthamoeba castellanii str. Neff	14917436
ACA1_089010	CDS	ACA1_089010	NW_004457431.1	293511	299335	D	encoded by transcript ACA1_089010A; serine/threonine kinase	join(293511..293644,293875..295066,295157..295228,295375..295536,295617..296041,296117..296524,296644..296872,296957..297545,297618..297739,297848..299335)	Acanthamoeba castellanii str. Neff	14917437
ACA1_089020	CDS	ACA1_089020	NW_004457431.1	299427	299969	D	encoded by transcript ACA1_089020A; uncharacterized protein	join(299427..299456,299496..299969)	Acanthamoeba castellanii str. Neff	14917438
ACA1_089030	CDS	ACA1_089030	NW_004457431.1	300291	302823	R	encoded by transcript ACA1_089030A; farnesyldiphosphate farnesyltransferase	complement(join(300291..300395,300485..300809,300983..301115,301214..301383,301494..301633,301754..301828,301922..302041,302380..302445,302494..302637,302683..302823))	Acanthamoeba castellanii str. Neff	14917439
ACA1_089040	CDS	ACA1_089040	NW_004457431.1	303462	305194	D	encoded by transcript ACA1_089040A; UBA/TS-N domain containing protein	join(303462..303469,303496..303604,303629..303691,303762..303893,303966..304092,304197..304449,304526..304638,304732..304817,304891..304968,305069..305194)	Acanthamoeba castellanii str. Neff	14917440
ACA1_089050	CDS	ACA1_089050	NW_004457431.1	305497	311859	D	encoded by transcript ACA1_089050A; serine/threonine kinase	join(305497..305678,305825..306647,306752..307007,307118..307230,307454..307615,307736..308016,308114..308245,308350..308558,308653..308867,308957..309160,309251..309585,309670..309752,309830..310006,310103..311859)	Acanthamoeba castellanii str. Neff	14917441
ACA1_089060	CDS	ACA1_089060	NW_004457431.1	311995	313580	R	encoded by transcript ACA1_089060A; uncharacterized protein	complement(join(311995..312056,312135..312270,312334..312483,312605..312657,312752..312825,312955..313580))	Acanthamoeba castellanii str. Neff	14917442
ACA1_089070	CDS	ACA1_089070	NW_004457431.1	313770	314751	D	encoded by transcript ACA1_089070A; uncharacterized protein	join(313770..314022,314105..314208,314311..314384,314476..314625,314733..314751)	Acanthamoeba castellanii str. Neff	14917443
ACA1_089080	CDS	ACA1_089080	NW_004457431.1	314867	316904	D	encoded by transcript ACA1_089080A; malate/Llactate dehydrogenase	join(314867..315011,315079..315107,315170..315251,315419..315518,315614..315714,315791..315926,316044..316134,316220..316310,316396..316484,316572..316682,316797..316904)	Acanthamoeba castellanii str. Neff	14917444
ACA1_089090	CDS	ACA1_089090	NW_004457431.1	317152	319902	R	encoded by transcript ACA1_089090A; regulator of g protein signaling domain containing protein	complement(join(317152..317253,317324..317659,317743..317853,317960..318412,318505..318597,318660..318712,318996..319902))	Acanthamoeba castellanii str. Neff	14917445
ACA1_089100	CDS	ACA1_089100	NW_004457431.1	320757	322966	D	encoded by transcript ACA1_089100A; transporter, major facilitator subfamily protein	join(320757..320865,320897..320928,321002..321104,321191..321342,321423..321550,321685..321827,321903..322345,322426..322611,322697..322966)	Acanthamoeba castellanii str. Neff	14917446
ACA1_089110	CDS	ACA1_089110	NW_004457431.1	323113	324019	R	encoded by transcript ACA1_089110A; cupin domain containing protein	complement(join(323113..323763,323846..324019))	Acanthamoeba castellanii str. Neff	14917410
ACA1_089120	CDS	ACA1_089120	NW_004457431.1	324257	325295	R	encoded by transcript ACA1_089120A; uncharacterized protein	complement(join(324257..324445,324526..324707,324792..324858,324952..325055,325169..325295))	Acanthamoeba castellanii str. Neff	14917411
ACA1_089130	CDS	ACA1_089130	NW_004457431.1	325482	328216	D	encoded by transcript ACA1_089130A; betalactamase	join(325482..325727,325942..326105,326192..326306,326378..326460,326535..326646,326715..326844,326939..327075,327153..327290,327382..327523,327593..327752,327825..327898,327975..328216)	Acanthamoeba castellanii str. Neff	14917412
ACA1_089140	CDS	ACA1_089140	NW_004457431.1	328460	331453	D	encoded by transcript ACA1_089140A; amidohydrolase superfamily protein	join(328460..328729,328828..329011,329119..329305,329392..329486,329574..329673,329761..329852,329925..329983,330087..330159,330242..330302,330379..330513,330599..330716,330800..330967,331096..331159,331242..331453)	Acanthamoeba castellanii str. Neff	14917413
ACA1_089150	CDS	ACA1_089150	NW_004457431.1	331684	332683	D	encoded by transcript ACA1_089150A; vacuolar proton ATPase, putative	join(331684..331886,331969..332125,332276..332469,332557..332683)	Acanthamoeba castellanii str. Neff	14917414
ACA1_089170	CDS	ACA1_089170	NW_004457431.1	334762	336272	D	encoded by transcript ACA1_089170A; FAD binding domain containing protein	join(334762..335907,335922..336272)	Acanthamoeba castellanii str. Neff	14917416
ACA1_089180	CDS	ACA1_089180	NW_004457431.1	336354	337078	R	encoded by transcript ACA1_089180A; uncharacterized protein	complement(join(336354..336488,336575..337078))	Acanthamoeba castellanii str. Neff	14917417
ACA1_089190	CDS	ACA1_089190	NW_004457431.1	337542	338156	R	encoded by transcript ACA1_089190A; uncharacterized protein	complement(337542..338156)	Acanthamoeba castellanii str. Neff	14917418
ACA1_089200	CDS	ACA1_089200	NW_004457431.1	338463	339914	R	encoded by transcript ACA1_089200A; uncharacterized protein	complement(join(338463..338534,338546..338636,338705..338906,339008..339099,339189..339402,339442..339621,339693..339789,339879..339914))	Acanthamoeba castellanii str. Neff	14917419
ACA1_089210	CDS	ACA1_089210	NW_004457431.1	340505	343328	R	encoded by transcript ACA1_089210A; Ras subfamily protein	complement(join(340505..340632,340727..340778,340869..340950,341035..341162,341242..341298,341390..341516,341576..341663,341725..341851,341895..341974,342051..342147,342245..342317,342380..342519,342636..342720,342799..343328))	Acanthamoeba castellanii str. Neff	14917420
ACA1_089220	CDS	ACA1_089220	NW_004457431.1	343734	345234	R	encoded by transcript ACA1_089220A; Solute carrier family 35, member E3, putative	complement(join(343734..343907,343986..344100,344181..344263,344350..344502,344573..344622,344703..344853,344976..345075,345158..345234))	Acanthamoeba castellanii str. Neff	14917421
ACA1_089230	CDS	ACA1_089230	NW_004457431.1	345690	346017	D	encoded by transcript ACA1_089230A; protein translocase SEC61 complex gamma subunit, archaeal and eukaryotic, putative	join(345690..345783,345905..346017)	Acanthamoeba castellanii str. Neff	14917422
ACA1_089240	CDS	ACA1_089240	NW_004457431.1	346137	346830	D	encoded by transcript ACA1_089240A; uncharacterized protein	join(346137..346398,346462..346570,346644..346830)	Acanthamoeba castellanii str. Neff	14917423
ACA1_089250	CDS	ACA1_089250	NW_004457431.1	347155	350011	D	encoded by transcript ACA1_089250A; BTB/POZ domain containing protein	join(347155..347258,347355..347455,347540..347633,347753..347847,347936..347999,348090..348190,348287..348424,348515..348579,348640..348724,348803..348949,349028..349545,349648..349833,349913..350011)	Acanthamoeba castellanii str. Neff	14917424
ACA1_089260	CDS	ACA1_089260	NW_004457431.1	350094	352834	R	encoded by transcript ACA1_089260A; uncharacterized protein	complement(join(350094..350371,350384..350434,350530..350747,350814..350890,351074..351198,351269..351434,351517..351636,351881..352009,352094..352156,352297..352427,352557..352656,352787..352834))	Acanthamoeba castellanii str. Neff	14917425
ACA1_089270	CDS	ACA1_089270	NW_004457431.1	353212	354580	R	encoded by transcript ACA1_089270A; chromatin modificationrelated protein eaf3, putative	complement(join(353212..353235,353334..353467,353557..353642,353728..353820,354190..354275,354344..354580))	Acanthamoeba castellanii str. Neff	14917426
ACA1_089280	CDS	ACA1_089280	NW_004457431.1	354727	355735	D	encoded by transcript ACA1_089280A; uncharacterized protein	join(354727..354864,354947..355045,355133..355256,355532..355617,355685..355735)	Acanthamoeba castellanii str. Neff	14917427
ACA1_089290	CDS	ACA1_089290	NW_004457431.1	355819	360360	R	encoded by transcript ACA1_089290A; pitrilysin metallopeptidase 1, putative	complement(join(355819..355998,356083..356219,356291..356421,356546..356679,356754..356879,356983..357234,357306..357432,357469..357535,357618..357819,357938..358047,358131..358268,358348..358456,358538..358630,358700..358804,358893..358990,359077..359235,359332..359489,359580..359740,359823..359881,359960..360112,360183..360360))	Acanthamoeba castellanii str. Neff	14917428
ACA1_089300	CDS	ACA1_089300	NW_004457431.1	361100	362015	D	encoded by transcript ACA1_089300A; uncharacterized protein	join(361100..361521,361631..361751,361896..362015)	Acanthamoeba castellanii str. Neff	14917429
ACA1_089310	CDS	ACA1_089310	NW_004457431.1	362144	363524	D	encoded by transcript ACA1_089310A; uncharacterized protein	join(362144..362331,362426..362820,362904..362987,363060..363202,363303..363524)	Acanthamoeba castellanii str. Neff	14917384
ACA1_089320	CDS	ACA1_089320	NW_004457431.1	363589	369713	R	encoded by transcript ACA1_089320A; cytosolic regulator of adenylate cyclase	complement(join(363589..363703,363782..363937,364033..364190,364281..364425,364521..364724,364820..364881,365119..365203,365268..365338,365433..365510,365581..365666,365693..365790,365823..365916,366007..366112,366285..366389,366568..366676,366762..366832,366891..366989,367363..367494,367570..367669,367733..367830,367909..367996,368064..368176,368794..368852,369000..369055,369138..369292,369360..369713))	Acanthamoeba castellanii str. Neff	14917385
ACA1_089330	CDS	ACA1_089330	NW_004457431.1	370379	372315	R	encoded by transcript ACA1_089330A; glycosyl hydrolase	complement(join(370379..370548,370656..370779,370863..371022,371099..371218,371307..371413,371492..371572,371650..371795,371841..371855,371872..372045,372123..>372315))	Acanthamoeba castellanii str. Neff	14917386
ACA1_089440	CDS	ACA1_089440	NW_004457431.1	372597	373638	D	encoded by transcript ACA1_089440A; NBARC domain containing protein	join(<372597..372812,372900..373102,373188..373358,373452..>373638)	Acanthamoeba castellanii str. Neff	14917387
ACA1_089650	CDS	ACA1_089650	NW_004457431.1	374982	376077	D	encoded by transcript ACA1_089650A; NACHT domain containing protein	join(374982..374990,375041..375170,375250..375350,375446..375514,375658..375993,376054..376077)	Acanthamoeba castellanii str. Neff	14917388
ACA1_089760	CDS	ACA1_089760	NW_004457431.1	376733	378915	R	encoded by transcript ACA1_089760A; betaglucuronidase, putative	complement(join(376733..376902,377007..377130,377216..377375,377409..377496,377574..377766,377839..377927,378024..378222,378294..378439,378523..378628,378700..378804,378883..378915))	Acanthamoeba castellanii str. Neff	14917389
ACA1_089770	CDS	ACA1_089770	NW_004457431.1	379080	380811	R	encoded by transcript ACA1_089770A; Fbox domain containing protein	complement(join(379080..379223,379328..379418,379489..379634,379700..379888,379971..380072,380163..380480,380566..380811))	Acanthamoeba castellanii str. Neff	14917390
ACA1_089780	CDS	ACA1_089780	NW_004457431.1	380884	382315	D	encoded by transcript ACA1_089780A; proteasome assembly chaperone 2, putative	join(380884..380946,381091..381262,381335..381393,381476..381529,381600..381664,381763..381913,382013..382151,382218..382315)	Acanthamoeba castellanii str. Neff	14917391
ACA1_089790	CDS	ACA1_089790	NW_004457431.1	382481	383815	R	encoded by transcript ACA1_089790A; DNA ligaselike, putative	complement(join(382481..382644,382762..382900,382978..383051,383142..383216,383336..383439,383574..383815))	Acanthamoeba castellanii str. Neff	14917392
ACA1_089800	CDS	ACA1_089800	NW_004457431.1	384221	385980	R	encoded by transcript ACA1_089800A; serine/threonine kinase	complement(join(384221..384319,384413..384550,384638..384834,384927..385026,385155..385256,385338..385472,385578..385690,385815..385980))	Acanthamoeba castellanii str. Neff	14917393
ACA1_089810	CDS	ACA1_089810	NW_004457431.1	386685	391371	D	encoded by transcript ACA1_089810A; Tubulin-tyrosine ligase family protein	join(386685..386756,386830..386874,386963..387170,387256..387385,387483..387645,387750..387953,388031..388144,388240..388454,388554..388692,388777..388842,388964..389134,389223..389397,389555..389636,389650..389928,390024..390108,390207..390556,390640..390708,390721..390844,390934..391371)	Acanthamoeba castellanii str. Neff	14917394
ACA1_089820	CDS	ACA1_089820	NW_004457431.1	391558	391929	D	encoded by transcript ACA1_089820A; uncharacterized protein	391558..391929	Acanthamoeba castellanii str. Neff	14917395
ACA1_089830	CDS	ACA1_089830	NW_004457431.1	392162	393593	D	encoded by transcript ACA1_089830A; non-specific protein-tyrosine kinase	join(392162..392475,392544..392813,392913..393048,393144..393195,393274..393593)	Acanthamoeba castellanii str. Neff	14917396
ACA1_089840	CDS	ACA1_089840	NW_004457431.1	393847	395713	D	encoded by transcript ACA1_089840A; calcium/calmodulindependent protein kinase	join(393847..394247,394332..394448,394590..394760,394830..394966,395064..395139,395248..395360,395443..395574,395637..395713)	Acanthamoeba castellanii str. Neff	14917397
ACA1_089850	CDS	ACA1_089850	NW_004457431.1	395996	402551	R	encoded by transcript ACA1_089850A; bromodomain domain containing protein	complement(join(395996..396559,396679..398886,398938..399729,399839..399908,400007..400103,400217..400451,400570..400888,400981..401328,401709..402324,402389..402551))	Acanthamoeba castellanii str. Neff	14917398
ACA1_089960	CDS	ACA1_089960	NW_004457431.1	402988	406024	R	encoded by transcript ACA1_089960A; Dual specificity protein kinase	complement(join(402988..403074,403155..403254,403336..403482,403557..403686,403767..403854,403924..404042,404116..404271,404374..404447,404526..404705,404793..404880,404964..405072,405146..405279,405374..405511,405637..405748,405821..406024))	Acanthamoeba castellanii str. Neff	14917399
ACA1_089970	CDS	ACA1_089970	NW_004457431.1	406332	407776	R	encoded by transcript ACA1_089970A; macro domain containing protein	complement(join(406332..406694,406802..406885,406971..407028,407105..407210,407287..407386,407525..407776))	Acanthamoeba castellanii str. Neff	14917400
ACA1_089980	CDS	ACA1_089980	NW_004457431.1	407922	411136	R	encoded by transcript ACA1_089980A; uncharacterized protein	complement(join(407922..409728,409801..410147,410216..410312,410414..410662,410734..410886,410952..411136))	Acanthamoeba castellanii str. Neff	14917401
ACA1_089990	CDS	ACA1_089990	NW_004457431.1	411475	412324	D	encoded by transcript ACA1_089990A; Ras subfamily protein	join(411475..411672,411709..411835,411900..412324)	Acanthamoeba castellanii str. Neff	14917242
ACA1_090000	CDS	ACA1_090000	NW_004457431.1	412668	413559	R	encoded by transcript ACA1_090000A; uncharacterized protein	complement(join(412668..412759,412826..412975,413187..413559))	Acanthamoeba castellanii str. Neff	14917243
ACA1_090010	CDS	ACA1_090010	NW_004457431.1	413861	415271	R	encoded by transcript ACA1_090010A; uncharacterized protein	complement(join(413861..414345,414599..414679,414776..415271))	Acanthamoeba castellanii str. Neff	14917244
ACA1_090020	CDS	ACA1_090020	NW_004457431.1	415813	416268	R	encoded by transcript ACA1_090020A; uncharacterized protein	complement(join(415813..416000,416070..416268))	Acanthamoeba castellanii str. Neff	14917245
ACA1_090030	CDS	ACA1_090030	NW_004457431.1	416820	419177	R	encoded by transcript ACA1_090030A; Tcomplex protein 1, theta subunit	complement(join(416820..416885,416976..417089,417174..417284,417357..417517,417586..417754,417823..417996,418065..418468,418593..418737,418799..418935,419042..419177))	Acanthamoeba castellanii str. Neff	14917246
ACA1_090040	CDS	ACA1_090040	NW_004457431.1	419447	420067	R	encoded by transcript ACA1_090040A; RNA polymerase Rpb3/Rpb11 dimerization domain containing protein	complement(join(419447..419601,419679..419758,419840..419940,420014..420067))	Acanthamoeba castellanii str. Neff	14917247
ACA1_090050	CDS	ACA1_090050	NW_004457431.1	420306	421530	D	encoded by transcript ACA1_090050A; uncharacterized protein	join(420306..420383,420588..420632,420715..420841,420946..421069,421323..421530)	Acanthamoeba castellanii str. Neff	14917248
ACA1_090060	CDS	ACA1_090060	NW_004457431.1	421961	425326	D	encoded by transcript ACA1_090060A; Ras subfamily protein	join(421961..422017,422193..422341,422428..422470,422583..422633,422746..422830,422914..422970,423071..423217,423389..423467,423621..423750,423842..423994,424084..424246,424385..424473,424560..424699,424819..424906,424985..425114,425184..425326)	Acanthamoeba castellanii str. Neff	14917249
ACA1_090070	CDS	ACA1_090070	NW_004457431.1	425367	425743	R	encoded by transcript ACA1_090070A; uncharacterized protein	complement(join(425367..425678,425723..425743))	Acanthamoeba castellanii str. Neff	14917250
ACA1_090080	CDS	ACA1_090080	NW_004457431.1	426118	428787	R	encoded by transcript ACA1_090080A; endonuclease/exonuclease/phosphatase family protein	complement(join(426118..427055,427182..427337,427631..427808,427921..428019,428118..428240,428332..428432,428492..428521,428622..428787))	Acanthamoeba castellanii str. Neff	14917251
ACA1_090090	CDS	ACA1_090090	NW_004457431.1	429000	431987	D	encoded by transcript ACA1_090090A; elongation factor Tu GTP binding domain containing protein	429000..431987	Acanthamoeba castellanii str. Neff	14917252
ACA1_090100	CDS	ACA1_090100	NW_004457431.1	432615	436776	D	encoded by transcript ACA1_090100A; Ras subfamily protein	join(432615..432641,432962..433440,433562..433683,433780..433875,433951..434026,434115..434172,434252..434357,434432..434475,434551..434633,434714..434827,434932..435049,435211..435279,435357..435404,435494..435519,435625..435735,435857..435944,436045..436776)	Acanthamoeba castellanii str. Neff	14917253
ACA1_090110	CDS	ACA1_090110	NW_004457431.1	437232	441840	D	encoded by transcript ACA1_090110A; TBC domain containing protein	join(437232..437435,437699..437754,437864..438009,438098..438243,438330..438500,438600..438776,439176..439837,439927..440032,440110..440226,440304..440410,440522..440636,440750..440812,440891..441153,441232..441397,441463..441840)	Acanthamoeba castellanii str. Neff	14917254
ACA1_090120	CDS	ACA1_090120	NW_004457431.1	442027	442325	D	encoded by transcript ACA1_090120A; uncharacterized protein	join(442027..442173,442190..442255,442269..442325)	Acanthamoeba castellanii str. Neff	14917255
ACA1_090130	CDS	ACA1_090130	NW_004457431.1	442466	444887	D	encoded by transcript ACA1_090130A; uncharacterized protein	join(442466..442605,442680..442932,443039..443637,443701..443845,443921..444146,444255..444449,444512..444640,444718..444887)	Acanthamoeba castellanii str. Neff	14917256
ACA1_090140	CDS	ACA1_090140	NW_004457431.1	444979	446629	R	encoded by transcript ACA1_090140A; uncharacterized protein	complement(join(444979..445049,445155..445235,445342..445548,445624..445964,446143..446432,446510..446629))	Acanthamoeba castellanii str. Neff	14917257
ACA1_090150	CDS	ACA1_090150	NW_004457431.1	446860	448393	D	encoded by transcript ACA1_090150A; uncharacterized protein	join(446860..447310,447438..447572,447662..448185,448316..448393)	Acanthamoeba castellanii str. Neff	14917258
ACA1_090160	CDS	ACA1_090160	NW_004457431.1	448659	449683	R	encoded by transcript ACA1_090160A; uncharacterized protein	complement(join(448659..448796,448872..449312,449388..449503,449581..449683))	Acanthamoeba castellanii str. Neff	14917259
ACA1_090170	CDS	ACA1_090170	NW_004457431.1	451403	453702	D	encoded by transcript ACA1_090170A; Ras subfamily protein	join(451403..451555,451652..451764,451835..451914,451983..452134,452233..452388,452457..452610,452677..452775,452868..452996,453121..453303,453377..453702)	Acanthamoeba castellanii str. Neff	14917260
ACA1_090180	CDS	ACA1_090180	NW_004457431.1	453827	455268	R	encoded by transcript ACA1_090180A; ABC1 domain containing protein	complement(join(453827..453965,454032..454179,454247..454385,454642..454715,454798..454873,454968..455073,455129..455268))	Acanthamoeba castellanii str. Neff	14917261
ACA1_090190	CDS	ACA1_090190	NW_004457431.1	455419	456812	R	encoded by transcript ACA1_090190A; uncharacterized protein	complement(join(455419..455588,455653..455734,455824..455921,455982..456054,456130..456189,456261..456500,456561..456812))	Acanthamoeba castellanii str. Neff	14917272
ACA1_090200	CDS	ACA1_090200	NW_004457431.1	457245	458279	D	encoded by transcript ACA1_090200A; cell wall anchor domain containing protein	join(457245..457511,457568..457722,457796..457902,457978..458081,458148..458279)	Acanthamoeba castellanii str. Neff	14917273
ACA1_090210	CDS	ACA1_090210	NW_004457431.1	458445	459054	R	encoded by transcript ACA1_090210A; uncharacterized protein	complement(join(458445..458594,458677..459054))	Acanthamoeba castellanii str. Neff	14917274
ACA1_090220	CDS	ACA1_090220	NW_004457431.1	459632	461761	R	encoded by transcript ACA1_090220A; TBC domain containing protein	complement(join(459632..459832,459926..460042,460114..460311,460405..460505,460593..460709,460794..460888,460971..461074,461180..461307,461392..461500,461604..461638,461710..461761))	Acanthamoeba castellanii str. Neff	14917275
ACA1_090230	CDS	ACA1_090230	NW_004457431.1	462084	463382	D	encoded by transcript ACA1_090230A; Chromatin associated protein	join(462084..462125,462243..462386,462465..462541,462642..462721,462804..462883,462974..463084,463185..463382)	Acanthamoeba castellanii str. Neff	14917276
ACA1_090240	CDS	ACA1_090240	NW_004457431.1	464291	465140	R	encoded by transcript ACA1_090240A; magnesiumdependent phosphatase-1, putative	complement(join(464291..464315,464394..464484,464545..464648,464743..465140))	Acanthamoeba castellanii str. Neff	14917277
ACA1_090250	CDS	ACA1_090250	NW_004457431.1	465858	467516	R	encoded by transcript ACA1_090250A; RNA export 1, putative	complement(join(465858..465950,466067..466207,466293..466407,466548..466672,466814..467047,467127..467303,467394..467516))	Acanthamoeba castellanii str. Neff	14917278
ACA1_090260	CDS	ACA1_090260	NW_004457431.1	468085	470565	D	encoded by transcript ACA1_090260A; serine/threonine kinase	join(468085..468232,468612..468902,469058..469202,469302..469359,469446..469568,469696..469762,469852..469980,470080..470172,470283..470302,470449..470565)	Acanthamoeba castellanii str. Neff	14917279
ACA1_090270	CDS	ACA1_090270	NW_004457431.1	471062	472264	D	encoded by transcript ACA1_090270A; uncharacterized protein	471062..472264	Acanthamoeba castellanii str. Neff	14917280
ACA1_090280	CDS	ACA1_090280	NW_004457431.1	472449	474269	R	encoded by transcript ACA1_090280A; uncharacterized protein	complement(join(472449..472609,472738..472816,473077..473307,473473..473572,473738..473865,473940..474001,474131..474269))	Acanthamoeba castellanii str. Neff	14917281
ACA1_090290	CDS	ACA1_090290	NW_004457431.1	474755	476046	R	encoded by transcript ACA1_090290A; uncharacterized protein	complement(join(474755..474851,474933..474989,475084..475189,475261..475374,475488..476046))	Acanthamoeba castellanii str. Neff	14917282
ACA1_090300	CDS	ACA1_090300	NW_004457431.1	481351	481776	D	encoded by transcript ACA1_090300A; uncharacterized protein	481351..481776	Acanthamoeba castellanii str. Neff	14917283
ACA1_090310	CDS	ACA1_090310	NW_004457431.1	482286	482678	D	encoded by transcript ACA1_090310A; uncharacterized protein	join(482286..482362,482396..482678)	Acanthamoeba castellanii str. Neff	14917284
ACA1_090320	CDS	ACA1_090320	NW_004457431.1	483743	484531	D	encoded by transcript ACA1_090320A; uncharacterized protein	483743..484531	Acanthamoeba castellanii str. Neff	14917285
ACA1_090330	CDS	ACA1_090330	NW_004457431.1	487371	488912	R	encoded by transcript ACA1_090330A; peptidase	complement(join(487371..487505,488250..488335,488424..488528,488640..488758,488830..488912))	Acanthamoeba castellanii str. Neff	14917286
ACA1_090340	CDS	ACA1_090340	NW_004457431.1	490571	491050	R	encoded by transcript ACA1_090340A; uncharacterized protein	complement(join(490571..490620,490719..490813,490845..491050))	Acanthamoeba castellanii str. Neff	14917287
ACA1_090350	CDS	ACA1_090350	NW_004457431.1	491779	492141	D	encoded by transcript ACA1_090350A; uncharacterized protein	join(491779..491787,491830..492141)	Acanthamoeba castellanii str. Neff	14917288
ACA1_090360	CDS	ACA1_090360	NW_004457431.1	492291	493191	D	encoded by transcript ACA1_090360A; PIF1 helicaselike protein	join(492291..492875,492979..493191)	Acanthamoeba castellanii str. Neff	14917289
ACA1_090370	CDS	ACA1_090370	NW_004457431.1	494787	496379	D	encoded by transcript ACA1_090370A; uncharacterized protein	join(494787..495114,495250..495545,495582..496379)	Acanthamoeba castellanii str. Neff	14917290
ACA1_090380	CDS	ACA1_090380	NW_004457431.1	496455	497206	R	encoded by transcript ACA1_090380A; uncharacterized protein	complement(join(496455..496541,496658..497206))	Acanthamoeba castellanii str. Neff	14917291
ACA1_090400	CDS	ACA1_090400	NW_004457431.1	498749	499401	R	encoded by transcript ACA1_090400A; uncharacterized protein	complement(join(498749..498932,498961..499228,499272..499401))	Acanthamoeba castellanii str. Neff	14917293
ACA1_090410	CDS	ACA1_090410	NW_004457431.1	499851	500327	D	encoded by transcript ACA1_090410A; uncharacterized protein	499851..500327	Acanthamoeba castellanii str. Neff	14917294
ACA1_090420	CDS	ACA1_090420	NW_004457431.1	501231	501734	R	encoded by transcript ACA1_090420A; cathepsin propeptide inhibitor domain (i29) protein	complement(501231..501734)	Acanthamoeba castellanii str. Neff	14917295
ACA1_090430	CDS	ACA1_090430	NW_004457431.1	502615	503275	D	encoded by transcript ACA1_090430A; uncharacterized protein	join(502615..502663,502718..502968,503036..503275)	Acanthamoeba castellanii str. Neff	14917367
ACA1_167220	CDS	ACA1_167220	NW_004457430.1	188	2437	D	encoded by transcript ACA1_167220A; uncharacterized protein	join(188..223,339..442,508..581,760..945,1050..1168,1249..1362,1431..1489,1556..1686,1761..1936,2068..2165,2231..2388,2421..2437)	Acanthamoeba castellanii str. Neff	14917227
ACA1_167330	CDS	ACA1_167330	NW_004457430.1	5955	6771	D	encoded by transcript ACA1_167330A; uncharacterized protein	join(5955..6210,6276..6308,6473..6585,6709..6771)	Acanthamoeba castellanii str. Neff	14917238
ACA1_167340	CDS	ACA1_167340	NW_004457430.1	7045	8477	D	encoded by transcript ACA1_167340A; 2-oxoglutarate/malate carrier protein, putative	join(7045..7223,7311..7431,7571..7757,7892..8084,8129..8292,8380..8477)	Acanthamoeba castellanii str. Neff	14917239
ACA1_167450	CDS	ACA1_167450	NW_004457430.1	12355	12669	D	encoded by transcript ACA1_167450A; uncharacterized protein	join(12355..12477,12511..12669)	Acanthamoeba castellanii str. Neff	14917240
ACA1_167460	CDS	ACA1_167460	NW_004457430.1	13534	14086	R	encoded by transcript ACA1_167460A; uncharacterized protein	complement(join(13534..13553,13705..13830,13892..13970,14060..14086))	Acanthamoeba castellanii str. Neff	14917241
ACA1_167570	CDS	ACA1_167570	NW_004457430.1	17493	17873	R	encoded by transcript ACA1_167570A; uncharacterized protein	complement(<17493..17873)	Acanthamoeba castellanii str. Neff	14917228
ACA1_167580	CDS	ACA1_167580	NW_004457430.1	18814	20624	D	encoded by transcript ACA1_167580A; ankyrin repeat-containing protein	join(18814..18839,18996..19257,19327..19964,20051..20624)	Acanthamoeba castellanii str. Neff	14917229
ACA1_167690	CDS	ACA1_167690	NW_004457430.1	25539	26085	D	encoded by transcript ACA1_167690A; uncharacterized protein	join(<25539..25609,25699..25820,25919..26022,26062..26085)	Acanthamoeba castellanii str. Neff	14917230
ACA1_167800	CDS	ACA1_167800	NW_004457430.1	30616	31564	D	encoded by transcript ACA1_167800A; uncharacterized protein	join(30616..30661,30811..30899,31016..31086,31162..31243,31355..31564)	Acanthamoeba castellanii str. Neff	14917231
ACA1_167810	CDS	ACA1_167810	NW_004457430.1	32693	33647	D	encoded by transcript ACA1_167810A; methyltransferase domain containing protein	join(32693..32713,32736..32817,32845..33148,33209..33647)	Acanthamoeba castellanii str. Neff	14917232
ACA1_167820	CDS	ACA1_167820	NW_004457430.1	34361	34696	R	encoded by transcript ACA1_167820A; tryptophan synthase subunit beta, putative	complement(34361..34696)	Acanthamoeba castellanii str. Neff	14917233
ACA1_167930	CDS	ACA1_167930	NW_004457430.1	39195	40223	D	encoded by transcript ACA1_167930A; anthranilate synthase component I, putative	join(39195..39366,39493..39618,39686..39954,40053..>40223)	Acanthamoeba castellanii str. Neff	14917234
ACA1_168040	CDS	ACA1_168040	NW_004457430.1	46743	47177	R	encoded by transcript ACA1_168040A; uncharacterized protein	complement(join(46743..46943,46980..>47177))	Acanthamoeba castellanii str. Neff	14917235
ACA1_168150	CDS	ACA1_168150	NW_004457430.1	51690	51917	D	encoded by transcript ACA1_168150A; chorismate synthase	<51690..51917	Acanthamoeba castellanii str. Neff	14917236
ACA1_168160	CDS	ACA1_168160	NW_004457430.1	52718	53067	R	encoded by transcript ACA1_168160A; uncharacterized protein	complement(join(52718..52768,52783..52859,52948..52985,53039..53067))	Acanthamoeba castellanii str. Neff	14917237
ACA1_146250	CDS	ACA1_146250	NW_004457429.1	4811	5316	R	encoded by transcript ACA1_146250A; uncharacterized protein	complement(join(4811..4941,5124..5316))	Acanthamoeba castellanii str. Neff	14917226
ACA1_146260	CDS	ACA1_146260	NW_004457429.1	7218	7571	D	encoded by transcript ACA1_146260A; SH3 domain containing protein	join(7218..7306,7406..7571)	Acanthamoeba castellanii str. Neff	14917201
ACA1_146270	CDS	ACA1_146270	NW_004457429.1	7663	8345	R	encoded by transcript ACA1_146270A; ubiquitin domain containing protein	complement(join(7663..7955,8129..8345))	Acanthamoeba castellanii str. Neff	14917202
ACA1_146280	CDS	ACA1_146280	NW_004457429.1	9595	10419	D	encoded by transcript ACA1_146280A; uncharacterized protein	join(9595..9955,10049..10419)	Acanthamoeba castellanii str. Neff	14917200
ACA1_146290	CDS	ACA1_146290	NW_004457429.1	13101	13828	D	encoded by transcript ACA1_146290A; uncharacterized protein	join(13101..13183,13297..13828)	Acanthamoeba castellanii str. Neff	14917195
ACA1_146400	CDS	ACA1_146400	NW_004457429.1	15741	16924	R	encoded by transcript ACA1_146400A; uncharacterized protein	complement(join(15741..15958,16189..16259,16375..16423,16798..16924))	Acanthamoeba castellanii str. Neff	14917196
ACA1_146410	CDS	ACA1_146410	NW_004457429.1	17520	18662	R	encoded by transcript ACA1_146410A; RHOQ protein	complement(join(17520..17670,17774..17841,17856..17942,18050..18136,18229..18257,18366..18454,18646..18662))	Acanthamoeba castellanii str. Neff	14917197
ACA1_146420	CDS	ACA1_146420	NW_004457429.1	18724	19645	R	encoded by transcript ACA1_146420A; Catalase, putative	complement(join(18724..18936,19023..19129,19198..19315,19619..19645))	Acanthamoeba castellanii str. Neff	14917198
ACA1_146430	CDS	ACA1_146430	NW_004457429.1	22090	24465	R	encoded by transcript ACA1_146430A; Catalase, putative	complement(join(22090..22302,22385..22491,22570..22710,22818..22907,22993..23132,23234..23423,23531..23770,23875..24109,24208..24465))	Acanthamoeba castellanii str. Neff	14917199
ACA1_146440	CDS	ACA1_146440	NW_004457429.1	25131	26654	D	encoded by transcript ACA1_146440A; methyltransferase domain containing protein	join(25131..25343,25427..25533,25632..25683,25754..25834,25930..25978,26049..26105,26179..26238,26308..26654)	Acanthamoeba castellanii str. Neff	14917210
ACA1_146450	CDS	ACA1_146450	NW_004457429.1	27399	28104	D	encoded by transcript ACA1_146450A; uncharacterized protein	join(27399..27522,27589..27638,27714..27826,27852..28104)	Acanthamoeba castellanii str. Neff	14917211
ACA1_146460	CDS	ACA1_146460	NW_004457429.1	28250	29340	R	encoded by transcript ACA1_146460A; uncharacterized protein	complement(join(28250..28324,28399..28461,28685..28760,28848..29091,29151..29340))	Acanthamoeba castellanii str. Neff	14917212
ACA1_146470	CDS	ACA1_146470	NW_004457429.1	29389	30051	R	encoded by transcript ACA1_146470A; MORN repeatcontaining protein	complement(join(29389..29512,29614..29744,29794..29945,30012..30051))	Acanthamoeba castellanii str. Neff	14917213
ACA1_146480	CDS	ACA1_146480	NW_004457429.1	30512	32051	R	encoded by transcript ACA1_146480A; pantothenate kinase, putative	complement(join(30512..30835,30898..31025,31096..31240,31412..31489,31568..31702,31776..32051))	Acanthamoeba castellanii str. Neff	14917214
ACA1_146490	CDS	ACA1_146490	NW_004457429.1	32147	32946	R	encoded by transcript ACA1_146490A; cell wall anchor domain containing protein	complement(join(32147..32383,32467..32946))	Acanthamoeba castellanii str. Neff	14917215
ACA1_146500	CDS	ACA1_146500	NW_004457429.1	33379	36981	R	encoded by transcript ACA1_146500A; RhoGEF domain containing protein	complement(join(33379..33439,33518..33657,33726..33820,33909..34008,34088..34184,34266..34345,34436..34522,34617..34709,34783..34866,34941..35021,35117..35221,35312..35616,35709..35786,35905..35995,36087..36218,36330..36413,36493..36575,36679..36823,36910..36981))	Acanthamoeba castellanii str. Neff	14917203
ACA1_146510	CDS	ACA1_146510	NW_004457429.1	37347	38546	R	encoded by transcript ACA1_146510A; uncharacterized protein	complement(join(37347..37409,37489..37533,37613..37711,37797..37982,38061..38546))	Acanthamoeba castellanii str. Neff	14917204
ACA1_146520	CDS	ACA1_146520	NW_004457429.1	39313	41410	D	encoded by transcript ACA1_146520A; uncharacterized protein	join(39313..39766,39863..40020,40103..40188,40264..40342,40414..40530,40613..40675,40792..40896,40975..41052,41126..41215,41294..41410)	Acanthamoeba castellanii str. Neff	14917205
ACA1_146530	CDS	ACA1_146530	NW_004457429.1	42187	46343	D	encoded by transcript ACA1_146530A; Mak10 subunit, NatC N(alpha)terminal acetyltransferase	join(42187..42227,42435..42538,42628..42695,42834..42974,43057..43139,43216..43273,43374..43478,43552..43618,43697..43776,43855..43970,44052..44102,44213..44335,44424..44532,44619..44690,44771..44839,44944..45000,45081..45158,45243..45299,45375..45558,45668..45727,45789..45943,46043..46104,46154..46343)	Acanthamoeba castellanii str. Neff	14917206
ACA1_146540	CDS	ACA1_146540	NW_004457429.1	46983	49481	D	encoded by transcript ACA1_146540A; AMPdependent synthetase and ligase	join(46983..47162,47244..47352,47443..47552,47640..47867,48019..48186,48266..48392,48467..48593,48662..48771,48832..48969,49053..49153,49224..49481)	Acanthamoeba castellanii str. Neff	14917207
ACA1_146550	CDS	ACA1_146550	NW_004457429.1	49536	56356	R	encoded by transcript ACA1_146550A; protein kinase domain containing protein	complement(join(49536..50105,50192..50522,50623..50722,50794..51009,51174..51348,51431..51519,51591..51724,51819..52035,52106..52165,52244..52334,52416..52554,52630..52692,52779..52861,52966..53087,53170..53269,53349..53435,53497..53552,53615..53681,53747..53812,53902..54034,54112..54213,54306..54459,54540..54619,54692..54786,54854..54946,55014..55116,55183..55241,55320..55486,55586..55678,55974..56108,56281..56356))	Acanthamoeba castellanii str. Neff	14917208
ACA1_146560	CDS	ACA1_146560	NW_004457429.1	57619	58072	D	encoded by transcript ACA1_146560A; uncharacterized protein	join(57619..57698,57901..58072)	Acanthamoeba castellanii str. Neff	14917209
ACA1_146570	CDS	ACA1_146570	NW_004457429.1	58135	59674	D	encoded by transcript ACA1_146570A; Ceramidase	join(58135..58210,58275..58529,58656..58935,59020..59139,59227..59674)	Acanthamoeba castellanii str. Neff	14917216
ACA1_146580	CDS	ACA1_146580	NW_004457429.1	59814	60764	D	encoded by transcript ACA1_146580A; uncharacterized protein	join(59814..59838,59934..60007,60088..60298,60421..60488,60558..60764)	Acanthamoeba castellanii str. Neff	14917217
ACA1_146590	CDS	ACA1_146590	NW_004457429.1	60820	62346	R	encoded by transcript ACA1_146590A; uncharacterized protein	complement(join(60820..61005,61080..61175,61302..61449,61547..61610,61691..61783,61866..62346))	Acanthamoeba castellanii str. Neff	14917218
ACA1_146600	CDS	ACA1_146600	NW_004457429.1	62575	68880	R	encoded by transcript ACA1_146600A; protein kinase domain containing protein	complement(join(62575..62661,62736..62967,63085..63465,63602..63808,63914..64022,64125..64470,64560..65025,65117..65349,65465..65583,65664..65763,65855..65941,66012..66067,66167..66336,66431..66495,66570..66711,66782..66938,67045..67386,67470..67549,67620..67764,67919..68002,68086..68166,68265..68369,68682..68880))	Acanthamoeba castellanii str. Neff	14917219
ACA1_146610	CDS	ACA1_146610	NW_004457429.1	69463	76281	D	encoded by transcript ACA1_146610A; protein kinase domain containing protein	join(69463..69643,69945..70004,70257..70358,70443..70523,70627..70710,70823..70976,71056..71114,71196..71251,71417..71705,71799..71955,72045..72186,72265..72426,72495..72564,72653..72708,72797..72883,72983..73082,73177..73295,73415..73647,73754..74219,74347..74692,74842..74950,75057..75263,75406..75786,75859..76090,76174..76281)	Acanthamoeba castellanii str. Neff	14917220
ACA1_146620	CDS	ACA1_146620	NW_004457429.1	76385	77025	R	encoded by transcript ACA1_146620A; uncharacterized protein	complement(join(76385..76469,76560..76617,76693..76879,76984..77025))	Acanthamoeba castellanii str. Neff	14917221
ACA1_146630	CDS	ACA1_146630	NW_004457429.1	77182	80940	D	encoded by transcript ACA1_146630A; uncharacterized protein	join(77182..77644,77742..77799,77888..78024,78150..78314,78382..78470,78580..78631,78717..78784,78817..78973,79053..79142,79213..79305,79388..79486,79586..79740,79820..80129,80225..80329,80430..80566,80686..80756,80850..80940)	Acanthamoeba castellanii str. Neff	14917222
ACA1_146640	CDS	ACA1_146640	NW_004457429.1	81104	83455	R	encoded by transcript ACA1_146640A; uncharacterized protein	complement(join(81104..81667,81743..81916,81982..82341,82403..82517,82594..82750,82837..82969,83038..83168,83269..83455))	Acanthamoeba castellanii str. Neff	14917223
ACA1_146660	CDS	ACA1_146660	NW_004457429.1	85007	87638	R	encoded by transcript ACA1_146660A; uncharacterized protein	complement(join(85007..85114,85235..85320,85381..85572,85658..85725,85780..85868,85950..86002,86126..86260,86363..86453,86568..86661,86743..86854,87004..87097,87206..87279,87429..87518,87620..87638))	Acanthamoeba castellanii str. Neff	14917225
ACA1_001860	CDS	ACA1_001860	NW_004457428.1	4365	4676	D	encoded by transcript ACA1_001860A; uncharacterized protein	join(4365..4468,4562..4676)	Acanthamoeba castellanii str. Neff	14917191
ACA1_001870	CDS	ACA1_001870	NW_004457428.1	4857	5251	D	encoded by transcript ACA1_001870A; histone cluster 1, H2bb, putative	join(4857..5015,5093..5251)	Acanthamoeba castellanii str. Neff	14917192
ACA1_001980	CDS	ACA1_001980	NW_004457428.1	12003	12533	D	encoded by transcript ACA1_001980A; uncharacterized protein	join(12003..12113,12183..12533)	Acanthamoeba castellanii str. Neff	14917193
ACA1_001990	CDS	ACA1_001990	NW_004457428.1	12814	13417	D	encoded by transcript ACA1_001990A; aldoketo reductase family 7, member A3 isoform 2, putative	join(12814..12834,12931..13366,13398..13417)	Acanthamoeba castellanii str. Neff	14917194
ACA1_348950	CDS	ACA1_348950	NW_004457427.1	12645	17906	R	encoded by transcript ACA1_348950A; ubiquitin domain containing protein	complement(join(12645..12841,12916..13075,13157..13251,13365..13549,13661..13731,13777..13824,13982..14293,14397..14500,14645..14752,14845..14938,15043..15189,15279..15406,15480..15586,15681..15797,15893..16015,16170..16297,16459..16524,16684..16861,16954..17081,17183..17253,17447..17516,17593..17753,17822..17906))	Acanthamoeba castellanii str. Neff	14917184
ACA1_348960	CDS	ACA1_348960	NW_004457427.1	18276	20119	R	encoded by transcript ACA1_348960A; GATA zinc finger domain containing protein	complement(join(18276..18353,18422..18530,18638..18732,18817..19072,19180..19385,19549..19713,19835..20119))	Acanthamoeba castellanii str. Neff	14917190
ACA1_348970	CDS	ACA1_348970	NW_004457427.1	20512	22879	D	encoded by transcript ACA1_348970A; UBA/TSN domain containing protein	join(20512..20946,21075..21203,21301..22092,22186..22278,22381..22493,22578..22698,22775..22879)	Acanthamoeba castellanii str. Neff	14917183
ACA1_348980	CDS	ACA1_348980	NW_004457427.1	23010	23643	D	encoded by transcript ACA1_348980A; 3hydroxyanthranilate 3,4-dioxygenase	join(23010..23107,23202..23268,23353..23478,23572..>23643)	Acanthamoeba castellanii str. Neff	14917185
ACA1_349090	CDS	ACA1_349090	NW_004457427.1	26248	27737	R	encoded by transcript ACA1_349090A; 3'5' exonuclease domain containing protein	complement(join(26248..26283,26297..26583,26686..27172,27288..27737))	Acanthamoeba castellanii str. Neff	14917186
ACA1_349100	CDS	ACA1_349100	NW_004457427.1	27964	29515	R	encoded by transcript ACA1_349100A; TraB subfamily protein	complement(join(27964..28178,28207..28372,28386..28436,28468..28560,28677..28792,28875..29137,29230..29362,29455..29515))	Acanthamoeba castellanii str. Neff	14917187
ACA1_349110	CDS	ACA1_349110	NW_004457427.1	29548	29918	R	encoded by transcript ACA1_349110A; uncharacterized protein	complement(join(29548..29651,29762..29918))	Acanthamoeba castellanii str. Neff	14917188
ACA1_349120	CDS	ACA1_349120	NW_004457427.1	30170	32339	R	encoded by transcript ACA1_349120A; TraB subfamily protein	complement(join(30170..30243,30416..30524,30550..30813,30950..31102,31204..31296,31411..31526,31609..31906,32028..32339))	Acanthamoeba castellanii str. Neff	14917189
ACA1_307000	CDS	ACA1_307000	NW_004457426.1	1269	1692	R	encoded by transcript ACA1_307000A; uncharacterized protein	complement(join(1269..1478,1540..1692))	Acanthamoeba castellanii str. Neff	14917182
ACA1_307010	CDS	ACA1_307010	NW_004457426.1	2403	2828	R	encoded by transcript ACA1_307010A; uncharacterized protein	complement(join(2403..2589,2713..2828))	Acanthamoeba castellanii str. Neff	14917178
ACA1_307020	CDS	ACA1_307020	NW_004457426.1	4649	5041	R	encoded by transcript ACA1_307020A; uncharacterized protein	complement(join(4649..4811,4839..5041))	Acanthamoeba castellanii str. Neff	14917179
ACA1_307130	CDS	ACA1_307130	NW_004457426.1	8510	8825	D	encoded by transcript ACA1_307130A; sensor/response regulator hybrid protein	join(8510..8623,8691..8825)	Acanthamoeba castellanii str. Neff	14917180
ACA1_307140	CDS	ACA1_307140	NW_004457426.1	9529	9954	R	encoded by transcript ACA1_307140A; uncharacterized protein	complement(9529..9954)	Acanthamoeba castellanii str. Neff	14917181
ACA1_002300	CDS	ACA1_002300	NW_004457425.1	897	6184	D	encoded by transcript ACA1_002300A; pyruvate carboxylase	join(897..1128,1334..1415,1529..1685,1759..1866,1941..2003,2085..2264,2340..2445,2550..2657,2737..3075,3147..3342,3439..3554,3630..3834,3915..4171,4249..4421,4501..4725,4821..4935,5030..5156,5236..5560,5669..6184)	Acanthamoeba castellanii str. Neff	14917175
ACA1_002310	CDS	ACA1_002310	NW_004457425.1	6355	7569	R	encoded by transcript ACA1_002310A; uncharacterized protein	complement(join(6355..6399,6413..6528,6609..6722,6826..6995,7209..7360,7417..7437,7531..7569))	Acanthamoeba castellanii str. Neff	14917177
ACA1_002320	CDS	ACA1_002320	NW_004457425.1	8384	10891	D	encoded by transcript ACA1_002320A; Fbox domain containing protein	join(8384..9130,9236..9356,9465..9599,9664..9794,9878..9991,10095..10244,10313..10409,10485..10657,10748..10891)	Acanthamoeba castellanii str. Neff	14917176
ACA1_002330	CDS	ACA1_002330	NW_004457425.1	11108	12160	R	encoded by transcript ACA1_002330A; UDPGal:betaGal beta 1,3-galactosyltransferase polypeptide 6, putative	complement(join(11108..11739,11872..12160))	Acanthamoeba castellanii str. Neff	14917174
ACA1_033890	CDS	ACA1_033890	NW_004457424.1	308	778	R	encoded by transcript ACA1_033890A; uncharacterized protein	complement(join(308..419,535..617,713..778))	Acanthamoeba castellanii str. Neff	14917164
ACA1_033900	CDS	ACA1_033900	NW_004457424.1	1298	2152	R	encoded by transcript ACA1_033900A; uncharacterized protein	complement(1298..2152)	Acanthamoeba castellanii str. Neff	14917172
ACA1_033910	CDS	ACA1_033910	NW_004457424.1	2367	3495	R	encoded by transcript ACA1_033910A; uncharacterized protein	complement(join(<2367..2566,2672..2763,2838..2918,2986..3063,3155..3226,3300..3348,3438..>3495))	Acanthamoeba castellanii str. Neff	14917173
ACA1_034020	CDS	ACA1_034020	NW_004457424.1	6067	6348	D	encoded by transcript ACA1_034020A; RNA binding protein	6067..6348	Acanthamoeba castellanii str. Neff	14917154
ACA1_034030	CDS	ACA1_034030	NW_004457424.1	7445	9569	D	encoded by transcript ACA1_034030A; RNA recognition motif domain containing protein	join(7445..7755,7857..7932,8007..8148,8166..8353,8443..8537,8639..8712,8835..8888,8999..9067,9181..9347,9471..9569)	Acanthamoeba castellanii str. Neff	14917155
ACA1_034040	CDS	ACA1_034040	NW_004457424.1	9771	10794	D	encoded by transcript ACA1_034040A; ankyrin repeat-containing protein	join(9771..9926,9993..10085,10172..10532,10625..10794)	Acanthamoeba castellanii str. Neff	14917156
ACA1_034050	CDS	ACA1_034050	NW_004457424.1	11360	12062	R	encoded by transcript ACA1_034050A; EF hand domain containing protein	complement(join(11360..11587,11757..12062))	Acanthamoeba castellanii str. Neff	14917157
ACA1_034060	CDS	ACA1_034060	NW_004457424.1	12299	13022	D	encoded by transcript ACA1_034060A; uncharacterized protein	join(12299..12352,12461..12552,12626..12761,12927..13022)	Acanthamoeba castellanii str. Neff	14917158
ACA1_034070	CDS	ACA1_034070	NW_004457424.1	13156	15403	D	encoded by transcript ACA1_034070A; uncharacterized protein	join(13156..13212,13349..13549,13710..14252,14319..14383,14519..14702,14820..14905,14978..15106,15316..15403)	Acanthamoeba castellanii str. Neff	14917159
ACA1_034080	CDS	ACA1_034080	NW_004457424.1	15563	20631	R	encoded by transcript ACA1_034080A; RhoGEF domain containing protein	complement(join(15563..15727,15828..16030,16124..16302,16391..16527,16753..16826,16959..17049,17171..17310,17393..17502,17608..17678,17805..17900,18075..18179,18287..18436,18723..18811,18961..19033,19127..19288,19395..19436,19532..20227,20404..20631))	Acanthamoeba castellanii str. Neff	14917160
ACA1_034090	CDS	ACA1_034090	NW_004457424.1	20931	24498	R	encoded by transcript ACA1_034090A; protein kinase domain containing protein	complement(join(20931..21671,21750..21976,22071..22218,22308..22446,22560..22846,22990..23174,23256..24498))	Acanthamoeba castellanii str. Neff	14917161
ACA1_034100	CDS	ACA1_034100	NW_004457424.1	25060	25540	D	encoded by transcript ACA1_034100A; uncharacterized protein	join(25060..25152,25250..25540)	Acanthamoeba castellanii str. Neff	14917162
ACA1_034110	CDS	ACA1_034110	NW_004457424.1	25924	26717	R	encoded by transcript ACA1_034110A; uncharacterized protein	complement(join(25924..26146,26221..26295,26356..26454,26521..26608,26678..26717))	Acanthamoeba castellanii str. Neff	14917163
ACA1_034120	CDS	ACA1_034120	NW_004457424.1	26934	29312	D	encoded by transcript ACA1_034120A; RNA methyltransferase, TrmH superfamily protein	join(26934..27414,27509..27587,27746..27839,27927..28003,28131..28216,28313..28370,28458..28529,28654..28739,28989..29077,29160..29312)	Acanthamoeba castellanii str. Neff	14917165
ACA1_034130	CDS	ACA1_034130	NW_004457424.1	29404	32361	R	encoded by transcript ACA1_034130A; solute carrier family protein	complement(join(29404..30050,30134..30205,30301..30424,30493..30587,30705..31016,31125..31324,31407..31592,31680..31762,31864..31888,31985..32075,32175..32361))	Acanthamoeba castellanii str. Neff	14917166
ACA1_034140	CDS	ACA1_034140	NW_004457424.1	32787	34807	R	encoded by transcript ACA1_034140A; urea transporter, putative	complement(join(32787..32927,33010..33085,33147..33253,33332..33432,33501..33663,33727..33769,33854..33951,34008..34120,34180..34215,34303..34393,34458..34540,34612..34807))	Acanthamoeba castellanii str. Neff	14917167
ACA1_034150	CDS	ACA1_034150	NW_004457424.1	35364	36612	R	encoded by transcript ACA1_034150A; uncharacterized protein	complement(join(35364..35650,35724..35853,35925..36121,36183..36366,36472..36612))	Acanthamoeba castellanii str. Neff	14917168
ACA1_034160	CDS	ACA1_034160	NW_004457424.1	36859	38381	D	encoded by transcript ACA1_034160A; FERM central domain containing protein	join(36859..37054,37170..37460,37551..37645,37670..37868,37948..38129,38199..38381)	Acanthamoeba castellanii str. Neff	14917169
ACA1_034170	CDS	ACA1_034170	NW_004457424.1	38897	45237	D	encoded by transcript ACA1_034170A; phospholipidtranslocating P-type ATPase, putative	join(38897..39220,39297..39347,39414..39512,39582..39787,39865..39947,40023..40138,40201..40424,40507..40642,40705..40800,40881..41072,41158..41326,41406..41509,41592..41718,41783..41859,41923..42072,42114..42260,42342..42448,42525..42655,42824..42946,43028..43147,43221..43463,43537..43748,43821..43970,44065..44424,44502..44620,44695..44828,44918..45237)	Acanthamoeba castellanii str. Neff	14917170
ACA1_104670	CDS	ACA1_104670	NW_004457423.1	133	594	R	encoded by transcript ACA1_104670A; Aldehyde dehydrogenase, putative	complement(join(133..158,239..298,384..594))	Acanthamoeba castellanii str. Neff	14917147
ACA1_104780	CDS	ACA1_104780	NW_004457423.1	820	942	D	encoded by transcript ACA1_104780A; uncharacterized protein	<820..942	Acanthamoeba castellanii str. Neff	14917153
ACA1_104790	CDS	ACA1_104790	NW_004457423.1	1376	2154	D	encoded by transcript ACA1_104790A; uncharacterized protein	join(1376..1688,1782..1892,1991..2154)	Acanthamoeba castellanii str. Neff	14917148
ACA1_104800	CDS	ACA1_104800	NW_004457423.1	2647	3187	R	encoded by transcript ACA1_104800A; aldehyde dehydrogenase	complement(join(2647..2698,2774..2858,2961..3058,3141..>3187))	Acanthamoeba castellanii str. Neff	14917149
ACA1_104910	CDS	ACA1_104910	NW_004457423.1	7540	9358	R	encoded by transcript ACA1_104910A; uncharacterized protein	complement(join(7540..7548,7651..7739,7835..7975,8035..8107,8196..8347,8445..8631,8732..9358))	Acanthamoeba castellanii str. Neff	14917150
ACA1_104920	CDS	ACA1_104920	NW_004457423.1	9661	10154	R	encoded by transcript ACA1_104920A; uncharacterized protein	complement(join(9661..9683,9722..10154))	Acanthamoeba castellanii str. Neff	14917151
ACA1_105030	CDS	ACA1_105030	NW_004457423.1	15672	16040	D	encoded by transcript ACA1_105030A; uncharacterized protein	join(15672..15809,15918..>16040)	Acanthamoeba castellanii str. Neff	14917152
ACA1_020770	CDS	ACA1_020770	NW_004457422.1	415	4603	D	encoded by transcript ACA1_020770A; multisensor hybrid histidine kinase	join(415..546,796..982,1126..1272,1387..1508,1659..1913,2066..2158,2244..2418,2560..2696,2842..2994,3072..3317,3437..3508,3615..3809,3920..4068,4138..4603)	Acanthamoeba castellanii str. Neff	14917143
ACA1_020780	CDS	ACA1_020780	NW_004457422.1	5078	8509	R	encoded by transcript ACA1_020780A; Longchain-fatty-acid--CoA ligase 1, putative	complement(join(5078..5338,5439..5586,5695..5805,5924..6047,6214..6332,6429..6543,6676..6859,6954..7212,7260..7444,7544..7620,7730..7835,7937..8093,8211..8509))	Acanthamoeba castellanii str. Neff	14917138
ACA1_020790	CDS	ACA1_020790	NW_004457422.1	9295	10154	D	encoded by transcript ACA1_020790A; uncharacterized protein	join(9295..9340,9395..9535,9610..9681,9796..9867,9994..10154)	Acanthamoeba castellanii str. Neff	14917139
ACA1_020800	CDS	ACA1_020800	NW_004457422.1	10369	13744	D	encoded by transcript ACA1_020800A; tetratricopeptide repeat domain containing protein	join(10369..10442,10597..10645,10710..10834,10901..10939,10999..11127,11245..11311,11541..11658,11715..11797,11859..11989,12050..12184,12284..12305,12369..12479,12663..12746,12817..12883,13119..13260,13359..13448,13579..13585,13637..13744)	Acanthamoeba castellanii str. Neff	14917140
ACA1_020810	CDS	ACA1_020810	NW_004457422.1	13717	14344	R	encoded by transcript ACA1_020810A; uncharacterized protein	complement(join(13717..13926,14042..14344))	Acanthamoeba castellanii str. Neff	14917141
ACA1_020820	CDS	ACA1_020820	NW_004457422.1	14554	15546	D	encoded by transcript ACA1_020820A; TATAbox-binding protein	join(14554..14810,14928..15276,15376..15546)	Acanthamoeba castellanii str. Neff	14917142
ACA1_020830	CDS	ACA1_020830	NW_004457422.1	15963	19019	R	encoded by transcript ACA1_020830A; amino acid permease, putative	complement(join(15963..16126,16273..16426,16783..16858,16993..17160,17271..17383,17509..17600,17689..17944,18020..18201,18302..18457,18592..18738,18911..19019))	Acanthamoeba castellanii str. Neff	14917128
ACA1_020840	CDS	ACA1_020840	NW_004457422.1	16793	18608	D	encoded by transcript ACA1_020840A; uncharacterized protein	join(16793..16866,17028..17118,17694..17948,18038..18160,18312..18446,18588..18608)	Acanthamoeba castellanii str. Neff	14917130
ACA1_020850	CDS	ACA1_020850	NW_004457422.1	19638	25819	R	encoded by transcript ACA1_020850A; RasGEF domain containing protein	complement(join(19638..19700,19761..19837,19947..20111,20247..20343,20450..20539,20661..20744,20832..20897,20985..21213,21315..21551,21649..24028,24277..25819))	Acanthamoeba castellanii str. Neff	14917129
ACA1_020860	CDS	ACA1_020860	NW_004457422.1	27182	28834	D	encoded by transcript ACA1_020860A; mitochondrial ribosomal protein, L38, putative	join(27182..27478,27560..27637,27891..27963,28053..28152,28268..28347,28434..28535,28650..28834)	Acanthamoeba castellanii str. Neff	14917131
ACA1_020870	CDS	ACA1_020870	NW_004457422.1	29103	30427	D	encoded by transcript ACA1_020870A; large conductance mechanosensitive channel protein	join(29103..29288,29390..29432,29520..29634,29721..29829,29977..30081,30173..30427)	Acanthamoeba castellanii str. Neff	14917132
ACA1_020880	CDS	ACA1_020880	NW_004457422.1	30690	31518	D	encoded by transcript ACA1_020880A; protozoan/cyanobacterial globin family subfamily protein	join(30690..30828,30927..31114,31213..31518)	Acanthamoeba castellanii str. Neff	14917133
ACA1_020900	CDS	ACA1_020900	NW_004457422.1	33267	35774	R	encoded by transcript ACA1_020900A; Fbox domain containing protein	complement(join(33267..33308,33521..33591,33658..33763,33861..33949,34056..34134,34306..34451,34546..34586,34705..34780,34848..34959,35035..35104,35244..35395,35643..35774))	Acanthamoeba castellanii str. Neff	14917135
ACA1_020910	CDS	ACA1_020910	NW_004457422.1	36313	42578	D	encoded by transcript ACA1_020910A; RhoGEF domain containing protein	join(36313..36334,36596..37740,37819..37932,38005..38159,38241..38748,38845..39340,39431..39567,39729..39838,39934..40106,40185..40387,40504..40669,40995..41260,41354..41557,41658..41800,41913..42033,42227..42359,42451..42578)	Acanthamoeba castellanii str. Neff	14917136
ACA1_020920	CDS	ACA1_020920	NW_004457422.1	43252	44366	D	encoded by transcript ACA1_020920A; uncharacterized protein	join(43252..43810,43907..44072,44168..44366)	Acanthamoeba castellanii str. Neff	14917137
ACA1_020930	CDS	ACA1_020930	NW_004457422.1	44576	45587	R	encoded by transcript ACA1_020930A; dual specificity phosphatase, catalytic domain containing protein	complement(join(44576..44711,44826..44893,44977..45047,45194..45331,45476..45587))	Acanthamoeba castellanii str. Neff	14917144
ACA1_020940	CDS	ACA1_020940	NW_004457422.1	46567	49802	D	encoded by transcript ACA1_020940A; Ankyrin repeat and Fbox domain containing protein	join(46567..46752,46856..46926,47019..47332,47411..47559,47679..47826,47943..48079,48236..48472,48561..48644,48757..48841,48929..48997,49101..49231,49295..49381,49557..49593,49705..49802)	Acanthamoeba castellanii str. Neff	14917145
ACA1_020950	CDS	ACA1_020950	NW_004457422.1	50120	51876	R	encoded by transcript ACA1_020950A; Armadillo/betacatenin-like repeat domain containing protein	complement(join(50120..50253,50348..50467,50602..50785,50875..50978,51110..51235,51439..51561,51735..>51876))	Acanthamoeba castellanii str. Neff	14917146
ACA1_028650	CDS	ACA1_028650	NW_004457421.1	614	2083	R	encoded by transcript ACA1_028650A; Peroxin 19 (Pex19), putative	complement(join(614..729,872..923,1047..1125,1225..1280,1465..1886,2050..2083))	Acanthamoeba castellanii str. Neff	14917117
ACA1_028670	CDS	ACA1_028670	NW_004457421.1	5146	6767	D	encoded by transcript ACA1_028670A; protein phosphatase 6, catalytic subunit isoform a, putative	join(5146..5229,5379..5525,5601..5668,5739..5892,6139..6184,6268..6431,6516..6767)	Acanthamoeba castellanii str. Neff	14917124
ACA1_028680	CDS	ACA1_028680	NW_004457421.1	7647	10364	D	encoded by transcript ACA1_028680A; protein kinase domain containing protein	join(7647..7674,7780..7892,8043..8107,8234..8377,8520..8610,8711..8826,8924..9001,9126..9159,9259..9343,9452..9513,9609..10364)	Acanthamoeba castellanii str. Neff	14917125
ACA1_028690	CDS	ACA1_028690	NW_004457421.1	10607	12742	R	encoded by transcript ACA1_028690A; hydrolase, alpha/beta fold domain containing protein	complement(join(10607..10731,10861..11057,11139..11198,11260..11340,11430..11560,11668..11939,12045..12153,12398..12472,12626..12742))	Acanthamoeba castellanii str. Neff	14917126
ACA1_028700	CDS	ACA1_028700	NW_004457421.1	13599	20453	D	encoded by transcript ACA1_028700A; RhoGEF domain containing protein	join(13599..13703,13846..13913,14049..14118,14289..14342,14443..14504,14592..14755,14945..15082,15166..15284,15343..15440,15547..15616,15713..15814,15966..16113,16179..16321,16425..16557,16646..17698,17803..17882,17948..18106,18175..18400,18526..18629,18714..18893,18986..19173,19262..19457,19540..19581,19676..19741,19812..19887,19991..20067,20164..20271,20364..20453)	Acanthamoeba castellanii str. Neff	14917127
ACA1_028710	CDS	ACA1_028710	NW_004457421.1	20631	20938	R	encoded by transcript ACA1_028710A; uncharacterized protein	complement(join(20631..20683,20803..20938))	Acanthamoeba castellanii str. Neff	14917119
ACA1_028720	CDS	ACA1_028720	NW_004457421.1	21528	23071	R	encoded by transcript ACA1_028720A; zinc finger, C3HC4 type (RING finger) domain containing protein	complement(join(21528..21647,21729..21856,21939..22067,22145..22213,22330..22405,22521..22637,22741..22853,22927..23071))	Acanthamoeba castellanii str. Neff	14917120
ACA1_028730	CDS	ACA1_028730	NW_004457421.1	23360	24849	R	encoded by transcript ACA1_028730A; uncharacterized protein	complement(join(23360..23422,23538..23653,23751..23834,23918..24042,24146..24849))	Acanthamoeba castellanii str. Neff	14917121
ACA1_028740	CDS	ACA1_028740	NW_004457421.1	25363	27189	D	encoded by transcript ACA1_028740A; uncharacterized protein	join(<25363..25456,25554..25594,25685..25741,25828..25971,26295..26540,26834..26906,27008..27048,27137..>27189)	Acanthamoeba castellanii str. Neff	14917122
ACA1_028850	CDS	ACA1_028850	NW_004457421.1	30726	31082	D	encoded by transcript ACA1_028850A; uncharacterized protein	<30726..31082	Acanthamoeba castellanii str. Neff	14917123
ACA1_028960	CDS	ACA1_028960	NW_004457421.1	31979	36265	D	encoded by transcript ACA1_028960A; nucleotide exchange factor RasGEF, putative	join(31979..32273,33169..33263,33323..33619,34461..34483,34506..34693,34770..34908,34996..35149,35543..35713,35798..35914,36018..36115,36187..>36265)	Acanthamoeba castellanii str. Neff	14917116
ACA1_359580	CDS	ACA1_359580	NW_004457420.1	13129	14675	R	encoded by transcript ACA1_359580A; EGFlike domain containing protein	complement(join(13129..13196,13286..14095,14174..14282,14386..14520,14583..14675))	Acanthamoeba castellanii str. Neff	14917114
ACA1_359590	CDS	ACA1_359590	NW_004457420.1	15067	17906	R	encoded by transcript ACA1_359590A; uncharacterized protein	complement(join(15067..15135,15196..15308,15431..15647,15742..15900,16067..16122,16199..16328,16418..16761,16889..17153,17244..17407,17513..17644,17734..17792,17878..17906))	Acanthamoeba castellanii str. Neff	14917115
ACA1_009480	CDS	ACA1_009480	NW_004457419.1	520	5713	D	encoded by transcript ACA1_009480A; calponin domain containing protein	join(520..813,934..1000,1084..1157,1240..1341,3103..3174,3277..3411,3538..3648,3831..3893,5336..5480,5500..5516,5642..5713)	Acanthamoeba castellanii str. Neff	14917112
ACA1_009790	CDS	ACA1_009790	NW_004457419.1	11969	12492	D	encoded by transcript ACA1_009790A; uncharacterized protein	join(<11969..12128,12188..12300,12361..12492)	Acanthamoeba castellanii str. Neff	14917113
ACA1_320520	CDS	ACA1_320520	NW_004457418.1	45	2934	R	encoded by transcript ACA1_320520A; uncharacterized protein	complement(join(<45..331,468..634,735..865,991..1100,1216..2499,2637..2934))	Acanthamoeba castellanii str. Neff	14917105
ACA1_320530	CDS	ACA1_320530	NW_004457418.1	3924	6951	R	encoded by transcript ACA1_320530A; protein kinase domain containing protein	complement(join(3924..3950,3999..4201,4351..4412,4504..4585,4679..4742,4811..4901,5087..5164,5250..5331,5464..5596,5716..6634,6755..6951))	Acanthamoeba castellanii str. Neff	14917101
ACA1_320540	CDS	ACA1_320540	NW_004457418.1	7496	9006	R	encoded by transcript ACA1_320540A; calponin domain containing protein	complement(join(7496..7554,7657..7741,7899..7968,8087..8164,8334..8426,8518..8595,8906..9006))	Acanthamoeba castellanii str. Neff	14917102
ACA1_320550	CDS	ACA1_320550	NW_004457418.1	9395	11368	R	encoded by transcript ACA1_320550A; prolyl aminopeptidase	complement(join(9395..9471,9550..9600,9708..9804,9918..10044,10178..10293,10462..10566,10668..10802,10910..10994,11087..11200,11283..11368))	Acanthamoeba castellanii str. Neff	14917103
ACA1_320560	CDS	ACA1_320560	NW_004457418.1	11576	13836	D	encoded by transcript ACA1_320560A; Znfinger in Ran binding protein and others domain containing protein	join(11576..11711,11849..12000,12209..12271,12372..12468,12921..13539,13650..13836)	Acanthamoeba castellanii str. Neff	14917099
ACA1_320570	CDS	ACA1_320570	NW_004457418.1	13858	19018	D	encoded by transcript ACA1_320570A; Znfinger in Ran binding protein and others domain containing protein	join(13858..13878,13967..14095,14238..14292,14403..14518,14744..14783,14918..15051,15234..15312,15487..15555,15701..15796,15991..16085,16207..16275,16379..16493,16630..16697,16835..16906,17096..17173,17203..17297,18001..18023,18158..18207,18414..18519,18780..18827,18948..19018)	Acanthamoeba castellanii str. Neff	14917100
ACA1_320780	CDS	ACA1_320780	NW_004457418.1	19205	20686	D	encoded by transcript ACA1_320780A; uncharacterized protein	join(19205..19643,19762..19799,20036..20197,20295..20326,20428..20686)	Acanthamoeba castellanii str. Neff	14917106
ACA1_320790	CDS	ACA1_320790	NW_004457418.1	20839	23760	R	encoded by transcript ACA1_320790A; RUN domain containing protein	complement(join(20839..21163,21343..21487,21768..22059,22288..22475,22608..22658,22829..22914,23074..23173,23252..23316,23427..23487,23556..23760))	Acanthamoeba castellanii str. Neff	14917107
ACA1_320800	CDS	ACA1_320800	NW_004457418.1	23991	24367	R	encoded by transcript ACA1_320800A; uncharacterized protein	complement(join(23991..24010,24103..24367))	Acanthamoeba castellanii str. Neff	14917108
ACA1_320810	CDS	ACA1_320810	NW_004457418.1	24952	28514	D	encoded by transcript ACA1_320810A; uncharacterized protein	join(24952..25091,25265..25290,25406..25573,25731..25879,26031..26108,26314..26650,26801..26898,27130..27154,27293..27455,27649..27698,27857..27980,28104..28191,28353..28514)	Acanthamoeba castellanii str. Neff	14917109
ACA1_320820	CDS	ACA1_320820	NW_004457418.1	28846	29498	D	encoded by transcript ACA1_320820A; uncharacterized protein	join(28846..28962,29088..29287,29396..29498)	Acanthamoeba castellanii str. Neff	14917110
ACA1_320830	CDS	ACA1_320830	NW_004457418.1	30058	32381	D	encoded by transcript ACA1_320830A; uncharacterized protein	join(30058..30103,30175..30264,30366..30476,30625..30720,30844..30926,31127..31255,31356..31455,31559..31631,31754..31878,32019..32157,32258..32381)	Acanthamoeba castellanii str. Neff	14917111
ACA1_320840	CDS	ACA1_320840	NW_004457418.1	32765	37513	D	encoded by transcript ACA1_320840A; HSP91 (Heat shock protein 91), putative	join(32765..32871,33011..33068,33131..33271,33468..33624,33802..33995,34085..34222,34327..34430,34644..34720,34792..34929,35111..35240,35558..35747,35858..36031,36193..36294,36599..36742,36838..37056,37105..37275,37355..37513)	Acanthamoeba castellanii str. Neff	14917104
ACA1_352150	CDS	ACA1_352150	NW_004457417.1	140	936	D	encoded by transcript ACA1_352150A; uncharacterized protein	join(140..178,287..313,521..646,886..>936)	Acanthamoeba castellanii str. Neff	14917086
ACA1_352260	CDS	ACA1_352260	NW_004457417.1	1666	1830	R	encoded by transcript ACA1_352260A; uncharacterized protein	complement(1666..1830)	Acanthamoeba castellanii str. Neff	14917093
ACA1_352370	CDS	ACA1_352370	NW_004457417.1	2225	3847	D	encoded by transcript ACA1_352370A; oxidoreductase, short chain dehydrogenase/reductase superfamily protein	join(<2225..2343,2422..2512,2588..2699,2778..2824,2941..3070,3180..3253,3321..3388,3489..3639,3660..3673,3742..3847)	Acanthamoeba castellanii str. Neff	14917094
ACA1_352380	CDS	ACA1_352380	NW_004457417.1	5002	5658	R	encoded by transcript ACA1_352380A; uncharacterized protein	complement(join(5002..5118,5464..5658))	Acanthamoeba castellanii str. Neff	14917095
ACA1_352400	CDS	ACA1_352400	NW_004457417.1	8314	12953	R	encoded by transcript ACA1_352400A; glycosyl hydrolase domain containing protein	complement(join(8314..8547,8667..8804,8924..9042,9143..9233,9333..9409,9549..9684,9768..9863,9964..10112,10208..10261,10369..10479,10568..10633,10733..10841,10963..11074,11141..11319,11388..11531,11673..11751,11844..11917,12007..12044,12143..12233,12319..12379,12475..12512,12603..12680,12786..12953))	Acanthamoeba castellanii str. Neff	14917097
ACA1_352410	CDS	ACA1_352410	NW_004457417.1	13611	14507	D	encoded by transcript ACA1_352410A; FYVE zinc finger domain containing protein	join(13611..13991,14240..14306,14419..14507)	Acanthamoeba castellanii str. Neff	14917098
ACA1_352420	CDS	ACA1_352420	NW_004457417.1	14738	16304	R	encoded by transcript ACA1_352420A; Anamorsin, putative	complement(join(14738..14836,14933..15066,15192..15329,15420..15525,15620..15787,15878..16032,16157..16304))	Acanthamoeba castellanii str. Neff	14917087
ACA1_352430	CDS	ACA1_352430	NW_004457417.1	16463	18347	D	encoded by transcript ACA1_352430A; uncharacterized protein	join(16463..16807,16874..16947,17043..17523,17589..17723,17813..18205,18234..18347)	Acanthamoeba castellanii str. Neff	14917088
ACA1_352440	CDS	ACA1_352440	NW_004457417.1	18682	19263	D	encoded by transcript ACA1_352440A; Yippee putative zincbinding protein	join(18682..18780,18841..18884,18982..19090,19174..19263)	Acanthamoeba castellanii str. Neff	14917089
ACA1_352450	CDS	ACA1_352450	NW_004457417.1	19365	19625	D	encoded by transcript ACA1_352450A; uncharacterized protein	join(19365..19526,19584..19625)	Acanthamoeba castellanii str. Neff	14917090
ACA1_352460	CDS	ACA1_352460	NW_004457417.1	20138	26503	D	encoded by transcript ACA1_352460A; ABC2 type transporter superfamily protein	join(20138..20260,20298..20646,20719..20868,20957..21231,21276..21504,21587..22182,22258..22377,22467..22586,22794..22848,23001..23145,23260..23378,23468..23628,23728..23925,24026..24196,24282..24576,24651..24721,24830..24902,24984..25117,25213..25302,25380..25479,25566..25704,25774..26018,26129..26289,26387..26503)	Acanthamoeba castellanii str. Neff	14917091
ACA1_352470	CDS	ACA1_352470	NW_004457417.1	26748	27569	D	encoded by transcript ACA1_352470A; uncharacterized protein	26748..27569	Acanthamoeba castellanii str. Neff	14917092
ACA1_352480	CDS	ACA1_352480	NW_004457417.1	27593	29162	R	encoded by transcript ACA1_352480A; L1P family protein	complement(join(27593..27789,27910..28080,28169..28326,28433..28525,28628..28800,28941..29042,29127..29162))	Acanthamoeba castellanii str. Neff	14917082
ACA1_352500	CDS	ACA1_352500	NW_004457417.1	36659	38079	D	encoded by transcript ACA1_352500A; uncharacterized protein	join(36659..36814,36886..37219,37285..37359,37428..37573,37759..38079)	Acanthamoeba castellanii str. Neff	14917084
ACA1_352510	CDS	ACA1_352510	NW_004457417.1	38309	42997	D	encoded by transcript ACA1_352510A; TalinB, putative	join(38309..38530,38600..38769,38835..38988,39071..39192,39314..39436,39538..39820,39922..40017,40119..40233,40336..40547,40622..40777,40872..41000,41073..41234,41307..41444,41588..41899,41975..>42997)	Acanthamoeba castellanii str. Neff	14917085
ACA1_046970	CDS	ACA1_046970	NW_004457416.1	204	8795	D	encoded by transcript ACA1_046970A; FGGAP repeat domain containing protein	join(204..355,451..635,756..992,1121..1300,1556..2164,2289..2655,2667..2910,2979..3271,3283..3292,5244..5683,5976..6795,8031..8795)	Acanthamoeba castellanii str. Neff	14917077
ACA1_047290	CDS	ACA1_047290	NW_004457416.1	13041	17599	R	encoded by transcript ACA1_047290A; uncharacterized protein	complement(join(13041..14154,14304..14548,14692..14964,15137..15892,16027..16297,16467..16636,16775..17599))	Acanthamoeba castellanii str. Neff	14917076
ACA1_047400	CDS	ACA1_047400	NW_004457416.1	21253	22027	R	encoded by transcript ACA1_047400A; uncharacterized protein	complement(join(21253..21316,21390..21714,21949..22027))	Acanthamoeba castellanii str. Neff	14917067
ACA1_047410	CDS	ACA1_047410	NW_004457416.1	22094	22918	R	encoded by transcript ACA1_047410A; uncharacterized protein	complement(join(22094..22143,22184..22479,22620..22918))	Acanthamoeba castellanii str. Neff	14917065
ACA1_047520	CDS	ACA1_047520	NW_004457416.1	25386	26087	R	encoded by transcript ACA1_047520A; uncharacterized protein	complement(join(25386..25396,25634..25847,25980..26087))	Acanthamoeba castellanii str. Neff	14917066
ACA1_047630	CDS	ACA1_047630	NW_004457416.1	28602	35491	R	encoded by transcript ACA1_047630A; uncharacterized protein	complement(join(28602..29703,29794..30038,30188..30451,30592..31398,31507..31846,31936..32105,32200..32499,32584..33209,33354..33906,34049..34147,34357..34773,34871..35205,35338..35491))	Acanthamoeba castellanii str. Neff	14917073
ACA1_047640	CDS	ACA1_047640	NW_004457416.1	35955	43038	R	encoded by transcript ACA1_047640A; FGGAP repeat domain containing protein	complement(join(35955..35975,36005..36152,36281..36594,36737..37046,37122..37414,37521..38137,38355..38966,39280..39459,39594..39830,39953..40166,40277..40600,40768..41218,41318..41477,41614..41841,41971..42151,42412..42802,42950..43038))	Acanthamoeba castellanii str. Neff	14917074
ACA1_047650	CDS	ACA1_047650	NW_004457416.1	43386	43970	R	encoded by transcript ACA1_047650A; uncharacterized protein	complement(43386..43970)	Acanthamoeba castellanii str. Neff	14917075
ACA1_047660	CDS	ACA1_047660	NW_004457416.1	52321	52710	R	encoded by transcript ACA1_047660A; uncharacterized protein	complement(join(52321..52467,52540..52710))	Acanthamoeba castellanii str. Neff	14917078
ACA1_047670	CDS	ACA1_047670	NW_004457416.1	53933	54183	R	encoded by transcript ACA1_047670A; uncharacterized protein	complement(join(53933..53977,53998..54183))	Acanthamoeba castellanii str. Neff	14917079
ACA1_047790	CDS	ACA1_047790	NW_004457416.1	60160	60549	D	encoded by transcript ACA1_047790A; uncharacterized protein	join(60160..60186,60358..60549)	Acanthamoeba castellanii str. Neff	14917068
ACA1_047800	CDS	ACA1_047800	NW_004457416.1	64007	66308	D	encoded by transcript ACA1_047800A; uncharacterized protein	join(64007..64058,64778..64936,65616..65699,66094..66308)	Acanthamoeba castellanii str. Neff	14917069
ACA1_047810	CDS	ACA1_047810	NW_004457416.1	66660	67097	D	encoded by transcript ACA1_047810A; uncharacterized protein	66660..67097	Acanthamoeba castellanii str. Neff	14917070
ACA1_047820	CDS	ACA1_047820	NW_004457416.1	67455	70316	D	encoded by transcript ACA1_047820A; uncharacterized protein	join(67455..67543,67700..68090,68271..68457,68595..68822,68977..69169,69223..69673,69930..70316)	Acanthamoeba castellanii str. Neff	14917071
ACA1_047930	CDS	ACA1_047930	NW_004457416.1	73246	76242	D	encoded by transcript ACA1_047930A; uncharacterized protein	join(73246..73589,73742..73992,74169..74306,74406..74740,74868..74957,74974..75285,75445..75547,75656..>76242)	Acanthamoeba castellanii str. Neff	14917072
ACA1_201770	CDS	ACA1_201770	NW_004457415.1	142	744	D	encoded by transcript ACA1_201770A; uncharacterized protein	join(<142..421,620..744)	Acanthamoeba castellanii str. Neff	14917064
ACA1_201880	CDS	ACA1_201880	NW_004457415.1	6166	6889	D	encoded by transcript ACA1_201880A; serine/threonine protein kinase	join(6166..6500,6586..6889)	Acanthamoeba castellanii str. Neff	14916987
ACA1_201890	CDS	ACA1_201890	NW_004457415.1	6992	7913	D	encoded by transcript ACA1_201890A; uncharacterized protein	join(6992..7082,7181..7277,7345..7632,7660..7717,7881..7913)	Acanthamoeba castellanii str. Neff	14916988
ACA1_202000	CDS	ACA1_202000	NW_004457415.1	10878	16995	D	encoded by transcript ACA1_202000A; tetratricopeptide repeat domain containing protein	join(10878..11218,11338..11425,11873..11932,12024..12067,12158..12237,12329..12414,12505..12600,12693..12829,12896..13028,13091..13219,13325..13448,13531..13625,13710..13813,13881..14049,14170..14243,14353..14471,14546..14615,14684..14760,14841..14914,15041..15144,15231..15389,15476..15629,15728..15922,16072..16153,16245..16327,16410..16498,16608..16675,16799..16890,16945..16995)	Acanthamoeba castellanii str. Neff	14916989
ACA1_202110	CDS	ACA1_202110	NW_004457415.1	17100	19019	D	encoded by transcript ACA1_202110A; uncharacterized protein	join(17100..17133,17312..17394,17459..17617,17687..17738,18242..18321,18454..18519,18612..18762,18850..19019)	Acanthamoeba castellanii str. Neff	14916990
ACA1_202120	CDS	ACA1_202120	NW_004457415.1	19117	20900	D	encoded by transcript ACA1_202120A; Tubulin/FtsZ family, GTPase domain containing protein	join(19117..19462,19596..19748,19854..19959,20047..20204,20288..20413,20544..20611,20694..20759,20857..>20900)	Acanthamoeba castellanii str. Neff	14916991
ACA1_202230	CDS	ACA1_202230	NW_004457415.1	21805	22871	R	encoded by transcript ACA1_202230A; uncharacterized protein	complement(join(21805..21877,21894..22082,22238..22347,22440..22554,22656..22834,22845..22871))	Acanthamoeba castellanii str. Neff	14916992
ACA1_202240	CDS	ACA1_202240	NW_004457415.1	23088	23394	R	encoded by transcript ACA1_202240A; uncharacterized protein	complement(join(23088..23171,23290..23394))	Acanthamoeba castellanii str. Neff	14917028
ACA1_202250	CDS	ACA1_202250	NW_004457415.1	25086	27548	D	encoded by transcript ACA1_202250A; cytochrome p450 superfamily protein	join(25086..25123,25334..25442,25495..25599,25674..25784,26075..26185,26258..26314,26378..26456,26533..26606,26679..26830,26896..26977,27034..27172,27258..27339,27446..27548)	Acanthamoeba castellanii str. Neff	14916956
ACA1_202360	CDS	ACA1_202360	NW_004457415.1	27708	29413	D	encoded by transcript ACA1_202360A; uncharacterized protein	join(27708..27746,27872..28495,28601..29413)	Acanthamoeba castellanii str. Neff	14916957
ACA1_202370	CDS	ACA1_202370	NW_004457415.1	29509	32706	R	encoded by transcript ACA1_202370A; protein kinase domain containing protein	complement(join(29509..29590,29789..30842,30934..31033,31104..31243,31315..31418,31513..31592,31663..32132,32227..32277,32355..32487,32572..32706))	Acanthamoeba castellanii str. Neff	14916958
ACA1_202380	CDS	ACA1_202380	NW_004457415.1	33099	33593	R	encoded by transcript ACA1_202380A; CS domain containing protein	complement(join(33099..33155,33176..33200,33211..33593))	Acanthamoeba castellanii str. Neff	14916959
ACA1_202390	CDS	ACA1_202390	NW_004457415.1	34203	36785	D	encoded by transcript ACA1_202390A; von Willebrand factor type A domain containing protein	join(34203..34956,35053..35112,35222..35436,35510..35736,35813..35918,35994..36150,36232..36785)	Acanthamoeba castellanii str. Neff	14916960
ACA1_202400	CDS	ACA1_202400	NW_004457415.1	37026	38995	D	encoded by transcript ACA1_202400A; K+ channel protein	join(37026..37242,37302..37409,37520..37618,37711..37803,37927..38152,38191..38346,38424..38577,38668..38713,38790..38995)	Acanthamoeba castellanii str. Neff	14916961
ACA1_202410	CDS	ACA1_202410	NW_004457415.1	39280	40104	D	encoded by transcript ACA1_202410A; uncharacterized protein	join(39280..39354,39490..39583,39722..40104)	Acanthamoeba castellanii str. Neff	14916962
ACA1_202420	CDS	ACA1_202420	NW_004457415.1	41008	42627	D	encoded by transcript ACA1_202420A; uncharacterized protein	join(41008..41203,41407..41583,41700..41849,41969..42627)	Acanthamoeba castellanii str. Neff	14916963
ACA1_202430	CDS	ACA1_202430	NW_004457415.1	43304	44025	R	encoded by transcript ACA1_202430A; clathrin adaptor complex small chain subfamily protein	complement(join(43304..43540,43611..43697,43822..44025))	Acanthamoeba castellanii str. Neff	14916964
ACA1_202440	CDS	ACA1_202440	NW_004457415.1	44091	46726	D	encoded by transcript ACA1_202440A; ImpB/MucB/SamB family protein	join(44091..44180,44257..44396,44524..44677,44742..44853,44958..45110,45220..45369,45487..45675,45748..45913,46027..46230,46312..46726)	Acanthamoeba castellanii str. Neff	14916965
ACA1_202450	CDS	ACA1_202450	NW_004457415.1	46789	51825	R	encoded by transcript ACA1_202450A; MORN repeat-containing protein	complement(join(46789..47651,47737..47858,47972..48113,48200..48279,48338..48429,48530..48640,48719..48794,48893..48998,49036..49169,49257..49319,49403..49507,49595..49730,49832..50006,50111..50220,50330..50454,50566..50628,50716..50808,50841..50851,50894..50995,51089..51182,51253..51378,51497..51825))	Acanthamoeba castellanii str. Neff	14916966
ACA1_202460	CDS	ACA1_202460	NW_004457415.1	52867	54173	D	encoded by transcript ACA1_202460A; SRFtype transcription factor (DNA-binding and dimerization domain) domain containing protein	join(52867..53442,53529..53775,53846..54013,54112..54173)	Acanthamoeba castellanii str. Neff	14916967
ACA1_202470	CDS	ACA1_202470	NW_004457415.1	54717	57501	D	encoded by transcript ACA1_202470A; GRAM domain containing protein	join(54717..54825,54907..55022,55104..55184,55285..57285,57388..57501)	Acanthamoeba castellanii str. Neff	14917012
ACA1_202490	CDS	ACA1_202490	NW_004457415.1	62126	64198	D	encoded by transcript ACA1_202490A; TROVE domain containing protein	62126..64198	Acanthamoeba castellanii str. Neff	14917014
ACA1_202500	CDS	ACA1_202500	NW_004457415.1	66130	66441	D	encoded by transcript ACA1_202500A; uncharacterized protein	66130..66441	Acanthamoeba castellanii str. Neff	14917015
ACA1_202510	CDS	ACA1_202510	NW_004457415.1	67076	67830	R	encoded by transcript ACA1_202510A; ribonuclease HII, putative	complement(join(67076..67204,67234..67830))	Acanthamoeba castellanii str. Neff	14917016
ACA1_202520	CDS	ACA1_202520	NW_004457415.1	68199	68319	D	encoded by transcript ACA1_202520A; uncharacterized protein	join(68199..68301,68312..68319)	Acanthamoeba castellanii str. Neff	14917017
ACA1_202530	CDS	ACA1_202530	NW_004457415.1	68540	69611	D	encoded by transcript ACA1_202530A; NmrA family protein	join(68540..68727,69028..69321,69389..69611)	Acanthamoeba castellanii str. Neff	14917018
ACA1_202640	CDS	ACA1_202640	NW_004457415.1	69987	70392	R	encoded by transcript ACA1_202640A; uncharacterized protein	complement(join(69987..70146,70166..70392))	Acanthamoeba castellanii str. Neff	14917019
ACA1_202650	CDS	ACA1_202650	NW_004457415.1	70485	71067	R	encoded by transcript ACA1_202650A; uncharacterized protein	complement(join(70485..70829,70840..71067))	Acanthamoeba castellanii str. Neff	14917020
ACA1_202660	CDS	ACA1_202660	NW_004457415.1	72116	72433	R	encoded by transcript ACA1_202660A; uncharacterized protein	complement(join(72116..72180,72271..72433))	Acanthamoeba castellanii str. Neff	14917021
ACA1_202670	CDS	ACA1_202670	NW_004457415.1	73523	73852	D	encoded by transcript ACA1_202670A; uncharacterized protein	73523..73852	Acanthamoeba castellanii str. Neff	14917022
ACA1_202680	CDS	ACA1_202680	NW_004457415.1	74099	78412	R	encoded by transcript ACA1_202680A; DENN (AEX3) domain containing protein	complement(join(74099..74354,74444..74546,74608..75467,75570..75710,75797..75919,76128..76510,76616..76765,76888..76978,77127..77235,77329..77410,77522..77628,77800..78412))	Acanthamoeba castellanii str. Neff	14917023
ACA1_202690	CDS	ACA1_202690	NW_004457415.1	79149	83039	D	encoded by transcript ACA1_202690A; PH domain containing protein	join(79149..79226,79295..79378,79463..79518,79601..79752,79821..80007,80078..80237,80321..80411,80489..81379,81501..81742,81836..82809,82835..83039)	Acanthamoeba castellanii str. Neff	14917024
ACA1_202700	CDS	ACA1_202700	NW_004457415.1	83234	85067	R	encoded by transcript ACA1_202700A; branchedchain amino acid aminotransferase	complement(join(83234..83341,83463..83597,83669..83936,84040..84201,84350..84416,84516..84620,84796..84884,84997..85067))	Acanthamoeba castellanii str. Neff	14917025
ACA1_202710	CDS	ACA1_202710	NW_004457415.1	86485	91307	D	encoded by transcript ACA1_202710A; RFX DNAbinding domain containing protein	join(86485..86591,86712..87225,87247..87532,87616..87683,88287..88357,88434..88505,88581..88712,88818..88920,89017..89160,89451..89636,89883..90182,90286..90501,90621..90728,90813..90912,91024..91177,91262..91307)	Acanthamoeba castellanii str. Neff	14917026
ACA1_202720	CDS	ACA1_202720	NW_004457415.1	91565	92468	D	encoded by transcript ACA1_202720A; uncharacterized protein	join(91565..91842,91917..92035,92106..92288,92407..92468)	Acanthamoeba castellanii str. Neff	14917027
ACA1_202730	CDS	ACA1_202730	NW_004457415.1	92577	99518	R	encoded by transcript ACA1_202730A; serine/threonine protein kinase, putative	complement(join(92577..92845,92951..93256,93347..94116,94212..94587,94692..94981,95055..95380,95468..95512,95594..95710,95807..96314,96405..96988,97088..97168,97241..97353,97422..97666,97758..97896,98029..98185,98271..98567,98889..99193,99458..99518))	Acanthamoeba castellanii str. Neff	14917029
ACA1_202740	CDS	ACA1_202740	NW_004457415.1	99888	101776	R	encoded by transcript ACA1_202740A; Myblike DNA-binding domain containing protein	complement(join(99888..100480,100555..100639,100711..100793,100867..101013,101082..101163,101225..101776))	Acanthamoeba castellanii str. Neff	14917030
ACA1_202750	CDS	ACA1_202750	NW_004457415.1	102481	103092	D	encoded by transcript ACA1_202750A; uncharacterized protein	join(102481..102577,102696..102772,102837..102948,103031..103092)	Acanthamoeba castellanii str. Neff	14917031
ACA1_202760	CDS	ACA1_202760	NW_004457415.1	103501	105673	D	encoded by transcript ACA1_202760A; uncharacterized protein	join(103501..103607,103776..103891,104079..104810,104937..105673)	Acanthamoeba castellanii str. Neff	14917032
ACA1_202770	CDS	ACA1_202770	NW_004457415.1	105877	106520	R	encoded by transcript ACA1_202770A; tetratricopeptide repeat domain containing protein	complement(join(105877..106110,106196..106342,106434..106520))	Acanthamoeba castellanii str. Neff	14917033
ACA1_202880	CDS	ACA1_202880	NW_004457415.1	107850	108721	R	encoded by transcript ACA1_202880A; SAP domain containing protein	complement(join(<107850..108134,108231..108370,108427..>108721))	Acanthamoeba castellanii str. Neff	14917034
ACA1_203000	CDS	ACA1_203000	NW_004457415.1	113091	115958	D	encoded by transcript ACA1_203000A; uncharacterized protein	join(113091..113391,113440..113611,113727..113855,113942..114012,114110..114207,114286..114393,114500..114777,114927..115272,115369..115511,115577..115703,115800..115958)	Acanthamoeba castellanii str. Neff	14917036
ACA1_203010	CDS	ACA1_203010	NW_004457415.1	116131	119275	D	encoded by transcript ACA1_203010A; RhoGEF domain containing protein	join(116131..116804,116911..117069,117185..117347,117425..117512,117643..117821,117867..117986,118076..118180,118277..118327,118426..118629,118755..118974,119109..119275)	Acanthamoeba castellanii str. Neff	14917037
ACA1_203020	CDS	ACA1_203020	NW_004457415.1	122120	124289	R	encoded by transcript ACA1_203020A; protein pns1, putative	complement(join(122120..122284,122368..122486,122583..122990,123066..123203,123280..123429,123515..123698,123793..123957,124038..124289))	Acanthamoeba castellanii str. Neff	14917038
ACA1_203030	CDS	ACA1_203030	NW_004457415.1	124573	126438	R	encoded by transcript ACA1_203030A; Nacyl-phosphatidylethanolamine-hydrolyzing phospholipase D, putative	complement(join(124573..124685,124771..124840,124926..124987,125066..125190,125255..125560,125650..125800,126008..126083,126126..126238,126306..126438))	Acanthamoeba castellanii str. Neff	14917039
ACA1_203040	CDS	ACA1_203040	NW_004457415.1	126815	128552	R	encoded by transcript ACA1_203040A; uncharacterized protein	complement(join(126815..127112,127191..127605,127679..128552))	Acanthamoeba castellanii str. Neff	14917040
ACA1_203050	CDS	ACA1_203050	NW_004457415.1	129078	130837	R	encoded by transcript ACA1_203050A; WD domain, Gbeta repeat, domain containing protein	complement(join(129078..129105,129179..129254,129326..129477,129727..129789,129857..129959,130063..130195,130289..130378,130459..130541,130617..130679,130777..130837))	Acanthamoeba castellanii str. Neff	14917041
ACA1_203060	CDS	ACA1_203060	NW_004457415.1	131188	134281	D	encoded by transcript ACA1_203060A; uncharacterized protein	join(131188..131525,131581..131766,131886..132031,132098..132204,132276..132825,132916..133101,133182..133288,133376..133481,133570..134008,134131..134281)	Acanthamoeba castellanii str. Neff	14917042
ACA1_203070	CDS	ACA1_203070	NW_004457415.1	134375	136403	D	encoded by transcript ACA1_203070A; Fbox domain containing protein	join(134375..134467,134606..134949,135030..135151,135261..135341,135437..135536,135630..135753,135868..135996,136103..136181,136267..136403)	Acanthamoeba castellanii str. Neff	14917043
ACA1_203080	CDS	ACA1_203080	NW_004457415.1	137222	140509	R	encoded by transcript ACA1_203080A; uncharacterized protein	complement(join(137222..137773,137814..138134,138208..138372,138481..139018,139033..139150,139248..139477,139578..139913,139981..140155,140254..140509))	Acanthamoeba castellanii str. Neff	14917044
ACA1_203090	CDS	ACA1_203090	NW_004457415.1	141073	144629	D	encoded by transcript ACA1_203090A; glycosyl hydrolase, family 31 protein	join(141073..141196,141275..141372,141505..141553,141662..141726,141814..141900,141978..142044,142125..142185,142320..142336,142418..142499,142587..142652,142722..142876,143004..143061,143173..143302,143391..143484,143645..143793,143944..144007,144109..144398,144492..144629)	Acanthamoeba castellanii str. Neff	14917045
ACA1_203100	CDS	ACA1_203100	NW_004457415.1	144808	145417	R	encoded by transcript ACA1_203100A; Helixloop-helix DNA-binding domain containing protein	complement(join(144808..145039,145104..145417))	Acanthamoeba castellanii str. Neff	14917046
ACA1_203110	CDS	ACA1_203110	NW_004457415.1	146247	146908	D	encoded by transcript ACA1_203110A; uncharacterized protein	join(146247..146398,146527..146908)	Acanthamoeba castellanii str. Neff	14917047
ACA1_203120	CDS	ACA1_203120	NW_004457415.1	147089	148993	D	encoded by transcript ACA1_203120A; RasGEF domain containing protein	join(147089..147187,147309..147460,147539..147643,147744..147912,148022..148109,148227..148840,148907..148993)	Acanthamoeba castellanii str. Neff	14917048
ACA1_203130	CDS	ACA1_203130	NW_004457415.1	149167	151153	D	encoded by transcript ACA1_203130A; NAD dependent epimerase/dehydratase superfamily protein	join(149167..149301,149389..149440,149531..149625,149774..150011,150092..150273,150365..150436,150539..150610,150679..150827,150949..151153)	Acanthamoeba castellanii str. Neff	14917049
ACA1_203140	CDS	ACA1_203140	NW_004457415.1	151247	154001	D	encoded by transcript ACA1_203140A; glycosyltransferase AER61, putative	join(151247..151606,151834..151941,152079..152163,152259..152440,152543..152629,152757..152879,152977..153028,153138..153246,153338..153608,153715..153817,153907..154001)	Acanthamoeba castellanii str. Neff	14917050
ACA1_203150	CDS	ACA1_203150	NW_004457415.1	154117	154617	R	encoded by transcript ACA1_203150A; transcription initiation factor iia, gamma subunit, helical domain containing protein	complement(join(154117..154335,154465..154617))	Acanthamoeba castellanii str. Neff	14917051
ACA1_203160	CDS	ACA1_203160	NW_004457415.1	154996	158644	D	encoded by transcript ACA1_203160A; uncharacterized protein	join(154996..155106,155242..155314,155439..155519,155606..155667,155760..155822,155918..156058,156154..156385,156494..156642,156774..157034,157151..157897,158020..158184,158449..158586,158636..158644)	Acanthamoeba castellanii str. Neff	14917052
ACA1_203270	CDS	ACA1_203270	NW_004457415.1	158890	160600	D	encoded by transcript ACA1_203270A; inositol polyphosphate phosphataselike 1, putative	join(158890..159198,159292..159457,159604..159830,159927..160032,160125..160600)	Acanthamoeba castellanii str. Neff	14917053
ACA1_203280	CDS	ACA1_203280	NW_004457415.1	160860	162946	D	encoded by transcript ACA1_203280A; HemolysinIII related subfamily protein	join(160860..161016,161179..161249,161369..161463,161645..161721,161853..161932,162161..162215,162331..162401,162507..162578,162656..162712,162809..162946)	Acanthamoeba castellanii str. Neff	14917054
ACA1_203490	CDS	ACA1_203490	NW_004457415.1	164716	166103	R	encoded by transcript ACA1_203490A; RhoGAP domain containing protein	complement(join(164716..164985,165157..165271,165387..165562,165681..166103))	Acanthamoeba castellanii str. Neff	14917055
ACA1_203500	CDS	ACA1_203500	NW_004457415.1	166582	168806	R	encoded by transcript ACA1_203500A; coatomer subunit delta1, putative	complement(join(166582..166671,166782..167042,167117..167519,167566..167767,167840..168020,168169..168348,168418..168662,168764..168806))	Acanthamoeba castellanii str. Neff	14917056
ACA1_203510	CDS	ACA1_203510	NW_004457415.1	169012	171197	D	encoded by transcript ACA1_203510A; ubiquitin carboxylterminal hydrolase 22, putative	join(169012..169209,169306..169471,169607..169732,169812..169919,169997..170514,170706..171197)	Acanthamoeba castellanii str. Neff	14917057
ACA1_203620	CDS	ACA1_203620	NW_004457415.1	171357	172713	D	encoded by transcript ACA1_203620A; uncharacterized protein	join(171357..171496,171568..171721,171826..171891,172006..172093,172182..172356,172611..172713)	Acanthamoeba castellanii str. Neff	14917058
ACA1_203630	CDS	ACA1_203630	NW_004457415.1	173095	178039	D	encoded by transcript ACA1_203630A; uncharacterized protein	join(173095..173289,173352..173501,173648..173827,173932..174403,174496..174924,175089..175511,175692..176044,176154..176252,176373..176536,176663..177062,177166..177299,177392..177613,177685..177890,177981..178039)	Acanthamoeba castellanii str. Neff	14917059
ACA1_203640	CDS	ACA1_203640	NW_004457415.1	178230	178556	R	encoded by transcript ACA1_203640A; uncharacterized protein	complement(178230..178556)	Acanthamoeba castellanii str. Neff	14917060
ACA1_203650	CDS	ACA1_203650	NW_004457415.1	179094	181025	R	encoded by transcript ACA1_203650A; dynamin domain containing protein	complement(join(179094..179219,179325..179795,179832..180423,180559..181025))	Acanthamoeba castellanii str. Neff	14917061
ACA1_203660	CDS	ACA1_203660	NW_004457415.1	182029	184797	R	encoded by transcript ACA1_203660A; uncharacterized protein	complement(join(182029..182230,182351..182550,182666..182787,182865..182997,183119..183262,183340..183482,183745..183904,184003..184122,184207..184320,184429..184567,184667..>184797))	Acanthamoeba castellanii str. Neff	14917062
ACA1_203670	CDS	ACA1_203670	NW_004457415.1	185736	186233	D	encoded by transcript ACA1_203670A; DnaJ domain containing protein	185736..186233	Acanthamoeba castellanii str. Neff	14917063
ACA1_203680	CDS	ACA1_203680	NW_004457415.1	186499	187034	D	encoded by transcript ACA1_203680A; Cofilin/tropomyosin-type actin-binding protein	join(186499..186932,186950..187034)	Acanthamoeba castellanii str. Neff	14916993
ACA1_203690	CDS	ACA1_203690	NW_004457415.1	187125	187810	R	encoded by transcript ACA1_203690A; RNA methyltransferase, TrmH superfamily protein	complement(join(187125..187222,187302..187646,187714..187810))	Acanthamoeba castellanii str. Neff	14916994
ACA1_203700	CDS	ACA1_203700	NW_004457415.1	188341	189294	R	encoded by transcript ACA1_203700A; bZIP transcription factor domain containing protein	complement(join(188341..188359,188393..188959,189098..189294))	Acanthamoeba castellanii str. Neff	14916995
ACA1_203710	CDS	ACA1_203710	NW_004457415.1	190571	191379	R	encoded by transcript ACA1_203710A; uncharacterized protein	complement(join(190571..190912,191017..191117,191235..191379))	Acanthamoeba castellanii str. Neff	14916996
ACA1_203720	CDS	ACA1_203720	NW_004457415.1	191720	195760	R	encoded by transcript ACA1_203720A; E1E2 ATPase subfamily protein	complement(join(191720..191845,191931..192005,192085..192145,192244..192467,192559..192672,192767..192867,192989..193133,193236..193334,193435..193775,193861..193998,194079..194178,194247..194370,194472..194695,194756..195438,195685..195760))	Acanthamoeba castellanii str. Neff	14916997
ACA1_203740	CDS	ACA1_203740	NW_004457415.1	201513	203630	D	encoded by transcript ACA1_203740A; 5methylthioribose kinase	join(201513..201716,201806..201995,202126..202299,202434..202513,202608..202758,202962..203167,203248..203366,203486..203630)	Acanthamoeba castellanii str. Neff	14916999
ACA1_203750	CDS	ACA1_203750	NW_004457415.1	203939	206892	R	encoded by transcript ACA1_203750A; PH domain containing protein	complement(join(203939..204149,204237..204406,204503..204617,204698..204756,204853..204951,205154..205180,205284..205365,205505..205601,205757..205836,205918..206009,206166..206274,206421..206515,206667..206848,206865..206892))	Acanthamoeba castellanii str. Neff	14917000
ACA1_203760	CDS	ACA1_203760	NW_004457415.1	207623	208244	D	encoded by transcript ACA1_203760A; 60S ribosomal protein L23, putative	join(207623..207635,207764..207976,208048..208244)	Acanthamoeba castellanii str. Neff	14917001
ACA1_203770	CDS	ACA1_203770	NW_004457415.1	210115	210704	D	encoded by transcript ACA1_203770A; SET domain protein	join(210115..210477,210549..210704)	Acanthamoeba castellanii str. Neff	14917002
ACA1_203780	CDS	ACA1_203780	NW_004457415.1	211164	212833	D	encoded by transcript ACA1_203780A; uncharacterized protein	join(211164..211284,211352..211470,211588..211687,211806..211947,212052..212209,212288..212467,212556..212677,212756..212833)	Acanthamoeba castellanii str. Neff	14917003
ACA1_203890	CDS	ACA1_203890	NW_004457415.1	213890	214857	D	encoded by transcript ACA1_203890A; uncharacterized protein	join(213890..214308,214395..214529,214605..214657,214754..214857)	Acanthamoeba castellanii str. Neff	14917004
ACA1_203900	CDS	ACA1_203900	NW_004457415.1	215202	218384	R	encoded by transcript ACA1_203900A; phosphatidylethanolamine Nmethyltransferase	complement(join(215202..215285,215422..215517,215607..215673,215759..215846,215935..216245,216381..216518,216594..216677,216796..216911,217033..217156,217236..217323,217416..217491,217566..217721,217877..218065,218159..218286,218360..218384))	Acanthamoeba castellanii str. Neff	14917005
ACA1_203910	CDS	ACA1_203910	NW_004457415.1	219282	221467	D	encoded by transcript ACA1_203910A; HEC/Ndc80p family protein	join(219282..219557,219615..219756,219823..219945,220047..220141,220222..220366,220455..220629,220705..221120,221199..221467)	Acanthamoeba castellanii str. Neff	14917006
ACA1_203920	CDS	ACA1_203920	NW_004457415.1	221646	225144	R	encoded by transcript ACA1_203920A; Rap/ran-GAP protein	complement(join(221646..221752,221846..221958,222043..222103,222190..222292,222369..222509,222522..222571,222655..222730,222805..222869,222944..223052,223122..223237,223369..223432,223503..224840,224944..225144))	Acanthamoeba castellanii str. Neff	14917007
ACA1_203930	CDS	ACA1_203930	NW_004457415.1	225730	226731	D	encoded by transcript ACA1_203930A; TAF11, putative	join(225730..225847,225916..226075,226194..226281,226356..226452,226592..226731)	Acanthamoeba castellanii str. Neff	14917008
ACA1_203940	CDS	ACA1_203940	NW_004457415.1	226889	227805	D	encoded by transcript ACA1_203940A; uncharacterized protein	join(226889..226947,227268..227387,227553..227645,227727..227805)	Acanthamoeba castellanii str. Neff	14917009
ACA1_203950	CDS	ACA1_203950	NW_004457415.1	228191	230437	D	encoded by transcript ACA1_203950A; PAS domain Sbox domain containing protein	join(228191..229067,229251..229478,229552..229708,229788..230223,230309..230437)	Acanthamoeba castellanii str. Neff	14917010
ACA1_203960	CDS	ACA1_203960	NW_004457415.1	234954	236792	R	encoded by transcript ACA1_203960A; zincbinding dehydrogenase family oxidoreductase	complement(join(234954..235257,235342..235453,235549..235644,235717..235855,235964..236088,236252..236446,236570..236729,236775..236792))	Acanthamoeba castellanii str. Neff	14917011
ACA1_203970	CDS	ACA1_203970	NW_004457415.1	237147	242356	R	encoded by transcript ACA1_203970A; HECTdomain (ubiquitin-transferase) domain containing protein	complement(join(237147..237249,237311..237461,237538..237675,237813..238090,238174..238294,238382..238505,238598..238737,238803..238916,238977..239090,239160..239770,239885..240014,240097..240336,240475..240781,241159..241232,241315..241371,241555..241704,241779..241877,241967..242089,242185..242356))	Acanthamoeba castellanii str. Neff	14916968
ACA1_203980	CDS	ACA1_203980	NW_004457415.1	242676	243503	D	encoded by transcript ACA1_203980A; uncharacterized protein	join(242676..242816,242882..243060,243159..243272,243362..243503)	Acanthamoeba castellanii str. Neff	14916969
ACA1_203990	CDS	ACA1_203990	NW_004457415.1	243672	244697	R	encoded by transcript ACA1_203990A; uncharacterized protein	complement(join(243672..243791,243883..243947,244111..244146,244225..244284,244356..244388,244495..244572,244664..244697))	Acanthamoeba castellanii str. Neff	14916970
ACA1_204000	CDS	ACA1_204000	NW_004457415.1	244941	245721	R	encoded by transcript ACA1_204000A; uncharacterized protein	complement(join(244941..245093,245191..245238,245314..245403,245500..245721))	Acanthamoeba castellanii str. Neff	14916971
ACA1_204010	CDS	ACA1_204010	NW_004457415.1	246165	246904	R	encoded by transcript ACA1_204010A; RAC GTPase	complement(join(246165..246422,246503..246624,246707..246778,246853..246904))	Acanthamoeba castellanii str. Neff	14916972
ACA1_204020	CDS	ACA1_204020	NW_004457415.1	247829	248344	D	encoded by transcript ACA1_204020A; uncharacterized protein	join(247829..248082,248194..248344)	Acanthamoeba castellanii str. Neff	14916973
ACA1_204030	CDS	ACA1_204030	NW_004457415.1	248876	250984	D	encoded by transcript ACA1_204030A; uncharacterized protein	join(248876..248935,249000..249104,249184..249266,249383..249523,249629..249776,249938..250059,250159..250235,250312..250415,250538..250602,250694..250778,250868..250984)	Acanthamoeba castellanii str. Neff	14916974
ACA1_204040	CDS	ACA1_204040	NW_004457415.1	251196	253129	D	encoded by transcript ACA1_204040A; mutanase	join(251196..251315,251417..251815,251961..252100,252135..252231,252294..252397,252473..252607,252712..252940,253040..253129)	Acanthamoeba castellanii str. Neff	14916975
ACA1_204050	CDS	ACA1_204050	NW_004457415.1	253412	255510	R	encoded by transcript ACA1_204050A; Gpatch domain containing protein	complement(join(253412..253466,253537..253685,253847..253989,254087..254243,254348..254765,255032..255086,255177..255210,255358..255510))	Acanthamoeba castellanii str. Neff	14916976
ACA1_204060	CDS	ACA1_204060	NW_004457415.1	255796	257057	D	encoded by transcript ACA1_204060A; uncharacterized protein	join(255796..256172,256287..256470,256575..257057)	Acanthamoeba castellanii str. Neff	14916977
ACA1_204070	CDS	ACA1_204070	NW_004457415.1	257482	259276	R	encoded by transcript ACA1_204070A; secretion protein MttC, putative	complement(join(257482..257582,257730..257903,258009..258105,258195..258287,258412..258495,258623..258759,258869..259038,259167..259276))	Acanthamoeba castellanii str. Neff	14916978
ACA1_204080	CDS	ACA1_204080	NW_004457415.1	259651	260596	D	encoded by transcript ACA1_204080A; Rho family GTPase	join(259651..259690,259780..259860,259937..260008,260125..260246,260336..260596)	Acanthamoeba castellanii str. Neff	14916979
ACA1_204110	CDS	ACA1_204110	NW_004457415.1	265245	266672	R	encoded by transcript ACA1_204110A; NHL repeat domain containing protein	complement(265245..266672)	Acanthamoeba castellanii str. Neff	14916982
ACA1_204120	CDS	ACA1_204120	NW_004457415.1	266867	275231	R	encoded by transcript ACA1_204120A; RNA polymerase Rpb1 protein	complement(join(266867..267026,267122..267288,267387..267575,267648..267776,267894..268313,269079..269150,269227..269326,269422..269576,269676..269914,269994..270324,270422..270544,270604..270792,270884..271206,271306..271687,271798..271971,272052..272108,272204..272294,272368..272455,272585..272935,273018..273133,273232..273334,273405..273542,273635..273758,273870..274029,274130..274264,274467..274509,274613..274735,274814..275231))	Acanthamoeba castellanii str. Neff	14916983
ACA1_204430	CDS	ACA1_204430	NW_004457415.1	275640	276207	R	encoded by transcript ACA1_204430A; uncharacterized protein	complement(join(275640..275860,275927..276022,276062..276094,276195..276207))	Acanthamoeba castellanii str. Neff	14916984
ACA1_204440	CDS	ACA1_204440	NW_004457415.1	277426	281629	D	encoded by transcript ACA1_204440A; uncharacterized protein	join(277426..278043,278173..278386,278470..278736,278826..278989,279071..279196,279311..279395,279493..279637,279695..279944,280012..280141,280219..280436,280516..280608,280683..280803,280889..280993,281081..281347,281472..281629)	Acanthamoeba castellanii str. Neff	14916985
ACA1_204450	CDS	ACA1_204450	NW_004457415.1	281877	283328	D	encoded by transcript ACA1_204450A; NHL repeat domain containing protein	281877..283328	Acanthamoeba castellanii str. Neff	14916986
ACA1_204460	CDS	ACA1_204460	NW_004457415.1	283420	285463	R	encoded by transcript ACA1_204460A; uncharacterized protein	complement(join(283420..283677,283736..283818,283954..284117,284221..284378,284547..284663,284757..284869,284972..285066,285246..285463))	Acanthamoeba castellanii str. Neff	14916935
ACA1_204470	CDS	ACA1_204470	NW_004457415.1	285666	288578	R	encoded by transcript ACA1_204470A; RasGEF domain containing protein	complement(join(285666..285838,285940..286091,286225..286310,286408..286653,286934..287176,287269..287380,287473..287590,287669..287788,287866..287940,288017..288106,288179..288438,288535..288578))	Acanthamoeba castellanii str. Neff	14916936
ACA1_204480	CDS	ACA1_204480	NW_004457415.1	288831	291116	R	encoded by transcript ACA1_204480A; Tubulin/FtsZ family, GTPase domain containing protein	complement(join(288831..288931,289013..289127,289222..289327,289387..289459,289626..289723,289888..289964,290031..290126,290250..290363,290475..290575,290690..290758,290888..291004,291092..291116))	Acanthamoeba castellanii str. Neff	14916937
ACA1_204490	CDS	ACA1_204490	NW_004457415.1	291255	292491	D	encoded by transcript ACA1_204490A; Ham1 family	join(291255..291375,291452..291516,291586..291659,291750..291819,291922..291996,292085..292161,292308..292491)	Acanthamoeba castellanii str. Neff	14916938
ACA1_204500	CDS	ACA1_204500	NW_004457415.1	292731	299103	D	encoded by transcript ACA1_204500A; uncharacterized protein	join(292731..293189,293276..293440,293536..293652,293768..294011,294138..296456,296542..298431,298517..299103)	Acanthamoeba castellanii str. Neff	14916939
ACA1_204520	CDS	ACA1_204520	NW_004457415.1	303143	304314	R	encoded by transcript ACA1_204520A; uncharacterized protein	complement(join(303143..303203,303288..303501,303605..303775,303887..304037,304156..304314))	Acanthamoeba castellanii str. Neff	14916941
ACA1_204530	CDS	ACA1_204530	NW_004457415.1	304668	305482	R	encoded by transcript ACA1_204530A; Fbox domain containing protein	complement(join(304668..304822,304946..305340,305424..305482))	Acanthamoeba castellanii str. Neff	14916942
ACA1_204540	CDS	ACA1_204540	NW_004457415.1	306569	307990	D	encoded by transcript ACA1_204540A; uncharacterized protein	join(306569..307172,307247..307645,307740..307990)	Acanthamoeba castellanii str. Neff	14916943
ACA1_204550	CDS	ACA1_204550	NW_004457415.1	308362	312136	D	encoded by transcript ACA1_204550A; Vacuolar sorting protein 9 (VPS9) domain containing protein	join(308362..308741,308888..309032,309107..309211,309327..309493,309723..309822,309925..310011,310262..310377,310492..310564,310628..310753,310884..310961,311065..311163,311226..311379,311464..311682,311763..312136)	Acanthamoeba castellanii str. Neff	14916944
ACA1_204560	CDS	ACA1_204560	NW_004457415.1	312474	312896	R	encoded by transcript ACA1_204560A; Shwachman-Bodian-Diamond syndrome (SBDS) protein	complement(join(312474..312603,312697..312896))	Acanthamoeba castellanii str. Neff	14916945
ACA1_204570	CDS	ACA1_204570	NW_004457415.1	313451	314982	R	encoded by transcript ACA1_204570A; uncharacterized protein	complement(join(313451..313788,313881..314029,314131..314195,314305..314397,314540..314696,314834..314982))	Acanthamoeba castellanii str. Neff	14916946
ACA1_204580	CDS	ACA1_204580	NW_004457415.1	315469	316442	D	encoded by transcript ACA1_204580A; uncharacterized protein	join(315469..315525,315637..315900,315981..316208,316269..316442)	Acanthamoeba castellanii str. Neff	14916947
ACA1_204590	CDS	ACA1_204590	NW_004457415.1	316538	317579	R	encoded by transcript ACA1_204590A; protein c2orf25, mitochondrial, putative	complement(join(316538..316699,316789..316866,316960..317046,317135..317278,317388..317579))	Acanthamoeba castellanii str. Neff	14916948
ACA1_204610	CDS	ACA1_204610	NW_004457415.1	318368	321768	D	encoded by transcript ACA1_204610A; BTB/POZ domain containing protein	join(318368..318648,318771..318898,319006..319286,319413..319547,319667..319742,319838..320071,320210..320289,320416..320541,320613..320741,320811..320877,320970..321187,321309..321358,321408..321768)	Acanthamoeba castellanii str. Neff	14916950
ACA1_204620	CDS	ACA1_204620	NW_004457415.1	322187	324034	D	encoded by transcript ACA1_204620A; uncharacterized protein	join(322187..322549,322760..322970,323049..323173,323246..323309,323364..324034)	Acanthamoeba castellanii str. Neff	14916951
ACA1_204630	CDS	ACA1_204630	NW_004457415.1	324017	324834	R	encoded by transcript ACA1_204630A; uncharacterized protein	complement(join(324017..324189,324277..324386,324496..324594,324701..>324834))	Acanthamoeba castellanii str. Neff	14916952
ACA1_204740	CDS	ACA1_204740	NW_004457415.1	326154	326616	D	encoded by transcript ACA1_204740A; uncharacterized protein	join(326154..326513,326611..326616)	Acanthamoeba castellanii str. Neff	14916953
ACA1_204850	CDS	ACA1_204850	NW_004457415.1	328920	330556	D	encoded by transcript ACA1_204850A; uncharacterized protein	join(328920..329009,329093..329192,329264..329301,329404..329493,329570..329642,329742..329808,329892..329999,330093..330192,330282..330339,330414..330556)	Acanthamoeba castellanii str. Neff	14916954
ACA1_204960	CDS	ACA1_204960	NW_004457415.1	335071	336978	D	encoded by transcript ACA1_204960A; queuine tRNAribosyltransferase	join(335071..335226,335337..335422,335546..335781,335868..335999,336086..336232,336306..336428,336541..336733,336837..336978)	Acanthamoeba castellanii str. Neff	14916955
ACA1_310730	CDS	ACA1_310730	NW_004457414.1	65	380	D	encoded by transcript ACA1_310730A; uncharacterized protein	join(65..163,234..380)	Acanthamoeba castellanii str. Neff	14916934
ACA1_310740	CDS	ACA1_310740	NW_004457414.1	499	4241	R	encoded by transcript ACA1_310740A; carboxylesterase superfamily protein	complement(join(499..603,676..763,927..1005,1075..1209,1272..1633,1697..1890,2008..2065,2244..2700,2788..3520,3708..4241))	Acanthamoeba castellanii str. Neff	14916923
ACA1_310750	CDS	ACA1_310750	NW_004457414.1	5189	7081	D	encoded by transcript ACA1_310750A; uncharacterized protein	join(5189..5265,5744..5895,5972..6473,6542..6657,6736..6854,6920..7081)	Acanthamoeba castellanii str. Neff	14916924
ACA1_310760	CDS	ACA1_310760	NW_004457414.1	7286	7994	D	encoded by transcript ACA1_310760A; uncharacterized protein	join(7286..7379,7450..7543,7609..7721,7801..7994)	Acanthamoeba castellanii str. Neff	14916925
ACA1_310770	CDS	ACA1_310770	NW_004457414.1	8360	11229	D	encoded by transcript ACA1_310770A; TAP Cterminal subfamily protein	join(8360..8501,8572..8672,8729..8815,8929..9027,9133..9351,9465..9563,9662..9777,9875..10045,10123..10282,10353..10536,10620..10912,10984..11100,11185..11229)	Acanthamoeba castellanii str. Neff	14916926
ACA1_310780	CDS	ACA1_310780	NW_004457414.1	11708	14767	D	encoded by transcript ACA1_310780A; uncharacterized protein	join(11708..11907,11984..12191,12270..12350,12420..12542,12639..13428,13522..13931,13990..14227,14316..14767)	Acanthamoeba castellanii str. Neff	14916927
ACA1_310790	CDS	ACA1_310790	NW_004457414.1	14993	15946	D	encoded by transcript ACA1_310790A; uncharacterized protein	join(14993..15144,15227..15281,15350..15464,15610..15682,15805..15946)	Acanthamoeba castellanii str. Neff	14916928
ACA1_310800	CDS	ACA1_310800	NW_004457414.1	16071	18078	R	encoded by transcript ACA1_310800A; integral membrane protein duf6 domain containing protein	complement(join(16071..16326,16415..16530,16606..16694,16760..16843,16963..17127,17239..17627,17704..17810,17911..18078))	Acanthamoeba castellanii str. Neff	14916929
ACA1_310810	CDS	ACA1_310810	NW_004457414.1	18335	20100	D	encoded by transcript ACA1_310810A; cAMPdependent protein kinase type I-alpha regulatory subunit, putative	join(18335..19216,19295..19415,19538..19659,19763..19903,19993..20100)	Acanthamoeba castellanii str. Neff	14916930
ACA1_310820	CDS	ACA1_310820	NW_004457414.1	20365	21073	R	encoded by transcript ACA1_310820A; uncharacterized protein	complement(join(20365..20439,20515..20595,20747..21073))	Acanthamoeba castellanii str. Neff	14916931
ACA1_310830	CDS	ACA1_310830	NW_004457414.1	21299	22867	R	encoded by transcript ACA1_310830A; uncharacterized protein	complement(join(21299..22426,22554..22700,22784..22867))	Acanthamoeba castellanii str. Neff	14916932
ACA1_336640	CDS	ACA1_336640	NW_004457413.1	552	1167	R	encoded by transcript ACA1_336640A; glutathionedisulfide reductase	complement(join(552..665,755..975,1071..1167))	Acanthamoeba castellanii str. Neff	14916922
ACA1_336850	CDS	ACA1_336850	NW_004457413.1	2688	4077	R	encoded by transcript ACA1_336850A; uncharacterized protein	complement(join(2688..2736,2844..3098,3183..3268,3344..3589,3706..4077))	Acanthamoeba castellanii str. Neff	14916920
ACA1_336860	CDS	ACA1_336860	NW_004457413.1	5330	7610	R	encoded by transcript ACA1_336860A; glutathionedisulfide reductase	complement(join(5330..5443,5526..5746,5836..5920,5989..6159,6255..6345,6423..6508,6587..6636,6707..6782,6881..6967,7047..7245,7318..7456,7565..7610))	Acanthamoeba castellanii str. Neff	14916921
ACA1_336870	CDS	ACA1_336870	NW_004457413.1	7679	9857	R	encoded by transcript ACA1_336870A; eukaryotic initiation factor 3 gamma subunit family protein	complement(join(7679..7695,7721..8021,8096..8285,8389..8638,8711..8835,8942..9025,9121..9322,9424..9575,9688..9857))	Acanthamoeba castellanii str. Neff	14916910
ACA1_336880	CDS	ACA1_336880	NW_004457413.1	10243	16040	D	encoded by transcript ACA1_336880A; SH3 domain containing protein	join(<10243..10471,10542..10585,10673..10750,11077..11740,11815..11996,12066..12126,12246..12479,12568..12653,12719..13150,13228..13398,13464..13547,13659..13757,13834..13906,14032..14114,14198..14527,14624..14734,14823..14943,15017..15138,15228..15535,15597..15709,15769..15881,15966..16040)	Acanthamoeba castellanii str. Neff	14916911
ACA1_336890	CDS	ACA1_336890	NW_004457413.1	16584	16868	D	encoded by transcript ACA1_336890A; uncharacterized protein	16584..16868	Acanthamoeba castellanii str. Neff	14916912
ACA1_336900	CDS	ACA1_336900	NW_004457413.1	17759	30901	D	encoded by transcript ACA1_336900A; uncharacterized protein	17759..30901	Acanthamoeba castellanii str. Neff	14916913
ACA1_336910	CDS	ACA1_336910	NW_004457413.1	31032	33754	D	encoded by transcript ACA1_336910A; actin subfamily protein	join(31032..31202,31400..31515,31690..31798,31902..32009,32114..32206,32328..32451,32743..32891,32915..32952,33060..33332,33421..33754)	Acanthamoeba castellanii str. Neff	14916914
ACA1_336920	CDS	ACA1_336920	NW_004457413.1	33884	34991	D	encoded by transcript ACA1_336920A; uncharacterized protein	join(33884..34047,34291..34369,34464..34574,34668..34775,34878..34991)	Acanthamoeba castellanii str. Neff	14916915
ACA1_336930	CDS	ACA1_336930	NW_004457413.1	35075	36248	D	encoded by transcript ACA1_336930A; SWIM-domain containing Srs2 interacting protein 1 family protein	join(35075..35157,35320..35425,35511..35636,35713..35772,35811..35865,35924..35974,36067..36248)	Acanthamoeba castellanii str. Neff	14916916
ACA1_336940	CDS	ACA1_336940	NW_004457413.1	36372	36673	D	encoded by transcript ACA1_336940A; uncharacterized protein	join(36372..36375,36420..36673)	Acanthamoeba castellanii str. Neff	14916917
ACA1_336950	CDS	ACA1_336950	NW_004457413.1	36940	37893	R	encoded by transcript ACA1_336950A; uncharacterized protein	complement(join(36940..37074,37151..37478,37584..37675,37780..37893))	Acanthamoeba castellanii str. Neff	14916918
ACA1_337060	CDS	ACA1_337060	NW_004457413.1	41004	41216	R	encoded by transcript ACA1_337060A; uncharacterized protein	complement(41004..>41216)	Acanthamoeba castellanii str. Neff	14916919
ACA1_347010	CDS	ACA1_347010	NW_004457412.1	58	1514	D	encoded by transcript ACA1_347010A; uncharacterized protein	join(58..1304,1409..1514)	Acanthamoeba castellanii str. Neff	14916905
ACA1_347020	CDS	ACA1_347020	NW_004457412.1	1699	4518	R	encoded by transcript ACA1_347020A; Sec23/Sec24 trunk domain containing protein	complement(join(1699..2012,2095..2263,2365..2459,2477..2647,2719..2837,2923..3029,3121..3371,3442..3656,3742..3857,3940..4094,4169..4256,4333..4518))	Acanthamoeba castellanii str. Neff	14916904
ACA1_347130	CDS	ACA1_347130	NW_004457412.1	5977	6790	D	encoded by transcript ACA1_347130A; uncharacterized protein	join(5977..5980,6001..6041,6152..6790)	Acanthamoeba castellanii str. Neff	14916906
ACA1_347140	CDS	ACA1_347140	NW_004457412.1	9723	10354	D	encoded by transcript ACA1_347140A; uncharacterized protein	join(9723..9768,9963..10354)	Acanthamoeba castellanii str. Neff	14916907
ACA1_347350	CDS	ACA1_347350	NW_004457412.1	13141	14360	R	encoded by transcript ACA1_347350A; O-methyltransferase	complement(join(13141..13158,13253..13317,13373..13433,13524..13653,13733..13858,13936..14042,14118..14287,14312..14360))	Acanthamoeba castellanii str. Neff	14916908
ACA1_347360	CDS	ACA1_347360	NW_004457412.1	14435	15866	R	encoded by transcript ACA1_347360A; uncharacterized protein	complement(join(14435..14596,14724..14831,14859..14931,15025..15172,15246..15368,15446..15526,15600..15702,15780..15866))	Acanthamoeba castellanii str. Neff	14916909
ACA1_010390	CDS	ACA1_010390	NW_004457411.1	694	1162	R	encoded by transcript ACA1_010390A; uncharacterized protein	complement(join(<694..775,845..965,1090..>1162))	Acanthamoeba castellanii str. Neff	14916903
ACA1_010500	CDS	ACA1_010500	NW_004457411.1	1813	3367	R	encoded by transcript ACA1_010500A; uncharacterized protein	complement(join(1813..1886,2046..2148,2477..3095,3147..3367))	Acanthamoeba castellanii str. Neff	14916899
ACA1_010610	CDS	ACA1_010610	NW_004457411.1	5881	8163	R	encoded by transcript ACA1_010610A; Fbox domain and Ankyrin repeat containing protein	complement(join(5881..6197,6308..6490,6598..6723,6800..6898,6968..7121,7196..7387,7456..7598,7657..7736,7816..7928,8011..8163))	Acanthamoeba castellanii str. Neff	14916902
ACA1_010620	CDS	ACA1_010620	NW_004457411.1	8888	9134	R	encoded by transcript ACA1_010620A; uncharacterized protein	complement(join(8888..8899,8931..9134))	Acanthamoeba castellanii str. Neff	14916901
ACA1_010730	CDS	ACA1_010730	NW_004457411.1	12197	12891	R	encoded by transcript ACA1_010730A; uncharacterized protein	complement(join(12197..12553,12742..12891))	Acanthamoeba castellanii str. Neff	14916900
ACA1_176510	CDS	ACA1_176510	NW_004457410.1	23	1142	D	encoded by transcript ACA1_176510A; uncharacterized protein	join(<23..178,269..389,600..887,994..1142)	Acanthamoeba castellanii str. Neff	14916810
ACA1_176520	CDS	ACA1_176520	NW_004457410.1	1184	1429	D	encoded by transcript ACA1_176520A; uncharacterized protein	1184..>1429	Acanthamoeba castellanii str. Neff	14916806
ACA1_176630	CDS	ACA1_176630	NW_004457410.1	7649	8327	D	encoded by transcript ACA1_176630A; TolA protein	join(7649..7747,7921..>8327)	Acanthamoeba castellanii str. Neff	14916807
ACA1_176740	CDS	ACA1_176740	NW_004457410.1	14212	14621	R	encoded by transcript ACA1_176740A; uncharacterized protein	complement(join(14212..14294,14325..14426,14519..14621))	Acanthamoeba castellanii str. Neff	14916808
ACA1_176750	CDS	ACA1_176750	NW_004457410.1	15030	15262	D	encoded by transcript ACA1_176750A; uncharacterized protein	join(15030..15099,15120..15262)	Acanthamoeba castellanii str. Neff	14916809
ACA1_176860	CDS	ACA1_176860	NW_004457410.1	15711	17053	D	encoded by transcript ACA1_176860A; glnglu non-discriminatory tRNA synthetase	join(<15711..15806,15903..16129,16232..16547,16626..16784,16913..>17053)	Acanthamoeba castellanii str. Neff	14916802
ACA1_176970	CDS	ACA1_176970	NW_004457410.1	19832	22896	D	encoded by transcript ACA1_176970A; LETM1like protein	join(19832..19973,20058..20139,20236..20575,20688..20834,20955..21065,21771..21919,22018..22216,22298..22363,22463..22638,22746..22896)	Acanthamoeba castellanii str. Neff	14916803
ACA1_177080	CDS	ACA1_177080	NW_004457410.1	23751	26879	D	encoded by transcript ACA1_177080A; uncharacterized protein	join(23751..23908,23989..24234,24299..24469,24541..24643,24844..24889,24996..25089,25193..25283,25353..25390,25497..25617,25760..25921,26030..26165,26294..26432,26546..26879)	Acanthamoeba castellanii str. Neff	14916804
ACA1_177090	CDS	ACA1_177090	NW_004457410.1	26828	28583	R	encoded by transcript ACA1_177090A; uncharacterized protein	complement(join(26828..26861,27064..28361,28411..28486,28519..28583))	Acanthamoeba castellanii str. Neff	14916805
ACA1_177100	CDS	ACA1_177100	NW_004457410.1	28713	33808	R	encoded by transcript ACA1_177100A; protein kinase domain containing protein	complement(join(28713..30474,30509..31020,31133..33808))	Acanthamoeba castellanii str. Neff	14916811
ACA1_177110	CDS	ACA1_177110	NW_004457410.1	34338	36341	D	encoded by transcript ACA1_177110A; uncharacterized protein	34338..36341	Acanthamoeba castellanii str. Neff	14916812
ACA1_177120	CDS	ACA1_177120	NW_004457410.1	36393	36947	R	encoded by transcript ACA1_177120A; uncharacterized protein	complement(join(36393..36515,36621..36947))	Acanthamoeba castellanii str. Neff	14916813
ACA1_177130	CDS	ACA1_177130	NW_004457410.1	37681	39464	R	encoded by transcript ACA1_177130A; ankyrin 2,3/unc44, putative	complement(join(37681..38132,38358..38464,38541..38660,38736..38847,38944..39032,39126..39210,39290..39464))	Acanthamoeba castellanii str. Neff	14916814
ACA1_177140	CDS	ACA1_177140	NW_004457410.1	40498	41142	R	encoded by transcript ACA1_177140A; uncharacterized protein	complement(40498..41142)	Acanthamoeba castellanii str. Neff	14916815
ACA1_177250	CDS	ACA1_177250	NW_004457410.1	42381	43525	D	encoded by transcript ACA1_177250A; WD domain, G-beta repeat-containing protein	join(<42381..42567,42648..42736,42830..42865,42992..43106,43191..43312,43382..>43525)	Acanthamoeba castellanii str. Neff	14916816
ACA1_177360	CDS	ACA1_177360	NW_004457410.1	44245	49616	R	encoded by transcript ACA1_177360A; Rap/ran GTPase-activating protein	complement(join(44245..44352,44433..44565,44685..44909,45030..45125,45295..45377,45479..45555,45646..45763,45894..45992,46050..46292,46431..46565,46674..46766,46842..46948,47018..47252,47294..47388,47462..47525,47606..47737,47871..48101,48209..48300,48401..48477,48594..48790,48885..49011,49108..49229,49385..49480,49569..49616))	Acanthamoeba castellanii str. Neff	14916817
ACA1_177370	CDS	ACA1_177370	NW_004457410.1	50460	51411	R	encoded by transcript ACA1_177370A; dihydropteridine reductase	complement(join(50460..50681,50836..51065,51201..51411))	Acanthamoeba castellanii str. Neff	14916853
ACA1_177380	CDS	ACA1_177380	NW_004457410.1	51964	54033	D	encoded by transcript ACA1_177380A; glucokinase	join(51964..52059,52259..52348,52494..52637,52733..52814,52949..53061,53251..53443,53537..53633,53701..53776,53866..54033)	Acanthamoeba castellanii str. Neff	14916854
ACA1_177390	CDS	ACA1_177390	NW_004457410.1	55978	57987	D	encoded by transcript ACA1_177390A; kelch repeat protein	join(55978..56563,56630..57987)	Acanthamoeba castellanii str. Neff	14916855
ACA1_177400	CDS	ACA1_177400	NW_004457410.1	58501	59860	R	encoded by transcript ACA1_177400A; uncharacterized protein	complement(join(58501..58836,59429..59638,59723..59860))	Acanthamoeba castellanii str. Neff	14916856
ACA1_177410	CDS	ACA1_177410	NW_004457410.1	60573	61079	D	encoded by transcript ACA1_177410A; uncharacterized protein	join(60573..60940,61025..61079)	Acanthamoeba castellanii str. Neff	14916857
ACA1_177420	CDS	ACA1_177420	NW_004457410.1	61644	63089	R	encoded by transcript ACA1_177420A; FAD binding domain containing protein	complement(61644..63089)	Acanthamoeba castellanii str. Neff	14916858
ACA1_177430	CDS	ACA1_177430	NW_004457410.1	64798	65814	R	encoded by transcript ACA1_177430A; uncharacterized protein	complement(join(64798..64814,64978..65088,65233..65334,65425..65542,65668..65814))	Acanthamoeba castellanii str. Neff	14916859
ACA1_177440	CDS	ACA1_177440	NW_004457410.1	66102	68549	D	encoded by transcript ACA1_177440A; uncharacterized protein	join(66102..66143,66221..66320,66400..66535,66628..66718,66793..66879,66943..67074,67181..67498,67604..67684,67756..68037,68182..68250,68388..68549)	Acanthamoeba castellanii str. Neff	14916860
ACA1_177450	CDS	ACA1_177450	NW_004457410.1	68652	68984	R	encoded by transcript ACA1_177450A; uncharacterized protein	complement(join(68652..68870,68898..68984))	Acanthamoeba castellanii str. Neff	14916861
ACA1_177460	CDS	ACA1_177460	NW_004457410.1	69692	71972	D	encoded by transcript ACA1_177460A; RasGEF domain containing protein	join(69692..70091,70166..70250,70331..70417,70499..70649,70710..70829,71145..71367,71455..71972)	Acanthamoeba castellanii str. Neff	14916862
ACA1_177470	CDS	ACA1_177470	NW_004457410.1	72744	74034	D	encoded by transcript ACA1_177470A; ADP-sugar pyrophosphatase, putative	join(72744..72800,72908..73022,73133..73240,73344..73415,73483..73562,73691..73730,73799..73867,73940..74034)	Acanthamoeba castellanii str. Neff	14916863
ACA1_177480	CDS	ACA1_177480	NW_004457410.1	74627	75109	D	encoded by transcript ACA1_177480A; uncharacterized protein	74627..75109	Acanthamoeba castellanii str. Neff	14916834
ACA1_177490	CDS	ACA1_177490	NW_004457410.1	75471	82617	D	encoded by transcript ACA1_177490A; ubiquitin domain containing protein	join(75471..75484,75695..75742,75853..75976,76098..76167,76274..76392,76516..76590,76680..76820,76906..77020,77111..77201,77303..77483,77589..77669,77817..77900,78020..78186,78288..78373,78520..78654,78807..79784,79953..80044,80148..80225,80327..80368,80449..80599,80681..80739,80847..80960,81062..81148,81267..81536,81652..81789,81902..82132,82214..82390,82534..82617)	Acanthamoeba castellanii str. Neff	14916835
ACA1_177500	CDS	ACA1_177500	NW_004457410.1	82994	86921	D	encoded by transcript ACA1_177500A; uncharacterized protein	join(82994..83279,83361..83428,83503..83560,83636..83728,83796..84154,84274..84357,84479..85762,85871..86179,86275..86695,86800..86921)	Acanthamoeba castellanii str. Neff	14916836
ACA1_177510	CDS	ACA1_177510	NW_004457410.1	88193	88732	D	encoded by transcript ACA1_177510A; uncharacterized protein	88193..88732	Acanthamoeba castellanii str. Neff	14916837
ACA1_177530	CDS	ACA1_177530	NW_004457410.1	93499	96186	D	encoded by transcript ACA1_177530A; uncharacterized protein	join(93499..93949,94064..94186,94313..94476,94556..94639,94715..94786,94880..94978,95056..95214,95329..95439,95537..95637,95732..95835,95959..95995,96063..96186)	Acanthamoeba castellanii str. Neff	14916839
ACA1_177540	CDS	ACA1_177540	NW_004457410.1	96375	96782	R	encoded by transcript ACA1_177540A; uncharacterized protein	complement(96375..96782)	Acanthamoeba castellanii str. Neff	14916840
ACA1_177550	CDS	ACA1_177550	NW_004457410.1	97498	101073	R	encoded by transcript ACA1_177550A; PUL domain containing protein	complement(join(97498..97810,97887..97999,98076..98248,98342..98513,98597..98683,98773..98957,99052..99204,99291..99595,99674..99863,99959..100101,100181..100310,100398..100475,100494..100507,100644..100808,100884..100956,100979..101013,101039..101073))	Acanthamoeba castellanii str. Neff	14916841
ACA1_177560	CDS	ACA1_177560	NW_004457410.1	101520	102790	R	encoded by transcript ACA1_177560A; proteasome subunit beta type7, putative	complement(join(101520..101623,101707..101866,101950..102251,102364..102544,102567..102648,102741..102790))	Acanthamoeba castellanii str. Neff	14916842
ACA1_177570	CDS	ACA1_177570	NW_004457410.1	102999	104421	D	encoded by transcript ACA1_177570A; uncharacterized protein	join(102999..103161,103253..103333,103435..103493,103592..103747,103817..103907,103971..104051,104111..104219,104298..104421)	Acanthamoeba castellanii str. Neff	14916843
ACA1_177580	CDS	ACA1_177580	NW_004457410.1	105147	105619	D	encoded by transcript ACA1_177580A; uncharacterized protein	join(105147..105249,105312..105430,105491..105619)	Acanthamoeba castellanii str. Neff	14916844
ACA1_177590	CDS	ACA1_177590	NW_004457410.1	105746	106879	D	encoded by transcript ACA1_177590A; uncharacterized protein	join(105746..105834,105905..106376,106459..106598,106681..106774,106793..106879)	Acanthamoeba castellanii str. Neff	14916818
ACA1_177700	CDS	ACA1_177700	NW_004457410.1	108461	110127	D	encoded by transcript ACA1_177700A; HRDC domain containing protein	join(108461..108560,108653..108771,108855..108923,109001..109114,109196..109294,109374..109448,109520..109584,109650..109764,109897..110127)	Acanthamoeba castellanii str. Neff	14916819
ACA1_177710	CDS	ACA1_177710	NW_004457410.1	110291	112614	R	encoded by transcript ACA1_177710A; CDPalcohol phosphatidyltransferase superfamily protein	complement(join(110291..110480,110584..110687,110767..110834,110937..111058,111176..111311,111412..111506,111636..111739,111875..111973,112081..112212,112314..112323,112418..112614))	Acanthamoeba castellanii str. Neff	14916820
ACA1_177720	CDS	ACA1_177720	NW_004457410.1	113044	114233	R	encoded by transcript ACA1_177720A; Poly(ADPribose) polymerase and DNA-Ligase Zn-finger region domain containing protein	complement(join(113044..113679,113789..113847,113971..114016,114084..114233))	Acanthamoeba castellanii str. Neff	14916821
ACA1_177730	CDS	ACA1_177730	NW_004457410.1	114452	118226	R	encoded by transcript ACA1_177730A; protein phosphatase 4 regulatory subunit 1, putative	complement(join(114452..114595,114750..114779,114878..114974,115106..115224,115325..115445,115584..115654,115766..115831,115910..116284,116374..116586,116729..116830,116919..117077,117150..117233,117603..117699,117775..117871,118220..118226))	Acanthamoeba castellanii str. Neff	14916822
ACA1_177740	CDS	ACA1_177740	NW_004457410.1	118553	123506	D	encoded by transcript ACA1_177740A; uncharacterized protein	join(118553..118630,118763..118893,119009..119053,119142..119358,119490..119548,119675..119703,119819..119872,120052..120131,120231..120310,120427..120723,120805..120879,121101..121187,121333..121415,121517..121579,121655..121836,121966..122527,122644..123506)	Acanthamoeba castellanii str. Neff	14916823
ACA1_177750	CDS	ACA1_177750	NW_004457410.1	123803	128721	D	encoded by transcript ACA1_177750A; DENN (AEX-3) domain containing protein	join(123803..124108,124409..124560,124782..124942,125074..125189,125342..125506,125599..125842,125942..126020,126120..126219,126348..126419,126542..126827,126945..127162,127231..127593,127801..128721)	Acanthamoeba castellanii str. Neff	14916824
ACA1_177860	CDS	ACA1_177860	NW_004457410.1	128839	131947	R	encoded by transcript ACA1_177860A; formin domain containing protein	complement(join(128839..129018,129160..129567,129656..129739,129874..129942,130049..130129,130247..130449,130628..130719,130856..130957,131082..131223,131340..131429,131527..131586,131669..131792,131912..131947))	Acanthamoeba castellanii str. Neff	14916825
ACA1_177870	CDS	ACA1_177870	NW_004457410.1	132405	134939	R	encoded by transcript ACA1_177870A; Ankyrin repeatcontaining protein	complement(join(132405..132487,132592..132868,133049..133132,133230..133349,133485..133603,133729..133857,133946..134182,134255..134348,134511..134686,134810..134939))	Acanthamoeba castellanii str. Neff	14916826
ACA1_177880	CDS	ACA1_177880	NW_004457410.1	135422	138980	D	encoded by transcript ACA1_177880A; SH3 domain containing protein	join(135422..135478,135595..135802,135926..135965,136089..136182,136307..136453,136578..136631,136719..136838,136951..137407,137506..138980)	Acanthamoeba castellanii str. Neff	14916827
ACA1_177890	CDS	ACA1_177890	NW_004457410.1	139049	142174	R	encoded by transcript ACA1_177890A; Phosphatidylinositol4-phosphate 5-Kinase	complement(join(139049..139202,139393..139571,139661..139792,139913..140008,140126..140183,140288..140430,140447..140454,140680..140908,141043..141775,141882..142174))	Acanthamoeba castellanii str. Neff	14916828
ACA1_177900	CDS	ACA1_177900	NW_004457410.1	142311	143779	D	encoded by transcript ACA1_177900A; synaptobrevin domain containing protein	join(142311..142326,142470..142520,142632..142710,142888..142932,143058..143211,143360..143505,143608..143779)	Acanthamoeba castellanii str. Neff	14916829
ACA1_177910	CDS	ACA1_177910	NW_004457410.1	143900	148983	R	encoded by transcript ACA1_177910A; uncharacterized protein	complement(join(143900..144463,144539..144665,144743..144890,145036..145121,145228..145314,145612..145713,145839..145913,146020..146839,146893..147802,147898..148253,148364..148561,148656..148775,148890..148983))	Acanthamoeba castellanii str. Neff	14916830
ACA1_177920	CDS	ACA1_177920	NW_004457410.1	149111	152148	R	encoded by transcript ACA1_177920A; Rab GTPase domain containing protein	complement(join(149111..149376,149467..149591,149748..149836,149921..150226,150297..150367,150458..150607,150681..150746,150831..150971,151061..151132,151217..151351,151527..151687,151859..152148))	Acanthamoeba castellanii str. Neff	14916831
ACA1_177930	CDS	ACA1_177930	NW_004457410.1	152745	153082	D	encoded by transcript ACA1_177930A; uncharacterized protein	join(152745..152842,152971..153082)	Acanthamoeba castellanii str. Neff	14916832
ACA1_177940	CDS	ACA1_177940	NW_004457410.1	155914	156606	D	encoded by transcript ACA1_177940A; polyprotein	join(155914..156089,156123..156606)	Acanthamoeba castellanii str. Neff	14916833
ACA1_177950	CDS	ACA1_177950	NW_004457410.1	157209	157595	R	encoded by transcript ACA1_177950A; uncharacterized protein	complement(join(157209..157216,157355..157595))	Acanthamoeba castellanii str. Neff	14916883
ACA1_178060	CDS	ACA1_178060	NW_004457410.1	159294	163615	R	encoded by transcript ACA1_178060A; dipeptidylpeptidase 9, putative	complement(join(159294..159444,159533..159586,159696..159789,159894..159942,160033..160161,160259..160344,160395..160580,160668..160784,160867..161006,161081..161160,161458..161627,161693..161798,161861..161956,162038..162241,162331..162467,162556..162623,162783..162886,162966..163032,163155..163216,163295..163615))	Acanthamoeba castellanii str. Neff	14916884
ACA1_178070	CDS	ACA1_178070	NW_004457410.1	163755	173775	D	encoded by transcript ACA1_178070A; Dedicator of cytokinesis	join(163755..163982,164189..164405,164497..164675,164850..164881,165008..165152,165235..165402,165551..165625,165727..166020,166205..166366,166477..166677,166787..166912,167007..167133,167291..167447,167567..167672,167802..167905,168080..168410,168608..168754,168974..169066,169211..169471,169570..169650,169753..169965,170137..170259,170377..170434,170596..170783,170924..171253,171406..171535,171689..171876,171927..172031,172147..172287,172440..172620,172722..172870,173060..173195,173403..173557,173653..173775)	Acanthamoeba castellanii str. Neff	14916885
ACA1_178080	CDS	ACA1_178080	NW_004457410.1	174019	174643	R	encoded by transcript ACA1_178080A; uncharacterized protein	complement(join(174019..174176,174285..174490,174528..174643))	Acanthamoeba castellanii str. Neff	14916886
ACA1_178090	CDS	ACA1_178090	NW_004457410.1	175111	176171	D	encoded by transcript ACA1_178090A; uncharacterized protein	join(175111..175527,175737..175925,176157..176171)	Acanthamoeba castellanii str. Neff	14916887
ACA1_178200	CDS	ACA1_178200	NW_004457410.1	176994	179491	D	encoded by transcript ACA1_178200A; SPRY domain containing protein	join(176994..177034,177570..177680,178012..178138,178232..178324,178507..178587,178806..178926,179040..179106,179227..179356,179441..179491)	Acanthamoeba castellanii str. Neff	14916888
ACA1_178210	CDS	ACA1_178210	NW_004457410.1	179777	180787	R	encoded by transcript ACA1_178210A; Hypothetical protein	complement(join(179777..180321,180598..180787))	Acanthamoeba castellanii str. Neff	14916889
ACA1_178220	CDS	ACA1_178220	NW_004457410.1	181019	181922	D	encoded by transcript ACA1_178220A; uncharacterized protein	join(181019..181087,181208..181323,181517..181631,181755..181922)	Acanthamoeba castellanii str. Neff	14916890
ACA1_178230	CDS	ACA1_178230	NW_004457410.1	182135	185466	D	encoded by transcript ACA1_178230A; transducin family protein	join(182135..182167,182482..182522,182743..182851,182942..182962,183281..183408,183564..183614,183733..183875,183990..184164,184366..184460,184587..184735,184872..185031,185124..185278,185344..185466)	Acanthamoeba castellanii str. Neff	14916891
ACA1_178240	CDS	ACA1_178240	NW_004457410.1	185592	188653	R	encoded by transcript ACA1_178240A; fasciclin domain containing protein	complement(join(185592..185734,185823..185997,186099..186241,186281..186458,186620..186730,186904..187012,187118..187228,187275..187394,187572..187734,187892..187937,188176..188291,188418..188493,188615..188653))	Acanthamoeba castellanii str. Neff	14916892
ACA1_178250	CDS	ACA1_178250	NW_004457410.1	188864	190844	R	encoded by transcript ACA1_178250A; uncharacterized protein	complement(join(188864..189046,189169..189291,189535..189597,189839..190048,190154..190407,190568..190844))	Acanthamoeba castellanii str. Neff	14916893
ACA1_178260	CDS	ACA1_178260	NW_004457410.1	191637	194142	D	encoded by transcript ACA1_178260A; cytochrome P450, putative	join(191637..191720,191776..191891,191927..191963,192133..192177,192343..192468,192564..192782,192952..193114,193266..193291,193412..193606,193697..193859,193946..194142)	Acanthamoeba castellanii str. Neff	14916894
ACA1_178270	CDS	ACA1_178270	NW_004457410.1	194375	195165	D	encoded by transcript ACA1_178270A; Rasrelated protein O-RAL, putative	join(194375..194403,194646..194715,194800..195165)	Acanthamoeba castellanii str. Neff	14916895
ACA1_178280	CDS	ACA1_178280	NW_004457410.1	198401	202749	R	encoded by transcript ACA1_178280A; pentatricopeptide repeat domain/PPR repeatcontaining protein	complement(join(198401..198406,198545..198600,198684..198782,198945..199335,199524..199645,199753..199852,200147..200211,200320..200416,200649..200792,200814..200897,200976..201100,201484..201592,201704..201859,202152..202466,202597..202749))	Acanthamoeba castellanii str. Neff	14916896
ACA1_178290	CDS	ACA1_178290	NW_004457410.1	203314	204642	R	encoded by transcript ACA1_178290A; peptide chain release factor eRF/aRF, subunit 1, putative	complement(203314..204642)	Acanthamoeba castellanii str. Neff	14916897
ACA1_178300	CDS	ACA1_178300	NW_004457410.1	204864	209139	R	encoded by transcript ACA1_178300A; protein kinase domain containing protein	complement(join(204864..205106,205196..205292,205413..205506,205588..205649,205754..205865,206030..206153,206283..206356,206494..206608,206754..206838,206930..206995,207091..207160,207291..207405,207608..207707,207791..207915,208079..208154,208358..208489,208659..208911,209070..209139))	Acanthamoeba castellanii str. Neff	14916898
ACA1_178310	CDS	ACA1_178310	NW_004457410.1	209430	213130	R	encoded by transcript ACA1_178310A; ubiquitin domain containing protein	complement(join(209430..209503,209627..209777,209892..210027,210214..210274,210367..210502,210633..210737,210866..211235,211326..211462,211692..211837,211974..212006,212108..212246,212441..212562,212673..212799,212924..213130))	Acanthamoeba castellanii str. Neff	14916787
ACA1_178320	CDS	ACA1_178320	NW_004457410.1	213411	214421	D	encoded by transcript ACA1_178320A; 40S ribosomal protein S9	join(213411..213547,213675..213857,213976..214051,214177..214232,214319..214421)	Acanthamoeba castellanii str. Neff	14916788
ACA1_178330	CDS	ACA1_178330	NW_004457410.1	214544	216033	R	encoded by transcript ACA1_178330A; methyltransferase, FkbM subfamily protein	complement(join(214544..214741,214894..215025,215154..215357,215479..216033))	Acanthamoeba castellanii str. Neff	14916789
ACA1_178340	CDS	ACA1_178340	NW_004457410.1	216513	224199	D	encoded by transcript ACA1_178340A; RhoGEF domain containing protein	join(216513..218036,218166..218283,218625..218772,218944..219018,219060..220545,220563..220734,220905..220927,221064..221176,221332..221427,221531..221588,221616..221714,221796..221856,221969..222102,222220..222348,222491..222598,222755..222805,222968..223060,223234..223329,223463..223553,223680..223856,223943..224007,224098..224199)	Acanthamoeba castellanii str. Neff	14916790
ACA1_178350	CDS	ACA1_178350	NW_004457410.1	224818	226328	R	encoded by transcript ACA1_178350A; regulator of chromosome condensation (RCC1) repeat domain containing protein	complement(join(224818..225053,225138..225311,225401..225501,226015..226126,226244..>226328))	Acanthamoeba castellanii str. Neff	14916791
ACA1_178460	CDS	ACA1_178460	NW_004457410.1	228128	230689	R	encoded by transcript ACA1_178460A; PAP/25A associated domain containing protein	complement(join(228128..228544,228652..228702,228880..228984,229155..229295,229469..229539,229662..229723,229906..229952,230069..230195,230295..230689))	Acanthamoeba castellanii str. Neff	14916792
ACA1_178470	CDS	ACA1_178470	NW_004457410.1	230782	236246	R	encoded by transcript ACA1_178470A; uncharacterized protein	complement(join(230782..231127,231218..231375,231542..231671,231803..231948,232054..232334,232432..232588,232714..232877,233040..233097,233171..233233,233342..233515,233648..233785,233931..233998,234111..234315,234437..234518,234688..234833,234924..235092,235237..235301,235408..235589,235655..235865,235998..236246))	Acanthamoeba castellanii str. Neff	14916793
ACA1_178480	CDS	ACA1_178480	NW_004457410.1	236412	240593	D	encoded by transcript ACA1_178480A; nucleoporin, putative	join(236412..236472,236733..237126,237196..237472,237547..237596,237692..237821,237889..238036,238131..238195,238256..238396,238474..238595,238676..238775,238880..239043,239132..239204,239286..239550,239658..239816,239892..240161,240270..240363,240449..240593)	Acanthamoeba castellanii str. Neff	14916794
ACA1_178490	CDS	ACA1_178490	NW_004457410.1	241169	244309	D	encoded by transcript ACA1_178490A; RasGEF domain containing protein	join(241169..241953,242123..242279,242437..242464,242597..242920,243015..243219,243310..243471,243589..243721,243862..244056,244178..244309)	Acanthamoeba castellanii str. Neff	14916795
ACA1_178500	CDS	ACA1_178500	NW_004457410.1	244730	249896	R	encoded by transcript ACA1_178500A; coppertranslocating P-type ATPase	complement(join(244730..244968,245088..245231,245316..245428,245517..245631,245748..246477,246554..246720,246812..246962,247075..247183,247280..247448,247594..247939,248034..248153,248267..248819,248912..249036,249141..249896))	Acanthamoeba castellanii str. Neff	14916796
ACA1_178510	CDS	ACA1_178510	NW_004457410.1	250013	251675	R	encoded by transcript ACA1_178510A; endonuclease/exonuclease/phosphatase family protein	complement(join(250013..250264,250405..250542,250688..250760,250904..251009,251116..251300,251383..251675))	Acanthamoeba castellanii str. Neff	14916797
ACA1_178520	CDS	ACA1_178520	NW_004457410.1	252125	253681	D	encoded by transcript ACA1_178520A; RhoGAP domain containing protein	join(252125..252218,252254..252308,252455..252543,252637..252769,252889..253002,253112..253329,253404..253681)	Acanthamoeba castellanii str. Neff	14916798
ACA1_178530	CDS	ACA1_178530	NW_004457410.1	253822	254813	R	encoded by transcript ACA1_178530A; dual specificity phosphatase, catalytic domain containing protein	complement(join(253822..253919,253994..254103,254235..254362,254497..254623,254734..254813))	Acanthamoeba castellanii str. Neff	14916799
ACA1_178540	CDS	ACA1_178540	NW_004457410.1	254978	257918	R	encoded by transcript ACA1_178540A; Ubiquitin carboxylterminal hydrolase	complement(join(254978..255089,255168..255287,255472..255602,255682..255858,255943..256082,256170..256339,256550..256620,256756..256853,256938..257568,257619..257918))	Acanthamoeba castellanii str. Neff	14916800
ACA1_178550	CDS	ACA1_178550	NW_004457410.1	258207	259076	D	encoded by transcript ACA1_178550A; eukaryotic translation initiation factor 3 subunit k, putative	join(258207..258476,258564..258714,258838..259076)	Acanthamoeba castellanii str. Neff	14916801
ACA1_178560	CDS	ACA1_178560	NW_004457410.1	259183	259583	D	encoded by transcript ACA1_178560A; transmembrane proteins 14c protein	join(259183..259426,259516..259583)	Acanthamoeba castellanii str. Neff	14916864
ACA1_178570	CDS	ACA1_178570	NW_004457410.1	259634	260347	R	encoded by transcript ACA1_178570A; SH3 domain containing protein	complement(259634..260347)	Acanthamoeba castellanii str. Neff	14916865
ACA1_178580	CDS	ACA1_178580	NW_004457410.1	260536	262553	R	encoded by transcript ACA1_178580A; F-box domain containing protein	complement(join(260536..260746,260837..260982,261083..261190,261261..261343,261646..261782,261905..261994,262058..262261,262375..262553))	Acanthamoeba castellanii str. Neff	14916866
ACA1_178590	CDS	ACA1_178590	NW_004457410.1	262804	263644	D	encoded by transcript ACA1_178590A; uncharacterized protein	join(262804..263142,263318..263644)	Acanthamoeba castellanii str. Neff	14916867
ACA1_178700	CDS	ACA1_178700	NW_004457410.1	263873	266796	R	encoded by transcript ACA1_178700A; EGFlike domain containing protein	complement(join(263873..264092,264180..264321,264443..264600,264717..264754,264806..264856,264941..265056,265193..265285,265399..265507,265578..265780,265877..265919,265934..265983,266081..266380,266484..266601,266695..266796))	Acanthamoeba castellanii str. Neff	14916868
ACA1_178710	CDS	ACA1_178710	NW_004457410.1	267025	268075	R	encoded by transcript ACA1_178710A; ADPribosylation factor related protein 1, putative	complement(join(267025..267088,267169..267275,267362..267426,267492..267576,267652..267713,267816..267900,267983..268075))	Acanthamoeba castellanii str. Neff	14916869
ACA1_178720	CDS	ACA1_178720	NW_004457410.1	268370	270153	D	encoded by transcript ACA1_178720A; pseudouridine synthase Rsu, putative	join(268370..268723,268825..268911,269025..269138,269246..269368,269397..269441,269459..269676,269754..269837,269994..270153)	Acanthamoeba castellanii str. Neff	14916870
ACA1_178730	CDS	ACA1_178730	NW_004457410.1	270244	272314	D	encoded by transcript ACA1_178730A; histidine acid phosphatase superfamily protein	join(270244..270491,270587..270795,270916..271136,271234..271294,271324..271412,271464..271529,271607..271892,272022..272314)	Acanthamoeba castellanii str. Neff	14916871
ACA1_178740	CDS	ACA1_178740	NW_004457410.1	273008	275169	R	encoded by transcript ACA1_178740A; replication factora protein 1 (rpa1) subfamily protein	complement(join(273008..273256,273379..274513,274803..274943,275033..275169))	Acanthamoeba castellanii str. Neff	14916872
ACA1_178750	CDS	ACA1_178750	NW_004457410.1	275471	277118	R	encoded by transcript ACA1_178750A; PCI domain containing protein	complement(join(275471..275863,275954..276073,276161..276241,276322..276669,276732..277118))	Acanthamoeba castellanii str. Neff	14916873
ACA1_178760	CDS	ACA1_178760	NW_004457410.1	277683	282116	D	encoded by transcript ACA1_178760A; uncharacterized protein	join(277683..277828,277946..278095,278202..278321,278425..278612,278707..278848,278960..279149,279280..279342,279456..279648,279730..279857,279973..280158,280267..280461,280548..280819,280947..281076,281413..281580,281655..281780,281853..282116)	Acanthamoeba castellanii str. Neff	14916874
ACA1_178890	CDS	ACA1_178890	NW_004457410.1	288115	288785	D	encoded by transcript ACA1_178890A; uncharacterized protein	join(288115..288327,288416..288526,288678..288785)	Acanthamoeba castellanii str. Neff	14916877
ACA1_179000	CDS	ACA1_179000	NW_004457410.1	289470	290059	D	encoded by transcript ACA1_179000A; uncharacterized protein	join(289470..289616,289731..289921,289969..290059)	Acanthamoeba castellanii str. Neff	14916878
ACA1_179110	CDS	ACA1_179110	NW_004457410.1	294308	297677	D	encoded by transcript ACA1_179110A; putative phospholipidtransporting ATPase ID (ATPase class I type 8B member 2), putative	join(294308..294383,294504..294685,294769..295171,295265..295323,295457..295606,295689..295788,295814..296097,296202..296285,296393..296458,296533..296631,296721..296818,296888..297100,297204..297346,297442..297677)	Acanthamoeba castellanii str. Neff	14916879
ACA1_179120	CDS	ACA1_179120	NW_004457410.1	297921	299913	D	encoded by transcript ACA1_179120A; MHC I Cterminus family protein	join(297921..298058,298251..298340,298675..298755,298833..298931,299295..299375,299482..299580,299866..299913)	Acanthamoeba castellanii str. Neff	14916880
ACA1_179130	CDS	ACA1_179130	NW_004457410.1	300428	308188	D	encoded by transcript ACA1_179130A; protein kinase domain containing protein	join(<300428..300547,300648..300812,300901..300990,301093..301212,301314..301432,301574..301712,301826..301938,302078..302326,302522..302699,302778..302918,303039..303116,303298..303442,303547..303695,303805..304006,304066..304298,304412..304572,304658..304944,305016..305117,305231..305298,305405..305522,305600..305773,305884..306425,306537..306584,306662..306790,306943..307041,307243..307365,307578..307685,307778..307939,308027..308188)	Acanthamoeba castellanii str. Neff	14916881
ACA1_179140	CDS	ACA1_179140	NW_004457410.1	308314	308885	D	encoded by transcript ACA1_179140A; Ras subfamily protein	join(308314..308510,308616..308691,308736..308885)	Acanthamoeba castellanii str. Neff	14916882
ACA1_179160	CDS	ACA1_179160	NW_004457410.1	311979	313591	D	encoded by transcript ACA1_179160A; uncharacterized protein	join(311979..312107,312218..312712,312835..312928,313035..313119,313284..313382,313519..313591)	Acanthamoeba castellanii str. Neff	14916846
ACA1_179170	CDS	ACA1_179170	NW_004457410.1	313757	314532	R	encoded by transcript ACA1_179170A; uncharacterized protein	complement(join(313757..313922,314004..314227,314301..314434,314505..314532))	Acanthamoeba castellanii str. Neff	14916847
ACA1_179180	CDS	ACA1_179180	NW_004457410.1	317116	317396	D	encoded by transcript ACA1_179180A; uncharacterized protein	join(317116..317327,317357..317396)	Acanthamoeba castellanii str. Neff	14916848
ACA1_179190	CDS	ACA1_179190	NW_004457410.1	318495	319443	D	encoded by transcript ACA1_179190A; uncharacterized protein	join(318495..318934,319065..319213,319286..319443)	Acanthamoeba castellanii str. Neff	14916849
ACA1_179200	CDS	ACA1_179200	NW_004457410.1	319764	320264	D	encoded by transcript ACA1_179200A; uncharacterized protein	join(319764..319932,320029..320264)	Acanthamoeba castellanii str. Neff	14916850
ACA1_179210	CDS	ACA1_179210	NW_004457410.1	320806	326727	D	encoded by transcript ACA1_179210A; midasin family protein	join(320806..320913,320994..321320,321414..321655,321743..322112,322194..322278,322373..322485,322572..322773,322869..322988,323059..323342,323421..323588,323663..323974,324074..324466,324561..324818,324952..325325,325458..325848,325939..326276,326361..326727)	Acanthamoeba castellanii str. Neff	14916851
ACA1_303620	CDS	ACA1_303620	NW_004457409.1	10061	11090	D	encoded by transcript ACA1_303620A; MORN motifcontaining protein	join(10061..11028,11048..11090)	Acanthamoeba castellanii str. Neff	14916786
ACA1_025520	CDS	ACA1_025520	NW_004457408.1	21	4495	R	encoded by transcript ACA1_025520A; talin, putative	complement(join(<21..412,486..719,806..1149,1258..1618,1717..1986,2063..2547,2624..3278,3381..3545,3629..3788,3913..4005,4080..4171,4363..4495))	Acanthamoeba castellanii str. Neff	14916784
ACA1_025530	CDS	ACA1_025530	NW_004457408.1	4961	6801	D	encoded by transcript ACA1_025530A; von Willebrand factor type A domain containing protein	join(4961..5081,5167..5579,5675..6077,6155..6348,6425..6553,6628..6801)	Acanthamoeba castellanii str. Neff	14916785
ACA1_025540	CDS	ACA1_025540	NW_004457408.1	7038	9270	D	encoded by transcript ACA1_025540A; uncharacterized protein	join(7038..7108,7196..7249,7327..7399,7496..7569,7647..7789,7897..8002,8084..8199,8288..8451,8536..8637,8735..8814,8957..9115,9192..9270)	Acanthamoeba castellanii str. Neff	14916783
ACA1_025550	CDS	ACA1_025550	NW_004457408.1	9350	10833	D	encoded by transcript ACA1_025550A; L1P family protein	join(9350..9397,9491..9592,9642..9844,9941..10003,10145..10305,10372..10566,10667..10833)	Acanthamoeba castellanii str. Neff	14916780
ACA1_025560	CDS	ACA1_025560	NW_004457408.1	10990	15243	R	encoded by transcript ACA1_025560A; uncharacterized protein	complement(join(10990..11091,11218..11711,11785..11956,12112..12327,12412..12471,12553..12915,13189..13305,13404..13489,13765..13829,13905..14048,14123..14272,14353..14459,14582..14754,14847..15062,15144..15243))	Acanthamoeba castellanii str. Neff	14916781
ACA1_025570	CDS	ACA1_025570	NW_004457408.1	15937	17706	D	encoded by transcript ACA1_025570A; uncharacterized protein	join(15937..16070,16150..16251,16337..16485,16547..16671,16768..16957,17039..17578,17666..17706)	Acanthamoeba castellanii str. Neff	14916782
ACA1_331090	CDS	ACA1_331090	NW_004457407.1	1570	2012	R	encoded by transcript ACA1_331090A; uncharacterized protein	complement(join(<1570..1638,1718..1819,1902..2012))	Acanthamoeba castellanii str. Neff	14916770
ACA1_331100	CDS	ACA1_331100	NW_004457407.1	2094	2339	D	encoded by transcript ACA1_331100A; uncharacterized protein	2094..2339	Acanthamoeba castellanii str. Neff	14916771
ACA1_331110	CDS	ACA1_331110	NW_004457407.1	2497	3538	R	encoded by transcript ACA1_331110A; RAP1A, member of RAS oncogene family	complement(join(2497..2741,2821..2887,2980..3060,3141..3232,3337..3387,3475..3538))	Acanthamoeba castellanii str. Neff	14916776
ACA1_331120	CDS	ACA1_331120	NW_004457407.1	4664	6321	D	encoded by transcript ACA1_331120A; Mitochondrial carrier protein	join(4664..4691,4909..5009,5131..5295,5377..5524,5604..5729,5798..5917,6042..6134,6194..6321)	Acanthamoeba castellanii str. Neff	14916773
ACA1_331230	CDS	ACA1_331230	NW_004457407.1	6629	9111	D	encoded by transcript ACA1_331230A; uncharacterized protein	join(6629..6736,6803..7077,7147..7336,7423..7497,7577..7626,7703..7784,7895..8005,8083..8185,8326..8412,8487..8536,8621..8717,8783..8851,8963..9111)	Acanthamoeba castellanii str. Neff	14916779
ACA1_331240	CDS	ACA1_331240	NW_004457407.1	9196	10338	R	encoded by transcript ACA1_331240A; alkylated DNA repair protein	complement(join(9196..9460,9533..9726,9824..10130,10196..10338))	Acanthamoeba castellanii str. Neff	14916775
ACA1_331250	CDS	ACA1_331250	NW_004457407.1	10616	11467	D	encoded by transcript ACA1_331250A; uncharacterized protein	join(10616..10687,10777..10856,11120..11225,11318..>11467)	Acanthamoeba castellanii str. Neff	14916774
ACA1_331360	CDS	ACA1_331360	NW_004457407.1	14806	16458	D	encoded by transcript ACA1_331360A; EAP30/Vps36 family protein	join(14806..14871,14963..15109,15184..15235,15383..15754,15887..15994,16129..16256,16378..16458)	Acanthamoeba castellanii str. Neff	14916777
ACA1_331370	CDS	ACA1_331370	NW_004457407.1	16555	19653	R	encoded by transcript ACA1_331370A; succinylglutamate desuccinylase/aspartoacylase subfamily protein	complement(join(16555..16709,16783..16930,17012..17092,17181..17386,17517..17583,17727..17945,18061..18179,18300..18418,18508..18605,18689..18788,18883..19281,19349..19464,19531..19653))	Acanthamoeba castellanii str. Neff	14916778
ACA1_331480	CDS	ACA1_331480	NW_004457407.1	23839	24615	R	encoded by transcript ACA1_331480A; membraneassociated ring finger (C3HC4) 2, putative	complement(join(<23839..24194,24268..24442,24517..>24615))	Acanthamoeba castellanii str. Neff	14916772
ACA1_221470	CDS	ACA1_221470	NW_004457406.1	261	768	D	encoded by transcript ACA1_221470A; uncharacterized protein	join(261..587,613..768)	Acanthamoeba castellanii str. Neff	14916697
ACA1_221480	CDS	ACA1_221480	NW_004457406.1	1786	2532	R	encoded by transcript ACA1_221480A; uncharacterized protein	complement(1786..2532)	Acanthamoeba castellanii str. Neff	14916692
ACA1_221590	CDS	ACA1_221590	NW_004457406.1	3505	3777	R	encoded by transcript ACA1_221590A; uncharacterized protein	complement(3505..3777)	Acanthamoeba castellanii str. Neff	14916721
ACA1_221600	CDS	ACA1_221600	NW_004457406.1	3868	4548	D	encoded by transcript ACA1_221600A; uncharacterized protein	3868..4548	Acanthamoeba castellanii str. Neff	14916722
ACA1_221610	CDS	ACA1_221610	NW_004457406.1	4992	5712	R	encoded by transcript ACA1_221610A; uncharacterized protein	complement(join(4992..5104,5200..5344,5428..5513,5604..>5712))	Acanthamoeba castellanii str. Neff	14916723
ACA1_221620	CDS	ACA1_221620	NW_004457406.1	5796	7079	R	encoded by transcript ACA1_221620A; uncharacterized protein	complement(join(5796..5851,5952..6022,6137..6240,6380..6445,6540..6646,6738..6813,6912..7079))	Acanthamoeba castellanii str. Neff	14916717
ACA1_221630	CDS	ACA1_221630	NW_004457406.1	8994	9939	R	encoded by transcript ACA1_221630A; uncharacterized protein	complement(join(8994..9597,9659..9820,9875..9939))	Acanthamoeba castellanii str. Neff	14916718
ACA1_221640	CDS	ACA1_221640	NW_004457406.1	12371	12622	D	encoded by transcript ACA1_221640A; uncharacterized protein	join(12371..12592,12614..12622)	Acanthamoeba castellanii str. Neff	14916719
ACA1_221650	CDS	ACA1_221650	NW_004457406.1	13242	15386	D	encoded by transcript ACA1_221650A; R3H domain containing protein	join(13242..13261,13273..13550,13640..13821,13940..13993,14295..14780,14843..15096,15335..15386)	Acanthamoeba castellanii str. Neff	14916720
ACA1_221760	CDS	ACA1_221760	NW_004457406.1	16474	16978	D	encoded by transcript ACA1_221760A; uncharacterized protein	join(16474..16904,16954..16978)	Acanthamoeba castellanii str. Neff	14916752
ACA1_221770	CDS	ACA1_221770	NW_004457406.1	16909	17455	R	encoded by transcript ACA1_221770A; 3hydroxyanthranilate 3,4-dioxygenase	complement(join(16909..16957,17197..17270,17357..17455))	Acanthamoeba castellanii str. Neff	14916753
ACA1_221780	CDS	ACA1_221780	NW_004457406.1	18290	20724	D	encoded by transcript ACA1_221780A; uncharacterized protein	join(18290..18805,19083..19943,20131..20256,20407..20724)	Acanthamoeba castellanii str. Neff	14916754
ACA1_222090	CDS	ACA1_222090	NW_004457406.1	24323	25279	R	encoded by transcript ACA1_222090A; uncharacterized protein	complement(join(24323..25082,25215..25279))	Acanthamoeba castellanii str. Neff	14916755
ACA1_222100	CDS	ACA1_222100	NW_004457406.1	27842	28583	R	encoded by transcript ACA1_222100A; uncharacterized protein	complement(join(27842..27894,27915..28472,28574..28583))	Acanthamoeba castellanii str. Neff	14916756
ACA1_222310	CDS	ACA1_222310	NW_004457406.1	31415	31708	R	encoded by transcript ACA1_222310A; tubulin gamma chain	complement(join(31415..31490,31584..31708))	Acanthamoeba castellanii str. Neff	14916757
ACA1_222320	CDS	ACA1_222320	NW_004457406.1	32052	34506	D	encoded by transcript ACA1_222320A; CDP-alcohol phosphatidyltransferase superfamily protein	join(<32052..32356,32449..32506,32641..32721,32876..32974,33050..33153,33260..33354,33460..33568,33681..33771,33859..33951,34074..34174,34293..34506)	Acanthamoeba castellanii str. Neff	14916758
ACA1_222330	CDS	ACA1_222330	NW_004457406.1	35182	39286	D	encoded by transcript ACA1_222330A; phosphate ABC transporter, phosphatebinding protein PstS, putative	join(35182..35239,35343..35442,35613..35673,35791..35928,36022..36330,36402..36715,36805..37402,37475..37618,37777..37915,38000..38147,38390..38900,38958..39074,39161..39286)	Acanthamoeba castellanii str. Neff	14916759
ACA1_222540	CDS	ACA1_222540	NW_004457406.1	42066	43584	D	encoded by transcript ACA1_222540A; uncharacterized protein	join(42066..42212,42304..42455,42524..42647,42880..43021,43095..43258,43391..>43584)	Acanthamoeba castellanii str. Neff	14916665
ACA1_222650	CDS	ACA1_222650	NW_004457406.1	44161	47499	R	encoded by transcript ACA1_222650A; uncharacterized protein	complement(join(<44161..44297,44493..44553,44682..45006,45097..45152,45278..45841,45965..46021,46092..46551,46644..46766,46860..47221,47285..47499))	Acanthamoeba castellanii str. Neff	14916666
ACA1_222660	CDS	ACA1_222660	NW_004457406.1	47994	48320	D	encoded by transcript ACA1_222660A; uncharacterized protein	join(47994..48043,48068..48320)	Acanthamoeba castellanii str. Neff	14916667
ACA1_222670	CDS	ACA1_222670	NW_004457406.1	48384	49862	R	encoded by transcript ACA1_222670A; galactosyl transferase GMA12/MNN10 family protein	complement(join(48384..48593,48697..48848,48972..49104,49250..49409,49573..49862))	Acanthamoeba castellanii str. Neff	14916668
ACA1_222680	CDS	ACA1_222680	NW_004457406.1	50271	52378	R	encoded by transcript ACA1_222680A; FADbinding domain containing protein	complement(join(50271..50336,50367..50554,50618..50762,50864..50979,51046..51215,51308..51443,51550..51805,51917..52025,52119..52378))	Acanthamoeba castellanii str. Neff	14916669
ACA1_222690	CDS	ACA1_222690	NW_004457406.1	52668	58786	R	encoded by transcript ACA1_222690A; RecF/RecN/SMC domain containing protein	complement(join(52668..52859,52971..53066,53165..53336,53458..53529,53597..53652,53760..53839,53960..54305,54396..54495,54578..54709,54845..54954,55042..55160,55266..55337,55404..55497,55595..55672,55747..55826,55899..55997,56125..56186,56250..56361,56447..56521,56603..56705,56800..56947,57039..57151,57255..57313,57391..57455,57525..57603,57704..57807,57916..58028,58093..58165,58264..58461,58540..58582,58729..58786))	Acanthamoeba castellanii str. Neff	14916670
ACA1_222700	CDS	ACA1_222700	NW_004457406.1	58959	60518	R	encoded by transcript ACA1_222700A; peptidase S8 and S53 subtilisin kexin sedolisin, putative	complement(join(58959..59712,59798..60013,60095..60212,60280..60369,60455..60518))	Acanthamoeba castellanii str. Neff	14916671
ACA1_222710	CDS	ACA1_222710	NW_004457406.1	60900	62090	R	encoded by transcript ACA1_222710A; serine rich protein	complement(join(60900..61026,61086..61328,61425..61543,61610..61684,61812..62090))	Acanthamoeba castellanii str. Neff	14916724
ACA1_222720	CDS	ACA1_222720	NW_004457406.1	62536	64250	R	encoded by transcript ACA1_222720A; shortchain dehydrogenase/reductase SDR, putative	complement(join(62536..62693,62775..62867,62994..63069,63159..63215,63341..63466,63573..63648,63705..63831,63916..64015,64104..64250))	Acanthamoeba castellanii str. Neff	14916725
ACA1_222730	CDS	ACA1_222730	NW_004457406.1	64925	66692	R	encoded by transcript ACA1_222730A; UDPglucose pyrophosphorylase 2, putative	complement(join(64925..65655,65786..65988,66034..66122,66228..>66692))	Acanthamoeba castellanii str. Neff	14916726
ACA1_222740	CDS	ACA1_222740	NW_004457406.1	67610	72372	D	encoded by transcript ACA1_222740A; HEAT repeat-containing protein	join(67610..68074,68243..68302,68379..68447,68563..68685,68761..68835,68913..69113,69130..69292,69388..69647,69772..69876,69959..70156,70284..70404,70486..70676,70785..70929,71065..71223,71337..71460,71526..71646,71741..71908,72121..72153,72286..72372)	Acanthamoeba castellanii str. Neff	14916727
ACA1_222750	CDS	ACA1_222750	NW_004457406.1	72501	73424	D	encoded by transcript ACA1_222750A; uncharacterized protein	join(72501..72552,72625..72711,72876..72970,73088..73179,73280..73424)	Acanthamoeba castellanii str. Neff	14916728
ACA1_222760	CDS	ACA1_222760	NW_004457406.1	73960	74511	D	encoded by transcript ACA1_222760A; uncharacterized protein	join(73960..74022,74150..74379,74469..74511)	Acanthamoeba castellanii str. Neff	14916729
ACA1_222770	CDS	ACA1_222770	NW_004457406.1	74682	79892	D	encoded by transcript ACA1_222770A; YDG/SRA domain containing protein	join(74682..75075,75183..75237,75305..75368,75439..75469,75542..75637,75726..75805,75936..76008,76127..76210,76340..76413,76502..76603,76715..76832,76959..77040,77172..77409,77504..77559,77642..77747,77834..78588,78721..78847,78990..79090,79123..79135,79199..79312,79484..79757,79846..79892)	Acanthamoeba castellanii str. Neff	14916730
ACA1_222780	CDS	ACA1_222780	NW_004457406.1	80112	82059	R	encoded by transcript ACA1_222780A; metal cation transporter, ZIP subfamily protein	complement(join(80112..80210,80379..80461,80566..80689,80811..80959,81049..81133,81397..81426,81554..81750,81879..82059))	Acanthamoeba castellanii str. Neff	14916731
ACA1_222790	CDS	ACA1_222790	NW_004457406.1	82404	84223	R	encoded by transcript ACA1_222790A; uncharacterized protein	complement(join(82404..82487,82604..82703,82852..82914,83004..83146,83276..83456,83587..83659,83742..83897,83930..84071,84140..84223))	Acanthamoeba castellanii str. Neff	14916760
ACA1_222800	CDS	ACA1_222800	NW_004457406.1	84410	84766	R	encoded by transcript ACA1_222800A; uncharacterized protein	complement(84410..84766)	Acanthamoeba castellanii str. Neff	14916761
ACA1_222910	CDS	ACA1_222910	NW_004457406.1	85042	85278	R	encoded by transcript ACA1_222910A; uncharacterized protein	complement(85042..85278)	Acanthamoeba castellanii str. Neff	14916762
ACA1_222920	CDS	ACA1_222920	NW_004457406.1	85805	86755	R	encoded by transcript ACA1_222920A; PH domain containing protein	complement(join(85805..85843,85906..86078,86163..86187,86362..86438,86524..86755))	Acanthamoeba castellanii str. Neff	14916763
ACA1_222930	CDS	ACA1_222930	NW_004457406.1	86958	87253	R	encoded by transcript ACA1_222930A; uncharacterized protein	complement(join(86958..87105,87243..87253))	Acanthamoeba castellanii str. Neff	14916764
ACA1_223040	CDS	ACA1_223040	NW_004457406.1	88244	93911	R	encoded by transcript ACA1_223040A; protein kinase domain containing protein	complement(join(88244..88342,88455..88550,88625..88747,88835..89044,89121..89213,89305..89378,89448..89475,89617..89668,89737..89827,90002..90072,90159..90307,90406..90534,90804..90883,90987..91046,91170..91258,91333..91409,91474..91541,91717..91789,92000..92176,92211..92419,92499..92763,92824..93270,93337..93410,93491..93584,93694..93757,93904..93911))	Acanthamoeba castellanii str. Neff	14916765
ACA1_223050	CDS	ACA1_223050	NW_004457406.1	94400	94917	R	encoded by transcript ACA1_223050A; ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	complement(join(94400..94558,94693..94917))	Acanthamoeba castellanii str. Neff	14916766
ACA1_223060	CDS	ACA1_223060	NW_004457406.1	95279	96737	R	encoded by transcript ACA1_223060A; uncharacterized protein	complement(join(95279..95286,95380..95500,95566..95656,95731..95817,95909..96039,96137..96223,96284..96366,96492..96582,96654..96737))	Acanthamoeba castellanii str. Neff	14916767
ACA1_223070	CDS	ACA1_223070	NW_004457406.1	96836	98966	D	encoded by transcript ACA1_223070A; uncharacterized protein	join(96836..96886,97014..97136,97236..97396,97459..97574,97668..97718,97907..97994,98092..98224,98307..98435,98552..98651,98797..98966)	Acanthamoeba castellanii str. Neff	14916768
ACA1_223080	CDS	ACA1_223080	NW_004457406.1	99087	100885	R	encoded by transcript ACA1_223080A; PX domain containing protein	complement(join(99087..99173,99323..99381,99466..99523,99606..99823,99921..100137,100222..100345,100482..100687,100763..100885))	Acanthamoeba castellanii str. Neff	14916769
ACA1_223190	CDS	ACA1_223190	NW_004457406.1	101744	101986	R	encoded by transcript ACA1_223190A; uncharacterized protein	complement(101744..101986)	Acanthamoeba castellanii str. Neff	14916698
ACA1_223200	CDS	ACA1_223200	NW_004457406.1	102503	102721	R	encoded by transcript ACA1_223200A; uncharacterized protein	complement(102503..102721)	Acanthamoeba castellanii str. Neff	14916699
ACA1_223220	CDS	ACA1_223220	NW_004457406.1	103998	105888	R	encoded by transcript ACA1_223220A; Protein-tyrosine-phosphatase	complement(join(103998..104145,104291..104490,104638..104692,104750..104815,104914..105065,105135..105361,105517..105591,105717..105888))	Acanthamoeba castellanii str. Neff	14916701
ACA1_223230	CDS	ACA1_223230	NW_004457406.1	106199	108099	R	encoded by transcript ACA1_223230A; uncharacterized protein	complement(join(106199..106324,106464..106556,106649..106753,106899..107028,107130..107295,107406..107484,107547..107599,107736..107859,107959..108099))	Acanthamoeba castellanii str. Neff	14916702
ACA1_223240	CDS	ACA1_223240	NW_004457406.1	108175	112302	R	encoded by transcript ACA1_223240A; HEAT repeat domain containing protein	complement(join(108175..108279,108352..108538,108638..108807,108901..109069,109159..109306,109389..109627,109716..109844,109928..110136,110312..110409,110487..110589,110703..111123,111245..111374,111463..111537,111642..111757,111853..111914,111988..112302))	Acanthamoeba castellanii str. Neff	14916703
ACA1_223260	CDS	ACA1_223260	NW_004457406.1	116182	116532	D	encoded by transcript ACA1_223260A; uncharacterized protein	join(116182..116216,116286..116532)	Acanthamoeba castellanii str. Neff	14916705
ACA1_223270	CDS	ACA1_223270	NW_004457406.1	116582	116987	D	encoded by transcript ACA1_223270A; uncharacterized protein	join(116582..116662,116812..116941,116965..116987)	Acanthamoeba castellanii str. Neff	14916706
ACA1_223280	CDS	ACA1_223280	NW_004457406.1	117485	118717	R	encoded by transcript ACA1_223280A; cytochrome c1, putative	complement(join(117485..117837,117900..118129,118236..118435,118679..118717))	Acanthamoeba castellanii str. Neff	14916707
ACA1_223290	CDS	ACA1_223290	NW_004457406.1	119042	120835	R	encoded by transcript ACA1_223290A; K+ channel tetramerization subfamily protein	complement(join(119042..119190,119282..119401,119482..119577,119655..119794,119884..119941,120130..120361,120474..120551,120758..120835))	Acanthamoeba castellanii str. Neff	14916708
ACA1_223300	CDS	ACA1_223300	NW_004457406.1	121536	125949	D	encoded by transcript ACA1_223300A; coatomer subunit beta'2, putative	join(121536..121547,121637..121911,121926..122032,122158..122363,122492..122613,122725..122859,122997..123229,123342..123491,123611..123867,123951..124247,124382..124506,124603..124789,124929..125173,125277..125397,125505..125607,125771..125949)	Acanthamoeba castellanii str. Neff	14916709
ACA1_223310	CDS	ACA1_223310	NW_004457406.1	126108	129216	R	encoded by transcript ACA1_223310A; amidohydrolase superfamily protein	complement(join(126108..126296,126382..126503,126621..126677,126770..126860,127008..127174,127285..127392,127494..127556,127718..127825,127903..128007,128165..128282,128364..128520,128651..128736,128816..128881,128956..129216))	Acanthamoeba castellanii str. Neff	14916710
ACA1_223320	CDS	ACA1_223320	NW_004457406.1	129855	131203	D	encoded by transcript ACA1_223320A; NCS1/frequenin-related protein	join(129855..129885,130074..130167,130272..130325,130436..130542,130683..130756,130860..130995,131097..131203)	Acanthamoeba castellanii str. Neff	14916711
ACA1_223330	CDS	ACA1_223330	NW_004457406.1	131423	133152	D	encoded by transcript ACA1_223330A; peptidase S8 and S53 subtilisin kexin sedolisin, putative	join(131423..131534,131636..131725,131844..131961,132052..132151,132232..132320,132390..133152)	Acanthamoeba castellanii str. Neff	14916712
ACA1_223340	CDS	ACA1_223340	NW_004457406.1	133354	135446	R	encoded by transcript ACA1_223340A; uncharacterized protein	complement(join(133354..133646,133743..133809,133918..134032,134116..134195,134305..134404,134492..135248,135380..135446))	Acanthamoeba castellanii str. Neff	14916713
ACA1_223350	CDS	ACA1_223350	NW_004457406.1	135706	138925	D	encoded by transcript ACA1_223350A; F-box domain containing protein	join(135706..135926,136073..136514,136636..136743,136839..136932,137078..137168,137202..137248,137290..137375,137510..137620,137782..137872,137998..138077,138185..138324,138434..138588,138667..138734,138815..138925)	Acanthamoeba castellanii str. Neff	14916714
ACA1_223460	CDS	ACA1_223460	NW_004457406.1	139649	140914	D	encoded by transcript ACA1_223460A; Ca2+/calmodulin-dependent protein kinase	join(139649..139748,140268..140914)	Acanthamoeba castellanii str. Neff	14916715
ACA1_223570	CDS	ACA1_223570	NW_004457406.1	141577	143671	D	encoded by transcript ACA1_223570A; protein kinase domain containing protein	join(141577..141730,141785..141794,142091..142181,142309..142494,142643..142957,143045..143106,143234..143348,143474..143671)	Acanthamoeba castellanii str. Neff	14916716
ACA1_223680	CDS	ACA1_223680	NW_004457406.1	143942	148277	D	encoded by transcript ACA1_223680A; uncharacterized protein	join(143942..143963,144176..144252,144423..145730,147042..147928,148013..148277)	Acanthamoeba castellanii str. Neff	14916672
ACA1_223790	CDS	ACA1_223790	NW_004457406.1	148217	149087	R	encoded by transcript ACA1_223790A; Saccharopine dehydrogenase (NAD+, Llysine-forming), putative protein	complement(join(148217..148273,148382..148529,148634..148719,148812..148899,149083..149087))	Acanthamoeba castellanii str. Neff	14916673
ACA1_223900	CDS	ACA1_223900	NW_004457406.1	149086	149968	D	encoded by transcript ACA1_223900A; CRAL/TRIO domain containing protein	join(149086..149309,149395..149525,149636..149695,149787..149968)	Acanthamoeba castellanii str. Neff	14916675
ACA1_223910	CDS	ACA1_223910	NW_004457406.1	150491	151456	R	encoded by transcript ACA1_223910A; helicase associated domain containing protein	complement(150491..151456)	Acanthamoeba castellanii str. Neff	14916674
ACA1_223920	CDS	ACA1_223920	NW_004457406.1	151601	152640	R	encoded by transcript ACA1_223920A; saccharopine dehydrogenase (nad+, l-lysine forming), putative	complement(join(151601..151792,151942..152054,152313..152402,152475..152640))	Acanthamoeba castellanii str. Neff	14916676
ACA1_223930	CDS	ACA1_223930	NW_004457406.1	153246	155130	D	encoded by transcript ACA1_223930A; actin subfamily protein	join(153246..153357,153478..153651,153762..153914,154014..154193,154304..154551,154662..154866,154964..155130)	Acanthamoeba castellanii str. Neff	14916677
ACA1_224040	CDS	ACA1_224040	NW_004457406.1	155416	156290	R	encoded by transcript ACA1_224040A; uncharacterized protein	complement(join(<155416..155604,155699..155819,155906..155968,156088..156121,156179..156290))	Acanthamoeba castellanii str. Neff	14916678
ACA1_224050	CDS	ACA1_224050	NW_004457406.1	156331	156693	R	encoded by transcript ACA1_224050A; uncharacterized protein	complement(156331..156693)	Acanthamoeba castellanii str. Neff	14916679
ACA1_224160	CDS	ACA1_224160	NW_004457406.1	158406	159181	D	encoded by transcript ACA1_224160A; uncharacterized protein	join(<158406..158534,158652..158804,158903..159181)	Acanthamoeba castellanii str. Neff	14916680
ACA1_224170	CDS	ACA1_224170	NW_004457406.1	159263	160873	R	encoded by transcript ACA1_224170A; RapGAP/RanGAP domain containing protein	complement(join(159263..159366,159447..159509,159753..159828,159904..160086,160221..160327,160561..160873))	Acanthamoeba castellanii str. Neff	14916681
ACA1_224180	CDS	ACA1_224180	NW_004457406.1	161201	161487	R	encoded by transcript ACA1_224180A; uncharacterized protein	complement(join(161201..161326,161385..161468,161479..161487))	Acanthamoeba castellanii str. Neff	14916682
ACA1_224290	CDS	ACA1_224290	NW_004457406.1	163754	164929	R	encoded by transcript ACA1_224290A; complex I intermediateassociated CIA30 protein	complement(join(163754..163879,163936..164019,164102..164206,164283..164339,164428..164552,164653..164775,164884..>164929))	Acanthamoeba castellanii str. Neff	14916683
ACA1_224300	CDS	ACA1_224300	NW_004457406.1	165169	165867	D	encoded by transcript ACA1_224300A; EF1 guanine nucleotide exchange domain containing protein	165169..165867	Acanthamoeba castellanii str. Neff	14916684
ACA1_224310	CDS	ACA1_224310	NW_004457406.1	166152	168215	D	encoded by transcript ACA1_224310A; PH domain containing protein	join(166152..166379,166474..166536,166617..166677,166745..166829,166958..167043,167149..167219,167308..167426,167524..167569,167682..167771,167849..167962,168063..168215)	Acanthamoeba castellanii str. Neff	14916685
ACA1_224330	CDS	ACA1_224330	NW_004457406.1	169200	170812	D	encoded by transcript ACA1_224330A; electron transport complex, RnfABCDGE type, D subunit	join(169200..169502,169619..169782,169891..170010,170032..170109,170202..170386,170461..170494,170547..170675,170746..170812)	Acanthamoeba castellanii str. Neff	14916687
ACA1_224340	CDS	ACA1_224340	NW_004457406.1	171047	174502	D	encoded by transcript ACA1_224340A; importin beta subunit	join(171047..171086,171150..171208,171295..171477,171550..171603,171679..171822,171882..172034,172094..172240,172319..172429,172498..172599,172662..172836,172893..173131,173214..173320,173389..173738,173811..174502)	Acanthamoeba castellanii str. Neff	14916688
ACA1_224350	CDS	ACA1_224350	NW_004457406.1	175378	176652	D	encoded by transcript ACA1_224350A; uncharacterized protein	join(175378..175591,175684..176281,176380..176514,176601..176652)	Acanthamoeba castellanii str. Neff	14916689
ACA1_224360	CDS	ACA1_224360	NW_004457406.1	177141	179825	D	encoded by transcript ACA1_224360A; 1pyrroline-5-carboxylate dehydrogenase	join(177141..177162,177232..177305,177377..177463,177540..177713,177830..178001,178063..178284,178361..178496,178581..178651,178755..179060,179150..179218,179311..179446,179514..179587,179656..179825)	Acanthamoeba castellanii str. Neff	14916690
ACA1_224370	CDS	ACA1_224370	NW_004457406.1	179972	186696	R	encoded by transcript ACA1_224370A; Exportin 1like protein	complement(join(179972..180070,180104..180242,180378..180546,180648..180762,180853..180961,181097..181156,181303..181409,181585..181720,181853..181943,182040..182107,182208..182335,182450..182590,182771..182860,182951..183005,183107..183354,183496..183591,183666..183725,183830..183936,184000..184066,184161..184274,184379..184601,184709..184956,185033..185095,185190..185256,185374..185449,185544..185730,185877..186014,186140..186250,186352..186435,186643..186696))	Acanthamoeba castellanii str. Neff	14916691
ACA1_224380	CDS	ACA1_224380	NW_004457406.1	186873	188910	D	encoded by transcript ACA1_224380A; uncharacterized protein	join(186873..187754,187832..187909,187991..188097,188176..188273,188396..188483,188568..188717,188790..188910)	Acanthamoeba castellanii str. Neff	14916650
ACA1_224390	CDS	ACA1_224390	NW_004457406.1	189204	192078	R	encoded by transcript ACA1_224390A; uncharacterized protein	complement(join(189204..189277,189405..189814,189839..190114,190197..190300,190409..190663,190761..190904,191032..191396,191474..191867,192022..192078))	Acanthamoeba castellanii str. Neff	14916651
ACA1_224400	CDS	ACA1_224400	NW_004457406.1	192531	193991	D	encoded by transcript ACA1_224400A; TolAlike protein	join(192531..192704,192862..192978,193135..193198,193299..193459,193541..193648,193731..193991)	Acanthamoeba castellanii str. Neff	14916652
ACA1_224410	CDS	ACA1_224410	NW_004457406.1	194673	197258	D	encoded by transcript ACA1_224410A; uncharacterized protein	join(194673..195137,195233..195278,195431..195560,195652..195844,195952..196047,196127..196339,196417..196556,196616..197258)	Acanthamoeba castellanii str. Neff	14916653
ACA1_224420	CDS	ACA1_224420	NW_004457406.1	197253	198327	R	encoded by transcript ACA1_224420A; COMM domain containing protein 1, putative	complement(join(197253..197479,197541..197709,197837..197899,197969..198090,198195..198327))	Acanthamoeba castellanii str. Neff	14916654
ACA1_224430	CDS	ACA1_224430	NW_004457406.1	198498	199758	D	encoded by transcript ACA1_224430A; uncharacterized protein	join(198498..198658,198787..198899,199034..199161,199255..199364,199424..199539,199652..199758)	Acanthamoeba castellanii str. Neff	14916655
ACA1_224440	CDS	ACA1_224440	NW_004457406.1	200736	201122	R	encoded by transcript ACA1_224440A; copialike protein	complement(<200736..201122)	Acanthamoeba castellanii str. Neff	14916656
ACA1_224450	CDS	ACA1_224450	NW_004457406.1	201198	201723	D	encoded by transcript ACA1_224450A; uncharacterized protein	join(201198..201327,201396..201472,201679..201723)	Acanthamoeba castellanii str. Neff	14916657
ACA1_224460	CDS	ACA1_224460	NW_004457406.1	202084	202650	R	encoded by transcript ACA1_224460A; uncharacterized protein	complement(join(202084..202346,202359..202650))	Acanthamoeba castellanii str. Neff	14916658
ACA1_224470	CDS	ACA1_224470	NW_004457406.1	203493	208812	D	encoded by transcript ACA1_224470A; ABC transporter, ATPbinding domain containing protein	join(203493..203582,203706..203787,203872..204010,204117..204240,204353..204448,204585..204744,204885..204981,205124..205199,205346..205434,205520..205649,205727..206397,206504..206625,206801..206969,207058..207220,207240..207518,207575..207664,207787..207931,208048..208254,208365..208666,208807..208812)	Acanthamoeba castellanii str. Neff	14916659
ACA1_224480	CDS	ACA1_224480	NW_004457406.1	208836	210166	D	encoded by transcript ACA1_224480A; uncharacterized protein	join(208836..208965,209038..209174,209331..209828,209933..210166)	Acanthamoeba castellanii str. Neff	14916660
ACA1_224490	CDS	ACA1_224490	NW_004457406.1	210304	212955	R	encoded by transcript ACA1_224490A; cytidyltransferaserelated domain containing protein	complement(join(210304..210386,210487..210580,210658..210848,210973..211168,211290..211368,211530..211633,211779..211865,211988..212125,212263..212359,212460..212557,212734..212955))	Acanthamoeba castellanii str. Neff	14916661
ACA1_224500	CDS	ACA1_224500	NW_004457406.1	213409	219665	R	encoded by transcript ACA1_224500A; phospholipidtranslocating P-type ATPase family protein	complement(join(213409..213566,213685..213794,213920..214004,214098..214213,214394..214535,214656..214749,214871..214981,215103..215196,215307..215556,215665..215797,215992..216105,216212..216304,216386..216475,216580..216690,216787..217046,217058..217102,217194..217293,217408..217629,217745..217855,217966..218071,218164..218291,218380..218475,218569..218662,218766..218891,218990..219072,219291..219665))	Acanthamoeba castellanii str. Neff	14916662
ACA1_224510	CDS	ACA1_224510	NW_004457406.1	220080	220715	R	encoded by transcript ACA1_224510A; uncharacterized protein	complement(220080..220715)	Acanthamoeba castellanii str. Neff	14916663
ACA1_224530	CDS	ACA1_224530	NW_004457406.1	221878	222675	R	encoded by transcript ACA1_224530A; uncharacterized protein	complement(221878..222675)	Acanthamoeba castellanii str. Neff	14916732
ACA1_224540	CDS	ACA1_224540	NW_004457406.1	223153	224429	D	encoded by transcript ACA1_224540A; uncharacterized protein	join(223153..223247,223341..223424,223650..223747,223841..223955,224063..224429)	Acanthamoeba castellanii str. Neff	14916733
ACA1_224550	CDS	ACA1_224550	NW_004457406.1	224496	227101	D	encoded by transcript ACA1_224550A; Fbox domain containing protein	join(224496..224632,224763..224914,224998..225065,225211..225275,225416..225522,225703..225748,225863..226131,226215..226417,226497..226528,226612..226635,226721..226748,226856..227101)	Acanthamoeba castellanii str. Neff	14916734
ACA1_224560	CDS	ACA1_224560	NW_004457406.1	227496	235299	D	encoded by transcript ACA1_224560A; phosphate ABC transporter, phosphatebinding protein PstS, putative	join(227496..227574,227682..227755,227828..227911,228081..228212,228298..228691,228777..229059,229167..229336,229418..229530,229632..229859,230034..230292,230404..230548,230670..231303,231336..231452,231567..231725,231866..232068,232230..232248,232401..232653,232723..232936,233008..233163,233323..233470,233570..233678,233855..234204,234290..234458,234575..235299)	Acanthamoeba castellanii str. Neff	14916735
ACA1_224570	CDS	ACA1_224570	NW_004457406.1	235380	235861	R	encoded by transcript ACA1_224570A; uncharacterized protein	complement(join(235380..235383,235469..235651,235719..235861))	Acanthamoeba castellanii str. Neff	14916736
ACA1_224580	CDS	ACA1_224580	NW_004457406.1	236176	236828	R	encoded by transcript ACA1_224580A; uncharacterized protein	complement(join(236176..236398,236488..236828))	Acanthamoeba castellanii str. Neff	14916737
ACA1_224690	CDS	ACA1_224690	NW_004457406.1	238758	241709	D	encoded by transcript ACA1_224690A; DEAD/DEAH box helicase domain containing protein	join(238758..239486,239520..241709)	Acanthamoeba castellanii str. Neff	14916738
ACA1_224700	CDS	ACA1_224700	NW_004457406.1	241812	242330	R	encoded by transcript ACA1_224700A; uncharacterized protein	complement(241812..242330)	Acanthamoeba castellanii str. Neff	14916739
ACA1_224710	CDS	ACA1_224710	NW_004457406.1	242483	243263	R	encoded by transcript ACA1_224710A; universal stress domain containing protein	complement(join(242483..242597,242738..242814,242957..243067,243171..243263))	Acanthamoeba castellanii str. Neff	14916740
ACA1_224720	CDS	ACA1_224720	NW_004457406.1	243661	244091	D	encoded by transcript ACA1_224720A; uncharacterized protein	join(243661..243804,243921..244091)	Acanthamoeba castellanii str. Neff	14916741
ACA1_224840	CDS	ACA1_224840	NW_004457406.1	251459	253056	R	encoded by transcript ACA1_224840A; uncharacterized protein	complement(join(251459..251647,252043..252123,252137..252172,252219..252328,252418..252737,252968..253056))	Acanthamoeba castellanii str. Neff	14916743
ACA1_224850	CDS	ACA1_224850	NW_004457406.1	253625	254489	D	encoded by transcript ACA1_224850A; galactosebinding domain containing protein	join(253625..253668,253781..253871,253977..254054,254167..254241,254373..254489)	Acanthamoeba castellanii str. Neff	14916744
ACA1_224860	CDS	ACA1_224860	NW_004457406.1	254791	263653	D	encoded by transcript ACA1_224860A; myosin head (motor domain) domain containing protein	join(254791..254820,254929..255039,255185..255341,255466..255552,255628..255651,255678..255787,255865..255945,256053..256191,256315..256434,256512..256688,256787..256931,257030..257222,257306..257532,257631..257722,257829..258001,258139..258285,258379..258576,258677..258809,258889..259057,259163..259388,259465..259595,259680..260976,261082..261188,261261..261358,261371..261653,261778..261892,261983..262126,262267..262423,262554..263653)	Acanthamoeba castellanii str. Neff	14916745
ACA1_224870	CDS	ACA1_224870	NW_004457406.1	263995	265756	D	encoded by transcript ACA1_224870A; X7, putative	join(263995..264075,264151..264280,264469..264569,264749..264862,264960..265268,265382..265494,265573..265756)	Acanthamoeba castellanii str. Neff	14916746
ACA1_224880	CDS	ACA1_224880	NW_004457406.1	267624	268439	D	encoded by transcript ACA1_224880A; uncharacterized protein	join(267624..267770,268019..268094,268164..268253,268333..268439)	Acanthamoeba castellanii str. Neff	14916747
ACA1_224890	CDS	ACA1_224890	NW_004457406.1	269734	270283	R	encoded by transcript ACA1_224890A; uncharacterized protein	complement(join(269734..269754,269915..270283))	Acanthamoeba castellanii str. Neff	14916748
ACA1_224900	CDS	ACA1_224900	NW_004457406.1	270727	272013	D	encoded by transcript ACA1_224900A; uncharacterized protein	join(270727..271025,271179..272013)	Acanthamoeba castellanii str. Neff	14916749
ACA1_224910	CDS	ACA1_224910	NW_004457406.1	273720	275093	D	encoded by transcript ACA1_224910A; NAD dependent epimerase/dehydratase superfamily protein	join(273720..273753,273838..274050,274165..274678,274756..274894,274986..275093)	Acanthamoeba castellanii str. Neff	14916750
ACA1_224920	CDS	ACA1_224920	NW_004457406.1	275157	281598	R	encoded by transcript ACA1_224920A; uncharacterized protein	complement(join(275157..277552,277633..277898,277993..278134,278213..278379,278481..278718,278867..278989,279129..279215,279300..279379,279478..279766,279888..280023,280109..280200,280308..280404,280503..280628,280759..280918,281041..281111,281221..281598))	Acanthamoeba castellanii str. Neff	14916751
ACA1_224930	CDS	ACA1_224930	NW_004457406.1	282864	283738	D	encoded by transcript ACA1_224930A; uncharacterized protein	join(282864..283474,283540..283738)	Acanthamoeba castellanii str. Neff	14916693
ACA1_224940	CDS	ACA1_224940	NW_004457406.1	286402	288882	D	encoded by transcript ACA1_224940A; uncharacterized protein	join(286402..286937,286965..287083,287099..287193,287323..288882)	Acanthamoeba castellanii str. Neff	14916694
ACA1_224950	CDS	ACA1_224950	NW_004457406.1	289021	292212	R	encoded by transcript ACA1_224950A; Fbox domain containing protein	complement(join(289021..289358,289491..289626,289722..289814,289923..290101,290214..290313,290390..290473,290589..290825,290911..291047,291147..291300,291465..291648,291718..291808,291966..292212))	Acanthamoeba castellanii str. Neff	14916695
ACA1_225060	CDS	ACA1_225060	NW_004457406.1	292299	296585	R	encoded by transcript ACA1_225060A; PH domain containing protein	complement(join(292299..292419,292489..292611,292694..292838,292947..293313,293728..293814,293898..294038,294156..294341,294439..294508,294611..294726,294823..295236,295343..295380,295453..295600,295673..295759,295872..295979,296095..296141,296213..296449,296564..296585))	Acanthamoeba castellanii str. Neff	14916696
ACA1_002890	CDS	ACA1_002890	NW_004457405.1	400	989	D	encoded by transcript ACA1_002890A; uncharacterized protein	join(400..792,875..>989)	Acanthamoeba castellanii str. Neff	14916644
ACA1_003000	CDS	ACA1_003000	NW_004457405.1	2444	7810	R	encoded by transcript ACA1_003000A; uncharacterized protein	complement(join(2444..2462,2512..3578,7018..7502,7675..7810))	Acanthamoeba castellanii str. Neff	14916645
ACA1_003110	CDS	ACA1_003110	NW_004457405.1	10678	12316	R	encoded by transcript ACA1_003110A; Acetylcholinesterase	complement(join(10678..11070,11954..12316))	Acanthamoeba castellanii str. Neff	14916643
ACA1_003220	CDS	ACA1_003220	NW_004457405.1	12746	17531	D	encoded by transcript ACA1_003220A; Serine/threonine kinase	join(12746..13351,13546..14309,14797..15688,16944..17531)	Acanthamoeba castellanii str. Neff	14916647
ACA1_003530	CDS	ACA1_003530	NW_004457405.1	18571	18968	R	encoded by transcript ACA1_003530A; uncharacterized protein	complement(join(18571..18820,18898..18968))	Acanthamoeba castellanii str. Neff	14916646
ACA1_003640	CDS	ACA1_003640	NW_004457405.1	23435	23876	D	encoded by transcript ACA1_003640A; uncharacterized protein	join(<23435..23566,23673..23876)	Acanthamoeba castellanii str. Neff	14916648
ACA1_003650	CDS	ACA1_003650	NW_004457405.1	24521	26549	R	encoded by transcript ACA1_003650A; EXS family protein	complement(join(24521..24526,24588..24683,24817..24930,25010..25132,25268..25346,25437..25524,25624..25717,25782..25917,25957..26012,26115..26255,26334..26549))	Acanthamoeba castellanii str. Neff	14916649
ACA1_082740	CDS	ACA1_082740	NW_004457404.1	3906	6711	D	encoded by transcript ACA1_082740A; uncharacterized protein	join(3906..3954,4016..4153,4243..4806,4891..5195,5359..5707,5834..6165,6278..6483,6570..6711)	Acanthamoeba castellanii str. Neff	14916640
ACA1_082750	CDS	ACA1_082750	NW_004457404.1	8489	9511	D	encoded by transcript ACA1_082750A; GCN5related N-acetyltransferase	join(8489..8669,8736..8799,8883..9008,9106..9212,9309..9511)	Acanthamoeba castellanii str. Neff	14916641
ACA1_082860	CDS	ACA1_082860	NW_004457404.1	11954	13963	R	encoded by transcript ACA1_082860A; peptidase S9, prolyl oligopeptidase active site region, putative	complement(join(<11954..12128,12201..12298,12367..12457,12562..12639,12735..12864,12960..13049,13173..13286,13422..13520,13643..13736,13835..13963))	Acanthamoeba castellanii str. Neff	14916642
ACA1_031510	CDS	ACA1_031510	NW_004457402.1	83	1871	R	encoded by transcript ACA1_031510A; uncharacterized protein	complement(join(<83..216,319..409,759..852,930..1041,1151..1244,1356..1429,1581..1670,1775..1871))	Acanthamoeba castellanii str. Neff	14916624
ACA1_031520	CDS	ACA1_031520	NW_004457402.1	2062	3592	R	encoded by transcript ACA1_031520A; mitochondrial carnitine/acylcarnitine carrier protein	complement(join(2062..2188,2269..2336,2430..2510,2577..2704,2833..2893,2955..3157,3272..3354,3417..3592))	Acanthamoeba castellanii str. Neff	14916622
ACA1_031530	CDS	ACA1_031530	NW_004457402.1	3866	5156	R	encoded by transcript ACA1_031530A; carbohydrate binding domain cbm49 protein	complement(join(3866..4669,4704..5156))	Acanthamoeba castellanii str. Neff	14916623
ACA1_031540	CDS	ACA1_031540	NW_004457402.1	5809	7284	D	encoded by transcript ACA1_031540A; CBS domain containing protein	join(5809..5916,6018..6142,6223..6395,6503..6641,6720..6811,6894..7034,7113..7228,7252..7284)	Acanthamoeba castellanii str. Neff	14916630
ACA1_031560	CDS	ACA1_031560	NW_004457402.1	11192	12296	D	encoded by transcript ACA1_031560A; Nacetyltransferase	join(11192..11429,11624..11998,12145..12296)	Acanthamoeba castellanii str. Neff	14916632
ACA1_031570	CDS	ACA1_031570	NW_004457402.1	12404	17140	R	encoded by transcript ACA1_031570A; DNA mismatch repair protein msh2, putative	complement(join(12404..12517,12605..12734,12812..13025,13119..13204,13275..13420,13506..13588,13686..13939,14012..14075,14177..14255,14355..14426,14489..14584,14670..14840,14937..15053,15143..15282,15361..15471,15558..15678,15783..15844,15919..16120,16207..16293,16364..16474,16565..16698,16782..16863,16948..17018,17080..17140))	Acanthamoeba castellanii str. Neff	14916633
ACA1_031580	CDS	ACA1_031580	NW_004457402.1	17274	18358	R	encoded by transcript ACA1_031580A; uncharacterized protein	complement(join(17274..17279,17365..18054,18143..18358))	Acanthamoeba castellanii str. Neff	14916634
ACA1_031590	CDS	ACA1_031590	NW_004457402.1	18630	19748	D	encoded by transcript ACA1_031590A; uncharacterized protein	18630..19748	Acanthamoeba castellanii str. Neff	14916625
ACA1_031600	CDS	ACA1_031600	NW_004457402.1	19829	23851	R	encoded by transcript ACA1_031600A; leucine rich repeat-containing protein	complement(join(19829..19988,20083..20604,20677..21493,21558..21698,21798..21966,22102..22241,22309..22426,22525..22688,22755..22863,22938..23098,23183..23434,23528..23623,23686..23742,23830..23851))	Acanthamoeba castellanii str. Neff	14916626
ACA1_031610	CDS	ACA1_031610	NW_004457402.1	24087	26029	R	encoded by transcript ACA1_031610A; uncharacterized protein	complement(join(24087..24225,24317..24426,24496..24621,24712..24889,24959..25054,25130..25275,25370..25585,25604..26029))	Acanthamoeba castellanii str. Neff	14916627
ACA1_031620	CDS	ACA1_031620	NW_004457402.1	26437	29863	R	encoded by transcript ACA1_031620A; prenylcysteine lyase, putative	complement(join(26437..26549,26641..26746,26819..26885,26973..27048,27374..27446,27511..27578,27643..27724,27815..27897,27964..28038,28108..28191,28256..28319,28378..28484,28546..28677,28755..28826,28973..29038,29209..29255,29315..29403,29472..29575,29650..29863))	Acanthamoeba castellanii str. Neff	14916628
ACA1_031630	CDS	ACA1_031630	NW_004457402.1	30171	33872	D	encoded by transcript ACA1_031630A; EMP/nonaspanin domain family protein	join(30171..30216,30322..30485,30547..30656,30725..30779,30843..30902,30975..31123,31214..31272,31343..31416,31502..31611,31690..31783,31845..31962,32052..32133,32242..32317,32416..32494,32578..32678,32746..32810,33354..33477,33562..33691,33763..33872)	Acanthamoeba castellanii str. Neff	14916629
ACA1_031640	CDS	ACA1_031640	NW_004457402.1	33999	38161	R	encoded by transcript ACA1_031640A; hydrolase, alpha/beta fold domain containing protein	complement(join(33999..34455,34558..34712,34806..34926,35038..35231,35335..35444,35583..35651,35744..35832,35919..36005,36151..36249,36355..36773,36899..37381,37440..37682,37850..38161))	Acanthamoeba castellanii str. Neff	14916635
ACA1_031650	CDS	ACA1_031650	NW_004457402.1	38437	39880	R	encoded by transcript ACA1_031650A; endonuclease/exonuclease/phosphatase family protein	complement(join(38437..38953,39040..39142,39244..39317,39407..39516,39661..39718,39798..39880))	Acanthamoeba castellanii str. Neff	14916636
ACA1_031660	CDS	ACA1_031660	NW_004457402.1	40415	42090	R	encoded by transcript ACA1_031660A; Catalase, putative	complement(join(40415..41124,41209..41535,41664..42090))	Acanthamoeba castellanii str. Neff	14916637
ACA1_031670	CDS	ACA1_031670	NW_004457402.1	42421	45781	D	encoded by transcript ACA1_031670A; TIMbarrel protein, putative	join(42421..42596,42676..42775,42887..43017,43116..43201,43304..43398,43513..43904,44231..44476,44566..44659,44779..44862,44973..45042,45140..45351,45432..45597,45678..45781)	Acanthamoeba castellanii str. Neff	14916638
ACA1_031680	CDS	ACA1_031680	NW_004457402.1	46452	46808	R	encoded by transcript ACA1_031680A; uncharacterized protein	complement(join(46452..46502,46570..46649,46730..46808))	Acanthamoeba castellanii str. Neff	14916639
ACA1_321730	CDS	ACA1_321730	NW_004457401.1	6053	8517	D	encoded by transcript ACA1_321730A; 4aminobutyrate aminotransferase	join(6053..6149,6323..6453,6549..6666,6797..7035,7171..7329,7413..7523,7643..7848,7928..8277,8390..8517)	Acanthamoeba castellanii str. Neff	14916618
ACA1_321740	CDS	ACA1_321740	NW_004457401.1	9604	12252	R	encoded by transcript ACA1_321740A; Prokumamolisin, activation domain containing protein	complement(join(9604..9665,9768..9809,9920..10132,10199..10302,10408..10477,10565..10718,10908..10983,11077..11266,11355..11519,11640..12252))	Acanthamoeba castellanii str. Neff	14916619
ACA1_321750	CDS	ACA1_321750	NW_004457401.1	12574	13896	D	encoded by transcript ACA1_321750A; uncharacterized protein	12574..13896	Acanthamoeba castellanii str. Neff	14916620
ACA1_321760	CDS	ACA1_321760	NW_004457401.1	13978	15553	R	encoded by transcript ACA1_321760A; haloacid dehalogenaselike hydrolase domain containing protein	complement(join(13978..14116,14198..14265,14348..14414,14493..14544,14609..14750,14883..15174,15260..15404,15478..15553))	Acanthamoeba castellanii str. Neff	14916617
ACA1_321770	CDS	ACA1_321770	NW_004457401.1	15885	16373	R	encoded by transcript ACA1_321770A; uncharacterized protein	complement(15885..16373)	Acanthamoeba castellanii str. Neff	14916613
ACA1_321780	CDS	ACA1_321780	NW_004457401.1	16759	20394	R	encoded by transcript ACA1_321780A; protein kinase domain containing protein	complement(join(16759..16950,17105..17584,17698..17861,17985..18079,18189..18324,18440..18575,18645..18752,18836..18959,19073..19164,19278..19548,19661..19780,19872..19970,20039..20394))	Acanthamoeba castellanii str. Neff	14916614
ACA1_321790	CDS	ACA1_321790	NW_004457401.1	21249	26013	D	encoded by transcript ACA1_321790A; protein phosphatase 2C domain containing protein	join(21249..22047,22146..23086,23170..24411,24530..24703,24798..24845,24920..25125,25197..25342,25429..25470,25541..25628,25710..25812,25909..26013)	Acanthamoeba castellanii str. Neff	14916615
ACA1_321800	CDS	ACA1_321800	NW_004457401.1	26134	28689	D	encoded by transcript ACA1_321800A; tetratricopeptide repeat domain containing protein	join(26134..26224,26291..26372,26439..26524,26627..26705,26780..26893,26982..27177,27264..27394,27491..27706,27809..27876,27964..28111,28200..28329,28429..28514,28584..>28689)	Acanthamoeba castellanii str. Neff	14916616
ACA1_015690	CDS	ACA1_015690	NW_004457400.1	93	545	R	encoded by transcript ACA1_015690A; uncharacterized protein	complement(<93..545)	Acanthamoeba castellanii str. Neff	14916612
ACA1_015800	CDS	ACA1_015800	NW_004457400.1	5323	8089	R	encoded by transcript ACA1_015800A; SPRY domain containing protein	complement(join(5323..5612,5709..5935,6061..6290,6413..6545,6683..6711,6808..7067,7211..7423,7520..7614,7953..8089))	Acanthamoeba castellanii str. Neff	14916608
ACA1_016010	CDS	ACA1_016010	NW_004457400.1	12874	13639	R	encoded by transcript ACA1_016010A; uncharacterized protein	complement(join(12874..13106,13164..13409,13522..13639))	Acanthamoeba castellanii str. Neff	14916609
ACA1_016020	CDS	ACA1_016020	NW_004457400.1	13737	14510	R	encoded by transcript ACA1_016020A; uncharacterized protein	complement(join(13737..14084,14214..14510))	Acanthamoeba castellanii str. Neff	14916610
ACA1_297990	CDS	ACA1_297990	NW_004457399.1	6505	6969	D	encoded by transcript ACA1_297990A; uncharacterized protein	join(6505..6925,6944..6969)	Acanthamoeba castellanii str. Neff	14916607
ACA1_298100	CDS	ACA1_298100	NW_004457399.1	11180	11546	D	encoded by transcript ACA1_298100A; uncharacterized protein	join(11180..11186,11286..11383,11466..11546)	Acanthamoeba castellanii str. Neff	14916604
ACA1_298110	CDS	ACA1_298110	NW_004457399.1	12921	13308	D	encoded by transcript ACA1_298110A; uncharacterized protein	join(12921..13192,13284..13308)	Acanthamoeba castellanii str. Neff	14916605
ACA1_298220	CDS	ACA1_298220	NW_004457399.1	13608	15319	D	encoded by transcript ACA1_298220A; uncharacterized protein	join(13608..13714,13992..14056,14385..14476,14741..14770,14855..14935,15065..>15319)	Acanthamoeba castellanii str. Neff	14916606
ACA1_023380	CDS	ACA1_023380	NW_004457398.1	943	1351	D	encoded by transcript ACA1_023380A; uncharacterized protein	join(943..1134,1241..1351)	Acanthamoeba castellanii str. Neff	14916594
ACA1_023390	CDS	ACA1_023390	NW_004457398.1	1962	6375	R	encoded by transcript ACA1_023390A; ALG3 protein	complement(join(1962..1982,2886..2993,3082..3132,3245..3314,3488..3580,3667..3731,3906..3976,4057..4164,4316..4480,6089..6169,6264..6375))	Acanthamoeba castellanii str. Neff	14916592
ACA1_023700	CDS	ACA1_023700	NW_004457398.1	6487	6915	R	encoded by transcript ACA1_023700A; uncharacterized protein	complement(6487..>6915)	Acanthamoeba castellanii str. Neff	14916593
ACA1_023810	CDS	ACA1_023810	NW_004457398.1	11947	12507	R	encoded by transcript ACA1_023810A; eukaryotic initiation factor 5a, putative	complement(join(11947..12098,12189..12507))	Acanthamoeba castellanii str. Neff	14916595
ACA1_023820	CDS	ACA1_023820	NW_004457398.1	13140	16803	D	encoded by transcript ACA1_023820A; nuclease domain containing protein	join(13140..13607,13769..14959,15069..15846,15931..16190,16263..16501,16590..16803)	Acanthamoeba castellanii str. Neff	14916596
ACA1_023830	CDS	ACA1_023830	NW_004457398.1	17022	18222	R	encoded by transcript ACA1_023830A; uncharacterized protein	complement(join(17022..17227,17328..17616,17685..17893,18156..18222))	Acanthamoeba castellanii str. Neff	14916597
ACA1_023840	CDS	ACA1_023840	NW_004457398.1	18820	20733	D	encoded by transcript ACA1_023840A; uncharacterized protein	join(18820..18943,19006..19116,19220..19264,19385..19536,19649..19785,19936..20029,20127..20193,20267..20733)	Acanthamoeba castellanii str. Neff	14916598
ACA1_023850	CDS	ACA1_023850	NW_004457398.1	20919	24221	R	encoded by transcript ACA1_023850A; tyrosine kinase, putative	complement(join(20919..21254,21374..21467,21549..21635,21708..21784,21869..21943,22087..22182,22296..22412,22523..22642,22878..22993,23109..23196,23335..23435,23576..23653,23914..23964,24074..24221))	Acanthamoeba castellanii str. Neff	14916599
ACA1_023860	CDS	ACA1_023860	NW_004457398.1	24284	27019	R	encoded by transcript ACA1_023860A; uncharacterized protein	complement(join(24284..24581,24696..24754,24903..25036,25158..25285,25382..25457,25576..25692,25780..25835,25908..26019,26135..26224,26382..26473,26535..26586,26691..26753,26998..27019))	Acanthamoeba castellanii str. Neff	14916600
ACA1_023870	CDS	ACA1_023870	NW_004457398.1	27484	30172	R	encoded by transcript ACA1_023870A; peptidase, putative	complement(join(27484..27556,27643..27790,27886..28036,28143..28247,28360..28515,28624..28770,28871..28909,29054..29328,29444..29529,29605..29717,29894..30172))	Acanthamoeba castellanii str. Neff	14916601
ACA1_023880	CDS	ACA1_023880	NW_004457398.1	30373	31220	D	encoded by transcript ACA1_023880A; Mitochondrial 39S ribosomal protein L47	join(30373..30424,30497..30573,30706..30786,30911..31000,31092..31220)	Acanthamoeba castellanii str. Neff	14916602
ACA1_023890	CDS	ACA1_023890	NW_004457398.1	31500	34382	R	encoded by transcript ACA1_023890A; SAM domain (Sterile alpha motif) domain containing protein	complement(join(31500..31649,31745..31824,31924..31989,32102..32258,32340..32506,32626..32776,32929..33024,33092..33177,33276..33372,33486..33643,33753..33872,34226..34277,34377..34382))	Acanthamoeba castellanii str. Neff	14916603
ACA1_026700	CDS	ACA1_026700	NW_004457397.1	115	2728	D	encoded by transcript ACA1_026700A; serine/threonine protein kinase	join(115..218,337..467,568..746,886..993,1091..1182,1220..1374,1460..1593,1805..1888,1978..2061,2151..2325,2391..2450,2565..2728)	Acanthamoeba castellanii str. Neff	14916589
ACA1_026710	CDS	ACA1_026710	NW_004457397.1	3283	9465	D	encoded by transcript ACA1_026710A; formin domain containing protein	join(3283..3396,3625..3750,3857..4020,4139..4220,4313..4452,4627..4837,4992..5137,5240..5436,5559..5720,5992..6022,6167..6309,6396..6518,6635..6771,6840..6908,6998..7084,7211..7276,7386..7463,7579..7711,7806..7921,8058..8207,8337..8480,8625..8776,8903..8996,9098..9266,9368..9465)	Acanthamoeba castellanii str. Neff	14916590
ACA1_026720	CDS	ACA1_026720	NW_004457397.1	10072	13387	D	encoded by transcript ACA1_026720A; RasGEF domain containing protein	join(10072..10113,10325..10403,10798..10991,11100..11301,11391..11539,11887..12090,12245..12383,12510..13180,13286..>13387)	Acanthamoeba castellanii str. Neff	14916591
ACA1_187230	CDS	ACA1_187230	NW_004457396.1	6709	8492	R	encoded by transcript ACA1_187230A; uncharacterized protein	complement(join(6709..7254,7327..7482,7612..7818,7929..8014,8084..8405,8442..8492))	Acanthamoeba castellanii str. Neff	14916502
ACA1_187250	CDS	ACA1_187250	NW_004457396.1	11296	11903	R	encoded by transcript ACA1_187250A; uncharacterized protein	complement(<11296..11903)	Acanthamoeba castellanii str. Neff	14916588
ACA1_187260	CDS	ACA1_187260	NW_004457396.1	12438	14354	R	encoded by transcript ACA1_187260A; uncharacterized protein	complement(join(12438..12983,13056..13211,13311..13517,13622..13707,13795..14125,14316..14354))	Acanthamoeba castellanii str. Neff	14916500
ACA1_187270	CDS	ACA1_187270	NW_004457396.1	14819	16963	D	encoded by transcript ACA1_187270A; uncharacterized protein	14819..16963	Acanthamoeba castellanii str. Neff	14916501
ACA1_187280	CDS	ACA1_187280	NW_004457396.1	17705	19612	R	encoded by transcript ACA1_187280A; UTP-glucose-1-phosphate uridylyltransferase	complement(join(17705..18435,18573..18909,19039..19185,19196..19456,19517..19612))	Acanthamoeba castellanii str. Neff	14916584
ACA1_187290	CDS	ACA1_187290	NW_004457396.1	20119	22260	R	encoded by transcript ACA1_187290A; uncharacterized protein	complement(join(20119..20385,20446..20641,20723..20809,20870..21035,21183..21323,21435..21489,21600..21690,21779..21887,21954..22260))	Acanthamoeba castellanii str. Neff	14916585
ACA1_187300	CDS	ACA1_187300	NW_004457396.1	23378	27887	D	encoded by transcript ACA1_187300A; heme NO binding domain containing protein	join(23378..23407,23559..23705,23830..24009,24121..24226,24328..24446,24610..24768,24914..25093,25183..25335,25435..25663,25775..25959,26080..26269,26353..26495,26613..26819,26893..26968,27075..27241,27459..27656,27825..27887)	Acanthamoeba castellanii str. Neff	14916586
ACA1_187310	CDS	ACA1_187310	NW_004457396.1	28252	32669	D	encoded by transcript ACA1_187310A; heme NO binding domain containing protein	join(28252..28281,28511..28720,28863..28967,29060..29165,29240..29358,29436..29591,29701..29880,29980..30129,30252..30513,30610..30750,30868..31272,31361..31503,31681..31724,31876..32006,32102..32265,32383..32532,32604..32669)	Acanthamoeba castellanii str. Neff	14916587
ACA1_187320	CDS	ACA1_187320	NW_004457396.1	34629	37194	R	encoded by transcript ACA1_187320A; origin recognition complex subunit	complement(join(34629..34682,34769..34906,34993..35144,35264..35286,35310..35440,35638..35724,35787..35856,35932..36035,36123..36251,36382..36494,36567..36764,36856..36910,36978..37068,37145..37194))	Acanthamoeba castellanii str. Neff	14916504
ACA1_187330	CDS	ACA1_187330	NW_004457396.1	37402	38602	D	encoded by transcript ACA1_187330A; SAM (and some other nucleotide) binding motif domain containing protein	join(37402..37433,37501..37583,37687..37731,37821..37895,37980..38220,38299..38409,38482..38602)	Acanthamoeba castellanii str. Neff	14916505
ACA1_187340	CDS	ACA1_187340	NW_004457396.1	38693	41264	R	encoded by transcript ACA1_187340A; transporter, major facilitator subfamily protein	complement(join(38693..38859,38998..39108,39210..39349,39466..39608,39681..39737,39871..39996,40111..40272,40365..40426,40515..40596,40698..40800,40879..40939,41120..41264))	Acanthamoeba castellanii str. Neff	14916506
ACA1_187350	CDS	ACA1_187350	NW_004457396.1	41707	42651	R	encoded by transcript ACA1_187350A; uncharacterized protein	complement(join(41707..42180,42238..42420,42505..42651))	Acanthamoeba castellanii str. Neff	14916507
ACA1_187360	CDS	ACA1_187360	NW_004457396.1	42743	45532	R	encoded by transcript ACA1_187360A; Cys/Met metabolism PLPdependent enzyme superfamily protein	complement(join(42743..42943,43033..43199,43344..43430,43517..43784,43865..44025,44154..44237,44343..44511,44619..44751,44866..44941,45080..45158,45244..45422,45517..45532))	Acanthamoeba castellanii str. Neff	14916508
ACA1_187370	CDS	ACA1_187370	NW_004457396.1	45633	47608	D	encoded by transcript ACA1_187370A; RNA ligase, T4 RnlA family protein	join(45633..45761,45824..45897,45983..46086,46163..46478,46633..46711,46799..46859,46925..47077,47139..47608)	Acanthamoeba castellanii str. Neff	14916509
ACA1_187380	CDS	ACA1_187380	NW_004457396.1	47707	49930	D	encoded by transcript ACA1_187380A; uncharacterized protein	join(47707..48113,48276..48354,48456..48589,48686..48797,48884..48937,49160..49198,49351..49397,49478..49567,49646..49686,49872..49930)	Acanthamoeba castellanii str. Neff	14916510
ACA1_187390	CDS	ACA1_187390	NW_004457396.1	49988	51678	R	encoded by transcript ACA1_187390A; uncharacterized protein	complement(join(49988..50704,50801..51276,51366..51678))	Acanthamoeba castellanii str. Neff	14916511
ACA1_187400	CDS	ACA1_187400	NW_004457396.1	52480	54626	D	encoded by transcript ACA1_187400A; uncharacterized protein	join(52480..52526,52770..53107,53188..53261,53345..53479,53526..54626)	Acanthamoeba castellanii str. Neff	14916512
ACA1_187410	CDS	ACA1_187410	NW_004457396.1	55505	57070	R	encoded by transcript ACA1_187410A; uncharacterized protein	complement(join(55505..55748,55915..56179,56273..56381,56500..56853,56921..57070))	Acanthamoeba castellanii str. Neff	14916513
ACA1_187420	CDS	ACA1_187420	NW_004457396.1	57538	60745	D	encoded by transcript ACA1_187420A; protein kinase domain containing protein	join(57538..57926,57998..58153,58221..58292,58370..58476,58542..58665,58738..58815,58898..59076,59150..59201,59262..59305,59630..59733,59801..59900,59975..60150,60246..60434,60659..60745)	Acanthamoeba castellanii str. Neff	14916514
ACA1_187430	CDS	ACA1_187430	NW_004457396.1	61496	63421	R	encoded by transcript ACA1_187430A; zincbinding dehydrogenase family oxidoreductase	complement(join(61496..61535,61554..61633,61707..61770,61924..62002,62084..62279,62519..62641,62806..62866,63025..63141,63285..63421))	Acanthamoeba castellanii str. Neff	14916571
ACA1_187440	CDS	ACA1_187440	NW_004457396.1	63666	65477	D	encoded by transcript ACA1_187440A; ankyrin repeat domain containing protein	join(63666..63993,64126..64239,64302..64433,64672..64815,64911..65199,65303..65477)	Acanthamoeba castellanii str. Neff	14916572
ACA1_187460	CDS	ACA1_187460	NW_004457396.1	67722	71611	R	encoded by transcript ACA1_187460A; uncharacterized protein	complement(join(67722..67862,67997..68071,68151..68254,68327..68502,68604..68711,68804..68874,68958..69812,69901..69983,70071..70157,70205..70217,70380..70492,70563..70597,70687..70744,70829..70925,71006..71364,71539..71611))	Acanthamoeba castellanii str. Neff	14916574
ACA1_187470	CDS	ACA1_187470	NW_004457396.1	72790	73490	R	encoded by transcript ACA1_187470A; uncharacterized protein	complement(join(72790..72976,73064..73131,73235..73317,73371..73396,73456..73490))	Acanthamoeba castellanii str. Neff	14916575
ACA1_187480	CDS	ACA1_187480	NW_004457396.1	73837	74548	D	encoded by transcript ACA1_187480A; uncharacterized protein	join(73837..73908,74028..74166,74253..74337,74428..74548)	Acanthamoeba castellanii str. Neff	14916576
ACA1_187590	CDS	ACA1_187590	NW_004457396.1	74879	75475	D	encoded by transcript ACA1_187590A; tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)binding domain containing protein	join(74879..74892,74969..75039,75130..75240,75321..75475)	Acanthamoeba castellanii str. Neff	14916577
ACA1_187600	CDS	ACA1_187600	NW_004457396.1	75630	76436	R	encoded by transcript ACA1_187600A; uncharacterized protein	complement(join(75630..75799,75878..75957,76042..76220,76293..76436))	Acanthamoeba castellanii str. Neff	14916578
ACA1_187610	CDS	ACA1_187610	NW_004457396.1	77421	80330	D	encoded by transcript ACA1_187610A; uncharacterized protein	join(77421..77690,77801..77934,77997..78077,78177..78393,78570..78805,78930..79266,79342..79556,79646..79699,80144..80182,80309..80330)	Acanthamoeba castellanii str. Neff	14916579
ACA1_187720	CDS	ACA1_187720	NW_004457396.1	80916	82457	D	encoded by transcript ACA1_187720A; tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)binding domain containing protein	join(80916..81075,81182..81299,81373..81476,81576..81671,81777..81846,81923..81993,82085..82195,82303..82457)	Acanthamoeba castellanii str. Neff	14916580
ACA1_187730	CDS	ACA1_187730	NW_004457396.1	83061	85919	D	encoded by transcript ACA1_187730A; uncharacterized protein	join(83061..83330,83463..83596,83665..83745,83845..84064,84177..84412,84517..84853,84930..85144,85234..85357,85517..85640,85737..85775,85879..85919)	Acanthamoeba castellanii str. Neff	14916581
ACA1_187740	CDS	ACA1_187740	NW_004457396.1	86210	87727	R	encoded by transcript ACA1_187740A; uncharacterized protein	complement(join(86210..86400,86474..86625,86784..86952,87043..87201,87306..87434,87553..87727))	Acanthamoeba castellanii str. Neff	14916582
ACA1_187750	CDS	ACA1_187750	NW_004457396.1	88308	88901	D	encoded by transcript ACA1_187750A; chorismate mutase subfamily protein	88308..88901	Acanthamoeba castellanii str. Neff	14916583
ACA1_187760	CDS	ACA1_187760	NW_004457396.1	89153	90536	R	encoded by transcript ACA1_187760A; Carbohydrate binding domain CBM49 domain containing protein	complement(join(89153..90392,90511..90536))	Acanthamoeba castellanii str. Neff	14916557
ACA1_187770	CDS	ACA1_187770	NW_004457396.1	90999	92568	R	encoded by transcript ACA1_187770A; oxidoreductase NADbinding domain containing protein	complement(join(90999..91055,91143..91486,91565..91640,91736..91798,91903..91988,92061..92568))	Acanthamoeba castellanii str. Neff	14916558
ACA1_187780	CDS	ACA1_187780	NW_004457396.1	92756	94667	R	encoded by transcript ACA1_187780A; ATP:cob(I)alamin adenosyltransferase	complement(join(92756..93473,93675..93736,93813..93910,93989..94058,94123..94180,94278..94348,94429..94496,94643..94667))	Acanthamoeba castellanii str. Neff	14916559
ACA1_187890	CDS	ACA1_187890	NW_004457396.1	95023	95650	D	encoded by transcript ACA1_187890A; ubiquitinconjugating enzyme E2, putative	join(95023..95202,95317..95482,95553..95650)	Acanthamoeba castellanii str. Neff	14916560
ACA1_187900	CDS	ACA1_187900	NW_004457396.1	95847	98744	R	encoded by transcript ACA1_187900A; Fbox domain containing protein	complement(join(95847..95981,96053..96152,96236..96433,96528..97172,97330..97477,97570..97765,97872..97954,98041..98145,98500..98577,98624..>98744))	Acanthamoeba castellanii str. Neff	14916561
ACA1_188010	CDS	ACA1_188010	NW_004457396.1	100740	104315	D	encoded by transcript ACA1_188010A; importin 13, putative	join(<100740..100785,100856..101031,101120..101212,101299..101371,101454..101509,101657..101728,101814..101882,101944..102013,102083..102181,102255..102358,102464..102598,102869..103124,103217..103297,103392..103555,103653..103769,103893..104074,104228..104315)	Acanthamoeba castellanii str. Neff	14916562
ACA1_188020	CDS	ACA1_188020	NW_004457396.1	104457	106173	D	encoded by transcript ACA1_188020A; Omethyltransferase domain containing protein	join(104457..104487,104602..104669,104741..104869,104942..105063,105191..105419,105550..105720,105806..105923,106031..106173)	Acanthamoeba castellanii str. Neff	14916563
ACA1_188030	CDS	ACA1_188030	NW_004457396.1	106326	107772	R	encoded by transcript ACA1_188030A; uncharacterized protein	complement(join(106326..106482,106553..106688,106754..107147,107250..107323,107407..107617,107728..107772))	Acanthamoeba castellanii str. Neff	14916564
ACA1_188040	CDS	ACA1_188040	NW_004457396.1	107841	108167	R	encoded by transcript ACA1_188040A; uncharacterized protein	complement(join(107841..108075,108139..108167))	Acanthamoeba castellanii str. Neff	14916565
ACA1_188050	CDS	ACA1_188050	NW_004457396.1	108358	111325	R	encoded by transcript ACA1_188050A; isocitrate dehydrogenase, NADPdependent, putative	complement(join(108358..108363,108554..108638,108734..108807,108940..109040,109240..109391,109476..109612,109696..109963,110074..110198,110410..110502,111006..111111,111258..111325))	Acanthamoeba castellanii str. Neff	14916566
ACA1_188160	CDS	ACA1_188160	NW_004457396.1	111607	114774	R	encoded by transcript ACA1_188160A; IBR domain containing protein	complement(join(111607..111654,111770..111840,111907..111974,112065..112122,112212..112302,112395..112514,112589..112687,112784..112858,112936..113038,113123..113197,113272..113664,113751..113866,113971..114118,114218..114315,114380..114496,114625..114774))	Acanthamoeba castellanii str. Neff	14916567
ACA1_188170	CDS	ACA1_188170	NW_004457396.1	114911	120362	D	encoded by transcript ACA1_188170A; leucine-tRNA ligase	join(114911..114946,115224..115334,115416..115527,115682..115747,115845..115939,116020..116160,116287..116379,116488..116619,116701..116814,117147..117237,117330..117424,117493..117594,117675..117877,117971..118141,118268..118366,118441..118633,118708..118848,118981..119050,119152..119274,119418..119488,119567..119642,119744..119820,119962..120087,120189..120362)	Acanthamoeba castellanii str. Neff	14916568
ACA1_188180	CDS	ACA1_188180	NW_004457396.1	121017	122685	R	encoded by transcript ACA1_188180A; Inosine-uridine preferring nucleoside hydrolase superfamily protein	complement(join(121017..121324,121413..121730,121878..121948,122059..122158,122240..122357,122405..122467,122635..122685))	Acanthamoeba castellanii str. Neff	14916569
ACA1_188190	CDS	ACA1_188190	NW_004457396.1	123063	123847	R	encoded by transcript ACA1_188190A; basic calponin isoform 4, putative	complement(join(123063..123121,123220..123374,123454..123531,123641..123733,123801..123847))	Acanthamoeba castellanii str. Neff	14916539
ACA1_188200	CDS	ACA1_188200	NW_004457396.1	124197	125870	R	encoded by transcript ACA1_188200A; SCPlike extracellular subfamily protein	complement(join(124197..124690,124942..125118,125187..125339,125450..125608,125675..125870))	Acanthamoeba castellanii str. Neff	14916540
ACA1_188210	CDS	ACA1_188210	NW_004457396.1	126099	126975	R	encoded by transcript ACA1_188210A; charged multivesicular body protein 2a, putative	complement(join(126099..126194,126281..126380,126461..126641,126741..126975))	Acanthamoeba castellanii str. Neff	14916541
ACA1_188220	CDS	ACA1_188220	NW_004457396.1	127110	128378	D	encoded by transcript ACA1_188220A; uncharacterized protein	join(127110..127226,127313..127507,127580..127690,127798..127969,128047..128170,128246..128378)	Acanthamoeba castellanii str. Neff	14916542
ACA1_188230	CDS	ACA1_188230	NW_004457396.1	128468	130382	R	encoded by transcript ACA1_188230A; tRNA intron endonuclease, catalytic Cterminal subfamily protein	complement(join(128468..128593,128673..128870,128971..129078,129163..129682,129774..129867,129959..130382))	Acanthamoeba castellanii str. Neff	14916543
ACA1_188240	CDS	ACA1_188240	NW_004457396.1	130542	132237	D	encoded by transcript ACA1_188240A; metaxin 1, putative	join(130542..130646,130718..130753,130931..130987,131078..131173,131257..131339,131448..131523,131628..131704,131788..131884,131970..132053,132121..132237)	Acanthamoeba castellanii str. Neff	14916544
ACA1_188250	CDS	ACA1_188250	NW_004457396.1	133023	136138	D	encoded by transcript ACA1_188250A; GATA zinc finger domain containing protein	join(133023..134834,135048..135137,135264..135370,135475..136138)	Acanthamoeba castellanii str. Neff	14916545
ACA1_188260	CDS	ACA1_188260	NW_004457396.1	136513	138537	D	encoded by transcript ACA1_188260A; adenosylmethionine decarboxylase	join(136513..136784,136955..137054,137206..137332,137428..137503,137603..137714,137859..138127,138297..138421,138515..138537)	Acanthamoeba castellanii str. Neff	14916546
ACA1_188270	CDS	ACA1_188270	NW_004457396.1	138754	140458	R	encoded by transcript ACA1_188270A; transmembrane protein 66, putative	complement(join(138754..138779,138892..139054,139148..139358,139444..139548,139646..139762,139905..139938,140023..140095,140171..140281,140396..140458))	Acanthamoeba castellanii str. Neff	14916547
ACA1_188280	CDS	ACA1_188280	NW_004457396.1	140572	144073	R	encoded by transcript ACA1_188280A; ABC transporter, ATPbinding domain containing protein	complement(join(140572..140688,140840..140910,140990..141090,141167..141267,141335..141466,141591..141662,141759..141833,141928..141990,142067..142138,142233..142314,142376..142461,142540..142606,142678..142736,142817..142928,143008..143082,143150..143253,143477..143633,143750..143913,144044..144073))	Acanthamoeba castellanii str. Neff	14916548
ACA1_188290	CDS	ACA1_188290	NW_004457396.1	144484	147136	D	encoded by transcript ACA1_188290A; IPT/TIG domain containing protein	join(144484..144855,144957..145518,145588..145665,145830..145960,146036..146175,146240..146346,146716..146825,146902..146999,147079..147136)	Acanthamoeba castellanii str. Neff	14916549
ACA1_188310	CDS	ACA1_188310	NW_004457396.1	150297	154512	R	encoded by transcript ACA1_188310A; uncharacterized protein	complement(join(150297..150365,150433..150606,150678..150844,150963..151099,151191..151303,151456..151607,151707..151827,151962..152033,152139..152528,152658..152725,152842..153298,153399..153486,153588..153661,153765..153944,154084..154203,154288..154512))	Acanthamoeba castellanii str. Neff	14916551
ACA1_188320	CDS	ACA1_188320	NW_004457396.1	155810	156994	R	encoded by transcript ACA1_188320A; AcylCoA-binding domain containing protein	complement(join(155810..155959,156022..156092,156160..156308,156414..156529,156621..156720,156870..156994))	Acanthamoeba castellanii str. Neff	14916552
ACA1_188330	CDS	ACA1_188330	NW_004457396.1	157232	159884	D	encoded by transcript ACA1_188330A; calcium binding egf domain containing protein	join(157232..158717,158784..159748,159852..159884)	Acanthamoeba castellanii str. Neff	14916553
ACA1_188340	CDS	ACA1_188340	NW_004457396.1	160313	161282	D	encoded by transcript ACA1_188340A; Glycolipid transfer protein (GLTP), putative	join(160313..160354,160506..160712,160905..161282)	Acanthamoeba castellanii str. Neff	14916554
ACA1_188350	CDS	ACA1_188350	NW_004457396.1	162047	163783	D	encoded by transcript ACA1_188350A; IgA-specific serine endopeptidase	join(162047..162264,162409..163783)	Acanthamoeba castellanii str. Neff	14916555
ACA1_188360	CDS	ACA1_188360	NW_004457396.1	164168	164761	R	encoded by transcript ACA1_188360A; chorismate mutase subfamily protein	complement(164168..164761)	Acanthamoeba castellanii str. Neff	14916556
ACA1_188370	CDS	ACA1_188370	NW_004457396.1	165587	167578	D	encoded by transcript ACA1_188370A; uncharacterized protein	join(165587..165864,165953..166201,166218..166478,166568..166814,166826..167578)	Acanthamoeba castellanii str. Neff	14916515
ACA1_188380	CDS	ACA1_188380	NW_004457396.1	168214	169716	R	encoded by transcript ACA1_188380A; Fbox domain containing protein	complement(join(168214..168440,168534..168626,168699..168783,168887..169015,169091..169215,169362..169716))	Acanthamoeba castellanii str. Neff	14916516
ACA1_188490	CDS	ACA1_188490	NW_004457396.1	170947	172333	R	encoded by transcript ACA1_188490A; COP9 signalosome complex subunit 3 (Signalosome subunit 3), putative	complement(join(170947..171135,171224..171466,171544..171852,172039..172090,172155..172333))	Acanthamoeba castellanii str. Neff	14916517
ACA1_188500	CDS	ACA1_188500	NW_004457396.1	172588	174631	D	encoded by transcript ACA1_188500A; CRAL/TRIO domain containing protein	join(172588..172641,172711..172945,173026..173095,173202..173276,173369..173528,173799..173840,173946..174090,174181..174299,174376..174522,174590..174631)	Acanthamoeba castellanii str. Neff	14916518
ACA1_188510	CDS	ACA1_188510	NW_004457396.1	175172	180217	D	encoded by transcript ACA1_188510A; PH domain containing protein	join(175172..175180,175265..175351,175446..175566,175654..175769,175850..175910,175982..176232,176323..176485,176564..176709,176771..176890,177010..177121,177187..177282,177357..177433,177518..177600,177677..177755,177832..177960,178038..178095,178178..178422,178507..178645,178724..178834,178921..179058,179270..179737,179767..179933,180032..180217)	Acanthamoeba castellanii str. Neff	14916519
ACA1_188520	CDS	ACA1_188520	NW_004457396.1	180479	180592	R	encoded by transcript ACA1_188520A; uncharacterized protein	complement(180479..180592)	Acanthamoeba castellanii str. Neff	14916520
ACA1_188530	CDS	ACA1_188530	NW_004457396.1	180826	181838	R	encoded by transcript ACA1_188530A; uncharacterized protein	complement(join(180826..181001,181038..181193,181270..181507,181590..181838))	Acanthamoeba castellanii str. Neff	14916521
ACA1_188540	CDS	ACA1_188540	NW_004457396.1	182046	184055	R	encoded by transcript ACA1_188540A; uncharacterized protein	complement(join(182046..182212,182264..182426,182511..182615,182727..183158,183204..183245,183378..183455,183600..184055))	Acanthamoeba castellanii str. Neff	14916522
ACA1_188550	CDS	ACA1_188550	NW_004457396.1	185009	186345	R	encoded by transcript ACA1_188550A; IgA-specific serine endopeptidase	complement(join(185009..186059,186131..186345))	Acanthamoeba castellanii str. Neff	14916523
ACA1_188560	CDS	ACA1_188560	NW_004457396.1	187002	187280	D	encoded by transcript ACA1_188560A; uncharacterized protein	187002..187280	Acanthamoeba castellanii str. Neff	14916524
ACA1_188570	CDS	ACA1_188570	NW_004457396.1	187526	189054	D	encoded by transcript ACA1_188570A; golgi family protein, putative	join(187526..187530,187598..187686,187770..187922,187984..188094,188187..188281,188329..188488,188576..188651,188730..188785,188879..189054)	Acanthamoeba castellanii str. Neff	14916525
ACA1_188580	CDS	ACA1_188580	NW_004457396.1	189284	190379	R	encoded by transcript ACA1_188580A; DNA repair and recombination protein RAD52, putative	complement(join(189284..189360,189429..189629,189703..190021,190055..190204,190290..190379))	Acanthamoeba castellanii str. Neff	14916526
ACA1_188690	CDS	ACA1_188690	NW_004457396.1	191741	192709	R	encoded by transcript ACA1_188690A; phytanoylCoA dioxygenase domain containing 1 (predicted), putative	complement(join(191741..192064,192141..192275,192288..192460,192538..192709))	Acanthamoeba castellanii str. Neff	14916527
ACA1_188700	CDS	ACA1_188700	NW_004457396.1	193162	194053	D	encoded by transcript ACA1_188700A; AT hook motif domain containing protein	join(193162..193283,193585..193721,193794..193857,193924..194053)	Acanthamoeba castellanii str. Neff	14916528
ACA1_188710	CDS	ACA1_188710	NW_004457396.1	195074	196756	D	encoded by transcript ACA1_188710A; SNARE associated Golgi protein	join(195074..195509,195762..195856,195966..196038,196106..196183,196266..196756)	Acanthamoeba castellanii str. Neff	14916529
ACA1_188720	CDS	ACA1_188720	NW_004457396.1	197727	198556	D	encoded by transcript ACA1_188720A; Mphase phosphoprotein 6, putative	join(197727..197780,197856..197974,198056..198137,198203..198309,198406..198556)	Acanthamoeba castellanii str. Neff	14916530
ACA1_188730	CDS	ACA1_188730	NW_004457396.1	199261	202055	D	encoded by transcript ACA1_188730A; erythromycin esterase	join(199261..199366,199416..199518,199605..199694,199761..199841,200026..200097,200208..200315,200380..200528,200655..200873,200999..201081,201153..201241,201325..201413,201507..201637,201798..201839,201939..202055)	Acanthamoeba castellanii str. Neff	14916531
ACA1_188740	CDS	ACA1_188740	NW_004457396.1	202724	207951	R	encoded by transcript ACA1_188740A; communication mutant protein f, putative	complement(join(202724..203281,203377..203673,203749..203897,203982..204333,204429..204496,204583..204665,204703..205013,205038..205121,205214..205482,205542..205889,205961..206065,206144..206342,206411..206676,206763..206957,206997..207117,207201..207358,207473..207655,207900..207951))	Acanthamoeba castellanii str. Neff	14916532
ACA1_188750	CDS	ACA1_188750	NW_004457396.1	208820	211058	D	encoded by transcript ACA1_188750A; diphthamide biosynthesis protein 1, putative	join(208820..208855,209001..209109,209247..209332,209435..209568,209676..209797,209890..210008,210135..210259,210363..210588,210668..210768,210881..211058)	Acanthamoeba castellanii str. Neff	14916533
ACA1_188760	CDS	ACA1_188760	NW_004457396.1	211095	214012	R	encoded by transcript ACA1_188760A; uncharacterized protein	complement(join(211095..211232,211354..212126,212195..212850,212900..213074,213146..213564,213661..213778,213901..214012))	Acanthamoeba castellanii str. Neff	14916534
ACA1_188870	CDS	ACA1_188870	NW_004457396.1	216031	217536	R	encoded by transcript ACA1_188870A; Bystin, putative	complement(join(<216031..216302,216391..216508,216612..216832,217135..217241,217310..217367,217446..217536))	Acanthamoeba castellanii str. Neff	14916535
ACA1_188980	CDS	ACA1_188980	NW_004457396.1	218859	220712	D	encoded by transcript ACA1_188980A; Hypothetical protein	join(218859..219025,219109..219172,219283..219353,219698..219792,219869..219977,220029..220245,220323..220435,220526..220712)	Acanthamoeba castellanii str. Neff	14916536
ACA1_189090	CDS	ACA1_189090	NW_004457396.1	221033	224401	D	encoded by transcript ACA1_189090A; nucleoporin, putative	join(221033..221075,221115..221221,221294..221392,221503..221685,221787..221930,222002..222150,222218..222277,222445..222508,222582..222724,222820..222999,223172..223220,223292..223485,223558..223735,223802..223949,224010..224167,224240..>224401)	Acanthamoeba castellanii str. Neff	14916537
ACA1_189200	CDS	ACA1_189200	NW_004457396.1	225034	226218	D	encoded by transcript ACA1_189200A; nucleoporin protein	join(<225034..225161,225236..225386,225448..225644,225715..225980,226052..>226218)	Acanthamoeba castellanii str. Neff	14916538
ACA1_007910	CDS	ACA1_007910	NW_004457395.1	165	989	R	encoded by transcript ACA1_007910A; uncharacterized protein	complement(165..989)	Acanthamoeba castellanii str. Neff	14916499
ACA1_078180	CDS	ACA1_078180	NW_004457394.1	1667	4013	R	encoded by transcript ACA1_078180A; SWIM zinc finger domain containing protein	complement(join(1667..1798,1826..2778,2849..4013))	Acanthamoeba castellanii str. Neff	14916478
ACA1_078190	CDS	ACA1_078190	NW_004457394.1	4200	4895	R	encoded by transcript ACA1_078190A; uncharacterized protein	complement(join(4200..4302,4456..4895))	Acanthamoeba castellanii str. Neff	14916486
ACA1_078200	CDS	ACA1_078200	NW_004457394.1	5168	6861	D	encoded by transcript ACA1_078200A; uracil phosporibosyltransferase	join(5168..5399,5545..5641,5749..5870,5995..6071,6208..6287,6359..6451,6548..6617,6705..6735,6833..6861)	Acanthamoeba castellanii str. Neff	14916495
ACA1_078210	CDS	ACA1_078210	NW_004457394.1	7139	7456	D	encoded by transcript ACA1_078210A; uncharacterized protein	7139..7456	Acanthamoeba castellanii str. Neff	14916496
ACA1_078220	CDS	ACA1_078220	NW_004457394.1	7702	8793	R	encoded by transcript ACA1_078220A; uncharacterized protein	complement(join(7702..7801,8035..8120,8223..8378,8491..8598,8722..>8793))	Acanthamoeba castellanii str. Neff	14916497
ACA1_078330	CDS	ACA1_078330	NW_004457394.1	13269	13427	D	encoded by transcript ACA1_078330A; uncharacterized protein	13269..13427	Acanthamoeba castellanii str. Neff	14916498
ACA1_078340	CDS	ACA1_078340	NW_004457394.1	15192	15866	D	encoded by transcript ACA1_078340A; uncharacterized protein	join(15192..15449,15657..15866)	Acanthamoeba castellanii str. Neff	14916487
ACA1_078450	CDS	ACA1_078450	NW_004457394.1	19417	21283	R	encoded by transcript ACA1_078450A; carboxylesterase superfamily protein	complement(join(19417..20674,20765..20859,20999..21083,21159..21283))	Acanthamoeba castellanii str. Neff	14916488
ACA1_078460	CDS	ACA1_078460	NW_004457394.1	21888	27327	D	encoded by transcript ACA1_078460A; serine/threonine kinase	join(21888..23273,23354..24470,24553..24677,24761..24919,25008..26992,27093..27327)	Acanthamoeba castellanii str. Neff	14916489
ACA1_078470	CDS	ACA1_078470	NW_004457394.1	27469	31359	R	encoded by transcript ACA1_078470A; serine/threonineprotein kinase	complement(join(27469..27631,27747..27831,27924..28037,28157..28262,28340..28447,28591..28893,29012..29313,29437..29565,29712..29829,29912..29991,30068..30206,30315..30424,30520..30958,31114..31359))	Acanthamoeba castellanii str. Neff	14916490
ACA1_078480	CDS	ACA1_078480	NW_004457394.1	31685	32837	R	encoded by transcript ACA1_078480A; uncharacterized protein	complement(join(31685..31763,31892..31993,32106..32354,32432..32782,32809..32837))	Acanthamoeba castellanii str. Neff	14916491
ACA1_078490	CDS	ACA1_078490	NW_004457394.1	33317	34641	R	encoded by transcript ACA1_078490A; uncharacterized protein	complement(join(33317..33343,33366..33435,33533..33648,33766..33873,33995..34137,34210..34308,34383..34641))	Acanthamoeba castellanii str. Neff	14916492
ACA1_078500	CDS	ACA1_078500	NW_004457394.1	34709	36289	D	encoded by transcript ACA1_078500A; uracil phosphoribosyltransferase	join(34709..34817,34971..35067,35161..35267,35415..35488,35642..35732,35801..35881,36002..36069,36236..36289)	Acanthamoeba castellanii str. Neff	14916493
ACA1_078520	CDS	ACA1_078520	NW_004457394.1	37576	38751	D	encoded by transcript ACA1_078520A; START domain containing protein	join(37576..37974,38138..38302,38424..38528,38632..38751)	Acanthamoeba castellanii str. Neff	14916479
ACA1_078530	CDS	ACA1_078530	NW_004457394.1	38846	40003	D	encoded by transcript ACA1_078530A; uncharacterized protein	join(38846..39057,39143..39200,39266..39430,39583..39684,39890..40003)	Acanthamoeba castellanii str. Neff	14916480
ACA1_078540	CDS	ACA1_078540	NW_004457394.1	40365	43931	D	encoded by transcript ACA1_078540A; Sadenosyl-methyltransferase MraW	join(40365..40506,40594..40707,40811..40957,41058..41158,41326..41553,41713..42057,42318..43931)	Acanthamoeba castellanii str. Neff	14916481
ACA1_078560	CDS	ACA1_078560	NW_004457394.1	45959	49723	R	encoded by transcript ACA1_078560A; Sec1like family protein	complement(join(45959..46056,46140..46241,46360..46445,46589..46723,46848..46879,47041..47127,47289..47362,47501..47597,47715..47783,47857..47944,48043..48171,48309..48454,48539..48643,48764..48887,48976..49086,49214..49377,49529..49723))	Acanthamoeba castellanii str. Neff	14916483
ACA1_078570	CDS	ACA1_078570	NW_004457394.1	49836	52223	D	encoded by transcript ACA1_078570A; methyltransferase domain containing protein	join(49836..49928,50018..50123,50206..50298,50394..50463,50557..50665,50810..50944,51020..51090,51209..51260,51340..51443,51542..51710,51814..51902,52007..52223)	Acanthamoeba castellanii str. Neff	14916484
ACA1_078580	CDS	ACA1_078580	NW_004457394.1	52220	55457	R	encoded by transcript ACA1_078580A; uncharacterized protein	complement(join(52220..52335,52426..52577,52674..52806,53109..53282,53402..53597,53718..53789,53857..53935,54004..54058,54204..54375,54463..54606,54684..54921,55019..55067,55173..55285,55363..55457))	Acanthamoeba castellanii str. Neff	14916485
ACA1_078590	CDS	ACA1_078590	NW_004457394.1	55576	56333	R	encoded by transcript ACA1_078590A; RasG, putative	complement(join(55576..55735,55821..55893,55979..56015,56092..56202,56292..56333))	Acanthamoeba castellanii str. Neff	14916430
ACA1_078600	CDS	ACA1_078600	NW_004457394.1	57029	64782	R	encoded by transcript ACA1_078600A; phosphoinositide 3kinase family, accessory domain (pik domain) domain containing protein	complement(join(57029..57214,57284..57427,57534..57624,57764..57809,57899..57955,58055..58165,58262..58343,58545..58725,58819..58974,59063..59142,59218..59325,59455..59499,59747..59937,60066..60233,60347..60503,60661..60921,61014..61082,61173..61263,61543..61851,61946..62016,62123..62326,62420..62551,62700..62889,62971..63043,63129..63183,63509..63810,64319..64472,64609..64677,64738..64782))	Acanthamoeba castellanii str. Neff	14916431
ACA1_078610	CDS	ACA1_078610	NW_004457394.1	64952	67801	D	encoded by transcript ACA1_078610A; uncharacterized protein	join(64952..65773,65879..67189,67305..67456,67522..67801)	Acanthamoeba castellanii str. Neff	14916432
ACA1_078620	CDS	ACA1_078620	NW_004457394.1	68304	69994	D	encoded by transcript ACA1_078620A; carrier superfamily protein	join(68304..68471,68655..68754,68840..68949,69042..69195,69346..69485,69577..69784,69864..69994)	Acanthamoeba castellanii str. Neff	14916433
ACA1_078630	CDS	ACA1_078630	NW_004457394.1	70258	70908	D	encoded by transcript ACA1_078630A; uncharacterized protein	join(70258..70743,70801..70908)	Acanthamoeba castellanii str. Neff	14916434
ACA1_078640	CDS	ACA1_078640	NW_004457394.1	70963	73047	D	encoded by transcript ACA1_078640A; Bbox zinc finger domain containing protein	join(70963..72361,72506..72649,72730..72890,72958..73047)	Acanthamoeba castellanii str. Neff	14916435
ACA1_078650	CDS	ACA1_078650	NW_004457394.1	73137	74293	R	encoded by transcript ACA1_078650A; uncharacterized protein	complement(join(73137..73411,73543..73714,73896..73962,73974..74293))	Acanthamoeba castellanii str. Neff	14916436
ACA1_078760	CDS	ACA1_078760	NW_004457394.1	75609	76335	R	encoded by transcript ACA1_078760A; zinc finger, C3HC4 type (RING finger) domain containing protein	complement(join(75609..75632,75807..76104,76238..76335))	Acanthamoeba castellanii str. Neff	14916437
ACA1_078870	CDS	ACA1_078870	NW_004457394.1	76460	77967	R	encoded by transcript ACA1_078870A; mannoseP-dolichol utilization defect 1 protein	complement(join(76460..76623,76708..76810,76908..77054,77142..77197,77318..77400,77556..77709,77813..77878,77958..77967))	Acanthamoeba castellanii str. Neff	14916438
ACA1_078890	CDS	ACA1_078890	NW_004457394.1	85237	90502	D	encoded by transcript ACA1_078890A; histidine kinase	join(85237..85470,85613..85714,86007..86422,86507..86583,86677..86827,87024..87247,87408..87520,87623..89753,89883..90502)	Acanthamoeba castellanii str. Neff	14916466
ACA1_078910	CDS	ACA1_078910	NW_004457394.1	92765	94987	R	encoded by transcript ACA1_078910A; uncharacterized protein	complement(join(92765..94405,94484..94605,94729..94987))	Acanthamoeba castellanii str. Neff	14916468
ACA1_078920	CDS	ACA1_078920	NW_004457394.1	95282	96440	D	encoded by transcript ACA1_078920A; uncharacterized protein	join(95282..95383,95715..96440)	Acanthamoeba castellanii str. Neff	14916469
ACA1_078930	CDS	ACA1_078930	NW_004457394.1	97748	101370	R	encoded by transcript ACA1_078930A; RNA recognition motif domain containing protein	complement(join(97748..97902,98061..98158,98312..98458,98551..99871,99893..99947,99962..100091,100190..100329,100479..100630,100711..100820,100952..101036,101100..101370))	Acanthamoeba castellanii str. Neff	14916470
ACA1_078940	CDS	ACA1_078940	NW_004457394.1	105417	106314	R	encoded by transcript ACA1_078940A; uncharacterized protein	complement(join(105417..105584,105740..105860,106241..106314))	Acanthamoeba castellanii str. Neff	14916471
ACA1_078950	CDS	ACA1_078950	NW_004457394.1	106862	112997	R	encoded by transcript ACA1_078950A; fattyacid-CoA ligase	complement(join(106862..107453,107547..107681,107792..108005,108079..108184,108308..108418,108543..108925,109010..109444,109595..109671,109765..109818,109910..110038,110126..110238,110320..110401,110532..110923,111062..111174,111428..111602,111676..111794,111956..112100,112202..112362,112655..112997))	Acanthamoeba castellanii str. Neff	14916472
ACA1_078960	CDS	ACA1_078960	NW_004457394.1	113160	114153	D	encoded by transcript ACA1_078960A; Longinlike, putative	join(113160..113214,113333..113456,113558..113640,113710..113843,113947..114153)	Acanthamoeba castellanii str. Neff	14916473
ACA1_078970	CDS	ACA1_078970	NW_004457394.1	114282	117231	R	encoded by transcript ACA1_078970A; uncharacterized protein	complement(join(114282..116205,116328..116423,116495..116554,116636..116733,116865..116933,117046..117147,117211..117231))	Acanthamoeba castellanii str. Neff	14916474
ACA1_078980	CDS	ACA1_078980	NW_004457394.1	117965	120314	R	encoded by transcript ACA1_078980A; uncharacterized protein	complement(join(117965..118189,118297..118592,118774..119051,119145..119370,120021..120054,120201..120314))	Acanthamoeba castellanii str. Neff	14916475
ACA1_078990	CDS	ACA1_078990	NW_004457394.1	122558	126453	R	encoded by transcript ACA1_078990A; acylCoA synthetase, putative	complement(join(122558..122611,122680..122865,122955..123102,123191..123319,123404..123498,123576..123723,123818..123952,124045..124127,124232..124321,124418..124533,124615..124678,124829..124918,125007..125138,125242..125424,125540..125681,125772..125843,125974..126052,126124..126197,126431..126453))	Acanthamoeba castellanii str. Neff	14916476
ACA1_079000	CDS	ACA1_079000	NW_004457394.1	127876	129079	R	encoded by transcript ACA1_079000A; GATA zinc finger domain containing protein	complement(join(127876..128512,128580..129079))	Acanthamoeba castellanii str. Neff	14916477
ACA1_079010	CDS	ACA1_079010	NW_004457394.1	131174	132828	R	encoded by transcript ACA1_079010A; Glycoprotein, synaptic 2 family protein	complement(join(131174..131301,131418..131592,131704..131848,131939..132010,132106..132212,132335..132357,132438..132530,132594..132641,132723..132828))	Acanthamoeba castellanii str. Neff	14916440
ACA1_079020	CDS	ACA1_079020	NW_004457394.1	133204	137629	D	encoded by transcript ACA1_079020A; phosphatidylinositol glycan, class N, putative	join(133204..133375,133496..133601,133700..133797,133877..133946,134038..134123,134219..134304,134377..134459,134544..134667,134776..134961,135036..135242,135323..135568,135639..135735,135802..135932,136003..136181,136269..136452,136568..136676,136758..136860,136937..137090,137198..137629)	Acanthamoeba castellanii str. Neff	14916441
ACA1_079030	CDS	ACA1_079030	NW_004457394.1	137799	139184	D	encoded by transcript ACA1_079030A; acetyltransferase	join(137799..138025,138175..138307,138413..138512,138644..138759,138855..139184)	Acanthamoeba castellanii str. Neff	14916442
ACA1_079040	CDS	ACA1_079040	NW_004457394.1	139584	140174	R	encoded by transcript ACA1_079040A; uncharacterized protein	complement(join(139584..139699,139745..140174))	Acanthamoeba castellanii str. Neff	14916443
ACA1_079150	CDS	ACA1_079150	NW_004457394.1	143290	144764	R	encoded by transcript ACA1_079150A; HMG (high mobility group) box domain containing protein	complement(join(143290..143881,143968..144444,144616..144764))	Acanthamoeba castellanii str. Neff	14916444
ACA1_079160	CDS	ACA1_079160	NW_004457394.1	144824	145576	R	encoded by transcript ACA1_079160A; hint module protein	complement(join(144824..145120,145136..145576))	Acanthamoeba castellanii str. Neff	14916445
ACA1_079170	CDS	ACA1_079170	NW_004457394.1	145776	147173	R	encoded by transcript ACA1_079170A; uncharacterized protein	complement(join(145776..146750,146856..147173))	Acanthamoeba castellanii str. Neff	14916446
ACA1_079180	CDS	ACA1_079180	NW_004457394.1	148095	148366	D	encoded by transcript ACA1_079180A; uncharacterized protein	join(148095..148188,148203..148366)	Acanthamoeba castellanii str. Neff	14916447
ACA1_079190	CDS	ACA1_079190	NW_004457394.1	148551	149304	D	encoded by transcript ACA1_079190A; uncharacterized protein	join(148551..148976,148996..149304)	Acanthamoeba castellanii str. Neff	14916448
ACA1_079200	CDS	ACA1_079200	NW_004457394.1	149404	151204	D	encoded by transcript ACA1_079200A; chondroitin AC lyase	join(149404..149802,149960..151204)	Acanthamoeba castellanii str. Neff	14916449
ACA1_079220	CDS	ACA1_079220	NW_004457394.1	151658	152287	D	encoded by transcript ACA1_079220A; uncharacterized protein	151658..152287	Acanthamoeba castellanii str. Neff	14916451
ACA1_079250	CDS	ACA1_079250	NW_004457394.1	154739	155033	D	encoded by transcript ACA1_079250A; uncharacterized protein	join(154739..154958,154972..155033)	Acanthamoeba castellanii str. Neff	14916454
ACA1_079270	CDS	ACA1_079270	NW_004457394.1	155677	156168	D	encoded by transcript ACA1_079270A; linker histone H1 and H5 domain containing protein	155677..156168	Acanthamoeba castellanii str. Neff	14916456
ACA1_079280	CDS	ACA1_079280	NW_004457394.1	156146	156619	R	encoded by transcript ACA1_079280A; protein kinase	complement(join(156146..156296,156334..156557,156590..156619))	Acanthamoeba castellanii str. Neff	14916457
ACA1_079290	CDS	ACA1_079290	NW_004457394.1	156728	157122	R	encoded by transcript ACA1_079290A; uncharacterized protein	complement(join(156728..156943,156994..157122))	Acanthamoeba castellanii str. Neff	14916458
ACA1_079300	CDS	ACA1_079300	NW_004457394.1	157175	158020	R	encoded by transcript ACA1_079300A; uncharacterized protein	complement(157175..158020)	Acanthamoeba castellanii str. Neff	14916459
ACA1_079320	CDS	ACA1_079320	NW_004457394.1	159561	159877	R	encoded by transcript ACA1_079320A; NADPH:quinone reductase	complement(join(159561..159734,159788..159877))	Acanthamoeba castellanii str. Neff	14916461
ACA1_079330	CDS	ACA1_079330	NW_004457394.1	160262	161526	D	encoded by transcript ACA1_079330A; NAD dependent epimerase/dehydratase family protein	join(160262..160305,160432..160511,160656..160762,160828..161386,161504..161526)	Acanthamoeba castellanii str. Neff	14916462
ACA1_079340	CDS	ACA1_079340	NW_004457394.1	162030	163137	R	encoded by transcript ACA1_079340A; iridovirus major capsid protein	complement(join(162030..162041,162248..163015,163027..163137))	Acanthamoeba castellanii str. Neff	14916463
ACA1_079450	CDS	ACA1_079450	NW_004457394.1	164492	164962	D	encoded by transcript ACA1_079450A; uncharacterized protein	join(164492..164594,164670..164808,164878..164962)	Acanthamoeba castellanii str. Neff	14916464
ACA1_079460	CDS	ACA1_079460	NW_004457394.1	166661	167131	D	encoded by transcript ACA1_079460A; uncharacterized protein	join(166661..166760,166854..167131)	Acanthamoeba castellanii str. Neff	14916465
ACA1_005320	CDS	ACA1_005320	NW_004457393.1	949	4498	D	encoded by transcript ACA1_005320A; DEAD/DEAH box helicase	join(949..984,1186..1356,1445..1579,1696..1778,1895..1952,2009..2093,2165..2274,2528..2633,2705..2778,2878..2957,3034..3128,3205..3276,3342..3403,3484..3613,3686..3795,3908..3982,4054..4098,4204..4272,4376..4498)	Acanthamoeba castellanii str. Neff	14916428
ACA1_005430	CDS	ACA1_005430	NW_004457393.1	6968	7896	D	encoded by transcript ACA1_005430A; Protein kinase	join(6968..7683,7800..7896)	Acanthamoeba castellanii str. Neff	14916429
ACA1_311340	CDS	ACA1_311340	NW_004457392.1	15	2020	R	encoded by transcript ACA1_311340A; uncharacterized protein	complement(join(<15..152,234..352,457..517,969..1043,1157..1277,1348..1415,1796..1876,1907..2020))	Acanthamoeba castellanii str. Neff	14916427
ACA1_311650	CDS	ACA1_311650	NW_004457392.1	2791	3146	R	encoded by transcript ACA1_311650A; uncharacterized protein	complement(join(2791..2918,2993..3146))	Acanthamoeba castellanii str. Neff	14916423
ACA1_311760	CDS	ACA1_311760	NW_004457392.1	4237	7706	R	encoded by transcript ACA1_311760A; Beige/BEACH domain containing protein	complement(join(<4237..4264,4342..4536,4606..5131,5617..5778,5849..5936,6011..6156,6250..6310,6376..6509,6539..6618,6690..6795,7096..7206,7286..7444,7465..7585,7665..7706))	Acanthamoeba castellanii str. Neff	14916424
ACA1_311970	CDS	ACA1_311970	NW_004457392.1	8332	9068	D	encoded by transcript ACA1_311970A; DR1associated protein 1 (negative cofactor 2 alpha), putative	join(8332..8379,8444..8513,8602..8681,8769..8829,8914..9068)	Acanthamoeba castellanii str. Neff	14916426
ACA1_312180	CDS	ACA1_312180	NW_004457392.1	13280	14760	R	encoded by transcript ACA1_312180A; glycosyl hydrolase family 3, C-terminal domain containing protein	complement(join(13280..13456,13991..14136,14241..14304,14420..14569,14656..>14760))	Acanthamoeba castellanii str. Neff	14916425
ACA1_377210	CDS	ACA1_377210	NW_004457391.1	567	2362	R	encoded by transcript ACA1_377210A; cyclin, Nterminal domain containing protein	complement(join(567..752,837..989,1082..2362))	Acanthamoeba castellanii str. Neff	14916376
ACA1_377220	CDS	ACA1_377220	NW_004457391.1	4513	4929	R	encoded by transcript ACA1_377220A; uncharacterized protein	complement(join(4513..4631,4803..4929))	Acanthamoeba castellanii str. Neff	14916314
ACA1_377230	CDS	ACA1_377230	NW_004457391.1	8311	9903	D	encoded by transcript ACA1_377230A; uncharacterized protein	join(8311..8409,8559..9093,9160..9547,9659..9743,9880..9903)	Acanthamoeba castellanii str. Neff	14916319
ACA1_377240	CDS	ACA1_377240	NW_004457391.1	11288	11757	R	encoded by transcript ACA1_377240A; uncharacterized protein	complement(join(11288..11382,11451..11616,11683..11757))	Acanthamoeba castellanii str. Neff	14916320
ACA1_377250	CDS	ACA1_377250	NW_004457391.1	11858	12133	R	encoded by transcript ACA1_377250A; uncharacterized protein	complement(11858..12133)	Acanthamoeba castellanii str. Neff	14916315
ACA1_377260	CDS	ACA1_377260	NW_004457391.1	13432	17503	D	encoded by transcript ACA1_377260A; PH domain containing protein	join(13432..13446,13559..13734,13851..13976,14044..14717,14852..14933,15009..15077,15159..15312,15370..15507,15573..15650,15740..15831,15903..16000,16046..16093,16169..16596,16700..17023,17093..17503)	Acanthamoeba castellanii str. Neff	14916316
ACA1_377270	CDS	ACA1_377270	NW_004457391.1	17627	20021	D	encoded by transcript ACA1_377270A; Htype lectin domain containing protein	join(17627..17648,17764..17933,18024..18204,18276..18337,18460..18570,18688..18838,18926..19045,19191..19256,19277..19319,19334..19449,19566..19799,19906..20021)	Acanthamoeba castellanii str. Neff	14916317
ACA1_377280	CDS	ACA1_377280	NW_004457391.1	20349	20783	D	encoded by transcript ACA1_377280A; uncharacterized protein	20349..20783	Acanthamoeba castellanii str. Neff	14916318
ACA1_377290	CDS	ACA1_377290	NW_004457391.1	21208	21780	D	encoded by transcript ACA1_377290A; uncharacterized protein	join(21208..21249,21478..21780)	Acanthamoeba castellanii str. Neff	14916377
ACA1_377300	CDS	ACA1_377300	NW_004457391.1	21999	22466	D	encoded by transcript ACA1_377300A; uncharacterized protein	21999..22466	Acanthamoeba castellanii str. Neff	14916378
ACA1_377310	CDS	ACA1_377310	NW_004457391.1	22515	24800	R	encoded by transcript ACA1_377310A; translocase, putative	complement(join(22515..22687,22778..22899,22985..23030,23258..23412,23499..23670,23776..23877,23966..24100,24198..24280,24379..24461,24567..24800))	Acanthamoeba castellanii str. Neff	14916379
ACA1_377320	CDS	ACA1_377320	NW_004457391.1	25381	27375	D	encoded by transcript ACA1_377320A; SPRY domain containing protein	join(25381..25425,25505..25648,25717..25813,25955..26089,26163..26297,26387..26463,26540..26658,26694..26703,26738..26867,26948..27033,27102..27201,27317..27375)	Acanthamoeba castellanii str. Neff	14916380
ACA1_377330	CDS	ACA1_377330	NW_004457391.1	28172	30229	D	encoded by transcript ACA1_377330A; uncharacterized protein	28172..30229	Acanthamoeba castellanii str. Neff	14916381
ACA1_377340	CDS	ACA1_377340	NW_004457391.1	30264	35576	D	encoded by transcript ACA1_377340A; DNA replication factor Dna2	join(30264..30287,30380..30508,30606..30716,30815..30952,31055..31240,31349..31405,31503..31599,31688..31846,31920..32168,32267..32379,32444..32615,32655..32720,32822..33409,33564..33610,33710..33824,33927..34091,34165..34304,34393..34475,34597..34669,34748..34982,35062..35156,35238..35348,35424..35576)	Acanthamoeba castellanii str. Neff	14916382
ACA1_377350	CDS	ACA1_377350	NW_004457391.1	36098	42260	D	encoded by transcript ACA1_377350A; YDG/SRA domain containing protein	join(36098..36428,36567..36728,36833..37081,37197..37551,37666..37778,37856..37917,38237..38299,38388..38454,38776..39281,39350..40110,40121..40402,40494..40749,40901..40994,41076..41136,41243..41358,41464..41702,41799..42260)	Acanthamoeba castellanii str. Neff	14916383
ACA1_377360	CDS	ACA1_377360	NW_004457391.1	42447	43598	R	encoded by transcript ACA1_377360A; PB1 domain containing protein	complement(42447..43598)	Acanthamoeba castellanii str. Neff	14916384
ACA1_377370	CDS	ACA1_377370	NW_004457391.1	43954	46277	R	encoded by transcript ACA1_377370A; uncharacterized protein	complement(join(43954..44220,44288..44427,44537..44622,44776..44813,44933..45007,45104..45212,45339..45420,45529..45724,45818..45874,46074..46277))	Acanthamoeba castellanii str. Neff	14916385
ACA1_377380	CDS	ACA1_377380	NW_004457391.1	46736	47702	D	encoded by transcript ACA1_377380A; uncharacterized protein	join(46736..46844,46910..47072,47164..47368,47433..47702)	Acanthamoeba castellanii str. Neff	14916386
ACA1_377390	CDS	ACA1_377390	NW_004457391.1	47839	51302	R	encoded by transcript ACA1_377390A; acylCoA oxidase like protein	complement(join(47839..47987,48086..48271,48394..48541,48669..48790,48871..49101,49175..49271,49350..49460,49563..49650,49761..49858,49936..50113,50201..50282,50375..50464,50551..50584,50669..50805,50911..51058,51186..51302))	Acanthamoeba castellanii str. Neff	14916301
ACA1_377400	CDS	ACA1_377400	NW_004457391.1	51550	53992	D	encoded by transcript ACA1_377400A; plexin repeat domain containing protein	join(51550..51640,51841..52008,52212..52324,52426..52771,52923..53072,53136..53297,53550..53643,53848..53992)	Acanthamoeba castellanii str. Neff	14916302
ACA1_377410	CDS	ACA1_377410	NW_004457391.1	54189	60294	R	encoded by transcript ACA1_377410A; uncharacterized protein	complement(join(54189..54349,54472..54590,54689..54937,55032..55186,55274..55377,55464..55565,55666..55835,55915..56033,56170..56283,56385..56528,56596..56805,56935..57097,57166..57249,57336..57479,57581..57705,57780..58010,58082..58345,58418..58567,58651..58781,58870..58984,59073..59177,59283..59412,59520..59620,59727..59917,59989..60046,60190..60294))	Acanthamoeba castellanii str. Neff	14916303
ACA1_377420	CDS	ACA1_377420	NW_004457391.1	60379	61998	R	encoded by transcript ACA1_377420A; L1P family protein	complement(join(60379..60629,60712..60906,61001..61152,61235..61311,61496..61585,61785..61880,61960..61998))	Acanthamoeba castellanii str. Neff	14916304
ACA1_377430	CDS	ACA1_377430	NW_004457391.1	62093	63961	D	encoded by transcript ACA1_377430A; DNA repair protein rad10 subfamily protein	join(62093..62727,62791..62860,62943..63028,63112..63235,63324..63446,63542..63961)	Acanthamoeba castellanii str. Neff	14916305
ACA1_377440	CDS	ACA1_377440	NW_004457391.1	64559	66072	D	encoded by transcript ACA1_377440A; uncharacterized protein	join(64559..65219,65249..66072)	Acanthamoeba castellanii str. Neff	14916306
ACA1_377450	CDS	ACA1_377450	NW_004457391.1	66255	69116	D	encoded by transcript ACA1_377450A; uncharacterized protein	join(66255..66558,66662..66831,66936..66989,67066..67139,67223..67340,67416..67556,67624..67699,67764..67861,67944..68055,68149..68233,68304..68675,68747..69116)	Acanthamoeba castellanii str. Neff	14916307
ACA1_377460	CDS	ACA1_377460	NW_004457391.1	69230	69592	D	encoded by transcript ACA1_377460A; uncharacterized protein	69230..69592	Acanthamoeba castellanii str. Neff	14916308
ACA1_377470	CDS	ACA1_377470	NW_004457391.1	69729	71247	D	encoded by transcript ACA1_377470A; uncharacterized protein	join(69729..70715,70786..71247)	Acanthamoeba castellanii str. Neff	14916309
ACA1_377480	CDS	ACA1_377480	NW_004457391.1	71391	71729	D	encoded by transcript ACA1_377480A; uncharacterized protein	71391..71729	Acanthamoeba castellanii str. Neff	14916310
ACA1_377490	CDS	ACA1_377490	NW_004457391.1	72068	74592	D	encoded by transcript ACA1_377490A; 2oxoglutarate and iron-dependent oxygenase domain containing 1, putative	join(72068..72287,72302..72394,72482..72720,72788..72877,72959..73098,73202..73322,73439..73858,73913..74015,74139..74242,74335..74592)	Acanthamoeba castellanii str. Neff	14916311
ACA1_377500	CDS	ACA1_377500	NW_004457391.1	74672	77687	D	encoded by transcript ACA1_377500A; peptidase family c78 protein	join(74672..75320,75444..75616,75696..75890,75964..76083,76179..76302,76395..76511,76599..76640,76706..76779,76924..76982,77058..77169,77248..77350,77476..77687)	Acanthamoeba castellanii str. Neff	14916312
ACA1_377510	CDS	ACA1_377510	NW_004457391.1	78082	78541	D	encoded by transcript ACA1_377510A; cellulosebinding domain containing protein	join(78082..78142,78207..78541)	Acanthamoeba castellanii str. Neff	14916313
ACA1_377520	CDS	ACA1_377520	NW_004457391.1	78657	81817	R	encoded by transcript ACA1_377520A; cationic amino acid transporter, putative	complement(join(78657..78770,78885..78987,79141..79267,79387..79533,79623..79694,79786..79888,79980..80048,80119..80186,80304..80395,80493..80562,80684..80752,80855..80985,81648..81817))	Acanthamoeba castellanii str. Neff	14916262
ACA1_377530	CDS	ACA1_377530	NW_004457391.1	82022	85097	R	encoded by transcript ACA1_377530A; non-specific protein-tyrosine kinase	complement(join(82022..82582,82760..82993,83114..83248,83349..83512,83617..83819,83888..84039,84117..84360,84469..84681,84742..84868,84977..85097))	Acanthamoeba castellanii str. Neff	14916263
ACA1_377540	CDS	ACA1_377540	NW_004457391.1	85699	88624	R	encoded by transcript ACA1_377540A; triacylglycerol lipase	complement(join(85699..85850,85993..86331,86432..86584,86676..87032,87193..87442,87702..87785,87884..88119,88226..88394,88499..88624))	Acanthamoeba castellanii str. Neff	14916264
ACA1_377550	CDS	ACA1_377550	NW_004457391.1	89151	89682	R	encoded by transcript ACA1_377550A; uncharacterized protein	complement(join(89151..89167,89288..89456,89557..89682))	Acanthamoeba castellanii str. Neff	14916265
ACA1_377560	CDS	ACA1_377560	NW_004457391.1	90328	90477	D	encoded by transcript ACA1_377560A; uncharacterized protein	90328..90477	Acanthamoeba castellanii str. Neff	14916266
ACA1_377670	CDS	ACA1_377670	NW_004457391.1	92017	92951	R	encoded by transcript ACA1_377670A; carbohydrate binding domain cbm49 protein	complement(join(92017..92798,92891..92951))	Acanthamoeba castellanii str. Neff	14916267
ACA1_377690	CDS	ACA1_377690	NW_004457391.1	103349	104283	D	encoded by transcript ACA1_377690A; isochorismatase family superfamily protein	join(103349..103417,103490..103645,103708..103799,103887..104023,104099..104283)	Acanthamoeba castellanii str. Neff	14916269
ACA1_377700	CDS	ACA1_377700	NW_004457391.1	104741	107342	D	encoded by transcript ACA1_377700A; tetratricopeptide repeat domain containing protein	join(104741..104887,105029..105097,105248..105372,105464..105533,105698..105765,105891..106026,106104..106180,106270..106378,106444..106542,106704..106836,107242..107342)	Acanthamoeba castellanii str. Neff	14916270
ACA1_377710	CDS	ACA1_377710	NW_004457391.1	107474	110043	R	encoded by transcript ACA1_377710A; uncharacterized protein	complement(join(107474..107535,107601..107687,107761..107840,107940..108049,108177..108310,108394..108519,108594..108746,108847..109014,109104..110043))	Acanthamoeba castellanii str. Neff	14916271
ACA1_377720	CDS	ACA1_377720	NW_004457391.1	110338	111856	R	encoded by transcript ACA1_377720A; uncharacterized protein	complement(join(110338..110718,110846..111552,111679..111856))	Acanthamoeba castellanii str. Neff	14916272
ACA1_377730	CDS	ACA1_377730	NW_004457391.1	112514	112914	D	encoded by transcript ACA1_377730A; uncharacterized protein	join(112514..112555,112645..112914)	Acanthamoeba castellanii str. Neff	14916273
ACA1_377740	CDS	ACA1_377740	NW_004457391.1	113250	114129	R	encoded by transcript ACA1_377740A; adrenodoxinlike ferredoxin 2	complement(join(113250..113340,113441..113567,113662..113771,113875..113893,113985..114129))	Acanthamoeba castellanii str. Neff	14916274
ACA1_377750	CDS	ACA1_377750	NW_004457391.1	114398	114754	R	encoded by transcript ACA1_377750A; uncharacterized protein	complement(114398..114754)	Acanthamoeba castellanii str. Neff	14916275
ACA1_377760	CDS	ACA1_377760	NW_004457391.1	115171	115722	R	encoded by transcript ACA1_377760A; uncharacterized protein	complement(join(115171..115227,115329..115494,115567..115612,115677..115722))	Acanthamoeba castellanii str. Neff	14916276
ACA1_377770	CDS	ACA1_377770	NW_004457391.1	115992	117451	D	encoded by transcript ACA1_377770A; WDrepeat protein pop3, putative	join(115992..116156,116303..116415,116531..116675,116768..116955,117041..117122,117188..117248,117342..117451)	Acanthamoeba castellanii str. Neff	14916277
ACA1_377780	CDS	ACA1_377780	NW_004457391.1	117686	118389	R	encoded by transcript ACA1_377780A; NAD(P)H:quinone oxidoreductase	complement(join(117686..117888,117966..118389))	Acanthamoeba castellanii str. Neff	14916278
ACA1_377790	CDS	ACA1_377790	NW_004457391.1	119163	121232	D	encoded by transcript ACA1_377790A; origin recognition complex (orc) subunit 3 nterminus, putative	join(119163..119349,119418..119554,119707..119779,119841..120019,120100..120197,120273..120386,120465..120533,120614..120704,120773..120826,120962..121104,121205..121232)	Acanthamoeba castellanii str. Neff	14916279
ACA1_377800	CDS	ACA1_377800	NW_004457391.1	121494	123769	D	encoded by transcript ACA1_377800A; uncharacterized protein	join(121494..121633,121720..121807,121867..121944,122015..122115,122201..122325,122343..122454,122531..122764,122831..122906,123002..123196,123329..123769)	Acanthamoeba castellanii str. Neff	14916321
ACA1_377810	CDS	ACA1_377810	NW_004457391.1	124124	124965	D	encoded by transcript ACA1_377810A; expansin family protein	join(124124..124322,124400..124965)	Acanthamoeba castellanii str. Neff	14916322
ACA1_377820	CDS	ACA1_377820	NW_004457391.1	125281	126231	D	encoded by transcript ACA1_377820A; betaexpansin 1 precursor, putative	join(125281..125488,125594..126231)	Acanthamoeba castellanii str. Neff	14916323
ACA1_377830	CDS	ACA1_377830	NW_004457391.1	126527	127837	D	encoded by transcript ACA1_377830A; Ubiquitinconjugating enzyme subfamily protein	join(126527..126636,126652..126742,126847..127015,127082..127178,127254..127452,127470..127633,127669..127837)	Acanthamoeba castellanii str. Neff	14916324
ACA1_377840	CDS	ACA1_377840	NW_004457391.1	127855	128864	R	encoded by transcript ACA1_377840A; Expansin, putative	complement(join(127855..128208,128318..128586,128684..128864))	Acanthamoeba castellanii str. Neff	14916325
ACA1_377850	CDS	ACA1_377850	NW_004457391.1	129075	129654	R	encoded by transcript ACA1_377850A; clathrinassociated adaptor complex AP-1 small chain sigma1, putative	complement(join(129075..129209,129281..129361,129451..129514,129575..129654))	Acanthamoeba castellanii str. Neff	14916326
ACA1_377860	CDS	ACA1_377860	NW_004457391.1	130266	131217	R	encoded by transcript ACA1_377860A; uncharacterized protein	complement(join(130266..130442,130578..130832,130903..130947,131059..131217))	Acanthamoeba castellanii str. Neff	14916327
ACA1_377870	CDS	ACA1_377870	NW_004457391.1	131343	133947	R	encoded by transcript ACA1_377870A; uncharacterized protein	complement(join(131343..131558,131638..131778,131869..131955,132046..132180,132300..132386,132493..132582,132736..133069,133123..133378,133468..133612,133804..133947))	Acanthamoeba castellanii str. Neff	14916328
ACA1_377880	CDS	ACA1_377880	NW_004457391.1	134030	134571	R	encoded by transcript ACA1_377880A; uncharacterized protein	complement(join(134030..134461,134548..134571))	Acanthamoeba castellanii str. Neff	14916329
ACA1_377890	CDS	ACA1_377890	NW_004457391.1	134957	135610	D	encoded by transcript ACA1_377890A; Ras subfamily protein	134957..135610	Acanthamoeba castellanii str. Neff	14916330
ACA1_377910	CDS	ACA1_377910	NW_004457391.1	140388	144563	R	encoded by transcript ACA1_377910A; uncharacterized protein	complement(join(140388..140616,140718..140886,140987..141265,141399..141483,141584..141762,141862..142069,142224..142304,142387..142488,142599..142690,142780..142878,142989..143053,143123..143169,143241..143349,143474..143623,143701..143804,143950..144161,144281..144563))	Acanthamoeba castellanii str. Neff	14916332
ACA1_377920	CDS	ACA1_377920	NW_004457391.1	144630	145253	R	encoded by transcript ACA1_377920A; uncharacterized protein	complement(join(144630..144831,144946..145253))	Acanthamoeba castellanii str. Neff	14916333
ACA1_377930	CDS	ACA1_377930	NW_004457391.1	145941	147824	R	encoded by transcript ACA1_377930A; uncharacterized protein	complement(join(145941..146068,146162..146238,146346..146439,146595..146766,146879..146966,147053..147137,147235..147294,147368..147824))	Acanthamoeba castellanii str. Neff	14916334
ACA1_377940	CDS	ACA1_377940	NW_004457391.1	148213	149579	D	encoded by transcript ACA1_377940A; thaumatin domain containing protein	join(148213..148636,148753..149040,149113..149579)	Acanthamoeba castellanii str. Neff	14916335
ACA1_377950	CDS	ACA1_377950	NW_004457391.1	149616	151758	R	encoded by transcript ACA1_377950A; uncharacterized protein	complement(join(149616..149747,149820..150200,150329..150463,150541..150654,150777..150914,151027..151509,151522..151613,151737..151758))	Acanthamoeba castellanii str. Neff	14916336
ACA1_377960	CDS	ACA1_377960	NW_004457391.1	152045	154166	D	encoded by transcript ACA1_377960A; uncharacterized protein	join(152045..152486,152643..152741,152864..152907,152982..153051,153114..153634,153718..153848,153910..154012,154098..154166)	Acanthamoeba castellanii str. Neff	14916337
ACA1_377970	CDS	ACA1_377970	NW_004457391.1	154374	154645	R	encoded by transcript ACA1_377970A; uncharacterized protein	complement(join(154374..154448,154511..154645))	Acanthamoeba castellanii str. Neff	14916338
ACA1_377980	CDS	ACA1_377980	NW_004457391.1	155270	157507	D	encoded by transcript ACA1_377980A; NPL4 family protein	join(155270..155308,155512..155687,155766..155850,155931..156069,156159..156274,156356..156503,156594..156787,156934..157151,157444..157507)	Acanthamoeba castellanii str. Neff	14916357
ACA1_377990	CDS	ACA1_377990	NW_004457391.1	157943	159354	R	encoded by transcript ACA1_377990A; uncharacterized protein	complement(join(157943..158776,158797..159354))	Acanthamoeba castellanii str. Neff	14916358
ACA1_378000	CDS	ACA1_378000	NW_004457391.1	160617	162540	D	encoded by transcript ACA1_378000A; hydrolase, NUDIX domain containing protein	join(160617..161421,161503..162073,162201..162540)	Acanthamoeba castellanii str. Neff	14916359
ACA1_378010	CDS	ACA1_378010	NW_004457391.1	162713	165122	D	encoded by transcript ACA1_378010A; Peptide-aspartate beta-dioxygenase	join(162713..163036,163123..163311,163381..163514,163604..163722,163848..163991,164066..164114,164213..164303,164421..164768,164863..164964,165036..165122)	Acanthamoeba castellanii str. Neff	14916360
ACA1_378030	CDS	ACA1_378030	NW_004457391.1	168932	170736	R	encoded by transcript ACA1_378030A; uncharacterized protein	complement(join(168932..168950,169003..169249,169360..169768,169865..170011,170106..170228,170311..170475,170653..170736))	Acanthamoeba castellanii str. Neff	14916362
ACA1_378040	CDS	ACA1_378040	NW_004457391.1	171628	179225	R	encoded by transcript ACA1_378040A; HEAT repeat domain containing protein	complement(join(171628..171690,171782..171949,172026..172153,172251..172405,172515..172630,172793..173094,173178..173405,173502..173707,173830..174020,174093..174233,174270..174316,174412..174686,174778..175243,175359..176367,176474..176616,176695..176761,176852..176954,177025..177186,177288..177414,177493..177606,177742..177897,178015..178098,178211..178313,178421..178489,178617..178892,179009..179084,179185..179225))	Acanthamoeba castellanii str. Neff	14916363
ACA1_378060	CDS	ACA1_378060	NW_004457391.1	182315	182470	R	encoded by transcript ACA1_378060A; uncharacterized protein	complement(182315..182470)	Acanthamoeba castellanii str. Neff	14916365
ACA1_378070	CDS	ACA1_378070	NW_004457391.1	183606	185054	D	encoded by transcript ACA1_378070A; uncharacterized protein	183606..185054	Acanthamoeba castellanii str. Neff	14916366
ACA1_378080	CDS	ACA1_378080	NW_004457391.1	185377	185912	R	encoded by transcript ACA1_378080A; uncharacterized protein	complement(join(185377..185389,185467..185698,185759..185912))	Acanthamoeba castellanii str. Neff	14916367
ACA1_378090	CDS	ACA1_378090	NW_004457391.1	186816	187756	D	encoded by transcript ACA1_378090A; uncharacterized protein	join(186816..187089,187162..187476,187548..187756)	Acanthamoeba castellanii str. Neff	14916368
ACA1_378100	CDS	ACA1_378100	NW_004457391.1	189022	189309	R	encoded by transcript ACA1_378100A; uncharacterized protein	complement(join(189022..189066,189103..189309))	Acanthamoeba castellanii str. Neff	14916369
ACA1_378110	CDS	ACA1_378110	NW_004457391.1	189695	190833	D	encoded by transcript ACA1_378110A; uncharacterized protein	join(189695..189736,189810..189895,189977..190158,190292..190720,190808..190833)	Acanthamoeba castellanii str. Neff	14916370
ACA1_378120	CDS	ACA1_378120	NW_004457391.1	191107	192067	R	encoded by transcript ACA1_378120A; uncharacterized protein	complement(join(191107..191225,191389..192067))	Acanthamoeba castellanii str. Neff	14916371
ACA1_378130	CDS	ACA1_378130	NW_004457391.1	192508	194469	R	encoded by transcript ACA1_378130A; uncharacterized protein	complement(join(192508..192570,192663..193436,193555..193641,193791..193827,193874..194469))	Acanthamoeba castellanii str. Neff	14916372
ACA1_378140	CDS	ACA1_378140	NW_004457391.1	195144	196246	R	encoded by transcript ACA1_378140A; uncharacterized protein	complement(join(195144..195167,195248..195294,195364..195501,195593..195724,195808..196246))	Acanthamoeba castellanii str. Neff	14916373
ACA1_378150	CDS	ACA1_378150	NW_004457391.1	197063	198350	R	encoded by transcript ACA1_378150A; uncharacterized protein	complement(join(197063..197265,197366..197500,197588..197706,197865..198155,198253..198350))	Acanthamoeba castellanii str. Neff	14916374
ACA1_378160	CDS	ACA1_378160	NW_004457391.1	198765	200011	R	encoded by transcript ACA1_378160A; Ubiquitin carboxylterminal hydrolase, family 1	complement(join(198765..198863,198948..199213,199323..199411,199556..199652,199768..199870,199940..200011))	Acanthamoeba castellanii str. Neff	14916375
ACA1_378170	CDS	ACA1_378170	NW_004457391.1	200177	201921	R	encoded by transcript ACA1_378170A; slime mold cyclic amp receptor protein	complement(join(200177..200289,200418..200475,200564..200681,200767..200905,200990..201115,201177..201285,201380..201471,201559..201625,201745..201921))	Acanthamoeba castellanii str. Neff	14916339
ACA1_378180	CDS	ACA1_378180	NW_004457391.1	202203	204908	R	encoded by transcript ACA1_378180A; diacylglycerol kinase catalytic domain containing protein	complement(join(202203..202549,202620..202766,202870..203021,203104..203191,203261..203342,203438..203575,203663..203777,203944..204908))	Acanthamoeba castellanii str. Neff	14916340
ACA1_378190	CDS	ACA1_378190	NW_004457391.1	205340	206648	R	encoded by transcript ACA1_378190A; uncharacterized protein	complement(join(205340..205376,205456..206122,206205..206369,206469..206560,206632..206648))	Acanthamoeba castellanii str. Neff	14916341
ACA1_378200	CDS	ACA1_378200	NW_004457391.1	207695	210735	R	encoded by transcript ACA1_378200A; ATPdependent DNA helicase, RecQ subfamily protein	complement(join(207695..207728,207838..207904,207991..208392,208527..208687,208768..208971,209086..209237,209381..209444,209525..209663,209723..209785,209895..209985,210058..210173,210258..210326,210432..210735))	Acanthamoeba castellanii str. Neff	14916342
ACA1_378210	CDS	ACA1_378210	NW_004457391.1	210960	214277	R	encoded by transcript ACA1_378210A; PX domain containing protein	complement(join(210960..211043,211145..211227,211485..211622,211723..211836,211922..212034,212113..212169,212262..212326,212421..212548,212646..212696,212781..212859,212955..213048,213170..213267,213360..213449,213534..214277))	Acanthamoeba castellanii str. Neff	14916343
ACA1_378220	CDS	ACA1_378220	NW_004457391.1	214813	215794	R	encoded by transcript ACA1_378220A; ribosomal L18p/L5e family	complement(join(214813..214917,215024..215794))	Acanthamoeba castellanii str. Neff	14916344
ACA1_378240	CDS	ACA1_378240	NW_004457391.1	219693	222048	D	encoded by transcript ACA1_378240A; XaaPro aminopeptidase 3, putative	join(219693..219792,219865..219988,220080..220153,220261..220388,220483..220612,220687..220815,220897..221038,221134..221284,221397..221510,221636..221790,221916..222048)	Acanthamoeba castellanii str. Neff	14916346
ACA1_378250	CDS	ACA1_378250	NW_004457391.1	222213	223401	D	encoded by transcript ACA1_378250A; uncharacterized protein	join(222213..222368,222533..222790,222897..223076,223189..223401)	Acanthamoeba castellanii str. Neff	14916347
ACA1_378260	CDS	ACA1_378260	NW_004457391.1	223873	224827	D	encoded by transcript ACA1_378260A; uncharacterized protein	join(223873..224074,224208..224295,224434..224560,224804..224827)	Acanthamoeba castellanii str. Neff	14916348
ACA1_378270	CDS	ACA1_378270	NW_004457391.1	225444	225949	D	encoded by transcript ACA1_378270A; uncharacterized protein	join(225444..225594,225625..225693,225750..225949)	Acanthamoeba castellanii str. Neff	14916349
ACA1_378280	CDS	ACA1_378280	NW_004457391.1	225984	229942	D	encoded by transcript ACA1_378280A; uncharacterized protein	join(225984..226158,226229..226371,226515..226830,227006..227154,227250..227582,227832..228147,228305..228453,228652..228984,229050..229167,229295..229457,229531..229942)	Acanthamoeba castellanii str. Neff	14916350
ACA1_378490	CDS	ACA1_378490	NW_004457391.1	230008	231968	R	encoded by transcript ACA1_378490A; uncharacterized protein	complement(join(230008..230233,230314..230438,230528..230634,230725..230851,230940..231101,231240..231417,231490..231689,231811..231920,231941..231968))	Acanthamoeba castellanii str. Neff	14916351
ACA1_378610	CDS	ACA1_378610	NW_004457391.1	235097	236864	R	encoded by transcript ACA1_378610A; uncharacterized protein	complement(join(235097..235350,235396..235464,235506..235742,236165..236864))	Acanthamoeba castellanii str. Neff	14916353
ACA1_378620	CDS	ACA1_378620	NW_004457391.1	238152	240294	R	encoded by transcript ACA1_378620A; uncharacterized protein	complement(join(238152..238496,238579..238733,238819..239359,239390..239737,239753..239815,239890..240294))	Acanthamoeba castellanii str. Neff	14916354
ACA1_378630	CDS	ACA1_378630	NW_004457391.1	241182	244185	R	encoded by transcript ACA1_378630A; uncharacterized protein	complement(join(241182..241331,241440..241538,241829..242100,242198..242253,242395..242468,242577..242686,242783..242888,242978..243070,243163..243300,243323..243558,243676..243799,243890..243968,244085..244185))	Acanthamoeba castellanii str. Neff	14916355
ACA1_378740	CDS	ACA1_378740	NW_004457391.1	244698	245081	D	encoded by transcript ACA1_378740A; Saposin family type B, region 1 protein	join(244698..244760,244800..245081)	Acanthamoeba castellanii str. Neff	14916356
ACA1_378750	CDS	ACA1_378750	NW_004457391.1	245454	249636	D	encoded by transcript ACA1_378750A; uncharacterized protein	join(245454..245547,245728..245862,246011..246058,246143..246313,246425..246552,246710..246785,246888..246982,247146..247243,247356..247470,247588..247732,248053..248268,248342..249172,249266..249636)	Acanthamoeba castellanii str. Neff	14916387
ACA1_378760	CDS	ACA1_378760	NW_004457391.1	249753	250109	R	encoded by transcript ACA1_378760A; uncharacterized protein	complement(249753..250109)	Acanthamoeba castellanii str. Neff	14916388
ACA1_378870	CDS	ACA1_378870	NW_004457391.1	250423	255440	R	encoded by transcript ACA1_378870A; TBC domain containing protein	complement(join(250423..250519,250613..250806,250920..251092,251173..251430,251518..251691,251770..251950,252068..252201,252326..252473,252605..252618,252641..253029,253408..253514,253703..253721,253857..253975,254077..254229,254366..254507,254648..254703,254799..254922,255001..255079,255169..255344,255376..255440))	Acanthamoeba castellanii str. Neff	14916389
ACA1_378880	CDS	ACA1_378880	NW_004457391.1	255559	256566	R	encoded by transcript ACA1_378880A; uncharacterized protein	complement(255559..256566)	Acanthamoeba castellanii str. Neff	14916390
ACA1_378890	CDS	ACA1_378890	NW_004457391.1	257495	258800	R	encoded by transcript ACA1_378890A; ccr4associated factor, putative	complement(join(257495..257671,257798..258137,258332..258525,258684..258800))	Acanthamoeba castellanii str. Neff	14916391
ACA1_378910	CDS	ACA1_378910	NW_004457391.1	263008	263560	R	encoded by transcript ACA1_378910A; uncharacterized protein	complement(join(263008..263077,263187..263560))	Acanthamoeba castellanii str. Neff	14916393
ACA1_378920	CDS	ACA1_378920	NW_004457391.1	264600	265148	R	encoded by transcript ACA1_378920A; uncharacterized protein	complement(join(264600..264650,264774..265148))	Acanthamoeba castellanii str. Neff	14916394
ACA1_378930	CDS	ACA1_378930	NW_004457391.1	266192	266696	R	encoded by transcript ACA1_378930A; uncharacterized protein	complement(join(266192..266242,266367..266696))	Acanthamoeba castellanii str. Neff	14916395
ACA1_379040	CDS	ACA1_379040	NW_004457391.1	268836	269377	R	encoded by transcript ACA1_379040A; uncharacterized protein	complement(join(268836..268939,269122..269377))	Acanthamoeba castellanii str. Neff	14916396
ACA1_379050	CDS	ACA1_379050	NW_004457391.1	269979	271815	R	encoded by transcript ACA1_379050A; ATP-binding domain containing protein 4, putative	complement(join(269979..270046,270149..270296,270423..270546,270621..270712,270844..270921,270995..271100,271220..271291,271364..271456,271534..271656,271760..271815))	Acanthamoeba castellanii str. Neff	14916397
ACA1_379060	CDS	ACA1_379060	NW_004457391.1	272113	273632	D	encoded by transcript ACA1_379060A; casein kinase ii subunit alpha, putative	join(272113..272363,272454..272697,272775..272847,272933..273127,273246..273414,273536..273632)	Acanthamoeba castellanii str. Neff	14916398
ACA1_379070	CDS	ACA1_379070	NW_004457391.1	273820	275311	D	encoded by transcript ACA1_379070A; CDNA: fis, clone, putative	join(273820..274054,274072..274248,274321..274386,274505..274576,274640..274724,274912..275056,275150..275311)	Acanthamoeba castellanii str. Neff	14916399
ACA1_379080	CDS	ACA1_379080	NW_004457391.1	275835	276947	D	encoded by transcript ACA1_379080A; GATA zinc finger domain containing protein	join(275835..275891,275964..276596,276737..276786,276866..276947)	Acanthamoeba castellanii str. Neff	14916400
ACA1_379090	CDS	ACA1_379090	NW_004457391.1	277092	277841	D	encoded by transcript ACA1_379090A; uncharacterized protein	join(277092..277263,277399..277463,277524..277841)	Acanthamoeba castellanii str. Neff	14916401
ACA1_379100	CDS	ACA1_379100	NW_004457391.1	277882	278870	R	encoded by transcript ACA1_379100A; uncharacterized protein	complement(join(277882..278206,278292..278425,278504..278623,278700..278870))	Acanthamoeba castellanii str. Neff	14916402
ACA1_379110	CDS	ACA1_379110	NW_004457391.1	279098	280209	R	encoded by transcript ACA1_379110A; translation elongation factor 2, putative	complement(join(279098..279383,279480..279582,279683..279736,279747..279828,279967..>280209))	Acanthamoeba castellanii str. Neff	14916403
ACA1_379120	CDS	ACA1_379120	NW_004457391.1	280242	280631	D	encoded by transcript ACA1_379120A; ketosteroid isomeraselike protein	280242..280631	Acanthamoeba castellanii str. Neff	14916404
ACA1_379130	CDS	ACA1_379130	NW_004457391.1	280790	285756	R	encoded by transcript ACA1_379130A; uncharacterized protein	complement(join(280790..280925,280939..281389,281504..281603,281730..281837,281996..282085,282191..282329,282489..282599,282669..282771,282856..282940,283056..283158,283248..283430,283509..283638,283763..283999,284021..284262,284321..284516,284531..284887,284985..285137,285277..285346,285419..285531,285621..285756))	Acanthamoeba castellanii str. Neff	14916405
ACA1_379140	CDS	ACA1_379140	NW_004457391.1	286523	288521	D	encoded by transcript ACA1_379140A; carbohydrate binding domain cbm49 protein	join(286523..286586,286668..286856,286944..287192,287264..287685,287765..287846,287957..288090,288178..288412,288502..288521)	Acanthamoeba castellanii str. Neff	14916406
ACA1_379150	CDS	ACA1_379150	NW_004457391.1	288759	290045	D	encoded by transcript ACA1_379150A; uncharacterized protein	288759..290045	Acanthamoeba castellanii str. Neff	14916407
ACA1_379160	CDS	ACA1_379160	NW_004457391.1	291173	294237	D	encoded by transcript ACA1_379160A; Ubox domain containing protein	join(<291173..291264,291352..291812,291940..292024,292134..293934,293947..294237)	Acanthamoeba castellanii str. Neff	14916408
ACA1_379170	CDS	ACA1_379170	NW_004457391.1	294327	296703	D	encoded by transcript ACA1_379170A; uncharacterized protein	join(294327..294398,294512..294609,294696..294714,294921..295033,295207..295303,295409..295519,295614..295682,295810..295917,296018..296187,296298..296384,296526..>296703)	Acanthamoeba castellanii str. Neff	14916409
ACA1_379180	CDS	ACA1_379180	NW_004457391.1	297034	297624	D	encoded by transcript ACA1_379180A; uncharacterized protein	join(297034..297050,297117..297226,297302..297417,297514..297624)	Acanthamoeba castellanii str. Neff	14916410
ACA1_379190	CDS	ACA1_379190	NW_004457391.1	298017	299278	R	encoded by transcript ACA1_379190A; uncharacterized protein	complement(join(298017..298245,298320..299278))	Acanthamoeba castellanii str. Neff	14916411
ACA1_379200	CDS	ACA1_379200	NW_004457391.1	299784	300619	D	encoded by transcript ACA1_379200A; uncharacterized protein	join(299784..299790,299982..300476,300543..300619)	Acanthamoeba castellanii str. Neff	14916412
ACA1_379210	CDS	ACA1_379210	NW_004457391.1	300711	302538	D	encoded by transcript ACA1_379210A; RNA pseudouridine synthase superfamily protein	join(300711..300717,300839..300907,301000..301121,301210..301278,301351..301470,301598..301676,301795..301936,302021..302084,302125..302229,302434..302538)	Acanthamoeba castellanii str. Neff	14916413
ACA1_379220	CDS	ACA1_379220	NW_004457391.1	302614	304413	R	encoded by transcript ACA1_379220A; FYVE zinc finger domain containing protein	complement(join(302614..302837,302937..302955,303029..303131,303220..303397,303519..303618,303755..303859,303975..304117,304214..304229,304300..304413))	Acanthamoeba castellanii str. Neff	14916414
ACA1_379230	CDS	ACA1_379230	NW_004457391.1	304640	306123	D	encoded by transcript ACA1_379230A; RNA recognition motif domain containing protein	join(304640..304903,305413..305607,305720..306000,306090..306123)	Acanthamoeba castellanii str. Neff	14916415
ACA1_379240	CDS	ACA1_379240	NW_004457391.1	306221	307295	R	encoded by transcript ACA1_379240A; K+ channel tetramerization subfamily protein	complement(join(306221..306805,306918..307295))	Acanthamoeba castellanii str. Neff	14916416
ACA1_379250	CDS	ACA1_379250	NW_004457391.1	307383	308569	R	encoded by transcript ACA1_379250A; uncharacterized protein	complement(join(307383..307477,307583..307698,307812..307909,307932..308061,308094..308569))	Acanthamoeba castellanii str. Neff	14916417
ACA1_379260	CDS	ACA1_379260	NW_004457391.1	310237	314535	D	encoded by transcript ACA1_379260A; coatmer subunit, putative	join(310237..310532,310707..310950,311031..311213,311290..311436,311517..311575,311658..311841,311940..312173,312295..312568,312671..312885,312956..313283,313356..313424,313506..313627,313709..314055,314146..314270,314360..314535)	Acanthamoeba castellanii str. Neff	14916418
ACA1_379280	CDS	ACA1_379280	NW_004457391.1	319803	323859	R	encoded by transcript ACA1_379280A; uncharacterized protein	complement(join(319803..319824,319903..319994,320096..320203,320295..320380,320516..320642,320734..321209,321290..321432,321559..321604,321678..321812,321939..322540,322586..322631,322729..322779,322853..323742,323855..323859))	Acanthamoeba castellanii str. Neff	14916420
ACA1_379290	CDS	ACA1_379290	NW_004457391.1	324272	325889	D	encoded by transcript ACA1_379290A; uncharacterized protein	join(324272..324632,324794..324860,324947..325057,325204..325332,325419..325621,325729..325889)	Acanthamoeba castellanii str. Neff	14916421
ACA1_379300	CDS	ACA1_379300	NW_004457391.1	326037	328117	R	encoded by transcript ACA1_379300A; uncharacterized protein	complement(join(326037..326146,326236..326415,326508..326598,326707..326835,326877..326937,327018..327093,327193..327316,327400..327517,327610..327683,327760..327843,327911..328117))	Acanthamoeba castellanii str. Neff	14916422
ACA1_379310	CDS	ACA1_379310	NW_004457391.1	328295	328939	R	encoded by transcript ACA1_379310A; dual specificity phosphatase, catalytic domain containing protein	complement(328295..328939)	Acanthamoeba castellanii str. Neff	14916286
ACA1_379320	CDS	ACA1_379320	NW_004457391.1	329011	329808	R	encoded by transcript ACA1_379320A; uncharacterized protein	complement(329011..329808)	Acanthamoeba castellanii str. Neff	14916287
ACA1_379330	CDS	ACA1_379330	NW_004457391.1	330044	331875	R	encoded by transcript ACA1_379330A; polynucleotide adenyltransferase	complement(join(330044..330263,330364..330476,330594..330662,330848..330899,330984..331016,331106..331233,331402..331875))	Acanthamoeba castellanii str. Neff	14916288
ACA1_379340	CDS	ACA1_379340	NW_004457391.1	332074	334828	R	encoded by transcript ACA1_379340A; C2 domain containing protein	complement(join(332074..332529,332625..332769,332844..333531,333551..333951,334027..334359,334501..334678,334744..334828))	Acanthamoeba castellanii str. Neff	14916289
ACA1_379350	CDS	ACA1_379350	NW_004457391.1	335359	340132	D	encoded by transcript ACA1_379350A; uncharacterized protein	join(335359..335490,335553..335681,335776..335877,335977..336117,336192..336387,336537..336649,336729..336833,336932..337037,337386..337425,337597..337666,337776..337834,337919..338051,338143..338283,338368..338451,338548..338613,338682..338798,338900..339109,339221..339388,339752..339829,339926..340132)	Acanthamoeba castellanii str. Neff	14916290
ACA1_379360	CDS	ACA1_379360	NW_004457391.1	340634	341504	D	encoded by transcript ACA1_379360A; Bbox zinc finger domain containing protein	join(340634..341160,341183..341504)	Acanthamoeba castellanii str. Neff	14916291
ACA1_379370	CDS	ACA1_379370	NW_004457391.1	342160	342874	R	encoded by transcript ACA1_379370A; NHL repeatcontaining protein	complement(join(342160..342535,342570..342874))	Acanthamoeba castellanii str. Neff	14916292
ACA1_379380	CDS	ACA1_379380	NW_004457391.1	342877	345216	R	encoded by transcript ACA1_379380A; DnaJ domain containing protein	complement(join(342877..343068,343271..343474,343624..343918,344035..344159,344296..344428,344555..344954,345054..345144,345175..345216))	Acanthamoeba castellanii str. Neff	14916293
ACA1_379390	CDS	ACA1_379390	NW_004457391.1	345816	348023	R	encoded by transcript ACA1_379390A; uncharacterized protein	complement(join(345816..346437,346502..346547,346680..346748,346826..346906,346988..347066,347180..347292,347366..347379,347512..347650,347748..347835,347925..>348023))	Acanthamoeba castellanii str. Neff	14916294
ACA1_379400	CDS	ACA1_379400	NW_004457391.1	348460	352779	D	encoded by transcript ACA1_379400A; uncharacterized protein	join(348460..348510,348837..348922,349050..349204,349297..349454,349568..349649,349744..349844,349968..350119,350205..350250,350362..350441,350549..350772,350856..350965,351098..351170,351266..351347,351436..351603,351715..351826,351933..352097,352204..352257,352357..352440,352576..352779)	Acanthamoeba castellanii str. Neff	14916295
ACA1_379410	CDS	ACA1_379410	NW_004457391.1	353158	361530	D	encoded by transcript ACA1_379410A; Filamin repeat domain containing protein	join(353158..353161,353433..353555,353888..354042,354200..354395,354538..354693,354799..354820,354906..355081,355172..355378,355464..355543,355690..355913,356034..356859,356963..357052,357122..357272,357360..357500,357597..358725,358804..358904,359046..359309,359397..359603,359654..361530)	Acanthamoeba castellanii str. Neff	14916296
ACA1_379420	CDS	ACA1_379420	NW_004457391.1	361614	362252	R	encoded by transcript ACA1_379420A; uncharacterized protein	complement(join(361614..361983,362176..362252))	Acanthamoeba castellanii str. Neff	14916297
ACA1_379430	CDS	ACA1_379430	NW_004457391.1	362706	366669	D	encoded by transcript ACA1_379430A; Fbox domain containing protein	join(362706..362770,362850..362908,363021..363132,363240..363353,363467..363563,363700..364128,364195..364268,364380..365313,365461..365690,365853..366669)	Acanthamoeba castellanii str. Neff	14916298
ACA1_379440	CDS	ACA1_379440	NW_004457391.1	366746	367045	R	encoded by transcript ACA1_379440A; uncharacterized protein	complement(366746..367045)	Acanthamoeba castellanii str. Neff	14916299
ACA1_379450	CDS	ACA1_379450	NW_004457391.1	367530	369258	R	encoded by transcript ACA1_379450A; GPI anchored endo1,3(4)-beta-glucanase	complement(join(367530..367601,367690..367745,367844..367941,368033..368132,368254..368329,368421..368537,368630..368724,368834..368995,369090..369258))	Acanthamoeba castellanii str. Neff	14916300
ACA1_379460	CDS	ACA1_379460	NW_004457391.1	369533	371942	R	encoded by transcript ACA1_379460A; Fbox domain containing protein	complement(join(369533..369864,369948..370083,370160..370677,370770..370910,371008..371097,371243..371306,371556..371630,371701..371737,371857..371942))	Acanthamoeba castellanii str. Neff	14916280
ACA1_379470	CDS	ACA1_379470	NW_004457391.1	372314	372790	D	encoded by transcript ACA1_379470A; uncharacterized protein	372314..372790	Acanthamoeba castellanii str. Neff	14916281
ACA1_379480	CDS	ACA1_379480	NW_004457391.1	373202	378697	D	encoded by transcript ACA1_379480A; uncharacterized protein	join(373202..373307,373422..373541,373621..373707,373796..373927,374047..374157,374251..374382,374484..374551,374646..375021,375136..375209,375324..375501,375612..375823,375926..376027,376109..376222,376380..376748,376888..376946,377034..377185,377321..377523,377664..377773,377890..378039,378185..378375,378459..378697)	Acanthamoeba castellanii str. Neff	14916282
ACA1_379490	CDS	ACA1_379490	NW_004457391.1	378884	379092	R	encoded by transcript ACA1_379490A; uncharacterized protein	complement(join(378884..378994,379015..379092))	Acanthamoeba castellanii str. Neff	14916283
ACA1_379500	CDS	ACA1_379500	NW_004457391.1	379313	381418	D	encoded by transcript ACA1_379500A; Bbox zinc finger domain containing protein	379313..381418	Acanthamoeba castellanii str. Neff	14916284
ACA1_379510	CDS	ACA1_379510	NW_004457391.1	381832	382677	R	encoded by transcript ACA1_379510A; uncharacterized protein	complement(join(381832..381849,381973..382131,382250..382446,382539..>382677))	Acanthamoeba castellanii str. Neff	14916285
ACA1_163310	CDS	ACA1_163310	NW_004457390.1	384	1737	D	encoded by transcript ACA1_163310A; CBS domain containing protein	join(384..517,586..650,721..867,955..1112,1187..1293,1381..1544,1634..1737)	Acanthamoeba castellanii str. Neff	14916175
ACA1_163320	CDS	ACA1_163320	NW_004457390.1	2610	5355	D	encoded by transcript ACA1_163320A; cellulase (glycosyl hydrolase family 5) subfamily protein	join(2610..2756,2855..3124,3189..3358,3428..3481,3548..3629,3702..3911,3956..4086,4118..4331,4418..4687,4758..4981,5049..5130,5203..5355)	Acanthamoeba castellanii str. Neff	14916176
ACA1_163330	CDS	ACA1_163330	NW_004457390.1	5431	6945	D	encoded by transcript ACA1_163330A; uncharacterized protein	join(5431..5451,6086..6233,6321..6460,6651..6718,6876..6945)	Acanthamoeba castellanii str. Neff	14916177
ACA1_163350	CDS	ACA1_163350	NW_004457390.1	8907	9212	D	encoded by transcript ACA1_163350A; uncharacterized protein	8907..9212	Acanthamoeba castellanii str. Neff	14916179
ACA1_163360	CDS	ACA1_163360	NW_004457390.1	9338	11961	R	encoded by transcript ACA1_163360A; Ras subfamily protein	complement(join(9338..9559,9665..9927,10006..10102,10187..10312,10380..10474,10589..10654,10775..10868,10973..11310,11499..11961))	Acanthamoeba castellanii str. Neff	14916180
ACA1_163370	CDS	ACA1_163370	NW_004457390.1	12337	18095	D	encoded by transcript ACA1_163370A; SH3 domain containing protein	join(12337..12363,12674..12736,12826..12970,13071..13242,13357..13426,13513..13613,13687..13778,13854..14112,14244..14344,14415..15400,15502..15666,15766..15937,16037..16524,16591..16860,16979..17166,17361..17461,17578..17702,17810..17931,18029..18095)	Acanthamoeba castellanii str. Neff	14916238
ACA1_163380	CDS	ACA1_163380	NW_004457390.1	18207	20963	R	encoded by transcript ACA1_163380A; queuine tRNAribosyltransferase	complement(join(18207..18334,18422..18549,18664..18733,18806..18882,19019..19198,19313..19397,19535..19599,19689..19841,19960..20039,20118..20211,20362..20429,20525..20580,20657..20963))	Acanthamoeba castellanii str. Neff	14916239
ACA1_163390	CDS	ACA1_163390	NW_004457390.1	21218	21988	D	encoded by transcript ACA1_163390A; uncharacterized protein	join(21218..21588,21655..21988)	Acanthamoeba castellanii str. Neff	14916240
ACA1_163400	CDS	ACA1_163400	NW_004457390.1	22490	25356	R	encoded by transcript ACA1_163400A; Ras family protein	complement(join(22490..22873,22899..23067,23191..24170,24292..24411,24530..24659,24766..24909,25042..25109,25252..25356))	Acanthamoeba castellanii str. Neff	14916241
ACA1_163410	CDS	ACA1_163410	NW_004457390.1	26069	32250	D	encoded by transcript ACA1_163410A; cupin superfamily subfamily protein	join(26069..26543,26652..26719,26805..27309,27537..27892,27979..28041,28181..28308,28386..28477,28553..28630,28745..28831,28936..29019,29097..29175,29239..29327,29408..29516,29624..29946,30050..30151,30231..30298,30407..30481,30576..30651,30770..30868,30967..31061,31225..31359,31455..31520,31655..31771,31853..31999,32107..32250)	Acanthamoeba castellanii str. Neff	14916242
ACA1_163420	CDS	ACA1_163420	NW_004457390.1	32660	32893	D	encoded by transcript ACA1_163420A; uncharacterized protein	32660..32893	Acanthamoeba castellanii str. Neff	14916227
ACA1_163440	CDS	ACA1_163440	NW_004457390.1	36466	38406	R	encoded by transcript ACA1_163440A; tetratricopeptide repeat domain containing protein	complement(join(36466..36612,36727..36935,37015..37370,37441..37543,37624..37718,37826..37921,37994..38102,38178..38406))	Acanthamoeba castellanii str. Neff	14916229
ACA1_163450	CDS	ACA1_163450	NW_004457390.1	38492	40106	D	encoded by transcript ACA1_163450A; pfkBtype carbohydrate kinase family protein	join(38492..38617,38784..38947,39016..39142,39234..39441,39585..39790,40080..40106)	Acanthamoeba castellanii str. Neff	14916230
ACA1_163460	CDS	ACA1_163460	NW_004457390.1	40915	42069	R	encoded by transcript ACA1_163460A; uncharacterized protein	complement(join(40915..40971,41105..41208,41294..41384,41507..41621,41714..41836,41906..42069))	Acanthamoeba castellanii str. Neff	14916231
ACA1_163470	CDS	ACA1_163470	NW_004457390.1	42539	47139	D	encoded by transcript ACA1_163470A; protein kinase domain containing protein	join(42539..42963,43365..43454,43728..43836,44051..44079,44198..44367,44472..45213,45286..45359,45449..45663,45790..45960,46052..46187,46348..46367,46398..46582,46673..46823,46993..47139)	Acanthamoeba castellanii str. Neff	14916232
ACA1_163480	CDS	ACA1_163480	NW_004457390.1	47526	47753	D	encoded by transcript ACA1_163480A; uncharacterized protein	47526..47753	Acanthamoeba castellanii str. Neff	14916233
ACA1_163490	CDS	ACA1_163490	NW_004457390.1	47881	49935	R	encoded by transcript ACA1_163490A; uncharacterized protein	complement(join(47881..48036,48143..48249,48381..48425,48480..48528,48626..48715,48978..49049,49319..49570,49663..49935))	Acanthamoeba castellanii str. Neff	14916234
ACA1_163500	CDS	ACA1_163500	NW_004457390.1	51165	52762	R	encoded by transcript ACA1_163500A; uncharacterized protein	complement(join(51165..51379,51502..51633,51706..52326,52360..52721,52752..52762))	Acanthamoeba castellanii str. Neff	14916235
ACA1_163510	CDS	ACA1_163510	NW_004457390.1	52897	54366	R	encoded by transcript ACA1_163510A; hydrolase, TatD family protein	complement(join(52897..52989,53244..53293,53355..53556,53676..53720,53792..53925,54029..54163,54249..54366))	Acanthamoeba castellanii str. Neff	14916236
ACA1_163620	CDS	ACA1_163620	NW_004457390.1	54584	55159	R	encoded by transcript ACA1_163620A; uncharacterized protein	complement(54584..55159)	Acanthamoeba castellanii str. Neff	14916237
ACA1_163630	CDS	ACA1_163630	NW_004457390.1	57785	60077	R	encoded by transcript ACA1_163630A; RNA ligase (ATP), putative	complement(join(57785..58019,58152..58244,58328..58488,58597..58702,58810..58881,58980..59080,59180..59255,59404..59482,59566..59662,59757..59828,59934..60077))	Acanthamoeba castellanii str. Neff	14916250
ACA1_163640	CDS	ACA1_163640	NW_004457390.1	60813	62351	R	encoded by transcript ACA1_163640A; uncharacterized protein	complement(join(60813..61008,61150..61243,61339..61381,61426..61593,61693..61790,61908..61994,62072..62351))	Acanthamoeba castellanii str. Neff	14916251
ACA1_163650	CDS	ACA1_163650	NW_004457390.1	62838	64861	D	encoded by transcript ACA1_163650A; uncharacterized protein	join(62838..62982,63060..63163,63229..63531,63691..63783,63892..63981,64094..64157,64238..64297,64455..64517,64600..64641,64737..64861)	Acanthamoeba castellanii str. Neff	14916252
ACA1_163660	CDS	ACA1_163660	NW_004457390.1	64974	66067	R	encoded by transcript ACA1_163660A; uncharacterized protein	complement(join(64974..65090,65161..65265,65344..65451,65566..65575,65664..65673,65685..65732,65827..66067))	Acanthamoeba castellanii str. Neff	14916253
ACA1_163670	CDS	ACA1_163670	NW_004457390.1	66439	67710	D	encoded by transcript ACA1_163670A; universal stress family protein	join(66439..67206,67370..67459,67561..67710)	Acanthamoeba castellanii str. Neff	14916254
ACA1_163680	CDS	ACA1_163680	NW_004457390.1	68324	69588	R	encoded by transcript ACA1_163680A; UBX domain containing protein	complement(join(68324..68422,68507..68569,68715..68797,68872..69034,69117..69198,69324..69411,69507..69588))	Acanthamoeba castellanii str. Neff	14916255
ACA1_163790	CDS	ACA1_163790	NW_004457390.1	70415	72014	R	encoded by transcript ACA1_163790A; Oxidoreductase, 2OG-Fe(II) oxygenase family protein	complement(join(70415..70547,70612..70741,70832..70935,71022..71256,71326..71506,71599..71651,71717..71822,71895..72014))	Acanthamoeba castellanii str. Neff	14916256
ACA1_163800	CDS	ACA1_163800	NW_004457390.1	72353	73081	D	encoded by transcript ACA1_163800A; uncharacterized protein	join(72353..72595,72684..72761,72847..73006,73068..73081)	Acanthamoeba castellanii str. Neff	14916257
ACA1_163810	CDS	ACA1_163810	NW_004457390.1	73192	73611	R	encoded by transcript ACA1_163810A; uncharacterized protein	complement(join(<73192..73250,73314..73419,73492..73611))	Acanthamoeba castellanii str. Neff	14916258
ACA1_163820	CDS	ACA1_163820	NW_004457390.1	74283	76885	R	encoded by transcript ACA1_163820A; transporter, major facilitator subfamily protein	complement(join(74283..74629,74699..74857,74961..75026,75181..75445,75529..75765,75835..75983,76080..76296,76590..76646,76772..76885))	Acanthamoeba castellanii str. Neff	14916259
ACA1_163830	CDS	ACA1_163830	NW_004457390.1	79403	86400	D	encoded by transcript ACA1_163830A; C5 cytosine-specific DNA methylase superfamily protein	join(79403..79522,79596..79673,79759..79918,79999..80172,80257..80800,80905..81025,81108..81241,81321..81459,81542..81622,81715..81877,81979..82046,82083..82816,82905..83010,83126..83296,83362..83513,83613..83675,83754..83886,83975..84086,84166..84250,84335..84494,84594..84702,84794..84921,85029..85335,85454..85613,85702..85805,85908..86117,86228..86400)	Acanthamoeba castellanii str. Neff	14916260
ACA1_163840	CDS	ACA1_163840	NW_004457390.1	86937	89534	D	encoded by transcript ACA1_163840A; Ras family protein	join(86937..86970,87084..87114,87223..87388,87556..87891,87951..88025,88149..88314,88456..88539,88648..88905,89011..89105,89181..89332,89429..89534)	Acanthamoeba castellanii str. Neff	14916261
ACA1_163850	CDS	ACA1_163850	NW_004457390.1	89699	91658	R	encoded by transcript ACA1_163850A; TBC domain containing protein	complement(join(89699..89908,90038..90111,90183..90279,90510..90549,90560..90585,90687..90801,90902..91035,91131..91205,91500..91658))	Acanthamoeba castellanii str. Neff	14916144
ACA1_163860	CDS	ACA1_163860	NW_004457390.1	92850	95346	R	encoded by transcript ACA1_163860A; formate-tetrahydrofolate ligase	complement(join(92850..92923,93026..93144,93225..93333,93450..93833,93907..94665,94739..95015,95173..95346))	Acanthamoeba castellanii str. Neff	14916145
ACA1_163870	CDS	ACA1_163870	NW_004457390.1	95927	96442	D	encoded by transcript ACA1_163870A; uncharacterized protein	join(95927..96026,96126..96442)	Acanthamoeba castellanii str. Neff	14916146
ACA1_163890	CDS	ACA1_163890	NW_004457390.1	105707	108038	R	encoded by transcript ACA1_163890A; uncharacterized protein	complement(join(105707..105811,105900..106029,106146..106373,106471..107254,107409..107474,107562..107666,107765..108038))	Acanthamoeba castellanii str. Neff	14916148
ACA1_163900	CDS	ACA1_163900	NW_004457390.1	108279	109057	D	encoded by transcript ACA1_163900A; P18, putative	join(108279..108335,108434..108543,108673..108780,108928..109057)	Acanthamoeba castellanii str. Neff	14916149
ACA1_163910	CDS	ACA1_163910	NW_004457390.1	109255	111526	D	encoded by transcript ACA1_163910A; kelch domain containing 1, putative	join(109255..109447,109518..109556,109654..109767,109868..109932,110050..110230,110345..110484,110570..110599,110688..110832,110914..111001,111085..111290,111375..111526)	Acanthamoeba castellanii str. Neff	14916150
ACA1_163920	CDS	ACA1_163920	NW_004457390.1	111600	114874	R	encoded by transcript ACA1_163920A; uncharacterized protein	complement(join(111600..111764,111870..111951,112100..112221,112330..112515,112604..112717,112817..112988,113101..113274,113331..113384,113463..114559,114620..114727,114842..>114874))	Acanthamoeba castellanii str. Neff	14916151
ACA1_163930	CDS	ACA1_163930	NW_004457390.1	115190	116990	D	encoded by transcript ACA1_163930A; zinc carboxypeptidase superfamily protein	join(115190..115700,115772..115954,116011..116332,116450..116990)	Acanthamoeba castellanii str. Neff	14916152
ACA1_163940	CDS	ACA1_163940	NW_004457390.1	117245	118403	D	encoded by transcript ACA1_163940A; uncharacterized protein	join(117245..117963,118031..118153,118226..118297,118370..118403)	Acanthamoeba castellanii str. Neff	14916153
ACA1_163950	CDS	ACA1_163950	NW_004457390.1	118867	119241	R	encoded by transcript ACA1_163950A; uncharacterized protein	complement(118867..119241)	Acanthamoeba castellanii str. Neff	14916154
ACA1_163960	CDS	ACA1_163960	NW_004457390.1	119444	119713	R	encoded by transcript ACA1_163960A; uncharacterized protein	complement(119444..119713)	Acanthamoeba castellanii str. Neff	14916155
ACA1_163970	CDS	ACA1_163970	NW_004457390.1	119982	123264	D	encoded by transcript ACA1_163970A; RhoGEF domain containing protein	join(119982..120063,120208..120296,120382..120453,120569..120685,120780..120881,120997..121092,121155..121229,121363..121452,121602..121818,121936..122021,122084..122156,122236..122946,123041..123264)	Acanthamoeba castellanii str. Neff	14916156
ACA1_163980	CDS	ACA1_163980	NW_004457390.1	123512	124269	R	encoded by transcript ACA1_163980A; uncharacterized protein	complement(join(123512..123981,124059..124269))	Acanthamoeba castellanii str. Neff	14916157
ACA1_163990	CDS	ACA1_163990	NW_004457390.1	124662	127424	R	encoded by transcript ACA1_163990A; glycosyl hydrolases family 32 superfamily protein	complement(join(124662..125047,125107..125328,125429..125559,125649..125725,125923..126110,126220..126378,126453..126499,126572..126722,126834..126982,127048..127198,127313..127424))	Acanthamoeba castellanii str. Neff	14916158
ACA1_164000	CDS	ACA1_164000	NW_004457390.1	127844	130462	R	encoded by transcript ACA1_164000A; MIZ/SPRING zinc finger domain containing protein	complement(join(127844..128289,128356..128476,128575..128646,128723..128893,128964..129131,129223..129383,129479..129687,129802..129930,130107..130462))	Acanthamoeba castellanii str. Neff	14916181
ACA1_164010	CDS	ACA1_164010	NW_004457390.1	131012	134817	R	encoded by transcript ACA1_164010A; haloacid dehalogenase family hydrolase family protein	complement(join(131012..131207,131307..131400,131472..131643,131731..131841,131908..132008,132116..132308,132373..132518,132617..132745,132847..132964,133081..133145,133242..133461,133584..133712,133807..133890,133986..134049,134171..134290,134399..134544,134603..134676,134784..134817))	Acanthamoeba castellanii str. Neff	14916182
ACA1_164020	CDS	ACA1_164020	NW_004457390.1	134891	139759	R	encoded by transcript ACA1_164020A; uncharacterized protein	complement(join(134891..135020,135118..135224,135364..135523,135619..135687,135766..135863,135950..136057,136255..136441,136536..136641,136737..136782,136886..136975,137137..137254,137327..137673,137755..137825,137903..137972,138048..138188,138279..138373,138470..138578,138613..138690,138806..138876,138997..139093,139211..139267,139340..139759))	Acanthamoeba castellanii str. Neff	14916183
ACA1_164030	CDS	ACA1_164030	NW_004457390.1	140380	144430	D	encoded by transcript ACA1_164030A; Ankyrin repeatcontaining protein	join(140380..141093,141114..141560,141575..142118,142215..142721,142845..143116,143240..143403,143542..143654,143733..143851,143956..144090,144212..144430)	Acanthamoeba castellanii str. Neff	14916184
ACA1_164040	CDS	ACA1_164040	NW_004457390.1	144582	146689	R	encoded by transcript ACA1_164040A; signal peptide binding domain containing protein	complement(join(144582..144713,144832..144998,145092..145224,145298..145458,145532..145632,145725..145873,145972..146388,146459..146689))	Acanthamoeba castellanii str. Neff	14916185
ACA1_164050	CDS	ACA1_164050	NW_004457390.1	146946	149286	R	encoded by transcript ACA1_164050A; Antiquitin, putative	complement(join(146946..147222,147302..147399,147485..147740,147775..147800,147898..147992,148073..148381,148457..148543,148656..148860,148969..149286))	Acanthamoeba castellanii str. Neff	14916186
ACA1_164060	CDS	ACA1_164060	NW_004457390.1	149665	151153	R	encoded by transcript ACA1_164060A; uncharacterized protein	complement(join(149665..149799,149922..150061,150178..150267,150374..150419,150500..150642,150742..151153))	Acanthamoeba castellanii str. Neff	14916187
ACA1_164070	CDS	ACA1_164070	NW_004457390.1	151553	153544	D	encoded by transcript ACA1_164070A; F-box domain containing protein	join(151553..151883,151957..152408,152480..152607,152682..152783,152875..153265,153407..153544)	Acanthamoeba castellanii str. Neff	14916188
ACA1_164080	CDS	ACA1_164080	NW_004457390.1	153689	157067	R	encoded by transcript ACA1_164080A; SGT1 protein	complement(join(153689..153857,153953..154122,154190..154591,154684..154774,154861..155063,155146..155217,155312..155380,155456..155602,155686..155830,155910..155996,156071..156120,156190..156318,156389..156476,156543..156660,156769..156885,156953..157067))	Acanthamoeba castellanii str. Neff	14916189
ACA1_164090	CDS	ACA1_164090	NW_004457390.1	157712	161261	D	encoded by transcript ACA1_164090A; uncharacterized protein	join(157712..157937,158024..158833,158903..159478,159552..159676,159744..160306,160382..160526,160602..161261)	Acanthamoeba castellanii str. Neff	14916190
ACA1_164100	CDS	ACA1_164100	NW_004457390.1	161394	164122	R	encoded by transcript ACA1_164100A; 3oxoacid CoA transferase 1 isoform 3, putative	complement(join(161394..161528,161612..161692,161804..161890,161963..162038,162166..162287,162394..162501,162624..162728,162800..162968,163102..163274,163385..163468,163557..163649,163746..163890,163989..164122))	Acanthamoeba castellanii str. Neff	14916191
ACA1_164110	CDS	ACA1_164110	NW_004457390.1	164757	165134	D	encoded by transcript ACA1_164110A; uncharacterized protein	164757..165134	Acanthamoeba castellanii str. Neff	14916192
ACA1_164120	CDS	ACA1_164120	NW_004457390.1	165367	169207	D	encoded by transcript ACA1_164120A; mitochondrial helicase twinkle, putative	join(165367..165901,166009..166172,166279..166374,166483..166604,166726..166879,166971..167047,167173..167259,167339..167414,167512..167671,167788..167883,167978..168052,168150..168342,168537..168721,168839..168938,169027..169207)	Acanthamoeba castellanii str. Neff	14916193
ACA1_164130	CDS	ACA1_164130	NW_004457390.1	169360	170163	D	encoded by transcript ACA1_164130A; uncharacterized protein	169360..170163	Acanthamoeba castellanii str. Neff	14916159
ACA1_164140	CDS	ACA1_164140	NW_004457390.1	170529	170979	R	encoded by transcript ACA1_164140A; uncharacterized protein	complement(join(170529..170894,170971..170979))	Acanthamoeba castellanii str. Neff	14916160
ACA1_164150	CDS	ACA1_164150	NW_004457390.1	171289	174407	R	encoded by transcript ACA1_164150A; alpha/beta hydrolase fold domain containing protein	complement(join(171289..171866,171958..172640,172742..173316,173431..173588,173671..173921,173993..174059,174176..174407))	Acanthamoeba castellanii str. Neff	14916161
ACA1_164160	CDS	ACA1_164160	NW_004457390.1	174819	177287	R	encoded by transcript ACA1_164160A; peptidase, M50 domain containing protein	complement(join(174819..175032,175143..175218,175307..175426,175534..175787,175835..176028,176113..176222,176309..176436,176541..176644,176720..176837,176954..177086,177197..177287))	Acanthamoeba castellanii str. Neff	14916162
ACA1_164170	CDS	ACA1_164170	NW_004457390.1	177435	179377	R	encoded by transcript ACA1_164170A; rieske [2fe2s] domain containing protein	complement(join(177435..177495,177566..177697,177823..177952,178023..178148,178233..178344,178410..178542,178618..178665,178744..178803,178891..179018,179032..179065,179118..179377))	Acanthamoeba castellanii str. Neff	14916163
ACA1_164180	CDS	ACA1_164180	NW_004457390.1	180222	184100	D	encoded by transcript ACA1_164180A; Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase	join(180222..180252,180341..180435,180507..180617,180857..180957,181038..181126,181221..181377,181389..182337,182427..184100)	Acanthamoeba castellanii str. Neff	14916164
ACA1_164190	CDS	ACA1_164190	NW_004457390.1	184367	187400	R	encoded by transcript ACA1_164190A; SH3 domain containing protein	complement(join(184367..185497,185652..185751,185861..185939,186114..186308,186375..186468,186546..186731,186807..186918,186971..187054,187067..187167,187212..187400))	Acanthamoeba castellanii str. Neff	14916165
ACA1_164200	CDS	ACA1_164200	NW_004457390.1	187957	189761	D	encoded by transcript ACA1_164200A; regulator of chromosome condensation (RCC1) repeat domain containing protein	join(187957..188226,188287..188369,188430..188536,188660..188772,188831..188909,189073..189288,189357..189550,189633..189761)	Acanthamoeba castellanii str. Neff	14916166
ACA1_164210	CDS	ACA1_164210	NW_004457390.1	190914	196265	D	encoded by transcript ACA1_164210A; uncharacterized protein	join(190914..191022,191103..191303,191405..191769,191839..191926,192014..192128,192381..192431,192535..192810,192899..193057,193164..193248,193356..193466,193580..194386,194414..195785,195957..196039,196116..196265)	Acanthamoeba castellanii str. Neff	14916167
ACA1_164330	CDS	ACA1_164330	NW_004457390.1	209428	211009	R	encoded by transcript ACA1_164330A; Dehydrogenase/reductase SDR family protein 7like, putative	complement(join(209428..209563,209652..209763,209873..210027,210125..210219,210342..210417,210516..210571,210681..210754,210868..211009))	Acanthamoeba castellanii str. Neff	14916169
ACA1_164340	CDS	ACA1_164340	NW_004457390.1	211071	212898	D	encoded by transcript ACA1_164340A; oxidoreductase, 2OG-Fe(II) oxygenase family protein	join(211071..211171,211313..211355,211386..211472,211662..211725,211791..211901,211970..212035,212105..212158,212221..212276,212363..212431,212569..212656,212732..212898)	Acanthamoeba castellanii str. Neff	14916170
ACA1_164350	CDS	ACA1_164350	NW_004457390.1	213145	214341	D	encoded by transcript ACA1_164350A; uncharacterized protein	join(213145..213178,213338..214341)	Acanthamoeba castellanii str. Neff	14916171
ACA1_164360	CDS	ACA1_164360	NW_004457390.1	215008	215935	D	encoded by transcript ACA1_164360A; uncharacterized protein	join(215008..215766,215852..215935)	Acanthamoeba castellanii str. Neff	14916172
ACA1_164370	CDS	ACA1_164370	NW_004457390.1	216293	219164	D	encoded by transcript ACA1_164370A; zinc finger domain containing protein	join(216293..216381,216476..216589,216763..217230,217316..217447,217527..217819,217961..218072,218189..218334,218513..218613,218750..218833,218943..219164)	Acanthamoeba castellanii str. Neff	14916173
ACA1_164380	CDS	ACA1_164380	NW_004457390.1	219760	225326	D	encoded by transcript ACA1_164380A; protein kinase domain containing protein	join(219760..221261,221362..222670,222765..225326)	Acanthamoeba castellanii str. Neff	14916174
ACA1_164390	CDS	ACA1_164390	NW_004457390.1	225428	227148	R	encoded by transcript ACA1_164390A; carboxylesterase superfamily protein	complement(join(225428..226585,226684..227148))	Acanthamoeba castellanii str. Neff	14916194
ACA1_164500	CDS	ACA1_164500	NW_004457390.1	228952	232389	D	encoded by transcript ACA1_164500A; variant sh3 domain containing protein	join(228952..228969,229161..229331,229529..229601,229701..229772,229856..230142,230235..230592,230722..230915,231000..231210,231285..231445,231529..231875,231910..232084,232210..232389)	Acanthamoeba castellanii str. Neff	14916195
ACA1_164510	CDS	ACA1_164510	NW_004457390.1	232844	235838	D	encoded by transcript ACA1_164510A; leucine rich repeat domain containing protein	join(232844..233223,233320..233368,233451..233563,233661..233832,233950..234066,234224..234382,234470..234675,234821..234870,234940..235028,235123..235220,235324..235528,235587..235838)	Acanthamoeba castellanii str. Neff	14916196
ACA1_164520	CDS	ACA1_164520	NW_004457390.1	235940	236354	R	encoded by transcript ACA1_164520A; uncharacterized protein	complement(join(235940..235984,236056..236207,236294..236354))	Acanthamoeba castellanii str. Neff	14916197
ACA1_164530	CDS	ACA1_164530	NW_004457390.1	236550	236667	R	encoded by transcript ACA1_164530A; uncharacterized protein	complement(join(236550..236596,236625..236667))	Acanthamoeba castellanii str. Neff	14916198
ACA1_164640	CDS	ACA1_164640	NW_004457390.1	238263	239303	D	encoded by transcript ACA1_164640A; uncharacterized protein	join(238263..238465,238532..238622,238760..238867,238921..238935,239008..239161,239236..239303)	Acanthamoeba castellanii str. Neff	14916199
ACA1_164650	CDS	ACA1_164650	NW_004457390.1	240147	243937	D	encoded by transcript ACA1_164650A; ATPdependent DNA helicase, RecQ subfamily protein	join(240147..240650,240722..240782,240865..241030,241189..241250,241622..241710,241771..241821,241902..242039,242143..242349,242442..242723,242802..242881,242948..243089,243173..243296,243392..243505,243567..243685,243755..243937)	Acanthamoeba castellanii str. Neff	14916200
ACA1_164660	CDS	ACA1_164660	NW_004457390.1	244518	245871	R	encoded by transcript ACA1_164660A; protein tyrosine phosphatase, dual specificity, putative	complement(join(244518..244620,244692..244788,244868..245014,245088..245233,245329..245424,245534..245671,245741..245871))	Acanthamoeba castellanii str. Neff	14916201
ACA1_164670	CDS	ACA1_164670	NW_004457390.1	246508	247095	D	encoded by transcript ACA1_164670A; uncharacterized protein	246508..247095	Acanthamoeba castellanii str. Neff	14916202
ACA1_164680	CDS	ACA1_164680	NW_004457390.1	247492	248567	R	encoded by transcript ACA1_164680A; ankyrin repeat-containing protein	complement(join(247492..247701,247779..247877,247949..247960,248060..248155,248376..248567))	Acanthamoeba castellanii str. Neff	14916203
ACA1_164700	CDS	ACA1_164700	NW_004457390.1	253072	255738	D	encoded by transcript ACA1_164700A; GMPS family protein	join(253072..253636,253743..254134,254244..254486,254562..254697,254788..254972,255064..255248,255311..255482,255547..255738)	Acanthamoeba castellanii str. Neff	14916205
ACA1_164710	CDS	ACA1_164710	NW_004457390.1	257216	258001	R	encoded by transcript ACA1_164710A; ribosomal protein L23, putative	complement(join(257216..257838,257992..258001))	Acanthamoeba castellanii str. Neff	14916206
ACA1_164720	CDS	ACA1_164720	NW_004457390.1	258383	261880	D	encoded by transcript ACA1_164720A; autophagy protein 9, putative	join(258383..258433,258519..258583,258664..258777,258843..259081,259181..259355,259412..259490,259610..259692,259765..259879,259974..260146,260293..260381,260463..260551,260661..260769,260853..260903,260997..261253,261362..261463,261537..261710,261776..261880)	Acanthamoeba castellanii str. Neff	14916207
ACA1_164730	CDS	ACA1_164730	NW_004457390.1	262129	263344	D	encoded by transcript ACA1_164730A; methyltransferase type 11, putative	join(262129..262220,262293..262398,262512..262715,262792..262890,262983..263107,263179..263344)	Acanthamoeba castellanii str. Neff	14916208
ACA1_164740	CDS	ACA1_164740	NW_004457390.1	263480	264409	R	encoded by transcript ACA1_164740A; uncharacterized protein	complement(263480..264409)	Acanthamoeba castellanii str. Neff	14916209
ACA1_164750	CDS	ACA1_164750	NW_004457390.1	264624	266036	R	encoded by transcript ACA1_164750A; carbonate dehydratase	complement(join(264624..264700,264798..264917,264977..265077,265161..265255,265347..265441,265518..265699,265772..265837,265906..266036))	Acanthamoeba castellanii str. Neff	14916210
ACA1_164760	CDS	ACA1_164760	NW_004457390.1	267247	269223	D	encoded by transcript ACA1_164760A; uncharacterized protein	join(267247..267583,267654..268473,268559..268604,268670..268735,268825..269004,269068..269223)	Acanthamoeba castellanii str. Neff	14916211
ACA1_164770	CDS	ACA1_164770	NW_004457390.1	269656	271982	D	encoded by transcript ACA1_164770A; fungal Zn(2)-Cys(6) binuclear cluster domain containing protein	join(269656..269729,269887..270026,270118..270808,270890..271001,271086..271268,271356..271982)	Acanthamoeba castellanii str. Neff	14916212
ACA1_164780	CDS	ACA1_164780	NW_004457390.1	272891	284403	D	encoded by transcript ACA1_164780A; ubiquitin domain containing protein	join(272891..273027,273141..273187,273330..273448,273574..273651,273733..273882,273996..274194,274295..274449,274527..274872,274959..275059,275155..275386,275490..275608,275692..275850,275922..276032,276141..276422,276492..276653,276730..277075,277202..277599,277685..277859,277968..278110,278148..278307,278396..278503,278587..278819,278895..279137,279245..279361,279461..279567,279669..279804,279883..279946,280042..280194,280288..280409,280493..280840,280970..281263,281366..281594,281690..282212,282341..282494,282603..282953,283045..283386,283465..283683,283775..283966,284047..284122,284186..284403)	Acanthamoeba castellanii str. Neff	14916213
ACA1_164790	CDS	ACA1_164790	NW_004457390.1	284666	285771	D	encoded by transcript ACA1_164790A; ras-related protein Rab-2A, putative	join(284666..284759,284880..284939,285015..285094,285219..285301,285386..285590,285691..285771)	Acanthamoeba castellanii str. Neff	14916214
ACA1_164800	CDS	ACA1_164800	NW_004457390.1	288102	288855	R	encoded by transcript ACA1_164800A; uncharacterized protein	complement(join(288102..288215,288317..288734,288821..288855))	Acanthamoeba castellanii str. Neff	14916215
ACA1_164810	CDS	ACA1_164810	NW_004457390.1	289911	291753	D	encoded by transcript ACA1_164810A; uncharacterized protein	join(289911..290034,290109..290990,291081..291544,291625..291753)	Acanthamoeba castellanii str. Neff	14916216
ACA1_164820	CDS	ACA1_164820	NW_004457390.1	291993	292324	R	encoded by transcript ACA1_164820A; uncharacterized protein	complement(join(291993..292186,292249..292324))	Acanthamoeba castellanii str. Neff	14916217
ACA1_164840	CDS	ACA1_164840	NW_004457390.1	296514	298694	R	encoded by transcript ACA1_164840A; uncharacterized protein	complement(join(296514..296681,296776..296852,296930..297057,297220..297389,297456..297756,297879..298065,298194..298334,298436..298475,298590..298694))	Acanthamoeba castellanii str. Neff	14916219
ACA1_164850	CDS	ACA1_164850	NW_004457390.1	298823	299865	D	encoded by transcript ACA1_164850A; cytidine and deoxycytidylate deaminase zincbinding region domain containing protein	join(298823..298906,298974..299150,299243..299339,299462..299716,299786..299865)	Acanthamoeba castellanii str. Neff	14916220
ACA1_164860	CDS	ACA1_164860	NW_004457390.1	299911	300822	R	encoded by transcript ACA1_164860A; Ras subfamily protein	complement(join(299911..300223,300343..300422,300509..300556,300632..300704,300791..300822))	Acanthamoeba castellanii str. Neff	14916221
ACA1_164870	CDS	ACA1_164870	NW_004457390.1	301236	302660	R	encoded by transcript ACA1_164870A; uncharacterized protein	complement(join(301236..301418,301516..301651,301766..301920,302224..302301,302373..302497,302564..302660))	Acanthamoeba castellanii str. Neff	14916222
ACA1_164880	CDS	ACA1_164880	NW_004457390.1	302773	303482	R	encoded by transcript ACA1_164880A; alkB alkylation repair protein, putative	complement(join(302773..302978,303065..303194,303263..303411,303476..303482))	Acanthamoeba castellanii str. Neff	14916223
ACA1_164890	CDS	ACA1_164890	NW_004457390.1	303975	304556	R	encoded by transcript ACA1_164890A; acetyltransferase, GNAT superfamily protein	complement(303975..304556)	Acanthamoeba castellanii str. Neff	14916224
ACA1_164900	CDS	ACA1_164900	NW_004457390.1	304679	307985	R	encoded by transcript ACA1_164900A; bromodomain domain containing protein	complement(join(304679..304911,305008..305191,305286..306189,306299..306381,306460..306601,306712..307985))	Acanthamoeba castellanii str. Neff	14916225
ACA1_164910	CDS	ACA1_164910	NW_004457390.1	308637	311184	R	encoded by transcript ACA1_164910A; uncharacterized protein	complement(join(308637..308734,308818..308905,308977..309023,309118..309590,309662..309861,309965..310377,310445..310487,310556..310627,310735..311184))	Acanthamoeba castellanii str. Neff	14916226
ACA1_164920	CDS	ACA1_164920	NW_004457390.1	311647	312564	R	encoded by transcript ACA1_164920A; DJ1 family protein	complement(join(311647..311774,311846..311932,312120..312227,312292..312405,312468..312564))	Acanthamoeba castellanii str. Neff	14916243
ACA1_164930	CDS	ACA1_164930	NW_004457390.1	312672	314519	R	encoded by transcript ACA1_164930A; SKIP/SNW subfamily protein	complement(312672..314519)	Acanthamoeba castellanii str. Neff	14916244
ACA1_164940	CDS	ACA1_164940	NW_004457390.1	314796	317282	R	encoded by transcript ACA1_164940A; glutathione synthetase	complement(join(314796..314925,315022..315149,315260..315315,315414..315543,315623..315721,315796..315910,316034..316165,316264..316364,316544..316690,316781..316856,316926..317008,317066..317082,317171..317282))	Acanthamoeba castellanii str. Neff	14916245
ACA1_164950	CDS	ACA1_164950	NW_004457390.1	317494	318711	R	encoded by transcript ACA1_164950A; uncharacterized protein	complement(317494..318711)	Acanthamoeba castellanii str. Neff	14916246
ACA1_164960	CDS	ACA1_164960	NW_004457390.1	319256	320142	R	encoded by transcript ACA1_164960A; OBfold nucleic acid binding domain containing protein	complement(join(319256..319368,319448..319523,319581..319663,319737..319855,319894..319910,319945..320142))	Acanthamoeba castellanii str. Neff	14916247
ACA1_164970	CDS	ACA1_164970	NW_004457390.1	320261	320530	R	encoded by transcript ACA1_164970A; uncharacterized protein	complement(join(320261..320298,320365..320530))	Acanthamoeba castellanii str. Neff	14916248
ACA1_164980	CDS	ACA1_164980	NW_004457390.1	320814	322904	D	encoded by transcript ACA1_164980A; uncharacterized protein	join(320814..320879,320966..321254,321352..321545,321629..321709,321858..321941,322037..322269,322346..322591,322709..>322904)	Acanthamoeba castellanii str. Neff	14916249
ACA1_067270	CDS	ACA1_067270	NW_004457389.1	1720	2843	D	encoded by transcript ACA1_067270A; uncharacterized protein	join(1720..1803,1867..1935,1994..2101,2205..2302,2384..2430,2572..2702,2780..>2843)	Acanthamoeba castellanii str. Neff	14916131
ACA1_067380	CDS	ACA1_067380	NW_004457389.1	4865	6272	R	encoded by transcript ACA1_067380A; uncharacterized protein	complement(join(4865..5061,5141..5398,5441..5739,5817..5951,6094..6272))	Acanthamoeba castellanii str. Neff	14916143
ACA1_067390	CDS	ACA1_067390	NW_004457389.1	6797	13957	R	encoded by transcript ACA1_067390A; SNF2 domain containing protein	complement(join(6797..6991,7105..7206,7284..7405,7516..7688,7860..7930,8038..8274,8339..8486,8588..8709,8881..8961,9064..9132,9227..9359,9464..9673,9754..9848,9985..10053,10274..10375,10484..10591,10711..10791,10885..11019,11114..11258,11354..11465,11550..11643,11791..11905,12021..12251,12337..12398,12480..12523,12628..12798,12879..12999,13190..13957))	Acanthamoeba castellanii str. Neff	14916132
ACA1_067400	CDS	ACA1_067400	NW_004457389.1	14195	16434	D	encoded by transcript ACA1_067400A; NAD dependent epimerase/dehydratase superfamily protein	join(14195..14227,14300..14434,14570..14720,14885..15086,15204..15398,15547..15697,15800..15929,16053..16183,16318..16434)	Acanthamoeba castellanii str. Neff	14916135
ACA1_067410	CDS	ACA1_067410	NW_004457389.1	16540	20473	R	encoded by transcript ACA1_067410A; Fbox domain containing protein	complement(join(16540..16872,16983..17458,17542..17627,17717..17806,17956..18019,18107..18317,18410..18534,18602..18702,18805..18907,18981..19084,19190..19296,19383..19463,19554..19699,19790..19887,20016..20097,20178..20340,20438..20473))	Acanthamoeba castellanii str. Neff	14916133
ACA1_067420	CDS	ACA1_067420	NW_004457389.1	20727	21222	D	encoded by transcript ACA1_067420A; Hypothetical protein	join(20727..20781,20873..21045,21133..21222)	Acanthamoeba castellanii str. Neff	14916134
ACA1_067430	CDS	ACA1_067430	NW_004457389.1	21300	23484	R	encoded by transcript ACA1_067430A; bifunctional protein FolC subfamily protein	complement(join(21300..22180,22259..22322,22424..22501,22575..22736,22796..22873,22964..23054,23158..23294,23377..23484))	Acanthamoeba castellanii str. Neff	14916141
ACA1_067440	CDS	ACA1_067440	NW_004457389.1	23882	29967	R	encoded by transcript ACA1_067440A; Bromodomain containing protein	complement(join(23882..24130,24216..25336,25400..25523,25601..26122,26211..26615,26677..26757,26843..26939,27022..27256,27325..27416,27484..27613,27687..27771,27852..27938,28017..28141,28229..28391,28473..28663,29034..29185,29281..29540,29606..29680,29749..29823,29905..29967))	Acanthamoeba castellanii str. Neff	14916142
ACA1_067450	CDS	ACA1_067450	NW_004457389.1	32369	33406	R	encoded by transcript ACA1_067450A; uncharacterized protein	complement(join(32369..32493,32567..32647,32709..32883,32964..33058,33127..33406))	Acanthamoeba castellanii str. Neff	14916136
ACA1_067460	CDS	ACA1_067460	NW_004457389.1	33557	34671	R	encoded by transcript ACA1_067460A; Fbox domain containing protein	complement(join(33557..33815,33894..34063,34200..34270,34383..34671))	Acanthamoeba castellanii str. Neff	14916137
ACA1_067470	CDS	ACA1_067470	NW_004457389.1	34803	35086	R	encoded by transcript ACA1_067470A; uncharacterized protein	complement(join(34803..34845,34914..35086))	Acanthamoeba castellanii str. Neff	14916138
ACA1_067480	CDS	ACA1_067480	NW_004457389.1	35708	38014	D	encoded by transcript ACA1_067480A; RasGEF domain containing protein	join(35708..35859,35887..36241,36377..36519,36583..36639,36714..36897,36971..37219,37294..37383,37548..37680,37760..>38014)	Acanthamoeba castellanii str. Neff	14916139
ACA1_067590	CDS	ACA1_067590	NW_004457389.1	39561	40888	D	encoded by transcript ACA1_067590A; folylpolyglutamate synthase, putative	join(39561..39695,39757..39895,39998..40106,40140..40269,40328..40405,40451..40660,40730..40888)	Acanthamoeba castellanii str. Neff	14916140
ACA1_000530	CDS	ACA1_000530	NW_004457387.1	63	2749	D	encoded by transcript ACA1_000530A; pentatricopeptide repeat domain containing protein	join(63..452,537..627,696..797,908..1506,1638..2168,2241..2403,2480..2589,2693..2749)	Acanthamoeba castellanii str. Neff	14916126
ACA1_000540	CDS	ACA1_000540	NW_004457387.1	2815	3261	D	encoded by transcript ACA1_000540A; uncharacterized protein	2815..3261	Acanthamoeba castellanii str. Neff	14916124
ACA1_000550	CDS	ACA1_000550	NW_004457387.1	3858	5040	D	encoded by transcript ACA1_000550A; eukaryotic translation initiation factor 4E family	join(3858..4094,4200..4334,4457..4841,4949..5040)	Acanthamoeba castellanii str. Neff	14916125
ACA1_000560	CDS	ACA1_000560	NW_004457387.1	5394	6239	D	encoded by transcript ACA1_000560A; uncharacterized protein	5394..6239	Acanthamoeba castellanii str. Neff	14916127
ACA1_000570	CDS	ACA1_000570	NW_004457387.1	6346	7444	D	encoded by transcript ACA1_000570A; K+ channel tetramerization subfamily protein	join(6346..6825,6946..7056,7121..7228,7327..7363,7389..7444)	Acanthamoeba castellanii str. Neff	14916128
ACA1_000580	CDS	ACA1_000580	NW_004457387.1	7505	9844	R	encoded by transcript ACA1_000580A; uncharacterized protein	complement(join(7505..7902,7989..8071,8156..8259,8350..8450,8553..8614,8772..8876,9026..9219,9326..9636,9820..9844))	Acanthamoeba castellanii str. Neff	14916129
ACA1_000590	CDS	ACA1_000590	NW_004457387.1	10533	13091	D	encoded by transcript ACA1_000590A; uncharacterized protein	join(10533..11358,11433..11557,11657..11711,11814..11968,12059..12192,12286..12407,12500..12596,12671..12817,12896..>13091)	Acanthamoeba castellanii str. Neff	14916130
ACA1_340040	CDS	ACA1_340040	NW_004457386.1	8	3394	R	encoded by transcript ACA1_340040A; zinc finger, zz type domain containing protein	complement(join(<8..844,911..1161,1460..1555,1627..1821,1896..2096,2608..2692,2798..2958,3043..3340,3374..3394))	Acanthamoeba castellanii str. Neff	14916102
ACA1_340350	CDS	ACA1_340350	NW_004457386.1	6473	8102	R	encoded by transcript ACA1_340350A; exocyst complex subunit Sec15like family protein	complement(join(6473..6629,6709..6781,6855..6921,7020..7169,7253..7372,7486..7591,7694..7769,7925..8102))	Acanthamoeba castellanii str. Neff	14916107
ACA1_340460	CDS	ACA1_340460	NW_004457386.1	9571	10708	R	encoded by transcript ACA1_340460A; N6 adenine-specific DNA methyltransferase 1, putative	complement(join(9571..9633,9730..9831,9956..10039,10127..10237,10310..10439,10542..10708))	Acanthamoeba castellanii str. Neff	14916108
ACA1_340470	CDS	ACA1_340470	NW_004457386.1	10822	11905	R	encoded by transcript ACA1_340470A; uncharacterized protein	complement(join(10822..11015,11230..11243,11360..11435,11587..11905))	Acanthamoeba castellanii str. Neff	14916109
ACA1_340680	CDS	ACA1_340680	NW_004457386.1	13929	14921	R	encoded by transcript ACA1_340680A; uncharacterized protein	complement(join(<13929..13981,14065..14275,14356..14430,14518..14621,14703..14786,14858..14921))	Acanthamoeba castellanii str. Neff	14916110
ACA1_340790	CDS	ACA1_340790	NW_004457386.1	16122	19929	D	encoded by transcript ACA1_340790A; Spc97 / Spc98 family protein	join(16122..16153,16269..16477,16639..17099,18245..18357,18435..18518,18632..18840,18912..19087,19180..19371,19480..19611,19744..19929)	Acanthamoeba castellanii str. Neff	14916111
ACA1_340900	CDS	ACA1_340900	NW_004457386.1	20155	21484	R	encoded by transcript ACA1_340900A; isopentenyldiphosphate delta-isomerase	complement(join(20155..20408,20481..20673,20773..20891,21018..21056,21148..21258,21466..21484))	Acanthamoeba castellanii str. Neff	14916112
ACA1_340910	CDS	ACA1_340910	NW_004457386.1	22085	27093	R	encoded by transcript ACA1_340910A; MutS domain V domain containing protein	complement(join(22085..22402,22496..22574,22674..22965,23112..23243,23327..23482,23576..23649,23741..23954,24084..24246,24387..24539,24624..24721,24833..25025,25111..25476,25570..25863,25989..26230,26329..26425,26512..27093))	Acanthamoeba castellanii str. Neff	14916113
ACA1_340920	CDS	ACA1_340920	NW_004457386.1	27752	37067	D	encoded by transcript ACA1_340920A; leucine rich repeat-containing protein	join(27752..27863,27958..28042,28055..28068,28183..28721,28949..29073,29085..29253,29404..29527,29719..29790,29877..30011,30086..30158,30229..30346,30463..30546,30635..30778,30866..31225,31316..31379,31456..31820,31880..31964,32032..32154,32245..32363,32455..32594,32682..32805,32886..33038,33138..33290,33376..33488,33559..33646,33728..34047,35858..37067)	Acanthamoeba castellanii str. Neff	14916114
ACA1_341030	CDS	ACA1_341030	NW_004457386.1	37426	39527	D	encoded by transcript ACA1_341030A; CRAL/TRIO domain containing protein	join(<37426..37569,37709..37853,37988..38157,38275..38415,38490..38575,38670..38752,38840..38954,39047..39156,39248..39363,39462..39527)	Acanthamoeba castellanii str. Neff	14916115
ACA1_341040	CDS	ACA1_341040	NW_004457386.1	39577	40002	R	encoded by transcript ACA1_341040A; uncharacterized protein	complement(39577..40002)	Acanthamoeba castellanii str. Neff	14916116
ACA1_341050	CDS	ACA1_341050	NW_004457386.1	40253	40600	D	encoded by transcript ACA1_341050A; CSL zinc finger domain containing protein	join(40253..40399,40460..40600)	Acanthamoeba castellanii str. Neff	14916117
ACA1_341060	CDS	ACA1_341060	NW_004457386.1	40788	44191	R	encoded by transcript ACA1_341060A; RhoGAP domain containing protein	complement(join(40788..41362,41441..41905,42061..42358,42459..42628,42705..42817,42950..43557,43710..43880,43997..44191))	Acanthamoeba castellanii str. Neff	14916118
ACA1_341070	CDS	ACA1_341070	NW_004457386.1	44504	45997	R	encoded by transcript ACA1_341070A; peroxisomal membrane 22 kDa family protein	complement(join(44504..44698,44812..44919,45013..45102,45182..45270,45349..45462,45683..45760,45925..>45997))	Acanthamoeba castellanii str. Neff	14916119
ACA1_341080	CDS	ACA1_341080	NW_004457386.1	46037	47297	D	encoded by transcript ACA1_341080A; uncharacterized protein	join(46037..46064,46191..46323,46439..46511,46582..46699,46786..47297)	Acanthamoeba castellanii str. Neff	14916120
ACA1_341090	CDS	ACA1_341090	NW_004457386.1	47503	49174	R	encoded by transcript ACA1_341090A; 26S protease regulatory subunit 6a, putative	complement(join(47503..47616,47703..48244,48330..48603,48684..48788,48899..49174))	Acanthamoeba castellanii str. Neff	14916121
ACA1_341100	CDS	ACA1_341100	NW_004457386.1	49487	51501	R	encoded by transcript ACA1_341100A; transporter, major facilitator superfamily superfamily protein	complement(join(49487..50207,50295..50410,50482..50566,50666..50745,50811..50938,51068..51173,51240..51340,51405..51501))	Acanthamoeba castellanii str. Neff	14916122
ACA1_341110	CDS	ACA1_341110	NW_004457386.1	51763	53951	R	encoded by transcript ACA1_341110A; protein phosphatase 2C domain containing protein	complement(join(51763..52090,52183..52301,52382..52479,52546..52700,52767..52949,53158..53296,53376..53533,53623..53951))	Acanthamoeba castellanii str. Neff	14916123
ACA1_341120	CDS	ACA1_341120	NW_004457386.1	54560	56788	R	encoded by transcript ACA1_341120A; Flavin-binding monooxygenase subfamily protein	complement(join(54560..54661,54740..54927,54995..55375,55463..55605,55681..55750,55827..55919,56009..56120,56164..56374,56565..56648,56727..56788))	Acanthamoeba castellanii str. Neff	14916103
ACA1_341230	CDS	ACA1_341230	NW_004457386.1	59976	60236	R	encoded by transcript ACA1_341230A; uncharacterized protein	complement(59976..60236)	Acanthamoeba castellanii str. Neff	14916104
ACA1_341340	CDS	ACA1_341340	NW_004457386.1	61064	62306	R	encoded by transcript ACA1_341340A; uncharacterized protein	complement(join(61064..61284,61401..61479,61803..62306))	Acanthamoeba castellanii str. Neff	14916105
ACA1_309300	CDS	ACA1_309300	NW_004457385.1	72	2167	D	encoded by transcript ACA1_309300A; pentatricopeptide repeat domain/PPR repeatcontaining protein	join(<72..514,626..727,819..937,1026..1744,1830..1963,2029..2167)	Acanthamoeba castellanii str. Neff	14916097
ACA1_309310	CDS	ACA1_309310	NW_004457385.1	2380	4042	D	encoded by transcript ACA1_309310A; uncharacterized protein	join(2380..2638,2721..2858,3100..3163,3263..3382,3458..3597,3679..3806,3884..4042)	Acanthamoeba castellanii str. Neff	14916098
ACA1_309320	CDS	ACA1_309320	NW_004457385.1	4140	5513	R	encoded by transcript ACA1_309320A; aldose 1epimerase family protein	complement(join(4140..4271,4364..4461,4528..4666,4764..4894,4962..5179,5267..5327,5399..5513))	Acanthamoeba castellanii str. Neff	14916100
ACA1_309330	CDS	ACA1_309330	NW_004457385.1	5582	6072	R	encoded by transcript ACA1_309330A; uncharacterized protein	complement(join(5582..5719,5782..6072))	Acanthamoeba castellanii str. Neff	14916101
ACA1_309340	CDS	ACA1_309340	NW_004457385.1	6116	7327	D	encoded by transcript ACA1_309340A; Protein tyrosine phosphataselike protein, PTPLA	join(6116..6222,6286..6371,6448..6495,6560..6648,6722..6843,6924..6970,7039..7170,7242..7327)	Acanthamoeba castellanii str. Neff	14916099
ACA1_309350	CDS	ACA1_309350	NW_004457385.1	8655	10547	D	encoded by transcript ACA1_309350A; cellulase (glycosyl hydrolase family 5) subfamily protein	join(8655..8918,9004..9171,9269..9574,9651..10547)	Acanthamoeba castellanii str. Neff	14916094
ACA1_309360	CDS	ACA1_309360	NW_004457385.1	10677	12955	R	encoded by transcript ACA1_309360A; uncharacterized protein	complement(join(10677..10897,10956..11456,11536..11635,11695..11816,11906..11988,12071..12173,12250..12370,12450..12512,12671..12807,12838..>12955))	Acanthamoeba castellanii str. Neff	14916095
ACA1_309370	CDS	ACA1_309370	NW_004457385.1	13465	14537	R	encoded by transcript ACA1_309370A; zinc finger, zz type domain containing protein	complement(join(13465..13856,13940..14065,14170..14297,14398..14537))	Acanthamoeba castellanii str. Neff	14916096
ACA1_275380	CDS	ACA1_275380	NW_004457384.1	158	1696	D	encoded by transcript ACA1_275380A; uncharacterized protein	join(158..443,530..616,735..841,940..1000,1074..1696)	Acanthamoeba castellanii str. Neff	14916007
ACA1_275390	CDS	ACA1_275390	NW_004457384.1	2200	4826	D	encoded by transcript ACA1_275390A; Major Vault Protein repeatcontaining protein	join(2200..2313,2586..4169,4200..4826)	Acanthamoeba castellanii str. Neff	14916008
ACA1_275400	CDS	ACA1_275400	NW_004457384.1	5299	11787	R	encoded by transcript ACA1_275400A; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain containing protein	complement(join(5299..5604,5676..5798,5915..5973,6053..6218,6347..6469,6544..6702,6802..6945,7074..7153,7249..7317,7374..7485,7572..7695,7796..7929,8049..8145,8238..8373,8471..8621,8763..8936,9086..9242,9317..9418,9465..9482,9589..9692,9766..9842,9929..10087,10172..10400,10495..10624,10710..10824,10916..11024,11145..11338,11420..11495,11677..11787))	Acanthamoeba castellanii str. Neff	14915999
ACA1_275410	CDS	ACA1_275410	NW_004457384.1	12036	14092	R	encoded by transcript ACA1_275410A; GTPaseactivating protein	complement(join(12036..12217,12332..12493,12603..12809,12911..13009,13188..13290,13373..13611,13732..13918,13994..14092))	Acanthamoeba castellanii str. Neff	14916000
ACA1_275420	CDS	ACA1_275420	NW_004457384.1	14295	15410	R	encoded by transcript ACA1_275420A; ENTH domain containing protein	complement(join(14295..14426,14546..14767,14854..15310,15340..15410))	Acanthamoeba castellanii str. Neff	14916001
ACA1_275430	CDS	ACA1_275430	NW_004457384.1	15560	18327	R	encoded by transcript ACA1_275430A; ENTH domain containing protein	complement(join(15560..15570,15800..15857,15949..16199,16308..16404,16506..16807,16904..17039,17150..17427,17534..17662,17855..17993,18119..18197,18296..18327))	Acanthamoeba castellanii str. Neff	14916035
ACA1_275440	CDS	ACA1_275440	NW_004457384.1	19049	20316	D	encoded by transcript ACA1_275440A; NAD dependent epimerase/dehydratase	join(19049..19168,19231..19283,19365..19557,19631..19735,19830..19976,20036..20143,20215..20316)	Acanthamoeba castellanii str. Neff	14916036
ACA1_275450	CDS	ACA1_275450	NW_004457384.1	20627	21349	R	encoded by transcript ACA1_275450A; HMG (high mobility group) box domain containing protein	complement(join(20627..21059,21118..21157,21241..21349))	Acanthamoeba castellanii str. Neff	14916037
ACA1_275460	CDS	ACA1_275460	NW_004457384.1	22014	23921	R	encoded by transcript ACA1_275460A; PHDfinger domain containing protein	complement(join(22014..22830,22924..23171,23287..23763,23862..23921))	Acanthamoeba castellanii str. Neff	14916038
ACA1_275470	CDS	ACA1_275470	NW_004457384.1	24914	25639	D	encoded by transcript ACA1_275470A; calmodulin 1 isoform 5, putative	join(24914..25017,25085..25188,25275..25392,25504..25639)	Acanthamoeba castellanii str. Neff	14916039
ACA1_275480	CDS	ACA1_275480	NW_004457384.1	25761	26518	R	encoded by transcript ACA1_275480A; Calciumbinding protein NCSA, putative	complement(join(25761..26032,26104..26340,26440..26518))	Acanthamoeba castellanii str. Neff	14916040
ACA1_275490	CDS	ACA1_275490	NW_004457384.1	26631	30498	D	encoded by transcript ACA1_275490A; uncharacterized protein	join(26631..26693,26782..26956,27006..27050,27121..27197,27320..27362,27385..27527,27628..27702,27800..27881,27948..28090,28184..28329,28457..28606,28750..28907,29005..29311,29409..29556,29639..29716,29758..30498)	Acanthamoeba castellanii str. Neff	14916041
ACA1_275500	CDS	ACA1_275500	NW_004457384.1	31055	33621	D	encoded by transcript ACA1_275500A; DEADbox ATP-dependent RNA helicase 31, putative	join(31055..31097,31215..31361,31465..31619,31739..31832,31935..32056,32196..32299,32454..32517,32651..32755,32865..32943,33027..33227,33344..33621)	Acanthamoeba castellanii str. Neff	14916026
ACA1_275510	CDS	ACA1_275510	NW_004457384.1	33690	35483	D	encoded by transcript ACA1_275510A; protein geranylgeranyltransferase type I, beta subunit, putative	join(33690..33975,34111..34196,34313..34500,34582..34675,34839..35001,35083..35214,35290..35483)	Acanthamoeba castellanii str. Neff	14916027
ACA1_275520	CDS	ACA1_275520	NW_004457384.1	35628	35830	R	encoded by transcript ACA1_275520A; uncharacterized protein	complement(join(35628..35660,35678..35830))	Acanthamoeba castellanii str. Neff	14916028
ACA1_275530	CDS	ACA1_275530	NW_004457384.1	37162	39562	R	encoded by transcript ACA1_275530A; uncharacterized protein	complement(join(37162..37277,37410..37461,37485..37597,37733..37858,37941..38023,38081..38178,38265..38414,38504..38615,38785..38980,39072..39168,39272..39562))	Acanthamoeba castellanii str. Neff	14916029
ACA1_275540	CDS	ACA1_275540	NW_004457384.1	39756	40846	R	encoded by transcript ACA1_275540A; SPRY domain containing protein	complement(join(39756..39909,40082..40320,40355..40595,40621..40710,40785..40846))	Acanthamoeba castellanii str. Neff	14916030
ACA1_275550	CDS	ACA1_275550	NW_004457384.1	40919	41144	R	encoded by transcript ACA1_275550A; uncharacterized protein	complement(join(40919..41082,41105..41144))	Acanthamoeba castellanii str. Neff	14916031
ACA1_275560	CDS	ACA1_275560	NW_004457384.1	41321	42927	R	encoded by transcript ACA1_275560A; uncharacterized protein	complement(join(41321..41641,41944..42055,42146..42341,42433..42529,42637..42927))	Acanthamoeba castellanii str. Neff	14916032
ACA1_275570	CDS	ACA1_275570	NW_004457384.1	43003	44849	R	encoded by transcript ACA1_275570A; uncharacterized protein	complement(join(43003..43370,43457..43520,43586..43650,43733..43873,43957..44084,44191..44316,44375..44441,44747..44849))	Acanthamoeba castellanii str. Neff	14916033
ACA1_275580	CDS	ACA1_275580	NW_004457384.1	45051	46905	D	encoded by transcript ACA1_275580A; uncharacterized protein	join(45051..45776,45923..46001,46105..46200,46337..46382,46515..46905)	Acanthamoeba castellanii str. Neff	14916034
ACA1_275590	CDS	ACA1_275590	NW_004457384.1	46991	48290	R	encoded by transcript ACA1_275590A; DUF1264 domain protein	complement(join(46991..47137,47234..47313,47372..47477,47562..47637,47778..47887,47980..48098,48227..48290))	Acanthamoeba castellanii str. Neff	14916070
ACA1_275600	CDS	ACA1_275600	NW_004457384.1	49260	50373	D	encoded by transcript ACA1_275600A; uncharacterized protein	join(49260..49591,49698..49944,50016..50134,50208..50373)	Acanthamoeba castellanii str. Neff	14916071
ACA1_275610	CDS	ACA1_275610	NW_004457384.1	51517	52888	R	encoded by transcript ACA1_275610A; uncharacterized protein	complement(join(51517..51565,51672..51923,52010..52095,52169..52414,52517..52888))	Acanthamoeba castellanii str. Neff	14916072
ACA1_275620	CDS	ACA1_275620	NW_004457384.1	54253	67900	R	encoded by transcript ACA1_275620A; uncharacterized protein	complement(join(54253..54623,54676..54683,54712..54820,54906..55587,55690..55961,56066..56267,56385..56744,56860..57165,57275..57475,57586..57759,57859..57972,58070..58333,58390..58650,58720..58942,59023..59225,59305..59581,59873..60045,60140..60260,60341..60786,60866..60922,60997..61252,61327..61511,61590..62306,62391..62616,62693..62805,62876..62956,63054..63267,63369..63638,63732..63859,63919..64017,64133..64315,64391..64487,64580..64746,64835..64996,65080..65164,65249..65370,65481..65683,65811..66000,66104..66291,66397..66500,66846..67018,67144..67584,67757..67900))	Acanthamoeba castellanii str. Neff	14916073
ACA1_275630	CDS	ACA1_275630	NW_004457384.1	68056	70301	R	encoded by transcript ACA1_275630A; adaptorrelated protein complex 1, mu 1 subunit isoform 10, putative	complement(join(68056..68122,68215..68332,68412..68511,68646..68762,68870..68941,69032..69098,69182..69263,69374..69503,69678..69798,69923..70121,70205..70301))	Acanthamoeba castellanii str. Neff	14916074
ACA1_275640	CDS	ACA1_275640	NW_004457384.1	70881	73113	R	encoded by transcript ACA1_275640A; hydroxymethylglutarylCoA reductase (NADPH), putative	complement(join(70881..70927,71021..71123,71261..71381,71495..71603,71691..71884,71977..72122,72221..72335,72426..72615,72740..72838,72951..73113))	Acanthamoeba castellanii str. Neff	14916075
ACA1_275650	CDS	ACA1_275650	NW_004457384.1	74267	76960	D	encoded by transcript ACA1_275650A; helicase associated domain containing protein	join(74267..74424,74580..74625,74770..74913,75031..75203,75313..75412,75492..75561,75664..76319,76404..76474,76564..76647,76804..76960)	Acanthamoeba castellanii str. Neff	14916076
ACA1_275660	CDS	ACA1_275660	NW_004457384.1	77089	81863	D	encoded by transcript ACA1_275660A; mannosyl-oligosaccharide alpha-1,2-mannosidase	join(77089..77818,77830..78591,79133..79485,79616..79759,79857..80032,80140..80357,80501..80646,80809..80886,81011..81110,81224..81307,81403..81604,81653..81863)	Acanthamoeba castellanii str. Neff	14916077
ACA1_275670	CDS	ACA1_275670	NW_004457384.1	81993	83347	R	encoded by transcript ACA1_275670A; uncharacterized protein	complement(join(81993..82349,82492..82815,82943..83104,83135..83347))	Acanthamoeba castellanii str. Neff	14916042
ACA1_275680	CDS	ACA1_275680	NW_004457384.1	83632	85516	R	encoded by transcript ACA1_275680A; uncharacterized protein	complement(join(83632..83781,83950..84153,84272..84338,84473..84638,84794..84891,84989..85036,85127..85268,85378..85516))	Acanthamoeba castellanii str. Neff	14916043
ACA1_275690	CDS	ACA1_275690	NW_004457384.1	85912	88681	D	encoded by transcript ACA1_275690A; uncharacterized protein	join(85912..86177,86275..87466,87494..87565,87632..88681)	Acanthamoeba castellanii str. Neff	14916044
ACA1_275700	CDS	ACA1_275700	NW_004457384.1	88874	89904	R	encoded by transcript ACA1_275700A; uncharacterized protein	complement(join(88874..88894,88982..89108,89225..89673,89773..89904))	Acanthamoeba castellanii str. Neff	14916045
ACA1_275710	CDS	ACA1_275710	NW_004457384.1	90011	91997	D	encoded by transcript ACA1_275710A; uncharacterized protein	join(90011..90098,90168..90293,90398..91027,91127..91244,91268..91343,91425..91997)	Acanthamoeba castellanii str. Neff	14916046
ACA1_275720	CDS	ACA1_275720	NW_004457384.1	92277	94014	D	encoded by transcript ACA1_275720A; Enolase, Cterminal TIM barrel domain containing protein	join(92277..92471,92606..92727,92793..93175,93262..93371,93448..93579,93649..94014)	Acanthamoeba castellanii str. Neff	14916047
ACA1_275730	CDS	ACA1_275730	NW_004457384.1	94176	95129	R	encoded by transcript ACA1_275730A; phosphoglycerate mutase family domain containing protein	complement(join(94176..94402,94479..94779,94856..94945,95037..95129))	Acanthamoeba castellanii str. Neff	14916048
ACA1_275740	CDS	ACA1_275740	NW_004457384.1	95983	97950	D	encoded by transcript ACA1_275740A; glycerol-3-phosphate dehydrogenase (soluble)	join(95983..96089,96162..96236,96319..96436,96560..96731,96769..96855,96952..97013,97076..97167,97236..97343,97413..97494,97575..97635,97753..97825,97878..97950)	Acanthamoeba castellanii str. Neff	14916049
ACA1_275750	CDS	ACA1_275750	NW_004457384.1	98205	100886	R	encoded by transcript ACA1_275750A; zinc finger, C3HC4 type (RING finger) domain containing protein	complement(join(98205..98245,98330..98538,98657..98713,98820..98875,98973..99069,99162..99228,99315..99791,99882..99935,100184..100258,100426..100613,100645..100886))	Acanthamoeba castellanii str. Neff	14916050
ACA1_275760	CDS	ACA1_275760	NW_004457384.1	102126	103566	R	encoded by transcript ACA1_275760A; uncharacterized protein	complement(join(102126..102904,103057..103140,103326..103566))	Acanthamoeba castellanii str. Neff	14916051
ACA1_275770	CDS	ACA1_275770	NW_004457384.1	103727	105717	R	encoded by transcript ACA1_275770A; Twinfilin, putative	complement(join(103727..103930,104071..104135,104278..104440,104508..104630,104777..104869,104939..105002,105130..105292,105430..105480,105547..105627,105693..105717))	Acanthamoeba castellanii str. Neff	14916052
ACA1_275780	CDS	ACA1_275780	NW_004457384.1	105864	106665	D	encoded by transcript ACA1_275780A; mitochondrial import inner membrane translocase subunit tim17 1, putative	join(105864..106254,106466..106665)	Acanthamoeba castellanii str. Neff	14916053
ACA1_275790	CDS	ACA1_275790	NW_004457384.1	106839	110613	R	encoded by transcript ACA1_275790A; RNA recognition motif domain containing protein	complement(join(106839..107465,107524..107813,107960..108229,108384..108595,108707..108807,108899..109296,109387..109479,109625..109697,109942..109983,110109..110202,110262..110374,110548..110613))	Acanthamoeba castellanii str. Neff	14916078
ACA1_275800	CDS	ACA1_275800	NW_004457384.1	110728	111375	R	encoded by transcript ACA1_275800A; uncharacterized protein	complement(join(110728..110811,110948..111030,111111..111213,111307..111375))	Acanthamoeba castellanii str. Neff	14916079
ACA1_275810	CDS	ACA1_275810	NW_004457384.1	111852	117260	R	encoded by transcript ACA1_275810A; uncharacterized protein	complement(join(111852..111893,112064..112211,112307..112486,112641..112846,112938..113641,113728..113902,113989..114084,114254..114360,114479..114613,114735..114848,115011..115139,115235..115405,115543..115976,116095..116213,116421..117260))	Acanthamoeba castellanii str. Neff	14916080
ACA1_275820	CDS	ACA1_275820	NW_004457384.1	117451	120000	R	encoded by transcript ACA1_275820A; uncharacterized protein	complement(join(117451..117597,117711..117812,117921..118052,118143..118239,118329..118426,118809..118936,119032..119087,119179..119249,119381..119459,119570..119666,119865..120000))	Acanthamoeba castellanii str. Neff	14916081
ACA1_275830	CDS	ACA1_275830	NW_004457384.1	120422	123272	D	encoded by transcript ACA1_275830A; Armadillo/betacatenin-like repeat domain containing protein	join(120422..120918,121031..121221,121448..121570,121693..121821,121928..122050,122225..122350,122486..122608,122881..123003,123148..123272)	Acanthamoeba castellanii str. Neff	14916082
ACA1_275940	CDS	ACA1_275940	NW_004457384.1	123457	124506	D	encoded by transcript ACA1_275940A; B-cell receptor-associated protein 31 family protein	join(123457..123646,123746..123905,124185..124506)	Acanthamoeba castellanii str. Neff	14916083
ACA1_275960	CDS	ACA1_275960	NW_004457384.1	127609	128472	R	encoded by transcript ACA1_275960A; uncharacterized protein	complement(join(127609..127758,128068..128472))	Acanthamoeba castellanii str. Neff	14916085
ACA1_276070	CDS	ACA1_276070	NW_004457384.1	128715	129458	R	encoded by transcript ACA1_276070A; uncharacterized protein	complement(join(128715..128904,129150..129382,129426..129458))	Acanthamoeba castellanii str. Neff	14916086
ACA1_276080	CDS	ACA1_276080	NW_004457384.1	129634	131572	D	encoded by transcript ACA1_276080A; serine 3-dehydrogenase	join(129634..129701,129989..130061,130301..130388,130732..130777,130858..130910,131111..131188,131278..131407,131494..131572)	Acanthamoeba castellanii str. Neff	14916087
ACA1_276090	CDS	ACA1_276090	NW_004457384.1	131682	136796	R	encoded by transcript ACA1_276090A; PH domain containing protein	complement(join(131682..131914,132047..132449,132637..132726,132798..132863,133051..133161,133351..133569,133859..134026,134293..134338,134382..136059,136178..136796))	Acanthamoeba castellanii str. Neff	14916088
ACA1_276100	CDS	ACA1_276100	NW_004457384.1	139016	139566	R	encoded by transcript ACA1_276100A; Hypothetical protein	complement(join(<139016..139089,139230..139434,139439..>139566))	Acanthamoeba castellanii str. Neff	14916089
ACA1_276210	CDS	ACA1_276210	NW_004457384.1	140372	142260	D	encoded by transcript ACA1_276210A; mitochondrial aspartate aminotransferase	join(140372..140635,140720..140860,140968..141203,141282..141344,141505..141605,141688..141829,141895..142069,142135..142260)	Acanthamoeba castellanii str. Neff	14916090
ACA1_276320	CDS	ACA1_276320	NW_004457384.1	146500	146805	D	encoded by transcript ACA1_276320A; aspartate aminotransferase, mitochondrial, putative	join(146500..146610,146680..146805)	Acanthamoeba castellanii str. Neff	14916091
ACA1_276330	CDS	ACA1_276330	NW_004457384.1	149000	151507	R	encoded by transcript ACA1_276330A; VRRNUC domain containing protein	complement(join(149000..149169,149228..149309,149370..149452,149532..149657,149758..149965,150147..150564,150672..>151507))	Acanthamoeba castellanii str. Neff	14916092
ACA1_276340	CDS	ACA1_276340	NW_004457384.1	151909	153155	R	encoded by transcript ACA1_276340A; uncharacterized protein	complement(join(151909..151917,151944..152218,152316..152387,152490..152631,152754..152866,152987..153042,153103..153155))	Acanthamoeba castellanii str. Neff	14916093
ACA1_276350	CDS	ACA1_276350	NW_004457384.1	153480	154381	D	encoded by transcript ACA1_276350A; uncharacterized protein	join(153480..153539,153610..153761,154360..154381)	Acanthamoeba castellanii str. Neff	14916054
ACA1_276360	CDS	ACA1_276360	NW_004457384.1	154565	155710	D	encoded by transcript ACA1_276360A; endonuclease V protein	join(154565..154690,154725..154811,155090..155224,155420..155526,155644..155710)	Acanthamoeba castellanii str. Neff	14916055
ACA1_276370	CDS	ACA1_276370	NW_004457384.1	155828	158859	R	encoded by transcript ACA1_276370A; acetylCoA hydrolase/transferase, putative	complement(join(155828..156070,156233..156345,156445..156557,156681..156859,156949..157102,157148..157374,157497..157610,157784..157841,157853..157965,158248..158338,158519..158591,158766..158859))	Acanthamoeba castellanii str. Neff	14916056
ACA1_276380	CDS	ACA1_276380	NW_004457384.1	159640	162369	D	encoded by transcript ACA1_276380A; Na+ dependent nucleoside transporterlike, putative	join(159640..159660,159690..159793,159906..160021,160105..160197,160241..160363,160729..160822,160930..161051,161176..161277,161392..161475,161603..161668,161846..161980,162146..162206,162309..162369)	Acanthamoeba castellanii str. Neff	14916057
ACA1_276390	CDS	ACA1_276390	NW_004457384.1	162454	163903	D	encoded by transcript ACA1_276390A; uncharacterized protein	join(162454..162697,162819..162931,163079..163139,163273..163379,163517..163903)	Acanthamoeba castellanii str. Neff	14916058
ACA1_276400	CDS	ACA1_276400	NW_004457384.1	164371	166587	R	encoded by transcript ACA1_276400A; osialoglycoprotein endopeptidase, putative	complement(join(164371..164515,164614..164900,165091..165159,165659..165784,165964..166055,166179..166308,166337..166552,166573..166587))	Acanthamoeba castellanii str. Neff	14916059
ACA1_276410	CDS	ACA1_276410	NW_004457384.1	167003	170038	D	encoded by transcript ACA1_276410A; Phosphate transporter family protein	join(167003..167050,167161..167196,167305..167410,167495..167647,167842..167946,168120..168233,168365..168454,168581..168829,168997..169097,169206..169266,169375..169469,169553..169688,169815..170038)	Acanthamoeba castellanii str. Neff	14916060
ACA1_276420	CDS	ACA1_276420	NW_004457384.1	171327	172824	D	encoded by transcript ACA1_276420A; mitochondrial glutamate carrier 1, putative	join(171327..171544,171649..171819,171948..172062,172144..172311,172436..172590,172677..172824)	Acanthamoeba castellanii str. Neff	14916061
ACA1_276440	CDS	ACA1_276440	NW_004457384.1	177167	180391	D	encoded by transcript ACA1_276440A; trafficking protein mon1 subfamily protein	join(177167..177766,177886..178028,178427..178508,178690..178813,178944..179091,179221..179294,179397..179493,179673..179964,180085..180189,180206..180391)	Acanthamoeba castellanii str. Neff	14916063
ACA1_276450	CDS	ACA1_276450	NW_004457384.1	180486	183045	R	encoded by transcript ACA1_276450A; Myblike DNA-binding domain containing protein	complement(join(180486..180855,180915..181625,181768..182162,182427..182491,182661..183045))	Acanthamoeba castellanii str. Neff	14916064
ACA1_276460	CDS	ACA1_276460	NW_004457384.1	183532	185578	D	encoded by transcript ACA1_276460A; uncharacterized protein	join(183532..183577,183595..183893,183967..184560,184678..184741,184863..184943,185100..185222,185331..185578)	Acanthamoeba castellanii str. Neff	14916065
ACA1_276470	CDS	ACA1_276470	NW_004457384.1	185804	188371	R	encoded by transcript ACA1_276470A; Frizzled/Smoothened family membrane region protein	complement(join(185804..186010,186114..186284,186420..186536,186657..186718,186798..186979,187070..187160,187294..187695,187809..187982,188110..188371))	Acanthamoeba castellanii str. Neff	14916066
ACA1_276480	CDS	ACA1_276480	NW_004457384.1	189249	191976	D	encoded by transcript ACA1_276480A; uncharacterized protein	join(<189249..189356,189436..189519,189617..189729,189991..190059,190229..190299,190443..190554,190674..190769,190882..190946,191038..191123,191233..191346,191428..191561,191636..191744,191893..191976)	Acanthamoeba castellanii str. Neff	14916067
ACA1_276490	CDS	ACA1_276490	NW_004457384.1	192583	193571	D	encoded by transcript ACA1_276490A; Vesicle-associated membrane protein, putative	join(192583..192734,192844..192997,193080..193170,193253..193422,193509..193571)	Acanthamoeba castellanii str. Neff	14916068
ACA1_276610	CDS	ACA1_276610	NW_004457384.1	196324	198057	D	encoded by transcript ACA1_276610A; Ankyrin repeatcontaining protein	join(196324..196446,196573..196722,196832..197075,197131..197202,197303..197446,197542..197688,197759..198057)	Acanthamoeba castellanii str. Neff	14916009
ACA1_276620	CDS	ACA1_276620	NW_004457384.1	200138	202725	R	encoded by transcript ACA1_276620A; DnaJ domain containing protein	complement(join(200138..200490,200580..201171,201252..202276,202353..202725))	Acanthamoeba castellanii str. Neff	14916010
ACA1_276630	CDS	ACA1_276630	NW_004457384.1	203021	205632	D	encoded by transcript ACA1_276630A; K+ channel tetramerization subfamily protein	join(203021..203576,203736..204119,204209..204654,204754..204877,204980..205632)	Acanthamoeba castellanii str. Neff	14916011
ACA1_276640	CDS	ACA1_276640	NW_004457384.1	205862	206502	R	encoded by transcript ACA1_276640A; uncharacterized protein	complement(join(205862..206016,206259..206502))	Acanthamoeba castellanii str. Neff	14916012
ACA1_276650	CDS	ACA1_276650	NW_004457384.1	207210	209077	D	encoded by transcript ACA1_276650A; IgA-specific serine endopeptidase	join(207210..207247,207401..207859,207946..209077)	Acanthamoeba castellanii str. Neff	14916013
ACA1_276760	CDS	ACA1_276760	NW_004457384.1	210541	210819	R	encoded by transcript ACA1_276760A; uncharacterized protein	complement(210541..210819)	Acanthamoeba castellanii str. Neff	14916014
ACA1_276770	CDS	ACA1_276770	NW_004457384.1	211214	211899	D	encoded by transcript ACA1_276770A; uncharacterized protein	join(211214..211410,211509..211899)	Acanthamoeba castellanii str. Neff	14916015
ACA1_276780	CDS	ACA1_276780	NW_004457384.1	212030	216417	R	encoded by transcript ACA1_276780A; phosphate-binding periplasmic protein, putative	complement(join(212030..212241,212371..212440,212566..212749,212871..213018,213111..213341,213431..213494,213665..213823,213940..214198,214325..214435,214564..214747,214879..214944,215039..215162,215272..215406,215574..215726,215813..215970,216059..216204,216392..216417))	Acanthamoeba castellanii str. Neff	14916016
ACA1_276790	CDS	ACA1_276790	NW_004457384.1	217392	219916	D	encoded by transcript ACA1_276790A; zinc finger, C3HC4 type (RING finger) domain containing protein	join(217392..217403,217493..217557,217723..217835,217898..218068,218197..218674,218783..218950,219346..219916)	Acanthamoeba castellanii str. Neff	14916017
ACA1_276800	CDS	ACA1_276800	NW_004457384.1	220596	221930	D	encoded by transcript ACA1_276800A; uncharacterized protein	join(220596..221464,221606..221930)	Acanthamoeba castellanii str. Neff	14916018
ACA1_276810	CDS	ACA1_276810	NW_004457384.1	222271	223958	R	encoded by transcript ACA1_276810A; GATA zinc finger domain containing protein	complement(join(222271..223078,223166..223889,223916..223958))	Acanthamoeba castellanii str. Neff	14916019
ACA1_276820	CDS	ACA1_276820	NW_004457384.1	225078	226340	D	encoded by transcript ACA1_276820A; ankyrin 2,3/unc44, putative	join(225078..225211,225281..225579,225668..225802,225894..226037,226165..226340)	Acanthamoeba castellanii str. Neff	14916020
ACA1_276830	CDS	ACA1_276830	NW_004457384.1	226529	227590	R	encoded by transcript ACA1_276830A; peptidylprolyl cis-trans isomerase	complement(join(226529..226611,226709..226739,226839..226921,227002..227065,227144..227206,227327..227427,227497..227590))	Acanthamoeba castellanii str. Neff	14916021
ACA1_276840	CDS	ACA1_276840	NW_004457384.1	227971	228237	R	encoded by transcript ACA1_276840A; uncharacterized protein	complement(227971..>228237)	Acanthamoeba castellanii str. Neff	14916022
ACA1_276860	CDS	ACA1_276860	NW_004457384.1	241120	242025	R	encoded by transcript ACA1_276860A; ribonuclease, putative	complement(join(241120..241256,241377..241478,241549..241604,241715..241786,241877..242025))	Acanthamoeba castellanii str. Neff	14916024
ACA1_276870	CDS	ACA1_276870	NW_004457384.1	243147	243819	D	encoded by transcript ACA1_276870A; Peroxin 4 (Pex4), putative	join(243147..243174,243285..243412,243468..243591,243716..243819)	Acanthamoeba castellanii str. Neff	14916025
ACA1_276880	CDS	ACA1_276880	NW_004457384.1	243894	244604	R	encoded by transcript ACA1_276880A; cullin, putative	complement(join(243894..244096,244203..244392,244470..244604))	Acanthamoeba castellanii str. Neff	14916002
ACA1_276890	CDS	ACA1_276890	NW_004457384.1	244607	247146	R	encoded by transcript ACA1_276890A; dual specificity phosphatase, catalytic domain containing protein	complement(join(244607..244813,244938..245082,245181..245329,245410..245735,245827..246355,246477..246546,246653..246755,246828..246894,246979..247146))	Acanthamoeba castellanii str. Neff	14916003
ACA1_276900	CDS	ACA1_276900	NW_004457384.1	247373	250221	R	encoded by transcript ACA1_276900A; Fbox domain containing protein	complement(join(247373..247389,247472..247562,247680..247829,247919..248037,248128..248176,248269..248373,248490..248587,248709..248818,248921..249299,249384..249478,249603..249709,249811..249870,249964..250221))	Acanthamoeba castellanii str. Neff	14916004
ACA1_277010	CDS	ACA1_277010	NW_004457384.1	253134	253361	D	encoded by transcript ACA1_277010A; uncharacterized protein	253134..253361	Acanthamoeba castellanii str. Neff	14916005
ACA1_277020	CDS	ACA1_277020	NW_004457384.1	253712	254281	R	encoded by transcript ACA1_277020A; uncharacterized protein	complement(join(253712..253817,253943..254078,254204..254220,254235..>254281))	Acanthamoeba castellanii str. Neff	14916006
ACA1_193750	CDS	ACA1_193750	NW_004457383.1	229	660	R	encoded by transcript ACA1_193750A; Fbox domain containing protein	complement(join(229..281,354..482,615..660))	Acanthamoeba castellanii str. Neff	14915997
ACA1_193960	CDS	ACA1_193960	NW_004457383.1	14365	14553	R	encoded by transcript ACA1_193960A; uncharacterized protein	complement(14365..14553)	Acanthamoeba castellanii str. Neff	14915998
ACA1_194170	CDS	ACA1_194170	NW_004457383.1	29865	31317	D	encoded by transcript ACA1_194170A; pol polyprotein	join(29865..30314,30412..31065,31119..31208,31258..31317)	Acanthamoeba castellanii str. Neff	14915993
ACA1_194280	CDS	ACA1_194280	NW_004457383.1	35761	37111	D	encoded by transcript ACA1_194280A; uncharacterized protein	join(35761..35780,35878..35945,36065..36176,36341..36442,36549..36663,36752..36836,36942..37111)	Acanthamoeba castellanii str. Neff	14915994
ACA1_194290	CDS	ACA1_194290	NW_004457383.1	37397	37738	R	encoded by transcript ACA1_194290A; uncharacterized protein	complement(join(37397..37454,37632..37738))	Acanthamoeba castellanii str. Neff	14915995
ACA1_194400	CDS	ACA1_194400	NW_004457383.1	41894	42332	D	encoded by transcript ACA1_194400A; uncharacterized protein	join(41894..41964,42050..42131,42266..42288,42314..42332)	Acanthamoeba castellanii str. Neff	14915996
ACA1_328290	CDS	ACA1_328290	NW_004457382.1	974	1228	D	encoded by transcript ACA1_328290A; uncharacterized protein	974..1228	Acanthamoeba castellanii str. Neff	14915983
ACA1_328400	CDS	ACA1_328400	NW_004457382.1	4119	5215	D	encoded by transcript ACA1_328400A; uncharacterized protein	join(4119..4314,4326..4381,4559..>5215)	Acanthamoeba castellanii str. Neff	14915984
ACA1_328610	CDS	ACA1_328610	NW_004457382.1	9347	9601	D	encoded by transcript ACA1_328610A; uncharacterized protein	9347..9601	Acanthamoeba castellanii str. Neff	14915985
ACA1_328620	CDS	ACA1_328620	NW_004457382.1	10503	11388	D	encoded by transcript ACA1_328620A; EcoT38I methyltransferase	join(10503..10587,10679..11388)	Acanthamoeba castellanii str. Neff	14915986
ACA1_328630	CDS	ACA1_328630	NW_004457382.1	11885	15978	D	encoded by transcript ACA1_328630A; EF hand domain containing protein	join(11885..11966,12145..12239,12381..12479,12568..12718,12853..12977,13087..13198,13340..13483,13594..13712,13805..13897,13982..14173,14287..14404,14524..14693,14815..14917,14979..15070,15210..15367,15442..15530,15636..15764,15887..15978)	Acanthamoeba castellanii str. Neff	14915987
ACA1_328640	CDS	ACA1_328640	NW_004457382.1	16186	18217	R	encoded by transcript ACA1_328640A; Sec1 family protein	complement(join(16186..16330,16429..16517,16638..16796,16903..17115,17189..17434,17517..17660,17750..17907,17998..>18217))	Acanthamoeba castellanii str. Neff	14915988
ACA1_328750	CDS	ACA1_328750	NW_004457382.1	19690	22871	D	encoded by transcript ACA1_328750A; tetratricopeptide repeat domain containing protein	join(19690..20156,20251..20386,20470..20667,20747..20960,20987..21064,21129..21625,21707..21807,21903..22043,22126..22223,22330..22871)	Acanthamoeba castellanii str. Neff	14915989
ACA1_328760	CDS	ACA1_328760	NW_004457382.1	23063	24567	D	encoded by transcript ACA1_328760A; 3'(2'),5'bisphosphate nucleotidase	join(23063..23526,23635..23735,23818..24012,24112..24202,24270..24402,24487..24567)	Acanthamoeba castellanii str. Neff	14915990
ACA1_328770	CDS	ACA1_328770	NW_004457382.1	25227	26742	R	encoded by transcript ACA1_328770A; aldo/keto reductase	complement(join(25227..25604,25688..25823,25893..26003,26077..26234,26315..26515,26602..26742))	Acanthamoeba castellanii str. Neff	14915991
ACA1_328780	CDS	ACA1_328780	NW_004457382.1	27424	28456	R	encoded by transcript ACA1_328780A; Actin subfamily protein	complement(join(27424..28140,28252..28279,28302..28456))	Acanthamoeba castellanii str. Neff	14915992
ACA1_328790	CDS	ACA1_328790	NW_004457382.1	29013	30166	R	encoded by transcript ACA1_328790A; Aryl-alcohol dehydrogenase (NADP+), putative	complement(join(29013..29174,29539..29658,29739..29939,30023..30166))	Acanthamoeba castellanii str. Neff	14915979
ACA1_328900	CDS	ACA1_328900	NW_004457382.1	30826	31560	R	encoded by transcript ACA1_328900A; actin-1, putative	complement(30826..31560)	Acanthamoeba castellanii str. Neff	14915980
ACA1_328910	CDS	ACA1_328910	NW_004457382.1	31764	34099	R	encoded by transcript ACA1_328910A; uncharacterized protein	complement(join(31764..31871,31921..31997,32051..32139,32193..32332,32387..32700,32930..33197,33384..33574,33782..33854,33926..34099))	Acanthamoeba castellanii str. Neff	14915981
ACA1_328920	CDS	ACA1_328920	NW_004457382.1	34194	34950	R	encoded by transcript ACA1_328920A; actin, putative	complement(join(34194..34222,34551..34950))	Acanthamoeba castellanii str. Neff	14915982
ACA1_086520	CDS	ACA1_086520	NW_004457381.1	36	834	R	encoded by transcript ACA1_086520A; COMM domain containing protein 1, putative	complement(join(<36..206,344..406,476..597,702..834))	Acanthamoeba castellanii str. Neff	14915971
ACA1_086530	CDS	ACA1_086530	NW_004457381.1	1014	4174	D	encoded by transcript ACA1_086530A; uncharacterized protein	join(1014..1174,1304..1416,1539..1666,1761..1870,3460..3571,3666..3775,3837..3952,4068..4174)	Acanthamoeba castellanii str. Neff	14915974
ACA1_086640	CDS	ACA1_086640	NW_004457381.1	4594	6813	D	encoded by transcript ACA1_086640A; Channel-conductance-controlling ATPase	join(4594..4650,4774..4855,4956..5094,5195..5318,5458..5553,5684..5843,6008..6104,6236..6311,6425..6552,6636..6681,6766..6813)	Acanthamoeba castellanii str. Neff	14915978
ACA1_086750	CDS	ACA1_086750	NW_004457381.1	7078	9180	D	encoded by transcript ACA1_086750A; ABC transporter transmembrane region domain containing protein	join(7078..7440,7504..7593,7701..7845,8000..8206,8304..8605,8772..8892,8965..>9180)	Acanthamoeba castellanii str. Neff	14915977
ACA1_086860	CDS	ACA1_086860	NW_004457381.1	13010	15577	R	encoded by transcript ACA1_086860A; Magnesium-ATPase	complement(join(13010..13167,13286..13395,13506..13590,13775..13890,14034..14175,14305..14398,14526..14636,14751..14844,15087..15159,15268..15400,15554..15577))	Acanthamoeba castellanii str. Neff	14915973
ACA1_087070	CDS	ACA1_087070	NW_004457381.1	21301	22089	R	encoded by transcript ACA1_087070A; uncharacterized protein	complement(21301..22089)	Acanthamoeba castellanii str. Neff	14915975
ACA1_087180	CDS	ACA1_087180	NW_004457381.1	26131	26614	D	encoded by transcript ACA1_087180A; uncharacterized protein	join(26131..26139,26264..26288,26323..26488,26605..26614)	Acanthamoeba castellanii str. Neff	14915976
ACA1_087190	CDS	ACA1_087190	NW_004457381.1	26846	29263	D	encoded by transcript ACA1_087190A; uncharacterized protein	join(26846..26924,27024..27097,27170..27253,27415..28024,28117..28399,28575..28744,28815..28927,29036..>29263)	Acanthamoeba castellanii str. Neff	14915972
ACA1_210210	CDS	ACA1_210210	NW_004457380.1	7	2121	R	encoded by transcript ACA1_210210A; THO1 protein (nuclear matrix protein p84), putative	complement(join(<7..138,256..372,461..673,749..906,1010..1099,1220..1619,1798..2007,2089..2121))	Acanthamoeba castellanii str. Neff	14915604
ACA1_210230	CDS	ACA1_210230	NW_004457380.1	4333	7979	R	encoded by transcript ACA1_210230A; potassium transporter subfamily protein	complement(join(4333..4417,4840..4934,5050..5199,5311..5482,5556..5717,5867..6104,6172..6778,6844..7088,7163..7315,7415..7979))	Acanthamoeba castellanii str. Neff	14915766
ACA1_210240	CDS	ACA1_210240	NW_004457380.1	8711	14958	R	encoded by transcript ACA1_210240A; Ras subfamily protein	complement(join(8711..8832,9016..9127,9218..9367,9444..9545,9652..9708,10561..10731,10801..10922,11370..11481,11572..11721,11796..11823,11845..11897,12006..12079,12169..12253,12366..12409,12658..12773,12862..13039,13200..13346,13448..13669,13783..13947,14042..14203,14275..14850,14916..14958))	Acanthamoeba castellanii str. Neff	14915767
ACA1_210250	CDS	ACA1_210250	NW_004457380.1	15369	24187	R	encoded by transcript ACA1_210250A; villin headpiece domain containing protein	complement(join(15369..15506,15595..15734,15836..15947,16022..16123,16213..16422,16539..16761,16842..16990,17072..17189,17281..17385,17465..17601,17684..17901,18010..18235,18315..18470,18553..18713,18794..19146,19232..19305,19420..19492,19596..19750,19835..20177,20263..20462,20555..20684,20885..21300,21406..21708,21983..22072,22178..22480,22701..22902,22975..23063,23141..23289,23363..23533,23614..23731,23875..23952,24044..24187))	Acanthamoeba castellanii str. Neff	14915710
ACA1_210360	CDS	ACA1_210360	NW_004457380.1	28807	30845	R	encoded by transcript ACA1_210360A; Solute carrier family 13 (sodiumdependent dicarboxylate transporter), member 2, putative	complement(join(28807..28933,29030..29199,29283..29813,29906..30013,30326..30429,30518..30636,30751..30845))	Acanthamoeba castellanii str. Neff	14915685
ACA1_210370	CDS	ACA1_210370	NW_004457380.1	31502	32338	D	encoded by transcript ACA1_210370A; uncharacterized protein	31502..32338	Acanthamoeba castellanii str. Neff	14915598
ACA1_210380	CDS	ACA1_210380	NW_004457380.1	32728	34785	D	encoded by transcript ACA1_210380A; PQ loop repeat-containing protein	join(32728..32796,32940..33044,33167..33241,33347..33409,33492..33513,33692..33791,33892..33952,34025..34096,34163..34255,34385..34434,34532..34601,34678..34785)	Acanthamoeba castellanii str. Neff	14915599
ACA1_210390	CDS	ACA1_210390	NW_004457380.1	35669	37754	D	encoded by transcript ACA1_210390A; uncharacterized protein	join(35669..35752,35902..36727,36850..36988,37081..37170,37276..37484,37633..37754)	Acanthamoeba castellanii str. Neff	14915600
ACA1_210400	CDS	ACA1_210400	NW_004457380.1	38691	40822	R	encoded by transcript ACA1_210400A; protein phosphatase 2C domain containing protein	complement(join(38691..38873,38977..39044,39144..39205,39301..39389,39472..39551,39662..39748,39834..39920,40010..40088,40185..40260,40351..40447,40801..40822))	Acanthamoeba castellanii str. Neff	14915601
ACA1_210510	CDS	ACA1_210510	NW_004457380.1	41676	42662	D	encoded by transcript ACA1_210510A; uncharacterized protein	join(41676..41782,41906..41972,42094..42178,42280..42356,42431..42521,42619..42662)	Acanthamoeba castellanii str. Neff	14915602
ACA1_210520	CDS	ACA1_210520	NW_004457380.1	43803	45858	D	encoded by transcript ACA1_210520A; myblike DNA-binding domain, SHAQKYF class subfamily protein	join(43803..43880,43998..44074,44215..44429,44513..44833,44900..45082,45169..45538,45585..45858)	Acanthamoeba castellanii str. Neff	14915699
ACA1_210530	CDS	ACA1_210530	NW_004457380.1	46528	50678	R	encoded by transcript ACA1_210530A; pyruvate:ferredoxin (flavodoxin) oxidoreductase	complement(join(46528..46876,46973..47049,47156..47593,47633..47739,47844..48664,48757..48860,48959..49657,49754..50104,50227..50345,50424..50540,50609..50678))	Acanthamoeba castellanii str. Neff	14915700
ACA1_210540	CDS	ACA1_210540	NW_004457380.1	51026	55115	R	encoded by transcript ACA1_210540A; ABC transporter, ATPbinding domain containing protein	complement(join(51026..51193,51271..51705,51784..51911,51999..52370,52435..52571,52661..52835,52940..53309,53357..53449,53540..53851,53937..54075,54174..54354,54420..54541,54625..55115))	Acanthamoeba castellanii str. Neff	14915701
ACA1_210550	CDS	ACA1_210550	NW_004457380.1	55880	56722	R	encoded by transcript ACA1_210550A; uncharacterized protein	complement(join(55880..55963,56026..56127,56227..56340,56405..56528,56607..56722))	Acanthamoeba castellanii str. Neff	14915702
ACA1_210560	CDS	ACA1_210560	NW_004457380.1	57481	61285	D	encoded by transcript ACA1_210560A; uncharacterized protein	join(57481..57487,57677..57856,57951..58280,59579..59986,60128..60355,60463..60629,60705..60783,60865..60961,61144..61285)	Acanthamoeba castellanii str. Neff	14915703
ACA1_210670	CDS	ACA1_210670	NW_004457380.1	62161	62935	R	encoded by transcript ACA1_210670A; universal stress domain containing protein	complement(join(62161..62201,62291..62369,62435..62506,62618..62729,62814..62935))	Acanthamoeba castellanii str. Neff	14915704
ACA1_210680	CDS	ACA1_210680	NW_004457380.1	63486	65685	D	encoded by transcript ACA1_210680A; U-box domain containing protein	join(63486..63563,63694..63854,63948..64060,64154..64522,64610..64811,65088..65283,65590..65685)	Acanthamoeba castellanii str. Neff	14915705
ACA1_210790	CDS	ACA1_210790	NW_004457380.1	66087	67752	D	encoded by transcript ACA1_210790A; uncharacterized protein	join(66087..67052,67130..67216,67285..67368,67448..67535,67628..67752)	Acanthamoeba castellanii str. Neff	14915706
ACA1_210800	CDS	ACA1_210800	NW_004457380.1	67955	68443	D	encoded by transcript ACA1_210800A; riboflavin aldehydeforming enzyme, putative	join(67955..68104,68175..68261,68333..68443)	Acanthamoeba castellanii str. Neff	14915707
ACA1_210810	CDS	ACA1_210810	NW_004457380.1	68977	70688	D	encoded by transcript ACA1_210810A; PH domain containing protein	join(68977..69030,69128..69268,69353..69541,69680..69940,70030..70113,70193..70302,70379..70433,70548..70688)	Acanthamoeba castellanii str. Neff	14915708
ACA1_211130	CDS	ACA1_211130	NW_004457380.1	73877	75155	D	encoded by transcript ACA1_211130A; kinase, pfkB superfamily protein	join(73877..74021,74092..74223,74366..74478,74583..74766,74853..74965,75048..75155)	Acanthamoeba castellanii str. Neff	14915823
ACA1_211140	CDS	ACA1_211140	NW_004457380.1	75253	77061	D	encoded by transcript ACA1_211140A; Ser/Thr protein phosphatase	join(75253..75565,75704..75843,75921..76013,76097..76579,76664..76814,76912..76944,77033..77061)	Acanthamoeba castellanii str. Neff	14915824
ACA1_211150	CDS	ACA1_211150	NW_004457380.1	77230	78746	D	encoded by transcript ACA1_211150A; Ser/Thr phosphatase family superfamily protein	join(77230..77437,77564..77703,77800..77892,78001..78465,78529..78679,78739..78746)	Acanthamoeba castellanii str. Neff	14915825
ACA1_211270	CDS	ACA1_211270	NW_004457380.1	80046	81484	D	encoded by transcript ACA1_211270A; Rasrelated protein Rab-39B, putative	join(80046..80116,80157..80323,80460..80559,80609..80774,80990..81091,81213..81296,81440..81484)	Acanthamoeba castellanii str. Neff	14915827
ACA1_211380	CDS	ACA1_211380	NW_004457380.1	83446	85336	D	encoded by transcript ACA1_211380A; uncharacterized protein	join(83446..83583,83711..83793,83845..83947,84014..84228,84354..84460,84689..85068,85163..>85336)	Acanthamoeba castellanii str. Neff	14915828
ACA1_211490	CDS	ACA1_211490	NW_004457380.1	85600	86831	D	encoded by transcript ACA1_211490A; uncharacterized protein	join(<85600..86028,86165..86371,86490..86831)	Acanthamoeba castellanii str. Neff	14915829
ACA1_211500	CDS	ACA1_211500	NW_004457380.1	87419	90143	D	encoded by transcript ACA1_211500A; RAB5B protein, putative	join(87419..87489,87533..87699,87832..87931,87977..88142,88207..88245,88340..88464,88555..88638,88723..88804,88906..88977,89037..89117,89226..89330,89419..89745,89808..89959,90038..90143)	Acanthamoeba castellanii str. Neff	14915830
ACA1_211510	CDS	ACA1_211510	NW_004457380.1	90678	91451	R	encoded by transcript ACA1_211510A; DEAD/DEAH box helicase domain containing protein	complement(join(90678..90717,90832..91451))	Acanthamoeba castellanii str. Neff	14915831
ACA1_211520	CDS	ACA1_211520	NW_004457380.1	93173	98325	R	encoded by transcript ACA1_211520A; surface antigen repeat-containing protein	complement(join(93173..93457,93545..93640,93719..93863,93916..94575,94670..95250,95270..95386,95402..95507,95555..96423,96505..97566,97578..97821,97911..98015,98119..98209,98283..98325))	Acanthamoeba castellanii str. Neff	14915832
ACA1_211740	CDS	ACA1_211740	NW_004457380.1	100232	100801	D	encoded by transcript ACA1_211740A; uncharacterized protein	join(100232..100451,100494..100724,100788..100801)	Acanthamoeba castellanii str. Neff	14915957
ACA1_211750	CDS	ACA1_211750	NW_004457380.1	101127	102714	R	encoded by transcript ACA1_211750A; protein kinase domain containing protein	complement(join(101127..101378,101460..101726,101772..102115,102531..102714))	Acanthamoeba castellanii str. Neff	14915958
ACA1_211760	CDS	ACA1_211760	NW_004457380.1	104283	107029	R	encoded by transcript ACA1_211760A; uncharacterized protein	complement(join(104283..104406,104503..104659,104736..104832,104899..104980,105053..105415,105480..105577,105645..106817,106976..107029))	Acanthamoeba castellanii str. Neff	14915959
ACA1_211770	CDS	ACA1_211770	NW_004457380.1	107621	110187	R	encoded by transcript ACA1_211770A; tetratricopeptide repeat domain containing protein	complement(join(107621..107674,107776..107840,107918..108063,108132..108186,108279..108418,108504..108567,108622..108690,108731..108823,108919..109117,109192..109513,109735..109786,109862..109918,109986..110187))	Acanthamoeba castellanii str. Neff	14915960
ACA1_211790	CDS	ACA1_211790	NW_004457380.1	112556	115289	D	encoded by transcript ACA1_211790A; RhoGEF domain containing protein	join(112556..112573,112609..112681,112713..113658,113862..114024,114134..114337,114460..114621,114718..114789,114854..114935,115030..115289)	Acanthamoeba castellanii str. Neff	14915962
ACA1_211800	CDS	ACA1_211800	NW_004457380.1	115318	115831	R	encoded by transcript ACA1_211800A; uncharacterized protein	complement(join(115318..115557,115706..115831))	Acanthamoeba castellanii str. Neff	14915963
ACA1_211810	CDS	ACA1_211810	NW_004457380.1	116515	116852	R	encoded by transcript ACA1_211810A; uncharacterized protein	complement(join(116515..116610,116643..116852))	Acanthamoeba castellanii str. Neff	14915964
ACA1_211920	CDS	ACA1_211920	NW_004457380.1	118134	118873	D	encoded by transcript ACA1_211920A; transcription factor SII (TFIIS) domain containing protein	join(118134..118309,118399..118525,118598..118707,118849..118873)	Acanthamoeba castellanii str. Neff	14915965
ACA1_211930	CDS	ACA1_211930	NW_004457380.1	119099	119825	R	encoded by transcript ACA1_211930A; uncharacterized protein	complement(join(119099..119383,119466..119659,119810..119825))	Acanthamoeba castellanii str. Neff	14915966
ACA1_211940	CDS	ACA1_211940	NW_004457380.1	120041	120511	R	encoded by transcript ACA1_211940A; uncharacterized protein	complement(120041..120511)	Acanthamoeba castellanii str. Neff	14915967
ACA1_211950	CDS	ACA1_211950	NW_004457380.1	120786	121382	R	encoded by transcript ACA1_211950A; uncharacterized protein	complement(120786..121382)	Acanthamoeba castellanii str. Neff	14915968
ACA1_211960	CDS	ACA1_211960	NW_004457380.1	122859	123223	R	encoded by transcript ACA1_211960A; uncharacterized protein	complement(join(122859..122901,122986..123031,123088..123223))	Acanthamoeba castellanii str. Neff	14915969
ACA1_211970	CDS	ACA1_211970	NW_004457380.1	123415	124010	D	encoded by transcript ACA1_211970A; uncharacterized protein	join(123415..123496,123557..123764,123833..124010)	Acanthamoeba castellanii str. Neff	14915970
ACA1_212080	CDS	ACA1_212080	NW_004457380.1	127551	128034	R	encoded by transcript ACA1_212080A; uncharacterized protein	complement(join(127551..127570,127587..128034))	Acanthamoeba castellanii str. Neff	14915910
ACA1_212090	CDS	ACA1_212090	NW_004457380.1	128710	129027	R	encoded by transcript ACA1_212090A; uncharacterized protein	complement(128710..129027)	Acanthamoeba castellanii str. Neff	14915911
ACA1_212200	CDS	ACA1_212200	NW_004457380.1	129342	129893	R	encoded by transcript ACA1_212200A; uncharacterized protein	complement(129342..129893)	Acanthamoeba castellanii str. Neff	14915912
ACA1_212210	CDS	ACA1_212210	NW_004457380.1	130666	137257	R	encoded by transcript ACA1_212210A; HEAT repeat domain containing protein	complement(join(130666..130995,131118..131171,131273..131328,131495..131540,131721..131788,131890..131950,132042..132107,132188..132253,132415..132489,132643..132751,132891..133001,133096..133186,133329..133428,133506..133580,133682..133735,133811..133907,134010..134221,134347..134448,134594..134740,134841..135002,135153..135269,135379..135483,135569..135643,135766..136167,136312..136734,136800..136880,136952..137257))	Acanthamoeba castellanii str. Neff	14915913
ACA1_212220	CDS	ACA1_212220	NW_004457380.1	137393	137719	R	encoded by transcript ACA1_212220A; uncharacterized protein	complement(join(137393..137592,137647..137719))	Acanthamoeba castellanii str. Neff	14915914
ACA1_212230	CDS	ACA1_212230	NW_004457380.1	137827	138416	D	encoded by transcript ACA1_212230A; uncharacterized protein	join(137827..137928,138073..138309,138396..138416)	Acanthamoeba castellanii str. Neff	14915915
ACA1_212240	CDS	ACA1_212240	NW_004457380.1	138847	143311	D	encoded by transcript ACA1_212240A; esterase/lipase (), putative	join(138847..139144,139258..139387,139410..139583,139677..139749,139957..140808,140883..141045,141571..141627,141834..141943,142034..142112,142197..142276,142344..142400,142477..142611,142700..142783,142884..143078,143186..143311)	Acanthamoeba castellanii str. Neff	14915916
ACA1_212350	CDS	ACA1_212350	NW_004457380.1	143433	146712	D	encoded by transcript ACA1_212350A; diacylglycerol kinase catalytic domain containing protein	join(143433..143470,143679..143766,144015..144236,144425..144642,144979..145122,145253..145410,145551..145680,145736..146297,146369..146605,146692..146712)	Acanthamoeba castellanii str. Neff	14915917
ACA1_212360	CDS	ACA1_212360	NW_004457380.1	147192	147432	D	encoded by transcript ACA1_212360A; uncharacterized protein	147192..>147432	Acanthamoeba castellanii str. Neff	14915918
ACA1_212470	CDS	ACA1_212470	NW_004457380.1	147923	151061	R	encoded by transcript ACA1_212470A; uncharacterized protein	complement(join(<147923..147941,148044..148119,148238..148373,148518..148813,148984..149098,149264..149369,149455..149568,149692..150081,150217..150274,150371..150489,150597..150696,150783..150834,150943..151061))	Acanthamoeba castellanii str. Neff	14915919
ACA1_212580	CDS	ACA1_212580	NW_004457380.1	151273	154208	D	encoded by transcript ACA1_212580A; uncharacterized protein	join(151273..151639,151779..151971,152090..152232,152461..153597,153679..153761,153835..153996,154107..154208)	Acanthamoeba castellanii str. Neff	14915920
ACA1_212590	CDS	ACA1_212590	NW_004457380.1	154629	155188	R	encoded by transcript ACA1_212590A; uncharacterized protein	complement(join(154629..154651,154791..154990,155076..155188))	Acanthamoeba castellanii str. Neff	14915921
ACA1_212700	CDS	ACA1_212700	NW_004457380.1	155365	155622	R	encoded by transcript ACA1_212700A; uncharacterized protein	complement(<155365..155622)	Acanthamoeba castellanii str. Neff	14915922
ACA1_212710	CDS	ACA1_212710	NW_004457380.1	156093	157905	D	encoded by transcript ACA1_212710A; uncharacterized protein	join(156093..156357,156456..157381,157457..157788,157824..>157905)	Acanthamoeba castellanii str. Neff	14915923
ACA1_212820	CDS	ACA1_212820	NW_004457380.1	158520	160575	R	encoded by transcript ACA1_212820A; uncharacterized protein	complement(join(158520..158616,158714..158781,158862..158958,159050..159114,159352..159492,159608..159896,159979..160153,160278..160473,160528..160575))	Acanthamoeba castellanii str. Neff	14915924
ACA1_212830	CDS	ACA1_212830	NW_004457380.1	160678	164593	R	encoded by transcript ACA1_212830A; Protein-tyrosine-phosphatase	complement(join(160678..160984,161083..161143,161276..161372,161458..162473,162578..162735,162838..162893,162989..163067,163191..163309,163375..163456,163570..163640,163713..163907,163998..164090,164175..164254,164329..164350,164425..164469,164561..164593))	Acanthamoeba castellanii str. Neff	14915846
ACA1_212840	CDS	ACA1_212840	NW_004457380.1	164811	166043	D	encoded by transcript ACA1_212840A; CROP protein	164811..166043	Acanthamoeba castellanii str. Neff	14915847
ACA1_212860	CDS	ACA1_212860	NW_004457380.1	170053	171199	D	encoded by transcript ACA1_212860A; uncharacterized protein	join(170053..170317,170425..170989,171163..171199)	Acanthamoeba castellanii str. Neff	14915849
ACA1_212970	CDS	ACA1_212970	NW_004457380.1	172116	172483	R	encoded by transcript ACA1_212970A; uncharacterized protein	complement(join(172116..172288,172387..172483))	Acanthamoeba castellanii str. Neff	14915850
ACA1_213080	CDS	ACA1_213080	NW_004457380.1	173144	174388	D	encoded by transcript ACA1_213080A; uncharacterized protein	join(173144..173186,173363..173868,174006..174097,174166..174388)	Acanthamoeba castellanii str. Neff	14915851
ACA1_213090	CDS	ACA1_213090	NW_004457380.1	175072	175354	D	encoded by transcript ACA1_213090A; uncharacterized protein	175072..>175354	Acanthamoeba castellanii str. Neff	14915852
ACA1_213200	CDS	ACA1_213200	NW_004457380.1	175558	175716	D	encoded by transcript ACA1_213200A; uncharacterized protein	175558..175716	Acanthamoeba castellanii str. Neff	14915853
ACA1_213210	CDS	ACA1_213210	NW_004457380.1	176149	176720	R	encoded by transcript ACA1_213210A; uncharacterized protein	complement(join(176149..176447,176468..176720))	Acanthamoeba castellanii str. Neff	14915854
ACA1_213320	CDS	ACA1_213320	NW_004457380.1	176970	177824	D	encoded by transcript ACA1_213320A; uncharacterized protein	join(176970..177028,177128..177332,177477..177533,177693..177824)	Acanthamoeba castellanii str. Neff	14915855
ACA1_213330	CDS	ACA1_213330	NW_004457380.1	177968	179573	R	encoded by transcript ACA1_213330A; protein C14orf124 family protein	complement(join(177968..178087,178181..178269,178340..178409,178510..178671,178773..178862,178900..178962,179067..179153,179265..179342,179451..179573))	Acanthamoeba castellanii str. Neff	14915856
ACA1_213340	CDS	ACA1_213340	NW_004457380.1	179787	180905	R	encoded by transcript ACA1_213340A; vacuolar proteinsorting-associated protein 25, putative	complement(join(179787..179840,179961..180031,180185..180260,180385..180473,180587..180640,180706..180799,180888..180905))	Acanthamoeba castellanii str. Neff	14915857
ACA1_213350	CDS	ACA1_213350	NW_004457380.1	181188	183017	D	encoded by transcript ACA1_213350A; ABC2 type transporter superfamily protein	join(181188..181472,181563..181869,182048..182110,182208..182350,182462..182845,182934..183017)	Acanthamoeba castellanii str. Neff	14915858
ACA1_213460	CDS	ACA1_213460	NW_004457380.1	183349	183540	D	encoded by transcript ACA1_213460A; uncharacterized protein	183349..>183540	Acanthamoeba castellanii str. Neff	14915859
ACA1_213570	CDS	ACA1_213570	NW_004457380.1	184295	184609	D	encoded by transcript ACA1_213570A; signal peptidase complex subunit 3b, putative	184295..>184609	Acanthamoeba castellanii str. Neff	14915860
ACA1_213790	CDS	ACA1_213790	NW_004457380.1	190573	192814	D	encoded by transcript ACA1_213790A; uncharacterized protein	join(<190573..190690,190826..190893,191168..191537,191743..191860,192002..192059,192359..192814)	Acanthamoeba castellanii str. Neff	14915862
ACA1_214000	CDS	ACA1_214000	NW_004457380.1	192902	194510	R	encoded by transcript ACA1_214000A; PH domain containing protein	complement(join(192902..193127,193243..193385,193548..193699,193778..194176,194316..194471,194483..194510))	Acanthamoeba castellanii str. Neff	14915863
ACA1_214010	CDS	ACA1_214010	NW_004457380.1	194645	197306	R	encoded by transcript ACA1_214010A; Protein-tyrosine-phosphatase	complement(join(194645..194941,195105..195164,195268..195551,195634..195942,196081..196280,196396..196586,196828..196976,197039..197306))	Acanthamoeba castellanii str. Neff	14915657
ACA1_214220	CDS	ACA1_214220	NW_004457380.1	197865	199276	R	encoded by transcript ACA1_214220A; uncharacterized protein	complement(join(197865..198353,198472..198698,198889..199152,199234..199276))	Acanthamoeba castellanii str. Neff	14915658
ACA1_214330	CDS	ACA1_214330	NW_004457380.1	199477	203092	R	encoded by transcript ACA1_214330A; uncharacterized protein	complement(join(199477..199616,199693..199781,199887..200146,200240..200332,200415..200497,200650..201148,201297..201345,201471..201550,201674..201711,201816..201938,202050..202159,202189..202216,202382..202518,202621..202715,202913..203092))	Acanthamoeba castellanii str. Neff	14915659
ACA1_214340	CDS	ACA1_214340	NW_004457380.1	205680	206986	R	encoded by transcript ACA1_214340A; hypoxanthine-guanine phosphoribosyltransferase	complement(join(205680..205789,205870..205939,206064..206183,206388..206480,206762..206986))	Acanthamoeba castellanii str. Neff	14915660
ACA1_214350	CDS	ACA1_214350	NW_004457380.1	208153	210077	D	encoded by transcript ACA1_214350A; uncharacterized protein	join(208153..208284,208321..208522,208611..208753,208831..209027,209141..209340,209419..209748,209861..209884,209986..210077)	Acanthamoeba castellanii str. Neff	14915661
ACA1_214460	CDS	ACA1_214460	NW_004457380.1	210544	211361	R	encoded by transcript ACA1_214460A; leucine rich repeat domain containing protein	complement(join(210544..210697,210784..210902,211098..211361))	Acanthamoeba castellanii str. Neff	14915662
ACA1_214570	CDS	ACA1_214570	NW_004457380.1	213473	224973	D	encoded by transcript ACA1_214570A; protein kinase domain containing protein	join(213473..213781,213874..213946,214029..214109,214221..214353,214462..214604,214667..214735,214833..215276,215372..215642,215758..216162,216273..216398,216472..216551,216636..216755,216863..216968,217079..217307,217397..217612,217703..217785,217855..217994,218097..218219,218306..218358,218447..218770,218884..219025,219123..219242,219354..219495,219572..219729,219815..219888,220006..220254,220356..220443,220523..220703,220796..220880,220976..221788,221892..222015,222129..222242,222320..222420,222517..222597,222722..223028,223106..223185,223848..223977,224051..224113,224214..224850,224910..224973)	Acanthamoeba castellanii str. Neff	14915663
ACA1_214590	CDS	ACA1_214590	NW_004457380.1	230592	231311	D	encoded by transcript ACA1_214590A; uncharacterized protein	230592..231311	Acanthamoeba castellanii str. Neff	14915665
ACA1_214600	CDS	ACA1_214600	NW_004457380.1	232054	232549	D	encoded by transcript ACA1_214600A; uncharacterized protein	join(232054..232148,232235..232379,232448..232549)	Acanthamoeba castellanii str. Neff	14915666
ACA1_214610	CDS	ACA1_214610	NW_004457380.1	232602	234616	R	encoded by transcript ACA1_214610A; aspartate aminotransferase	complement(join(232602..232726,232813..232915,232928..233000,233066..233198,233283..233447,233583..233754,233886..233992,234140..234252,234369..234403,234479..234616))	Acanthamoeba castellanii str. Neff	14915667
ACA1_214620	CDS	ACA1_214620	NW_004457380.1	234692	235130	R	encoded by transcript ACA1_214620A; riboflavin aldehydeforming enzyme, putative	complement(join(234692..234913,234990..235130))	Acanthamoeba castellanii str. Neff	14915668
ACA1_214630	CDS	ACA1_214630	NW_004457380.1	235466	238780	R	encoded by transcript ACA1_214630A; uncharacterized protein	complement(join(235466..235692,235753..236598,236733..236945,237015..237290,237380..237451,237671..237784,237865..237951,238015..238113,238171..238569,238681..238780))	Acanthamoeba castellanii str. Neff	14915669
ACA1_214640	CDS	ACA1_214640	NW_004457380.1	239405	242801	R	encoded by transcript ACA1_214640A; cobalaminindependent methionine synthase	complement(join(239405..239835,239898..240289,240387..240813,240898..241099,241183..241656,241750..241968,242138..242525,242740..242801))	Acanthamoeba castellanii str. Neff	14915670
ACA1_214850	CDS	ACA1_214850	NW_004457380.1	245396	246911	D	encoded by transcript ACA1_214850A; LIM domain containing protein	join(245396..245487,245561..245642,245742..245772,245865..245998,246063..246911)	Acanthamoeba castellanii str. Neff	14915753
ACA1_214860	CDS	ACA1_214860	NW_004457380.1	247577	248702	D	encoded by transcript ACA1_214860A; uncharacterized protein	join(247577..247597,247682..247770,247958..248066,248187..248270,248353..248383,248479..248525,248601..248702)	Acanthamoeba castellanii str. Neff	14915754
ACA1_214870	CDS	ACA1_214870	NW_004457380.1	248856	252466	D	encoded by transcript ACA1_214870A; inositol polyphosphate5-phosphatase, 75kDa, putative	join(248856..249061,249155..249253,249264..249291,249373..249459,249576..249692,249794..249963,250078..250186,250252..250625,250702..250750,250840..250926,251007..251127,251209..251279,251355..251429,251532..251579,251677..251764,251860..251978,252077..252197,252339..252466)	Acanthamoeba castellanii str. Neff	14915755
ACA1_214880	CDS	ACA1_214880	NW_004457380.1	252806	261928	D	encoded by transcript ACA1_214880A; protein kinase domain containing protein	join(252806..252986,253130..253542,253731..253921,254046..254248,254349..254684,254764..254999,255068..255127,255214..255499,255598..255747,255817..255888,255957..256439,256542..256812,256875..257255,257345..257470,257543..257631,257725..257838,257905..258010,258104..258211,258300..258636,258725..258807,258902..259041,259119..259244,259341..259393,259477..259568,259692..259975,260137..260449,260529..260866,260968..261379,261448..261928)	Acanthamoeba castellanii str. Neff	14915756
ACA1_214890	CDS	ACA1_214890	NW_004457380.1	262277	264287	D	encoded by transcript ACA1_214890A; peptidase, S54 family protein	join(262277..262697,262783..262914,263045..263137,263321..263443,263584..263721,263813..263952,264030..264287)	Acanthamoeba castellanii str. Neff	14915757
ACA1_214900	CDS	ACA1_214900	NW_004457380.1	264388	265056	R	encoded by transcript ACA1_214900A; uncharacterized protein	complement(join(264388..264627,264736..265056))	Acanthamoeba castellanii str. Neff	14915758
ACA1_214910	CDS	ACA1_214910	NW_004457380.1	265259	265761	R	encoded by transcript ACA1_214910A; expansin family protein	complement(join(265259..265369,265434..265520,265609..265761))	Acanthamoeba castellanii str. Neff	14915759
ACA1_214920	CDS	ACA1_214920	NW_004457380.1	266370	266907	D	encoded by transcript ACA1_214920A; uncharacterized protein	join(266370..266435,266536..266907)	Acanthamoeba castellanii str. Neff	14915760
ACA1_214930	CDS	ACA1_214930	NW_004457380.1	267138	267916	D	encoded by transcript ACA1_214930A; uncharacterized protein	join(267138..267444,267493..267609,267768..267916)	Acanthamoeba castellanii str. Neff	14915761
ACA1_214940	CDS	ACA1_214940	NW_004457380.1	268035	270892	R	encoded by transcript ACA1_214940A; leucine rich repeat domain containing protein	complement(join(268035..268118,268221..268299,268386..268563,268671..268869,268989..269204,269296..269391,269507..269745,269844..269962,270065..270213,270354..270400,270529..270624,270730..270892))	Acanthamoeba castellanii str. Neff	14915762
ACA1_214950	CDS	ACA1_214950	NW_004457380.1	271033	271341	D	encoded by transcript ACA1_214950A; uncharacterized protein	<271033..271341	Acanthamoeba castellanii str. Neff	14915763
ACA1_214960	CDS	ACA1_214960	NW_004457380.1	274939	275764	D	encoded by transcript ACA1_214960A; uncharacterized protein	join(274939..275393,275446..275764)	Acanthamoeba castellanii str. Neff	14915764
ACA1_214970	CDS	ACA1_214970	NW_004457380.1	275949	284010	R	encoded by transcript ACA1_214970A; SNF2 family Nterminal domain containing protein	complement(join(275949..276641,276743..276869,276973..277038,277115..277237,277335..277790,277877..278270,278368..278449,278538..279403,279494..279676,279742..279926,279992..280071,280132..280287,280350..280717,280795..280883,280964..281082,281192..281534,281721..281782,281903..282150,282279..282390,282522..282850,282960..283058,283131..284010))	Acanthamoeba castellanii str. Neff	14915765
ACA1_214980	CDS	ACA1_214980	NW_004457380.1	284408	285691	D	encoded by transcript ACA1_214980A; HAD hydrolase, family IA, variant 3 subfamily protein	join(284408..284495,284567..284636,284822..284892,284989..285095,285210..285266,285345..285452,285548..285691)	Acanthamoeba castellanii str. Neff	14915711
ACA1_214990	CDS	ACA1_214990	NW_004457380.1	285878	288729	R	encoded by transcript ACA1_214990A; uncharacterized protein	complement(join(285878..285967,286042..286192,286210..286235,286319..286387,286464..286596,286812..287230,287341..287864,288000..288729))	Acanthamoeba castellanii str. Neff	14915712
ACA1_215000	CDS	ACA1_215000	NW_004457380.1	288965	291641	R	encoded by transcript ACA1_215000A; GATA zinc finger domain containing protein	complement(join(288965..289259,289337..289434,289499..290302,290445..290519,290616..291641))	Acanthamoeba castellanii str. Neff	14915713
ACA1_215010	CDS	ACA1_215010	NW_004457380.1	292551	294029	R	encoded by transcript ACA1_215010A; inorganic diphosphatase	complement(join(292551..292569,292745..292830,292974..293155,293228..293378,293462..293527,293615..293672,293743..293845,293969..294029))	Acanthamoeba castellanii str. Neff	14915714
ACA1_215020	CDS	ACA1_215020	NW_004457380.1	294823	296376	D	encoded by transcript ACA1_215020A; variant sh3 domain containing protein	join(294823..294897,295043..295211,295364..296376)	Acanthamoeba castellanii str. Neff	14915715
ACA1_215030	CDS	ACA1_215030	NW_004457380.1	296900	299042	R	encoded by transcript ACA1_215030A; uncharacterized protein	complement(join(296900..297226,297301..297418,297544..297634,297782..297884,298060..298143,298243..298394,298453..298667,298754..298829,299009..299042))	Acanthamoeba castellanii str. Neff	14915716
ACA1_215050	CDS	ACA1_215050	NW_004457380.1	302426	308043	R	encoded by transcript ACA1_215050A; C2 domain containing protein	complement(join(302426..302514,302621..302676,302775..302892,302970..303182,303271..303385,303467..303538,303622..303704,303803..303937,304043..304244,304343..304414,304590..304669,304777..304831,304973..305099,305216..305298,305406..305587,305668..305746,305846..305894,305968..306049,306142..306260,306376..306452,306530..306620,306707..306823,306920..306954,307044..307135,307247..307316,307396..307470,307583..307663,307774..307848,307939..308043))	Acanthamoeba castellanii str. Neff	14915718
ACA1_215070	CDS	ACA1_215070	NW_004457380.1	310417	313637	R	encoded by transcript ACA1_215070A; RasGEF domain containing protein	complement(join(310417..310495,310594..310670,310789..310919,311047..311170,311296..311478,311838..311987,312111..312456,312545..312628,312711..312792,312897..312960,313062..313500,313597..313637))	Acanthamoeba castellanii str. Neff	14915720
ACA1_215080	CDS	ACA1_215080	NW_004457380.1	313847	323078	R	encoded by transcript ACA1_215080A; uncharacterized protein	complement(join(313847..313988,314083..314153,314237..314466,314767..314850,314955..315800,316046..316206,316359..316390,316476..316544,316650..316783,316917..317397,317436..317639,317716..317846,317944..318100,318181..318283,318394..318518,318601..318741,318819..318869,318958..319066,319236..319366,319609..319687,319780..319864,319957..320126,320285..320414,320509..320556,320636..320800,320889..320993,321084..321208,321319..321377,321467..321522,321601..321659,321760..323078))	Acanthamoeba castellanii str. Neff	14915721
ACA1_215290	CDS	ACA1_215290	NW_004457380.1	323538	324709	D	encoded by transcript ACA1_215290A; uncharacterized protein	join(323538..323592,323668..323772,323888..323926,324131..324216,324650..324709)	Acanthamoeba castellanii str. Neff	14915722
ACA1_215300	CDS	ACA1_215300	NW_004457380.1	325117	330305	D	encoded by transcript ACA1_215300A; Phosphatidylinositol4-phosphate 5-Kinase protein	join(325117..325122,325352..325435,325561..325629,325742..325915,326034..326131,326247..326302,326412..326482,326580..326728,326876..326987,327109..327173,327267..327342,327447..327526,327673..327778,327885..328052,328214..328360,328456..328536,328654..328728,328853..329159,329320..329761,329920..330049,330210..330305)	Acanthamoeba castellanii str. Neff	14915768
ACA1_215310	CDS	ACA1_215310	NW_004457380.1	330427	332368	D	encoded by transcript ACA1_215310A; uncharacterized protein	join(330427..330586,330705..330804,330913..331188,331356..331582,331702..332290,332359..332368)	Acanthamoeba castellanii str. Neff	14915769
ACA1_215420	CDS	ACA1_215420	NW_004457380.1	332670	333038	R	encoded by transcript ACA1_215420A; dihydro-6-hydroxymethylpterin pyrophosphokinase (HPPK), putative	complement(<332670..333038)	Acanthamoeba castellanii str. Neff	14915770
ACA1_215430	CDS	ACA1_215430	NW_004457380.1	333785	334521	R	encoded by transcript ACA1_215430A; uncharacterized protein	complement(join(333785..333859,334049..334169,334281..334329,334404..334521))	Acanthamoeba castellanii str. Neff	14915771
ACA1_215440	CDS	ACA1_215440	NW_004457380.1	334731	336586	R	encoded by transcript ACA1_215440A; uncharacterized protein	complement(join(334731..335281,335369..335602,335726..335861,335969..336130,336191..336438,336547..336586))	Acanthamoeba castellanii str. Neff	14915772
ACA1_215450	CDS	ACA1_215450	NW_004457380.1	336769	337650	R	encoded by transcript ACA1_215450A; uncharacterized protein	complement(join(336769..337080,337174..337650))	Acanthamoeba castellanii str. Neff	14915773
ACA1_215460	CDS	ACA1_215460	NW_004457380.1	338151	339002	R	encoded by transcript ACA1_215460A; cyclophylin, putative	complement(join(338151..338326,338404..338619,338679..338733,338934..339002))	Acanthamoeba castellanii str. Neff	14915774
ACA1_215470	CDS	ACA1_215470	NW_004457380.1	339237	341234	D	encoded by transcript ACA1_215470A; din-acetylchitobiase 2, putative	join(339237..339430,339532..339675,339749..339949,340115..340250,340370..340431,340551..340637,340764..340841,340927..341057,341143..341234)	Acanthamoeba castellanii str. Neff	14915775
ACA1_215480	CDS	ACA1_215480	NW_004457380.1	341542	343465	D	encoded by transcript ACA1_215480A; FHA domain containing protein	join(341542..341548,341602..341733,341831..341912,342001..342076,342199..342339,342437..342722,342743..342813,342912..343037,343136..343287,343375..343465)	Acanthamoeba castellanii str. Neff	14915776
ACA1_215490	CDS	ACA1_215490	NW_004457380.1	343661	345354	R	encoded by transcript ACA1_215490A; serine/threonine protein kinase 6, putative	complement(join(343661..343773,344192..344316,344475..344623,344717..344788,344884..344950,345011..345354))	Acanthamoeba castellanii str. Neff	14915777
ACA1_215600	CDS	ACA1_215600	NW_004457380.1	345522	348325	R	encoded by transcript ACA1_215600A; uncharacterized protein	complement(join(345522..345624,345695..345915,346039..346182,346236..346329,346456..346941,347015..347256,347382..347754,347864..348006,348146..348325))	Acanthamoeba castellanii str. Neff	14915778
ACA1_215610	CDS	ACA1_215610	NW_004457380.1	348555	349383	R	encoded by transcript ACA1_215610A; acetyltransferase, GNAT superfamily protein	complement(join(348555..348800,348899..348994,349114..349383))	Acanthamoeba castellanii str. Neff	14915779
ACA1_215620	CDS	ACA1_215620	NW_004457380.1	349845	350993	R	encoded by transcript ACA1_215620A; Rasrelated GTPase	complement(join(349845..350110,350224..350379,350488..350577,350682..350726,350930..350993))	Acanthamoeba castellanii str. Neff	14915780
ACA1_215630	CDS	ACA1_215630	NW_004457380.1	351357	352595	R	encoded by transcript ACA1_215630A; dual specificity phosphatase, catalytic domain containing protein	complement(join(351357..351366,351597..351698,351821..351945,352076..352148,352270..352383,352453..352595))	Acanthamoeba castellanii str. Neff	14915781
ACA1_215640	CDS	ACA1_215640	NW_004457380.1	352818	362307	D	encoded by transcript ACA1_215640A; GRAM domain containing protein	join(352818..352906,353096..353205,353341..353420,353502..353720,353873..353947,354058..354171,354263..354337,354446..354520,354675..354743,354881..354954,355019..355061,355225..355255,355328..355408,355502..355611,355697..355782,355888..356025,356140..356266,356358..356511,356625..356761,356895..357014,357127..357190,357285..357423,357560..357733,357844..357946,358025..358096,358204..358302,358455..358547,358631..358798,358924..358998,359106..359210,359387..359481,359616..359754,359845..360034,360134..360213,360289..360360,360473..360569,360717..360847,361064..361114,361211..361407,361571..361665,361769..361869,361974..362072,362194..362307)	Acanthamoeba castellanii str. Neff	14915686
ACA1_215650	CDS	ACA1_215650	NW_004457380.1	362851	363799	D	encoded by transcript ACA1_215650A; uncharacterized protein	join(362851..363387,363513..363737,363761..363799)	Acanthamoeba castellanii str. Neff	14915687
ACA1_215660	CDS	ACA1_215660	NW_004457380.1	364123	372064	R	encoded by transcript ACA1_215660A; chromo' (CHRromatin Organization MOdifier) domain containing protein	complement(join(364123..364278,364370..364456,364603..364663,364795..364911,365367..365883,365904..366519,366598..366684,366838..366932,367000..367093,367203..367262,367453..367557,367653..367733,367861..368619,368727..368865,369006..369103,369224..369312,369473..369554,369682..369758,369868..369987,370075..370169,370267..370364,370659..370744,370854..370939,371062..371125,371192..371258,371391..371479,371587..371650,371734..371803,371877..371962,372044..372064))	Acanthamoeba castellanii str. Neff	14915688
ACA1_215680	CDS	ACA1_215680	NW_004457380.1	375244	375639	R	encoded by transcript ACA1_215680A; uncharacterized protein	complement(375244..375639)	Acanthamoeba castellanii str. Neff	14915690
ACA1_215690	CDS	ACA1_215690	NW_004457380.1	375738	379185	R	encoded by transcript ACA1_215690A; bromodomain domain containing protein	complement(join(375738..376013,376108..376233,376445..376557,376663..376783,376879..377259,377337..377830,377942..378212,378388..378525,378630..378683,378838..379185))	Acanthamoeba castellanii str. Neff	14915691
ACA1_215700	CDS	ACA1_215700	NW_004457380.1	379692	380728	R	encoded by transcript ACA1_215700A; uncharacterized protein	complement(join(379692..379865,379938..380332,380452..380728))	Acanthamoeba castellanii str. Neff	14915692
ACA1_215710	CDS	ACA1_215710	NW_004457380.1	381527	381886	D	encoded by transcript ACA1_215710A; uncharacterized protein	join(381527..381686,381750..381886)	Acanthamoeba castellanii str. Neff	14915693
ACA1_215720	CDS	ACA1_215720	NW_004457380.1	382176	382926	D	encoded by transcript ACA1_215720A; glutathione transferase subfamily protein	join(382176..382448,382513..382926)	Acanthamoeba castellanii str. Neff	14915694
ACA1_215730	CDS	ACA1_215730	NW_004457380.1	384361	385333	D	encoded by transcript ACA1_215730A; Hypothetical protein	join(384361..384498,384584..384652,384701..385333)	Acanthamoeba castellanii str. Neff	14915695
ACA1_215740	CDS	ACA1_215740	NW_004457380.1	385424	385985	R	encoded by transcript ACA1_215740A; uncharacterized protein	complement(join(385424..385678,385707..385985))	Acanthamoeba castellanii str. Neff	14915696
ACA1_215750	CDS	ACA1_215750	NW_004457380.1	386621	388006	D	encoded by transcript ACA1_215750A; CBS domain containing protein	join(386621..386768,386856..387027,387129..387421,387520..387576,387696..387805,387884..388006)	Acanthamoeba castellanii str. Neff	14915697
ACA1_215760	CDS	ACA1_215760	NW_004457380.1	388176	390684	D	encoded by transcript ACA1_215760A; Fbox domain containing protein	join(388176..388208,388299..388359,388496..388721,388854..389046,389156..389240,389381..389614,389692..389836,389986..390091,390168..390272,390412..390684)	Acanthamoeba castellanii str. Neff	14915698
ACA1_215770	CDS	ACA1_215770	NW_004457380.1	391264	391943	R	encoded by transcript ACA1_215770A; dual specificity phosphatase, catalytic domain containing protein	complement(join(391264..391372,391443..391537,391627..391724,391787..391943))	Acanthamoeba castellanii str. Neff	14915633
ACA1_215780	CDS	ACA1_215780	NW_004457380.1	392620	395371	D	encoded by transcript ACA1_215780A; uncharacterized protein	join(392620..392729,392839..392906,392994..393144,393278..393488,393609..393777,393853..393928,394025..394188,394298..394692,395067..395130,395238..395371)	Acanthamoeba castellanii str. Neff	14915634
ACA1_215790	CDS	ACA1_215790	NW_004457380.1	395624	399414	D	encoded by transcript ACA1_215790A; copper/zinc superoxide dismutase	join(395624..395699,395790..395881,395960..396025,396142..396255,396339..396412,396495..396625,396751..396851,396985..397053,397165..397368,397464..397518,397639..397706,397933..398078,398193..398229,398651..398854,398946..399000,399233..399414)	Acanthamoeba castellanii str. Neff	14915635
ACA1_215900	CDS	ACA1_215900	NW_004457380.1	400362	401454	D	encoded by transcript ACA1_215900A; RAP1A, member of RAS oncogene family	join(400362..400405,400525..400593,400861..401108,401222..401454)	Acanthamoeba castellanii str. Neff	14915636
ACA1_215910	CDS	ACA1_215910	NW_004457380.1	401770	404536	D	encoded by transcript ACA1_215910A; sterol desaturaserelated protein	join(401770..401846,401907..402112,402213..402319,402417..402617,402646..402718,402833..402952,403073..403230,403345..403450,403558..403693,403802..403867,403950..404033,404126..404205,404310..404536)	Acanthamoeba castellanii str. Neff	14915637
ACA1_215920	CDS	ACA1_215920	NW_004457380.1	405465	408841	D	encoded by transcript ACA1_215920A; SH3 domain containing protein	join(405465..405488,405565..405644,405759..405830,405953..406016,406193..406273,406399..406539,406707..406835,406980..407099,407242..407302,407372..407455,407552..407611,407752..407819,407965..408081,408160..408234,408328..408444,408534..408625,408769..408841)	Acanthamoeba castellanii str. Neff	14915638
ACA1_215930	CDS	ACA1_215930	NW_004457380.1	409021	411322	R	encoded by transcript ACA1_215930A; uncharacterized protein	complement(join(409021..409388,409487..409601,409711..409779,409902..410082,410157..410245,410417..410511,410600..410759,410919..411085,411202..411322))	Acanthamoeba castellanii str. Neff	14915639
ACA1_215940	CDS	ACA1_215940	NW_004457380.1	411433	413829	D	encoded by transcript ACA1_215940A; uncharacterized protein	join(411433..411622,411782..411865,412031..412134,412279..412499,412664..412724,412820..413015,413141..413243,413501..413595,413681..413829)	Acanthamoeba castellanii str. Neff	14915640
ACA1_215950	CDS	ACA1_215950	NW_004457380.1	414037	414686	D	encoded by transcript ACA1_215950A; uncharacterized protein	join(414037..414126,414217..414440,414566..414686)	Acanthamoeba castellanii str. Neff	14915641
ACA1_215960	CDS	ACA1_215960	NW_004457380.1	414911	417220	D	encoded by transcript ACA1_215960A; uncharacterized protein	join(414911..415865,415943..415994,416038..416183,416322..416948,417024..417220)	Acanthamoeba castellanii str. Neff	14915642
ACA1_215970	CDS	ACA1_215970	NW_004457380.1	417308	422009	R	encoded by transcript ACA1_215970A; EGFlike domain containing protein	complement(join(417308..417444,417529..417654,417801..418028,418158..418277,418363..418506,418599..418669,418751..418943,418984..419093,419168..419297,419372..419515,419567..419689,419789..419899,419985..420110,420212..420315,420379..420598,420691..420799,420925..420997,421119..421221,421293..421425,421590..421765,421889..422009))	Acanthamoeba castellanii str. Neff	14915643
ACA1_215980	CDS	ACA1_215980	NW_004457380.1	422291	423938	R	encoded by transcript ACA1_215980A; adhesion regulating molecule region protein, putative	complement(join(422291..423045,423141..423333,423435..423640,423896..423938))	Acanthamoeba castellanii str. Neff	14915644
ACA1_215990	CDS	ACA1_215990	NW_004457380.1	424041	427792	D	encoded by transcript ACA1_215990A; uncharacterized protein	join(424041..424144,424227..424440,424553..424621,424706..424786,424860..424925,425041..425578,425692..425792,425870..426307,426389..426498,426636..426738,426775..426822,426935..427226,427294..427349,427445..427555,427661..427792)	Acanthamoeba castellanii str. Neff	14915620
ACA1_216000	CDS	ACA1_216000	NW_004457380.1	428552	431339	D	encoded by transcript ACA1_216000A; uncharacterized protein	join(428552..428683,428763..428947,429036..429088,429179..429339,429450..429524,429673..429809,429929..430090,430229..430353,430673..430822,431152..431339)	Acanthamoeba castellanii str. Neff	14915621
ACA1_216010	CDS	ACA1_216010	NW_004457380.1	431456	432261	R	encoded by transcript ACA1_216010A; uncharacterized protein	complement(join(431456..431764,431851..432261))	Acanthamoeba castellanii str. Neff	14915622
ACA1_216020	CDS	ACA1_216020	NW_004457380.1	432543	434922	R	encoded by transcript ACA1_216020A; cudA family protein	complement(join(432543..432652,432757..432830,432983..433339,433461..433490,433597..433682,433844..433936,434051..434268,434372..434481,434586..434653,434791..434922))	Acanthamoeba castellanii str. Neff	14915623
ACA1_216030	CDS	ACA1_216030	NW_004457380.1	437004	439886	D	encoded by transcript ACA1_216030A; transcription factor WRKY23, putative	437004..439886	Acanthamoeba castellanii str. Neff	14915624
ACA1_216040	CDS	ACA1_216040	NW_004457380.1	440284	444620	R	encoded by transcript ACA1_216040A; protein kinase domain containing protein	complement(join(440284..440359,440467..440525,440648..440784,440911..440982,441184..441277,441368..441468,441585..441658,441796..441875,441967..442024,442113..442260,442464..442518,442725..442804,442904..442944,443037..443783,444050..444281,444399..444450,444549..>444620))	Acanthamoeba castellanii str. Neff	14915625
ACA1_216050	CDS	ACA1_216050	NW_004457380.1	444991	449498	D	encoded by transcript ACA1_216050A; RNase3 domain containing protein	join(444991..445147,445220..445334,445433..445661,445743..445836,445957..446125,446235..446480,446594..446859,447151..447299,447412..447540,447635..447995,448145..448224,448410..448646,448745..448901,449016..449275,449361..449498)	Acanthamoeba castellanii str. Neff	14915626
ACA1_216060	CDS	ACA1_216060	NW_004457380.1	449727	450533	D	encoded by transcript ACA1_216060A; uncharacterized protein	join(449727..450140,450225..450533)	Acanthamoeba castellanii str. Neff	14915627
ACA1_216070	CDS	ACA1_216070	NW_004457380.1	450672	453600	R	encoded by transcript ACA1_216070A; selenide, water dikinase	complement(join(450672..450786,450914..450990,451110..451189,451358..451427,451558..451616,451691..451853,452063..452378,452516..452613,452732..452827,452992..453288,453316..453395,453498..453600))	Acanthamoeba castellanii str. Neff	14915628
ACA1_216080	CDS	ACA1_216080	NW_004457380.1	453711	456331	R	encoded by transcript ACA1_216080A; aminotransferase class V, putative	complement(join(453711..453781,453944..454001,454118..454191,454394..454526,454695..455002,455177..455291,455426..455507,455628..455710,455831..455911,456012..456066,456159..456331))	Acanthamoeba castellanii str. Neff	14915629
ACA1_216190	CDS	ACA1_216190	NW_004457380.1	458099	460674	R	encoded by transcript ACA1_216190A; protein kinase domain containing protein	complement(join(458099..458211,458311..458412,458489..458613,458769..458905,459136..459317,459442..459665,459843..459973,460086..460510,460566..460674))	Acanthamoeba castellanii str. Neff	14915630
ACA1_216300	CDS	ACA1_216300	NW_004457380.1	461233	465361	D	encoded by transcript ACA1_216300A; Ras family protein	join(461233..461309,461451..461568,461773..461860,462046..462143,462217..462311,462349..462514,462644..462686,462828..463300,463434..463495,463633..463728,463952..464725,464884..464953,465110..465361)	Acanthamoeba castellanii str. Neff	14915631
ACA1_216310	CDS	ACA1_216310	NW_004457380.1	465821	465994	R	encoded by transcript ACA1_216310A; uncharacterized protein	complement(465821..>465994)	Acanthamoeba castellanii str. Neff	14915632
ACA1_216320	CDS	ACA1_216320	NW_004457380.1	466509	469061	D	encoded by transcript ACA1_216320A; homogentisate 1,2dioxygenase	join(466509..466607,466720..466814,466956..467095,467235..467384,467534..467616,467726..467825,467909..468030,468137..468241,468354..468514,468623..468730,468893..469061)	Acanthamoeba castellanii str. Neff	14915645
ACA1_216330	CDS	ACA1_216330	NW_004457380.1	469556	471705	D	encoded by transcript ACA1_216330A; uncharacterized protein	join(469556..470543,470702..470796,470910..470978,471098..471264,471338..471364,471447..471705)	Acanthamoeba castellanii str. Neff	14915646
ACA1_216340	CDS	ACA1_216340	NW_004457380.1	471837	474411	D	encoded by transcript ACA1_216340A; purinergic receptor, putative	join(471837..471855,471922..472103,472262..472378,472539..472566,472627..472787,472913..473008,473241..473280,473460..473642,473791..473876,474223..474325,474365..474411)	Acanthamoeba castellanii str. Neff	14915647
ACA1_216350	CDS	ACA1_216350	NW_004457380.1	474689	478156	D	encoded by transcript ACA1_216350A; EF hand domain containing protein	join(474689..474752,474834..474910,474987..475061,475188..475326,475403..475487,475907..475979,476123..476575,476673..476722,476904..477093,477259..477336,477457..477616,477686..477836,478135..478156)	Acanthamoeba castellanii str. Neff	14915648
ACA1_216360	CDS	ACA1_216360	NW_004457380.1	478353	479817	D	encoded by transcript ACA1_216360A; uridine kinase	join(478353..478469,478629..478716,478935..478998,479097..479184,479278..479349,479474..479539,479698..479817)	Acanthamoeba castellanii str. Neff	14915649
ACA1_216370	CDS	ACA1_216370	NW_004457380.1	480013	482802	D	encoded by transcript ACA1_216370A; uridine kinase	join(480013..480135,480302..480389,480537..480600,480699..480801,480941..481151,481266..481321,481478..481582,481706..481799,481994..482404,482552..482802)	Acanthamoeba castellanii str. Neff	14915650
ACA1_216380	CDS	ACA1_216380	NW_004457380.1	483002	485231	D	encoded by transcript ACA1_216380A; mitochondrial inner membrane magnesium transporter lpe10, putative	join(483002..483140,483254..483453,483623..483816,484226..484457,484585..484653,484720..484815,484870..485025,485106..485231)	Acanthamoeba castellanii str. Neff	14915651
ACA1_216390	CDS	ACA1_216390	NW_004457380.1	487449	491373	R	encoded by transcript ACA1_216390A; MIF4G domain containing protein	complement(join(487449..487487,487549..487659,487779..487983,488077..488189,488321..488523,488603..488681,488817..488966,489159..489397,489515..489629,489799..489868,490050..490171,490290..490553,490628..490786,490880..490988,491115..491184,491304..491373))	Acanthamoeba castellanii str. Neff	14915652
ACA1_216400	CDS	ACA1_216400	NW_004457380.1	491541	492389	R	encoded by transcript ACA1_216400A; uncharacterized protein	complement(join(491541..491578,491604..491697,491871..492136,492167..492389))	Acanthamoeba castellanii str. Neff	14915653
ACA1_216410	CDS	ACA1_216410	NW_004457380.1	492799	493346	D	encoded by transcript ACA1_216410A; uncharacterized protein	join(492799..492835,493144..493296,493333..493346)	Acanthamoeba castellanii str. Neff	14915654
ACA1_216420	CDS	ACA1_216420	NW_004457380.1	493805	497927	R	encoded by transcript ACA1_216420A; leucine rich repeat domain containing protein	complement(join(493805..493876,493997..494164,494179..494364,494483..494622,494749..494791,495072..495142,495293..495835,495924..496035,496140..496252,496458..496677,496740..496886,497135..497263,497388..497448,497573..497675,497909..497927))	Acanthamoeba castellanii str. Neff	14915655
ACA1_216430	CDS	ACA1_216430	NW_004457380.1	498404	503550	D	encoded by transcript ACA1_216430A; ubiquitin specific peptidase 38, putative	join(498404..498508,498519..498593,498645..498699,498838..498932,499121..499186,499279..499418,499510..499644,499673..499702,499756..499856,499999..500157,500256..500612,500760..500841,501027..501076,501196..501314,501492..501595,501739..501855,501975..502104,502190..502348,502422..502571,502673..502799,502912..503284,503436..503550)	Acanthamoeba castellanii str. Neff	14915656
ACA1_216440	CDS	ACA1_216440	NW_004457380.1	503742	508654	D	encoded by transcript ACA1_216440A; protein phosphatase 2C domain containing protein	join(503742..503906,503980..504079,504159..504220,504340..504549,504679..504737,504868..504933,505077..505206,505331..505392,505520..505610,505745..505822,506236..506314,506438..506645,506828..506924,507039..507095,507330..507425,507553..507618,507871..507929,508050..508173,508303..508428,508508..508654)	Acanthamoeba castellanii str. Neff	14915810
ACA1_216450	CDS	ACA1_216450	NW_004457380.1	508822	510543	R	encoded by transcript ACA1_216450A; maintenance of killer 16 (mak16) protein, putative	complement(join(508822..508884,508959..509038,509202..509280,509394..509507,509635..509856,509968..510086,510266..510384,510482..510543))	Acanthamoeba castellanii str. Neff	14915811
ACA1_216460	CDS	ACA1_216460	NW_004457380.1	510716	511732	R	encoded by transcript ACA1_216460A; formyl transferase, c-terminal domain containing protein	complement(join(510716..510822,510983..511278,511447..511541,511724..511732))	Acanthamoeba castellanii str. Neff	14915812
ACA1_216570	CDS	ACA1_216570	NW_004457380.1	512212	512729	D	encoded by transcript ACA1_216570A; uncharacterized protein	join(512212..512365,512506..>512729)	Acanthamoeba castellanii str. Neff	14915813
ACA1_216680	CDS	ACA1_216680	NW_004457380.1	513102	513769	D	encoded by transcript ACA1_216680A; uncharacterized protein	join(513102..513108,513223..513323,513429..513527,513656..513769)	Acanthamoeba castellanii str. Neff	14915814
ACA1_216690	CDS	ACA1_216690	NW_004457380.1	514610	514950	D	encoded by transcript ACA1_216690A; uncharacterized protein	514610..>514950	Acanthamoeba castellanii str. Neff	14915815
ACA1_216800	CDS	ACA1_216800	NW_004457380.1	515102	516195	R	encoded by transcript ACA1_216800A; Methionyl-tRNA formyltransferase	complement(join(515102..515379,515498..515608,515751..516195))	Acanthamoeba castellanii str. Neff	14915816
ACA1_216810	CDS	ACA1_216810	NW_004457380.1	516379	518440	D	encoded by transcript ACA1_216810A; SAP domain containing protein	join(516379..516413,516600..517446,517531..518265,518417..518440)	Acanthamoeba castellanii str. Neff	14915817
ACA1_216820	CDS	ACA1_216820	NW_004457380.1	518529	522539	D	encoded by transcript ACA1_216820A; regulator of chromosome condensation (RCC1) repeat domain containing protein	join(518529..518589,518660..518693,518789..518879,519034..519081,519201..519286,519426..519475,519553..519644,519802..519985,520139..520228,520395..520501,520577..520628,520876..520996,521142..521205,521238..521288,521380..521473,521647..521751,521888..521963,522061..522180,522275..522385,522476..522539)	Acanthamoeba castellanii str. Neff	14915818
ACA1_216930	CDS	ACA1_216930	NW_004457380.1	522656	525241	R	encoded by transcript ACA1_216930A; Rab11/RabAfamily small GTPase	complement(join(522656..522711,522815..522864,523002..523049,523214..523268,523421..523466,523897..523948,524081..524135,524344..524397,524858..524926,525041..525067,525193..525241))	Acanthamoeba castellanii str. Neff	14915819
ACA1_217140	CDS	ACA1_217140	NW_004457380.1	525437	526509	D	encoded by transcript ACA1_217140A; uncharacterized protein	join(525437..525585,525698..525830,525931..526026,526154..526271,526403..526509)	Acanthamoeba castellanii str. Neff	14915820
ACA1_217150	CDS	ACA1_217150	NW_004457380.1	527456	530955	R	encoded by transcript ACA1_217150A; protein kinase domain containing protein	complement(join(527456..527597,527702..527957,528045..528171,528252..528500,528667..528849,528953..529090,529210..529287,529365..529493,529573..529714,529813..529872,529992..530154,530481..530955))	Acanthamoeba castellanii str. Neff	14915821
ACA1_217160	CDS	ACA1_217160	NW_004457380.1	531262	532417	D	encoded by transcript ACA1_217160A; uncharacterized protein	join(531262..531331,531393..531480,531611..531717,531871..531917,532076..532181,532299..532417)	Acanthamoeba castellanii str. Neff	14915822
ACA1_217170	CDS	ACA1_217170	NW_004457380.1	532660	535162	R	encoded by transcript ACA1_217170A; Microfibrillar associated protein	complement(join(532660..532859,532939..533073,533173..533309,533382..533485,533607..533762,533923..534108,534154..534373,534517..534596,534679..535017,535124..535162))	Acanthamoeba castellanii str. Neff	14915738
ACA1_217180	CDS	ACA1_217180	NW_004457380.1	535606	538524	D	encoded by transcript ACA1_217180A; uncharacterized protein	join(535606..536230,536386..536572,536690..536780,536824..536946,537090..537243,537342..537412,537526..537652,537772..537863,537959..538180,538279..538524)	Acanthamoeba castellanii str. Neff	14915739
ACA1_217190	CDS	ACA1_217190	NW_004457380.1	538740	539655	R	encoded by transcript ACA1_217190A; uncharacterized protein	complement(join(538740..538924,539006..539105,539244..539339,539413..539477,539538..539655))	Acanthamoeba castellanii str. Neff	14915740
ACA1_217200	CDS	ACA1_217200	NW_004457380.1	539996	540679	D	encoded by transcript ACA1_217200A; glutathione transferase subfamily protein	539996..540679	Acanthamoeba castellanii str. Neff	14915741
ACA1_217210	CDS	ACA1_217210	NW_004457380.1	540870	542256	R	encoded by transcript ACA1_217210A; mitochondrial import receptor subunit tom40, putative	complement(join(540870..541415,541522..541683,541785..541939,542034..542256))	Acanthamoeba castellanii str. Neff	14915742
ACA1_217220	CDS	ACA1_217220	NW_004457380.1	542457	544642	R	encoded by transcript ACA1_217220A; Vacuolar sorting protein 9 (VPS9) domain containing protein	complement(join(542457..542636,542679..542853,542955..543092,543234..543351,543447..543524,543652..543791,543902..544087,544216..544492,544558..544642))	Acanthamoeba castellanii str. Neff	14915743
ACA1_217230	CDS	ACA1_217230	NW_004457380.1	545497	548311	D	encoded by transcript ACA1_217230A; RasGEF domain containing protein	join(545497..545769,545853..546069,546107..546265,546374..546452,546552..546960,547103..547213,547351..547506,547617..547875,548000..548118,548219..548311)	Acanthamoeba castellanii str. Neff	14915744
ACA1_217240	CDS	ACA1_217240	NW_004457380.1	548549	549678	D	encoded by transcript ACA1_217240A; uncharacterized protein	join(548549..548611,548715..548870,549005..549152,549201..549387,549486..549678)	Acanthamoeba castellanii str. Neff	14915745
ACA1_217260	CDS	ACA1_217260	NW_004457380.1	550970	554151	R	encoded by transcript ACA1_217260A; GTPbinding protein TypA/BipA, putative	complement(join(550970..551076,551174..551629,551728..551930,552050..552169,552242..552326,552421..552614,552715..552793,552921..553071,553216..553403,553546..553645,553791..554058,554075..554151))	Acanthamoeba castellanii str. Neff	14915747
ACA1_217270	CDS	ACA1_217270	NW_004457380.1	554771	555301	R	encoded by transcript ACA1_217270A; uncharacterized protein	complement(join(554771..554829,554953..555301))	Acanthamoeba castellanii str. Neff	14915748
ACA1_217280	CDS	ACA1_217280	NW_004457380.1	556134	559568	D	encoded by transcript ACA1_217280A; protein kinase domain containing protein	join(556134..556192,556296..556649,556750..556787,556897..556973,557127..557246,557374..557517,557616..557714,557828..558298,558380..558582,558653..558803,559230..559568)	Acanthamoeba castellanii str. Neff	14915749
ACA1_217290	CDS	ACA1_217290	NW_004457380.1	560501	561793	R	encoded by transcript ACA1_217290A; uncharacterized protein	complement(join(560501..560763,560824..560982,561064..561226,561297..561418,561500..561599,561668..561793))	Acanthamoeba castellanii str. Neff	14915750
ACA1_217300	CDS	ACA1_217300	NW_004457380.1	562178	564605	R	encoded by transcript ACA1_217300A; GTPbinding protein YchF, putative	complement(join(562178..562309,562468..562537,562611..562780,562938..563004,563113..563168,563235..563265,563493..563893,563988..564116,564207..564259,564341..564605))	Acanthamoeba castellanii str. Neff	14915751
ACA1_217310	CDS	ACA1_217310	NW_004457380.1	564824	565225	R	encoded by transcript ACA1_217310A; transmembrane proteins 14c protein	complement(join(564824..564966,565051..565225))	Acanthamoeba castellanii str. Neff	14915752
ACA1_217320	CDS	ACA1_217320	NW_004457380.1	565332	566222	R	encoded by transcript ACA1_217320A; uncharacterized protein	complement(565332..566222)	Acanthamoeba castellanii str. Neff	14915671
ACA1_217330	CDS	ACA1_217330	NW_004457380.1	566242	572545	R	encoded by transcript ACA1_217330A; peptidase family m1 domain containing protein	complement(join(566242..566669,566752..567168,567272..567452,567481..567565,567667..567703,567952..568132,568288..568406,568493..568588,568669..568770,568856..568951,569017..569078,569170..569414,569580..569598,569696..569811,569896..570033,570124..570214,570290..570391,570557..570693,570767..570818,570890..571010,571117..571225,571332..571409,571508..571706,571799..571904,571984..572129,572208..572334,572455..572545))	Acanthamoeba castellanii str. Neff	14915672
ACA1_217340	CDS	ACA1_217340	NW_004457380.1	572882	574265	D	encoded by transcript ACA1_217340A; phosphoadenosine phosphosulfate reductase family protein	join(572882..573018,573108..573190,573279..573374,573390..573480,573600..573724,573819..573902,573972..574028,574129..574265)	Acanthamoeba castellanii str. Neff	14915673
ACA1_217350	CDS	ACA1_217350	NW_004457380.1	574417	575933	D	encoded by transcript ACA1_217350A; uncharacterized protein	join(574417..575298,575443..575755,575842..575933)	Acanthamoeba castellanii str. Neff	14915674
ACA1_217360	CDS	ACA1_217360	NW_004457380.1	576138	576917	R	encoded by transcript ACA1_217360A; bacterioferritin comigratory protein	complement(join(576138..576296,576458..576528,576622..576690,576779..576917))	Acanthamoeba castellanii str. Neff	14915675
ACA1_217370	CDS	ACA1_217370	NW_004457380.1	577091	581310	D	encoded by transcript ACA1_217370A; adaptorrelated protein complex 1, beta 1 subunit, isoform 2, putative	join(577091..577198,577270..577440,577574..577687,577878..578009,578041..578219,578321..578456,578558..578636,578734..578834,578978..579380,579444..579586,579695..579796,579920..580075,580174..580243,580349..580464,580533..580696,580782..581174,581304..581310)	Acanthamoeba castellanii str. Neff	14915676
ACA1_217480	CDS	ACA1_217480	NW_004457380.1	581800	582121	R	encoded by transcript ACA1_217480A; Notch, putative	complement(join(<581800..581876,581973..582059,582104..582121))	Acanthamoeba castellanii str. Neff	14915677
ACA1_217590	CDS	ACA1_217590	NW_004457380.1	587747	588460	D	encoded by transcript ACA1_217590A; uncharacterized protein	join(587747..587781,587886..588255,588368..>588460)	Acanthamoeba castellanii str. Neff	14915678
ACA1_217700	CDS	ACA1_217700	NW_004457380.1	589099	592534	D	encoded by transcript ACA1_217700A; tetratricopeptide repeat domain containing protein	join(589099..589254,589276..589431,589584..590170,590243..590387,590517..590714,590889..590967,591072..591209,591310..591471,591545..591738,591809..592070,592167..592237,592337..592534)	Acanthamoeba castellanii str. Neff	14915679
ACA1_217710	CDS	ACA1_217710	NW_004457380.1	592625	594072	R	encoded by transcript ACA1_217710A; Fbox domain containing protein	complement(join(592625..592750,592824..592975,593088..593306,593378..593465,593490..593590,593718..594072))	Acanthamoeba castellanii str. Neff	14915680
ACA1_217720	CDS	ACA1_217720	NW_004457380.1	594188	595361	R	encoded by transcript ACA1_217720A; Ubiquitinconjugating enzyme subfamily protein	complement(join(594188..594480,594559..594735,594823..594907,594986..595117,595257..595361))	Acanthamoeba castellanii str. Neff	14915681
ACA1_217730	CDS	ACA1_217730	NW_004457380.1	595577	595828	D	encoded by transcript ACA1_217730A; Tim10/DDP family zinc finger superfamily protein	595577..595828	Acanthamoeba castellanii str. Neff	14915682
ACA1_217740	CDS	ACA1_217740	NW_004457380.1	596177	599799	D	encoded by transcript ACA1_217740A; gammaglutamyltransferase	join(596177..596408,596505..596572,596690..596799,596934..597032,597137..597218,597288..597371,597526..597612,597773..597931,598063..598186,598296..598411,598497..598571,598687..598782,598869..598931,599041..599110,599213..599328,599413..599562,599689..599799)	Acanthamoeba castellanii str. Neff	14915683
ACA1_217750	CDS	ACA1_217750	NW_004457380.1	600185	604571	D	encoded by transcript ACA1_217750A; phosphoenolpyruvate carboxykinase (GTP), putative	join(600185..600284,600365..600573,600671..600860,600951..601322,601402..601756,601837..602708,602778..603080,603159..603644,603719..604046,604130..604571)	Acanthamoeba castellanii str. Neff	14915684
ACA1_217760	CDS	ACA1_217760	NW_004457380.1	604912	608184	D	encoded by transcript ACA1_217760A; uncharacterized protein	join(604912..605382,605586..605754,605878..606159,606266..606367,606499..606592,606709..606844,606978..607073,607176..607303,607410..607733,607827..608184)	Acanthamoeba castellanii str. Neff	14915782
ACA1_217770	CDS	ACA1_217770	NW_004457380.1	608294	612815	R	encoded by transcript ACA1_217770A; LIM domain containing protein	complement(join(608294..608397,608497..608603,608700..608842,608972..609075,609190..609312,609364..609503,609638..609716,609874..610078,610184..610320,610465..610633,610710..610806,611042..611157,611237..611953,612074..612199,612256..612316,612394..612492,612625..612815))	Acanthamoeba castellanii str. Neff	14915783
ACA1_217780	CDS	ACA1_217780	NW_004457380.1	613994	622151	D	encoded by transcript ACA1_217780A; Serineaspartate repeat-containing protein I, putative	join(613994..614086,614216..614833,615106..617697,617791..618106,618230..619068,619990..621400,621658..622151)	Acanthamoeba castellanii str. Neff	14915784
ACA1_218090	CDS	ACA1_218090	NW_004457380.1	622584	625094	R	encoded by transcript ACA1_218090A; Alpha/beta hydrolase fold protein	complement(join(622584..622886,622991..623271,623399..623504,623627..623723,623864..624096,624185..624286,624433..624619,624832..625094))	Acanthamoeba castellanii str. Neff	14915785
ACA1_218100	CDS	ACA1_218100	NW_004457380.1	625686	627452	R	encoded by transcript ACA1_218100A; Dehydrogenase/reductase (SDR family) member 1, putative	complement(join(625686..625861,625962..626087,626249..626303,626418..626558,626640..626822,626932..626993,627061..627120,627236..627452))	Acanthamoeba castellanii str. Neff	14915786
ACA1_218110	CDS	ACA1_218110	NW_004457380.1	628038	628883	D	encoded by transcript ACA1_218110A; fatty acid hydroxylase superfamily protein	628038..628883	Acanthamoeba castellanii str. Neff	14915787
ACA1_218120	CDS	ACA1_218120	NW_004457380.1	629062	630457	D	encoded by transcript ACA1_218120A; enoylCoA hydratase	join(629062..629267,629382..629731,629806..629947,630069..630201,630344..630457)	Acanthamoeba castellanii str. Neff	14915788
ACA1_218130	CDS	ACA1_218130	NW_004457380.1	630533	632088	R	encoded by transcript ACA1_218130A; glutathione Stransferase, C-terminal domain containing protein	complement(join(630533..630718,630797..630910,631022..631121,631227..631331,631484..631540,631620..631769,631892..632088))	Acanthamoeba castellanii str. Neff	14915789
ACA1_218140	CDS	ACA1_218140	NW_004457380.1	632462	634922	R	encoded by transcript ACA1_218140A; uncharacterized protein	complement(join(632462..633249,633344..634922))	Acanthamoeba castellanii str. Neff	14915790
ACA1_218260	CDS	ACA1_218260	NW_004457380.1	642540	642776	D	encoded by transcript ACA1_218260A; uncharacterized protein	642540..642776	Acanthamoeba castellanii str. Neff	14915792
ACA1_218370	CDS	ACA1_218370	NW_004457380.1	643155	648744	D	encoded by transcript ACA1_218370A; myosinI binding protein, putative	join(643155..643340,643463..643522,643682..643856,643998..644158,644267..644375,644495..644538,644687..644771,644905..645067,645151..645263,645390..645608,645730..645843,645955..646053,646160..646318,646465..646548,646646..646866,646958..647233,647346..647443,647551..647714,647798..648116,648222..648497,648612..648744)	Acanthamoeba castellanii str. Neff	14915793
ACA1_218380	CDS	ACA1_218380	NW_004457380.1	649052	649282	R	encoded by transcript ACA1_218380A; polyubiquitin, putative	complement(649052..649282)	Acanthamoeba castellanii str. Neff	14915794
ACA1_218390	CDS	ACA1_218390	NW_004457380.1	649396	652656	R	encoded by transcript ACA1_218390A; glycosyl hydrolase family 20, catalytic domain containing protein	complement(join(649396..649638,649733..649877,649961..650115,650293..650544,650622..650712,650827..650915,651004..651074,651216..651369,651509..651633,651714..651851,651987..652366,652547..652656))	Acanthamoeba castellanii str. Neff	14915795
ACA1_218400	CDS	ACA1_218400	NW_004457380.1	653116	653779	D	encoded by transcript ACA1_218400A; thioredoxin domain containing protein	join(653116..653141,653180..653260,653329..653395,653476..653585,653704..653779)	Acanthamoeba castellanii str. Neff	14915796
ACA1_218410	CDS	ACA1_218410	NW_004457380.1	654540	654894	R	encoded by transcript ACA1_218410A; uncharacterized protein	complement(join(654540..654646,654753..654894))	Acanthamoeba castellanii str. Neff	14915797
ACA1_218420	CDS	ACA1_218420	NW_004457380.1	657557	657793	D	encoded by transcript ACA1_218420A; uncharacterized protein	657557..657793	Acanthamoeba castellanii str. Neff	14915798
ACA1_218430	CDS	ACA1_218430	NW_004457380.1	658207	659068	R	encoded by transcript ACA1_218430A; Oligoribonuclease, mitochondrial precursor, putative	complement(join(658207..658383,658462..658668,658736..658828,658925..659068))	Acanthamoeba castellanii str. Neff	14915799
ACA1_218440	CDS	ACA1_218440	NW_004457380.1	659206	659884	D	encoded by transcript ACA1_218440A; RNA polymerase Rpb3/Rpb11 dimerization domain containing protein	join(659206..659258,659351..659440,659537..659643,659766..659884)	Acanthamoeba castellanii str. Neff	14915800
ACA1_218450	CDS	ACA1_218450	NW_004457380.1	660023	662071	R	encoded by transcript ACA1_218450A; uncharacterized protein	complement(join(660023..660249,660374..660536,660614..660719,660823..660920,661015..661131,661276..661341,661470..661531,661654..661746,661913..661962,662034..662071))	Acanthamoeba castellanii str. Neff	14915801
ACA1_218460	CDS	ACA1_218460	NW_004457380.1	662350	662613	D	encoded by transcript ACA1_218460A; uncharacterized protein	662350..662613	Acanthamoeba castellanii str. Neff	14915802
ACA1_218470	CDS	ACA1_218470	NW_004457380.1	663040	664383	R	encoded by transcript ACA1_218470A; rasrelated protein Rab-21, putative	complement(join(663040..663155,663260..663338,664090..664226,664344..664383))	Acanthamoeba castellanii str. Neff	14915803
ACA1_218580	CDS	ACA1_218580	NW_004457380.1	664657	669663	R	encoded by transcript ACA1_218580A; leucine rich repeat domain containing protein	complement(join(664657..664907,664987..665139,665287..665356,665445..665588,665708..666618,666741..666836,666918..667097,667257..667432,667550..667680,667815..667917,668031..668210,668338..668461,668537..669204,669386..669663))	Acanthamoeba castellanii str. Neff	14915804
ACA1_218590	CDS	ACA1_218590	NW_004457380.1	669885	672239	R	encoded by transcript ACA1_218590A; uncharacterized protein	complement(join(669885..669902,670025..670248,670428..670521,670630..670779,670936..671046,671199..671291,671456..671518,671609..671694,671804..671914,672002..672239))	Acanthamoeba castellanii str. Neff	14915805
ACA1_218600	CDS	ACA1_218600	NW_004457380.1	672454	676116	R	encoded by transcript ACA1_218600A; PCI domain containing protein	complement(join(672454..673131,673143..674703,674822..675246,675352..675636,675704..675790,675859..675968,676074..676116))	Acanthamoeba castellanii str. Neff	14915806
ACA1_218610	CDS	ACA1_218610	NW_004457380.1	676351	677944	R	encoded by transcript ACA1_218610A; uncharacterized protein	complement(join(676351..676473,676595..676900,677021..677128,677237..677381,677475..677670,677752..677944))	Acanthamoeba castellanii str. Neff	14915807
ACA1_218620	CDS	ACA1_218620	NW_004457380.1	678478	681199	R	encoded by transcript ACA1_218620A; cholinesterase	complement(join(678478..678676,678778..678862,678960..679040,679132..679392,679455..679559,679591..679705,679787..679849,679933..680067,680156..680272,680386..680472,680585..680745,680884..680977,681053..681199))	Acanthamoeba castellanii str. Neff	14915808
ACA1_218630	CDS	ACA1_218630	NW_004457380.1	682166	682654	D	encoded by transcript ACA1_218630A; uncharacterized protein	join(682166..682276,682338..682398,682469..682505,682585..682654)	Acanthamoeba castellanii str. Neff	14915809
ACA1_218640	CDS	ACA1_218640	NW_004457380.1	682869	684116	R	encoded by transcript ACA1_218640A; nucleoside diphosphate kinase 1, putative	complement(join(682869..682935,683010..683290,683376..683542,683625..683664,683733..683800,683960..684025,684095..684116))	Acanthamoeba castellanii str. Neff	14915723
ACA1_218650	CDS	ACA1_218650	NW_004457380.1	684385	685422	R	encoded by transcript ACA1_218650A; ribosomal protein L9, Nterminal domain containing protein	complement(join(684385..684567,684690..684803,684882..685137,685418..685422))	Acanthamoeba castellanii str. Neff	14915724
ACA1_218670	CDS	ACA1_218670	NW_004457380.1	686349	687908	R	encoded by transcript ACA1_218670A; urease accessory protein UreD, putative	complement(join(686349..686519,686620..686736,686822..686893,686976..687635,687846..687908))	Acanthamoeba castellanii str. Neff	14915726
ACA1_218680	CDS	ACA1_218680	NW_004457380.1	688516	690476	R	encoded by transcript ACA1_218680A; PH domain containing protein	complement(join(688516..688940,689017..689286,689503..689758,689890..689970,690072..690152,690251..690307,690417..690476))	Acanthamoeba castellanii str. Neff	14915727
ACA1_218690	CDS	ACA1_218690	NW_004457380.1	690672	691480	D	encoded by transcript ACA1_218690A; 1,2dihydroxy-3-keto-5-methylthiopentene dioxygenase	join(690672..690824,690943..691064,691177..691297,691373..691480)	Acanthamoeba castellanii str. Neff	14915728
ACA1_218700	CDS	ACA1_218700	NW_004457380.1	692450	696385	D	encoded by transcript ACA1_218700A; uncharacterized protein	join(692450..693223,693552..694073,694121..694201,694324..694827,694929..695191,695268..695667,696263..696385)	Acanthamoeba castellanii str. Neff	14915729
ACA1_218910	CDS	ACA1_218910	NW_004457380.1	696521	698188	D	encoded by transcript ACA1_218910A; uncharacterized protein	join(696521..696558,696666..696949,697083..697200,697342..697466,697480..697873,698002..698188)	Acanthamoeba castellanii str. Neff	14915730
ACA1_219020	CDS	ACA1_219020	NW_004457380.1	698547	699831	D	encoded by transcript ACA1_219020A; uncharacterized protein	join(698547..698704,698792..698988,699080..699831)	Acanthamoeba castellanii str. Neff	14915731
ACA1_219030	CDS	ACA1_219030	NW_004457380.1	699981	701098	D	encoded by transcript ACA1_219030A; uncharacterized protein	join(699981..700103,700226..700343,700411..700486,700622..700707,700825..701009,701057..701098)	Acanthamoeba castellanii str. Neff	14915732
ACA1_219040	CDS	ACA1_219040	NW_004457380.1	701829	704911	D	encoded by transcript ACA1_219040A; Ubox domain containing protein	join(701829..701986,702133..702250,702350..702477,702612..702724,702796..702860,702955..703140,703298..703603,703689..703750,703764..703927,704014..704415,704495..704712,704813..704911)	Acanthamoeba castellanii str. Neff	14915733
ACA1_219050	CDS	ACA1_219050	NW_004457380.1	705288	706028	R	encoded by transcript ACA1_219050A; uncharacterized protein	complement(join(705288..705438,705532..705668,705738..706028))	Acanthamoeba castellanii str. Neff	14915734
ACA1_219060	CDS	ACA1_219060	NW_004457380.1	706355	709799	R	encoded by transcript ACA1_219060A; DWNN domain containing protein	complement(join(706355..707992,708071..708330,708475..708565,708578..708699,708866..709206,709228..709549,709622..709799))	Acanthamoeba castellanii str. Neff	14915735
ACA1_219070	CDS	ACA1_219070	NW_004457380.1	710158	712700	D	encoded by transcript ACA1_219070A; Nfrl, putative	join(710158..710222,710302..710416,710517..710751,710832..711031,711110..711201,711312..711442,711525..711640,711725..711793,711903..712040,712120..712231,712303..712512,712594..712700)	Acanthamoeba castellanii str. Neff	14915736
ACA1_219080	CDS	ACA1_219080	NW_004457380.1	712798	717099	D	encoded by transcript ACA1_219080A; uncharacterized protein	join(712798..712891,713002..713123,713208..713282,713440..713532,713617..713705,713818..713973,714096..714186,714274..714368,714532..714678,714787..714886,715051..715129,715264..715412,715514..715633,715734..715868,715954..716076,716159..716242,716362..717099)	Acanthamoeba castellanii str. Neff	14915737
ACA1_219090	CDS	ACA1_219090	NW_004457380.1	717181	717527	D	encoded by transcript ACA1_219090A; uncharacterized protein	join(717181..717222,717273..717527)	Acanthamoeba castellanii str. Neff	14915834
ACA1_219100	CDS	ACA1_219100	NW_004457380.1	717677	728796	R	encoded by transcript ACA1_219100A; rapamycin binding domain containing protein	complement(join(717677..717839,717935..718085,718162..718450,718571..718810,718918..719014,719146..719335,719466..719659,719757..719953,720059..720260,720359..720513,720693..720801,720905..721294,721372..721550,721654..721728,721818..722003,722116..722438,722535..722724,722814..722941,723060..723281,723380..723519,723630..723757,723904..724115,724260..724374,724464..724649,724860..725182,725266..725455,725543..725670,725788..725815,726599..726810,726896..727175,727294..727451,727570..727760,727849..728038,728135..728254,728322..728454,728584..728629,728693..728796))	Acanthamoeba castellanii str. Neff	14915835
ACA1_219410	CDS	ACA1_219410	NW_004457380.1	729021	730199	R	encoded by transcript ACA1_219410A; exonuclease protein, putative	complement(join(729021..729356,729484..729612,729734..729822,729917..729984,730099..730199))	Acanthamoeba castellanii str. Neff	14915836
ACA1_219420	CDS	ACA1_219420	NW_004457380.1	731197	732643	D	encoded by transcript ACA1_219420A; Fbox domain containing protein	join(731197..731419,731498..731582,731665..731725,731873..731953,732168..732284,732385..732441,732533..732643)	Acanthamoeba castellanii str. Neff	14915837
ACA1_219430	CDS	ACA1_219430	NW_004457380.1	732845	733359	D	encoded by transcript ACA1_219430A; iron donor protein CyaY, putative	join(732845..733000,733059..733153,733236..733359)	Acanthamoeba castellanii str. Neff	14915838
ACA1_219440	CDS	ACA1_219440	NW_004457380.1	733461	738235	R	encoded by transcript ACA1_219440A; helicase associated domain containing protein	complement(join(733461..733934,734033..734913,735018..735124,735239..735804,735905..735995,736078..737108,737191..737284,737409..738235))	Acanthamoeba castellanii str. Neff	14915839
ACA1_219450	CDS	ACA1_219450	NW_004457380.1	739085	739774	R	encoded by transcript ACA1_219450A; uncharacterized protein	complement(join(739085..739108,739217..739309,739416..739723,739762..739774))	Acanthamoeba castellanii str. Neff	14915840
ACA1_219460	CDS	ACA1_219460	NW_004457380.1	741287	743574	D	encoded by transcript ACA1_219460A; MT-A70 protein	join(741287..741358,741451..741621,741742..741899,741993..742060,742155..742287,742395..742533,742622..742699,742808..742966,743025..743063,743172..743257,743514..743574)	Acanthamoeba castellanii str. Neff	14915841
ACA1_219470	CDS	ACA1_219470	NW_004457380.1	743934	744721	D	encoded by transcript ACA1_219470A; uncharacterized protein	join(743934..744662,744683..744721)	Acanthamoeba castellanii str. Neff	14915842
ACA1_219480	CDS	ACA1_219480	NW_004457380.1	745077	749905	D	encoded by transcript ACA1_219480A; uncharacterized protein	join(745077..745535,745617..745644,745809..745926,746023..746092,746199..746361,746493..746646,746740..746913,747009..747123,747224..747448,747559..747663,747774..747920,748023..748163,748249..748332,748411..748587,748701..748784,748897..749128,749245..749376,749459..749586,749678..749905)	Acanthamoeba castellanii str. Neff	14915843
ACA1_219490	CDS	ACA1_219490	NW_004457380.1	750104	751358	D	encoded by transcript ACA1_219490A; 2OGFe(II) oxygenase family oxidoreductase	join(750104..750615,750733..750845,750940..751078,751268..751358)	Acanthamoeba castellanii str. Neff	14915844
ACA1_219500	CDS	ACA1_219500	NW_004457380.1	751879	753595	R	encoded by transcript ACA1_219500A; alternative oxidase isoform B, putative	complement(join(751879..752007,752102..752243,752353..752492,752587..752767,752938..753075,753213..753595))	Acanthamoeba castellanii str. Neff	14915845
ACA1_219510	CDS	ACA1_219510	NW_004457380.1	753904	755602	R	encoded by transcript ACA1_219510A; phytanoylCoA dioxygenase family protein	complement(join(753904..753951,754020..754108,754192..754267,754326..754477,754561..754642,754710..754829,755591..755602))	Acanthamoeba castellanii str. Neff	14915584
ACA1_219630	CDS	ACA1_219630	NW_004457380.1	761734	762090	R	encoded by transcript ACA1_219630A; uncharacterized protein	complement(761734..762090)	Acanthamoeba castellanii str. Neff	14915586
ACA1_219640	CDS	ACA1_219640	NW_004457380.1	762353	763660	R	encoded by transcript ACA1_219640A; uncharacterized protein	complement(join(762353..763229,763377..763660))	Acanthamoeba castellanii str. Neff	14915587
ACA1_219650	CDS	ACA1_219650	NW_004457380.1	763996	764679	D	encoded by transcript ACA1_219650A; Erg28 protein	join(763996..764122,764223..764287,764390..764531,764645..764679)	Acanthamoeba castellanii str. Neff	14915588
ACA1_219660	CDS	ACA1_219660	NW_004457380.1	765338	765796	R	encoded by transcript ACA1_219660A; uncharacterized protein	complement(join(765338..765354,765466..765796))	Acanthamoeba castellanii str. Neff	14915589
ACA1_219670	CDS	ACA1_219670	NW_004457380.1	766904	769626	R	encoded by transcript ACA1_219670A; uncharacterized protein	complement(join(766904..767043,767159..767246,767383..767429,767535..768145,768256..768539,768690..769121,769212..769259,769381..769626))	Acanthamoeba castellanii str. Neff	14915590
ACA1_219680	CDS	ACA1_219680	NW_004457380.1	769982	774763	R	encoded by transcript ACA1_219680A; HEAT repeat domain containing protein	complement(join(769982..770631,770754..770922,771017..771121,771210..771277,771387..771518,771685..771733,771828..772067,772214..772346,772436..772592,772715..773060,773207..773296,773457..773567,773664..773734,773824..773904,773992..774763))	Acanthamoeba castellanii str. Neff	14915591
ACA1_219690	CDS	ACA1_219690	NW_004457380.1	775554	776959	D	encoded by transcript ACA1_219690A; uncharacterized protein	join(775554..775678,775852..776303,776411..776469,776556..776690,776801..776959)	Acanthamoeba castellanii str. Neff	14915592
ACA1_219700	CDS	ACA1_219700	NW_004457380.1	777173	783317	R	encoded by transcript ACA1_219700A; protein kinase domain containing protein	complement(join(777173..777639,777721..777840,777965..778156,778258..778626,778722..778809,778823..778842,778987..779073,779336..779474,779597..779740,779870..779923,780089..780277,780549..780669,780822..780930,781071..781232,781348..781488,781606..781686,781779..781946,782118..782201,782296..782447,782503..782648,782812..782945,783164..783317))	Acanthamoeba castellanii str. Neff	14915593
ACA1_219710	CDS	ACA1_219710	NW_004457380.1	783656	784249	R	encoded by transcript ACA1_219710A; uncharacterized protein	complement(783656..784249)	Acanthamoeba castellanii str. Neff	14915594
ACA1_219720	CDS	ACA1_219720	NW_004457380.1	784734	788923	D	encoded by transcript ACA1_219720A; bromodomain domain containing protein	join(<784734..784818,784931..785062,785525..785645,785750..785858,785950..786122,786226..786282,786445..786508,786711..786804,786898..787162,787297..787470,787553..787679,787821..787931,788039..788182,788286..788592,788688..788923)	Acanthamoeba castellanii str. Neff	14915595
ACA1_219730	CDS	ACA1_219730	NW_004457380.1	789179	796848	R	encoded by transcript ACA1_219730A; Diaphanous FH3 Domaincontaining protein	complement(join(789179..789249,789389..789527,789634..789720,789852..789938,790063..790125,790142..790167,790342..790352,790432..790456,790576..790728,790824..790896,791033..791188,791300..791392,791513..791569,791666..791736,791818..791883,791975..792155,792237..792341,792439..793505,793651..793850,793970..794094,794208..794504,794525..794620,794819..794888,794991..795065,795140..795251,795355..795556,795656..795775,795969..796056,796139..796848))	Acanthamoeba castellanii str. Neff	14915596
ACA1_219740	CDS	ACA1_219740	NW_004457380.1	797437	798305	D	encoded by transcript ACA1_219740A; Nacetyltransferase	join(797437..797512,797596..797789,797877..797938,798021..798131,798257..798305)	Acanthamoeba castellanii str. Neff	14915597
ACA1_219750	CDS	ACA1_219750	NW_004457380.1	798550	801417	D	encoded by transcript ACA1_219750A; geranylgeranyl reductase subfamily protein	join(798550..798972,799053..799141,799266..799398,799520..799681,799777..799849,799937..800004,800156..800410,800538..800634,800782..800923,801043..801148,801358..801417)	Acanthamoeba castellanii str. Neff	14915896
ACA1_219760	CDS	ACA1_219760	NW_004457380.1	802047	807563	D	encoded by transcript ACA1_219760A; uncharacterized protein	join(802047..802448,802529..802756,802788..802897,802994..803171,803298..803370,803487..803635,803745..803886,803954..804103,804187..804365,804480..804661,804760..804913,805032..805422,805518..805716,805828..806023,806113..806337,806477..806568,806731..806824,806915..807041,807129..807294,807416..807563)	Acanthamoeba castellanii str. Neff	14915897
ACA1_219770	CDS	ACA1_219770	NW_004457380.1	807811	810131	D	encoded by transcript ACA1_219770A; Fbox domain containing protein	join(807811..808177,808285..808485,808577..808906,809008..809072,809105..809416,809519..809658,809758..809856,809960..810131)	Acanthamoeba castellanii str. Neff	14915898
ACA1_219780	CDS	ACA1_219780	NW_004457380.1	810588	810932	D	encoded by transcript ACA1_219780A; uncharacterized protein	810588..810932	Acanthamoeba castellanii str. Neff	14915899
ACA1_219790	CDS	ACA1_219790	NW_004457380.1	811144	815197	R	encoded by transcript ACA1_219790A; ARID/BRIGHT DNA binding domain containing protein	complement(join(811144..811194,811293..811451,811535..811675,811775..811883,811991..812157,812233..812455,812561..812712,812799..812924,813009..813709,813778..813938,814065..814609,814736..815197))	Acanthamoeba castellanii str. Neff	14915900
ACA1_219800	CDS	ACA1_219800	NW_004457380.1	815984	817451	D	encoded by transcript ACA1_219800A; uncharacterized protein	join(815984..816302,816396..816630,816732..816871,816935..817172,817238..817451)	Acanthamoeba castellanii str. Neff	14915901
ACA1_219810	CDS	ACA1_219810	NW_004457380.1	817967	818842	R	encoded by transcript ACA1_219810A; uncharacterized protein	complement(join(817967..818603,818688..818842))	Acanthamoeba castellanii str. Neff	14915902
ACA1_219820	CDS	ACA1_219820	NW_004457380.1	819109	820323	R	encoded by transcript ACA1_219820A; actin-1, putative	complement(join(819109..819868,819956..820323))	Acanthamoeba castellanii str. Neff	14915903
ACA1_219830	CDS	ACA1_219830	NW_004457380.1	820821	822658	R	encoded by transcript ACA1_219830A; 2OGFe(II) oxygenase	complement(join(820821..820978,821097..821186,821322..821459,821639..821792,821874..821948,822043..822151,822270..822385,822500..822658))	Acanthamoeba castellanii str. Neff	14915904
ACA1_219840	CDS	ACA1_219840	NW_004457380.1	822778	823049	D	encoded by transcript ACA1_219840A; uncharacterized protein	join(822778..822787,822844..823049)	Acanthamoeba castellanii str. Neff	14915905
ACA1_219850	CDS	ACA1_219850	NW_004457380.1	823141	826178	R	encoded by transcript ACA1_219850A; radical SAM domain containing protein	complement(join(823141..823300,823407..823570,823674..824055,824168..824220,824362..824456,824553..824635,824744..824887,824999..825217,825330..825469,825553..825997,826081..826178))	Acanthamoeba castellanii str. Neff	14915906
ACA1_219860	CDS	ACA1_219860	NW_004457380.1	826255	828285	D	encoded by transcript ACA1_219860A; uncharacterized protein	join(826255..826395,826540..827125,827210..827268,827361..827574,827648..828285)	Acanthamoeba castellanii str. Neff	14915907
ACA1_219870	CDS	ACA1_219870	NW_004457380.1	828443	830643	R	encoded by transcript ACA1_219870A; lysophospholipase 3 (lysosomal phospholipase A2) isoform 7, putative	complement(join(828443..828738,828825..828960,829076..829143,829276..829434,829517..829762,829898..830046,830155..830276,830410..830643))	Acanthamoeba castellanii str. Neff	14915908
ACA1_219880	CDS	ACA1_219880	NW_004457380.1	830797	833687	R	encoded by transcript ACA1_219880A; leishmanolysin, putative	complement(join(830797..830963,831134..831153,831185..831249,831341..831448,831555..831703,831823..831868,831964..832038,832117..832217,832358..832480,832565..832645,832746..832848,832931..833002,833097..833192,833296..833399,833434..833504,833566..833687))	Acanthamoeba castellanii str. Neff	14915909
ACA1_219890	CDS	ACA1_219890	NW_004457380.1	833965	834557	D	encoded by transcript ACA1_219890A; uncharacterized protein	join(833965..834159,834186..834557)	Acanthamoeba castellanii str. Neff	14915864
ACA1_219900	CDS	ACA1_219900	NW_004457380.1	834906	837722	R	encoded by transcript ACA1_219900A; DENN (AEX3) domain containing protein	complement(join(834906..835080,835182..835355,835472..835708,835806..835976,836083..836857,836958..837099,837218..837428,837562..837722))	Acanthamoeba castellanii str. Neff	14915865
ACA1_219920	CDS	ACA1_219920	NW_004457380.1	843680	844795	D	encoded by transcript ACA1_219920A; uncharacterized protein	join(843680..844108,844276..844710,844760..844795)	Acanthamoeba castellanii str. Neff	14915867
ACA1_220030	CDS	ACA1_220030	NW_004457380.1	846162	846886	R	encoded by transcript ACA1_220030A; mitochondrial NADH:ubiquinone oxidoreductase 19 kDa subunit	complement(join(846162..846210,846371..846498,846596..846886))	Acanthamoeba castellanii str. Neff	14915868
ACA1_220040	CDS	ACA1_220040	NW_004457380.1	847077	848154	R	encoded by transcript ACA1_220040A; 40S ribosomal protein S3a, putative	complement(join(847077..847290,847359..847758,847828..847931,848009..848059,848144..848154))	Acanthamoeba castellanii str. Neff	14915869
ACA1_220050	CDS	ACA1_220050	NW_004457380.1	849344	851199	D	encoded by transcript ACA1_220050A; calponin domain containing protein	join(849344..849404,849543..849740,849890..850063,850260..850791,850887..851199)	Acanthamoeba castellanii str. Neff	14915870
ACA1_220060	CDS	ACA1_220060	NW_004457380.1	851953	853760	D	encoded by transcript ACA1_220060A; SAP domain containing protein	join(851953..852190,852334..852998,853073..853226,853327..853760)	Acanthamoeba castellanii str. Neff	14915871
ACA1_220070	CDS	ACA1_220070	NW_004457380.1	854187	855777	D	encoded by transcript ACA1_220070A; ergosterol biosynthesis erg4/erg24 family protein	join(854187..854201,854369..854485,854543..854651,854739..855121,855223..855777)	Acanthamoeba castellanii str. Neff	14915872
ACA1_220090	CDS	ACA1_220090	NW_004457380.1	860475	862914	R	encoded by transcript ACA1_220090A; Nethylammeline chlorohydrolase	complement(join(860475..860631,860770..860897,860985..861088,861227..861367,861454..861639,861773..861892,862002..862087,862197..862285,862359..862600,862803..862914))	Acanthamoeba castellanii str. Neff	14915874
ACA1_220100	CDS	ACA1_220100	NW_004457380.1	863167	863608	R	encoded by transcript ACA1_220100A; CRIPT, putative	complement(join(863167..863447,863593..863608))	Acanthamoeba castellanii str. Neff	14915875
ACA1_220110	CDS	ACA1_220110	NW_004457380.1	864703	866252	R	encoded by transcript ACA1_220110A; uncharacterized protein	complement(join(864703..864747,864825..864908,865008..865091,865176..865334,865506..865580,865740..865857,865954..866048,866160..866252))	Acanthamoeba castellanii str. Neff	14915876
ACA1_220120	CDS	ACA1_220120	NW_004457380.1	866958	867963	D	encoded by transcript ACA1_220120A; uricase	join(866958..867294,867416..867963)	Acanthamoeba castellanii str. Neff	14915877
ACA1_220130	CDS	ACA1_220130	NW_004457380.1	868142	869049	D	encoded by transcript ACA1_220130A; uncharacterized protein	join(868142..868202,868293..868393,868611..868782,868898..869049)	Acanthamoeba castellanii str. Neff	14915878
ACA1_220140	CDS	ACA1_220140	NW_004457380.1	869465	871984	D	encoded by transcript ACA1_220140A; eukaryotic translation elongation factor 2, putative	869465..871984	Acanthamoeba castellanii str. Neff	14915879
ACA1_220160	CDS	ACA1_220160	NW_004457380.1	875832	880460	R	encoded by transcript ACA1_220160A; Hypothetical protein	complement(join(875832..876002,876065..876187,876298..876384,876498..876584,876658..876748,876918..877034,877156..877240,877395..877482,877564..877657,877839..877922,878027..878165,878345..878402,878508..878665,878772..878892,878992..879159,879239..879297,879411..879527,879625..879685,879807..879904,880031..880460))	Acanthamoeba castellanii str. Neff	14915925
ACA1_220170	CDS	ACA1_220170	NW_004457380.1	881026	884007	D	encoded by transcript ACA1_220170A; RSL1D1 protein	join(881026..881240,881452..881563,881648..881796,881905..881997,882105..882147,882166..884007)	Acanthamoeba castellanii str. Neff	14915926
ACA1_220180	CDS	ACA1_220180	NW_004457380.1	884128	890428	R	encoded by transcript ACA1_220180A; uncharacterized protein	complement(join(884128..885036,885146..885213,885306..885457,885582..885700,885771..885969,886112..886696,886807..886913,887088..887151,887241..887431,887536..887651,887794..887917,888042..888119,888133..888194,888317..888460,888583..888747,888971..889129,889213..889323,889414..889556,890034..890428))	Acanthamoeba castellanii str. Neff	14915927
ACA1_220190	CDS	ACA1_220190	NW_004457380.1	891323	894252	R	encoded by transcript ACA1_220190A; tubulin tyrosine ligaselike family, member 12, putative	complement(join(891323..891501,891593..891794,891892..891963,892055..892152,892221..892312,892400..892567,892669..892740,892824..893229,893313..893396,893495..893602,893670..893773,893856..894013,894136..894252))	Acanthamoeba castellanii str. Neff	14915928
ACA1_220200	CDS	ACA1_220200	NW_004457380.1	894468	898279	D	encoded by transcript ACA1_220200A; uncharacterized protein	join(894468..894571,894674..894913,894985..895165,895235..895454,895525..895601,895676..895813,895884..895970,896048..896119,896190..896363,896430..896501,896586..896955,897014..897183,897249..897342,897417..897500,897619..897695,897833..898188,898264..898279)	Acanthamoeba castellanii str. Neff	14915929
ACA1_220210	CDS	ACA1_220210	NW_004457380.1	898242	899474	R	encoded by transcript ACA1_220210A; uncharacterized protein	complement(join(898242..898275,898768..898946,899049..899474))	Acanthamoeba castellanii str. Neff	14915930
ACA1_220320	CDS	ACA1_220320	NW_004457380.1	899909	900557	D	encoded by transcript ACA1_220320A; U3 small nucleolar RNA-associated protein 15, putative	join(899909..900004,900148..900403,900544..900557)	Acanthamoeba castellanii str. Neff	14915931
ACA1_220430	CDS	ACA1_220430	NW_004457380.1	901135	901394	R	encoded by transcript ACA1_220430A; uncharacterized protein	complement(join(901135..901175,901193..901394))	Acanthamoeba castellanii str. Neff	14915932
ACA1_220440	CDS	ACA1_220440	NW_004457380.1	901943	902158	R	encoded by transcript ACA1_220440A; uncharacterized protein	complement(901943..902158)	Acanthamoeba castellanii str. Neff	14915933
ACA1_220450	CDS	ACA1_220450	NW_004457380.1	902378	902699	R	encoded by transcript ACA1_220450A; uncharacterized protein	complement(join(902378..902617,902694..902699))	Acanthamoeba castellanii str. Neff	14915934
ACA1_220460	CDS	ACA1_220460	NW_004457380.1	902803	903872	R	encoded by transcript ACA1_220460A; uncharacterized protein	complement(join(902803..902922,902989..903492,903548..903744,903803..903872))	Acanthamoeba castellanii str. Neff	14915935
ACA1_220470	CDS	ACA1_220470	NW_004457380.1	905876	906301	D	encoded by transcript ACA1_220470A; uncharacterized protein	join(905876..905893,906005..906301)	Acanthamoeba castellanii str. Neff	14915936
ACA1_220480	CDS	ACA1_220480	NW_004457380.1	906735	907008	R	encoded by transcript ACA1_220480A; uncharacterized protein	complement(join(906735..906781,906849..907008))	Acanthamoeba castellanii str. Neff	14915937
ACA1_220490	CDS	ACA1_220490	NW_004457380.1	907436	908438	D	encoded by transcript ACA1_220490A; uncharacterized protein	join(907436..907726,907792..907923,907983..908438)	Acanthamoeba castellanii str. Neff	14915938
ACA1_220500	CDS	ACA1_220500	NW_004457380.1	908561	909306	D	encoded by transcript ACA1_220500A; uncharacterized protein	join(<908561..908830,908872..909306)	Acanthamoeba castellanii str. Neff	14915939
ACA1_220510	CDS	ACA1_220510	NW_004457380.1	910130	912619	D	encoded by transcript ACA1_220510A; U3 small nucleolar RNA-associated protein 15 family protein	join(910130..910225,910344..910621,910739..910862,910974..911154,911219..911319,911470..911592,911673..911831,911927..912028,912155..912332,912438..912619)	Acanthamoeba castellanii str. Neff	14915941
ACA1_220530	CDS	ACA1_220530	NW_004457380.1	917190	917613	D	encoded by transcript ACA1_220530A; uncharacterized protein	join(917190..917409,917486..917613)	Acanthamoeba castellanii str. Neff	14915943
ACA1_220540	CDS	ACA1_220540	NW_004457380.1	918468	920483	D	encoded by transcript ACA1_220540A; Histone-lysine N-methyltransferase	join(918468..918845,918964..919439,919514..919575,919770..919840,919921..919986,920059..920145,920253..920483)	Acanthamoeba castellanii str. Neff	14915944
ACA1_220550	CDS	ACA1_220550	NW_004457380.1	920565	921560	D	encoded by transcript ACA1_220550A; SET domain containing protein	join(920565..921223,921294..921398,921488..921560)	Acanthamoeba castellanii str. Neff	14915945
ACA1_220570	CDS	ACA1_220570	NW_004457380.1	923389	924959	D	encoded by transcript ACA1_220570A; cyclopropyl isomeraselike protein	join(923389..923401,923526..923653,923785..923935,923952..923995,924038..924151,924224..924312,924450..924513,924608..924705,924797..924959)	Acanthamoeba castellanii str. Neff	14915947
ACA1_220580	CDS	ACA1_220580	NW_004457380.1	925278	926006	D	encoded by transcript ACA1_220580A; uncharacterized protein	925278..926006	Acanthamoeba castellanii str. Neff	14915948
ACA1_220590	CDS	ACA1_220590	NW_004457380.1	926233	927090	D	encoded by transcript ACA1_220590A; uncharacterized protein	join(926233..926356,926427..926543,926618..926736,926812..926893,926972..927090)	Acanthamoeba castellanii str. Neff	14915949
ACA1_220600	CDS	ACA1_220600	NW_004457380.1	927357	928194	D	encoded by transcript ACA1_220600A; leucine rich repeat domain containing protein	join(927357..927587,927691..927873,928006..928194)	Acanthamoeba castellanii str. Neff	14915950
ACA1_220610	CDS	ACA1_220610	NW_004457380.1	928297	931940	R	encoded by transcript ACA1_220610A; RasGEF domain containing protein	complement(join(928297..928434,928533..928656,928740..928954,929017..929146,929245..929294,929412..929576,929665..929820,929939..930023,930170..930251,930401..930550,930629..930796,930905..931057,931145..931212,931308..931396,931665..931940))	Acanthamoeba castellanii str. Neff	14915951
ACA1_220620	CDS	ACA1_220620	NW_004457380.1	932973	934508	R	encoded by transcript ACA1_220620A; uncharacterized protein	complement(join(932973..933437,933504..933594,933651..933795,933868..933985,934073..934199,934255..934508))	Acanthamoeba castellanii str. Neff	14915952
ACA1_220630	CDS	ACA1_220630	NW_004457380.1	934549	936102	R	encoded by transcript ACA1_220630A; tRNA pseudouridine synthase A, putative	complement(join(934549..934717,934800..934939,935066..935365,935463..935609,935711..935748,935839..935949,936033..936102))	Acanthamoeba castellanii str. Neff	14915953
ACA1_220640	CDS	ACA1_220640	NW_004457380.1	936167	936887	R	encoded by transcript ACA1_220640A; tRNA pseudouridylate synthase	complement(join(936167..936407,936510..936603,936680..936887))	Acanthamoeba castellanii str. Neff	14915954
ACA1_220650	CDS	ACA1_220650	NW_004457380.1	937426	939071	R	encoded by transcript ACA1_220650A; protein ras1, putative	complement(join(937426..937599,937689..937721,937824..937948,938065..938093,938226..938307,938431..938449,938560..938621,938799..938820,938997..939071))	Acanthamoeba castellanii str. Neff	14915955
ACA1_220660	CDS	ACA1_220660	NW_004457380.1	939552	941360	R	encoded by transcript ACA1_220660A; phosphoserine transaminase	complement(join(939552..939748,939850..940012,940103..940230,940327..940536,940637..940917,941028..941123,941251..941360))	Acanthamoeba castellanii str. Neff	14915956
ACA1_220670	CDS	ACA1_220670	NW_004457380.1	941428	943152	R	encoded by transcript ACA1_220670A; tetratricopeptide repeat-containing protein	complement(join(941428..942185,942291..942411,942525..942647,942688..942970,943106..943152))	Acanthamoeba castellanii str. Neff	14915881
ACA1_220680	CDS	ACA1_220680	NW_004457380.1	943247	945204	D	encoded by transcript ACA1_220680A; uncharacterized protein	join(943247..943902,944007..944166,944269..944353,944458..945039,945056..945204)	Acanthamoeba castellanii str. Neff	14915882
ACA1_220690	CDS	ACA1_220690	NW_004457380.1	945663	946681	R	encoded by transcript ACA1_220690A; zinc finger, C3HC4 type (RING finger) domain containing protein	complement(join(945663..945842,945946..946138,946260..946373,946476..946681))	Acanthamoeba castellanii str. Neff	14915883
ACA1_220700	CDS	ACA1_220700	NW_004457380.1	947312	949228	D	encoded by transcript ACA1_220700A; betaketoacyl-acyl-carrier-protein synthase II, putative	join(947312..947480,947550..947707,947764..947835,947910..947997,948076..948223,948295..948412,948483..948585,948655..948756,948848..948996,949064..949228)	Acanthamoeba castellanii str. Neff	14915884
ACA1_220710	CDS	ACA1_220710	NW_004457380.1	949630	950934	D	encoded by transcript ACA1_220710A; malate dehydrogenase 3, putative	join(949630..949744,949831..950006,950112..950349,950441..950625,950728..950934)	Acanthamoeba castellanii str. Neff	14915885
ACA1_220720	CDS	ACA1_220720	NW_004457380.1	953132	955161	D	encoded by transcript ACA1_220720A; homeobox domain containing protein	join(953132..953567,953612..955161)	Acanthamoeba castellanii str. Neff	14915886
ACA1_220730	CDS	ACA1_220730	NW_004457380.1	955354	957140	R	encoded by transcript ACA1_220730A; DEAD/DEAH box helicase domain containing protein	complement(join(955354..955583,955669..955965,956132..957058,957125..957140))	Acanthamoeba castellanii str. Neff	14915887
ACA1_220740	CDS	ACA1_220740	NW_004457380.1	959126	959908	D	encoded by transcript ACA1_220740A; tetratricopeptide repeat domain containing protein	join(959126..959233,959411..959726,959808..959908)	Acanthamoeba castellanii str. Neff	14915888
ACA1_220750	CDS	ACA1_220750	NW_004457380.1	960054	961416	R	encoded by transcript ACA1_220750A; urease accessory protein UreF, putative	complement(join(960054..960472,960580..960718,960835..960918,960987..961082,961229..961287,961347..961416))	Acanthamoeba castellanii str. Neff	14915889
ACA1_220760	CDS	ACA1_220760	NW_004457380.1	961897	962902	R	encoded by transcript ACA1_220760A; catalytic, putative	complement(join(961897..961970,962050..962215,962299..962387,962459..962569,962636..962771,962870..962902))	Acanthamoeba castellanii str. Neff	14915890
ACA1_220770	CDS	ACA1_220770	NW_004457380.1	963357	964392	R	encoded by transcript ACA1_220770A; urease accessory protein UreG, putative	complement(join(963357..963488,963565..963845,963939..964115,964311..964392))	Acanthamoeba castellanii str. Neff	14915891
ACA1_220780	CDS	ACA1_220780	NW_004457380.1	964953	969368	D	encoded by transcript ACA1_220780A; urease, gamma subunit	join(964953..965156,965341..965579,965659..965979,966175..966577,966658..966748,966970..967036,967215..967288,967380..967490,967585..967700,967813..967954,968040..968110,968233..968308,968423..968514,968604..968851,968934..969050,969134..969209,969306..969368)	Acanthamoeba castellanii str. Neff	14915892
ACA1_220790	CDS	ACA1_220790	NW_004457380.1	969742	971487	D	encoded by transcript ACA1_220790A; Fbox domain containing protein	join(969742..971003,971211..971487)	Acanthamoeba castellanii str. Neff	14915893
ACA1_220900	CDS	ACA1_220900	NW_004457380.1	971870	975041	R	encoded by transcript ACA1_220900A; MYND finger domain containing protein	complement(join(971870..971956,972043..972138,972232..972326,972417..972594,972738..973534,973698..973826,973903..974005,974082..974144,974241..974379,974455..974897,975024..975041))	Acanthamoeba castellanii str. Neff	14915894
ACA1_221010	CDS	ACA1_221010	NW_004457380.1	975552	976925	D	encoded by transcript ACA1_221010A; Fbox domain containing protein	975552..976925	Acanthamoeba castellanii str. Neff	14915895
ACA1_221020	CDS	ACA1_221020	NW_004457380.1	977305	981571	R	encoded by transcript ACA1_221020A; MYND finger domain containing protein	complement(join(977305..977391,977476..977571,977665..977759,977844..978021,978116..978903,979087..979131,979200..979709,979861..979956,980013..980141,980218..980320,980393..980455,980552..980690,980778..981223,981354..981487,981556..981571))	Acanthamoeba castellanii str. Neff	14915605
ACA1_221030	CDS	ACA1_221030	NW_004457380.1	981743	982894	R	encoded by transcript ACA1_221030A; uncharacterized protein	complement(join(981743..981908,981957..982040,982108..982208,982283..982349,982410..982492,982572..982682,982775..982894))	Acanthamoeba castellanii str. Neff	14915606
ACA1_221040	CDS	ACA1_221040	NW_004457380.1	984224	984704	D	encoded by transcript ACA1_221040A; uncharacterized protein	join(984224..984481,984561..984704)	Acanthamoeba castellanii str. Neff	14915607
ACA1_221050	CDS	ACA1_221050	NW_004457380.1	985027	987607	R	encoded by transcript ACA1_221050A; uncharacterized protein	complement(join(985027..985167,985357..985422,985506..985556,985685..985774,985952..985996,986071..986157,986243..986359,986438..986533,986599..986656,986756..986819,986900..987080,987155..987226,987314..987607))	Acanthamoeba castellanii str. Neff	14915608
ACA1_221060	CDS	ACA1_221060	NW_004457380.1	987785	990132	R	encoded by transcript ACA1_221060A; leucine rich repeat domain containing protein	complement(join(987785..988294,988379..988629,988705..988839,988954..989055,989127..989276,989336..989515,989587..989758,989836..990132))	Acanthamoeba castellanii str. Neff	14915609
ACA1_221070	CDS	ACA1_221070	NW_004457380.1	990473	992564	D	encoded by transcript ACA1_221070A; carrier superfamily protein	join(<990473..990584,990725..990772,990905..990984,991229..991320,991396..991477,991544..991657,991740..991801,991870..991939,992021..992132,992277..992396,992497..992564)	Acanthamoeba castellanii str. Neff	14915610
ACA1_221080	CDS	ACA1_221080	NW_004457380.1	993118	996755	D	encoded by transcript ACA1_221080A; LIM domain containing protein	join(993118..993633,993757..996407,996497..996562,996638..996755)	Acanthamoeba castellanii str. Neff	14915611
ACA1_221090	CDS	ACA1_221090	NW_004457380.1	997041	997930	R	encoded by transcript ACA1_221090A; Peptidylprolyl cis-trans isomerase	complement(join(997041..997258,997341..997413,997497..997606,997682..997736,997925..997930))	Acanthamoeba castellanii str. Neff	14915612
ACA1_221200	CDS	ACA1_221200	NW_004457380.1	1004237	1005050	D	encoded by transcript ACA1_221200A; uncharacterized protein	join(1004237..1004648,1004839..1005050)	Acanthamoeba castellanii str. Neff	14915613
ACA1_221210	CDS	ACA1_221210	NW_004457380.1	1005361	1007011	D	encoded by transcript ACA1_221210A; uncharacterized protein	join(1005361..1006320,1006398..1006484,1006556..1006639,1006707..1006794,1006887..1007011)	Acanthamoeba castellanii str. Neff	14915614
ACA1_221320	CDS	ACA1_221320	NW_004457380.1	1013276	1013662	D	encoded by transcript ACA1_221320A; uncharacterized protein	join(1013276..1013359,1013468..1013662)	Acanthamoeba castellanii str. Neff	14915615
ACA1_221330	CDS	ACA1_221330	NW_004457380.1	1013739	1017219	R	encoded by transcript ACA1_221330A; uncharacterized protein	complement(join(1013739..1014754,1014830..1014884,1014916..1014922,1014991..1015081,1015162..1015224,1015510..1015584,1015680..1015775,1015847..1015942,1016047..1016124,1016211..1016264,1016376..1016453,1016587..1016699,1016882..1017029,1017165..1017219))	Acanthamoeba castellanii str. Neff	14915616
ACA1_221350	CDS	ACA1_221350	NW_004457380.1	1020495	1022983	D	encoded by transcript ACA1_221350A; udpn-acetylglucosamine--peptide n-acetylglucosaminyltransferase spindly, putative	join(1020495..1020756,1020906..1021006,1021134..1021256,1021339..1021437,1021632..1021737,1021832..1022025,1022132..1022324,1022434..1022515,1022636..1022755,1022884..1022983)	Acanthamoeba castellanii str. Neff	14915618
ACA1_221360	CDS	ACA1_221360	NW_004457380.1	1023061	1024938	D	encoded by transcript ACA1_221360A; udpn-acetylglucosamine--peptide n-acetylglucosaminyltransferase spindly, putative	join(1023061..1023159,1023255..1023419,1023542..1023607,1023866..1024049,1024155..1024377,1024438..1024550,1024655..1024747,1024841..1024938)	Acanthamoeba castellanii str. Neff	14915619
ACA1_221370	CDS	ACA1_221370	NW_004457380.1	1025075	1026435	D	encoded by transcript ACA1_221370A; uncharacterized protein	join(1025075..1025298,1025412..1025549,1025683..1026002,1026126..1026203,1026332..1026435)	Acanthamoeba castellanii str. Neff	14915603
ACA1_011260	CDS	ACA1_011260	NW_004457379.1	33	2953	D	encoded by transcript ACA1_011260A; myosin I heavy chain kinase	join(33..179,401..551,651..946,1124..1530,1688..1849,1971..2103,2188..2397,2529..2753,2873..2953)	Acanthamoeba castellanii str. Neff	14915582
ACA1_011270	CDS	ACA1_011270	NW_004457379.1	4281	6962	R	encoded by transcript ACA1_011270A; UDPglucoronosyl and UDP-glucosyl transferase superfamily protein	complement(join(4281..4454,4543..4706,4785..4881,4951..5055,5145..5387,5511..5600,5696..5814,5921..6074,6174..6307,6373..6469,6572..6645,6752..6962))	Acanthamoeba castellanii str. Neff	14915583
ACA1_011280	CDS	ACA1_011280	NW_004457379.1	7180	10217	D	encoded by transcript ACA1_011280A; ATPase, AAA domain containing protein	join(7180..7509,7637..7698,7769..7877,7960..8050,8124..8206,8282..8404,8500..8736,8823..8926,9020..9152,9313..9478,9594..9713,9843..9990,10079..10217)	Acanthamoeba castellanii str. Neff	14915581
ACA1_299160	CDS	ACA1_299160	NW_004457378.1	7265	8250	D	encoded by transcript ACA1_299160A; phosphoglucomutase 2like 1, putative	join(7265..7291,7360..7455,7560..7710,7822..7938,8026..8068,8148..8250)	Acanthamoeba castellanii str. Neff	14915580
ACA1_299270	CDS	ACA1_299270	NW_004457378.1	8788	9441	D	encoded by transcript ACA1_299270A; uncharacterized protein	join(8788..8928,9145..>9441)	Acanthamoeba castellanii str. Neff	14915578
ACA1_299380	CDS	ACA1_299380	NW_004457378.1	11192	14568	D	encoded by transcript ACA1_299380A; zinc finger, NFX1-type containing 1, putative	join(11192..11354,11420..11667,11747..11848,11886..12070,12142..12828,13880..14025,14094..14190,14265..14568)	Acanthamoeba castellanii str. Neff	14915579
ACA1_019580	CDS	ACA1_019580	NW_004457377.1	13903	14599	D	encoded by transcript ACA1_019580A; uncharacterized protein	join(13903..14274,14387..14599)	Acanthamoeba castellanii str. Neff	14915574
ACA1_019590	CDS	ACA1_019590	NW_004457377.1	14747	15269	D	encoded by transcript ACA1_019590A; uncharacterized protein	join(14747..14790,14882..15136,15221..15269)	Acanthamoeba castellanii str. Neff	14915569
ACA1_019600	CDS	ACA1_019600	NW_004457377.1	16856	19155	D	encoded by transcript ACA1_019600A; cytochrome p450 superfamily protein	join(16856..16978,17111..17301,17391..17529,17598..17680,17789..18030,18103..18203,18291..18391,18491..18572,18664..18846,18932..19013,19082..19155)	Acanthamoeba castellanii str. Neff	14915577
ACA1_019610	CDS	ACA1_019610	NW_004457377.1	19295	25070	R	encoded by transcript ACA1_019610A; FHA domain containing protein	complement(join(19295..20000,20099..20246,20397..20536,20612..21628,21717..22082,22249..22521,22627..22775,22897..22986,23078..23377,23528..23692,23802..24185,24319..24671,24884..25070))	Acanthamoeba castellanii str. Neff	14915575
ACA1_019620	CDS	ACA1_019620	NW_004457377.1	26042	27466	D	encoded by transcript ACA1_019620A; Ras association (RalGDS/AF6) domain containing protein	join(26042..26097,26193..26308,26434..26523,26616..27466)	Acanthamoeba castellanii str. Neff	14915576
ACA1_019630	CDS	ACA1_019630	NW_004457377.1	27804	28953	D	encoded by transcript ACA1_019630A; CCCH zinc finger protein, putative	join(27804..27938,27988..28060,28074..28767,28857..28953)	Acanthamoeba castellanii str. Neff	14915570
ACA1_019640	CDS	ACA1_019640	NW_004457377.1	29196	29590	R	encoded by transcript ACA1_019640A; DSS1/SEM1 family protein	complement(join(29196..29238,29311..29407,29506..29590))	Acanthamoeba castellanii str. Neff	14915571
ACA1_019650	CDS	ACA1_019650	NW_004457377.1	29735	31721	D	encoded by transcript ACA1_019650A; uncharacterized protein	join(29735..30010,30075..30446,30526..30612,30726..30757,30846..31159,31248..31334,31457..31563,31662..>31721)	Acanthamoeba castellanii str. Neff	14915572
ACA1_019760	CDS	ACA1_019760	NW_004457377.1	34852	35088	D	encoded by transcript ACA1_019760A; major vault protein	34852..35088	Acanthamoeba castellanii str. Neff	14915573
ACA1_050860	CDS	ACA1_050860	NW_004457376.1	502	880	R	encoded by transcript ACA1_050860A; RAS and EFhand domain containing, putative	complement(join(<502..581,667..880))	Acanthamoeba castellanii str. Neff	14915544
ACA1_050870	CDS	ACA1_050870	NW_004457376.1	1061	1502	D	encoded by transcript ACA1_050870A; RNA recognition motif domain containing protein	join(1061..1230,1286..1502)	Acanthamoeba castellanii str. Neff	14915568
ACA1_050880	CDS	ACA1_050880	NW_004457376.1	1802	2734	D	encoded by transcript ACA1_050880A; uncharacterized protein	join(1802..2228,2305..2381,2442..2597,2650..>2734)	Acanthamoeba castellanii str. Neff	14915537
ACA1_050990	CDS	ACA1_050990	NW_004457376.1	2896	3605	D	encoded by transcript ACA1_050990A; Serine/threonine specific protein phosphatase	join(<2896..3034,3106..3172,3214..3353,3421..3605)	Acanthamoeba castellanii str. Neff	14915538
ACA1_051000	CDS	ACA1_051000	NW_004457376.1	3733	4192	D	encoded by transcript ACA1_051000A; RecF/RecN/SMC domain containing protein	join(3733..3900,3979..4128,4151..4192)	Acanthamoeba castellanii str. Neff	14915539
ACA1_051110	CDS	ACA1_051110	NW_004457376.1	6248	7273	D	encoded by transcript ACA1_051110A; uncharacterized protein	join(<6248..6496,6560..6773,6840..>7273)	Acanthamoeba castellanii str. Neff	14915540
ACA1_051220	CDS	ACA1_051220	NW_004457376.1	9219	9988	D	encoded by transcript ACA1_051220A; uncharacterized protein	join(<9219..9507,9598..9730,9817..>9988)	Acanthamoeba castellanii str. Neff	14915541
ACA1_051440	CDS	ACA1_051440	NW_004457376.1	12423	16133	D	encoded by transcript ACA1_051440A; DNA replication helicase, putative	join(<12423..12553,12675..13241,13368..13773,13878..14149,14213..14345,14440..14572,14705..14814,14990..15151,15236..15553,15691..15747,15813..15902,15966..16133)	Acanthamoeba castellanii str. Neff	14915543
ACA1_051450	CDS	ACA1_051450	NW_004457376.1	16210	18094	R	encoded by transcript ACA1_051450A; uncharacterized protein	complement(join(16210..16391,16474..16584,16652..16833,16971..17108,17213..17304,17398..17583,17659..17719,17775..18094))	Acanthamoeba castellanii str. Neff	14915557
ACA1_051460	CDS	ACA1_051460	NW_004457376.1	18278	18569	R	encoded by transcript ACA1_051460A; uncharacterized protein	complement(join(18278..18415,18495..18569))	Acanthamoeba castellanii str. Neff	14915558
ACA1_051470	CDS	ACA1_051470	NW_004457376.1	18817	19202	R	encoded by transcript ACA1_051470A; alkylated DNA repair protein	complement(join(18817..18911,19004..19202))	Acanthamoeba castellanii str. Neff	14915559
ACA1_051490	CDS	ACA1_051490	NW_004457376.1	21739	22860	R	encoded by transcript ACA1_051490A; Cysteine proteinase 5, putative	complement(join(21739..21801,21867..22396,22473..22860))	Acanthamoeba castellanii str. Neff	14915561
ACA1_051500	CDS	ACA1_051500	NW_004457376.1	24258	25409	D	encoded by transcript ACA1_051500A; uncharacterized protein	24258..25409	Acanthamoeba castellanii str. Neff	14915562
ACA1_051510	CDS	ACA1_051510	NW_004457376.1	25692	26450	R	encoded by transcript ACA1_051510A; MYND finger domain containing protein	complement(25692..26450)	Acanthamoeba castellanii str. Neff	14915563
ACA1_051520	CDS	ACA1_051520	NW_004457376.1	26572	27201	R	encoded by transcript ACA1_051520A; uncharacterized protein	complement(join(26572..26750,26934..27201))	Acanthamoeba castellanii str. Neff	14915564
ACA1_051530	CDS	ACA1_051530	NW_004457376.1	27832	31060	R	encoded by transcript ACA1_051530A; transporter, major facilitator subfamily protein	complement(join(27832..28047,28130..28179,28241..28367,28456..28568,28660..28737,28819..28885,28991..29091,29190..29744,29841..29949,30021..30114,30201..30293,30443..30496,30570..31060))	Acanthamoeba castellanii str. Neff	14915565
ACA1_051540	CDS	ACA1_051540	NW_004457376.1	31525	35130	R	encoded by transcript ACA1_051540A; RasGEF domain containing protein	complement(join(31525..31690,31770..31854,31942..32065,32149..32241,32312..32566,32655..32913,33004..33160,33246..33399,33664..33711,33813..34073,34148..34245,34323..35130))	Acanthamoeba castellanii str. Neff	14915566
ACA1_051550	CDS	ACA1_051550	NW_004457376.1	35797	37520	R	encoded by transcript ACA1_051550A; phenylalanine hydroxylase	complement(join(35797..35889,35958..36158,36243..36338,36413..36675,36762..37118,37211..37520))	Acanthamoeba castellanii str. Neff	14915567
ACA1_051660	CDS	ACA1_051660	NW_004457376.1	42038	45427	R	encoded by transcript ACA1_051660A; DNA repair and recombination protein RAD54B, putative	complement(join(42038..42240,42307..42323,42405..42488,42568..42628,42733..42945,43016..43100,43141..43242,43273..43346,43429..43501,43582..43740,43820..43915,43985..44203,44271..44331,44397..44552,44624..44665,44725..44893,44956..45019,45102..45158,45218..45306,45382..45427))	Acanthamoeba castellanii str. Neff	14915527
ACA1_051670	CDS	ACA1_051670	NW_004457376.1	45956	47841	R	encoded by transcript ACA1_051670A; aminotransferase, class V superfamily protein	complement(join(45956..46097,46164..46300,46377..46882,46951..47146,47215..47343,47443..47540,47619..47841))	Acanthamoeba castellanii str. Neff	14915528
ACA1_051680	CDS	ACA1_051680	NW_004457376.1	48080	49834	D	encoded by transcript ACA1_051680A; Ras subfamily protein	join(48080..48175,48251..48348,48407..48486,48560..48795,48869..49001,49083..49145,49217..49510,49604..49738,49773..49834)	Acanthamoeba castellanii str. Neff	14915529
ACA1_051690	CDS	ACA1_051690	NW_004457376.1	50176	51241	R	encoded by transcript ACA1_051690A; methionineR-sulfoxide reductase	complement(join(50176..50313,50402..50494,50553..50747,50855..51043,51137..51241))	Acanthamoeba castellanii str. Neff	14915530
ACA1_051700	CDS	ACA1_051700	NW_004457376.1	51320	54365	D	encoded by transcript ACA1_051700A; FGGAP repeat domain containing protein	join(51320..51480,51548..51591,51694..51800,51902..51992,52077..52173,52260..52394,52491..52608,52768..52935,53016..53094,53191..53303,53394..53537,53625..53755,53831..53909,54022..54278,54344..54365)	Acanthamoeba castellanii str. Neff	14915531
ACA1_051710	CDS	ACA1_051710	NW_004457376.1	54758	58304	R	encoded by transcript ACA1_051710A; uncharacterized protein	complement(join(54758..54883,55006..55443,55581..55748,56143..56427,56522..56598,56753..58304))	Acanthamoeba castellanii str. Neff	14915532
ACA1_051820	CDS	ACA1_051820	NW_004457376.1	58613	59098	D	encoded by transcript ACA1_051820A; ubiquitin family protein	join(58613..58636,58742..58958,59028..59098)	Acanthamoeba castellanii str. Neff	14915533
ACA1_051830	CDS	ACA1_051830	NW_004457376.1	59285	60160	R	encoded by transcript ACA1_051830A; mitotic spindle checkpoint protein MAD2, putative	complement(join(59285..59329,59402..59627,59695..59809,59866..59996,60047..60119,60142..60160))	Acanthamoeba castellanii str. Neff	14915534
ACA1_051840	CDS	ACA1_051840	NW_004457376.1	60752	62858	R	encoded by transcript ACA1_051840A; RNA recognition motif domain containing protein	complement(join(60752..60925,61006..61982,62066..62620,62696..62858))	Acanthamoeba castellanii str. Neff	14915535
ACA1_051850	CDS	ACA1_051850	NW_004457376.1	63136	64814	D	encoded by transcript ACA1_051850A; translation elongation factor Tu, putative	join(63136..63247,63317..63483,63577..63703,63785..64192,64279..64814)	Acanthamoeba castellanii str. Neff	14915536
ACA1_051860	CDS	ACA1_051860	NW_004457376.1	65320	68138	D	encoded by transcript ACA1_051860A; MAP/microtubule affinityregulating kinase	join(65320..65538,65617..65751,65840..65980,66097..66354,66432..68138)	Acanthamoeba castellanii str. Neff	14915545
ACA1_051870	CDS	ACA1_051870	NW_004457376.1	68734	70518	D	encoded by transcript ACA1_051870A; serine/threonine kinase 24, putative	join(68734..68782,68827..68893,68967..69174,69246..69354,69428..69926,70003..70145,70220..70518)	Acanthamoeba castellanii str. Neff	14915546
ACA1_051880	CDS	ACA1_051880	NW_004457376.1	70979	71594	R	encoded by transcript ACA1_051880A; autophagy protein 8 (ATG8), putative	complement(join(70979..71070,71180..71298,71364..71472,71561..71594))	Acanthamoeba castellanii str. Neff	14915547
ACA1_051890	CDS	ACA1_051890	NW_004457376.1	72090	76286	D	encoded by transcript ACA1_051890A; uncharacterized protein	join(72090..72302,72370..72822,72967..73236,73317..73429,73512..73686,73802..73945,74032..74241,74322..74606,74712..75259,75366..75597,75678..75843,75915..75985,76146..76286)	Acanthamoeba castellanii str. Neff	14915548
ACA1_051900	CDS	ACA1_051900	NW_004457376.1	76351	79634	D	encoded by transcript ACA1_051900A; dedicator of cytokinesis 6, putative	join(76351..76467,76572..77837,77928..78060,78226..78427,78547..78679,79170..79264,79374..79506,79584..79634)	Acanthamoeba castellanii str. Neff	14915549
ACA1_051910	CDS	ACA1_051910	NW_004457376.1	79796	84221	R	encoded by transcript ACA1_051910A; twocomponent hybrid sensor and regulator kinase	complement(join(79796..79915,79992..80168,80238..80297,80400..81138,81257..81363,81482..81566,81638..81810,81909..82237,82318..82512,82597..82676,82782..83176,83289..83441,83541..83639,83710..83822,83908..83993,84133..84221))	Acanthamoeba castellanii str. Neff	14915550
ACA1_051920	CDS	ACA1_051920	NW_004457376.1	85125	87460	D	encoded by transcript ACA1_051920A; uncharacterized protein	join(85125..85346,85560..85639,85733..85814,85885..85977,86067..86186,86269..86344,86430..86481,86587..86662,86753..86845,86942..87076,87179..87260,87342..87460)	Acanthamoeba castellanii str. Neff	14915551
ACA1_051930	CDS	ACA1_051930	NW_004457376.1	87895	88578	D	encoded by transcript ACA1_051930A; uncharacterized protein	join(<87895..88419,88534..88578)	Acanthamoeba castellanii str. Neff	14915552
ACA1_051940	CDS	ACA1_051940	NW_004457376.1	88833	90471	R	encoded by transcript ACA1_051940A; strictosidine synthase subfamily protein	complement(join(88833..88988,89131..89350,89420..89741,89825..89903,89950..90119,90192..90236,90294..90471))	Acanthamoeba castellanii str. Neff	14915553
ACA1_051950	CDS	ACA1_051950	NW_004457376.1	90729	91004	R	encoded by transcript ACA1_051950A; uncharacterized protein	complement(90729..91004)	Acanthamoeba castellanii str. Neff	14915554
ACA1_052060	CDS	ACA1_052060	NW_004457376.1	96459	96749	D	encoded by transcript ACA1_052060A; uncharacterized protein	96459..96749	Acanthamoeba castellanii str. Neff	14915555
ACA1_052070	CDS	ACA1_052070	NW_004457376.1	97097	97683	D	encoded by transcript ACA1_052070A; FAD dependent oxidoreductase	join(97097..97235,97309..97515,97583..>97683)	Acanthamoeba castellanii str. Neff	14915556
ACA1_325100	CDS	ACA1_325100	NW_004457375.1	104	3334	D	encoded by transcript ACA1_325100A; calponin domain containing protein	join(104..739,815..966,1053..1237,1365..1585,1733..1921,2025..2161,2242..2505,2623..3064,3203..3334)	Acanthamoeba castellanii str. Neff	14915526
ACA1_325110	CDS	ACA1_325110	NW_004457375.1	3479	4962	R	encoded by transcript ACA1_325110A; 3'5' exonuclease domain containing protein	complement(join(3479..3646,3822..4005,4131..4281,4356..4490,4579..4629,4698..4962))	Acanthamoeba castellanii str. Neff	14915525
ACA1_325120	CDS	ACA1_325120	NW_004457375.1	5195	7059	R	encoded by transcript ACA1_325120A; uncharacterized protein	complement(join(5195..5581,5667..5804,6034..6142,6263..6347,6436..6623,6701..7059))	Acanthamoeba castellanii str. Neff	14915505
ACA1_325130	CDS	ACA1_325130	NW_004457375.1	7318	8206	R	encoded by transcript ACA1_325130A; uncharacterized protein	complement(join(7318..7524,7605..7702,7789..8022,8134..8206))	Acanthamoeba castellanii str. Neff	14915506
ACA1_325140	CDS	ACA1_325140	NW_004457375.1	8365	10127	R	encoded by transcript ACA1_325140A; uncharacterized protein	complement(join(8365..8516,8636..8727,8819..8958,9067..9172,9305..9380,9455..9620,9662..9738,9842..10127))	Acanthamoeba castellanii str. Neff	14915507
ACA1_325150	CDS	ACA1_325150	NW_004457375.1	10580	11769	D	encoded by transcript ACA1_325150A; Rab7/RabGfamily small GTPase	join(10580..10629,10701..10827,10948..11025,11138..11281,11389..11453,11529..11609,11697..11769)	Acanthamoeba castellanii str. Neff	14915508
ACA1_325160	CDS	ACA1_325160	NW_004457375.1	12052	13586	D	encoded by transcript ACA1_325160A; Rab7/RabGfamily small GTPase	join(12052..12095,12295..12370,12441..12497,12735..12809,12975..13046,13165..13226,13338..13430,13505..13586)	Acanthamoeba castellanii str. Neff	14915509
ACA1_325170	CDS	ACA1_325170	NW_004457375.1	13829	15600	R	encoded by transcript ACA1_325170A; AP3 complex subunit mu, putative	complement(join(13829..14063,14195..14416,14538..15371,15566..15600))	Acanthamoeba castellanii str. Neff	14915510
ACA1_325180	CDS	ACA1_325180	NW_004457375.1	15967	18247	R	encoded by transcript ACA1_325180A; ribonuclease L inhibitor family protein	complement(join(15967..17009,17098..17183,17279..17375,17467..17695,17778..17849,17933..18247))	Acanthamoeba castellanii str. Neff	14915511
ACA1_325190	CDS	ACA1_325190	NW_004457375.1	18459	18924	D	encoded by transcript ACA1_325190A; CCAATbox binding transcription factor subunit HAP3-related, putative	join(18459..18515,18616..18683,18759..18924)	Acanthamoeba castellanii str. Neff	14915512
ACA1_325210	CDS	ACA1_325210	NW_004457375.1	27924	31704	D	encoded by transcript ACA1_325210A; arsenical pump membrane protein	join(27924..28259,28589..28784,28891..29048,29160..29303,29418..29570,29652..29780,29959..30088,30175..30308,30395..30781,30893..31057,31213..31417,31538..31704)	Acanthamoeba castellanii str. Neff	14915514
ACA1_325220	CDS	ACA1_325220	NW_004457375.1	31938	33445	R	encoded by transcript ACA1_325220A; uncharacterized protein	complement(join(31938..32369,32549..32710,32794..32977,33071..33198,33263..33445))	Acanthamoeba castellanii str. Neff	14915515
ACA1_325230	CDS	ACA1_325230	NW_004457375.1	33614	34324	R	encoded by transcript ACA1_325230A; MAPEG domain containing protein	complement(join(33614..33813,33909..34101,34208..34324))	Acanthamoeba castellanii str. Neff	14915516
ACA1_325240	CDS	ACA1_325240	NW_004457375.1	35075	36612	D	encoded by transcript ACA1_325240A; uncharacterized protein	join(35075..35095,35232..35319,35720..35838,35932..36612)	Acanthamoeba castellanii str. Neff	14915517
ACA1_325250	CDS	ACA1_325250	NW_004457375.1	36908	37425	D	encoded by transcript ACA1_325250A; ribosomal protein L44, putative	join(36908..36919,37029..37134,37220..37425)	Acanthamoeba castellanii str. Neff	14915518
ACA1_325260	CDS	ACA1_325260	NW_004457375.1	37844	43450	D	encoded by transcript ACA1_325260A; peptidylprolyl cis-trans isomerase, FKBP-type domain containing protein	join(37844..37923,38027..38183,38357..38470,38580..38753,38859..38988,39066..39583,39728..39977,40063..40178,40272..40561,40626..43058,43159..43450)	Acanthamoeba castellanii str. Neff	14915519
ACA1_325270	CDS	ACA1_325270	NW_004457375.1	43653	45214	R	encoded by transcript ACA1_325270A; regulator of g protein signaling domain containing protein	complement(join(43653..43894,44002..44267,44387..44441,44511..44683,44833..44959,45052..45214))	Acanthamoeba castellanii str. Neff	14915520
ACA1_325290	CDS	ACA1_325290	NW_004457375.1	50082	51527	R	encoded by transcript ACA1_325290A; uncharacterized protein	complement(join(50082..50161,50248..50584,50668..50751,50781..50953,51082..51234,51368..51527))	Acanthamoeba castellanii str. Neff	14915522
ACA1_325300	CDS	ACA1_325300	NW_004457375.1	51609	54072	R	encoded by transcript ACA1_325300A; ThiF domain containing protein	complement(join(51609..51781,51846..51984,52090..52217,52378..52495,52628..52729,53079..53169,53278..53443,53541..53637,53743..54072))	Acanthamoeba castellanii str. Neff	14915523
ACA1_325310	CDS	ACA1_325310	NW_004457375.1	54188	55516	D	encoded by transcript ACA1_325310A; uncharacterized protein	join(54188..54479,54628..54866,54946..55138,55230..55516)	Acanthamoeba castellanii str. Neff	14915524
ACA1_306670	CDS	ACA1_306670	NW_004457374.1	8	2798	R	encoded by transcript ACA1_306670A; uncharacterized protein	complement(join(<8..157,240..295,413..556,626..842,1004..1096,1218..1316,1389..1480,1561..1648,1714..1788,1900..2100,2226..2294,2712..2798))	Acanthamoeba castellanii str. Neff	14915504
ACA1_306680	CDS	ACA1_306680	NW_004457374.1	2937	4761	D	encoded by transcript ACA1_306680A; centromere protein	join(2937..3024,3118..3297,3377..3424,3564..3647,3728..3810,3899..4001,4107..4215,4345..4388,4475..4614,4702..4761)	Acanthamoeba castellanii str. Neff	14915491
ACA1_306690	CDS	ACA1_306690	NW_004457374.1	4952	6277	R	encoded by transcript ACA1_306690A; Gammasecretase subunit APH-1B, putative	complement(join(4952..5095,5182..5321,5430..5555,5648..5730,5854..5997,6165..6277))	Acanthamoeba castellanii str. Neff	14915501
ACA1_306700	CDS	ACA1_306700	NW_004457374.1	6404	8608	D	encoded by transcript ACA1_306700A; F-box domain containing protein	join(6404..6542,6704..6831,7357..7366,7449..7515,7666..7734,7867..7946,8102..8189,8275..8439,8557..8608)	Acanthamoeba castellanii str. Neff	14915502
ACA1_306810	CDS	ACA1_306810	NW_004457374.1	9170	11461	D	encoded by transcript ACA1_306810A; phenazine biosynthesis protein, PhzF family protein	join(9170..9636,9731..9785,9876..10091,10186..10314,10459..10503,10602..11246,11327..11461)	Acanthamoeba castellanii str. Neff	14915503
ACA1_306820	CDS	ACA1_306820	NW_004457374.1	11661	12343	R	encoded by transcript ACA1_306820A; uncharacterized protein	complement(join(11661..12182,12308..12343))	Acanthamoeba castellanii str. Neff	14915492
ACA1_306830	CDS	ACA1_306830	NW_004457374.1	12871	14464	R	encoded by transcript ACA1_306830A; uncharacterized protein	complement(join(12871..13027,13095..14464))	Acanthamoeba castellanii str. Neff	14915493
ACA1_306840	CDS	ACA1_306840	NW_004457374.1	16186	19938	D	encoded by transcript ACA1_306840A; HEAT repeat domain containing protein	join(16186..16589,16681..16847,16973..17040,17095..17533,17629..17866,17945..18142,18223..18316,18416..18559,18694..18793,18877..19063,19167..19305,19475..19565,19637..19938)	Acanthamoeba castellanii str. Neff	14915494
ACA1_306850	CDS	ACA1_306850	NW_004457374.1	20031	21107	D	encoded by transcript ACA1_306850A; RanBPMrelated, putative	join(20031..20214,20363..20589,20678..20789,20861..20973,21054..21107)	Acanthamoeba castellanii str. Neff	14915495
ACA1_306860	CDS	ACA1_306860	NW_004457374.1	21437	21874	R	encoded by transcript ACA1_306860A; acyl carrier protein	complement(21437..21874)	Acanthamoeba castellanii str. Neff	14915496
ACA1_306870	CDS	ACA1_306870	NW_004457374.1	22508	23426	D	encoded by transcript ACA1_306870A; uncharacterized protein	join(22508..22604,22682..22707,22799..22984,23066..23219,23347..23426)	Acanthamoeba castellanii str. Neff	14915497
ACA1_306880	CDS	ACA1_306880	NW_004457374.1	23491	24872	R	encoded by transcript ACA1_306880A; zinc finger, c2h2 type domain containing protein	complement(join(23491..23700,23826..24872))	Acanthamoeba castellanii str. Neff	14915498
ACA1_306890	CDS	ACA1_306890	NW_004457374.1	25097	25951	R	encoded by transcript ACA1_306890A; uncharacterized protein	complement(join(25097..25759,25802..25951))	Acanthamoeba castellanii str. Neff	14915499
ACA1_306900	CDS	ACA1_306900	NW_004457374.1	26612	28207	R	encoded by transcript ACA1_306900A; uncharacterized protein	complement(join(26612..27361,27469..27716,27857..28096,28144..28207))	Acanthamoeba castellanii str. Neff	14915500
ACA1_129210	CDS	ACA1_129210	NW_004457373.1	181	1582	D	encoded by transcript ACA1_129210A; WD domain, G-beta repeat-containing protein	join(181..250,356..799,862..972,1075..1170,1252..1382,1448..1582)	Acanthamoeba castellanii str. Neff	14915445
ACA1_129220	CDS	ACA1_129220	NW_004457373.1	1691	2398	D	encoded by transcript ACA1_129220A; Nucleoside-triphosphatase	join(1691..2029,2105..2398)	Acanthamoeba castellanii str. Neff	14915441
ACA1_129230	CDS	ACA1_129230	NW_004457373.1	2900	3436	D	encoded by transcript ACA1_129230A; uncharacterized protein	2900..>3436	Acanthamoeba castellanii str. Neff	14915442
ACA1_129340	CDS	ACA1_129340	NW_004457373.1	5591	6696	D	encoded by transcript ACA1_129340A; endothelin converting enzyme 2, putative	join(<5591..5656,5757..5810,5877..6027,6114..6133,6210..6286,6410..6522,6620..6696)	Acanthamoeba castellanii str. Neff	14915443
ACA1_129350	CDS	ACA1_129350	NW_004457373.1	8741	9920	D	encoded by transcript ACA1_129350A; 4alpha-methyl-sterol C4-methyl-oxidase	join(8741..8929,9054..9173,9238..9343,9408..9563,9632..9764,9827..9920)	Acanthamoeba castellanii str. Neff	14915444
ACA1_129360	CDS	ACA1_129360	NW_004457373.1	10065	10696	R	encoded by transcript ACA1_129360A; uncharacterized protein	complement(join(10065..10303,10329..10402,10659..10696))	Acanthamoeba castellanii str. Neff	14915440
ACA1_129370	CDS	ACA1_129370	NW_004457373.1	11095	12383	D	encoded by transcript ACA1_129370A; GRAM domain containing protein	join(11095..11133,11167..11272,11376..11464,11585..11680,11786..11892,11993..12383)	Acanthamoeba castellanii str. Neff	14915426
ACA1_129380	CDS	ACA1_129380	NW_004457373.1	12570	13155	D	encoded by transcript ACA1_129380A; GRAM domain containing protein	join(12570..12662,12753..12846,13025..13155)	Acanthamoeba castellanii str. Neff	14915427
ACA1_129390	CDS	ACA1_129390	NW_004457373.1	13818	16877	R	encoded by transcript ACA1_129390A; adenosine deaminase	complement(join(13818..13961,14083..14315,14410..14487,14569..14666,14742..14838,14963..15101,15252..15364,15443..15593,15605..15634,15697..15791,16007..16119,16205..16281,16386..16462,16567..16669,16755..16877))	Acanthamoeba castellanii str. Neff	14915428
ACA1_129500	CDS	ACA1_129500	NW_004457373.1	17344	18262	D	encoded by transcript ACA1_129500A; E3 ubiquitin-protein ligase RING2, putative	join(17344..17666,17696..17789,17864..18262)	Acanthamoeba castellanii str. Neff	14915429
ACA1_129510	CDS	ACA1_129510	NW_004457373.1	18486	20151	D	encoded by transcript ACA1_129510A; hydrolase, alpha/beta fold domain containing protein	join(18486..18654,18717..18795,18889..18998,19073..19205,19298..19432,19506..19588,19664..19764,19843..19962,20044..20151)	Acanthamoeba castellanii str. Neff	14915473
ACA1_129520	CDS	ACA1_129520	NW_004457373.1	20246	23197	D	encoded by transcript ACA1_129520A; elongation factor Tu GTP binding domain containing protein	join(20246..20272,20444..20644,20731..20788,20885..21031,21155..21255,21361..21436,21489..21604,21686..21740,21837..21906,21985..22058,22077..22223,22407..22488,22562..22744,22857..22977,23066..23197)	Acanthamoeba castellanii str. Neff	14915474
ACA1_129530	CDS	ACA1_129530	NW_004457373.1	23370	24323	D	encoded by transcript ACA1_129530A; uncharacterized protein	join(23370..23549,23817..23985,24085..24323)	Acanthamoeba castellanii str. Neff	14915475
ACA1_129540	CDS	ACA1_129540	NW_004457373.1	24381	28527	D	encoded by transcript ACA1_129540A; elongation factor Tu GTP binding domain containing protein	join(24381..24616,24689..24769,24847..24907,25259..25389,25519..25578,25667..25754,25915..25984,26142..26368,26692..26892,26979..27036,27147..27293,27417..27517,27586..27661,27677..27837,27928..27982,28086..28155,28218..28254,28396..28527)	Acanthamoeba castellanii str. Neff	14915476
ACA1_129550	CDS	ACA1_129550	NW_004457373.1	28789	29776	R	encoded by transcript ACA1_129550A; adenosine deaminase	complement(join(28789..28800,28885..29032,29145..29319,29445..29571,29642..29776))	Acanthamoeba castellanii str. Neff	14915477
ACA1_129560	CDS	ACA1_129560	NW_004457373.1	29730	31142	D	encoded by transcript ACA1_129560A; tatDrelated DNase, putative	join(29730..29782,29978..30058,30144..30402,30521..30709,30809..30913,31107..31142)	Acanthamoeba castellanii str. Neff	14915431
ACA1_129670	CDS	ACA1_129670	NW_004457373.1	31350	35181	R	encoded by transcript ACA1_129670A; variant sh3 domain containing protein	complement(join(31350..31559,31654..31667,31692..32372,32459..32568,32662..35002,35127..35181))	Acanthamoeba castellanii str. Neff	14915430
ACA1_129680	CDS	ACA1_129680	NW_004457373.1	35688	37640	R	encoded by transcript ACA1_129680A; uncharacterized protein	complement(join(35688..35986,36055..36353,36443..36776,36851..37258,37376..>37640))	Acanthamoeba castellanii str. Neff	14915432
ACA1_129690	CDS	ACA1_129690	NW_004457373.1	38582	42193	D	encoded by transcript ACA1_129690A; TBC domain containing protein	join(38582..39830,39910..40324,40423..40525,40610..40720,40808..40915,41048..41118,41300..41411,41478..41591,41682..41795,41888..42004,42113..42193)	Acanthamoeba castellanii str. Neff	14915433
ACA1_129700	CDS	ACA1_129700	NW_004457373.1	42529	43105	D	encoded by transcript ACA1_129700A; uncharacterized protein	join(42529..42688,42767..>43105)	Acanthamoeba castellanii str. Neff	14915434
ACA1_129910	CDS	ACA1_129910	NW_004457373.1	47211	47942	D	encoded by transcript ACA1_129910A; uncharacterized protein	47211..47942	Acanthamoeba castellanii str. Neff	14915435
ACA1_129920	CDS	ACA1_129920	NW_004457373.1	48040	49802	D	encoded by transcript ACA1_129920A; uncharacterized protein	join(48040..48082,48180..48330,48354..48378,48634..49062,49122..49379,49473..49542,49614..49667,49723..49802)	Acanthamoeba castellanii str. Neff	14915436
ACA1_129930	CDS	ACA1_129930	NW_004457373.1	49991	51229	D	encoded by transcript ACA1_129930A; uncharacterized protein	join(49991..50388,50500..51229)	Acanthamoeba castellanii str. Neff	14915437
ACA1_129940	CDS	ACA1_129940	NW_004457373.1	51334	53743	D	encoded by transcript ACA1_129940A; uncharacterized protein	join(51334..51456,51553..51666,51740..52867,52974..53265,53367..53743)	Acanthamoeba castellanii str. Neff	14915438
ACA1_129950	CDS	ACA1_129950	NW_004457373.1	54071	55817	R	encoded by transcript ACA1_129950A; uncharacterized protein	complement(join(54071..54108,54232..54393,54499..54570,54647..55817))	Acanthamoeba castellanii str. Neff	14915439
ACA1_129960	CDS	ACA1_129960	NW_004457373.1	56071	57778	R	encoded by transcript ACA1_129960A; Ubiquitinconjugating enzyme subfamily protein	complement(join(56071..56195,56285..56971,57055..57217,57330..57437,57551..57778))	Acanthamoeba castellanii str. Neff	14915478
ACA1_129970	CDS	ACA1_129970	NW_004457373.1	59120	63174	D	encoded by transcript ACA1_129970A; cation transport domain containing protein	join(59120..59297,59402..59446,59542..59595,59814..59858,59954..60113,60220..60356,60442..60538,60679..60778,60910..61037,61106..61297,61444..61524,61629..61683,61777..61848,61946..62024,62178..62255,62347..62526,62607..62718,62796..62883,62974..63174)	Acanthamoeba castellanii str. Neff	14915479
ACA1_130180	CDS	ACA1_130180	NW_004457373.1	63478	65189	R	encoded by transcript ACA1_130180A; COP9 subunit, putative	complement(join(63478..63705,63817..63873,63946..64011,64113..64187,64281..64437,64534..64611,64704..64954,65145..65189))	Acanthamoeba castellanii str. Neff	14915480
ACA1_130190	CDS	ACA1_130190	NW_004457373.1	65086	66814	D	encoded by transcript ACA1_130190A; HMGL family domain containing protein	join(65086..65343,65424..65501,65645..66094,66195..66317,66680..66814)	Acanthamoeba castellanii str. Neff	14915482
ACA1_130300	CDS	ACA1_130300	NW_004457373.1	67565	70457	R	encoded by transcript ACA1_130300A; BTB/POZ domain containing protein	complement(join(67565..67942,68026..68249,68453..68519,68614..68756,68847..68996,69096..69174,69538..69740,69810..69941,70061..70195,70349..70457))	Acanthamoeba castellanii str. Neff	14915481
ACA1_130310	CDS	ACA1_130310	NW_004457373.1	71058	71318	R	encoded by transcript ACA1_130310A; sterol desaturase	complement(71058..71318)	Acanthamoeba castellanii str. Neff	14915483
ACA1_130420	CDS	ACA1_130420	NW_004457373.1	71794	72344	D	encoded by transcript ACA1_130420A; uncharacterized protein	join(71794..71845,71909..72218,72278..72344)	Acanthamoeba castellanii str. Neff	14915484
ACA1_130430	CDS	ACA1_130430	NW_004457373.1	72798	73718	R	encoded by transcript ACA1_130430A; uncharacterized protein	complement(72798..73718)	Acanthamoeba castellanii str. Neff	14915485
ACA1_130440	CDS	ACA1_130440	NW_004457373.1	74481	75607	D	encoded by transcript ACA1_130440A; uncharacterized protein	join(74481..74594,74703..74792,74896..74968,75062..75117,75189..75268,75352..75607)	Acanthamoeba castellanii str. Neff	14915486
ACA1_130450	CDS	ACA1_130450	NW_004457373.1	75706	79273	R	encoded by transcript ACA1_130450A; BTB/POZ domain containing protein	complement(join(75706..76187,76299..76752,76880..77082,77226..77292,77391..77533,77638..77787,77900..77978,78373..78575,78642..78773,78893..79027,79165..79273))	Acanthamoeba castellanii str. Neff	14915487
ACA1_130460	CDS	ACA1_130460	NW_004457373.1	79499	80165	R	encoded by transcript ACA1_130460A; C5orf4 protein	complement(join(79499..79864,79968..80165))	Acanthamoeba castellanii str. Neff	14915488
ACA1_130470	CDS	ACA1_130470	NW_004457373.1	81035	82634	D	encoded by transcript ACA1_130470A; carbonate dehydratase, eukaryotictype domain containing protein	join(81035..81173,81247..81295,81399..81509,81592..81673,81777..81905,81965..82042,82105..82232,82330..82414,82491..82634)	Acanthamoeba castellanii str. Neff	14915489
ACA1_130480	CDS	ACA1_130480	NW_004457373.1	82776	87291	R	encoded by transcript ACA1_130480A; RhoGEF domain containing protein	complement(join(82776..82889,83040..83844,83940..84077,84161..84303,84380..84471,84542..84737,84925..85083,85172..85282,85409..85663,85900..86177,86270..86350,86422..86716,86913..87001,87105..87291))	Acanthamoeba castellanii str. Neff	14915490
ACA1_130490	CDS	ACA1_130490	NW_004457373.1	87720	90009	D	encoded by transcript ACA1_130490A; uncharacterized protein	join(87720..87805,87877..88014,88122..88175,88280..88372,88457..88603,88698..88798,88953..89170,89271..89412,89552..89709,89827..90009)	Acanthamoeba castellanii str. Neff	14915446
ACA1_130500	CDS	ACA1_130500	NW_004457373.1	90220	91260	R	encoded by transcript ACA1_130500A; WH2 motif domain containing protein	complement(90220..91260)	Acanthamoeba castellanii str. Neff	14915447
ACA1_130510	CDS	ACA1_130510	NW_004457373.1	91726	93096	D	encoded by transcript ACA1_130510A; uncharacterized protein	join(91726..91966,92040..92096,92208..92390,92557..92641,92814..93096)	Acanthamoeba castellanii str. Neff	14915448
ACA1_130520	CDS	ACA1_130520	NW_004457373.1	93702	101244	R	encoded by transcript ACA1_130520A; CPSF A subunit region protein	complement(join(93702..93851,93973..94139,94231..94390,94480..94612,94734..94870,94974..95130,95350..95369,95472..95552,95660..95923,96029..96103,96247..96458,96546..96653,96728..96833,96955..97098,97173..97487,97593..97750,97888..98032,98109..98258,98350..98427,98579..98868,98954..99071,99157..99241,99392..99768,99840..99917,100011..100136,100292..100441,100533..100613,100707..100886,101056..101244))	Acanthamoeba castellanii str. Neff	14915449
ACA1_130530	CDS	ACA1_130530	NW_004457373.1	101391	103299	R	encoded by transcript ACA1_130530A; uncharacterized protein	complement(join(101391..101527,101600..101757,101870..102035,102142..102291,102406..103194,103275..103299))	Acanthamoeba castellanii str. Neff	14915450
ACA1_130540	CDS	ACA1_130540	NW_004457373.1	103997	105037	R	encoded by transcript ACA1_130540A; WH2 motif domain containing protein	complement(103997..105037)	Acanthamoeba castellanii str. Neff	14915451
ACA1_130550	CDS	ACA1_130550	NW_004457373.1	105455	107831	R	encoded by transcript ACA1_130550A; WH2 motif domain containing protein	complement(join(105455..105593,105688..105794,105863..105928,106043..106137,106230..106451,106528..106714,106822..107021,107116..107203,107346..107507,107572..107628,107691..107831))	Acanthamoeba castellanii str. Neff	14915452
ACA1_130560	CDS	ACA1_130560	NW_004457373.1	108031	109639	D	encoded by transcript ACA1_130560A; glucosyl hydrolase family protein	join(108031..108117,108178..108248,108340..108441,108511..108654,108760..109030,109180..109384,109476..109639)	Acanthamoeba castellanii str. Neff	14915453
ACA1_130570	CDS	ACA1_130570	NW_004457373.1	109767	112763	R	encoded by transcript ACA1_130570A; F-box domain containing protein	complement(join(109767..109906,109979..111140,111222..111383,111483..111701,111810..112014,112122..112311,112405..112517,112600..112763))	Acanthamoeba castellanii str. Neff	14915454
ACA1_130580	CDS	ACA1_130580	NW_004457373.1	113289	116740	R	encoded by transcript ACA1_130580A; zinc finger, c2h2 type domain containing protein	complement(join(113289..113359,113377..113484,113644..114058,114156..114339,114421..114581,114695..114753,114787..114934,115007..115264,115336..115749,115837..116469,116570..116740))	Acanthamoeba castellanii str. Neff	14915455
ACA1_130590	CDS	ACA1_130590	NW_004457373.1	117014	119018	R	encoded by transcript ACA1_130590A; fumarate hydratase, class II, putative	complement(join(117014..117305,117375..117793,117898..118341,118549..118708,118834..119018))	Acanthamoeba castellanii str. Neff	14915456
ACA1_130600	CDS	ACA1_130600	NW_004457373.1	119429	121117	R	encoded by transcript ACA1_130600A; uncharacterized protein	complement(join(119429..119633,119730..119851,119925..120010,120080..120153,120238..120315,120380..120479,120542..120629,120684..120732,120835..121004,121097..121117))	Acanthamoeba castellanii str. Neff	14915457
ACA1_130610	CDS	ACA1_130610	NW_004457373.1	121452	122283	D	encoded by transcript ACA1_130610A; Hypothetical protein	join(121452..121503,121581..121657,121747..121912,121971..122038,122137..122283)	Acanthamoeba castellanii str. Neff	14915458
ACA1_130620	CDS	ACA1_130620	NW_004457373.1	122734	125012	R	encoded by transcript ACA1_130620A; RhoGAP domain containing protein	complement(join(122734..122794,122889..122962,123074..123251,123326..123503,123661..123820,123919..124461,124544..124661,124816..125012))	Acanthamoeba castellanii str. Neff	14915459
ACA1_130730	CDS	ACA1_130730	NW_004457373.1	126087	127078	D	encoded by transcript ACA1_130730A; metaldependent hydrolase	join(126087..126180,126378..126596,126669..126745,126833..127078)	Acanthamoeba castellanii str. Neff	14915460
ACA1_130840	CDS	ACA1_130840	NW_004457373.1	129047	131557	D	encoded by transcript ACA1_130840A; glycerol-3-phosphate dehydrogenase protein, putative	join(129047..129138,129473..129544,129647..129749,129838..129934,130178..130213,130372..130484,130550..130641,130784..130891,130968..131049,131160..131220,131354..131403,131522..131557)	Acanthamoeba castellanii str. Neff	14915461
ACA1_130850	CDS	ACA1_130850	NW_004457373.1	131851	136432	D	encoded by transcript ACA1_130850A; AMPbinding enzyme domain containing protein	join(131851..132059,132144..132196,132359..132459,132602..132741,132849..132993,133097..133155,133248..133315,133816..133883,133984..134172,134318..134382,134471..134550,134698..134839,134915..135033,135116..135236,135334..135462,135623..135998,136104..136154,136232..136432)	Acanthamoeba castellanii str. Neff	14915462
ACA1_130960	CDS	ACA1_130960	NW_004457373.1	136649	137523	R	encoded by transcript ACA1_130960A; uncharacterized protein	complement(join(136649..137057,137153..137523))	Acanthamoeba castellanii str. Neff	14915463
ACA1_130970	CDS	ACA1_130970	NW_004457373.1	138275	144373	D	encoded by transcript ACA1_130970A; THO2 protein	join(138275..138331,138463..138704,138792..138873,138958..139437,139507..139716,139788..140171,140238..140471,140540..140645,140725..140837,140908..141025,141106..141290,141411..141641,141770..142003,142090..142250,142313..142457,142524..142694,142845..143359,143435..144245,144287..144373)	Acanthamoeba castellanii str. Neff	14915464
ACA1_130980	CDS	ACA1_130980	NW_004457373.1	144650	145476	D	encoded by transcript ACA1_130980A; uncharacterized protein	join(144650..144830,145172..145476)	Acanthamoeba castellanii str. Neff	14915465
ACA1_130990	CDS	ACA1_130990	NW_004457373.1	145608	146604	R	encoded by transcript ACA1_130990A; uncharacterized protein	complement(join(145608..146267,146359..146604))	Acanthamoeba castellanii str. Neff	14915466
ACA1_131000	CDS	ACA1_131000	NW_004457373.1	146786	147831	R	encoded by transcript ACA1_131000A; hydrolase, NUDIX family	complement(join(146786..146870,146953..147056,147212..147342,147417..147497,147589..147661,147727..147831))	Acanthamoeba castellanii str. Neff	14915467
ACA1_131010	CDS	ACA1_131010	NW_004457373.1	148031	149442	R	encoded by transcript ACA1_131010A; uncharacterized protein	complement(join(148031..148131,148208..148348,148419..148595,148697..148869,148973..149442))	Acanthamoeba castellanii str. Neff	14915468
ACA1_131020	CDS	ACA1_131020	NW_004457373.1	150175	151719	D	encoded by transcript ACA1_131020A; Sel1 domain containing protein	150175..151719	Acanthamoeba castellanii str. Neff	14915469
ACA1_131030	CDS	ACA1_131030	NW_004457373.1	151808	154752	R	encoded by transcript ACA1_131030A; protein kinase domain containing protein	complement(join(151808..151967,152056..152141,152235..152320,152445..152484,152553..152621,152710..152748,152846..153058,153176..153253,153372..153416,153508..153611,153715..153796,153929..153991,154109..154225,154675..154752))	Acanthamoeba castellanii str. Neff	14915470
ACA1_131040	CDS	ACA1_131040	NW_004457373.1	155803	158528	D	encoded by transcript ACA1_131040A; ATPase, AAA domain containing protein	join(155803..155918,156027..156217,156311..156635,156708..156724,156836..157090,157172..157267,157351..157466,157562..157665,157742..157845,157923..158165,158296..158370,158452..158528)	Acanthamoeba castellanii str. Neff	14915471
ACA1_131050	CDS	ACA1_131050	NW_004457373.1	158678	161374	D	encoded by transcript ACA1_131050A; K+ channel tetramerization subfamily protein	join(158678..158885,159004..159488,159565..159683,159751..159962,160056..160228,160370..160445,160547..160603,160764..160822,161023..161184,161318..161374)	Acanthamoeba castellanii str. Neff	14915472
ACA1_389830	CDS	ACA1_389830	NW_004457372.1	32	1503	D	encoded by transcript ACA1_389830A; uncharacterized protein	join(<32..174,297..443,544..725,813..>1503)	Acanthamoeba castellanii str. Neff	14915362
ACA1_389940	CDS	ACA1_389940	NW_004457372.1	4742	7105	D	encoded by transcript ACA1_389940A; aminotransferase, class I/II superfamily protein	join(4742..4760,4790..4888,4971..5096,5200..5294,5363..5418,5531..5637,5727..5845,5950..6016,6090..6185,6431..6494,6532..6713,6816..7105)	Acanthamoeba castellanii str. Neff	14915391
ACA1_389950	CDS	ACA1_389950	NW_004457372.1	7174	8703	R	encoded by transcript ACA1_389950A; syntaxin 6, putative	complement(join(7174..7288,7338..7457,7598..7704,7866..7976,8078..8224,8412..8532,8678..>8703))	Acanthamoeba castellanii str. Neff	14915411
ACA1_390060	CDS	ACA1_390060	NW_004457372.1	12756	16766	D	encoded by transcript ACA1_390060A; Carbamoylphosphate synthase L chain, ATP binding domain containing protein	join(12756..12898,13003..13091,13165..13260,13337..13630,13714..13849,13959..14110,14195..14265,14367..14521,14589..14724,14797..15181,15279..15385,15446..15466,15901..16114,16220..16308,16382..16477,16575..16766)	Acanthamoeba castellanii str. Neff	14915412
ACA1_390170	CDS	ACA1_390170	NW_004457372.1	21807	29153	D	encoded by transcript ACA1_390170A; laminin egflike (domains iii and v) domain containing protein	join(<21807..21996,22070..22218,22299..22565,22645..22857,22932..23192,23291..23468,23555..23731,23833..24286,24301..24552,24671..24838,24908..24974,25053..25194,25266..25490,25568..25730,25846..25973,26063..26395,26481..26769,26845..27239,27316..27451,27541..27666,28008..28096,28166..28641,28722..29013,29110..29153)	Acanthamoeba castellanii str. Neff	14915363
ACA1_390280	CDS	ACA1_390280	NW_004457372.1	29474	30085	R	encoded by transcript ACA1_390280A; uncharacterized protein	complement(join(29474..29611,29710..29841,29948..30085))	Acanthamoeba castellanii str. Neff	14915364
ACA1_390290	CDS	ACA1_390290	NW_004457372.1	30297	30655	D	encoded by transcript ACA1_390290A; uncharacterized protein	join(30297..30490,30574..30655)	Acanthamoeba castellanii str. Neff	14915404
ACA1_390400	CDS	ACA1_390400	NW_004457372.1	33456	34334	D	encoded by transcript ACA1_390400A; polynucleotide adenyltransferase	join(33456..33603,33672..33811,33964..34089,34233..34334)	Acanthamoeba castellanii str. Neff	14915405
ACA1_390410	CDS	ACA1_390410	NW_004457372.1	34469	36681	R	encoded by transcript ACA1_390410A; ankyrin repeat-containing protein	complement(join(34469..34780,34876..35040,35262..35350,35453..35551,35750..36138,36244..36401,36559..36681))	Acanthamoeba castellanii str. Neff	14915406
ACA1_390420	CDS	ACA1_390420	NW_004457372.1	36943	38969	D	encoded by transcript ACA1_390420A; Endonuclease/exonuclease/phosphatase family protein	join(36943..37090,37233..37372,37525..37650,37755..38006,38078..38152,38275..38367,38456..38650,38775..38969)	Acanthamoeba castellanii str. Neff	14915407
ACA1_390430	CDS	ACA1_390430	NW_004457372.1	39285	42265	D	encoded by transcript ACA1_390430A; CDK5 regulatory subunit associated protein 1, putative	join(39285..39480,39626..39741,39871..39975,40111..40346,40495..40627,40714..40802,40906..41038,41164..41317,41460..41550,41612..41677,41793..41916,42011..42265)	Acanthamoeba castellanii str. Neff	14915408
ACA1_390440	CDS	ACA1_390440	NW_004457372.1	42415	43338	R	encoded by transcript ACA1_390440A; uncharacterized protein	complement(join(42415..42656,42742..43033,43117..43338))	Acanthamoeba castellanii str. Neff	14915409
ACA1_390450	CDS	ACA1_390450	NW_004457372.1	43906	46094	D	encoded by transcript ACA1_390450A; DEAD/DEAH box helicase domain containing protein	join(43906..45217,45244..46094)	Acanthamoeba castellanii str. Neff	14915410
ACA1_390460	CDS	ACA1_390460	NW_004457372.1	46195	47900	R	encoded by transcript ACA1_390460A; hydrolase, alpha/beta fold domain containing protein	complement(join(46195..46349,46363..46401,46441..46489,46602..46692,46769..46849,47013..47167,47359..47646,47736..47900))	Acanthamoeba castellanii str. Neff	14915392
ACA1_390470	CDS	ACA1_390470	NW_004457372.1	48016	50488	D	encoded by transcript ACA1_390470A; initiator tRNA phosphoribosyl transferase	join(48016..48293,48380..48467,48588..48675,48953..49070,49150..49247,49365..49705,49784..49891,49974..50133,50215..50342,50441..50488)	Acanthamoeba castellanii str. Neff	14915393
ACA1_390480	CDS	ACA1_390480	NW_004457372.1	51993	52832	D	encoded by transcript ACA1_390480A; uncharacterized protein	51993..52832	Acanthamoeba castellanii str. Neff	14915394
ACA1_390500	CDS	ACA1_390500	NW_004457372.1	53837	54822	D	encoded by transcript ACA1_390500A; Ubiquitinconjugating enzyme subfamily protein	join(53837..53882,53988..54188,54264..54442,54529..54822)	Acanthamoeba castellanii str. Neff	14915396
ACA1_390510	CDS	ACA1_390510	NW_004457372.1	54971	55294	R	encoded by transcript ACA1_390510A; uncharacterized protein	complement(54971..55294)	Acanthamoeba castellanii str. Neff	14915397
ACA1_390520	CDS	ACA1_390520	NW_004457372.1	55417	56992	D	encoded by transcript ACA1_390520A; enoylCoA hydratase/isomerase family domain containing protein	join(55417..55681,55750..55796,55811..55901,55967..56097,56190..56249,56360..56535,56642..56707,56866..56890,56954..56992)	Acanthamoeba castellanii str. Neff	14915398
ACA1_390530	CDS	ACA1_390530	NW_004457372.1	57272	64232	D	encoded by transcript ACA1_390530A; GTPaseactivator protein for Ras-like GTPase	join(57272..58238,58328..58406,58515..58924,59049..59446,59633..59742,59829..60320,60439..60891,60987..61083,61164..61347,61459..61732,61880..62025,62111..62277,62354..62512,62608..62760,62859..63033,63151..64232)	Acanthamoeba castellanii str. Neff	14915399
ACA1_390540	CDS	ACA1_390540	NW_004457372.1	64522	66838	D	encoded by transcript ACA1_390540A; phosphoesterase family protein	join(64522..65007,65095..65225,65415..65784,65853..66173,66266..66373,66446..66838)	Acanthamoeba castellanii str. Neff	14915400
ACA1_390550	CDS	ACA1_390550	NW_004457372.1	66883	68465	R	encoded by transcript ACA1_390550A; hydrolase, alpha/beta fold domain containing protein	complement(join(66883..67046,67136..67275,67346..67404,67516..67684,67860..68158,68289..68465))	Acanthamoeba castellanii str. Neff	14915401
ACA1_390570	CDS	ACA1_390570	NW_004457372.1	72733	75456	R	encoded by transcript ACA1_390570A; acetyl/propionyl CoA carboxylase, beta subunit, putative	complement(join(72733..72830,72968..73124,73240..73337,73428..73527,73628..73749,73825..74001,74135..74313,74400..74520,74584..74710,74832..74970,75039..75165,75300..75456))	Acanthamoeba castellanii str. Neff	14915403
ACA1_390580	CDS	ACA1_390580	NW_004457372.1	76536	77510	D	encoded by transcript ACA1_390580A; dual specificity phosphatase, catalytic domain containing protein	join(76536..76581,76679..76812,76997..77110,77325..77510)	Acanthamoeba castellanii str. Neff	14915365
ACA1_390590	CDS	ACA1_390590	NW_004457372.1	77721	78365	R	encoded by transcript ACA1_390590A; Hsp20/alpha crystallin superfamily protein	complement(77721..78365)	Acanthamoeba castellanii str. Neff	14915366
ACA1_390600	CDS	ACA1_390600	NW_004457372.1	79224	80458	R	encoded by transcript ACA1_390600A; metallophosphoesterase domain containing 2, putative	complement(join(79224..79341,79610..79750,79864..79999,80083..80184,80278..80458))	Acanthamoeba castellanii str. Neff	14915367
ACA1_390610	CDS	ACA1_390610	NW_004457372.1	80687	81221	D	encoded by transcript ACA1_390610A; splicing factor 3b subunit 5, putative	join(80687..80733,80878..81001,81171..81221)	Acanthamoeba castellanii str. Neff	14915368
ACA1_390630	CDS	ACA1_390630	NW_004457372.1	82938	85364	D	encoded by transcript ACA1_390630A; uncharacterized protein	join(82938..82958,83202..83821,83936..84026,84104..84310,84432..84527,84653..84786,84916..85106,85306..>85364)	Acanthamoeba castellanii str. Neff	14915370
ACA1_390640	CDS	ACA1_390640	NW_004457372.1	85504	86583	D	encoded by transcript ACA1_390640A; RhoGAP domain containing protein	join(85504..85650,85781..85979,86065..86249,86332..86583)	Acanthamoeba castellanii str. Neff	14915371
ACA1_390750	CDS	ACA1_390750	NW_004457372.1	87142	87760	R	encoded by transcript ACA1_390750A; uncharacterized protein	complement(join(87142..87560,87634..87760))	Acanthamoeba castellanii str. Neff	14915372
ACA1_390760	CDS	ACA1_390760	NW_004457372.1	87961	89255	R	encoded by transcript ACA1_390760A; SCPlike extracellular subfamily protein	complement(join(87961..88241,88321..88824,88906..88980,89063..89255))	Acanthamoeba castellanii str. Neff	14915373
ACA1_390770	CDS	ACA1_390770	NW_004457372.1	90028	91106	R	encoded by transcript ACA1_390770A; dephosphoCoA kinase	complement(join(90028..90065,90239..90337,90424..90555,90657..90705,90771..91106))	Acanthamoeba castellanii str. Neff	14915374
ACA1_390780	CDS	ACA1_390780	NW_004457372.1	91167	92633	D	encoded by transcript ACA1_390780A; mRNA cap guanineN7 methyltransferase	join(91167..91449,91517..91608,91711..91889,92047..92153,92239..92469,92578..92633)	Acanthamoeba castellanii str. Neff	14915375
ACA1_390790	CDS	ACA1_390790	NW_004457372.1	92749	94267	R	encoded by transcript ACA1_390790A; PKD domain containing protein	complement(join(92749..92894,92971..93036,93141..93310,93464..93570,93733..93786,93873..93970,94183..94267))	Acanthamoeba castellanii str. Neff	14915376
ACA1_390800	CDS	ACA1_390800	NW_004457372.1	95514	97474	D	encoded by transcript ACA1_390800A; glycosyltransferase family 8 protein	join(95514..96032,96282..96525,96604..96719,96792..97028,97112..97209,97291..97474)	Acanthamoeba castellanii str. Neff	14915377
ACA1_390810	CDS	ACA1_390810	NW_004457372.1	98261	106520	D	encoded by transcript ACA1_390810A; serine/threonine protein kinase, putative	join(98261..98351,98411..98557,98841..98948,99081..99139,99286..99322,99422..99549,99687..99830,99918..100041,100114..100179,100304..100434,100527..100582,100679..100786,100879..100958,101067..101243,101369..101535,101599..101659,101768..101974,102079..102226,102281..102467,102563..102635,102737..102890,102983..103088,103190..103465,103575..103776,103864..104620,104723..105308,105378..105546,105680..105985,106134..106221,106307..106520)	Acanthamoeba castellanii str. Neff	14915378
ACA1_390820	CDS	ACA1_390820	NW_004457372.1	107841	109431	D	encoded by transcript ACA1_390820A; uncharacterized protein	join(107841..107855,107954..108113,108209..108357,108468..108585,108661..108788,108994..109075,109178..109431)	Acanthamoeba castellanii str. Neff	14915379
ACA1_390930	CDS	ACA1_390930	NW_004457372.1	109551	112600	R	encoded by transcript ACA1_390930A; peptidase family M3 protein	complement(join(109551..109687,109770..109904,110022..110175,110248..110408,110474..110639,110742..110913,111001..111116,111256..111384,111484..111775,111847..111995,112080..112189,112289..112422,112497..>112600))	Acanthamoeba castellanii str. Neff	14915380
ACA1_390940	CDS	ACA1_390940	NW_004457372.1	113980	117354	D	encoded by transcript ACA1_390940A; fungal Zn(2)-Cys(6) binuclear cluster domain containing protein	join(113980..114360,114528..114969,115056..115934,116066..116499,116569..117354)	Acanthamoeba castellanii str. Neff	14915381
ACA1_390950	CDS	ACA1_390950	NW_004457372.1	117770	119026	D	encoded by transcript ACA1_390950A; uncharacterized protein	join(117770..117838,117983..118778,118860..119026)	Acanthamoeba castellanii str. Neff	14915382
ACA1_390960	CDS	ACA1_390960	NW_004457372.1	119631	121583	R	encoded by transcript ACA1_390960A; uncharacterized protein	complement(join(119631..120978,121141..121241,121497..121583))	Acanthamoeba castellanii str. Neff	14915383
ACA1_391070	CDS	ACA1_391070	NW_004457372.1	122399	123510	R	encoded by transcript ACA1_391070A; uncharacterized protein	complement(join(122399..122495,122537..122644,122728..122822,122922..122991,123074..123137,123197..123295,123486..123510))	Acanthamoeba castellanii str. Neff	14915384
ACA1_391080	CDS	ACA1_391080	NW_004457372.1	123755	124577	D	encoded by transcript ACA1_391080A; uncharacterized protein	join(123755..123866,123941..124017,124234..124300,124366..124577)	Acanthamoeba castellanii str. Neff	14915385
ACA1_391090	CDS	ACA1_391090	NW_004457372.1	124744	127874	R	encoded by transcript ACA1_391090A; inorganic diphosphatase	complement(join(124744..124827,124955..125082,125156..125264,125371..125527,125615..125695,125780..125943,126195..126266,126371..126541,126698..126852,126963..127079,127232..127408,127529..127692,127759..127874))	Acanthamoeba castellanii str. Neff	14915386
ACA1_391100	CDS	ACA1_391100	NW_004457372.1	128362	129056	R	encoded by transcript ACA1_391100A; uncharacterized protein	complement(join(128362..128538,128629..128829,129018..129056))	Acanthamoeba castellanii str. Neff	14915387
ACA1_391120	CDS	ACA1_391120	NW_004457372.1	130779	131822	R	encoded by transcript ACA1_391120A; uncharacterized protein	complement(join(130779..131705,131730..131822))	Acanthamoeba castellanii str. Neff	14915389
ACA1_391130	CDS	ACA1_391130	NW_004457372.1	132140	133183	D	encoded by transcript ACA1_391130A; uncharacterized protein	join(132140..132201,132364..132576,132624..132699,132734..132761,132858..132994,133088..133183)	Acanthamoeba castellanii str. Neff	14915390
ACA1_391140	CDS	ACA1_391140	NW_004457372.1	133208	134829	R	encoded by transcript ACA1_391140A; uncharacterized protein	complement(join(133208..134133,134202..134592,134812..134829))	Acanthamoeba castellanii str. Neff	14915339
ACA1_391150	CDS	ACA1_391150	NW_004457372.1	134930	137458	R	encoded by transcript ACA1_391150A; polysaccharide biosynthesis protein	complement(join(134930..136803,136903..137201,137391..137458))	Acanthamoeba castellanii str. Neff	14915340
ACA1_391160	CDS	ACA1_391160	NW_004457372.1	137601	140285	R	encoded by transcript ACA1_391160A; uncharacterized protein	complement(join(137601..137842,137924..138043,138134..138256,138342..138672,138740..138843,138934..139274,139388..139505,139560..139710,139731..139847,139944..140285))	Acanthamoeba castellanii str. Neff	14915341
ACA1_391170	CDS	ACA1_391170	NW_004457372.1	140678	141523	R	encoded by transcript ACA1_391170A; uncharacterized protein	complement(join(140678..140761,140993..141523))	Acanthamoeba castellanii str. Neff	14915342
ACA1_391180	CDS	ACA1_391180	NW_004457372.1	141865	144915	D	encoded by transcript ACA1_391180A; uncharacterized protein	join(141865..141903,142135..142340,142438..142516,142576..142616,142686..142742,142829..142923,143037..143243,143401..143500,143611..143815,144009..144338,144423..144740,144862..144915)	Acanthamoeba castellanii str. Neff	14915343
ACA1_391190	CDS	ACA1_391190	NW_004457372.1	145356	146628	R	encoded by transcript ACA1_391190A; uncharacterized protein	complement(join(145356..145613,145717..145803,145898..146012,146120..146256,146362..146628))	Acanthamoeba castellanii str. Neff	14915344
ACA1_391200	CDS	ACA1_391200	NW_004457372.1	146722	148243	R	encoded by transcript ACA1_391200A; LmbE family protein	complement(join(146722..146865,146948..147082,147295..147426,147509..147586,147651..147741,147853..148090,148219..148243))	Acanthamoeba castellanii str. Neff	14915345
ACA1_391210	CDS	ACA1_391210	NW_004457372.1	148418	150133	R	encoded by transcript ACA1_391210A; Ras subfamily protein	complement(join(148418..148594,149455..149589,149669..149858,150027..150133))	Acanthamoeba castellanii str. Neff	14915346
ACA1_391320	CDS	ACA1_391320	NW_004457372.1	150328	152931	R	encoded by transcript ACA1_391320A; TBC domain containing protein	complement(join(150328..150738,150895..151036,151228..151361,151453..151619,151780..151894,151981..152052,152121..152255,152370..152440,152523..152671,152803..152865,152876..152931))	Acanthamoeba castellanii str. Neff	14915347
ACA1_391330	CDS	ACA1_391330	NW_004457372.1	153237	154475	R	encoded by transcript ACA1_391330A; uncharacterized protein	complement(join(153237..153748,153822..153902,154146..154247,154355..154475))	Acanthamoeba castellanii str. Neff	14915348
ACA1_391340	CDS	ACA1_391340	NW_004457372.1	154720	156211	D	encoded by transcript ACA1_391340A; protein phosphatase 2C domain containing protein	join(154720..154742,154828..154946,155023..155163,155244..155436,155526..155637,155718..155834,155896..156009,156107..156211)	Acanthamoeba castellanii str. Neff	14915349
ACA1_391350	CDS	ACA1_391350	NW_004457372.1	156184	157397	R	encoded by transcript ACA1_391350A; carrier superfamily protein	complement(join(156184..156225,156422..156507,156654..156692,156753..156811,156895..156955,157073..157156,157277..157397))	Acanthamoeba castellanii str. Neff	14915350
ACA1_391360	CDS	ACA1_391360	NW_004457372.1	158159	159780	D	encoded by transcript ACA1_391360A; alpha amylase, putative	join(158159..158971,159054..159220,159294..159780)	Acanthamoeba castellanii str. Neff	14915351
ACA1_391370	CDS	ACA1_391370	NW_004457372.1	159933	160478	D	encoded by transcript ACA1_391370A; uncharacterized protein	join(159933..160033,160146..160192,160339..160478)	Acanthamoeba castellanii str. Neff	14915352
ACA1_391380	CDS	ACA1_391380	NW_004457372.1	160764	162394	D	encoded by transcript ACA1_391380A; uncharacterized protein	join(160764..160794,160872..162394)	Acanthamoeba castellanii str. Neff	14915323
ACA1_391400	CDS	ACA1_391400	NW_004457372.1	166112	166889	R	encoded by transcript ACA1_391400A; uncharacterized protein	complement(join(166112..166130,166240..166438,166619..166889))	Acanthamoeba castellanii str. Neff	14915325
ACA1_391420	CDS	ACA1_391420	NW_004457372.1	168838	170468	D	encoded by transcript ACA1_391420A; uncharacterized protein	join(168838..168988,169074..169174,169274..169420,169483..169579,169662..169792,169866..169950,170024..170112,170193..170335,170420..170468)	Acanthamoeba castellanii str. Neff	14915327
ACA1_391430	CDS	ACA1_391430	NW_004457372.1	170919	172181	D	encoded by transcript ACA1_391430A; inosineuridine preferring nucleoside hydrolase family protein	join(170919..171661,171767..172181)	Acanthamoeba castellanii str. Neff	14915328
ACA1_391450	CDS	ACA1_391450	NW_004457372.1	173424	176760	R	encoded by transcript ACA1_391450A; DNA replication licensing factor mcm7, putative	complement(join(173424..173543,173637..173744,173833..174022,174155..174425,174501..174963,175035..175116,175203..175317,175405..175537,175611..175748,175830..176007,176102..176276,176347..176497,176557..176760))	Acanthamoeba castellanii str. Neff	14915330
ACA1_391460	CDS	ACA1_391460	NW_004457372.1	177721	181964	D	encoded by transcript ACA1_391460A; Ubiquitin carboxylterminal hydrolase	join(177721..177806,177906..178068,178136..178229,178320..178457,178592..178685,178760..178856,178903..179091,179175..179369,179486..179588,179688..179900,180022..180167,180254..180415,180490..180668,180775..180964,181039..181239,181316..181499,181624..181964)	Acanthamoeba castellanii str. Neff	14915331
ACA1_391470	CDS	ACA1_391470	NW_004457372.1	182465	184009	D	encoded by transcript ACA1_391470A; Hsp20/alpha crystallin superfamily protein	182465..184009	Acanthamoeba castellanii str. Neff	14915332
ACA1_391480	CDS	ACA1_391480	NW_004457372.1	184492	187250	D	encoded by transcript ACA1_391480A; kelch repeat protein	join(184492..184742,184879..184991,185141..185214,185349..185430,185561..185710,185838..185925,186010..186079,186178..186266,186415..186497,186567..186722,186927..187020,187148..187250)	Acanthamoeba castellanii str. Neff	14915333
ACA1_391490	CDS	ACA1_391490	NW_004457372.1	188176	189130	R	encoded by transcript ACA1_391490A; adenylate kinase	complement(join(188176..188373,188531..188698,188828..189130))	Acanthamoeba castellanii str. Neff	14915334
ACA1_391500	CDS	ACA1_391500	NW_004457372.1	189616	190717	R	encoded by transcript ACA1_391500A; angiotonin transactivated protein 1 isoform 2, putative	complement(join(189616..189702,189825..189965,190082..190411,190511..190717))	Acanthamoeba castellanii str. Neff	14915335
ACA1_391510	CDS	ACA1_391510	NW_004457372.1	190770	193287	R	encoded by transcript ACA1_391510A; PPR repeat/pentatricopeptide repeat domain containing protein	complement(join(190770..191393,191475..191537,191608..191811,191896..192096,192210..192404,192473..192676,192759..192913,193026..193139,193215..>193287))	Acanthamoeba castellanii str. Neff	14915336
ACA1_391520	CDS	ACA1_391520	NW_004457372.1	193763	195454	D	encoded by transcript ACA1_391520A; SNF7 family protein	join(193763..193894,194003..194200,194261..194443,194512..194642,194745..194913,194990..195454)	Acanthamoeba castellanii str. Neff	14915337
ACA1_391530	CDS	ACA1_391530	NW_004457372.1	195598	197485	R	encoded by transcript ACA1_391530A; uncharacterized protein	complement(join(195598..196626,196721..197485))	Acanthamoeba castellanii str. Neff	14915338
ACA1_391540	CDS	ACA1_391540	NW_004457372.1	197957	200480	R	encoded by transcript ACA1_391540A; phosphatidylinositol:UDPGlcNAc transferase PIG-A, putative	complement(join(197957..198013,198158..198272,198384..198567,198684..198807,198945..199150,199242..199357,199521..199696,199862..199984,200110..200175,200391..200480))	Acanthamoeba castellanii str. Neff	14915413
ACA1_391550	CDS	ACA1_391550	NW_004457372.1	200733	202941	D	encoded by transcript ACA1_391550A; Ssl1like protein	join(200733..200908,201114..201270,201377..201473,201604..201643,201821..201920,202091..202168,202271..202428,202529..202556,202569..202688,202813..202941)	Acanthamoeba castellanii str. Neff	14915414
ACA1_391560	CDS	ACA1_391560	NW_004457372.1	203034	205033	R	encoded by transcript ACA1_391560A; Ras guanine nucleotide exchange factor, putative	complement(join(203034..203283,203372..203550,203671..203886,203983..204144,204268..204475,204571..204732,204858..205033))	Acanthamoeba castellanii str. Neff	14915415
ACA1_391570	CDS	ACA1_391570	NW_004457372.1	205081	208406	R	encoded by transcript ACA1_391570A; uncharacterized protein	complement(join(205081..205415,205585..205770,205885..206035,206161..206306,206443..206505,206644..206794,206913..207597,207653..207869,207966..208010,208097..>208406))	Acanthamoeba castellanii str. Neff	14915416
ACA1_391580	CDS	ACA1_391580	NW_004457372.1	208611	211275	R	encoded by transcript ACA1_391580A; CobW/P47K Cterminal domain containing protein	complement(join(208611..208910,209004..209494,209578..209637,209834..210034,210174..210480,210605..210787,211162..211275))	Acanthamoeba castellanii str. Neff	14915417
ACA1_391590	CDS	ACA1_391590	NW_004457372.1	211962	212420	D	encoded by transcript ACA1_391590A; uncharacterized protein	join(211962..212100,212206..212292,212320..212420)	Acanthamoeba castellanii str. Neff	14915418
ACA1_391600	CDS	ACA1_391600	NW_004457372.1	212831	220235	R	encoded by transcript ACA1_391600A; uncharacterized protein	complement(join(212831..213190,213298..213436,213626..213782,213884..214057,214134..214182,214266..214367,214435..214514,214627..214835,214951..215272,215413..215545,215677..216028,216115..216239,216379..216557,216661..216803,216933..217048,217135..217232,217346..217460,217572..217751,217882..218049,218132..218246,218361..218458,218548..218640,218725..218819,218911..218991,219059..219153,219234..219454,219567..219860,219986..220022,220060..220133,220218..220235))	Acanthamoeba castellanii str. Neff	14915419
ACA1_391610	CDS	ACA1_391610	NW_004457372.1	220432	223523	D	encoded by transcript ACA1_391610A; HEAT repeat domain containing protein	join(220432..220596,220730..220990,221100..221316,221502..221804,221910..222017,222095..222406,222530..222657,222677..222700,222809..222940,223066..223290,223413..223523)	Acanthamoeba castellanii str. Neff	14915420
ACA1_391630	CDS	ACA1_391630	NW_004457372.1	229174	230961	D	encoded by transcript ACA1_391630A; uncharacterized protein	join(229174..229397,229493..229844,229926..230081,230182..230385,230508..230568,230651..230758,230822..230961)	Acanthamoeba castellanii str. Neff	14915422
ACA1_391640	CDS	ACA1_391640	NW_004457372.1	231049	233066	R	encoded by transcript ACA1_391640A; carrier superfamily protein	complement(join(231049..231183,231264..231393,231590..231714,231843..231920,232050..232135,232269..232307,232381..232439,232527..232587,232733..232816,232946..233066))	Acanthamoeba castellanii str. Neff	14915423
ACA1_391650	CDS	ACA1_391650	NW_004457372.1	233656	234341	R	encoded by transcript ACA1_391650A; catalytic, putative	complement(join(233656..233824,233997..234148,234210..234341))	Acanthamoeba castellanii str. Neff	14915424
ACA1_391660	CDS	ACA1_391660	NW_004457372.1	234404	240252	D	encoded by transcript ACA1_391660A; Putative GTPase activating protein for Arf	join(234404..234488,234562..234677,234784..235429,235595..235800,236458..236592,236688..236847,236965..237086,237186..237276,237368..237462,237585..238203,238308..238507,238648..238794,238899..238982,239104..239230,239371..239504,239587..239678,239790..240122,240225..240252)	Acanthamoeba castellanii str. Neff	14915425
ACA1_391670	CDS	ACA1_391670	NW_004457372.1	240496	241045	R	encoded by transcript ACA1_391670A; Ankyrin repeatcontaining protein	complement(join(240496..240503,240590..240773,240857..241045))	Acanthamoeba castellanii str. Neff	14915309
ACA1_391680	CDS	ACA1_391680	NW_004457372.1	241255	244001	R	encoded by transcript ACA1_391680A; squalene and phytoene synthases superfamily protein	complement(join(241255..241458,241540..241738,241838..242427,242526..242626,242741..243151,243299..243594,243856..244001))	Acanthamoeba castellanii str. Neff	14915310
ACA1_391690	CDS	ACA1_391690	NW_004457372.1	244560	246768	D	encoded by transcript ACA1_391690A; phytoene dehydrogenase	join(244560..245110,245223..245352,245426..245492,245595..245704,245837..246133,246148..246768)	Acanthamoeba castellanii str. Neff	14915311
ACA1_391700	CDS	ACA1_391700	NW_004457372.1	246890	247360	R	encoded by transcript ACA1_391700A; uncharacterized protein	complement(246890..247360)	Acanthamoeba castellanii str. Neff	14915312
ACA1_391810	CDS	ACA1_391810	NW_004457372.1	248621	253418	R	encoded by transcript ACA1_391810A; carrier superfamily protein	complement(join(248621..248628,248962..249136,249214..249297,249323..251266,251322..251337,251358..252613,252753..252775,252927..253103,253223..253347,253414..253418))	Acanthamoeba castellanii str. Neff	14915313
ACA1_392020	CDS	ACA1_392020	NW_004457372.1	253651	254545	R	encoded by transcript ACA1_392020A; uncharacterized protein	complement(join(253651..253827,253916..254106,254395..254545))	Acanthamoeba castellanii str. Neff	14915314
ACA1_392130	CDS	ACA1_392130	NW_004457372.1	254832	257919	R	encoded by transcript ACA1_392130A; uncharacterized protein	complement(join(254832..255254,255333..255586,255686..256718,256839..256962,257121..257499,257802..257919))	Acanthamoeba castellanii str. Neff	14915315
ACA1_392140	CDS	ACA1_392140	NW_004457372.1	259278	260405	D	encoded by transcript ACA1_392140A; GATA zinc finger domain containing protein	join(259278..259478,259588..260036,260120..260405)	Acanthamoeba castellanii str. Neff	14915316
ACA1_392150	CDS	ACA1_392150	NW_004457372.1	260549	263160	R	encoded by transcript ACA1_392150A; ATPase, AAA domain containing protein	complement(join(260549..260833,261065..261234,261336..261446,261539..261633,261719..261764,261846..261947,262027..262073,262139..262292,262427..262546,262656..262748,262808..262950,263051..263160))	Acanthamoeba castellanii str. Neff	14915317
ACA1_392160	CDS	ACA1_392160	NW_004457372.1	263745	264974	R	encoded by transcript ACA1_392160A; carrier superfamily protein	complement(join(263745..263973,264136..264419,264486..264588,264645..264727,264855..264974))	Acanthamoeba castellanii str. Neff	14915318
ACA1_392270	CDS	ACA1_392270	NW_004457372.1	265815	267153	R	encoded by transcript ACA1_392270A; carrier superfamily protein	complement(join(265815..265886,266130..266259,266335..266409,266487..266569,266637..266972,267046..267153))	Acanthamoeba castellanii str. Neff	14915319
ACA1_392380	CDS	ACA1_392380	NW_004457372.1	267379	267711	D	encoded by transcript ACA1_392380A; histone H4, putative	267379..267711	Acanthamoeba castellanii str. Neff	14915320
ACA1_392390	CDS	ACA1_392390	NW_004457372.1	268365	270766	D	encoded by transcript ACA1_392390A; Rfwd1prov protein	join(268365..268447,268615..269099,269225..269368,269475..269605,269703..269822,269931..270066,270077..270120,270162..270305,270395..270766)	Acanthamoeba castellanii str. Neff	14915321
ACA1_392520	CDS	ACA1_392520	NW_004457372.1	283757	285662	R	encoded by transcript ACA1_392520A; uncharacterized protein	complement(join(283757..284038,284134..284175,284261..284330,284449..284540,284637..284840,284943..285662))	Acanthamoeba castellanii str. Neff	14915354
ACA1_392530	CDS	ACA1_392530	NW_004457372.1	285866	288811	D	encoded by transcript ACA1_392530A; cysteine-tRNA ligase	join(285866..285950,286110..286248,286377..287517,287588..287728,287812..288376,288489..288811)	Acanthamoeba castellanii str. Neff	14915355
ACA1_392540	CDS	ACA1_392540	NW_004457372.1	288987	289703	R	encoded by transcript ACA1_392540A; uncharacterized protein	complement(288987..289703)	Acanthamoeba castellanii str. Neff	14915356
ACA1_392550	CDS	ACA1_392550	NW_004457372.1	290121	294243	D	encoded by transcript ACA1_392550A; helicase conserved Cterminal domain containing protein	join(290121..290157,290268..290519,290670..290725,290759..291071,291178..291497,291576..291776,291949..292133,292242..292395,292501..292718,292845..292908,293006..293086,293309..293443,293596..293836,293927..294243)	Acanthamoeba castellanii str. Neff	14915357
ACA1_392560	CDS	ACA1_392560	NW_004457372.1	294405	296880	R	encoded by transcript ACA1_392560A; uncharacterized protein	complement(join(294405..294551,294628..294734,294849..295007,295102..295177,295298..295699,295841..295915,296039..296284,296422..296587,296690..296788,296864..296880))	Acanthamoeba castellanii str. Neff	14915358
ACA1_392570	CDS	ACA1_392570	NW_004457372.1	296906	297532	R	encoded by transcript ACA1_392570A; uncharacterized protein	complement(join(296906..296957,297046..297087,297207..297232,297304..297370,297453..297532))	Acanthamoeba castellanii str. Neff	14915359
ACA1_392580	CDS	ACA1_392580	NW_004457372.1	297827	298901	D	encoded by transcript ACA1_392580A; transmembrane and coiledcoil domains 1, putative	join(297827..297887,297983..298060,298160..298362,298492..298585,298678..298901)	Acanthamoeba castellanii str. Neff	14915360
ACA1_392590	CDS	ACA1_392590	NW_004457372.1	299448	300158	R	encoded by transcript ACA1_392590A; uncharacterized protein	complement(299448..300158)	Acanthamoeba castellanii str. Neff	14915361
ACA1_337440	CDS	ACA1_337440	NW_004457371.1	1204	1718	R	encoded by transcript ACA1_337440A; uncharacterized protein	complement(join(1204..1214,1259..1718))	Acanthamoeba castellanii str. Neff	14915303
ACA1_337550	CDS	ACA1_337550	NW_004457371.1	4822	5076	D	encoded by transcript ACA1_337550A; uncharacterized protein	join(4822..4903,4955..5076)	Acanthamoeba castellanii str. Neff	14915304
ACA1_337560	CDS	ACA1_337560	NW_004457371.1	6353	8708	R	encoded by transcript ACA1_337560A; uncharacterized protein	complement(join(6353..6361,6379..8057,8184..8508,8637..8708))	Acanthamoeba castellanii str. Neff	14915305
ACA1_337580	CDS	ACA1_337580	NW_004457371.1	12085	12297	D	encoded by transcript ACA1_337580A; uncharacterized protein	12085..12297	Acanthamoeba castellanii str. Neff	14915307
ACA1_337590	CDS	ACA1_337590	NW_004457371.1	12465	13424	R	encoded by transcript ACA1_337590A; uncharacterized protein	complement(12465..13424)	Acanthamoeba castellanii str. Neff	14915308
ACA1_337600	CDS	ACA1_337600	NW_004457371.1	14882	15325	D	encoded by transcript ACA1_337600A; uncharacterized protein	14882..15325	Acanthamoeba castellanii str. Neff	14915298
ACA1_337610	CDS	ACA1_337610	NW_004457371.1	16133	16886	D	encoded by transcript ACA1_337610A; uncharacterized protein	join(16133..16458,16487..16633,16724..16780,16856..16886)	Acanthamoeba castellanii str. Neff	14915299
ACA1_337620	CDS	ACA1_337620	NW_004457371.1	17191	18433	R	encoded by transcript ACA1_337620A; major capsid protein	complement(join(17191..17202,17276..17283,17364..17451,17519..18433))	Acanthamoeba castellanii str. Neff	14915300
ACA1_337630	CDS	ACA1_337630	NW_004457371.1	18673	19284	D	encoded by transcript ACA1_337630A; uncharacterized protein	join(18673..18918,18964..19284)	Acanthamoeba castellanii str. Neff	14915301
ACA1_337640	CDS	ACA1_337640	NW_004457371.1	20186	20844	R	encoded by transcript ACA1_337640A; uncharacterized protein	complement(join(20186..20257,20378..20502,20823..20844))	Acanthamoeba castellanii str. Neff	14915302
ACA1_022180	CDS	ACA1_022180	NW_004457370.1	228	816	D	encoded by transcript ACA1_022180A; uncharacterized protein	join(228..726,791..816)	Acanthamoeba castellanii str. Neff	14915289
ACA1_022190	CDS	ACA1_022190	NW_004457370.1	957	1266	R	encoded by transcript ACA1_022190A; uncharacterized protein	complement(join(957..1135,1197..1266))	Acanthamoeba castellanii str. Neff	14915290
ACA1_022200	CDS	ACA1_022200	NW_004457370.1	2107	2538	D	encoded by transcript ACA1_022200A; uncharacterized protein	join(2107..2379,2512..2538)	Acanthamoeba castellanii str. Neff	14915297
ACA1_022210	CDS	ACA1_022210	NW_004457370.1	2722	3375	D	encoded by transcript ACA1_022210A; uncharacterized protein	join(2722..3261,3307..3375)	Acanthamoeba castellanii str. Neff	14915291
ACA1_022220	CDS	ACA1_022220	NW_004457370.1	4291	6778	R	encoded by transcript ACA1_022220A; AcetylCoA carboxylase, carboxyltransferase component, putative	complement(join(4291..4707,4803..4964,5065..5227,5477..5573,5675..5782,5884..6058,6145..6255,6494..6778))	Acanthamoeba castellanii str. Neff	14915292
ACA1_022330	CDS	ACA1_022330	NW_004457370.1	7425	10997	D	encoded by transcript ACA1_022330A; carbamoylphosphate synthase L chain, ATP-binding, putative	join(7425..7475,7562..7714,7831..7918,8040..8196,8286..8329,8442..8514,8604..8675,8789..8864,8938..9156,9253..9476,9583..9721,9811..10046,10138..10365,10480..10708,10830..10997)	Acanthamoeba castellanii str. Neff	14915293
ACA1_022340	CDS	ACA1_022340	NW_004457370.1	11102	11662	R	encoded by transcript ACA1_022340A; uncharacterized protein	complement(join(11102..11267,11369..11504,11575..11662))	Acanthamoeba castellanii str. Neff	14915294
ACA1_022350	CDS	ACA1_022350	NW_004457370.1	12066	12564	R	encoded by transcript ACA1_022350A; uncharacterized protein	complement(join(12066..12430,12495..12564))	Acanthamoeba castellanii str. Neff	14915295
ACA1_022360	CDS	ACA1_022360	NW_004457370.1	12848	18985	R	encoded by transcript ACA1_022360A; uncharacterized protein	complement(join(12848..13009,13071..13361,13509..13595,13692..13929,14001..14171,14291..14394,14483..14730,14810..15002,15079..15140,15229..15463,15587..15661,15738..15983,16072..16235,16400..16496,16662..16832,18224..18382,18510..18677,18767..>18985))	Acanthamoeba castellanii str. Neff	14915296
ACA1_124690	CDS	ACA1_124690	NW_004457369.1	146	650	D	encoded by transcript ACA1_124690A; guanine nucleotidebinding protein alpha-7 subunit	join(146..192,353..459,574..>650)	Acanthamoeba castellanii str. Neff	14915255
ACA1_124800	CDS	ACA1_124800	NW_004457369.1	6986	8791	D	encoded by transcript ACA1_124800A; Integrase	join(6986..7206,7528..7681,7736..8435,8622..8791)	Acanthamoeba castellanii str. Neff	14915257
ACA1_124810	CDS	ACA1_124810	NW_004457369.1	9349	10283	D	encoded by transcript ACA1_124810A; Transposable element; uncharacterized protein	join(9349..9758,10034..10283)	Acanthamoeba castellanii str. Neff	14915256
ACA1_124920	CDS	ACA1_124920	NW_004457369.1	12537	14576	R	encoded by transcript ACA1_124920A; uncharacterized protein	complement(join(<12537..12752,12829..12892,13002..13711,13733..14423,14547..14576))	Acanthamoeba castellanii str. Neff	14915278
ACA1_124930	CDS	ACA1_124930	NW_004457369.1	14994	17338	R	encoded by transcript ACA1_124930A; SH3 domain containing protein	complement(join(14994..15085,15159..15299,15453..16230,16307..17338))	Acanthamoeba castellanii str. Neff	14915279
ACA1_125040	CDS	ACA1_125040	NW_004457369.1	21604	22226	R	encoded by transcript ACA1_125040A; uncharacterized protein	complement(join(21604..21684,21815..21879,21938..22226))	Acanthamoeba castellanii str. Neff	14915280
ACA1_125050	CDS	ACA1_125050	NW_004457369.1	22469	22669	D	encoded by transcript ACA1_125050A; uncharacterized protein	22469..22669	Acanthamoeba castellanii str. Neff	14915281
ACA1_125060	CDS	ACA1_125060	NW_004457369.1	22960	24046	D	encoded by transcript ACA1_125060A; response regulator receiver domain containing protein	join(22960..23163,23363..23440,23485..23664,23732..24046)	Acanthamoeba castellanii str. Neff	14915282
ACA1_125070	CDS	ACA1_125070	NW_004457369.1	24102	24523	R	encoded by transcript ACA1_125070A; Fbox domain containing protein	complement(join(24102..24161,24244..24357,24419..24523))	Acanthamoeba castellanii str. Neff	14915283
ACA1_125080	CDS	ACA1_125080	NW_004457369.1	25100	27382	D	encoded by transcript ACA1_125080A; uncharacterized protein	join(25100..25686,25756..27382)	Acanthamoeba castellanii str. Neff	14915284
ACA1_125090	CDS	ACA1_125090	NW_004457369.1	28011	29843	D	encoded by transcript ACA1_125090A; uncharacterized protein	28011..29843	Acanthamoeba castellanii str. Neff	14915285
ACA1_125100	CDS	ACA1_125100	NW_004457369.1	30030	31338	R	encoded by transcript ACA1_125100A; uncharacterized protein	complement(join(30030..30240,30323..30393,30480..30624,30691..30812,30929..30993,31062..31212,31291..31338))	Acanthamoeba castellanii str. Neff	14915286
ACA1_125110	CDS	ACA1_125110	NW_004457369.1	31575	32822	R	encoded by transcript ACA1_125110A; cysteine proteinase	complement(join(31575..31662,31714..32113,32282..32822))	Acanthamoeba castellanii str. Neff	14915287
ACA1_125120	CDS	ACA1_125120	NW_004457369.1	33388	34525	R	encoded by transcript ACA1_125120A; uncharacterized protein	complement(join(33388..33563,33646..33696,33775..33870,33970..34525))	Acanthamoeba castellanii str. Neff	14915288
ACA1_125130	CDS	ACA1_125130	NW_004457369.1	34887	36597	D	encoded by transcript ACA1_125130A; oxidoreductase family, NADbinding Rossmann fold domain containing protein	join(34887..35016,35095..35245,35376..35436,35541..35605,35713..35803,35881..36000,36076..36219,36253..36339,36427..36597)	Acanthamoeba castellanii str. Neff	14915258
ACA1_125150	CDS	ACA1_125150	NW_004457369.1	39101	40932	R	encoded by transcript ACA1_125150A; Alphamannosidase	complement(join(39101..39422,39515..39684,39865..39950,40052..40135,40222..40294,40441..40613,40693..40750,40864..40932))	Acanthamoeba castellanii str. Neff	14915260
ACA1_125160	CDS	ACA1_125160	NW_004457369.1	41211	43068	R	encoded by transcript ACA1_125160A; uncharacterized protein	complement(join(41211..41673,41809..42073,42205..42325,42453..42526,42597..42690,42777..42855,42968..43068))	Acanthamoeba castellanii str. Neff	14915261
ACA1_125170	CDS	ACA1_125170	NW_004457369.1	43888	45561	R	encoded by transcript ACA1_125170A; glycosyl hydrolase	complement(join(43888..44109,44193..44334,44447..44538,44639..44756,44856..44943,45176..45391,45474..45561))	Acanthamoeba castellanii str. Neff	14915262
ACA1_125280	CDS	ACA1_125280	NW_004457369.1	47103	47780	D	encoded by transcript ACA1_125280A; LIM domain containing protein	join(47103..47331,47476..47780)	Acanthamoeba castellanii str. Neff	14915263
ACA1_125390	CDS	ACA1_125390	NW_004457369.1	50475	51141	D	encoded by transcript ACA1_125390A; uncharacterized protein	join(<50475..50691,50837..51141)	Acanthamoeba castellanii str. Neff	14915264
ACA1_125410	CDS	ACA1_125410	NW_004457369.1	55500	55946	D	encoded by transcript ACA1_125410A; LYR motifcontaining protein 7, putative	join(55500..55632,55693..55803,55876..55946)	Acanthamoeba castellanii str. Neff	14915266
ACA1_125420	CDS	ACA1_125420	NW_004457369.1	56215	57160	R	encoded by transcript ACA1_125420A; uncharacterized protein	complement(join(56215..56598,56622..56832,56919..57160))	Acanthamoeba castellanii str. Neff	14915267
ACA1_125530	CDS	ACA1_125530	NW_004457369.1	57675	58074	R	encoded by transcript ACA1_125530A; uncharacterized protein	complement(join(57675..57791,57943..58074))	Acanthamoeba castellanii str. Neff	14915268
ACA1_125540	CDS	ACA1_125540	NW_004457369.1	58487	60957	D	encoded by transcript ACA1_125540A; asparagine-tRNA ligase	join(58487..58549,58612..58721,58858..58957,59108..59192,59274..59399,59643..59796,59903..60086,60162..60275,60342..60419,60509..60554,60639..60750,60831..60957)	Acanthamoeba castellanii str. Neff	14915269
ACA1_125550	CDS	ACA1_125550	NW_004457369.1	61064	66586	R	encoded by transcript ACA1_125550A; DNAdirected RNA polymerase, beta subunit	complement(join(61064..61246,61612..61728,61856..62084,62167..62577,62651..63222,63316..63551,63637..63757,63835..63908,64034..64169,64257..64366,64451..64668,64766..64898,65005..65078,65206..65285,65394..65505,65600..65667,65777..65917,65999..66115,66299..66586))	Acanthamoeba castellanii str. Neff	14915270
ACA1_125560	CDS	ACA1_125560	NW_004457369.1	66913	67314	R	encoded by transcript ACA1_125560A; uncharacterized protein	complement(66913..67314)	Acanthamoeba castellanii str. Neff	14915271
ACA1_125570	CDS	ACA1_125570	NW_004457369.1	67440	69001	R	encoded by transcript ACA1_125570A; zinc finger, c2h2 type domain containing protein	complement(join(67440..67585,67815..67890,67976..68122,68167..68368,68505..68725,68846..69001))	Acanthamoeba castellanii str. Neff	14915272
ACA1_125680	CDS	ACA1_125680	NW_004457369.1	70096	70526	R	encoded by transcript ACA1_125680A; uncharacterized protein	complement(join(70096..70171,70237..70386,70456..70526))	Acanthamoeba castellanii str. Neff	14915273
ACA1_125790	CDS	ACA1_125790	NW_004457369.1	73003	73517	R	encoded by transcript ACA1_125790A; nuclear protein E33 isoform a isoform 3, putative	complement(join(73003..73086,73180..73280,73355..73517))	Acanthamoeba castellanii str. Neff	14915274
ACA1_125800	CDS	ACA1_125800	NW_004457369.1	74181	75796	D	encoded by transcript ACA1_125800A; PHprotein kinase domain containing protein	join(74181..74432,74506..74822,74936..75069,75153..75325,75461..75532,75641..75796)	Acanthamoeba castellanii str. Neff	14915275
ACA1_125810	CDS	ACA1_125810	NW_004457369.1	76036	78156	R	encoded by transcript ACA1_125810A; protein kinase	complement(join(76036..76188,76285..76437,76515..76598,76681..76769,76850..76983,77065..77182,77262..77469,77545..77652,77764..77946,78040..78156))	Acanthamoeba castellanii str. Neff	14915276
ACA1_125820	CDS	ACA1_125820	NW_004457369.1	79424	81951	D	encoded by transcript ACA1_125820A; uncharacterized protein	join(79424..79677,79740..79780,79879..79965,80058..80215,80291..80438,80513..80587,80665..80864,80954..81049,81125..81278,81356..81489,81558..81644,81741..81788,81859..81951)	Acanthamoeba castellanii str. Neff	14915277
ACA1_125830	CDS	ACA1_125830	NW_004457369.1	82659	83254	D	encoded by transcript ACA1_125830A; uncharacterized protein	join(82659..82818,82980..>83254)	Acanthamoeba castellanii str. Neff	14915254
ACA1_066410	CDS	ACA1_066410	NW_004457368.1	90	491	R	encoded by transcript ACA1_066410A; ankyrin repeat-containing protein	complement(<90..491)	Acanthamoeba castellanii str. Neff	14915243
ACA1_066420	CDS	ACA1_066420	NW_004457368.1	666	1347	D	encoded by transcript ACA1_066420A; uncharacterized protein	join(666..1002,1073..1347)	Acanthamoeba castellanii str. Neff	14915225
ACA1_066530	CDS	ACA1_066530	NW_004457368.1	6222	6854	R	encoded by transcript ACA1_066530A; alfaL-rhamnosidase	complement(join(6222..6290,6357..6667,6731..6854))	Acanthamoeba castellanii str. Neff	14915226
ACA1_066550	CDS	ACA1_066550	NW_004457368.1	11238	11700	R	encoded by transcript ACA1_066550A; uncharacterized protein	complement(join(11238..11425,11480..11614,11673..11700))	Acanthamoeba castellanii str. Neff	14915228
ACA1_066570	CDS	ACA1_066570	NW_004457368.1	12293	12874	D	encoded by transcript ACA1_066570A; uncharacterized protein	join(12293..12585,12754..12874)	Acanthamoeba castellanii str. Neff	14915230
ACA1_066580	CDS	ACA1_066580	NW_004457368.1	13001	20950	D	encoded by transcript ACA1_066580A; ubiquitin protein ligase E3 component protein	join(13001..13031,13049..13157,13223..13953,14042..14220,14304..14410,14500..14896,14977..15522,15613..15811,15874..16007,16088..16160,16233..16881,16958..17792,17862..18194,18287..18347,18439..18563,18634..19891,19968..20247,20306..20483,20585..20670,20836..20950)	Acanthamoeba castellanii str. Neff	14915231
ACA1_066590	CDS	ACA1_066590	NW_004457368.1	21335	21949	D	encoded by transcript ACA1_066590A; uncharacterized protein	21335..21949	Acanthamoeba castellanii str. Neff	14915232
ACA1_066600	CDS	ACA1_066600	NW_004457368.1	22152	27467	R	encoded by transcript ACA1_066600A; Myotubularinrelated protein 2, putative	complement(join(22152..22500,22627..22705,22823..22938,23020..23175,23246..23401,23468..23818,23837..23959,24060..24361,24488..24602,24680..24720,24799..24872,24964..25069,25154..25258,25323..25427,25503..25598,25724..25826,25916..26067,26144..26215,26287..26404,26512..27007,27344..27467))	Acanthamoeba castellanii str. Neff	14915233
ACA1_066610	CDS	ACA1_066610	NW_004457368.1	27668	31670	D	encoded by transcript ACA1_066610A; uncharacterized protein	join(27668..27784,27859..28066,28155..28244,28322..28506,28572..28706,28860..28965,29278..29462,29528..29662,29881..29986,30060..30127,30230..30334,30437..30601,30671..30739,30817..31042,31072..31670)	Acanthamoeba castellanii str. Neff	14915234
ACA1_066720	CDS	ACA1_066720	NW_004457368.1	31824	35234	D	encoded by transcript ACA1_066720A; exonuclease, putative	join(31824..32487,32559..32693,32818..32934,33015..33282,33356..33494,33577..34093,34173..34634,34719..35088,35123..35234)	Acanthamoeba castellanii str. Neff	14915235
ACA1_066730	CDS	ACA1_066730	NW_004457368.1	35545	36363	R	encoded by transcript ACA1_066730A; ankyrin repeat-containing protein	complement(join(35545..35657,35747..35882,35996..36124,36226..36363))	Acanthamoeba castellanii str. Neff	14915236
ACA1_066740	CDS	ACA1_066740	NW_004457368.1	36479	37758	D	encoded by transcript ACA1_066740A; Phytanoyl-CoA dioxygenase	join(36479..36848,36957..37094,37171..37217,37297..37368,37427..37526,37607..37758)	Acanthamoeba castellanii str. Neff	14915237
ACA1_066750	CDS	ACA1_066750	NW_004457368.1	37917	39409	R	encoded by transcript ACA1_066750A; Fbox domain containing protein	complement(join(37917..38209,38313..38578,38662..38829,39015..39246,39346..39409))	Acanthamoeba castellanii str. Neff	14915238
ACA1_066760	CDS	ACA1_066760	NW_004457368.1	39614	40819	R	encoded by transcript ACA1_066760A; Actin1	complement(join(39614..40373,40452..40819))	Acanthamoeba castellanii str. Neff	14915239
ACA1_066770	CDS	ACA1_066770	NW_004457368.1	41290	42386	R	encoded by transcript ACA1_066770A; methyltransferase	complement(join(41290..41426,41530..41804,41874..42164,42227..42276,42357..42386))	Acanthamoeba castellanii str. Neff	14915240
ACA1_066780	CDS	ACA1_066780	NW_004457368.1	42617	43339	R	encoded by transcript ACA1_066780A; transcription initiation factor tfiid subunit 13, putative	complement(join(42617..42775,42811..42849,42945..43017,43086..43110,43195..43339))	Acanthamoeba castellanii str. Neff	14915241
ACA1_066790	CDS	ACA1_066790	NW_004457368.1	43427	44364	R	encoded by transcript ACA1_066790A; uncharacterized protein	complement(join(43427..43554,43618..43718,43794..43945,44012..44154,44229..44364))	Acanthamoeba castellanii str. Neff	14915242
ACA1_066800	CDS	ACA1_066800	NW_004457368.1	44384	44795	R	encoded by transcript ACA1_066800A; uncharacterized protein	complement(join(44384..44571,44645..44795))	Acanthamoeba castellanii str. Neff	14915244
ACA1_066810	CDS	ACA1_066810	NW_004457368.1	45079	50552	D	encoded by transcript ACA1_066810A; Myotubularinrelated protein 2, putative	join(45079..46114,46239..46438,46533..46703,46801..46932,47011..47139,47228..47320,47459..47643,47711..47827,47962..48067,48157..48400,48469..48563,48662..48785,48892..49080,49195..49285,49384..49486,49578..49675,49796..50552)	Acanthamoeba castellanii str. Neff	14915245
ACA1_066820	CDS	ACA1_066820	NW_004457368.1	51820	52773	R	encoded by transcript ACA1_066820A; Mimivirus encoded protein, putative	complement(join(51820..52388,52455..52773))	Acanthamoeba castellanii str. Neff	14915246
ACA1_066830	CDS	ACA1_066830	NW_004457368.1	53270	53887	R	encoded by transcript ACA1_066830A; Rasrelated protein Rac1, putative	complement(53270..53887)	Acanthamoeba castellanii str. Neff	14915247
ACA1_066840	CDS	ACA1_066840	NW_004457368.1	54518	59122	R	encoded by transcript ACA1_066840A; SNF2 domain containing protein	complement(join(54518..55073,55152..55442,55528..55628,55704..56122,56216..56726,56809..56985,57069..57278,57368..57499,57589..57673,57759..57886,57977..58207,58268..58324,58397..59122))	Acanthamoeba castellanii str. Neff	14915248
ACA1_066850	CDS	ACA1_066850	NW_004457368.1	60549	64338	D	encoded by transcript ACA1_066850A; uncharacterized protein	join(60549..60677,60751..60933,61026..61333,61444..61595,61689..61816,61905..62025,62110..62228,62321..62459,62526..62947,62978..63068,63166..63263,63358..63575,63647..63725,63840..63953,64066..64149,64174..64338)	Acanthamoeba castellanii str. Neff	14915249
ACA1_066860	CDS	ACA1_066860	NW_004457368.1	64423	65582	R	encoded by transcript ACA1_066860A; uncharacterized protein	complement(join(64423..64573,64669..64754,64836..64991,65091..65266,65366..65459,65505..65582))	Acanthamoeba castellanii str. Neff	14915250
ACA1_066870	CDS	ACA1_066870	NW_004457368.1	65732	68499	R	encoded by transcript ACA1_066870A; glucose6-phosphate isomerase	complement(join(65732..66016,66123..66191,66278..66450,66534..66624,66758..66841,66936..67042,67113..67221,67436..67590,67693..67824,67937..68121,68204..68499))	Acanthamoeba castellanii str. Neff	14915251
ACA1_066880	CDS	ACA1_066880	NW_004457368.1	68907	70255	D	encoded by transcript ACA1_066880A; uncharacterized protein	join(68907..68953,69088..69410,69608..69846,69894..69990,70101..70255)	Acanthamoeba castellanii str. Neff	14915252
ACA1_066890	CDS	ACA1_066890	NW_004457368.1	70743	74024	D	encoded by transcript ACA1_066890A; uncharacterized protein	join(70743..71023,71322..71459,71495..71578,71756..71808,71847..72182,72440..72516,72961..73038,73149..73192,73269..73394,73490..73625,73754..73871,73948..74024)	Acanthamoeba castellanii str. Neff	14915253
ACA1_066900	CDS	ACA1_066900	NW_004457368.1	74658	75465	D	encoded by transcript ACA1_066900A; uncharacterized protein	74658..>75465	Acanthamoeba castellanii str. Neff	14915217
ACA1_066910	CDS	ACA1_066910	NW_004457368.1	78300	81237	D	encoded by transcript ACA1_066910A; serine/threonine kinase	join(78300..78392,78475..78562,78629..78792,78916..79167,79259..79355,79455..79561,79665..79870,79953..80122,80187..80386,80574..80690,80782..80910,81001..81237)	Acanthamoeba castellanii str. Neff	14915218
ACA1_066920	CDS	ACA1_066920	NW_004457368.1	81277	84197	D	encoded by transcript ACA1_066920A; protein kinase domain containing protein	join(81277..81371,81496..81824,81919..82228,82322..82439,82537..82616,82699..82871,82958..83127,83205..83345,83419..83470,83543..83597,83663..83833,83935..84025,84126..84197)	Acanthamoeba castellanii str. Neff	14915219
ACA1_066930	CDS	ACA1_066930	NW_004457368.1	84526	87787	D	encoded by transcript ACA1_066930A; ABC transporter, ATPbinding domain containing protein	join(84526..84684,84927..84985,85128..85217,85312..85435,85537..85666,85751..86020,86149..86535,86659..86815,86891..87142,87250..87412,87531..87606,87675..87787)	Acanthamoeba castellanii str. Neff	14915220
ACA1_066940	CDS	ACA1_066940	NW_004457368.1	88900	89763	R	encoded by transcript ACA1_066940A; uncharacterized protein	complement(join(88900..89112,89281..89365,89440..89522,89650..89763))	Acanthamoeba castellanii str. Neff	14915221
ACA1_066950	CDS	ACA1_066950	NW_004457368.1	92723	93040	D	encoded by transcript ACA1_066950A; transposase	<92723..93040	Acanthamoeba castellanii str. Neff	14915222
ACA1_066960	CDS	ACA1_066960	NW_004457368.1	93421	95090	D	encoded by transcript ACA1_066960A; uncharacterized protein	join(93421..93753,93823..93905,94060..94311,94362..94660,94861..95090)	Acanthamoeba castellanii str. Neff	14915223
ACA1_067070	CDS	ACA1_067070	NW_004457368.1	101333	101730	R	encoded by transcript ACA1_067070A; uncharacterized protein	complement(join(101333..101480,101621..101730))	Acanthamoeba castellanii str. Neff	14915224
ACA1_271250	CDS	ACA1_271250	NW_004457367.1	3177	5778	R	encoded by transcript ACA1_271250A; uncharacterized protein	complement(join(3177..3371,3502..3575,3711..3827,3931..4039,4107..4931,5095..5204,5420..5539,5724..5778))	Acanthamoeba castellanii str. Neff	14915197
ACA1_271260	CDS	ACA1_271260	NW_004457367.1	5956	6666	R	encoded by transcript ACA1_271260A; uncharacterized protein	complement(join(5956..6029,6149..6179,6364..6666))	Acanthamoeba castellanii str. Neff	14915196
ACA1_271270	CDS	ACA1_271270	NW_004457367.1	7289	8882	D	encoded by transcript ACA1_271270A; atpdependent rna helicase ddx6, putative	join(7289..7622,7683..7921,7994..8245,8342..8495,8638..8882)	Acanthamoeba castellanii str. Neff	14915185
ACA1_271280	CDS	ACA1_271280	NW_004457367.1	9202	11459	R	encoded by transcript ACA1_271280A; uncharacterized protein	complement(join(9202..9322,9407..9474,9582..9690,9824..9891,10035..10154,10267..10378,10486..10652,10802..10868,11012..11101,11285..11334,11424..11459))	Acanthamoeba castellanii str. Neff	14915186
ACA1_271290	CDS	ACA1_271290	NW_004457367.1	11643	12880	R	encoded by transcript ACA1_271290A; uncharacterized protein	complement(join(11643..11827,11964..12075,12197..12268,12393..12486,12592..12743,12809..12880))	Acanthamoeba castellanii str. Neff	14915187
ACA1_271300	CDS	ACA1_271300	NW_004457367.1	13110	14129	D	encoded by transcript ACA1_271300A; Rpl7A, putative	join(13110..13437,13527..13756,13839..14129)	Acanthamoeba castellanii str. Neff	14915188
ACA1_271310	CDS	ACA1_271310	NW_004457367.1	14302	17962	D	encoded by transcript ACA1_271310A; uncharacterized protein	join(14302..14364,14472..14559,14717..15969,16090..16161,16226..16328,16400..16567,16777..16826,16971..17027,17203..17277,17456..17521,17723..17801,17820..17962)	Acanthamoeba castellanii str. Neff	14915189
ACA1_271320	CDS	ACA1_271320	NW_004457367.1	18229	20281	R	encoded by transcript ACA1_271320A; cudAlike protein, putative	complement(join(18229..18332,18482..19635,19953..20281))	Acanthamoeba castellanii str. Neff	14915190
ACA1_271330	CDS	ACA1_271330	NW_004457367.1	20827	22426	D	encoded by transcript ACA1_271330A; uncharacterized protein	join(20827..20879,20961..21073,21212..21289,21465..21570,21664..21754,21935..22426)	Acanthamoeba castellanii str. Neff	14915191
ACA1_271340	CDS	ACA1_271340	NW_004457367.1	22563	23833	R	encoded by transcript ACA1_271340A; phosphoribosylpyrophosphate synthetase	complement(join(22563..23167,23446..23578,23648..23833))	Acanthamoeba castellanii str. Neff	14915192
ACA1_271350	CDS	ACA1_271350	NW_004457367.1	24186	26587	D	encoded by transcript ACA1_271350A; uncharacterized protein	join(24186..24352,24720..24780,25012..25069,25208..25315,25546..25599,25708..25811,25960..26041,26168..26265,26465..26587)	Acanthamoeba castellanii str. Neff	14915193
ACA1_271360	CDS	ACA1_271360	NW_004457367.1	32299	32726	D	encoded by transcript ACA1_271360A; uncharacterized protein	join(32299..32387,32459..32726)	Acanthamoeba castellanii str. Neff	14915194
ACA1_271370	CDS	ACA1_271370	NW_004457367.1	33027	37670	D	encoded by transcript ACA1_271370A; Phosphatidylinositol4-phosphate 5-Kinase	join(33027..33725,33933..34085,34168..34198,34366..34441,34668..34749,34970..35125,35348..35470,35640..35699,35797..35988,36151..36281,36465..36630,36753..36802,37035..37477,37570..37670)	Acanthamoeba castellanii str. Neff	14915195
ACA1_271380	CDS	ACA1_271380	NW_004457367.1	37929	39034	D	encoded by transcript ACA1_271380A; ribosomal protein L10, putative	join(37929..38105,38222..39034)	Acanthamoeba castellanii str. Neff	14915208
ACA1_271390	CDS	ACA1_271390	NW_004457367.1	39204	40173	R	encoded by transcript ACA1_271390A; NLI interacting factor (NIF) family protein	complement(join(39204..39413,39586..39723,39820..40173))	Acanthamoeba castellanii str. Neff	14915209
ACA1_271500	CDS	ACA1_271500	NW_004457367.1	43127	48064	D	encoded by transcript ACA1_271500A; leucine rich repeat domain containing protein	join(43127..43397,43552..43937,44133..44396,44585..44731,44892..45198,45366..45719,45771..46015,46152..46341,46526..46709,46788..46888,46992..47183,47301..47469,47608..48064)	Acanthamoeba castellanii str. Neff	14915210
ACA1_271510	CDS	ACA1_271510	NW_004457367.1	54428	55113	D	encoded by transcript ACA1_271510A; uncharacterized protein	join(54428..54453,54897..55113)	Acanthamoeba castellanii str. Neff	14915211
ACA1_271520	CDS	ACA1_271520	NW_004457367.1	56529	61805	D	encoded by transcript ACA1_271520A; RhoGEF domain containing protein	join(56529..56822,57003..57173,57400..57510,57679..57799,57934..58022,58205..58526,58666..58838,59009..59083,59190..59273,59448..59576,59813..59950,60171..60296,60339..60626,60774..60901,61049..61139,61298..61363,61466..61522,61689..61805)	Acanthamoeba castellanii str. Neff	14915212
ACA1_271530	CDS	ACA1_271530	NW_004457367.1	62127	62929	R	encoded by transcript ACA1_271530A; uncharacterized protein	complement(join(62127..62169,62304..62388,62509..62929))	Acanthamoeba castellanii str. Neff	14915213
ACA1_271540	CDS	ACA1_271540	NW_004457367.1	63479	70572	D	encoded by transcript ACA1_271540A; leucine rich repeat domain containing protein	join(63479..63601,63647..64133,64352..64485,64661..65146,65336..65456,65544..65620,65726..65835,65959..66094,66245..66389,66507..66592,66736..66798,66945..67038,67111..67198,67462..67616,67638..67715,67872..68001,68115..68186,68351..68461,68644..68783,68919..68996,69231..69336,69436..69562,69654..69791,70037..70187,70259..70572)	Acanthamoeba castellanii str. Neff	14915214
ACA1_271550	CDS	ACA1_271550	NW_004457367.1	70735	72175	R	encoded by transcript ACA1_271550A; uncharacterized protein	complement(join(70735..71426,71513..71694,71772..72175))	Acanthamoeba castellanii str. Neff	14915215
ACA1_271560	CDS	ACA1_271560	NW_004457367.1	72627	74689	R	encoded by transcript ACA1_271560A; uncharacterized protein	complement(join(72627..72722,72797..74689))	Acanthamoeba castellanii str. Neff	14915216
ACA1_271570	CDS	ACA1_271570	NW_004457367.1	75382	77481	R	encoded by transcript ACA1_271570A; cdk10/11, putative	complement(join(75382..75525,75628..75822,75933..76158,76245..76394,76561..76882,77043..77481))	Acanthamoeba castellanii str. Neff	14915198
ACA1_271580	CDS	ACA1_271580	NW_004457367.1	77575	79460	R	encoded by transcript ACA1_271580A; protein phosphatase 1, regulatory subunit 7, putative	complement(join(77575..77631,77735..77788,77947..78138,78208..78249,78354..78428,78552..78607,78652..78674,78703..78819,78921..79048,79158..79223,79326..79460))	Acanthamoeba castellanii str. Neff	14915199
ACA1_271590	CDS	ACA1_271590	NW_004457367.1	79574	81232	D	encoded by transcript ACA1_271590A; slime mold cyclic amp receptor protein	join(79574..79788,79902..80034,80312..80389,80517..80584,80696..80931,81018..81232)	Acanthamoeba castellanii str. Neff	14915200
ACA1_271600	CDS	ACA1_271600	NW_004457367.1	81386	83947	R	encoded by transcript ACA1_271600A; cation diffusion facilitator family transporter superfamily protein	complement(join(81386..81521,81610..81682,81800..81891,81998..82110,82259..82347,82457..82531,82619..82726,82850..82896,82931..83086,83216..83307,83426..83581,83861..83947))	Acanthamoeba castellanii str. Neff	14915201
ACA1_271720	CDS	ACA1_271720	NW_004457367.1	88899	93587	R	encoded by transcript ACA1_271720A; GTPaseactivator protein for Ras-like GTPase	complement(join(88899..88961,89058..89219,89316..89622,89736..89923,90024..90329,90435..90536,90774..90829,90945..91062,91171..91233,91312..91393,91447..91574,91678..91857,91979..92201,92269..92324,92406..92521,92595..92700,92811..92915,93032..93106,93137..93271,93301..93435,93558..93587))	Acanthamoeba castellanii str. Neff	14915203
ACA1_271730	CDS	ACA1_271730	NW_004457367.1	94195	95271	R	encoded by transcript ACA1_271730A; syntaxin 6, putative	complement(join(94195..94324,94477..94546,94641..94709,94883..94949,95088..95160,95246..95271))	Acanthamoeba castellanii str. Neff	14915204
ACA1_271740	CDS	ACA1_271740	NW_004457367.1	95871	98756	D	encoded by transcript ACA1_271740A; SAM domain (Sterile alpha motif) domain containing protein	join(95871..96036,96354..97091,97227..97390,97527..97842,97898..98106,98224..98399,98486..98756)	Acanthamoeba castellanii str. Neff	14915205
ACA1_271750	CDS	ACA1_271750	NW_004457367.1	99663	101489	R	encoded by transcript ACA1_271750A; metal cation transporter, ZIP subfamily protein	complement(join(99663..99784,99880..99981,100061..100186,100285..100342,100417..100515,100625..100680,100770..100862,100967..101040,101284..101489))	Acanthamoeba castellanii str. Neff	14915206
ACA1_271860	CDS	ACA1_271860	NW_004457367.1	101834	104084	D	encoded by transcript ACA1_271860A; protein serine/threonine kinase	join(101834..101997,102159..102333,102478..102561,102676..102771,102905..103075,103208..103405,103544..103651,103732..103803,103906..103967,104072..104084)	Acanthamoeba castellanii str. Neff	14915207
ACA1_320940	CDS	ACA1_320940	NW_004457366.1	125	550	D	encoded by transcript ACA1_320940A; uncharacterized protein	<125..550	Acanthamoeba castellanii str. Neff	14915182
ACA1_320950	CDS	ACA1_320950	NW_004457366.1	597	1665	R	encoded by transcript ACA1_320950A; SET domain containing protein	complement(join(597..756,847..978,1052..1169,1254..1331,1407..1665))	Acanthamoeba castellanii str. Neff	14915183
ACA1_320960	CDS	ACA1_320960	NW_004457366.1	2563	4754	R	encoded by transcript ACA1_320960A; DNA primase small subunit	complement(join(2563..2714,2796..2936,3047..3182,3263..3470,3562..3660,3727..3829,3904..3975,4053..4161,4224..4289,4361..4467,4634..4754))	Acanthamoeba castellanii str. Neff	14915184
ACA1_320970	CDS	ACA1_320970	NW_004457366.1	5089	5415	R	encoded by transcript ACA1_320970A; uncharacterized protein	complement(5089..5415)	Acanthamoeba castellanii str. Neff	14915173
ACA1_320980	CDS	ACA1_320980	NW_004457366.1	5827	9928	D	encoded by transcript ACA1_320980A; RNA recognition motif domain containing protein	join(5827..5973,6031..6131,6281..6408,6479..6710,6789..6919,7015..7160,7261..7328,7437..7540,7625..8020,8147..8350,8442..8714,8785..8878,8977..9776,9858..9928)	Acanthamoeba castellanii str. Neff	14915174
ACA1_320990	CDS	ACA1_320990	NW_004457366.1	10087	11354	R	encoded by transcript ACA1_320990A; K+ channel tetramerization subfamily protein	complement(join(10087..10388,10511..11354))	Acanthamoeba castellanii str. Neff	14915175
ACA1_321000	CDS	ACA1_321000	NW_004457366.1	11938	13176	D	encoded by transcript ACA1_321000A; kelch repeatcontaining protein	join(11938..12082,12187..12351,12457..12609,12711..12866,12983..13176)	Acanthamoeba castellanii str. Neff	14915176
ACA1_321010	CDS	ACA1_321010	NW_004457366.1	13242	16037	D	encoded by transcript ACA1_321010A; uncharacterized protein	join(13242..13377,13470..13612,13771..14061,14149..14298,14394..14709,14796..14896,14948..15019,15090..15351,15426..15625,15698..15887,15964..16037)	Acanthamoeba castellanii str. Neff	14915177
ACA1_321020	CDS	ACA1_321020	NW_004457366.1	17283	19223	D	encoded by transcript ACA1_321020A; uncharacterized protein	join(17283..17297,17403..18042,18113..18247,18349..19223)	Acanthamoeba castellanii str. Neff	14915178
ACA1_321030	CDS	ACA1_321030	NW_004457366.1	20934	23145	R	encoded by transcript ACA1_321030A; uncharacterized protein	complement(join(20934..21467,21761..21835,21981..22378,22464..22563,22653..22889,22990..23145))	Acanthamoeba castellanii str. Neff	14915179
ACA1_321040	CDS	ACA1_321040	NW_004457366.1	23794	26927	D	encoded by transcript ACA1_321040A; DNA replication licensing factor mcm3, putative	join(<23794..24055,24135..24142,24155..24629,24707..24842,24926..25097,25184..25341,25426..25661,25769..26549,26639..26731,26819..26927)	Acanthamoeba castellanii str. Neff	14915180
ACA1_321050	CDS	ACA1_321050	NW_004457366.1	27138	27770	R	encoded by transcript ACA1_321050A; uncharacterized protein	complement(join(27138..27422,27468..27770))	Acanthamoeba castellanii str. Neff	14915181
ACA1_321060	CDS	ACA1_321060	NW_004457366.1	28057	31530	R	encoded by transcript ACA1_321060A; uncharacterized protein	complement(join(28057..28119,28197..30853,31236..31332,31426..31530))	Acanthamoeba castellanii str. Neff	14915172
ACA1_077740	CDS	ACA1_077740	NW_004457365.1	350	739	R	encoded by transcript ACA1_077740A; uncharacterized protein	complement(join(350..541,713..739))	Acanthamoeba castellanii str. Neff	14915147
ACA1_077750	CDS	ACA1_077750	NW_004457365.1	3273	3497	R	encoded by transcript ACA1_077750A; uncharacterized protein	complement(3273..3497)	Acanthamoeba castellanii str. Neff	14915148
ACA1_077760	CDS	ACA1_077760	NW_004457365.1	6057	6956	D	encoded by transcript ACA1_077760A; uncharacterized protein	join(6057..6246,6429..6855,6899..6956)	Acanthamoeba castellanii str. Neff	14915160
ACA1_077770	CDS	ACA1_077770	NW_004457365.1	8988	10064	D	encoded by transcript ACA1_077770A; uncharacterized protein	join(8988..9265,9374..10064)	Acanthamoeba castellanii str. Neff	14915161
ACA1_077780	CDS	ACA1_077780	NW_004457365.1	10861	12471	D	encoded by transcript ACA1_077780A; SAM domain (Sterile alpha motif) domain containing protein	10861..12471	Acanthamoeba castellanii str. Neff	14915162
ACA1_077790	CDS	ACA1_077790	NW_004457365.1	12554	13108	D	encoded by transcript ACA1_077790A; eukaryotic translation initiation factor, putative	12554..13108	Acanthamoeba castellanii str. Neff	14915163
ACA1_077800	CDS	ACA1_077800	NW_004457365.1	13221	13876	R	encoded by transcript ACA1_077800A; NAD(+) ADPribosyltransferase-3, putative	complement(join(13221..13299,13435..13682,13796..13876))	Acanthamoeba castellanii str. Neff	14915164
ACA1_077810	CDS	ACA1_077810	NW_004457365.1	14175	14690	D	encoded by transcript ACA1_077810A; eukaryotic initiation factor 4, putative	join(14175..14582,14598..14690)	Acanthamoeba castellanii str. Neff	14915149
ACA1_077820	CDS	ACA1_077820	NW_004457365.1	14773	15330	D	encoded by transcript ACA1_077820A; helicase conserved Cterminal domain containing protein	14773..15330	Acanthamoeba castellanii str. Neff	14915150
ACA1_077830	CDS	ACA1_077830	NW_004457365.1	15453	27242	R	encoded by transcript ACA1_077830A; Poly(ADP-ribose) polymerase catalytic domain containing protein	complement(join(15453..15531,15653..15900,16014..16180,16264..16334,16411..16527,16624..16760,16849..17151,17274..18044,18110..18270,18391..18571,18664..18830,18949..19264,19346..19484,19564..20765,20860..21551,21652..21762,21870..22077,22184..22285,22409..23158,23255..23794,23902..24091,24179..24300,24394..24621,24740..24955,25053..25838,25907..26121,26196..26307,26523..27242))	Acanthamoeba castellanii str. Neff	14915151
ACA1_077840	CDS	ACA1_077840	NW_004457365.1	28119	28358	D	encoded by transcript ACA1_077840A; uncharacterized protein	28119..28358	Acanthamoeba castellanii str. Neff	14915152
ACA1_077850	CDS	ACA1_077850	NW_004457365.1	28532	32245	R	encoded by transcript ACA1_077850A; elongation factor 1alpha	complement(join(28532..28727,28874..28982,29300..29421,29562..29663,29860..30012,30222..30288,30533..30698,30787..30990,31084..31161,31279..31407,31779..31958,32042..32245))	Acanthamoeba castellanii str. Neff	14915153
ACA1_077860	CDS	ACA1_077860	NW_004457365.1	33256	33957	D	encoded by transcript ACA1_077860A; uncharacterized protein	33256..33957	Acanthamoeba castellanii str. Neff	14915154
ACA1_077870	CDS	ACA1_077870	NW_004457365.1	34563	35642	D	encoded by transcript ACA1_077870A; uncharacterized protein	join(34563..34834,34901..34941,35062..35191,35255..35642)	Acanthamoeba castellanii str. Neff	14915165
ACA1_077880	CDS	ACA1_077880	NW_004457365.1	35790	36665	D	encoded by transcript ACA1_077880A; reverse transcriptase	35790..36665	Acanthamoeba castellanii str. Neff	14915166
ACA1_077890	CDS	ACA1_077890	NW_004457365.1	37111	38658	D	encoded by transcript ACA1_077890A; GapPol polyprotein	37111..38658	Acanthamoeba castellanii str. Neff	14915167
ACA1_077900	CDS	ACA1_077900	NW_004457365.1	38848	40638	D	encoded by transcript ACA1_077900A; uncharacterized protein	join(38848..38932,39006..39383,39461..39526,39616..39708,39790..39870,39952..40026,40134..40214,40300..40374,40460..40540,40598..40638)	Acanthamoeba castellanii str. Neff	14915168
ACA1_077910	CDS	ACA1_077910	NW_004457365.1	41352	41660	R	encoded by transcript ACA1_077910A; uncharacterized protein	complement(41352..41660)	Acanthamoeba castellanii str. Neff	14915169
ACA1_077920	CDS	ACA1_077920	NW_004457365.1	42219	43649	R	encoded by transcript ACA1_077920A; uncharacterized protein	complement(join(42219..42390,42492..42579,42710..42862,42971..43107,43182..43299,43421..43649))	Acanthamoeba castellanii str. Neff	14915170
ACA1_077930	CDS	ACA1_077930	NW_004457365.1	43917	45548	D	encoded by transcript ACA1_077930A; glutathione Stransferase	join(43917..44021,44113..44154,44253..44329,44415..44478,44566..44691,44768..44845,44913..45123,45271..45548)	Acanthamoeba castellanii str. Neff	14915171
ACA1_077940	CDS	ACA1_077940	NW_004457365.1	45967	47058	R	encoded by transcript ACA1_077940A; Autophagy-related protein 27 protein	complement(join(45967..46186,46272..46782,46881..47058))	Acanthamoeba castellanii str. Neff	14915155
ACA1_077950	CDS	ACA1_077950	NW_004457365.1	49058	50220	R	encoded by transcript ACA1_077950A; Autophagy-related protein 27 protein	complement(join(49058..49090,49184..49310,49395..49650,49799..49951,50043..50220))	Acanthamoeba castellanii str. Neff	14915156
ACA1_077960	CDS	ACA1_077960	NW_004457365.1	51163	56891	R	encoded by transcript ACA1_077960A; phospholipase	complement(join(51163..51431,51562..51702,51776..51908,52216..52507,52606..52701,52842..52916,53008..53096,53177..53974,54064..54211,54463..54577,54699..54827,54908..55015,55107..55175,55279..55305,55479..55547,55656..56019,56106..56231,56384..56626,56778..56891))	Acanthamoeba castellanii str. Neff	14915157
ACA1_077970	CDS	ACA1_077970	NW_004457365.1	57339	59311	D	encoded by transcript ACA1_077970A; Prokumamolisin, activation domain containing protein	join(57339..57842,57971..58118,58209..58327,58364..59311)	Acanthamoeba castellanii str. Neff	14915158
ACA1_077980	CDS	ACA1_077980	NW_004457365.1	60196	66080	D	encoded by transcript ACA1_077980A; domain found in dishevelled, egl-10, and pleckstrin domain containing protein	join(60196..62096,62108..62453,62523..63048,63143..63564,63666..63746,63860..64012,64111..64224,64333..64410,64508..64633,65046..65100,65232..65295,65440..65638,65767..65900,66011..66080)	Acanthamoeba castellanii str. Neff	14915159
ACA1_077990	CDS	ACA1_077990	NW_004457365.1	66186	67148	R	encoded by transcript ACA1_077990A; EGFlike domain containing protein	complement(join(66186..66273,66348..66449,66508..66653,66759..67148))	Acanthamoeba castellanii str. Neff	14915137
ACA1_078000	CDS	ACA1_078000	NW_004457365.1	67816	69418	D	encoded by transcript ACA1_078000A; PH domain containing protein	join(67816..67926,68016..68156,68227..68271,68352..68609,68701..68878,68947..69049,69142..69418)	Acanthamoeba castellanii str. Neff	14915138
ACA1_078010	CDS	ACA1_078010	NW_004457365.1	70076	71133	R	encoded by transcript ACA1_078010A; uncharacterized protein	complement(join(70076..70094,70254..70408,70496..70609,70757..70854,71013..71133))	Acanthamoeba castellanii str. Neff	14915139
ACA1_078020	CDS	ACA1_078020	NW_004457365.1	71292	76774	R	encoded by transcript ACA1_078020A; divergent AAA domain containing protein	complement(join(71292..73441,73542..73760,73866..73985,74102..75167,75269..76012,76077..76198,76306..76774))	Acanthamoeba castellanii str. Neff	14915140
ACA1_078030	CDS	ACA1_078030	NW_004457365.1	77046	78606	D	encoded by transcript ACA1_078030A; dimethyladenosine transferase	join(77046..77121,77211..77272,77343..77491,77589..77732,77848..77929,78114..78335,78457..78606)	Acanthamoeba castellanii str. Neff	14915141
ACA1_078040	CDS	ACA1_078040	NW_004457365.1	78855	81453	D	encoded by transcript ACA1_078040A; uridine kinase	join(78855..78975,79150..79264,79400..79500,79612..79851,79962..80059,80176..80268,80407..80580,80692..80925,81034..81123,81232..81453)	Acanthamoeba castellanii str. Neff	14915142
ACA1_078060	CDS	ACA1_078060	NW_004457365.1	84187	89758	D	encoded by transcript ACA1_078060A; FYVE zinc finger domain containing protein	join(84187..84207,84363..84569,84649..85780,86277..86666,86795..86988,87109..89278,89366..89478,89627..89758)	Acanthamoeba castellanii str. Neff	14915144
ACA1_078070	CDS	ACA1_078070	NW_004457365.1	90694	91707	D	encoded by transcript ACA1_078070A; uncharacterized protein	90694..91707	Acanthamoeba castellanii str. Neff	14915145
ACA1_078080	CDS	ACA1_078080	NW_004457365.1	92689	96131	D	encoded by transcript ACA1_078080A; Ankyrin repeat containing protein	join(92689..92820,92946..93058,93164..93282,93411..94009,94138..94180,94307..94528,94690..94824,94928..95089,95162..95473,95584..95743,95835..96034,96056..>96131)	Acanthamoeba castellanii str. Neff	14915146
ACA1_191480	CDS	ACA1_191480	NW_004457364.1	11	1495	R	encoded by transcript ACA1_191480A; CS domain containing protein	complement(join(<11..186,290..491,577..673,767..944,1042..1166,1254..1495))	Acanthamoeba castellanii str. Neff	14915047
ACA1_191490	CDS	ACA1_191490	NW_004457364.1	1649	3789	R	encoded by transcript ACA1_191490A; uncharacterized protein	complement(join(1649..1778,1883..2076,2183..2272,2374..2550,2613..3123,3198..3346,3417..3530,3631..3789))	Acanthamoeba castellanii str. Neff	14915046
ACA1_191500	CDS	ACA1_191500	NW_004457364.1	3905	6541	R	encoded by transcript ACA1_191500A; phosphoenolpyruvate carboxykinase (GTP), putative	complement(join(3905..4122,4262..4356,4445..5039,5168..5246,5322..5425,5534..5768,6023..6541))	Acanthamoeba castellanii str. Neff	14915135
ACA1_191510	CDS	ACA1_191510	NW_004457364.1	6989	8664	D	encoded by transcript ACA1_191510A; RNA recognition motif domain containing protein	join(6989..6996,7034..7246,7284..7458,7585..7716,8252..8315,8435..8664)	Acanthamoeba castellanii str. Neff	14915136
ACA1_191520	CDS	ACA1_191520	NW_004457364.1	8804	10952	R	encoded by transcript ACA1_191520A; asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase) family protein	complement(join(8804..9067,9177..9344,9456..9601,9698..9752,9894..10144,10252..10423,10549..10693,10861..10952))	Acanthamoeba castellanii str. Neff	14915089
ACA1_191530	CDS	ACA1_191530	NW_004457364.1	11180	13008	D	encoded by transcript ACA1_191530A; Peroxin 12 (Pex12), putative	join(11180..11293,11448..11553,11650..11801,11935..12297,12401..12661,12802..13008)	Acanthamoeba castellanii str. Neff	14915090
ACA1_191540	CDS	ACA1_191540	NW_004457364.1	13278	14434	R	encoded by transcript ACA1_191540A; uncharacterized protein	complement(join(13278..13310,13409..13686,13802..13925,14021..14133,14245..14434))	Acanthamoeba castellanii str. Neff	14915091
ACA1_191550	CDS	ACA1_191550	NW_004457364.1	14727	15714	D	encoded by transcript ACA1_191550A; ribosomal protein L13, putative	join(14727..14829,14973..15154,15313..15714)	Acanthamoeba castellanii str. Neff	14915048
ACA1_191560	CDS	ACA1_191560	NW_004457364.1	15904	17633	R	encoded by transcript ACA1_191560A; phosphogluconate dehydrogenase (decarboxylating), Cterminal domain containing protein	complement(join(15904..17253,17541..17633))	Acanthamoeba castellanii str. Neff	14915049
ACA1_191570	CDS	ACA1_191570	NW_004457364.1	17864	19921	D	encoded by transcript ACA1_191570A; cation diffusion facilitator family transporter superfamily protein	join(17864..18065,18235..18343,18546..18596,18896..18987,19156..19249,19372..19522,19613..19673,19779..19921)	Acanthamoeba castellanii str. Neff	14915050
ACA1_191580	CDS	ACA1_191580	NW_004457364.1	20005	27045	R	encoded by transcript ACA1_191580A; myosin head (motor domain) domain containing protein	complement(join(20005..20162,20253..20514,20606..20707,20725..20781,20982..21080,21227..21309,21461..21566,21591..21842,21972..22032,22234..22298,22454..22546,22637..22757,22895..22975,23094..23178,23276..23315,23479..23678,23713..23780,23796..23911,24013..24162,24300..24476,24636..24760,24886..24940,25043..25132,25209..25291,25389..25487,25606..25710,25882..26063,26117..26432,26639..26936,26983..27045))	Acanthamoeba castellanii str. Neff	14915092
ACA1_191590	CDS	ACA1_191590	NW_004457364.1	27288	31794	R	encoded by transcript ACA1_191590A; uncharacterized protein	complement(join(27288..28823,29003..29054,29173..29291,29391..29509,29596..29739,29859..30141,30267..30404,30570..31024,31128..31355,31716..31794))	Acanthamoeba castellanii str. Neff	14915093
ACA1_191700	CDS	ACA1_191700	NW_004457364.1	33014	35960	R	encoded by transcript ACA1_191700A; Ras subfamily protein	complement(join(33014..33044,33141..33276,33366..33486,33612..33707,33799..33937,34058..34242,34379..34554,34689..34786,34873..34973,35080..35132,35230..35354,35785..35960))	Acanthamoeba castellanii str. Neff	14915094
ACA1_191710	CDS	ACA1_191710	NW_004457364.1	36905	38765	D	encoded by transcript ACA1_191710A; uncharacterized protein	join(36905..37099,37318..37390,37537..37752,38344..38765)	Acanthamoeba castellanii str. Neff	14915095
ACA1_191840	CDS	ACA1_191840	NW_004457364.1	50878	54636	D	encoded by transcript ACA1_191840A; Ser/Thr phosphatase family superfamily protein	join(50878..50921,51012..51144,51252..51292,51357..51450,51511..51568,51635..51810,51915..52069,52163..52257,52338..52454,52516..52680,52789..53269,53355..53394,53489..53596,53883..53994,54014..54126,54190..54345,54595..54636)	Acanthamoeba castellanii str. Neff	14915078
ACA1_191850	CDS	ACA1_191850	NW_004457364.1	57205	59220	R	encoded by transcript ACA1_191850A; calcium/ calmodulindependent protein kinase 1, putative	complement(join(57205..57359,57777..57824,57898..57923,57994..58048,58147..58183,58465..58549,58663..58883,59075..59090,59171..59220))	Acanthamoeba castellanii str. Neff	14915079
ACA1_191860	CDS	ACA1_191860	NW_004457364.1	59708	60722	D	encoded by transcript ACA1_191860A; uncharacterized protein	join(59708..60119,60208..60396,60506..60585,60660..60722)	Acanthamoeba castellanii str. Neff	14915080
ACA1_191870	CDS	ACA1_191870	NW_004457364.1	61464	62524	D	encoded by transcript ACA1_191870A; Proteintyrosine phosphatase	join(61464..61526,61627..61767,61846..61941,62021..62067,62263..62380,62420..62524)	Acanthamoeba castellanii str. Neff	14915081
ACA1_191880	CDS	ACA1_191880	NW_004457364.1	62855	66665	D	encoded by transcript ACA1_191880A; calponin domain containing protein	join(62855..63112,63223..63470,63586..63946,64069..64188,64383..64837,64959..65330,65538..65662,65876..66044,66204..66321,66459..66665)	Acanthamoeba castellanii str. Neff	14915082
ACA1_191890	CDS	ACA1_191890	NW_004457364.1	66855	67767	R	encoded by transcript ACA1_191890A; uncharacterized protein	complement(join(66855..66940,67004..67169,67285..67437,67645..67767))	Acanthamoeba castellanii str. Neff	14915083
ACA1_192000	CDS	ACA1_192000	NW_004457364.1	68565	72800	R	encoded by transcript ACA1_192000A; protein kinase domain containing protein	complement(join(68565..68789,69010..69101,69228..69439,69654..69721,70157..70284,70405..70515,70622..70706,70884..71036,71238..71393,71471..71611,71801..71884,72011..72121,72382..72497,72617..72800))	Acanthamoeba castellanii str. Neff	14915084
ACA1_192010	CDS	ACA1_192010	NW_004457364.1	72967	74315	D	encoded by transcript ACA1_192010A; PCI domain containing protein	join(72967..73010,73111..73257,73431..73702,73984..74315)	Acanthamoeba castellanii str. Neff	14915085
ACA1_192020	CDS	ACA1_192020	NW_004457364.1	74731	77087	D	encoded by transcript ACA1_192020A; cystathionine gammasynthase	join(74731..74755,74852..74976,75183..75264,75418..75623,75857..76032,76169..76388,76566..76667,76743..76837,76940..77087)	Acanthamoeba castellanii str. Neff	14915086
ACA1_192030	CDS	ACA1_192030	NW_004457364.1	77279	82890	R	encoded by transcript ACA1_192030A; ubiquitinactivating enzyme E1 1, putative	complement(join(77279..77423,77559..77816,77947..78092,78277..78441,78581..78702,78867..78989,79115..79505,79594..79923,80016..80249,80346..80483,80638..80706,80898..80954,81076..81225,81453..81550,81700..82030,82146..82280,82411..82485,82546..82568,82731..82890))	Acanthamoeba castellanii str. Neff	14915087
ACA1_192040	CDS	ACA1_192040	NW_004457364.1	83086	83455	D	encoded by transcript ACA1_192040A; uncharacterized protein	join(83086..83090,83135..83215,83317..83455)	Acanthamoeba castellanii str. Neff	14915088
ACA1_192050	CDS	ACA1_192050	NW_004457364.1	83823	86274	R	encoded by transcript ACA1_192050A; multiple WD domain, Gbeta repeat domain containing protein	complement(join(83823..83884,84024..84237,84332..84568,84711..84829,84959..85033,85130..85265,85350..85596,85781..86092,86168..86220,86254..86274))	Acanthamoeba castellanii str. Neff	14915065
ACA1_192060	CDS	ACA1_192060	NW_004457364.1	86455	89828	R	encoded by transcript ACA1_192060A; initiation factor eif4 gamma, middle, putative	complement(join(86455..86559,86657..86770,86897..87128,87255..87452,87596..87777,87869..88049,88164..88291,88383..88490,88599..88706,88799..88909,89038..89199,89355..89828))	Acanthamoeba castellanii str. Neff	14915066
ACA1_192070	CDS	ACA1_192070	NW_004457364.1	90633	95091	D	encoded by transcript ACA1_192070A; uncharacterized protein	join(90633..90689,90788..90892,91055..91222,91539..92072,92189..92333,92469..92878,92992..93487,93585..93730,93814..93937,94060..94908,95039..95091)	Acanthamoeba castellanii str. Neff	14915067
ACA1_192080	CDS	ACA1_192080	NW_004457364.1	95344	96022	R	encoded by transcript ACA1_192080A; uncharacterized protein	complement(join(95344..95652,95728..95810,95959..96022))	Acanthamoeba castellanii str. Neff	14915068
ACA1_192090	CDS	ACA1_192090	NW_004457364.1	96532	100043	R	encoded by transcript ACA1_192090A; RhoGEF domain containing protein	complement(join(96532..96691,96780..97334,97428..97578,97700..97891,98020..98159,98289..98371,98522..98665,98774..98932,99072..99177,99290..99381,99499..99561,99695..99783,99950..100043))	Acanthamoeba castellanii str. Neff	14915069
ACA1_192100	CDS	ACA1_192100	NW_004457364.1	100489	101280	D	encoded by transcript ACA1_192100A; mitochondrial ribosomal protein l51 / s25 / cib8 domain containing protein	join(100489..100574,100653..100759,100937..101031,101203..101280)	Acanthamoeba castellanii str. Neff	14915070
ACA1_192110	CDS	ACA1_192110	NW_004457364.1	101865	104655	D	encoded by transcript ACA1_192110A; uncharacterized protein	join(101865..102401,102466..102657,102820..104655)	Acanthamoeba castellanii str. Neff	14915071
ACA1_192120	CDS	ACA1_192120	NW_004457364.1	104767	110484	R	encoded by transcript ACA1_192120A; K+ channel tetramerization subfamily protein	complement(join(104767..105013,105108..105285,105393..105601,105706..105846,105983..106079,106199..106361,106487..106615,106729..106826,106910..107010,107147..107970,108225..108352,108486..108709,108822..109617,110397..110484))	Acanthamoeba castellanii str. Neff	14915072
ACA1_192330	CDS	ACA1_192330	NW_004457364.1	111859	118247	R	encoded by transcript ACA1_192330A; ABC2 type transporter superfamily protein	complement(join(111859..112092,112164..112452,112538..112676,112784..113066,113195..113483,113574..113649,113726..113876,113987..114184,114276..114473,114573..114737,114749..114789,114863..115177,115329..115503,115607..115717,115790..115915,115993..116299,116385..116452,116519..116760,116852..117065,117156..117430,117500..117649,117777..118077,118176..118247))	Acanthamoeba castellanii str. Neff	14915073
ACA1_192340	CDS	ACA1_192340	NW_004457364.1	121553	125860	D	encoded by transcript ACA1_192340A; HECTdomain (ubiquitin-transferase) domain containing protein	join(121553..121993,122085..122193,122358..122468,122563..122664,122763..122869,122979..123117,123237..123337,123458..123535,123640..123847,123995..124083,124207..124548,124565..124614,124695..124848,124929..125107,125181..125256,125375..125632,125720..125860)	Acanthamoeba castellanii str. Neff	14915074
ACA1_192350	CDS	ACA1_192350	NW_004457364.1	126076	127747	R	encoded by transcript ACA1_192350A; methyltransferase domain containing protein	complement(join(126076..126271,126394..126559,126653..126929,127181..127351,127715..127747))	Acanthamoeba castellanii str. Neff	14915075
ACA1_192360	CDS	ACA1_192360	NW_004457364.1	127844	128531	D	encoded by transcript ACA1_192360A; uncharacterized protein	join(127844..127917,128041..128129,128218..128275,128372..128531)	Acanthamoeba castellanii str. Neff	14915051
ACA1_192370	CDS	ACA1_192370	NW_004457364.1	128737	130889	R	encoded by transcript ACA1_192370A; OTUlike cysteine protease domain containing protein	complement(join(128737..129032,129110..129266,129369..129530,129606..129668,129762..129850,130196..130322,130528..130596,130752..130889))	Acanthamoeba castellanii str. Neff	14915052
ACA1_192580	CDS	ACA1_192580	NW_004457364.1	131359	134518	D	encoded by transcript ACA1_192580A; Fbox domain containing protein	join(131359..131966,132000..132445,132623..132696,132834..132944,133058..133222,133294..133375,133454..133622,133748..133881,134025..134518)	Acanthamoeba castellanii str. Neff	14915053
ACA1_192600	CDS	ACA1_192600	NW_004457364.1	136765	137838	R	encoded by transcript ACA1_192600A; ganglioside gm2 activator precursor, putative	complement(join(136765..136851,136941..137043,137135..137232,137338..137402,137489..137587,137676..137838))	Acanthamoeba castellanii str. Neff	14915055
ACA1_192610	CDS	ACA1_192610	NW_004457364.1	138852	139661	D	encoded by transcript ACA1_192610A; Hypothetical protein	join(138852..138912,139009..139148,139319..139452,139595..139661)	Acanthamoeba castellanii str. Neff	14915056
ACA1_192620	CDS	ACA1_192620	NW_004457364.1	139856	140068	R	encoded by transcript ACA1_192620A; uncharacterized protein	complement(139856..140068)	Acanthamoeba castellanii str. Neff	14915057
ACA1_192630	CDS	ACA1_192630	NW_004457364.1	141773	142132	R	encoded by transcript ACA1_192630A; uncharacterized protein	complement(141773..142132)	Acanthamoeba castellanii str. Neff	14915058
ACA1_192660	CDS	ACA1_192660	NW_004457364.1	148131	150806	D	encoded by transcript ACA1_192660A; periplasmic phosphate binding protein, putative	join(148131..148227,148326..148406,148487..148671,148840..148908,148988..149069,149143..149272,149391..149551,149663..149775,149906..150021,150144..150279,150350..150478,150558..150806)	Acanthamoeba castellanii str. Neff	14915061
ACA1_192670	CDS	ACA1_192670	NW_004457364.1	151160	154084	D	encoded by transcript ACA1_192670A; Fbox domain containing protein	join(151160..151205,151291..151408,151511..151620,151752..151816,151903..151964,152075..152213,152570..152699,152784..153023,153146..153215,153243..153312,153433..153524,153627..153693,153824..154084)	Acanthamoeba castellanii str. Neff	14915062
ACA1_192680	CDS	ACA1_192680	NW_004457364.1	154257	156144	R	encoded by transcript ACA1_192680A; translation initiation factor eif2b subunit beta, putative	complement(join(154257..154329,154455..154654,154733..154920,155044..155125,155265..155533,155635..155827,156040..156144))	Acanthamoeba castellanii str. Neff	14915063
ACA1_192690	CDS	ACA1_192690	NW_004457364.1	156143	157807	D	encoded by transcript ACA1_192690A; RNA recognition motif domain containing protein	join(156143..156158,156509..156579,156622..156774,156863..157057,157171..157611,157751..157807)	Acanthamoeba castellanii str. Neff	14915064
ACA1_192700	CDS	ACA1_192700	NW_004457364.1	157988	160746	D	encoded by transcript ACA1_192700A; glycerol kinase	join(157988..158274,158437..158621,158805..159028,159124..159233,159324..159426,159544..159689,159792..159913,160013..160091,160186..160391,160529..160746)	Acanthamoeba castellanii str. Neff	14915111
ACA1_192710	CDS	ACA1_192710	NW_004457364.1	161355	164256	D	encoded by transcript ACA1_192710A; ATPase/histidine kinase/DNA gyrase B/HSP90 domain containing protein	join(161355..161988,162104..162286,162376..162477,162541..162684,162785..162854,162927..163101,163240..163367,163451..163655,163730..163826,163908..164008,164113..164256)	Acanthamoeba castellanii str. Neff	14915110
ACA1_192720	CDS	ACA1_192720	NW_004457364.1	164980	166068	R	encoded by transcript ACA1_192720A; ankyrin repeat-containing protein	complement(join(164980..165506,165636..165836,165942..166068))	Acanthamoeba castellanii str. Neff	14915112
ACA1_192830	CDS	ACA1_192830	NW_004457364.1	166442	167033	D	encoded by transcript ACA1_192830A; RNA recognition motif domain containing protein	join(<166442..166510,166553..166705,166839..>167033)	Acanthamoeba castellanii str. Neff	14915113
ACA1_192940	CDS	ACA1_192940	NW_004457364.1	169112	170544	R	encoded by transcript ACA1_192940A; actin subfamily protein	complement(join(169112..169486,169579..169811,169901..169996,170073..170197,170273..170544))	Acanthamoeba castellanii str. Neff	14915114
ACA1_192950	CDS	ACA1_192950	NW_004457364.1	170680	171052	R	encoded by transcript ACA1_192950A; uncharacterized protein	complement(join(170680..170829,170853..171009,171042..171052))	Acanthamoeba castellanii str. Neff	14915115
ACA1_192960	CDS	ACA1_192960	NW_004457364.1	171289	173545	R	encoded by transcript ACA1_192960A; multiple Ankyrin repeat domain containing protein	complement(join(171289..171818,171947..172147,172250..172383,172481..172629,172758..172886,173168..173545))	Acanthamoeba castellanii str. Neff	14915116
ACA1_192970	CDS	ACA1_192970	NW_004457364.1	173660	174616	R	encoded by transcript ACA1_192970A; basic helixloop-helix (bHLH) family protein	complement(join(173660..173824,173908..174036,174173..174235,174301..174409,174522..174616))	Acanthamoeba castellanii str. Neff	14915117
ACA1_192980	CDS	ACA1_192980	NW_004457364.1	174762	175872	R	encoded by transcript ACA1_192980A; uncharacterized protein	complement(join(174762..175352,175462..175872))	Acanthamoeba castellanii str. Neff	14915118
ACA1_192990	CDS	ACA1_192990	NW_004457364.1	176209	182098	R	encoded by transcript ACA1_192990A; leucine rich repeat-containing protein	complement(join(176209..176346,176426..176506,176642..176784,176909..177081,177202..177328,177431..177554,177708..177842,177966..178054,178156..178228,178355..178529,178616..178773,178934..179137,179228..179293,179381..179428,179525..179590,179672..179737,179824..179958,180121..180258,180360..180549,180826..180911,181042..181143,181255..181320,181432..181523,181612..181686,181817..181847,181967..182098))	Acanthamoeba castellanii str. Neff	14915119
ACA1_193100	CDS	ACA1_193100	NW_004457364.1	183312	184870	D	encoded by transcript ACA1_193100A; carrier superfamily protein	join(183312..183326,183483..183561,183715..183860,183957..184039,184152..184290,184406..184559,184665..184725,184831..184870)	Acanthamoeba castellanii str. Neff	14915120
ACA1_193110	CDS	ACA1_193110	NW_004457364.1	185030	186841	R	encoded by transcript ACA1_193110A; uncharacterized protein	complement(join(185030..185314,185483..185617,185693..185835,185925..186002,186115..186202,186291..186475,186611..186698,186809..186841))	Acanthamoeba castellanii str. Neff	14915121
ACA1_193120	CDS	ACA1_193120	NW_004457364.1	190982	192183	D	encoded by transcript ACA1_193120A; uncharacterized protein	join(190982..191124,191253..191333,191440..191511,191652..192183)	Acanthamoeba castellanii str. Neff	14915122
ACA1_193130	CDS	ACA1_193130	NW_004457364.1	192277	194100	R	encoded by transcript ACA1_193130A; Hypothetical protein	complement(join(192277..192351,192442..192521,192603..192717,192795..192862,192959..193111,193221..193343,193452..193543,193642..193754,194008..194100))	Acanthamoeba castellanii str. Neff	14915123
ACA1_193140	CDS	ACA1_193140	NW_004457364.1	194403	196352	D	encoded by transcript ACA1_193140A; metallophosphoesterase	join(194403..194497,194798..194944,195033..195109,195218..195334,195458..195610,195696..195778,195868..195982,196057..196145,196242..196352)	Acanthamoeba castellanii str. Neff	14915124
ACA1_193150	CDS	ACA1_193150	NW_004457364.1	196482	198148	R	encoded by transcript ACA1_193150A; Serine/threonine protein phosphatase	complement(join(196482..196540,196631..196775,196844..197145,197251..197367,197485..197576,197708..197820,197913..197924,197999..198148))	Acanthamoeba castellanii str. Neff	14915125
ACA1_193160	CDS	ACA1_193160	NW_004457364.1	198720	202835	R	encoded by transcript ACA1_193160A; RasGEF domain containing protein	complement(join(198720..199049,199063..199564,199695..200153,200255..200809,200927..201018,201113..201196,201286..201357,201559..201749,201909..202435,202564..202835))	Acanthamoeba castellanii str. Neff	14915126
ACA1_193170	CDS	ACA1_193170	NW_004457364.1	202972	205470	R	encoded by transcript ACA1_193170A; Peptide-aspartate beta-dioxygenase	complement(join(202972..203669,203782..203962,204222..204307,204454..204511,204655..204819,204899..204994,205100..205181,205313..205470))	Acanthamoeba castellanii str. Neff	14915127
ACA1_193180	CDS	ACA1_193180	NW_004457364.1	205878	207706	D	encoded by transcript ACA1_193180A; serine incorporator 3, putative	join(205878..206023,206118..206163,206278..206513,206608..206836,206930..207220,207289..207506,207583..207706)	Acanthamoeba castellanii str. Neff	14915128
ACA1_193190	CDS	ACA1_193190	NW_004457364.1	207894	208817	R	encoded by transcript ACA1_193190A; uncharacterized protein	complement(join(207894..208023,208091..208172,208252..208345,208463..208556,208672..208817))	Acanthamoeba castellanii str. Neff	14915129
ACA1_193200	CDS	ACA1_193200	NW_004457364.1	209051	209791	D	encoded by transcript ACA1_193200A; uncharacterized protein	join(209051..209291,209400..209503,209582..209791)	Acanthamoeba castellanii str. Neff	14915130
ACA1_193210	CDS	ACA1_193210	NW_004457364.1	209895	210377	R	encoded by transcript ACA1_193210A; polyubiquitin 4 UBQ4, putative	complement(209895..210377)	Acanthamoeba castellanii str. Neff	14915131
ACA1_193220	CDS	ACA1_193220	NW_004457364.1	210772	212264	D	encoded by transcript ACA1_193220A; glycerophosphoryl diester phosphodiesterase family protein	join(210772..210873,211039..211269,211363..211498,211609..211717,211846..212051,212167..212264)	Acanthamoeba castellanii str. Neff	14915132
ACA1_193230	CDS	ACA1_193230	NW_004457364.1	212467	213494	D	encoded by transcript ACA1_193230A; macro domain containing protein	join(212467..212585,212646..212733,212798..212965,213042..213281,213366..213494)	Acanthamoeba castellanii str. Neff	14915133
ACA1_193240	CDS	ACA1_193240	NW_004457364.1	214025	216407	R	encoded by transcript ACA1_193240A; DEAD/DEAH box helicase domain containing protein	complement(join(214025..214293,214422..214527,214695..214836,214966..215104,215225..215367,215532..215745,215848..216006,216167..216407))	Acanthamoeba castellanii str. Neff	14915134
ACA1_193250	CDS	ACA1_193250	NW_004457364.1	216489	218556	R	encoded by transcript ACA1_193250A; WD40 repeat family protein	complement(join(216489..216791,216948..217100,217161..217262,217548..217637,217759..217973,218093..218240,218263..218556))	Acanthamoeba castellanii str. Neff	14915096
ACA1_193260	CDS	ACA1_193260	NW_004457364.1	219027	219882	R	encoded by transcript ACA1_193260A; uncharacterized protein	complement(join(219027..219194,219262..219882))	Acanthamoeba castellanii str. Neff	14915097
ACA1_193270	CDS	ACA1_193270	NW_004457364.1	220143	220788	D	encoded by transcript ACA1_193270A; DnaJ domain containing protein	join(220143..220289,220411..220579,220697..220788)	Acanthamoeba castellanii str. Neff	14915098
ACA1_193280	CDS	ACA1_193280	NW_004457364.1	221115	221880	R	encoded by transcript ACA1_193280A; regulator of g protein signaling domain containing protein	complement(join(221115..221245,221398..221657,221774..221880))	Acanthamoeba castellanii str. Neff	14915099
ACA1_193290	CDS	ACA1_193290	NW_004457364.1	222575	225029	R	encoded by transcript ACA1_193290A; uncharacterized protein	complement(join(222575..222634,222832..222908,222987..223532,223614..223751,223865..224122,224256..224453,224544..224661,224778..224873,224979..225029))	Acanthamoeba castellanii str. Neff	14915100
ACA1_193300	CDS	ACA1_193300	NW_004457364.1	226119	227715	D	encoded by transcript ACA1_193300A; sterol 24c-methyltransferase	join(226119..226619,226742..226919,227178..227342,227438..227572,227645..227715)	Acanthamoeba castellanii str. Neff	14915101
ACA1_193310	CDS	ACA1_193310	NW_004457364.1	229838	230749	D	encoded by transcript ACA1_193310A; polyprotein	<229838..230749	Acanthamoeba castellanii str. Neff	14915102
ACA1_193320	CDS	ACA1_193320	NW_004457364.1	231045	234556	R	encoded by transcript ACA1_193320A; uncharacterized protein	complement(join(231045..231312,231403..231548,231655..231798,231882..232152,232226..232384,232464..232922,232995..233128,233203..233278,233344..233411,233666..233922,233995..234118,234347..234556))	Acanthamoeba castellanii str. Neff	14915103
ACA1_193330	CDS	ACA1_193330	NW_004457364.1	235041	235674	D	encoded by transcript ACA1_193330A; 6,7dimethyl-8-ribityllumazine synthase	join(235041..235407,235487..235674)	Acanthamoeba castellanii str. Neff	14915104
ACA1_193340	CDS	ACA1_193340	NW_004457364.1	235920	236947	D	encoded by transcript ACA1_193340A; Mpv17 / PMP22 family protein	join(235920..236074,236158..236278,236400..236560,236671..236947)	Acanthamoeba castellanii str. Neff	14915105
ACA1_193450	CDS	ACA1_193450	NW_004457364.1	238445	239055	R	encoded by transcript ACA1_193450A; uncharacterized protein	complement(join(238445..238474,238655..238807,238957..239055))	Acanthamoeba castellanii str. Neff	14915106
ACA1_193460	CDS	ACA1_193460	NW_004457364.1	240128	241262	D	encoded by transcript ACA1_193460A; uncharacterized protein	join(240128..240211,240724..240822,240919..241017,241110..241262)	Acanthamoeba castellanii str. Neff	14915107
ACA1_193470	CDS	ACA1_193470	NW_004457364.1	242576	244198	R	encoded by transcript ACA1_193470A; uncharacterized protein	complement(join(242576..243376,243538..243695,243802..244198))	Acanthamoeba castellanii str. Neff	14915108
ACA1_193480	CDS	ACA1_193480	NW_004457364.1	246685	246831	D	encoded by transcript ACA1_193480A; uncharacterized protein	246685..246831	Acanthamoeba castellanii str. Neff	14915109
ACA1_193490	CDS	ACA1_193490	NW_004457364.1	247178	247732	R	encoded by transcript ACA1_193490A; polyprotein	complement(join(247178..247234,247355..247732))	Acanthamoeba castellanii str. Neff	14915039
ACA1_193500	CDS	ACA1_193500	NW_004457364.1	247742	248044	R	encoded by transcript ACA1_193500A; Retrovirusrelated Pol polyprotein from transposon TNT 1-94, putative	complement(join(247742..247885,247901..248044))	Acanthamoeba castellanii str. Neff	14915040
ACA1_193510	CDS	ACA1_193510	NW_004457364.1	248894	249580	R	encoded by transcript ACA1_193510A; uncharacterized protein	complement(248894..249580)	Acanthamoeba castellanii str. Neff	14915041
ACA1_193520	CDS	ACA1_193520	NW_004457364.1	249934	251746	R	encoded by transcript ACA1_193520A; uncharacterized protein	complement(join(249934..250264,250387..250499,250570..250659,250762..250857,250977..251088,251241..251307,251372..251465,251568..251616,251688..251746))	Acanthamoeba castellanii str. Neff	14915042
ACA1_193530	CDS	ACA1_193530	NW_004457364.1	252170	253997	D	encoded by transcript ACA1_193530A; RNA recognition motif domain containing protein	join(252170..252495,252617..252700,252791..252865,252945..253047,253385..253770,253865..253997)	Acanthamoeba castellanii str. Neff	14915043
ACA1_193640	CDS	ACA1_193640	NW_004457364.1	254095	255079	R	encoded by transcript ACA1_193640A; uncharacterized protein	complement(join(254095..254468,254584..255079))	Acanthamoeba castellanii str. Neff	14915044
ACA1_193650	CDS	ACA1_193650	NW_004457364.1	256301	257128	D	encoded by transcript ACA1_193650A; uncharacterized protein	256301..257128	Acanthamoeba castellanii str. Neff	14915045
ACA1_379610	CDS	ACA1_379610	NW_004457363.1	33	487	D	encoded by transcript ACA1_379610A; uncharacterized protein	join(<33..251,329..487)	Acanthamoeba castellanii str. Neff	14914961
ACA1_379620	CDS	ACA1_379620	NW_004457363.1	1027	1887	D	encoded by transcript ACA1_379620A; GATA zinc finger domain containing protein	join(1027..1466,1701..1887)	Acanthamoeba castellanii str. Neff	14914974
ACA1_379630	CDS	ACA1_379630	NW_004457363.1	1989	11989	R	encoded by transcript ACA1_379630A; Fbox domain containing protein	complement(join(1989..2108,2228..2591,2718..3016,3099..3215,3331..3412,3495..3549,3653..3754,4133..4228,4328..4465,4559..4672,4810..4906,4980..5048,5168..5301,5387..5614,5691..5825,5933..6734,7100..7348,7437..7553,7671..7720,8667..8804,8905..9018,9177..9273,9404..9472,9648..9781,9860..10041,10119..10269,10380..11173,11278..11398,11507..11567,11663..11989))	Acanthamoeba castellanii str. Neff	14914975
ACA1_379840	CDS	ACA1_379840	NW_004457363.1	12143	13937	R	encoded by transcript ACA1_379840A; Ser/Thr protein phosphatase superfamily	complement(join(12143..12298,12369..12512,12600..12646,12724..12823,12965..13043,13085..13192,13266..13310,13372..13423,13516..13563,13650..13690,13767..13836,13916..13937))	Acanthamoeba castellanii str. Neff	14914976
ACA1_379850	CDS	ACA1_379850	NW_004457363.1	14764	15834	R	encoded by transcript ACA1_379850A; isochorismatase domain containing protein 2, mitochondrial, putative	complement(join(14764..14820,14892..15065,15212..15456,15571..15643,15706..15834))	Acanthamoeba castellanii str. Neff	14914982
ACA1_379860	CDS	ACA1_379860	NW_004457363.1	17845	19525	R	encoded by transcript ACA1_379860A; Cdc20, putative	complement(join(17845..17866,18430..18859,18952..19525))	Acanthamoeba castellanii str. Neff	14914983
ACA1_379970	CDS	ACA1_379970	NW_004457363.1	19869	21160	R	encoded by transcript ACA1_379970A; glycosyl hydrolase family 10 protein	complement(join(19869..20369,20501..20772,20917..21160))	Acanthamoeba castellanii str. Neff	14914984
ACA1_379980	CDS	ACA1_379980	NW_004457363.1	21846	23825	D	encoded by transcript ACA1_379980A; SH3 domain containing protein	join(21846..22217,22383..22774,22897..23365,23439..23825)	Acanthamoeba castellanii str. Neff	14914985
ACA1_380210	CDS	ACA1_380210	NW_004457363.1	31880	32936	R	encoded by transcript ACA1_380210A; exodeoxyribonuclease III, putative	complement(join(31880..32050,32186..32261,32347..32497,32567..32625,32719..32936))	Acanthamoeba castellanii str. Neff	14914988
ACA1_380220	CDS	ACA1_380220	NW_004457363.1	33504	34953	D	encoded by transcript ACA1_380220A; WD domain, G-beta repeat-containing protein	join(33504..34092,34397..34953)	Acanthamoeba castellanii str. Neff	14914989
ACA1_380330	CDS	ACA1_380330	NW_004457363.1	38277	39756	D	encoded by transcript ACA1_380330A; uncharacterized protein	join(38277..38705,38806..39756)	Acanthamoeba castellanii str. Neff	14914990
ACA1_380340	CDS	ACA1_380340	NW_004457363.1	39833	41507	R	encoded by transcript ACA1_380340A; leucine rich repeat-containing protein	complement(join(39833..40238,40257..40281,40402..40533,40670..40874,40993..41224,41302..>41507))	Acanthamoeba castellanii str. Neff	14914962
ACA1_380350	CDS	ACA1_380350	NW_004457363.1	41770	47864	D	encoded by transcript ACA1_380350A; uncharacterized protein	join(41770..42165,42552..42807,42973..43067,43148..43172,43253..43342,43448..43586,43692..43829,43959..44106,44226..44355,44454..44565,44705..44806,44900..45070,45236..45353,45484..45558,45694..45752,45949..46037,46143..46226,46328..46445,46509..46674,46838..46943,47068..47164,47300..47360,47498..47630,47746..47864)	Acanthamoeba castellanii str. Neff	14914963
ACA1_380460	CDS	ACA1_380460	NW_004457363.1	47937	48463	R	encoded by transcript ACA1_380460A; uncharacterized protein	complement(join(47937..48186,48297..48463))	Acanthamoeba castellanii str. Neff	14914964
ACA1_380570	CDS	ACA1_380570	NW_004457363.1	49043	54626	R	encoded by transcript ACA1_380570A; TBC domain containing protein	complement(join(49043..49134,49258..49507,49532..50316,50425..50524,50887..51009,51167..51264,51428..51533,51633..51731,51870..52010,52140..52724,52868..52946,53010..53163,53278..53864,53988..54090,54225..54388,54541..54626))	Acanthamoeba castellanii str. Neff	14914965
ACA1_380580	CDS	ACA1_380580	NW_004457363.1	55135	55964	R	encoded by transcript ACA1_380580A; Tim17/Tim22/Tim23 family protein	complement(join(55135..55253,55384..55638,55733..55964))	Acanthamoeba castellanii str. Neff	14914966
ACA1_380600	CDS	ACA1_380600	NW_004457363.1	58445	59894	R	encoded by transcript ACA1_380600A; uncharacterized protein	complement(join(58445..59042,59152..59894))	Acanthamoeba castellanii str. Neff	14914968
ACA1_380610	CDS	ACA1_380610	NW_004457363.1	61367	63067	R	encoded by transcript ACA1_380610A; uncharacterized protein	complement(join(61367..62698,62711..63067))	Acanthamoeba castellanii str. Neff	14914969
ACA1_380620	CDS	ACA1_380620	NW_004457363.1	64842	65569	D	encoded by transcript ACA1_380620A; HEAT repeat domain containing protein	join(64842..64959,65031..65569)	Acanthamoeba castellanii str. Neff	14914970
ACA1_380630	CDS	ACA1_380630	NW_004457363.1	67168	68533	D	encoded by transcript ACA1_380630A; uncharacterized protein	join(67168..67488,67761..67899,67995..68533)	Acanthamoeba castellanii str. Neff	14914971
ACA1_380750	CDS	ACA1_380750	NW_004457363.1	78903	82725	R	encoded by transcript ACA1_380750A; uncharacterized protein	complement(join(78903..79367,79599..79699,79781..80378,80495..80634,80710..80815,80900..81050,81145..81767,81848..82030,82147..82725))	Acanthamoeba castellanii str. Neff	14914973
ACA1_380760	CDS	ACA1_380760	NW_004457363.1	83011	84578	D	encoded by transcript ACA1_380760A; aminotransferase, class V superfamily protein	join(83011..83365,83484..83594,83686..83742,83820..84221,84298..84578)	Acanthamoeba castellanii str. Neff	14914991
ACA1_380770	CDS	ACA1_380770	NW_004457363.1	84943	85855	D	encoded by transcript ACA1_380770A; uncharacterized protein	join(84943..85131,85208..85324,85410..85668,85761..85855)	Acanthamoeba castellanii str. Neff	14914992
ACA1_380780	CDS	ACA1_380780	NW_004457363.1	86030	89303	R	encoded by transcript ACA1_380780A; uncharacterized protein	complement(join(86030..86594,86685..86790,86892..87267,87364..87539,87624..87856,87921..88004,88082..88166,88246..88355,88450..88541,88646..88813,88890..88922,89007..89303))	Acanthamoeba castellanii str. Neff	14914993
ACA1_380790	CDS	ACA1_380790	NW_004457363.1	89564	90975	R	encoded by transcript ACA1_380790A; uncharacterized protein	complement(join(89564..90929,90944..90975))	Acanthamoeba castellanii str. Neff	14914994
ACA1_380800	CDS	ACA1_380800	NW_004457363.1	91511	91942	D	encoded by transcript ACA1_380800A; AP2 complex subunit sigma, putative	91511..91942	Acanthamoeba castellanii str. Neff	14914995
ACA1_380810	CDS	ACA1_380810	NW_004457363.1	92058	92772	R	encoded by transcript ACA1_380810A; uncharacterized protein	complement(join(92058..92263,92340..92486,92592..92772))	Acanthamoeba castellanii str. Neff	14914996
ACA1_380820	CDS	ACA1_380820	NW_004457363.1	93312	94549	D	encoded by transcript ACA1_380820A; tRNA binding domain containing protein	join(93312..93336,93405..93466,93536..93736,93812..93901,93959..94042,94112..94224,94299..94393,94458..94549)	Acanthamoeba castellanii str. Neff	14914997
ACA1_380830	CDS	ACA1_380830	NW_004457363.1	95059	96431	D	encoded by transcript ACA1_380830A; uncharacterized protein	join(95059..95179,95289..95403,95481..95739,95754..96431)	Acanthamoeba castellanii str. Neff	14914998
ACA1_380840	CDS	ACA1_380840	NW_004457363.1	96764	99029	D	encoded by transcript ACA1_380840A; uncharacterized protein	join(96764..97213,97329..97431,97577..98007,98110..98192,98335..98783,98866..99029)	Acanthamoeba castellanii str. Neff	14914999
ACA1_380850	CDS	ACA1_380850	NW_004457363.1	99479	100995	R	encoded by transcript ACA1_380850A; GRAM domain containing protein	complement(join(99479..100342,100474..100572,100710..100822,100929..100995))	Acanthamoeba castellanii str. Neff	14915000
ACA1_380860	CDS	ACA1_380860	NW_004457363.1	101271	102611	D	encoded by transcript ACA1_380860A; pantoate-beta-alanine ligase	join(101271..101453,101530..101592,101624..101828,101941..102077,102190..102299,102404..102611)	Acanthamoeba castellanii str. Neff	14915001
ACA1_380870	CDS	ACA1_380870	NW_004457363.1	102813	105034	D	encoded by transcript ACA1_380870A; transporter, major facilitator subfamily protein	join(102813..103171,103254..103329,103488..103628,103767..104150,104270..104372,104448..104738,104814..105034)	Acanthamoeba castellanii str. Neff	14915002
ACA1_380880	CDS	ACA1_380880	NW_004457363.1	105165	106485	R	encoded by transcript ACA1_380880A; uncharacterized protein	complement(join(105165..105665,105677..106055,106154..106268,106359..106485))	Acanthamoeba castellanii str. Neff	14915003
ACA1_380890	CDS	ACA1_380890	NW_004457363.1	107264	112592	R	encoded by transcript ACA1_380890A; RUN domain containing protein	complement(join(107264..108101,108180..108300,108386..108487,108571..108714,108777..108912,108997..109164,109232..109346,109440..110814,110829..111728,111859..112233,112370..112592))	Acanthamoeba castellanii str. Neff	14915028
ACA1_380900	CDS	ACA1_380900	NW_004457363.1	113037	114230	D	encoded by transcript ACA1_380900A; uncharacterized protein	join(113037..113151,113234..113318,113387..114230)	Acanthamoeba castellanii str. Neff	14915029
ACA1_380910	CDS	ACA1_380910	NW_004457363.1	114362	116283	D	encoded by transcript ACA1_380910A; phospholipase a2, putative	join(114362..114465,114515..114542,114717..114932,114992..115068,115157..115235,115332..115406,115477..115560,115635..115748,115825..115927,116008..116101,116190..116283)	Acanthamoeba castellanii str. Neff	14915030
ACA1_380920	CDS	ACA1_380920	NW_004457363.1	116497	117053	D	encoded by transcript ACA1_380920A; SAP domain containing protein	join(116497..116574,116613..117053)	Acanthamoeba castellanii str. Neff	14915031
ACA1_380930	CDS	ACA1_380930	NW_004457363.1	117206	119230	R	encoded by transcript ACA1_380930A; uncharacterized protein	complement(join(117206..117716,117849..118027,118125..118345,118451..118625,118697..118788,118864..119230))	Acanthamoeba castellanii str. Neff	14915032
ACA1_380940	CDS	ACA1_380940	NW_004457363.1	121464	122210	D	encoded by transcript ACA1_380940A; uncharacterized protein	121464..122210	Acanthamoeba castellanii str. Neff	14915033
ACA1_380950	CDS	ACA1_380950	NW_004457363.1	122696	124794	D	encoded by transcript ACA1_380950A; alcohol dehydrogenase, zinccontaining, putative	join(122696..122812,122935..122999,123084..123141,123217..123265,123363..123457,123572..123668,123762..123812,123918..124115,124197..124253,124328..124414,124510..124617,124724..124794)	Acanthamoeba castellanii str. Neff	14915034
ACA1_380960	CDS	ACA1_380960	NW_004457363.1	124916	128376	R	encoded by transcript ACA1_380960A; uncharacterized protein	complement(join(124916..125199,125412..125466,125526..125677,125749..125865,126014..126211,126310..126373,126493..126581,126694..126791,126916..126993,127127..128376))	Acanthamoeba castellanii str. Neff	14915035
ACA1_380970	CDS	ACA1_380970	NW_004457363.1	129028	134153	D	encoded by transcript ACA1_380970A; ankyrin repeat-containing protein	join(129028..129728,129851..130020,130099..130324,130508..131255,131429..131524,131634..131841,131932..132603,132689..132951,133039..133254,133386..133479,133597..133758,133867..134153)	Acanthamoeba castellanii str. Neff	14915036
ACA1_380980	CDS	ACA1_380980	NW_004457363.1	134317	142796	R	encoded by transcript ACA1_380980A; phosphoinositide 3kinase family, accessory domain (pik domain) domain containing protein	complement(join(134317..134511,134658..134767,134899..135001,135118..135161,135278..135334,135422..135494,135622..135634,135716..135800,135917..136028,136161..136215,136295..136359,136495..136614,136796..136884,136960..137035,137122..137184,137311..137415,137508..137590,137679..137750,137865..137966,138072..138231,138293..138393,138469..138572,138652..138773,138871..139030,139105..139189,139284..139365,139497..139613,139801..140079,140402..140560,140654..141253,141533..141627,141705..141856,141956..142065,142164..142235,142386..142451,142551..142580,142767..142796))	Acanthamoeba castellanii str. Neff	14915037
ACA1_381090	CDS	ACA1_381090	NW_004457363.1	143329	144198	R	encoded by transcript ACA1_381090A; uncharacterized protein	complement(143329..144198)	Acanthamoeba castellanii str. Neff	14915038
ACA1_381100	CDS	ACA1_381100	NW_004457363.1	144554	145392	D	encoded by transcript ACA1_381100A; uncharacterized protein	join(144554..144628,144685..144775,144815..145073,145164..145189,145235..145392)	Acanthamoeba castellanii str. Neff	14915004
ACA1_381110	CDS	ACA1_381110	NW_004457363.1	145505	147305	D	encoded by transcript ACA1_381110A; alcohol dehydrogenase GroESlike domain containing protein	join(145505..145564,145702..145903,146097..146242,146350..146408,146505..146638,146712..146813,147112..147305)	Acanthamoeba castellanii str. Neff	14915005
ACA1_381120	CDS	ACA1_381120	NW_004457363.1	147316	148169	D	encoded by transcript ACA1_381120A; maleylacetoacetate isomerase	join(147316..147566,147613..147842,147925..148169)	Acanthamoeba castellanii str. Neff	14915006
ACA1_381230	CDS	ACA1_381230	NW_004457363.1	153181	153935	D	encoded by transcript ACA1_381230A; uncharacterized protein	join(153181..153556,153793..153935)	Acanthamoeba castellanii str. Neff	14915007
ACA1_381240	CDS	ACA1_381240	NW_004457363.1	154545	154874	R	encoded by transcript ACA1_381240A; uncharacterized protein	complement(154545..154874)	Acanthamoeba castellanii str. Neff	14915008
ACA1_381250	CDS	ACA1_381250	NW_004457363.1	155108	156328	D	encoded by transcript ACA1_381250A; uncharacterized protein	join(155108..155526,155616..155676,155801..156328)	Acanthamoeba castellanii str. Neff	14915009
ACA1_381260	CDS	ACA1_381260	NW_004457363.1	156532	157053	R	encoded by transcript ACA1_381260A; uncharacterized protein	complement(join(156532..156899,156981..157053))	Acanthamoeba castellanii str. Neff	14915010
ACA1_381270	CDS	ACA1_381270	NW_004457363.1	157719	158185	D	encoded by transcript ACA1_381270A; uncharacterized protein	join(157719..157851,157932..158185)	Acanthamoeba castellanii str. Neff	14915011
ACA1_381380	CDS	ACA1_381380	NW_004457363.1	159718	160798	D	encoded by transcript ACA1_381380A; NADH dehydrogenase (ubiquinone), putative	join(159718..159823,159917..160070,160166..160206,160431..160798)	Acanthamoeba castellanii str. Neff	14915012
ACA1_381490	CDS	ACA1_381490	NW_004457363.1	160802	163268	R	encoded by transcript ACA1_381490A; Hypothetical protein	complement(join(160802..160894,160975..161153,161164..161201,161309..161429,161539..161614,161698..161751,161862..161954,162058..162081,162178..162275,162355..162413,162688..162816,163010..163148,163226..163268))	Acanthamoeba castellanii str. Neff	14915013
ACA1_381500	CDS	ACA1_381500	NW_004457363.1	163926	164951	R	encoded by transcript ACA1_381500A; uncharacterized protein	complement(163926..164951)	Acanthamoeba castellanii str. Neff	14915014
ACA1_381510	CDS	ACA1_381510	NW_004457363.1	166073	168558	D	encoded by transcript ACA1_381510A; NADH dehydrogenase, putative	join(166073..166178,166270..166423,166518..166558,166648..166732,166811..166920,167024..167057,167140..167333,167512..167682,167753..167822,167919..167975,168044..168193,168309..168558)	Acanthamoeba castellanii str. Neff	14915015
ACA1_381520	CDS	ACA1_381520	NW_004457363.1	168693	171111	D	encoded by transcript ACA1_381520A; WH2 motif domain containing protein	join(168693..168764,168933..169055,169146..169268,169371..169404,169478..169565,169675..169819,169897..169971,170084..170681,170694..170795,170894..170998,171065..171111)	Acanthamoeba castellanii str. Neff	14915016
ACA1_381530	CDS	ACA1_381530	NW_004457363.1	171501	177294	D	encoded by transcript ACA1_381530A; protein kinase domain containing protein	join(171501..173121,173171..173221,173284..173341,173412..173478,173565..173694,173764..173867,173948..174028,174111..174236,174306..174420,174534..174634,174747..174917,175002..175124,175197..175374,175454..175648,175721..175818,175902..175961,176049..176132,176233..176302,176456..176546,176649..176777,176918..177033,177185..177294)	Acanthamoeba castellanii str. Neff	14915017
ACA1_381540	CDS	ACA1_381540	NW_004457363.1	177384	177815	D	encoded by transcript ACA1_381540A; uncharacterized protein	join(177384..177411,177569..177629,177707..177815)	Acanthamoeba castellanii str. Neff	14915018
ACA1_381550	CDS	ACA1_381550	NW_004457363.1	178076	179773	R	encoded by transcript ACA1_381550A; K+ channel tetramerization subfamily protein	complement(join(178076..178116,178430..178656,178720..178863,178946..179118,179199..179393,179487..179678,179744..179773))	Acanthamoeba castellanii str. Neff	14915019
ACA1_381560	CDS	ACA1_381560	NW_004457363.1	180419	180674	R	encoded by transcript ACA1_381560A; uncharacterized protein	complement(join(180419..180509,180538..180674))	Acanthamoeba castellanii str. Neff	14915020
ACA1_381570	CDS	ACA1_381570	NW_004457363.1	181937	184676	D	encoded by transcript ACA1_381570A; GTPaseactivator protein for Ras-like GTPase	join(181937..182113,182223..182388,182508..182841,182932..183103,183196..183636,183713..183849,184002..184138,184205..184324,184416..184501,184560..184676)	Acanthamoeba castellanii str. Neff	14915021
ACA1_381580	CDS	ACA1_381580	NW_004457363.1	185177	186481	D	encoded by transcript ACA1_381580A; uncharacterized protein	join(185177..185322,185413..185614,185700..185778,185822..186079,186137..186226,186309..186481)	Acanthamoeba castellanii str. Neff	14915022
ACA1_381590	CDS	ACA1_381590	NW_004457363.1	186584	190159	D	encoded by transcript ACA1_381590A; Phosphatidylinositol 3 and 4-kinase	join(186584..187049,187161..187266,187360..187425,187514..187599,187701..187872,187943..188153,188257..188800,188889..188969,189041..189131,189365..189551,189630..189888,189978..190159)	Acanthamoeba castellanii str. Neff	14915023
ACA1_381600	CDS	ACA1_381600	NW_004457363.1	190300	194683	D	encoded by transcript ACA1_381600A; golgi family protein, putative	join(190300..190564,190655..190809,190958..191140,191280..191394,191480..191610,191682..191813,191967..192026,192148..192210,192302..192386,192487..192607,192699..192837,192925..193077,193175..193323,193477..193569,193684..193812,193898..193968,194069..194189,194268..194383,194481..194683)	Acanthamoeba castellanii str. Neff	14915024
ACA1_381610	CDS	ACA1_381610	NW_004457363.1	194828	196685	R	encoded by transcript ACA1_381610A; carrier superfamily protein	complement(join(194828..194955,195064..195178,195321..195386,195483..195579,195712..195964,196063..196204,196338..196511,196629..196685))	Acanthamoeba castellanii str. Neff	14915025
ACA1_381620	CDS	ACA1_381620	NW_004457363.1	196913	199270	D	encoded by transcript ACA1_381620A; Aga27A, putative	join(196913..197012,197119..197265,197375..197442,197569..197660,197748..197791,197871..197929,198052..198143,198218..198373,198473..198650,198778..198936,199124..199270)	Acanthamoeba castellanii str. Neff	14915026
ACA1_381640	CDS	ACA1_381640	NW_004457363.1	201171	203266	D	encoded by transcript ACA1_381640A; uncharacterized protein	join(201171..201249,201315..201443,201566..202051,202133..202485,202850..203266)	Acanthamoeba castellanii str. Neff	14914977
ACA1_381750	CDS	ACA1_381750	NW_004457363.1	203307	204914	R	encoded by transcript ACA1_381750A; uncharacterized protein	complement(join(203307..203440,203514..203670,203756..203832,203854..203995,204089..204154,204258..204418,204495..204547,204621..204693,204782..204914))	Acanthamoeba castellanii str. Neff	14914978
ACA1_381860	CDS	ACA1_381860	NW_004457363.1	208660	210002	D	encoded by transcript ACA1_381860A; Znfinger in Ran binding protein and others domain containing protein	join(208660..208869,209651..209756,209857..210002)	Acanthamoeba castellanii str. Neff	14914979
ACA1_381980	CDS	ACA1_381980	NW_004457363.1	210671	210970	D	encoded by transcript ACA1_381980A; uncharacterized protein	join(210671..210782,210867..>210970)	Acanthamoeba castellanii str. Neff	14914981
ACA1_303720	CDS	ACA1_303720	NW_004457362.1	655	1486	R	encoded by transcript ACA1_303720A; leucine rich repeat domain containing protein	complement(join(<655..933,1006..1091,1156..1486))	Acanthamoeba castellanii str. Neff	14914960
ACA1_303730	CDS	ACA1_303730	NW_004457362.1	4466	5595	D	encoded by transcript ACA1_303730A; uncharacterized protein	join(4466..4807,4883..5005,5259..5333,5413..5595)	Acanthamoeba castellanii str. Neff	14914958
ACA1_303740	CDS	ACA1_303740	NW_004457362.1	7657	8536	D	encoded by transcript ACA1_303740A; uncharacterized protein	join(7657..8283,8459..8536)	Acanthamoeba castellanii str. Neff	14914956
ACA1_304050	CDS	ACA1_304050	NW_004457362.1	25449	25926	D	encoded by transcript ACA1_304050A; membrance occupation and recognition nexus protein 1, putative	join(25449..25663,25746..25926)	Acanthamoeba castellanii str. Neff	14914957
ACA1_304060	CDS	ACA1_304060	NW_004457362.1	25948	26805	D	encoded by transcript ACA1_304060A; membrance occupation and recognition nexus protein 1, putative	25948..>26805	Acanthamoeba castellanii str. Neff	14914959
ACA1_344030	CDS	ACA1_344030	NW_004457361.1	6465	11571	R	encoded by transcript ACA1_344030A; uncharacterized protein	complement(join(6465..6672,6918..7146,7224..7350,7441..7491,11322..11340,11420..11571))	Acanthamoeba castellanii str. Neff	14914953
ACA1_344140	CDS	ACA1_344140	NW_004457361.1	12090	12605	R	encoded by transcript ACA1_344140A; uncharacterized protein	complement(12090..12605)	Acanthamoeba castellanii str. Neff	14914955
ACA1_344150	CDS	ACA1_344150	NW_004457361.1	13880	14380	R	encoded by transcript ACA1_344150A; 3ketoacyl-(acyl-carrier-protein) reductase	complement(join(13880..13977,14095..14238,14329..14380))	Acanthamoeba castellanii str. Neff	14914954
ACA1_017740	CDS	ACA1_017740	NW_004457360.1	674	7831	D	encoded by transcript ACA1_017740A; Exonuclease ii, putative	join(674..830,1018..1127,1222..1365,1444..1581,1656..1736,1852..1969,2061..2173,2283..2424,2524..2622,2703..3086,3197..3318,3436..3492,3567..3645,3742..3904,4011..4178,4298..4383,4453..4568,4642..4707,4790..4876,4990..5088,5181..5375,5421..5492,5622..5900,6014..6076,6170..6253,6405..6912,7001..7199,7290..7389,7506..7593,7683..7831)	Acanthamoeba castellanii str. Neff	14914948
ACA1_017750	CDS	ACA1_017750	NW_004457360.1	9615	10598	D	encoded by transcript ACA1_017750A; uncharacterized protein	9615..10598	Acanthamoeba castellanii str. Neff	14914952
ACA1_017760	CDS	ACA1_017760	NW_004457360.1	11160	11473	D	encoded by transcript ACA1_017760A; uncharacterized protein	join(11160..11187,11225..11366,11407..11473)	Acanthamoeba castellanii str. Neff	14914949
ACA1_017770	CDS	ACA1_017770	NW_004457360.1	11646	14403	D	encoded by transcript ACA1_017770A; ABC2 type transporter superfamily protein	join(11646..11720,11813..12415,12507..12600,12669..12914,12999..13382,13451..13537,13626..13768,13860..14025,14093..14403)	Acanthamoeba castellanii str. Neff	14914950
ACA1_017780	CDS	ACA1_017780	NW_004457360.1	14497	14919	R	encoded by transcript ACA1_017780A; uncharacterized protein	complement(14497..14919)	Acanthamoeba castellanii str. Neff	14914951
ACA1_333700	CDS	ACA1_333700	NW_004457359.1	192	632	R	encoded by transcript ACA1_333700A; aminotransferase, putative	complement(<192..632)	Acanthamoeba castellanii str. Neff	14914937
ACA1_333710	CDS	ACA1_333710	NW_004457359.1	2762	3503	R	encoded by transcript ACA1_333710A; uncharacterized protein	complement(join(2762..3033,3118..3229,3303..3503))	Acanthamoeba castellanii str. Neff	14914933
ACA1_333720	CDS	ACA1_333720	NW_004457359.1	3779	4249	D	encoded by transcript ACA1_333720A; uncharacterized protein	join(3779..3802,3902..4249)	Acanthamoeba castellanii str. Neff	14914934
ACA1_333830	CDS	ACA1_333830	NW_004457359.1	6232	6838	R	encoded by transcript ACA1_333830A; phytanoyl-CoA dioxygenase, putative	complement(join(<6232..6415,6451..6550,6656..6838))	Acanthamoeba castellanii str. Neff	14914935
ACA1_333840	CDS	ACA1_333840	NW_004457359.1	7021	10522	D	encoded by transcript ACA1_333840A; DNA 3'phosphatase	join(7021..7059,7484..7930,8037..8223,8319..8500,8574..8632,8756..8885,8983..9102,9180..9306,9397..9525,9586..9710,9859..9987,10077..10154,10251..10291,10387..10522)	Acanthamoeba castellanii str. Neff	14914936
ACA1_333950	CDS	ACA1_333950	NW_004457359.1	12301	14101	D	encoded by transcript ACA1_333950A; MYND finger domain containing protein	join(12301..12582,12625..12734,12795..12938,13059..13080,13153..13229,13308..13422,13458..13535,13609..13724,13794..13867,13956..14101)	Acanthamoeba castellanii str. Neff	14914938
ACA1_333960	CDS	ACA1_333960	NW_004457359.1	14880	16731	D	encoded by transcript ACA1_333960A; uncharacterized protein	join(14880..15040,15196..15515,15563..15648,15765..15844,15946..16296,16378..16586,16679..16731)	Acanthamoeba castellanii str. Neff	14914939
ACA1_334070	CDS	ACA1_334070	NW_004457359.1	17485	19502	D	encoded by transcript ACA1_334070A; uncharacterized protein	join(17485..17604,17731..17816,17935..18148,18276..18404,18513..18594,18727..18824,18943..19111,19196..19271,19379..19502)	Acanthamoeba castellanii str. Neff	14914940
ACA1_334080	CDS	ACA1_334080	NW_004457359.1	19922	20113	R	encoded by transcript ACA1_334080A; uncharacterized protein	complement(19922..20113)	Acanthamoeba castellanii str. Neff	14914941
ACA1_334100	CDS	ACA1_334100	NW_004457359.1	21851	22204	D	encoded by transcript ACA1_334100A; uncharacterized protein	join(21851..22118,22197..22204)	Acanthamoeba castellanii str. Neff	14914943
ACA1_334110	CDS	ACA1_334110	NW_004457359.1	24425	26233	D	encoded by transcript ACA1_334110A; uncharacterized protein	join(24425..24749,24856..25000,25184..25265,25462..25569,25851..25980,26091..26233)	Acanthamoeba castellanii str. Neff	14914944
ACA1_334220	CDS	ACA1_334220	NW_004457359.1	27260	31293	D	encoded by transcript ACA1_334220A; Fbox domain containing protein	join(27260..27347,27485..28347,28424..28483,28551..28661,30033..30091,30199..30337,30443..30504,30603..31293)	Acanthamoeba castellanii str. Neff	14914945
ACA1_334430	CDS	ACA1_334430	NW_004457359.1	32027	32382	D	encoded by transcript ACA1_334430A; SNF, putative	join(32027..32096,32202..32315,32369..32382)	Acanthamoeba castellanii str. Neff	14914946
ACA1_354700	CDS	ACA1_354700	NW_004457358.1	298	1303	R	encoded by transcript ACA1_354700A; uncharacterized protein	complement(join(<298..485,603..693,854..>1303))	Acanthamoeba castellanii str. Neff	14914931
ACA1_354810	CDS	ACA1_354810	NW_004457358.1	8175	8315	D	encoded by transcript ACA1_354810A; uncharacterized protein	8175..>8315	Acanthamoeba castellanii str. Neff	14914929
ACA1_354920	CDS	ACA1_354920	NW_004457358.1	13547	14394	D	encoded by transcript ACA1_354920A; high molecular weight form of myosin1, putative	join(13547..13603,13689..13889,13962..14075,14162..14266,14350..>14394)	Acanthamoeba castellanii str. Neff	14914932
ACA1_355030	CDS	ACA1_355030	NW_004457358.1	19769	20256	D	encoded by transcript ACA1_355030A; uncharacterized protein	join(19769..19949,20048..20256)	Acanthamoeba castellanii str. Neff	14914930
ACA1_101790	CDS	ACA1_101790	NW_004457357.1	45	419	D	encoded by transcript ACA1_101790A; rac-alpha serine/threonine kinase family protein	join(<45..180,265..419)	Acanthamoeba castellanii str. Neff	14914927
ACA1_102100	CDS	ACA1_102100	NW_004457357.1	10030	10424	D	encoded by transcript ACA1_102100A; uncharacterized protein	join(<10030..10158,10305..10424)	Acanthamoeba castellanii str. Neff	14914928
ACA1_102220	CDS	ACA1_102220	NW_004457357.1	18814	19398	D	encoded by transcript ACA1_102220A; EF hand domain containing protein	join(18814..18861,18947..19013,19084..19198,19302..>19398)	Acanthamoeba castellanii str. Neff	14914926
ACA1_105730	CDS	ACA1_105730	NW_004457356.1	157	458	D	encoded by transcript ACA1_105730A; uncharacterized protein	join(157..279,357..458)	Acanthamoeba castellanii str. Neff	14914893
ACA1_105740	CDS	ACA1_105740	NW_004457356.1	1458	4000	D	encoded by transcript ACA1_105740A; Fbox domain containing protein	join(1458..1583,1714..1811,1905..2042,2151..2193,2285..2402,2481..2601,2712..2854,2982..3051,3195..3254,3367..3597,3683..3827,3962..4000)	Acanthamoeba castellanii str. Neff	14914900
ACA1_105750	CDS	ACA1_105750	NW_004457356.1	6319	7064	D	encoded by transcript ACA1_105750A; uncharacterized protein	join(6319..6384,6498..7064)	Acanthamoeba castellanii str. Neff	14914897
ACA1_105760	CDS	ACA1_105760	NW_004457356.1	7317	10798	R	encoded by transcript ACA1_105760A; Proteasome/cyclosome repeat containing protein	complement(join(7317..7411,7482..7715,7795..8077,8147..8243,8278..8509,8601..9119,9189..9356,9429..9568,9647..10027,10105..10232,10376..10597,10691..10798))	Acanthamoeba castellanii str. Neff	14914898
ACA1_105770	CDS	ACA1_105770	NW_004457356.1	11217	16232	D	encoded by transcript ACA1_105770A; uncharacterized protein	join(11217..11334,11428..11582,11732..12857,12942..13123,13206..13327,13436..13603,13715..13826,13963..14101,14236..14390,14476..14549,14647..14719,14798..14878,15034..15141,15282..15353,15437..15479,15602..15706,15815..15927,16035..16232)	Acanthamoeba castellanii str. Neff	14914899
ACA1_105780	CDS	ACA1_105780	NW_004457356.1	16454	18733	R	encoded by transcript ACA1_105780A; protein kinase domain containing protein	complement(join(16454..16599,16698..16906,17029..17137,17229..17514,17660..18394,18480..18556,18688..18733))	Acanthamoeba castellanii str. Neff	14914842
ACA1_105890	CDS	ACA1_105890	NW_004457356.1	21943	24275	D	encoded by transcript ACA1_105890A; protein kinase domain containing protein	join(21943..22041,22128..22297,22372..22609,22704..22727,22854..22941,23047..23174,23267..23435,23556..23808,23853..24135,24225..24275)	Acanthamoeba castellanii str. Neff	14914843
ACA1_105900	CDS	ACA1_105900	NW_004457356.1	24387	25204	R	encoded by transcript ACA1_105900A; deoxyuridine 5'-triphosphate nucleotidohydrolase	complement(join(24387..24460,24557..24619,24704..24823,24926..25017,25107..25204))	Acanthamoeba castellanii str. Neff	14914844
ACA1_105910	CDS	ACA1_105910	NW_004457356.1	25643	28301	R	encoded by transcript ACA1_105910A; RFX DNAbinding domain containing protein	complement(join(25643..25921,26045..27829,27845..27917,28234..28301))	Acanthamoeba castellanii str. Neff	14914845
ACA1_105920	CDS	ACA1_105920	NW_004457356.1	29247	31061	R	encoded by transcript ACA1_105920A; uncharacterized protein	complement(join(29247..29290,29380..29460,29557..29631,29704..29784,29864..29938,30021..30098,30190..30282,30380..30445,30522..30642,30765..30895,30971..31061))	Acanthamoeba castellanii str. Neff	14914846
ACA1_105930	CDS	ACA1_105930	NW_004457356.1	31477	32578	R	encoded by transcript ACA1_105930A; eukaryotic porin protein	complement(join(31477..31816,31959..32578))	Acanthamoeba castellanii str. Neff	14914847
ACA1_105940	CDS	ACA1_105940	NW_004457356.1	32788	35884	D	encoded by transcript ACA1_105940A; ARID/BRIGHT DNA binding domain containing protein	join(32788..32861,32926..33046,33238..33341,33412..33570,33650..33720,33813..33928,33997..35223,35234..35884)	Acanthamoeba castellanii str. Neff	14914848
ACA1_105950	CDS	ACA1_105950	NW_004457356.1	36846	37289	D	encoded by transcript ACA1_105950A; NHL repeat-containing protein	36846..37289	Acanthamoeba castellanii str. Neff	14914849
ACA1_105960	CDS	ACA1_105960	NW_004457356.1	37432	39645	R	encoded by transcript ACA1_105960A; uncharacterized protein	complement(join(37432..37538,37616..37733,37841..37894,37999..38064,38160..38255,38550..38641,38735..38930,39049..39178,39237..39468,39579..39645))	Acanthamoeba castellanii str. Neff	14914850
ACA1_105970	CDS	ACA1_105970	NW_004457356.1	40026	41624	R	encoded by transcript ACA1_105970A; phytanoylCoA dioxygenase family protein	complement(join(40026..40062,40170..40299,40438..40538,40616..40743,40967..40985,41002..41110,41205..41331,41473..41562,41577..>41624))	Acanthamoeba castellanii str. Neff	14914851
ACA1_105980	CDS	ACA1_105980	NW_004457356.1	41915	42296	D	encoded by transcript ACA1_105980A; uncharacterized protein	join(41915..42005,42073..42296)	Acanthamoeba castellanii str. Neff	14914852
ACA1_105990	CDS	ACA1_105990	NW_004457356.1	42364	46664	D	encoded by transcript ACA1_105990A; leucine rich repeat domain containing protein	join(42364..42392,42418..42667,42791..42956,43149..43229,43318..43378,43498..43585,43674..43784,43871..43946,44029..44136,44203..44375,44477..44598,44666..44832,44913..44991,45097..45548,45658..45889,45979..46122,46255..46346,46459..46664)	Acanthamoeba castellanii str. Neff	14914853
ACA1_106000	CDS	ACA1_106000	NW_004457356.1	47068	53922	D	encoded by transcript ACA1_106000A; HEAT repeat domain containing protein	join(47068..47211,47328..47459,47593..47755,47853..48004,48078..48176,48255..48440,48564..48791,48902..48997,49141..49476,49566..49853,49933..50115,50235..50405,50479..50634,50729..50946,51064..51157,51283..51450,51539..51730,51877..52162,52285..52967,53059..53922)	Acanthamoeba castellanii str. Neff	14914854
ACA1_106010	CDS	ACA1_106010	NW_004457356.1	54109	57499	D	encoded by transcript ACA1_106010A; DNA replication licensing factor mcm4, putative	join(54109..54181,54245..54584,54670..55172,55222..55248,55272..55553,55665..55802,55909..56105,56219..56422,56518..56700,56818..57018,57117..57243,57342..57499)	Acanthamoeba castellanii str. Neff	14914874
ACA1_106020	CDS	ACA1_106020	NW_004457356.1	57738	59309	D	encoded by transcript ACA1_106020A; uncharacterized protein	join(57738..58175,58320..58453,58610..58733,58816..58896,58959..59309)	Acanthamoeba castellanii str. Neff	14914875
ACA1_106030	CDS	ACA1_106030	NW_004457356.1	59988	61418	R	encoded by transcript ACA1_106030A; Dual specificity protein kinase	complement(join(59988..60126,60251..60315,60409..60549,60685..60808,60910..61027,61184..>61418))	Acanthamoeba castellanii str. Neff	14914876
ACA1_106140	CDS	ACA1_106140	NW_004457356.1	61602	62370	D	encoded by transcript ACA1_106140A; uncharacterized protein	join(61602..61667,61794..62120,62248..62370)	Acanthamoeba castellanii str. Neff	14914877
ACA1_106150	CDS	ACA1_106150	NW_004457356.1	62751	64942	R	encoded by transcript ACA1_106150A; protein kinase	complement(join(62751..62776,62931..63085,63221..63293,63401..63599,63720..63798,63940..64058,64143..64199,64313..64426,64563..64746,64854..64942))	Acanthamoeba castellanii str. Neff	14914878
ACA1_106260	CDS	ACA1_106260	NW_004457356.1	65382	66524	R	encoded by transcript ACA1_106260A; uncharacterized protein	complement(join(65382..65525,65607..65728,65847..65934,66067..66235,66316..66524))	Acanthamoeba castellanii str. Neff	14914879
ACA1_106270	CDS	ACA1_106270	NW_004457356.1	66648	67858	R	encoded by transcript ACA1_106270A; cation efflux family superfamily protein	complement(join(66648..67052,67127..67312,67408..67485,67558..67639,67680..67717,67766..67858))	Acanthamoeba castellanii str. Neff	14914880
ACA1_106280	CDS	ACA1_106280	NW_004457356.1	68632	69362	R	encoded by transcript ACA1_106280A; uncharacterized protein	complement(join(68632..68670,68789..68813,68941..69101,69112..69214,69286..69362))	Acanthamoeba castellanii str. Neff	14914881
ACA1_106290	CDS	ACA1_106290	NW_004457356.1	69499	77804	D	encoded by transcript ACA1_106290A; WD domain, Gbeta repeat containing protein	join(69499..69522,69659..69778,69894..69956,70041..70274,70395..70501,70604..70735,70746..70840,70965..71089,71202..71813,71982..72161,72260..72437,72510..73098,73194..73833,73882..74037,74124..74370,74459..74879,74963..75232,75360..76266,76306..76341,76494..76595,76710..76899,76972..77063,77079..77804)	Acanthamoeba castellanii str. Neff	14914882
ACA1_106300	CDS	ACA1_106300	NW_004457356.1	78059	82433	D	encoded by transcript ACA1_106300A; phosphoribosylaminoimidazole carboxylase, ATPase subunit	join(78059..78190,78483..78604,78759..78847,78963..79037,79166..79296,79436..79571,79671..79976,80062..80137,80265..80397,80518..80710,80808..80933,81036..81095,81179..81249,81277..81330,81430..81856,81964..82053,82174..82433)	Acanthamoeba castellanii str. Neff	14914883
ACA1_106310	CDS	ACA1_106310	NW_004457356.1	82706	83238	D	encoded by transcript ACA1_106310A; uncharacterized protein	join(82706..82954,83194..83238)	Acanthamoeba castellanii str. Neff	14914884
ACA1_106320	CDS	ACA1_106320	NW_004457356.1	83482	85154	D	encoded by transcript ACA1_106320A; uncharacterized protein	join(83482..83973,84016..84473,84596..84647,84705..85154)	Acanthamoeba castellanii str. Neff	14914885
ACA1_106330	CDS	ACA1_106330	NW_004457356.1	85327	88340	R	encoded by transcript ACA1_106330A; uncharacterized protein	complement(join(85327..85538,85650..85756,85837..85979,86150..86277,86364..86439,86552..86649,86748..86918,87072..87229,87414..87750,87870..88070,88154..88340))	Acanthamoeba castellanii str. Neff	14914886
ACA1_106340	CDS	ACA1_106340	NW_004457356.1	88919	90536	R	encoded by transcript ACA1_106340A; Myblike DNA-binding domain containing protein	complement(join(88919..89083,89165..89360,89484..89926,90029..90203,90328..90536))	Acanthamoeba castellanii str. Neff	14914887
ACA1_106350	CDS	ACA1_106350	NW_004457356.1	90642	93476	D	encoded by transcript ACA1_106350A; Fbox domain containing protein	join(90642..90669,90766..90836,90882..91121,91157..91207,91243..91302,91397..91515,91619..91676,91784..92202,92328..92513,92533..92597,92692..92744,92873..93199,93363..93476)	Acanthamoeba castellanii str. Neff	14914888
ACA1_106360	CDS	ACA1_106360	NW_004457356.1	92957	93575	R	encoded by transcript ACA1_106360A; uncharacterized protein	complement(join(<92957..93218,93346..93575))	Acanthamoeba castellanii str. Neff	14914889
ACA1_106370	CDS	ACA1_106370	NW_004457356.1	93743	95627	D	encoded by transcript ACA1_106370A; glyoxylate reductase	join(93743..94108,94172..94239,94441..94497,94572..94672,94793..94835,94906..94968,95067..95232,95351..95447,95482..95627)	Acanthamoeba castellanii str. Neff	14914890
ACA1_106380	CDS	ACA1_106380	NW_004457356.1	95899	97616	D	encoded by transcript ACA1_106380A; uncharacterized protein	join(95899..96022,96127..96213,96305..96387,96475..96615,96733..96804,96933..97062,97230..97525,97593..97616)	Acanthamoeba castellanii str. Neff	14914891
ACA1_106590	CDS	ACA1_106590	NW_004457356.1	98779	100216	D	encoded by transcript ACA1_106590A; uncharacterized protein	join(98779..98902,99035..99176,99271..99453,99562..99722,100020..100216)	Acanthamoeba castellanii str. Neff	14914892
ACA1_106600	CDS	ACA1_106600	NW_004457356.1	100497	106098	R	encoded by transcript ACA1_106600A; Kelch repeat containing MAP kinase	complement(join(100497..100537,100627..100772,100917..101006,101137..101219,101630..101765,101917..102009,102270..102358,102744..102827,102946..103056,103144..103308,103428..103582,103798..103864,104054..104332,104565..104656,104780..104967,105096..105190,105376..105756,105916..106098))	Acanthamoeba castellanii str. Neff	14914913
ACA1_106710	CDS	ACA1_106710	NW_004457356.1	106242	108655	D	encoded by transcript ACA1_106710A; tetratricopeptide repeat domain containing protein	join(106242..106318,106450..106517,106630..106714,106945..107074,107205..107322,107458..107503,107627..107797,107959..108088,108232..108374,108550..108655)	Acanthamoeba castellanii str. Neff	14914914
ACA1_106720	CDS	ACA1_106720	NW_004457356.1	108979	111237	R	encoded by transcript ACA1_106720A; regulation of nuclear premRNA domain containing 1B, putative	complement(join(108979..109021,109194..109333,109670..109896,110062..110239,110432..110588,110734..110842,110957..111034,111165..111237))	Acanthamoeba castellanii str. Neff	14914915
ACA1_106730	CDS	ACA1_106730	NW_004457356.1	111635	112167	D	encoded by transcript ACA1_106730A; Ser/Thr phosphatase family protein, putative	join(111635..111998,112109..112167)	Acanthamoeba castellanii str. Neff	14914916
ACA1_106740	CDS	ACA1_106740	NW_004457356.1	112377	113459	D	encoded by transcript ACA1_106740A; proteasome 26S subunit, putative	join(112377..112566,112693..112770,112798..112971,113124..113292,113429..113459)	Acanthamoeba castellanii str. Neff	14914917
ACA1_106750	CDS	ACA1_106750	NW_004457356.1	113726	116586	D	encoded by transcript ACA1_106750A; ubiquinone biosynthesis protein AarF family protein, putative	join(113726..113857,114182..114350,114536..114724,114869..114925,114981..115059,115234..115395,115552..115601,115707..115907,115996..116073,116185..116343,116441..116586)	Acanthamoeba castellanii str. Neff	14914918
ACA1_106760	CDS	ACA1_106760	NW_004457356.1	116766	118087	R	encoded by transcript ACA1_106760A; DNAdirected DNA polymerase subunit, putative	complement(join(116766..116951,117047..117194,117289..117410,117493..117678,117875..117973,118058..118087))	Acanthamoeba castellanii str. Neff	14914919
ACA1_106770	CDS	ACA1_106770	NW_004457356.1	118329	118880	R	encoded by transcript ACA1_106770A; uncharacterized protein	complement(join(118329..118404,118435..118880))	Acanthamoeba castellanii str. Neff	14914920
ACA1_106780	CDS	ACA1_106780	NW_004457356.1	125094	127531	R	encoded by transcript ACA1_106780A; exoribonuclease II	complement(join(125094..125230,125328..125462,125560..125626,125701..125796,125883..125990,126135..126225,126316..126376,126465..126562,126679..126780,126896..126942,127068..127222,127408..127531))	Acanthamoeba castellanii str. Neff	14914921
ACA1_106790	CDS	ACA1_106790	NW_004457356.1	128241	128656	R	encoded by transcript ACA1_106790A; uncharacterized protein	complement(join(128241..128426,128558..128656))	Acanthamoeba castellanii str. Neff	14914922
ACA1_106800	CDS	ACA1_106800	NW_004457356.1	129327	135235	D	encoded by transcript ACA1_106800A; EF hand domain containing protein	join(129327..129435,129503..129626,129794..129869,129963..130064,130317..130471,130568..130682,130855..131037,131179..131376,131531..131857,132039..132160,132280..132481,132636..132767,132881..133024,133131..133256,133426..133536,133693..134113,134218..134310,134399..134472,134540..134623,134708..134786,134867..134991,135098..135235)	Acanthamoeba castellanii str. Neff	14914923
ACA1_106810	CDS	ACA1_106810	NW_004457356.1	135376	139219	R	encoded by transcript ACA1_106810A; FHA domain containing protein	complement(join(135376..135529,135616..135709,135787..135862,136004..136043,136153..136273,136779..136828,136862..137022,137140..137253,137470..137557,137645..137693,137844..137952,138124..138413,138523..138594,138724..138760,138895..139030,139149..139219))	Acanthamoeba castellanii str. Neff	14914924
ACA1_106820	CDS	ACA1_106820	NW_004457356.1	139572	141932	R	encoded by transcript ACA1_106820A; ATPase, AAA domain containing protein	complement(join(139572..139634,139794..139958,140114..140331,140545..140689,140834..140992,141149..141204,141303..141431,141589..141682,141879..141932))	Acanthamoeba castellanii str. Neff	14914855
ACA1_106830	CDS	ACA1_106830	NW_004457356.1	147684	148313	D	encoded by transcript ACA1_106830A; uncharacterized protein	147684..148313	Acanthamoeba castellanii str. Neff	14914856
ACA1_106940	CDS	ACA1_106940	NW_004457356.1	150807	152513	R	encoded by transcript ACA1_106940A; uncharacterized protein	complement(join(150807..151024,151154..151224,151353..151514,151634..151761,151880..151955,152107..152513))	Acanthamoeba castellanii str. Neff	14914857
ACA1_106950	CDS	ACA1_106950	NW_004457356.1	152835	157430	D	encoded by transcript ACA1_106950A; PH domain containing protein	join(152835..152991,153171..153385,153519..153590,153775..153880,154118..154162,154221..154312,154327..154488,154859..155025,155143..155222,155391..155524,156386..156501,156667..156762,156921..157034,157211..157430)	Acanthamoeba castellanii str. Neff	14914858
ACA1_107160	CDS	ACA1_107160	NW_004457356.1	157643	163908	D	encoded by transcript ACA1_107160A; uncharacterized protein	join(157643..157873,157971..158109,158240..158305,158418..158503,158641..158766,158895..159011,159103..159183,159344..159431,159629..159729,159891..160015,160132..160306,160438..160504,160679..160809,160914..160983,161112..161296,161455..161645,161784..161910,162066..162150,162191..162267,162806..162916,163177..163908)	Acanthamoeba castellanii str. Neff	14914859
ACA1_107270	CDS	ACA1_107270	NW_004457356.1	163987	173963	R	encoded by transcript ACA1_107270A; ATPdependent metallopeptidase HflB subfamily protein	complement(join(163987..164358,164530..164682,164860..164958,165081..165199,165311..165716,165911..165979,166068..166213,166393..166503,166623..166714,166794..167095,167249..167346,167443..167627,167731..167816,167914..168018,168265..168331,168580..168692,169332..169385,169537..169642,169784..169863,169973..170092,170220..170303,170403..170528,170629..170729,170864..171091,171199..171358,171480..171617,171729..171902,172013..172109,172171..172364,172438..172494,172656..172783,172887..173088,173148..173209,173365..173427,173852..173963))	Acanthamoeba castellanii str. Neff	14914860
ACA1_107380	CDS	ACA1_107380	NW_004457356.1	174187	180367	R	encoded by transcript ACA1_107380A; RasGEF domain containing protein	complement(join(174187..174377,174487..174508,174786..174899,174924..175001,175082..175134,175229..175349,175425..175517,175593..175730,175828..176070,176145..176252,176337..176532,176644..176725,176833..176937,177030..177093,177174..177283,177388..177609,177704..177812,177926..178198,178271..178361,178481..178599,178665..178830,178959..179124,179249..179320,179395..179477,179989..180022,180241..180367))	Acanthamoeba castellanii str. Neff	14914861
ACA1_107390	CDS	ACA1_107390	NW_004457356.1	180637	183232	R	encoded by transcript ACA1_107390A; transporter, major facilitator subfamily protein	complement(join(180637..180807,181105..181198,181275..181380,181527..181653,181787..181965,182051..182213,182280..182386,182467..182545,182609..182884,182899..183002,183109..183232))	Acanthamoeba castellanii str. Neff	14914862
ACA1_107400	CDS	ACA1_107400	NW_004457356.1	183307	184692	R	encoded by transcript ACA1_107400A; nucleoside diphosphate, putative	complement(join(183307..183381,183406..183536,183733..183825,183906..183963,184071..184195,184282..184498,184609..184692))	Acanthamoeba castellanii str. Neff	14914863
ACA1_107410	CDS	ACA1_107410	NW_004457356.1	185654	187056	D	encoded by transcript ACA1_107410A; Ubiquitinconjugating enzyme subfamily protein	join(185654..185856,185972..186036,186114..186158,186227..186328,186424..186559,186689..186842,186982..187056)	Acanthamoeba castellanii str. Neff	14914864
ACA1_107420	CDS	ACA1_107420	NW_004457356.1	187541	191610	D	encoded by transcript ACA1_107420A; RhoGEF domain containing protein	join(187541..187654,187714..188656,188754..189013,189124..189231,189313..189408,189478..189642,189762..189906,189994..190242,190349..190424,190506..191610)	Acanthamoeba castellanii str. Neff	14914865
ACA1_107430	CDS	ACA1_107430	NW_004457356.1	192269	195975	D	encoded by transcript ACA1_107430A; RhoGEF domain containing protein	join(192269..192474,192648..193382,193475..193544,193680..193900,193987..194059,194139..194195,194292..194330,194443..195975)	Acanthamoeba castellanii str. Neff	14914866
ACA1_107440	CDS	ACA1_107440	NW_004457356.1	196354	198679	D	encoded by transcript ACA1_107440A; Ser/Thr phosphatase family protein	join(196354..196378,196569..196719,196825..196924,197026..197117,197263..197363,197509..197703,197818..197971,198099..198191,198293..198377,198488..198679)	Acanthamoeba castellanii str. Neff	14914867
ACA1_107450	CDS	ACA1_107450	NW_004457356.1	199194	201160	R	encoded by transcript ACA1_107450A; PB1 domain containing protein	complement(join(199194..199524,199621..199711,199785..199857,199983..200194,200331..200422,200532..201160))	Acanthamoeba castellanii str. Neff	14914868
ACA1_107460	CDS	ACA1_107460	NW_004457356.1	201462	202854	R	encoded by transcript ACA1_107460A; uncharacterized protein	complement(join(201462..201968,202025..202291,202377..202445,202681..202854))	Acanthamoeba castellanii str. Neff	14914869
ACA1_107470	CDS	ACA1_107470	NW_004457356.1	203040	203374	R	encoded by transcript ACA1_107470A; uncharacterized protein	complement(join(203040..203179,203239..203374))	Acanthamoeba castellanii str. Neff	14914870
ACA1_107480	CDS	ACA1_107480	NW_004457356.1	204387	207186	D	encoded by transcript ACA1_107480A; kinase, putative	join(204387..204507,204605..204729,204813..204898,204983..205160,205290..205352,205470..205556,205677..205779,205865..206043,206137..206215,206339..206473,206551..206692,206770..206843,206957..207186)	Acanthamoeba castellanii str. Neff	14914871
ACA1_107490	CDS	ACA1_107490	NW_004457356.1	207521	207919	R	encoded by transcript ACA1_107490A; uncharacterized protein	complement(207521..207919)	Acanthamoeba castellanii str. Neff	14914872
ACA1_107500	CDS	ACA1_107500	NW_004457356.1	209074	209885	R	encoded by transcript ACA1_107500A; uncharacterized protein	complement(join(209074..209201,209309..209368,209474..209619,209733..209762,209785..>209885))	Acanthamoeba castellanii str. Neff	14914873
ACA1_107510	CDS	ACA1_107510	NW_004457356.1	210324	212259	D	encoded by transcript ACA1_107510A; RhoGEF domain containing protein	join(210324..210371,210470..210562,210702..210785,210874..211023,211123..211256,211414..211453,211545..211658,211761..211847,211969..212259)	Acanthamoeba castellanii str. Neff	14914901
ACA1_107520	CDS	ACA1_107520	NW_004457356.1	212485	215240	D	encoded by transcript ACA1_107520A; C2 domain containing protein	join(212485..212533,212658..212769,212963..213090,213208..215240)	Acanthamoeba castellanii str. Neff	14914902
ACA1_107530	CDS	ACA1_107530	NW_004457356.1	215333	216561	R	encoded by transcript ACA1_107530A; Zn-finger in ubiquitin-hydrolases and other protein	complement(join(215333..215407,215509..215648,215771..215836,215932..216036,216161..216299,216403..216561))	Acanthamoeba castellanii str. Neff	14914903
ACA1_107540	CDS	ACA1_107540	NW_004457356.1	216826	218351	D	encoded by transcript ACA1_107540A; uncharacterized protein	join(216826..216985,217106..217260,217403..217615,217706..217931,218002..218088,218182..218351)	Acanthamoeba castellanii str. Neff	14914904
ACA1_107550	CDS	ACA1_107550	NW_004457356.1	218440	221297	R	encoded by transcript ACA1_107550A; carrier superfamily protein	complement(join(218440..218651,218740..218904,219051..219162,219251..219345,219482..219625,219750..219858,219966..220070,220204..220232,220339..220368,220550..220637,220726..220839,220928..221039,221140..221213,221289..221297))	Acanthamoeba castellanii str. Neff	14914905
ACA1_107560	CDS	ACA1_107560	NW_004457356.1	221995	223062	R	encoded by transcript ACA1_107560A; uncharacterized protein	complement(join(221995..222036,222109..222201,222324..222469,222663..223062))	Acanthamoeba castellanii str. Neff	14914906
ACA1_107570	CDS	ACA1_107570	NW_004457356.1	223511	224321	D	encoded by transcript ACA1_107570A; uncharacterized protein	join(223511..223571,223787..223853,223978..224073,224195..224321)	Acanthamoeba castellanii str. Neff	14914907
ACA1_107580	CDS	ACA1_107580	NW_004457356.1	224459	224905	R	encoded by transcript ACA1_107580A; Calcium/calmodulindependent protein kinase type II delta chain, putative	complement(join(224459..224581,224687..224905))	Acanthamoeba castellanii str. Neff	14914908
ACA1_107590	CDS	ACA1_107590	NW_004457356.1	225230	226506	D	encoded by transcript ACA1_107590A; translin	join(225230..225428,225540..225639,225731..225846,225941..226035,226122..226249,226386..226506)	Acanthamoeba castellanii str. Neff	14914909
ACA1_107600	CDS	ACA1_107600	NW_004457356.1	226716	228590	D	encoded by transcript ACA1_107600A; Mitochondrial chaperone bcs1, putative	join(226716..227057,227152..227465,227529..227603,227690..227772,227843..227927,228020..228159,228237..228325,228447..228590)	Acanthamoeba castellanii str. Neff	14914910
ACA1_107610	CDS	ACA1_107610	NW_004457356.1	229485	232224	D	encoded by transcript ACA1_107610A; aminotransferase, class III superfamily protein	join(229485..229599,229708..229796,229876..229994,230111..230177,230247..230377,230471..230690,231279..231537,231606..231932,232016..232224)	Acanthamoeba castellanii str. Neff	14914911
ACA1_107620	CDS	ACA1_107620	NW_004457356.1	232552	233598	R	encoded by transcript ACA1_107620A; uncharacterized protein	complement(join(232552..232665,232691..232810,232896..233026,233358..233598))	Acanthamoeba castellanii str. Neff	14914912
ACA1_107630	CDS	ACA1_107630	NW_004457356.1	234658	236589	D	encoded by transcript ACA1_107630A; exodeoxyribonuclease III, putative	join(<234658..234995,235099..235163,235268..235338,235422..235506,235609..235791,235902..236046,236210..236310,236423..236589)	Acanthamoeba castellanii str. Neff	14914894
ACA1_107640	CDS	ACA1_107640	NW_004457356.1	237554	242619	D	encoded by transcript ACA1_107640A; Signal transduction histidine kinase	join(237554..238194,238289..238439,238541..238691,238902..239087,239159..239347,239435..240582,240655..240783,240896..241310,241514..241737,241859..241946,242022..242216,242345..242443,242531..242619)	Acanthamoeba castellanii str. Neff	14914895
ACA1_107650	CDS	ACA1_107650	NW_004457356.1	243059	244027	D	encoded by transcript ACA1_107650A; uncharacterized protein	join(243059..243148,243233..243378,243488..243699,243768..>244027)	Acanthamoeba castellanii str. Neff	14914896
ACA1_313720	CDS	ACA1_313720	NW_004457355.1	821	1751	D	encoded by transcript ACA1_313720A; von Willebrand factor, type A, putative	join(821..1094,1167..1306,1401..1751)	Acanthamoeba castellanii str. Neff	14914838
ACA1_313730	CDS	ACA1_313730	NW_004457355.1	1902	4387	R	encoded by transcript ACA1_313730A; glycosyltransferase, group 2 domain containing protein	complement(join(1902..2059,2153..2271,2366..2560,2647..2735,2832..3286,3399..3546,3645..3854,4058..4387))	Acanthamoeba castellanii str. Neff	14914839
ACA1_313740	CDS	ACA1_313740	NW_004457355.1	4656	7527	R	encoded by transcript ACA1_313740A; Fbox domain containing protein	complement(join(4656..4919,4992..5138,5217..5459,5544..5661,5752..5991,6076..6212,6380..6465,6558..7079,7425..7527))	Acanthamoeba castellanii str. Neff	14914840
ACA1_313750	CDS	ACA1_313750	NW_004457355.1	8269	11897	R	encoded by transcript ACA1_313750A; uncharacterized protein	complement(join(8269..8292,8379..8794,8874..9083,9152..9219,9294..9393,9486..9580,9665..9761,9864..9993,10083..10153,10257..10466,10503..10547,10646..10755,10828..10986,11080..11176,11260..11311,11407..11516,11604..11747,11822..>11897))	Acanthamoeba castellanii str. Neff	14914841
ACA1_006570	CDS	ACA1_006570	NW_004457354.1	9929	10259	D	encoded by transcript ACA1_006570A; Fbox protein 27, putative	join(<9929..10047,10160..10259)	Acanthamoeba castellanii str. Neff	14914837
ACA1_006580	CDS	ACA1_006580	NW_004457354.1	10300	11694	R	encoded by transcript ACA1_006580A; dimethyladenosine transferase 1, mitochondrial	complement(join(10300..10377,10491..10566,10677..10924,11032..11075,11154..11258,11335..11465,11564..>11694))	Acanthamoeba castellanii str. Neff	14914836
ACA1_327370	CDS	ACA1_327370	NW_004457353.1	4955	5491	D	encoded by transcript ACA1_327370A; nitrate reductase (NADH), putative	join(4955..5036,5135..5255,5284..5407,5438..5491)	Acanthamoeba castellanii str. Neff	14914835
ACA1_327380	CDS	ACA1_327380	NW_004457353.1	5834	7464	R	encoded by transcript ACA1_327380A; uncharacterized protein	complement(join(5834..6225,6357..6470,6542..6782,6872..7060,7135..7464))	Acanthamoeba castellanii str. Neff	14914832
ACA1_327390	CDS	ACA1_327390	NW_004457353.1	7686	8649	D	encoded by transcript ACA1_327390A; uncharacterized protein	join(7686..7816,7889..8070,8157..8217,8292..8649)	Acanthamoeba castellanii str. Neff	14914833
ACA1_327400	CDS	ACA1_327400	NW_004457353.1	9557	12035	R	encoded by transcript ACA1_327400A; uncharacterized protein	complement(join(9557..9963,10022..10139,10253..10400,10577..10710,10813..10929,11034..11246,11324..11481,11573..11662,11771..12035))	Acanthamoeba castellanii str. Neff	14914834
ACA1_082120	CDS	ACA1_082120	NW_004457352.1	1095	1615	D	encoded by transcript ACA1_082120A; reverse transcriptase	join(1095..1425,1443..1615)	Acanthamoeba castellanii str. Neff	14914830
ACA1_082130	CDS	ACA1_082130	NW_004457352.1	2681	4998	D	encoded by transcript ACA1_082130A; uncharacterized protein	join(2681..2773,2854..2925,3014..3053,3170..3615,3693..3907,4001..4518,4534..4610,4725..4812,4904..4998)	Acanthamoeba castellanii str. Neff	14914824
ACA1_082140	CDS	ACA1_082140	NW_004457352.1	5441	7691	D	encoded by transcript ACA1_082140A; RNA 3'terminal phosphate cyclase	join(5441..5743,5818..5900,6028..6089,6261..6345,6453..6574,6811..6897,6978..7114,7196..7396,7497..7691)	Acanthamoeba castellanii str. Neff	14914825
ACA1_082150	CDS	ACA1_082150	NW_004457352.1	7768	14805	R	encoded by transcript ACA1_082150A; uncharacterized protein	complement(join(7768..8066,8142..8393,8488..8754,8833..8937,9004..9597,9683..9904,10008..10951,11118..11245,11319..11530,11596..11727,11831..11900,11969..12615,12865..13038,13122..13244,13316..13467,13559..13641,13710..13813,13908..14080,14167..14318,14406..14608,14667..>14805))	Acanthamoeba castellanii str. Neff	14914822
ACA1_082160	CDS	ACA1_082160	NW_004457352.1	15072	17294	D	encoded by transcript ACA1_082160A; Enolase-phosphatase E1, putative	join(15072..15133,15226..15370,15485..15593,15656..15710,15795..15913,16003..16142,16202..16354,16604..16694,16789..16897,16986..17152,17251..17294)	Acanthamoeba castellanii str. Neff	14914823
ACA1_082170	CDS	ACA1_082170	NW_004457352.1	17413	18745	R	encoded by transcript ACA1_082170A; alanine racemaselike protein	complement(join(17413..17684,17766..17913,18007..18197,18301..18745))	Acanthamoeba castellanii str. Neff	14914819
ACA1_082180	CDS	ACA1_082180	NW_004457352.1	19206	20974	D	encoded by transcript ACA1_082180A; acetyltransferase	join(19206..19525,19618..19725,19816..19916,20025..20111,20194..20293,20461..20974)	Acanthamoeba castellanii str. Neff	14914820
ACA1_082190	CDS	ACA1_082190	NW_004457352.1	21016	24452	R	encoded by transcript ACA1_082190A; uncharacterized protein	complement(join(21016..22025,22156..22321,22423..22542,22651..22811,22879..23269,23346..23458,23538..23655,23737..23904,23969..24006,24108..24227,24323..24452))	Acanthamoeba castellanii str. Neff	14914821
ACA1_082200	CDS	ACA1_082200	NW_004457352.1	24532	27642	R	encoded by transcript ACA1_082200A; uncharacterized protein	complement(join(24532..24668,24733..24798,24914..24994,25075..25117,25202..25761,25840..25911,25999..26064,26179..26898,27000..27068,27152..27273,27551..27642))	Acanthamoeba castellanii str. Neff	14914826
ACA1_082310	CDS	ACA1_082310	NW_004457352.1	27530	27879	D	encoded by transcript ACA1_082310A; uncharacterized protein	join(<27530..27685,27778..27879)	Acanthamoeba castellanii str. Neff	14914828
ACA1_082320	CDS	ACA1_082320	NW_004457352.1	28020	32695	R	encoded by transcript ACA1_082320A; DEAD/DEAH box helicase domain containing protein	complement(join(28020..28196,28278..28436,28525..28653,28747..28845,28936..29018,29122..29259,29334..29500,29570..30206,30315..30458,30550..30659,30762..30834,30939..31065,31118..31270,31299..31424,31474..31623,31738..31855,32004..32272,32354..32589,32680..32695))	Acanthamoeba castellanii str. Neff	14914827
ACA1_082430	CDS	ACA1_082430	NW_004457352.1	36520	36975	R	encoded by transcript ACA1_082430A; MAP3K epsilon protein kinase	complement(join(36520..36548,36624..36732,36811..36871,36971..36975))	Acanthamoeba castellanii str. Neff	14914829
ACA1_082540	CDS	ACA1_082540	NW_004457352.1	37683	38749	R	encoded by transcript ACA1_082540A; uncharacterized protein	complement(join(37683..38000,38167..38525,38665..38749))	Acanthamoeba castellanii str. Neff	14914831
ACA1_016130	CDS	ACA1_016130	NW_004457351.1	157	899	D	encoded by transcript ACA1_016130A; uncharacterized protein	join(157..333,450..899)	Acanthamoeba castellanii str. Neff	14914817
ACA1_016360	CDS	ACA1_016360	NW_004457351.1	5550	5980	D	encoded by transcript ACA1_016360A; uncharacterized protein	join(5550..5625,5724..5823,5921..>5980)	Acanthamoeba castellanii str. Neff	14914813
ACA1_016470	CDS	ACA1_016470	NW_004457351.1	6429	6675	R	encoded by transcript ACA1_016470A; uncharacterized protein	complement(<6429..6675)	Acanthamoeba castellanii str. Neff	14914814
ACA1_016480	CDS	ACA1_016480	NW_004457351.1	7361	10030	R	encoded by transcript ACA1_016480A; uncharacterized protein	complement(join(7361..7677,7740..8231,8325..8612,8710..8731,8798..8849,8963..9099,9163..9438,9485..9594,9785..9868,9958..10030))	Acanthamoeba castellanii str. Neff	14914815
ACA1_138750	CDS	ACA1_138750	NW_004457350.1	138	1560	D	encoded by transcript ACA1_138750A; uncharacterized protein	join(<138..542,703..1560)	Acanthamoeba castellanii str. Neff	14914811
ACA1_138760	CDS	ACA1_138760	NW_004457350.1	1768	4344	R	encoded by transcript ACA1_138760A; U2 snRNP auxilliary factor, large subunit, splicing factor subfamily protein	complement(join(1768..1908,2088..2192,2397..2569,2677..2991,3087..3177,3417..3536,3586..3741,3959..4210,4309..4344))	Acanthamoeba castellanii str. Neff	14914812
ACA1_138770	CDS	ACA1_138770	NW_004457350.1	4849	9174	D	encoded by transcript ACA1_138770A; ammonium transporter subfamily protein	join(4849..4919,5358..5382,5420..5466,5531..5677,5854..5924,6015..6198,6311..6437,6572..6784,6840..6979,7080..7176,7370..7714,8073..8123,8273..8448,8536..8693,8815..8907,9011..9174)	Acanthamoeba castellanii str. Neff	14914776
ACA1_138780	CDS	ACA1_138780	NW_004457350.1	9625	10664	D	encoded by transcript ACA1_138780A; uncharacterized protein	join(9625..9794,9892..10046,10169..10338,10431..10664)	Acanthamoeba castellanii str. Neff	14914777
ACA1_138790	CDS	ACA1_138790	NW_004457350.1	10953	11708	D	encoded by transcript ACA1_138790A; LIM domain containing protein	join(10953..11625,11689..11708)	Acanthamoeba castellanii str. Neff	14914803
ACA1_138800	CDS	ACA1_138800	NW_004457350.1	12664	14083	D	encoded by transcript ACA1_138800A; uncharacterized protein	join(12664..12684,12783..12933,13058..13540,13731..14083)	Acanthamoeba castellanii str. Neff	14914804
ACA1_138810	CDS	ACA1_138810	NW_004457350.1	14273	17919	R	encoded by transcript ACA1_138810A; SH2 domain containing protein	complement(join(14273..14422,14530..14662,14756..14869,14969..15080,15251..15362,15373..15383,15559..15783,15937..16062,16257..16354,16514..16881,16918..16989,17129..17158,17224..17582,17760..17919))	Acanthamoeba castellanii str. Neff	14914778
ACA1_138820	CDS	ACA1_138820	NW_004457350.1	18366	23050	D	encoded by transcript ACA1_138820A; uncharacterized protein	join(18366..19175,19376..19458,19614..19691,21217..21719,21882..22132,22327..22419,22625..23050)	Acanthamoeba castellanii str. Neff	14914779
ACA1_138930	CDS	ACA1_138930	NW_004457350.1	23238	27669	D	encoded by transcript ACA1_138930A; protein kinase domain containing protein	join(23238..23550,23678..24017,24207..24253,24480..24608,24710..24777,25049..25134,25336..25501,25766..25877,26033..26161,26284..26463,26647..26756,26824..26896,27043..27165,27304..27352,27507..27669)	Acanthamoeba castellanii str. Neff	14914780
ACA1_138940	CDS	ACA1_138940	NW_004457350.1	28217	31515	D	encoded by transcript ACA1_138940A; uncharacterized protein	join(28217..28240,28649..28804,29024..29072,29225..29697,29896..29994,30156..30305,30453..30582,30668..30752,30931..31271,31352..31515)	Acanthamoeba castellanii str. Neff	14914781
ACA1_138950	CDS	ACA1_138950	NW_004457350.1	34904	35827	R	encoded by transcript ACA1_138950A; retinal pigment epithelial membrane protein	complement(join(34904..34915,35002..35249,35338..35446,35540..35659,35813..35827))	Acanthamoeba castellanii str. Neff	14914782
ACA1_138960	CDS	ACA1_138960	NW_004457350.1	36084	37964	R	encoded by transcript ACA1_138960A; retinal pigment epithelial membrane protein	complement(join(36084..36124,36158..36289,36410..36516,36580..36715,36796..36902,37040..37091,37195..37300,37414..37470,37573..37647,37737..37964))	Acanthamoeba castellanii str. Neff	14914805
ACA1_138970	CDS	ACA1_138970	NW_004457350.1	38156	41755	R	encoded by transcript ACA1_138970A; uncharacterized protein	complement(join(38156..38268,38326..38557,38641..38805,38931..39478,39557..39904,40039..40166,40250..40356,40494..40611,40732..40866,41043..41755))	Acanthamoeba castellanii str. Neff	14914806
ACA1_138980	CDS	ACA1_138980	NW_004457350.1	42106	46401	R	encoded by transcript ACA1_138980A; dynamin family protein	complement(join(42106..42270,42372..42528,42724..42878,42989..43153,43380..44018,44176..44287,44489..44700,44840..44914,45038..45217,45405..45519,45653..46088,46344..46401))	Acanthamoeba castellanii str. Neff	14914807
ACA1_138990	CDS	ACA1_138990	NW_004457350.1	46774	50683	D	encoded by transcript ACA1_138990A; gammaadaptin 1, putative	join(46774..46973,47169..47310,47412..47771,47985..48124,48205..48336,48531..48849,48962..49182,49288..49604,49738..49887,50043..50209,50396..50500,50588..50683)	Acanthamoeba castellanii str. Neff	14914808
ACA1_139000	CDS	ACA1_139000	NW_004457350.1	50920	51315	R	encoded by transcript ACA1_139000A; Histone H2A variant, putative	complement(50920..51315)	Acanthamoeba castellanii str. Neff	14914809
ACA1_139010	CDS	ACA1_139010	NW_004457350.1	51656	53667	D	encoded by transcript ACA1_139010A; dTDPD-glucose 4,6-dehydratase	join(51656..51711,51794..51929,52026..52116,52186..52262,52351..52458,52515..52591,52691..52816,52895..52989,53100..53238,53326..53405,53492..53667)	Acanthamoeba castellanii str. Neff	14914810
ACA1_139020	CDS	ACA1_139020	NW_004457350.1	53844	57174	D	encoded by transcript ACA1_139020A; Armadillo/betacatenin-like repeat domain containing protein	join(53844..53901,53983..54105,54165..54329,54429..54551,54639..54761,54859..54984,55127..55258,55361..55480,55568..55696,55867..55998,56115..56234,56352..56480,56629..57107,57163..57174)	Acanthamoeba castellanii str. Neff	14914792
ACA1_139030	CDS	ACA1_139030	NW_004457350.1	57396	58977	D	encoded by transcript ACA1_139030A; WD repeatcontaining protein 69, putative	join(57396..57466,57522..57616,57693..57811,57932..58051,58431..58703,58789..58977)	Acanthamoeba castellanii str. Neff	14914793
ACA1_139040	CDS	ACA1_139040	NW_004457350.1	59167	59683	R	encoded by transcript ACA1_139040A; myosin-light-chain kinase	complement(join(59167..59423,59542..59683))	Acanthamoeba castellanii str. Neff	14914794
ACA1_139150	CDS	ACA1_139150	NW_004457350.1	60471	62875	D	encoded by transcript ACA1_139150A; ENT domain containing protein	join(60471..60556,60607..60701,61236..61307,61432..61615,61740..61778,62009..62501,62621..62875)	Acanthamoeba castellanii str. Neff	14914795
ACA1_139260	CDS	ACA1_139260	NW_004457350.1	63317	64585	R	encoded by transcript ACA1_139260A; GTPbinding protein	complement(join(63317..63360,63535..63689,63799..63910,64021..64101,64254..64332,64469..64585))	Acanthamoeba castellanii str. Neff	14914796
ACA1_139270	CDS	ACA1_139270	NW_004457350.1	65436	66236	R	encoded by transcript ACA1_139270A; uncharacterized protein	complement(65436..66236)	Acanthamoeba castellanii str. Neff	14914797
ACA1_139280	CDS	ACA1_139280	NW_004457350.1	66534	69355	R	encoded by transcript ACA1_139280A; protein kinase domain containing protein	complement(join(66534..66902,67006..67104,67434..67624,67727..67748,67828..67937,68245..68334,68427..68563,68751..69108,69194..69209,69320..69355))	Acanthamoeba castellanii str. Neff	14914798
ACA1_139390	CDS	ACA1_139390	NW_004457350.1	69381	72002	R	encoded by transcript ACA1_139390A; uncharacterized protein	complement(join(<69381..69908,69977..70776,70881..72002))	Acanthamoeba castellanii str. Neff	14914799
ACA1_139400	CDS	ACA1_139400	NW_004457350.1	72994	76008	D	encoded by transcript ACA1_139400A; WD domain, Gbeta repeat-containing protein	join(72994..73579,73685..73757,73923..74057,74255..74337,74502..74633,74746..74855,75062..75166,75340..75458,75608..75719,75871..76008)	Acanthamoeba castellanii str. Neff	14914800
ACA1_139410	CDS	ACA1_139410	NW_004457350.1	76426	82075	R	encoded by transcript ACA1_139410A; uncharacterized protein	complement(join(76426..76794,76957..77105,77216..77481,77577..77695,77781..77877,78012..78099,78186..78491,78573..78792,78925..80850,81045..81748,82057..82075))	Acanthamoeba castellanii str. Neff	14914801
ACA1_139420	CDS	ACA1_139420	NW_004457350.1	82628	84428	D	encoded by transcript ACA1_139420A; Calcium binding protein 39 (Mo25 protein) isoform 5, putative	join(82628..82900,83035..83322,83562..83687,83861..84107,84355..84428)	Acanthamoeba castellanii str. Neff	14914802
ACA1_139430	CDS	ACA1_139430	NW_004457350.1	84652	90146	R	encoded by transcript ACA1_139430A; kinesin motor domain containing protein	complement(join(84652..85055,85169..85233,85402..85595,85715..85798,85914..86162,86312..86377,86727..87173,87342..87733,87866..88011,88149..88298,88413..88561,88692..88774,88883..89029,89245..89388,89503..89659,89758..89831,89918..90014,90117..90146))	Acanthamoeba castellanii str. Neff	14914783
ACA1_139540	CDS	ACA1_139540	NW_004457350.1	90527	92348	D	encoded by transcript ACA1_139540A; protein serine/threonine kinase	join(90527..90582,90702..90911,91012..91150,91243..91369,91560..91635,91856..91968,92146..92348)	Acanthamoeba castellanii str. Neff	14914784
ACA1_139550	CDS	ACA1_139550	NW_004457350.1	92692	96195	D	encoded by transcript ACA1_139550A; nadph cytochrome P450, putative	join(92692..92919,93058..93219,93322..93473,93570..93794,93938..94045,94175..94360,94463..94756,94854..95089,95214..95350,95456..95623,95763..95836,96048..96195)	Acanthamoeba castellanii str. Neff	14914785
ACA1_139560	CDS	ACA1_139560	NW_004457350.1	96328	101034	R	encoded by transcript ACA1_139560A; uncharacterized protein	complement(join(96328..96489,96593..96685,96750..96866,96992..97136,97267..97450,97551..97620,97789..97928,98250..98423,98551..98668,98752..99102,99283..99468,99572..99659,99802..99898,100061..100090,100215..100325,100481..100538,100672..100745,101019..101034))	Acanthamoeba castellanii str. Neff	14914786
ACA1_139570	CDS	ACA1_139570	NW_004457350.1	101094	101457	R	encoded by transcript ACA1_139570A; uncharacterized protein	complement(join(101094..101272,101373..101457))	Acanthamoeba castellanii str. Neff	14914787
ACA1_139680	CDS	ACA1_139680	NW_004457350.1	104187	105911	R	encoded by transcript ACA1_139680A; uncharacterized protein	complement(join(104187..104212,104286..104414,104679..104748,104907..104985,105088..105196,105359..105911))	Acanthamoeba castellanii str. Neff	14914788
ACA1_139690	CDS	ACA1_139690	NW_004457350.1	106765	107268	D	encoded by transcript ACA1_139690A; uncharacterized protein	106765..107268	Acanthamoeba castellanii str. Neff	14914789
ACA1_139700	CDS	ACA1_139700	NW_004457350.1	109093	110959	D	encoded by transcript ACA1_139700A; uncharacterized protein	join(109093..109162,109233..109560,109718..109875,110050..110198,110428..110561,110695..110959)	Acanthamoeba castellanii str. Neff	14914790
ACA1_139710	CDS	ACA1_139710	NW_004457350.1	111870	114085	D	encoded by transcript ACA1_139710A; ankyrin repeat-containing protein	join(111870..112016,112291..112384,112481..112575,112825..113043,113127..113311,113450..113569,113683..113827,113966..114085)	Acanthamoeba castellanii str. Neff	14914791
ACA1_021910	CDS	ACA1_021910	NW_004457349.1	2575	3119	D	encoded by transcript ACA1_021910A; uncharacterized protein	join(2575..2886,2919..3119)	Acanthamoeba castellanii str. Neff	14914774
ACA1_021920	CDS	ACA1_021920	NW_004457349.1	3134	3982	D	encoded by transcript ACA1_021920A; uncharacterized protein	join(3134..3512,3534..3982)	Acanthamoeba castellanii str. Neff	14914775
ACA1_025980	CDS	ACA1_025980	NW_004457348.1	1	4104	R	encoded by transcript ACA1_025980A; uncharacterized protein	complement(join(<1..360,395..520,798..1201,1320..1499,1569..1823,1925..2008,2191..2287,2581..2672,2795..2881,2978..3180,3317..3506,3616..3695,3844..3961,4051..4104))	Acanthamoeba castellanii str. Neff	14914771
ACA1_026390	CDS	ACA1_026390	NW_004457348.1	9771	10173	R	encoded by transcript ACA1_026390A; EFhand domain containing protein	complement(join(9771..9941,10036..10173))	Acanthamoeba castellanii str. Neff	14914770
ACA1_026500	CDS	ACA1_026500	NW_004457348.1	12133	13355	R	encoded by transcript ACA1_026500A; uncharacterized protein	complement(join(12133..12415,12694..>13355))	Acanthamoeba castellanii str. Neff	14914769
ACA1_020630	CDS	ACA1_020630	NW_004457347.1	4978	5736	R	encoded by transcript ACA1_020630A; uncharacterized protein	complement(join(4978..5076,5107..5736))	Acanthamoeba castellanii str. Neff	14914766
ACA1_020640	CDS	ACA1_020640	NW_004457347.1	5912	6840	R	encoded by transcript ACA1_020640A; uncharacterized protein	complement(join(5912..6367,6379..6840))	Acanthamoeba castellanii str. Neff	14914764
ACA1_020650	CDS	ACA1_020650	NW_004457347.1	7302	8165	R	encoded by transcript ACA1_020650A; uncharacterized protein	complement(7302..8165)	Acanthamoeba castellanii str. Neff	14914765
ACA1_020660	CDS	ACA1_020660	NW_004457347.1	9207	9572	D	encoded by transcript ACA1_020660A; uncharacterized protein	9207..9572	Acanthamoeba castellanii str. Neff	14914767
ACA1_020670	CDS	ACA1_020670	NW_004457347.1	11042	12313	D	encoded by transcript ACA1_020670A; uncharacterized protein	join(11042..11048,11147..11211,11357..12313)	Acanthamoeba castellanii str. Neff	14914768
ACA1_131150	CDS	ACA1_131150	NW_004457346.1	2256	3635	R	encoded by transcript ACA1_131150A; Retrovirusrelated Pol polyprotein from transposon TNT 1-94, putative	complement(join(2256..3248,3291..3635))	Acanthamoeba castellanii str. Neff	14914723
ACA1_131160	CDS	ACA1_131160	NW_004457346.1	5043	6515	R	encoded by transcript ACA1_131160A; uncharacterized protein	complement(5043..6515)	Acanthamoeba castellanii str. Neff	14914724
ACA1_131170	CDS	ACA1_131170	NW_004457346.1	6996	8231	R	encoded by transcript ACA1_131170A; integrase core domain containing protein	complement(6996..8231)	Acanthamoeba castellanii str. Neff	14914716
ACA1_131180	CDS	ACA1_131180	NW_004457346.1	12022	12804	R	encoded by transcript ACA1_131180A; sitespecific recombinase, phage integrase subfamily protein	complement(join(12022..12315,12334..12804))	Acanthamoeba castellanii str. Neff	14914717
ACA1_131190	CDS	ACA1_131190	NW_004457346.1	17395	18351	R	encoded by transcript ACA1_131190A; uncharacterized protein	complement(join(17395..17490,17578..17663,17694..18112,18281..18351))	Acanthamoeba castellanii str. Neff	14914718
ACA1_131200	CDS	ACA1_131200	NW_004457346.1	19080	19451	R	encoded by transcript ACA1_131200A; uncharacterized protein	complement(19080..19451)	Acanthamoeba castellanii str. Neff	14914719
ACA1_131210	CDS	ACA1_131210	NW_004457346.1	20007	21356	R	encoded by transcript ACA1_131210A; uncharacterized protein	complement(20007..21356)	Acanthamoeba castellanii str. Neff	14914720
ACA1_131220	CDS	ACA1_131220	NW_004457346.1	21931	33340	R	encoded by transcript ACA1_131220A; Poly(ADPribose) polymerase catalytic domain containing protein	complement(join(21931..21967,22096..22222,22302..22404,22502..22613,22734..22856,22971..23075,23205..23333,23422..23570,23637..23902,23987..24246,24342..24461,24570..24712,24815..24964,25087..25250,25349..25886,25996..26071,26151..26317,26375..26566,26675..26892,26987..27115,27217..27390,27464..27597,27650..27748,27838..27998,28084..28424,28506..28722,28860..29603,29706..29818,29896..30121,30210..30411,30638..30837,30918..31025,31157..31288,31367..31582,31679..32002,32070..32522,32615..32826,32936..33038,33119..33340))	Acanthamoeba castellanii str. Neff	14914721
ACA1_131230	CDS	ACA1_131230	NW_004457346.1	33467	35082	R	encoded by transcript ACA1_131230A; oxidoreductase molybdopterin binding domain containing protein	complement(join(33467..33825,33892..33993,34090..34270,34370..34574,34754..35082))	Acanthamoeba castellanii str. Neff	14914722
ACA1_131240	CDS	ACA1_131240	NW_004457346.1	35436	37460	D	encoded by transcript ACA1_131240A; ribosomal protein S32, putative	join(35436..35642,35750..35909,35998..36111,36189..36246,36358..36450,36567..36642,36743..36831,36908..36998,37111..37234,37315..37460)	Acanthamoeba castellanii str. Neff	14914707
ACA1_131250	CDS	ACA1_131250	NW_004457346.1	37609	38220	R	encoded by transcript ACA1_131250A; uncharacterized protein	complement(37609..>38220)	Acanthamoeba castellanii str. Neff	14914708
ACA1_131360	CDS	ACA1_131360	NW_004457346.1	40138	41052	R	encoded by transcript ACA1_131360A; uncharacterized protein	complement(<40138..41052)	Acanthamoeba castellanii str. Neff	14914709
ACA1_131370	CDS	ACA1_131370	NW_004457346.1	41329	42129	D	encoded by transcript ACA1_131370A; Hypothetical protein	join(41329..41497,41577..41779,41869..42129)	Acanthamoeba castellanii str. Neff	14914710
ACA1_131380	CDS	ACA1_131380	NW_004457346.1	42328	43759	R	encoded by transcript ACA1_131380A; oxidoreductase molybdopterin binding domain containing protein	complement(join(42328..42686,42753..43017,43095..43308,43389..43759))	Acanthamoeba castellanii str. Neff	14914711
ACA1_131390	CDS	ACA1_131390	NW_004457346.1	43878	45239	D	encoded by transcript ACA1_131390A; deoxyribosephosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase	join(43878..43935,44023..44078,44154..44273,44333..44440,44530..44651,44706..44788,44870..44923,45007..45239)	Acanthamoeba castellanii str. Neff	14914712
ACA1_131410	CDS	ACA1_131410	NW_004457346.1	50349	51496	R	encoded by transcript ACA1_131410A; oxidoreductase	complement(join(50349..50864,50886..51444,51465..51496))	Acanthamoeba castellanii str. Neff	14914714
ACA1_131430	CDS	ACA1_131430	NW_004457346.1	53040	53968	R	encoded by transcript ACA1_131430A; uncharacterized protein	complement(join(53040..53289,53382..53674,53765..53968))	Acanthamoeba castellanii str. Neff	14914725
ACA1_131440	CDS	ACA1_131440	NW_004457346.1	56320	57590	R	encoded by transcript ACA1_131440A; alcohol dehydrogenase GroESlike domain containing protein	complement(join(56320..56517,56549..56608,56662..57281,57395..57590))	Acanthamoeba castellanii str. Neff	14914726
ACA1_131450	CDS	ACA1_131450	NW_004457346.1	58026	61557	R	encoded by transcript ACA1_131450A; FHA domain containing protein	complement(join(58026..58118,58219..58347,58483..58569,58662..58801,58882..58980,59073..59196,59252..59369,59460..59572,59681..60069,60186..60831,61003..61557))	Acanthamoeba castellanii str. Neff	14914727
ACA1_131460	CDS	ACA1_131460	NW_004457346.1	62371	64424	D	encoded by transcript ACA1_131460A; transporter, major facilitator superfamily superfamily protein	join(62371..62614,62799..62869,62962..63136,63213..63399,63508..64094,64198..64424)	Acanthamoeba castellanii str. Neff	14914728
ACA1_131470	CDS	ACA1_131470	NW_004457346.1	64563	65326	R	encoded by transcript ACA1_131470A; uncharacterized protein	complement(join(64563..65035,65122..65326))	Acanthamoeba castellanii str. Neff	14914729
ACA1_131480	CDS	ACA1_131480	NW_004457346.1	65644	66338	R	encoded by transcript ACA1_131480A; uncharacterized protein	complement(join(65644..65906,66015..66135,66246..66338))	Acanthamoeba castellanii str. Neff	14914730
ACA1_131490	CDS	ACA1_131490	NW_004457346.1	66595	69894	R	encoded by transcript ACA1_131490A; Histone-lysine N-methyltransferase	complement(join(66595..66828,66906..67027,67129..67224,67241..67414,67524..67592,67658..67787,67905..67995,68121..68209,68305..68388,68482..68574,68661..68753,68799..68870,68972..69054,69180..69249,69511..69894))	Acanthamoeba castellanii str. Neff	14914731
ACA1_131500	CDS	ACA1_131500	NW_004457346.1	69987	70888	D	encoded by transcript ACA1_131500A; SOH1 domain containing protein	join(69987..70097,70167..70269,70377..70455,70589..70720,70798..70888)	Acanthamoeba castellanii str. Neff	14914732
ACA1_131510	CDS	ACA1_131510	NW_004457346.1	71002	73711	R	encoded by transcript ACA1_131510A; uncharacterized protein	complement(join(71002..71198,71311..71572,71691..71777,71904..72233,72355..72454,72561..72700,72843..72926,73025..73090,73205..73357,73540..73571,73681..73711))	Acanthamoeba castellanii str. Neff	14914733
ACA1_131520	CDS	ACA1_131520	NW_004457346.1	74733	77977	D	encoded by transcript ACA1_131520A; SAM domain (Sterile alpha motif) domain containing protein	join(74733..75100,75211..75895,75916..77416,77497..77583,77671..77732,77834..77977)	Acanthamoeba castellanii str. Neff	14914734
ACA1_131530	CDS	ACA1_131530	NW_004457346.1	78511	79734	D	encoded by transcript ACA1_131530A; hydrolase, NUDIX domain containing protein	join(78511..79171,79273..79466,79582..79734)	Acanthamoeba castellanii str. Neff	14914735
ACA1_131540	CDS	ACA1_131540	NW_004457346.1	79888	82066	R	encoded by transcript ACA1_131540A; pentatricopeptide repeat domain containing protein	complement(join(79888..79993,80121..80242,80361..80470,80592..80673,80781..80895,80982..81178,81193..81629,81766..82066))	Acanthamoeba castellanii str. Neff	14914736
ACA1_131550	CDS	ACA1_131550	NW_004457346.1	82324	87830	R	encoded by transcript ACA1_131550A; cyclic nucleotidebinding domain containing protein	complement(join(82324..82392,82511..82587,82690..82753,82827..82906,82994..83102,83160..83337,83422..83564,83864..84034,84126..84254,84420..84521,84627..84774,84930..85035,85147..85234,85337..85428,85614..85788,85851..86017,86103..86184,86309..86400,86548..86680,86788..86867,86976..87042,87159..87272,87291..87696,87814..87830))	Acanthamoeba castellanii str. Neff	14914752
ACA1_131560	CDS	ACA1_131560	NW_004457346.1	88325	89491	R	encoded by transcript ACA1_131560A; uncharacterized protein	complement(join(88325..88380,88453..88504,88586..88679,88774..88889,88961..89077,89171..89224,89360..89491))	Acanthamoeba castellanii str. Neff	14914753
ACA1_131570	CDS	ACA1_131570	NW_004457346.1	89702	90368	R	encoded by transcript ACA1_131570A; transmembrane proteins 14c protein	complement(join(89702..89928,90030..90127,90244..90368))	Acanthamoeba castellanii str. Neff	14914754
ACA1_131580	CDS	ACA1_131580	NW_004457346.1	90484	91855	R	encoded by transcript ACA1_131580A; glycerol3-phosphate dehydrogenase	complement(join(90484..90776,90869..90988,91067..91174,91242..91321,91428..91855))	Acanthamoeba castellanii str. Neff	14914755
ACA1_131590	CDS	ACA1_131590	NW_004457346.1	92423	92853	R	encoded by transcript ACA1_131590A; uncharacterized protein	complement(join(92423..92490,92661..92736,92806..92853))	Acanthamoeba castellanii str. Neff	14914756
ACA1_131600	CDS	ACA1_131600	NW_004457346.1	94878	96265	R	encoded by transcript ACA1_131600A; uncharacterized protein	complement(join(94878..95155,95212..95370,95445..95607,95679..95800,95866..95965,96035..96265))	Acanthamoeba castellanii str. Neff	14914757
ACA1_131610	CDS	ACA1_131610	NW_004457346.1	96784	97707	R	encoded by transcript ACA1_131610A; uncharacterized protein	complement(join(96784..96964,97000..97193,97248..97616,97675..97707))	Acanthamoeba castellanii str. Neff	14914758
ACA1_131620	CDS	ACA1_131620	NW_004457346.1	97717	98262	R	encoded by transcript ACA1_131620A; uncharacterized protein	complement(97717..98262)	Acanthamoeba castellanii str. Neff	14914759
ACA1_131630	CDS	ACA1_131630	NW_004457346.1	104960	106339	R	encoded by transcript ACA1_131630A; START domain containing protein	complement(join(104960..105005,105100..105216,105294..105461,105696..105804,105890..105962,106052..106185,106276..106339))	Acanthamoeba castellanii str. Neff	14914760
ACA1_131740	CDS	ACA1_131740	NW_004457346.1	106799	114598	D	encoded by transcript ACA1_131740A; amino acid adenylation subfamily protein	join(106799..107265,107478..107562,107635..107755,107899..108111,108206..108340,108413..110552,110718..110795,110908..111143,111236..111350,111465..111554,111667..112040,112119..112214,112300..112446,112523..112916,112994..113610,113684..113799,113953..114365,114460..114598)	Acanthamoeba castellanii str. Neff	14914761
ACA1_131750	CDS	ACA1_131750	NW_004457346.1	116045	117751	R	encoded by transcript ACA1_131750A; uncharacterized protein	complement(116045..117751)	Acanthamoeba castellanii str. Neff	14914762
ACA1_131760	CDS	ACA1_131760	NW_004457346.1	118310	120862	R	encoded by transcript ACA1_131760A; nuclear distribution protein pac1, putative	complement(join(118310..118411,118493..118654,118753..118902,119027..119152,119230..119323,119428..119531,119632..119702,119815..119966,120091..120197,120447..120594,120831..120862))	Acanthamoeba castellanii str. Neff	14914763
ACA1_131770	CDS	ACA1_131770	NW_004457346.1	121616	128450	D	encoded by transcript ACA1_131770A; Ras subfamily protein	join(121616..121669,121740..121779,121924..121951,122325..122416,122507..122601,122718..122750,122857..122961,123061..123195,123371..123508,123635..123749,123853..123945,124026..124098,124199..124393,124482..124715,124915..125170,125313..125355,125437..125741,125815..125874,125994..126080,126198..126384,126500..126579,126708..126823,126907..127073,127214..127345,127465..127609,127676..127843,127930..128027,128112..128200,128319..128400,128437..128450)	Acanthamoeba castellanii str. Neff	14914737
ACA1_131780	CDS	ACA1_131780	NW_004457346.1	128490	131388	D	encoded by transcript ACA1_131780A; uncharacterized protein	join(128490..128670,128777..128859,129088..129215,129295..129339,129392..129423,129608..129784,129880..129977,130052..130168,130276..130376,130459..130610,130706..130783,130885..130982,131074..131160,131260..131388)	Acanthamoeba castellanii str. Neff	14914738
ACA1_131790	CDS	ACA1_131790	NW_004457346.1	131517	132554	D	encoded by transcript ACA1_131790A; protein from patent family protein	131517..132554	Acanthamoeba castellanii str. Neff	14914739
ACA1_131800	CDS	ACA1_131800	NW_004457346.1	132788	134330	D	encoded by transcript ACA1_131800A; uncharacterized protein	join(132788..132883,132977..133063,133179..133232,133452..133635,133745..133796,133919..133958,134073..134330)	Acanthamoeba castellanii str. Neff	14914740
ACA1_131810	CDS	ACA1_131810	NW_004457346.1	134516	134899	R	encoded by transcript ACA1_131810A; ribosomal protein S21e, putative	complement(join(134516..134745,134890..134899))	Acanthamoeba castellanii str. Neff	14914741
ACA1_131820	CDS	ACA1_131820	NW_004457346.1	135223	137003	D	encoded by transcript ACA1_131820A; zinc knuckle domain containing protein	join(135223..135802,135883..135983,136041..136181,136273..136512,136578..136691,136800..137003)	Acanthamoeba castellanii str. Neff	14914742
ACA1_131840	CDS	ACA1_131840	NW_004457346.1	139276	153831	R	encoded by transcript ACA1_131840A; HEAT repeat domain containing protein	complement(join(139276..140148,140269..140368,140453..140568,140734..140857,140973..141062,141174..141315,141444..141537,141655..141815,141925..141985,142063..142269,142374..142553,142647..142719,142807..143120,143204..143336,143428..143581,143759..144011,144143..144310,144371..145257,145381..145504,145616..145844,145936..146123,146264..146481,146591..146729,146809..146856,147131..147241,147335..147416,147534..147694,147826..147873,148064..148222,148343..148472,148604..148805,148913..149042,149157..149255,149354..149505,149627..149804,149934..150070,150173..150341,150445..150576,150656..150826,150921..151600,151735..151859,152011..152164,152246..152462,152587..152726,152850..152982,153303..153359,153448..153568,153695..153831))	Acanthamoeba castellanii str. Neff	14914744
ACA1_131850	CDS	ACA1_131850	NW_004457346.1	156250	156775	D	encoded by transcript ACA1_131850A; fructose6-phosphate 2-kinase/fructose-2,6-bisphosphatase	join(156250..156345,156463..156535,156600..156775)	Acanthamoeba castellanii str. Neff	14914745
ACA1_131860	CDS	ACA1_131860	NW_004457346.1	157483	159428	D	encoded by transcript ACA1_131860A; uncharacterized protein	join(157483..157492,157594..159428)	Acanthamoeba castellanii str. Neff	14914746
ACA1_131870	CDS	ACA1_131870	NW_004457346.1	159968	166431	R	encoded by transcript ACA1_131870A; uncharacterized protein	complement(join(159968..160783,160875..160993,161090..161203,161292..161381,161453..161563,161668..161731,161814..161958,162066..162252,162340..162446,162539..162751,162840..162965,163070..163172,163276..163402,163503..163603,163690..163951,164201..164295,164368..164409,164474..164549,164626..164728,164812..164960,165035..165108,165187..165380,165463..165556,165631..165757,165971..166032,166111..166178,166244..166431))	Acanthamoeba castellanii str. Neff	14914747
ACA1_131880	CDS	ACA1_131880	NW_004457346.1	166692	168002	R	encoded by transcript ACA1_131880A; acetyltransferase, GNAT superfamily protein	complement(join(166692..166848,166915..167067,167177..167255,167328..167425,167509..167675,167761..167814,167904..168002))	Acanthamoeba castellanii str. Neff	14914748
ACA1_131890	CDS	ACA1_131890	NW_004457346.1	168129	169456	D	encoded by transcript ACA1_131890A; EF hand domain containing protein	join(168129..168161,168285..168515,168586..168647,168746..168882,168963..169024,169096..169292,169384..169456)	Acanthamoeba castellanii str. Neff	14914749
ACA1_131900	CDS	ACA1_131900	NW_004457346.1	169576	170376	R	encoded by transcript ACA1_131900A; uncharacterized protein	complement(join(169576..170054,170190..170376))	Acanthamoeba castellanii str. Neff	14914750
ACA1_131910	CDS	ACA1_131910	NW_004457346.1	170814	172069	R	encoded by transcript ACA1_131910A; EF hand domain containing protein	complement(join(170814..171029,171114..171179,171281..171449,171566..171669,171861..171925,172009..172069))	Acanthamoeba castellanii str. Neff	14914751
ACA1_004850	CDS	ACA1_004850	NW_004457345.1	89	1566	R	encoded by transcript ACA1_004850A; Actinrelated protein 5, putative	complement(join(<89..187,352..451,537..732,822..930,1084..1241,1527..1566))	Acanthamoeba castellanii str. Neff	14914706
ACA1_004860	CDS	ACA1_004860	NW_004457345.1	1660	2001	R	encoded by transcript ACA1_004860A; uncharacterized protein	complement(join(1660..1715,1794..1938,1981..2001))	Acanthamoeba castellanii str. Neff	14914701
ACA1_004870	CDS	ACA1_004870	NW_004457345.1	2195	4475	R	encoded by transcript ACA1_004870A; pre-mRNA-splicing factor prp1, putative	complement(join(2195..2512,4359..4475))	Acanthamoeba castellanii str. Neff	14914702
ACA1_004980	CDS	ACA1_004980	NW_004457345.1	4818	6392	D	encoded by transcript ACA1_004980A; uncharacterized protein	join(4818..4827,5004..5145,5218..5315,5371..5535,5606..5683,5792..5869,5939..6037,6121..6192,6307..6392)	Acanthamoeba castellanii str. Neff	14914703
ACA1_004990	CDS	ACA1_004990	NW_004457345.1	6918	12859	D	encoded by transcript ACA1_004990A; uncharacterized protein	join(6918..10804,10852..11884,11898..12597,12630..12859)	Acanthamoeba castellanii str. Neff	14914704
ACA1_005000	CDS	ACA1_005000	NW_004457345.1	13247	15531	D	encoded by transcript ACA1_005000A; Serine/threonine kinase	join(13247..13392,13727..13832,14035..14112,14183..14238,14399..14459,14572..14839,14925..15062,15302..15397,15491..15531)	Acanthamoeba castellanii str. Neff	14914705
ACA1_005010	CDS	ACA1_005010	NW_004457345.1	16235	16643	D	encoded by transcript ACA1_005010A; uncharacterized protein	join(16235..16420,16503..>16643)	Acanthamoeba castellanii str. Neff	14914699
ACA1_005220	CDS	ACA1_005220	NW_004457345.1	22178	24153	D	encoded by transcript ACA1_005220A; DNA replication licensing factor Mcm2, putative	join(22178..22301,22456..22556,22667..22745,22872..23031,23120..23245,23338..23460,23567..23639,23810..23923,24001..>24153)	Acanthamoeba castellanii str. Neff	14914700
ACA1_322080	CDS	ACA1_322080	NW_004457344.1	72	1995	D	encoded by transcript ACA1_322080A; RNA recognition motif domain containing protein	join(72..507,578..727,790..1040,1112..1246,1332..1397,1507..1579,1658..1801,1874..1995)	Acanthamoeba castellanii str. Neff	14914694
ACA1_322090	CDS	ACA1_322090	NW_004457344.1	2604	10936	R	encoded by transcript ACA1_322090A; myosin head (motor domain) domain containing protein	complement(join(2604..3018,3138..3302,3409..3478,3583..3700,3851..3981,4125..4402,4471..4709,4819..5004,5130..5637,5740..6139,6233..6376,6469..6601,6742..6874,6961..7124,7202..7338,7443..7652,7727..7910,8035..8063,8172..8379,8453..8643,8739..8840,8909..9032,9128..9268,9377..9472,9553..9666,9746..9888,9966..10136,10220..10346,10428..10472,10622..10780,10904..10936))	Acanthamoeba castellanii str. Neff	14914690
ACA1_322110	CDS	ACA1_322110	NW_004457344.1	12807	13393	D	encoded by transcript ACA1_322110A; uncharacterized protein	join(12807..12976,13036..13135,13166..13393)	Acanthamoeba castellanii str. Neff	14914684
ACA1_322120	CDS	ACA1_322120	NW_004457344.1	13817	14821	D	encoded by transcript ACA1_322120A; uncharacterized protein	join(13817..13931,14094..14115,14196..14339,14444..14636,14678..14821)	Acanthamoeba castellanii str. Neff	14914686
ACA1_322130	CDS	ACA1_322130	NW_004457344.1	14823	17295	D	encoded by transcript ACA1_322130A; uncharacterized protein	join(14823..14922,14992..15150,15330..15378,15456..15546,15702..15854,15942..16070,16180..16222,16304..16462,16548..16627,16667..16722,16801..16886,16956..17038,17086..17295)	Acanthamoeba castellanii str. Neff	14914691
ACA1_322140	CDS	ACA1_322140	NW_004457344.1	17362	19601	R	encoded by transcript ACA1_322140A; glycosyltransferase 8 domain containing protein 1, putative	complement(join(17362..17582,17670..17801,17906..18005,18242..18323,18390..18517,18621..18740,18822..18919,19068..19187,19365..19409,19583..19601))	Acanthamoeba castellanii str. Neff	14914685
ACA1_322150	CDS	ACA1_322150	NW_004457344.1	19798	20908	D	encoded by transcript ACA1_322150A; uncharacterized protein	join(19798..19966,20040..20234,20408..20553,20639..20908)	Acanthamoeba castellanii str. Neff	14914692
ACA1_322160	CDS	ACA1_322160	NW_004457344.1	21145	22899	D	encoded by transcript ACA1_322160A; epoxide hydrolase 2, cytoplasmic, putative	join(21145..21305,21458..21575,21643..21737,21879..22002,22078..22213,22275..22404,22486..22615,22690..22758,22834..22899)	Acanthamoeba castellanii str. Neff	14914696
ACA1_322170	CDS	ACA1_322170	NW_004457344.1	22992	24478	R	encoded by transcript ACA1_322170A; papain family cysteine protease subfamily protein	complement(join(22992..23074,23172..23274,23406..23438,23506..23762,23817..23869,23971..24191,24263..24478))	Acanthamoeba castellanii str. Neff	14914683
ACA1_322180	CDS	ACA1_322180	NW_004457344.1	24708	25083	D	encoded by transcript ACA1_322180A; Tim10/DDP family zinc finger superfamily protein	join(24708..24793,24864..25083)	Acanthamoeba castellanii str. Neff	14914697
ACA1_322200	CDS	ACA1_322200	NW_004457344.1	25990	28583	D	encoded by transcript ACA1_322200A; pentatricopeptide repeat domain/PPR repeatcontaining protein	join(25990..26099,26178..26234,26325..26584,26675..26842,26914..27190,27274..27455,27551..27722,27822..27940,28026..28246,28368..28583)	Acanthamoeba castellanii str. Neff	14914688
ACA1_322210	CDS	ACA1_322210	NW_004457344.1	29210	31720	D	encoded by transcript ACA1_322210A; Rap/ranGAP	join(29210..29374,29605..29703,29823..30012,30090..30229,30320..30361,30469..30539,30622..30746,30860..30958,31077..31180,31312..31582,31677..31720)	Acanthamoeba castellanii str. Neff	14914689
ACA1_322220	CDS	ACA1_322220	NW_004457344.1	31886	34038	D	encoded by transcript ACA1_322220A; uncharacterized protein	join(31886..31964,32083..32256,32331..32716,32835..33505,33590..33690,33833..34038)	Acanthamoeba castellanii str. Neff	14914698
ACA1_322230	CDS	ACA1_322230	NW_004457344.1	34249	37162	R	encoded by transcript ACA1_322230A; UvrD/REP helicase subfamily protein	complement(join(34249..34431,34461..34517,34578..34645,34707..34769,34911..34996,35094..35226,35631..35743,35827..35946,36051..36152,36258..36367,36465..36596,36690..36794,36855..36965,37055..37162))	Acanthamoeba castellanii str. Neff	14914695
ACA1_363730	CDS	ACA1_363730	NW_004457343.1	4036	5085	D	encoded by transcript ACA1_363730A; oxidoreductase, zincbinding dehydrogenase superfamily protein	4036..5085	Acanthamoeba castellanii str. Neff	14914625
ACA1_363740	CDS	ACA1_363740	NW_004457343.1	6663	7518	D	encoded by transcript ACA1_363740A; uncharacterized protein	join(6663..7090,7236..7341,7450..7518)	Acanthamoeba castellanii str. Neff	14914450
ACA1_363750	CDS	ACA1_363750	NW_004457343.1	7734	8227	R	encoded by transcript ACA1_363750A; uncharacterized protein	complement(join(7734..7990,8113..8227))	Acanthamoeba castellanii str. Neff	14914451
ACA1_363760	CDS	ACA1_363760	NW_004457343.1	8325	9161	R	encoded by transcript ACA1_363760A; adenosine specific kinase	complement(join(8325..8417,8501..8623,8722..8771,8847..8925,8997..9161))	Acanthamoeba castellanii str. Neff	14914476
ACA1_363770	CDS	ACA1_363770	NW_004457343.1	9520	12476	D	encoded by transcript ACA1_363770A; uncharacterized protein	join(9520..9705,9767..9999,10343..10510,10629..10806,10908..11048,11161..11365,11443..11887,11976..12153,12288..12476)	Acanthamoeba castellanii str. Neff	14914477
ACA1_363780	CDS	ACA1_363780	NW_004457343.1	12717	14111	D	encoded by transcript ACA1_363780A; Vtype ATPase, D subunit	join(12717..12760,12853..12970,13051..13130,13280..13395,13534..13637,13724..13943,14026..14111)	Acanthamoeba castellanii str. Neff	14914517
ACA1_363800	CDS	ACA1_363800	NW_004457343.1	19858	21897	R	encoded by transcript ACA1_363800A; ABC transporter domain protein	complement(join(19858..19985,20091..20193,20278..20419,20506..20540,20631..20662,20798..20926,21106..21177,21288..21385,21506..21593,21753..21897))	Acanthamoeba castellanii str. Neff	14914587
ACA1_363810	CDS	ACA1_363810	NW_004457343.1	22443	23027	R	encoded by transcript ACA1_363810A; uncharacterized protein	complement(join(22443..22560,22593..22794,22805..23027))	Acanthamoeba castellanii str. Neff	14914588
ACA1_363820	CDS	ACA1_363820	NW_004457343.1	23301	27288	D	encoded by transcript ACA1_363820A; catalytic, putative	join(23301..23436,23703..23820,23937..24499,24619..24783,24883..25163,25285..25423,25526..25597,25727..26008,26084..26474,26617..26735,26818..26965,27058..27190,27235..27288)	Acanthamoeba castellanii str. Neff	14914589
ACA1_363830	CDS	ACA1_363830	NW_004457343.1	27417	30599	R	encoded by transcript ACA1_363830A; ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein	complement(join(27417..27567,27625..27939,28042..28276,28358..28760,28919..29160,29249..29404,29486..29654,29719..29940,30024..30599))	Acanthamoeba castellanii str. Neff	14914590
ACA1_363940	CDS	ACA1_363940	NW_004457343.1	32104	37483	R	encoded by transcript ACA1_363940A; GAF sensor hybrid histidine kinase	complement(join(32104..32124,32159..34057,35021..35938,36023..36165,36335..36752,37073..37483))	Acanthamoeba castellanii str. Neff	14914591
ACA1_364050	CDS	ACA1_364050	NW_004457343.1	39505	42115	R	encoded by transcript ACA1_364050A; uncharacterized protein	complement(join(39505..39660,39755..39818,39914..40034,40153..40267,40364..40509,40618..40839,40947..41102,41218..41463,41559..41750,41869..42115))	Acanthamoeba castellanii str. Neff	14914592
ACA1_364160	CDS	ACA1_364160	NW_004457343.1	44329	47069	D	encoded by transcript ACA1_364160A; BRCA1 C Terminus (BRCT) domain containing protein	join(44329..44493,44724..45742,45821..45939,46032..46333,46431..47069)	Acanthamoeba castellanii str. Neff	14914593
ACA1_364170	CDS	ACA1_364170	NW_004457343.1	47342	49754	D	encoded by transcript ACA1_364170A; Fbox domain containing protein	join(47342..47366,47462..47880,47967..48081,48245..48424,48578..48833,48918..49104,49251..49364,49524..49754)	Acanthamoeba castellanii str. Neff	14914601
ACA1_364180	CDS	ACA1_364180	NW_004457343.1	50684	52388	D	encoded by transcript ACA1_364180A; uncharacterized protein	join(50684..50687,51246..51361,51374..51504,51587..51773,51921..52094,52149..52388)	Acanthamoeba castellanii str. Neff	14914602
ACA1_364190	CDS	ACA1_364190	NW_004457343.1	53190	55646	R	encoded by transcript ACA1_364190A; Poly(ADPribose) polymerase catalytic domain containing protein	complement(join(53190..53267,53367..53474,53548..53991,54146..54220,54337..54444,54570..54657,54756..54859,55011..55234,55372..55390,55503..55646))	Acanthamoeba castellanii str. Neff	14914603
ACA1_364200	CDS	ACA1_364200	NW_004457343.1	56029	56666	R	encoded by transcript ACA1_364200A; uncharacterized protein	complement(join(56029..56206,56280..56460,56549..56666))	Acanthamoeba castellanii str. Neff	14914604
ACA1_364210	CDS	ACA1_364210	NW_004457343.1	57702	58367	D	encoded by transcript ACA1_364210A; protocatechuate dioxygenase	57702..58367	Acanthamoeba castellanii str. Neff	14914605
ACA1_364220	CDS	ACA1_364220	NW_004457343.1	58444	60055	R	encoded by transcript ACA1_364220A; uncharacterized protein	complement(join(58444..59926,60012..60055))	Acanthamoeba castellanii str. Neff	14914606
ACA1_364230	CDS	ACA1_364230	NW_004457343.1	60417	61548	R	encoded by transcript ACA1_364230A; uncharacterized protein	complement(join(60417..60520,60606..61548))	Acanthamoeba castellanii str. Neff	14914607
ACA1_364240	CDS	ACA1_364240	NW_004457343.1	61856	63765	R	encoded by transcript ACA1_364240A; cyclin, Nterminal domain containing protein	complement(join(61856..61950,62061..62135,62233..62327,62457..62630,62784..62947,63033..63137,63237..63321,63398..63765))	Acanthamoeba castellanii str. Neff	14914608
ACA1_364250	CDS	ACA1_364250	NW_004457343.1	63878	66189	R	encoded by transcript ACA1_364250A; 3' exoribonuclease family, domain 1 domain containing protein	complement(join(63878..64565,64688..64779,64897..64986,65107..65182,65256..65338,65443..65683,65770..65892,66008..66189))	Acanthamoeba castellanii str. Neff	14914609
ACA1_364260	CDS	ACA1_364260	NW_004457343.1	66381	67718	R	encoded by transcript ACA1_364260A; uncharacterized protein	complement(join(66381..66709,66815..67718))	Acanthamoeba castellanii str. Neff	14914610
ACA1_364270	CDS	ACA1_364270	NW_004457343.1	67893	69333	D	encoded by transcript ACA1_364270A; DTW domain containing 1, putative	join(67893..68075,68169..68278,68377..68419,68514..68612,68689..68789,68909..69003,69080..69137,69225..69333)	Acanthamoeba castellanii str. Neff	14914611
ACA1_364280	CDS	ACA1_364280	NW_004457343.1	69494	72499	D	encoded by transcript ACA1_364280A; sporulation proteinrelated, putative	join(69494..69931,70055..70499,70611..70961,71119..71357,71534..71890,71969..72499)	Acanthamoeba castellanii str. Neff	14914612
ACA1_364290	CDS	ACA1_364290	NW_004457343.1	72722	73534	D	encoded by transcript ACA1_364290A; K+ channel tetramerization subfamily protein	join(72722..72889,72917..73534)	Acanthamoeba castellanii str. Neff	14914440
ACA1_364300	CDS	ACA1_364300	NW_004457343.1	73634	75046	R	encoded by transcript ACA1_364300A; uncharacterized protein	complement(join(73634..73763,73833..73978,74152..74344,74425..74567,74727..74911,75022..75046))	Acanthamoeba castellanii str. Neff	14914441
ACA1_364310	CDS	ACA1_364310	NW_004457343.1	75719	78412	R	encoded by transcript ACA1_364310A; aldehyde dehydrogenase	complement(join(75719..75899,75991..76087,76191..76276,76361..76446,76535..76729,76808..76900,77015..77135,77215..77287,77384..77492,77600..77732,77803..77912,77952..77968,78033..78136,78219..78283,78380..78412))	Acanthamoeba castellanii str. Neff	14914442
ACA1_364320	CDS	ACA1_364320	NW_004457343.1	78577	84062	R	encoded by transcript ACA1_364320A; HEAT repeat domain containing protein	complement(join(78577..78646,78734..78831,78920..79007,79082..79171,79303..79546,79649..79791,79863..80020,80111..80295,80386..80516,80582..80742,80807..80991,81094..81238,81312..81421,81511..81667,81745..81898,81992..82133,82202..82322,82459..82703,82790..82837,82903..82978,83060..83188,83266..83460,83531..83707,83751..83818,83909..84062))	Acanthamoeba castellanii str. Neff	14914443
ACA1_364330	CDS	ACA1_364330	NW_004457343.1	85004	86370	R	encoded by transcript ACA1_364330A; uncharacterized protein	complement(join(85004..85097,85177..85434,85487..85601,85762..85898,85984..86111,86215..86370))	Acanthamoeba castellanii str. Neff	14914444
ACA1_364340	CDS	ACA1_364340	NW_004457343.1	86672	86968	D	encoded by transcript ACA1_364340A; uncharacterized protein	86672..86968	Acanthamoeba castellanii str. Neff	14914445
ACA1_364350	CDS	ACA1_364350	NW_004457343.1	87491	89879	D	encoded by transcript ACA1_364350A; von Willebrand factor type A domain containing protein	join(87491..87562,87662..87787,87915..88037,88140..88267,88377..88619,88697..88746,88823..88899,89007..89117,89236..89376,89484..89659,89729..89879)	Acanthamoeba castellanii str. Neff	14914446
ACA1_364370	CDS	ACA1_364370	NW_004457343.1	93170	94004	D	encoded by transcript ACA1_364370A; glutathione transferase family protein	join(93170..93326,93429..93751,93834..94004)	Acanthamoeba castellanii str. Neff	14914448
ACA1_364380	CDS	ACA1_364380	NW_004457343.1	94604	96182	D	encoded by transcript ACA1_364380A; uncharacterized protein	join(94604..94657,94790..95772,95870..96182)	Acanthamoeba castellanii str. Neff	14914449
ACA1_364390	CDS	ACA1_364390	NW_004457343.1	96576	97239	D	encoded by transcript ACA1_364390A; ribosomal L27e protein family	join(<96576..96814,96896..97006,97191..97239)	Acanthamoeba castellanii str. Neff	14914529
ACA1_364400	CDS	ACA1_364400	NW_004457343.1	98208	101098	D	encoded by transcript ACA1_364400A; uncharacterized protein	join(98208..98993,99136..99184,99249..99301,99387..99614,99705..100350,100439..100765,100881..101098)	Acanthamoeba castellanii str. Neff	14914530
ACA1_364410	CDS	ACA1_364410	NW_004457343.1	102414	108869	R	encoded by transcript ACA1_364410A; uncharacterized protein	complement(join(102414..102545,102646..102792,103208..103362,103501..103695,103789..103870,103943..104134,104475..104629,104753..104947,105019..105110,105198..105655,105788..106394,106511..106655,106755..106924,107047..107096,107174..107296,107384..107553,107661..108141,108219..108449,108534..108869))	Acanthamoeba castellanii str. Neff	14914531
ACA1_364420	CDS	ACA1_364420	NW_004457343.1	109151	109401	R	encoded by transcript ACA1_364420A; ribosomal protein s30 protein	complement(join(109151..109356,109395..109401))	Acanthamoeba castellanii str. Neff	14914532
ACA1_364430	CDS	ACA1_364430	NW_004457343.1	109852	111314	R	encoded by transcript ACA1_364430A; uncharacterized protein	complement(join(109852..109916,109996..110032,110128..110426,110500..110583,110695..110805,110874..110937,110998..111150,111174..111192,111241..111314))	Acanthamoeba castellanii str. Neff	14914533
ACA1_364440	CDS	ACA1_364440	NW_004457343.1	111708	112274	D	encoded by transcript ACA1_364440A; uncharacterized protein	join(111708..111883,111959..112274)	Acanthamoeba castellanii str. Neff	14914534
ACA1_364450	CDS	ACA1_364450	NW_004457343.1	112297	112779	D	encoded by transcript ACA1_364450A; acetyltransferase, GNAT superfamily protein	join(112297..112333,112433..112531,112607..112779)	Acanthamoeba castellanii str. Neff	14914535
ACA1_364460	CDS	ACA1_364460	NW_004457343.1	114027	114329	R	encoded by transcript ACA1_364460A; uncharacterized protein	complement(114027..114329)	Acanthamoeba castellanii str. Neff	14914536
ACA1_364470	CDS	ACA1_364470	NW_004457343.1	115498	116151	D	encoded by transcript ACA1_364470A; uncharacterized protein	join(115498..115564,115629..115885,116029..116151)	Acanthamoeba castellanii str. Neff	14914537
ACA1_364480	CDS	ACA1_364480	NW_004457343.1	116509	118699	R	encoded by transcript ACA1_364480A; uncharacterized protein	complement(join(116509..116690,116764..116840,116903..117164,117333..117408,117791..118049,118152..118422,118504..118699))	Acanthamoeba castellanii str. Neff	14914538
ACA1_364490	CDS	ACA1_364490	NW_004457343.1	119529	122379	R	encoded by transcript ACA1_364490A; protein kinase domain containing protein	complement(join(119529..119575,119593..120600,120680..120787,120875..121004,121108..121227,121333..121419,121506..121619,121734..121865,121971..122092,122211..122379))	Acanthamoeba castellanii str. Neff	14914539
ACA1_364500	CDS	ACA1_364500	NW_004457343.1	122677	124889	R	encoded by transcript ACA1_364500A; EH-binding protein, putative	complement(join(122677..122877,122999..123208,123323..123445,123521..123858,123947..124064,124198..124611,124668..124736,124806..124889))	Acanthamoeba castellanii str. Neff	14914540
ACA1_364510	CDS	ACA1_364510	NW_004457343.1	125006	126859	R	encoded by transcript ACA1_364510A; kelch repeatcontaining protein	complement(join(125006..125294,125401..125473,125556..125649,125747..125838,125911..126066,126178..126333,126390..126431,126503..126554,126627..126691,126772..126859))	Acanthamoeba castellanii str. Neff	14914452
ACA1_364520	CDS	ACA1_364520	NW_004457343.1	127090	128602	R	encoded by transcript ACA1_364520A; Alpha(1,3)-fucosyltransferase 11, putative	complement(join(127090..127695,127756..128267,128335..128602))	Acanthamoeba castellanii str. Neff	14914453
ACA1_364540	CDS	ACA1_364540	NW_004457343.1	135554	138248	R	encoded by transcript ACA1_364540A; uncharacterized protein	complement(join(135554..135775,135858..136123,136203..136317,136476..136667,136816..136921,137042..137661,137683..138008,138065..138248))	Acanthamoeba castellanii str. Neff	14914455
ACA1_364550	CDS	ACA1_364550	NW_004457343.1	138860	142597	D	encoded by transcript ACA1_364550A; SHQ1 protein	join(138860..139199,139301..139392,139449..139742,139856..139962,140061..140553,140646..141567,141651..141733,141799..141932,142108..142284,142441..142597)	Acanthamoeba castellanii str. Neff	14914456
ACA1_364560	CDS	ACA1_364560	NW_004457343.1	143256	144121	D	encoded by transcript ACA1_364560A; uncharacterized protein	join(143256..143847,143865..144121)	Acanthamoeba castellanii str. Neff	14914457
ACA1_364570	CDS	ACA1_364570	NW_004457343.1	144248	149508	D	encoded by transcript ACA1_364570A; uncharacterized protein	join(144248..145145,145294..145690,145787..145916,145929..146727,146853..146965,147076..147185,147290..147483,147593..147706,147930..148248,148382..148577,148645..148905,148977..149223,149471..149508)	Acanthamoeba castellanii str. Neff	14914458
ACA1_364580	CDS	ACA1_364580	NW_004457343.1	150331	150864	D	encoded by transcript ACA1_364580A; uncharacterized protein	150331..150864	Acanthamoeba castellanii str. Neff	14914459
ACA1_364590	CDS	ACA1_364590	NW_004457343.1	151436	152231	D	encoded by transcript ACA1_364590A; uncharacterized protein	join(151436..151650,151737..152113,152194..152231)	Acanthamoeba castellanii str. Neff	14914460
ACA1_364600	CDS	ACA1_364600	NW_004457343.1	152368	153815	R	encoded by transcript ACA1_364600A; zinc transporter ZupT, putative	complement(join(152368..152422,152653..152751,152889..152974,153284..153439,153516..153667,153743..153815))	Acanthamoeba castellanii str. Neff	14914461
ACA1_364610	CDS	ACA1_364610	NW_004457343.1	155831	157253	R	encoded by transcript ACA1_364610A; cellulase (glycosyl hydrolase family 5) subfamily protein	complement(join(155831..156298,156406..156647,156731..157253))	Acanthamoeba castellanii str. Neff	14914462
ACA1_364620	CDS	ACA1_364620	NW_004457343.1	157620	159380	R	encoded by transcript ACA1_364620A; palmitoyl protein thioesterase	complement(join(157620..157851,157960..158072,158230..158372,158489..158594,158681..158785,158872..158946,159033..159166,159287..159380))	Acanthamoeba castellanii str. Neff	14914463
ACA1_364630	CDS	ACA1_364630	NW_004457343.1	160957	163466	R	encoded by transcript ACA1_364630A; Fbox domain containing protein	complement(join(160957..161135,161210..161371,161476..161665,161927..162090,162180..162372,162481..162576,162648..163466))	Acanthamoeba castellanii str. Neff	14914464
ACA1_364640	CDS	ACA1_364640	NW_004457343.1	164416	165959	D	encoded by transcript ACA1_364640A; oxidoreductase, short chain dehydrogenase/reductase superfamily protein	join(164416..164485,164546..164651,164746..164862,164950..165046,165177..165303,165410..165466,165551..165614,165716..165959)	Acanthamoeba castellanii str. Neff	14914670
ACA1_364650	CDS	ACA1_364650	NW_004457343.1	166040	168029	R	encoded by transcript ACA1_364650A; uncharacterized protein	complement(join(166040..166300,166407..166605,166718..166815,166989..167071,167212..167334,167450..168029))	Acanthamoeba castellanii str. Neff	14914671
ACA1_364660	CDS	ACA1_364660	NW_004457343.1	170350	173389	R	encoded by transcript ACA1_364660A; Fbox domain containing protein	complement(join(170350..170555,170673..170832,170941..171063,171169..171287,171347..171437,171496..171585,171684..171772,171860..171961,172069..172171,172319..172496,172645..173010,173157..173389))	Acanthamoeba castellanii str. Neff	14914672
ACA1_364670	CDS	ACA1_364670	NW_004457343.1	173586	174605	R	encoded by transcript ACA1_364670A; uncharacterized protein	complement(join(173586..173849,173933..174133,174209..174403,174498..174605))	Acanthamoeba castellanii str. Neff	14914673
ACA1_364680	CDS	ACA1_364680	NW_004457343.1	175526	177039	D	encoded by transcript ACA1_364680A; BTB/POZ domain containing protein	join(175526..176138,176259..176664,176706..177039)	Acanthamoeba castellanii str. Neff	14914674
ACA1_364690	CDS	ACA1_364690	NW_004457343.1	177502	178384	D	encoded by transcript ACA1_364690A; EF hand domain containing protein	join(177502..177634,177736..177916,178015..178153,178226..178384)	Acanthamoeba castellanii str. Neff	14914675
ACA1_364700	CDS	ACA1_364700	NW_004457343.1	178540	179415	R	encoded by transcript ACA1_364700A; Ras family protein	complement(join(178540..178986,179095..179227,179342..179415))	Acanthamoeba castellanii str. Neff	14914676
ACA1_364710	CDS	ACA1_364710	NW_004457343.1	179540	182768	R	encoded by transcript ACA1_364710A; uncharacterized protein	complement(join(179540..179584,179611..180147,180204..180276,180395..180827,180906..180989,181090..181173,181256..181363,181589..182768))	Acanthamoeba castellanii str. Neff	14914677
ACA1_364720	CDS	ACA1_364720	NW_004457343.1	183562	186255	R	encoded by transcript ACA1_364720A; Sas10/Utp3/C1D family protein	complement(join(183562..183890,183983..184222,184299..184376,184458..184667,184743..184893,185230..185338,185418..185576,185658..185796,185943..186255))	Acanthamoeba castellanii str. Neff	14914678
ACA1_364730	CDS	ACA1_364730	NW_004457343.1	186702	187181	R	encoded by transcript ACA1_364730A; histone L3 H2a, putative	complement(join(186702..186993,187036..187181))	Acanthamoeba castellanii str. Neff	14914679
ACA1_364740	CDS	ACA1_364740	NW_004457343.1	187700	188428	R	encoded by transcript ACA1_364740A; Yip1 domain containing protein	complement(join(187700..187830,187930..188428))	Acanthamoeba castellanii str. Neff	14914680
ACA1_364750	CDS	ACA1_364750	NW_004457343.1	189334	190379	R	encoded by transcript ACA1_364750A; Zn-finger in ubiquitin-hydrolases and other protein	complement(join(189334..189443,189571..189597,189671..189811,189932..190220,190278..190379))	Acanthamoeba castellanii str. Neff	14914613
ACA1_364760	CDS	ACA1_364760	NW_004457343.1	190560	192822	D	encoded by transcript ACA1_364760A; endonuclease	join(190560..190596,190706..190830,190976..191053,191279..191396,191494..191609,191713..191813,191957..192031,192318..192406,192500..192624,192766..192822)	Acanthamoeba castellanii str. Neff	14914614
ACA1_364770	CDS	ACA1_364770	NW_004457343.1	192955	195254	R	encoded by transcript ACA1_364770A; uncharacterized protein	complement(join(192955..193245,193391..193500,193585..193690,193762..194007,194104..194286,194466..194558,194643..194721,194891..195065,195203..195254))	Acanthamoeba castellanii str. Neff	14914615
ACA1_364780	CDS	ACA1_364780	NW_004457343.1	195601	198855	R	encoded by transcript ACA1_364780A; lung seven transmembrane receptor protein	complement(join(195601..195726,195840..196001,196098..196164,196237..196305,196421..196575,196694..196811,196891..196969,197196..197286,197431..197523,197655..197735,197849..197914,198041..198196,198321..198418,198621..198855))	Acanthamoeba castellanii str. Neff	14914616
ACA1_364890	CDS	ACA1_364890	NW_004457343.1	199779	200414	D	encoded by transcript ACA1_364890A; uncharacterized protein	join(199779..199988,200046..200103,200152..200414)	Acanthamoeba castellanii str. Neff	14914617
ACA1_364900	CDS	ACA1_364900	NW_004457343.1	200437	200805	D	encoded by transcript ACA1_364900A; SWIM zinc finger domain containing protein	200437..200805	Acanthamoeba castellanii str. Neff	14914618
ACA1_365010	CDS	ACA1_365010	NW_004457343.1	201479	202732	R	encoded by transcript ACA1_365010A; uncharacterized protein	complement(join(201479..201802,201924..201991,202077..202146,202248..202407,202490..202533,202598..202732))	Acanthamoeba castellanii str. Neff	14914619
ACA1_365020	CDS	ACA1_365020	NW_004457343.1	202846	203762	D	encoded by transcript ACA1_365020A; uncharacterized protein	join(202846..203089,203315..203401,203548..203762)	Acanthamoeba castellanii str. Neff	14914620
ACA1_365030	CDS	ACA1_365030	NW_004457343.1	204154	209552	D	encoded by transcript ACA1_365030A; PH domain containing protein	join(204154..204174,204202..204291,204472..204708,205331..205432,205788..205868,206032..206133,206296..206610,206697..207087,207210..207342,207483..207543,207673..207765,207851..208037,208138..208305,208412..208522,208632..208794,208910..209039,209178..209552)	Acanthamoeba castellanii str. Neff	14914621
ACA1_365040	CDS	ACA1_365040	NW_004457343.1	209702	210935	R	encoded by transcript ACA1_365040A; uncharacterized protein	complement(join(209702..209875,209954..209978,210070..210155,210268..210336,210503..210655,210843..210935))	Acanthamoeba castellanii str. Neff	14914622
ACA1_365050	CDS	ACA1_365050	NW_004457343.1	211423	215255	R	encoded by transcript ACA1_365050A; uncharacterized protein	complement(join(211423..211524,211692..211790,211905..211998,212086..212191,212314..212405,212495..212552,212862..212918,213005..213127,213224..213287,213366..213443,213565..213684,213758..213955,214081..214192,214276..214373,214506..214591,214706..214853,214947..215037,215104..215255))	Acanthamoeba castellanii str. Neff	14914623
ACA1_365060	CDS	ACA1_365060	NW_004457343.1	215295	215683	R	encoded by transcript ACA1_365060A; cytochrome b5, putative	complement(join(215295..215399,215504..215683))	Acanthamoeba castellanii str. Neff	14914624
ACA1_365070	CDS	ACA1_365070	NW_004457343.1	215779	229790	R	encoded by transcript ACA1_365070A; Beige/BEACH domain containing protein	complement(join(215779..216167,216332..216454,216615..216749,216853..217009,217108..217221,217306..217497,217638..217966,218100..218170,218250..218448,218559..218697,218806..218960,219169..219325,219420..219539,219652..219926,220064..220162,220253..220351,220436..220583,220684..220768,220955..221636,221735..221850,221928..222011,222160..222293,222387..222847,222950..223056,223167..223293,223367..223491,223608..223782,223855..224012,224152..224288,224395..224578,224659..224999,225146..225422,225508..226173,226263..226743,226813..227146,227260..227376,227465..227780,227862..228739,228824..229204,229491..229790))	Acanthamoeba castellanii str. Neff	14914594
ACA1_365080	CDS	ACA1_365080	NW_004457343.1	229977	233204	R	encoded by transcript ACA1_365080A; uncharacterized protein	complement(join(229977..230208,230289..230883,230961..231403,231495..231600,231675..231725,231799..232321,232413..232511,232569..232737,232823..232905,232998..233061,233164..233204))	Acanthamoeba castellanii str. Neff	14914595
ACA1_365090	CDS	ACA1_365090	NW_004457343.1	233499	235284	D	encoded by transcript ACA1_365090A; ADPribosylglycohydrolase superfamily protein	join(233499..233604,233684..233838,233922..234055,234190..234290,234366..234437,234504..234619,234701..234844,234925..235057,235121..235284)	Acanthamoeba castellanii str. Neff	14914596
ACA1_365100	CDS	ACA1_365100	NW_004457343.1	235383	238622	R	encoded by transcript ACA1_365100A; U3 small nucleolar RNA-associated protein 6 protein	complement(join(235383..235557,235652..235756,235876..235997,236084..236158,236255..236413,236528..236683,236771..236913,237043..237148,237165..237279,237386..237486,237578..237720,237807..237898,238006..238174,238321..238465,238542..238622))	Acanthamoeba castellanii str. Neff	14914597
ACA1_365110	CDS	ACA1_365110	NW_004457343.1	239331	240841	D	encoded by transcript ACA1_365110A; uncharacterized protein	join(239331..239375,239444..239572,239673..239811,240039..240319,240431..240565,240641..240738,240820..240841)	Acanthamoeba castellanii str. Neff	14914598
ACA1_365220	CDS	ACA1_365220	NW_004457343.1	242051	248299	D	encoded by transcript ACA1_365220A; HEAT repeat domain containing protein	join(242051..242177,242313..242389,242460..242761,242842..243168,243246..243363,243448..243693,243769..244240,244378..244537,244635..245095,245194..245463,245578..245711,245975..246112,246233..246397,246475..246599,246774..247039,247143..247378,247491..248043,248127..248299)	Acanthamoeba castellanii str. Neff	14914599
ACA1_365330	CDS	ACA1_365330	NW_004457343.1	248468	249189	R	encoded by transcript ACA1_365330A; uncharacterized protein	complement(join(248468..248579,248667..248907,249120..249189))	Acanthamoeba castellanii str. Neff	14914600
ACA1_365340	CDS	ACA1_365340	NW_004457343.1	249367	250086	D	encoded by transcript ACA1_365340A; uncharacterized protein	join(249367..249436,249526..249603,249683..249874,249944..250086)	Acanthamoeba castellanii str. Neff	14914519
ACA1_365350	CDS	ACA1_365350	NW_004457343.1	250209	250829	R	encoded by transcript ACA1_365350A; Ubiquitinconjugating enzyme subfamily protein	complement(join(250209..250560,250657..250829))	Acanthamoeba castellanii str. Neff	14914520
ACA1_365360	CDS	ACA1_365360	NW_004457343.1	251029	253537	R	encoded by transcript ACA1_365360A; uncharacterized protein	complement(join(251029..251164,251292..251365,251468..251614,251631..252497,252531..252680,252757..252911,252998..253133,253258..253336,253443..253537))	Acanthamoeba castellanii str. Neff	14914521
ACA1_365370	CDS	ACA1_365370	NW_004457343.1	254058	255931	D	encoded by transcript ACA1_365370A; polyhydroxybutyrate depolymerase	join(254058..254163,254257..254318,254377..254480,254716..254825,254901..255006,255078..255210,255304..255409,255488..255594,255672..255742,255838..255931)	Acanthamoeba castellanii str. Neff	14914522
ACA1_365380	CDS	ACA1_365380	NW_004457343.1	256456	257921	D	encoded by transcript ACA1_365380A; PHB depolymerase	join(256456..256486,256620..256877,256939..257044,257111..257246,257295..257430,257516..257622,257693..257763,257819..257921)	Acanthamoeba castellanii str. Neff	14914523
ACA1_365390	CDS	ACA1_365390	NW_004457343.1	258300	270395	D	encoded by transcript ACA1_365390A; ubiquitin domain containing protein	join(258300..258387,258486..258627,258793..258973,259104..259178,259258..259501,259589..259652,259738..259968,260085..260247,260338..260529,260647..260872,260973..261640,261737..261826,261917..262017,262103..262355,262435..262578,262708..263056,263151..263332,263419..263618,263714..263933,264018..264127,264231..264723,264848..264937,265054..265453,265560..265876,265961..266141,266230..266393,266471..266755,266853..267029,267113..267322,267407..267606,267711..268203,268300..269147,269241..269452,269547..269781,269888..270029,270153..270395)	Acanthamoeba castellanii str. Neff	14914524
ACA1_365400	CDS	ACA1_365400	NW_004457343.1	270543	271130	D	encoded by transcript ACA1_365400A; uncharacterized protein	270543..271130	Acanthamoeba castellanii str. Neff	14914525
ACA1_365410	CDS	ACA1_365410	NW_004457343.1	271261	274109	D	encoded by transcript ACA1_365410A; Ras subfamily protein	join(271261..271551,271634..271743,271853..271938,272009..272169,272245..272400,272507..272654,272743..272853,272952..273064,273168..273336,273419..273535,273652..273749,273933..274109)	Acanthamoeba castellanii str. Neff	14914526
ACA1_365420	CDS	ACA1_365420	NW_004457343.1	274400	278713	D	encoded by transcript ACA1_365420A; HEAT repeat domain containing protein	join(274400..274986,275043..275149,275273..275436,275521..275759,275899..276231,276358..276427,276494..276742,276824..277016,277074..277162,277217..277309,277409..277580,277728..277894,277961..278713)	Acanthamoeba castellanii str. Neff	14914527
ACA1_365430	CDS	ACA1_365430	NW_004457343.1	278910	284367	D	encoded by transcript ACA1_365430A; WD domain, G-beta repeat-containing protein	join(278910..278994,279027..279096,279151..279327,279429..279550,279641..279762,279885..279993,280029..280213,280353..280453,280566..280742,280816..280906,281074..281204,281308..281383,281471..281657,281767..281919,282021..282063,282147..282186,282325..282493,282569..282708,282772..282852,282946..283018,283088..283444,283547..283683,283796..284020,284125..284367)	Acanthamoeba castellanii str. Neff	14914528
ACA1_365660	CDS	ACA1_365660	NW_004457343.1	288339	289033	R	encoded by transcript ACA1_365660A; uncharacterized protein	complement(join(288339..288349,288472..288831,288853..>289033))	Acanthamoeba castellanii str. Neff	14914492
ACA1_365670	CDS	ACA1_365670	NW_004457343.1	289130	290585	R	encoded by transcript ACA1_365670A; carbonate dehydratase	complement(join(289130..289324,289435..289553,289690..289808,290002..290093,290165..290273,290378..290427,290535..290585))	Acanthamoeba castellanii str. Neff	14914493
ACA1_365680	CDS	ACA1_365680	NW_004457343.1	290744	293810	R	encoded by transcript ACA1_365680A; NADPHdependent flavin reductase	complement(join(290744..290888,290994..291088,291165..291301,291401..291437,291461..291541,291692..291808,291898..292047,292142..292311,292410..292534,292618..292749,293001..293102,293195..293391,293487..293576,293667..293810))	Acanthamoeba castellanii str. Neff	14914494
ACA1_365690	CDS	ACA1_365690	NW_004457343.1	293906	297261	D	encoded by transcript ACA1_365690A; SAP domain containing protein	join(293906..294325,294406..295648,295666..295835,295882..296602,296625..297036,297102..297261)	Acanthamoeba castellanii str. Neff	14914495
ACA1_365700	CDS	ACA1_365700	NW_004457343.1	297616	298317	D	encoded by transcript ACA1_365700A; uncharacterized protein	297616..298317	Acanthamoeba castellanii str. Neff	14914496
ACA1_365710	CDS	ACA1_365710	NW_004457343.1	298619	304467	R	encoded by transcript ACA1_365710A; protein kinase domain containing protein	complement(join(298619..298887,299004..299100,299188..299364,299448..299644,299729..299836,299944..300022,300111..300657,300737..300816,300921..301242,301327..302389,302481..302716,302827..302949,303048..303167,303279..303535,303631..303784,303883..304079,304321..304467))	Acanthamoeba castellanii str. Neff	14914497
ACA1_365720	CDS	ACA1_365720	NW_004457343.1	305045	306759	D	encoded by transcript ACA1_365720A; 26S proteasome AAAATPase subunit RPT2a, putative	join(305045..305213,305281..305591,305810..306322,306415..306759)	Acanthamoeba castellanii str. Neff	14914498
ACA1_365730	CDS	ACA1_365730	NW_004457343.1	307092	310532	D	encoded by transcript ACA1_365730A; tetratricopeptide repeat domain containing protein	join(307092..308132,308228..308461,308578..308796,308871..309116,309224..309359,309435..310258,310356..310532)	Acanthamoeba castellanii str. Neff	14914499
ACA1_365740	CDS	ACA1_365740	NW_004457343.1	310827	311447	R	encoded by transcript ACA1_365740A; uncharacterized protein	complement(join(310827..310976,311067..311447))	Acanthamoeba castellanii str. Neff	14914500
ACA1_365750	CDS	ACA1_365750	NW_004457343.1	311959	312628	D	encoded by transcript ACA1_365750A; EF hand domain containing protein	join(311959..312064,312152..312199,312286..312430,312445..312628)	Acanthamoeba castellanii str. Neff	14914626
ACA1_365760	CDS	ACA1_365760	NW_004457343.1	312889	313699	R	encoded by transcript ACA1_365760A; glutathione peroxidase Hyr1, putative	complement(join(312889..312990,313075..313209,313303..313385,313441..313531,313616..313699))	Acanthamoeba castellanii str. Neff	14914627
ACA1_365780	CDS	ACA1_365780	NW_004457343.1	320003	320569	D	encoded by transcript ACA1_365780A; ribosomal protein S4, putative	<320003..320569	Acanthamoeba castellanii str. Neff	14914629
ACA1_365790	CDS	ACA1_365790	NW_004457343.1	320706	321528	R	encoded by transcript ACA1_365790A; uncharacterized protein	complement(join(320706..321024,321077..321287,321352..321452,321509..321528))	Acanthamoeba castellanii str. Neff	14914630
ACA1_365800	CDS	ACA1_365800	NW_004457343.1	322458	328423	D	encoded by transcript ACA1_365800A; ATPase/histidine kinase/DNA gyrase B/HSP90 domain containing protein	join(322458..322810,322915..323085,323180..323366,323547..323726,323820..324143,324214..324793,324894..325025,325085..325136,325387..325771,326043..326167,326278..326459,326532..326755,326837..327026,327131..327171,327251..328019,328083..328264,328346..328423)	Acanthamoeba castellanii str. Neff	14914631
ACA1_365810	CDS	ACA1_365810	NW_004457343.1	328824	329477	D	encoded by transcript ACA1_365810A; Hypothetical protein	join(328824..329187,329257..329477)	Acanthamoeba castellanii str. Neff	14914632
ACA1_365820	CDS	ACA1_365820	NW_004457343.1	329554	331518	R	encoded by transcript ACA1_365820A; PHDfinger domain containing protein	complement(join(329554..329991,330106..330238,330307..330444,330531..330804,330881..331091,331192..331518))	Acanthamoeba castellanii str. Neff	14914633
ACA1_365830	CDS	ACA1_365830	NW_004457343.1	331786	333657	D	encoded by transcript ACA1_365830A; uncharacterized protein	join(331786..331908,331993..332087,332207..332396,332444..332600,332685..332801,332987..333111,333186..333314,333505..333657)	Acanthamoeba castellanii str. Neff	14914634
ACA1_365840	CDS	ACA1_365840	NW_004457343.1	333764	334983	R	encoded by transcript ACA1_365840A; uncharacterized protein	complement(join(333764..334667,334745..334983))	Acanthamoeba castellanii str. Neff	14914635
ACA1_365850	CDS	ACA1_365850	NW_004457343.1	335535	336186	R	encoded by transcript ACA1_365850A; uncharacterized protein	complement(join(335535..335636,335706..335786,336055..336186))	Acanthamoeba castellanii str. Neff	14914636
ACA1_365860	CDS	ACA1_365860	NW_004457343.1	336516	337896	R	encoded by transcript ACA1_365860A; cytoplasmic protein, putative	complement(join(336516..337092,337202..337284,337438..337612,337712..337896))	Acanthamoeba castellanii str. Neff	14914637
ACA1_365870	CDS	ACA1_365870	NW_004457343.1	338070	339427	R	encoded by transcript ACA1_365870A; CBS domain containing protein	complement(join(338070..338189,338262..338507,338576..338665,338721..338842,338918..338995,339068..339237,339301..339374,339407..339427))	Acanthamoeba castellanii str. Neff	14914638
ACA1_365880	CDS	ACA1_365880	NW_004457343.1	340036	343501	R	encoded by transcript ACA1_365880A; protein kinase domain containing protein	complement(join(340036..340803,340846..340978,341070..341146,341209..341276,341380..341438,341511..341612,341681..341777,341847..342156,342231..342325,342415..342547,342639..342779,342869..343008,343067..343157,343253..343501))	Acanthamoeba castellanii str. Neff	14914660
ACA1_366090	CDS	ACA1_366090	NW_004457343.1	345469	347006	R	encoded by transcript ACA1_366090A; RNA polymerase III subunit RPC82 helixturn-helix domain containing protein	complement(join(345469..345486,345555..345652,345717..345828,345942..346073,346157..346383,346448..346529,346596..346853,346947..347006))	Acanthamoeba castellanii str. Neff	14914661
ACA1_366100	CDS	ACA1_366100	NW_004457343.1	348458	349370	R	encoded by transcript ACA1_366100A; zinc knuckle domain containing protein	complement(join(348458..348605,348662..348735,348800..348866,348994..349076,349132..349270,349345..349370))	Acanthamoeba castellanii str. Neff	14914662
ACA1_366110	CDS	ACA1_366110	NW_004457343.1	349750	351236	D	encoded by transcript ACA1_366110A; MPPN (rrmlike) domain containing protein	join(349750..349813,349878..349954,350020..350066,350151..350345,350419..350476,350547..350765,350899..351065,351149..351236)	Acanthamoeba castellanii str. Neff	14914663
ACA1_366120	CDS	ACA1_366120	NW_004457343.1	351897	357476	D	encoded by transcript ACA1_366120A; SNF2 family Nterminal domain containing protein	join(351897..351914,351935..352102,352184..352274,352445..352551,352607..352707,352778..352877,352954..353871,353956..354175,354268..354413,354491..354586,354698..354832,354956..355123,355229..355382,355482..355654,355760..355942,356089..356316,356328..356469,356541..356755,356851..357123,357231..357476)	Acanthamoeba castellanii str. Neff	14914664
ACA1_366130	CDS	ACA1_366130	NW_004457343.1	357959	358737	D	encoded by transcript ACA1_366130A; NHL repeatcontaining protein	join(357959..358209,358287..358737)	Acanthamoeba castellanii str. Neff	14914665
ACA1_366140	CDS	ACA1_366140	NW_004457343.1	358844	361148	R	encoded by transcript ACA1_366140A; F-box domain containing protein	complement(join(358844..358925,359001..359037,359118..359193,359268..359349,359735..359887,359971..360196,360268..360369,360504..360614,360689..360821,360884..361039,361122..361148))	Acanthamoeba castellanii str. Neff	14914666
ACA1_366150	CDS	ACA1_366150	NW_004457343.1	361229	364264	R	encoded by transcript ACA1_366150A; tRNA methyltransferase, putative	complement(join(361229..361484,361587..361683,361802..361918,362028..362121,362155..362477,362626..362775,362879..362916,362984..363161,363245..363455,363537..363755,363868..364115,364201..364264))	Acanthamoeba castellanii str. Neff	14914667
ACA1_366160	CDS	ACA1_366160	NW_004457343.1	364492	367863	D	encoded by transcript ACA1_366160A; vacuolar protein sortingassociated protein 45, putative	join(364492..364542,364624..364731,364826..364913,365056..365135,365224..365290,365380..365428,365518..365611,365764..365840,366005..366131,366238..366324,366400..366454,366572..366750,366873..366955,367041..367122,367223..367333,367440..367496,367585..367863)	Acanthamoeba castellanii str. Neff	14914668
ACA1_366170	CDS	ACA1_366170	NW_004457343.1	368075	369666	R	encoded by transcript ACA1_366170A; pirin domain protein	complement(join(368075..368231,368361..368552,368701..368897,369053..369270,369286..369425,369501..369568,369661..369666))	Acanthamoeba castellanii str. Neff	14914669
ACA1_366180	CDS	ACA1_366180	NW_004457343.1	370121	371357	R	encoded by transcript ACA1_366180A; uncharacterized protein	complement(join(370121..370285,370423..370577,370644..370872,370963..371147,371255..371357))	Acanthamoeba castellanii str. Neff	14914541
ACA1_366190	CDS	ACA1_366190	NW_004457343.1	371889	374223	R	encoded by transcript ACA1_366190A; PB1 domain containing protein	complement(join(371889..372041,372158..372465,372670..372769,372891..373027,373109..373457,373608..373777,373871..373983,374066..374223))	Acanthamoeba castellanii str. Neff	14914542
ACA1_366210	CDS	ACA1_366210	NW_004457343.1	375938	377350	R	encoded by transcript ACA1_366210A; pirin cterminal region domain containing protein	complement(join(375938..376280,376373..376590,376673..376850,376942..377058,377136..377350))	Acanthamoeba castellanii str. Neff	14914544
ACA1_366220	CDS	ACA1_366220	NW_004457343.1	377754	378894	D	encoded by transcript ACA1_366220A; uncharacterized protein	join(377754..378220,378330..378408,378574..378663,378742..378894)	Acanthamoeba castellanii str. Neff	14914545
ACA1_366230	CDS	ACA1_366230	NW_004457343.1	379086	379620	D	encoded by transcript ACA1_366230A; universal stress domain containing protein	join(379086..379311,379400..379620)	Acanthamoeba castellanii str. Neff	14914546
ACA1_366240	CDS	ACA1_366240	NW_004457343.1	379723	380622	R	encoded by transcript ACA1_366240A; uncharacterized protein	complement(join(379723..380076,380117..380302,380389..380622))	Acanthamoeba castellanii str. Neff	14914547
ACA1_366250	CDS	ACA1_366250	NW_004457343.1	380876	382405	R	encoded by transcript ACA1_366250A; oxidoreductase, short chain dehydrogenase/reductase superfamily protein	complement(join(380876..380980,381055..381166,381283..381409,381488..381689,381763..381824,381929..382088,382187..382405))	Acanthamoeba castellanii str. Neff	14914548
ACA1_366260	CDS	ACA1_366260	NW_004457343.1	382577	385057	R	encoded by transcript ACA1_366260A; serine carboxypeptidase (CBP1), putative	complement(join(382577..382639,382738..382922,383008..383093,383174..383256,383351..383425,383493..383581,383655..383740,383831..383966,384057..384072,384186..384325,384414..384519,384615..384649,384725..384835,384910..385057))	Acanthamoeba castellanii str. Neff	14914549
ACA1_366270	CDS	ACA1_366270	NW_004457343.1	385472	386350	D	encoded by transcript ACA1_366270A; acetyltransferase, GNAT superfamily protein	join(385472..385583,385657..385771,385848..385885,385977..386075,386178..386350)	Acanthamoeba castellanii str. Neff	14914550
ACA1_366280	CDS	ACA1_366280	NW_004457343.1	386428	386976	R	encoded by transcript ACA1_366280A; LYR motifcontaining protein 5, putative	complement(join(386428..386453,386536..386668,386741..386863,386929..386976))	Acanthamoeba castellanii str. Neff	14914551
ACA1_366290	CDS	ACA1_366290	NW_004457343.1	387253	387713	D	encoded by transcript ACA1_366290A; uncharacterized protein	join(387253..387333,387376..387412,387474..387549,387587..387713)	Acanthamoeba castellanii str. Neff	14914552
ACA1_366300	CDS	ACA1_366300	NW_004457343.1	387784	388558	D	encoded by transcript ACA1_366300A; peptidylprolyl cis-trans isomerase e, ppie, putative	join(387784..387829,387938..388036,388174..388320,388455..388558)	Acanthamoeba castellanii str. Neff	14914575
ACA1_366310	CDS	ACA1_366310	NW_004457343.1	388896	390202	D	encoded by transcript ACA1_366310A; reticulon protein	join(388896..388983,389190..389206,389353..389531,389643..389781,389863..389932,390051..390202)	Acanthamoeba castellanii str. Neff	14914576
ACA1_366320	CDS	ACA1_366320	NW_004457343.1	390668	393654	D	encoded by transcript ACA1_366320A; uncharacterized protein	join(390668..391216,391303..391478,391551..393654)	Acanthamoeba castellanii str. Neff	14914577
ACA1_366330	CDS	ACA1_366330	NW_004457343.1	393990	394307	D	encoded by transcript ACA1_366330A; uncharacterized protein	393990..394307	Acanthamoeba castellanii str. Neff	14914578
ACA1_366340	CDS	ACA1_366340	NW_004457343.1	394747	399183	D	encoded by transcript ACA1_366340A; uncharacterized protein	join(394747..395032,395103..395278,395424..395547,395637..395800,395909..396111,396232..396301,396493..396668,396749..396874,396938..397018,397137..397211,397314..397450,397564..397627,397716..397830,397938..398111,398190..398303,398424..398573,398678..398785,398847..398983,399102..399183)	Acanthamoeba castellanii str. Neff	14914579
ACA1_366350	CDS	ACA1_366350	NW_004457343.1	399454	400732	R	encoded by transcript ACA1_366350A; MTA70 family protein	complement(join(399454..399527,399644..399873,399980..400125,400229..400378,400400..400458,400522..400732))	Acanthamoeba castellanii str. Neff	14914580
ACA1_366360	CDS	ACA1_366360	NW_004457343.1	401651	402115	D	encoded by transcript ACA1_366360A; uncharacterized protein	join(401651..401681,401790..401859,401923..402115)	Acanthamoeba castellanii str. Neff	14914581
ACA1_366370	CDS	ACA1_366370	NW_004457343.1	402591	403468	D	encoded by transcript ACA1_366370A; uncharacterized protein	join(402591..403127,403226..403468)	Acanthamoeba castellanii str. Neff	14914582
ACA1_366380	CDS	ACA1_366380	NW_004457343.1	403707	404151	R	encoded by transcript ACA1_366380A; acetyltransferase	complement(join(403707..403737,403769..403894,403982..404151))	Acanthamoeba castellanii str. Neff	14914583
ACA1_366390	CDS	ACA1_366390	NW_004457343.1	404344	407626	R	encoded by transcript ACA1_366390A; transporter dicarboxylate, putative	complement(join(404344..404473,404699..404777,404878..405021,405104..405200,405353..405421,405491..405582,405661..405781,405916..406001,406273..406374,406449..406547,406645..406803,406870..406980,407099..407263,407377..407626))	Acanthamoeba castellanii str. Neff	14914584
ACA1_366400	CDS	ACA1_366400	NW_004457343.1	407747	411325	R	encoded by transcript ACA1_366400A; emp24/gp25L/p24 family protein	complement(join(407747..407871,407976..408093,408220..408385,408469..408562,408679..408799,408884..409000,409213..409439,409542..409675,409792..409885,409975..410134,410209..410313,410400..410528,410653..410732,410813..410982,411017..411083,411175..411229,411296..411325))	Acanthamoeba castellanii str. Neff	14914585
ACA1_366410	CDS	ACA1_366410	NW_004457343.1	411640	414995	R	encoded by transcript ACA1_366410A; ATPase/histidine kinase/DNA gyrase B/HSP90 domain containing protein	complement(join(411640..411921,412000..412388,412503..412982,413108..413234,413316..413441,413539..413812,413925..414690,414830..414995))	Acanthamoeba castellanii str. Neff	14914586
ACA1_366420	CDS	ACA1_366420	NW_004457343.1	416081	419343	D	encoded by transcript ACA1_366420A; GTPbinding protein LepA, putative	join(416081..416093,416171..416319,416425..416523,416618..416696,416788..416914,417011..417123,417266..417356,417477..417606,417710..417819,417890..417968,418047..418095,418205..418353,418467..418762,418893..418952,419056..419200,419260..419343)	Acanthamoeba castellanii str. Neff	14914509
ACA1_366430	CDS	ACA1_366430	NW_004457343.1	419482	422374	R	encoded by transcript ACA1_366430A; fumarate hydratase	complement(join(419482..419687,419781..419865,419944..420008,420116..420288,420388..420512,420611..420728,420820..421020,421121..421336,421432..421570,421660..421766,421912..422043,422184..422374))	Acanthamoeba castellanii str. Neff	14914510
ACA1_366440	CDS	ACA1_366440	NW_004457343.1	423242	430899	D	encoded by transcript ACA1_366440A; uncharacterized protein	join(423242..423348,423548..423684,423917..424067,424174..424369,424501..424616,424737..424877,424973..425183,425238..425354,425503..425568,425669..425786,425866..425989,426156..426264,426366..426539,426603..426715,426822..426984,427095..427213,427360..427538,427641..427796,427881..428209,428314..428493,428570..428760,428929..429211,429303..429426,429517..429646,429747..429909,430059..430265,430336..430500,430624..430899)	Acanthamoeba castellanii str. Neff	14914511
ACA1_366450	CDS	ACA1_366450	NW_004457343.1	430961	433050	R	encoded by transcript ACA1_366450A; serine-tRNA ligase domain containing protein	complement(join(430961..431196,431284..431468,431590..431717,431809..431961,432075..432278,432352..433050))	Acanthamoeba castellanii str. Neff	14914512
ACA1_366460	CDS	ACA1_366460	NW_004457343.1	433434	434341	D	encoded by transcript ACA1_366460A; dynactin subunit 6, putative	join(<433434..433572,433642..433689,433755..433823,433895..434105,434242..434341)	Acanthamoeba castellanii str. Neff	14914513
ACA1_366470	CDS	ACA1_366470	NW_004457343.1	434392	435326	R	encoded by transcript ACA1_366470A; trichohyalin, putative	complement(join(434392..434525,434634..434984,435061..435126,435188..435326))	Acanthamoeba castellanii str. Neff	14914514
ACA1_366480	CDS	ACA1_366480	NW_004457343.1	435574	437164	D	encoded by transcript ACA1_366480A; protein kinase domain containing protein	join(435574..435752,435827..435975,436046..436131,436224..436333,436450..436601,436686..437164)	Acanthamoeba castellanii str. Neff	14914515
ACA1_366490	CDS	ACA1_366490	NW_004457343.1	437601	440236	D	encoded by transcript ACA1_366490A; pentatricopeptide repeat domain containing protein	join(437601..437676,437715..437957,438029..438137,438249..438312,438454..438591,438692..438918,439025..439105,439237..439768,439877..440236)	Acanthamoeba castellanii str. Neff	14914516
ACA1_366500	CDS	ACA1_366500	NW_004457343.1	440740	441833	R	encoded by transcript ACA1_366500A; nuclear transport factor 2 (ntf2) domain containing protein	complement(join(440740..440841,440922..441026,441157..441228,441306..441407,441475..441605,441734..>441833))	Acanthamoeba castellanii str. Neff	14914478
ACA1_366510	CDS	ACA1_366510	NW_004457343.1	442396	446036	D	encoded by transcript ACA1_366510A; lipase	join(442396..442915,443017..443143,443235..443335,443420..443472,443574..443657,443756..444018,444120..444271,444434..444487,444580..444711,444802..444918,445019..445144,445261..446036)	Acanthamoeba castellanii str. Neff	14914479
ACA1_366520	CDS	ACA1_366520	NW_004457343.1	446257	446858	D	encoded by transcript ACA1_366520A; uncharacterized protein	join(446257..446430,446500..446577,446655..446858)	Acanthamoeba castellanii str. Neff	14914480
ACA1_366530	CDS	ACA1_366530	NW_004457343.1	446890	449025	R	encoded by transcript ACA1_366530A; uncharacterized protein	complement(join(446890..447032,447115..447180,447243..447336,447448..448495,448612..448674,448739..449025))	Acanthamoeba castellanii str. Neff	14914481
ACA1_366540	CDS	ACA1_366540	NW_004457343.1	449569	450924	D	encoded by transcript ACA1_366540A; uncharacterized protein	join(449569..449646,449738..449907,449999..450111,450210..450404,450479..450924)	Acanthamoeba castellanii str. Neff	14914482
ACA1_366550	CDS	ACA1_366550	NW_004457343.1	451341	452441	R	encoded by transcript ACA1_366550A; Ras subfamily protein	complement(join(451341..451578,451698..451891,451968..452029,452345..452441))	Acanthamoeba castellanii str. Neff	14914483
ACA1_366560	CDS	ACA1_366560	NW_004457343.1	453163	454672	R	encoded by transcript ACA1_366560A; Ras subfamily protein	complement(join(453163..453301,453462..453604,453663..453760,453862..453955,454043..454146,454236..454344,454438..454527,454589..454672))	Acanthamoeba castellanii str. Neff	14914484
ACA1_366570	CDS	ACA1_366570	NW_004457343.1	454800	457167	R	encoded by transcript ACA1_366570A; cation efflux family superfamily protein	complement(join(454800..454922,455014..455121,455212..455333,455359..455519,455620..455699,455730..455835,455931..456056,456150..456227,456310..456335,456416..456532,456678..456838,456915..457167))	Acanthamoeba castellanii str. Neff	14914485
ACA1_366580	CDS	ACA1_366580	NW_004457343.1	457401	457826	D	encoded by transcript ACA1_366580A; large adhesin, putative	457401..457826	Acanthamoeba castellanii str. Neff	14914486
ACA1_366590	CDS	ACA1_366590	NW_004457343.1	457942	459891	R	encoded by transcript ACA1_366590A; regulator of chromosome condensation (RCC1) repeat domain containing protein	complement(join(457942..458138,458227..458361,458443..458584,458680..458831,458917..458958,459025..459139,459218..459307,459395..459483,459681..459891))	Acanthamoeba castellanii str. Neff	14914487
ACA1_366600	CDS	ACA1_366600	NW_004457343.1	460114	462367	D	encoded by transcript ACA1_366600A; xylulose kinase	join(460114..460569,460651..460772,460857..460990,461099..461255,461331..461441,461527..461726,461794..462166,462244..462367)	Acanthamoeba castellanii str. Neff	14914488
ACA1_366610	CDS	ACA1_366610	NW_004457343.1	462544	463022	D	encoded by transcript ACA1_366610A; DNAbinding protein HU superfamily protein	join(462544..462725,462821..463022)	Acanthamoeba castellanii str. Neff	14914489
ACA1_366620	CDS	ACA1_366620	NW_004457343.1	464041	467662	R	encoded by transcript ACA1_366620A; M protein repeat-containing protein	complement(join(464041..467106,467424..467495,467639..467662))	Acanthamoeba castellanii str. Neff	14914553
ACA1_366630	CDS	ACA1_366630	NW_004457343.1	468259	470989	D	encoded by transcript ACA1_366630A; PH domain containing protein	join(468259..468387,468516..468593,468694..469775,469898..470088,470340..470713,470834..470989)	Acanthamoeba castellanii str. Neff	14914554
ACA1_366640	CDS	ACA1_366640	NW_004457343.1	471216	472296	D	encoded by transcript ACA1_366640A; carrier superfamily protein	join(471216..471842,471930..472117,472182..472296)	Acanthamoeba castellanii str. Neff	14914555
ACA1_366650	CDS	ACA1_366650	NW_004457343.1	472411	473323	R	encoded by transcript ACA1_366650A; NAD(P)H:quinone oxidoreductase, type IV, putative	complement(join(472411..472589,472686..472974,473080..473231,473299..473323))	Acanthamoeba castellanii str. Neff	14914556
ACA1_366660	CDS	ACA1_366660	NW_004457343.1	473756	475375	R	encoded by transcript ACA1_366660A; Nocturnin, putative	complement(join(473756..473977,474057..474418,474479..474745,474857..475146,475215..475375))	Acanthamoeba castellanii str. Neff	14914557
ACA1_366670	CDS	ACA1_366670	NW_004457343.1	475468	479106	R	encoded by transcript ACA1_366670A; kinesin motor domain containing protein	complement(join(475468..475746,475854..475940,476010..476380,476464..476531,476618..476745,476789..476959,477099..477128,477219..477659,477788..478031,478190..478414,478510..478635,478707..478759,478888..479106))	Acanthamoeba castellanii str. Neff	14914558
ACA1_366680	CDS	ACA1_366680	NW_004457343.1	479692	480239	D	encoded by transcript ACA1_366680A; aspartyl aminopeptidase	join(479692..480003,480097..480153,480195..480239)	Acanthamoeba castellanii str. Neff	14914559
ACA1_366690	CDS	ACA1_366690	NW_004457343.1	480252	482003	D	encoded by transcript ACA1_366690A; aspartyl aminopeptidase	join(480252..480349,480444..480521,480600..480719,480810..480892,480963..481090,481206..481294,481392..481553,481643..482003)	Acanthamoeba castellanii str. Neff	14914560
ACA1_366700	CDS	ACA1_366700	NW_004457343.1	482129	483820	R	encoded by transcript ACA1_366700A; uncharacterized protein	complement(join(482129..482965,483055..483687,483782..483820))	Acanthamoeba castellanii str. Neff	14914561
ACA1_366710	CDS	ACA1_366710	NW_004457343.1	484020	489784	R	encoded by transcript ACA1_366710A; DNA gyrase/topoisomerase IV, A subunit	complement(join(484020..485144,485236..485352,485433..485753,485817..486050,486138..486323,486398..486674,486749..487116,487191..487460,487549..487662,487755..488167,488239..489060,489141..489522,489734..489784))	Acanthamoeba castellanii str. Neff	14914562
ACA1_366720	CDS	ACA1_366720	NW_004457343.1	489960	490538	R	encoded by transcript ACA1_366720A; Calmodulin, putative	complement(join(489960..490135,490199..490270,490337..490538))	Acanthamoeba castellanii str. Neff	14914563
ACA1_366730	CDS	ACA1_366730	NW_004457343.1	490848	492401	R	encoded by transcript ACA1_366730A; uncharacterized protein	complement(490848..492401)	Acanthamoeba castellanii str. Neff	14914564
ACA1_366740	CDS	ACA1_366740	NW_004457343.1	493461	494703	D	encoded by transcript ACA1_366740A; hydroxyacylglutathione hydrolase	join(493461..493509,493609..493815,493902..494005,494284..494412,494503..494703)	Acanthamoeba castellanii str. Neff	14914639
ACA1_366750	CDS	ACA1_366750	NW_004457343.1	494796	497284	R	encoded by transcript ACA1_366750A; KH domain containing protein	complement(join(494796..495311,495446..495547,495651..495723,495797..496086,496155..496331,496424..496550,496632..496776,496858..496965,497032..497284))	Acanthamoeba castellanii str. Neff	14914640
ACA1_366760	CDS	ACA1_366760	NW_004457343.1	497369	498357	R	encoded by transcript ACA1_366760A; RNA recognition motif domain containing protein	complement(join(497369..497645,497712..497868,497938..498060,498126..498212,498282..498357))	Acanthamoeba castellanii str. Neff	14914641
ACA1_366770	CDS	ACA1_366770	NW_004457343.1	498631	503903	R	encoded by transcript ACA1_366770A; SPRY domain containing protein	complement(join(498631..498756,498819..498973,499051..499152,499225..499362,499439..499548,499636..499736,499799..499990,500062..500276,500312..500389,500485..500656,500776..500832,500899..501022,501108..501377,501454..501614,501675..501811,501885..502029,502097..502197,502228..502234,502318..502403,502482..502605,502682..503087,503161..503677,503759..503903))	Acanthamoeba castellanii str. Neff	14914642
ACA1_366780	CDS	ACA1_366780	NW_004457343.1	504812	505435	D	encoded by transcript ACA1_366780A; protein rft1 family protein	join(504812..504860,504943..505022,505134..505207,505276..>505435)	Acanthamoeba castellanii str. Neff	14914643
ACA1_366890	CDS	ACA1_366890	NW_004457343.1	506940	507671	R	encoded by transcript ACA1_366890A; lipase	complement(join(506940..507526,507638..507671))	Acanthamoeba castellanii str. Neff	14914644
ACA1_366900	CDS	ACA1_366900	NW_004457343.1	508071	510730	D	encoded by transcript ACA1_366900A; protein kinase domain containing protein	join(508071..508181,508203..508357,508435..508510,508634..508772,508844..508901,508978..509136,509223..509387,509553..509786,509885..510018,510118..510281,510368..510730)	Acanthamoeba castellanii str. Neff	14914645
ACA1_366920	CDS	ACA1_366920	NW_004457343.1	513923	516184	R	encoded by transcript ACA1_366920A; Serine/threonineprotein kinase 3, putative	complement(join(513923..514342,514445..514534,514653..514796,514870..514989,515084..515160,515390..515450,515555..515653,515812..516007,516129..516184))	Acanthamoeba castellanii str. Neff	14914647
ACA1_366930	CDS	ACA1_366930	NW_004457343.1	516436	518572	D	encoded by transcript ACA1_366930A; tryptophan-tRNA ligase	join(516436..516501,516724..516828,516931..517092,517349..517428,517532..517614,517738..517898,518030..518102,518196..518317,518423..518572)	Acanthamoeba castellanii str. Neff	14914648
ACA1_366940	CDS	ACA1_366940	NW_004457343.1	518616	522282	R	encoded by transcript ACA1_366940A; BTB/POZ domain containing protein	complement(join(518616..518913,519037..519166,519312..519853,519933..520029,520115..520165,520264..520374,520491..520646,520776..520870,520962..521022,521164..521274,521410..521564,521712..521802,521931..522282))	Acanthamoeba castellanii str. Neff	14914649
ACA1_366950	CDS	ACA1_366950	NW_004457343.1	522430	524249	R	encoded by transcript ACA1_366950A; uncharacterized protein	complement(join(522430..522814,523009..523213,523321..523847,523960..524184,524221..524249))	Acanthamoeba castellanii str. Neff	14914501
ACA1_366960	CDS	ACA1_366960	NW_004457343.1	524357	531678	R	encoded by transcript ACA1_366960A; protein kinase domain containing protein	complement(join(524357..524452,524541..524700,524791..524942,525027..525232,525300..525508,525628..525761,525889..525904,526025..526085,526151..526268,526408..526581,526614..526747,526850..527008,527133..527473,527587..527767,527848..527927,528000..528091,528192..528465,528578..528752,528846..529023,529107..529325,529440..529623,529682..529785,529841..530021,530122..530245,530348..530461,530536..530596,530755..530928,531002..531054,531121..531180,531229..531489,531594..531678))	Acanthamoeba castellanii str. Neff	14914502
ACA1_366970	CDS	ACA1_366970	NW_004457343.1	533257	533570	D	encoded by transcript ACA1_366970A; uncharacterized protein	join(533257..533307,533388..533570)	Acanthamoeba castellanii str. Neff	14914503
ACA1_366980	CDS	ACA1_366980	NW_004457343.1	533796	536315	R	encoded by transcript ACA1_366980A; uncharacterized protein	complement(join(533796..533903,533998..534090,534178..534365,534447..534647,534725..534836,534906..535028,535093..535320,535402..535506,535591..535668,535735..535930,536026..536315))	Acanthamoeba castellanii str. Neff	14914504
ACA1_366990	CDS	ACA1_366990	NW_004457343.1	536833	539085	R	encoded by transcript ACA1_366990A; Hypothetical protein	complement(join(536833..536964,537058..537202,537272..537400,537440..537575,537669..537803,537892..537996,538089..538248,538326..538432,538532..538649,538760..538841,538919..539020,539075..539085))	Acanthamoeba castellanii str. Neff	14914505
ACA1_367000	CDS	ACA1_367000	NW_004457343.1	539627	545183	D	encoded by transcript ACA1_367000A; Hypothetical protein	join(539627..539701,539761..539908,539967..540048,540241..540251,540688..540737,540797..540944,541005..541086,541534..541668,541737..541796,541940..542027,542085..542160,542267..542343,542418..542539,542614..542843,542948..542963,543061..543200,543289..543436,543523..543585,543681..543844,543913..544036,544054..544067,544358..544444,544529..544633,544673..544794,544878..545001,545077..545183)	Acanthamoeba castellanii str. Neff	14914506
ACA1_367110	CDS	ACA1_367110	NW_004457343.1	545336	550441	R	encoded by transcript ACA1_367110A; RhoGEF domain containing protein	complement(join(545336..546682,546801..547029,547179..547280,547410..547452,547463..547528,547639..547770,547859..547979,548128..548236,548310..548494,548567..548682,548760..548847,548923..548979,549071..550441))	Acanthamoeba castellanii str. Neff	14914507
ACA1_367120	CDS	ACA1_367120	NW_004457343.1	550789	552667	R	encoded by transcript ACA1_367120A; tetratricopeptide repeat domain containing protein	complement(join(550789..550883,550958..551039,551139..551313,551426..551564,551654..551756,551851..551952,552032..552115,552184..552306,552366..552484,552556..552667))	Acanthamoeba castellanii str. Neff	14914508
ACA1_367130	CDS	ACA1_367130	NW_004457343.1	552884	555170	D	encoded by transcript ACA1_367130A; uncharacterized protein	join(552884..552999,553079..553134,553198..553374,553448..553587,553669..553754,553840..553928,554071..554172,554260..554351,554414..554566,554641..554732,554809..554917,555018..555170)	Acanthamoeba castellanii str. Neff	14914465
ACA1_367140	CDS	ACA1_367140	NW_004457343.1	555678	555993	D	encoded by transcript ACA1_367140A; uncharacterized protein	join(555678..555924,555935..555993)	Acanthamoeba castellanii str. Neff	14914466
ACA1_367150	CDS	ACA1_367150	NW_004457343.1	556225	557759	R	encoded by transcript ACA1_367150A; acyltransferase domain containing protein	complement(join(556225..556253,556300..556436,556523..556752,556839..556945,557011..557093,557193..557362,557445..557591,557658..557759))	Acanthamoeba castellanii str. Neff	14914467
ACA1_367160	CDS	ACA1_367160	NW_004457343.1	558340	559453	D	encoded by transcript ACA1_367160A; zinc finger domain containing protein	join(558340..558678,559145..559453)	Acanthamoeba castellanii str. Neff	14914468
ACA1_367170	CDS	ACA1_367170	NW_004457343.1	559617	559811	R	encoded by transcript ACA1_367170A; uncharacterized protein	complement(559617..559811)	Acanthamoeba castellanii str. Neff	14914469
ACA1_367180	CDS	ACA1_367180	NW_004457343.1	561722	565444	R	encoded by transcript ACA1_367180A; MIF4G domain containing protein	complement(join(561722..561804,561865..562053,562116..562268,562321..562553,562775..562979,563061..563214,563309..563525,563595..564157,564241..564504,564813..564854,564876..564967,565034..565070,565137..565271,565331..565444))	Acanthamoeba castellanii str. Neff	14914470
ACA1_367190	CDS	ACA1_367190	NW_004457343.1	565769	569761	D	encoded by transcript ACA1_367190A; RhoGEF domain containing protein	join(565769..566363,566436..566524,566613..566867,566937..567059,567146..567325,567396..567653,567714..567834,567915..568041,568104..568229,568303..568566,568635..568698,568771..568855,568923..569761)	Acanthamoeba castellanii str. Neff	14914471
ACA1_367200	CDS	ACA1_367200	NW_004457343.1	570431	571101	D	encoded by transcript ACA1_367200A; uncharacterized protein	join(570431..570611,570679..570786,570856..570926,571000..571101)	Acanthamoeba castellanii str. Neff	14914472
ACA1_367210	CDS	ACA1_367210	NW_004457343.1	571275	572655	D	encoded by transcript ACA1_367210A; RhoGAP domain containing protein	join(571275..571294,571370..571538,571627..571788,571867..572155,572255..572338,572528..572655)	Acanthamoeba castellanii str. Neff	14914473
ACA1_367220	CDS	ACA1_367220	NW_004457343.1	573223	574001	D	encoded by transcript ACA1_367220A; uncharacterized protein	join(573223..573263,573286..573358,573421..573660,573724..573759,573822..574001)	Acanthamoeba castellanii str. Neff	14914474
ACA1_367230	CDS	ACA1_367230	NW_004457343.1	574383	575914	D	encoded by transcript ACA1_367230A; uncharacterized protein	join(574383..574395,574457..574508,574602..574618,574682..575328,575396..575914)	Acanthamoeba castellanii str. Neff	14914475
ACA1_367240	CDS	ACA1_367240	NW_004457343.1	576388	578339	D	encoded by transcript ACA1_367240A; uncharacterized protein	join(576388..576504,576516..576705,576765..577645,577658..577738,577755..578339)	Acanthamoeba castellanii str. Neff	14914565
ACA1_367250	CDS	ACA1_367250	NW_004457343.1	578229	580540	R	encoded by transcript ACA1_367250A; uncharacterized protein	complement(join(578229..578622,578691..578757,578817..578987,579075..579392,579462..579627,579676..579801,579860..580004,580064..580215,580277..580540))	Acanthamoeba castellanii str. Neff	14914566
ACA1_367260	CDS	ACA1_367260	NW_004457343.1	580756	582524	D	encoded by transcript ACA1_367260A; tRNA binding domain containing protein	join(580756..580896,580984..581166,581232..581366,581446..581590,581662..581755,581826..581916,582000..582122,582199..582303,582399..582524)	Acanthamoeba castellanii str. Neff	14914567
ACA1_367270	CDS	ACA1_367270	NW_004457343.1	582768	586776	D	encoded by transcript ACA1_367270A; peptidase, M20/M25/M40 superfamily protein	join(582768..583083,583207..583289,583371..583521,583609..583694,583784..583923,583999..584125,584253..584359,584449..584627,584711..584887,584976..585085,585175..585215,585292..586388,586478..586776)	Acanthamoeba castellanii str. Neff	14914568
ACA1_367280	CDS	ACA1_367280	NW_004457343.1	586941	588060	R	encoded by transcript ACA1_367280A; zinc finger, C3HC4 type (RING finger) domain containing protein	complement(join(586941..586984,587061..587132,587219..587441,587518..587568,587668..587771,587881..587897,587996..588060))	Acanthamoeba castellanii str. Neff	14914569
ACA1_367290	CDS	ACA1_367290	NW_004457343.1	588227	592045	R	encoded by transcript ACA1_367290A; uncharacterized protein	complement(join(588227..588435,588531..589160,589235..589627,589724..589789,589891..589968,590057..590146,590253..590324,590421..590492,590714..590872,590964..591044,591151..591222,591323..591423,591516..591654,591931..592045))	Acanthamoeba castellanii str. Neff	14914570
ACA1_367300	CDS	ACA1_367300	NW_004457343.1	592494	594595	D	encoded by transcript ACA1_367300A; GDPmannose pyrophosphorylase A isoform 3, putative	join(592494..592615,592683..592784,592894..593092,593262..593334,593411..593540,593569..593763,593876..594011,594068..594187,594283..594415,594495..594595)	Acanthamoeba castellanii str. Neff	14914571
ACA1_367310	CDS	ACA1_367310	NW_004457343.1	594678	597969	R	encoded by transcript ACA1_367310A; zinc knuckle domain containing protein	complement(join(594678..594949,594987..595398,595499..595886,595980..596383,596465..596556,596652..597006,597095..597334,597404..597531,597606..597708,597775..597969))	Acanthamoeba castellanii str. Neff	14914572
ACA1_367320	CDS	ACA1_367320	NW_004457343.1	598365	600368	R	encoded by transcript ACA1_367320A; Protein-tyrosine-phosphatase	complement(join(598365..598489,598576..599028,599103..599263,599355..599546,599620..599875,599938..600128,600190..600368))	Acanthamoeba castellanii str. Neff	14914573
ACA1_367330	CDS	ACA1_367330	NW_004457343.1	600488	601876	R	encoded by transcript ACA1_367330A; Mtm1 protein	complement(join(600488..600640,600727..600818,600904..601321,601400..601588,601706..601767,601849..601876))	Acanthamoeba castellanii str. Neff	14914574
ACA1_367340	CDS	ACA1_367340	NW_004457343.1	603139	605541	D	encoded by transcript ACA1_367340A; u3 small nucleolar rnaassociated protein 7, putative	join(603139..603318,603408..603608,603674..603884,603904..604082,604167..604302,604371..604521,604596..604759,604854..605038,605111..605308,605389..605541)	Acanthamoeba castellanii str. Neff	14914650
ACA1_367360	CDS	ACA1_367360	NW_004457343.1	610581	614067	R	encoded by transcript ACA1_367360A; DnaK family superfamily protein	complement(join(610581..610799,610899..611045,611123..611239,611333..611554,611639..611902,611979..612365,612538..612621,612704..612915,613035..613134,613235..613369,613433..613564,613661..613718,613793..614067))	Acanthamoeba castellanii str. Neff	14914652
ACA1_367370	CDS	ACA1_367370	NW_004457343.1	614265	616097	R	encoded by transcript ACA1_367370A; peptidase, S54 (rhomboid) subfamily protein	complement(join(614265..614375,614474..614538,614602..614679,614758..614826,614899..614949,615024..615126,615188..615265,615354..615458,615525..615650,615720..615844,616061..616097))	Acanthamoeba castellanii str. Neff	14914653
ACA1_367380	CDS	ACA1_367380	NW_004457343.1	617397	619302	D	encoded by transcript ACA1_367380A; uncharacterized protein	join(617397..617570,617639..617888,617949..618070,618139..618542,618632..618807,618916..619003,619089..619302)	Acanthamoeba castellanii str. Neff	14914654
ACA1_367390	CDS	ACA1_367390	NW_004457343.1	619518	622016	D	encoded by transcript ACA1_367390A; Lgulono-gamma-lactone oxidase	join(619518..619598,619665..619768,619847..619924,620014..620069,620181..620257,620335..620547,620621..620687,620773..620874,620945..621069,621149..621276,621388..621618,621785..622016)	Acanthamoeba castellanii str. Neff	14914655
ACA1_367400	CDS	ACA1_367400	NW_004457343.1	622168	625562	D	encoded by transcript ACA1_367400A; Ras subfamily protein	join(622168..622186,622431..622473,622569..622709,622813..622921,623083..623129,623193..623386,623489..623572,623682..623828,623917..624396,624495..624606,624949..625022,625111..625223,625347..625562)	Acanthamoeba castellanii str. Neff	14914656
ACA1_367410	CDS	ACA1_367410	NW_004457343.1	625667	628485	R	encoded by transcript ACA1_367410A; 3'5'cyclic nucleotide phosphodiesterase	complement(join(625667..625807,625891..626008,626112..626187,626283..626320,626401..626647,626773..626860,626928..627044,627133..627260,627383..627539,627637..627723,627806..628287,628347..628485))	Acanthamoeba castellanii str. Neff	14914657
ACA1_367420	CDS	ACA1_367420	NW_004457343.1	628899	631234	R	encoded by transcript ACA1_367420A; bifunctional protein FolC subfamily protein	complement(join(628899..629776,629853..629907,629990..630067,630146..630199,630401..630478,630537..630808,630906..631044,631109..631234))	Acanthamoeba castellanii str. Neff	14914658
ACA1_367430	CDS	ACA1_367430	NW_004457343.1	631879	633322	D	encoded by transcript ACA1_367430A; uncharacterized protein	join(<631879..631983,632059..632173,632235..632353,632429..632587,632649..632747,632939..633322)	Acanthamoeba castellanii str. Neff	14914659
ACA1_367440	CDS	ACA1_367440	NW_004457343.1	633419	633842	R	encoded by transcript ACA1_367440A; Ras guanine nucleotide exchange factor RasGEFB, putative	complement(join(633419..633678,633770..633842))	Acanthamoeba castellanii str. Neff	14914681
ACA1_367550	CDS	ACA1_367550	NW_004457343.1	638226	638454	D	encoded by transcript ACA1_367550A; uncharacterized protein	join(638226..638256,638330..638454)	Acanthamoeba castellanii str. Neff	14914682
ACA1_075950	CDS	ACA1_075950	NW_004457342.1	1049	1657	D	encoded by transcript ACA1_075950A; uncharacterized protein	join(1049..1395,1582..1657)	Acanthamoeba castellanii str. Neff	14914376
ACA1_076060	CDS	ACA1_076060	NW_004457342.1	1616	1914	R	encoded by transcript ACA1_076060A; uncharacterized protein	complement(join(1616..1642,1715..1749,1773..1914))	Acanthamoeba castellanii str. Neff	14914365
ACA1_076070	CDS	ACA1_076070	NW_004457342.1	2258	3020	D	encoded by transcript ACA1_076070A; sybindin, putative	join(2258..2359,2427..2494,2562..2665,2737..2798,2889..3020)	Acanthamoeba castellanii str. Neff	14914366
ACA1_076080	CDS	ACA1_076080	NW_004457342.1	3758	4891	D	encoded by transcript ACA1_076080A; leucine rich repeat domain containing protein	join(3758..4766,4845..4891)	Acanthamoeba castellanii str. Neff	14914377
ACA1_076090	CDS	ACA1_076090	NW_004457342.1	5209	5914	D	encoded by transcript ACA1_076090A; uncharacterized protein	join(5209..5353,5415..5539,5600..5724,5794..5914)	Acanthamoeba castellanii str. Neff	14914378
ACA1_076100	CDS	ACA1_076100	NW_004457342.1	6181	7044	D	encoded by transcript ACA1_076100A; uncharacterized protein	join(6181..6322,6476..6576,6658..6782,6918..7044)	Acanthamoeba castellanii str. Neff	14914379
ACA1_076110	CDS	ACA1_076110	NW_004457342.1	7183	8255	R	encoded by transcript ACA1_076110A; Ankyrin repeat containing protein	complement(join(7183..7236,7463..7609,7689..7801,7932..8030,8126..8255))	Acanthamoeba castellanii str. Neff	14914380
ACA1_076120	CDS	ACA1_076120	NW_004457342.1	9117	12618	D	encoded by transcript ACA1_076120A; copper amine oxidase, enzyme subfamily protein	join(9117..9240,9343..9773,9878..10079,10207..10316,10401..10469,10549..10654,10735..10835,10942..11149,11238..11314,11454..11560,11644..11904,12010..12093,12273..12618)	Acanthamoeba castellanii str. Neff	14914323
ACA1_076130	CDS	ACA1_076130	NW_004457342.1	13066	14970	D	encoded by transcript ACA1_076130A; uncharacterized protein	join(13066..13517,13603..13673,13734..13835,13961..14187,14314..14383,14603..14703,14794..14970)	Acanthamoeba castellanii str. Neff	14914324
ACA1_076140	CDS	ACA1_076140	NW_004457342.1	15118	15578	D	encoded by transcript ACA1_076140A; uncharacterized protein	join(15118..15162,15234..15578)	Acanthamoeba castellanii str. Neff	14914325
ACA1_076150	CDS	ACA1_076150	NW_004457342.1	15802	16779	R	encoded by transcript ACA1_076150A; ubiquitin family protein 5, putative	complement(join(15802..15883,16038..16121,16199..16779))	Acanthamoeba castellanii str. Neff	14914326
ACA1_076160	CDS	ACA1_076160	NW_004457342.1	17168	19390	D	encoded by transcript ACA1_076160A; Peroxisomalcoenzyme A synthetase	join(17168..17458,17604..17889,17971..18094,18218..18411,18514..18651,18755..19008,19076..19390)	Acanthamoeba castellanii str. Neff	14914327
ACA1_076170	CDS	ACA1_076170	NW_004457342.1	19469	22198	D	encoded by transcript ACA1_076170A; uncharacterized protein	join(19469..19500,19519..19884,20014..20108,20187..20492,20591..20788,20866..21241,21335..21435,21518..21778,21864..22198)	Acanthamoeba castellanii str. Neff	14914328
ACA1_076180	CDS	ACA1_076180	NW_004457342.1	22538	22999	R	encoded by transcript ACA1_076180A; polyubiquitin, putative	complement(22538..22999)	Acanthamoeba castellanii str. Neff	14914329
ACA1_076190	CDS	ACA1_076190	NW_004457342.1	23375	23911	D	encoded by transcript ACA1_076190A; uncharacterized protein	join(23375..23462,23565..23677,23750..23911)	Acanthamoeba castellanii str. Neff	14914413
ACA1_076200	CDS	ACA1_076200	NW_004457342.1	24036	25190	R	encoded by transcript ACA1_076200A; thioredoxin family Trp26 family protein	complement(join(24036..24160,24240..24325,24400..24507,24591..24668,24745..24788,24915..25014,25099..25190))	Acanthamoeba castellanii str. Neff	14914414
ACA1_076210	CDS	ACA1_076210	NW_004457342.1	25311	27738	R	encoded by transcript ACA1_076210A; uncharacterized protein	complement(join(25311..25454,25562..25673,25750..25919,26024..26158,26245..26292,26380..26435,26525..26646,26723..26870,26929..27038,27111..27213,27296..27383,27449..27510,27699..27738))	Acanthamoeba castellanii str. Neff	14914415
ACA1_076220	CDS	ACA1_076220	NW_004457342.1	27915	29530	D	encoded by transcript ACA1_076220A; CBS domain containing protein	join(27915..27980,28067..28216,28315..28391,28462..28525,28657..28705,28782..28884,28958..29057,29132..29232,29290..29359,29417..29530)	Acanthamoeba castellanii str. Neff	14914416
ACA1_076230	CDS	ACA1_076230	NW_004457342.1	30254	38434	D	encoded by transcript ACA1_076230A; multisensor hybrid histidine kinase	join(30254..30301,30450..30753,30769..30821,30855..30884,30925..31025,31117..31216,31282..31366,31449..31698,31785..31877,31983..32123,32190..32420,32516..32623,32725..32905,32982..33187,33297..33454,33544..33759,33888..34321,34411..34522,34620..34725,34794..35004,35082..35214,35303..35435,35531..35712,35793..35915,35987..36183,36286..36466,36555..36666,36771..36923,37033..37380,37562..37655,37772..37849,37952..38062,38171..38434)	Acanthamoeba castellanii str. Neff	14914417
ACA1_076240	CDS	ACA1_076240	NW_004457342.1	38750	41110	D	encoded by transcript ACA1_076240A; 4aminobutyrate aminotransferase	join(38750..38855,38967..39079,39164..39326,39404..39485,39600..39765,39858..39982,40083..40160,40281..40336,40434..40534,40652..40878,40993..41110)	Acanthamoeba castellanii str. Neff	14914418
ACA1_076250	CDS	ACA1_076250	NW_004457342.1	41230	43040	D	encoded by transcript ACA1_076250A; uncharacterized protein	join(41230..41463,41495..42859,42930..43040)	Acanthamoeba castellanii str. Neff	14914419
ACA1_076260	CDS	ACA1_076260	NW_004457342.1	44521	46413	D	encoded by transcript ACA1_076260A; LanC lantibiotic synthetase	join(44521..44598,44677..44735,44875..45036,45122..45224,45326..45425,45495..45597,45690..45798,45920..46061,46143..46288,46384..>46413)	Acanthamoeba castellanii str. Neff	14914420
ACA1_076370	CDS	ACA1_076370	NW_004457342.1	50525	51031	D	encoded by transcript ACA1_076370A; profilin	join(50525..50668,50804..51031)	Acanthamoeba castellanii str. Neff	14914421
ACA1_076380	CDS	ACA1_076380	NW_004457342.1	51962	54091	D	encoded by transcript ACA1_076380A; uncharacterized protein	join(51962..52114,52577..52807,52866..52962,53091..53181,53941..54091)	Acanthamoeba castellanii str. Neff	14914422
ACA1_076390	CDS	ACA1_076390	NW_004457342.1	54600	64436	D	encoded by transcript ACA1_076390A; GAF domain containing serine/threonine kinase	join(54600..54672,54804..55237,55299..55517,55629..56126,56241..56405,56552..56760,56841..57072,57172..57335,57443..57542,57608..57731,57833..57990,58065..58236,58323..58421,58517..58665,58699..58905,58978..59061,59172..59261,59350..59455,59527..59697,59791..59952,60038..60160,60302..60675,60752..60911,61002..61176,61252..61369,61439..61570,61650..61743,61845..62157,62177..62357,62461..62610,62719..63379,63449..63556,63637..63764,63875..64150,64230..64436)	Acanthamoeba castellanii str. Neff	14914423
ACA1_076400	CDS	ACA1_076400	NW_004457342.1	65018	65419	D	encoded by transcript ACA1_076400A; uncharacterized protein	join(65018..65050,65186..65419)	Acanthamoeba castellanii str. Neff	14914424
ACA1_076410	CDS	ACA1_076410	NW_004457342.1	65773	66275	R	encoded by transcript ACA1_076410A; uncharacterized protein	complement(join(65773..65834,65872..65957,66060..66157,66240..66275))	Acanthamoeba castellanii str. Neff	14914425
ACA1_076420	CDS	ACA1_076420	NW_004457342.1	66504	67793	D	encoded by transcript ACA1_076420A; uncharacterized protein	join(66504..66595,66693..66750,66819..66929,67013..67094,67216..67277,67394..67513,67595..67649,67744..67793)	Acanthamoeba castellanii str. Neff	14914426
ACA1_076430	CDS	ACA1_076430	NW_004457342.1	67894	69305	R	encoded by transcript ACA1_076430A; uncharacterized protein	complement(join(67894..68585,68678..68862,68976..69060,69131..69305))	Acanthamoeba castellanii str. Neff	14914427
ACA1_076440	CDS	ACA1_076440	NW_004457342.1	69608	70620	R	encoded by transcript ACA1_076440A; Ras subfamily protein	complement(join(69608..69942,70057..70239,70347..70472,70563..70620))	Acanthamoeba castellanii str. Neff	14914428
ACA1_076450	CDS	ACA1_076450	NW_004457342.1	71167	71592	D	encoded by transcript ACA1_076450A; uncharacterized protein	71167..71592	Acanthamoeba castellanii str. Neff	14914429
ACA1_076460	CDS	ACA1_076460	NW_004457342.1	72523	73397	D	encoded by transcript ACA1_076460A; uncharacterized protein	join(72523..72650,72675..72762,73269..73397)	Acanthamoeba castellanii str. Neff	14914430
ACA1_076470	CDS	ACA1_076470	NW_004457342.1	73497	74108	R	encoded by transcript ACA1_076470A; uncharacterized protein	complement(73497..74108)	Acanthamoeba castellanii str. Neff	14914431
ACA1_076480	CDS	ACA1_076480	NW_004457342.1	77561	77997	R	encoded by transcript ACA1_076480A; uncharacterized protein	complement(join(77561..77757,77850..77997))	Acanthamoeba castellanii str. Neff	14914432
ACA1_076490	CDS	ACA1_076490	NW_004457342.1	80056	80482	D	encoded by transcript ACA1_076490A; Fbox domain containing protein	join(80056..80243,80290..80482)	Acanthamoeba castellanii str. Neff	14914433
ACA1_076500	CDS	ACA1_076500	NW_004457342.1	80833	83716	R	encoded by transcript ACA1_076500A; uncharacterized protein	complement(join(80833..80996,81095..81158,81238..81361,81438..81484,81672..81752,81834..81911,81961..82047,82117..82244,82317..82374,82462..82555,82641..82748,82844..82910,82986..83058,83133..83222,83300..83337,83426..83525,83624..83716))	Acanthamoeba castellanii str. Neff	14914434
ACA1_076510	CDS	ACA1_076510	NW_004457342.1	84807	85610	D	encoded by transcript ACA1_076510A; uncharacterized protein	join(84807..85039,85119..85483,85597..85610)	Acanthamoeba castellanii str. Neff	14914435
ACA1_076520	CDS	ACA1_076520	NW_004457342.1	85762	86037	R	encoded by transcript ACA1_076520A; uncharacterized protein	complement(join(85762..85824,85873..86037))	Acanthamoeba castellanii str. Neff	14914436
ACA1_076530	CDS	ACA1_076530	NW_004457342.1	88100	88724	D	encoded by transcript ACA1_076530A; uncharacterized protein	join(88100..88297,88335..88724)	Acanthamoeba castellanii str. Neff	14914437
ACA1_076540	CDS	ACA1_076540	NW_004457342.1	88711	91497	R	encoded by transcript ACA1_076540A; hemagluttinin domain containing protein	complement(88711..91497)	Acanthamoeba castellanii str. Neff	14914438
ACA1_076550	CDS	ACA1_076550	NW_004457342.1	92183	93129	D	encoded by transcript ACA1_076550A; uncharacterized protein	join(92183..92441,92715..92847,92913..93129)	Acanthamoeba castellanii str. Neff	14914439
ACA1_076560	CDS	ACA1_076560	NW_004457342.1	93439	93966	R	encoded by transcript ACA1_076560A; uncharacterized protein	complement(join(93439..93646,93671..93966))	Acanthamoeba castellanii str. Neff	14914339
ACA1_076570	CDS	ACA1_076570	NW_004457342.1	95032	96792	R	encoded by transcript ACA1_076570A; serine/threonine kinase	complement(join(95032..96532,96548..96669,96697..96792))	Acanthamoeba castellanii str. Neff	14914340
ACA1_076580	CDS	ACA1_076580	NW_004457342.1	97015	98172	R	encoded by transcript ACA1_076580A; EGFlike domain containing serine/threonine protein kinase	complement(97015..98172)	Acanthamoeba castellanii str. Neff	14914341
ACA1_076590	CDS	ACA1_076590	NW_004457342.1	98433	99200	R	encoded by transcript ACA1_076590A; uncharacterized protein	complement(98433..99200)	Acanthamoeba castellanii str. Neff	14914342
ACA1_076600	CDS	ACA1_076600	NW_004457342.1	99672	100032	D	encoded by transcript ACA1_076600A; uncharacterized protein	join(99672..99825,99911..100032)	Acanthamoeba castellanii str. Neff	14914343
ACA1_076610	CDS	ACA1_076610	NW_004457342.1	100399	101650	R	encoded by transcript ACA1_076610A; uncharacterized protein	complement(join(100399..100994,101206..101650))	Acanthamoeba castellanii str. Neff	14914344
ACA1_076620	CDS	ACA1_076620	NW_004457342.1	101667	101951	R	encoded by transcript ACA1_076620A; thymidylate synthase	complement(101667..101951)	Acanthamoeba castellanii str. Neff	14914345
ACA1_076630	CDS	ACA1_076630	NW_004457342.1	102598	103825	R	encoded by transcript ACA1_076630A; SWIM zinc finger domain containing protein	complement(join(102598..102620,102655..103825))	Acanthamoeba castellanii str. Neff	14914346
ACA1_076640	CDS	ACA1_076640	NW_004457342.1	105007	105484	D	encoded by transcript ACA1_076640A; uncharacterized protein	join(105007..105123,105185..105484)	Acanthamoeba castellanii str. Neff	14914347
ACA1_076650	CDS	ACA1_076650	NW_004457342.1	106360	107407	R	encoded by transcript ACA1_076650A; uncharacterized protein	complement(join(106360..106875,107021..107407))	Acanthamoeba castellanii str. Neff	14914348
ACA1_076660	CDS	ACA1_076660	NW_004457342.1	108764	109183	R	encoded by transcript ACA1_076660A; uncharacterized protein	complement(108764..109183)	Acanthamoeba castellanii str. Neff	14914349
ACA1_076670	CDS	ACA1_076670	NW_004457342.1	110406	110907	D	encoded by transcript ACA1_076670A; uncharacterized protein	join(110406..110722,110868..110907)	Acanthamoeba castellanii str. Neff	14914350
ACA1_076680	CDS	ACA1_076680	NW_004457342.1	116312	117264	D	encoded by transcript ACA1_076680A; uncharacterized protein	join(116312..116404,116455..117264)	Acanthamoeba castellanii str. Neff	14914351
ACA1_076690	CDS	ACA1_076690	NW_004457342.1	118023	118280	R	encoded by transcript ACA1_076690A; uncharacterized protein	complement(join(118023..118118,118137..118280))	Acanthamoeba castellanii str. Neff	14914352
ACA1_076700	CDS	ACA1_076700	NW_004457342.1	119466	120187	D	encoded by transcript ACA1_076700A; uncharacterized protein	join(119466..119566,119618..119696,120152..120187)	Acanthamoeba castellanii str. Neff	14914353
ACA1_076710	CDS	ACA1_076710	NW_004457342.1	120030	120443	R	encoded by transcript ACA1_076710A; uncharacterized protein	complement(120030..120443)	Acanthamoeba castellanii str. Neff	14914354
ACA1_076720	CDS	ACA1_076720	NW_004457342.1	121680	122912	R	encoded by transcript ACA1_076720A; Fbox domain containing protein	complement(join(121680..121725,121814..121950,122025..122228,122280..122428,122514..122646,122760..122912))	Acanthamoeba castellanii str. Neff	14914355
ACA1_076730	CDS	ACA1_076730	NW_004457342.1	124048	124704	D	encoded by transcript ACA1_076730A; uncharacterized protein	124048..124704	Acanthamoeba castellanii str. Neff	14914356
ACA1_076740	CDS	ACA1_076740	NW_004457342.1	124926	128062	D	encoded by transcript ACA1_076740A; GMC family oxidoreductase	join(124926..125117,125233..125371,125459..125594,125705..125745,125819..125903,125982..126086,126160..126257,126357..126493,126745..126819,126912..127019,127194..127309,127402..127654,127847..128062)	Acanthamoeba castellanii str. Neff	14914357
ACA1_076750	CDS	ACA1_076750	NW_004457342.1	128577	128903	D	encoded by transcript ACA1_076750A; uncharacterized protein	128577..128903	Acanthamoeba castellanii str. Neff	14914358
ACA1_076760	CDS	ACA1_076760	NW_004457342.1	129216	131702	R	encoded by transcript ACA1_076760A; uncharacterized protein	complement(join(129216..129439,129559..129980,130131..130299,130411..131079,131173..131353,131580..131702))	Acanthamoeba castellanii str. Neff	14914359
ACA1_076770	CDS	ACA1_076770	NW_004457342.1	132334	140175	D	encoded by transcript ACA1_076770A; BTB/POZ domain containing protein	join(132334..132348,132438..132510,132647..132780,132866..132949,133234..133303,133385..133458,133537..133666,133715..133918,134002..134137,134207..134306,134387..134558,134651..134711,134815..135760,135844..135909,136013..136285,136393..136465,136537..136619,136730..137245,137340..137450,137525..137624,137735..138161,138247..138926,139045..139097,139195..139275,139360..140175)	Acanthamoeba castellanii str. Neff	14914360
ACA1_076780	CDS	ACA1_076780	NW_004457342.1	140231	143908	R	encoded by transcript ACA1_076780A; acylCoA synthetase	complement(join(140231..140545,140651..140800,140899..140967,141183..141532,141705..141784,141894..141974,142075..142149,142241..142383,142533..142787,142901..142961,143043..143130,143209..143404,143499..143568,143661..143721,143851..143908))	Acanthamoeba castellanii str. Neff	14914361
ACA1_076790	CDS	ACA1_076790	NW_004457342.1	143970	148592	R	encoded by transcript ACA1_076790A; exoribonuclease, putative	complement(join(143970..144212,144316..145235,145313..145519,145605..145909,145985..146144,146233..146329,146406..146505,146581..146849,146955..147154,147238..147448,147546..147688,147811..147922,148012..148137,148257..148364,148461..148592))	Acanthamoeba castellanii str. Neff	14914362
ACA1_076800	CDS	ACA1_076800	NW_004457342.1	149417	153218	D	encoded by transcript ACA1_076800A; ABC2 type transporter	join(149417..149443,149527..149590,149652..149726,149788..149856,149943..150053,150143..150273,150362..150463,150529..150661,150742..150842,150958..151108,151198..151285,151358..151448,151521..151790,151919..152011,152100..152169,152250..152332,152595..152751,152845..152997,153082..153218)	Acanthamoeba castellanii str. Neff	14914363
ACA1_076810	CDS	ACA1_076810	NW_004457342.1	153397	155130	D	encoded by transcript ACA1_076810A; transcriptional regulator, Sir2, putative	join(153397..154173,154295..154463,154584..154714,154816..154948,155105..155130)	Acanthamoeba castellanii str. Neff	14914364
ACA1_076820	CDS	ACA1_076820	NW_004457342.1	155382	163776	R	encoded by transcript ACA1_076820A; serine/threonine kinase	complement(join(155382..155680,155761..155860,155952..156157,156335..156503,156591..156717,156827..157149,157282..157527,157602..157792,158122..158324,158414..158486,158572..158719,158897..158963,159033..159218,159539..159598,159701..159788,159891..160031,160195..160298,160402..160441,160749..160885,160977..161071,161156..161365,161464..161564,161693..161809,161911..162067,162171..162298,162378..162558,162699..162854,162928..163081,163156..163261,163339..163463,163534..163609,163713..163776))	Acanthamoeba castellanii str. Neff	14914330
ACA1_076830	CDS	ACA1_076830	NW_004457342.1	163993	164707	R	encoded by transcript ACA1_076830A; Myb family DNA-binding domain containing protein	complement(join(163993..164101,164254..164358,164439..164707))	Acanthamoeba castellanii str. Neff	14914331
ACA1_076840	CDS	ACA1_076840	NW_004457342.1	165290	166220	D	encoded by transcript ACA1_076840A; guanine nucleotide exchange factor, putative	join(165290..165370,165510..165606,165688..165805,165880..166022,166111..166220)	Acanthamoeba castellanii str. Neff	14914332
ACA1_076850	CDS	ACA1_076850	NW_004457342.1	166448	167678	D	encoded by transcript ACA1_076850A; RasGEF domain containing protein	join(166448..166562,166640..166733,166822..167040,167111..167208,167286..167557,167622..167678)	Acanthamoeba castellanii str. Neff	14914333
ACA1_076860	CDS	ACA1_076860	NW_004457342.1	167890	169690	D	encoded by transcript ACA1_076860A; RNA binding motif containing protein	join(167890..168112,168211..168311,168410..168490,168614..169147,169247..169319,169394..169477,169494..169690)	Acanthamoeba castellanii str. Neff	14914334
ACA1_076870	CDS	ACA1_076870	NW_004457342.1	170534	171511	D	encoded by transcript ACA1_076870A; GATA zinc finger domain containing protein	join(170534..170728,170963..171511)	Acanthamoeba castellanii str. Neff	14914335
ACA1_076880	CDS	ACA1_076880	NW_004457342.1	172519	175383	D	encoded by transcript ACA1_076880A; alanine-tRNA ligase	172519..175383	Acanthamoeba castellanii str. Neff	14914336
ACA1_076890	CDS	ACA1_076890	NW_004457342.1	175803	179218	D	encoded by transcript ACA1_076890A; RasGEF domain containing protein	join(175803..175854,175940..176050,176267..176450,176555..176645,176950..177055,177170..177253,177348..177457,177567..177656,177735..177962,177983..178106,178196..178279,178400..178523,178596..178778,178873..179001,179098..179218)	Acanthamoeba castellanii str. Neff	14914337
ACA1_076900	CDS	ACA1_076900	NW_004457342.1	179519	181741	D	encoded by transcript ACA1_076900A; uncharacterized protein	179519..181741	Acanthamoeba castellanii str. Neff	14914338
ACA1_076910	CDS	ACA1_076910	NW_004457342.1	181927	183339	R	encoded by transcript ACA1_076910A; uncharacterized protein	complement(join(181927..182000,182067..182149,182246..182330,182437..182550,182783..182891,183019..183089,183219..183339))	Acanthamoeba castellanii str. Neff	14914393
ACA1_076920	CDS	ACA1_076920	NW_004457342.1	183747	186581	R	encoded by transcript ACA1_076920A; SPRY domain containing protein	complement(join(183747..184039,184137..184234,184383..184478,184591..184670,184780..184912,185027..185088,185207..185275,185413..185499,185637..185887,185981..186581))	Acanthamoeba castellanii str. Neff	14914394
ACA1_076930	CDS	ACA1_076930	NW_004457342.1	187160	195602	D	encoded by transcript ACA1_076930A; multidrug resistanceassociated protein, putative	join(187160..187198,187308..187351,187461..187581,187665..187781,187873..188007,188119..188205,188319..188414,188492..188547,188633..188717,188812..188876,188958..189110,189193..189292,189368..189462,189539..189577,189666..189763,189925..190069,190106..190217,190302..190385,190532..190573,190607..190706,190792..190963,191046..191142,191238..191341,191422..191506,191581..191661,191727..191886,191988..192365,192462..192534,192631..192802,192868..192977,193131..193221,193308..193391,193493..193576,193684..193741,193845..193962,194082..194252,194368..194487,194552..194675,194783..194930,195088..195183,195258..195396,195509..195602)	Acanthamoeba castellanii str. Neff	14914395
ACA1_076940	CDS	ACA1_076940	NW_004457342.1	195673	195930	R	encoded by transcript ACA1_076940A; uncharacterized protein	complement(195673..195930)	Acanthamoeba castellanii str. Neff	14914396
ACA1_076950	CDS	ACA1_076950	NW_004457342.1	196344	199316	R	encoded by transcript ACA1_076950A; uncharacterized protein	complement(join(196344..198969,199106..199226,199310..199316))	Acanthamoeba castellanii str. Neff	14914397
ACA1_076960	CDS	ACA1_076960	NW_004457342.1	200072	202609	R	encoded by transcript ACA1_076960A; uncharacterized protein	complement(join(200072..202108,202571..202609))	Acanthamoeba castellanii str. Neff	14914398
ACA1_076970	CDS	ACA1_076970	NW_004457342.1	203734	205804	R	encoded by transcript ACA1_076970A; GDPfucose transporter	complement(join(203734..203802,203894..204023,204141..204201,204318..204380,204447..204512,204597..204811,204913..205006,205080..205164,205254..205320,205452..205804))	Acanthamoeba castellanii str. Neff	14914399
ACA1_076980	CDS	ACA1_076980	NW_004457342.1	206334	208904	D	encoded by transcript ACA1_076980A; RuvBlike helicase, putative	join(206334..206388,206509..206679,206787..206922,207039..207126,207231..207337,207416..207509,207598..207721,207793..207887,207989..208047,208133..208214,208300..208397,208467..208526,208601..208670,208761..208904)	Acanthamoeba castellanii str. Neff	14914400
ACA1_076990	CDS	ACA1_076990	NW_004457342.1	209036	210758	R	encoded by transcript ACA1_076990A; aminotransferase	complement(join(209036..209575,209657..209772,209853..209958,210047..210170,210277..210356,210440..210505,210612..210758))	Acanthamoeba castellanii str. Neff	14914401
ACA1_077000	CDS	ACA1_077000	NW_004457342.1	210885	211217	D	encoded by transcript ACA1_077000A; uncharacterized protein	<210885..>211217	Acanthamoeba castellanii str. Neff	14914402
ACA1_077010	CDS	ACA1_077010	NW_004457342.1	211266	211841	R	encoded by transcript ACA1_077010A; uncharacterized protein	complement(211266..211841)	Acanthamoeba castellanii str. Neff	14914403
ACA1_077020	CDS	ACA1_077020	NW_004457342.1	212144	215798	D	encoded by transcript ACA1_077020A; propionate-CoA synthetase and ligase	join(212144..212382,212493..212596,212685..212770,212788..212989,213065..213174,213244..213362,213440..213557,213643..213788,213927..214029,214126..214243,214315..214420,214497..214706,214781..214881,214975..215029,215101..215248,215322..215408,215504..215588,215698..215798)	Acanthamoeba castellanii str. Neff	14914404
ACA1_077030	CDS	ACA1_077030	NW_004457342.1	215981	218619	R	encoded by transcript ACA1_077030A; C2 domain containing protein	complement(join(215981..216701,216761..216842,216949..217028,217081..217189,217256..217380,217447..217762,217833..217972,218049..218168,218242..218344,218410..218448,218541..218619))	Acanthamoeba castellanii str. Neff	14914405
ACA1_077050	CDS	ACA1_077050	NW_004457342.1	223731	224453	R	encoded by transcript ACA1_077050A; uncharacterized protein	complement(join(223731..223896,223995..224076,224200..224370,224435..224453))	Acanthamoeba castellanii str. Neff	14914407
ACA1_077060	CDS	ACA1_077060	NW_004457342.1	224944	226222	R	encoded by transcript ACA1_077060A; uncharacterized protein	complement(join(224944..225102,225185..225267,225340..225724,225884..226029,226138..226222))	Acanthamoeba castellanii str. Neff	14914408
ACA1_077070	CDS	ACA1_077070	NW_004457342.1	226493	226943	R	encoded by transcript ACA1_077070A; uncharacterized protein	complement(join(226493..226558,226573..226779,226890..226943))	Acanthamoeba castellanii str. Neff	14914409
ACA1_077080	CDS	ACA1_077080	NW_004457342.1	227049	231830	R	encoded by transcript ACA1_077080A; guanylyl cyclase	complement(join(227049..227171,227314..227367,227469..227639,227758..227924,228014..228144,228226..228529,228619..228739,228815..230020,230107..230286,230415..230552,230651..230772,230847..230952,231013..231114,231212..231283,231550..231684,231801..231830))	Acanthamoeba castellanii str. Neff	14914410
ACA1_077090	CDS	ACA1_077090	NW_004457342.1	232290	235356	R	encoded by transcript ACA1_077090A; endomembrane protein EMP70 precursor isolog, putative	complement(join(232290..232357,232515..232636,232703..232796,232861..233073,233146..233224,233305..233417,233487..233666,233737..233837,233931..234064,234147..234299,234380..234507,234625..234714,234789..234854,234929..235055,235249..235356))	Acanthamoeba castellanii str. Neff	14914411
ACA1_077100	CDS	ACA1_077100	NW_004457342.1	235773	236757	R	encoded by transcript ACA1_077100A; Rab1/RabDfamily small GTPase	complement(join(235773..235899,235986..236094,236205..236313,236376..236462,236543..236568,236661..236757))	Acanthamoeba castellanii str. Neff	14914412
ACA1_077110	CDS	ACA1_077110	NW_004457342.1	237493	238652	R	encoded by transcript ACA1_077110A; uncharacterized protein	complement(join(237493..237535,237620..237912,237981..238372,238442..238652))	Acanthamoeba castellanii str. Neff	14914381
ACA1_077120	CDS	ACA1_077120	NW_004457342.1	238931	244861	R	encoded by transcript ACA1_077120A; RhoGEF domain containing protein	complement(join(238931..239041,239137..239256,239327..239410,239493..239558,239637..239999,240089..240145,240250..240326,240405..240474,240592..240753,240855..240991,241118..241213,241299..241443,241571..241678,241830..241976,242130..242234,242321..242395,242504..242623,242705..242781,242863..243108,243212..243899,244157..244861))	Acanthamoeba castellanii str. Neff	14914382
ACA1_077130	CDS	ACA1_077130	NW_004457342.1	245506	247948	R	encoded by transcript ACA1_077130A; uncharacterized protein	complement(join(245506..247698,247778..247948))	Acanthamoeba castellanii str. Neff	14914383
ACA1_077140	CDS	ACA1_077140	NW_004457342.1	248473	249723	R	encoded by transcript ACA1_077140A; RNA recognition domain containing protein	complement(join(248473..248562,248694..248773,248846..248960,249053..249121,249244..249382,249482..249723))	Acanthamoeba castellanii str. Neff	14914384
ACA1_077150	CDS	ACA1_077150	NW_004457342.1	250061	251554	D	encoded by transcript ACA1_077150A; uncharacterized protein	join(250061..250147,250283..250447,250712..250829,250924..251006,251108..251223,251345..251420,251531..251554)	Acanthamoeba castellanii str. Neff	14914385
ACA1_077160	CDS	ACA1_077160	NW_004457342.1	251869	253371	D	encoded by transcript ACA1_077160A; uncharacterized protein	join(251869..251922,252050..252123,252216..252309,252436..253371)	Acanthamoeba castellanii str. Neff	14914386
ACA1_077170	CDS	ACA1_077170	NW_004457342.1	253429	254327	R	encoded by transcript ACA1_077170A; uncharacterized protein	complement(join(253429..253665,253775..254047,254253..254327))	Acanthamoeba castellanii str. Neff	14914387
ACA1_077180	CDS	ACA1_077180	NW_004457342.1	254474	255444	R	encoded by transcript ACA1_077180A; uncharacterized protein	complement(join(254474..254655,254749..254800,254916..254959,255033..255201,255283..255444))	Acanthamoeba castellanii str. Neff	14914388
ACA1_077190	CDS	ACA1_077190	NW_004457342.1	255577	257924	D	encoded by transcript ACA1_077190A; uncharacterized protein	join(255577..256044,256266..256380,256460..256584,256800..257062,257305..257408,257472..257569,257667..257924)	Acanthamoeba castellanii str. Neff	14914389
ACA1_077200	CDS	ACA1_077200	NW_004457342.1	258136	259331	R	encoded by transcript ACA1_077200A; uncharacterized protein	complement(join(258136..258211,258450..258684,258874..258919,259023..259331))	Acanthamoeba castellanii str. Neff	14914390
ACA1_077210	CDS	ACA1_077210	NW_004457342.1	260456	260923	R	encoded by transcript ACA1_077210A; uncharacterized protein	complement(260456..260923)	Acanthamoeba castellanii str. Neff	14914391
ACA1_077220	CDS	ACA1_077220	NW_004457342.1	261386	262084	R	encoded by transcript ACA1_077220A; uncharacterized protein	complement(261386..262084)	Acanthamoeba castellanii str. Neff	14914392
ACA1_077230	CDS	ACA1_077230	NW_004457342.1	262620	263337	R	encoded by transcript ACA1_077230A; uncharacterized protein	complement(join(262620..262725,262804..262847,262942..263337))	Acanthamoeba castellanii str. Neff	14914367
ACA1_077240	CDS	ACA1_077240	NW_004457342.1	263751	266022	D	encoded by transcript ACA1_077240A; hydrolase, alpha/beta fold domain containing protein	join(263751..263953,264203..264280,264418..264552,264617..264719,264812..264868,264959..265028,265108..265166,265254..265385,265555..265618,265695..265823,265895..266022)	Acanthamoeba castellanii str. Neff	14914368
ACA1_077250	CDS	ACA1_077250	NW_004457342.1	266255	270970	D	encoded by transcript ACA1_077250A; mRNA decay factorlike protein	join(266255..266706,266775..267141,267225..267401,267483..267551,267658..268270,268360..268484,268573..268757,268836..269017,269104..269329,269403..269469,269554..269730,269839..269925,270002..270233,270327..270494,270588..270738,270820..270970)	Acanthamoeba castellanii str. Neff	14914369
ACA1_077260	CDS	ACA1_077260	NW_004457342.1	271561	274073	R	encoded by transcript ACA1_077260A; Ras family protein	complement(join(271561..272134,272158..272393,272448..272484,272547..272659,272769..272890,272967..273081,273173..273259,273330..274073))	Acanthamoeba castellanii str. Neff	14914370
ACA1_077270	CDS	ACA1_077270	NW_004457342.1	274689	277032	D	encoded by transcript ACA1_077270A; zinc finger domain containing protein	join(274689..275002,275146..276056,276157..276287,276377..276560,276651..276854,276932..277032)	Acanthamoeba castellanii str. Neff	14914371
ACA1_077280	CDS	ACA1_077280	NW_004457342.1	277519	279119	D	encoded by transcript ACA1_077280A; CBS domain containing protein	join(277519..277654,277728..277774,277840..277984,278075..278171,278250..278351,278443..278542,278631..278705,278800..278893,278959..279119)	Acanthamoeba castellanii str. Neff	14914372
ACA1_077290	CDS	ACA1_077290	NW_004457342.1	279607	284229	D	encoded by transcript ACA1_077290A; 5'nucleotidase	join(279607..282012,282112..284229)	Acanthamoeba castellanii str. Neff	14914373
ACA1_077300	CDS	ACA1_077300	NW_004457342.1	285483	292460	D	encoded by transcript ACA1_077300A; serine/threonine kinase	join(285483..285504,285698..285912,286065..286189,286280..286439,286522..286678,286775..287216,287305..287395,287462..287557,287644..287716,287785..287843,287945..288038,288134..288464,288557..288623,288783..288872,288974..289354,289407..289586,289684..289880,289953..290168,290255..291119,291228..291332,291369..291773,291871..292009,292082..292280,292364..292460)	Acanthamoeba castellanii str. Neff	14914374
ACA1_077310	CDS	ACA1_077310	NW_004457342.1	292917	294809	D	encoded by transcript ACA1_077310A; multisensor hybrid histidine kinase	join(292917..292970,293000..293266,293439..>294809)	Acanthamoeba castellanii str. Neff	14914375
ACA1_316750	CDS	ACA1_316750	NW_004457341.1	167	5015	D	encoded by transcript ACA1_316750A; peptidase, S8/S53 subfamily protein	join(167..224,366..587,727..974,1097..1384,1465..1701,1833..2028,2281..2582,2681..2781,2875..2957,3026..3083,3154..3226,3296..3533,3605..3744,3846..3939,4036..4117,4202..4277,4356..4419,4549..4699,4781..5015)	Acanthamoeba castellanii str. Neff	14914322
ACA1_316960	CDS	ACA1_316960	NW_004457341.1	7875	10413	R	encoded by transcript ACA1_316960A; kelch repeat protein	complement(join(<7875..7959,8053..8171,8261..8324,8483..8592,8726..8878,8942..9039,9155..9206,9283..9366,9506..9602,9692..9843,10009..10114,10264..10413))	Acanthamoeba castellanii str. Neff	14914321
ACA1_317070	CDS	ACA1_317070	NW_004457341.1	10961	12323	R	encoded by transcript ACA1_317070A; galactose1-phosphate uridylyltransferase	complement(join(10961..11817,11935..12055,12222..>12323))	Acanthamoeba castellanii str. Neff	14914320
ACA1_014350	CDS	ACA1_014350	NW_004457340.1	35	1822	R	encoded by transcript ACA1_014350A; uncharacterized protein	complement(join(<35..1402,1481..1627,1766..1822))	Acanthamoeba castellanii str. Neff	14914315
ACA1_014360	CDS	ACA1_014360	NW_004457340.1	2874	5296	D	encoded by transcript ACA1_014360A; calcium/calmodulindependent protein kinase	join(2874..3148,3707..3797,3878..3996,4097..4225,4298..4365,4462..4527,4619..4694,4775..4893,4970..5153,5221..5296)	Acanthamoeba castellanii str. Neff	14914316
ACA1_014370	CDS	ACA1_014370	NW_004457340.1	6484	8773	D	encoded by transcript ACA1_014370A; Catalase, putative	join(6484..6919,7029..8773)	Acanthamoeba castellanii str. Neff	14914318
ACA1_014380	CDS	ACA1_014380	NW_004457340.1	8894	9715	R	encoded by transcript ACA1_014380A; nuclear movement protein nudC, putative	complement(join(8894..8933,9062..9138,9206..9372,9432..9480,9542..9715))	Acanthamoeba castellanii str. Neff	14914319
ACA1_014390	CDS	ACA1_014390	NW_004457340.1	9941	10472	D	encoded by transcript ACA1_014390A; uncharacterized protein	join(9941..9947,10019..10177,10267..10472)	Acanthamoeba castellanii str. Neff	14914317
ACA1_313490	CDS	ACA1_313490	NW_004457339.1	65	2359	R	encoded by transcript ACA1_313490A; uncharacterized protein	complement(join(<65..501,599..751,843..1383,1478..1590,1692..1833,1901..2084,2178..2359))	Acanthamoeba castellanii str. Neff	14914313
ACA1_313600	CDS	ACA1_313600	NW_004457339.1	8558	9478	R	encoded by transcript ACA1_313600A; Peptidylprolyl cis-trans isomerase-like 1, putative	complement(join(8558..8657,8768..8860,8987..9112,9213..9274,9332..9478))	Acanthamoeba castellanii str. Neff	14914312
ACA1_313610	CDS	ACA1_313610	NW_004457339.1	9686	13315	D	encoded by transcript ACA1_313610A; calciumtransporting P-type ATPase, PMR1-type, putative	join(9686..10724,10832..11033,11120..11317,11405..11595,11688..11940,12027..12189,12293..12470,12556..12704,12814..12969,13097..13315)	Acanthamoeba castellanii str. Neff	14914314
ACA1_313620	CDS	ACA1_313620	NW_004457339.1	13302	15318	R	encoded by transcript ACA1_313620A; uncharacterized protein	complement(join(13302..13523,13610..13742,13859..14037,14117..14243,14348..14470,14563..14680,14796..14898,14963..15065,15182..15318))	Acanthamoeba castellanii str. Neff	14914311
ACA1_297190	CDS	ACA1_297190	NW_004457338.1	78	2126	D	encoded by transcript ACA1_297190A; uncharacterized protein	join(<78..164,247..335,431..2126)	Acanthamoeba castellanii str. Neff	14914310
ACA1_297200	CDS	ACA1_297200	NW_004457338.1	2199	4442	R	encoded by transcript ACA1_297200A; uncharacterized protein	complement(join(2199..2459,2538..2903,2993..3292,3428..3586,3697..3772,3870..3917,3995..4082,4197..4305,4407..4442))	Acanthamoeba castellanii str. Neff	14914307
ACA1_297210	CDS	ACA1_297210	NW_004457338.1	4577	7571	R	encoded by transcript ACA1_297210A; ATPase/histidine kinase/DNA gyrase B/HSP90 domain containing protein	complement(join(4577..4723,4818..5002,5025..5667,5739..6280,6360..6541,6640..6782,6839..6917,7162..7571))	Acanthamoeba castellanii str. Neff	14914308
ACA1_297220	CDS	ACA1_297220	NW_004457338.1	7991	12346	R	encoded by transcript ACA1_297220A; phospholipase, patatin family protein	complement(join(7991..8410,8496..8633,8693..8772,8900..10089,10147..10225,10307..10455,10529..10654,10737..10939,11026..11138,11218..11325,11423..11489,11559..11661,11750..11946,12021..12128,12218..12346))	Acanthamoeba castellanii str. Neff	14914309
ACA1_017880	CDS	ACA1_017880	NW_004457337.1	333	1284	D	encoded by transcript ACA1_017880A; uncharacterized protein	join(<333..597,688..891,956..1284)	Acanthamoeba castellanii str. Neff	14914303
ACA1_017890	CDS	ACA1_017890	NW_004457337.1	1449	2887	D	encoded by transcript ACA1_017890A; uncharacterized protein	join(1449..1873,1994..2312,2426..2590,2672..2887)	Acanthamoeba castellanii str. Neff	14914306
ACA1_018000	CDS	ACA1_018000	NW_004457337.1	6082	7860	D	encoded by transcript ACA1_018000A; betalactamase	join(6082..6104,6168..6256,6325..6461,6529..6632,6705..6756,6923..7000,7069..7147,7222..7398,7465..7632,7718..7860)	Acanthamoeba castellanii str. Neff	14914304
ACA1_018110	CDS	ACA1_018110	NW_004457337.1	9481	9993	R	encoded by transcript ACA1_018110A; uncharacterized protein	complement(join(9481..9544,9605..9899,9972..9993))	Acanthamoeba castellanii str. Neff	14914305
ACA1_018120	CDS	ACA1_018120	NW_004457337.1	10381	11864	D	encoded by transcript ACA1_018120A; uncharacterized protein	join(10381..10839,10911..11067,11164..11460,11566..11864)	Acanthamoeba castellanii str. Neff	14914300
ACA1_018130	CDS	ACA1_018130	NW_004457337.1	13435	13641	D	encoded by transcript ACA1_018130A; uncharacterized protein	13435..13641	Acanthamoeba castellanii str. Neff	14914301
ACA1_018140	CDS	ACA1_018140	NW_004457337.1	14159	18084	R	encoded by transcript ACA1_018140A; leucine-tRNA ligase	complement(join(14159..15422,15546..15907,15988..16159,16266..16722,16812..17379,17472..17551,17646..17732,17747..17799,17813..18084))	Acanthamoeba castellanii str. Neff	14914302
ACA1_002090	CDS	ACA1_002090	NW_004457336.1	105	499	D	encoded by transcript ACA1_002090A; uncharacterized protein	join(105..333,426..499)	Acanthamoeba castellanii str. Neff	14914298
ACA1_002200	CDS	ACA1_002200	NW_004457336.1	13044	14169	D	encoded by transcript ACA1_002200A; cytochrome b-like heme/steroid binding domain containing protein	join(13044..13125,13220..13318,13394..13512,13588..13667,13740..13840,13912..13975,14142..14169)	Acanthamoeba castellanii str. Neff	14914299
ACA1_075500	CDS	ACA1_075500	NW_004457335.1	242	771	D	encoded by transcript ACA1_075500A; SH3 domain containing protein	join(242..278,363..591,684..771)	Acanthamoeba castellanii str. Neff	14914297
ACA1_075510	CDS	ACA1_075510	NW_004457335.1	906	1334	R	encoded by transcript ACA1_075510A; uncharacterized protein	complement(join(906..1090,1163..1334))	Acanthamoeba castellanii str. Neff	14914292
ACA1_075620	CDS	ACA1_075620	NW_004457335.1	3378	4450	D	encoded by transcript ACA1_075620A; RasGEF domain containing protein	join(3378..3600,3714..3941,4022..4173,4271..>4450)	Acanthamoeba castellanii str. Neff	14914293
ACA1_075730	CDS	ACA1_075730	NW_004457335.1	6795	7491	D	encoded by transcript ACA1_075730A; uncharacterized protein	join(6795..6898,6972..7246,7313..7491)	Acanthamoeba castellanii str. Neff	14914294
ACA1_075740	CDS	ACA1_075740	NW_004457335.1	7555	12351	D	encoded by transcript ACA1_075740A; tetratricopeptide repeat domain containing protein	join(7555..7661,7881..7994,8018..8195,8213..8389,8501..8570,8759..8855,8920..9037,9341..9403,9523..9708,9786..9867,9974..10065,10131..10331,10441..10690,10764..10857,11026..11110,11204..11315,11433..11542,11638..11738,11876..11982,12085..12178,12276..12351)	Acanthamoeba castellanii str. Neff	14914295
ACA1_075850	CDS	ACA1_075850	NW_004457335.1	14667	15347	R	encoded by transcript ACA1_075850A; uncharacterized protein	complement(join(14667..14731,14888..15182,15204..15347))	Acanthamoeba castellanii str. Neff	14914296
ACA1_008840	CDS	ACA1_008840	NW_004457334.1	266	1610	D	encoded by transcript ACA1_008840A; Multicopper oxidase, type 2	join(266..434,509..562,624..721,797..1150,1235..1309,1508..1565,1591..1610)	Acanthamoeba castellanii str. Neff	14914289
ACA1_008950	CDS	ACA1_008950	NW_004457334.1	8427	9783	D	encoded by transcript ACA1_008950A; uncharacterized protein	join(8427..8492,8751..8866,8928..9125,9234..9300,9378..9462,9548..9641,9708..>9783)	Acanthamoeba castellanii str. Neff	14914291
ACA1_009060	CDS	ACA1_009060	NW_004457334.1	15191	16116	D	encoded by transcript ACA1_009060A; uncharacterized protein	join(15191..15287,15427..15562,15701..15951,16041..>16116)	Acanthamoeba castellanii str. Neff	14914290
ACA1_305150	CDS	ACA1_305150	NW_004457333.1	54	2285	D	encoded by transcript ACA1_305150A; protein disulfide isomerase associated 4, putative	join(<54..228,338..466,579..666,777..900,993..1162,1207..1301,1402..1523,1612..1726,1791..1957,2040..2285)	Acanthamoeba castellanii str. Neff	14914276
ACA1_305160	CDS	ACA1_305160	NW_004457333.1	2515	4531	R	encoded by transcript ACA1_305160A; uncharacterized protein	complement(join(2515..2727,2886..3499,3577..3723,3791..3919,3995..4400,4490..4531))	Acanthamoeba castellanii str. Neff	14914275
ACA1_305380	CDS	ACA1_305380	NW_004457333.1	5455	7601	R	encoded by transcript ACA1_305380A; Rap1 Myb domain containing protein	complement(join(5455..5579,5660..5760,5859..6359,6496..6656,6730..6838,6968..7101,7244..7262,7353..7426,7503..7601))	Acanthamoeba castellanii str. Neff	14914278
ACA1_305390	CDS	ACA1_305390	NW_004457333.1	7713	9484	R	encoded by transcript ACA1_305390A; PH domain containing protein	complement(join(7713..7784,7865..7970,8056..8173,8259..8414,8561..8759,8833..8951,9124..9211,9326..9484))	Acanthamoeba castellanii str. Neff	14914279
ACA1_305400	CDS	ACA1_305400	NW_004457333.1	9591	12035	R	encoded by transcript ACA1_305400A; Poly(beta-D-mannuronate) lyase, putative	complement(join(9591..10082,11122..11358,11451..12035))	Acanthamoeba castellanii str. Neff	14914280
ACA1_305510	CDS	ACA1_305510	NW_004457333.1	12373	13497	R	encoded by transcript ACA1_305510A; uncharacterized protein	complement(join(12373..12501,12562..12689,12767..12943,13022..13151,13279..13497))	Acanthamoeba castellanii str. Neff	14914281
ACA1_305520	CDS	ACA1_305520	NW_004457333.1	13994	14834	R	encoded by transcript ACA1_305520A; uncharacterized protein	complement(join(13994..14061,14135..14239,14735..14834))	Acanthamoeba castellanii str. Neff	14914282
ACA1_305530	CDS	ACA1_305530	NW_004457333.1	15037	16737	D	encoded by transcript ACA1_305530A; uncharacterized protein	join(15037..15127,15206..15258,15332..15511,15594..15698,15813..15905,15966..16032,16102..16178,16274..16338,16419..16524,16621..16737)	Acanthamoeba castellanii str. Neff	14914283
ACA1_305540	CDS	ACA1_305540	NW_004457333.1	16828	18496	R	encoded by transcript ACA1_305540A; enoylCoA hydratase/isomerase family domain containing protein	complement(join(16828..17136,17221..17321,17433..17550,17672..17815,17930..18019,18118..18249,18356..18496))	Acanthamoeba castellanii str. Neff	14914284
ACA1_305550	CDS	ACA1_305550	NW_004457333.1	18700	20571	D	encoded by transcript ACA1_305550A; gammaglutamyl hydrolase, putative	join(18700..18893,19007..19042,19145..19194,19332..19495,19506..19660,19740..19843,19938..20088,20234..20314,20442..20571)	Acanthamoeba castellanii str. Neff	14914285
ACA1_305560	CDS	ACA1_305560	NW_004457333.1	20675	21407	R	encoded by transcript ACA1_305560A; uncharacterized protein	complement(join(20675..20765,20852..21106,21189..21275,21343..21407))	Acanthamoeba castellanii str. Neff	14914286
ACA1_305680	CDS	ACA1_305680	NW_004457333.1	29272	29927	D	encoded by transcript ACA1_305680A; uncharacterized protein	join(29272..29380,29472..29541,29615..>29927)	Acanthamoeba castellanii str. Neff	14914288
ACA1_120560	CDS	ACA1_120560	NW_004457332.1	4950	5803	R	encoded by transcript ACA1_120560A; U2 snRNP component prp10, putative	complement(join(<4950..5090,5238..5313,5420..5501,5612..5743,5797..5803))	Acanthamoeba castellanii str. Neff	14914268
ACA1_120570	CDS	ACA1_120570	NW_004457332.1	6080	8885	R	encoded by transcript ACA1_120570A; uncharacterized protein	complement(join(6080..6177,6266..6396,6485..6562,6687..6773,6869..6930,7534..7647,8515..8599,8698..8885))	Acanthamoeba castellanii str. Neff	14914274
ACA1_120780	CDS	ACA1_120780	NW_004457332.1	11506	12787	D	encoded by transcript ACA1_120780A; uncharacterized protein	join(11506..11544,11605..11740,11860..12093,12210..12787)	Acanthamoeba castellanii str. Neff	14914269
ACA1_120790	CDS	ACA1_120790	NW_004457332.1	13004	14475	D	encoded by transcript ACA1_120790A; uncharacterized protein	join(13004..13121,13195..13243,13355..13475,13696..13755,13812..13896,13967..14092,14207..14475)	Acanthamoeba castellanii str. Neff	14914270
ACA1_120800	CDS	ACA1_120800	NW_004457332.1	14809	17513	R	encoded by transcript ACA1_120800A; uncharacterized protein	complement(join(14809..14889,14930..15277,15407..15631,15723..16273,16397..16560,16800..17075,17148..17247,17354..17513))	Acanthamoeba castellanii str. Neff	14914271
ACA1_120810	CDS	ACA1_120810	NW_004457332.1	17642	23620	R	encoded by transcript ACA1_120810A; Phosphatidylinositol-4-phosphate 5-Kinase	complement(join(17642..17737,17899..18028,18157..18598,18761..19052,19173..19247,19361..19441,19728..19874,20031..20198,20305..20410,20553..20579,21617..21690,21809..21982,22113..22181,22291..22374,22890..23258,23356..23490,23522..23620))	Acanthamoeba castellanii str. Neff	14914272
ACA1_120920	CDS	ACA1_120920	NW_004457332.1	24153	24960	D	encoded by transcript ACA1_120920A; uncharacterized protein	24153..>24960	Acanthamoeba castellanii str. Neff	14914273
ACA1_341550	CDS	ACA1_341550	NW_004457331.1	117	2884	R	encoded by transcript ACA1_341550A; uncharacterized protein	complement(join(117..164,252..309,388..495,565..677,751..880,969..1171,1257..1391,1483..1590,1674..1758,1834..1909,2016..2108,2225..2324,2419..2519,2635..2884))	Acanthamoeba castellanii str. Neff	14914260
ACA1_341560	CDS	ACA1_341560	NW_004457331.1	3363	4874	D	encoded by transcript ACA1_341560A; CBS domain containing protein	join(3363..3864,3936..4069,4139..4399,4517..4594,4692..4874)	Acanthamoeba castellanii str. Neff	14914267
ACA1_341570	CDS	ACA1_341570	NW_004457331.1	4969	5635	D	encoded by transcript ACA1_341570A; Glutaminylpeptide cyclotransferase	join(4969..5076,5211..5397,5493..5635)	Acanthamoeba castellanii str. Neff	14914261
ACA1_341680	CDS	ACA1_341680	NW_004457331.1	8049	9012	R	encoded by transcript ACA1_341680A; uncharacterized protein	complement(join(<8049..8220,8307..8422,8557..9012))	Acanthamoeba castellanii str. Neff	14914262
ACA1_341790	CDS	ACA1_341790	NW_004457331.1	9850	10871	R	encoded by transcript ACA1_341790A; phosphogluconate dehydrogenase (decarboxylating), NAD binding domain containing protein	complement(join(9850..9884,9973..10095,10184..10367,10423..10699,10783..10871))	Acanthamoeba castellanii str. Neff	14914263
ACA1_341900	CDS	ACA1_341900	NW_004457331.1	13377	13761	D	encoded by transcript ACA1_341900A; uncharacterized protein	join(13377..13518,13619..13761)	Acanthamoeba castellanii str. Neff	14914264
ACA1_341910	CDS	ACA1_341910	NW_004457331.1	14734	17569	D	encoded by transcript ACA1_341910A; uncharacterized protein	join(14734..14841,14893..15030,15099..15211,15523..15844,15917..16033,16101..16226,16286..16427,16499..16635,16955..17286,17370..17454,17513..17569)	Acanthamoeba castellanii str. Neff	14914265
ACA1_341920	CDS	ACA1_341920	NW_004457331.1	17704	18147	D	encoded by transcript ACA1_341920A; monad, putative	17704..>18147	Acanthamoeba castellanii str. Neff	14914266
ACA1_332070	CDS	ACA1_332070	NW_004457330.1	709	2709	D	encoded by transcript ACA1_332070A; nucleolar gtpbinding protein 1, putative	join(709..927,1057..1244,1333..1431,1505..1652,2236..2709)	Acanthamoeba castellanii str. Neff	14914259
ACA1_332180	CDS	ACA1_332180	NW_004457330.1	2982	3284	D	encoded by transcript ACA1_332180A; nucleolar gtp-binding protein 1 family protein	2982..3284	Acanthamoeba castellanii str. Neff	14914233
ACA1_332190	CDS	ACA1_332190	NW_004457330.1	3839	7671	D	encoded by transcript ACA1_332190A; RNA polymerase I specific transcription initiation factor RRN3 protein	join(3839..3919,3988..4065,4142..4265,5141..5242,5565..5638,5905..6087,6342..6455,6549..6690,6777..6922,7006..7671)	Acanthamoeba castellanii str. Neff	14914234
ACA1_332300	CDS	ACA1_332300	NW_004457330.1	8310	10309	D	encoded by transcript ACA1_332300A; uncharacterized protein	join(8310..8773,8898..9031,9111..9249,9387..9510,9621..9797,9896..10309)	Acanthamoeba castellanii str. Neff	14914235
ACA1_332310	CDS	ACA1_332310	NW_004457330.1	10604	14284	D	encoded by transcript ACA1_332310A; amino acid permease	join(10604..10811,10948..11039,11243..11336,11440..11580,11674..11844,11924..12096,12239..12394,12502..12627,12750..12826,12872..12936,13033..13118,13204..13324,13434..13613,13740..13845,13939..14044,14129..14284)	Acanthamoeba castellanii str. Neff	14914251
ACA1_332320	CDS	ACA1_332320	NW_004457330.1	14443	15642	R	encoded by transcript ACA1_332320A; uncharacterized protein	complement(join(14443..14697,14871..15066,15249..15340,15451..15642))	Acanthamoeba castellanii str. Neff	14914252
ACA1_332330	CDS	ACA1_332330	NW_004457330.1	16199	16519	D	encoded by transcript ACA1_332330A; uncharacterized protein	join(16199..16402,16469..16519)	Acanthamoeba castellanii str. Neff	14914232
ACA1_332340	CDS	ACA1_332340	NW_004457330.1	16810	17175	D	encoded by transcript ACA1_332340A; uncharacterized protein	16810..17175	Acanthamoeba castellanii str. Neff	14914246
ACA1_332350	CDS	ACA1_332350	NW_004457330.1	17216	19126	D	encoded by transcript ACA1_332350A; [Ribulose-bisphosphate-carboxylase]-lysine N-methyltransferase	join(17216..17420,17523..17674,17780..17908,18072..18188,18263..18602,18767..18888,18989..19126)	Acanthamoeba castellanii str. Neff	14914247
ACA1_332360	CDS	ACA1_332360	NW_004457330.1	19210	20304	R	encoded by transcript ACA1_332360A; acetyltransferase, GNAT superfamily protein	complement(19210..20304)	Acanthamoeba castellanii str. Neff	14914248
ACA1_332470	CDS	ACA1_332470	NW_004457330.1	22755	23783	R	encoded by transcript ACA1_332470A; uncharacterized protein	complement(join(22755..22982,23069..23224,23323..23469,23553..23626,23729..23783))	Acanthamoeba castellanii str. Neff	14914249
ACA1_332490	CDS	ACA1_332490	NW_004457330.1	26729	27720	D	encoded by transcript ACA1_332490A; stretchresponsive fibronectin protein type 3, putative	join(26729..27013,27123..27374,27478..27720)	Acanthamoeba castellanii str. Neff	14914253
ACA1_332500	CDS	ACA1_332500	NW_004457330.1	27786	31099	R	encoded by transcript ACA1_332500A; uncharacterized protein	complement(join(27786..28050,28238..28320,28409..28474,28548..28613,28707..28826,28932..29009,29164..29270,29393..29483,29828..29938,30012..30095,30176..30243,30334..30408,30516..30639,30753..30893,31073..31099))	Acanthamoeba castellanii str. Neff	14914254
ACA1_332510	CDS	ACA1_332510	NW_004457330.1	31257	34535	R	encoded by transcript ACA1_332510A; Rab9 effector protein, putative	complement(join(31257..32193,32278..32711,32844..32944,33032..33091,33176..33253,33384..33542,33639..33794,33892..34044,34171..34294,34431..34535))	Acanthamoeba castellanii str. Neff	14914255
ACA1_332520	CDS	ACA1_332520	NW_004457330.1	34622	35457	D	encoded by transcript ACA1_332520A; ankyrin repeat protein	join(34622..34698,34770..34807,34905..35001,35098..35216,35303..35457)	Acanthamoeba castellanii str. Neff	14914256
ACA1_332530	CDS	ACA1_332530	NW_004457330.1	35557	36106	R	encoded by transcript ACA1_332530A; uncharacterized protein	complement(join(35557..35920,36033..36106))	Acanthamoeba castellanii str. Neff	14914257
ACA1_332540	CDS	ACA1_332540	NW_004457330.1	36929	38014	R	encoded by transcript ACA1_332540A; uncharacterized protein	complement(join(36929..36958,37416..37507,37541..37745,37870..37941,37958..38014))	Acanthamoeba castellanii str. Neff	14914258
ACA1_332550	CDS	ACA1_332550	NW_004457330.1	39821	40078	D	encoded by transcript ACA1_332550A; uncharacterized protein	39821..40078	Acanthamoeba castellanii str. Neff	14914236
ACA1_332560	CDS	ACA1_332560	NW_004457330.1	40533	40859	D	encoded by transcript ACA1_332560A; uncharacterized protein	join(40533..40650,40690..40859)	Acanthamoeba castellanii str. Neff	14914237
ACA1_332570	CDS	ACA1_332570	NW_004457330.1	41164	41562	D	encoded by transcript ACA1_332570A; uncharacterized protein	join(41164..41447,41484..41562)	Acanthamoeba castellanii str. Neff	14914238
ACA1_332580	CDS	ACA1_332580	NW_004457330.1	41766	41981	R	encoded by transcript ACA1_332580A; uncharacterized protein	complement(41766..41981)	Acanthamoeba castellanii str. Neff	14914239
ACA1_332590	CDS	ACA1_332590	NW_004457330.1	42128	43708	R	encoded by transcript ACA1_332590A; endo1,3(4)-beta-glucanase	complement(join(42128..42359,42457..42553,42657..42732,42810..42865,42944..43019,43096..43190,43268..43429,43522..43708))	Acanthamoeba castellanii str. Neff	14914240
ACA1_332600	CDS	ACA1_332600	NW_004457330.1	43968	45696	R	encoded by transcript ACA1_332600A; uncharacterized protein	complement(join(43968..44028,44104..44251,44382..44478,44664..44786,44879..45012,45056..45182,45255..45323,45385..45696))	Acanthamoeba castellanii str. Neff	14914241
ACA1_332710	CDS	ACA1_332710	NW_004457330.1	45843	48022	R	encoded by transcript ACA1_332710A; Fbox domain containing protein	complement(join(45843..46023,46095..46191,46607..46773,46857..46894,46937..47050,47146..47316,47420..47729,47772..48022))	Acanthamoeba castellanii str. Neff	14914242
ACA1_332820	CDS	ACA1_332820	NW_004457330.1	48299	49642	D	encoded by transcript ACA1_332820A; Sel1 repeatcontaining protein	join(48299..48411,48502..49642)	Acanthamoeba castellanii str. Neff	14914243
ACA1_332830	CDS	ACA1_332830	NW_004457330.1	49777	54612	R	encoded by transcript ACA1_332830A; protein kinase domain containing protein	complement(join(49777..49805,49976..50065,50147..50527,50602..50822,52800..52940,53025..53193,53280..53687,53760..53959,54050..54218,54297..54612))	Acanthamoeba castellanii str. Neff	14914244
ACA1_332940	CDS	ACA1_332940	NW_004457330.1	55308	56904	D	encoded by transcript ACA1_332940A; uncharacterized protein	join(55308..55505,55613..55735,55853..55990,56094..56208,56297..56481,56539..56614,56696..>56904)	Acanthamoeba castellanii str. Neff	14914245
ACA1_037700	CDS	ACA1_037700	NW_004457329.1	1407	5047	D	encoded by transcript ACA1_037700A; GTPase activating protein, putative	join(1407..1539,1650..1780,1847..1924,1989..2159,2231..2325,2418..2517,2592..2690,2819..2938,3027..3179,3261..3422,3514..3621,3721..3844,3927..4093,4159..4269,4375..4486,4565..4748,4834..5047)	Acanthamoeba castellanii str. Neff	14914199
ACA1_037720	CDS	ACA1_037720	NW_004457329.1	7042	8888	D	encoded by transcript ACA1_037720A; Fbox domain containing protein	join(7042..7169,7295..7403,7530..7586,7688..7834,7944..8888)	Acanthamoeba castellanii str. Neff	14914219
ACA1_037730	CDS	ACA1_037730	NW_004457329.1	9047	10864	D	encoded by transcript ACA1_037730A; uncharacterized protein	join(9047..9257,9332..9408,9493..9598,9670..10181,10254..10361,10447..10585,10662..10864)	Acanthamoeba castellanii str. Neff	14914220
ACA1_037740	CDS	ACA1_037740	NW_004457329.1	11026	13886	R	encoded by transcript ACA1_037740A; uncharacterized protein	complement(join(11026..11106,11210..11361,11440..11721,11814..11910,12059..12162,12240..12376,12583..12656,12766..12869,12958..13020,13115..13205,13381..13444,13540..13584,13753..13886))	Acanthamoeba castellanii str. Neff	14914221
ACA1_037750	CDS	ACA1_037750	NW_004457329.1	14102	14576	R	encoded by transcript ACA1_037750A; threonyltRNA synthetase, putative	complement(join(14102..14336,14443..14576))	Acanthamoeba castellanii str. Neff	14914203
ACA1_037760	CDS	ACA1_037760	NW_004457329.1	14660	17392	R	encoded by transcript ACA1_037760A; threonine-tRNA ligase	complement(join(14660..14914,14999..15097,15189..15292,15382..15520,15606..15837,15893..16031,16089..16230,16341..16437,16522..16654,16791..16941,17040..17146,17227..17392))	Acanthamoeba castellanii str. Neff	14914204
ACA1_037770	CDS	ACA1_037770	NW_004457329.1	17850	19423	D	encoded by transcript ACA1_037770A; phosphotransferase enzyme domain containing protein	join(17850..17957,18035..18104,18179..18286,18358..18494,18548..18671,18756..18835,18919..19278,19337..19423)	Acanthamoeba castellanii str. Neff	14914205
ACA1_037780	CDS	ACA1_037780	NW_004457329.1	19943	25790	D	encoded by transcript ACA1_037780A; RhoGEF domain containing protein	join(19943..20298,20423..20588,20675..21125,21216..21302,21399..21487,21561..21644,21726..21824,21921..22226,22305..22436,22546..22777,22860..23009,23089..23191,23276..23863,23951..24668,24780..25411,25484..25790)	Acanthamoeba castellanii str. Neff	14914170
ACA1_037790	CDS	ACA1_037790	NW_004457329.1	26249	26752	D	encoded by transcript ACA1_037790A; uncharacterized protein	26249..26752	Acanthamoeba castellanii str. Neff	14914171
ACA1_037800	CDS	ACA1_037800	NW_004457329.1	27101	28051	R	encoded by transcript ACA1_037800A; uncharacterized protein	complement(join(27101..27375,27454..27631,27688..27810,27869..28051))	Acanthamoeba castellanii str. Neff	14914200
ACA1_037810	CDS	ACA1_037810	NW_004457329.1	28149	28775	R	encoded by transcript ACA1_037810A; dual specificity phosphatase, putative	complement(join(28149..28553,28620..28775))	Acanthamoeba castellanii str. Neff	14914201
ACA1_037820	CDS	ACA1_037820	NW_004457329.1	28969	30492	R	encoded by transcript ACA1_037820A; uncharacterized protein	complement(join(28969..29237,29334..29488,29555..29804,29888..30011,30092..30238,30340..30492))	Acanthamoeba castellanii str. Neff	14914202
ACA1_037830	CDS	ACA1_037830	NW_004457329.1	31396	33561	D	encoded by transcript ACA1_037830A; uncharacterized protein	join(31396..31468,31553..31610,31725..31844,31941..32100,32193..32277,32360..32416,32517..32810,32892..33161,33233..33561)	Acanthamoeba castellanii str. Neff	14914192
ACA1_037840	CDS	ACA1_037840	NW_004457329.1	33740	34997	R	encoded by transcript ACA1_037840A; uncharacterized protein	complement(join(33740..34001,34091..34232,34306..34495,34564..34677,34742..34843,34917..34997))	Acanthamoeba castellanii str. Neff	14914193
ACA1_037850	CDS	ACA1_037850	NW_004457329.1	35141	41954	R	encoded by transcript ACA1_037850A; serine/threonine kinase	complement(join(35141..35248,35321..35814,35908..36487,36536..36653,36739..37031,37110..37467,37553..37872,37939..37983,38055..38171,38269..38445,38544..38675,38752..39104,39177..39632,39699..39765,39865..39962,40074..40241,40313..40388,40464..40778,40865..40982,41130..41311,41479..41753,41861..41954))	Acanthamoeba castellanii str. Neff	14914206
ACA1_037860	CDS	ACA1_037860	NW_004457329.1	42470	45599	R	encoded by transcript ACA1_037860A; ABC transporter ATPase/permease	complement(join(42470..42699,42766..42855,42975..43088,43194..43344,43412..43536,43621..43741,43836..43966,44034..44127,44198..44301,44362..44424,44497..44601,44701..44785,44856..44904,44985..45118,45198..45599))	Acanthamoeba castellanii str. Neff	14914207
ACA1_037870	CDS	ACA1_037870	NW_004457329.1	45866	50760	D	encoded by transcript ACA1_037870A; vacuolar protein sortingassociated protein 11, putative	join(45866..45907,46220..46381,46470..46704,46798..46898,46990..47070,47136..47254,47345..47477,47549..47703,47785..47908,47999..48100,48161..48250,48310..48408,48495..48606,48699..48733,48837..48974,49057..49131,49223..49311,49397..49471,49542..49716,49789..49937,50047..50164,50259..50354,50439..50531,50635..50760)	Acanthamoeba castellanii str. Neff	14914208
ACA1_037880	CDS	ACA1_037880	NW_004457329.1	50628	51781	R	encoded by transcript ACA1_037880A; Poly(3hydroxybutyrate) depolymerase	complement(join(50628..51413,51479..51781))	Acanthamoeba castellanii str. Neff	14914163
ACA1_037900	CDS	ACA1_037900	NW_004457329.1	53006	54838	R	encoded by transcript ACA1_037900A; hydrolase, NUDIX family protein	complement(join(53006..53314,53420..53753,53842..53936,54022..54138,54211..54302,54378..54489,54554..54638,54720..54838))	Acanthamoeba castellanii str. Neff	14914165
ACA1_037910	CDS	ACA1_037910	NW_004457329.1	55389	55649	R	encoded by transcript ACA1_037910A; uncharacterized protein	complement(55389..55649)	Acanthamoeba castellanii str. Neff	14914166
ACA1_037920	CDS	ACA1_037920	NW_004457329.1	56154	58169	D	encoded by transcript ACA1_037920A; WD repeatcontaining protein	join(56154..56340,56431..56519,56590..56696,56761..56879,56963..57024,57093..57188,57266..57412,57506..57646,57725..57830,57910..58169)	Acanthamoeba castellanii str. Neff	14914167
ACA1_037930	CDS	ACA1_037930	NW_004457329.1	58407	59311	D	encoded by transcript ACA1_037930A; uncharacterized protein	join(58407..58532,58670..58824,58928..59089,59194..59311)	Acanthamoeba castellanii str. Neff	14914168
ACA1_037940	CDS	ACA1_037940	NW_004457329.1	59992	61530	R	encoded by transcript ACA1_037940A; Hypothetical protein	complement(join(59992..60108,60211..60344,60412..60493,60576..60706,60786..60974,61084..61143,61270..61372,61483..61530))	Acanthamoeba castellanii str. Neff	14914209
ACA1_038050	CDS	ACA1_038050	NW_004457329.1	61808	62386	D	encoded by transcript ACA1_038050A; Ras family protein rasG, putative	join(<61808..61984,62068..62191,62289..62386)	Acanthamoeba castellanii str. Neff	14914210
ACA1_038070	CDS	ACA1_038070	NW_004457329.1	65623	66111	R	encoded by transcript ACA1_038070A; uncharacterized protein	complement(65623..66111)	Acanthamoeba castellanii str. Neff	14914212
ACA1_038080	CDS	ACA1_038080	NW_004457329.1	66502	68371	D	encoded by transcript ACA1_038080A; hydrolase, alpha/beta fold domain containing protein	join(66502..66670,66749..66783,66872..66969,67059..67116,67201..67309,67393..67482,67570..67655,67739..67883,67945..68018,68105..68371)	Acanthamoeba castellanii str. Neff	14914213
ACA1_038090	CDS	ACA1_038090	NW_004457329.1	68473	70312	R	encoded by transcript ACA1_038090A; serine/threonine kinase	complement(join(68473..68565,68639..68980,69148..69288,69382..69636,69737..69886,70037..70312))	Acanthamoeba castellanii str. Neff	14914214
ACA1_038110	CDS	ACA1_038110	NW_004457329.1	73509	75229	R	encoded by transcript ACA1_038110A; glycosyltransferase family 8 protein	complement(join(73509..74279,74354..74645,74705..74782,74860..75016,75091..75229))	Acanthamoeba castellanii str. Neff	14914216
ACA1_038120	CDS	ACA1_038120	NW_004457329.1	76033	77340	R	encoded by transcript ACA1_038120A; uncharacterized protein	complement(join(76033..76117,76189..76931,77068..77340))	Acanthamoeba castellanii str. Neff	14914217
ACA1_038130	CDS	ACA1_038130	NW_004457329.1	78321	78803	R	encoded by transcript ACA1_038130A; ribosomal protein L35Ae, putative	complement(join(78321..78627,78784..78803))	Acanthamoeba castellanii str. Neff	14914218
ACA1_038140	CDS	ACA1_038140	NW_004457329.1	79044	80908	D	encoded by transcript ACA1_038140A; origin recognition complex2, putative	join(79044..79411,79485..79617,79708..79809,79940..80038,80120..80192,80262..80390,80484..80606,80685..80908)	Acanthamoeba castellanii str. Neff	14914153
ACA1_038150	CDS	ACA1_038150	NW_004457329.1	81013	83847	R	encoded by transcript ACA1_038150A; cation efflux family superfamily protein	complement(join(81013..81186,81274..81477,81565..81672,81763..81904,81980..82097,82222..82338,82401..82484,82571..82624,82711..82797,82917..82968,83075..83170,83263..83579,83721..83847))	Acanthamoeba castellanii str. Neff	14914154
ACA1_038160	CDS	ACA1_038160	NW_004457329.1	84052	86731	R	encoded by transcript ACA1_038160A; Cyclindependent kinase	complement(join(84052..84420,84474..84607,84677..84831,84851..84972,85000..85099,85186..85509,85606..85780,85893..86060,86131..86224,86306..86387,86637..86731))	Acanthamoeba castellanii str. Neff	14914155
ACA1_038170	CDS	ACA1_038170	NW_004457329.1	87156	87827	D	encoded by transcript ACA1_038170A; uncharacterized protein	join(87156..87218,87594..87669,87751..87827)	Acanthamoeba castellanii str. Neff	14914156
ACA1_038180	CDS	ACA1_038180	NW_004457329.1	88077	91599	D	encoded by transcript ACA1_038180A; FHA domain containing protein	join(88077..89150,89182..90337,90407..90497,90572..90704,90795..90905,91004..91146,91233..91599)	Acanthamoeba castellanii str. Neff	14914157
ACA1_038190	CDS	ACA1_038190	NW_004457329.1	92055	93262	D	encoded by transcript ACA1_038190A; RasG, putative	join(92055..92152,92288..92315,92383..92440,92713..92888,92972..93095,93165..93262)	Acanthamoeba castellanii str. Neff	14914158
ACA1_038200	CDS	ACA1_038200	NW_004457329.1	93912	96308	D	encoded by transcript ACA1_038200A; Fbox domain containing protein	join(93912..94086,94198..94856,94900..95035,95105..95164,95253..95316,95418..95563,95683..95871,96013..96308)	Acanthamoeba castellanii str. Neff	14914159
ACA1_038210	CDS	ACA1_038210	NW_004457329.1	96428	98036	R	encoded by transcript ACA1_038210A; uncharacterized protein	complement(join(96428..96790,96940..97097,97191..97245,97330..97386,97477..97563,97686..98036))	Acanthamoeba castellanii str. Neff	14914160
ACA1_038220	CDS	ACA1_038220	NW_004457329.1	98088	101916	R	encoded by transcript ACA1_038220A; ubiquitin carboxyl-terminal hydrolase	complement(join(98088..98236,98336..98412,98499..98565,98696..98757,98834..99353,99447..99792,99893..99963,100050..100548,100788..100931,100975..101271,101337..101543,101647..101916))	Acanthamoeba castellanii str. Neff	14914161
ACA1_038230	CDS	ACA1_038230	NW_004457329.1	102089	103095	R	encoded by transcript ACA1_038230A; START domain containing protein	complement(join(102089..102198,102282..102373,102457..102614,102701..102829,102937..103095))	Acanthamoeba castellanii str. Neff	14914162
ACA1_038240	CDS	ACA1_038240	NW_004457329.1	103416	108362	D	encoded by transcript ACA1_038240A; glycosyl hydrolase, putative	join(103416..103485,103596..103747,103916..104026,104119..104209,104299..104439,104518..104626,104722..104807,104907..105000,105110..105259,105365..105441,105531..105643,105815..105899,105983..106041,106127..106302,106384..106517,106601..106677,106746..106818,106889..107156,107270..107585,107686..108064,108187..108362)	Acanthamoeba castellanii str. Neff	14914172
ACA1_038250	CDS	ACA1_038250	NW_004457329.1	108565	109279	R	encoded by transcript ACA1_038250A; uncharacterized protein	complement(join(108565..108616,108684..108789,108872..109010,109112..109279))	Acanthamoeba castellanii str. Neff	14914173
ACA1_038260	CDS	ACA1_038260	NW_004457329.1	109355	112760	R	encoded by transcript ACA1_038260A; protein kinase	complement(join(109355..109717,109802..110002,110095..111114,111183..111262,111279..111359,111444..111595,111700..111863,111955..112101,112230..112633,112712..112760))	Acanthamoeba castellanii str. Neff	14914174
ACA1_038270	CDS	ACA1_038270	NW_004457329.1	113363	113800	D	encoded by transcript ACA1_038270A; uncharacterized protein	join(113363..113531,113610..113800)	Acanthamoeba castellanii str. Neff	14914175
ACA1_038280	CDS	ACA1_038280	NW_004457329.1	114012	118983	D	encoded by transcript ACA1_038280A; splicing factor 3b subunit 3, putative	join(114012..114225,114339..114521,114579..114817,114895..115137,115203..115381,115447..115600,115674..115926,116010..116312,116404..116665,116734..116946,117039..117255,117344..117491,117570..117764,117861..118081,118161..118364,118451..118659,118737..118983)	Acanthamoeba castellanii str. Neff	14914176
ACA1_038290	CDS	ACA1_038290	NW_004457329.1	119184	119934	R	encoded by transcript ACA1_038290A; uncharacterized protein	complement(join(119184..119331,119648..119934))	Acanthamoeba castellanii str. Neff	14914177
ACA1_038300	CDS	ACA1_038300	NW_004457329.1	120026	120591	D	encoded by transcript ACA1_038300A; GCN5 family protein 1 (GCN5L1) protein	join(120026..120086,120176..120381,120469..120591)	Acanthamoeba castellanii str. Neff	14914178
ACA1_038310	CDS	ACA1_038310	NW_004457329.1	120687	121628	R	encoded by transcript ACA1_038310A; 4'-phosphopantetheinyl transferase superfamily protein	complement(120687..121628)	Acanthamoeba castellanii str. Neff	14914179
ACA1_038320	CDS	ACA1_038320	NW_004457329.1	121707	122510	D	encoded by transcript ACA1_038320A; triosephosphate isomerase	join(121707..122280,122350..122510)	Acanthamoeba castellanii str. Neff	14914180
ACA1_038330	CDS	ACA1_038330	NW_004457329.1	122589	124502	R	encoded by transcript ACA1_038330A; saccharopine dehydrogenase	complement(join(122589..122834,122907..122982,123094..123214,123289..123410,123601..123727,123767..123861,123942..124019,124138..124502))	Acanthamoeba castellanii str. Neff	14914181
ACA1_038340	CDS	ACA1_038340	NW_004457329.1	124762	129267	R	encoded by transcript ACA1_038340A; Ras protein activator like 1, putative	complement(join(124762..124851,124927..125139,125213..125429,125517..125612,125703..125815,125888..126030,126104..126308,126390..126548,126623..126710,126781..126874,126948..127032,127096..127256,127336..127549,127640..127794,127886..127957,128037..129267))	Acanthamoeba castellanii str. Neff	14914182
ACA1_038350	CDS	ACA1_038350	NW_004457329.1	129868	134286	R	encoded by transcript ACA1_038350A; Fbox domain containing protein	complement(join(129868..130541,130575..131015,131096..131260,131326..131398,131473..131523,131602..131680,131745..131810,131903..132125,132206..132294,132364..132435,132507..132573,132645..132756,132839..132942,133009..133112,133190..133371,133508..133573,133664..133686,133749..133913,133993..134164,134227..134286))	Acanthamoeba castellanii str. Neff	14914183
ACA1_038360	CDS	ACA1_038360	NW_004457329.1	134453	135600	D	encoded by transcript ACA1_038360A; kelch repeatcontaining protein	join(134453..134795,134895..134999,135113..135600)	Acanthamoeba castellanii str. Neff	14914184
ACA1_038370	CDS	ACA1_038370	NW_004457329.1	136271	137597	D	encoded by transcript ACA1_038370A; uncharacterized protein	join(136271..136327,136425..136517,136623..137597)	Acanthamoeba castellanii str. Neff	14914185
ACA1_038380	CDS	ACA1_038380	NW_004457329.1	137734	138003	R	encoded by transcript ACA1_038380A; dynein light chain 1, cytoplasmic, putative	complement(137734..138003)	Acanthamoeba castellanii str. Neff	14914186
ACA1_038390	CDS	ACA1_038390	NW_004457329.1	138104	139328	D	encoded by transcript ACA1_038390A; R3H domain containing protein	join(138104..138185,138255..138411,138524..138656,138760..138843,138924..139055,139146..139328)	Acanthamoeba castellanii str. Neff	14914187
ACA1_038400	CDS	ACA1_038400	NW_004457329.1	139574	142472	D	encoded by transcript ACA1_038400A; uncharacterized protein	join(139574..140634,140681..140794,140940..141011,141117..141259,141346..141573,141668..141780,141859..141949,142027..142211,142314..142472)	Acanthamoeba castellanii str. Neff	14914188
ACA1_038410	CDS	ACA1_038410	NW_004457329.1	142811	143830	D	encoded by transcript ACA1_038410A; uncharacterized protein	join(142811..143014,143217..143246,143305..143421,143494..143591,143656..143830)	Acanthamoeba castellanii str. Neff	14914189
ACA1_038420	CDS	ACA1_038420	NW_004457329.1	144054	146282	R	encoded by transcript ACA1_038420A; succinylglutamate desuccinylase/aspartoacylase, putative	complement(join(144054..144163,144234..144338,144403..144545,144642..144740,144819..144930,145011..145151,145231..145390,145470..145658,145773..146282))	Acanthamoeba castellanii str. Neff	14914190
ACA1_038430	CDS	ACA1_038430	NW_004457329.1	146614	148937	D	encoded by transcript ACA1_038430A; uncharacterized protein	join(146614..146759,146854..146959,147035..147108,147179..147368,147431..147633,147696..147820,147910..148030,148103..148256,148329..148454,148538..148705,148776..148937)	Acanthamoeba castellanii str. Neff	14914191
ACA1_038440	CDS	ACA1_038440	NW_004457329.1	149126	149572	R	encoded by transcript ACA1_038440A; uncharacterized protein	complement(join(149126..149214,149293..149572))	Acanthamoeba castellanii str. Neff	14914222
ACA1_038450	CDS	ACA1_038450	NW_004457329.1	150530	152418	R	encoded by transcript ACA1_038450A; uncharacterized protein	complement(join(150530..151107,151177..151504,151593..151811,151900..151992,152159..152223,152373..152418))	Acanthamoeba castellanii str. Neff	14914223
ACA1_038460	CDS	ACA1_038460	NW_004457329.1	152860	154070	D	encoded by transcript ACA1_038460A; Actin1	join(152860..153227,153311..154070)	Acanthamoeba castellanii str. Neff	14914224
ACA1_038470	CDS	ACA1_038470	NW_004457329.1	154705	156567	R	encoded by transcript ACA1_038470A; peptidase, M20/M25/M40 superfamily protein	complement(join(154705..154781,154854..154959,155047..155193,155259..155363,155441..155616,155690..155758,155799..156017,156082..156213,156261..156336,156412..156567))	Acanthamoeba castellanii str. Neff	14914225
ACA1_038480	CDS	ACA1_038480	NW_004457329.1	156676	162530	D	encoded by transcript ACA1_038480A; leucine rich repeat containing protein	join(156676..157212,157286..157539,157696..157837,157954..158306,158407..159240,159324..159475,159569..159722,159814..160022,160137..160269,160387..160495,160565..160749,160832..160986,161053..162212,162273..162530)	Acanthamoeba castellanii str. Neff	14914226
ACA1_038490	CDS	ACA1_038490	NW_004457329.1	162635	164990	R	encoded by transcript ACA1_038490A; asparagine synthase (glutaminehydrolyzing), putative	complement(join(162635..162766,162861..163020,163111..163571,163700..164215,164357..164431,164577..164814,164911..164990))	Acanthamoeba castellanii str. Neff	14914227
ACA1_038500	CDS	ACA1_038500	NW_004457329.1	165341	165794	R	encoded by transcript ACA1_038500A; mitochondrial import inner membrane translocase subunit tim16, putative	complement(join(165341..165466,165536..165633,165704..>165794))	Acanthamoeba castellanii str. Neff	14914228
ACA1_038510	CDS	ACA1_038510	NW_004457329.1	166108	168095	R	encoded by transcript ACA1_038510A; elongation factor Tu GTP binding domain containing protein	complement(join(166108..167284,167377..167444,167472..167593,167678..167865,167956..168095))	Acanthamoeba castellanii str. Neff	14914229
ACA1_038520	CDS	ACA1_038520	NW_004457329.1	168529	170435	D	encoded by transcript ACA1_038520A; Myblike DNA-binding protein, putative	join(168529..168685,168768..169131,169222..169291,169405..169557,169715..169862,169947..170244,170339..170435)	Acanthamoeba castellanii str. Neff	14914230
ACA1_038530	CDS	ACA1_038530	NW_004457329.1	170496	173963	R	encoded by transcript ACA1_038530A; AMPbinding enzyme, putative	complement(join(170496..170684,170771..170942,171018..171140,171228..171351,171442..171528,171554..171624,171737..171860,171958..172162,172206..172332,172418..172518,172591..172683,172758..172922,173013..173123,173282..173486,173574..173740,173814..173963))	Acanthamoeba castellanii str. Neff	14914231
ACA1_038540	CDS	ACA1_038540	NW_004457329.1	174651	176580	D	encoded by transcript ACA1_038540A; Ubiquitinconjugating enzyme subfamily protein	join(174651..174837,174898..174996,175106..175287,175360..175477,175559..175677,175755..175869,175947..176117,176198..176284,176348..176580)	Acanthamoeba castellanii str. Neff	14914194
ACA1_038550	CDS	ACA1_038550	NW_004457329.1	177108	181660	D	encoded by transcript ACA1_038550A; phosphoglucomutase, putative	join(177108..177503,177721..178737,178821..179433,179511..179689,179799..180779,180861..180999,181077..181660)	Acanthamoeba castellanii str. Neff	14914195
ACA1_038560	CDS	ACA1_038560	NW_004457329.1	181689	183146	R	encoded by transcript ACA1_038560A; regulator of chromosome condensation (RCC1) repeat domain containing protein	complement(join(181689..181703,181823..182034,182091..182261,182478..182639,182743..182958,183029..>183146))	Acanthamoeba castellanii str. Neff	14914196
ACA1_038570	CDS	ACA1_038570	NW_004457329.1	183527	185668	R	encoded by transcript ACA1_038570A; AlphaL-fucosidase	complement(join(183527..183911,183977..184093,184200..184637,184697..184772,184872..184935,185025..185122,185209..185291,185381..185473,185604..185668))	Acanthamoeba castellanii str. Neff	14914197
ACA1_038580	CDS	ACA1_038580	NW_004457329.1	185925	186122	D	encoded by transcript ACA1_038580A; uncharacterized protein	185925..>186122	Acanthamoeba castellanii str. Neff	14914198
ACA1_024150	CDS	ACA1_024150	NW_004457328.1	443	2104	D	encoded by transcript ACA1_024150A; uncharacterized protein	join(443..485,598..719,825..981,1062..1125,1203..1323,1422..1501,1616..1633,1712..1949,2030..2104)	Acanthamoeba castellanii str. Neff	14914143
ACA1_024160	CDS	ACA1_024160	NW_004457328.1	2353	7254	R	encoded by transcript ACA1_024160A; serine/threonine kinase	complement(join(2353..2462,2536..2626,2711..2890,3004..3204,3281..3449,3522..3651,3727..3862,3936..4024,4093..4297,4380..4466,4543..4838,4913..4955,5040..5195,5267..5441,5531..5679,5743..5940,5995..6527,6595..6766,6835..7254))	Acanthamoeba castellanii str. Neff	14914142
ACA1_024170	CDS	ACA1_024170	NW_004457328.1	7485	8744	R	encoded by transcript ACA1_024170A; jumonji domain containing 8, putative	complement(join(7485..7533,7765..7954,8021..8117,8174..8356,8410..8488,8569..8744))	Acanthamoeba castellanii str. Neff	14914141
ACA1_024180	CDS	ACA1_024180	NW_004457328.1	8981	10499	D	encoded by transcript ACA1_024180A; mitochondrial carrier protein	join(8981..9136,9209..9283,9371..9505,9591..9697,9789..9879,9950..10022,10105..10265,10371..10499)	Acanthamoeba castellanii str. Neff	14914144
ACA1_024190	CDS	ACA1_024190	NW_004457328.1	10639	13062	R	encoded by transcript ACA1_024190A; uncharacterized protein	complement(join(10639..10829,10902..13062))	Acanthamoeba castellanii str. Neff	14914145
ACA1_024200	CDS	ACA1_024200	NW_004457328.1	13381	16996	R	encoded by transcript ACA1_024200A; WD domain, G-beta repeat-containing protein	complement(join(13381..13538,13627..13737,13850..13941,14015..14171,14279..14349,14439..14633,14720..14804,14885..15012,15095..15319,15409..15525,15619..15696,15766..15882,15939..16996))	Acanthamoeba castellanii str. Neff	14914146
ACA1_024210	CDS	ACA1_024210	NW_004457328.1	17438	18796	R	encoded by transcript ACA1_024210A; DnaJ family protein	complement(join(17438..17575,17669..17910,17997..18104,18183..18365,18475..18796))	Acanthamoeba castellanii str. Neff	14914147
ACA1_024220	CDS	ACA1_024220	NW_004457328.1	19577	21813	D	encoded by transcript ACA1_024220A; purinergic receptor, putative	join(19577..19681,19765..19818,19928..20004,20239..20325,20407..20479,20588..20702,20770..20859,20963..21145,21229..21314,21421..21483,21590..21653,21737..21813)	Acanthamoeba castellanii str. Neff	14914148
ACA1_024230	CDS	ACA1_024230	NW_004457328.1	22039	22543	R	encoded by transcript ACA1_024230A; subtilisin, putative	complement(join(22039..22124,22192..22275,22348..22428,22534..22543))	Acanthamoeba castellanii str. Neff	14914149
ACA1_024240	CDS	ACA1_024240	NW_004457328.1	22820	24574	R	encoded by transcript ACA1_024240A; Yip1 domain containing protein	complement(join(22820..22960,23039..23132,23216..23368,23444..23535,23615..23674,23765..23869,23951..24011,24104..24287,24388..24574))	Acanthamoeba castellanii str. Neff	14914150
ACA1_024250	CDS	ACA1_024250	NW_004457328.1	24941	27567	R	encoded by transcript ACA1_024250A; uncharacterized protein	complement(join(24941..25128,25330..25429,25500..25613,25679..25796,25810..25835,25904..26095,26127..26338,26415..26504,26560..26757,26832..26906,26969..27166,27294..27567))	Acanthamoeba castellanii str. Neff	14914151
ACA1_024260	CDS	ACA1_024260	NW_004457328.1	27941	29059	R	encoded by transcript ACA1_024260A; Cell division cycle 7related protein kinase	complement(join(27941..28081,28204..28304,28439..28554,28626..28690,28771..28898,29010..>29059))	Acanthamoeba castellanii str. Neff	14914152
ACA1_084040	CDS	ACA1_084040	NW_004457327.1	86	1245	R	encoded by transcript ACA1_084040A; uncharacterized protein	complement(join(<86..729,850..990,1095..>1245))	Acanthamoeba castellanii str. Neff	14914138
ACA1_084150	CDS	ACA1_084150	NW_004457327.1	3720	5704	R	encoded by transcript ACA1_084150A; regulator of chromosome condensation (RCC1) repeat domain containing protein	complement(join(<3720..3949,4040..4215,4416..4437,4540..4695,4811..5006,5174..5327,5472..5493,5587..>5704))	Acanthamoeba castellanii str. Neff	14914140
ACA1_084260	CDS	ACA1_084260	NW_004457327.1	6022	8804	R	encoded by transcript ACA1_084260A; uncharacterized protein	complement(join(<6022..6261,6378..6495,6591..6758,6837..6918,7003..7075,7189..7298,7381..7604,7713..7792,7890..7935,8014..8165,8298..8398,8504..8570,8679..8804))	Acanthamoeba castellanii str. Neff	14914134
ACA1_084370	CDS	ACA1_084370	NW_004457327.1	12422	14418	D	encoded by transcript ACA1_084370A; DnaJ domain containing protein	join(12422..12584,12670..13084,13226..13358,13481..13605,13721..14015,14176..14418)	Acanthamoeba castellanii str. Neff	14914139
ACA1_084380	CDS	ACA1_084380	NW_004457327.1	14789	15295	D	encoded by transcript ACA1_084380A; NHL repeat containing protein	join(14789..14852,14922..15295)	Acanthamoeba castellanii str. Neff	14914135
ACA1_084390	CDS	ACA1_084390	NW_004457327.1	15584	20430	R	encoded by transcript ACA1_084390A; uncharacterized protein	complement(join(15584..15790,15884..15961,16321..16488,16585..16794,16918..17034,17103..17168,17267..17350,17433..17573,17665..17797,17877..17935,18793..18843,18941..19045,19129..19241,19396..19591,19673..19813,19916..20017,20111..20239,20299..20430))	Acanthamoeba castellanii str. Neff	14914136
ACA1_084500	CDS	ACA1_084500	NW_004457327.1	20938	21591	D	encoded by transcript ACA1_084500A; C2 domain containing protein	join(20938..21022,21082..21259,21409..>21591)	Acanthamoeba castellanii str. Neff	14914137
ACA1_358270	CDS	ACA1_358270	NW_004457326.1	1443	2851	R	encoded by transcript ACA1_358270A; pyridine nucleotidedisulfide oxidoreductase domain containing protein	complement(join(<1443..1636,1750..1842,1915..2024,2114..2246,2351..2410,2535..2611,2697..2851))	Acanthamoeba castellanii str. Neff	14914124
ACA1_358380	CDS	ACA1_358380	NW_004457326.1	3977	4411	R	encoded by transcript ACA1_358380A; uncharacterized protein	complement(<3977..4411)	Acanthamoeba castellanii str. Neff	14914116
ACA1_358490	CDS	ACA1_358490	NW_004457326.1	5470	5857	R	encoded by transcript ACA1_358490A; endonuclease iii, putative	complement(join(<5470..5568,5630..5716,5786..5857))	Acanthamoeba castellanii str. Neff	14914123
ACA1_358500	CDS	ACA1_358500	NW_004457326.1	7629	10292	D	encoded by transcript ACA1_358500A; uncharacterized protein	join(7629..7750,10091..10166,10212..10292)	Acanthamoeba castellanii str. Neff	14914117
ACA1_358610	CDS	ACA1_358610	NW_004457326.1	11819	13340	R	encoded by transcript ACA1_358610A; uncharacterized protein	complement(join(11819..11964,12062..12233,12284..12454,12560..12655,12785..12864,12930..12995,13091..13174,13244..13340))	Acanthamoeba castellanii str. Neff	14914118
ACA1_358620	CDS	ACA1_358620	NW_004457326.1	13515	15074	R	encoded by transcript ACA1_358620A; Sel1like, putative	complement(13515..15074)	Acanthamoeba castellanii str. Neff	14914119
ACA1_358630	CDS	ACA1_358630	NW_004457326.1	15665	17525	R	encoded by transcript ACA1_358630A; uncharacterized protein	complement(join(15665..15864,15958..16072,16142..16414,16500..17525))	Acanthamoeba castellanii str. Neff	14914120
ACA1_358640	CDS	ACA1_358640	NW_004457326.1	18025	19943	D	encoded by transcript ACA1_358640A; uncharacterized protein	join(18025..18102,18360..18522,18588..18787,18858..18981,19057..19158,19261..19334,19399..19477,19560..19701,19901..19943)	Acanthamoeba castellanii str. Neff	14914121
ACA1_358650	CDS	ACA1_358650	NW_004457326.1	20163	21692	D	encoded by transcript ACA1_358650A; ubiquitin carboxylterminal hydrolase L5, putative	join(20163..20199,20260..20353,20442..20664,20738..20779,20834..20933,21007..21070,21160..21335,21403..21550,21626..21692)	Acanthamoeba castellanii str. Neff	14914122
ACA1_358660	CDS	ACA1_358660	NW_004457326.1	21872	25638	D	encoded by transcript ACA1_358660A; SH3 domain containing protein	join(21872..21973,22150..22304,22432..22463,22558..22606,22692..22752,22841..22903,23091..23162,23259..23320,23400..23463,23556..23609,23708..23829,23903..23974,24056..24150,24247..24432,24529..25106,25149..25226,25296..25344,25436..25475,25563..25638)	Acanthamoeba castellanii str. Neff	14914125
ACA1_358670	CDS	ACA1_358670	NW_004457326.1	26007	26964	D	encoded by transcript ACA1_358670A; uncharacterized protein	join(26007..26321,26439..26522,26613..26694,26789..26964)	Acanthamoeba castellanii str. Neff	14914126
ACA1_358790	CDS	ACA1_358790	NW_004457326.1	30804	43012	R	encoded by transcript ACA1_358790A; uncharacterized protein	complement(join(30804..31721,31801..32844,32920..33046,33116..33459,33550..33785,33883..33931,33944..34477,34557..35318,35409..35648,35755..35994,36090..36329,36400..36639,36719..36958,37034..37513,37618..37857,37943..38182,38277..38516,38596..38835,38944..39183,39272..39511,39618..39857,39936..40175,40265..40323,40456..40636,40714..40953,41025..41083,41161..41659,41728..41876,41983..42166,42245..42336,42481..42679,42878..43012))	Acanthamoeba castellanii str. Neff	14914128
ACA1_358800	CDS	ACA1_358800	NW_004457326.1	43721	47109	R	encoded by transcript ACA1_358800A; phosphatidylcholine acyltransferaselike, putative	complement(join(43721..43949,44017..44177,44189..44262,44338..44493,44569..44697,44791..44943,45045..45514,45608..45698,45784..45900,45972..46220,46298..46424,46675..47109))	Acanthamoeba castellanii str. Neff	14914129
ACA1_358910	CDS	ACA1_358910	NW_004457326.1	47206	47449	R	encoded by transcript ACA1_358910A; uncharacterized protein	complement(join(47206..47295,47381..47449))	Acanthamoeba castellanii str. Neff	14914112
ACA1_359020	CDS	ACA1_359020	NW_004457326.1	51819	53509	D	encoded by transcript ACA1_359020A; HpcH/HpaI aldolase/citrate lyase subfamily protein	join(51819..51824,51933..51981,52066..52266,52321..52391,52525..52833,52907..52990,53177..53322,53413..53509)	Acanthamoeba castellanii str. Neff	14914113
ACA1_359130	CDS	ACA1_359130	NW_004457326.1	56250	58481	R	encoded by transcript ACA1_359130A; uncharacterized protein	complement(join(56250..57040,57244..57745,57816..58100,58165..58193,58307..58481))	Acanthamoeba castellanii str. Neff	14914114
ACA1_359140	CDS	ACA1_359140	NW_004457326.1	59276	61324	D	encoded by transcript ACA1_359140A; uncharacterized protein	join(59276..59425,59477..59564,59638..59888,59953..60061,60138..61324)	Acanthamoeba castellanii str. Neff	14914115
ACA1_359150	CDS	ACA1_359150	NW_004457326.1	61505	62751	R	encoded by transcript ACA1_359150A; uncharacterized protein	complement(join(61505..61971,62041..62195,62314..62447,62521..62751))	Acanthamoeba castellanii str. Neff	14914130
ACA1_359260	CDS	ACA1_359260	NW_004457326.1	68633	69118	R	encoded by transcript ACA1_359260A; actin-1, putative	complement(<68633..69118)	Acanthamoeba castellanii str. Neff	14914131
ACA1_359270	CDS	ACA1_359270	NW_004457326.1	69759	70757	R	encoded by transcript ACA1_359270A; RAB family member (rab7), putative	complement(join(69759..69998,70102..70286,70439..70507,70576..70646,70702..70757))	Acanthamoeba castellanii str. Neff	14914132
ACA1_359280	CDS	ACA1_359280	NW_004457326.1	71043	71849	D	encoded by transcript ACA1_359280A; uncharacterized protein	join(71043..71166,71240..71354,71461..71648,71722..>71849)	Acanthamoeba castellanii str. Neff	14914133
ACA1_305780	CDS	ACA1_305780	NW_004457325.1	541	1238	D	encoded by transcript ACA1_305780A; uncharacterized protein	join(541..562,675..933,986..1238)	Acanthamoeba castellanii str. Neff	14914111
ACA1_305790	CDS	ACA1_305790	NW_004457325.1	2585	3430	R	encoded by transcript ACA1_305790A; uncharacterized protein	complement(2585..3430)	Acanthamoeba castellanii str. Neff	14914110
ACA1_305900	CDS	ACA1_305900	NW_004457325.1	9064	9801	R	encoded by transcript ACA1_305900A; major capsid protein	complement(join(9064..9075,9142..9149,9237..9729,9742..9801))	Acanthamoeba castellanii str. Neff	14914107
ACA1_305910	CDS	ACA1_305910	NW_004457325.1	9806	10093	R	encoded by transcript ACA1_305910A; uncharacterized protein	complement(9806..10093)	Acanthamoeba castellanii str. Neff	14914108
ACA1_306020	CDS	ACA1_306020	NW_004457325.1	14533	15005	D	encoded by transcript ACA1_306020A; uncharacterized protein	join(<14533..14690,14801..>15005)	Acanthamoeba castellanii str. Neff	14914109
ACA1_020090	CDS	ACA1_020090	NW_004457324.1	12	522	R	encoded by transcript ACA1_020090A; cleavage stimulation factor 64kDa subunit	complement(join(<12..138,272..350,477..522))	Acanthamoeba castellanii str. Neff	14914106
ACA1_020100	CDS	ACA1_020100	NW_004457324.1	786	4323	D	encoded by transcript ACA1_020100A; Sec1 family protein	join(786..893,977..1316,1418..1491,1569..1655,1841..1877,1956..2215,2304..2609,2706..2805,2860..2970,3068..3142,3204..3367,3446..3515,3588..3684,3756..4009,4103..4174,4241..4323)	Acanthamoeba castellanii str. Neff	14914104
ACA1_020120	CDS	ACA1_020120	NW_004457324.1	5370	9339	D	encoded by transcript ACA1_020120A; Prokumamolisin, activation domain containing protein	join(5370..5587,5699..5794,5874..5991,6058..6157,6279..6400,6484..6582,7090..7189,7227..7396,7613..7739,7793..7864,8046..8099,8208..8300,8378..8539,8712..8794,8866..8948,9099..9339)	Acanthamoeba castellanii str. Neff	14914101
ACA1_020130	CDS	ACA1_020130	NW_004457324.1	9381	11221	D	encoded by transcript ACA1_020130A; uncharacterized protein	join(9381..9524,9599..11221)	Acanthamoeba castellanii str. Neff	14914102
ACA1_020140	CDS	ACA1_020140	NW_004457324.1	11113	13105	R	encoded by transcript ACA1_020140A; ADPribosylarginine hydrolase	complement(join(11113..11393,11492..11622,11713..11765,11943..12023,12164..12235,12519..12641,12762..12868,12958..13105))	Acanthamoeba castellanii str. Neff	14914103
ACA1_020150	CDS	ACA1_020150	NW_004457324.1	13477	18192	R	encoded by transcript ACA1_020150A; exocyst complex component 5, putative	complement(join(13477..13753,13856..13921,13999..14060,14188..14281,14380..14437,14532..14646,14764..14875,14975..15052,15138..15256,15357..15528,15712..15791,15889..15993,16091..16162,16279..16509,16805..16904,17090..17261,17364..17417,17493..17562,17679..17771,17855..17931,18006..18192))	Acanthamoeba castellanii str. Neff	14914100
ACA1_020160	CDS	ACA1_020160	NW_004457324.1	18449	22050	R	encoded by transcript ACA1_020160A; uncharacterized protein	complement(join(18449..18541,18625..18878,18946..19362,19460..19684,19754..19922,19987..20052,20127..20307,20393..20640,20683..20817,20908..21284,21360..21537,21732..21785,21886..>22050))	Acanthamoeba castellanii str. Neff	14914105
ACA1_237760	CDS	ACA1_237760	NW_004457323.1	8111	9452	D	encoded by transcript ACA1_237760A; homeobox domain containing protein	join(8111..8425,8497..8577,8664..9267,9331..9452)	Acanthamoeba castellanii str. Neff	14914011
ACA1_237770	CDS	ACA1_237770	NW_004457323.1	9750	12489	D	encoded by transcript ACA1_237770A; uncharacterized protein	join(9750..9916,10113..10256,10372..10499,10563..10603,10705..10771,11220..11260,11362..11428,11512..11606,11758..11940,12057..12266,12388..12489)	Acanthamoeba castellanii str. Neff	14913934
ACA1_237780	CDS	ACA1_237780	NW_004457323.1	12567	13153	D	encoded by transcript ACA1_237780A; uncharacterized protein	join(12567..12678,12766..12887,13007..13153)	Acanthamoeba castellanii str. Neff	14913926
ACA1_237790	CDS	ACA1_237790	NW_004457323.1	13496	18957	D	encoded by transcript ACA1_237790A; protein kinase domain containing protein	join(13496..13636,13757..13788,13880..13947,14104..14287,14362..14569,14602..14934,14969..15008,15181..15275,15478..15582,15754..16091,16254..16429,16613..16866,17027..17151,17301..17472,17672..17865,18051..18307,18443..18597,18761..18904,18931..18957)	Acanthamoeba castellanii str. Neff	14913868
ACA1_237800	CDS	ACA1_237800	NW_004457323.1	19096	20071	D	encoded by transcript ACA1_237800A; WD domain, G-beta repeat-containing protein	join(19096..19473,19622..19695,19708..19783,19892..20071)	Acanthamoeba castellanii str. Neff	14913869
ACA1_237810	CDS	ACA1_237810	NW_004457323.1	20479	22424	R	encoded by transcript ACA1_237810A; uncharacterized protein	complement(join(20479..20507,20747..20822,20922..21205,21327..21450,21611..21904,22149..22424))	Acanthamoeba castellanii str. Neff	14913870
ACA1_237820	CDS	ACA1_237820	NW_004457323.1	22701	24803	R	encoded by transcript ACA1_237820A; uncharacterized protein	complement(join(22701..22881,22984..23120,23263..23377,23510..23604,23685..23740,23897..24036,24123..24262,24306..24359,24519..24803))	Acanthamoeba castellanii str. Neff	14913927
ACA1_237830	CDS	ACA1_237830	NW_004457323.1	25317	26652	D	encoded by transcript ACA1_237830A; F-box domain containing protein	join(25317..25357,25407..25891,26084..26652)	Acanthamoeba castellanii str. Neff	14913928
ACA1_237840	CDS	ACA1_237840	NW_004457323.1	26784	28888	R	encoded by transcript ACA1_237840A; uncharacterized protein	complement(join(26784..26986,27179..27251,27323..27490,27601..28550,28816..28888))	Acanthamoeba castellanii str. Neff	14913929
ACA1_237850	CDS	ACA1_237850	NW_004457323.1	29094	32088	D	encoded by transcript ACA1_237850A; BTB/POZ domain containing protein	join(29094..29461,29804..29903,30036..30256,30572..30617,30796..31009,31179..31410,31561..31919,32057..32088)	Acanthamoeba castellanii str. Neff	14913930
ACA1_237860	CDS	ACA1_237860	NW_004457323.1	32307	35834	D	encoded by transcript ACA1_237860A; glycerophosphodiester phosphodiesterase family protein	join(32307..32780,32878..32994,33095..33222,33359..33441,33567..33662,33821..33904,34104..34198,34291..34391,34511..34725,34933..35084,35405..35485,35575..35651,35681..35834)	Acanthamoeba castellanii str. Neff	14913931
ACA1_237870	CDS	ACA1_237870	NW_004457323.1	36023	37928	D	encoded by transcript ACA1_237870A; sterol 24C-methyltransferase	join(36023..36305,36454..36569,36707..36869,36977..37080,37197..37297,37438..37519,37645..37750,37843..37928)	Acanthamoeba castellanii str. Neff	14913932
ACA1_237880	CDS	ACA1_237880	NW_004457323.1	38126	39165	R	encoded by transcript ACA1_237880A; leucine zipper and CTNNBIP1 domain containing, putative	complement(join(38126..38193,38274..38355,38480..38569,38638..38778,38929..39165))	Acanthamoeba castellanii str. Neff	14913933
ACA1_237890	CDS	ACA1_237890	NW_004457323.1	39318	40478	D	encoded by transcript ACA1_237890A; SCP2 sterol transfer family protein	join(39318..39540,39620..39673,39764..39889,39956..40057,40116..40188,40269..40336,40411..40478)	Acanthamoeba castellanii str. Neff	14913994
ACA1_237900	CDS	ACA1_237900	NW_004457323.1	50095	50522	R	encoded by transcript ACA1_237900A; uncharacterized protein	complement(join(50095..50150,50289..50413,50497..50522))	Acanthamoeba castellanii str. Neff	14913995
ACA1_238110	CDS	ACA1_238110	NW_004457323.1	55053	55848	R	encoded by transcript ACA1_238110A; uncharacterized protein	complement(join(55053..55211,55325..55413,55522..55615,55723..>55848))	Acanthamoeba castellanii str. Neff	14913996
ACA1_238120	CDS	ACA1_238120	NW_004457323.1	56550	58190	R	encoded by transcript ACA1_238120A; RFX DNAbinding domain containing protein	complement(join(56550..57616,57776..57840,57952..58190))	Acanthamoeba castellanii str. Neff	14913997
ACA1_238130	CDS	ACA1_238130	NW_004457323.1	58696	59820	R	encoded by transcript ACA1_238130A; RapGAP/RanGAP domain containing protein	complement(join(58696..58899,59001..59119,59268..59411,59484..59609,59724..59820))	Acanthamoeba castellanii str. Neff	14913998
ACA1_238140	CDS	ACA1_238140	NW_004457323.1	59929	62203	R	encoded by transcript ACA1_238140A; uncharacterized protein	complement(join(59929..60054,60088..60206,60376..60520,60599..60665,60802..61321,61393..61465,61692..61748,61970..62203))	Acanthamoeba castellanii str. Neff	14913999
ACA1_238250	CDS	ACA1_238250	NW_004457323.1	63478	66899	D	encoded by transcript ACA1_238250A; acylCoA dehydrogenase, middle domain containing protein	join(63478..63571,63721..63851,63992..64106,64287..64322,64514..64706,64786..64981,65156..65265,65419..65666,65778..65944,66015..66192,66416..66565,66709..66899)	Acanthamoeba castellanii str. Neff	14914000
ACA1_238270	CDS	ACA1_238270	NW_004457323.1	74120	77827	D	encoded by transcript ACA1_238270A; RasGEF domain containing protein	join(74120..75521,75623..75835,75944..76184,76286..77060,77207..77827)	Acanthamoeba castellanii str. Neff	14913935
ACA1_238280	CDS	ACA1_238280	NW_004457323.1	78204	80608	R	encoded by transcript ACA1_238280A; WD40 repeat-containing protein	complement(join(78204..78210,78289..78509,78662..78920,79043..79308,79455..79689,79793..79890,80211..80324,80423..80608))	Acanthamoeba castellanii str. Neff	14913936
ACA1_238390	CDS	ACA1_238390	NW_004457323.1	81102	83974	R	encoded by transcript ACA1_238390A; coronin, putative	complement(join(81102..81212,81341..81429,81530..81599,81749..81863,81967..82034,82160..82261,82399..82445,82573..82679,82792..82863,82976..83066,83195..83276,83399..83508,83683..83714,83807..83876,83956..83974))	Acanthamoeba castellanii str. Neff	14913937
ACA1_238400	CDS	ACA1_238400	NW_004457323.1	84250	85683	D	encoded by transcript ACA1_238400A; uncharacterized protein	join(84250..84302,84405..84584,84696..84803,84891..85034,85176..85683)	Acanthamoeba castellanii str. Neff	14913938
ACA1_238410	CDS	ACA1_238410	NW_004457323.1	85979	87430	D	encoded by transcript ACA1_238410A; uncharacterized protein	join(85979..86204,86259..86416,86518..86632,86744..86806,86876..86954,87062..87161,87263..87430)	Acanthamoeba castellanii str. Neff	14913939
ACA1_238420	CDS	ACA1_238420	NW_004457323.1	87541	93616	R	encoded by transcript ACA1_238420A; PH domain containing protein	complement(join(87541..87641,87744..88353,88480..88596,88782..88976,89150..89212,89361..89533,89628..89722,89839..90053,90149..90283,90401..90493,90591..90681,90773..90899,90989..91050,91177..91307,91382..91490,91576..91670,91763..91888,91981..92064,92174..92237,92328..92428,92557..92637,92766..92930,93078..93300,93486..93616))	Acanthamoeba castellanii str. Neff	14913940
ACA1_238430	CDS	ACA1_238430	NW_004457323.1	93855	94970	D	encoded by transcript ACA1_238430A; uracilDNA glycosylase, putative	join(<93855..93968,94054..94162,94242..94432,94537..94647,94734..94970)	Acanthamoeba castellanii str. Neff	14913941
ACA1_238440	CDS	ACA1_238440	NW_004457323.1	95012	95548	D	encoded by transcript ACA1_238440A; UracilDNA glycosylase	join(95012..95115,95213..95336,95453..95548)	Acanthamoeba castellanii str. Neff	14913942
ACA1_238450	CDS	ACA1_238450	NW_004457323.1	95689	96983	R	encoded by transcript ACA1_238450A; nuclear receptor coactivator, putative	complement(join(95689..95743,95893..95952,96025..96110,96378..96471,96565..96620,96688..96784,96910..96983))	Acanthamoeba castellanii str. Neff	14913943
ACA1_238470	CDS	ACA1_238470	NW_004457323.1	99226	100086	R	encoded by transcript ACA1_238470A; uncharacterized protein	complement(join(99226..99290,99415..99572,99686..99735,99805..99949,100028..100086))	Acanthamoeba castellanii str. Neff	14913962
ACA1_238580	CDS	ACA1_238580	NW_004457323.1	102005	102512	R	encoded by transcript ACA1_238580A; serine/threonine protein kinase	complement(join(102005..102285,102356..102512))	Acanthamoeba castellanii str. Neff	14913963
ACA1_238590	CDS	ACA1_238590	NW_004457323.1	102813	103841	D	encoded by transcript ACA1_238590A; CBS domain containing protein	join(102813..103046,103116..103376,103484..103561,103659..103841)	Acanthamoeba castellanii str. Neff	14913964
ACA1_238600	CDS	ACA1_238600	NW_004457323.1	103941	106163	D	encoded by transcript ACA1_238600A; glutaminylpeptide cyclotransferase, putative	join(103941..104048,104181..104367,104460..104554,104666..104774,104899..105024,105141..105209,105288..105345,105511..105627,105761..105825,105917..105987,106119..>106163)	Acanthamoeba castellanii str. Neff	14913965
ACA1_238610	CDS	ACA1_238610	NW_004457323.1	106242	108296	R	encoded by transcript ACA1_238610A; uncharacterized protein	complement(join(106242..106489,106588..106760,106850..106965,107097..107538,107703..107821,107937..108036,108196..108296))	Acanthamoeba castellanii str. Neff	14913966
ACA1_238620	CDS	ACA1_238620	NW_004457323.1	108450	108900	D	encoded by transcript ACA1_238620A; uncharacterized protein	join(108450..108471,108548..108900)	Acanthamoeba castellanii str. Neff	14913967
ACA1_238630	CDS	ACA1_238630	NW_004457323.1	109020	110364	R	encoded by transcript ACA1_238630A; phosphogluconate dehydrogenase (decarboxylating), NAD binding domain containing protein	complement(join(109020..109138,109213..109260,109347..109469,109559..109742,109808..110084,110168..110261,110334..110364))	Acanthamoeba castellanii str. Neff	14913968
ACA1_238740	CDS	ACA1_238740	NW_004457323.1	111702	113839	D	encoded by transcript ACA1_238740A; cytochrome b-like heme/steroid binding domain containing protein	join(111702..111986,112248..112349,112448..112621,112737..112805,112893..113000,113087..113141,113251..113279,113322..113393,113479..113605,113697..113839)	Acanthamoeba castellanii str. Neff	14913969
ACA1_238850	CDS	ACA1_238850	NW_004457323.1	114645	115456	D	encoded by transcript ACA1_238850A; uncharacterized protein	join(114645..114653,114725..114781,114801..114816,114966..115146,115230..115314,115373..115456)	Acanthamoeba castellanii str. Neff	14913970
ACA1_238860	CDS	ACA1_238860	NW_004457323.1	115899	117558	D	encoded by transcript ACA1_238860A; monad, putative	join(115899..116352,116439..116561,116677..116804,116936..117128,117237..117361,117481..117558)	Acanthamoeba castellanii str. Neff	14913971
ACA1_238870	CDS	ACA1_238870	NW_004457323.1	117638	120187	R	encoded by transcript ACA1_238870A; uncharacterized protein	complement(117638..120187)	Acanthamoeba castellanii str. Neff	14913907
ACA1_238880	CDS	ACA1_238880	NW_004457323.1	120663	124344	R	encoded by transcript ACA1_238880A; RhoGEF domain containing protein	complement(join(120663..122862,123002..123192,123325..123423,123435..123730,123940..124078,124228..124344))	Acanthamoeba castellanii str. Neff	14913908
ACA1_239090	CDS	ACA1_239090	NW_004457323.1	129482	130570	D	encoded by transcript ACA1_239090A; hemerythrin hhe cation binding subfamily protein	join(129482..129598,129729..129897,129961..130053,130133..130374,130493..130570)	Acanthamoeba castellanii str. Neff	14913909
ACA1_239200	CDS	ACA1_239200	NW_004457323.1	132392	135261	D	encoded by transcript ACA1_239200A; MYND finger domain containing protein	join(132392..132444,132530..132675,132794..132833,133145..133198,133292..133351,133463..133599,133729..133866,134057..134108,134178..134284,134374..134490,134571..134739,134859..135054,135088..135261)	Acanthamoeba castellanii str. Neff	14913910
ACA1_239210	CDS	ACA1_239210	NW_004457323.1	135353	138082	R	encoded by transcript ACA1_239210A; RhoGEF domain containing protein	complement(join(135353..135382,135475..135596,135664..135796,135894..135976,136055..136223,136345..136478,136564..136657,136734..136840,137064..137222,137331..137478,137579..137691,137787..137855,137986..138082))	Acanthamoeba castellanii str. Neff	14913911
ACA1_239220	CDS	ACA1_239220	NW_004457323.1	138555	140215	R	encoded by transcript ACA1_239220A; ApaG, putative	complement(join(138555..138585,138692..138774,138904..138990,139092..139205,139340..139435,139515..139649,139756..139841,139938..139999,140103..140215))	Acanthamoeba castellanii str. Neff	14913912
ACA1_239230	CDS	ACA1_239230	NW_004457323.1	140566	141719	D	encoded by transcript ACA1_239230A; small copii coat gtpase sar1, putative	join(140566..140611,140701..140820,140926..141027,141128..141260,141448..141553,141639..141719)	Acanthamoeba castellanii str. Neff	14913913
ACA1_239240	CDS	ACA1_239240	NW_004457323.1	142381	148293	D	encoded by transcript ACA1_239240A; RhoGEF domain containing protein	join(142381..143973,144161..145487,145583..145684,145862..146008,146093..146470,146567..146777,146861..146953,147027..147131,147211..147302,147389..147784,147873..147947,148074..148196,148286..148293)	Acanthamoeba castellanii str. Neff	14913914
ACA1_239260	CDS	ACA1_239260	NW_004457323.1	149969	150619	D	encoded by transcript ACA1_239260A; eukaryotic translation initiation factor 2 alpha subunit, putative	149969..150619	Acanthamoeba castellanii str. Neff	14914012
ACA1_239270	CDS	ACA1_239270	NW_004457323.1	150845	151534	R	encoded by transcript ACA1_239270A; polyubiquitin, putative	complement(join(150845..151072,151100..151534))	Acanthamoeba castellanii str. Neff	14914013
ACA1_239280	CDS	ACA1_239280	NW_004457323.1	151834	153157	R	encoded by transcript ACA1_239280A; uncharacterized protein	complement(join(151834..151909,152101..152175,152630..152730,152852..152910,153020..153099,153135..153157))	Acanthamoeba castellanii str. Neff	14914014
ACA1_239390	CDS	ACA1_239390	NW_004457323.1	153957	154630	D	encoded by transcript ACA1_239390A; uncharacterized protein	join(153957..154352,154625..154630)	Acanthamoeba castellanii str. Neff	14914015
ACA1_239500	CDS	ACA1_239500	NW_004457323.1	155419	155634	R	encoded by transcript ACA1_239500A; copper chaperone, putative	complement(155419..155634)	Acanthamoeba castellanii str. Neff	14914016
ACA1_239510	CDS	ACA1_239510	NW_004457323.1	155871	156680	D	encoded by transcript ACA1_239510A; ribonuclease p protein subunit p14, putative	join(155871..155950,156031..156134,156222..156300,156400..156469,156564..156680)	Acanthamoeba castellanii str. Neff	14914017
ACA1_239520	CDS	ACA1_239520	NW_004457323.1	157478	160992	R	encoded by transcript ACA1_239520A; TBC domain containing protein	complement(join(157478..157669,157728..157821,157937..158310,158386..158682,158719..158945,159049..159191,159286..159504,159601..159801,159906..160009,160146..160265,160384..160992))	Acanthamoeba castellanii str. Neff	14914018
ACA1_239540	CDS	ACA1_239540	NW_004457323.1	164471	165418	D	encoded by transcript ACA1_239540A; uncharacterized protein	join(164471..164594,164787..164845,164888..164980,165020..165418)	Acanthamoeba castellanii str. Neff	14914020
ACA1_239550	CDS	ACA1_239550	NW_004457323.1	165606	166797	R	encoded by transcript ACA1_239550A; cytidine and deoxycytidylate deaminase zincbinding region subfamily protein	complement(join(165606..165718,165829..165990,166092..166797))	Acanthamoeba castellanii str. Neff	14914021
ACA1_239560	CDS	ACA1_239560	NW_004457323.1	167798	170657	R	encoded by transcript ACA1_239560A; uncharacterized protein	complement(join(167798..167932,168038..168163,168331..168453,168556..168732,168814..168941,169021..169126,169225..169305,169466..169606,169705..170010,170113..170336,170450..170657))	Acanthamoeba castellanii str. Neff	14914022
ACA1_239570	CDS	ACA1_239570	NW_004457323.1	170915	171855	R	encoded by transcript ACA1_239570A; clathrin assembly protein AP19, small subunit	complement(join(170915..171004,171132..171179,171250..171330,171415..171478,171553..171659,171802..171855))	Acanthamoeba castellanii str. Neff	14914023
ACA1_239680	CDS	ACA1_239680	NW_004457323.1	173034	175505	D	encoded by transcript ACA1_239680A; tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)binding domain containing protein	join(173034..173223,173316..173381,173460..173674,173811..173959,174070..174234,174304..174427,174692..174779,174875..174981,175065..175134,175221..175334,175420..175505)	Acanthamoeba castellanii str. Neff	14914024
ACA1_239790	CDS	ACA1_239790	NW_004457323.1	175617	177107	R	encoded by transcript ACA1_239790A; stationaryphase survival protein SurE, putative	complement(join(175617..175775,175860..175985,176104..176186,176479..176607,176684..176918,177021..177107))	Acanthamoeba castellanii str. Neff	14914079
ACA1_239800	CDS	ACA1_239800	NW_004457323.1	177287	178967	R	encoded by transcript ACA1_239800A; uncharacterized protein	complement(join(177287..177420,177541..177655,177809..177877,177978..178051,178129..178186,178306..178491,178605..178812,178966..178967))	Acanthamoeba castellanii str. Neff	14914080
ACA1_239910	CDS	ACA1_239910	NW_004457323.1	179504	181092	R	encoded by transcript ACA1_239910A; erythronate4-phosphate dehydrogenase domain containing protein	complement(join(179504..179694,179808..179960,180046..180172,180296..180350,180465..180575,180685..180773,180860..180943,181012..181092))	Acanthamoeba castellanii str. Neff	14914081
ACA1_239920	CDS	ACA1_239920	NW_004457323.1	182848	183262	D	encoded by transcript ACA1_239920A; uncharacterized protein	join(182848..182980,183058..183169,183256..183262)	Acanthamoeba castellanii str. Neff	14914082
ACA1_239930	CDS	ACA1_239930	NW_004457323.1	184682	186773	R	encoded by transcript ACA1_239930A; Ankyrin repeatcontaining protein	complement(join(184682..184887,185001..185210,185281..185405,185591..185709,185789..185947,186232..186519,186597..186773))	Acanthamoeba castellanii str. Neff	14914083
ACA1_239940	CDS	ACA1_239940	NW_004457323.1	186875	187321	D	encoded by transcript ACA1_239940A; dolichylphosphate mannosyltransferase polypeptide 2, putative	join(186875..186976,187063..187127,187192..187321)	Acanthamoeba castellanii str. Neff	14914084
ACA1_239950	CDS	ACA1_239950	NW_004457323.1	187543	187990	D	encoded by transcript ACA1_239950A; uncharacterized protein	join(187543..187600,187693..187849,187948..187990)	Acanthamoeba castellanii str. Neff	14914085
ACA1_240060	CDS	ACA1_240060	NW_004457323.1	191394	191990	R	encoded by transcript ACA1_240060A; carboxylesterase, type B, putative	complement(join(191394..191490,191565..191650,191732..191820,191900..191990))	Acanthamoeba castellanii str. Neff	14914086
ACA1_240070	CDS	ACA1_240070	NW_004457323.1	193889	196640	R	encoded by transcript ACA1_240070A; carboxylesterase superfamily protein	complement(join(193889..194178,194252..194446,194557..194641,194689..194838,194959..195088,195183..195275,195378..195582,195663..195782,195880..195942,196059..196147,196226..196311,196390..196478,196550..196640))	Acanthamoeba castellanii str. Neff	14914087
ACA1_240180	CDS	ACA1_240180	NW_004457323.1	200900	203471	D	encoded by transcript ACA1_240180A; WD domain, Gbeta repeat-containing protein	join(<200900..201000,201144..201250,201330..201431,201492..201601,201751..201948,202068..202206,202305..202465,202950..203096,203203..203314,203413..203471)	Acanthamoeba castellanii str. Neff	14914088
ACA1_240290	CDS	ACA1_240290	NW_004457323.1	203604	206190	D	encoded by transcript ACA1_240290A; NOL1/NOP2/sun family domain containing protein	join(203604..203691,203769..204025,204234..204323,204411..204438,204526..204656,204755..204802,204875..204983,205088..205198,205310..205416,205495..205570,205716..205862,205973..206190)	Acanthamoeba castellanii str. Neff	14913944
ACA1_240300	CDS	ACA1_240300	NW_004457323.1	206431	207139	D	encoded by transcript ACA1_240300A; uncharacterized protein	join(206431..206825,206923..207139)	Acanthamoeba castellanii str. Neff	14913945
ACA1_240310	CDS	ACA1_240310	NW_004457323.1	207217	208138	R	encoded by transcript ACA1_240310A; methyltransferase domain containing protein	complement(join(207217..207646,207738..208138))	Acanthamoeba castellanii str. Neff	14913946
ACA1_240320	CDS	ACA1_240320	NW_004457323.1	208806	209961	R	encoded by transcript ACA1_240320A; mob1/phocein family protein	complement(join(208806..208942,209040..209111,209216..209330,209444..209654,209915..209961))	Acanthamoeba castellanii str. Neff	14913947
ACA1_240330	CDS	ACA1_240330	NW_004457323.1	210126	212762	D	encoded by transcript ACA1_240330A; Ceruloplasmin precursor (Ferroxidase), putative	join(210126..210145,210274..210371,210499..210606,210731..210815,210928..211018,211146..211269,211339..211414,211539..211626,211740..211831,211944..212005,212123..212239,212319..212367,212498..212606,212709..212762)	Acanthamoeba castellanii str. Neff	14913948
ACA1_240340	CDS	ACA1_240340	NW_004457323.1	213013	214908	R	encoded by transcript ACA1_240340A; ribosomal RNA large subunit methyltransferase J, putative	complement(join(213013..213160,213280..213433,213571..213677,213768..213920,214041..214201,214270..214620,214708..214908))	Acanthamoeba castellanii str. Neff	14913949
ACA1_240350	CDS	ACA1_240350	NW_004457323.1	215075	223958	D	encoded by transcript ACA1_240350A; nuclear pore complexassociated protein TPR, putative	join(215075..215480,215609..215779,215853..215956,216046..216159,216274..216381,216473..216632,216731..216852,216935..217009,217110..217238,217381..217667,217764..218061,218101..218235,218321..218409,218479..218581,218666..218949,219056..219122,219218..219355,219433..219540,219617..219688,219781..220053,220128..220211,220289..220372,220435..220509,220604..220681,220718..220812,220898..220972,221059..221154,221187..221312,221376..221441,221532..221598,221720..221836,221920..222083,222188..222391,222485..222808,222884..223958)	Acanthamoeba castellanii str. Neff	14913950
ACA1_240360	CDS	ACA1_240360	NW_004457323.1	225891	227438	D	encoded by transcript ACA1_240360A; uncharacterized protein	join(225891..226286,226426..227124,227205..227438)	Acanthamoeba castellanii str. Neff	14913951
ACA1_240370	CDS	ACA1_240370	NW_004457323.1	227699	228077	R	encoded by transcript ACA1_240370A; uncharacterized protein	complement(join(227699..227846,227977..228077))	Acanthamoeba castellanii str. Neff	14914002
ACA1_240380	CDS	ACA1_240380	NW_004457323.1	228096	229063	R	encoded by transcript ACA1_240380A; uncharacterized protein	complement(join(228096..228236,228313..228672,228802..228899,228973..229063))	Acanthamoeba castellanii str. Neff	14914003
ACA1_240390	CDS	ACA1_240390	NW_004457323.1	230021	232431	D	encoded by transcript ACA1_240390A; acylCoA dehydrogenase domain containing protein	join(230021..230093,230180..230233,230353..230450,230522..230623,230750..230924,231024..231152,231275..231401,231560..231672,231788..232011,232089..232240,232374..232431)	Acanthamoeba castellanii str. Neff	14914004
ACA1_240500	CDS	ACA1_240500	NW_004457323.1	233422	239383	D	encoded by transcript ACA1_240500A; uncharacterized protein	join(233422..233598,233726..234005,234225..234340,234547..234697,234729..234857,234948..235048,235138..235195,235214..235294,235380..235553,235632..235778,236097..236276,236369..236412,236953..237010,237029..237109,237197..237367,237449..237595,237788..237846,238940..239383)	Acanthamoeba castellanii str. Neff	14914005
ACA1_240710	CDS	ACA1_240710	NW_004457323.1	239549	239764	R	encoded by transcript ACA1_240710A; uncharacterized protein	complement(239549..239764)	Acanthamoeba castellanii str. Neff	14914006
ACA1_240820	CDS	ACA1_240820	NW_004457323.1	240570	241250	D	encoded by transcript ACA1_240820A; uncharacterized protein	<240570..241250	Acanthamoeba castellanii str. Neff	14914007
ACA1_240830	CDS	ACA1_240830	NW_004457323.1	241878	244351	R	encoded by transcript ACA1_240830A; elongation factor Tu domain 2/elongation factor G Cterminus domain containing protein	complement(join(241878..242369,242380..242386,242507..242919,243023..243241,243316..243461,243556..243685,243769..244003,244073..244189,244287..244351))	Acanthamoeba castellanii str. Neff	14914008
ACA1_241040	CDS	ACA1_241040	NW_004457323.1	244562	245135	R	encoded by transcript ACA1_241040A; elongation factor 2, putative	complement(join(244562..244598,244630..244960,245063..245135))	Acanthamoeba castellanii str. Neff	14914009
ACA1_241150	CDS	ACA1_241150	NW_004457323.1	246426	248213	R	encoded by transcript ACA1_241150A; zinc-finger dna-binding family protein	complement(join(246426..246611,246678..246906,246963..247495,247661..247799,247879..248000,248085..248213))	Acanthamoeba castellanii str. Neff	14914010
ACA1_241260	CDS	ACA1_241260	NW_004457323.1	248345	250152	R	encoded by transcript ACA1_241260A; cytochrome p450 superfamily protein	complement(join(248345..248436,248538..248608,248714..248862,248961..249047,249105..249278,249351..249625,249707..249762,249842..249960,250030..>250152))	Acanthamoeba castellanii str. Neff	14913884
ACA1_241370	CDS	ACA1_241370	NW_004457323.1	251663	253722	D	encoded by transcript ACA1_241370A; uncharacterized protein	join(251663..251688,251759..251834,251893..251991,252054..252336,252402..252500,252563..252708,252877..253036,253102..253200,253265..253410,253477..253722)	Acanthamoeba castellanii str. Neff	14913885
ACA1_241490	CDS	ACA1_241490	NW_004457323.1	257847	258353	D	encoded by transcript ACA1_241490A; uncharacterized protein	join(257847..257865,257988..258324,258338..258353)	Acanthamoeba castellanii str. Neff	14913887
ACA1_241600	CDS	ACA1_241600	NW_004457323.1	262486	262980	D	encoded by transcript ACA1_241600A; uncharacterized protein	join(262486..262863,262921..262980)	Acanthamoeba castellanii str. Neff	14913888
ACA1_241610	CDS	ACA1_241610	NW_004457323.1	263276	264756	D	encoded by transcript ACA1_241610A; kinesin motor domain containing protein	join(263276..263328,263421..263643,263804..263911,264097..264181,264287..264756)	Acanthamoeba castellanii str. Neff	14913889
ACA1_241720	CDS	ACA1_241720	NW_004457323.1	265230	267218	R	encoded by transcript ACA1_241720A; ROK family protein	complement(join(265230..265345,265360..265371,265475..265550,265626..265741,265828..265880,266011..266088,266165..266266,266425..266483,266600..266684,266779..266873,266948..267050,267169..267218))	Acanthamoeba castellanii str. Neff	14913890
ACA1_241830	CDS	ACA1_241830	NW_004457323.1	268475	271625	D	encoded by transcript ACA1_241830A; MOSC beta barrel domain containing protein	join(268475..268656,268753..268874,268982..269051,269113..269160,269517..269700,269771..269872,269970..270063,270177..270304,270386..270455,270543..270603,270624..270656,270762..270840,270930..271185,271218..271274,271300..271625)	Acanthamoeba castellanii str. Neff	14913891
ACA1_242040	CDS	ACA1_242040	NW_004457323.1	271779	272027	R	encoded by transcript ACA1_242040A; uncharacterized protein	complement(<271779..272027)	Acanthamoeba castellanii str. Neff	14913892
ACA1_242050	CDS	ACA1_242050	NW_004457323.1	272702	273600	R	encoded by transcript ACA1_242050A; zetacop, subunit of COP-I complex, putative	complement(join(272702..272873,272896..273030,273107..273222,273300..273331,273413..273563,273574..273600))	Acanthamoeba castellanii str. Neff	14913893
ACA1_242060	CDS	ACA1_242060	NW_004457323.1	274061	275603	D	encoded by transcript ACA1_242060A; methyltransferase, YaeB/AF_0241 family, putative	join(274061..274151,274325..274451,274526..274666,274904..275013,275148..275282,275362..275450,275561..>275603)	Acanthamoeba castellanii str. Neff	14913894
ACA1_242170	CDS	ACA1_242170	NW_004457323.1	275790	276200	D	encoded by transcript ACA1_242170A; uncharacterized protein	<275790..276200	Acanthamoeba castellanii str. Neff	14914037
ACA1_242180	CDS	ACA1_242180	NW_004457323.1	279851	282558	R	encoded by transcript ACA1_242180A; WW domain containing protein	complement(join(279851..279877,280305..280766,281192..281298,281374..281430,281547..281609,281693..281854,281979..282085,282161..282268,282542..282558))	Acanthamoeba castellanii str. Neff	14914038
ACA1_242390	CDS	ACA1_242390	NW_004457323.1	283527	292430	D	encoded by transcript ACA1_242390A; SacI domain containing protein	join(283527..283569,283664..283763,284159..284251,284369..284482,284729..284814,284906..285048,285332..285411,285517..285592,285677..285852,285935..286015,287241..287367,287457..287519,287701..287828,287890..288005,288101..288234,288409..288621,288729..288838,288969..289051,289171..289261,289377..289464,289644..289869,289961..290007,290150..290218,290308..290403,290516..290596,290702..290926,291080..291829,291939..292430)	Acanthamoeba castellanii str. Neff	14914039
ACA1_242500	CDS	ACA1_242500	NW_004457323.1	292886	302093	D	encoded by transcript ACA1_242500A; calponin domain containing protein	join(292886..293035,293124..293197,293281..293398,293484..293553,293666..293767,293849..293951,294025..294165,294252..294399,294515..295904,295977..296561,296628..296765,296969..297134,297208..297348,298108..298247,298324..298829,301703..301876,301938..302093)	Acanthamoeba castellanii str. Neff	14914040
ACA1_242810	CDS	ACA1_242810	NW_004457323.1	302672	303130	R	encoded by transcript ACA1_242810A; integrase	complement(join(302672..302998,303062..303130))	Acanthamoeba castellanii str. Neff	14914041
ACA1_243140	CDS	ACA1_243140	NW_004457323.1	317654	319139	D	encoded by transcript ACA1_243140A; uncharacterized protein	join(317654..317780,318601..318884,318940..318986,319101..>319139)	Acanthamoeba castellanii str. Neff	14914044
ACA1_243150	CDS	ACA1_243150	NW_004457323.1	320421	321496	D	encoded by transcript ACA1_243150A; uncharacterized protein	join(320421..320822,321136..321228,321281..321496)	Acanthamoeba castellanii str. Neff	14914045
ACA1_243160	CDS	ACA1_243160	NW_004457323.1	322209	325535	D	encoded by transcript ACA1_243160A; glycosyltransferase, group 2 domain containing protein	join(322209..322422,322480..322523,322688..322897,322974..323118,323193..323279,323363..323730,323814..323902,323968..324162,324224..324384,324443..324538,324599..324757,324825..324903,324976..325244,325306..325535)	Acanthamoeba castellanii str. Neff	14914046
ACA1_243170	CDS	ACA1_243170	NW_004457323.1	326122	327075	R	encoded by transcript ACA1_243170A; uncharacterized protein	complement(join(326122..326145,326166..326291,326477..326562,326678..326781,326978..327075))	Acanthamoeba castellanii str. Neff	14914056
ACA1_243280	CDS	ACA1_243280	NW_004457323.1	328725	329179	R	encoded by transcript ACA1_243280A; uncharacterized protein	complement(join(328725..328759,328864..329179))	Acanthamoeba castellanii str. Neff	14914057
ACA1_243390	CDS	ACA1_243390	NW_004457323.1	332198	332714	D	encoded by transcript ACA1_243390A; uncharacterized protein	join(332198..332228,332322..332441,332533..332714)	Acanthamoeba castellanii str. Neff	14914058
ACA1_243400	CDS	ACA1_243400	NW_004457323.1	333007	334455	D	encoded by transcript ACA1_243400A; uncharacterized protein	join(333007..333291,333384..333500,333580..333679,333796..334275,334355..334455)	Acanthamoeba castellanii str. Neff	14914059
ACA1_243410	CDS	ACA1_243410	NW_004457323.1	334918	335660	R	encoded by transcript ACA1_243410A; uncharacterized protein	complement(join(334918..335282,335415..335514,335622..335660))	Acanthamoeba castellanii str. Neff	14914060
ACA1_243420	CDS	ACA1_243420	NW_004457323.1	336343	338135	D	encoded by transcript ACA1_243420A; Ras subfamily protein	join(336343..336388,336499..336648,336870..336958,336970..336996,337087..337161,337294..337399,337499..337530,337635..337709,337842..337947,338047..338135)	Acanthamoeba castellanii str. Neff	14914061
ACA1_243430	CDS	ACA1_243430	NW_004457323.1	338827	340137	D	encoded by transcript ACA1_243430A; Fbox domain containing protein	338827..340137	Acanthamoeba castellanii str. Neff	14914062
ACA1_243440	CDS	ACA1_243440	NW_004457323.1	340557	342060	D	encoded by transcript ACA1_243440A; flavincontaining amine oxidasedehydrogenase, putative	join(340557..341550,341657..342060)	Acanthamoeba castellanii str. Neff	14914063
ACA1_243450	CDS	ACA1_243450	NW_004457323.1	342353	343074	D	encoded by transcript ACA1_243450A; uncharacterized protein	join(342353..342383,342569..342694,342809..342881,342981..343074)	Acanthamoeba castellanii str. Neff	14914064
ACA1_243560	CDS	ACA1_243560	NW_004457323.1	344022	346442	D	encoded by transcript ACA1_243560A; RhoGAP domain containing protein	join(344022..344171,344291..344363,344452..344535,344603..344675,344810..344853,344967..345046,345136..345237,345324..345468,345599..345779,345858..345936,346085..346167,346355..346442)	Acanthamoeba castellanii str. Neff	14914065
ACA1_243570	CDS	ACA1_243570	NW_004457323.1	347333	348558	D	encoded by transcript ACA1_243570A; uncharacterized protein	join(347333..347563,347912..347990,348104..348558)	Acanthamoeba castellanii str. Neff	14914066
ACA1_243580	CDS	ACA1_243580	NW_004457323.1	348941	349334	D	encoded by transcript ACA1_243580A; uncharacterized protein	join(348941..349038,349053..349148,349322..349334)	Acanthamoeba castellanii str. Neff	14913839
ACA1_243590	CDS	ACA1_243590	NW_004457323.1	350017	352023	D	encoded by transcript ACA1_243590A; uncharacterized protein	join(350017..350265,350341..350616,350702..350786,350904..350993,351054..351163,351246..351377,351459..351582,351661..351765,351842..352023)	Acanthamoeba castellanii str. Neff	14913840
ACA1_243600	CDS	ACA1_243600	NW_004457323.1	353058	353300	D	encoded by transcript ACA1_243600A; uncharacterized protein	353058..353300	Acanthamoeba castellanii str. Neff	14913841
ACA1_243610	CDS	ACA1_243610	NW_004457323.1	353725	354687	R	encoded by transcript ACA1_243610A; uncharacterized protein	complement(353725..354687)	Acanthamoeba castellanii str. Neff	14913842
ACA1_243620	CDS	ACA1_243620	NW_004457323.1	354991	356309	D	encoded by transcript ACA1_243620A; uncharacterized protein	join(354991..355153,355279..355430,355854..355971,356033..356158,356235..356277,356294..356309)	Acanthamoeba castellanii str. Neff	14913843
ACA1_243830	CDS	ACA1_243830	NW_004457323.1	357635	358134	R	encoded by transcript ACA1_243830A; uncharacterized protein	complement(join(357635..357646,357766..358134))	Acanthamoeba castellanii str. Neff	14913844
ACA1_243840	CDS	ACA1_243840	NW_004457323.1	358431	360312	D	encoded by transcript ACA1_243840A; peptide chain release factor 1, archaeal and eukaryotic forms subfamily protein	join(358431..358989,359000..359031,359134..360312)	Acanthamoeba castellanii str. Neff	14913845
ACA1_243850	CDS	ACA1_243850	NW_004457323.1	360615	365807	D	encoded by transcript ACA1_243850A; GTPase-activator protein for Ras family GTPase	join(360615..360729,360802..360846,360972..361061,361129..361267,361395..361546,361625..361801,361890..362110,362199..362555,362617..362810,362937..363141,363236..363575,363722..364113,364255..364332,364421..364706,364888..365287,365375..365494,365570..365807)	Acanthamoeba castellanii str. Neff	14913846
ACA1_244060	CDS	ACA1_244060	NW_004457323.1	366884	367196	D	encoded by transcript ACA1_244060A; uncharacterized protein	join(366884..367097,367165..367196)	Acanthamoeba castellanii str. Neff	14913847
ACA1_244070	CDS	ACA1_244070	NW_004457323.1	368410	370579	R	encoded by transcript ACA1_244070A; Ser/Thr phosphatase family superfamily protein	complement(join(368410..368785,368885..369016,369108..369206,369316..369509,369600..369691,369765..369867,369972..370045,370126..370217,370329..370579))	Acanthamoeba castellanii str. Neff	14913848
ACA1_244080	CDS	ACA1_244080	NW_004457323.1	370933	372454	D	encoded by transcript ACA1_244080A; PCI domain containing protein	join(370933..371001,371013..371038,371170..371339,371403..371800,371897..372178,372242..372454)	Acanthamoeba castellanii str. Neff	14913849
ACA1_244090	CDS	ACA1_244090	NW_004457323.1	372632	373806	R	encoded by transcript ACA1_244090A; uncharacterized protein	complement(join(372632..372720,372835..373010,373163..373483,373583..373667,373764..373806))	Acanthamoeba castellanii str. Neff	14913916
ACA1_244100	CDS	ACA1_244100	NW_004457323.1	374692	377955	D	encoded by transcript ACA1_244100A; papain family cysteine protease subfamily protein	join(374692..374739,374777..375875,376091..376179,376397..376541,376610..376650,376748..376897,377089..377211,377294..377387,377468..377584,377771..377955)	Acanthamoeba castellanii str. Neff	14913917
ACA1_244110	CDS	ACA1_244110	NW_004457323.1	378050	378301	D	encoded by transcript ACA1_244110A; cysteine protease	<378050..378301	Acanthamoeba castellanii str. Neff	14913918
ACA1_244120	CDS	ACA1_244120	NW_004457323.1	378685	380319	D	encoded by transcript ACA1_244120A; uncharacterized protein	join(378685..378714,378776..378922,378989..379101,379158..379346,379418..379739,379872..379944,380135..380319)	Acanthamoeba castellanii str. Neff	14913919
ACA1_244230	CDS	ACA1_244230	NW_004457323.1	380515	381961	D	encoded by transcript ACA1_244230A; cathepsin L, putative	join(380515..380733,380829..380963,381034..381113,381215..381356,381452..381668,381759..381961)	Acanthamoeba castellanii str. Neff	14913920
ACA1_244340	CDS	ACA1_244340	NW_004457323.1	383287	384018	D	encoded by transcript ACA1_244340A; uncharacterized protein	join(383287..383566,383681..383799,383872..384018)	Acanthamoeba castellanii str. Neff	14913921
ACA1_244350	CDS	ACA1_244350	NW_004457323.1	384121	385802	D	encoded by transcript ACA1_244350A; uncharacterized protein	join(384121..384196,384265..384401,384722..384850,384944..385152,385221..385305,385389..385802)	Acanthamoeba castellanii str. Neff	14913922
ACA1_244360	CDS	ACA1_244360	NW_004457323.1	385946	387774	R	encoded by transcript ACA1_244360A; cellulase (glycosyl hydrolase family 5) subfamily protein	complement(join(385946..386159,386237..387774))	Acanthamoeba castellanii str. Neff	14913923
ACA1_244370	CDS	ACA1_244370	NW_004457323.1	388386	389846	R	encoded by transcript ACA1_244370A; mitogen-activated protein kinase kinase kinase	complement(join(388386..388454,388520..388639,388748..388826,388931..388946,389091..389199,389334..>389846))	Acanthamoeba castellanii str. Neff	14913924
ACA1_244380	CDS	ACA1_244380	NW_004457323.1	390466	394611	D	encoded by transcript ACA1_244380A; P protein, putative	join(390466..391038,391260..391377,391455..391831,391923..392012,392133..392180,392295..392423,392561..392758,392890..393472,393605..393825,394022..394144,394213..394297,394381..394454,394528..394611)	Acanthamoeba castellanii str. Neff	14913925
ACA1_244390	CDS	ACA1_244390	NW_004457323.1	394858	395316	R	encoded by transcript ACA1_244390A; uncharacterized protein	complement(join(394858..395133,395152..395316))	Acanthamoeba castellanii str. Neff	14913859
ACA1_244400	CDS	ACA1_244400	NW_004457323.1	395965	396489	R	encoded by transcript ACA1_244400A; uncharacterized protein	complement(join(395965..396252,396472..396489))	Acanthamoeba castellanii str. Neff	14913860
ACA1_244410	CDS	ACA1_244410	NW_004457323.1	397068	397317	R	encoded by transcript ACA1_244410A; uncharacterized protein	complement(join(397068..397097,397132..397317))	Acanthamoeba castellanii str. Neff	14913861
ACA1_244520	CDS	ACA1_244520	NW_004457323.1	397838	398376	D	encoded by transcript ACA1_244520A; uncharacterized protein	join(397838..397890,397976..398049,398123..398376)	Acanthamoeba castellanii str. Neff	14913862
ACA1_244530	CDS	ACA1_244530	NW_004457323.1	399550	401922	R	encoded by transcript ACA1_244530A; uncharacterized protein	complement(join(399550..399766,399817..399863,400028..400337,400543..400623,400877..400958,401042..401129,401216..401259,401346..401395,401516..401579,401699..401760,401834..401922))	Acanthamoeba castellanii str. Neff	14913863
ACA1_244640	CDS	ACA1_244640	NW_004457323.1	402525	405672	R	encoded by transcript ACA1_244640A; type II CAX cation/proton exchanger, putative	complement(join(402525..402560,402831..403140,403265..403345,403450..403531,403609..403696,403783..403826,403913..403962,404033..404116,404201..404342,404479..404808,404820..404858,404944..405025,405104..405191,405266..405353,405429..405498,405595..405672))	Acanthamoeba castellanii str. Neff	14913864
ACA1_244750	CDS	ACA1_244750	NW_004457323.1	406325	408183	R	encoded by transcript ACA1_244750A; oxysterol binding protein	complement(join(406325..406538,406618..406793,406872..407046,407127..407279,407391..407699,407777..407840,407960..408021,408095..408183))	Acanthamoeba castellanii str. Neff	14913865
ACA1_244760	CDS	ACA1_244760	NW_004457323.1	409195	412745	R	encoded by transcript ACA1_244760A; P protein, putative	complement(join(409195..409278,409367..409552,409649..409817,409898..409989,410088..410198,410280..410578,410668..410797,410886..411167,411251..411555,411656..411741,411825..411957,412035..412101,412181..412458,412571..412745))	Acanthamoeba castellanii str. Neff	14913866
ACA1_244770	CDS	ACA1_244770	NW_004457323.1	413457	422198	R	encoded by transcript ACA1_244770A; SNF2 family Nterminal domain containing protein	complement(join(413457..414100,414194..414391,414498..414659,414769..415879,415969..416345,416437..416965,417057..417973,418098..418277,418377..418477,418547..419007,419089..419175,419286..419399,419574..419661,419791..419921,420007..420144,420245..420327,420409..420537,420629..420738,420853..420965,421046..421315,421451..421504,421588..421758,421790..421863,421958..422198))	Acanthamoeba castellanii str. Neff	14913867
ACA1_244780	CDS	ACA1_244780	NW_004457323.1	422482	423031	R	encoded by transcript ACA1_244780A; uncharacterized protein	complement(join(422482..422565,422621..423031))	Acanthamoeba castellanii str. Neff	14913850
ACA1_244790	CDS	ACA1_244790	NW_004457323.1	423318	425773	R	encoded by transcript ACA1_244790A; alcohol dehydrogenase GroESlike domain containing protein	complement(join(423318..423514,423852..423918,423987..424123,424198..424325,424405..424474,424562..424687,424798..424905,424983..425079,425258..425309,425376..425606,425673..425773))	Acanthamoeba castellanii str. Neff	14913851
ACA1_244800	CDS	ACA1_244800	NW_004457323.1	425932	426759	R	encoded by transcript ACA1_244800A; universal stress domain containing protein	complement(join(425932..426022,426105..426164,426233..426306,426390..426478,426573..426759))	Acanthamoeba castellanii str. Neff	14913852
ACA1_244810	CDS	ACA1_244810	NW_004457323.1	427052	428479	R	encoded by transcript ACA1_244810A; tRNA pseudouridine synthase	complement(join(427052..427225,427362..427419,427504..427580,427663..427704,427920..428041,428114..428179,428258..428336,428414..>428479))	Acanthamoeba castellanii str. Neff	14913853
ACA1_244820	CDS	ACA1_244820	NW_004457323.1	429130	432795	D	encoded by transcript ACA1_244820A; DEAD/DEAH box helicase domain containing protein	join(429130..429501,429600..429653,429732..429796,429891..430005,430121..430198,430295..430342,430369..430417,430500..430910,431032..431166,431281..431348,431450..431608,431675..431759,431853..432044,432152..432282,432388..432795)	Acanthamoeba castellanii str. Neff	14913854
ACA1_244830	CDS	ACA1_244830	NW_004457323.1	435834	436183	R	encoded by transcript ACA1_244830A; uncharacterized protein	complement(join(435834..435914,436001..436056,436123..436183))	Acanthamoeba castellanii str. Neff	14913855
ACA1_244840	CDS	ACA1_244840	NW_004457323.1	436777	437885	D	encoded by transcript ACA1_244840A; Hsp20/alpha crystallin superfamily protein	join(436777..437059,437154..437256,437330..437395,437486..437612,437682..437885)	Acanthamoeba castellanii str. Neff	14913856
ACA1_244850	CDS	ACA1_244850	NW_004457323.1	438033	440732	D	encoded by transcript ACA1_244850A; EF hand domain containing protein	join(438033..438135,438293..438379,438471..438630,438713..438795,438837..438946,439039..439114,439239..439316,439428..439588,439734..439848,439970..440057,440184..440281,440371..440505,440641..440732)	Acanthamoeba castellanii str. Neff	14913857
ACA1_244860	CDS	ACA1_244860	NW_004457323.1	440792	444806	R	encoded by transcript ACA1_244860A; uncharacterized protein	complement(join(440792..440815,440922..441601,441688..442014,442116..442316,442381..442524,442591..442897,442957..443210,443291..443409,443485..443791,443825..443879,443986..444212,444290..444806))	Acanthamoeba castellanii str. Neff	14913858
ACA1_244870	CDS	ACA1_244870	NW_004457323.1	445401	447369	D	encoded by transcript ACA1_244870A; DNA polymerase beta, putative	join(445401..445491,445568..445668,445741..445881,446061..446094,446203..446357,446482..446560,446660..446739,446805..446982,447092..447172,447263..447369)	Acanthamoeba castellanii str. Neff	14914089
ACA1_244880	CDS	ACA1_244880	NW_004457323.1	447530	448653	R	encoded by transcript ACA1_244880A; thioredoxin domain containing protein	complement(join(447530..447646,447778..447835,447902..448024,448110..448177,448252..448342,448478..448653))	Acanthamoeba castellanii str. Neff	14914090
ACA1_244890	CDS	ACA1_244890	NW_004457323.1	448736	452640	R	encoded by transcript ACA1_244890A; uncharacterized protein	complement(join(448736..448916,448985..449336,449439..449700,449771..449904,449982..450311,450372..450675,450751..450875,450948..451183,451260..451416,451483..451723,451793..452022,452101..452250,452358..452640))	Acanthamoeba castellanii str. Neff	14914091
ACA1_244900	CDS	ACA1_244900	NW_004457323.1	455501	456352	D	encoded by transcript ACA1_244900A; uncharacterized protein	join(455501..455960,456084..456240,456262..456352)	Acanthamoeba castellanii str. Neff	14914092
ACA1_244910	CDS	ACA1_244910	NW_004457323.1	456356	456899	D	encoded by transcript ACA1_244910A; uncharacterized protein	join(456356..456606,456670..456784,456855..456899)	Acanthamoeba castellanii str. Neff	14914093
ACA1_244920	CDS	ACA1_244920	NW_004457323.1	457831	458574	D	encoded by transcript ACA1_244920A; uncharacterized protein	join(457831..457886,457905..458574)	Acanthamoeba castellanii str. Neff	14914094
ACA1_244930	CDS	ACA1_244930	NW_004457323.1	458915	460858	D	encoded by transcript ACA1_244930A; uncharacterized protein	join(458915..459126,459207..459325,459400..459476,459601..459878,459963..460219,460315..460523,460613..460858)	Acanthamoeba castellanii str. Neff	14914095
ACA1_244950	CDS	ACA1_244950	NW_004457323.1	463211	464529	D	encoded by transcript ACA1_244950A; uncharacterized protein	join(463211..463406,463520..463612,463915..464058,464124..464251,464317..464439,464482..464529)	Acanthamoeba castellanii str. Neff	14914097
ACA1_245060	CDS	ACA1_245060	NW_004457323.1	464799	466486	D	encoded by transcript ACA1_245060A; prenyltransferase and squalene oxidase repeat domain containing protein	join(464799..465504,465585..465695,465828..466486)	Acanthamoeba castellanii str. Neff	14914098
ACA1_245070	CDS	ACA1_245070	NW_004457323.1	466564	468079	R	encoded by transcript ACA1_245070A; aminotransferase class IV, putative	complement(join(466564..466739,466829..466979,467093..467207,467313..467622,467725..467796,467965..468079))	Acanthamoeba castellanii str. Neff	14914025
ACA1_245080	CDS	ACA1_245080	NW_004457323.1	468861	469340	D	encoded by transcript ACA1_245080A; ubiquitinlike protein	join(468861..468962,469031..469195,469293..469340)	Acanthamoeba castellanii str. Neff	14914026
ACA1_245090	CDS	ACA1_245090	NW_004457323.1	469531	470202	R	encoded by transcript ACA1_245090A; heat shock protein HslVU, ATPase subunit HslU, putative	complement(469531..470202)	Acanthamoeba castellanii str. Neff	14914027
ACA1_245300	CDS	ACA1_245300	NW_004457323.1	471878	472468	D	encoded by transcript ACA1_245300A; uncharacterized protein	471878..472468	Acanthamoeba castellanii str. Neff	14914028
ACA1_245410	CDS	ACA1_245410	NW_004457323.1	473679	475190	D	encoded by transcript ACA1_245410A; GTPase-activator protein for Ras family GTPase	join(473679..474008,474091..474161,474284..474448,474552..474729,474817..474984,475062..475190)	Acanthamoeba castellanii str. Neff	14914029
ACA1_245420	CDS	ACA1_245420	NW_004457323.1	475694	477943	D	encoded by transcript ACA1_245420A; uncharacterized protein	join(475694..475853,475948..477710,477839..477943)	Acanthamoeba castellanii str. Neff	14914030
ACA1_245430	CDS	ACA1_245430	NW_004457323.1	478884	480829	R	encoded by transcript ACA1_245430A; alpha/beta hydrolase fold domain containing protein	complement(join(478884..479066,479148..479245,479361..479424,479516..479602,479914..479968,480058..480131,480221..480315,480384..480498,480577..480627,480707..480829))	Acanthamoeba castellanii str. Neff	14914031
ACA1_245440	CDS	ACA1_245440	NW_004457323.1	481308	482729	D	encoded by transcript ACA1_245440A; zinc finger in N-recognin protein	join(481308..481424,481570..481676,481766..481817,481895..481935,482037..482081,482189..482285,482384..482450,482557..482729)	Acanthamoeba castellanii str. Neff	14914032
ACA1_245460	CDS	ACA1_245460	NW_004457323.1	491774	493291	D	encoded by transcript ACA1_245460A; uncharacterized protein	join(491774..491866,492036..492056,492079..492173,492279..492366,492447..492685,492760..493291)	Acanthamoeba castellanii str. Neff	14914034
ACA1_245470	CDS	ACA1_245470	NW_004457323.1	493631	494082	D	encoded by transcript ACA1_245470A; 4F5 protein family	join(493631..493760,493848..493953,494010..494082)	Acanthamoeba castellanii str. Neff	14914035
ACA1_245480	CDS	ACA1_245480	NW_004457323.1	494119	494760	R	encoded by transcript ACA1_245480A; COX11, putative	complement(494119..494760)	Acanthamoeba castellanii str. Neff	14914036
ACA1_245490	CDS	ACA1_245490	NW_004457323.1	495390	495978	R	encoded by transcript ACA1_245490A; uncharacterized protein	complement(join(495390..495604,495771..495978))	Acanthamoeba castellanii str. Neff	14914067
ACA1_245500	CDS	ACA1_245500	NW_004457323.1	496382	497287	D	encoded by transcript ACA1_245500A; 2OG-Fe(II) oxygenase family oxidoreductase	join(496382..496605,496700..496838,496904..497056,497159..497287)	Acanthamoeba castellanii str. Neff	14914068
ACA1_245510	CDS	ACA1_245510	NW_004457323.1	498500	501291	D	encoded by transcript ACA1_245510A; SAM domain (Sterile alpha motif) domain containing protein	join(498500..498620,498737..498860,499096..499203,499284..499432,499542..499711,499779..500517,500606..501291)	Acanthamoeba castellanii str. Neff	14914069
ACA1_245520	CDS	ACA1_245520	NW_004457323.1	501811	501900	R	encoded by transcript ACA1_245520A; RNA recognition motif domain containing protein	complement(501811..501900)	Acanthamoeba castellanii str. Neff	14914070
ACA1_245630	CDS	ACA1_245630	NW_004457323.1	504130	507144	D	encoded by transcript ACA1_245630A; GTPase-activator protein for Ras family GTPase	join(504130..504250,504368..504405,504544..504605,504785..504892,504975..505123,505232..505401,505475..505678,505808..505924,506074..506180,506406..506457,506535..506575,506670..506714,506824..506920,507019..507144)	Acanthamoeba castellanii str. Neff	14914071
ACA1_245650	CDS	ACA1_245650	NW_004457323.1	513629	514924	R	encoded by transcript ACA1_245650A; carbohydrate binding domain cbm49 protein	complement(513629..514924)	Acanthamoeba castellanii str. Neff	14914073
ACA1_245660	CDS	ACA1_245660	NW_004457323.1	515442	517099	R	encoded by transcript ACA1_245660A; uncharacterized protein	complement(join(515442..515695,515808..516220,516274..516351,516490..516751,516847..517099))	Acanthamoeba castellanii str. Neff	14914074
ACA1_245670	CDS	ACA1_245670	NW_004457323.1	517383	518891	R	encoded by transcript ACA1_245670A; uncharacterized protein	complement(join(517383..517541,517650..517775,517821..517937,518041..518144,518241..518608,518806..518891))	Acanthamoeba castellanii str. Neff	14914075
ACA1_245680	CDS	ACA1_245680	NW_004457323.1	519649	520728	D	encoded by transcript ACA1_245680A; linker histone H1 and H5 domain containing protein	join(519649..520578,520660..520728)	Acanthamoeba castellanii str. Neff	14914076
ACA1_245690	CDS	ACA1_245690	NW_004457323.1	520922	521937	R	encoded by transcript ACA1_245690A; xanthine phosphoribosyltransferase	complement(join(520922..521035,521104..521198,521279..521360,521416..521510,521586..521649,521718..521789,521866..521937))	Acanthamoeba castellanii str. Neff	14914077
ACA1_245700	CDS	ACA1_245700	NW_004457323.1	522940	523773	D	encoded by transcript ACA1_245700A; protein kinase domain containing protein	join(522940..523218,523264..523773)	Acanthamoeba castellanii str. Neff	14914078
ACA1_245710	CDS	ACA1_245710	NW_004457323.1	524555	524873	R	encoded by transcript ACA1_245710A; uncharacterized protein	complement(join(524555..524796,524840..524873))	Acanthamoeba castellanii str. Neff	14913895
ACA1_245720	CDS	ACA1_245720	NW_004457323.1	525229	526146	D	encoded by transcript ACA1_245720A; uncharacterized protein	join(525229..525838,525934..525998,526072..>526146)	Acanthamoeba castellanii str. Neff	14913896
ACA1_245830	CDS	ACA1_245830	NW_004457323.1	526303	527231	R	encoded by transcript ACA1_245830A; alpha/beta hydrolase domain containing protein	complement(join(<526303..526400,526514..526577,526669..526755,526835..526889,526980..527053,527139..>527231))	Acanthamoeba castellanii str. Neff	14913897
ACA1_245940	CDS	ACA1_245940	NW_004457323.1	528843	530833	D	encoded by transcript ACA1_245940A; uncharacterized protein	join(528843..528852,529089..529175,529281..529382,529480..529549,529683..529806,529896..529980,530077..530591,530669..530833)	Acanthamoeba castellanii str. Neff	14913898
ACA1_245950	CDS	ACA1_245950	NW_004457323.1	531252	531775	D	encoded by transcript ACA1_245950A; CBS domain containing protein	join(531252..531272,531356..531775)	Acanthamoeba castellanii str. Neff	14913899
ACA1_245960	CDS	ACA1_245960	NW_004457323.1	531859	532343	R	encoded by transcript ACA1_245960A; uncharacterized protein	complement(join(531859..531897,531920..532239,532307..532343))	Acanthamoeba castellanii str. Neff	14913900
ACA1_245970	CDS	ACA1_245970	NW_004457323.1	532647	532905	D	encoded by transcript ACA1_245970A; uncharacterized protein	join(532647..532861,532878..532905)	Acanthamoeba castellanii str. Neff	14913901
ACA1_246080	CDS	ACA1_246080	NW_004457323.1	533248	534177	D	encoded by transcript ACA1_246080A; ATPase, AAA domain containing protein	join(533248..533369,533382..534177)	Acanthamoeba castellanii str. Neff	14913902
ACA1_246090	CDS	ACA1_246090	NW_004457323.1	534811	535334	D	encoded by transcript ACA1_246090A; CBS domain containing protein	join(534811..534837,534912..535334)	Acanthamoeba castellanii str. Neff	14913903
ACA1_246100	CDS	ACA1_246100	NW_004457323.1	535487	537668	R	encoded by transcript ACA1_246100A; ankyrin repeatcontaining protein	complement(join(535487..535773,535847..536023,536098..536206,536281..536615,536738..536905,537071..537668))	Acanthamoeba castellanii str. Neff	14913904
ACA1_246110	CDS	ACA1_246110	NW_004457323.1	538208	539023	D	encoded by transcript ACA1_246110A; uncharacterized protein	join(538208..538549,538580..539023)	Acanthamoeba castellanii str. Neff	14913905
ACA1_246120	CDS	ACA1_246120	NW_004457323.1	538576	538776	R	encoded by transcript ACA1_246120A; uncharacterized protein	complement(538576..538776)	Acanthamoeba castellanii str. Neff	14913906
ACA1_246130	CDS	ACA1_246130	NW_004457323.1	539179	541085	R	encoded by transcript ACA1_246130A; PhytanoylCoA dioxygenase (PhyH) superfamily protein	complement(join(539179..539262,539337..539434,539517..539628,539749..539903,540027..540103,540201..540270,540442..540520,540712..540849,540972..541085))	Acanthamoeba castellanii str. Neff	14913829
ACA1_246140	CDS	ACA1_246140	NW_004457323.1	541701	542506	R	encoded by transcript ACA1_246140A; GATA zinc finger domain containing protein	complement(join(541701..542079,542169..542506))	Acanthamoeba castellanii str. Neff	14913830
ACA1_246150	CDS	ACA1_246150	NW_004457323.1	543110	548724	R	encoded by transcript ACA1_246150A; RhoGEF domain containing protein	complement(join(543110..543327,543420..543593,543701..543800,543914..544066,544151..544314,544396..544597,544711..544898,545017..545095,545229..545441,545586..545843,545939..546047,546375..546468,546560..546632,546704..546760,547031..547288,547358..547484,547694..547787,547879..547951,548023..548724))	Acanthamoeba castellanii str. Neff	14913831
ACA1_246260	CDS	ACA1_246260	NW_004457323.1	549989	550585	D	encoded by transcript ACA1_246260A; uncharacterized protein	join(549989..550001,550113..550340,550436..550529,550576..550585)	Acanthamoeba castellanii str. Neff	14913832
ACA1_246370	CDS	ACA1_246370	NW_004457323.1	551139	551789	R	encoded by transcript ACA1_246370A; uncharacterized protein	complement(join(551139..551144,551209..551263,551333..551430,551541..551789))	Acanthamoeba castellanii str. Neff	14913833
ACA1_246380	CDS	ACA1_246380	NW_004457323.1	551881	552615	R	encoded by transcript ACA1_246380A; uncharacterized protein	complement(join(551881..551967,552049..552119,552444..552615))	Acanthamoeba castellanii str. Neff	14913834
ACA1_246490	CDS	ACA1_246490	NW_004457323.1	552685	556636	R	encoded by transcript ACA1_246490A; oxidoreductase, aldo/keto reductase superfamily protein	complement(join(552685..552771,552853..552923,553041..553240,553325..553397,553671..553794,553891..554030,554125..554231,554298..554412,554513..554774,554841..555005,555104..555232,555352..555485,555640..555785,555958..556094,556192..556328,556432..556549,556622..556636))	Acanthamoeba castellanii str. Neff	14913835
ACA1_246500	CDS	ACA1_246500	NW_004457323.1	557065	561660	R	encoded by transcript ACA1_246500A; uncharacterized protein	complement(join(557065..557308,557573..561311,561615..561660))	Acanthamoeba castellanii str. Neff	14913836
ACA1_246510	CDS	ACA1_246510	NW_004457323.1	562387	566065	D	encoded by transcript ACA1_246510A; protein phosphatase 2c-related protein	join(562387..563559,563690..563756,563858..563928,564013..564110,564182..564239,564315..564427,564508..564565,564638..564754,564869..565003,565115..565179,565268..565324,565390..565496,565749..566065)	Acanthamoeba castellanii str. Neff	14913837
ACA1_246520	CDS	ACA1_246520	NW_004457323.1	566353	569573	D	encoded by transcript ACA1_246520A; tetratricopeptide repeat domain containing protein	join(566353..566554,566610..566680,566795..566938,567067..567110,567184..567230,567313..567380,567437..567505,567619..567659,567719..568110,568206..568274,568361..568535,568601..569573)	Acanthamoeba castellanii str. Neff	14913838
ACA1_246530	CDS	ACA1_246530	NW_004457323.1	569834	570525	D	encoded by transcript ACA1_246530A; uncharacterized protein	join(569834..569947,570068..570306,570414..570525)	Acanthamoeba castellanii str. Neff	14913820
ACA1_246540	CDS	ACA1_246540	NW_004457323.1	570621	574224	D	encoded by transcript ACA1_246540A; thioredoxin, putative	join(570621..570762,570865..570990,571069..571319,571494..571843,571926..572006,572081..572232,572330..572397,572463..572546,572633..572690,572782..572870,572946..573022,573108..573263,573364..573485,573573..573667,573837..573890,573973..574224)	Acanthamoeba castellanii str. Neff	14913821
ACA1_246650	CDS	ACA1_246650	NW_004457323.1	574572	576368	R	encoded by transcript ACA1_246650A; Smr domain containing protein	complement(join(574572..574860,574957..575051,575157..575261,575365..575496,575663..575736,575827..575933,576017..576089,576305..>576368))	Acanthamoeba castellanii str. Neff	14913822
ACA1_246760	CDS	ACA1_246760	NW_004457323.1	576597	577892	D	encoded by transcript ACA1_246760A; uncharacterized protein	join(576597..576647,576669..576753,576841..576935,577017..577892)	Acanthamoeba castellanii str. Neff	14913823
ACA1_246770	CDS	ACA1_246770	NW_004457323.1	578179	579888	D	encoded by transcript ACA1_246770A; Ser/Thr phosphatase family superfamily protein	join(578179..578361,578451..578592,578671..578850,578989..579107,579230..579340,579414..579475,579594..579888)	Acanthamoeba castellanii str. Neff	14913824
ACA1_246780	CDS	ACA1_246780	NW_004457323.1	580015	580995	R	encoded by transcript ACA1_246780A; Ras subfamily protein	complement(join(580015..580226,580316..580437,580489..580522,580610..580698,580796..580874,580956..580995))	Acanthamoeba castellanii str. Neff	14913825
ACA1_246790	CDS	ACA1_246790	NW_004457323.1	581302	581701	D	encoded by transcript ACA1_246790A; thioredoxin-1, putative	join(581302..581367,581450..581701)	Acanthamoeba castellanii str. Neff	14913826
ACA1_246800	CDS	ACA1_246800	NW_004457323.1	582331	585855	R	encoded by transcript ACA1_246800A; Ca2+/calmodulin-dependent protein kinase	complement(join(582331..582356,582405..582420,582640..582744,582856..582987,583005..583097,583238..583341,583473..583593,583840..584112,584130..584939,585014..585176,585262..585310,585359..585449,585544..585645,585721..585855))	Acanthamoeba castellanii str. Neff	14913827
ACA1_246810	CDS	ACA1_246810	NW_004457323.1	586077	587739	R	encoded by transcript ACA1_246810A; KH domain containing protein	complement(join(586077..586225,586328..586434,586518..586590,586704..586826,586961..587009,587091..587212,587334..587739))	Acanthamoeba castellanii str. Neff	14913828
ACA1_246820	CDS	ACA1_246820	NW_004457323.1	588228	593914	D	encoded by transcript ACA1_246820A; SNF2 family Nterminal domain containing protein	join(588228..588237,588409..588686,588804..588867,588979..589715,589905..590067,590185..590282,590381..590534,590607..590706,590815..590937,591134..591242,591343..591444,591551..591637,591689..591851,591998..592143,592229..592945,593069..593296,593374..593436,593530..593671,593760..593914)	Acanthamoeba castellanii str. Neff	14914047
ACA1_246830	CDS	ACA1_246830	NW_004457323.1	593978	597545	R	encoded by transcript ACA1_246830A; ERCC4 domain containing protein	complement(join(593978..594199,594251..594649,594723..595407,595508..595616,595726..596572,596653..596759,596826..597002,597132..597252,597318..597383,597468..597545))	Acanthamoeba castellanii str. Neff	14914048
ACA1_246840	CDS	ACA1_246840	NW_004457323.1	597787	598850	R	encoded by transcript ACA1_246840A; uncharacterized protein	complement(join(597787..598725,598827..598850))	Acanthamoeba castellanii str. Neff	14914049
ACA1_246850	CDS	ACA1_246850	NW_004457323.1	599106	601262	R	encoded by transcript ACA1_246850A; WD domain, Gbeta repeat-containing protein	complement(join(599106..599528,599618..599743,599833..599958,599999..600094,600170..600394,600484..600569,600663..600799,600888..600969,601148..601262))	Acanthamoeba castellanii str. Neff	14914050
ACA1_246860	CDS	ACA1_246860	NW_004457323.1	601379	602329	R	encoded by transcript ACA1_246860A; putative rab family GTPbinding protein	complement(join(601379..601533,601614..601719,601801..601958,602083..602329))	Acanthamoeba castellanii str. Neff	14914051
ACA1_247070	CDS	ACA1_247070	NW_004457323.1	614741	615249	D	encoded by transcript ACA1_247070A; uncharacterized protein	join(614741..614953,615051..615116,615190..615249)	Acanthamoeba castellanii str. Neff	14914052
ACA1_247080	CDS	ACA1_247080	NW_004457323.1	615433	616415	D	encoded by transcript ACA1_247080A; EF hand domain containing protein	join(615433..615468,615546..615594,615671..615750,615830..616052,616090..616415)	Acanthamoeba castellanii str. Neff	14914053
ACA1_247090	CDS	ACA1_247090	NW_004457323.1	616504	617327	R	encoded by transcript ACA1_247090A; uncharacterized protein	complement(join(616504..617020,617098..617327))	Acanthamoeba castellanii str. Neff	14914054
ACA1_247100	CDS	ACA1_247100	NW_004457323.1	617640	617945	D	encoded by transcript ACA1_247100A; uncharacterized protein	617640..617945	Acanthamoeba castellanii str. Neff	14914055
ACA1_247110	CDS	ACA1_247110	NW_004457323.1	618050	625058	D	encoded by transcript ACA1_247110A; ATPase family associated with various cellular activities (AAA) domain containing protein	join(618050..618098,618343..618488,618562..618626,618734..618864,618989..619104,619194..619331,619431..619614,619689..619789,619917..620095,620169..620193,620398..620474,620588..621071,621158..621996,622096..622170,622234..622316,622402..622594,622713..623060,623182..623378,623446..623692,623818..624003,624075..624135,624232..624283,624352..624466,624545..624674,624765..624844,624956..625058)	Acanthamoeba castellanii str. Neff	14913972
ACA1_247120	CDS	ACA1_247120	NW_004457323.1	625189	627054	R	encoded by transcript ACA1_247120A; K+ channel tetramerization subfamily protein	complement(join(625189..625356,625480..625608,625802..626049,626139..626227,626291..626939,627009..627054))	Acanthamoeba castellanii str. Neff	14913973
ACA1_247140	CDS	ACA1_247140	NW_004457323.1	628974	630649	D	encoded by transcript ACA1_247140A; uncharacterized protein	join(628974..629097,629193..629314,629397..629505,629574..629653,629722..629858,630021..630109,630176..630225,630316..630385,630456..630649)	Acanthamoeba castellanii str. Neff	14913975
ACA1_247150	CDS	ACA1_247150	NW_004457323.1	630727	632391	D	encoded by transcript ACA1_247150A; uncharacterized protein	join(630727..631359,631444..631569,631642..631749,631818..631937,632107..632391)	Acanthamoeba castellanii str. Neff	14913976
ACA1_247160	CDS	ACA1_247160	NW_004457323.1	632624	635526	D	encoded by transcript ACA1_247160A; HEAT repeat domain containing protein	join(632624..632715,632795..632895,632990..633420,633500..633689,633764..633988,634066..634150,634270..634828,634927..635035,635105..635125,635218..635339,635434..635526)	Acanthamoeba castellanii str. Neff	14913977
ACA1_247170	CDS	ACA1_247170	NW_004457323.1	635591	636566	D	encoded by transcript ACA1_247170A; HEAT repeat domain containing protein	join(635591..635681,635785..635941,636013..636093,636208..636300,636395..636566)	Acanthamoeba castellanii str. Neff	14913978
ACA1_247180	CDS	ACA1_247180	NW_004457323.1	638390	638773	R	encoded by transcript ACA1_247180A; isoprenylcysteine carboxyl methyltransferase	complement(638390..638773)	Acanthamoeba castellanii str. Neff	14913979
ACA1_247190	CDS	ACA1_247190	NW_004457323.1	638933	639427	R	encoded by transcript ACA1_247190A; uncharacterized protein	complement(join(638933..638978,639068..639111,639194..639427))	Acanthamoeba castellanii str. Neff	14913980
ACA1_247200	CDS	ACA1_247200	NW_004457323.1	640509	642671	R	encoded by transcript ACA1_247200A; uncharacterized protein	complement(join(640509..640768,640904..641438,641510..641679,641835..641964,642038..642255,642313..642358,642483..642557,642603..642671))	Acanthamoeba castellanii str. Neff	14913981
ACA1_247210	CDS	ACA1_247210	NW_004457323.1	646750	649014	D	encoded by transcript ACA1_247210A; uncharacterized protein	join(646750..646949,647155..647260,647416..647547,647695..647823,647862..648209,648267..648554,648616..649014)	Acanthamoeba castellanii str. Neff	14913982
ACA1_247220	CDS	ACA1_247220	NW_004457323.1	649391	650135	R	encoded by transcript ACA1_247220A; isoprenylcysteine carboxyl methyltransferase (icmt) family protein	complement(join(649391..649828,649905..650135))	Acanthamoeba castellanii str. Neff	14913983
ACA1_247230	CDS	ACA1_247230	NW_004457323.1	650245	652008	D	encoded by transcript ACA1_247230A; uncharacterized protein	join(650245..651836,651918..652008)	Acanthamoeba castellanii str. Neff	14913984
ACA1_247240	CDS	ACA1_247240	NW_004457323.1	652204	654427	R	encoded by transcript ACA1_247240A; ATPase/histidine kinase/DNA gyrase B/HSP90 domain containing protein	complement(join(652204..652434,652512..653612,653708..653929,654040..654155,654265..654427))	Acanthamoeba castellanii str. Neff	14913985
ACA1_247250	CDS	ACA1_247250	NW_004457323.1	654830	657472	R	encoded by transcript ACA1_247250A; uncharacterized protein	complement(join(654830..655678,655747..656124,656213..656489,656603..656937,657026..657130,657314..657472))	Acanthamoeba castellanii str. Neff	14913986
ACA1_247260	CDS	ACA1_247260	NW_004457323.1	657840	660576	D	encoded by transcript ACA1_247260A; SET domain containing protein	join(657840..657894,658014..658127,658343..658515,658628..658790,658881..659026,659128..659295,659385..659459,659540..659706,659789..659906,659982..660149,660217..660576)	Acanthamoeba castellanii str. Neff	14913987
ACA1_247490	CDS	ACA1_247490	NW_004457323.1	668287	668909	D	encoded by transcript ACA1_247490A; uncharacterized protein	join(668287..668581,668687..668788,668902..668909)	Acanthamoeba castellanii str. Neff	14913990
ACA1_247500	CDS	ACA1_247500	NW_004457323.1	669104	670886	D	encoded by transcript ACA1_247500A; betalactamase	join(669104..669126,669191..669279,669348..669484,669554..669657,669730..669880,669948..670025,670094..670172,670247..670423,670491..670658,670744..670886)	Acanthamoeba castellanii str. Neff	14913991
ACA1_247510	CDS	ACA1_247510	NW_004457323.1	672930	675049	R	encoded by transcript ACA1_247510A; uncharacterized protein	complement(join(672930..673293,673361..673455,673542..673696,674026..674229,674590..675049))	Acanthamoeba castellanii str. Neff	14913992
ACA1_247520	CDS	ACA1_247520	NW_004457323.1	678503	683064	R	encoded by transcript ACA1_247520A; uncharacterized protein	complement(join(678503..679102,679245..679349,679411..680619,680662..683064))	Acanthamoeba castellanii str. Neff	14913993
ACA1_247530	CDS	ACA1_247530	NW_004457323.1	683607	684632	R	encoded by transcript ACA1_247530A; uncharacterized protein	complement(683607..684632)	Acanthamoeba castellanii str. Neff	14913871
ACA1_247550	CDS	ACA1_247550	NW_004457323.1	686315	688680	R	encoded by transcript ACA1_247550A; tRNA guanine transglycosylase, putative	complement(join(686315..686814,686920..687212,687354..687506,687628..687662,687829..687922,688032..688099,688170..688225,688320..688680))	Acanthamoeba castellanii str. Neff	14913873
ACA1_247560	CDS	ACA1_247560	NW_004457323.1	689333	690294	R	encoded by transcript ACA1_247560A; uncharacterized protein	complement(join(689333..689540,689606..689810,689868..690152,690213..690294))	Acanthamoeba castellanii str. Neff	14913874
ACA1_247570	CDS	ACA1_247570	NW_004457323.1	690529	690826	R	encoded by transcript ACA1_247570A; uncharacterized protein	complement(join(690529..690572,690595..690826))	Acanthamoeba castellanii str. Neff	14913875
ACA1_247580	CDS	ACA1_247580	NW_004457323.1	691290	691981	R	encoded by transcript ACA1_247580A; uncharacterized protein	complement(join(691290..691459,691551..691649,691745..691809,691911..691981))	Acanthamoeba castellanii str. Neff	14913876
ACA1_247590	CDS	ACA1_247590	NW_004457323.1	692053	694064	R	encoded by transcript ACA1_247590A; uncharacterized protein	complement(join(692053..692260,692333..692442,692545..692777,692837..693359,693463..693609,693721..693869,693983..694064))	Acanthamoeba castellanii str. Neff	14913877
ACA1_247600	CDS	ACA1_247600	NW_004457323.1	694930	695872	D	encoded by transcript ACA1_247600A; IQ calmodulinbinding motif domain containing protein	join(694930..695009,695107..695197,695465..695581,695714..695872)	Acanthamoeba castellanii str. Neff	14913878
ACA1_247610	CDS	ACA1_247610	NW_004457323.1	695909	698456	D	encoded by transcript ACA1_247610A; FYVEtype Zn finger-containing protein	join(695909..695974,696081..696140,696247..696336,696456..696584,696738..696828,696923..697008,697080..697152,697217..697903,697980..698083,698203..698239,698374..698456)	Acanthamoeba castellanii str. Neff	14913879
ACA1_247620	CDS	ACA1_247620	NW_004457323.1	699087	700973	D	encoded by transcript ACA1_247620A; uncharacterized protein	699087..700973	Acanthamoeba castellanii str. Neff	14913880
ACA1_247640	CDS	ACA1_247640	NW_004457323.1	702128	702601	R	encoded by transcript ACA1_247640A; uncharacterized protein	complement(702128..702601)	Acanthamoeba castellanii str. Neff	14913882
ACA1_247650	CDS	ACA1_247650	NW_004457323.1	702698	703844	D	encoded by transcript ACA1_247650A; uncharacterized protein	join(702698..702907,703042..703236,703359..703679,703728..703844)	Acanthamoeba castellanii str. Neff	14913883
ACA1_247660	CDS	ACA1_247660	NW_004457323.1	704825	707163	D	encoded by transcript ACA1_247660A; RNAdirected DNA polymerase subfamily protein	join(704825..705517,705532..707163)	Acanthamoeba castellanii str. Neff	14913952
ACA1_247670	CDS	ACA1_247670	NW_004457323.1	707640	708104	D	encoded by transcript ACA1_247670A; integrase domain containing protein	join(707640..707829,707857..708104)	Acanthamoeba castellanii str. Neff	14913953
ACA1_247680	CDS	ACA1_247680	NW_004457323.1	709833	710585	R	encoded by transcript ACA1_247680A; uncharacterized protein	complement(join(709833..710007,710044..710585))	Acanthamoeba castellanii str. Neff	14913954
ACA1_247690	CDS	ACA1_247690	NW_004457323.1	710756	712007	R	encoded by transcript ACA1_247690A; uncharacterized protein	complement(join(710756..711857,711886..712007))	Acanthamoeba castellanii str. Neff	14913955
ACA1_247700	CDS	ACA1_247700	NW_004457323.1	712268	712537	R	encoded by transcript ACA1_247700A; uncharacterized protein	complement(712268..712537)	Acanthamoeba castellanii str. Neff	14913956
ACA1_247710	CDS	ACA1_247710	NW_004457323.1	712789	714555	R	encoded by transcript ACA1_247710A; uncharacterized protein	complement(join(712789..713031,713049..713246,713341..713418,713659..713990,714042..714555))	Acanthamoeba castellanii str. Neff	14913957
ACA1_247720	CDS	ACA1_247720	NW_004457323.1	717071	717460	R	encoded by transcript ACA1_247720A; uncharacterized protein	complement(join(717071..717262,717434..717460))	Acanthamoeba castellanii str. Neff	14913958
ACA1_247730	CDS	ACA1_247730	NW_004457323.1	719267	723097	D	encoded by transcript ACA1_247730A; uncharacterized protein	join(719267..719720,720159..720305,720692..720975,721031..721125,721192..721262,721413..721724,722008..722165,722288..723097)	Acanthamoeba castellanii str. Neff	14913959
ACA1_247740	CDS	ACA1_247740	NW_004457323.1	727042	728768	D	encoded by transcript ACA1_247740A; uncharacterized protein	join(727042..727050,727222..727500,728025..728286,728522..728575,728587..728768)	Acanthamoeba castellanii str. Neff	14913960
ACA1_347660	CDS	ACA1_347660	NW_004457322.1	5879	7137	D	encoded by transcript ACA1_347660A; Fructose-2,6-bisphosphate 2-phosphatase	join(<5879..6110,6180..6260,6318..6347,6518..6717,6928..7137)	Acanthamoeba castellanii str. Neff	14913815
ACA1_347670	CDS	ACA1_347670	NW_004457322.1	7212	8976	R	encoded by transcript ACA1_347670A; leucine carboxyl methyl transferase	complement(join(7212..7362,7443..7685,7934..8030,8117..8261,8402..8529,8659..8714,8801..8976))	Acanthamoeba castellanii str. Neff	14913813
ACA1_347680	CDS	ACA1_347680	NW_004457322.1	9103	10616	D	encoded by transcript ACA1_347680A; uncharacterized protein	join(9103..9132,9240..9323,9349..9463,9586..9950,10052..10195,10276..10346,10523..>10616)	Acanthamoeba castellanii str. Neff	14913814
ACA1_347790	CDS	ACA1_347790	NW_004457322.1	14299	14854	D	encoded by transcript ACA1_347790A; uncharacterized protein	join(14299..14362,14531..14623,14751..14854)	Acanthamoeba castellanii str. Neff	14913816
ACA1_347800	CDS	ACA1_347800	NW_004457322.1	15768	16127	R	encoded by transcript ACA1_347800A; uncharacterized protein	complement(join(15768..15776,15832..15974,16061..16127))	Acanthamoeba castellanii str. Neff	14913817
ACA1_347910	CDS	ACA1_347910	NW_004457322.1	20571	22189	R	encoded by transcript ACA1_347910A; voltagesensor containing phosphatase	complement(join(20571..20708,20797..20882,21005..21142,21281..21391,21549..21659,21779..21891,21993..22189))	Acanthamoeba castellanii str. Neff	14913818
ACA1_347920	CDS	ACA1_347920	NW_004457322.1	22274	22967	R	encoded by transcript ACA1_347920A; uncharacterized protein	complement(join(22274..22292,22436..22679,22784..>22967))	Acanthamoeba castellanii str. Neff	14913819
ACA1_146860	CDS	ACA1_146860	NW_004457321.1	128	9703	R	encoded by transcript ACA1_146860A; HEAT repeat-containing protein	complement(join(<128..186,258..510,610..777,2008..2236,2311..2498,2624..2841,2923..3094,3183..3311,3383..3493,3579..3660,3781..3941,4384..4433,4555..4732,4862..4998,5103..5271,5374..5505,5599..5769,5839..6518,6711..6784,6881..7034,7123..7333,7452..7591,7713..7764,7859..7988,8120..8321,8416..8545,8650..8748,8839..8990,9109..9157,9316..9436,9567..9703))	Acanthamoeba castellanii str. Neff	14913812
ACA1_147270	CDS	ACA1_147270	NW_004457321.1	14821	16951	D	encoded by transcript ACA1_147270A; uncharacterized protein	join(14821..14830,14932..15973,16366..16951)	Acanthamoeba castellanii str. Neff	14913802
ACA1_147380	CDS	ACA1_147380	NW_004457321.1	17041	23531	R	encoded by transcript ACA1_147380A; uncharacterized protein	complement(join(17041..17859,17963..18081,18178..18291,18369..18458,18528..18638,18742..18805,18892..19036,19130..19316,19404..19510,19605..19817,19924..20049,20149..20251,20353..20479,20578..20678,20763..21024,21285..21379,21455..21496,21561..21636,21713..21815,21899..22047,22124..22197,22292..22485,22568..22661,22721..22847,23059..23120,23210..23277,23344..23531))	Acanthamoeba castellanii str. Neff	14913799
ACA1_147390	CDS	ACA1_147390	NW_004457321.1	23792	25137	R	encoded by transcript ACA1_147390A; acetyltransferase, GNAT superfamily protein	complement(join(23792..23948,24018..24170,24304..24382,24471..24568,24648..24814,24896..24949,25039..25137))	Acanthamoeba castellanii str. Neff	14913800
ACA1_147400	CDS	ACA1_147400	NW_004457321.1	25273	26648	D	encoded by transcript ACA1_147400A; EF hand domain containing protein	join(25273..25305,25453..25698,25770..25831,25929..26065,26146..26207,26287..26483,26576..26648)	Acanthamoeba castellanii str. Neff	14913801
ACA1_147410	CDS	ACA1_147410	NW_004457321.1	26760	27560	R	encoded by transcript ACA1_147410A; uncharacterized protein	complement(join(26760..27104,27183..27238,27374..27560))	Acanthamoeba castellanii str. Neff	14913803
ACA1_147520	CDS	ACA1_147520	NW_004457321.1	28802	31190	D	encoded by transcript ACA1_147520A; ADPribosylarginine hydrolase	join(28802..28828,28915..29030,29118..29201,29293..29360,29461..29562,29654..29694,29778..29857,29966..30045,30130..30257,30342..30453,30703..30769,30882..31004,31103..31190)	Acanthamoeba castellanii str. Neff	14913804
ACA1_147530	CDS	ACA1_147530	NW_004457321.1	31236	33418	R	encoded by transcript ACA1_147530A; uncharacterized protein	complement(join(31236..31581,31687..31820,31895..31981,32082..32186,32324..32435,32561..32627,32747..32846,32912..32996,33129..33418))	Acanthamoeba castellanii str. Neff	14913805
ACA1_147540	CDS	ACA1_147540	NW_004457321.1	33951	34896	D	encoded by transcript ACA1_147540A; uncharacterized protein	join(33951..34257,34319..34896)	Acanthamoeba castellanii str. Neff	14913806
ACA1_147550	CDS	ACA1_147550	NW_004457321.1	35005	38036	R	encoded by transcript ACA1_147550A; transmembrane amino acid transporter protein	complement(join(35005..35683,35788..36457,36555..36773,36842..36928,37353..37493,37645..37733,37963..38036))	Acanthamoeba castellanii str. Neff	14913793
ACA1_147560	CDS	ACA1_147560	NW_004457321.1	38206	40396	D	encoded by transcript ACA1_147560A; uncharacterized protein	join(38206..39337,39444..39565,39671..40396)	Acanthamoeba castellanii str. Neff	14913794
ACA1_147570	CDS	ACA1_147570	NW_004457321.1	40819	41532	D	encoded by transcript ACA1_147570A; uncharacterized protein	join(40819..40827,40966..41037,41139..41489,41509..41532)	Acanthamoeba castellanii str. Neff	14913795
ACA1_147680	CDS	ACA1_147680	NW_004457321.1	42647	45856	D	encoded by transcript ACA1_147680A; uncharacterized protein	join(42647..42671,42778..42818,42936..43007,43078..43905,43926..44010,44066..44197,44208..44392,44477..44984,45064..45198,45280..45359,45395..45411,45523..45614,45735..45856)	Acanthamoeba castellanii str. Neff	14913796
ACA1_147690	CDS	ACA1_147690	NW_004457321.1	46253	48372	R	encoded by transcript ACA1_147690A; uncharacterized protein	complement(join(46253..46543,46641..46986,47082..47331,47427..47917,48101..48372))	Acanthamoeba castellanii str. Neff	14913797
ACA1_147700	CDS	ACA1_147700	NW_004457321.1	49109	49492	R	encoded by transcript ACA1_147700A; uncharacterized protein	complement(49109..49492)	Acanthamoeba castellanii str. Neff	14913798
ACA1_147710	CDS	ACA1_147710	NW_004457321.1	50335	55067	D	encoded by transcript ACA1_147710A; FGGAP repeat domain containing protein	join(50335..50417,50561..50789,50893..51070,51134..51272,51373..51487,51575..51653,51751..51902,51976..52049,52194..52328,52427..52459,52542..52594,52659..52920,53076..53203,53301..53494,53616..53967,54044..54139,54298..54370,54477..54600,54771..54941,55038..55067)	Acanthamoeba castellanii str. Neff	14913784
ACA1_147720	CDS	ACA1_147720	NW_004457321.1	55453	56004	D	encoded by transcript ACA1_147720A; uncharacterized protein	join(55453..55568,55698..56004)	Acanthamoeba castellanii str. Neff	14913785
ACA1_147730	CDS	ACA1_147730	NW_004457321.1	56659	57052	D	encoded by transcript ACA1_147730A; uncharacterized protein	join(56659..56784,56876..57052)	Acanthamoeba castellanii str. Neff	14913786
ACA1_147740	CDS	ACA1_147740	NW_004457321.1	57329	59040	R	encoded by transcript ACA1_147740A; CBS domain containing protein	complement(join(57329..57489,57609..57705,57789..57953,58051..58196,58284..58427,58528..58751,58834..58892,58975..59040))	Acanthamoeba castellanii str. Neff	14913787
ACA1_147750	CDS	ACA1_147750	NW_004457321.1	59379	66771	R	encoded by transcript ACA1_147750A; phospholipase D active site domain containing protein	complement(join(59379..59510,59642..59780,59866..60078,60152..60210,60302..60408,60486..60550,60666..60844,60985..61098,61212..62119,62200..62404,62489..62769,62829..63114,63203..63247,63333..63476,63559..63728,63837..63900,63975..64125,64187..64350,64430..64447,64505..64650,64755..65208,65282..65539,65650..65805,66154..66340,66722..66771))	Acanthamoeba castellanii str. Neff	14913788
ACA1_147760	CDS	ACA1_147760	NW_004457321.1	67195	67901	R	encoded by transcript ACA1_147760A; uncharacterized protein	complement(join(67195..67240,67312..67901))	Acanthamoeba castellanii str. Neff	14913789
ACA1_147770	CDS	ACA1_147770	NW_004457321.1	68964	70066	D	encoded by transcript ACA1_147770A; uncharacterized protein	join(68964..69257,69290..69330,69351..69432,69914..70066)	Acanthamoeba castellanii str. Neff	14913790
ACA1_147880	CDS	ACA1_147880	NW_004457321.1	70162	71766	R	encoded by transcript ACA1_147880A; RNA recognition motif domain containing protein	complement(join(70162..70294,70398..70783,70874..71002,71109..71211,71291..71365,71455..71540,71743..>71766))	Acanthamoeba castellanii str. Neff	14913791
ACA1_147990	CDS	ACA1_147990	NW_004457321.1	71767	73582	D	encoded by transcript ACA1_147990A; uncharacterized protein	join(71767..71825,71893..71941,72044..72137,72475..72560,72680..72775,72876..72952,73252..73582)	Acanthamoeba castellanii str. Neff	14913792
ACA1_148000	CDS	ACA1_148000	NW_004457321.1	74616	76155	D	encoded by transcript ACA1_148000A; GMC oxidoreductase	join(74616..74761,74872..74912,74972..75056,75151..75207,75275..75372,75472..75603,75694..75757,75796..75846,75962..76077,76103..76155)	Acanthamoeba castellanii str. Neff	14913807
ACA1_148010	CDS	ACA1_148010	NW_004457321.1	77839	78966	D	encoded by transcript ACA1_148010A; glucosemethanol-choline oxidoreductase	join(77839..77859,77951..78058,78232..78347,78441..78663,78742..78966)	Acanthamoeba castellanii str. Neff	14913808
ACA1_148020	CDS	ACA1_148020	NW_004457321.1	79143	82631	R	encoded by transcript ACA1_148020A; uncharacterized protein	complement(join(79143..79410,79495..79640,79751..79894,79974..80250,80324..80482,80558..81016,81075..81208,81283..81381,81423..81494,81751..82007,82080..82203,82422..82631))	Acanthamoeba castellanii str. Neff	14913809
ACA1_148130	CDS	ACA1_148130	NW_004457321.1	83860	84882	D	encoded by transcript ACA1_148130A; Mpv17 / PMP22 family protein	join(83860..84014,84092..84212,84334..84494,84606..84882)	Acanthamoeba castellanii str. Neff	14913810
ACA1_148240	CDS	ACA1_148240	NW_004457321.1	91361	93587	D	encoded by transcript ACA1_148240A; uncharacterized protein	join(91361..91411,91523..91618,91728..91845,91941..92138,92263..92520,92640..92777,92872..93417,93496..93587)	Acanthamoeba castellanii str. Neff	14913811
ACA1_339690	CDS	ACA1_339690	NW_004457320.1	6199	6669	R	encoded by transcript ACA1_339690A; uncharacterized protein	complement(6199..6669)	Acanthamoeba castellanii str. Neff	14913772
ACA1_339700	CDS	ACA1_339700	NW_004457320.1	8347	10536	D	encoded by transcript ACA1_339700A; serine/threonine protein kinase, putative	join(8347..8373,8490..8651,8690..8974,9077..9229,9324..9523,9566..9930,10004..10172,10515..10536)	Acanthamoeba castellanii str. Neff	14913768
ACA1_339710	CDS	ACA1_339710	NW_004457320.1	12071	12366	D	encoded by transcript ACA1_339710A; uncharacterized protein	join(12071..12136,12214..12366)	Acanthamoeba castellanii str. Neff	14913781
ACA1_339720	CDS	ACA1_339720	NW_004457320.1	12381	12985	D	encoded by transcript ACA1_339720A; uncharacterized protein	join(12381..12515,12620..12704,12792..12985)	Acanthamoeba castellanii str. Neff	14913782
ACA1_339730	CDS	ACA1_339730	NW_004457320.1	13210	14551	D	encoded by transcript ACA1_339730A; serine/threonine protein kinase, putative	join(13210..13393,13485..13606,13693..13926,14047..14232,14259..14310,14418..14551)	Acanthamoeba castellanii str. Neff	14913783
ACA1_339740	CDS	ACA1_339740	NW_004457320.1	14706	18528	D	encoded by transcript ACA1_339740A; serine/threonine protein kinase	join(14706..15275,15389..15747,15839..15983,16086..16254,16333..16546,16618..16680,16763..17043,17184..17500,17591..17759,17837..18142,18236..18528)	Acanthamoeba castellanii str. Neff	14913769
ACA1_339750	CDS	ACA1_339750	NW_004457320.1	19132	19911	R	encoded by transcript ACA1_339750A; Ras subfamily protein	complement(join(19132..19189,19271..19911))	Acanthamoeba castellanii str. Neff	14913770
ACA1_339760	CDS	ACA1_339760	NW_004457320.1	20021	21702	R	encoded by transcript ACA1_339760A; alpha/beta hydrolase, putative	complement(join(20021..20239,20334..20437,20504..20579,20674..20737,20843..20971,21103..21242,21378..21468,21572..21702))	Acanthamoeba castellanii str. Neff	14913771
ACA1_339770	CDS	ACA1_339770	NW_004457320.1	21897	24164	D	encoded by transcript ACA1_339770A; metallophosphoesterase 1, putative	join(21897..22144,22240..22366,22454..22596,22708..22973,23126..23299,23370..23440,23682..24164)	Acanthamoeba castellanii str. Neff	14913773
ACA1_339880	CDS	ACA1_339880	NW_004457320.1	24281	29420	R	encoded by transcript ACA1_339880A; developmental protein	complement(join(24281..24464,24552..24718,24793..24931,25010..25116,25235..25565,25648..25683,25771..25955,26155..26206,26292..26396,26485..26579,26670..26804,26880..27231,27306..27412,27511..27769,27868..28013,28141..28362,28431..28600,28665..28846,28909..29040,29118..29253,29333..29420))	Acanthamoeba castellanii str. Neff	14913774
ACA1_339890	CDS	ACA1_339890	NW_004457320.1	29821	30639	R	encoded by transcript ACA1_339890A; plexin repeat domain containing protein	complement(join(29821..29978,30068..30481,30576..30639))	Acanthamoeba castellanii str. Neff	14913775
ACA1_339900	CDS	ACA1_339900	NW_004457320.1	30923	31524	R	encoded by transcript ACA1_339900A; uncharacterized protein	complement(join(30923..31252,31405..31524))	Acanthamoeba castellanii str. Neff	14913776
ACA1_339910	CDS	ACA1_339910	NW_004457320.1	31927	32988	R	encoded by transcript ACA1_339910A; uncharacterized protein	complement(join(31927..32479,32586..32835,32940..32988))	Acanthamoeba castellanii str. Neff	14913777
ACA1_339920	CDS	ACA1_339920	NW_004457320.1	33260	36557	D	encoded by transcript ACA1_339920A; Histone methylation protein DOT1	join(33260..33439,33520..33615,33689..33765,33837..33950,34036..34304,34380..34638,34724..35200,35267..36557)	Acanthamoeba castellanii str. Neff	14913778
ACA1_339930	CDS	ACA1_339930	NW_004457320.1	36900	40208	D	encoded by transcript ACA1_339930A; CHROMO domain containing protein	join(36900..37064,37199..37294,37365..37431,37558..37669,37749..37787,37871..37941,38041..38485,38574..39919,40066..40208)	Acanthamoeba castellanii str. Neff	14913779
ACA1_339940	CDS	ACA1_339940	NW_004457320.1	41380	44633	R	encoded by transcript ACA1_339940A; tetratricopeptide repeat domain containing protein	complement(join(41380..41752,41832..42145,42238..42470,42546..42668,42784..43198,43258..43383,43480..43560,43644..43733,43838..44006,44089..44455,44549..44633))	Acanthamoeba castellanii str. Neff	14913780
ACA1_099940	CDS	ACA1_099940	NW_004457319.1	4193	5077	D	encoded by transcript ACA1_099940A; uncharacterized protein	join(<4193..4292,4426..4533,4665..4774,4850..4922,4989..5077)	Acanthamoeba castellanii str. Neff	14913724
ACA1_099950	CDS	ACA1_099950	NW_004457319.1	5135	6822	R	encoded by transcript ACA1_099950A; uncharacterized protein	complement(join(5135..5299,5398..5512,5601..5683,5817..5913,5996..6396,6493..6822))	Acanthamoeba castellanii str. Neff	14913756
ACA1_099960	CDS	ACA1_099960	NW_004457319.1	8009	9320	D	encoded by transcript ACA1_099960A; diaminopimelate epimerase	join(8009..8232,8329..8474,8591..8945,9047..9320)	Acanthamoeba castellanii str. Neff	14913761
ACA1_099970	CDS	ACA1_099970	NW_004457319.1	9388	11926	R	encoded by transcript ACA1_099970A; transporter, major facilitator subfamily protein	complement(join(9388..9634,9759..9858,9954..10032,10122..10250,10347..10508,10600..10808,10871..10966,11083..11165,11292..11464,11586..11699,11783..11926))	Acanthamoeba castellanii str. Neff	14913762
ACA1_099980	CDS	ACA1_099980	NW_004457319.1	12129	13246	D	encoded by transcript ACA1_099980A; NmrA family protein	join(12129..12437,12542..13246)	Acanthamoeba castellanii str. Neff	14913752
ACA1_099990	CDS	ACA1_099990	NW_004457319.1	13412	13630	D	encoded by transcript ACA1_099990A; uncharacterized protein	13412..13630	Acanthamoeba castellanii str. Neff	14913753
ACA1_100000	CDS	ACA1_100000	NW_004457319.1	13888	16555	R	encoded by transcript ACA1_100000A; ABC2 type transporter superfamily protein	complement(join(13888..14033,14128..14331,14413..14539,14625..14840,14915..15411,15481..15626,15710..16202,16279..16555))	Acanthamoeba castellanii str. Neff	14913754
ACA1_100010	CDS	ACA1_100010	NW_004457319.1	17259	18828	R	encoded by transcript ACA1_100010A; cell division control protein 42, putative	complement(join(17259..17366,17488..17553,17656..17741,17887..17935,18015..18115,18138..18225,18317..18349,18444..18472,18558..18620,18780..18828))	Acanthamoeba castellanii str. Neff	14913755
ACA1_100020	CDS	ACA1_100020	NW_004457319.1	19194	20420	D	encoded by transcript ACA1_100020A; uncharacterized protein	join(19194..19412,19488..19559,19733..19832,19989..20147,20311..20420)	Acanthamoeba castellanii str. Neff	14913757
ACA1_100030	CDS	ACA1_100030	NW_004457319.1	20680	23328	D	encoded by transcript ACA1_100030A; uncharacterized protein	join(20680..20896,21159..21564,21909..22147,22206..22283,22373..22438,22535..23328)	Acanthamoeba castellanii str. Neff	14913758
ACA1_100040	CDS	ACA1_100040	NW_004457319.1	23435	24499	D	encoded by transcript ACA1_100040A; uncharacterized protein	join(23435..23702,23795..23916,24012..24200,24437..24499)	Acanthamoeba castellanii str. Neff	14913759
ACA1_100050	CDS	ACA1_100050	NW_004457319.1	24547	25282	D	encoded by transcript ACA1_100050A; DRAP deaminase	join(24547..24617,24718..25014,25108..25282)	Acanthamoeba castellanii str. Neff	14913760
ACA1_100060	CDS	ACA1_100060	NW_004457319.1	25438	27545	R	encoded by transcript ACA1_100060A; WDrepeat protein	complement(join(25438..25544,25616..25804,25917..26018,26100..26226,26273..26399,26496..26611,26683..26772,26869..27129,27195..27545))	Acanthamoeba castellanii str. Neff	14913763
ACA1_100070	CDS	ACA1_100070	NW_004457319.1	27704	31208	R	encoded by transcript ACA1_100070A; diacylglycerol kinase accessory domain containing protein	complement(join(27704..27879,27944..28091,28149..28334,28445..28916,29037..29151,29258..29403,29473..31208))	Acanthamoeba castellanii str. Neff	14913764
ACA1_100080	CDS	ACA1_100080	NW_004457319.1	31438	33282	R	encoded by transcript ACA1_100080A; NAD-dependent epimerase/dehydratase family protein	complement(join(31438..31531,31608..31708,31789..31943,32029..32208,32300..32361,32452..32543,32649..32762,32850..32941,33075..33282))	Acanthamoeba castellanii str. Neff	14913765
ACA1_100090	CDS	ACA1_100090	NW_004457319.1	33498	35790	R	encoded by transcript ACA1_100090A; Fbox domain containing protein	complement(join(33498..33545,33630..33749,33831..33953,34050..34224,34300..34354,34437..34485,34595..34675,34751..34860,34968..35038,35098..35188,35283..35380,35579..35790))	Acanthamoeba castellanii str. Neff	14913766
ACA1_100100	CDS	ACA1_100100	NW_004457319.1	36109	37814	D	encoded by transcript ACA1_100100A; uncharacterized protein	join(36109..36202,36279..36397,36494..36599,36690..36760,37153..37298,37371..37585,37654..37814)	Acanthamoeba castellanii str. Neff	14913767
ACA1_100110	CDS	ACA1_100110	NW_004457319.1	37866	39033	D	encoded by transcript ACA1_100110A; uncharacterized protein	join(37866..38446,38526..38658,38716..39033)	Acanthamoeba castellanii str. Neff	14913733
ACA1_100120	CDS	ACA1_100120	NW_004457319.1	39476	40898	D	encoded by transcript ACA1_100120A; Fbox domain containing protein	join(39476..39514,39612..39811,39882..39975,40066..40150,40221..40313,40378..40521,40587..40775,40834..40898)	Acanthamoeba castellanii str. Neff	14913734
ACA1_100130	CDS	ACA1_100130	NW_004457319.1	41315	44208	D	encoded by transcript ACA1_100130A; metal cation transporter, ZIP subfamily protein	join(41315..41657,41792..42150,42254..42310,42444..42508,42583..42652,42740..42803,42914..43017,43050..43127,43167..43194,43326..43568,43664..43989,44095..44208)	Acanthamoeba castellanii str. Neff	14913735
ACA1_100140	CDS	ACA1_100140	NW_004457319.1	44334	46397	R	encoded by transcript ACA1_100140A; aspartyl-tRNA synthetase	complement(join(44334..44345,44377..44472,44539..44652,44715..45086,45171..45346,45432..45600,45661..45788,45925..46181,46294..>46397))	Acanthamoeba castellanii str. Neff	14913736
ACA1_100150	CDS	ACA1_100150	NW_004457319.1	46854	49043	D	encoded by transcript ACA1_100150A; Flavinbinding monooxygenase-like subfamily protein	join(46854..47040,47154..47275,47374..47629,47718..47978,48040..48396,48469..48721,48839..49043)	Acanthamoeba castellanii str. Neff	14913737
ACA1_100160	CDS	ACA1_100160	NW_004457319.1	50361	52620	R	encoded by transcript ACA1_100160A; uncharacterized protein	complement(join(50361..50828,50940..51054,51144..51229,51319..51421,51512..52539,52550..52563,52611..52620))	Acanthamoeba castellanii str. Neff	14913738
ACA1_100170	CDS	ACA1_100170	NW_004457319.1	52835	54640	R	encoded by transcript ACA1_100170A; uncharacterized protein	complement(join(52835..53203,53384..53456,53586..53671,53741..53843,53937..54015,54077..54145,54226..54640))	Acanthamoeba castellanii str. Neff	14913739
ACA1_100180	CDS	ACA1_100180	NW_004457319.1	55717	55968	D	encoded by transcript ACA1_100180A; uncharacterized protein	<55717..>55968	Acanthamoeba castellanii str. Neff	14913740
ACA1_100410	CDS	ACA1_100410	NW_004457319.1	66539	72271	R	encoded by transcript ACA1_100410A; SAP domain containing protein	complement(join(66539..66838,66977..68016,68050..68092,68168..68320,68425..69003,69098..70429,70504..70722,70810..71411,71502..71563,71655..71725,72015..72059,72096..72193,72241..72271))	Acanthamoeba castellanii str. Neff	14913743
ACA1_100420	CDS	ACA1_100420	NW_004457319.1	72518	74992	D	encoded by transcript ACA1_100420A; glycine-tRNA ligase	join(72518..72740,72832..72936,73022..73082,73166..73302,73379..73525,73636..73911,73985..74067,74156..74383,74460..74544,74644..74720,74846..74992)	Acanthamoeba castellanii str. Neff	14913744
ACA1_100430	CDS	ACA1_100430	NW_004457319.1	76384	76958	R	encoded by transcript ACA1_100430A; IMP2 inner mitochondrial membrane protease family isoform 2, putative	complement(join(76384..76509,76592..76754,76873..76958))	Acanthamoeba castellanii str. Neff	14913745
ACA1_100440	CDS	ACA1_100440	NW_004457319.1	77430	80197	R	encoded by transcript ACA1_100440A; cytochrome p450 superfamily protein	complement(join(77430..77556,77630..77728,77831..77937,78022..78115,78217..78305,78429..78508,78570..78644,78735..78851,78955..79110,79228..79345,79537..79697,79828..79984,80132..80197))	Acanthamoeba castellanii str. Neff	14913746
ACA1_100450	CDS	ACA1_100450	NW_004457319.1	80187	84592	D	encoded by transcript ACA1_100450A; GTPase activation domain containing protein	join(80187..80212,80901..80990,81060..81252,81346..81465,81680..81842,81932..82140,82225..82560,82627..82799,82924..83128,83218..83310,83384..83627,83734..84131,84242..84592)	Acanthamoeba castellanii str. Neff	14913748
ACA1_100460	CDS	ACA1_100460	NW_004457319.1	86103	91204	R	encoded by transcript ACA1_100460A; ABC transporter	complement(join(86103..86123,86334..86492,86660..86887,86979..87161,87197..87693,87788..87913,87955..88176,88234..88440,88507..88651,88817..88903,88996..89349,89426..89564,89652..89835,89911..90020,90100..90641,90744..90873,90960..91087,91157..91204))	Acanthamoeba castellanii str. Neff	14913747
ACA1_100470	CDS	ACA1_100470	NW_004457319.1	91215	92274	R	encoded by transcript ACA1_100470A; uncharacterized protein	complement(join(91215..91328,91603..91704,91774..91887,91950..92073,92159..92274))	Acanthamoeba castellanii str. Neff	14913749
ACA1_100480	CDS	ACA1_100480	NW_004457319.1	92895	94961	R	encoded by transcript ACA1_100480A; Fbox/LRR-repeat protein	complement(join(92895..93559,93630..93704,93779..94004,94269..94388,94467..94586,94660..94767,94866..94961))	Acanthamoeba castellanii str. Neff	14913750
ACA1_100490	CDS	ACA1_100490	NW_004457319.1	95053	97871	D	encoded by transcript ACA1_100490A; Armadillo/betacatenin-like repeat domain containing protein	join(95053..95610,95699..95771,95893..96007,96095..96156,96300..96477,96835..96983,97070..97219,97302..97678,97782..97871)	Acanthamoeba castellanii str. Neff	14913751
ACA1_100500	CDS	ACA1_100500	NW_004457319.1	97979	100079	R	encoded by transcript ACA1_100500A; KOW motif domain containing protein	complement(join(97979..98187,98330..99050,99185..99305,99404..99544,99663..99861,99995..100079))	Acanthamoeba castellanii str. Neff	14913714
ACA1_100510	CDS	ACA1_100510	NW_004457319.1	100564	101705	D	encoded by transcript ACA1_100510A; flavinnucleotide-binding protein	join(100564..100602,100677..100838,100917..100979,101063..101151,101234..101289,101376..101428,101493..101705)	Acanthamoeba castellanii str. Neff	14913715
ACA1_100520	CDS	ACA1_100520	NW_004457319.1	101800	102510	D	encoded by transcript ACA1_100520A; uncharacterized protein	join(101800..101911,102037..102267,102446..102510)	Acanthamoeba castellanii str. Neff	14913716
ACA1_100530	CDS	ACA1_100530	NW_004457319.1	102963	103490	D	encoded by transcript ACA1_100530A; uncharacterized protein	102963..103490	Acanthamoeba castellanii str. Neff	14913717
ACA1_100540	CDS	ACA1_100540	NW_004457319.1	103705	109351	R	encoded by transcript ACA1_100540A; serine/threonine kinase	complement(join(103705..106080,106208..106453,106487..107717,107841..109351))	Acanthamoeba castellanii str. Neff	14913718
ACA1_100550	CDS	ACA1_100550	NW_004457319.1	110234	112182	D	encoded by transcript ACA1_100550A; uncharacterized protein	join(110234..110437,110518..112182)	Acanthamoeba castellanii str. Neff	14913719
ACA1_100560	CDS	ACA1_100560	NW_004457319.1	112718	114706	D	encoded by transcript ACA1_100560A; uncharacterized protein	join(112718..112928,113060..113230,113317..113781,113867..114016,114094..114265,114373..114503,114582..114706)	Acanthamoeba castellanii str. Neff	14913720
ACA1_100570	CDS	ACA1_100570	NW_004457319.1	114798	116202	R	encoded by transcript ACA1_100570A; asparaginase/glutaminase	complement(join(114798..114999,115092..115170,115233..115530,115602..115772,115846..116202))	Acanthamoeba castellanii str. Neff	14913721
ACA1_100580	CDS	ACA1_100580	NW_004457319.1	119458	120063	R	encoded by transcript ACA1_100580A; translation initiation inhibitor, putative	complement(119458..120063)	Acanthamoeba castellanii str. Neff	14913722
ACA1_100590	CDS	ACA1_100590	NW_004457319.1	120583	125800	D	encoded by transcript ACA1_100590A; serine/threonine kinase	join(120583..121010,121114..123220,123306..123434,123515..125800)	Acanthamoeba castellanii str. Neff	14913723
ACA1_100600	CDS	ACA1_100600	NW_004457319.1	126065	127799	D	encoded by transcript ACA1_100600A; uncharacterized protein	join(126065..126083,126244..126366,126483..126611,126764..126904,127029..127174,127271..127384,127463..127558,127644..127799)	Acanthamoeba castellanii str. Neff	14913725
ACA1_100610	CDS	ACA1_100610	NW_004457319.1	129042	134365	R	encoded by transcript ACA1_100610A; serine/threonine kinase	complement(join(129042..129276,129365..131436,131517..131645,131729..133838,133938..134365))	Acanthamoeba castellanii str. Neff	14913726
ACA1_100620	CDS	ACA1_100620	NW_004457319.1	134894	135499	D	encoded by transcript ACA1_100620A; translation initiation inhibitor, putative	134894..135499	Acanthamoeba castellanii str. Neff	14913727
ACA1_100630	CDS	ACA1_100630	NW_004457319.1	136181	137016	D	encoded by transcript ACA1_100630A; uncharacterized protein	join(136181..136473,136567..136609,136654..136728,136879..137016)	Acanthamoeba castellanii str. Neff	14913728
ACA1_100640	CDS	ACA1_100640	NW_004457319.1	137192	138701	D	encoded by transcript ACA1_100640A; Synapsin, putative	join(137192..137361,137439..137573,137663..137745,137811..137910,138007..138017,138117..138198,138258..138382,138478..138701)	Acanthamoeba castellanii str. Neff	14913729
ACA1_100650	CDS	ACA1_100650	NW_004457319.1	138830	140209	D	encoded by transcript ACA1_100650A; zinc finger, C3HC4 type (RING finger) domain containing protein	138830..140209	Acanthamoeba castellanii str. Neff	14913730
ACA1_100660	CDS	ACA1_100660	NW_004457319.1	140806	147335	D	encoded by transcript ACA1_100660A; serine/threonine kinase	join(140806..140860,140965..141067,141122..141203,141296..141433,141500..141808,141900..142213,142294..142643,142713..142954,143061..143162,143256..143397,143481..143876,143940..144199,144267..144383,144459..144555,144656..145948,146016..146223,146301..146557,146645..146850,146937..147335)	Acanthamoeba castellanii str. Neff	14913731
ACA1_100670	CDS	ACA1_100670	NW_004457319.1	147713	148395	D	encoded by transcript ACA1_100670A; uncharacterized protein	join(147713..147761,147873..147979,148090..148395)	Acanthamoeba castellanii str. Neff	14913732
ACA1_314850	CDS	ACA1_314850	NW_004457318.1	10412	11359	R	encoded by transcript ACA1_314850A; aflatoxin B1 aldehyde reductase member 2, putative	complement(join(<10412..10525,10605..10687,10748..11189,11339..11359))	Acanthamoeba castellanii str. Neff	14913713
ACA1_314860	CDS	ACA1_314860	NW_004457318.1	11630	12162	R	encoded by transcript ACA1_314860A; uncharacterized protein	complement(join(11630..11980,12052..12162))	Acanthamoeba castellanii str. Neff	14913712
ACA1_118490	CDS	ACA1_118490	NW_004457317.1	93	1031	D	encoded by transcript ACA1_118490A; Nad dependent epimerase/dehydratase	join(<93..241,333..417,498..546,660..747,849..975,1023..1031)	Acanthamoeba castellanii str. Neff	14913711
ACA1_118600	CDS	ACA1_118600	NW_004457317.1	7293	8923	D	encoded by transcript ACA1_118600A; NAD dependent epimerase/dehydratase family	join(7293..7412,7728..7876,7968..8052,8134..8182,8282..8369,8481..8607,8680..8799,8876..8923)	Acanthamoeba castellanii str. Neff	14913700
ACA1_118710	CDS	ACA1_118710	NW_004457317.1	9013	10742	R	encoded by transcript ACA1_118710A; tetratricopeptide repeat domain containing protein	complement(join(9013..9219,9292..9476,9570..9722,9811..9977,10193..10363,10432..10742))	Acanthamoeba castellanii str. Neff	14913701
ACA1_118720	CDS	ACA1_118720	NW_004457317.1	10925	12971	R	encoded by transcript ACA1_118720A; uncharacterized protein	complement(join(10925..11171,11310..11479,11574..11623,11651..11754,11828..11922,11988..12035,12094..12245,12380..12457,12551..12971))	Acanthamoeba castellanii str. Neff	14913702
ACA1_118730	CDS	ACA1_118730	NW_004457317.1	13180	14817	D	encoded by transcript ACA1_118730A; uncharacterized protein	join(13180..13407,13496..13769,13909..14456,14542..14697,14752..14817)	Acanthamoeba castellanii str. Neff	14913703
ACA1_118740	CDS	ACA1_118740	NW_004457317.1	14946	17315	R	encoded by transcript ACA1_118740A; betalactamase	complement(join(14946..15132,15241..15387,15485..15621,15763..15826,15845..15913,16020..16118,16256..16397,16499..16669,16769..16805,16891..16977,17148..17315))	Acanthamoeba castellanii str. Neff	14913706
ACA1_118750	CDS	ACA1_118750	NW_004457317.1	17560	19216	R	encoded by transcript ACA1_118750A; YwlC, putative	complement(join(17560..17646,17730..18436,18545..18638,18715..18859,18957..19017,19099..19216))	Acanthamoeba castellanii str. Neff	14913707
ACA1_118760	CDS	ACA1_118760	NW_004457317.1	19889	27961	D	encoded by transcript ACA1_118760A; HEAT repeat domain containing protein	join(19889..20512,20728..22264,22367..22648,22746..23237,23308..23402,23503..23607,23709..24079,24208..24708,24802..25127,25231..25362,25449..25528,25637..25722,25803..25966,26035..26158,26246..26358,26463..26610,26743..27961)	Acanthamoeba castellanii str. Neff	14913708
ACA1_118770	CDS	ACA1_118770	NW_004457317.1	28168	29855	R	encoded by transcript ACA1_118770A; transmembrane protein 144 family protein	complement(join(28168..28352,28564..28653,28727..28846,28992..29165,29260..29353,29434..29500,29587..29855))	Acanthamoeba castellanii str. Neff	14913709
ACA1_118780	CDS	ACA1_118780	NW_004457317.1	30863	32765	R	encoded by transcript ACA1_118780A; uncharacterized protein	complement(join(30863..31618,31690..32487,32546..32649,32720..32765))	Acanthamoeba castellanii str. Neff	14913710
ACA1_118790	CDS	ACA1_118790	NW_004457317.1	32844	33641	R	encoded by transcript ACA1_118790A; uncharacterized protein	complement(join(32844..33395,33486..33641))	Acanthamoeba castellanii str. Neff	14913704
ACA1_118800	CDS	ACA1_118800	NW_004457317.1	34490	34951	D	encoded by transcript ACA1_118800A; uncharacterized protein	34490..>34951	Acanthamoeba castellanii str. Neff	14913705
ACA1_349320	CDS	ACA1_349320	NW_004457316.1	184	544	D	encoded by transcript ACA1_349320A; ankyrin repeat-containing protein	join(184..374,448..544)	Acanthamoeba castellanii str. Neff	14913676
ACA1_349340	CDS	ACA1_349340	NW_004457316.1	2764	4949	R	encoded by transcript ACA1_349340A; uncharacterized protein	complement(join(2764..2900,2997..3120,3224..3352,3479..3692,3793..3883,3971..4057,4159..4582,4656..4778,4881..4949))	Acanthamoeba castellanii str. Neff	14913691
ACA1_349450	CDS	ACA1_349450	NW_004457316.1	7675	8125	R	encoded by transcript ACA1_349450A; uncharacterized protein	complement(join(7675..7935,8072..8125))	Acanthamoeba castellanii str. Neff	14913692
ACA1_349460	CDS	ACA1_349460	NW_004457316.1	8657	9514	R	encoded by transcript ACA1_349460A; uncharacterized protein	complement(join(8657..8701,8779..8903,8991..9083,9174..9207,9338..9514))	Acanthamoeba castellanii str. Neff	14913693
ACA1_349470	CDS	ACA1_349470	NW_004457316.1	9794	10494	R	encoded by transcript ACA1_349470A; uncharacterized protein	complement(join(9794..9901,10033..10078,10373..10494))	Acanthamoeba castellanii str. Neff	14913694
ACA1_349480	CDS	ACA1_349480	NW_004457316.1	10709	13317	R	encoded by transcript ACA1_349480A; inorganic anion transporter, sulfate permease (SulP) subfamily protein	complement(join(10709..10756,10841..11034,11126..11246,11383..11583,11724..12044,12173..12405,12497..12670,12777..12933,13240..13317))	Acanthamoeba castellanii str. Neff	14913695
ACA1_349490	CDS	ACA1_349490	NW_004457316.1	13427	14197	R	encoded by transcript ACA1_349490A; uncharacterized protein	complement(13427..14197)	Acanthamoeba castellanii str. Neff	14913696
ACA1_349500	CDS	ACA1_349500	NW_004457316.1	14456	15030	R	encoded by transcript ACA1_349500A; uncharacterized protein	complement(join(14456..14677,14803..14875,14957..15030))	Acanthamoeba castellanii str. Neff	14913697
ACA1_349510	CDS	ACA1_349510	NW_004457316.1	15491	18007	R	encoded by transcript ACA1_349510A; regulator of chromosome condensation (RCC1) repeat domain containing protein	complement(join(15491..15599,15661..15751,15827..15917,16000..16079,16155..16224,16316..16389,16466..16600,16675..16762,16844..16939,17028..17113,17236..17370,17449..17623,17685..17861,17987..18007))	Acanthamoeba castellanii str. Neff	14913698
ACA1_349520	CDS	ACA1_349520	NW_004457316.1	18232	18918	D	encoded by transcript ACA1_349520A; uncharacterized protein	18232..18918	Acanthamoeba castellanii str. Neff	14913699
ACA1_349630	CDS	ACA1_349630	NW_004457316.1	20281	21218	R	encoded by transcript ACA1_349630A; cellulose synthase	complement(join(<20281..20675,20787..>21218))	Acanthamoeba castellanii str. Neff	14913677
ACA1_349640	CDS	ACA1_349640	NW_004457316.1	21401	24676	D	encoded by transcript ACA1_349640A; HEAT repeat domain containing protein	join(21401..21628,21644..21715,21811..21914,22011..22082,22120..22206,22267..22395,22517..22625,22704..22855,22886..22949,23083..23180,23375..23441,23528..23635,23756..23912,23997..24676)	Acanthamoeba castellanii str. Neff	14913678
ACA1_349650	CDS	ACA1_349650	NW_004457316.1	24837	29277	R	encoded by transcript ACA1_349650A; cellulose synthase (udp-forming), putative	complement(join(<24837..25466,25552..27411,27477..28511,28612..28766,28878..29277))	Acanthamoeba castellanii str. Neff	14913679
ACA1_349660	CDS	ACA1_349660	NW_004457316.1	30031	32454	D	encoded by transcript ACA1_349660A; BAT1 protein	join(30031..30140,30258..30548,30651..30871,30959..31077,31714..31955,32043..32454)	Acanthamoeba castellanii str. Neff	14913680
ACA1_349670	CDS	ACA1_349670	NW_004457316.1	32629	35025	R	encoded by transcript ACA1_349670A; uncharacterized protein	complement(join(32629..32729,32833..32924,32938..33001,34182..34349,34445..34494,34589..35025))	Acanthamoeba castellanii str. Neff	14913681
ACA1_349780	CDS	ACA1_349780	NW_004457316.1	35414	36255	D	encoded by transcript ACA1_349780A; uncharacterized protein	join(35414..35873,35955..36039,36126..36255)	Acanthamoeba castellanii str. Neff	14913682
ACA1_349790	CDS	ACA1_349790	NW_004457316.1	36337	37114	D	encoded by transcript ACA1_349790A; uncharacterized protein	join(36337..36398,36612..36684,36752..37114)	Acanthamoeba castellanii str. Neff	14913683
ACA1_349800	CDS	ACA1_349800	NW_004457316.1	37338	39045	D	encoded by transcript ACA1_349800A; timeless protein	join(37338..37467,37527..37685,37773..38083,38171..38467,38707..38860,39008..39045)	Acanthamoeba castellanii str. Neff	14913684
ACA1_349810	CDS	ACA1_349810	NW_004457316.1	39331	39884	D	encoded by transcript ACA1_349810A; uncharacterized protein	join(39331..39450,39496..39627,39714..39884)	Acanthamoeba castellanii str. Neff	14913685
ACA1_349820	CDS	ACA1_349820	NW_004457316.1	39968	42707	D	encoded by transcript ACA1_349820A; uncharacterized protein	join(39968..40061,40167..40335,40413..40496,40583..40842,40934..41075,41155..41209,41344..41448,41538..41767,41840..42071,42147..42707)	Acanthamoeba castellanii str. Neff	14913686
ACA1_349830	CDS	ACA1_349830	NW_004457316.1	42800	45554	R	encoded by transcript ACA1_349830A; HECTdomain (ubiquitin-transferase) domain containing protein	complement(join(42800..43295,43403..43632,43734..43936,44050..44358,44427..44574,44795..45066,45182..45554))	Acanthamoeba castellanii str. Neff	14913687
ACA1_349840	CDS	ACA1_349840	NW_004457316.1	45653	47593	R	encoded by transcript ACA1_349840A; uncharacterized protein	complement(join(45653..45982,46092..46568,46660..46783,46847..46974,47061..47205,47279..47461,47556..47593))	Acanthamoeba castellanii str. Neff	14913688
ACA1_350050	CDS	ACA1_350050	NW_004457316.1	51892	54479	R	encoded by transcript ACA1_350050A; uncharacterized protein	complement(join(51892..51999,52073..52343,52452..53025,53142..53916,53966..54307,54390..54479))	Acanthamoeba castellanii str. Neff	14913689
ACA1_301360	CDS	ACA1_301360	NW_004457315.1	580	1285	R	encoded by transcript ACA1_301360A; uncharacterized protein	complement(join(580..1091,1102..1285))	Acanthamoeba castellanii str. Neff	14913675
ACA1_301370	CDS	ACA1_301370	NW_004457315.1	2070	2973	R	encoded by transcript ACA1_301370A; uncharacterized protein	complement(join(2070..2585,2734..2973))	Acanthamoeba castellanii str. Neff	14913668
ACA1_301380	CDS	ACA1_301380	NW_004457315.1	3085	3414	R	encoded by transcript ACA1_301380A; uncharacterized protein	complement(3085..3414)	Acanthamoeba castellanii str. Neff	14913670
ACA1_301390	CDS	ACA1_301390	NW_004457315.1	3570	4463	R	encoded by transcript ACA1_301390A; uncharacterized protein	complement(3570..4463)	Acanthamoeba castellanii str. Neff	14913669
ACA1_301400	CDS	ACA1_301400	NW_004457315.1	5199	6585	D	encoded by transcript ACA1_301400A; uncharacterized protein	join(5199..5408,5446..6585)	Acanthamoeba castellanii str. Neff	14913672
ACA1_301410	CDS	ACA1_301410	NW_004457315.1	8893	9504	R	encoded by transcript ACA1_301410A; uncharacterized protein	complement(join(8893..8916,9247..9504))	Acanthamoeba castellanii str. Neff	14913673
ACA1_301420	CDS	ACA1_301420	NW_004457315.1	9772	10089	D	encoded by transcript ACA1_301420A; uncharacterized protein	<9772..>10089	Acanthamoeba castellanii str. Neff	14913674
ACA1_301430	CDS	ACA1_301430	NW_004457315.1	12536	13297	D	encoded by transcript ACA1_301430A; uncharacterized protein	12536..13297	Acanthamoeba castellanii str. Neff	14913671
ACA1_021690	CDS	ACA1_021690	NW_004457314.1	46	3047	R	encoded by transcript ACA1_021690A; Vesicle docking family protein	complement(join(<46..121,195..331,443..521,605..697,787..917,1029..1130,1226..1309,1391..1495,1598..1660,1760..1840,1939..2045,2138..2216,2306..2479,2615..2722,2874..3047))	Acanthamoeba castellanii str. Neff	14913667
ACA1_021810	CDS	ACA1_021810	NW_004457314.1	14128	14894	R	encoded by transcript ACA1_021810A; uncharacterized protein	complement(join(<14128..14481,14580..>14894))	Acanthamoeba castellanii str. Neff	14913665
ACA1_090750	CDS	ACA1_090750	NW_004457313.1	23	259	D	encoded by transcript ACA1_090750A; ribonucleotide reductase, putative	23..>259	Acanthamoeba castellanii str. Neff	14913223
ACA1_090760	CDS	ACA1_090760	NW_004457313.1	2022	3029	R	encoded by transcript ACA1_090760A; uncharacterized protein	complement(2022..>3029)	Acanthamoeba castellanii str. Neff	14913504
ACA1_090770	CDS	ACA1_090770	NW_004457313.1	3289	4037	D	encoded by transcript ACA1_090770A; uncharacterized protein	join(3289..3460,3511..4037)	Acanthamoeba castellanii str. Neff	14913337
ACA1_090780	CDS	ACA1_090780	NW_004457313.1	4513	5821	D	encoded by transcript ACA1_090780A; uncharacterized protein	join(4513..4730,4750..5821)	Acanthamoeba castellanii str. Neff	14913338
ACA1_090790	CDS	ACA1_090790	NW_004457313.1	5890	6734	D	encoded by transcript ACA1_090790A; uncharacterized protein	join(5890..6252,6267..6734)	Acanthamoeba castellanii str. Neff	14913209
ACA1_090800	CDS	ACA1_090800	NW_004457313.1	6942	7851	R	encoded by transcript ACA1_090800A; K+ channel tetramerization subfamily protein	complement(join(6942..7141,7347..7851))	Acanthamoeba castellanii str. Neff	14913210
ACA1_090810	CDS	ACA1_090810	NW_004457313.1	8292	8897	R	encoded by transcript ACA1_090810A; uncharacterized protein	complement(8292..8897)	Acanthamoeba castellanii str. Neff	14913367
ACA1_090820	CDS	ACA1_090820	NW_004457313.1	9440	10506	R	encoded by transcript ACA1_090820A; uncharacterized protein	complement(join(9440..9929,10133..10251,10372..10506))	Acanthamoeba castellanii str. Neff	14913368
ACA1_090830	CDS	ACA1_090830	NW_004457313.1	10954	12036	D	encoded by transcript ACA1_090830A; serine/threonine kinase	10954..12036	Acanthamoeba castellanii str. Neff	14913369
ACA1_090840	CDS	ACA1_090840	NW_004457313.1	16440	18031	R	encoded by transcript ACA1_090840A; ABC transporter family protein	complement(join(16440..16736,17726..18031))	Acanthamoeba castellanii str. Neff	14913370
ACA1_090950	CDS	ACA1_090950	NW_004457313.1	18265	22512	R	encoded by transcript ACA1_090950A; uncharacterized protein	complement(join(18265..18339,18463..18670,18754..19187,19215..19262,19359..19492,19578..19762,19855..20025,20125..20229,20324..20380,20548..20617,20719..21155,21266..22512))	Acanthamoeba castellanii str. Neff	14913572
ACA1_090960	CDS	ACA1_090960	NW_004457313.1	23065	24914	R	encoded by transcript ACA1_090960A; protein kinase	complement(join(23065..23264,23355..23490,23586..23657,23729..24009,24131..24251,24360..24478,24672..24753,24843..24914))	Acanthamoeba castellanii str. Neff	14913573
ACA1_090980	CDS	ACA1_090980	NW_004457313.1	32302	37512	R	encoded by transcript ACA1_090980A; leucine rich repeat domain containing protein	complement(join(32302..32474,32570..32676,32788..32848,32920..33031,33119..33222,33317..33415,33598..33658,33741..33830,33923..34015,34103..34168,34294..34325,34403..34496,34565..34643,34723..34808,34914..35113,35194..35280,35384..35469,35638..36115,36183..36245,36315..36430,36522..36621,36723..36786,36915..37096,37188..37296,37381..37512))	Acanthamoeba castellanii str. Neff	14913349
ACA1_090990	CDS	ACA1_090990	NW_004457313.1	37670	38592	R	encoded by transcript ACA1_090990A; nuclear protein SET, putative	complement(join(37670..37812,37895..38027,38060..38146,38244..38341,38451..38592))	Acanthamoeba castellanii str. Neff	14913350
ACA1_091000	CDS	ACA1_091000	NW_004457313.1	39154	40153	R	encoded by transcript ACA1_091000A; uncharacterized protein	complement(join(39154..39185,39334..40153))	Acanthamoeba castellanii str. Neff	14913639
ACA1_091010	CDS	ACA1_091010	NW_004457313.1	40157	41555	R	encoded by transcript ACA1_091010A; cudA family protein	complement(join(40157..41324,41341..41555))	Acanthamoeba castellanii str. Neff	14913640
ACA1_091020	CDS	ACA1_091020	NW_004457313.1	43308	44582	D	encoded by transcript ACA1_091020A; uncharacterized protein	join(43308..43338,43565..43627,43710..43762,44040..44366,44427..44582)	Acanthamoeba castellanii str. Neff	14913641
ACA1_091030	CDS	ACA1_091030	NW_004457313.1	44586	45026	D	encoded by transcript ACA1_091030A; uncharacterized protein	join(44586..44846,45012..45026)	Acanthamoeba castellanii str. Neff	14913642
ACA1_091040	CDS	ACA1_091040	NW_004457313.1	45115	47317	R	encoded by transcript ACA1_091040A; allantoinase	complement(join(45115..45380,45467..45578,45655..45751,45843..46034,46123..46306,46442..46615,46682..46758,46851..46974,47037..47131,47223..47317))	Acanthamoeba castellanii str. Neff	14913446
ACA1_091050	CDS	ACA1_091050	NW_004457313.1	47607	49763	D	encoded by transcript ACA1_091050A; ankyrin repeat-containing protein	join(47607..47886,47952..48016,48083..48193,48263..48406,48452..48622,48714..48838,48905..48981,49056..49186,49263..49356,49434..49570,49707..49763)	Acanthamoeba castellanii str. Neff	14913447
ACA1_091060	CDS	ACA1_091060	NW_004457313.1	49919	51039	D	encoded by transcript ACA1_091060A; methyltransferase type 11, putative	join(49919..49980,50045..50214,50280..50395,50470..50599,50699..51039)	Acanthamoeba castellanii str. Neff	14913351
ACA1_091070	CDS	ACA1_091070	NW_004457313.1	51099	54450	R	encoded by transcript ACA1_091070A; urocanate hydratase	complement(join(51099..51209,51283..51376,51476..51585,51652..51727,51799..51920,52021..52175,52239..52363,52443..52535,52608..52723,52830..52883,52959..53083,53178..53271,53369..53460,53554..53699,53771..53854,53941..54046,54129..54450))	Acanthamoeba castellanii str. Neff	14913352
ACA1_091080	CDS	ACA1_091080	NW_004457313.1	54724	55451	R	encoded by transcript ACA1_091080A; uncharacterized protein	complement(join(54724..55212,55286..55323,55400..55451))	Acanthamoeba castellanii str. Neff	14913353
ACA1_091090	CDS	ACA1_091090	NW_004457313.1	55730	57664	R	encoded by transcript ACA1_091090A; acylCoA dehydrogenase family protein	complement(join(55730..55803,55884..55946,56018..56133,56205..56364,56434..56542,56610..56686,56759..56828,56922..57047,57137..57250,57333..57473,57554..57664))	Acanthamoeba castellanii str. Neff	14913596
ACA1_091100	CDS	ACA1_091100	NW_004457313.1	57976	58551	D	encoded by transcript ACA1_091100A; uncharacterized protein	join(57976..58104,58189..58264,58397..58551)	Acanthamoeba castellanii str. Neff	14913597
ACA1_091110	CDS	ACA1_091110	NW_004457313.1	58639	61009	D	encoded by transcript ACA1_091110A; uncharacterized protein	join(58639..59067,59314..59413,59675..59714,59827..59957,60197..60283,60346..60460,60537..60807,60890..61009)	Acanthamoeba castellanii str. Neff	14913401
ACA1_091120	CDS	ACA1_091120	NW_004457313.1	61091	62761	D	encoded by transcript ACA1_091120A; Fbox domain containing protein	join(61091..61279,61368..61430,61509..61681,61734..62181,62274..62398,62451..62596,62688..62761)	Acanthamoeba castellanii str. Neff	14913402
ACA1_091130	CDS	ACA1_091130	NW_004457313.1	63176	65218	R	encoded by transcript ACA1_091130A; uncharacterized protein	complement(join(63176..63924,63987..64085,64148..64220,64279..64356,64684..64904,64999..65218))	Acanthamoeba castellanii str. Neff	14913403
ACA1_091140	CDS	ACA1_091140	NW_004457313.1	65445	67558	R	encoded by transcript ACA1_091140A; BTB/POZ domain containing protein	complement(join(65445..65620,65692..66200,66315..66507,66610..66763,66864..67259,67454..67558))	Acanthamoeba castellanii str. Neff	14913438
ACA1_091150	CDS	ACA1_091150	NW_004457313.1	67928	69448	D	encoded by transcript ACA1_091150A; uncharacterized protein	67928..69448	Acanthamoeba castellanii str. Neff	14913439
ACA1_091160	CDS	ACA1_091160	NW_004457313.1	69556	74008	R	encoded by transcript ACA1_091160A; phospholipase D, putative	complement(join(69556..70097,70192..70281,70367..70472,70578..70689,70777..70874,70953..71072,71159..71326,71427..71504,71697..71855,71929..72066,72175..72572,72646..72992,73309..73460,73564..73741,73890..74008))	Acanthamoeba castellanii str. Neff	14913440
ACA1_091270	CDS	ACA1_091270	NW_004457313.1	74290	75644	D	encoded by transcript ACA1_091270A; casein kinase ii subunit alpha, putative	join(74290..74432,74516..74840,74939..75187,75251..75399,75470..75644)	Acanthamoeba castellanii str. Neff	14913387
ACA1_091280	CDS	ACA1_091280	NW_004457313.1	76674	76958	D	encoded by transcript ACA1_091280A; uncharacterized protein	join(76674..76696,76793..76958)	Acanthamoeba castellanii str. Neff	14913388
ACA1_091290	CDS	ACA1_091290	NW_004457313.1	77607	78075	R	encoded by transcript ACA1_091290A; golgi transport 1 A family protein	complement(join(77607..77755,77848..77881,77932..78075))	Acanthamoeba castellanii str. Neff	14913239
ACA1_091300	CDS	ACA1_091300	NW_004457313.1	78568	81546	R	encoded by transcript ACA1_091300A; RhoGAP domain containing protein	complement(join(78568..78713,78810..78918,78992..79290,79360..79545,79718..79822,79891..79975,80048..80167,80239..80433,80586..80677,80853..81117,81241..81546))	Acanthamoeba castellanii str. Neff	14913240
ACA1_091310	CDS	ACA1_091310	NW_004457313.1	81709	84977	D	encoded by transcript ACA1_091310A; spindle pole body interacting protein	join(81709..81824,81905..81947,82029..82076,82160..82203,82284..82404,82491..82568,82692..82796,82879..83264,83356..83460,83566..83730,83818..83971,84066..84196,84277..84351,84452..84602,84686..84808,84951..84977)	Acanthamoeba castellanii str. Neff	14913241
ACA1_091320	CDS	ACA1_091320	NW_004457313.1	85735	88668	D	encoded by transcript ACA1_091320A; Protein kinase 3	join(85735..85967,86185..86445,86520..86668,86824..87077,87178..87342,87387..87490,87632..87786,87850..88076,88173..88373,88480..88668)	Acanthamoeba castellanii str. Neff	14913335
ACA1_091330	CDS	ACA1_091330	NW_004457313.1	88809	91124	R	encoded by transcript ACA1_091330A; pyruvate kinase, barrel domain containing protein	complement(join(88809..88949,89044..89209,89286..89467,89580..89720,89792..90103,90193..90528,90678..90848,90999..91124))	Acanthamoeba castellanii str. Neff	14913336
ACA1_091340	CDS	ACA1_091340	NW_004457313.1	91696	94537	D	encoded by transcript ACA1_091340A; DENN (AEX3) domain containing protein	join(91696..92053,92169..92491,92657..92744,92877..93112,93202..93307,93408..93748,93831..94084,94190..94393,94474..94537)	Acanthamoeba castellanii str. Neff	14913637
ACA1_091350	CDS	ACA1_091350	NW_004457313.1	94654	95388	R	encoded by transcript ACA1_091350A; mediator of rna polymerase ii transcription, putative	complement(94654..95388)	Acanthamoeba castellanii str. Neff	14913638
ACA1_091360	CDS	ACA1_091360	NW_004457313.1	95464	95976	D	encoded by transcript ACA1_091360A; uncharacterized protein	95464..95976	Acanthamoeba castellanii str. Neff	14913548
ACA1_091370	CDS	ACA1_091370	NW_004457313.1	96052	96985	R	encoded by transcript ACA1_091370A; uncharacterized protein	complement(join(96052..96105,96171..96251,96326..96478,96495..96568,96599..96712,96790..96985))	Acanthamoeba castellanii str. Neff	14913549
ACA1_091380	CDS	ACA1_091380	NW_004457313.1	97253	105361	R	encoded by transcript ACA1_091380A; S1 RNA binding domain containing protein	complement(join(97253..97581,97689..97845,97945..98181,98271..99118,99199..99430,99511..99810,99860..99948,100041..100173,100256..100438,100514..100590,100680..100784,100869..100947,101028..101402,101502..101927,102004..102294,102373..102438,102508..102681,102738..102878,102963..103112,103210..103392,103471..103680,103756..103881,103956..104143,104225..104333,104413..104583,104679..104834,105086..105361))	Acanthamoeba castellanii str. Neff	14913550
ACA1_091390	CDS	ACA1_091390	NW_004457313.1	105782	106659	D	encoded by transcript ACA1_091390A; Ras family GTPase	join(105782..105815,105939..106015,106080..106149,106244..106659)	Acanthamoeba castellanii str. Neff	14913551
ACA1_091400	CDS	ACA1_091400	NW_004457313.1	107119	107730	D	encoded by transcript ACA1_091400A; uncharacterized protein	join(107119..107126,107176..107252,107327..107462,107541..107730)	Acanthamoeba castellanii str. Neff	14913311
ACA1_091410	CDS	ACA1_091410	NW_004457313.1	107948	115271	R	encoded by transcript ACA1_091410A; nucleoporin, putative	complement(join(107948..108030,108112..108487,108599..108808,108883..109381,109464..109597,109686..109919,109999..110169,110242..110573,110658..110828,110891..111170,111253..111332,111400..111655,111715..111876,111952..112039,112113..112246,112319..112551,112631..112826,112887..112970,113035..113246,113315..113477,113540..113824,113887..114021,114089..114259,114327..114469,114541..114760,114846..114982,115049..115271))	Acanthamoeba castellanii str. Neff	14913354
ACA1_091420	CDS	ACA1_091420	NW_004457313.1	115745	118256	D	encoded by transcript ACA1_091420A; tetratricopeptide repeat domain containing protein	join(115745..115828,115897..116004,116065..116383,116439..116553,116649..116852,116927..117060,117296..117487,117548..117693,117751..117842,117896..118256)	Acanthamoeba castellanii str. Neff	14913355
ACA1_091430	CDS	ACA1_091430	NW_004457313.1	118534	123549	D	encoded by transcript ACA1_091430A; Znfinger in Ran binding protein and others domain containing protein	118534..123549	Acanthamoeba castellanii str. Neff	14913191
ACA1_091440	CDS	ACA1_091440	NW_004457313.1	123848	125160	D	encoded by transcript ACA1_091440A; uncharacterized protein	join(123848..123919,123995..124093,124167..124250,124325..124687,124774..124904,125025..125160)	Acanthamoeba castellanii str. Neff	14913192
ACA1_091450	CDS	ACA1_091450	NW_004457313.1	125492	127162	D	encoded by transcript ACA1_091450A; Omethyltransferase	join(125492..125507,125587..125660,125733..125855,125938..126053,126133..126244,126319..126431,126510..126729,126816..126915,126984..127162)	Acanthamoeba castellanii str. Neff	14913193
ACA1_091460	CDS	ACA1_091460	NW_004457313.1	127195	127559	R	encoded by transcript ACA1_091460A; uncharacterized protein	complement(join(127195..127347,127452..127559))	Acanthamoeba castellanii str. Neff	14913157
ACA1_091470	CDS	ACA1_091470	NW_004457313.1	127639	129505	R	encoded by transcript ACA1_091470A; uncharacterized protein	complement(join(127639..127675,127787..127830,127863..128009,128114..128205,128272..128462,128565..128650,128743..128879,128979..129166,129228..129323,129384..129505))	Acanthamoeba castellanii str. Neff	14913158
ACA1_091480	CDS	ACA1_091480	NW_004457313.1	129666	130998	R	encoded by transcript ACA1_091480A; Polyprotein	complement(join(129666..129755,129871..129930,130135..130236,130300..130370,130438..130549,130632..130784,130850..130881,130950..130998))	Acanthamoeba castellanii str. Neff	14913519
ACA1_091490	CDS	ACA1_091490	NW_004457313.1	131433	133342	D	encoded by transcript ACA1_091490A; RhoGAP domain containing protein	join(131433..131655,131734..131814,131901..132029,132099..132208,132278..132814,132910..133089,133217..133342)	Acanthamoeba castellanii str. Neff	14913520
ACA1_091500	CDS	ACA1_091500	NW_004457313.1	133744	134664	D	encoded by transcript ACA1_091500A; RSNARE, VAMP72-family	join(133744..133892,134003..134183,134273..134524,134611..134664)	Acanthamoeba castellanii str. Neff	14913521
ACA1_091510	CDS	ACA1_091510	NW_004457313.1	134965	135606	D	encoded by transcript ACA1_091510A; uncharacterized protein	134965..135606	Acanthamoeba castellanii str. Neff	14913110
ACA1_091520	CDS	ACA1_091520	NW_004457313.1	135699	138578	R	encoded by transcript ACA1_091520A; uncharacterized protein	complement(join(135699..136020,136109..136186,136284..136398,136475..136609,136725..136839,136919..137075,137173..137608,137713..137773,137839..137931,138029..138100,138202..138329,138398..138578))	Acanthamoeba castellanii str. Neff	14913111
ACA1_091530	CDS	ACA1_091530	NW_004457313.1	138847	139900	D	encoded by transcript ACA1_091530A; Phospholipid methyltransferase	join(138847..139067,139157..139274,139356..139495,139603..139677,139774..139900)	Acanthamoeba castellanii str. Neff	14913112
ACA1_091540	CDS	ACA1_091540	NW_004457313.1	140034	140969	R	encoded by transcript ACA1_091540A; GM2activator protein	complement(join(140034..140123,140212..140314,140404..140617,140648..140745,140824..140969))	Acanthamoeba castellanii str. Neff	14913621
ACA1_091550	CDS	ACA1_091550	NW_004457313.1	141544	146567	D	encoded by transcript ACA1_091550A; Fbox domain containing protein	join(141544..141938,142218..142358,142461..143020,143141..143820,143928..144004,144119..144269,144345..144469,144547..144747,144847..144992,145040..145221,145315..145478,145581..145728,145845..146567)	Acanthamoeba castellanii str. Neff	14913622
ACA1_091560	CDS	ACA1_091560	NW_004457313.1	148985	151382	D	encoded by transcript ACA1_091560A; ADPribosylglycohydrolase superfamily protein	join(148985..149016,149098..149168,149224..149389,149459..149513,149603..149699,149764..149958,150041..150152,150226..150319,150427..151025,151112..151382)	Acanthamoeba castellanii str. Neff	14913140
ACA1_091570	CDS	ACA1_091570	NW_004457313.1	151499	152751	D	encoded by transcript ACA1_091570A; superoxide dismutase (Mn), putative	join(151499..151618,151699..151851,152014..152139,152228..152344,152429..152554,152653..152751)	Acanthamoeba castellanii str. Neff	14913141
ACA1_091580	CDS	ACA1_091580	NW_004457313.1	152783	154552	R	encoded by transcript ACA1_091580A; uncharacterized protein	complement(join(152783..153319,153404..154552))	Acanthamoeba castellanii str. Neff	14913634
ACA1_091590	CDS	ACA1_091590	NW_004457313.1	154797	156800	R	encoded by transcript ACA1_091590A; Myblike DNA-binding domain containing protein	complement(join(<154797..155316,155427..155523,155666..155729,155829..156460,156587..156643,156753..156800))	Acanthamoeba castellanii str. Neff	14913635
ACA1_091600	CDS	ACA1_091600	NW_004457313.1	157196	163165	D	encoded by transcript ACA1_091600A; RhoGEF domain containing protein	join(157196..157394,157626..157751,157872..157988,158079..158312,158414..158536,158615..158694,158764..159043,159122..159223,159316..159496,159592..159743,159827..160050,160125..160181,160275..160379,160460..160612,160708..160797,160875..161097,161182..161333,161417..161494,161595..161733,161812..162014,162096..162177,162252..162410,162506..162669,162782..163165)	Acanthamoeba castellanii str. Neff	14913636
ACA1_091610	CDS	ACA1_091610	NW_004457313.1	163532	165149	R	encoded by transcript ACA1_091610A; uncharacterized protein	complement(join(163532..164734,164757..165149))	Acanthamoeba castellanii str. Neff	14913568
ACA1_091620	CDS	ACA1_091620	NW_004457313.1	165348	165858	D	encoded by transcript ACA1_091620A; antibiotic biosynthesis monooxygenase subfamily protein	join(165348..165462,165532..165653,165739..165858)	Acanthamoeba castellanii str. Neff	14913569
ACA1_091630	CDS	ACA1_091630	NW_004457313.1	166338	168030	R	encoded by transcript ACA1_091630A; linker histone H1 and H5 domain containing protein	complement(join(166338..166688,166762..166883,166959..168030))	Acanthamoeba castellanii str. Neff	14913453
ACA1_091640	CDS	ACA1_091640	NW_004457313.1	168387	169909	R	encoded by transcript ACA1_091640A; cytidylyltransferase	complement(join(168387..168450,168523..168617,168682..168765,168840..168952,169021..169078,169143..169207,169295..169417,169497..169653,169736..169909))	Acanthamoeba castellanii str. Neff	14913454
ACA1_091650	CDS	ACA1_091650	NW_004457313.1	170199	171083	R	encoded by transcript ACA1_091650A; uncharacterized protein	complement(join(170199..170371,170464..170845,170925..171083))	Acanthamoeba castellanii str. Neff	14913455
ACA1_091660	CDS	ACA1_091660	NW_004457313.1	171513	173879	R	encoded by transcript ACA1_091660A; uncharacterized protein	complement(join(171513..172112,172198..172468,172557..172683,172782..172923,172991..173128,173218..173547,173616..173879))	Acanthamoeba castellanii str. Neff	14913645
ACA1_091670	CDS	ACA1_091670	NW_004457313.1	174044	175447	R	encoded by transcript ACA1_091670A; ATP:L-methionine S-Adenosyltransferase	complement(join(174044..174951,175046..175246,175390..175447))	Acanthamoeba castellanii str. Neff	14913646
ACA1_091680	CDS	ACA1_091680	NW_004457313.1	176044	176436	R	encoded by transcript ACA1_091680A; uncharacterized protein	complement(176044..176436)	Acanthamoeba castellanii str. Neff	14913647
ACA1_091690	CDS	ACA1_091690	NW_004457313.1	180958	183749	D	encoded by transcript ACA1_091690A; tRNA nucleotidyltransferase/poly(A) polymerase family domain containing protein	join(180958..181137,181272..181380,181458..181591,181681..181782,181893..181969,182035..182122,182216..182529,182598..182880,182953..183122,183193..183290,183353..183423,183518..183566,183640..183749)	Acanthamoeba castellanii str. Neff	14913552
ACA1_091700	CDS	ACA1_091700	NW_004457313.1	183802	185405	R	encoded by transcript ACA1_091700A; zinc finger domain containing protein	complement(join(183802..184018,184105..184403,184515..184677,184765..184932,185011..185091,185191..185405))	Acanthamoeba castellanii str. Neff	14913553
ACA1_091710	CDS	ACA1_091710	NW_004457313.1	185556	188161	R	encoded by transcript ACA1_091710A; PAS domain Sbox domain containing protein	complement(join(185556..185733,185832..185937,185996..186268,186375..187013,187099..187300,187384..187443,187542..187706,187796..188161))	Acanthamoeba castellanii str. Neff	14913554
ACA1_091720	CDS	ACA1_091720	NW_004457313.1	188511	188723	D	encoded by transcript ACA1_091720A; ATP synthase subunit epsilon, mitochondrial, putative	188511..188723	Acanthamoeba castellanii str. Neff	14913581
ACA1_091730	CDS	ACA1_091730	NW_004457313.1	189054	190751	D	encoded by transcript ACA1_091730A; RNA recognition motif domain containing protein	join(189054..189555,189638..189697,189777..189871,190000..190066,190161..190228,190367..190559,190624..190751)	Acanthamoeba castellanii str. Neff	14913582
ACA1_091740	CDS	ACA1_091740	NW_004457313.1	191189	195173	D	encoded by transcript ACA1_091740A; RhoGEF domain containing protein	join(191189..191257,191336..191388,191486..191642,191745..191855,191947..191996,192125..192209,192308..192412,192501..192596,192706..192783,192851..193003,193037..193168,193268..193381,193554..195173)	Acanthamoeba castellanii str. Neff	14913583
ACA1_091750	CDS	ACA1_091750	NW_004457313.1	196391	197468	R	encoded by transcript ACA1_091750A; uncharacterized protein	complement(join(196391..196460,196595..196695,196828..196882,196904..196956,197038..197079,197199..197468))	Acanthamoeba castellanii str. Neff	14913495
ACA1_091760	CDS	ACA1_091760	NW_004457313.1	197829	199623	R	encoded by transcript ACA1_091760A; MORN repeat-containing protein	complement(join(197829..197912,197995..198104,198192..198367,198448..198521,198592..198713,198794..199002,199078..199207,199287..199374,199456..199623))	Acanthamoeba castellanii str. Neff	14913496
ACA1_091770	CDS	ACA1_091770	NW_004457313.1	199723	200722	D	encoded by transcript ACA1_091770A; DNA-7-methylguanine glycosylase	join(199723..200023,200105..200154,200216..200383,200440..200534,200614..200722)	Acanthamoeba castellanii str. Neff	14913181
ACA1_091780	CDS	ACA1_091780	NW_004457313.1	200823	202905	D	encoded by transcript ACA1_091780A; SET domain containing protein	join(200823..201051,201132..201412,201507..201663,201737..201900,201981..202061,202140..202246,202313..202469,202546..202905)	Acanthamoeba castellanii str. Neff	14913182
ACA1_091790	CDS	ACA1_091790	NW_004457313.1	202965	203591	R	encoded by transcript ACA1_091790A; riboflavin biosynthesis protein RibD Cterminal domain protein	complement(202965..203591)	Acanthamoeba castellanii str. Neff	14913176
ACA1_091800	CDS	ACA1_091800	NW_004457313.1	203708	205824	R	encoded by transcript ACA1_091800A; uncharacterized protein	complement(join(203708..203977,204050..204158,204267..204345,204421..204529,204629..204701,204738..204831,205019..205153,205168..205365,205485..205824))	Acanthamoeba castellanii str. Neff	14913177
ACA1_091810	CDS	ACA1_091810	NW_004457313.1	205965	206279	R	encoded by transcript ACA1_091810A; uncharacterized protein	complement(205965..206279)	Acanthamoeba castellanii str. Neff	14913178
ACA1_091820	CDS	ACA1_091820	NW_004457313.1	207031	210554	R	encoded by transcript ACA1_091820A; peptidase family M13, putative	complement(join(207031..207195,207295..207486,207565..207666,207756..207827,207910..208247,208325..208396,208471..208641,208716..208845,208922..208986,209070..209185,209252..209307,209404..209483,209580..209668,209745..209821,209922..210057,210135..210219,210341..210554))	Acanthamoeba castellanii str. Neff	14913486
ACA1_091830	CDS	ACA1_091830	NW_004457313.1	210855	212349	R	encoded by transcript ACA1_091830A; Ras subfamily Rab protein	complement(join(210855..211102,211255..211293,211373..211504,211588..211688,211788..211850,211932..212028,212259..212349))	Acanthamoeba castellanii str. Neff	14913487
ACA1_091840	CDS	ACA1_091840	NW_004457313.1	212570	215058	D	encoded by transcript ACA1_091840A; Ras subfamily protein	join(212570..212606,212669..212916,212977..213128,213218..213548,213621..213776,213882..214059,214133..214192,214255..214394,214497..214671,214730..215058)	Acanthamoeba castellanii str. Neff	14913488
ACA1_091850	CDS	ACA1_091850	NW_004457313.1	215094	217106	R	encoded by transcript ACA1_091850A; uncharacterized protein	complement(join(215094..215285,215363..215481,215561..215660,215741..215846,215926..216199,216298..216528,216723..216915,217023..217106))	Acanthamoeba castellanii str. Neff	14913450
ACA1_091860	CDS	ACA1_091860	NW_004457313.1	217732	218848	D	encoded by transcript ACA1_091860A; Rasrelated protein Rab5, putative	join(217732..217913,217983..218029,218104..218250,218379..218497,218687..218848)	Acanthamoeba castellanii str. Neff	14913451
ACA1_091870	CDS	ACA1_091870	NW_004457313.1	218997	219606	R	encoded by transcript ACA1_091870A; calmodulin, putative	complement(join(218997..219070,219156..219368,219429..219606))	Acanthamoeba castellanii str. Neff	14913126
ACA1_091880	CDS	ACA1_091880	NW_004457313.1	219779	220944	D	encoded by transcript ACA1_091880A; uncharacterized protein	join(219779..219989,220049..220189,220279..220382,220451..220522,220629..220745,220834..220944)	Acanthamoeba castellanii str. Neff	14913127
ACA1_091890	CDS	ACA1_091890	NW_004457313.1	221095	223522	D	encoded by transcript ACA1_091890A; zinc finger, c2h2 type domain containing protein	join(221095..221498,221625..221710,221796..221884,221991..222076,222166..222276,222398..222637,222743..222882,222978..223152,223252..223522)	Acanthamoeba castellanii str. Neff	14913128
ACA1_091900	CDS	ACA1_091900	NW_004457313.1	223626	224351	R	encoded by transcript ACA1_091900A; acylphosphatase	complement(join(223626..223935,224033..224146,224209..224221,224306..224351))	Acanthamoeba castellanii str. Neff	14913201
ACA1_091910	CDS	ACA1_091910	NW_004457313.1	224475	226381	R	encoded by transcript ACA1_091910A; NIPSNAP family protein	complement(join(224475..224562,224682..224744,224812..224952,225045..225149,225225..225369,225466..225577,225698..225769,226149..226226,226298..226381))	Acanthamoeba castellanii str. Neff	14913202
ACA1_091920	CDS	ACA1_091920	NW_004457313.1	226674	229845	D	encoded by transcript ACA1_091920A; uncharacterized protein	join(226674..226785,226880..226980,227080..227179,227290..227351,227481..227539,227638..227830,227949..228047,228167..228369,228474..228603,228684..228796,228891..228998,229103..229250,229358..229407,229483..229643,229730..229845)	Acanthamoeba castellanii str. Neff	14913448
ACA1_091930	CDS	ACA1_091930	NW_004457313.1	229994	231947	R	encoded by transcript ACA1_091930A; uncharacterized protein	complement(join(229994..230258,230343..230498,230580..230656,230730..230841,230939..231164,231234..231444,231533..231634,231708..231947))	Acanthamoeba castellanii str. Neff	14913449
ACA1_091940	CDS	ACA1_091940	NW_004457313.1	232249	234754	R	encoded by transcript ACA1_091940A; metallopeptidase	complement(join(232249..232420,232497..232681,232752..232853,232914..233021,233091..233207,233282..233382,233451..233756,233844..233981,234051..234122,234193..234305,234371..234444,234516..234601,234682..234754))	Acanthamoeba castellanii str. Neff	14913174
ACA1_091950	CDS	ACA1_091950	NW_004457313.1	234855	235646	R	encoded by transcript ACA1_091950A; endothelinconverting protein 1, putative	complement(join(234855..234938,235008..235130,235225..235343,235430..235646))	Acanthamoeba castellanii str. Neff	14913175
ACA1_091960	CDS	ACA1_091960	NW_004457313.1	235804	237670	R	encoded by transcript ACA1_091960A; uncharacterized protein	complement(join(235804..236286,236375..236516,236692..236779,236852..236987,237088..237349,237464..237518,237580..237670))	Acanthamoeba castellanii str. Neff	14913101
ACA1_091970	CDS	ACA1_091970	NW_004457313.1	238403	239558	R	encoded by transcript ACA1_091970A; RFX DNAbinding domain containing protein	complement(join(238403..238416,238481..238607,238693..239218,239500..239558))	Acanthamoeba castellanii str. Neff	14913102
ACA1_091980	CDS	ACA1_091980	NW_004457313.1	240252	241809	D	encoded by transcript ACA1_091980A; Synaptobrevin, putative	join(240252..240448,240521..240590,240660..240788,240876..240963,241178..241333,241709..241809)	Acanthamoeba castellanii str. Neff	14913103
ACA1_091990	CDS	ACA1_091990	NW_004457313.1	242254	242865	D	encoded by transcript ACA1_091990A; Hras1 protein	242254..242865	Acanthamoeba castellanii str. Neff	14913257
ACA1_092000	CDS	ACA1_092000	NW_004457313.1	243063	245395	R	encoded by transcript ACA1_092000A; uncharacterized protein	complement(join(243063..243171,243346..243958,244036..244151,244262..244323,244433..244529,244655..244784,244857..244995,245018..245043,245293..245395))	Acanthamoeba castellanii str. Neff	14913258
ACA1_092010	CDS	ACA1_092010	NW_004457313.1	246966	248302	D	encoded by transcript ACA1_092010A; uncharacterized protein	join(246966..247337,247444..247689,247764..247849,247933..248172,248254..248302)	Acanthamoeba castellanii str. Neff	14913259
ACA1_092020	CDS	ACA1_092020	NW_004457313.1	249299	250240	D	encoded by transcript ACA1_092020A; uncharacterized protein	join(249299..249535,249647..249737,249875..250066,250194..250240)	Acanthamoeba castellanii str. Neff	14913407
ACA1_092030	CDS	ACA1_092030	NW_004457313.1	250923	252507	R	encoded by transcript ACA1_092030A; hydrolase, NUDIX domain containing protein	complement(join(250923..251449,251528..251575,251667..251736,251840..251922,252003..252507))	Acanthamoeba castellanii str. Neff	14913408
ACA1_092040	CDS	ACA1_092040	NW_004457313.1	252814	254788	D	encoded by transcript ACA1_092040A; pyridine nucleotidedisulfide oxidoreductase domain containing protein	join(252814..252930,253017..253185,253249..253340,253416..253501,253576..253652,253713..253839,253909..253973,254049..254175,254260..254701,254771..254788)	Acanthamoeba castellanii str. Neff	14913409
ACA1_092050	CDS	ACA1_092050	NW_004457313.1	255165	260343	D	encoded by transcript ACA1_092050A; phosphate ABC transporter, phosphate-binding protein PstS protein	join(255165..255219,255302..255390,255449..255655,255803..255943,256038..256356,256429..256570,256645..256751,256838..256870,256910..256987,257057..257169,257239..257466,257531..257652,257733..257881,257959..258106,258193..258715,258789..258905,258985..259081,259180..259398,259476..259527,259617..260343)	Acanthamoeba castellanii str. Neff	14913267
ACA1_092060	CDS	ACA1_092060	NW_004457313.1	260432	261981	D	encoded by transcript ACA1_092060A; serine/threonine kinase	join(260432..260693,260769..261215,261294..261599,261665..261981)	Acanthamoeba castellanii str. Neff	14913268
ACA1_092070	CDS	ACA1_092070	NW_004457313.1	262087	264894	D	encoded by transcript ACA1_092070A; F-box domain containing protein	join(262087..262272,262356..262475,262676..263210,263313..263347,263387..263539,263628..263801,263893..264183,264325..264894)	Acanthamoeba castellanii str. Neff	14913660
ACA1_092080	CDS	ACA1_092080	NW_004457313.1	265067	267290	R	encoded by transcript ACA1_092080A; alpha/beta fold family hydrolase	complement(join(265067..265170,265362..265412,265507..265555,265637..265750,265835..265889,265992..266077,266168..266268,266355..266445,266543..266642,266717..266830,266921..266970,267093..267290))	Acanthamoeba castellanii str. Neff	14913661
ACA1_092090	CDS	ACA1_092090	NW_004457313.1	267562	269706	R	encoded by transcript ACA1_092090A; FYVEtype Zn finger-containing protein	complement(join(267562..267784,267901..268072,268151..268358,268441..268533,268781..268915,269007..269084,269206..269706))	Acanthamoeba castellanii str. Neff	14913662
ACA1_092100	CDS	ACA1_092100	NW_004457313.1	269963	270952	D	encoded by transcript ACA1_092100A; Znfinger domain containing protein	join(269963..270145,270251..270952)	Acanthamoeba castellanii str. Neff	14913471
ACA1_092110	CDS	ACA1_092110	NW_004457313.1	271318	273177	D	encoded by transcript ACA1_092110A; uncharacterized protein	join(271318..271525,271618..271725,271835..271960,272027..272142,272219..272272,272378..272437,272513..272620,272724..272847,272999..273177)	Acanthamoeba castellanii str. Neff	14913472
ACA1_092120	CDS	ACA1_092120	NW_004457313.1	273243	275838	R	encoded by transcript ACA1_092120A; Fbox domain containing protein	complement(join(273243..273725,273745..274050,274191..274364,274460..274612,274652..274686,274783..275207,275440..275570,275656..275838))	Acanthamoeba castellanii str. Neff	14913319
ACA1_092130	CDS	ACA1_092130	NW_004457313.1	276906	283677	R	encoded by transcript ACA1_092130A; serine/threonine protein kinase	complement(join(276906..277222,277293..277598,277677..278117,278188..279164,279246..279297,279379..279588,279674..279770,279846..279962,280048..280570,280637..280784,280859..281007,281085..281206,281296..281529,281596..281687,281785..281934,281996..282102,282172..282313,282375..282537,282613..282774,282876..283016,283204..283477,283494..283569,283629..283677))	Acanthamoeba castellanii str. Neff	14913320
ACA1_092140	CDS	ACA1_092140	NW_004457313.1	284149	285780	D	encoded by transcript ACA1_092140A; RNA pseudouridine synthase	join(284149..284262,284322..284380,284456..284585,284665..284727,284900..284959,285078..285172,285237..285331,285420..285565,285724..285780)	Acanthamoeba castellanii str. Neff	14913379
ACA1_092150	CDS	ACA1_092150	NW_004457313.1	286386	289381	D	encoded by transcript ACA1_092150A; uncharacterized protein	join(286386..286946,287086..287172,287290..287538,287614..287712,287875..288226,288321..288493,288521..289381)	Acanthamoeba castellanii str. Neff	14913380
ACA1_092160	CDS	ACA1_092160	NW_004457313.1	289473	290967	D	encoded by transcript ACA1_092160A; xylose isomerase domain containing protein	join(289473..289695,289789..290019,290096..290185,290249..290375,290463..290576,290617..290694,290784..290967)	Acanthamoeba castellanii str. Neff	14913274
ACA1_092170	CDS	ACA1_092170	NW_004457313.1	291074	293852	D	encoded by transcript ACA1_092170A; serine carboxypeptidase	join(291074..291100,291143..291199,291296..291431,291554..291682,291754..291822,291955..292045,292155..292270,292348..292390,292541..292601,292709..292813,292939..293148,293276..293460,293553..293629,293710..293751,293815..293852)	Acanthamoeba castellanii str. Neff	14913275
ACA1_092180	CDS	ACA1_092180	NW_004457313.1	294008	294502	R	encoded by transcript ACA1_092180A; ubiquitin family (UBL) post-translational modifier, putative	complement(294008..294502)	Acanthamoeba castellanii str. Neff	14913516
ACA1_092190	CDS	ACA1_092190	NW_004457313.1	294622	296248	R	encoded by transcript ACA1_092190A; uncharacterized protein	complement(join(294622..295156,295292..295404,295558..295586,295664..295806,295936..296051,296171..296248))	Acanthamoeba castellanii str. Neff	14913517
ACA1_092200	CDS	ACA1_092200	NW_004457313.1	296305	299853	R	encoded by transcript ACA1_092200A; uncharacterized protein	complement(join(296305..296729,296810..297043,297233..297383,297490..297621,297688..297723,297745..297869,297933..298048,298122..299057,299076..299129,299588..299853))	Acanthamoeba castellanii str. Neff	14913518
ACA1_092210	CDS	ACA1_092210	NW_004457313.1	300615	301956	R	encoded by transcript ACA1_092210A; uncharacterized protein	complement(join(300615..300938,301052..301148,301222..301421,301479..301694,301822..301956))	Acanthamoeba castellanii str. Neff	14913317
ACA1_092220	CDS	ACA1_092220	NW_004457313.1	302219	303998	R	encoded by transcript ACA1_092220A; hydrolase, putative	complement(join(302219..302320,302391..302546,302610..302676,302793..302890,302976..303106,303216..303332,303408..303591,303744..303998))	Acanthamoeba castellanii str. Neff	14913318
ACA1_092230	CDS	ACA1_092230	NW_004457313.1	307866	308042	D	encoded by transcript ACA1_092230A; uncharacterized protein	307866..308042	Acanthamoeba castellanii str. Neff	14913562
ACA1_092340	CDS	ACA1_092340	NW_004457313.1	315207	316758	D	encoded by transcript ACA1_092340A; uncharacterized protein	join(315207..315420,315482..315609,315717..315771,315894..316054,316681..316758)	Acanthamoeba castellanii str. Neff	14913563
ACA1_092350	CDS	ACA1_092350	NW_004457313.1	317982	320309	D	encoded by transcript ACA1_092350A; uncharacterized protein	join(317982..318020,318119..318214,318385..318609,318679..319195,319299..319379,319480..320309)	Acanthamoeba castellanii str. Neff	14913564
ACA1_092360	CDS	ACA1_092360	NW_004457313.1	320529	324252	R	encoded by transcript ACA1_092360A; uncharacterized protein	complement(join(320529..322248,322330..322517,322601..323065,323142..323578,323667..324252))	Acanthamoeba castellanii str. Neff	14913593
ACA1_092370	CDS	ACA1_092370	NW_004457313.1	324704	328692	R	encoded by transcript ACA1_092370A; telomerase reverse transcriptase	complement(join(324704..324772,324842..324962,325083..325167,325232..325501,325545..325628,325704..325873,325982..326045,326125..326189,326330..326448,326534..326650,326737..326931,327024..327206,327280..327401,327585..327735,327814..327913,328022..328241,328309..328480,328564..328692))	Acanthamoeba castellanii str. Neff	14913594
ACA1_092380	CDS	ACA1_092380	NW_004457313.1	328814	331854	R	encoded by transcript ACA1_092380A; uncharacterized protein	complement(join(328814..329125,329222..329364,329429..330764,331129..331189,331256..331345,331411..331549,331632..331854))	Acanthamoeba castellanii str. Neff	14913595
ACA1_092390	CDS	ACA1_092390	NW_004457313.1	332020	333408	D	encoded by transcript ACA1_092390A; CBS domain containing protein	join(332020..332178,332240..332392,332492..332568,332632..332876,332938..333051,333108..333185,333251..333408)	Acanthamoeba castellanii str. Neff	14913456
ACA1_092400	CDS	ACA1_092400	NW_004457313.1	333517	334915	D	encoded by transcript ACA1_092400A; HD domain containing protein	join(333517..333949,334057..334156,334223..334331,334402..334516,334669..334684,334759..334915)	Acanthamoeba castellanii str. Neff	14913457
ACA1_092410	CDS	ACA1_092410	NW_004457313.1	335158	336314	D	encoded by transcript ACA1_092410A; oxidoreductase, 2nitropropane dioxygenase subfamily protein	join(335158..335296,335374..336314)	Acanthamoeba castellanii str. Neff	14913531
ACA1_092420	CDS	ACA1_092420	NW_004457313.1	336480	339765	D	encoded by transcript ACA1_092420A; uncharacterized protein	join(336480..336512,336715..336820,336899..337061,337165..337440,337560..337707,337818..337894,337961..338082,338249..338869,338960..339050,339144..339302,339391..339488,339734..339765)	Acanthamoeba castellanii str. Neff	14913532
ACA1_092430	CDS	ACA1_092430	NW_004457313.1	339686	341199	R	encoded by transcript ACA1_092430A; 2-dehydropantoate 2-reductase subfamily protein	complement(join(339686..339963,340051..340264,340369..340451,340547..340877,340926..341020,341085..341199))	Acanthamoeba castellanii str. Neff	14913533
ACA1_092460	CDS	ACA1_092460	NW_004457313.1	351692	354763	D	encoded by transcript ACA1_092460A; uncharacterized protein	join(351692..351766,352133..353199,353293..353408,353485..353539,353627..354027,354102..354763)	Acanthamoeba castellanii str. Neff	14913477
ACA1_092580	CDS	ACA1_092580	NW_004457313.1	359683	360856	D	encoded by transcript ACA1_092580A; uncharacterized protein	join(359683..359883,360065..360533,360607..360774,360834..360856)	Acanthamoeba castellanii str. Neff	14913159
ACA1_092590	CDS	ACA1_092590	NW_004457313.1	360961	363402	R	encoded by transcript ACA1_092590A; leucine rich repeat domain containing protein	complement(join(360961..361078,361160..361322,361407..361504,361581..361801,361844..361941,362014..362125,362197..362475,362548..362893,362966..363402))	Acanthamoeba castellanii str. Neff	14913160
ACA1_092600	CDS	ACA1_092600	NW_004457313.1	363562	364884	R	encoded by transcript ACA1_092600A; NlpC/P60 domain containing protein	complement(join(363562..363642,363713..363984,364062..364257,364332..364469,364544..364699,364810..364884))	Acanthamoeba castellanii str. Neff	14913161
ACA1_092610	CDS	ACA1_092610	NW_004457313.1	365710	368759	D	encoded by transcript ACA1_092610A; EF hand domain containing protein	join(365710..366553,366640..366774,366855..366970,367057..367198,367222..367354,367419..367539,367675..367815,367913..368078,368252..368438,368525..368759)	Acanthamoeba castellanii str. Neff	14913324
ACA1_092620	CDS	ACA1_092620	NW_004457313.1	369054	370307	D	encoded by transcript ACA1_092620A; uncharacterized protein	join(369054..369113,369309..369428,369486..369584,369625..369951,370038..370107,370153..370307)	Acanthamoeba castellanii str. Neff	14913325
ACA1_092630	CDS	ACA1_092630	NW_004457313.1	371068	372054	D	encoded by transcript ACA1_092630A; uncharacterized protein	join(371068..371250,371327..371826,371940..372054)	Acanthamoeba castellanii str. Neff	14913326
ACA1_092640	CDS	ACA1_092640	NW_004457313.1	373192	376143	R	encoded by transcript ACA1_092640A; amidase domain containing protein	complement(join(373192..373302,373379..373459,373559..373780,373861..373983,374159..374287,374394..374545,374637..374728,374827..374890,374972..375101,375220..375308,375381..375437,375533..375623,375757..375902,376011..376143))	Acanthamoeba castellanii str. Neff	14913441
ACA1_092650	CDS	ACA1_092650	NW_004457313.1	377032	378719	D	encoded by transcript ACA1_092650A; GTPase domain containing protein	join(377032..377208,377288..377728,377814..378120,378179..378276,378360..378719)	Acanthamoeba castellanii str. Neff	14913442
ACA1_092660	CDS	ACA1_092660	NW_004457313.1	378869	379701	R	encoded by transcript ACA1_092660A; uncharacterized protein	complement(join(378869..379049,379144..379254,379362..379516,379588..379701))	Acanthamoeba castellanii str. Neff	14913648
ACA1_092670	CDS	ACA1_092670	NW_004457313.1	379819	381818	D	encoded by transcript ACA1_092670A; uncharacterized protein	join(379819..380283,380368..380450,380564..380710,380772..380948,381026..381193,381281..381818)	Acanthamoeba castellanii str. Neff	14913649
ACA1_092680	CDS	ACA1_092680	NW_004457313.1	381939	384257	R	encoded by transcript ACA1_092680A; herpesviridae ul52/ul70 dna primase	complement(join(381939..382265,382358..382957,383179..383468,383567..384032,384138..384257))	Acanthamoeba castellanii str. Neff	14913650
ACA1_092690	CDS	ACA1_092690	NW_004457313.1	384409	385013	R	encoded by transcript ACA1_092690A; uncharacterized protein	complement(join(384409..384505,384571..385013))	Acanthamoeba castellanii str. Neff	14913628
ACA1_092700	CDS	ACA1_092700	NW_004457313.1	386134	386748	D	encoded by transcript ACA1_092700A; uncharacterized protein	join(386134..386178,386237..386462,386543..386748)	Acanthamoeba castellanii str. Neff	14913629
ACA1_092710	CDS	ACA1_092710	NW_004457313.1	386902	390378	R	encoded by transcript ACA1_092710A; Arf GTPase activating protein	complement(join(386902..388071,388127..388296,388428..389186,389271..389542,389682..389776,389914..389993,390288..390378))	Acanthamoeba castellanii str. Neff	14913630
ACA1_092730	CDS	ACA1_092730	NW_004457313.1	391833	395349	R	encoded by transcript ACA1_092730A; Fbox domain containing protein	complement(join(391833..392143,392255..392419,392536..392619,392755..392952,393065..393167,393250..393372,393488..393543,393640..393747,393876..394097,394257..394365,394459..394599,394696..395349))	Acanthamoeba castellanii str. Neff	14913343
ACA1_092740	CDS	ACA1_092740	NW_004457313.1	395540	396742	D	encoded by transcript ACA1_092740A; steroid isomerase	join(395540..396065,396408..396742)	Acanthamoeba castellanii str. Neff	14913344
ACA1_092750	CDS	ACA1_092750	NW_004457313.1	396871	398249	R	encoded by transcript ACA1_092750A; oxidoreductase, aldo/keto reductase superfamily protein	complement(join(396871..397230,397321..397633,397728..397795,397866..397979,398154..398249))	Acanthamoeba castellanii str. Neff	14913508
ACA1_092760	CDS	ACA1_092760	NW_004457313.1	398551	400204	R	encoded by transcript ACA1_092760A; uncharacterized protein	complement(join(398551..398964,399012..399191,399265..399460,399553..400039,400096..400204))	Acanthamoeba castellanii str. Neff	14913509
ACA1_092770	CDS	ACA1_092770	NW_004457313.1	400293	402128	R	encoded by transcript ACA1_092770A; uncharacterized protein	complement(join(400293..400522,400617..400679,400911..401628,401731..401933,402017..402128))	Acanthamoeba castellanii str. Neff	14913510
ACA1_092780	CDS	ACA1_092780	NW_004457313.1	402376	403657	R	encoded by transcript ACA1_092780A; phosphatase	complement(join(402376..402690,402764..402876,403045..403657))	Acanthamoeba castellanii str. Neff	14913511
ACA1_092790	CDS	ACA1_092790	NW_004457313.1	404144	405810	R	encoded by transcript ACA1_092790A; UAA transporter family protein	complement(join(404144..404227,404281..404343,404404..404449,404545..404720,404784..404881,404944..405065,405103..405167,405267..405363,405463..405578,405670..405810))	Acanthamoeba castellanii str. Neff	14913301
ACA1_092800	CDS	ACA1_092800	NW_004457313.1	405948	408726	R	encoded by transcript ACA1_092800A; TRAUB domain containing protein	complement(join(405948..406076,406150..406262,406369..406495,406588..406708,406788..406888,406979..407393,407488..407604,407693..408225,408337..408422,408606..408726))	Acanthamoeba castellanii str. Neff	14913302
ACA1_092810	CDS	ACA1_092810	NW_004457313.1	409004	410600	D	encoded by transcript ACA1_092810A; SRP40, C-terminal domain containing protein	join(409004..409102,409178..409239,409455..410212,410401..410451,410551..410600)	Acanthamoeba castellanii str. Neff	14913144
ACA1_092820	CDS	ACA1_092820	NW_004457313.1	411334	415575	R	encoded by transcript ACA1_092820A; dipeptidyl peptidase	complement(join(411334..411413,411561..411653,411810..411903,411985..412085,412168..412240,412340..412528,412675..412755,412888..412933,412999..413115,413225..413278,413385..413506,413600..413683,413750..413914,414030..414160,414273..414341,414457..414550,414636..414756,414854..415052,415084..415238,415303..415327,415398..415575))	Acanthamoeba castellanii str. Neff	14913145
ACA1_092830	CDS	ACA1_092830	NW_004457313.1	415734	417611	D	encoded by transcript ACA1_092830A; WD domain, G-beta repeat-containing protein	join(415734..415967,416042..416125,416203..416353,416432..416595,416662..416763,416838..416898,416981..417063,417159..417400,417446..417611)	Acanthamoeba castellanii str. Neff	14913146
ACA1_092840	CDS	ACA1_092840	NW_004457313.1	417784	418316	R	encoded by transcript ACA1_092840A; uncharacterized protein	complement(join(417784..417890,417979..418129,418266..418316))	Acanthamoeba castellanii str. Neff	14913483
ACA1_092850	CDS	ACA1_092850	NW_004457313.1	418624	421376	D	encoded by transcript ACA1_092850A; Non-specific lipid-transfer protein	join(418624..418773,418898..419150,419321..419454,419622..419720,419850..419936,420024..420209,420352..420430,420510..420677,420778..421217,421305..421376)	Acanthamoeba castellanii str. Neff	14913443
ACA1_092860	CDS	ACA1_092860	NW_004457313.1	421489	425550	R	encoded by transcript ACA1_092860A; WD domain, G-beta repeat-containing protein	complement(join(421489..421630,421701..421820,421920..422047,422191..422297,422436..422610,422722..422933,423023..423245,423388..423503,423644..423880,423987..424371,424465..424689,424775..424828,424934..425067,425169..425244,425362..425550))	Acanthamoeba castellanii str. Neff	14913444
ACA1_092870	CDS	ACA1_092870	NW_004457313.1	425698	427032	R	encoded by transcript ACA1_092870A; aromatic ringopening dioxygenase, catalytic subunit LigB superfamily protein	complement(join(425698..425824,425932..426095,426168..426276,426367..426595,426684..426736,426842..427032))	Acanthamoeba castellanii str. Neff	14913445
ACA1_092880	CDS	ACA1_092880	NW_004457313.1	427575	429742	D	encoded by transcript ACA1_092880A; Ubox domain containing protein	join(427575..428069,428319..428675,428756..428871,428958..429082,429162..429317,429411..429543,429610..429742)	Acanthamoeba castellanii str. Neff	14913555
ACA1_092890	CDS	ACA1_092890	NW_004457313.1	430008	432248	D	encoded by transcript ACA1_092890A; actinfragmin kinase	join(430008..430032,430320..430428,430578..430678,430822..430913,431058..431217,431322..431489,431606..431781,431940..432248)	Acanthamoeba castellanii str. Neff	14913556
ACA1_092900	CDS	ACA1_092900	NW_004457313.1	432402	434628	R	encoded by transcript ACA1_092900A; sphingomyelin phosphodiesterase	complement(join(432402..432641,432747..432900,433006..433208,433306..433407,433533..433633,433715..433849,433991..434083,434349..434467,434591..434628))	Acanthamoeba castellanii str. Neff	14913429
ACA1_092910	CDS	ACA1_092910	NW_004457313.1	434726	435586	R	encoded by transcript ACA1_092910A; uncharacterized protein	complement(join(434726..434862,434954..435048,435195..435586))	Acanthamoeba castellanii str. Neff	14913430
ACA1_092930	CDS	ACA1_092930	NW_004457313.1	440428	443226	R	encoded by transcript ACA1_092930A; MYND finger domain containing protein	complement(join(440428..440581,440680..440767,440854..440926,441010..441206,441311..441410,441494..441603,441728..441815,442008..442047,442157..442294,442404..442474,442542..442781,442882..443226))	Acanthamoeba castellanii str. Neff	14913218
ACA1_092940	CDS	ACA1_092940	NW_004457313.1	443548	443811	D	encoded by transcript ACA1_092940A; uncharacterized protein	join(443548..443699,443769..443811)	Acanthamoeba castellanii str. Neff	14913219
ACA1_092950	CDS	ACA1_092950	NW_004457313.1	443979	445764	R	encoded by transcript ACA1_092950A; Poly(ADPribose) polymerase	complement(join(443979..444219,444350..444443,444521..444646,444723..445764))	Acanthamoeba castellanii str. Neff	14913220
ACA1_092960	CDS	ACA1_092960	NW_004457313.1	446534	448051	R	encoded by transcript ACA1_092960A; uncharacterized protein	complement(446534..448051)	Acanthamoeba castellanii str. Neff	14913657
ACA1_092970	CDS	ACA1_092970	NW_004457313.1	448885	449664	R	encoded by transcript ACA1_092970A; ADPribosylation factor 1, putative	complement(join(448885..449217,449298..449368,449438..449519,449596..449664))	Acanthamoeba castellanii str. Neff	14913658
ACA1_092980	CDS	ACA1_092980	NW_004457313.1	450195	452638	D	encoded by transcript ACA1_092980A; serine/threonine kinase	join(450195..450470,450667..450865,450989..451065,451169..451273,451410..451480,451586..451667,451783..451905,452027..452638)	Acanthamoeba castellanii str. Neff	14913659
ACA1_092990	CDS	ACA1_092990	NW_004457313.1	452853	453573	R	encoded by transcript ACA1_092990A; zinc knuckle domain containing protein	complement(join(452853..453106,453225..453573))	Acanthamoeba castellanii str. Neff	14913459
ACA1_093000	CDS	ACA1_093000	NW_004457313.1	455343	456733	D	encoded by transcript ACA1_093000A; uncharacterized protein	join(455343..455802,456261..456418,456587..456733)	Acanthamoeba castellanii str. Neff	14913460
ACA1_093010	CDS	ACA1_093010	NW_004457313.1	457122	458332	D	encoded by transcript ACA1_093010A; BNR/Aspbox repeat domain containing protein	join(457122..457472,457541..457718,457800..458332)	Acanthamoeba castellanii str. Neff	14913461
ACA1_093020	CDS	ACA1_093020	NW_004457313.1	459470	461733	R	encoded by transcript ACA1_093020A; cell division cycle protein, putative	complement(join(459470..459715,459803..460070,460124..460260,460350..460436,460511..460692,460789..460820,460875..461000,461088..461320,461436..461568,461681..461733))	Acanthamoeba castellanii str. Neff	14913462
ACA1_093030	CDS	ACA1_093030	NW_004457313.1	461865	465554	D	encoded by transcript ACA1_093030A; dynamin domain containing protein	join(461865..461879,461933..462045,462134..462173,462322..462426,462537..462687,462794..462909,463023..463112,463200..463284,463356..463464,463536..463614,463677..463827,463893..463978,464082..464189,464271..464353,464434..464533,464618..464755,464852..464941,465156..465233,465303..465380,465435..465554)	Acanthamoeba castellanii str. Neff	14913463
ACA1_093040	CDS	ACA1_093040	NW_004457313.1	466418	466953	D	encoded by transcript ACA1_093040A; uncharacterized protein	join(466418..466610,466668..466778,466835..466953)	Acanthamoeba castellanii str. Neff	14913464
ACA1_093050	CDS	ACA1_093050	NW_004457313.1	467139	469595	D	encoded by transcript ACA1_093050A; smu1 suppressor, putative	join(467139..467164,467248..467314,467402..467545,467625..467829,467928..468115,468217..468357,468462..468685,468765..468858,468957..468978,469045..469157,469236..469391,469488..469595)	Acanthamoeba castellanii str. Neff	14913385
ACA1_093060	CDS	ACA1_093060	NW_004457313.1	470053	472179	D	encoded by transcript ACA1_093060A; PAP2 superfamily domain containing protein	join(470053..470684,470772..470849,470991..471086,471175..471299,471415..471487,471593..471750,471845..472179)	Acanthamoeba castellanii str. Neff	14913386
ACA1_093070	CDS	ACA1_093070	NW_004457313.1	473101	475212	D	encoded by transcript ACA1_093070A; uncharacterized protein	join(473101..473858,473941..474061,474196..474396,474469..475212)	Acanthamoeba castellanii str. Neff	14913236
ACA1_093080	CDS	ACA1_093080	NW_004457313.1	476029	477672	D	encoded by transcript ACA1_093080A; uncharacterized protein	join(476029..476148,476170..476666,476750..476870,476961..477161,477262..477672)	Acanthamoeba castellanii str. Neff	14913237
ACA1_093090	CDS	ACA1_093090	NW_004457313.1	478035	479616	D	encoded by transcript ACA1_093090A; uncharacterized protein	join(478035..478086,478253..478331,478398..478575,478663..478761,478848..478957,479031..479107,479183..479268,479352..479423,479521..479616)	Acanthamoeba castellanii str. Neff	14913238
ACA1_093100	CDS	ACA1_093100	NW_004457313.1	479681	481195	R	encoded by transcript ACA1_093100A; exostosin family protein	complement(479681..481195)	Acanthamoeba castellanii str. Neff	14913469
ACA1_093110	CDS	ACA1_093110	NW_004457313.1	481488	483190	D	encoded by transcript ACA1_093110A; uncharacterized protein	join(481488..481557,481630..481691,481846..481958,482029..482209,482303..482401,482465..482574,482666..482742,482802..482884,482949..483020,483098..483190)	Acanthamoeba castellanii str. Neff	14913470
ACA1_093130	CDS	ACA1_093130	NW_004457313.1	489333	491355	D	encoded by transcript ACA1_093130A; tryptophan-tRNA ligase	join(489333..489565,489719..489838,489932..490114,490226..490430,490687..490860,490954..491094,491194..491355)	Acanthamoeba castellanii str. Neff	14913578
ACA1_093140	CDS	ACA1_093140	NW_004457313.1	491463	493380	R	encoded by transcript ACA1_093140A; base excision DNA repair protein, HhHGPD subfamily protein	complement(join(491463..491858,491930..492039,492121..492347,492554..492626,492702..493380))	Acanthamoeba castellanii str. Neff	14913579
ACA1_093150	CDS	ACA1_093150	NW_004457313.1	494170	497372	D	encoded by transcript ACA1_093150A; PAS domain Sbox domain containing protein	join(494170..494241,494360..494460,494631..494706,494789..495041,495123..495222,495340..495607,495697..496119,496207..496303,496410..496535,496629..496764,496874..497025,497107..497234,497325..497372)	Acanthamoeba castellanii str. Neff	14913580
ACA1_093160	CDS	ACA1_093160	NW_004457313.1	497571	499658	R	encoded by transcript ACA1_093160A; guanine nucleotidebinding protein g(i), alpha-1 subunit	complement(join(497571..497770,497891..498008,498122..498254,498373..498534,498635..498750,498825..498911,499012..499185,499539..499658))	Acanthamoeba castellanii str. Neff	14913623
ACA1_093170	CDS	ACA1_093170	NW_004457313.1	499998	501670	D	encoded by transcript ACA1_093170A; kelch repeat-containing protein	join(499998..500197,500317..500465,500577..500708,500769..500921,500993..501151,501261..501425,501504..501670)	Acanthamoeba castellanii str. Neff	14913624
ACA1_093180	CDS	ACA1_093180	NW_004457313.1	504164	507504	R	encoded by transcript ACA1_093180A; uncharacterized protein	complement(join(504164..504562,504858..505080,505171..505348,505428..505547,505642..505687,505792..505854,505910..506399,506543..506666,506756..506905,507012..507504))	Acanthamoeba castellanii str. Neff	14913473
ACA1_093290	CDS	ACA1_093290	NW_004457313.1	507657	510525	R	encoded by transcript ACA1_093290A; WD domain, G-beta repeat-containing protein	complement(join(507657..507741,507812..507955,508055..508137,508204..508308,508410..508590,508664..508734,508820..509008,509154..509306,509397..509462,509626..509712,509984..510070,510445..510525))	Acanthamoeba castellanii str. Neff	14913474
ACA1_093300	CDS	ACA1_093300	NW_004457313.1	510828	514660	D	encoded by transcript ACA1_093300A; DEAD/DEAH box helicase domain containing protein	join(510828..511857,512003..512091,512222..512299,512362..512417,512490..512672,512765..512893,512927..513041,513160..513231,513315..513414,513654..513767,513883..513957,514030..514167,514290..514444,514526..514660)	Acanthamoeba castellanii str. Neff	14913427
ACA1_093310	CDS	ACA1_093310	NW_004457313.1	514719	516198	D	encoded by transcript ACA1_093310A; uncharacterized protein	join(514719..514810,514936..515030,515149..515213,515303..515393,515519..515543,515615..515729,515800..515935,516062..516198)	Acanthamoeba castellanii str. Neff	14913428
ACA1_093320	CDS	ACA1_093320	NW_004457313.1	516527	516841	D	encoded by transcript ACA1_093320A; uncharacterized protein	join(516527..516560,516636..516841)	Acanthamoeba castellanii str. Neff	14913522
ACA1_093330	CDS	ACA1_093330	NW_004457313.1	516939	518402	R	encoded by transcript ACA1_093330A; Ras subfamily protein	complement(join(516939..517201,517344..517412,517499..517565,517646..517708,517821..517870,517961..518029,518102..518200,518375..518402))	Acanthamoeba castellanii str. Neff	14913523
ACA1_093340	CDS	ACA1_093340	NW_004457313.1	518839	520380	R	encoded by transcript ACA1_093340A; zinc finger, c2h2 type domain containing protein	complement(join(518839..519145,519230..519642,519824..519995,520172..520380))	Acanthamoeba castellanii str. Neff	14913524
ACA1_093350	CDS	ACA1_093350	NW_004457313.1	521368	526561	D	encoded by transcript ACA1_093350A; Fbox domain containing protein	join(521368..521517,521670..522030,522153..522211,522307..522586,522678..522873,522944..523082,523182..523311,523429..523539,523622..523677,523771..523858,523985..524273,524361..524534,524629..524765,524831..524906,525081..525258,525364..525501,525580..525658,525822..525934,526040..526288,526400..526561)	Acanthamoeba castellanii str. Neff	14913360
ACA1_093360	CDS	ACA1_093360	NW_004457313.1	527266	528108	D	encoded by transcript ACA1_093360A; uncharacterized protein	join(527266..527495,527587..527723,527798..528108)	Acanthamoeba castellanii str. Neff	14913361
ACA1_093370	CDS	ACA1_093370	NW_004457313.1	528202	530925	R	encoded by transcript ACA1_093370A; cathepsin A, putative	complement(join(528202..528255,528380..528601,528736..528872,528967..529008,529067..529206,529323..529399,529501..529571,529632..529776,529889..529977,530075..530135,530219..530316,530440..530549,530687..530757,530842..530925))	Acanthamoeba castellanii str. Neff	14913575
ACA1_093380	CDS	ACA1_093380	NW_004457313.1	531153	531897	R	encoded by transcript ACA1_093380A; glyoxalase I, putative	complement(join(531153..531292,531382..531623,531764..531897))	Acanthamoeba castellanii str. Neff	14913576
ACA1_093390	CDS	ACA1_093390	NW_004457313.1	531995	534115	R	encoded by transcript ACA1_093390A; uncharacterized protein	complement(join(531995..532389,532450..532591,532756..532941,533108..533232,533346..533422,533524..533573,533654..533860,533945..534005,534054..534115))	Acanthamoeba castellanii str. Neff	14913371
ACA1_093400	CDS	ACA1_093400	NW_004457313.1	534276	537393	R	encoded by transcript ACA1_093400A; DUF1237 domain protein	complement(join(534276..534386,534463..534561,534660..534718,534841..535018,535155..535267,535355..535421,535515..535676,535839..535951,536054..536131,536260..536353,536424..536498,536845..536908,537098..537195,537277..537393))	Acanthamoeba castellanii str. Neff	14913372
ACA1_093410	CDS	ACA1_093410	NW_004457313.1	537853	542082	D	encoded by transcript ACA1_093410A; helicase conserved Cterminal domain containing protein	join(537853..537953,538105..540138,540273..540381,540495..540567,540731..540804,540977..541491,541641..541750,541952..542082)	Acanthamoeba castellanii str. Neff	14913373
ACA1_093420	CDS	ACA1_093420	NW_004457313.1	542163	545604	R	encoded by transcript ACA1_093420A; uncharacterized protein	complement(join(542163..542358,542477..542639,542781..543087,543217..543305,543390..544080,544212..544305,544516..544569,544841..544914,545027..545122,545368..545604))	Acanthamoeba castellanii str. Neff	14913309
ACA1_093430	CDS	ACA1_093430	NW_004457313.1	545891	546473	R	encoded by transcript ACA1_093430A; Hypothetical protein	complement(join(545891..546007,546086..546251,546352..546473))	Acanthamoeba castellanii str. Neff	14913310
ACA1_093440	CDS	ACA1_093440	NW_004457313.1	546573	548019	R	encoded by transcript ACA1_093440A; ATP binding protein	complement(join(546573..546716,546809..546902,546986..547146,547232..547323,547439..547600,547747..547855,547972..548019))	Acanthamoeba castellanii str. Neff	14913129
ACA1_093450	CDS	ACA1_093450	NW_004457313.1	548093	551103	D	encoded by transcript ACA1_093450A; Tubulin/FtsZ family, GTPase domain containing protein	join(548093..548445,548559..548632,548712..548789,548942..549083,549184..549250,549375..549402,549488..549637,549769..549878,549950..550027,550154..550206,550386..551103)	Acanthamoeba castellanii str. Neff	14913130
ACA1_093460	CDS	ACA1_093460	NW_004457313.1	551191	553161	R	encoded by transcript ACA1_093460A; histone deacetylase	complement(join(551191..551430,551523..551607,551717..551867,551959..552054,552292..552346,552434..552575,552675..552804,553014..553161))	Acanthamoeba castellanii str. Neff	14913131
ACA1_093470	CDS	ACA1_093470	NW_004457313.1	553314	554412	D	encoded by transcript ACA1_093470A; ADPribosylation factor subfamily protein	join(553314..553930,553951..554122,554293..554412)	Acanthamoeba castellanii str. Neff	14913106
ACA1_093480	CDS	ACA1_093480	NW_004457313.1	556064	558072	D	encoded by transcript ACA1_093480A; helicase associated domain containing protein	join(556064..557280,557399..557508,557635..557711,557803..558072)	Acanthamoeba castellanii str. Neff	14913107
ACA1_093490	CDS	ACA1_093490	NW_004457313.1	558449	560095	D	encoded by transcript ACA1_093490A; GTPase activating protein	join(558449..558471,558553..558620,558694..558740,558824..558910,559007..559123,559177..559844,559936..560095)	Acanthamoeba castellanii str. Neff	14913321
ACA1_093500	CDS	ACA1_093500	NW_004457313.1	560352	562151	R	encoded by transcript ACA1_093500A; zinc finger domain containing protein	complement(join(560352..561126,561241..562151))	Acanthamoeba castellanii str. Neff	14913322
ACA1_093510	CDS	ACA1_093510	NW_004457313.1	562299	565000	D	encoded by transcript ACA1_093510A; glycosyltransferase	join(562299..563150,563302..563379,563500..563609,563722..563830,563914..563984,564170..564236,564319..564456,564593..564747,564838..565000)	Acanthamoeba castellanii str. Neff	14913323
ACA1_093520	CDS	ACA1_093520	NW_004457313.1	565171	567344	R	encoded by transcript ACA1_093520A; serine/threonine kinase	complement(join(565171..565473,565587..565691,565788..565876,565962..566113,566219..566350,566463..566728,566834..566932,567015..567176,567234..567344))	Acanthamoeba castellanii str. Neff	14913104
ACA1_093530	CDS	ACA1_093530	NW_004457313.1	567862	570481	D	encoded by transcript ACA1_093530A; tRNA nucleotidyltransferase	join(567862..568134,568246..568363,568465..568598,568699..568800,568875..569103,569167..569405,569500..569577,569681..569789,569886..570002,570138..570318,570397..570481)	Acanthamoeba castellanii str. Neff	14913105
ACA1_093540	CDS	ACA1_093540	NW_004457313.1	570822	576879	D	encoded by transcript ACA1_093540A; uncharacterized protein	join(570822..571304,571590..571958,572029..572444,572546..572870,572999..573205,573314..573653,573742..574103,574229..574449,574533..575223,575323..575688,575772..576080,576163..576417,576514..576879)	Acanthamoeba castellanii str. Neff	14913211
ACA1_093550	CDS	ACA1_093550	NW_004457313.1	576979	577361	R	encoded by transcript ACA1_093550A; uncharacterized protein	complement(join(576979..577082,577103..577221,577279..577361))	Acanthamoeba castellanii str. Neff	14913212
ACA1_093560	CDS	ACA1_093560	NW_004457313.1	577995	582203	R	encoded by transcript ACA1_093560A; Frizzled/Smoothened family membrane region protein	complement(join(577995..578082,578169..578296,578409..578505,578596..578656,578817..578904,579022..579066,579147..579208,579314..579398,579513..579623,579748..579818,579942..580017,580084..580167,580252..580314,580432..580581,580698..580753,580884..580989,581115..581191,581345..581459,581590..581635,581912..582038,582155..582203))	Acanthamoeba castellanii str. Neff	14913162
ACA1_093570	CDS	ACA1_093570	NW_004457313.1	582387	583638	R	encoded by transcript ACA1_093570A; uncharacterized protein	complement(join(582387..582645,582734..582855,582944..583138,583219..583638))	Acanthamoeba castellanii str. Neff	14913163
ACA1_093580	CDS	ACA1_093580	NW_004457313.1	584765	587349	D	encoded by transcript ACA1_093580A; Fbox domain containing protein	join(584765..585037,585185..586232,586338..586520,586598..586759,586839..587079,587151..587349)	Acanthamoeba castellanii str. Neff	14913167
ACA1_093590	CDS	ACA1_093590	NW_004457313.1	587637	588203	R	encoded by transcript ACA1_093590A; RAS protein	complement(587637..588203)	Acanthamoeba castellanii str. Neff	14913168
ACA1_093600	CDS	ACA1_093600	NW_004457313.1	588585	591543	D	encoded by transcript ACA1_093600A; uncharacterized protein	join(588585..588761,588853..589119,589158..589645,589785..589975,589987..590452,590538..591543)	Acanthamoeba castellanii str. Neff	14913169
ACA1_093610	CDS	ACA1_093610	NW_004457313.1	591809	593272	R	encoded by transcript ACA1_093610A; phospholipase/carboxylesterase	complement(join(591809..592240,592295..592434,592567..592710,592888..593064,593200..593272))	Acanthamoeba castellanii str. Neff	14913170
ACA1_093620	CDS	ACA1_093620	NW_004457313.1	593404	596515	D	encoded by transcript ACA1_093620A; uncharacterized protein	join(593404..593638,593700..593867,593939..594079,594170..594406,594495..594643,594736..596041,596112..596218,596322..596383,596473..596515)	Acanthamoeba castellanii str. Neff	14913108
ACA1_093630	CDS	ACA1_093630	NW_004457313.1	596747	599978	D	encoded by transcript ACA1_093630A; epocide hydrolase domain containing protein	join(596747..596803,596898..597704,597794..597844,597916..598048,598136..598242,598338..598414,598495..598607,598709..598899,598985..599049,599123..599253,599393..599468,599551..599669,599767..599978)	Acanthamoeba castellanii str. Neff	14913109
ACA1_093640	CDS	ACA1_093640	NW_004457313.1	600736	602897	R	encoded by transcript ACA1_093640A; regulator of chromosome condensation (RCC1) repeat domain containing protein	complement(join(600736..600850,600942..601030,601105..601262,601349..601461,601572..601809,601900..601990,602117..602293,602414..602536,602596..602722,602809..602897))	Acanthamoeba castellanii str. Neff	14913179
ACA1_093650	CDS	ACA1_093650	NW_004457313.1	605132	606409	R	encoded by transcript ACA1_093650A; uncharacterized protein	complement(join(<605132..605260,605393..605499,606160..>606409))	Acanthamoeba castellanii str. Neff	14913180
ACA1_093660	CDS	ACA1_093660	NW_004457313.1	607251	607639	R	encoded by transcript ACA1_093660A; uncharacterized protein	complement(join(607251..607357,607453..607639))	Acanthamoeba castellanii str. Neff	14913183
ACA1_093670	CDS	ACA1_093670	NW_004457313.1	608726	609146	R	encoded by transcript ACA1_093670A; uncharacterized protein	complement(<608726..609146)	Acanthamoeba castellanii str. Neff	14913184
ACA1_093680	CDS	ACA1_093680	NW_004457313.1	609841	610667	R	encoded by transcript ACA1_093680A; uncharacterized protein	complement(join(609841..609920,610013..610109,610203..610342,610475..610667))	Acanthamoeba castellanii str. Neff	14913185
ACA1_093690	CDS	ACA1_093690	NW_004457313.1	614929	616317	D	encoded by transcript ACA1_093690A; uncharacterized protein	614929..616317	Acanthamoeba castellanii str. Neff	14913186
ACA1_093700	CDS	ACA1_093700	NW_004457313.1	616732	618141	D	encoded by transcript ACA1_093700A; endo1,3(4)-beta-glucanase, putative	join(616732..616902,617007..617229,617304..617446,617535..617665,617778..617997,618082..618141)	Acanthamoeba castellanii str. Neff	14913276
ACA1_093710	CDS	ACA1_093710	NW_004457313.1	620180	622150	R	encoded by transcript ACA1_093710A; RhoGEF domain containing protein	complement(join(620180..620346,620426..620530,620612..620783,620855..620966,621040..621188,621263..621370,621433..621618,621713..622150))	Acanthamoeba castellanii str. Neff	14913277
ACA1_093720	CDS	ACA1_093720	NW_004457313.1	622925	625953	R	encoded by transcript ACA1_093720A; signal recognition particledocking protein	complement(join(622925..623233,623331..623416,623600..623735,623945..624301,624623..624732,624808..624880,624967..625142,625216..625774,625840..625953))	Acanthamoeba castellanii str. Neff	14913278
ACA1_093730	CDS	ACA1_093730	NW_004457313.1	626414	626896	D	encoded by transcript ACA1_093730A; RNA polymerase subunit	join(626414..626434,626516..626643,626737..626896)	Acanthamoeba castellanii str. Neff	14913134
ACA1_093740	CDS	ACA1_093740	NW_004457313.1	627187	629660	R	encoded by transcript ACA1_093740A; serine/threonine protein kinase	complement(join(627187..627411,627497..627619,627740..627880,628007..628200,628289..628418,628564..628674,628772..628845,628955..629200,629312..629546,629619..629660))	Acanthamoeba castellanii str. Neff	14913135
ACA1_093760	CDS	ACA1_093760	NW_004457313.1	639117	641403	D	encoded by transcript ACA1_093760A; ADPdependent glucokinase	join(639117..639318,639424..639538,639626..639714,639800..639871,640021..640466,640588..640806,640909..641223,641380..641403)	Acanthamoeba castellanii str. Neff	14913254
ACA1_093770	CDS	ACA1_093770	NW_004457313.1	641664	643320	D	encoded by transcript ACA1_093770A; uncharacterized protein	join(641664..641811,641929..642070,642185..642232,642344..642426,642564..642729,642818..642884,643003..643106,643224..643320)	Acanthamoeba castellanii str. Neff	14913255
ACA1_093780	CDS	ACA1_093780	NW_004457313.1	643306	644115	R	encoded by transcript ACA1_093780A; uncharacterized protein	complement(join(643306..643994,644043..644115))	Acanthamoeba castellanii str. Neff	14913256
ACA1_093790	CDS	ACA1_093790	NW_004457313.1	644435	647444	D	encoded by transcript ACA1_093790A; amidohydrolase	join(644435..644501,644597..644759,644871..645012,645114..645215,645301..645474,645633..646006,646105..646176,646271..646367,646644..646715,646789..646934,647019..647100,647158..647312,647438..647444)	Acanthamoeba castellanii str. Neff	14913303
ACA1_093800	CDS	ACA1_093800	NW_004457313.1	647259	648521	R	encoded by transcript ACA1_093800A; PXMP2/4 family protein 3, putative	complement(join(647259..647321,647446..647775,647917..648068,648196..648262,648468..648521))	Acanthamoeba castellanii str. Neff	14913304
ACA1_093810	CDS	ACA1_093810	NW_004457313.1	648851	649766	D	encoded by transcript ACA1_093810A; Ras subfamily protein	join(648851..649006,649188..649766)	Acanthamoeba castellanii str. Neff	14913432
ACA1_093820	CDS	ACA1_093820	NW_004457313.1	650420	651880	R	encoded by transcript ACA1_093820A; uncharacterized protein	complement(650420..651880)	Acanthamoeba castellanii str. Neff	14913433
ACA1_093830	CDS	ACA1_093830	NW_004457313.1	652280	656972	R	encoded by transcript ACA1_093830A; isoleucine-tRNA ligase	complement(join(652280..652459,652540..652720,652871..653032,653132..653327,653440..653631,653735..653939,654041..654345,654475..654798,654889..654987,655093..655360,655524..655609,655687..655821,655891..655944,656027..656226,656346..656415,656492..656564,656637..656812,656942..656972))	Acanthamoeba castellanii str. Neff	14913434
ACA1_093840	CDS	ACA1_093840	NW_004457313.1	657464	662981	D	encoded by transcript ACA1_093840A; regulatory-associated protein of mTOR, putative	join(657464..657472,657543..657734,657836..657914,658020..658102,658198..658554,658657..658838,658900..659166,659261..659695,659786..659987,660103..660297,660389..660540,660667..660791,660906..660992,661148..661339,661434..661589,661701..662158,662258..662524,662629..662819,662897..662981)	Acanthamoeba castellanii str. Neff	14913415
ACA1_093850	CDS	ACA1_093850	NW_004457313.1	663573	665462	D	encoded by transcript ACA1_093850A; fungal Zn(2)-Cys(6) binuclear cluster domain containing protein	join(663573..664083,664181..664285,664386..664666,664752..665186,665316..665462)	Acanthamoeba castellanii str. Neff	14913416
ACA1_093860	CDS	ACA1_093860	NW_004457313.1	665938	668079	D	encoded by transcript ACA1_093860A; leucinerich repeat protein	join(665938..666069,666297..666516,666646..666793,666893..667035,667201..667490,667617..667732,667866..667932,667960..668079)	Acanthamoeba castellanii str. Neff	14913362
ACA1_093870	CDS	ACA1_093870	NW_004457313.1	668190	669619	R	encoded by transcript ACA1_093870A; uncharacterized protein	complement(join(668190..668570,668666..669142,669209..669619))	Acanthamoeba castellanii str. Neff	14913363
ACA1_093880	CDS	ACA1_093880	NW_004457313.1	669810	672397	R	encoded by transcript ACA1_093880A; splicing factor, CC1like subfamily protein	complement(join(669810..669913,670031..670173,670252..670984,671079..671292,671415..671763,671841..671888,672127..672254,672332..672397))	Acanthamoeba castellanii str. Neff	14913150
ACA1_093890	CDS	ACA1_093890	NW_004457313.1	672574	674482	D	encoded by transcript ACA1_093890A; uncharacterized protein	join(672574..672873,672941..672976,673072..673272,673364..673672,673745..673932,674024..674204,674270..674482)	Acanthamoeba castellanii str. Neff	14913151
ACA1_093900	CDS	ACA1_093900	NW_004457313.1	674816	676165	D	encoded by transcript ACA1_093900A; NLR family, CARD domain containing 3, putative	join(674816..674980,675042..675267,675340..675439,675456..675462,675499..675804,675875..675989,676059..676165)	Acanthamoeba castellanii str. Neff	14913152
ACA1_093910	CDS	ACA1_093910	NW_004457313.1	676366	678262	D	encoded by transcript ACA1_093910A; WD repeatcontaining protein	join(676366..676466,676554..676779,676852..676989,677085..677168,677256..677426,677507..677773,677910..678068,678119..678262)	Acanthamoeba castellanii str. Neff	14913244
ACA1_093920	CDS	ACA1_093920	NW_004457313.1	678427	680409	D	encoded by transcript ACA1_093920A; metal cation transporter, ZIP subfamily protein	join(678427..678483,678576..678675,678749..678800,678968..678992,679095..679512,679598..679678,679773..679904,679998..680072,680177..680269,680351..680409)	Acanthamoeba castellanii str. Neff	14913245
ACA1_093930	CDS	ACA1_093930	NW_004457313.1	680740	682375	D	encoded by transcript ACA1_093930A; P21Rho-binding domain containing protein	join(680740..680979,681112..681180,681302..681380,681491..681498,681744..681787,681854..681941,682067..682375)	Acanthamoeba castellanii str. Neff	14913389
ACA1_094040	CDS	ACA1_094040	NW_004457313.1	682586	686417	D	encoded by transcript ACA1_094040A; uncharacterized protein	join(682586..682615,682782..683036,683117..683206,683335..683464,683631..683726,683828..683904,684027..684134,684232..684477,684582..684709,684788..684937,685014..685226,685303..685450,685545..685640,685747..685846,685924..686018,686096..686247,686324..686417)	Acanthamoeba castellanii str. Neff	14913390
ACA1_094050	CDS	ACA1_094050	NW_004457313.1	687009	687717	R	encoded by transcript ACA1_094050A; uncharacterized protein	complement(join(687009..687112,687210..687341,687452..687569,687649..687717))	Acanthamoeba castellanii str. Neff	14913391
ACA1_094060	CDS	ACA1_094060	NW_004457313.1	687926	689420	D	encoded by transcript ACA1_094060A; START domain containing protein	join(687926..688210,688400..688472,688600..688716,688847..688954,689051..689149,689275..689420)	Acanthamoeba castellanii str. Neff	14913377
ACA1_094070	CDS	ACA1_094070	NW_004457313.1	689823	690386	D	encoded by transcript ACA1_094070A; myosin IC light chain, putative	join(689823..689970,690109..690386)	Acanthamoeba castellanii str. Neff	14913378
ACA1_094080	CDS	ACA1_094080	NW_004457313.1	690514	691999	R	encoded by transcript ACA1_094080A; uncharacterized protein	complement(join(690514..690680,690765..691098,691205..691341,691451..691663,691741..691999))	Acanthamoeba castellanii str. Neff	14913565
ACA1_094090	CDS	ACA1_094090	NW_004457313.1	692197	693062	D	encoded by transcript ACA1_094090A; C2 domain containing protein	join(692197..692509,692610..692689,692749..692936,693014..693062)	Acanthamoeba castellanii str. Neff	14913566
ACA1_094100	CDS	ACA1_094100	NW_004457313.1	693292	694038	D	encoded by transcript ACA1_094100A; uncharacterized protein	join(693292..693453,693530..693665,693727..693860,693922..694038)	Acanthamoeba castellanii str. Neff	14913567
ACA1_094110	CDS	ACA1_094110	NW_004457313.1	694195	695065	D	encoded by transcript ACA1_094110A; uncharacterized protein	join(694195..694330,694411..694480,694605..694650,694713..694781,694856..695065)	Acanthamoeba castellanii str. Neff	14913392
ACA1_094120	CDS	ACA1_094120	NW_004457313.1	695168	695837	R	encoded by transcript ACA1_094120A; EF hand domain containing protein	complement(join(695168..695284,695334..695506,695570..695643,695713..695837))	Acanthamoeba castellanii str. Neff	14913393
ACA1_094130	CDS	ACA1_094130	NW_004457313.1	696151	697340	R	encoded by transcript ACA1_094130A; uncharacterized protein	complement(join(696151..696374,696460..696553,696661..696757,696864..697017,697154..697340))	Acanthamoeba castellanii str. Neff	14913394
ACA1_094140	CDS	ACA1_094140	NW_004457313.1	697686	698202	R	encoded by transcript ACA1_094140A; uncharacterized protein	complement(join(697686..697900,698100..698157,698179..698202))	Acanthamoeba castellanii str. Neff	14913314
ACA1_094150	CDS	ACA1_094150	NW_004457313.1	700126	700703	R	encoded by transcript ACA1_094150A; uncharacterized protein	complement(join(700126..700277,700367..700703))	Acanthamoeba castellanii str. Neff	14913315
ACA1_094160	CDS	ACA1_094160	NW_004457313.1	701377	701840	R	encoded by transcript ACA1_094160A; uncharacterized protein	complement(join(701377..701506,701620..701699,701823..701840))	Acanthamoeba castellanii str. Neff	14913316
ACA1_094170	CDS	ACA1_094170	NW_004457313.1	702434	705016	R	encoded by transcript ACA1_094170A; Na+/H+ antiporter	complement(join(702434..702561,702681..702823,702929..703151,703250..703373,703466..703665,703766..703871,703949..704075,704159..704252,704377..704563,704687..705016))	Acanthamoeba castellanii str. Neff	14913206
ACA1_094180	CDS	ACA1_094180	NW_004457313.1	705451	706692	D	encoded by transcript ACA1_094180A; SCPlike extracellular, putative	join(705451..705499,705626..705723,705810..705873,705981..706076,706254..706354,706441..706692)	Acanthamoeba castellanii str. Neff	14913207
ACA1_094190	CDS	ACA1_094190	NW_004457313.1	706963	708179	D	encoded by transcript ACA1_094190A; uncharacterized protein	join(706963..707045,707174..707262,707380..707693,707802..708179)	Acanthamoeba castellanii str. Neff	14913208
ACA1_094200	CDS	ACA1_094200	NW_004457313.1	708365	710038	R	encoded by transcript ACA1_094200A; DHHC zinc finger domain containing protein	complement(join(708365..708399,708501..708677,708775..708889,708959..709089,709110..709218,709401..709453,709539..709665,709775..710038))	Acanthamoeba castellanii str. Neff	14913327
ACA1_094210	CDS	ACA1_094210	NW_004457313.1	710132	712070	R	encoded by transcript ACA1_094210A; transporter, auxin efflux carrier family protein	complement(join(710132..710257,710366..710529,710607..710740,710834..711270,711380..711422,711546..711784,711927..712070))	Acanthamoeba castellanii str. Neff	14913328
ACA1_094230	CDS	ACA1_094230	NW_004457313.1	717300	718146	D	encoded by transcript ACA1_094230A; acetyltransferase, GNAT superfamily protein	join(717300..717419,717510..717642,717753..717842,717953..718146)	Acanthamoeba castellanii str. Neff	14913512
ACA1_094250	CDS	ACA1_094250	NW_004457313.1	724717	731154	R	encoded by transcript ACA1_094250A; ADPribosylation factor subfamily protein	complement(join(724717..724778,724905..724995,725121..725226,725307..725377,725431..725500,725599..725647,725721..725783,725855..725985,726057..726210,726317..726493,726613..726744,726861..726936,727044..727133,727226..727360,727681..727796,727878..728027,728138..728296,728467..728581,728722..728819,728978..729094,729124..729375,729526..729627,729713..729862,729963..730181,730374..730432,730545..730566,730669..730765,731071..731154))	Acanthamoeba castellanii str. Neff	14913514
ACA1_094260	CDS	ACA1_094260	NW_004457313.1	731483	738081	D	encoded by transcript ACA1_094260A; RhoGEF domain containing protein	join(731483..731495,731682..732478,732643..732807,732933..733152,733201..733236,733309..733379,733582..733667,733801..733902,734094..734139,734277..734406,734487..734548,734787..734855,734998..735128,735340..735415,735592..735606,735816..736022,736185..736358,736541..736603,736805..736982,737080..737205,737326..737451,737561..738081)	Acanthamoeba castellanii str. Neff	14913515
ACA1_094280	CDS	ACA1_094280	NW_004457313.1	740913	741566	D	encoded by transcript ACA1_094280A; enhancer of rudimentary family protein	join(740913..740957,741037..741163,741233..741353,741467..741566)	Acanthamoeba castellanii str. Neff	14913287
ACA1_094390	CDS	ACA1_094390	NW_004457313.1	742214	746148	R	encoded by transcript ACA1_094390A; MutS domain V domain containing protein	complement(join(742214..742323,742373..742720,742776..742813,742875..742989,743062..743115,743307..743357,743688..743760,743819..743899,743954..744031,744109..744139,744195..744328,744391..744467,744647..744744,744775..744861,744919..744953,745012..745113,745297..745472,745751..745821,746075..746148))	Acanthamoeba castellanii str. Neff	14913288
ACA1_094400	CDS	ACA1_094400	NW_004457313.1	746480	753094	D	encoded by transcript ACA1_094400A; tetratricopeptide repeat domain containing protein	join(746480..746582,746717..746775,746800..746947,747070..747504,747686..747849,747927..748102,748273..748423,748653..748759,748851..748948,749068..749223,749363..749502,749697..750215,750321..750455,750568..751006,751118..751293,751381..751535,751647..751770,752026..752039,752088..752160,752301..752425,752593..752758,752915..753094)	Acanthamoeba castellanii str. Neff	14913289
ACA1_094510	CDS	ACA1_094510	NW_004457313.1	754649	757321	D	encoded by transcript ACA1_094510A; uncharacterized protein	join(<754649..754717,755439..755779,756011..756155,756313..756522,756698..756830,756902..757000,757029..757321)	Acanthamoeba castellanii str. Neff	14913290
ACA1_094520	CDS	ACA1_094520	NW_004457313.1	758221	761692	D	encoded by transcript ACA1_094520A; uncharacterized protein	join(758221..758423,758508..758658,758727..758859,758952..758998,759095..759966,759994..760052,760254..760379,760405..760852,760946..761020,761140..761692)	Acanthamoeba castellanii str. Neff	14913413
ACA1_094530	CDS	ACA1_094530	NW_004457313.1	763771	765672	R	encoded by transcript ACA1_094530A; uncharacterized protein	complement(join(763771..763984,764063..764177,764258..764345,764469..764531,764615..765085,765196..765360,765382..765430,765527..765672))	Acanthamoeba castellanii str. Neff	14913414
ACA1_094540	CDS	ACA1_094540	NW_004457313.1	765766	766522	D	encoded by transcript ACA1_094540A; uncharacterized protein	join(765766..766326,766445..766522)	Acanthamoeba castellanii str. Neff	14913625
ACA1_094550	CDS	ACA1_094550	NW_004457313.1	766911	768979	D	encoded by transcript ACA1_094550A; uncharacterized protein	join(766911..767167,767189..767452,767533..767726,767840..768237,768368..768979)	Acanthamoeba castellanii str. Neff	14913626
ACA1_094560	CDS	ACA1_094560	NW_004457313.1	769083	773634	R	encoded by transcript ACA1_094560A; Pep3/Vps18/deep orange family protein	complement(join(769083..769205,769349..770152,770460..770561,770646..770961,771426..772326,772525..772603,772748..772911,772926..772933,773154..773253,773364..773634))	Acanthamoeba castellanii str. Neff	14913627
ACA1_094570	CDS	ACA1_094570	NW_004457313.1	774066	776105	D	encoded by transcript ACA1_094570A; regulator of chromosome condensation (RCC1) repeat domain containing protein	join(774066..774282,774431..774669,775295..775389,775502..775596,775712..775869,775944..776105)	Acanthamoeba castellanii str. Neff	14913291
ACA1_094680	CDS	ACA1_094680	NW_004457313.1	776190	776850	R	encoded by transcript ACA1_094680A; ribosomal protein L11, domain containing protein	complement(join(776190..776404,776468..776737,776814..776850))	Acanthamoeba castellanii str. Neff	14913292
ACA1_094690	CDS	ACA1_094690	NW_004457313.1	777323	785524	D	encoded by transcript ACA1_094690A; Fanconi anemia complementation group D2 family protein	join(777323..777497,777576..777726,777813..777926,778091..778274,778452..778664,778793..778868,779019..779083,779178..779228,779398..779712,779887..780054,780200..780307,780420..780565,780630..780766,780895..781031,782377..782429,782519..782588,782710..782784,782896..783006,783203..783355,783535..783744,783861..784073,784346..784591,784785..784964,785077..785169,785300..785524)	Acanthamoeba castellanii str. Neff	14913293
ACA1_094900	CDS	ACA1_094900	NW_004457313.1	785673	786978	D	encoded by transcript ACA1_094900A; uncharacterized protein	join(785673..786683,786799..786978)	Acanthamoeba castellanii str. Neff	14913586
ACA1_094910	CDS	ACA1_094910	NW_004457313.1	787227	789529	R	encoded by transcript ACA1_094910A; deoxyhypusine synthase	complement(join(787227..787343,787461..787544,787605..787750,787963..788068,788241..788327,788510..788601,788758..789055,789265..789357,789446..789529))	Acanthamoeba castellanii str. Neff	14913195
ACA1_094920	CDS	ACA1_094920	NW_004457313.1	790104	795782	D	encoded by transcript ACA1_094920A; Ankyrin repeat containing protein	join(790104..791279,791467..793194,793342..793439,793568..793739,793867..793986,794132..794266,794430..794873,794972..795136,795282..795782)	Acanthamoeba castellanii str. Neff	14913196
ACA1_094930	CDS	ACA1_094930	NW_004457313.1	796094	796890	D	encoded by transcript ACA1_094930A; ribosomal protein L6, putative	join(796094..796139,796238..796449,796515..796725,796790..796890)	Acanthamoeba castellanii str. Neff	14913197
ACA1_094940	CDS	ACA1_094940	NW_004457313.1	797011	798282	R	encoded by transcript ACA1_094940A; cell cycle control proteinrelated, putative	complement(join(797011..797328,797422..797679,797798..797972,798076..798155,798226..798282))	Acanthamoeba castellanii str. Neff	14913539
ACA1_094950	CDS	ACA1_094950	NW_004457313.1	798480	802348	R	encoded by transcript ACA1_094950A; protein kinase domain containing protein	complement(join(798480..798626,798736..798943,799056..799164,799274..799445,799566..799676,799766..800013,800165..800244,800370..800451,800565..800854,800955..801598,801875..802348))	Acanthamoeba castellanii str. Neff	14913540
ACA1_095060	CDS	ACA1_095060	NW_004457313.1	802549	804720	R	encoded by transcript ACA1_095060A; Sideroflexin 5, putative	complement(join(802549..802634,802715..802789,802897..803003,803066..803188,803292..803362,803473..803570,803660..803777,803883..804001,804097..804206,804359..804428,804666..804720))	Acanthamoeba castellanii str. Neff	14913541
ACA1_095070	CDS	ACA1_095070	NW_004457313.1	804902	807009	D	encoded by transcript ACA1_095070A; uncharacterized protein	join(804902..805055,805447..805783,806045..806426,806620..806721,806845..807009)	Acanthamoeba castellanii str. Neff	14913347
ACA1_095080	CDS	ACA1_095080	NW_004457313.1	807253	809006	R	encoded by transcript ACA1_095080A; plastin 3 (T isoform), putative	complement(join(807253..808434,808561..808860,808944..809006))	Acanthamoeba castellanii str. Neff	14913348
ACA1_095090	CDS	ACA1_095090	NW_004457313.1	809454	811677	D	encoded by transcript ACA1_095090A; tyrosine-tRNA ligase	join(809454..809825,809907..810149,810264..810332,810473..810577,810681..810833,810987..811069,811146..811288,811403..811677)	Acanthamoeba castellanii str. Neff	14913198
ACA1_095100	CDS	ACA1_095100	NW_004457313.1	811826	813351	R	encoded by transcript ACA1_095100A; UTP23, small subunit (SSU) processome component family protein	complement(join(811826..812248,812427..812614,812740..812820,812956..813189,813300..813351))	Acanthamoeba castellanii str. Neff	14913199
ACA1_095110	CDS	ACA1_095110	NW_004457313.1	813519	814707	R	encoded by transcript ACA1_095110A; uncharacterized protein	complement(join(813519..814305,814463..814707))	Acanthamoeba castellanii str. Neff	14913200
ACA1_095220	CDS	ACA1_095220	NW_004457313.1	814885	817261	R	encoded by transcript ACA1_095220A; protein kinase domain containing protein	complement(join(814885..814956,815007..815066,815223..815360,815478..815581,815677..815769,815892..815930,816166..816295,816400..816495,816561..816680,816763..816828,816929..817261))	Acanthamoeba castellanii str. Neff	14913419
ACA1_095230	CDS	ACA1_095230	NW_004457313.1	817677	820216	R	encoded by transcript ACA1_095230A; Ankyrin repeat containing Ras association (RalGDS/AF6) domain containing protein	complement(join(817677..817761,817887..817983,818086..818257,818359..818450,818599..818715,818913..819080,819183..819296,819376..819457,819545..819632,819796..819908,820046..820216))	Acanthamoeba castellanii str. Neff	14913420
ACA1_095240	CDS	ACA1_095240	NW_004457313.1	820578	822705	D	encoded by transcript ACA1_095240A; RNA recognition motif domain containing protein	join(820578..820694,820772..820801,820907..820946,821150..821612,821747..821931,822188..822349,822450..822560,822668..822705)	Acanthamoeba castellanii str. Neff	14913421
ACA1_095250	CDS	ACA1_095250	NW_004457313.1	823034	823695	D	encoded by transcript ACA1_095250A; Cytochrome c oxidase	join(823034..823151,823328..823695)	Acanthamoeba castellanii str. Neff	14913584
ACA1_095260	CDS	ACA1_095260	NW_004457313.1	823857	825191	R	encoded by transcript ACA1_095260A; Fbox domain containing protein	complement(join(823857..824126,824216..824466,824552..824660,824751..824841,824962..825103,825179..825191))	Acanthamoeba castellanii str. Neff	14913585
ACA1_095270	CDS	ACA1_095270	NW_004457313.1	825445	826478	R	encoded by transcript ACA1_095270A; uncharacterized protein	complement(join(825445..825557,825679..825850,825964..826024,826116..826308,826379..826478))	Acanthamoeba castellanii str. Neff	14913545
ACA1_095280	CDS	ACA1_095280	NW_004457313.1	826727	827700	D	encoded by transcript ACA1_095280A; biotin/lipoate A/B protein ligase family protein	join(826727..826981,827169..827420,827527..827700)	Acanthamoeba castellanii str. Neff	14913546
ACA1_095290	CDS	ACA1_095290	NW_004457313.1	828144	830391	D	encoded by transcript ACA1_095290A; biotin-acetyl-CoA-carboxylase ligase	join(828144..828150,828187..828336,828461..828557,828719..828861,828941..828996,829128..829229,829503..829794,829885..829918,830019..830106,830209..830391)	Acanthamoeba castellanii str. Neff	14913547
ACA1_095400	CDS	ACA1_095400	NW_004457313.1	830482	833777	R	encoded by transcript ACA1_095400A; cytochrome p450 superfamily protein	complement(join(830482..830574,830685..830756,830840..831034,831266..831347,831439..831539,831635..831679,831788..831824,831982..832069,832213..832330,832364..832373,832427..832526,832614..832698,832793..832907,832995..833037,833160..833271,833395..833502,833715..833777))	Acanthamoeba castellanii str. Neff	14913279
ACA1_095410	CDS	ACA1_095410	NW_004457313.1	833918	835922	R	encoded by transcript ACA1_095410A; oxidoreductase, short chain dehydrogenase/reductase superfamily protein	complement(join(833918..833936,834169..834291,834367..834447,834556..834617,834736..834825,835022..835143,835281..835342,835443..835515,835581..835669,835885..835922))	Acanthamoeba castellanii str. Neff	14913280
ACA1_095420	CDS	ACA1_095420	NW_004457313.1	837488	839707	D	encoded by transcript ACA1_095420A; uncharacterized protein	join(837488..838912,839243..839707)	Acanthamoeba castellanii str. Neff	14913501
ACA1_095530	CDS	ACA1_095530	NW_004457313.1	839851	840777	D	encoded by transcript ACA1_095530A; uncharacterized protein	join(839851..840412,840502..840580,840666..840777)	Acanthamoeba castellanii str. Neff	14913502
ACA1_095540	CDS	ACA1_095540	NW_004457313.1	840909	842370	R	encoded by transcript ACA1_095540A; Fbox domain containing protein	complement(join(840909..841240,841311..841417,841491..841615,841690..842043,842149..842370))	Acanthamoeba castellanii str. Neff	14913503
ACA1_095550	CDS	ACA1_095550	NW_004457313.1	842795	847325	D	encoded by transcript ACA1_095550A; ABC transporter, ATPbinding domain containing protein	join(842795..843061,843209..843313,843549..843737,843903..844035,844143..844276,844384..844545,844612..844679,844788..844916,845019..845213,845336..845487,845607..846028,846114..846146,846332..846574,846644..846824,847015..847325)	Acanthamoeba castellanii str. Neff	14913484
ACA1_095560	CDS	ACA1_095560	NW_004457313.1	847453	849412	D	encoded by transcript ACA1_095560A; translation factor pelota, putative	join(847453..847586,847718..847868,847956..848210,848335..848461,848581..848678,848776..848901,849020..849191,849270..849412)	Acanthamoeba castellanii str. Neff	14913485
ACA1_095570	CDS	ACA1_095570	NW_004457313.1	849555	851190	D	encoded by transcript ACA1_095570A; ATP binding protein	join(849555..849561,849746..850124,850220..850586,850672..850754,850877..851037,851105..851190)	Acanthamoeba castellanii str. Neff	14913250
ACA1_095580	CDS	ACA1_095580	NW_004457313.1	851523	852898	D	encoded by transcript ACA1_095580A; serine/threonine kinase	join(851523..851667,851860..852028,852163..852898)	Acanthamoeba castellanii str. Neff	14913251
ACA1_095590	CDS	ACA1_095590	NW_004457313.1	853220	855377	R	encoded by transcript ACA1_095590A; tRNAdihydrouridine synthase 1-like protein	complement(join(853220..853330,853399..853498,853577..853825,853917..854112,854254..854346,854473..854545,854670..854718,854845..854954,855066..855377))	Acanthamoeba castellanii str. Neff	14913252
ACA1_095600	CDS	ACA1_095600	NW_004457313.1	855628	856550	D	encoded by transcript ACA1_095600A; ran small gtpase family protein	join(855628..855844,855939..856039,856155..856287,856366..856550)	Acanthamoeba castellanii str. Neff	14913631
ACA1_095610	CDS	ACA1_095610	NW_004457313.1	856702	857729	D	encoded by transcript ACA1_095610A; GTPbinding protein	join(856702..856921,857044..857163,857315..857473,857542..857729)	Acanthamoeba castellanii str. Neff	14913632
ACA1_095620	CDS	ACA1_095620	NW_004457313.1	857776	864254	R	encoded by transcript ACA1_095620A; uncharacterized protein	complement(join(857776..857994,858079..858228,858337..858629,858707..858777,858872..858987,859018..859092,859224..859296,859411..859596,859668..859772,859893..860036,860244..860376,860469..860901,860988..861143,861215..861565,861669..862025,862105..862374,862479..862625,862773..862843,863100..863311,863468..863552,863672..863981,864225..864254))	Acanthamoeba castellanii str. Neff	14913633
ACA1_095630	CDS	ACA1_095630	NW_004457313.1	864707	868927	D	encoded by transcript ACA1_095630A; phosphoethanolamine Nmethyltransferase, putative	join(864707..865274,865389..865516,865615..866026,866123..867220,867275..867429,867506..868454,868560..868927)	Acanthamoeba castellanii str. Neff	14913614
ACA1_095640	CDS	ACA1_095640	NW_004457313.1	869104	869574	R	encoded by transcript ACA1_095640A; uncharacterized protein	complement(join(869104..869211,869320..869574))	Acanthamoeba castellanii str. Neff	14913294
ACA1_095650	CDS	ACA1_095650	NW_004457313.1	869822	870106	R	encoded by transcript ACA1_095650A; uncharacterized protein	complement(869822..870106)	Acanthamoeba castellanii str. Neff	14913295
ACA1_095660	CDS	ACA1_095660	NW_004457313.1	870808	873119	D	encoded by transcript ACA1_095660A; Poly(ADPribose) polymerase catalytic domain containing protein	join(870808..871483,871570..871791,871896..872038,872127..872223,872346..872504,872601..872695,872859..872991,873070..873119)	Acanthamoeba castellanii str. Neff	14913296
ACA1_095670	CDS	ACA1_095670	NW_004457313.1	875791	878143	R	encoded by transcript ACA1_095670A; Dlactate dehydrogenase 2, mitochondrial precursor, putative	complement(join(875791..875922,876008..876126,876213..876337,876427..876554,876613..876749,876832..876925,877001..877118,877214..877336,877424..877506,877605..877678,877783..877913,877980..878143))	Acanthamoeba castellanii str. Neff	14913297
ACA1_095680	CDS	ACA1_095680	NW_004457313.1	878645	881390	D	encoded by transcript ACA1_095680A; uncharacterized protein	join(878645..878735,878802..878936,879021..879073,879178..879241,879330..879467,879532..879593,879665..879926,879992..880066,880171..880247,880359..880496,880580..880731,880851..881004,881087..881189,881257..881390)	Acanthamoeba castellanii str. Neff	14913497
ACA1_095690	CDS	ACA1_095690	NW_004457313.1	882126	885977	D	encoded by transcript ACA1_095690A; uncharacterized protein	join(882126..882232,882294..882400,882488..882589,882689..882871,882946..883118,883194..883326,883430..883753,883838..883909,884021..884183,884260..884344,884415..884510,884581..884661,884697..884811,884908..885047,885143..885258,885336..885411,885503..885684,885773..885977)	Acanthamoeba castellanii str. Neff	14913498
ACA1_095700	CDS	ACA1_095700	NW_004457313.1	886114	890288	D	encoded by transcript ACA1_095700A; uncharacterized protein	join(886114..886262,886384..886553,886678..886862,887015..887141,887311..887396,887542..887669,887788..887877,888141..888201,888306..888526,888597..888892,888972..889048,889125..889266,889335..889486,889604..889709,889817..889881,889948..890031,890136..890288)	Acanthamoeba castellanii str. Neff	14913194
ACA1_095710	CDS	ACA1_095710	NW_004457313.1	890406	893270	R	encoded by transcript ACA1_095710A; uncharacterized protein	complement(join(890406..890570,890659..890875,890957..891141,891239..891436,891520..892260,892330..892430,892520..892730,892826..892906,892981..893113,893215..893270))	Acanthamoeba castellanii str. Neff	14913345
ACA1_095720	CDS	ACA1_095720	NW_004457313.1	893470	897449	D	encoded by transcript ACA1_095720A; uncharacterized protein	join(<893470..893505,893791..893933,894013..894122,894235..894417,894503..894675,894765..894912,894990..895167,895188..895318,895385..895441,895550..895658,895817..895901,896013..896108,896196..896400,896472..896611,896757..896797,896895..897152,897260..897449)	Acanthamoeba castellanii str. Neff	14913346
ACA1_095730	CDS	ACA1_095730	NW_004457313.1	897574	898327	D	encoded by transcript ACA1_095730A; Fbox domain containing protein	join(897574..897698,897773..897863,897950..898055,898149..898327)	Acanthamoeba castellanii str. Neff	14913417
ACA1_095740	CDS	ACA1_095740	NW_004457313.1	898415	898926	R	encoded by transcript ACA1_095740A; carrier superfamily protein	complement(join(898415..898549,898684..898773,898888..898926))	Acanthamoeba castellanii str. Neff	14913418
ACA1_095750	CDS	ACA1_095750	NW_004457313.1	899017	900262	R	encoded by transcript ACA1_095750A; mitochondrial carrier protein	complement(join(899017..899118,899187..899294,899387..899439,899533..899672,899777..899821,899916..900046,900164..900262))	Acanthamoeba castellanii str. Neff	14913601
ACA1_095760	CDS	ACA1_095760	NW_004457313.1	900388	902021	D	encoded by transcript ACA1_095760A; Fbox domain containing protein	join(900388..900502,900590..900724,900804..900885,900971..901042,901551..901633,901727..901797,901875..902021)	Acanthamoeba castellanii str. Neff	14913602
ACA1_095770	CDS	ACA1_095770	NW_004457313.1	902058	904715	R	encoded by transcript ACA1_095770A; transporter, major facilitator subfamily protein	complement(join(902058..902180,902246..902367,902550..902619,902692..902847,902949..903088,903171..903325,903487..903587,903677..903776,903867..903915,903994..904096,904231..904352,904424..904715))	Acanthamoeba castellanii str. Neff	14913603
ACA1_095780	CDS	ACA1_095780	NW_004457313.1	904832	907510	R	encoded by transcript ACA1_095780A; disrupted in renal carcinoma protein 2 family protein	complement(join(904832..904995,905446..905536,905622..905686,905911..905985,906065..906219,906324..906424,906505..906604,906730..906778,906873..906975,907045..907166,907264..907510))	Acanthamoeba castellanii str. Neff	14913383
ACA1_095890	CDS	ACA1_095890	NW_004457313.1	907584	908220	R	encoded by transcript ACA1_095890A; ribosomal protein L27, putative	complement(join(907584..907637,907828..908220))	Acanthamoeba castellanii str. Neff	14913384
ACA1_095900	CDS	ACA1_095900	NW_004457313.1	908400	909962	D	encoded by transcript ACA1_095900A; uncharacterized protein	join(908400..908522,908628..908716,908886..909246,909314..909683,909805..909962)	Acanthamoeba castellanii str. Neff	14913213
ACA1_095910	CDS	ACA1_095910	NW_004457313.1	910122	912089	D	encoded by transcript ACA1_095910A; uncharacterized protein	910122..912089	Acanthamoeba castellanii str. Neff	14913214
ACA1_095920	CDS	ACA1_095920	NW_004457313.1	912363	914034	D	encoded by transcript ACA1_095920A; uncharacterized protein	join(912363..912529,912685..912791,912871..912927,913023..913205,913303..913475,913609..914034)	Acanthamoeba castellanii str. Neff	14913215
ACA1_095930	CDS	ACA1_095930	NW_004457313.1	914054	915032	D	encoded by transcript ACA1_095930A; uncharacterized protein	join(914054..914165,914296..914370,914465..914666,914781..914865,914937..>915032)	Acanthamoeba castellanii str. Neff	14913525
ACA1_095940	CDS	ACA1_095940	NW_004457313.1	915129	916535	D	encoded by transcript ACA1_095940A; uncharacterized protein	join(915129..915342,915457..915575,915674..915789,915859..915934,916036..916217,916355..916535)	Acanthamoeba castellanii str. Neff	14913526
ACA1_095950	CDS	ACA1_095950	NW_004457313.1	916704	918029	R	encoded by transcript ACA1_095950A; uncharacterized protein	complement(916704..918029)	Acanthamoeba castellanii str. Neff	14913527
ACA1_095960	CDS	ACA1_095960	NW_004457313.1	918169	922313	R	encoded by transcript ACA1_095960A; uncharacterized protein	complement(join(918169..918343,918452..918633,918740..918815,918982..919097,919197..919342,919452..919656,919769..919864,919936..920020,920106..920331,920465..920570,920671..920819,920924..921056,921202..921374,921464..921646,921732..921827,921960..922066,922177..922313))	Acanthamoeba castellanii str. Neff	14913339
ACA1_095970	CDS	ACA1_095970	NW_004457313.1	922648	924498	R	encoded by transcript ACA1_095970A; translation elongation factor EF1, subunit alpha, putative	complement(join(922648..922771,922879..923270,923347..923472,923540..923711,923806..923954,924025..924169,924248..924498))	Acanthamoeba castellanii str. Neff	14913340
ACA1_095980	CDS	ACA1_095980	NW_004457313.1	925341	926183	R	encoded by transcript ACA1_095980A; small Gprotein	complement(join(925341..925629,925711..925779,925857..925960,926091..926183))	Acanthamoeba castellanii str. Neff	14913341
ACA1_095990	CDS	ACA1_095990	NW_004457313.1	926638	933325	R	encoded by transcript ACA1_095990A; GTPaseactivator protein for Ras-like GTPase	complement(join(926638..927110,927366..928185,928197..928430,928527..928656,928779..928858,928929..929018,929138..929229,929293..929359,929452..929530,929584..929699,929825..929982,930099..930231,930370..930507,930605..930707,930839..930960,931055..931153,931236..931355,931419..931559,931651..931725,931798..932175,932282..933325))	Acanthamoeba castellanii str. Neff	14913221
ACA1_096000	CDS	ACA1_096000	NW_004457313.1	933928	936338	R	encoded by transcript ACA1_096000A; uncharacterized protein	complement(join(933928..934342,934443..934545,934610..934753,934865..934950,935047..935156,935253..935313,935424..935531,935562..935646,935779..935841,935952..936027,936095..936165,936227..936338))	Acanthamoeba castellanii str. Neff	14913222
ACA1_096010	CDS	ACA1_096010	NW_004457313.1	936662	937503	R	encoded by transcript ACA1_096010A; Autophagyrelated protein 12, putative	complement(join(936662..936721,936834..936896,936977..937069,937195..937238,937301..937321,937422..937503))	Acanthamoeba castellanii str. Neff	14913358
ACA1_096020	CDS	ACA1_096020	NW_004457313.1	937819	938101	D	encoded by transcript ACA1_096020A; uncharacterized protein	join(937819..937972,938049..938101)	Acanthamoeba castellanii str. Neff	14913359
ACA1_096030	CDS	ACA1_096030	NW_004457313.1	938180	938892	R	encoded by transcript ACA1_096030A; Fbox domain containing protein	complement(join(938180..938238,938298..938445,938540..938627,938717..938892))	Acanthamoeba castellanii str. Neff	14913424
ACA1_096040	CDS	ACA1_096040	NW_004457313.1	939101	939422	R	encoded by transcript ACA1_096040A; uncharacterized protein	complement(join(939101..939222,939335..>939422))	Acanthamoeba castellanii str. Neff	14913425
ACA1_096150	CDS	ACA1_096150	NW_004457313.1	940628	944184	D	encoded by transcript ACA1_096150A; RhoGEF domain containing protein	join(940628..941800,941923..941978,942086..942191,942295..942384,942543..942614,942781..942819,942919..943092,943192..943939,944057..944184)	Acanthamoeba castellanii str. Neff	14913426
ACA1_096160	CDS	ACA1_096160	NW_004457313.1	944544	950028	R	encoded by transcript ACA1_096160A; uncharacterized protein	complement(join(944544..945883,945995..946982,947076..947483,947647..947855,948079..948129,948603..948761,948837..949035,949278..949430,949849..950028))	Acanthamoeba castellanii str. Neff	14913307
ACA1_096170	CDS	ACA1_096170	NW_004457313.1	951262	955038	D	encoded by transcript ACA1_096170A; uncharacterized protein	join(951262..951542,951614..952106,952153..953248,953343..953611,953724..953886,953969..954165,954257..954382,954586..955038)	Acanthamoeba castellanii str. Neff	14913308
ACA1_096180	CDS	ACA1_096180	NW_004457313.1	956414	958795	D	encoded by transcript ACA1_096180A; Helixloop-helix DNA-binding domain containing protein	join(956414..956969,957566..957617,957725..957848,958106..958795)	Acanthamoeba castellanii str. Neff	14913651
ACA1_096200	CDS	ACA1_096200	NW_004457313.1	961251	963056	R	encoded by transcript ACA1_096200A; uncharacterized protein	complement(join(961251..962507,962567..962722,962787..962892,962959..963056))	Acanthamoeba castellanii str. Neff	14913653
ACA1_096210	CDS	ACA1_096210	NW_004457313.1	963290	963625	R	encoded by transcript ACA1_096210A; uncharacterized protein	complement(963290..963625)	Acanthamoeba castellanii str. Neff	14913654
ACA1_096220	CDS	ACA1_096220	NW_004457313.1	963794	966791	D	encoded by transcript ACA1_096220A; polynucleotide adenylyltransferase	join(963794..963883,963954..964272,964329..964711,964781..964899,964967..965053,965113..965210,965286..965352,965433..966008,966130..966215,966271..966354,966367..966791)	Acanthamoeba castellanii str. Neff	14913611
ACA1_096230	CDS	ACA1_096230	NW_004457313.1	967257	970495	D	encoded by transcript ACA1_096230A; transcriptional regulator, putative	join(967257..967343,967470..967556,967650..967791,967899..967955,968030..968158,968247..968444,968555..968619,968693..968776,968867..968949,969109..969248,969323..969399,969486..969590,969662..969908,970005..970120,970246..970332,970403..970495)	Acanthamoeba castellanii str. Neff	14913612
ACA1_096240	CDS	ACA1_096240	NW_004457313.1	970572	971403	D	encoded by transcript ACA1_096240A; transcriptional regulator, putative	join(970572..970706,970820..970922,970994..971050,971127..971214,971343..971403)	Acanthamoeba castellanii str. Neff	14913613
ACA1_096250	CDS	ACA1_096250	NW_004457313.1	972478	974168	D	encoded by transcript ACA1_096250A; uncharacterized protein	join(972478..973280,973370..974168)	Acanthamoeba castellanii str. Neff	14913570
ACA1_096260	CDS	ACA1_096260	NW_004457313.1	974218	976730	R	encoded by transcript ACA1_096260A; polysaccharide lyase	complement(join(974218..975829,975911..976542,976683..>976730))	Acanthamoeba castellanii str. Neff	14913571
ACA1_096270	CDS	ACA1_096270	NW_004457313.1	977113	977652	D	encoded by transcript ACA1_096270A; uncharacterized protein	join(977113..977296,977405..977652)	Acanthamoeba castellanii str. Neff	14913113
ACA1_096280	CDS	ACA1_096280	NW_004457313.1	977767	980361	R	encoded by transcript ACA1_096280A; uncharacterized protein	complement(join(977767..978483,978780..978872,978964..979130,979212..979385,979469..979849,980010..980361))	Acanthamoeba castellanii str. Neff	14913114
ACA1_096290	CDS	ACA1_096290	NW_004457313.1	980975	982144	R	encoded by transcript ACA1_096290A; bucentaur or craniofacial development domain containing protein	complement(join(980975..981086,981164..981316,981419..981556,981640..981721,981793..982020,982117..982144))	Acanthamoeba castellanii str. Neff	14913115
ACA1_096300	CDS	ACA1_096300	NW_004457313.1	982672	983469	D	encoded by transcript ACA1_096300A; uncharacterized protein	982672..983469	Acanthamoeba castellanii str. Neff	14913283
ACA1_096310	CDS	ACA1_096310	NW_004457313.1	983612	985626	R	encoded by transcript ACA1_096310A; DnaK family protein	complement(join(983612..984475,984502..984882,984981..985436,985462..985626))	Acanthamoeba castellanii str. Neff	14913284
ACA1_096320	CDS	ACA1_096320	NW_004457313.1	986013	987832	D	encoded by transcript ACA1_096320A; glycosylase	join(986013..986183,986352..986508,986584..986761,986845..986909,986982..987091,987176..987294,987364..987462,987586..987674,987741..987832)	Acanthamoeba castellanii str. Neff	14913285
ACA1_096330	CDS	ACA1_096330	NW_004457313.1	988231	990854	D	encoded by transcript ACA1_096330A; NADH oxidoreductase (quinone), F subunit	join(988231..988356,988448..988596,988756..988889,988994..989068,989156..989218,989307..989431,989512..989656,989745..989883,989967..990083,990301..990430,990542..990633,990740..990854)	Acanthamoeba castellanii str. Neff	14913286
ACA1_096340	CDS	ACA1_096340	NW_004457313.1	991151	991456	R	encoded by transcript ACA1_096340A; uncharacterized protein	complement(join(991151..991349,991449..991456))	Acanthamoeba castellanii str. Neff	14913138
ACA1_096350	CDS	ACA1_096350	NW_004457313.1	992059	992424	D	encoded by transcript ACA1_096350A; cystatin, putative	join(992059..992199,992275..992424)	Acanthamoeba castellanii str. Neff	14913139
ACA1_096360	CDS	ACA1_096360	NW_004457313.1	992657	998056	R	encoded by transcript ACA1_096360A; RhoGEF domain containing protein	complement(join(992657..992878,992997..993122,993235..993384,993497..993618,993742..993981,994069..994179,994300..994392,994529..994679,994786..995238,995333..995430,995529..995685,995775..995879,995970..996143,996245..996314,996400..996461,996541..996950,997297..997395,997514..997619,997702..997782,997848..997978,998038..998056))	Acanthamoeba castellanii str. Neff	14913116
ACA1_096370	CDS	ACA1_096370	NW_004457313.1	999407	1000660	D	encoded by transcript ACA1_096370A; zinc finger, c2h2 type domain containing protein	999407..1000660	Acanthamoeba castellanii str. Neff	14913117
ACA1_096380	CDS	ACA1_096380	NW_004457313.1	1000764	1001360	R	encoded by transcript ACA1_096380A; uncharacterized protein	complement(1000764..1001360)	Acanthamoeba castellanii str. Neff	14913232
ACA1_096390	CDS	ACA1_096390	NW_004457313.1	1002021	1003667	R	encoded by transcript ACA1_096390A; Ras subfamily protein	complement(join(1002021..1002439,1002567..1002663,1002772..1003098,1003210..1003333,1003481..1003539,1003635..1003667))	Acanthamoeba castellanii str. Neff	14913233
ACA1_096400	CDS	ACA1_096400	NW_004457313.1	1004132	1005660	D	encoded by transcript ACA1_096400A; ubiquinone/menaquinone biosynthesis methyltransferase	join(1004132..1004286,1004404..1004534,1004609..1004659,1004735..1004832,1004907..1005006,1005064..1005120,1005221..1005348,1005420..1005516,1005575..1005660)	Acanthamoeba castellanii str. Neff	14913234
ACA1_096410	CDS	ACA1_096410	NW_004457313.1	1005725	1006840	R	encoded by transcript ACA1_096410A; uncharacterized protein	complement(join(1005725..1005900,1005993..1006084,1006175..1006319,1006403..1006556,1006628..1006840))	Acanthamoeba castellanii str. Neff	14913235
ACA1_096420	CDS	ACA1_096420	NW_004457313.1	1007376	1008290	R	encoded by transcript ACA1_096420A; GTPbinding nuclear protein Ran, putative	complement(join(1007376..1007572,1007658..1007810,1007895..1008014,1008095..1008290))	Acanthamoeba castellanii str. Neff	14913643
ACA1_096430	CDS	ACA1_096430	NW_004457313.1	1008619	1010619	R	encoded by transcript ACA1_096430A; GntR family transcriptional regulator, putative	complement(join(1008619..1008993,1009051..1009160,1009263..1009379,1009517..1009673,1009758..1009859,1009922..1010117,1010306..1010361,1010590..1010619))	Acanthamoeba castellanii str. Neff	14913644
ACA1_096440	CDS	ACA1_096440	NW_004457313.1	1010754	1014663	D	encoded by transcript ACA1_096440A; RhoGAP domain containing protein	join(1010754..1010778,1011069..1011171,1011237..1011284,1011383..1011461,1011598..1011822,1011894..1011949,1012270..1012370,1012455..1012558,1012700..1012763,1012877..1012999,1013091..1013275,1013351..1013431,1013502..1013571,1013658..1013756,1013886..1013990,1014119..1014233,1014552..1014663)	Acanthamoeba castellanii str. Neff	14913381
ACA1_096450	CDS	ACA1_096450	NW_004457313.1	1015726	1016520	D	encoded by transcript ACA1_096450A; uncharacterized protein	1015726..1016520	Acanthamoeba castellanii str. Neff	14913382
ACA1_096460	CDS	ACA1_096460	NW_004457313.1	1017170	1019410	R	encoded by transcript ACA1_096460A; PH domain containing protein	complement(join(1017170..1017344,1017411..1017487,1017615..1017772,1017839..1017931,1017973..1018104,1018189..1019410))	Acanthamoeba castellanii str. Neff	14913559
ACA1_096470	CDS	ACA1_096470	NW_004457313.1	1019712	1022938	R	encoded by transcript ACA1_096470A; dual specificity phosphatase, catalytic domain containing protein	complement(join(1019712..1020893,1020990..1021098,1021184..1021263,1021379..1021502,1021670..1021803,1021895..1022003,1022095..1022195,1022318..1022363,1022439..1022589,1022671..1022776,1022864..1022938))	Acanthamoeba castellanii str. Neff	14913560
ACA1_096480	CDS	ACA1_096480	NW_004457313.1	1024509	1026855	R	encoded by transcript ACA1_096480A; RhoGEF domain containing protein	complement(join(1024509..1024531,1024603..1024959,1025059..1025127,1025206..1025365,1025446..1025523,1025604..1025702,1025797..1025862,1025935..1026024,1026102..1026206,1026275..1026383,1026456..1026550,1026646..1026740,1026825..>1026855))	Acanthamoeba castellanii str. Neff	14913561
ACA1_096490	CDS	ACA1_096490	NW_004457313.1	1027387	1028859	D	encoded by transcript ACA1_096490A; uncharacterized protein	join(1027387..1028141,1028245..1028307,1028385..1028508,1028617..1028859)	Acanthamoeba castellanii str. Neff	14913224
ACA1_096500	CDS	ACA1_096500	NW_004457313.1	1028997	1031165	R	encoded by transcript ACA1_096500A; cytochrome p450 superfamily protein	complement(join(1028997..1029598,1029711..1030592,1030681..1030799,1030927..1031165))	Acanthamoeba castellanii str. Neff	14913225
ACA1_096510	CDS	ACA1_096510	NW_004457313.1	1031834	1032114	R	encoded by transcript ACA1_096510A; uncharacterized protein	complement(<1031834..1032114)	Acanthamoeba castellanii str. Neff	14913465
ACA1_096520	CDS	ACA1_096520	NW_004457313.1	1032292	1034852	R	encoded by transcript ACA1_096520A; cytochrome p450 superfamily protein	complement(join(1032292..1032830,1032917..1032991,1033147..1033373,1033468..1033555,1033633..1034256,1034329..1034447,1034506..1034852))	Acanthamoeba castellanii str. Neff	14913466
ACA1_096530	CDS	ACA1_096530	NW_004457313.1	1035339	1036724	D	encoded by transcript ACA1_096530A; uncharacterized protein	join(1035339..1035914,1035969..1036724)	Acanthamoeba castellanii str. Neff	14913467
ACA1_096540	CDS	ACA1_096540	NW_004457313.1	1036823	1039083	R	encoded by transcript ACA1_096540A; pentatricopeptide repeat domain containing protein	complement(join(1036823..1037476,1037551..1037622,1037691..1037819,1037942..1038070,1038147..1038299,1038375..1038526,1038596..1038777,1038896..1039083))	Acanthamoeba castellanii str. Neff	14913468
ACA1_096550	CDS	ACA1_096550	NW_004457313.1	1039637	1042494	R	encoded by transcript ACA1_096550A; leucine rich repeat domaincont	complement(join(1039637..1041041,1041140..1041288,1041388..1041426,1041667..1041709,1041786..1041994,1042105..1042180,1042255..1042349,1042426..1042494))	Acanthamoeba castellanii str. Neff	14913305
ACA1_096560	CDS	ACA1_096560	NW_004457313.1	1042915	1045274	D	encoded by transcript ACA1_096560A; coproporphyrinogen III oxidase	join(1042915..1043304,1043449..1043538,1043669..1043788,1043893..1044006,1044120..1044228,1044310..1044430,1044541..1044649,1044753..1044857,1044965..1045048,1045128..1045274)	Acanthamoeba castellanii str. Neff	14913306
ACA1_096580	CDS	ACA1_096580	NW_004457313.1	1051471	1054474	D	encoded by transcript ACA1_096580A; RhoGAP domain containing protein	join(1051471..1051524,1051625..1051706,1051765..1051841,1051975..1052080,1052397..1052433,1052533..1052594,1052672..1052749,1052834..1052909,1052990..1053089,1053174..1053217,1053328..1053391,1053474..1053547,1053651..1053723,1053851..1053952,1054035..1054126,1054197..1054296,1054418..1054474)	Acanthamoeba castellanii str. Neff	14913396
ACA1_096590	CDS	ACA1_096590	NW_004457313.1	1054660	1055422	R	encoded by transcript ACA1_096590A; universal stress protein (UspA)	complement(join(1054660..1054694,1054779..1054831,1054921..1055042,1055107..1055207,1055272..1055422))	Acanthamoeba castellanii str. Neff	14913397
ACA1_096600	CDS	ACA1_096600	NW_004457313.1	1056462	1061416	D	encoded by transcript ACA1_096600A; CUE domain containing protein	join(1056462..1056559,1056701..1057755,1057843..1058057,1058119..1058449,1058538..1058657,1058760..1058941,1059065..1059243,1059346..1059470,1059551..1059731,1059852..1059953,1060073..1060267,1060361..1060452,1060558..1060613,1060688..1060902,1060986..1061136,1061219..1061416)	Acanthamoeba castellanii str. Neff	14913142
ACA1_096610	CDS	ACA1_096610	NW_004457313.1	1061926	1062531	R	encoded by transcript ACA1_096610A; uncharacterized protein	complement(join(1061926..1062120,1062274..1062405,1062484..1062531))	Acanthamoeba castellanii str. Neff	14913143
ACA1_096620	CDS	ACA1_096620	NW_004457313.1	1062923	1063681	R	encoded by transcript ACA1_096620A; GATA zinc finger domain containing protein	complement(join(1062923..1063088,1063195..1063532,1063619..1063681))	Acanthamoeba castellanii str. Neff	14913489
ACA1_096630	CDS	ACA1_096630	NW_004457313.1	1064400	1069934	D	encoded by transcript ACA1_096630A; Ras GTPase activation domain containing protein	join(1064400..1064669,1064860..1064979,1065057..1065114,1065206..1065362,1065437..1065630,1065737..1065887,1065993..1066080,1066152..1066316,1066448..1066561,1066668..1067042,1067122..1067409,1067484..1067644,1067754..1069296,1069405..1069488,1069581..1069668,1069768..1069934)	Acanthamoeba castellanii str. Neff	14913490
ACA1_096640	CDS	ACA1_096640	NW_004457313.1	1070110	1071165	R	encoded by transcript ACA1_096640A; uncharacterized protein	complement(join(1070110..1070854,1070924..1071165))	Acanthamoeba castellanii str. Neff	14913491
ACA1_096650	CDS	ACA1_096650	NW_004457313.1	1071782	1072471	D	encoded by transcript ACA1_096650A; polyubiquitin, putative	join(1071782..1072216,1072244..1072471)	Acanthamoeba castellanii str. Neff	14913492
ACA1_096660	CDS	ACA1_096660	NW_004457313.1	1073411	1076758	R	encoded by transcript ACA1_096660A; helicase conserved Cterminal domain containing protein	complement(join(1073411..1073561,1073661..1073789,1073891..1074571,1074798..1074872,1074957..1075584,1075699..1076758))	Acanthamoeba castellanii str. Neff	14913493
ACA1_096670	CDS	ACA1_096670	NW_004457313.1	1076955	1078420	R	encoded by transcript ACA1_096670A; aldo/keto reductase	complement(join(1076955..1077150,1077211..1077407,1077498..1077610,1077707..1078072,1078143..1078241,1078318..1078420))	Acanthamoeba castellanii str. Neff	14913494
ACA1_096680	CDS	ACA1_096680	NW_004457313.1	1078919	1083036	D	encoded by transcript ACA1_096680A; serine/threonine kinase	join(1078919..1078928,1079075..1079222,1079313..1079825,1079906..1080672,1080790..1081160,1081234..1081386,1081478..1081713,1081799..1081901,1082005..1082401,1082534..1082676,1082804..1082916,1083003..1083036)	Acanthamoeba castellanii str. Neff	14913242
ACA1_096690	CDS	ACA1_096690	NW_004457313.1	1083235	1083816	R	encoded by transcript ACA1_096690A; uncharacterized protein	complement(1083235..1083816)	Acanthamoeba castellanii str. Neff	14913243
ACA1_096700	CDS	ACA1_096700	NW_004457313.1	1083980	1087415	D	encoded by transcript ACA1_096700A; kinesin motor domain containing protein	join(1083980..1084506,1084592..1084849,1085112..1085222,1085355..1085418,1085557..1085641,1085749..1085892,1085979..1086110,1086193..1086269,1086382..1086488,1086573..1086633,1086738..1086837,1086912..1086972,1087076..1087415)	Acanthamoeba castellanii str. Neff	14913164
ACA1_096710	CDS	ACA1_096710	NW_004457313.1	1087586	1089489	R	encoded by transcript ACA1_096710A; uncharacterized protein	complement(join(1087586..1087984,1088100..1088231,1088312..1088373,1088420..1088497,1088623..1089285,1089390..1089489))	Acanthamoeba castellanii str. Neff	14913165
ACA1_096720	CDS	ACA1_096720	NW_004457313.1	1089813	1092292	R	encoded by transcript ACA1_096720A; FYVE zinc finger domain containing protein	complement(join(1089813..1089964,1090053..1090226,1090320..1090430,1090514..1090674,1090763..1092235,1092252..1092292))	Acanthamoeba castellanii str. Neff	14913166
ACA1_096730	CDS	ACA1_096730	NW_004457313.1	1092732	1093685	D	encoded by transcript ACA1_096730A; coenzyme Q10, putative	join(1092732..1092949,1093020..1093141,1093223..1093296,1093382..1093457,1093528..1093685)	Acanthamoeba castellanii str. Neff	14913118
ACA1_096740	CDS	ACA1_096740	NW_004457313.1	1095854	1096111	R	encoded by transcript ACA1_096740A; uncharacterized protein	complement(join(1095854..1096038,1096051..1096111))	Acanthamoeba castellanii str. Neff	14913119
ACA1_096750	CDS	ACA1_096750	NW_004457313.1	1096224	1097300	D	encoded by transcript ACA1_096750A; 3-oxo-5-alpha-steroid 4-dehydrogenase	join(1096224..1096434,1096585..1097300)	Acanthamoeba castellanii str. Neff	14913153
ACA1_096760	CDS	ACA1_096760	NW_004457313.1	1097466	1098485	D	encoded by transcript ACA1_096760A; NIF3 (NGG1p interacting factor 3) domain containing protein	join(1097466..1097639,1097717..1097872,1097942..1097981,1098125..1098264,1098355..1098433,1098466..1098485)	Acanthamoeba castellanii str. Neff	14913154
ACA1_096770	CDS	ACA1_096770	NW_004457313.1	1098525	1099511	D	encoded by transcript ACA1_096770A; NIF3 family protein	join(1098525..1098578,1098682..1098784,1098874..1098949,1099057..1099178,1099262..1099343,1099409..1099511)	Acanthamoeba castellanii str. Neff	14913155
ACA1_096790	CDS	ACA1_096790	NW_004457313.1	1101515	1104332	D	encoded by transcript ACA1_096790A; UBA/TSN domain containing protein	join(<1101515..1101542,1101607..1101725,1101823..1101966,1102046..1102117,1102184..1102276,1102341..1102406,1102640..1102783,1102858..1102992,1103084..1103203,1103286..1103392,1103509..1103575,1103645..1103716,1103843..1103965,1104041..1104114,1104196..1104271,1104297..1104332)	Acanthamoeba castellanii str. Neff	14913120
ACA1_096800	CDS	ACA1_096800	NW_004457313.1	1104358	1105284	D	encoded by transcript ACA1_096800A; uncharacterized protein	1104358..1105284	Acanthamoeba castellanii str. Neff	14913121
ACA1_096810	CDS	ACA1_096810	NW_004457313.1	1105429	1107474	D	encoded by transcript ACA1_096810A; inosineuridine nucleoside N-ribohydrolase	join(1105429..1105605,1105695..1105820,1105925..1106022,1106139..1106284,1106426..1106492,1106597..1106724,1106806..1106882,1107047..1107164,1107293..1107474)	Acanthamoeba castellanii str. Neff	14913122
ACA1_096820	CDS	ACA1_096820	NW_004457313.1	1107655	1108958	R	encoded by transcript ACA1_096820A; uncharacterized protein	complement(join(1107655..1108122,1108226..1108374,1108495..1108663,1108765..1108840,1108903..1108958))	Acanthamoeba castellanii str. Neff	14913226
ACA1_096830	CDS	ACA1_096830	NW_004457313.1	1109796	1120365	D	encoded by transcript ACA1_096830A; FKBP12rapamycin complex-associated protein	join(1109796..1109890,1109997..1110042,1110099..1110134,1110148..1110280,1110376..1110673,1110776..1110966,1111052..1111203,1111353..1111632,1111769..1111986,1112118..1112245,1112335..1112474,1112548..1112769,1112845..1112972,1113050..1113239,1113338..1113597,1113724..1113909,1113992..1114106,1114240..1114337,1114394..1114570,1114590..1114675,1114808..1114962,1115029..1115348,1115446..1115679,1115837..1115926,1116010..1116267,1116311..1116601,1116793..1116977,1117087..1117482,1117583..1117846,1117953..1118154,1118266..1118456,1118554..1118747,1118850..1119142,1119251..1119490,1119813..1119849,1119972..1120137,1120203..1120365)	Acanthamoeba castellanii str. Neff	14913227
ACA1_096940	CDS	ACA1_096940	NW_004457313.1	1121516	1122800	R	encoded by transcript ACA1_096940A; uncharacterized protein	complement(join(1121516..1122638,1122709..1122800))	Acanthamoeba castellanii str. Neff	14913228
ACA1_096950	CDS	ACA1_096950	NW_004457313.1	1123436	1124916	D	encoded by transcript ACA1_096950A; RNA recognition motif domain containing protein	join(1123436..1123502,1123576..1123676,1123719..1123884,1123968..1124050,1124175..1124313,1124427..1124544,1124625..1124916)	Acanthamoeba castellanii str. Neff	14913410
ACA1_096960	CDS	ACA1_096960	NW_004457313.1	1125250	1127124	R	encoded by transcript ACA1_096960A; uncharacterized protein	complement(join(1125250..1125310,1125357..1125652,1125747..1125875,1125957..1126138,1126264..1126926,1127022..1127124))	Acanthamoeba castellanii str. Neff	14913411
ACA1_096970	CDS	ACA1_096970	NW_004457313.1	1128197	1129593	R	encoded by transcript ACA1_096970A; NADH cytochrome b reductase, putative	complement(join(1128197..1128349,1128474..1128642,1128707..1128852,1128975..1129053,1129142..1129328,1129422..1129593))	Acanthamoeba castellanii str. Neff	14913412
ACA1_096980	CDS	ACA1_096980	NW_004457313.1	1130161	1130829	R	encoded by transcript ACA1_096980A; serine/threonine protein kinase	complement(1130161..1130829)	Acanthamoeba castellanii str. Neff	14913374
ACA1_096990	CDS	ACA1_096990	NW_004457313.1	1131688	1137761	D	encoded by transcript ACA1_096990A; Peroxin 1 (Pex1), putative	join(1131688..1131939,1132036..1132119,1132217..1132331,1132424..1132534,1132614..1132884,1132986..1133148,1133256..1133362,1133449..1133536,1133573..1133669,1133754..1134162,1134319..1134440,1134532..1134636,1134718..1134872,1134964..1135066,1135155..1135288,1135395..1135572,1135654..1135782,1135860..1135956,1136311..1136434,1136499..1136626,1136692..1136796,1136872..1136965,1137025..1137184,1137259..1137365,1137447..1137616,1137686..1137761)	Acanthamoeba castellanii str. Neff	14913375
ACA1_097000	CDS	ACA1_097000	NW_004457313.1	1138142	1139015	D	encoded by transcript ACA1_097000A; ribosomal family s4e, putative	join(1138142..1138337,1138414..1138649,1138719..1139015)	Acanthamoeba castellanii str. Neff	14913376
ACA1_097010	CDS	ACA1_097010	NW_004457313.1	1139224	1140470	R	encoded by transcript ACA1_097010A; uncharacterized protein	complement(join(1139224..1139390,1139468..1139638,1139706..1140031,1140097..1140367,1140452..1140470))	Acanthamoeba castellanii str. Neff	14913216
ACA1_097020	CDS	ACA1_097020	NW_004457313.1	1141114	1143637	R	encoded by transcript ACA1_097020A; DNA polymerase epsilon subunit B protein	complement(join(1141114..1141247,1141332..1141974,1142060..1142164,1142250..1142372,1142504..1142683,1142780..1142972,1143056..1143407,1143475..1143637))	Acanthamoeba castellanii str. Neff	14913217
ACA1_097030	CDS	ACA1_097030	NW_004457313.1	1143902	1146720	R	encoded by transcript ACA1_097030A; carrier superfamily protein	complement(join(1143902..1144045,1144132..1144212,1144310..1144440,1144513..1144699,1144778..1144859,1144987..1145107,1145194..1145529,1145609..1145707,1145785..1145895,1145997..1146081,1146133..1146310,1146389..1146519,1146622..1146720))	Acanthamoeba castellanii str. Neff	14913281
ACA1_097040	CDS	ACA1_097040	NW_004457313.1	1147050	1149278	R	encoded by transcript ACA1_097040A; uncharacterized protein	complement(join(1147050..1148213,1148287..1148394,1148429..1148792,1148977..1149278))	Acanthamoeba castellanii str. Neff	14913282
ACA1_097050	CDS	ACA1_097050	NW_004457313.1	1149443	1150252	D	encoded by transcript ACA1_097050A; DNL zinc finger protein	join(1149443..1149449,1149540..1150252)	Acanthamoeba castellanii str. Neff	14913479
ACA1_097060	CDS	ACA1_097060	NW_004457313.1	1150787	1151080	D	encoded by transcript ACA1_097060A; uncharacterized protein	1150787..1151080	Acanthamoeba castellanii str. Neff	14913480
ACA1_097070	CDS	ACA1_097070	NW_004457313.1	1151618	1153787	D	encoded by transcript ACA1_097070A; acetyltransferase, GNAT superfamily protein	join(1151618..1151675,1151721..1151947,1152031..1152175,1152415..1152758,1152837..1152935,1153061..1153166,1153267..1153340,1153450..1153530,1153614..1153787)	Acanthamoeba castellanii str. Neff	14913481
ACA1_097080	CDS	ACA1_097080	NW_004457313.1	1153993	1154907	R	encoded by transcript ACA1_097080A; uncharacterized protein	complement(join(1153993..1154171,1154292..1154493,1154580..1154778,1154888..1154907))	Acanthamoeba castellanii str. Neff	14913482
ACA1_097090	CDS	ACA1_097090	NW_004457313.1	1155461	1156709	R	encoded by transcript ACA1_097090A; transloconassociated protein, putative	complement(join(1155461..1155607,1155717..1155798,1155911..1156122,1156206..1156371,1156528..1156709))	Acanthamoeba castellanii str. Neff	14913187
ACA1_097100	CDS	ACA1_097100	NW_004457313.1	1156936	1159039	R	encoded by transcript ACA1_097100A; alkaline phosphatase D, putative	complement(join(1156936..1157332,1157428..1157600,1157681..1157815,1157887..1158066,1158244..1158434,1158521..1158662,1158728..1159039))	Acanthamoeba castellanii str. Neff	14913188
ACA1_097110	CDS	ACA1_097110	NW_004457313.1	1159138	1162279	R	encoded by transcript ACA1_097110A; tRNA nucleotidyltransferase/poly(A) polymerase	complement(join(1159138..1159312,1159414..1159687,1159784..1159887,1159965..1160075,1160141..1160242,1160320..1160530,1160624..1160691,1160754..1160854,1160970..1161158,1161234..1161290,1161368..1161529,1161564..1161910,1161985..1162117,1162157..1162279))	Acanthamoeba castellanii str. Neff	14913147
ACA1_097120	CDS	ACA1_097120	NW_004457313.1	1162427	1164467	R	encoded by transcript ACA1_097120A; DHHA1 domain containing protein	complement(join(1162427..1162534,1162613..1162713,1162850..1162937,1163014..1163156,1163299..1163541,1163694..1163837,1163995..1164258,1164362..1164467))	Acanthamoeba castellanii str. Neff	14913148
ACA1_097130	CDS	ACA1_097130	NW_004457313.1	1165083	1171477	D	encoded by transcript ACA1_097130A; serine/threonine kinase	join(1165083..1165140,1165273..1165375,1165508..1165568,1165651..1165785,1165906..1166214,1166312..1166625,1166722..1167071,1167155..1167226,1167318..1167628,1167712..1167850,1167921..1168313,1168383..1168642,1168766..1168882,1168964..1169322,1169413..1171477)	Acanthamoeba castellanii str. Neff	14913149
ACA1_097150	CDS	ACA1_097150	NW_004457313.1	1172058	1173413	D	encoded by transcript ACA1_097150A; uncharacterized protein	join(1172058..1172776,1172877..1172987,1173239..1173413)	Acanthamoeba castellanii str. Neff	14913246
ACA1_097160	CDS	ACA1_097160	NW_004457313.1	1174159	1174851	R	encoded by transcript ACA1_097160A; uncharacterized protein	complement(join(1174159..1174264,1174347..1174543,1174609..1174851))	Acanthamoeba castellanii str. Neff	14913190
ACA1_097170	CDS	ACA1_097170	NW_004457313.1	1175169	1175919	D	encoded by transcript ACA1_097170A; LSM domain containing protein	join(1175169..1175171,1175235..1175333,1175398..1175475,1175704..1175919)	Acanthamoeba castellanii str. Neff	14913247
ACA1_097180	CDS	ACA1_097180	NW_004457313.1	1176192	1180256	D	encoded by transcript ACA1_097180A; uncharacterized protein	join(1176192..1176455,1176570..1176686,1176756..1176805,1177096..1177228,1177450..1178616,1178678..1179496,1179606..1180256)	Acanthamoeba castellanii str. Neff	14913248
ACA1_097190	CDS	ACA1_097190	NW_004457313.1	1180401	1182937	R	encoded by transcript ACA1_097190A; phospholipase A2, group IVB, putative	complement(join(1180401..1180754,1180821..1180960,1181061..1181289,1181401..1181572,1181697..1181893,1181992..1182101,1182240..1182307,1182397..1182612,1182714..1182937))	Acanthamoeba castellanii str. Neff	14913249
ACA1_097200	CDS	ACA1_097200	NW_004457313.1	1183193	1184440	D	encoded by transcript ACA1_097200A; MIF4G domain containing protein	join(1183193..1183305,1183408..1183609,1183709..1184440)	Acanthamoeba castellanii str. Neff	14913136
ACA1_097210	CDS	ACA1_097210	NW_004457313.1	1184613	1185868	R	encoded by transcript ACA1_097210A; uncharacterized protein	complement(join(1184613..1184782,1184949..1185068,1185200..1185296,1185494..1185636,1185793..1185868))	Acanthamoeba castellanii str. Neff	14913137
ACA1_097220	CDS	ACA1_097220	NW_004457313.1	1188653	1189582	R	encoded by transcript ACA1_097220A; UBX domain containing protein	complement(1188653..1189582)	Acanthamoeba castellanii str. Neff	14913534
ACA1_097230	CDS	ACA1_097230	NW_004457313.1	1190046	1190693	R	encoded by transcript ACA1_097230A; Double-stranded DNA-binding domain containing protein	complement(join(1190046..1190078,1190149..1190309,1190381..1190445,1190508..1190581,1190655..1190693))	Acanthamoeba castellanii str. Neff	14913535
ACA1_097240	CDS	ACA1_097240	NW_004457313.1	1191115	1192003	D	encoded by transcript ACA1_097240A; uncharacterized protein	join(1191115..1191500,1191623..1191755,1191965..1192003)	Acanthamoeba castellanii str. Neff	14913536
ACA1_097250	CDS	ACA1_097250	NW_004457313.1	1192354	1192899	D	encoded by transcript ACA1_097250A; Fbox domain containing protein	join(1192354..1192527,1192629..1192727,1192828..1192899)	Acanthamoeba castellanii str. Neff	14913537
ACA1_097260	CDS	ACA1_097260	NW_004457313.1	1192987	1199163	R	encoded by transcript ACA1_097260A; serine/threonine kinase	complement(join(1192987..1193969,1194108..1195112,1195278..1195584,1195692..1195808,1195912..1196268,1196348..1196513,1196581..1196722,1196793..1197057,1197121..1197354,1197420..1197532,1197602..1197718,1197866..1197935,1198022..1198185,1198251..1198410,1198487..1198783,1198861..1198967,1199127..1199163))	Acanthamoeba castellanii str. Neff	14913132
ACA1_097270	CDS	ACA1_097270	NW_004457313.1	1199771	1205931	R	encoded by transcript ACA1_097270A; serine/threonine protein kinase	complement(join(1199771..1201860,1201944..1202250,1202340..1203115,1203200..1203414,1203484..1203770,1203839..1203954,1204023..1204326,1204433..1204530,1204629..1204788,1204895..1205206,1205281..1205343,1205365..1205495,1205698..1205772,1205865..1205931))	Acanthamoeba castellanii str. Neff	14913133
ACA1_097280	CDS	ACA1_097280	NW_004457313.1	1206787	1209436	R	encoded by transcript ACA1_097280A; uncharacterized protein	complement(join(1206787..1206927,1206999..1207134,1207216..1207346,1207421..1207633,1207717..1207955,1208031..1208189,1208257..1208428,1208500..1208545,1208610..1208757,1208831..1208899,1208968..1209055,1209230..1209436))	Acanthamoeba castellanii str. Neff	14913272
ACA1_097290	CDS	ACA1_097290	NW_004457313.1	1209686	1210738	D	encoded by transcript ACA1_097290A; uncharacterized protein	join(1209686..1209828,1209900..1210270,1210476..1210554,1210630..1210738)	Acanthamoeba castellanii str. Neff	14913273
ACA1_097300	CDS	ACA1_097300	NW_004457313.1	1211883	1217832	D	encoded by transcript ACA1_097300A; serine/threonine kinase	join(1211883..1211949,1212110..1212204,1212298..1212510,1212581..1212889,1213004..1213157,1213244..1213645,1213747..1213865,1213945..1214476,1214502..1214516,1214564..1215333,1215409..1217832)	Acanthamoeba castellanii str. Neff	14913356
ACA1_097310	CDS	ACA1_097310	NW_004457313.1	1218179	1218412	D	encoded by transcript ACA1_097310A; uncharacterized protein	1218179..1218412	Acanthamoeba castellanii str. Neff	14913357
ACA1_097320	CDS	ACA1_097320	NW_004457313.1	1218569	1219638	D	encoded by transcript ACA1_097320A; FADdependent oxidoreductase	join(1218569..1218677,1218775..1218877,1218969..1219050,1219118..1219184,1219258..1219334,1219402..1219638)	Acanthamoeba castellanii str. Neff	14913528
ACA1_097330	CDS	ACA1_097330	NW_004457313.1	1219756	1220874	D	encoded by transcript ACA1_097330A; FADdependent oxidoreductase	join(1219756..1219867,1219973..1220136,1220205..1220418,1220519..1220686,1220777..1220874)	Acanthamoeba castellanii str. Neff	14913529
ACA1_097340	CDS	ACA1_097340	NW_004457313.1	1221440	1222124	R	encoded by transcript ACA1_097340A; uncharacterized protein	complement(join(1221440..1221653,1221725..1221941,1222028..1222124))	Acanthamoeba castellanii str. Neff	14913530
ACA1_097350	CDS	ACA1_097350	NW_004457313.1	1222336	1225618	D	encoded by transcript ACA1_097350A; DIL domain containing protein	join(1222336..1222435,1222510..1222604,1222730..1222849,1222983..1223198,1223270..1223322,1223404..1223597,1223693..1223849,1223925..1224093,1224155..1224317,1224431..1224501,1224577..1224632,1224712..1224951,1225020..1225083,1225199..1225332,1225432..1225618)	Acanthamoeba castellanii str. Neff	14913269
ACA1_097360	CDS	ACA1_097360	NW_004457313.1	1225771	1227098	D	encoded by transcript ACA1_097360A; RINGfinger protein	join(1225771..1225881,1225997..1226062,1226141..1226225,1226400..1226439,1226478..1226545,1226625..1226683,1226733..1226825,1226928..1227098)	Acanthamoeba castellanii str. Neff	14913270
ACA1_097370	CDS	ACA1_097370	NW_004457313.1	1227371	1228345	D	encoded by transcript ACA1_097370A; Ras subfamily protein	join(1227371..1227442,1227687..1227734,1227789..1227846,1227949..1228217,1228268..1228345)	Acanthamoeba castellanii str. Neff	14913271
ACA1_097380	CDS	ACA1_097380	NW_004457313.1	1229081	1229973	R	encoded by transcript ACA1_097380A; uncharacterized protein	complement(join(1229081..1229122,1229155..1229292,1229363..1229578,1229662..1229973))	Acanthamoeba castellanii str. Neff	14913171
ACA1_097390	CDS	ACA1_097390	NW_004457313.1	1230074	1232357	D	encoded by transcript ACA1_097390A; phosphatidylinositol glycan	join(1230074..1230232,1230370..1230441,1230567..1230756,1230768..1230805,1230825..1231235,1231316..1231725,1231793..1231903,1231985..1232357)	Acanthamoeba castellanii str. Neff	14913172
ACA1_097400	CDS	ACA1_097400	NW_004457313.1	1232884	1235552	D	encoded by transcript ACA1_097400A; betaphosphoglucomutase family hydrolase	join(1232884..1233418,1233492..1233664,1233736..1233811,1233907..1234280,1234373..1234525,1234591..1234675,1234770..1234946,1235028..1235103,1235204..1235312,1235406..1235552)	Acanthamoeba castellanii str. Neff	14913173
ACA1_097410	CDS	ACA1_097410	NW_004457313.1	1235604	1238604	D	encoded by transcript ACA1_097410A; glucosyl hydrolase family protein	join(1235604..1235747,1235819..1236029,1236196..1236305,1236396..1236524,1236637..1236741,1236880..1237030,1237128..1237262,1237324..1237610,1237684..1237842,1237954..1238146,1238210..1238378,1238463..1238604)	Acanthamoeba castellanii str. Neff	14913499
ACA1_097420	CDS	ACA1_097420	NW_004457313.1	1238722	1243823	R	encoded by transcript ACA1_097420A; NADbinding domain 4 domain containing protein	complement(join(1238722..1238905,1238982..1239681,1239765..1240149,1240270..1241073,1241139..1241290,1241361..1241469,1241600..1241715,1241787..1241939,1241968..1242117,1242180..1242268,1242351..1242397,1242466..1242552,1242644..1242706,1242777..1242947,1243013..1243115,1243221..1243359,1243465..1243635,1243718..1243823))	Acanthamoeba castellanii str. Neff	14913500
ACA1_097430	CDS	ACA1_097430	NW_004457313.1	1243965	1245151	D	encoded by transcript ACA1_097430A; acylCoA binding protein, putative	join(1243965..1244178,1244320..1244463,1244565..1244828,1244910..1245000,1245073..1245151)	Acanthamoeba castellanii str. Neff	14913557
ACA1_097440	CDS	ACA1_097440	NW_004457313.1	1245312	1245713	D	encoded by transcript ACA1_097440A; uncharacterized protein	join(1245312..1245357,1245435..1245506,1245586..1245713)	Acanthamoeba castellanii str. Neff	14913558
ACA1_097450	CDS	ACA1_097450	NW_004457313.1	1246184	1247890	R	encoded by transcript ACA1_097450A; tRNAdihydrouridine synthase A, putative	complement(join(1246184..1246360,1246574..1246955,1247028..1247223,1247301..1247514,1247641..1247773,1247865..1247890))	Acanthamoeba castellanii str. Neff	14913404
ACA1_097460	CDS	ACA1_097460	NW_004457313.1	1248166	1249522	R	encoded by transcript ACA1_097460A; uncharacterized protein	complement(join(1248166..1248582,1248671..1248838,1248921..1249050,1249153..1249209,1249320..1249522))	Acanthamoeba castellanii str. Neff	14913405
ACA1_097480	CDS	ACA1_097480	NW_004457313.1	1251733	1253165	D	encoded by transcript ACA1_097480A; uncharacterized protein	join(1251733..1251805,1251878..1251921,1252012..1252045,1252149..1252206,1252295..1252386,1252456..1252599,1252683..1252791,1252867..1252964,1253023..1253165)	Acanthamoeba castellanii str. Neff	14913505
ACA1_097490	CDS	ACA1_097490	NW_004457313.1	1253392	1254709	R	encoded by transcript ACA1_097490A; uncharacterized protein	complement(join(1253392..1253825,1253923..1254709))	Acanthamoeba castellanii str. Neff	14913506
ACA1_097500	CDS	ACA1_097500	NW_004457313.1	1254984	1257898	D	encoded by transcript ACA1_097500A; uncharacterized protein	join(1254984..1255026,1255106..1255229,1255301..1255434,1255518..1255662,1255757..1255928,1255989..1256250,1256355..1256507,1256590..1256689,1256787..1256856,1256962..1257071,1257168..1257285,1257379..1257472,1257594..1257898)	Acanthamoeba castellanii str. Neff	14913507
ACA1_097510	CDS	ACA1_097510	NW_004457313.1	1259074	1265326	R	encoded by transcript ACA1_097510A; serine/threonine kinase	complement(join(1259074..1260149,1260223..1261190,1261279..1261481,1261571..1261729,1261801..1261917,1262011..1262681,1262770..1263085,1263122..1263358,1263474..1263583,1263645..1264046,1264123..1264279,1264368..1264673,1264784..1264852,1264925..1264996,1265078..1265172,1265260..1265326))	Acanthamoeba castellanii str. Neff	14913663
ACA1_097520	CDS	ACA1_097520	NW_004457313.1	1266277	1267283	R	encoded by transcript ACA1_097520A; uncharacterized protein	complement(join(1266277..1266366,1266572..1266668,1266745..1266815,1266905..1267073,1267198..1267283))	Acanthamoeba castellanii str. Neff	14913664
ACA1_097540	CDS	ACA1_097540	NW_004457313.1	1274542	1279708	R	encoded by transcript ACA1_097540A; serine/threonine kinase	complement(join(1274542..1274788,1274909..1276029,1276151..1276827,1276912..1277137,1277225..1277344,1277417..1277523,1277602..1279518,1279630..1279708))	Acanthamoeba castellanii str. Neff	14913591
ACA1_097550	CDS	ACA1_097550	NW_004457313.1	1280413	1281555	R	encoded by transcript ACA1_097550A; inosineuridine preferring nucleoside hydrolase family protein	complement(1280413..1281555)	Acanthamoeba castellanii str. Neff	14913592
ACA1_097560	CDS	ACA1_097560	NW_004457313.1	1281872	1283400	R	encoded by transcript ACA1_097560A; proline racemase	complement(join(1281872..1281942,1282014..1282181,1282233..1282325,1282389..1282491,1282566..1282666,1282725..1282824,1282898..1283041,1283130..1283217,1283285..1283400))	Acanthamoeba castellanii str. Neff	14913123
ACA1_097570	CDS	ACA1_097570	NW_004457313.1	1283763	1287296	R	encoded by transcript ACA1_097570A; Protein of unknown function (DUF1253) containing protein	complement(join(1283763..1283930,1284006..1284153,1284248..1284378,1284449..1284594,1284663..1284745,1284835..1285017,1285085..1285241,1285309..1285384,1285482..1285596,1285674..1285742,1285820..1285973,1286086..1286236,1286339..1286455,1286550..1287296))	Acanthamoeba castellanii str. Neff	14913124
ACA1_097580	CDS	ACA1_097580	NW_004457313.1	1287500	1288893	D	encoded by transcript ACA1_097580A; uncharacterized protein	join(1287500..1288129,1288242..1288452,1288526..1288615,1288697..1288893)	Acanthamoeba castellanii str. Neff	14913125
ACA1_097590	CDS	ACA1_097590	NW_004457313.1	1289044	1291996	R	encoded by transcript ACA1_097590A; amine oxidase, flavincontaining superfamily protein	complement(join(1289044..1289172,1289326..1290263,1290337..1290770,1290854..1290908,1290981..1291251,1291385..1291437,1291513..1291615,1291819..1291900,1291983..1291996))	Acanthamoeba castellanii str. Neff	14913312
ACA1_097600	CDS	ACA1_097600	NW_004457313.1	1292558	1296888	D	encoded by transcript ACA1_097600A; peroxidase	join(1292558..1292680,1292787..1292967,1293076..1293231,1293504..1293625,1293737..1295170,1295295..1295791,1295874..1296888)	Acanthamoeba castellanii str. Neff	14913313
ACA1_097610	CDS	ACA1_097610	NW_004457313.1	1297318	1297803	D	encoded by transcript ACA1_097610A; uncharacterized protein	join(1297318..1297431,1297458..1297497,1297625..1297803)	Acanthamoeba castellanii str. Neff	14913598
ACA1_097620	CDS	ACA1_097620	NW_004457313.1	1297965	1300294	R	encoded by transcript ACA1_097620A; uncharacterized protein	complement(join(1297965..1298071,1298149..1298297,1298349..1298532,1298634..1299116,1299203..1299720,1299828..1299952,1300097..1300294))	Acanthamoeba castellanii str. Neff	14913599
ACA1_097630	CDS	ACA1_097630	NW_004457313.1	1300400	1302237	D	encoded by transcript ACA1_097630A; rhodaneselike domain containing protein	join(1300400..1300436,1300725..1301394,1301490..1301583,1301690..1301762,1301859..1301974,1302076..1302237)	Acanthamoeba castellanii str. Neff	14913600
ACA1_097640	CDS	ACA1_097640	NW_004457313.1	1302725	1305274	D	encoded by transcript ACA1_097640A; Fbox domain containing protein	join(1302725..1303039,1303074..1303259,1303274..1303348,1303444..1303621,1303761..1303982,1304096..1304418,1304522..1304981,1305058..1305224,1305245..1305274)	Acanthamoeba castellanii str. Neff	14913203
ACA1_097650	CDS	ACA1_097650	NW_004457313.1	1305421	1306085	R	encoded by transcript ACA1_097650A; uncharacterized protein	complement(join(1305421..1305822,1306023..1306085))	Acanthamoeba castellanii str. Neff	14913204
ACA1_097660	CDS	ACA1_097660	NW_004457313.1	1306437	1312889	R	encoded by transcript ACA1_097660A; leucinerich repeat kinase	complement(join(1306437..1306677,1306773..1306838,1306939..1307056,1307140..1307191,1307346..1307590,1307678..1307874,1307980..1308074,1308144..1308544,1308611..1308700,1308807..1308957,1309054..1309166,1309301..1309529,1309605..1309801,1309895..1310067,1310211..1310259,1310304..1310476,1310553..1310683,1310770..1311201,1311279..1311368,1311456..1311503,1311653..1311739,1312239..1312325,1312767..1312889))	Acanthamoeba castellanii str. Neff	14913205
ACA1_097670	CDS	ACA1_097670	NW_004457313.1	1313678	1314821	D	encoded by transcript ACA1_097670A; uncharacterized protein	join(1313678..1314191,1314307..1314821)	Acanthamoeba castellanii str. Neff	14913538
ACA1_097680	CDS	ACA1_097680	NW_004457313.1	1315161	1315884	D	encoded by transcript ACA1_097680A; acetyltransferase	join(1315161..1315277,1315348..1315884)	Acanthamoeba castellanii str. Neff	14913542
ACA1_097690	CDS	ACA1_097690	NW_004457313.1	1316153	1321820	D	encoded by transcript ACA1_097690A; Ankyrin repeat and PH domain containing GTP-ase activating protein	join(1316153..1316282,1316450..1316527,1316684..1316745,1316852..1316923,1316986..1317096,1317180..1317331,1317415..1317622,1317714..1317935,1318101..1318296,1318379..1318512,1318597..1318776,1318880..1319008,1319101..1319328,1319501..1319845,1319927..1320050,1320151..1320245,1320352..1320652,1320715..1321820)	Acanthamoeba castellanii str. Neff	14913543
ACA1_097700	CDS	ACA1_097700	NW_004457313.1	1322053	1323754	R	encoded by transcript ACA1_097700A; CRAL/TRIO domain containing protein	complement(join(1322053..1322337,1322397..1322570,1322668..1322844,1322977..1323066,1323243..1323335,1323443..1323754))	Acanthamoeba castellanii str. Neff	14913544
ACA1_097710	CDS	ACA1_097710	NW_004457313.1	1324710	1325486	D	encoded by transcript ACA1_097710A; uncharacterized protein	1324710..1325486	Acanthamoeba castellanii str. Neff	14913587
ACA1_097720	CDS	ACA1_097720	NW_004457313.1	1325851	1327215	D	encoded by transcript ACA1_097720A; uncharacterized protein	join(1325851..1326216,1326295..1326447,1326573..1326852,1326926..1327215)	Acanthamoeba castellanii str. Neff	14913588
ACA1_097730	CDS	ACA1_097730	NW_004457313.1	1327367	1329471	R	encoded by transcript ACA1_097730A; protein phosphatase 2C domain containing protein	complement(join(1327367..1328424,1328559..1328707,1328795..1329061,1329167..1329471))	Acanthamoeba castellanii str. Neff	14913589
ACA1_097740	CDS	ACA1_097740	NW_004457313.1	1330210	1334600	D	encoded by transcript ACA1_097740A; PH domain containing protein	join(1330210..1330249,1330319..1330386,1330462..1330872,1330931..1330969,1331039..1331113,1331178..1331360,1331439..1331548,1331682..1331740,1331870..1332003,1332073..1332170,1332236..1332323,1332409..1332605,1332676..1332776,1332839..1333170,1333245..1334600)	Acanthamoeba castellanii str. Neff	14913398
ACA1_097750	CDS	ACA1_097750	NW_004457313.1	1334714	1336270	R	encoded by transcript ACA1_097750A; CRAL/TRIO domain containing protein	complement(join(1334714..1334923,1335005..1335163,1335244..1335360,1335433..1335558,1335637..1335708,1335789..1335868,1335965..1336007,1336080..1336174,1336255..1336270))	Acanthamoeba castellanii str. Neff	14913399
ACA1_097760	CDS	ACA1_097760	NW_004457313.1	1336556	1337901	D	encoded by transcript ACA1_097760A; uncharacterized protein	join(1336556..1336638,1336699..1336897,1336962..1337026,1337104..1337184,1337261..1337782,1337832..1337901)	Acanthamoeba castellanii str. Neff	14913400
ACA1_097770	CDS	ACA1_097770	NW_004457313.1	1338228	1338442	D	encoded by transcript ACA1_097770A; uncharacterized protein	join(1338228..1338341,1338356..1338442)	Acanthamoeba castellanii str. Neff	14913655
ACA1_097790	CDS	ACA1_097790	NW_004457313.1	1339770	1343163	R	encoded by transcript ACA1_097790A; uncharacterized protein	complement(join(1339770..1339910,1339978..1340064,1340126..1340197,1340304..1340351,1340417..1341144,1341244..1341378,1341483..1341592,1341711..1341810,1341902..1342136,1342304..1342410,1342552..1342606,1342669..1343163))	Acanthamoeba castellanii str. Neff	14913298
ACA1_097800	CDS	ACA1_097800	NW_004457313.1	1343305	1347186	D	encoded by transcript ACA1_097800A; ribonuclease II	join(1343305..1343935,1344015..1344085,1344163..1344360,1344429..1344592,1344686..1344902,1344987..1345162,1345293..1345423,1345491..1345693,1345771..1346056,1346149..1346396,1346466..1346615,1346699..1346913,1346982..1347186)	Acanthamoeba castellanii str. Neff	14913299
ACA1_097810	CDS	ACA1_097810	NW_004457313.1	1347896	1348255	D	encoded by transcript ACA1_097810A; uncharacterized protein	1347896..1348255	Acanthamoeba castellanii str. Neff	14913300
ACA1_097820	CDS	ACA1_097820	NW_004457313.1	1348439	1349977	R	encoded by transcript ACA1_097820A; zincbinding alcohol dehydrogenase family protein	complement(join(1348439..1348666,1348737..1348868,1348934..1349068,1349156..1349305,1349411..1349523,1349600..1349750,1349825..1349977))	Acanthamoeba castellanii str. Neff	14913435
ACA1_097830	CDS	ACA1_097830	NW_004457313.1	1350296	1352735	R	encoded by transcript ACA1_097830A; LIM domain containing protein	complement(join(1350296..1350424,1350520..1350589,1350671..1350810,1350940..1350997,1351082..1351151,1351240..1351310,1351414..1351775,1351803..1352197,1352309..1352735))	Acanthamoeba castellanii str. Neff	14913436
ACA1_097840	CDS	ACA1_097840	NW_004457313.1	1353586	1358536	D	encoded by transcript ACA1_097840A; serine/threonine kinase	join(<1353586..1353662,1353743..1353844,1353903..1353963,1354119..1354259,1354325..1354636,1354703..1355016,1355099..1355666,1355740..1355820,1355950..1356085,1356163..1356191,1356215..1356303,1356377..1356582,1356735..1356888,1356990..1357212,1357289..1357385,1357473..1357734,1357844..1358228,1358243..>1358536)	Acanthamoeba castellanii str. Neff	14913437
ACA1_097950	CDS	ACA1_097950	NW_004457313.1	1361328	1362840	R	encoded by transcript ACA1_097950A; NADdependent protein deacetylase, SIR2 family	complement(join(1361328..1361501,1361571..1361707,1361797..1362014,1362100..1362161,1362240..1362619,1362711..1362840))	Acanthamoeba castellanii str. Neff	14913333
ACA1_097960	CDS	ACA1_097960	NW_004457313.1	1363040	1363390	R	encoded by transcript ACA1_097960A; ribosomal protein L33, putative	complement(join(1363040..1363072,1363153..1363284,1363367..1363390))	Acanthamoeba castellanii str. Neff	14913334
ACA1_097970	CDS	ACA1_097970	NW_004457313.1	1363625	1366373	D	encoded by transcript ACA1_097970A; methionine-tRNA ligase	join(1363625..1363798,1363872..1363909,1363987..1364117,1364197..1364320,1364392..1364595,1364700..1364943,1365022..1365309,1365386..1365564,1365650..1366373)	Acanthamoeba castellanii str. Neff	14913330
ACA1_097980	CDS	ACA1_097980	NW_004457313.1	1366459	1366956	R	encoded by transcript ACA1_097980A; SAM domain (Sterile alpha motif) domain containing protein	complement(1366459..1366956)	Acanthamoeba castellanii str. Neff	14913331
ACA1_097990	CDS	ACA1_097990	NW_004457313.1	1367965	1371305	R	encoded by transcript ACA1_097990A; protein kinase	complement(join(1367965..1368007,1368077..1368246,1368346..1368426,1368510..1368612,1368695..1368780,1368894..1369013,1369103..1369234,1369306..1369435,1369513..1369669,1369747..1369922,1370014..1370845,1371010..1371168,1371239..1371305))	Acanthamoeba castellanii str. Neff	14913332
ACA1_098000	CDS	ACA1_098000	NW_004457313.1	1371819	1375904	D	encoded by transcript ACA1_098000A; SAM domain (Sterile alpha motif) domain containing protein	join(1371819..1372025,1372201..1372584,1372692..1372836,1372920..1375681,1375773..1375904)	Acanthamoeba castellanii str. Neff	14913422
ACA1_098010	CDS	ACA1_098010	NW_004457313.1	1376205	1377728	D	encoded by transcript ACA1_098010A; uncharacterized protein	join(1376205..1376437,1376598..1376697,1376810..1376986,1377060..1377302,1377383..1377495,1377599..1377728)	Acanthamoeba castellanii str. Neff	14913423
ACA1_098020	CDS	ACA1_098020	NW_004457313.1	1377822	1378793	R	encoded by transcript ACA1_098020A; uncharacterized protein	complement(join(1377822..1378003,1378096..1378261,1378404..1378727,1378752..1378793))	Acanthamoeba castellanii str. Neff	14913364
ACA1_098030	CDS	ACA1_098030	NW_004457313.1	1379150	1387792	R	encoded by transcript ACA1_098030A; leucine rich repeat-containing protein	complement(join(1379150..1379844,1379950..1380080,1380153..1380536,1380621..1380725,1380818..1381417,1381526..1381709,1381817..1381949,1382036..1382100,1382174..1382267,1382574..1382730,1382803..1382928,1383015..1383157,1383240..1383304,1383387..1383598,1383661..1383862,1383933..1384117,1384220..1384407,1384487..1384737,1384809..1385562,1385633..1385845,1385919..1386110,1386258..1386520,1386601..1386739,1386827..1387792))	Acanthamoeba castellanii str. Neff	14913365
ACA1_098040	CDS	ACA1_098040	NW_004457313.1	1388122	1394144	R	encoded by transcript ACA1_098040A; phospholipidtranslocating P-type ATPase	complement(join(1388122..1388293,1388371..1388455,1388538..1388659,1388745..1388886,1388971..1389214,1389273..1389414,1389490..1389659,1389776..1389896,1389970..1390238,1390329..1390439,1390521..1390670,1390752..1390924,1391003..1391116,1391200..1391302,1391414..1391638,1391707..1391804,1391912..1392074,1392163..1392305,1392407..1392738,1392848..1392996,1393075..1393105,1393207..1393391,1393447..1393545,1393633..1393707,1393863..1394144))	Acanthamoeba castellanii str. Neff	14913366
ACA1_098050	CDS	ACA1_098050	NW_004457313.1	1394777	1396522	D	encoded by transcript ACA1_098050A; non-specific serine/threonine protein kinase	join(1394777..1394968,1395045..1395096,1395163..1395276,1395354..1395437,1395518..1395594,1395671..1396522)	Acanthamoeba castellanii str. Neff	14913458
ACA1_098060	CDS	ACA1_098060	NW_004457313.1	1396790	1397324	D	encoded by transcript ACA1_098060A; ribosomal L40e family	join(1396790..1396892,1396969..1397055,1397128..1397324)	Acanthamoeba castellanii str. Neff	14913229
ACA1_098070	CDS	ACA1_098070	NW_004457313.1	1397468	1398178	R	encoded by transcript ACA1_098070A; HCaRG protein	complement(join(1397468..1397680,1397729..1398178))	Acanthamoeba castellanii str. Neff	14913230
ACA1_098080	CDS	ACA1_098080	NW_004457313.1	1398486	1399045	D	encoded by transcript ACA1_098080A; eIF5A, putative	join(1398486..1398644,1398738..1398809,1398896..1399045)	Acanthamoeba castellanii str. Neff	14913231
ACA1_098090	CDS	ACA1_098090	NW_004457313.1	1399346	1400569	D	encoded by transcript ACA1_098090A; AIG2 family protein	join(1399346..1399452,1399563..1399713,1399823..1399876,1399951..1400060,1400188..1400569)	Acanthamoeba castellanii str. Neff	14913260
ACA1_098100	CDS	ACA1_098100	NW_004457313.1	1400927	1402432	R	encoded by transcript ACA1_098100A; serpin	complement(join(1400927..1401158,1401239..1401450,1401516..1401792,1401898..1402103,1402178..1402432))	Acanthamoeba castellanii str. Neff	14913261
ACA1_098110	CDS	ACA1_098110	NW_004457313.1	1402693	1404570	R	encoded by transcript ACA1_098110A; saccharopine dehydrogenase	complement(join(1402693..1402943,1403008..1403159,1403243..1403459,1403628..>1404570))	Acanthamoeba castellanii str. Neff	14913262
ACA1_098120	CDS	ACA1_098120	NW_004457313.1	1405072	1405549	D	encoded by transcript ACA1_098120A; uncharacterized protein	join(1405072..1405089,1405226..1405343,1405479..1405549)	Acanthamoeba castellanii str. Neff	14913263
ACA1_098130	CDS	ACA1_098130	NW_004457313.1	1405700	1407051	R	encoded by transcript ACA1_098130A; oxidoreductase, short chain dehydrogenase/reductase superfamily protein	complement(join(1405700..1405953,1406052..1406195,1406268..1406448,1406529..1406632,1406733..1407051))	Acanthamoeba castellanii str. Neff	14913264
ACA1_098140	CDS	ACA1_098140	NW_004457313.1	1407284	1408247	D	encoded by transcript ACA1_098140A; uncharacterized protein	join(1407284..1407458,1407557..1407652,1407738..1407920,1407997..1408247)	Acanthamoeba castellanii str. Neff	14913265
ACA1_098150	CDS	ACA1_098150	NW_004457313.1	1408302	1409495	R	encoded by transcript ACA1_098150A; uncharacterized protein	complement(1408302..1409495)	Acanthamoeba castellanii str. Neff	14913266
ACA1_098160	CDS	ACA1_098160	NW_004457313.1	1410212	1413119	R	encoded by transcript ACA1_098160A; ABC transporter, ATPbinding domain containing protein	complement(join(1410212..1410366,1410449..1410695,1410762..1410853,1410915..1411158,1411244..1411447,1411533..1411634,1411798..1411932,1412034..1412159,1412234..1412370,1412455..1412756,1412944..1413119))	Acanthamoeba castellanii str. Neff	14913604
ACA1_098170	CDS	ACA1_098170	NW_004457313.1	1413659	1415548	D	encoded by transcript ACA1_098170A; uncharacterized protein	join(1413659..1414327,1414403..1414660,1414737..1414823,1414881..1415006,1415087..1415548)	Acanthamoeba castellanii str. Neff	14913605
ACA1_098180	CDS	ACA1_098180	NW_004457313.1	1416553	1423246	D	encoded by transcript ACA1_098180A; serine/threonine kinase	join(1416553..1416562,1416629..1416771,1416850..1416915,1417123..1417425,1417515..1417671,1417757..1418158,1418224..1418336,1418425..1418589,1418692..1418760,1418844..1419117,1419195..1419542,1419614..1419821,1419899..1420004,1420081..1420197,1420319..1420625,1420928..1420979,1421073..1421608,1421628..1421650,1421670..1421994,1422088..1422819,1422921..1423246)	Acanthamoeba castellanii str. Neff	14913606
ACA1_098190	CDS	ACA1_098190	NW_004457313.1	1423281	1427099	R	encoded by transcript ACA1_098190A; uncharacterized protein	complement(join(1423281..1423897,1423984..1424143,1424231..1424437,1424533..1424618,1424727..1424889,1425020..1425232,1425317..1425428,1425531..1425678,1425766..1425935,1425996..1426102,1426191..1426325,1426446..1426779,1426858..1427099))	Acanthamoeba castellanii str. Neff	14913607
ACA1_098200	CDS	ACA1_098200	NW_004457313.1	1427357	1429226	D	encoded by transcript ACA1_098200A; uncharacterized protein	join(1427357..1427423,1427504..1427623,1427715..1427798,1427881..1427945,1428014..1428089,1428153..1428221,1428302..1428430,1428530..1428603,1428704..1428784,1428885..1429030,1429073..1429226)	Acanthamoeba castellanii str. Neff	14913608
ACA1_098210	CDS	ACA1_098210	NW_004457313.1	1429648	1431541	D	encoded by transcript ACA1_098210A; peroxidase, putative	join(1429648..1429750,1429832..1429951,1430018..1430101,1430196..1430260,1430333..1430408,1430482..1430550,1430631..1430759,1430851..1430924,1431017..1431097,1431201..1431313,1431388..1431541)	Acanthamoeba castellanii str. Neff	14913609
ACA1_098220	CDS	ACA1_098220	NW_004457313.1	1431615	1433512	R	encoded by transcript ACA1_098220A; uncharacterized protein	complement(join(1431615..1432294,1432495..1432856,1432945..1433046,1433124..1433250,1433350..1433512))	Acanthamoeba castellanii str. Neff	14913610
ACA1_098230	CDS	ACA1_098230	NW_004457313.1	1433617	1434207	R	encoded by transcript ACA1_098230A; leucine rich repeat domain containing protein	complement(join(1433617..1433747,1433833..1433935,1434007..1434207))	Acanthamoeba castellanii str. Neff	14913615
ACA1_098240	CDS	ACA1_098240	NW_004457313.1	1434856	1441229	D	encoded by transcript ACA1_098240A; serine/threonine kinase	join(1434856..1434946,1435029..1435315,1435439..1435729,1435806..1435962,1436084..1436598,1436697..1436861,1436948..1437016,1437082..1437355,1437373..1437411,1437427..1437774,1437847..1438057,1438135..1438240,1438334..1438450,1438611..1438917,1439014..1439065,1439160..1440088,1440163..1441229)	Acanthamoeba castellanii str. Neff	14913616
ACA1_098250	CDS	ACA1_098250	NW_004457313.1	1441373	1443896	R	encoded by transcript ACA1_098250A; WD domain, G-beta repeat-containing protein	complement(join(1441373..1441482,1441555..1441647,1441718..1441832,1441944..1442123,1442221..1442277,1442355..1442445,1442539..1442634,1442716..1442856,1442946..1443089,1443171..1443369,1443466..1443642,1443740..1443896))	Acanthamoeba castellanii str. Neff	14913617
ACA1_098260	CDS	ACA1_098260	NW_004457313.1	1444021	1448372	D	encoded by transcript ACA1_098260A; Mannosyl oligosaccharide glucosidase	join(1444021..1444081,1444345..1444449,1444564..1444716,1444817..1444917,1445034..1445106,1445231..1445358,1445735..1445966,1446051..1446136,1446219..1446296,1446438..1446597,1447181..1447324,1447456..1447552,1447635..1447723,1447832..1447867,1447939..1448049,1448215..1448372)	Acanthamoeba castellanii str. Neff	14913618
ACA1_098270	CDS	ACA1_098270	NW_004457313.1	1448622	1452528	D	encoded by transcript ACA1_098270A; Prokumamolisin, activation domain containing protein	join(1448622..1448677,1448748..1448843,1448942..1449056,1449164..1449263,1449333..1449439,1449592..1449651,1449737..1449781,1449869..1449968,1450056..1450192,1450326..1450452,1450927..1451028,1451125..1451197,1451300..1451358,1451493..1451666,1451789..1451871,1452209..1452358,1452469..1452528)	Acanthamoeba castellanii str. Neff	14913619
ACA1_098280	CDS	ACA1_098280	NW_004457313.1	1452767	1455641	D	encoded by transcript ACA1_098280A; copine, putative	join(1452767..1452808,1453007..1453062,1453174..1453371,1453484..1453570,1453681..1453820,1453961..1454088,1454202..1454335,1454415..1454496,1454590..1454703,1454796..1454873,1454980..1455069,1455137..1455287,1455565..1455641)	Acanthamoeba castellanii str. Neff	14913620
ACA1_318870	CDS	ACA1_318870	NW_004457312.1	851	7341	R	encoded by transcript ACA1_318870A; uncharacterized protein	complement(join(<851..1014,1068..1138,1248..1486,2328..2386,2476..2771,2853..2973,3085..3676,3766..3939,4049..4240,4406..4515,4688..4951,5195..5293,7252..7341))	Acanthamoeba castellanii str. Neff	14913097
ACA1_319080	CDS	ACA1_319080	NW_004457312.1	7606	8275	D	encoded by transcript ACA1_319080A; uncharacterized protein	join(7606..7728,7872..7937,8009..8275)	Acanthamoeba castellanii str. Neff	14913095
ACA1_319090	CDS	ACA1_319090	NW_004457312.1	8553	13115	D	encoded by transcript ACA1_319090A; C4dicarboxylate transporter/malic acid transport protein	join(8553..8737,8845..9151,9214..9387,9522..9898,9983..10117,10179..10333,10446..10540,10617..10781,10867..10957,11029..11152,11234..11311,11443..11718,11915..12080,12203..12292,12437..12565,12641..12722,12946..13115)	Acanthamoeba castellanii str. Neff	14913100
ACA1_319100	CDS	ACA1_319100	NW_004457312.1	13424	14884	D	encoded by transcript ACA1_319100A; uncharacterized protein	join(13424..13539,13628..13781,13858..14299,14392..14464,14524..14884)	Acanthamoeba castellanii str. Neff	14913098
ACA1_319110	CDS	ACA1_319110	NW_004457312.1	15234	16722	D	encoded by transcript ACA1_319110A; fidipidine, putative	join(15234..15430,15548..15833,15910..16035,16130..16342,16450..>16722)	Acanthamoeba castellanii str. Neff	14913099
ACA1_319220	CDS	ACA1_319220	NW_004457312.1	22648	23322	R	encoded by transcript ACA1_319220A; cellular apoptosis susceptibility protein	complement(join(<22648..22823,22899..>23322))	Acanthamoeba castellanii str. Neff	14913096
ACA1_309610	CDS	ACA1_309610	NW_004457311.1	26	535	D	encoded by transcript ACA1_309610A; Smad nuclearinteracting protein 1, putative	join(<26..76,181..296,376..535)	Acanthamoeba castellanii str. Neff	14913090
ACA1_309620	CDS	ACA1_309620	NW_004457311.1	1141	4063	D	encoded by transcript ACA1_309620A; sulfite reductase (NADPH), putative	join(1141..1291,1372..1463,1635..1736,1809..2004,2100..2241,2348..2435,2522..2746,2958..3162,3271..3418,3517..3685,3773..4063)	Acanthamoeba castellanii str. Neff	14913087
ACA1_309630	CDS	ACA1_309630	NW_004457311.1	4640	6855	D	encoded by transcript ACA1_309630A; uncharacterized protein	join(4640..5219,5298..5485,5602..5731,5822..6855)	Acanthamoeba castellanii str. Neff	14913093
ACA1_309640	CDS	ACA1_309640	NW_004457311.1	7051	8532	R	encoded by transcript ACA1_309640A; uncharacterized protein	complement(join(7051..7174,7251..7399,7465..7572,7678..7789,7905..7998,8115..8253,8341..8532))	Acanthamoeba castellanii str. Neff	14913094
ACA1_309650	CDS	ACA1_309650	NW_004457311.1	8851	10210	D	encoded by transcript ACA1_309650A; uncharacterized protein	join(8851..8949,9016..9144,9206..9882,9925..10210)	Acanthamoeba castellanii str. Neff	14913088
ACA1_309660	CDS	ACA1_309660	NW_004457311.1	11979	15326	D	encoded by transcript ACA1_309660A; uncharacterized protein	join(11979..12047,12159..12195,12283..12410,12487..12690,12757..12894,12966..13078,13165..13252,13368..13460,13540..13679,13805..13951,14057..14147,14271..14387,14498..14617,14699..14809,14937..15095,15183..15326)	Acanthamoeba castellanii str. Neff	14913089
ACA1_309680	CDS	ACA1_309680	NW_004457311.1	15470	16226	D	encoded by transcript ACA1_309680A; glycoside hydrolase family 3 protein	join(15470..15556,15638..15691,15766..16003,16090..16226)	Acanthamoeba castellanii str. Neff	14913091
ACA1_309690	CDS	ACA1_309690	NW_004457311.1	16257	17612	D	encoded by transcript ACA1_309690A; betaglucosidase-related glycosidase, putative	join(16257..16302,16380..16597,16684..16720,16731..16813,16898..17045,17157..17275,17356..17389,17407..17503,17579..>17612)	Acanthamoeba castellanii str. Neff	14913092
ACA1_297320	CDS	ACA1_297320	NW_004457310.1	466	980	D	encoded by transcript ACA1_297320A; uncharacterized protein	join(466..535,626..684,768..980)	Acanthamoeba castellanii str. Neff	14913085
ACA1_297430	CDS	ACA1_297430	NW_004457310.1	6198	9246	R	encoded by transcript ACA1_297430A; PH domain containing protein	complement(join(6198..6264,6336..6430,6500..6632,6719..6990,7094..7179,7279..7360,7420..7482,7587..7687,7762..7907,8000..8115,8329..8488,8573..8667,8742..8896,8989..9093,9162..9246))	Acanthamoeba castellanii str. Neff	14913086
ACA1_021050	CDS	ACA1_021050	NW_004457309.1	27	452	R	encoded by transcript ACA1_021050A; uncharacterized protein	complement(join(27..156,230..284,371..452))	Acanthamoeba castellanii str. Neff	14913081
ACA1_021160	CDS	ACA1_021160	NW_004457309.1	6348	6794	D	encoded by transcript ACA1_021160A; uncharacterized protein	join(6348..6406,6461..6531,6604..6794)	Acanthamoeba castellanii str. Neff	14913084
ACA1_021170	CDS	ACA1_021170	NW_004457309.1	7294	7808	D	encoded by transcript ACA1_021170A; uncharacterized protein	join(7294..7373,7439..7621,7802..7808)	Acanthamoeba castellanii str. Neff	14913082
ACA1_021280	CDS	ACA1_021280	NW_004457309.1	13737	14268	R	encoded by transcript ACA1_021280A; uncharacterized protein	complement(join(<13737..13791,13894..14158,14222..14268))	Acanthamoeba castellanii str. Neff	14913083
ACA1_329120	CDS	ACA1_329120	NW_004457308.1	995	2370	R	encoded by transcript ACA1_329120A; uncharacterized protein	complement(join(995..1055,1129..1193,1505..1609,1822..1934,2039..2125,2199..2370))	Acanthamoeba castellanii str. Neff	14913062
ACA1_329330	CDS	ACA1_329330	NW_004457308.1	2931	3777	R	encoded by transcript ACA1_329330A; uncharacterized protein	complement(join(2931..3031,3109..3380,3536..3777))	Acanthamoeba castellanii str. Neff	14913067
ACA1_329340	CDS	ACA1_329340	NW_004457308.1	4155	4744	D	encoded by transcript ACA1_329340A; uncharacterized protein	join(4155..4327,4419..4471,4581..>4744)	Acanthamoeba castellanii str. Neff	14913063
ACA1_329450	CDS	ACA1_329450	NW_004457308.1	12557	15391	R	encoded by transcript ACA1_329450A; uncharacterized protein	complement(join(<12557..12667,12784..12924,13008..13155,13254..13285,13405..13493,13568..13625,13861..13968,14046..14156,14241..14336,14413..14468,14558..14615,14728..14790,14887..14987,15070..15205,15323..15391))	Acanthamoeba castellanii str. Neff	14913064
ACA1_329460	CDS	ACA1_329460	NW_004457308.1	16190	16657	R	encoded by transcript ACA1_329460A; uncharacterized protein	complement(16190..16657)	Acanthamoeba castellanii str. Neff	14913068
ACA1_329470	CDS	ACA1_329470	NW_004457308.1	17199	19676	R	encoded by transcript ACA1_329470A; oxysterolbinding protein-like protein 8 isoform b, putative	complement(join(17199..17280,17378..17442,17743..17860,17982..18076,18163..18291,18406..18503,18662..18771,18859..18947,19061..19153,19226..19307,19387..19499,19548..19676))	Acanthamoeba castellanii str. Neff	14913069
ACA1_329480	CDS	ACA1_329480	NW_004457308.1	19958	21483	R	encoded by transcript ACA1_329480A; uncharacterized protein	complement(join(19958..20383,20444..21051,21153..21408,21478..21483))	Acanthamoeba castellanii str. Neff	14913079
ACA1_329490	CDS	ACA1_329490	NW_004457308.1	21771	23815	R	encoded by transcript ACA1_329490A; sitruin, putative	complement(join(21771..21875,21975..22009,22088..22181,22269..22346,22427..22542,22620..22743,22822..22890,22971..23037,23119..23184,23264..23336,23409..23549,23629..23815))	Acanthamoeba castellanii str. Neff	14913080
ACA1_329500	CDS	ACA1_329500	NW_004457308.1	24448	25730	D	encoded by transcript ACA1_329500A; uncharacterized protein	join(24448..24603,24710..24786,24882..25008,25113..25420,25499..25730)	Acanthamoeba castellanii str. Neff	14913065
ACA1_329510	CDS	ACA1_329510	NW_004457308.1	26369	31840	D	encoded by transcript ACA1_329510A; paired amphipathic helix protein sin3, putative	join(26369..26445,26661..26715,26878..27020,27109..27212,27276..27370,27447..27563,27645..27760,27836..27917,27992..28195,28278..28368,28446..28561,28640..28776,28792..28916,28988..29065,29148..29239,29422..29449,29522..29694,29776..29916,29984..30073,30164..30319,30415..30510,30625..30819,30909..31049,31160..31479,31589..31726,31831..31840)	Acanthamoeba castellanii str. Neff	14913066
ACA1_329620	CDS	ACA1_329620	NW_004457308.1	32227	32796	R	encoded by transcript ACA1_329620A; uncharacterized protein	complement(32227..32796)	Acanthamoeba castellanii str. Neff	14913072
ACA1_329630	CDS	ACA1_329630	NW_004457308.1	33077	33637	R	encoded by transcript ACA1_329630A; uncharacterized protein	complement(33077..33637)	Acanthamoeba castellanii str. Neff	14913073
ACA1_329640	CDS	ACA1_329640	NW_004457308.1	33820	37248	D	encoded by transcript ACA1_329640A; barren protein	join(33820..34069,34186..34292,34413..34644,34733..34986,35070..35528,35607..35787,35863..36083,36198..36297,36370..36533,36614..36820,36923..37012,37090..37248)	Acanthamoeba castellanii str. Neff	14913074
ACA1_329650	CDS	ACA1_329650	NW_004457308.1	37374	38261	R	encoded by transcript ACA1_329650A; uncharacterized protein	complement(join(37374..37527,37590..37662,37727..37827,37915..37997,38062..38124,38217..38261))	Acanthamoeba castellanii str. Neff	14913075
ACA1_329660	CDS	ACA1_329660	NW_004457308.1	38826	44518	D	encoded by transcript ACA1_329660A; putative ubiquitin carboxylterminal hydrolase 11, putative	join(38826..39183,39313..39499,39626..39689,39772..39829,39925..40034,40133..40316,40418..40635,40749..40848,40975..41044,41148..41218,41306..41463,41566..41658,41719..41849,41954..42295,42433..42484,42553..42675,42842..43077,43208..43319,43450..43583,43713..44364,44459..44518)	Acanthamoeba castellanii str. Neff	14913076
ACA1_329670	CDS	ACA1_329670	NW_004457308.1	44606	47049	D	encoded by transcript ACA1_329670A; Ser/Thr phosphatase family superfamily protein	join(44606..45017,45107..45349,45467..45809,45886..46022,46127..46197,46318..46436,46543..46605,46698..46755,46936..47049)	Acanthamoeba castellanii str. Neff	14913070
ACA1_329680	CDS	ACA1_329680	NW_004457308.1	47686	50717	R	encoded by transcript ACA1_329680A; glycoside hydrolase 15like protein	complement(join(47686..47779,47885..48097,48223..48301,48386..48523,48634..48755,48850..48950,49028..49223,49317..49504,49572..49656,49737..49904,50005..50079,50196..50256,50345..50717))	Acanthamoeba castellanii str. Neff	14913071
ACA1_329690	CDS	ACA1_329690	NW_004457308.1	51231	52015	R	encoded by transcript ACA1_329690A; uncharacterized protein	complement(join(51231..51368,51411..51956,51980..52015))	Acanthamoeba castellanii str. Neff	14913077
ACA1_329700	CDS	ACA1_329700	NW_004457308.1	52163	53617	D	encoded by transcript ACA1_329700A; electron transfer flavoprotein alphasubunit	join(52163..52313,52409..52679,52794..52884,52972..53182,53259..53369,53454..53617)	Acanthamoeba castellanii str. Neff	14913078
ACA1_329710	CDS	ACA1_329710	NW_004457308.1	53719	54321	R	encoded by transcript ACA1_329710A; uncharacterized protein	complement(53719..>54321)	Acanthamoeba castellanii str. Neff	14913061
ACA1_156020	CDS	ACA1_156020	NW_004457307.1	3774	4432	R	encoded by transcript ACA1_156020A; AT hook motif domain containing protein	complement(join(<3774..3918,4055..4185,4368..4432))	Acanthamoeba castellanii str. Neff	14913051
ACA1_156030	CDS	ACA1_156030	NW_004457307.1	4742	9284	D	encoded by transcript ACA1_156030A; uncharacterized protein	join(4742..4825,4922..5024,5105..5332,5404..5472,5548..5631,5707..5781,5868..6011,6099..6173,6257..6311,6392..6458,6555..6633,6714..6802,6891..7251,7325..7948,8032..9117,9205..9284)	Acanthamoeba castellanii str. Neff	14913038
ACA1_156040	CDS	ACA1_156040	NW_004457307.1	9479	12310	D	encoded by transcript ACA1_156040A; fungal Zn(2)-Cys(6) binuclear cluster domain containing protein	join(9479..9573,9824..9936,10062..11284,11381..11466,11548..11662,11734..11823,12077..12310)	Acanthamoeba castellanii str. Neff	14913039
ACA1_156050	CDS	ACA1_156050	NW_004457307.1	12694	15110	D	encoded by transcript ACA1_156050A; Armadillo/betacatenin-like repeat domain containing protein	join(12694..13054,13127..13246,13326..13454,13547..13678,13716..13874,13935..14060,14127..14255,14319..14447,14505..14590,14656..14695,14750..14875,14953..15110)	Acanthamoeba castellanii str. Neff	14913037
ACA1_156060	CDS	ACA1_156060	NW_004457307.1	15951	18037	D	encoded by transcript ACA1_156060A; uncharacterized protein	join(15951..15976,16094..16221,16374..17040,17122..17233,17326..17529,17624..17698,17791..17861,17872..18037)	Acanthamoeba castellanii str. Neff	14913040
ACA1_156070	CDS	ACA1_156070	NW_004457307.1	18073	18898	R	encoded by transcript ACA1_156070A; Aminoacylase	complement(join(18073..18227,18301..18384,18506..18660,18774..18898))	Acanthamoeba castellanii str. Neff	14913034
ACA1_156080	CDS	ACA1_156080	NW_004457307.1	18921	20253	R	encoded by transcript ACA1_156080A; aminoacylase 1, putative	complement(join(18921..18970,18983..19053,19115..19248,19326..19463,19549..19641,19746..19814,19877..19978,20059..20253))	Acanthamoeba castellanii str. Neff	14913035
ACA1_156090	CDS	ACA1_156090	NW_004457307.1	20478	22595	D	encoded by transcript ACA1_156090A; gamma-glutamyltranspeptidase	join(20478..20542,20627..20757,20829..20966,21129..21610,21692..21811,21923..22057,22204..22232,22316..22392,22534..22595)	Acanthamoeba castellanii str. Neff	14913036
ACA1_156200	CDS	ACA1_156200	NW_004457307.1	22917	24683	D	encoded by transcript ACA1_156200A; MT-A70 protein	join(22917..23438,23554..23666,23782..24188,24277..24394,24521..24683)	Acanthamoeba castellanii str. Neff	14913059
ACA1_156210	CDS	ACA1_156210	NW_004457307.1	24982	27264	R	encoded by transcript ACA1_156210A; uncharacterized protein	complement(join(24982..25207,25274..25371,25445..25506,25643..25765,25828..25925,26001..26149,26251..26485,26598..26696,26820..26890,26980..27079,27206..27264))	Acanthamoeba castellanii str. Neff	14913060
ACA1_156320	CDS	ACA1_156320	NW_004457307.1	31386	33626	D	encoded by transcript ACA1_156320A; uncharacterized protein	join(31386..31553,31624..31680,32206..32251,32313..32440,32611..32749,32993..33099,33549..33626)	Acanthamoeba castellanii str. Neff	14913045
ACA1_156330	CDS	ACA1_156330	NW_004457307.1	35212	35557	D	encoded by transcript ACA1_156330A; uncharacterized protein	join(35212..35335,35430..35557)	Acanthamoeba castellanii str. Neff	14913046
ACA1_156340	CDS	ACA1_156340	NW_004457307.1	35673	36362	D	encoded by transcript ACA1_156340A; ankyrin repeat protein	join(35673..35775,35854..36011,36100..36215,36239..36362)	Acanthamoeba castellanii str. Neff	14913047
ACA1_156350	CDS	ACA1_156350	NW_004457307.1	36737	36898	R	encoded by transcript ACA1_156350A; uncharacterized protein	complement(36737..36898)	Acanthamoeba castellanii str. Neff	14913056
ACA1_156460	CDS	ACA1_156460	NW_004457307.1	41355	41671	D	encoded by transcript ACA1_156460A; uncharacterized protein	join(41355..41420,41507..41671)	Acanthamoeba castellanii str. Neff	14913057
ACA1_156470	CDS	ACA1_156470	NW_004457307.1	41855	43021	R	encoded by transcript ACA1_156470A; uncharacterized protein	complement(join(41855..41920,42018..42358,42475..42572,42756..43021))	Acanthamoeba castellanii str. Neff	14913058
ACA1_156480	CDS	ACA1_156480	NW_004457307.1	43618	45461	D	encoded by transcript ACA1_156480A; SPFH domain / Band 7 family protein	join(43618..43716,43834..43942,44043..44146,44239..44530,44607..44699,44792..44890,45001..45227,45333..45461)	Acanthamoeba castellanii str. Neff	14913048
ACA1_156490	CDS	ACA1_156490	NW_004457307.1	46651	54147	D	encoded by transcript ACA1_156490A; RasGEF domain containing protein	join(46651..46665,46680..46809,46892..47038,47105..47289,47354..47459,47541..47595,47895..48025,48122..48247,48371..48526,48839..49088,49175..49340,49438..49483,49556..49630,49725..49853,49928..50065,50180..50307,50394..50535,50620..50752,50840..50912,50993..51070,51156..51317,51390..51473,51555..51644,51715..51807,51915..52016,52289..52362,52450..52522,52603..52680,52757..52918,52992..53075,53402..53494,53602..53794,53966..54147)	Acanthamoeba castellanii str. Neff	14913049
ACA1_156700	CDS	ACA1_156700	NW_004457307.1	54954	56408	D	encoded by transcript ACA1_156700A; Proteintyrosine phosphatase	join(54954..55070,55154..55202,55268..55368,55455..55514,55636..55696,55786..55893,55977..56039,56122..56287,56372..56408)	Acanthamoeba castellanii str. Neff	14913050
ACA1_156720	CDS	ACA1_156720	NW_004457307.1	58025	59377	D	encoded by transcript ACA1_156720A; dioxygenase subfamily protein	join(58025..58112,58196..58346,58453..58738,58838..59377)	Acanthamoeba castellanii str. Neff	14913052
ACA1_156730	CDS	ACA1_156730	NW_004457307.1	59624	60827	R	encoded by transcript ACA1_156730A; uncharacterized protein	complement(join(59624..60437,60514..60552,60619..60827))	Acanthamoeba castellanii str. Neff	14913053
ACA1_156740	CDS	ACA1_156740	NW_004457307.1	61832	62234	D	encoded by transcript ACA1_156740A; uncharacterized protein	join(61832..61924,62023..62064,62156..62202,62222..62234)	Acanthamoeba castellanii str. Neff	14913054
ACA1_156750	CDS	ACA1_156750	NW_004457307.1	62994	63493	D	encoded by transcript ACA1_156750A; uncharacterized protein	62994..>63493	Acanthamoeba castellanii str. Neff	14913041
ACA1_156860	CDS	ACA1_156860	NW_004457307.1	63850	64815	R	encoded by transcript ACA1_156860A; uncharacterized protein	complement(join(63850..64423,64499..64537,64604..64815))	Acanthamoeba castellanii str. Neff	14913042
ACA1_156870	CDS	ACA1_156870	NW_004457307.1	65943	66623	D	encoded by transcript ACA1_156870A; FAD/FMNcontaining oxidoreductase	join(65943..65990,66056..66142,66213..66305,66441..66623)	Acanthamoeba castellanii str. Neff	14913043
ACA1_157080	CDS	ACA1_157080	NW_004457307.1	73510	80709	R	encoded by transcript ACA1_157080A; serine/threonine protein kinase	complement(join(73510..74126,74231..74719,74804..75057,75176..76139,76239..76335,76430..76546,76626..76885,76995..77148,77176..77236,77314..77461,77568..77700,77808..77855,78020..78261,78336..78670,78770..79083,79189..79506,79595..79732,79882..79939,80017..80119,80541..80709))	Acanthamoeba castellanii str. Neff	14913044
ACA1_028150	CDS	ACA1_028150	NW_004457306.1	8311	9229	R	encoded by transcript ACA1_028150A; uncharacterized protein	complement(join(8311..8435,8529..8636,8712..8750,8977..9069,9157..9229))	Acanthamoeba castellanii str. Neff	14913023
ACA1_028160	CDS	ACA1_028160	NW_004457306.1	9779	13317	D	encoded by transcript ACA1_028160A; uncharacterized protein	join(9779..10201,10308..10390,10485..11124,11204..11318,11413..11538,11664..11998,12082..12223,12317..12406,12481..12545,12615..12708,12781..12847,12943..13058,13136..13317)	Acanthamoeba castellanii str. Neff	14913024
ACA1_028170	CDS	ACA1_028170	NW_004457306.1	13832	15423	D	encoded by transcript ACA1_028170A; uncharacterized protein	join(13832..14131,14266..14544,14560..14633,14711..15180,15407..15423)	Acanthamoeba castellanii str. Neff	14913033
ACA1_028180	CDS	ACA1_028180	NW_004457306.1	15590	16509	D	encoded by transcript ACA1_028180A; glutathione stransferase p, putative	join(15590..15716,15776..15817,15872..15981,16037..16090,16159..16284,16351..16509)	Acanthamoeba castellanii str. Neff	14913029
ACA1_028190	CDS	ACA1_028190	NW_004457306.1	17040	19272	R	encoded by transcript ACA1_028190A; chromatin assembly factor 1, subunit B, putative	complement(join(17040..17181,17265..17375,17470..17586,17651..17767,17856..17936,18005..18066,18129..18309,18707..18818,18987..19092,19162..19272))	Acanthamoeba castellanii str. Neff	14913025
ACA1_028300	CDS	ACA1_028300	NW_004457306.1	19369	20699	R	encoded by transcript ACA1_028300A; BTB/POZ domain containing protein	complement(join(19369..19601,19672..19875,19944..20097,20177..20272,20334..20699))	Acanthamoeba castellanii str. Neff	14913032
ACA1_028310	CDS	ACA1_028310	NW_004457306.1	20755	21833	R	encoded by transcript ACA1_028310A; kelch repeat-containing protein	complement(join(20755..20962,21026..21182,21473..21622,21692..21833))	Acanthamoeba castellanii str. Neff	14913030
ACA1_028530	CDS	ACA1_028530	NW_004457306.1	23370	24732	D	encoded by transcript ACA1_028530A; uncharacterized protein	join(23370..23422,23506..23740,23781..23897,23976..24077,24179..24307,24445..24618,24655..24732)	Acanthamoeba castellanii str. Neff	14913026
ACA1_028540	CDS	ACA1_028540	NW_004457306.1	25039	25936	D	encoded by transcript ACA1_028540A; GTP cyclohydrolase I, putative	join(25039..25631,25715..25792,25873..25936)	Acanthamoeba castellanii str. Neff	14913027
ACA1_309470	CDS	ACA1_309470	NW_004457305.1	711	2920	D	encoded by transcript ACA1_309470A; leucine rich repeat domain containing protein	join(711..969,1044..1109,1181..1252,1340..1667,1754..1844,1937..2920)	Acanthamoeba castellanii str. Neff	14913017
ACA1_309480	CDS	ACA1_309480	NW_004457305.1	3342	5689	D	encoded by transcript ACA1_309480A; CMF receptor CMFR1, putative	join(3342..3479,3547..3639,3748..3879,3952..4049,4169..4268,4354..4411,4495..4606,4684..4870,4968..5302,5515..5689)	Acanthamoeba castellanii str. Neff	14913019
ACA1_309490	CDS	ACA1_309490	NW_004457305.1	5947	7085	D	encoded by transcript ACA1_309490A; clathrin adaptor complex small chain subfamily protein	join(5947..5970,6262..6403,6532..6679,6760..6855,6935..7085)	Acanthamoeba castellanii str. Neff	14913018
ACA1_309500	CDS	ACA1_309500	NW_004457305.1	8084	11253	D	encoded by transcript ACA1_309500A; pyridine nucleotidedisulfide oxidoreductase domain containing protein	join(<8084..8213,8285..8353,8430..8572,8656..8738,8874..8986,9084..9218,9326..9393,9477..9555,9653..9772,9850..9901,9989..10113,10176..10298,10396..10472,10534..10728,10803..10938,11014..11093,11173..11253)	Acanthamoeba castellanii str. Neff	14913020
ACA1_309510	CDS	ACA1_309510	NW_004457305.1	11643	12027	D	encoded by transcript ACA1_309510A; ribosomal protein s27, putative	join(11643..11681,11697..11834,11920..12027)	Acanthamoeba castellanii str. Neff	14913021
ACA1_050620	CDS	ACA1_050620	NW_004457304.1	58	1482	D	encoded by transcript ACA1_050620A; TFIIH basal transcription factor complex subunit 2, putative	join(58..137,215..389,465..550,620..749,850..981,1084..1228,1316..1482)	Acanthamoeba castellanii str. Neff	14913016
ACA1_050630	CDS	ACA1_050630	NW_004457304.1	2364	3333	R	encoded by transcript ACA1_050630A; uncharacterized protein	complement(join(2364..2549,2624..2686,2800..2899,2994..3145,3235..3333))	Acanthamoeba castellanii str. Neff	14913015
ACA1_050750	CDS	ACA1_050750	NW_004457304.1	8321	9283	R	encoded by transcript ACA1_050750A; uncharacterized protein	complement(join(8321..8486,8565..9283))	Acanthamoeba castellanii str. Neff	14913012
ACA1_050760	CDS	ACA1_050760	NW_004457304.1	9764	11455	R	encoded by transcript ACA1_050760A; thiamine pyrophosphokinase	complement(join(9764..10191,10277..10421,10506..10625,10719..10814,10896..10968,11030..11090,11158..11455))	Acanthamoeba castellanii str. Neff	14913013
ACA1_346250	CDS	ACA1_346250	NW_004457303.1	26	2821	D	encoded by transcript ACA1_346250A; uncharacterized protein	join(<26..149,294..433,465..623,703..1071,1105..1185,1826..2003,2123..2182,2206..2261,2333..2425,2534..>2821)	Acanthamoeba castellanii str. Neff	14913006
ACA1_346360	CDS	ACA1_346360	NW_004457303.1	7374	7559	R	encoded by transcript ACA1_346360A; uncharacterized protein	complement(<7374..7559)	Acanthamoeba castellanii str. Neff	14913011
ACA1_346470	CDS	ACA1_346470	NW_004457303.1	14420	15626	R	encoded by transcript ACA1_346470A; RUN domain containing protein	complement(join(14420..14434,14527..14635,14762..14852,14926..14992,15108..15178,15332..15392,15519..15626))	Acanthamoeba castellanii str. Neff	14912995
ACA1_346480	CDS	ACA1_346480	NW_004457303.1	16518	18104	R	encoded by transcript ACA1_346480A; protein kinase domain containing protein	complement(join(16518..17506,17921..18104))	Acanthamoeba castellanii str. Neff	14913000
ACA1_346490	CDS	ACA1_346490	NW_004457303.1	19476	22255	R	encoded by transcript ACA1_346490A; uncharacterized protein	complement(join(19476..19599,19696..19858,19935..20040,20098..20179,20258..20629,20694..20791,20859..22049,22214..22255))	Acanthamoeba castellanii str. Neff	14913001
ACA1_346500	CDS	ACA1_346500	NW_004457303.1	22861	25413	R	encoded by transcript ACA1_346500A; tetratricopeptide repeat domain containing protein	complement(join(22861..22914,23021..23085,23167..23312,23394..23448,23546..23685,23771..23834,23906..23974,24044..24136,24242..24440,24514..24835,24940..24991,25070..25126,25194..25413))	Acanthamoeba castellanii str. Neff	14912996
ACA1_346610	CDS	ACA1_346610	NW_004457303.1	27646	30105	D	encoded by transcript ACA1_346610A; RhoGEF domain containing protein	join(27646..27872,28063..28225,28335..28519,29683..29753,29846..30105)	Acanthamoeba castellanii str. Neff	14912997
ACA1_346730	CDS	ACA1_346730	NW_004457303.1	31628	31968	R	encoded by transcript ACA1_346730A; uncharacterized protein	complement(join(31628..31723,31756..31968))	Acanthamoeba castellanii str. Neff	14913008
ACA1_346840	CDS	ACA1_346840	NW_004457303.1	35471	35883	R	encoded by transcript ACA1_346840A; uncharacterized protein	complement(join(35471..35476,35532..35725,35868..35883))	Acanthamoeba castellanii str. Neff	14913009
ACA1_346850	CDS	ACA1_346850	NW_004457303.1	36086	36553	R	encoded by transcript ACA1_346850A; uncharacterized protein	complement(36086..36553)	Acanthamoeba castellanii str. Neff	14913010
ACA1_346860	CDS	ACA1_346860	NW_004457303.1	36838	37428	R	encoded by transcript ACA1_346860A; uncharacterized protein	complement(36838..37428)	Acanthamoeba castellanii str. Neff	14913002
ACA1_346870	CDS	ACA1_346870	NW_004457303.1	38229	38626	R	encoded by transcript ACA1_346870A; uncharacterized protein	complement(join(38229..38236,38369..38537,38609..38626))	Acanthamoeba castellanii str. Neff	14913003
ACA1_346880	CDS	ACA1_346880	NW_004457303.1	39028	39440	R	encoded by transcript ACA1_346880A; uncharacterized protein	complement(join(39028..39174,39384..39440))	Acanthamoeba castellanii str. Neff	14913004
ACA1_346890	CDS	ACA1_346890	NW_004457303.1	39661	40029	R	encoded by transcript ACA1_346890A; uncharacterized protein	complement(join(39661..39703,39782..39833,39894..40029))	Acanthamoeba castellanii str. Neff	14913005
ACA1_346900	CDS	ACA1_346900	NW_004457303.1	40226	42187	D	encoded by transcript ACA1_346900A; HEAT repeat domain containing protein	join(40226..40575,40637..40777,40830..41013,41097..41175,41237..41392,41466..41551,41630..41740,41801..41959,42023..42187)	Acanthamoeba castellanii str. Neff	14912998
ACA1_346910	CDS	ACA1_346910	NW_004457303.1	42378	44132	R	encoded by transcript ACA1_346910A; RhoGEF domain containing protein	complement(join(42378..42722,42795..43028,43109..43309,43438..43753,43852..>44132))	Acanthamoeba castellanii str. Neff	14912999
ACA1_329820	CDS	ACA1_329820	NW_004457302.1	3218	5927	R	encoded by transcript ACA1_329820A; transporter, major facilitator subfamily protein	complement(join(3218..3372,3462..3551,3654..3707,3809..3904,4014..4095,4215..4279,4613..4783,4879..4977,5095..5308,5415..5512,5631..5717,5825..5927))	Acanthamoeba castellanii str. Neff	14912966
ACA1_329830	CDS	ACA1_329830	NW_004457302.1	6406	8270	R	encoded by transcript ACA1_329830A; uncharacterized protein	complement(join(6406..6535,6629..6715,6877..6955,7069..7646,7748..7837,7933..8032,8171..8270))	Acanthamoeba castellanii str. Neff	14912967
ACA1_329840	CDS	ACA1_329840	NW_004457302.1	9256	11160	D	encoded by transcript ACA1_329840A; uncharacterized protein	join(9256..9263,9285..9303,9327..9753,9835..10060,10249..10372,10453..10552,10955..11160)	Acanthamoeba castellanii str. Neff	14912974
ACA1_329850	CDS	ACA1_329850	NW_004457302.1	11233	13462	R	encoded by transcript ACA1_329850A; uncharacterized protein	complement(join(11233..11472,11582..11733,11836..11934,12017..12158,12276..12310,12412..12510,12593..12734,12837..12926,13074..13172,13301..13406,13437..13462))	Acanthamoeba castellanii str. Neff	14912975
ACA1_329960	CDS	ACA1_329960	NW_004457302.1	15607	20348	D	encoded by transcript ACA1_329960A; MBOAT family protein	join(15607..16242,16358..16485,16603..16656,16742..16840,16928..17031,17103..17245,17452..17563,17677..18537,18647..18852,19045..19205,19278..19296,19333..19458,19575..19689,19816..20013,20056..20348)	Acanthamoeba castellanii str. Neff	14912980
ACA1_329980	CDS	ACA1_329980	NW_004457302.1	24158	25566	D	encoded by transcript ACA1_329980A; uncharacterized protein	join(24158..24190,24306..24404,24491..24594,24694..24836,24929..24992,25110..25566)	Acanthamoeba castellanii str. Neff	14912988
ACA1_330090	CDS	ACA1_330090	NW_004457302.1	27656	28734	D	encoded by transcript ACA1_330090A; Kinesin motor domain containing protein	join(27656..27749,27816..27878,27953..28053,28141..28426,28565..28734)	Acanthamoeba castellanii str. Neff	14912987
ACA1_330100	CDS	ACA1_330100	NW_004457302.1	29202	29974	D	encoded by transcript ACA1_330100A; universal stress domain containing protein	join(29202..29323,29480..29531,29605..29723,29797..29974)	Acanthamoeba castellanii str. Neff	14912989
ACA1_330110	CDS	ACA1_330110	NW_004457302.1	32481	34849	D	encoded by transcript ACA1_330110A; uncharacterized protein	join(32481..32489,32578..33965,34088..34193,34313..34432,34525..34817,34840..34849)	Acanthamoeba castellanii str. Neff	14912990
ACA1_330320	CDS	ACA1_330320	NW_004457302.1	35083	40489	D	encoded by transcript ACA1_330320A; kinesin motor domain containing protein	join(35083..35115,35202..35498,35552..35659,35742..35867,35958..36047,36120..36179,36261..36654,36721..37791,37877..39005,39097..39202,39318..39437,39533..40489)	Acanthamoeba castellanii str. Neff	14912991
ACA1_330330	CDS	ACA1_330330	NW_004457302.1	40688	41140	D	encoded by transcript ACA1_330330A; uncharacterized protein	join(40688..40853,40926..41140)	Acanthamoeba castellanii str. Neff	14912968
ACA1_330340	CDS	ACA1_330340	NW_004457302.1	41247	43167	R	encoded by transcript ACA1_330340A; uncharacterized protein	complement(join(41247..41370,41481..41605,41819..41881,42002..42105,42246..42711,42804..42924,43043..43167))	Acanthamoeba castellanii str. Neff	14912969
ACA1_330350	CDS	ACA1_330350	NW_004457302.1	43532	45273	R	encoded by transcript ACA1_330350A; SEP domain containing protein	complement(join(43532..43838,43994..44131,44211..44409,44485..44555,44672..44839,44954..45093,45172..45273))	Acanthamoeba castellanii str. Neff	14912970
ACA1_330360	CDS	ACA1_330360	NW_004457302.1	45670	47302	D	encoded by transcript ACA1_330360A; uncharacterized protein	join(45670..46113,46201..46434,46529..47302)	Acanthamoeba castellanii str. Neff	14912972
ACA1_330370	CDS	ACA1_330370	NW_004457302.1	47381	48922	R	encoded by transcript ACA1_330370A; Fbox domain containing protein	complement(join(47381..47521,47604..47847,48007..48108,48175..48448,48559..>48922))	Acanthamoeba castellanii str. Neff	14912973
ACA1_330380	CDS	ACA1_330380	NW_004457302.1	49026	50586	D	encoded by transcript ACA1_330380A; uncharacterized protein	join(49026..49141,49212..49372,49461..49993,50101..50175,50254..50359,50435..50586)	Acanthamoeba castellanii str. Neff	14912977
ACA1_330390	CDS	ACA1_330390	NW_004457302.1	50677	52210	D	encoded by transcript ACA1_330390A; uncharacterized protein	join(50677..50684,50768..50901,51227..51316,51683..52008,52106..52210)	Acanthamoeba castellanii str. Neff	14912978
ACA1_330400	CDS	ACA1_330400	NW_004457302.1	52079	53663	R	encoded by transcript ACA1_330400A; uncharacterized protein	complement(join(52079..52234,52346..52399,52478..52553,52655..52801,52938..53026,53148..53302,53381..53663))	Acanthamoeba castellanii str. Neff	14912979
ACA1_330410	CDS	ACA1_330410	NW_004457302.1	53721	54353	D	encoded by transcript ACA1_330410A; uncharacterized protein	join(53721..53858,53948..54038,54139..54353)	Acanthamoeba castellanii str. Neff	14912984
ACA1_330420	CDS	ACA1_330420	NW_004457302.1	54454	56610	R	encoded by transcript ACA1_330420A; Ca2+dependent endoplasmic reticulum nucleoside diphosphatase isoform 3, putative	complement(join(54454..54478,54581..54644,54752..54857,54964..55059,55178..55280,55359..55453,55526..55609,55708..55778,55864..55969,56044..56133,56197..56274,56351..56503,56572..56610))	Acanthamoeba castellanii str. Neff	14912985
ACA1_330530	CDS	ACA1_330530	NW_004457302.1	59663	59965	R	encoded by transcript ACA1_330530A; CsbD family protein	complement(59663..59965)	Acanthamoeba castellanii str. Neff	14912986
ACA1_330540	CDS	ACA1_330540	NW_004457302.1	60290	61155	R	encoded by transcript ACA1_330540A; uncharacterized protein	complement(join(60290..60419,60536..60631,60755..60866,60955..60998,61088..61155))	Acanthamoeba castellanii str. Neff	14912993
ACA1_330550	CDS	ACA1_330550	NW_004457302.1	61385	63509	R	encoded by transcript ACA1_330550A; Nucleoside-diphosphatase	complement(join(61385..61505,61606..61811,61968..62107,62217..62400,62602..62672,62760..62865,62960..63025,63099..63176,63253..63405,63471..63509))	Acanthamoeba castellanii str. Neff	14912994
ACA1_330660	CDS	ACA1_330660	NW_004457302.1	64106	66128	D	encoded by transcript ACA1_330660A; SNARE associated Golgi protein	join(64106..64445,64585..64808,64902..64973,65155..65252,65373..65509,66121..66128)	Acanthamoeba castellanii str. Neff	14912981
ACA1_330770	CDS	ACA1_330770	NW_004457302.1	66561	66863	R	encoded by transcript ACA1_330770A; CsbD family protein	complement(66561..66863)	Acanthamoeba castellanii str. Neff	14912982
ACA1_330780	CDS	ACA1_330780	NW_004457302.1	67083	67584	R	encoded by transcript ACA1_330780A; uncharacterized protein	complement(join(67083..67128,67176..67287,67383..67426,67517..67584))	Acanthamoeba castellanii str. Neff	14912983
ACA1_330890	CDS	ACA1_330890	NW_004457302.1	72665	74969	D	encoded by transcript ACA1_330890A; uncharacterized protein	join(72665..72871,73095..73640,73779..73864,73955..74150,74239..74490,74621..74711,74818..>74969)	Acanthamoeba castellanii str. Neff	14912976
ACA1_168360	CDS	ACA1_168360	NW_004457301.1	8986	9237	R	encoded by transcript ACA1_168360A; uncharacterized protein	complement(join(8986..9110,9153..9237))	Acanthamoeba castellanii str. Neff	14912961
ACA1_168470	CDS	ACA1_168470	NW_004457301.1	12726	13000	R	encoded by transcript ACA1_168470A; uncharacterized protein	complement(join(12726..12863,12956..13000))	Acanthamoeba castellanii str. Neff	14912963
ACA1_168480	CDS	ACA1_168480	NW_004457301.1	16195	17118	R	encoded by transcript ACA1_168480A; uncharacterized protein	complement(join(16195..16335,16479..16588,16691..16734,16812..16943,16988..>17118))	Acanthamoeba castellanii str. Neff	14912962
ACA1_168590	CDS	ACA1_168590	NW_004457301.1	24038	24790	D	encoded by transcript ACA1_168590A; uncharacterized protein	join(24038..24155,24217..24372,24549..24668,24735..24790)	Acanthamoeba castellanii str. Neff	14912964
ACA1_168700	CDS	ACA1_168700	NW_004457301.1	30231	30610	R	encoded by transcript ACA1_168700A; uncharacterized protein	complement(join(30231..30452,30536..30610))	Acanthamoeba castellanii str. Neff	14912965
ACA1_324680	CDS	ACA1_324680	NW_004457300.1	245	433	D	encoded by transcript ACA1_324680A; uncharacterized protein	245..433	Acanthamoeba castellanii str. Neff	14912940
ACA1_324710	CDS	ACA1_324710	NW_004457300.1	12562	14548	R	encoded by transcript ACA1_324710A; uncharacterized protein	complement(join(12562..13480,13527..14548))	Acanthamoeba castellanii str. Neff	14912946
ACA1_324720	CDS	ACA1_324720	NW_004457300.1	14686	15136	D	encoded by transcript ACA1_324720A; uncharacterized protein	join(14686..14915,14953..15136)	Acanthamoeba castellanii str. Neff	14912947
ACA1_324730	CDS	ACA1_324730	NW_004457300.1	17436	19393	D	encoded by transcript ACA1_324730A; XPG Iregion domain containing protein	join(17436..17470,17512..18220,18456..19258,19285..19393)	Acanthamoeba castellanii str. Neff	14912959
ACA1_324740	CDS	ACA1_324740	NW_004457300.1	20199	21623	R	encoded by transcript ACA1_324740A; HD domain containing protein	complement(20199..21623)	Acanthamoeba castellanii str. Neff	14912960
ACA1_324750	CDS	ACA1_324750	NW_004457300.1	21858	22842	R	encoded by transcript ACA1_324750A; uncharacterized protein	complement(join(21858..22768,22788..22842))	Acanthamoeba castellanii str. Neff	14912938
ACA1_324770	CDS	ACA1_324770	NW_004457300.1	24497	25421	R	encoded by transcript ACA1_324770A; uncharacterized protein	complement(join(24497..25206,25343..25421))	Acanthamoeba castellanii str. Neff	14912948
ACA1_324780	CDS	ACA1_324780	NW_004457300.1	25592	26245	D	encoded by transcript ACA1_324780A; exonuclease rnase t and dna polymerase iii, putative	25592..26245	Acanthamoeba castellanii str. Neff	14912949
ACA1_324790	CDS	ACA1_324790	NW_004457300.1	27153	27524	D	encoded by transcript ACA1_324790A; DNA repair family protein	27153..27524	Acanthamoeba castellanii str. Neff	14912950
ACA1_324810	CDS	ACA1_324810	NW_004457300.1	31143	31889	D	encoded by transcript ACA1_324810A; uncharacterized protein	31143..31889	Acanthamoeba castellanii str. Neff	14912930
ACA1_324820	CDS	ACA1_324820	NW_004457300.1	31926	32558	D	encoded by transcript ACA1_324820A; uncharacterized protein	31926..32558	Acanthamoeba castellanii str. Neff	14912931
ACA1_324830	CDS	ACA1_324830	NW_004457300.1	33042	34036	D	encoded by transcript ACA1_324830A; mRNA capping enzyme, catalytic domain containing protein	join(33042..33515,33617..34036)	Acanthamoeba castellanii str. Neff	14912932
ACA1_324840	CDS	ACA1_324840	NW_004457300.1	34571	35446	R	encoded by transcript ACA1_324840A; uncharacterized protein	complement(34571..35446)	Acanthamoeba castellanii str. Neff	14912933
ACA1_324850	CDS	ACA1_324850	NW_004457300.1	36268	37440	R	encoded by transcript ACA1_324850A; uncharacterized protein	complement(36268..37440)	Acanthamoeba castellanii str. Neff	14912955
ACA1_324860	CDS	ACA1_324860	NW_004457300.1	37663	39067	D	encoded by transcript ACA1_324860A; uncharacterized protein	join(37663..38708,38812..38941,39038..39067)	Acanthamoeba castellanii str. Neff	14912956
ACA1_324870	CDS	ACA1_324870	NW_004457300.1	39241	40484	R	encoded by transcript ACA1_324870A; uncharacterized protein	complement(join(39241..40137,40179..40257,40333..40484))	Acanthamoeba castellanii str. Neff	14912957
ACA1_324880	CDS	ACA1_324880	NW_004457300.1	41064	41816	R	encoded by transcript ACA1_324880A; uncharacterized protein	complement(41064..41816)	Acanthamoeba castellanii str. Neff	14912958
ACA1_324890	CDS	ACA1_324890	NW_004457300.1	43942	45111	D	encoded by transcript ACA1_324890A; uncharacterized protein	43942..45111	Acanthamoeba castellanii str. Neff	14912934
ACA1_324900	CDS	ACA1_324900	NW_004457300.1	45231	45797	D	encoded by transcript ACA1_324900A; uncharacterized protein	45231..45797	Acanthamoeba castellanii str. Neff	14912935
ACA1_324910	CDS	ACA1_324910	NW_004457300.1	46263	46982	R	encoded by transcript ACA1_324910A; uncharacterized protein	complement(46263..46982)	Acanthamoeba castellanii str. Neff	14912936
ACA1_324920	CDS	ACA1_324920	NW_004457300.1	47685	49490	R	encoded by transcript ACA1_324920A; uncharacterized protein	complement(47685..49490)	Acanthamoeba castellanii str. Neff	14912937
ACA1_324930	CDS	ACA1_324930	NW_004457300.1	50034	50674	R	encoded by transcript ACA1_324930A; Hypothetical protein	complement(join(50034..50531,50585..50674))	Acanthamoeba castellanii str. Neff	14912941
ACA1_324940	CDS	ACA1_324940	NW_004457300.1	50770	52941	D	encoded by transcript ACA1_324940A; uncharacterized protein	50770..52941	Acanthamoeba castellanii str. Neff	14912942
ACA1_324950	CDS	ACA1_324950	NW_004457300.1	53725	55051	R	encoded by transcript ACA1_324950A; uncharacterized protein	complement(join(53725..53783,53820..53894,54032..54183,54318..54502,54674..55051))	Acanthamoeba castellanii str. Neff	14912943
ACA1_324960	CDS	ACA1_324960	NW_004457300.1	56127	56747	R	encoded by transcript ACA1_324960A; alkylated dna repair protein, putative	complement(56127..56747)	Acanthamoeba castellanii str. Neff	14912951
ACA1_324970	CDS	ACA1_324970	NW_004457300.1	57092	57862	D	encoded by transcript ACA1_324970A; uncharacterized protein	join(57092..57274,57290..57862)	Acanthamoeba castellanii str. Neff	14912952
ACA1_324980	CDS	ACA1_324980	NW_004457300.1	58167	60698	R	encoded by transcript ACA1_324980A; uncharacterized protein	complement(join(58167..58226,58307..58568,58695..58915,59397..59711,59970..60698))	Acanthamoeba castellanii str. Neff	14912953
ACA1_324990	CDS	ACA1_324990	NW_004457300.1	61468	61923	D	encoded by transcript ACA1_324990A; uncharacterized protein	61468..61923	Acanthamoeba castellanii str. Neff	14912954
ACA1_325000	CDS	ACA1_325000	NW_004457300.1	64258	65728	D	encoded by transcript ACA1_325000A; C5 cytosine-specific DNA methylase superfamily protein	join(64258..64638,64661..65728)	Acanthamoeba castellanii str. Neff	14912928
ACA1_011910	CDS	ACA1_011910	NW_004457299.1	1094	1588	R	encoded by transcript ACA1_011910A; uncharacterized protein	complement(1094..1588)	Acanthamoeba castellanii str. Neff	14912924
ACA1_012020	CDS	ACA1_012020	NW_004457299.1	2731	6132	R	encoded by transcript ACA1_012020A; uncharacterized protein	complement(join(2731..3336,3400..3504,3612..3751,3839..4009,4205..4352,4456..4590,4684..4818,4912..5181,5291..5417,5546..5780,5919..6132))	Acanthamoeba castellanii str. Neff	14912923
ACA1_012030	CDS	ACA1_012030	NW_004457299.1	6210	8044	D	encoded by transcript ACA1_012030A; uncharacterized protein	join(6210..6666,6818..6962,7259..7391,7499..8044)	Acanthamoeba castellanii str. Neff	14912926
ACA1_012040	CDS	ACA1_012040	NW_004457299.1	8143	10318	D	encoded by transcript ACA1_012040A; LIM domain containing protein	join(8143..8302,8419..8501,8689..8731,8919..9146,9266..9387,9540..9728,9892..10045,10197..10318)	Acanthamoeba castellanii str. Neff	14912927
ACA1_012050	CDS	ACA1_012050	NW_004457299.1	10508	13537	D	encoded by transcript ACA1_012050A; helicase, putative	join(10508..10738,10816..11529,11702..12064,13451..13537)	Acanthamoeba castellanii str. Neff	14912925
ACA1_023990	CDS	ACA1_023990	NW_004457298.1	19	507	R	encoded by transcript ACA1_023990A; uncharacterized protein	complement(<19..507)	Acanthamoeba castellanii str. Neff	14912919
ACA1_024000	CDS	ACA1_024000	NW_004457298.1	1096	2130	D	encoded by transcript ACA1_024000A; uncharacterized protein	join(1096..1125,1193..1342,1421..1464,1560..2130)	Acanthamoeba castellanii str. Neff	14912920
ACA1_024010	CDS	ACA1_024010	NW_004457298.1	2220	4096	R	encoded by transcript ACA1_024010A; RGP1 retrograde golgi transport protein, putative	complement(join(2220..2446,2548..2677,2699..2776,2849..2976,3056..3207,3308..3359,3422..3550,3665..3814,3831..3851,3884..3967,4045..4096))	Acanthamoeba castellanii str. Neff	14912922
ACA1_024020	CDS	ACA1_024020	NW_004457298.1	4556	7930	R	encoded by transcript ACA1_024020A; RhoGAP domain containing protein	complement(join(4556..5460,5533..5560,5644..5771,5843..5901,5984..6050,6124..6202,6283..6389,6475..6603,6742..6804,6905..7010,7119..7262,7343..7426,7494..7598,7671..7763,7835..7930))	Acanthamoeba castellanii str. Neff	14912921
ACA1_024030	CDS	ACA1_024030	NW_004457298.1	8638	11758	D	encoded by transcript ACA1_024030A; uncharacterized protein	join(8638..8793,8869..8971,9008..9078,9154..9261,9335..9440,9552..10131,10207..10630,10714..10824,10896..11317,11408..11518,11593..11758)	Acanthamoeba castellanii str. Neff	14912916
ACA1_024040	CDS	ACA1_024040	NW_004457298.1	11898	16695	R	encoded by transcript ACA1_024040A; WD domain, G-beta repeat-containing protein	complement(join(11898..12691,12813..12875,12973..13106,13201..13312,13435..13528,13661..13711,13797..13938,14015..14097,14174..14248,14374..14636,14713..14829,14949..14994,15071..15364,15449..15597,15674..15786,15920..16200,16300..16353,16684..16695))	Acanthamoeba castellanii str. Neff	14912918
ACA1_024050	CDS	ACA1_024050	NW_004457298.1	17885	20729	D	encoded by transcript ACA1_024050A; Zn fingercontaining protein	join(17885..17965,18035..18100,18190..18351,18458..18538,18624..18828,18920..18992,19069..19113,19313..19407,19506..19737,19783..19958,20039..20504,20642..20729)	Acanthamoeba castellanii str. Neff	14912917
ACA1_372330	CDS	ACA1_372330	NW_004457297.1	119	1024	R	encoded by transcript ACA1_372330A; uncharacterized protein	complement(join(119..241,730..786,857..1024))	Acanthamoeba castellanii str. Neff	14912869
ACA1_372340	CDS	ACA1_372340	NW_004457297.1	1688	2193	R	encoded by transcript ACA1_372340A; uncharacterized protein	complement(join(1688..1840,1892..1942,2098..2193))	Acanthamoeba castellanii str. Neff	14912805
ACA1_372450	CDS	ACA1_372450	NW_004457297.1	4289	5918	R	encoded by transcript ACA1_372450A; uncharacterized protein	complement(join(4289..4446,4620..4752,4857..4927,5044..5117,5253..5530,5591..5775,5891..5918))	Acanthamoeba castellanii str. Neff	14912894
ACA1_372560	CDS	ACA1_372560	NW_004457297.1	8599	9271	D	encoded by transcript ACA1_372560A; chromate reductase	join(8599..8989,9051..9271)	Acanthamoeba castellanii str. Neff	14912759
ACA1_372570	CDS	ACA1_372570	NW_004457297.1	9572	13686	D	encoded by transcript ACA1_372570A; uncharacterized protein	join(9572..10314,10457..10562,10668..10802,10930..10984,11117..11229,11249..11296,11529..11617,11800..11913,12333..12504,12711..12830,12956..13096,13183..13418,13482..13686)	Acanthamoeba castellanii str. Neff	14912886
ACA1_372580	CDS	ACA1_372580	NW_004457297.1	15388	17505	R	encoded by transcript ACA1_372580A; lipase A precursor family protein	complement(join(15388..15512,15600..15653,15739..15881,15980..16039,16107..16187,16266..16396,16474..16554,16632..16728,16796..16889,16948..17056,17226..17300,17392..17505))	Acanthamoeba castellanii str. Neff	14912887
ACA1_372590	CDS	ACA1_372590	NW_004457297.1	17907	21686	D	encoded by transcript ACA1_372590A; uncharacterized protein	17907..21686	Acanthamoeba castellanii str. Neff	14912851
ACA1_372600	CDS	ACA1_372600	NW_004457297.1	21793	24992	R	encoded by transcript ACA1_372600A; Fbox domain containing protein	complement(join(21793..21958,22063..22144,22238..22388,22454..22570,22663..22797,22899..23022,23187..23249,23332..23425,23511..23596,23678..23851,23951..23985,24013..24075,24170..24410,24544..24992))	Acanthamoeba castellanii str. Neff	14912802
ACA1_372610	CDS	ACA1_372610	NW_004457297.1	25290	26523	R	encoded by transcript ACA1_372610A; betahydroxylase	complement(join(25290..25349,25430..25507,25605..25743,25880..25970,26072..26211,26321..26523))	Acanthamoeba castellanii str. Neff	14912835
ACA1_372620	CDS	ACA1_372620	NW_004457297.1	26955	28010	R	encoded by transcript ACA1_372620A; WH2 motif domain containing protein	complement(26955..28010)	Acanthamoeba castellanii str. Neff	14912836
ACA1_372630	CDS	ACA1_372630	NW_004457297.1	28431	35712	R	encoded by transcript ACA1_372630A; kinesin motor domain containing protein	complement(join(28431..29012,29093..29774,29848..29946,30043..30203,30318..30478,30555..30723,30804..31031,31141..31402,31521..31702,31789..31911,31987..32166,32254..32640,32729..32841,32902..32983,33079..33329,33418..33655,33786..33869,33966..34143,34249..34385,34484..34564,34663..34812,34935..35048,35136..35344,35433..35529,35665..35712))	Acanthamoeba castellanii str. Neff	14912901
ACA1_372640	CDS	ACA1_372640	NW_004457297.1	36101	36798	D	encoded by transcript ACA1_372640A; uncharacterized protein	join(36101..36148,36172..36233,36343..36426,36493..36598,36712..36798)	Acanthamoeba castellanii str. Neff	14912902
ACA1_372650	CDS	ACA1_372650	NW_004457297.1	37340	39685	D	encoded by transcript ACA1_372650A; betalactamase	join(37340..37470,37539..37653,37719..37801,37891..38002,38078..38207,38302..38399,38504..38677,38705..38846,38928..39087,39138..39471,39668..39685)	Acanthamoeba castellanii str. Neff	14912824
ACA1_372660	CDS	ACA1_372660	NW_004457297.1	39656	41535	R	encoded by transcript ACA1_372660A; uncharacterized protein	complement(join(39656..39894,39986..40104,40258..40340,40414..40513,40595..41225,41300..41403,41492..41535))	Acanthamoeba castellanii str. Neff	14912825
ACA1_372680	CDS	ACA1_372680	NW_004457297.1	54040	57437	D	encoded by transcript ACA1_372680A; uncharacterized protein	join(54040..54069,54175..54269,54365..54470,54552..54593,54789..55273,55404..55587,55678..55853,55953..56069,56146..56814,56968..57117,57197..57437)	Acanthamoeba castellanii str. Neff	14912831
ACA1_372690	CDS	ACA1_372690	NW_004457297.1	58223	58855	D	encoded by transcript ACA1_372690A; uncharacterized protein	58223..58855	Acanthamoeba castellanii str. Neff	14912832
ACA1_372700	CDS	ACA1_372700	NW_004457297.1	58984	59603	R	encoded by transcript ACA1_372700A; uncharacterized protein	complement(join(58984..59067,59151..59251,59330..59417,59511..59603))	Acanthamoeba castellanii str. Neff	14912878
ACA1_372720	CDS	ACA1_372720	NW_004457297.1	61886	64278	D	encoded by transcript ACA1_372720A; obtusifoliol 14alphademethylase, putative	join(61886..61996,62142..62252,62418..62504,62609..62815,62909..63090,63171..63328,63411..63538,63625..63790,63877..64146,64238..64278)	Acanthamoeba castellanii str. Neff	14912880
ACA1_372730	CDS	ACA1_372730	NW_004457297.1	64592	65454	D	encoded by transcript ACA1_372730A; uncharacterized protein	join(64592..64925,65002..65123,65260..65454)	Acanthamoeba castellanii str. Neff	14912881
ACA1_372740	CDS	ACA1_372740	NW_004457297.1	65969	75387	D	encoded by transcript ACA1_372740A; leucine rich repeat domain containing protein	join(65969..65998,66150..66273,66454..66753,66825..67096,67206..67390,67489..67685,67771..68142,68230..68519,68594..68653,68730..68802,68885..68965,69032..69163,69242..69382,69459..69533,69616..70041,70117..70516,70602..70985,71067..71192,71266..71378,71451..71561,71632..71737,71814..71921,71999..72050,72207..72419,72490..72572,72684..72970,73062..73114,73207..73314,73452..73584,73701..73835,73920..74091,74213..74379,74448..74541,74651..74736,75180..75267,75354..75387)	Acanthamoeba castellanii str. Neff	14912899
ACA1_372850	CDS	ACA1_372850	NW_004457297.1	75730	78432	D	encoded by transcript ACA1_372850A; mitogen-activated protein kinase kinase kinase	join(75730..75958,76564..76706,76796..76883,76972..77149,77224..77722,77735..77896,77962..78432)	Acanthamoeba castellanii str. Neff	14912900
ACA1_373060	CDS	ACA1_373060	NW_004457297.1	80098	81441	R	encoded by transcript ACA1_373060A; K+ channel tetramerization subfamily protein	complement(join(80098..80340,80624..81016,81103..81441))	Acanthamoeba castellanii str. Neff	14912852
ACA1_373170	CDS	ACA1_373170	NW_004457297.1	82247	82622	R	encoded by transcript ACA1_373170A; uncharacterized protein	complement(join(82247..82303,82360..82533,82602..82622))	Acanthamoeba castellanii str. Neff	14912853
ACA1_373280	CDS	ACA1_373280	NW_004457297.1	84732	85657	R	encoded by transcript ACA1_373280A; von Willebrand factor type A domain containing protein	complement(join(84732..85061,85229..85475,85605..85657))	Acanthamoeba castellanii str. Neff	14912854
ACA1_373390	CDS	ACA1_373390	NW_004457297.1	86421	87041	D	encoded by transcript ACA1_373390A; uncharacterized protein	join(86421..86442,86467..86525,86661..87041)	Acanthamoeba castellanii str. Neff	14912859
ACA1_373400	CDS	ACA1_373400	NW_004457297.1	88743	89422	R	encoded by transcript ACA1_373400A; uncharacterized protein	complement(join(88743..88976,89083..89207,89323..89422))	Acanthamoeba castellanii str. Neff	14912860
ACA1_373430	CDS	ACA1_373430	NW_004457297.1	92997	95493	R	encoded by transcript ACA1_373430A; WD domain, G-beta repeat-containing protein	complement(join(92997..93149,93323..93387,93481..93535,93925..93992,94081..94227,94336..94440,94529..94619,94713..94853,94947..95009,95108..95330,95450..95493))	Acanthamoeba castellanii str. Neff	14912818
ACA1_373540	CDS	ACA1_373540	NW_004457297.1	95905	96922	R	encoded by transcript ACA1_373540A; uncharacterized protein	complement(join(95905..96177,96302..96518,96834..96922))	Acanthamoeba castellanii str. Neff	14912819
ACA1_373550	CDS	ACA1_373550	NW_004457297.1	97237	98670	R	encoded by transcript ACA1_373550A; CBS domain containing protein	complement(join(97237..97348,97457..97640,97724..97871,97907..98011,98080..98171,98286..98670))	Acanthamoeba castellanii str. Neff	14912820
ACA1_373560	CDS	ACA1_373560	NW_004457297.1	98891	100569	R	encoded by transcript ACA1_373560A; uncharacterized protein	complement(join(98891..98998,99076..99170,99271..99416,99503..99562,99711..99862,99973..100067,100185..100316,100470..100569))	Acanthamoeba castellanii str. Neff	14912867
ACA1_373570	CDS	ACA1_373570	NW_004457297.1	101168	104791	R	encoded by transcript ACA1_373570A; uncharacterized protein	complement(join(101168..102829,102931..103146,103220..103425,103507..103657,103747..103841,103912..104791))	Acanthamoeba castellanii str. Neff	14912868
ACA1_373590	CDS	ACA1_373590	NW_004457297.1	108667	110156	R	encoded by transcript ACA1_373590A; uncharacterized protein	complement(join(108667..109250,109351..109405,109489..109610,109716..109903,110026..>110156))	Acanthamoeba castellanii str. Neff	14912814
ACA1_373600	CDS	ACA1_373600	NW_004457297.1	110761	113147	R	encoded by transcript ACA1_373600A; uncharacterized protein	complement(join(110761..110846,110931..111024,111106..111195,111312..111497,111592..111690,111785..111906,112002..112098,112261..112310,112387..112435,112542..112582,112697..112814,112878..112945,113021..113147))	Acanthamoeba castellanii str. Neff	14912815
ACA1_373610	CDS	ACA1_373610	NW_004457297.1	113514	115175	R	encoded by transcript ACA1_373610A; uncharacterized protein	complement(join(113514..114110,114224..114501,114592..114671,114746..114855,114959..115100,115112..115142,115169..115175))	Acanthamoeba castellanii str. Neff	14912816
ACA1_373620	CDS	ACA1_373620	NW_004457297.1	115725	116367	R	encoded by transcript ACA1_373620A; amino acidbinding ACT domain containing protein	complement(join(115725..115977,116162..116367))	Acanthamoeba castellanii str. Neff	14912895
ACA1_373630	CDS	ACA1_373630	NW_004457297.1	116994	118776	R	encoded by transcript ACA1_373630A; RNA recognition motif domain containing protein	complement(join(116994..117170,117265..117393,117494..117793,117817..117869,117951..118161,118232..118283,118414..118590,118670..118776))	Acanthamoeba castellanii str. Neff	14912896
ACA1_373640	CDS	ACA1_373640	NW_004457297.1	118836	120359	D	encoded by transcript ACA1_373640A; uncharacterized protein	join(118836..119625,119650..119724,119748..119801,119819..119961,120078..120359)	Acanthamoeba castellanii str. Neff	14912865
ACA1_373650	CDS	ACA1_373650	NW_004457297.1	120574	128582	R	encoded by transcript ACA1_373650A; RapGAP/RanGAP domain containing protein, putative	complement(join(120574..120632,120747..120996,121068..121226,121313..121474,121637..121739,121843..121977,122033..122230,122322..122396,122478..122564,122695..122854,122934..123074,123191..123320,123429..123608,123715..123851,123957..124050,124135..124279,124377..124504,124619..124747,124840..124962,125063..125180,125324..125436,125550..125620,125740..125813,125890..126230,126311..126574,126658..126714,126837..126937,127263..127366,127456..127694,127806..127918,128005..128112,128261..128368,128477..128582))	Acanthamoeba castellanii str. Neff	14912866
ACA1_373660	CDS	ACA1_373660	NW_004457297.1	130981	134273	D	encoded by transcript ACA1_373660A; spindle-associated protein	join(130981..131055,131128..131235,131301..131402,131476..131618,131692..131791,131868..131954,132034..132123,132194..132358,132434..132607,132687..132809,132852..134273)	Acanthamoeba castellanii str. Neff	14912760
ACA1_373670	CDS	ACA1_373670	NW_004457297.1	134648	138706	R	encoded by transcript ACA1_373670A; cation transport domain containing protein	complement(join(134648..135074,135217..135328,135436..135615,135715..135795,135887..135965,136051..136122,136260..136395,136484..136550,136662..136786,136886..137036,137131..137264,137444..137540,137653..137789,137937..138234,138403..138706))	Acanthamoeba castellanii str. Neff	14912840
ACA1_373680	CDS	ACA1_373680	NW_004457297.1	138896	140735	D	encoded by transcript ACA1_373680A; uncharacterized protein	join(138896..138950,139035..139147,139229..139324,139397..139548,139618..139720,139782..139908,139988..140217,140280..140320,140405..140528,140610..140735)	Acanthamoeba castellanii str. Neff	14912841
ACA1_373690	CDS	ACA1_373690	NW_004457297.1	140926	143289	D	encoded by transcript ACA1_373690A; ADPribosylglycohydrolase superfamily protein	join(140926..141147,141282..141375,141438..141878,141982..142121,142211..142385,142496..142647,142726..142772,142848..142959,143023..143289)	Acanthamoeba castellanii str. Neff	14912806
ACA1_373700	CDS	ACA1_373700	NW_004457297.1	143516	149787	D	encoded by transcript ACA1_373700A; SacI domain containing protein	join(143516..143702,143805..143873,143940..144067,144182..144388,144469..144583,144666..144856,144959..145107,145194..145292,145367..145466,145573..145756,145852..146040,146138..146281,146370..146534,146634..146822,146960..147216,147287..147414,147499..147793,147858..147969,148076..148449,148541..148657,148846..148932,149002..149787)	Acanthamoeba castellanii str. Neff	14912807
ACA1_373710	CDS	ACA1_373710	NW_004457297.1	149881	150060	R	encoded by transcript ACA1_373710A; uncharacterized protein	complement(149881..150060)	Acanthamoeba castellanii str. Neff	14912890
ACA1_373720	CDS	ACA1_373720	NW_004457297.1	150442	151550	D	encoded by transcript ACA1_373720A; exonuclease	join(150442..150693,150764..150914,150998..151268,151391..151550)	Acanthamoeba castellanii str. Neff	14912808
ACA1_373730	CDS	ACA1_373730	NW_004457297.1	151711	152557	R	encoded by transcript ACA1_373730A; GTPase NRas precursor, putative	complement(join(151711..152141,152266..152364,152461..152557))	Acanthamoeba castellanii str. Neff	14912809
ACA1_373740	CDS	ACA1_373740	NW_004457297.1	153990	157677	R	encoded by transcript ACA1_373740A; uncharacterized protein	complement(join(153990..154298,154373..154594,154625..154737,154804..154954,155051..155164,155215..155237,155804..155938,156117..156157,156399..156519,156637..156722,156818..156890,157096..157377,157473..157677))	Acanthamoeba castellanii str. Neff	14912810
ACA1_373750	CDS	ACA1_373750	NW_004457297.1	157810	159676	R	encoded by transcript ACA1_373750A; uncharacterized protein	complement(join(157810..157926,157997..158099,158338..158476,158570..158708,158784..158942,159047..159219,159334..159676))	Acanthamoeba castellanii str. Neff	14912870
ACA1_373760	CDS	ACA1_373760	NW_004457297.1	159808	161213	R	encoded by transcript ACA1_373760A; bifunctional GlmU protein	complement(join(159808..159978,160063..160240,160315..160349,160416..160633,160723..160836,160886..161213))	Acanthamoeba castellanii str. Neff	14912871
ACA1_373780	CDS	ACA1_373780	NW_004457297.1	165301	165677	R	encoded by transcript ACA1_373780A; uncharacterized protein	complement(join(165301..165454,165619..165677))	Acanthamoeba castellanii str. Neff	14912914
ACA1_373790	CDS	ACA1_373790	NW_004457297.1	165820	166161	R	encoded by transcript ACA1_373790A; uncharacterized protein	complement(165820..166161)	Acanthamoeba castellanii str. Neff	14912915
ACA1_373800	CDS	ACA1_373800	NW_004457297.1	167541	167888	R	encoded by transcript ACA1_373800A; uncharacterized protein	complement(167541..167888)	Acanthamoeba castellanii str. Neff	14912882
ACA1_373820	CDS	ACA1_373820	NW_004457297.1	168936	172104	R	encoded by transcript ACA1_373820A; chromodomain helicase DNA binding protein family	complement(join(168936..169400,169643..169759,169870..169957,170102..170232,170338..170475,170611..170693,170762..170890,170972..171081,171162..171274,171755..171955,172042..172104))	Acanthamoeba castellanii str. Neff	14912884
ACA1_373830	CDS	ACA1_373830	NW_004457297.1	172279	173317	D	encoded by transcript ACA1_373830A; uncharacterized protein	join(172279..172605,172676..172873,172947..173204,173279..173317)	Acanthamoeba castellanii str. Neff	14912885
ACA1_373850	CDS	ACA1_373850	NW_004457297.1	176201	181002	R	encoded by transcript ACA1_373850A; gelsolin repeatcontaining protein	complement(join(176201..177011,177096..177348,177471..177765,177862..178018,178167..178294,178385..178559,178668..178824,178918..179068,179168..179323,179421..179498,179587..179649,179730..179841,179960..180039,180170..180723,180747..181002))	Acanthamoeba castellanii str. Neff	14912777
ACA1_373860	CDS	ACA1_373860	NW_004457297.1	181809	182735	D	encoded by transcript ACA1_373860A; Cytochrome c/c1 heme lyase	join(181809..182066,182184..182257,182384..182527,182630..182735)	Acanthamoeba castellanii str. Neff	14912778
ACA1_373870	CDS	ACA1_373870	NW_004457297.1	183049	183513	D	encoded by transcript ACA1_373870A; uncharacterized protein	183049..183513	Acanthamoeba castellanii str. Neff	14912845
ACA1_373880	CDS	ACA1_373880	NW_004457297.1	183936	184764	D	encoded by transcript ACA1_373880A; uncharacterized protein	join(183936..184073,184145..184404,184470..184764)	Acanthamoeba castellanii str. Neff	14912846
ACA1_373890	CDS	ACA1_373890	NW_004457297.1	184859	186261	R	encoded by transcript ACA1_373890A; actin related protein 2/3 complex, 41 kDa subunit	complement(join(184859..185093,185165..185672,185757..185931,186027..186112,186180..186261))	Acanthamoeba castellanii str. Neff	14912847
ACA1_373900	CDS	ACA1_373900	NW_004457297.1	186647	187759	D	encoded by transcript ACA1_373900A; methyltransferase domain containing protein	join(186647..186898,186963..187218,187257..187759)	Acanthamoeba castellanii str. Neff	14912833
ACA1_373910	CDS	ACA1_373910	NW_004457297.1	187919	190022	R	encoded by transcript ACA1_373910A; alkaline phosphatase family subfamily protein	complement(join(187919..188100,188172..188274,188359..188522,188596..188745,188851..189021,189116..189202,189301..189417,189490..189505,189537..189633,189737..189926,190013..190022))	Acanthamoeba castellanii str. Neff	14912834
ACA1_373920	CDS	ACA1_373920	NW_004457297.1	190368	191462	R	encoded by transcript ACA1_373920A; uncharacterized protein	complement(join(190368..190772,190900..191004,191073..191164,191236..191311,191394..191462))	Acanthamoeba castellanii str. Neff	14912795
ACA1_373930	CDS	ACA1_373930	NW_004457297.1	191512	192898	R	encoded by transcript ACA1_373930A; uncharacterized protein	complement(join(191512..191745,191906..191994,192115..192289,192386..192520,192587..192749,192885..192898))	Acanthamoeba castellanii str. Neff	14912796
ACA1_373940	CDS	ACA1_373940	NW_004457297.1	193212	194500	D	encoded by transcript ACA1_373940A; tetratricopeptide repeat domain containing protein	join(193212..193306,193409..193587,193666..193774,193885..193985,194072..194193,194282..194500)	Acanthamoeba castellanii str. Neff	14912797
ACA1_373950	CDS	ACA1_373950	NW_004457297.1	195316	196515	D	encoded by transcript ACA1_373950A; SPY protein	join(195316..195558,195622..196515)	Acanthamoeba castellanii str. Neff	14912857
ACA1_373960	CDS	ACA1_373960	NW_004457297.1	196768	197152	R	encoded by transcript ACA1_373960A; uncharacterized protein	complement(join(196768..196957,197031..197152))	Acanthamoeba castellanii str. Neff	14912858
ACA1_373970	CDS	ACA1_373970	NW_004457297.1	197219	198056	R	encoded by transcript ACA1_373970A; uncharacterized protein	complement(join(197219..197391,197486..197616,197678..197879,197930..198056))	Acanthamoeba castellanii str. Neff	14912784
ACA1_373980	CDS	ACA1_373980	NW_004457297.1	198385	199787	R	encoded by transcript ACA1_373980A; anchor domain containing protein	complement(join(198385..198480,198561..199051,199142..199360,199430..199787))	Acanthamoeba castellanii str. Neff	14912785
ACA1_373990	CDS	ACA1_373990	NW_004457297.1	199995	201183	D	encoded by transcript ACA1_373990A; elongation factor p (efp) kow-like subfamily protein	join(199995..200211,200274..200341,200396..200465,200531..200665,200750..200867,200931..201183)	Acanthamoeba castellanii str. Neff	14912786
ACA1_374000	CDS	ACA1_374000	NW_004457297.1	201241	203135	R	encoded by transcript ACA1_374000A; transporter, major facilitator subfamily protein	complement(join(201241..201432,201508..201548,201614..201889,201972..202068,202226..202305,202391..202552,202630..202782,202925..203135))	Acanthamoeba castellanii str. Neff	14912768
ACA1_374010	CDS	ACA1_374010	NW_004457297.1	203187	204142	R	encoded by transcript ACA1_374010A; peptidase M15D, vanX Dala-D-ala dipeptidase	complement(join(203187..203193,203324..203452,203524..203649,203728..203888,203957..204142))	Acanthamoeba castellanii str. Neff	14912769
ACA1_374020	CDS	ACA1_374020	NW_004457297.1	204499	206064	R	encoded by transcript ACA1_374020A; retroelement pol polyproteinlike, putative	complement(join(204499..205036,205106..205299,205477..205659,205699..206064))	Acanthamoeba castellanii str. Neff	14912770
ACA1_374030	CDS	ACA1_374030	NW_004457297.1	207172	207615	R	encoded by transcript ACA1_374030A; uncharacterized protein	complement(join(207172..207274,207401..207615))	Acanthamoeba castellanii str. Neff	14912757
ACA1_374040	CDS	ACA1_374040	NW_004457297.1	207646	208647	R	encoded by transcript ACA1_374040A; uncharacterized protein	complement(join(207646..207938,208107..208647))	Acanthamoeba castellanii str. Neff	14912758
ACA1_374050	CDS	ACA1_374050	NW_004457297.1	209479	209767	D	encoded by transcript ACA1_374050A; uncharacterized protein	join(209479..209502,209576..209767)	Acanthamoeba castellanii str. Neff	14912872
ACA1_374060	CDS	ACA1_374060	NW_004457297.1	210662	211877	D	encoded by transcript ACA1_374060A; Rad51l1 protein	join(210662..210753,210839..210967,211027..211108,211189..211357,211426..211490,211584..211682,211767..211877)	Acanthamoeba castellanii str. Neff	14912873
ACA1_374070	CDS	ACA1_374070	NW_004457297.1	212849	213718	R	encoded by transcript ACA1_374070A; GAF domain containing protein	complement(join(212849..212974,213048..213134,213204..213286,213391..213448,213545..213718))	Acanthamoeba castellanii str. Neff	14912874
ACA1_374080	CDS	ACA1_374080	NW_004457297.1	214013	216167	R	encoded by transcript ACA1_374080A; Peptidase family C78	complement(join(214013..214224,214330..214851,214950..215141,215248..215376,215476..215576,215668..215867,215982..216167))	Acanthamoeba castellanii str. Neff	14912905
ACA1_374090	CDS	ACA1_374090	NW_004457297.1	217667	220122	R	encoded by transcript ACA1_374090A; protein disulfideisomerase domain containing protein	complement(join(217667..217721,217800..217870,217961..218127,218207..218321,218417..218538,218618..218679,218885..219048,219124..219247,219314..219401,219470..219595,219678..219853,219944..220122))	Acanthamoeba castellanii str. Neff	14912906
ACA1_374100	CDS	ACA1_374100	NW_004457297.1	220762	223751	D	encoded by transcript ACA1_374100A; fungal Zn(2)-Cys(6) binuclear cluster domain containing protein	join(220762..220952,221080..221379,221539..221648,221802..222384,222465..222582,222686..222886,222990..223751)	Acanthamoeba castellanii str. Neff	14912907
ACA1_374110	CDS	ACA1_374110	NW_004457297.1	224256	227767	D	encoded by transcript ACA1_374110A; protein kinase domain containing protein	join(224256..224367,224437..224598,224717..224865,224982..225128,225219..225327,225413..225490,225580..225687,225769..225873,225962..226051,226143..226324,226415..226545,226645..226731,226842..226980,227067..227174,227274..227324,227448..227556,227652..227767)	Acanthamoeba castellanii str. Neff	14912774
ACA1_374120	CDS	ACA1_374120	NW_004457297.1	228296	231460	D	encoded by transcript ACA1_374120A; protein disulfideisomerase domain containing protein	join(228296..228858,228967..229068,229181..229356,229448..229535,229633..229759,229852..230009,230126..230187,230269..230355,230459..230608,230683..230810,231028..231140,231247..231307,231452..231460)	Acanthamoeba castellanii str. Neff	14912775
ACA1_374130	CDS	ACA1_374130	NW_004457297.1	231893	233356	D	encoded by transcript ACA1_374130A; uncharacterized protein	join(231893..232128,232213..233356)	Acanthamoeba castellanii str. Neff	14912781
ACA1_374140	CDS	ACA1_374140	NW_004457297.1	233627	237163	D	encoded by transcript ACA1_374140A; BRCA1 C Terminus (BRCT) domain containing protein	join(233627..233816,233921..234047,234131..234200,234325..234396,234480..234677,234746..234791,234897..234913,234978..235077,235154..235185,235261..235321,235420..236529,236618..236676,236744..236809,236913..236987,237065..237163)	Acanthamoeba castellanii str. Neff	14912888
ACA1_374150	CDS	ACA1_374150	NW_004457297.1	237299	237934	D	encoded by transcript ACA1_374150A; uncharacterized protein	237299..237934	Acanthamoeba castellanii str. Neff	14912889
ACA1_374160	CDS	ACA1_374160	NW_004457297.1	238323	239108	D	encoded by transcript ACA1_374160A; uncharacterized protein	join(238323..238395,238482..238612,238744..238795,238888..239108)	Acanthamoeba castellanii str. Neff	14912908
ACA1_374170	CDS	ACA1_374170	NW_004457297.1	240198	240927	R	encoded by transcript ACA1_374170A; uncharacterized protein	complement(join(240198..240341,240396..240534,240665..240927))	Acanthamoeba castellanii str. Neff	14912909
ACA1_374180	CDS	ACA1_374180	NW_004457297.1	241376	243760	D	encoded by transcript ACA1_374180A; RasGEF domain containing protein	join(241376..241473,241643..241833,241928..242006,242220..242617,242850..242923,242997..243089,243241..243292,243395..243512,243610..243760)	Acanthamoeba castellanii str. Neff	14912910
ACA1_374190	CDS	ACA1_374190	NW_004457297.1	244100	244926	D	encoded by transcript ACA1_374190A; Retinoblastomabinding protein 9, putative	join(244100..244368,244524..244728,244813..244926)	Acanthamoeba castellanii str. Neff	14912891
ACA1_374200	CDS	ACA1_374200	NW_004457297.1	245303	246587	D	encoded by transcript ACA1_374200A; C8 sterol isomerase	join(245303..245546,245733..245821,245917..245984,246428..246587)	Acanthamoeba castellanii str. Neff	14912892
ACA1_374210	CDS	ACA1_374210	NW_004457297.1	246707	247709	D	encoded by transcript ACA1_374210A; uncharacterized protein	join(246707..246728,246915..247099,247182..247287,247405..247533,247618..247709)	Acanthamoeba castellanii str. Neff	14912893
ACA1_374220	CDS	ACA1_374220	NW_004457297.1	247818	249949	R	encoded by transcript ACA1_374220A; uncharacterized protein	complement(join(247818..247961,248053..248132,248225..248377,248464..248538,248616..248746,248845..248900,248968..249047,249158..249529,249601..249949))	Acanthamoeba castellanii str. Neff	14912782
ACA1_374230	CDS	ACA1_374230	NW_004457297.1	250198	250927	D	encoded by transcript ACA1_374230A; uncharacterized protein	join(250198..250348,250435..250540,250633..250764,250840..250927)	Acanthamoeba castellanii str. Neff	14912783
ACA1_374240	CDS	ACA1_374240	NW_004457297.1	251045	254248	D	encoded by transcript ACA1_374240A; leucine rich repeat domain containing protein	join(251045..251069,251167..251283,251357..251453,251542..251612,251939..252093,252170..252216,252324..252424,252531..253081,253195..253482,253577..254248)	Acanthamoeba castellanii str. Neff	14912903
ACA1_374250	CDS	ACA1_374250	NW_004457297.1	254312	255778	R	encoded by transcript ACA1_374250A; 2dehydropantoate 2-reductase	complement(join(254312..254477,254575..254746,254840..255010,255076..255130,255194..255319,255454..255503,255574..255778))	Acanthamoeba castellanii str. Neff	14912904
ACA1_374260	CDS	ACA1_374260	NW_004457297.1	255950	257921	D	encoded by transcript ACA1_374260A; topoisomerase Spo11, putative	join(255950..255966,256173..256381,256431..256497,256576..256684,256738..256824,257252..257392,257463..257509,257583..257717,257795..257921)	Acanthamoeba castellanii str. Neff	14912875
ACA1_374280	CDS	ACA1_374280	NW_004457297.1	267763	268414	D	encoded by transcript ACA1_374280A; Ras subfamily protein	join(267763..267913,267954..268032,268045..268414)	Acanthamoeba castellanii str. Neff	14912877
ACA1_374290	CDS	ACA1_374290	NW_004457297.1	268488	270615	R	encoded by transcript ACA1_374290A; carrier superfamily protein	complement(join(268488..268591,268880..269007,269137..269195,269311..269384,269477..269566,269753..269877,270020..270197,270279..270359,270501..270615))	Acanthamoeba castellanii str. Neff	14912842
ACA1_374300	CDS	ACA1_374300	NW_004457297.1	270840	271733	R	encoded by transcript ACA1_374300A; uncharacterized protein	complement(270840..271733)	Acanthamoeba castellanii str. Neff	14912843
ACA1_374310	CDS	ACA1_374310	NW_004457297.1	271923	272927	R	encoded by transcript ACA1_374310A; uncharacterized protein	complement(join(271923..272086,272180..272386,272463..272675,272801..272927))	Acanthamoeba castellanii str. Neff	14912844
ACA1_374320	CDS	ACA1_374320	NW_004457297.1	273203	274567	R	encoded by transcript ACA1_374320A; UBA/TSN domain containing protein	complement(join(273203..273556,273662..273783,273956..274050,274208..274341,274355..274567))	Acanthamoeba castellanii str. Neff	14912862
ACA1_374330	CDS	ACA1_374330	NW_004457297.1	275075	279384	R	encoded by transcript ACA1_374330A; SAP domain containing protein	complement(join(275075..275944,276061..276187,276200..276247,276334..276473,276583..276852,276930..277366,277482..277938,278024..279228,279363..279384))	Acanthamoeba castellanii str. Neff	14912863
ACA1_374340	CDS	ACA1_374340	NW_004457297.1	280138	281807	D	encoded by transcript ACA1_374340A; uncharacterized protein	join(280138..280851,280926..281807)	Acanthamoeba castellanii str. Neff	14912864
ACA1_374350	CDS	ACA1_374350	NW_004457297.1	281913	283701	D	encoded by transcript ACA1_374350A; uncharacterized protein	join(281913..282017,282103..282853,282947..283198,283310..283701)	Acanthamoeba castellanii str. Neff	14912811
ACA1_374360	CDS	ACA1_374360	NW_004457297.1	284188	284943	D	encoded by transcript ACA1_374360A; uncharacterized protein	284188..284943	Acanthamoeba castellanii str. Neff	14912812
ACA1_374370	CDS	ACA1_374370	NW_004457297.1	286536	286913	R	encoded by transcript ACA1_374370A; uncharacterized protein	complement(join(286536..286577,286662..286913))	Acanthamoeba castellanii str. Neff	14912826
ACA1_374380	CDS	ACA1_374380	NW_004457297.1	287247	289214	R	encoded by transcript ACA1_374380A; heat shock protein ssa1, putative	complement(join(287247..287344,287368..287378,287401..287927,287982..289214))	Acanthamoeba castellanii str. Neff	14912827
ACA1_374390	CDS	ACA1_374390	NW_004457297.1	290437	291413	D	encoded by transcript ACA1_374390A; uncharacterized protein	join(290437..290630,290866..290927,291292..291413)	Acanthamoeba castellanii str. Neff	14912828
ACA1_374400	CDS	ACA1_374400	NW_004457297.1	291517	292376	R	encoded by transcript ACA1_374400A; uncharacterized protein	complement(join(291517..291622,291710..292137,292293..292376))	Acanthamoeba castellanii str. Neff	14912829
ACA1_374410	CDS	ACA1_374410	NW_004457297.1	292613	295303	R	encoded by transcript ACA1_374410A; transporter, major facilitator subfamily protein	complement(join(292613..292926,293001..293225,293321..293520,293621..293891,293998..294088,294179..294252,294385..294594,294690..295037,295249..295303))	Acanthamoeba castellanii str. Neff	14912911
ACA1_374420	CDS	ACA1_374420	NW_004457297.1	295357	295794	R	encoded by transcript ACA1_374420A; uncharacterized protein	complement(join(295357..295551,295618..295794))	Acanthamoeba castellanii str. Neff	14912912
ACA1_374430	CDS	ACA1_374430	NW_004457297.1	296355	298005	R	encoded by transcript ACA1_374430A; cyclin, Nterminal domain containing protein	complement(join(296355..296537,296633..297289,297400..298005))	Acanthamoeba castellanii str. Neff	14912848
ACA1_374440	CDS	ACA1_374440	NW_004457297.1	298595	300992	D	encoded by transcript ACA1_374440A; cytochrome c oxidase assembly protein cox15, putative	join(298595..298812,299034..299167,299241..299371,299438..299532,299613..299799,299870..300077,300157..300240,300324..300415,300490..300603,300709..300834,300924..300992)	Acanthamoeba castellanii str. Neff	14912849
ACA1_374450	CDS	ACA1_374450	NW_004457297.1	301995	303455	D	encoded by transcript ACA1_374450A; uncharacterized protein	join(301995..302456,302589..303455)	Acanthamoeba castellanii str. Neff	14912850
ACA1_374460	CDS	ACA1_374460	NW_004457297.1	303663	305821	D	encoded by transcript ACA1_374460A; cytochrome p450 superfamily protein	join(303663..303887,304101..304234,304391..304484,304564..304656,304725..305059,305165..305296,305389..305479,305597..305821)	Acanthamoeba castellanii str. Neff	14912855
ACA1_374470	CDS	ACA1_374470	NW_004457297.1	305965	306530	R	encoded by transcript ACA1_374470A; esterase/lipase/thioesterase family protein	complement(join(305965..306358,306445..306530))	Acanthamoeba castellanii str. Neff	14912856
ACA1_374480	CDS	ACA1_374480	NW_004457297.1	307635	310569	D	encoded by transcript ACA1_374480A; uncharacterized protein	join(307635..307711,307784..307873,307972..308103,308413..308490,308617..309567,309580..309899,309988..310367,310453..310569)	Acanthamoeba castellanii str. Neff	14912821
ACA1_374490	CDS	ACA1_374490	NW_004457297.1	310773	311158	D	encoded by transcript ACA1_374490A; uncharacterized protein	join(310773..310899,311007..311158)	Acanthamoeba castellanii str. Neff	14912822
ACA1_374500	CDS	ACA1_374500	NW_004457297.1	311730	312609	D	encoded by transcript ACA1_374500A; uncharacterized protein	join(311730..311878,311895..312609)	Acanthamoeba castellanii str. Neff	14912823
ACA1_374510	CDS	ACA1_374510	NW_004457297.1	313073	313379	D	encoded by transcript ACA1_374510A; uncharacterized protein	join(313073..313099,313203..313379)	Acanthamoeba castellanii str. Neff	14912763
ACA1_374520	CDS	ACA1_374520	NW_004457297.1	313790	314122	R	encoded by transcript ACA1_374520A; protein translation factor, putative	complement(313790..314122)	Acanthamoeba castellanii str. Neff	14912764
ACA1_374530	CDS	ACA1_374530	NW_004457297.1	314545	316750	R	encoded by transcript ACA1_374530A; kelch repeat-containing protein	complement(join(314545..314579,314653..314914,314982..315082,315168..315329,315430..315530,315603..315748,315825..315907,316058..316365,316431..316497,316576..316750))	Acanthamoeba castellanii str. Neff	14912765
ACA1_374540	CDS	ACA1_374540	NW_004457297.1	316914	318540	R	encoded by transcript ACA1_374540A; uncharacterized protein	complement(join(316914..317312,317338..317436,317580..317754,317861..318221,318294..318540))	Acanthamoeba castellanii str. Neff	14912791
ACA1_374550	CDS	ACA1_374550	NW_004457297.1	318684	321165	D	encoded by transcript ACA1_374550A; BTB/POZ domain containing protein	join(318684..318998,319135..319240,319343..319486,319565..319727,319800..319930,320042..320176,320254..320358,320455..320581,320695..320808,320891..320974,321063..321165)	Acanthamoeba castellanii str. Neff	14912792
ACA1_374560	CDS	ACA1_374560	NW_004457297.1	322133	322623	D	encoded by transcript ACA1_374560A; uncharacterized protein	join(322133..322448,322472..322623)	Acanthamoeba castellanii str. Neff	14912793
ACA1_374570	CDS	ACA1_374570	NW_004457297.1	323567	328393	D	encoded by transcript ACA1_374570A; PH domain containing protein	join(323567..323662,323785..323924,324026..325085,325160..325249,325339..325426,325507..325667,325707..325795,325876..325996,326064..326154,326226..326351,326490..326634,326689..327355,327492..327588,327685..327796,327878..328034,328187..328393)	Acanthamoeba castellanii str. Neff	14912766
ACA1_374580	CDS	ACA1_374580	NW_004457297.1	328481	330554	D	encoded by transcript ACA1_374580A; cupin domain containing protein	join(328481..328616,328686..329144,329224..329334,329409..329492,329594..329742,329829..329981,330059..330151,330255..330374,330465..330554)	Acanthamoeba castellanii str. Neff	14912767
ACA1_374590	CDS	ACA1_374590	NW_004457297.1	330632	332884	D	encoded by transcript ACA1_374590A; kelch repeat-containing protein	join(330632..330839,330942..331008,331082..331177,331277..331380,331495..331619,331693..331838,331919..332019,332145..332312,332386..332435,332642..332884)	Acanthamoeba castellanii str. Neff	14912761
ACA1_374600	CDS	ACA1_374600	NW_004457297.1	333371	336229	D	encoded by transcript ACA1_374600A; DEAD/DEAH box helicase domain containing protein	join(333371..333559,333654..333693,333914..334021,334114..334953,335235..336229)	Acanthamoeba castellanii str. Neff	14912762
ACA1_374620	CDS	ACA1_374620	NW_004457297.1	339202	342773	D	encoded by transcript ACA1_374620A; leucine rich repeat domain containing protein	join(<339202..339299,339421..339506,339582..339986,340166..340465,340543..340596,340743..340871,340961..341176,341276..341410,341518..341630,341698..341849,341976..342084,342173..342275,342356..342515,342617..342773)	Acanthamoeba castellanii str. Neff	14912838
ACA1_374630	CDS	ACA1_374630	NW_004457297.1	342907	344125	R	encoded by transcript ACA1_374630A; hydrolase, TatD family protein	complement(join(342907..343033,343105..343211,343305..343435,343517..343715,343806..343970,344066..344125))	Acanthamoeba castellanii str. Neff	14912839
ACA1_374640	CDS	ACA1_374640	NW_004457297.1	344557	346792	D	encoded by transcript ACA1_374640A; glycerone kinase	join(344557..344680,344779..344802,344835..344986,345112..345370,345460..345572,345652..345776,345871..346455,346600..346792)	Acanthamoeba castellanii str. Neff	14912800
ACA1_374650	CDS	ACA1_374650	NW_004457297.1	346973	353874	D	encoded by transcript ACA1_374650A; PH domain containing protein	join(346973..346999,347210..347369,347519..347580,347658..347729,347871..347996,348104..348292,348375..348458,348570..348692,348799..348993,349081..349165,349268..349365,349451..349572,349697..349760,349869..350061,350237..350361,350440..350515,350592..350780,350895..351047,351185..351283,351396..351473,351595..351723,351802..351921,352086..352231,352331..352431,352510..352664,352755..352803,352876..353276,353384..353496,353587..353703,353809..353874)	Acanthamoeba castellanii str. Neff	14912801
ACA1_374660	CDS	ACA1_374660	NW_004457297.1	354518	362536	D	encoded by transcript ACA1_374660A; ankyrin repeatcontaining protein	join(354518..354598,354697..354745,354852..355001,355097..355293,355375..355720,355812..355879,355957..356574,356695..356867,357030..357214,357288..357393,357473..357575,357649..357790,357872..358257,358338..358444,358547..358658,358746..359511,359644..360525,360586..360676,360757..360842,360935..361152,361245..361482,361575..361704,361793..361896,362018..362157,362270..362331,362395..362536)	Acanthamoeba castellanii str. Neff	14912794
ACA1_374670	CDS	ACA1_374670	NW_004457297.1	362606	364176	R	encoded by transcript ACA1_374670A; von Willebrand factor type A domain containing protein	complement(join(362606..362935,363079..363325,363433..363659,363793..363942,364039..364176))	Acanthamoeba castellanii str. Neff	14912787
ACA1_374680	CDS	ACA1_374680	NW_004457297.1	364940	365679	R	encoded by transcript ACA1_374680A; uncharacterized protein	complement(join(364940..365149,365482..365679))	Acanthamoeba castellanii str. Neff	14912779
ACA1_374690	CDS	ACA1_374690	NW_004457297.1	368603	370776	R	encoded by transcript ACA1_374690A; uncharacterized protein	complement(join(368603..369864,369958..370461,370551..370776))	Acanthamoeba castellanii str. Neff	14912780
ACA1_374700	CDS	ACA1_374700	NW_004457297.1	370866	371681	R	encoded by transcript ACA1_374700A; oxidoreductase domain containing protein	complement(join(370866..371035,371100..371212,371266..371681))	Acanthamoeba castellanii str. Neff	14912788
ACA1_374710	CDS	ACA1_374710	NW_004457297.1	371780	374147	D	encoded by transcript ACA1_374710A; WD domain, G-beta repeat-containing protein	join(371780..371814,371956..372101,372225..372326,372630..372778,372863..372985,373053..373092,373191..373306,373396..373518,373592..373717,373780..373876,373942..374029,374114..374147)	Acanthamoeba castellanii str. Neff	14912789
ACA1_374720	CDS	ACA1_374720	NW_004457297.1	375777	380552	D	encoded by transcript ACA1_374720A; uncharacterized protein	join(375777..376077,376170..376328,376486..376769,376879..377128,377235..377397,377493..377620,377698..377832,377930..378054,378126..378236,378298..378306,378429..378588,378699..378845,378932..379347,379462..379585,379762..379911,379999..380552)	Acanthamoeba castellanii str. Neff	14912790
ACA1_374730	CDS	ACA1_374730	NW_004457297.1	381250	382790	R	encoded by transcript ACA1_374730A; von Willebrand factor type A domain containing protein	complement(join(381250..381579,381728..381974,382100..382269,382392..382541,382653..382790))	Acanthamoeba castellanii str. Neff	14912798
ACA1_374740	CDS	ACA1_374740	NW_004457297.1	383585	385481	D	encoded by transcript ACA1_374740A; uncharacterized protein	join(383585..383888,383987..384145,384318..384598,384887..384990,385063..385223,385297..385481)	Acanthamoeba castellanii str. Neff	14912799
ACA1_374950	CDS	ACA1_374950	NW_004457297.1	388247	390239	D	encoded by transcript ACA1_374950A; uncharacterized protein	join(388247..388550,388619..388777,388955..389241,389387..389629,389736..390239)	Acanthamoeba castellanii str. Neff	14912803
ACA1_375060	CDS	ACA1_375060	NW_004457297.1	391648	392296	D	encoded by transcript ACA1_375060A; uncharacterized protein	join(391648..391676,391690..391725,391859..391976,392024..392110,392171..392296)	Acanthamoeba castellanii str. Neff	14912804
ACA1_375070	CDS	ACA1_375070	NW_004457297.1	393280	394849	D	encoded by transcript ACA1_375070A; uncharacterized protein	join(393280..393456,393735..393794,393891..393978,394059..394236,394304..394368,394515..394849)	Acanthamoeba castellanii str. Neff	14912771
ACA1_375280	CDS	ACA1_375280	NW_004457297.1	397129	399854	D	encoded by transcript ACA1_375280A; uncharacterized protein	join(397129..397184,397275..397375,397468..397869,397963..399104,399286..399508,399602..399654,399747..>399854)	Acanthamoeba castellanii str. Neff	14912772
ACA1_375490	CDS	ACA1_375490	NW_004457297.1	400672	401734	D	encoded by transcript ACA1_375490A; cytochrome P450, family 4, subfamily b, polypeptide 1, putative	join(400672..400742,400813..400978,401036..401179,401282..401398,401642..401734)	Acanthamoeba castellanii str. Neff	14912773
ACA1_375600	CDS	ACA1_375600	NW_004457297.1	404572	408723	D	encoded by transcript ACA1_375600A; ABC2 type transporter superfamily protein	join(404572..404688,404784..404833,404915..404999,405048..405148,405267..405348,407314..407797,407880..408018,408087..408417,408526..408723)	Acanthamoeba castellanii str. Neff	14912897
ACA1_375710	CDS	ACA1_375710	NW_004457297.1	409276	410039	D	encoded by transcript ACA1_375710A; uncharacterized protein	join(409276..409370,409439..410039)	Acanthamoeba castellanii str. Neff	14912898
ACA1_001510	CDS	ACA1_001510	NW_004457296.1	458	727	R	encoded by transcript ACA1_001510A; uncharacterized protein	complement(458..727)	Acanthamoeba castellanii str. Neff	14912756
ACA1_001520	CDS	ACA1_001520	NW_004457296.1	964	2127	R	encoded by transcript ACA1_001520A; ATP:cob(I)alamin adenosyltransferase	complement(join(964..1081,1187..1311,1400..1497,1591..1721,1832..1925,2052..2127))	Acanthamoeba castellanii str. Neff	14912751
ACA1_001530	CDS	ACA1_001530	NW_004457296.1	2254	5510	R	encoded by transcript ACA1_001530A; FAD linked oxidase	complement(join(2254..3006,3155..3630,3651..3684,3710..4939,5112..5255,5280..5510))	Acanthamoeba castellanii str. Neff	14912752
ACA1_001540	CDS	ACA1_001540	NW_004457296.1	5552	7610	R	encoded by transcript ACA1_001540A; FAD binding domain containing protein	complement(join(5552..6742,6806..7102,7208..7452,7550..7610))	Acanthamoeba castellanii str. Neff	14912755
ACA1_001550	CDS	ACA1_001550	NW_004457296.1	7881	8312	R	encoded by transcript ACA1_001550A; Dgalactarate dehydratase/Altronate hydrolase-like protein	complement(join(7881..8191,8273..8312))	Acanthamoeba castellanii str. Neff	14912753
ACA1_002730	CDS	ACA1_002730	NW_004457295.1	119	596	R	encoded by transcript ACA1_002730A; uncharacterized protein	complement(join(119..180,210..484,559..596))	Acanthamoeba castellanii str. Neff	14912744
ACA1_002740	CDS	ACA1_002740	NW_004457295.1	1046	3820	R	encoded by transcript ACA1_002740A; kinesin motor domain containing protein	complement(join(1046..1150,1223..1870,1941..2027,2097..2681,2766..3352,3423..3579,3653..3820))	Acanthamoeba castellanii str. Neff	14912746
ACA1_002750	CDS	ACA1_002750	NW_004457295.1	3967	5459	R	encoded by transcript ACA1_002750A; Fbox domain containing protein	complement(join(3967..4212,4285..4387,4460..4567,4631..4710,4744..4886,4975..5164,5233..5307,5394..5459))	Acanthamoeba castellanii str. Neff	14912745
ACA1_002760	CDS	ACA1_002760	NW_004457295.1	5692	6342	D	encoded by transcript ACA1_002760A; uncharacterized protein	join(5692..5713,5799..5959,6026..6092,6155..6342)	Acanthamoeba castellanii str. Neff	14912747
ACA1_002770	CDS	ACA1_002770	NW_004457295.1	6737	9086	D	encoded by transcript ACA1_002770A; Fbox domain containing protein	join(6737..7133,7204..7296,7426..7507,7598..7793,7901..8001,8087..8154,8224..8339,8428..8692,8786..8946,9024..9086)	Acanthamoeba castellanii str. Neff	14912749
ACA1_002780	CDS	ACA1_002780	NW_004457295.1	9289	10553	R	encoded by transcript ACA1_002780A; RNA recognition motif domain containing protein	complement(join(9289..9646,9733..9820,9887..9977,10057..10127,10210..10359,10445..10553))	Acanthamoeba castellanii str. Neff	14912748
ACA1_002790	CDS	ACA1_002790	NW_004457295.1	10670	12774	D	encoded by transcript ACA1_002790A; UBA/TSN domain containing protein	join(10670..10858,10960..11409,11496..11727,11798..12774)	Acanthamoeba castellanii str. Neff	14912750
ACA1_016580	CDS	ACA1_016580	NW_004457294.1	622	986	D	encoded by transcript ACA1_016580A; uncharacterized protein	join(622..691,797..937,973..986)	Acanthamoeba castellanii str. Neff	14912743
ACA1_016690	CDS	ACA1_016690	NW_004457294.1	4122	6932	R	encoded by transcript ACA1_016690A; uncharacterized protein	complement(join(4122..4326,4396..4754,5182..5742,5834..5923,5997..6092,6180..6343,6409..6467,6554..6686,6757..6838,6909..>6932))	Acanthamoeba castellanii str. Neff	14912741
ACA1_016900	CDS	ACA1_016900	NW_004457294.1	10088	10426	R	encoded by transcript ACA1_016900A; uncharacterized protein	complement(<10088..10426)	Acanthamoeba castellanii str. Neff	14912742
ACA1_026960	CDS	ACA1_026960	NW_004457293.1	25	5813	R	encoded by transcript ACA1_026960A; efflux ABC transporter, permease, putative	complement(join(<25..210,309..419,530..634,714..910,990..1137,1237..1280,1431..1497,1579..1696,1791..1880,1959..2170,2270..2380,2494..2584,2672..2772,2858..3187,3307..3441,3532..3632,3717..3876,3947..4014,4100..4235,4323..4463,4562..4613,4796..4852,4944..4996,5074..5152,5244..5386,5430..5468,5479..5648,5747..5813))	Acanthamoeba castellanii str. Neff	14912738
ACA1_026970	CDS	ACA1_026970	NW_004457293.1	6525	6908	D	encoded by transcript ACA1_026970A; uncharacterized protein	6525..6908	Acanthamoeba castellanii str. Neff	14912740
ACA1_026980	CDS	ACA1_026980	NW_004457293.1	7270	7920	D	encoded by transcript ACA1_026980A; uncharacterized protein	join(7270..7515,7602..7697,7825..7920)	Acanthamoeba castellanii str. Neff	14912733
ACA1_026990	CDS	ACA1_026990	NW_004457293.1	8080	13727	R	encoded by transcript ACA1_026990A; ABC2 type transporter superfamily protein	complement(join(8080..8313,8404..8692,8772..8910,9000..9960,10065..10262,10353..10552,10661..11014,11096..11270,11350..11532,11543..11668,11756..12062,12132..12202,12271..12512,12588..13527,13602..13727))	Acanthamoeba castellanii str. Neff	14912734
ACA1_027000	CDS	ACA1_027000	NW_004457293.1	14402	17524	R	encoded by transcript ACA1_027000A; SCP family extracellular, putative	complement(join(14402..14582,14664..14841,14930..14984,15096..15155,15317..15453,15543..16239,16360..17084,17180..17290,17476..17524))	Acanthamoeba castellanii str. Neff	14912739
ACA1_027010	CDS	ACA1_027010	NW_004457293.1	17765	19339	R	encoded by transcript ACA1_027010A; uncharacterized protein	complement(join(17765..18826,18845..19339))	Acanthamoeba castellanii str. Neff	14912732
ACA1_027020	CDS	ACA1_027020	NW_004457293.1	19884	25442	D	encoded by transcript ACA1_027020A; ABC2 type transporter, putative	join(19884..19979,20060..20360,20441..21079,21156..21480,21550..21856,21943..22068,22149..22268,22366..22894,22984..23183,23267..23464,23562..24507,24606..24744,24825..25113,25209..25442)	Acanthamoeba castellanii str. Neff	14912735
ACA1_027030	CDS	ACA1_027030	NW_004457293.1	25535	28348	R	encoded by transcript ACA1_027030A; C2 domain containing protein	complement(join(25535..25715,25842..26015,26090..26193,26270..26384,26482..26564,26657..26788,26854..26957,27122..27235,27353..27463,27547..27590,27665..27743,27841..27978,28087..28167,28279..28348))	Acanthamoeba castellanii str. Neff	14912736
ACA1_027040	CDS	ACA1_027040	NW_004457293.1	28439	31403	R	encoded by transcript ACA1_027040A; protein kinase, putative	complement(join(28439..28846,28892..29015,29101..29228,29349..29448,29529..29645,29723..29840,29918..30389,30467..30637,30721..30857,30924..30990,31062..31132,31253..31403))	Acanthamoeba castellanii str. Neff	14912731
ACA1_027050	CDS	ACA1_027050	NW_004457293.1	31859	32687	R	encoded by transcript ACA1_027050A; uncharacterized protein	complement(join(31859..31980,32065..32148,32220..32526,32634..32687))	Acanthamoeba castellanii str. Neff	14912737
ACA1_031010	CDS	ACA1_031010	NW_004457292.1	917	3220	D	encoded by transcript ACA1_031010A; RhoGAP domain containing protein	join(917..991,1280..1355,1423..1495,1624..1667,1757..1836,1926..2027,2137..2239,2355..2535,2616..2694,2843..2925,3133..3220)	Acanthamoeba castellanii str. Neff	14912720
ACA1_031020	CDS	ACA1_031020	NW_004457292.1	3721	4399	D	encoded by transcript ACA1_031020A; uncharacterized protein	join(<3721..3765,3845..4095,4210..4399)	Acanthamoeba castellanii str. Neff	14912724
ACA1_031130	CDS	ACA1_031130	NW_004457292.1	5238	5450	R	encoded by transcript ACA1_031130A; uncharacterized protein	complement(5238..5450)	Acanthamoeba castellanii str. Neff	14912725
ACA1_031140	CDS	ACA1_031140	NW_004457292.1	6769	7311	D	encoded by transcript ACA1_031140A; uncharacterized protein	join(6769..6849,6931..7311)	Acanthamoeba castellanii str. Neff	14912726
ACA1_031150	CDS	ACA1_031150	NW_004457292.1	7875	8504	D	encoded by transcript ACA1_031150A; uncharacterized protein	join(7875..7955,8289..8504)	Acanthamoeba castellanii str. Neff	14912730
ACA1_031270	CDS	ACA1_031270	NW_004457292.1	12676	14732	D	encoded by transcript ACA1_031270A; uncharacterized protein	join(12676..12924,12986..13258,13348..13438,13543..13632,13692..13798,13879..14004,14070..14199,14271..14366,14437..14732)	Acanthamoeba castellanii str. Neff	14912728
ACA1_031380	CDS	ACA1_031380	NW_004457292.1	17250	17944	R	encoded by transcript ACA1_031380A; uncharacterized protein	complement(join(17250..17365,17419..17944))	Acanthamoeba castellanii str. Neff	14912729
ACA1_031390	CDS	ACA1_031390	NW_004457292.1	18241	19593	D	encoded by transcript ACA1_031390A; uncharacterized protein	join(18241..18400,18547..18698,18796..18909,19030..19243,19343..19593)	Acanthamoeba castellanii str. Neff	14912722
ACA1_031400	CDS	ACA1_031400	NW_004457292.1	19706	20834	R	encoded by transcript ACA1_031400A; uncharacterized protein	complement(join(19706..20052,20123..20174,20285..20398,20466..20834))	Acanthamoeba castellanii str. Neff	14912723
ACA1_031410	CDS	ACA1_031410	NW_004457292.1	21120	21419	D	encoded by transcript ACA1_031410A; eukaryotic release factor 1 isoform A family protein	21120..>21419	Acanthamoeba castellanii str. Neff	14912721
ACA1_033140	CDS	ACA1_033140	NW_004457291.1	388	2015	D	encoded by transcript ACA1_033140A; rieske [2fe2s] domain containing protein	join(388..639,784..897,997..1121,1227..1422,1709..1896,1970..2015)	Acanthamoeba castellanii str. Neff	14912677
ACA1_033250	CDS	ACA1_033250	NW_004457291.1	2334	2666	R	encoded by transcript ACA1_033250A; uncharacterized protein	complement(2334..2666)	Acanthamoeba castellanii str. Neff	14912691
ACA1_033360	CDS	ACA1_033360	NW_004457291.1	2875	3496	D	encoded by transcript ACA1_033360A; uncharacterized protein	join(2875..3013,3093..3496)	Acanthamoeba castellanii str. Neff	14912678
ACA1_033370	CDS	ACA1_033370	NW_004457291.1	3627	5925	R	encoded by transcript ACA1_033370A; tetracyclineefflux transporter, putative	complement(join(3627..4232,4326..4444,4506..4604,4755..4846,4935..5029,5074..5151,5292..5483,5603..5691,5721..5925))	Acanthamoeba castellanii str. Neff	14912679
ACA1_033380	CDS	ACA1_033380	NW_004457291.1	6274	8556	D	encoded by transcript ACA1_033380A; rieske [2fe2s] domain containing protein	join(6274..6525,6647..6745,6863..6987,7124..7319,7421..7644,7756..7980,8052..8251,8378..8556)	Acanthamoeba castellanii str. Neff	14912708
ACA1_033390	CDS	ACA1_033390	NW_004457291.1	9081	10316	R	encoded by transcript ACA1_033390A; uncharacterized protein	complement(join(9081..9364,9467..9691,9804..9864,9944..10065,10139..10316))	Acanthamoeba castellanii str. Neff	14912709
ACA1_033400	CDS	ACA1_033400	NW_004457291.1	10459	13080	R	encoded by transcript ACA1_033400A; Spindle pole body protein Spc98 family protein	complement(join(10459..10601,10634..10716,10792..10941,11024..11187,11281..11418,11490..11642,11724..11882,11969..12088,12158..12271,12311..12589,12667..12839,12903..13080))	Acanthamoeba castellanii str. Neff	14912700
ACA1_033410	CDS	ACA1_033410	NW_004457291.1	13562	14271	R	encoded by transcript ACA1_033410A; uncharacterized protein	complement(join(13562..13887,13959..14006,14058..14271))	Acanthamoeba castellanii str. Neff	14912701
ACA1_033420	CDS	ACA1_033420	NW_004457291.1	14539	14988	R	encoded by transcript ACA1_033420A; oxidoreductase, short chain dehydrogenase/reductase superfamily protein	complement(join(14539..14742,14863..14988))	Acanthamoeba castellanii str. Neff	14912692
ACA1_033430	CDS	ACA1_033430	NW_004457291.1	15778	17046	D	encoded by transcript ACA1_033430A; uncharacterized protein	join(15778..15956,16068..16169,16266..16373,16468..16712,16805..17046)	Acanthamoeba castellanii str. Neff	14912693
ACA1_033440	CDS	ACA1_033440	NW_004457291.1	17209	18069	D	encoded by transcript ACA1_033440A; uncharacterized protein	17209..18069	Acanthamoeba castellanii str. Neff	14912686
ACA1_033450	CDS	ACA1_033450	NW_004457291.1	18355	20868	D	encoded by transcript ACA1_033450A; uncharacterized protein	join(18355..18953,19031..19152,19236..19325,19400..20868)	Acanthamoeba castellanii str. Neff	14912687
ACA1_033460	CDS	ACA1_033460	NW_004457291.1	20963	21265	D	encoded by transcript ACA1_033460A; uncharacterized protein	20963..21265	Acanthamoeba castellanii str. Neff	14912688
ACA1_033470	CDS	ACA1_033470	NW_004457291.1	21336	21569	R	encoded by transcript ACA1_033470A; uncharacterized protein	complement(21336..21569)	Acanthamoeba castellanii str. Neff	14912694
ACA1_033480	CDS	ACA1_033480	NW_004457291.1	21667	22809	D	encoded by transcript ACA1_033480A; uncharacterized protein	join(21667..22018,22160..22254,22319..22478,22613..22809)	Acanthamoeba castellanii str. Neff	14912695
ACA1_033490	CDS	ACA1_033490	NW_004457291.1	23379	24974	D	encoded by transcript ACA1_033490A; glycoside hydrolase family protein	23379..24974	Acanthamoeba castellanii str. Neff	14912696
ACA1_033500	CDS	ACA1_033500	NW_004457291.1	25294	30299	D	encoded by transcript ACA1_033500A; ATPase, AAA domain containing protein	join(25294..25516,25628..26072,26186..26313,26399..26556,26619..26787,26917..27310,27436..27558,27654..27763,27863..27975,28067..28156,28239..28365,28491..28646,28715..28761,28889..28997,29078..29178,29254..29294,29389..29545,29662..29743,29842..29906,30015..30110,30174..30299)	Acanthamoeba castellanii str. Neff	14912697
ACA1_033510	CDS	ACA1_033510	NW_004457291.1	30368	31329	D	encoded by transcript ACA1_033510A; AAA family ATPase	join(30368..30541,30663..30746,30855..31031,31171..31329)	Acanthamoeba castellanii str. Neff	14912702
ACA1_033520	CDS	ACA1_033520	NW_004457291.1	31763	32200	R	encoded by transcript ACA1_033520A; uncharacterized protein	complement(join(31763..31931,31995..32062,32129..32200))	Acanthamoeba castellanii str. Neff	14912674
ACA1_033530	CDS	ACA1_033530	NW_004457291.1	32531	33096	D	encoded by transcript ACA1_033530A; uncharacterized protein	join(32531..32667,32760..33096)	Acanthamoeba castellanii str. Neff	14912675
ACA1_033540	CDS	ACA1_033540	NW_004457291.1	33504	36910	D	encoded by transcript ACA1_033540A; uncharacterized protein	join(33504..34269,34396..34754,34862..35017,35114..35561,35691..36910)	Acanthamoeba castellanii str. Neff	14912676
ACA1_033550	CDS	ACA1_033550	NW_004457291.1	37087	39503	D	encoded by transcript ACA1_033550A; methionine aminopeptidase, type II, putative	join(37087..37291,37362..37451,37527..37622,37773..37905,38006..38198,38310..38549,38659..38755,38882..38988,39058..39170,39251..39503)	Acanthamoeba castellanii str. Neff	14912714
ACA1_033560	CDS	ACA1_033560	NW_004457291.1	39717	42936	R	encoded by transcript ACA1_033560A; uncharacterized protein	complement(join(39717..39738,39774..40884,40947..41415,41584..41739,41844..42202,42303..42936))	Acanthamoeba castellanii str. Neff	14912715
ACA1_033570	CDS	ACA1_033570	NW_004457291.1	43195	45581	R	encoded by transcript ACA1_033570A; methionine aminopeptidase, type II, putative	complement(join(43195..43447,43560..43672,43758..43864,43965..44301,44451..44643,44775..44907,45024..45149,45209..45298,45410..45581))	Acanthamoeba castellanii str. Neff	14912716
ACA1_033580	CDS	ACA1_033580	NW_004457291.1	45713	48000	R	encoded by transcript ACA1_033580A; uncharacterized protein	complement(join(45713..46500,46846..47464,47575..47825,47934..48000))	Acanthamoeba castellanii str. Neff	14912689
ACA1_033590	CDS	ACA1_033590	NW_004457291.1	48218	51052	R	encoded by transcript ACA1_033590A; Choline/Carnitine oacyltransferase superfamily protein	complement(join(48218..48303,48396..48497,48562..48726,48813..49010,49100..49260,49336..49506,49588..49718,49787..49926,50002..50161,50248..50384,50475..50611,50686..50824,50914..51052))	Acanthamoeba castellanii str. Neff	14912690
ACA1_033600	CDS	ACA1_033600	NW_004457291.1	52221	57375	D	encoded by transcript ACA1_033600A; uncharacterized protein	join(52221..52281,52346..52525,52587..52723,52803..52871,52954..53061,53138..53268,53637..53734,53757..53772,53832..53948,54036..54141,54216..54358,54425..54491,54575..54678,54970..55264,55328..55815,55851..56103,56206..56315,56385..56510,56582..56695,56775..57060,57202..57375)	Acanthamoeba castellanii str. Neff	14912683
ACA1_033610	CDS	ACA1_033610	NW_004457291.1	57571	61176	D	encoded by transcript ACA1_033610A; sortilin, putative	join(57571..57690,57821..57895,57986..58270,58353..58589,58671..58769,58850..58974,59115..59245,59320..59644,59714..59850,60064..60232,60295..60411,60506..60645,60733..60882,60971..61176)	Acanthamoeba castellanii str. Neff	14912684
ACA1_033620	CDS	ACA1_033620	NW_004457291.1	61424	62405	R	encoded by transcript ACA1_033620A; uncharacterized protein	complement(join(61424..61816,62232..62405))	Acanthamoeba castellanii str. Neff	14912703
ACA1_033630	CDS	ACA1_033630	NW_004457291.1	62673	63844	R	encoded by transcript ACA1_033630A; uncharacterized protein	complement(join(62673..62789,62879..62958,63038..63254,63285..63376,63535..63844))	Acanthamoeba castellanii str. Neff	14912698
ACA1_033640	CDS	ACA1_033640	NW_004457291.1	64037	66289	D	encoded by transcript ACA1_033640A; Ser/Thr phosphatase family protein	join(64037..64117,64235..64360,64476..64531,64675..64826,64906..65074,65179..65327,65482..65621,65744..65989,66122..66140,66213..66289)	Acanthamoeba castellanii str. Neff	14912699
ACA1_033650	CDS	ACA1_033650	NW_004457291.1	66569	67075	D	encoded by transcript ACA1_033650A; uncharacterized protein	join(66569..66643,66947..67075)	Acanthamoeba castellanii str. Neff	14912680
ACA1_033660	CDS	ACA1_033660	NW_004457291.1	68139	69726	D	encoded by transcript ACA1_033660A; 5'-nucleotidase, C-terminal domain containing protein	join(68139..68155,68324..68549,68758..68862,68961..69110,69211..69375,69490..69726)	Acanthamoeba castellanii str. Neff	14912681
ACA1_033670	CDS	ACA1_033670	NW_004457291.1	70045	71968	D	encoded by transcript ACA1_033670A; Rasrelated GTP-binding protein, putative	join(70045..70076,70333..70419,70534..70628,70763..71023,71108..71292,71415..71656,71770..71819,71892..71968)	Acanthamoeba castellanii str. Neff	14912682
ACA1_033680	CDS	ACA1_033680	NW_004457291.1	73662	74367	R	encoded by transcript ACA1_033680A; uncharacterized protein	complement(join(73662..73755,74026..74100,74189..74367))	Acanthamoeba castellanii str. Neff	14912718
ACA1_033700	CDS	ACA1_033700	NW_004457291.1	76631	77929	D	encoded by transcript ACA1_033700A; NAD dependent epimerase/dehydratase, putative	join(76631..76674,76796..76875,77025..77131,77221..77779,77907..77929)	Acanthamoeba castellanii str. Neff	14912710
ACA1_033720	CDS	ACA1_033720	NW_004457291.1	113834	115007	D	encoded by transcript ACA1_033720A; uncharacterized protein	join(113834..114074,114295..114329,114431..114606,114703..114752,114856..115007)	Acanthamoeba castellanii str. Neff	14912712
ACA1_033730	CDS	ACA1_033730	NW_004457291.1	115316	116591	D	encoded by transcript ACA1_033730A; transmembrane protein 56, putative	join(115316..115667,115767..115888,116132..116204,116287..116591)	Acanthamoeba castellanii str. Neff	14912713
ACA1_033740	CDS	ACA1_033740	NW_004457291.1	116786	117300	R	encoded by transcript ACA1_033740A; uncharacterized protein	complement(join(116786..116792,116990..117300))	Acanthamoeba castellanii str. Neff	14912704
ACA1_033760	CDS	ACA1_033760	NW_004457291.1	123525	126016	D	encoded by transcript ACA1_033760A; cytochrome p450 superfamily protein	join(123525..123596,123896..124008,124108..124198,124296..124372,124451..124593,124675..124796,124873..124984,125068..125119,125193..125404,125491..125654,125770..125899,125973..126016)	Acanthamoeba castellanii str. Neff	14912706
ACA1_033770	CDS	ACA1_033770	NW_004457291.1	126489	130878	D	encoded by transcript ACA1_033770A; MYC binding protein 2, putative	join(126489..127553,127698..127859,127917..128633,128731..129392,129501..129571,129656..129846,129980..130105,130184..130305,130404..130509,130598..130714,130804..130878)	Acanthamoeba castellanii str. Neff	14912707
ACA1_033780	CDS	ACA1_033780	NW_004457291.1	131212	132499	R	encoded by transcript ACA1_033780A; uncharacterized protein	complement(join(131212..131366,131463..131628,131720..132499))	Acanthamoeba castellanii str. Neff	14912717
ACA1_033790	CDS	ACA1_033790	NW_004457291.1	132809	134376	R	encoded by transcript ACA1_033790A; uncharacterized protein	complement(join(132809..132855,132935..133307,133921..134376))	Acanthamoeba castellanii str. Neff	14912685
ACA1_039970	CDS	ACA1_039970	NW_004457290.1	6203	6517	D	encoded by transcript ACA1_039970A; uncharacterized protein	join(6203..6367,6398..6517)	Acanthamoeba castellanii str. Neff	14912672
ACA1_039980	CDS	ACA1_039980	NW_004457290.1	7345	8366	D	encoded by transcript ACA1_039980A; oxidoreductase, putative	join(7345..7403,7524..7590,7680..7799,8078..8181,8279..8366)	Acanthamoeba castellanii str. Neff	14912668
ACA1_040190	CDS	ACA1_040190	NW_004457290.1	9285	10940	R	encoded by transcript ACA1_040190A; uncharacterized protein	complement(join(<9285..9333,9412..9503,9598..9674,9749..9798,9865..10064,10177..10610,10676..10940))	Acanthamoeba castellanii str. Neff	14912670
ACA1_040200	CDS	ACA1_040200	NW_004457290.1	11047	12857	R	encoded by transcript ACA1_040200A; AMPactivated protein kinase, putative	complement(join(11047..11631,11643..11809,11865..12089,12166..12299,12381..12471,12540..12629,12776..12857))	Acanthamoeba castellanii str. Neff	14912671
ACA1_040210	CDS	ACA1_040210	NW_004457290.1	13766	14901	D	encoded by transcript ACA1_040210A; mitochondrial uncoupling protein	join(13766..13868,13937..14092,14168..14350,14438..14901)	Acanthamoeba castellanii str. Neff	14912673
ACA1_318090	CDS	ACA1_318090	NW_004457289.1	4	2052	R	encoded by transcript ACA1_318090A; glycosyl hydrolase family 20, catalytic domain containing protein	complement(join(<4..30,139..304,430..522,656..710,755..873,1034..1110,1179..1260,1329..1387,1492..1560,1690..2052))	Acanthamoeba castellanii str. Neff	14912661
ACA1_318300	CDS	ACA1_318300	NW_004457289.1	7589	9016	R	encoded by transcript ACA1_318300A; C2 calcium/lipidbinding (CaLB) region-containing protein	complement(join(7589..7703,7821..7994,8162..8304,8658..8806,8899..9016))	Acanthamoeba castellanii str. Neff	14912662
ACA1_318410	CDS	ACA1_318410	NW_004457289.1	9311	10904	D	encoded by transcript ACA1_318410A; uncharacterized protein	join(9311..10792,10806..10831,10883..10904)	Acanthamoeba castellanii str. Neff	14912664
ACA1_318520	CDS	ACA1_318520	NW_004457289.1	16159	17412	R	encoded by transcript ACA1_318520A; RNA polymerase Rpb7 domain containing protein	complement(join(<16159..16477,16585..16873,16969..17132,17258..17412))	Acanthamoeba castellanii str. Neff	14912667
ACA1_318530	CDS	ACA1_318530	NW_004457289.1	17597	18230	R	encoded by transcript ACA1_318530A; uncharacterized protein	complement(join(17597..17965,18054..18230))	Acanthamoeba castellanii str. Neff	14912665
ACA1_318540	CDS	ACA1_318540	NW_004457289.1	18620	22575	D	encoded by transcript ACA1_318540A; SPX domain containing protein	join(18620..19030,19193..19312,19458..19585,19666..19762,20157..20405,20502..20591,20679..20786,20958..21023,21103..21194,21310..21397,21563..21644,21757..21907,22000..22140,22215..22575)	Acanthamoeba castellanii str. Neff	14912666
ACA1_318550	CDS	ACA1_318550	NW_004457289.1	23427	26887	R	encoded by transcript ACA1_318550A; HECTdomain (ubiquitin-transferase) domain containing protein	complement(join(23427..23550,23632..23701,23778..23927,24009..24105,24201..24437,24505..24630,24731..24857,24969..25183,25273..25386,25499..25638,25747..25900,25985..26142,26234..26464,26565..26729,26806..26887))	Acanthamoeba castellanii str. Neff	14912663
ACA1_139810	CDS	ACA1_139810	NW_004457288.1	24	1319	R	encoded by transcript ACA1_139810A; UDPglucose dehydrogenase	complement(join(<24..185,293..422,564..681,845..1319))	Acanthamoeba castellanii str. Neff	14912624
ACA1_139830	CDS	ACA1_139830	NW_004457288.1	5672	7764	R	encoded by transcript ACA1_139830A; eukaryotic translation initiation factor 3 subunit 6 interacting family protein	complement(join(5672..6409,6476..6721,6826..6998,7102..7203,7282..7308,7393..7451,7517..7658,7704..7764))	Acanthamoeba castellanii str. Neff	14912602
ACA1_139840	CDS	ACA1_139840	NW_004457288.1	8168	10569	D	encoded by transcript ACA1_139840A; receptor mediated endocytosis family member (rme1), putative	join(8168..8343,8478..8639,8756..8909,9005..9164,9277..9412,9508..9627,9742..9881,9975..10326,10461..10569)	Acanthamoeba castellanii str. Neff	14912603
ACA1_139850	CDS	ACA1_139850	NW_004457288.1	11517	12742	R	encoded by transcript ACA1_139850A; uncharacterized protein	complement(join(11517..12020,12161..12742))	Acanthamoeba castellanii str. Neff	14912647
ACA1_139860	CDS	ACA1_139860	NW_004457288.1	14462	15260	D	encoded by transcript ACA1_139860A; EF hand domain containing protein	join(14462..14474,14636..14907,15084..15260)	Acanthamoeba castellanii str. Neff	14912610
ACA1_139870	CDS	ACA1_139870	NW_004457288.1	15350	15973	R	encoded by transcript ACA1_139870A; uncharacterized protein	complement(join(15350..15652,15733..15817,15903..15973))	Acanthamoeba castellanii str. Neff	14912611
ACA1_139880	CDS	ACA1_139880	NW_004457288.1	17856	18584	D	encoded by transcript ACA1_139880A; uncharacterized protein	join(17856..18333,18433..18584)	Acanthamoeba castellanii str. Neff	14912656
ACA1_139890	CDS	ACA1_139890	NW_004457288.1	19487	20051	R	encoded by transcript ACA1_139890A; uncharacterized protein	complement(join(19487..20006,20026..20051))	Acanthamoeba castellanii str. Neff	14912657
ACA1_139910	CDS	ACA1_139910	NW_004457288.1	23078	23516	D	encoded by transcript ACA1_139910A; uncharacterized protein	join(23078..23095,23108..23185,23283..23516)	Acanthamoeba castellanii str. Neff	14912631
ACA1_139930	CDS	ACA1_139930	NW_004457288.1	27561	27791	R	encoded by transcript ACA1_139930A; uncharacterized protein	complement(27561..27791)	Acanthamoeba castellanii str. Neff	14912607
ACA1_139940	CDS	ACA1_139940	NW_004457288.1	27814	28848	D	encoded by transcript ACA1_139940A; uncharacterized protein	join(27814..27860,27881..27934,28053..28848)	Acanthamoeba castellanii str. Neff	14912608
ACA1_140050	CDS	ACA1_140050	NW_004457288.1	28973	29573	R	encoded by transcript ACA1_140050A; uncharacterized protein	complement(join(28973..29269,29568..29573))	Acanthamoeba castellanii str. Neff	14912609
ACA1_140060	CDS	ACA1_140060	NW_004457288.1	29995	31436	R	encoded by transcript ACA1_140060A; ATPase family associated with various cellular activities (AAA) domain containing protein	complement(join(29995..30210,30273..30731,31131..31436))	Acanthamoeba castellanii str. Neff	14912613
ACA1_140170	CDS	ACA1_140170	NW_004457288.1	32073	37815	D	encoded by transcript ACA1_140170A; helicase conserved Cterminal domain containing protein	join(32073..32166,32350..32717,32741..33777,33917..35533,35954..36736,36905..36998,37078..37157,37242..37356,37456..37522,37592..37815)	Acanthamoeba castellanii str. Neff	14912614
ACA1_140180	CDS	ACA1_140180	NW_004457288.1	37881	38905	R	encoded by transcript ACA1_140180A; uncharacterized protein	complement(join(37881..37976,38083..38221,38309..38386,38489..38575,38688..38793,38878..38905))	Acanthamoeba castellanii str. Neff	14912615
ACA1_140190	CDS	ACA1_140190	NW_004457288.1	39574	41961	D	encoded by transcript ACA1_140190A; autophagy protein 4, putative	join(39574..39646,39721..39819,39884..40070,40191..40333,40424..40604,40695..41023,41113..41280,41400..41479,41558..41677,41809..41961)	Acanthamoeba castellanii str. Neff	14912622
ACA1_140200	CDS	ACA1_140200	NW_004457288.1	42504	43553	D	encoded by transcript ACA1_140200A; uncharacterized protein	join(42504..42544,42733..42838,43031..43076,43375..43553)	Acanthamoeba castellanii str. Neff	14912623
ACA1_140210	CDS	ACA1_140210	NW_004457288.1	43734	45607	R	encoded by transcript ACA1_140210A; uncharacterized protein	complement(join(43734..43841,43971..44049,44142..44277,44415..44427,44576..44617,44699..44806,44920..45000,45083..45132,45242..45453,45540..45607))	Acanthamoeba castellanii str. Neff	14912645
ACA1_140220	CDS	ACA1_140220	NW_004457288.1	45757	46799	R	encoded by transcript ACA1_140220A; uncharacterized protein	complement(join(45757..45898,46033..46799))	Acanthamoeba castellanii str. Neff	14912646
ACA1_140230	CDS	ACA1_140230	NW_004457288.1	47104	47862	R	encoded by transcript ACA1_140230A; uncharacterized protein	complement(join(47104..47223,47310..47450,47548..47862))	Acanthamoeba castellanii str. Neff	14912632
ACA1_140250	CDS	ACA1_140250	NW_004457288.1	54703	57118	R	encoded by transcript ACA1_140250A; uncharacterized protein	complement(join(54703..54762,54861..54982,55112..55238,55342..55529,55627..55738,55807..55875,56020..56213,56330..56451,56599..56828,56912..57118))	Acanthamoeba castellanii str. Neff	14912626
ACA1_140270	CDS	ACA1_140270	NW_004457288.1	59750	60655	R	encoded by transcript ACA1_140270A; cwf21 protein	complement(join(59750..59855,59910..60655))	Acanthamoeba castellanii str. Neff	14912628
ACA1_140380	CDS	ACA1_140380	NW_004457288.1	61267	69706	D	encoded by transcript ACA1_140380A; uncharacterized protein	join(61267..62481,62560..62636,62756..62805,62901..63032,63106..63202,63292..63351,63408..63544,63621..63634,63702..63733,63800..63891,64001..64092,64190..64279,64377..64483,64578..64746,64834..65073,65161..65462,65524..65620,65710..66254,66337..66422,66511..66600,66702..66813,66900..67063,67189..68291,68377..69118,69192..69706)	Acanthamoeba castellanii str. Neff	14912629
ACA1_140390	CDS	ACA1_140390	NW_004457288.1	69792	74487	D	encoded by transcript ACA1_140390A; uncharacterized protein	join(69792..69839,70053..70175,70250..70479,70548..70669,70726..70809,70889..70979,71069..71282,71498..71635,71662..71904,72256..72360,72449..72571,72633..72917,72936..73089,73192..73275,73352..73442,73556..73772,73895..74023,74087..74258,74333..74487)	Acanthamoeba castellanii str. Neff	14912658
ACA1_140400	CDS	ACA1_140400	NW_004457288.1	75008	76706	D	encoded by transcript ACA1_140400A; Fbox domain containing protein	join(75008..75097,75200..75322,75619..75656,75756..75969,76078..76215,76251..76416,76519..76706)	Acanthamoeba castellanii str. Neff	14912625
ACA1_140510	CDS	ACA1_140510	NW_004457288.1	76817	79091	D	encoded by transcript ACA1_140510A; Fbox domain containing protein	join(76817..76915,77009..77675,77778..77864,77960..78050,78161..78380,78484..78612,78712..78835,78955..79091)	Acanthamoeba castellanii str. Neff	14912659
ACA1_140520	CDS	ACA1_140520	NW_004457288.1	79299	80013	D	encoded by transcript ACA1_140520A; uncharacterized protein	join(79299..79523,79599..79757,79834..80013)	Acanthamoeba castellanii str. Neff	14912660
ACA1_140530	CDS	ACA1_140530	NW_004457288.1	80804	82885	R	encoded by transcript ACA1_140530A; F-box domain containing protein	complement(join(80804..80906,80979..81133,81303..81445,81579..81723,81860..82063,82155..82269,82371..82636,82721..82885))	Acanthamoeba castellanii str. Neff	14912648
ACA1_140540	CDS	ACA1_140540	NW_004457288.1	83555	84989	D	encoded by transcript ACA1_140540A; MORN repeatcontaining protein	join(83555..83788,83883..84024,84098..84293,84389..84681,84772..84989)	Acanthamoeba castellanii str. Neff	14912649
ACA1_140550	CDS	ACA1_140550	NW_004457288.1	85377	87550	D	encoded by transcript ACA1_140550A; uncharacterized protein	join(85377..85505,85821..85922,86018..86115,86239..86329,86430..86539,86620..87550)	Acanthamoeba castellanii str. Neff	14912650
ACA1_140560	CDS	ACA1_140560	NW_004457288.1	87642	88080	R	encoded by transcript ACA1_140560A; RNA polymerase III, putative	complement(join(87642..87766,87882..88080))	Acanthamoeba castellanii str. Neff	14912604
ACA1_140570	CDS	ACA1_140570	NW_004457288.1	88459	88921	D	encoded by transcript ACA1_140570A; uncharacterized protein	join(88459..88595,88714..88921)	Acanthamoeba castellanii str. Neff	14912605
ACA1_140580	CDS	ACA1_140580	NW_004457288.1	89135	91055	R	encoded by transcript ACA1_140580A; SAM domain (Sterile alpha motif) domain containing protein	complement(join(89135..89206,89289..89393,89476..89564,89698..89798,89906..90027,90161..90207,90306..90408,90498..90626,90726..90806,90900..91055))	Acanthamoeba castellanii str. Neff	14912653
ACA1_140590	CDS	ACA1_140590	NW_004457288.1	91320	94105	D	encoded by transcript ACA1_140590A; EF hand domain containing protein	join(91320..91484,91633..91799,91940..92047,92145..92227,92292..92396,92474..92566,92633..92757,92827..92900,92999..93130,93195..93289,93372..93449,93535..93673,93758..93852,93954..94105)	Acanthamoeba castellanii str. Neff	14912654
ACA1_140600	CDS	ACA1_140600	NW_004457288.1	94263	96305	R	encoded by transcript ACA1_140600A; Transmembrane protein 34 family protein	complement(join(94263..94493,94769..94843,94924..95129,95257..95330,95380..95402,95434..95481,95574..95814,95998..96305))	Acanthamoeba castellanii str. Neff	14912655
ACA1_140610	CDS	ACA1_140610	NW_004457288.1	96431	103760	R	encoded by transcript ACA1_140610A; Poly(ADPribose) polymerase catalytic domain containing protein	complement(join(96431..96516,96625..96789,96877..97009,97136..97399,97497..97637,97730..97891,97998..98270,98398..98611,98695..98780,98884..98978,99052..99109,99186..99820,99908..100009,100123..100234,100315..100475,100548..100641,100886..100951,101048..101142,101216..101273,101420..102060,102124..102225,102331..102442,102503..102663,102823..102916,102997..103082,103217..103325,103447..103615,103729..103760))	Acanthamoeba castellanii str. Neff	14912616
ACA1_140720	CDS	ACA1_140720	NW_004457288.1	104333	105283	R	encoded by transcript ACA1_140720A; GATA zinc finger domain containing protein	complement(join(104333..104528,104730..105133,105218..105283))	Acanthamoeba castellanii str. Neff	14912639
ACA1_140730	CDS	ACA1_140730	NW_004457288.1	106037	110200	R	encoded by transcript ACA1_140730A; kelch repeat protein	complement(join(106037..106657,106684..107648,107708..107815,107924..108004,108078..108224,108334..108457,108539..108602,108686..108800,108891..108943,109028..109142,109263..109354,109459..109513,109700..109758,109848..110200))	Acanthamoeba castellanii str. Neff	14912636
ACA1_140740	CDS	ACA1_140740	NW_004457288.1	110316	112554	R	encoded by transcript ACA1_140740A; GPI transamidase subunit PIGU	complement(join(110316..110480,110568..110710,110786..110913,111012..111169,111259..111374,111527..111637,111706..112245,112410..112554))	Acanthamoeba castellanii str. Neff	14912637
ACA1_140750	CDS	ACA1_140750	NW_004457288.1	113170	113569	D	encoded by transcript ACA1_140750A; HMG (high mobility group) box domain containing protein	join(113170..113373,113456..113569)	Acanthamoeba castellanii str. Neff	14912640
ACA1_140760	CDS	ACA1_140760	NW_004457288.1	114414	115072	D	encoded by transcript ACA1_140760A; uncharacterized protein	join(<114414..114662,114884..115072)	Acanthamoeba castellanii str. Neff	14912641
ACA1_140770	CDS	ACA1_140770	NW_004457288.1	115135	117889	D	encoded by transcript ACA1_140770A; ATPase, AAA domain containing protein	join(115135..115159,115274..115399,115491..115603,115698..115771,115843..115967,116075..116196,116270..116366,116444..116530,116687..116793,116864..117011,117138..117224,117328..117409,117500..117581,117656..117889)	Acanthamoeba castellanii str. Neff	14912642
ACA1_140780	CDS	ACA1_140780	NW_004457288.1	119022	121901	D	encoded by transcript ACA1_140780A; zinc carboxypeptidase superfamily protein	join(119022..119537,119624..119719,119804..119860,119968..120065,120164..120271,120361..120528,120613..120751,120886..121017,121095..121320,121401..121660,121743..121901)	Acanthamoeba castellanii str. Neff	14912643
ACA1_140790	CDS	ACA1_140790	NW_004457288.1	122530	123337	D	encoded by transcript ACA1_140790A; GATA zinc finger domain containing protein	join(122530..122918,123157..123337)	Acanthamoeba castellanii str. Neff	14912644
ACA1_140800	CDS	ACA1_140800	NW_004457288.1	123449	124872	R	encoded by transcript ACA1_140800A; uncharacterized protein	complement(join(123449..123568,123692..124067,124213..124511,124600..124702,124835..124872))	Acanthamoeba castellanii str. Neff	14912651
ACA1_140910	CDS	ACA1_140910	NW_004457288.1	128197	129266	R	encoded by transcript ACA1_140910A; Fbox domain containing protein	complement(join(128197..128223,128259..128535,128644..128764,128873..128933,129024..129266))	Acanthamoeba castellanii str. Neff	14912652
ACA1_140920	CDS	ACA1_140920	NW_004457288.1	129495	131304	R	encoded by transcript ACA1_140920A; Ser/Thr protein phosphatase superfamily	complement(join(129495..129650,129733..129876,129963..130009,130086..130185,130328..130406,130448..130555,130628..130672,130747..130798,130887..130934,131023..131063,131141..131210,131283..131304))	Acanthamoeba castellanii str. Neff	14912620
ACA1_140930	CDS	ACA1_140930	NW_004457288.1	132115	133108	R	encoded by transcript ACA1_140930A; isochorismatase domain containing protein 2, mitochondrial, putative	complement(join(132115..132171,132243..132416,132501..132593,132611..132750,132845..132917,132980..133108))	Acanthamoeba castellanii str. Neff	14912621
ACA1_140940	CDS	ACA1_140940	NW_004457288.1	135342	136826	R	encoded by transcript ACA1_140940A; WD domain, Gbeta repeat-containing protein	complement(join(135342..136123,136241..136826))	Acanthamoeba castellanii str. Neff	14912617
ACA1_140950	CDS	ACA1_140950	NW_004457288.1	136997	137689	R	encoded by transcript ACA1_140950A; multifunctional cellulase	complement(join(136997..137073,137150..137314,137446..137689))	Acanthamoeba castellanii str. Neff	14912618
ACA1_140960	CDS	ACA1_140960	NW_004457288.1	137709	138692	R	encoded by transcript ACA1_140960A; uncharacterized protein	complement(join(137709..137746,137839..138272,138373..138557,138615..138692))	Acanthamoeba castellanii str. Neff	14912619
ACA1_140970	CDS	ACA1_140970	NW_004457288.1	138930	140889	D	encoded by transcript ACA1_140970A; SH3 domain containing protein	join(138930..139310,139478..139848,139949..140423,140497..140889)	Acanthamoeba castellanii str. Neff	14912634
ACA1_140980	CDS	ACA1_140980	NW_004457288.1	141275	143017	R	encoded by transcript ACA1_140980A; calponin domain containing protein	complement(join(141275..141451,141552..141627,141755..141895,142069..142202,142345..142440,142599..142760,142889..143017))	Acanthamoeba castellanii str. Neff	14912635
ACA1_141090	CDS	ACA1_141090	NW_004457288.1	145580	146941	R	encoded by transcript ACA1_141090A; SAM domain (Sterile alpha motif) domain containing protein	complement(join(<145580..145811,145922..146211,146358..146452,146619..146735,146821..146941))	Acanthamoeba castellanii str. Neff	14912638
ACA1_301000	CDS	ACA1_301000	NW_004457287.1	53	1333	R	encoded by transcript ACA1_301000A; ABC transporter, ATPbinding domain containing protein	complement(join(<53..148,239..513,575..724,863..1163,1262..1333))	Acanthamoeba castellanii str. Neff	14912601
ACA1_301010	CDS	ACA1_301010	NW_004457287.1	1986	3534	D	encoded by transcript ACA1_301010A; Filamin repeat domain containing protein	join(1986..2414,2500..2608,2761..2871,2966..3067,3181..3287,3397..>3534)	Acanthamoeba castellanii str. Neff	14912599
ACA1_301120	CDS	ACA1_301120	NW_004457287.1	8670	10671	R	encoded by transcript ACA1_301120A; OTUlike cysteine protease	complement(join(8670..8965,9039..9195,9298..9459,9556..9618,9709..9817,9929..10671))	Acanthamoeba castellanii str. Neff	14912600
ACA1_013980	CDS	ACA1_013980	NW_004457286.1	6056	6436	R	encoded by transcript ACA1_013980A; uncharacterized protein	complement(6056..6436)	Acanthamoeba castellanii str. Neff	14912595
ACA1_014100	CDS	ACA1_014100	NW_004457286.1	8009	8752	D	encoded by transcript ACA1_014100A; succinateCoA ligase, GDP-forming, beta subunit, putative	join(<8009..8165,8245..8350,8458..8752)	Acanthamoeba castellanii str. Neff	14912594
ACA1_014210	CDS	ACA1_014210	NW_004457286.1	11749	13053	R	encoded by transcript ACA1_014210A; uncharacterized protein	complement(join(11749..12588,12961..13053))	Acanthamoeba castellanii str. Neff	14912592
ACA1_014220	CDS	ACA1_014220	NW_004457286.1	13300	14924	R	encoded by transcript ACA1_014220A; protein kinase	complement(join(13300..13531,13614..13783,13858..14071,14162..14421,14537..14715,14828..14924))	Acanthamoeba castellanii str. Neff	14912593
ACA1_014230	CDS	ACA1_014230	NW_004457286.1	16651	17133	R	encoded by transcript ACA1_014230A; uncharacterized protein	complement(join(16651..16875,16932..17006,17062..17133))	Acanthamoeba castellanii str. Neff	14912596
ACA1_014240	CDS	ACA1_014240	NW_004457286.1	17498	20232	R	encoded by transcript ACA1_014240A; protein kinase	complement(join(17498..18606,18675..18833,18912..19083,19166..19304,19387..19505,19553..19657,19752..19866,19988..20232))	Acanthamoeba castellanii str. Neff	14912597
ACA1_014250	CDS	ACA1_014250	NW_004457286.1	20955	21699	R	encoded by transcript ACA1_014250A; cytochrome b5 family protein	complement(join(20955..21059,21208..21236,21461..21506,21643..21699))	Acanthamoeba castellanii str. Neff	14912591
ACA1_015310	CDS	ACA1_015310	NW_004457285.1	551	4511	R	encoded by transcript ACA1_015310A; RhoGEF domain containing protein	complement(join(551..1251,1401..1487,1572..1618,1691..1773,1860..1943,2022..2115,2199..2346,2429..2558,2634..2741,2826..2877,2983..3098,3301..3408,3505..3600,3676..3783,3855..3931,4029..4113,4191..4279,4373..4511))	Acanthamoeba castellanii str. Neff	14912587
ACA1_015320	CDS	ACA1_015320	NW_004457285.1	5571	5970	D	encoded by transcript ACA1_015320A; uncharacterized protein	join(5571..5597,5671..5790,5887..5970)	Acanthamoeba castellanii str. Neff	14912589
ACA1_015330	CDS	ACA1_015330	NW_004457285.1	6133	7484	R	encoded by transcript ACA1_015330A; CBS domain containing protein	complement(join(6133..6372,6442..6537,6621..6773,6848..6966,7029..7098,7158..7289,7371..7484))	Acanthamoeba castellanii str. Neff	14912588
ACA1_015340	CDS	ACA1_015340	NW_004457285.1	7998	10195	D	encoded by transcript ACA1_015340A; uncharacterized protein	join(7998..8651,8725..8840,8940..9024,9100..9183,9277..9396,9469..9559,9651..9823,9899..10195)	Acanthamoeba castellanii str. Neff	14912584
ACA1_015350	CDS	ACA1_015350	NW_004457285.1	10285	12076	D	encoded by transcript ACA1_015350A; dihydrodipicolinate synthetase, putative	join(10285..10320,10469..10582,10684..10800,10880..10999,11062..11112,11225..11401,11509..11631,11724..11838,11910..12076)	Acanthamoeba castellanii str. Neff	14912585
ACA1_015360	CDS	ACA1_015360	NW_004457285.1	12161	13909	R	encoded by transcript ACA1_015360A; uncharacterized protein	complement(join(12161..12472,12591..12824,12932..13092,13184..13372,13519..13909))	Acanthamoeba castellanii str. Neff	14912586
ACA1_015370	CDS	ACA1_015370	NW_004457285.1	14137	14943	R	encoded by transcript ACA1_015370A; uncharacterized protein	complement(join(14137..14178,14262..14672,14689..14712,14839..14943))	Acanthamoeba castellanii str. Neff	14912590
ACA1_077510	CDS	ACA1_077510	NW_004457284.1	1752	3281	R	encoded by transcript ACA1_077510A; uncharacterized protein	complement(join(1752..1904,1973..2073,2285..2374,2478..2590,2688..2775,2871..2935,3001..3281))	Acanthamoeba castellanii str. Neff	14912580
ACA1_077520	CDS	ACA1_077520	NW_004457284.1	3418	6205	R	encoded by transcript ACA1_077520A; uncharacterized protein	complement(join(3418..3605,3718..3786,3842..4018,4140..4283,4406..4493,4594..4649,4782..4879,5024..5118,5239..5363,5461..5573,5698..5824,5948..6013,6097..>6205))	Acanthamoeba castellanii str. Neff	14912581
ACA1_077630	CDS	ACA1_077630	NW_004457284.1	7408	10898	R	encoded by transcript ACA1_077630A; uncharacterized protein	complement(join(<7408..7668,7763..8035,8131..8346,8402..8593,8674..8798,8908..8990,9054..10204,10223..10420,10533..10615,10772..10898))	Acanthamoeba castellanii str. Neff	14912583
ACA1_077640	CDS	ACA1_077640	NW_004457284.1	11119	12903	R	encoded by transcript ACA1_077640A; uncharacterized protein	complement(join(11119..11769,11915..11976,12055..12217,12580..12712,12797..>12903))	Acanthamoeba castellanii str. Neff	14912582
ACA1_100770	CDS	ACA1_100770	NW_004457283.1	226	1043	D	encoded by transcript ACA1_100770A; uncharacterized protein	join(226..383,459..630,735..1043)	Acanthamoeba castellanii str. Neff	14912569
ACA1_100780	CDS	ACA1_100780	NW_004457283.1	1006	2740	R	encoded by transcript ACA1_100780A; uncharacterized protein	complement(join(1006..1183,1290..1673,1747..1929,2066..2271,2471..2740))	Acanthamoeba castellanii str. Neff	14912541
ACA1_100890	CDS	ACA1_100890	NW_004457283.1	3330	7398	R	encoded by transcript ACA1_100890A; PH domain containing protein	complement(join(3330..3373,3432..4587,4681..4804,4890..4958,5038..5152,5236..5917,5973..6107,6175..6284,6386..6524,6611..6701,6821..6930,7042..7179,7264..7398))	Acanthamoeba castellanii str. Neff	14912542
ACA1_100900	CDS	ACA1_100900	NW_004457283.1	7408	10563	R	encoded by transcript ACA1_100900A; PH domain containing protein	complement(join(<7408..7755,7862..7999,8091..8153,8234..8340,8440..8561,8710..8919,9015..9118,9351..9542,9618..9690,9778..9930,10013..10139,10235..10315,10509..10563))	Acanthamoeba castellanii str. Neff	14912554
ACA1_100910	CDS	ACA1_100910	NW_004457283.1	10851	14478	R	encoded by transcript ACA1_100910A; sensory transduction histidine kinase, putative	complement(join(10851..11011,11157..11341,11374..11531,11612..12163,12259..12657,12713..12867,12948..13498,13569..13651,13718..13843,13918..14478))	Acanthamoeba castellanii str. Neff	14912555
ACA1_100920	CDS	ACA1_100920	NW_004457283.1	15814	18636	R	encoded by transcript ACA1_100920A; COP1, putative	complement(join(15814..15915,16000..16153,16213..16278,16340..16457,16546..16662,16752..16851,16938..17028,17103..17227,17308..17746,17890..18083,18171..18292,18369..18473,18579..18636))	Acanthamoeba castellanii str. Neff	14912550
ACA1_100930	CDS	ACA1_100930	NW_004457283.1	19569	24393	D	encoded by transcript ACA1_100930A; DNA topoisomerase	join(19569..19708,19814..20415,20553..20606,20673..20753,20845..20960,21053..21110,21182..21314,21382..21456,21550..21622,21711..21794,21840..22093,22135..22323,22404..22483,22575..22700,22787..23200,23320..23543,23629..23829,23905..24081,24157..24393)	Acanthamoeba castellanii str. Neff	14912572
ACA1_100940	CDS	ACA1_100940	NW_004457283.1	24867	25934	D	encoded by transcript ACA1_100940A; 5'-nucleotidase	24867..25934	Acanthamoeba castellanii str. Neff	14912551
ACA1_100950	CDS	ACA1_100950	NW_004457283.1	25934	29570	D	encoded by transcript ACA1_100950A; serine/threonine kinase	join(25934..27145,27228..27324,27430..28276,28496..29570)	Acanthamoeba castellanii str. Neff	14912545
ACA1_101060	CDS	ACA1_101060	NW_004457283.1	30123	31228	D	encoded by transcript ACA1_101060A; inosineuridine preferring nucleoside hydrolase family protein	join(30123..30482,30566..31228)	Acanthamoeba castellanii str. Neff	14912546
ACA1_101070	CDS	ACA1_101070	NW_004457283.1	31442	34116	R	encoded by transcript ACA1_101070A; glycosyltransferase, putative	complement(join(31442..31590,31629..31743,31836..31957,32033..32064,32135..32176,32247..32313,32381..32450,32528..32567,32647..32724,32814..32881,32981..33040,33132..33229,33321..33432,33521..33618,33724..33874,33910..33967,34073..34116))	Acanthamoeba castellanii str. Neff	14912547
ACA1_101080	CDS	ACA1_101080	NW_004457283.1	34261	36311	R	encoded by transcript ACA1_101080A; Serine/threonine phosphatase	complement(join(34261..34390,34456..34606,34687..34758,34856..35065,35147..35292,35382..35507,35582..35671,35771..35804,35875..36033,36206..36311))	Acanthamoeba castellanii str. Neff	14912556
ACA1_101090	CDS	ACA1_101090	NW_004457283.1	36541	38237	R	encoded by transcript ACA1_101090A; uncharacterized protein	complement(join(36541..36687,36785..37114,37184..37433,37490..37656,37777..38081,38180..38237))	Acanthamoeba castellanii str. Neff	14912543
ACA1_101100	CDS	ACA1_101100	NW_004457283.1	38390	40922	R	encoded by transcript ACA1_101100A; Chromatin Organization Modifier domain containing protein	complement(join(38390..38426,38495..39170,39254..39421,39509..39636,39697..39762,39839..39993,40073..40648,40726..40887,40899..40922))	Acanthamoeba castellanii str. Neff	14912544
ACA1_101310	CDS	ACA1_101310	NW_004457283.1	43926	44664	D	encoded by transcript ACA1_101310A; uncharacterized protein	join(43926..44163,44246..44350,44426..44664)	Acanthamoeba castellanii str. Neff	14912552
ACA1_101320	CDS	ACA1_101320	NW_004457283.1	44958	46553	D	encoded by transcript ACA1_101320A; von Willebrand factor type A domain containing protein	join(44958..45037,45121..45204,45274..45471,45600..45645,45658..45721,45820..46011,46094..46283,46359..46468,46543..46553)	Acanthamoeba castellanii str. Neff	14912553
ACA1_101330	CDS	ACA1_101330	NW_004457283.1	46817	47735	D	encoded by transcript ACA1_101330A; uncharacterized protein	join(46817..46882,46980..47022,47092..47181,47193..47293,47316..47438,47523..47735)	Acanthamoeba castellanii str. Neff	14912563
ACA1_101340	CDS	ACA1_101340	NW_004457283.1	47807	49627	R	encoded by transcript ACA1_101340A; leucine rich repeat domain containing protein	complement(join(47807..48033,48149..48345,48421..48541,48645..49093,49204..49273,49354..49627))	Acanthamoeba castellanii str. Neff	14912564
ACA1_101350	CDS	ACA1_101350	NW_004457283.1	49816	50369	R	encoded by transcript ACA1_101350A; uncharacterized protein	complement(join(49816..50142,50220..50369))	Acanthamoeba castellanii str. Neff	14912573
ACA1_101360	CDS	ACA1_101360	NW_004457283.1	50426	51803	R	encoded by transcript ACA1_101360A; PH domain containing protein	complement(join(50426..50823,50929..51639,51761..51803))	Acanthamoeba castellanii str. Neff	14912574
ACA1_101370	CDS	ACA1_101370	NW_004457283.1	52058	55342	D	encoded by transcript ACA1_101370A; uncharacterized protein	join(52058..52105,52185..52487,52596..53183,53421..53486,53564..53805,53883..53964,54056..54282,54374..54581,54659..54725,54801..55342)	Acanthamoeba castellanii str. Neff	14912575
ACA1_101380	CDS	ACA1_101380	NW_004457283.1	55467	56326	D	encoded by transcript ACA1_101380A; haloacid dehalogenase (HAD) superfamily protein	join(55467..55676,55758..56117,56201..56326)	Acanthamoeba castellanii str. Neff	14912578
ACA1_101390	CDS	ACA1_101390	NW_004457283.1	56358	56814	R	encoded by transcript ACA1_101390A; complex 1 protein (lyr family) protein	complement(join(56358..56417,56498..56621,56696..56814))	Acanthamoeba castellanii str. Neff	14912579
ACA1_101400	CDS	ACA1_101400	NW_004457283.1	56987	57947	R	encoded by transcript ACA1_101400A; splicing factor 3a subunit 2, putative	complement(join(56987..57025,57157..57786,57927..57947))	Acanthamoeba castellanii str. Neff	14912565
ACA1_101410	CDS	ACA1_101410	NW_004457283.1	58223	58677	D	encoded by transcript ACA1_101410A; uncharacterized protein	join(58223..58353,58440..58677)	Acanthamoeba castellanii str. Neff	14912566
ACA1_101420	CDS	ACA1_101420	NW_004457283.1	58779	61228	D	encoded by transcript ACA1_101420A; copine subfamily protein	join(58779..58842,58914..59022,59108..59222,59316..59443,59528..59599,59674..59791,59894..60177,60188..60371,60432..60509,60606..60671,60751..60930,61046..61090,61187..61228)	Acanthamoeba castellanii str. Neff	14912567
ACA1_101430	CDS	ACA1_101430	NW_004457283.1	61213	62559	R	encoded by transcript ACA1_101430A; uncharacterized protein	complement(61213..62559)	Acanthamoeba castellanii str. Neff	14912539
ACA1_101440	CDS	ACA1_101440	NW_004457283.1	62948	64024	R	encoded by transcript ACA1_101440A; uncharacterized protein	complement(join(62948..63013,63095..63169,63264..63329,63412..63534,63608..64024))	Acanthamoeba castellanii str. Neff	14912540
ACA1_101450	CDS	ACA1_101450	NW_004457283.1	64439	64936	D	encoded by transcript ACA1_101450A; uncharacterized protein	64439..64936	Acanthamoeba castellanii str. Neff	14912560
ACA1_101460	CDS	ACA1_101460	NW_004457283.1	65353	68867	R	encoded by transcript ACA1_101460A; DNAdependent RNA polymerase	complement(join(65353..65582,65699..65965,66063..66235,66340..66807,66906..67057,67159..67275,67377..68867))	Acanthamoeba castellanii str. Neff	14912561
ACA1_101470	CDS	ACA1_101470	NW_004457283.1	69102	69951	D	encoded by transcript ACA1_101470A; dynactin 4 isoform 2, putative	join(69102..69230,69301..69416,69478..69592,69697..69951)	Acanthamoeba castellanii str. Neff	14912562
ACA1_101480	CDS	ACA1_101480	NW_004457283.1	70031	72432	D	encoded by transcript ACA1_101480A; Prokumamolisin, activation domain containing protein	join(70031..70189,70267..70419,70490..70758,70820..71052,71134..71286,71377..71474,71552..71675,71734..71835,71925..72148,72210..72293,72367..72432)	Acanthamoeba castellanii str. Neff	14912548
ACA1_101490	CDS	ACA1_101490	NW_004457283.1	72537	73834	R	encoded by transcript ACA1_101490A; methyltransferase domain containing protein	complement(join(72537..72854,72923..73116,73187..73252,73317..73433,73538..73692,73770..73834))	Acanthamoeba castellanii str. Neff	14912549
ACA1_101500	CDS	ACA1_101500	NW_004457283.1	74755	78496	D	encoded by transcript ACA1_101500A; PH domain containing protein	join(74755..74805,74881..74991,75071..75193,75283..75444,75517..75719,75832..75969,76037..76337,76416..76536,76604..76805,76878..77118,77191..77508,77587..77728,77794..77949,78018..78496)	Acanthamoeba castellanii str. Neff	14912537
ACA1_101510	CDS	ACA1_101510	NW_004457283.1	78684	82604	D	encoded by transcript ACA1_101510A; leucine-tRNA ligase	join(78684..79116,79226..79287,79386..79953,80033..80489,80579..80750,80838..81199,81308..82604)	Acanthamoeba castellanii str. Neff	14912538
ACA1_101520	CDS	ACA1_101520	NW_004457283.1	82734	85836	R	encoded by transcript ACA1_101520A; ankyrin repeat-containing protein	complement(join(82734..82939,83019..83287,83363..83643,83722..83915,84068..84188,84293..84431,84512..84648,84777..84815,84891..85099,85206..85279,85366..85470,85542..85611,85773..85836))	Acanthamoeba castellanii str. Neff	14912576
ACA1_101530	CDS	ACA1_101530	NW_004457283.1	86180	87876	R	encoded by transcript ACA1_101530A; 6phosphogluconate dehydrogenase NAD-binding domain containing protein	complement(join(86180..86287,86384..86478,86547..86623,86677..86771,86840..86886,86952..87083,87170..87325,87407..87522,87586..87651,87737..87876))	Acanthamoeba castellanii str. Neff	14912577
ACA1_101540	CDS	ACA1_101540	NW_004457283.1	88281	91296	D	encoded by transcript ACA1_101540A; ubiquitin carboxyl-terminal hydrolase	join(88281..88428,88581..88651,88746..89189,89271..89350,89459..89552,89656..91296)	Acanthamoeba castellanii str. Neff	14912570
ACA1_101550	CDS	ACA1_101550	NW_004457283.1	91790	93570	D	encoded by transcript ACA1_101550A; WD domain, G-beta repeat-containing protein	join(91790..91970,92046..92292,92359..92452,92526..92670,92691..92749,92782..92890,92963..93083,93169..93297,93444..93570)	Acanthamoeba castellanii str. Neff	14912571
ACA1_101560	CDS	ACA1_101560	NW_004457283.1	93856	96969	D	encoded by transcript ACA1_101560A; 66-kDa stress protein p66, putative	join(93856..93960,94037..94130,94248..94369,94476..94566,94691..94923,94988..95055,95161..95314,95429..95559,95676..96050,96154..96247,96337..96729,96835..96969)	Acanthamoeba castellanii str. Neff	14912557
ACA1_101570	CDS	ACA1_101570	NW_004457283.1	98027	100119	R	encoded by transcript ACA1_101570A; uncharacterized protein	complement(join(98027..98490,98582..98774,98788..98857,98931..98989,99000..99245,99278..99532,99620..99843,99924..100119))	Acanthamoeba castellanii str. Neff	14912558
ACA1_101580	CDS	ACA1_101580	NW_004457283.1	101202	101776	D	encoded by transcript ACA1_101580A; Actininteracting protein, putative	join(101202..101205,101355..101536,101642..101776)	Acanthamoeba castellanii str. Neff	14912559
ACA1_101690	CDS	ACA1_101690	NW_004457283.1	102352	102714	R	encoded by transcript ACA1_101690A; uncharacterized protein	complement(102352..>102714)	Acanthamoeba castellanii str. Neff	14912568
ACA1_025670	CDS	ACA1_025670	NW_004457282.1	17	3690	R	encoded by transcript ACA1_025670A; DOMON domain containing protein	complement(join(17..79,203..307,391..591,690..820,896..982,1122..1279,1345..1478,1609..1698,1800..1888,1977..2068,2142..2247,2303..2410,2481..2562,2666..2779,2864..2912,2970..3069,3160..3217,3294..3345,3427..3502,3621..3690))	Acanthamoeba castellanii str. Neff	14912532
ACA1_025680	CDS	ACA1_025680	NW_004457282.1	4065	4911	R	encoded by transcript ACA1_025680A; uncharacterized protein	complement(join(4065..4100,4212..4372,4460..4613,4684..4911))	Acanthamoeba castellanii str. Neff	14912536
ACA1_025690	CDS	ACA1_025690	NW_004457282.1	5166	6333	R	encoded by transcript ACA1_025690A; Fibrillarin, putative	complement(join(5166..5576,5677..5850,5995..6333))	Acanthamoeba castellanii str. Neff	14912531
ACA1_025700	CDS	ACA1_025700	NW_004457282.1	6666	7962	R	encoded by transcript ACA1_025700A; DHHC zinc finger domain containing protein	complement(join(6666..6810,6881..6978,7056..7142,7246..7305,7380..7510,7578..7603,7691..7794,7900..7962))	Acanthamoeba castellanii str. Neff	14912535
ACA1_025710	CDS	ACA1_025710	NW_004457282.1	8412	10083	R	encoded by transcript ACA1_025710A; ubiquitin domain containing protein	complement(join(8412..8681,8776..8934,9019..9142,9241..9373,9462..9578,9657..10083))	Acanthamoeba castellanii str. Neff	14912533
ACA1_025720	CDS	ACA1_025720	NW_004457282.1	10407	11855	D	encoded by transcript ACA1_025720A; Hypothetical protein	join(10407..10454,10563..10733,10820..10974,11051..11366,11442..11516,11574..11855)	Acanthamoeba castellanii str. Neff	14912534
ACA1_025730	CDS	ACA1_025730	NW_004457282.1	12708	13736	D	encoded by transcript ACA1_025730A; uncharacterized protein	join(12708..12862,13097..13277,13400..13515,13609..>13736)	Acanthamoeba castellanii str. Neff	14912530
ACA1_297530	CDS	ACA1_297530	NW_004457281.1	224	1611	R	encoded by transcript ACA1_297530A; uncharacterized protein	complement(join(224..366,459..554,637..759,861..931,1005..1045,1127..1266,1336..1426,1495..1611))	Acanthamoeba castellanii str. Neff	14912529
ACA1_297540	CDS	ACA1_297540	NW_004457281.1	1708	3146	D	encoded by transcript ACA1_297540A; WD domain, G-beta repeat-containing protein	join(1708..1770,1872..1972,2012..2142,2240..2306,2428..2644,2716..2856,2943..2961,3028..3146)	Acanthamoeba castellanii str. Neff	14912528
ACA1_297650	CDS	ACA1_297650	NW_004457281.1	9287	10051	R	encoded by transcript ACA1_297650A; PH domain containing protein	complement(join(9287..9370,9440..9574,9687..9809,9905..10051))	Acanthamoeba castellanii str. Neff	14912527
ACA1_352950	CDS	ACA1_352950	NW_004457280.1	2017	2319	R	encoded by transcript ACA1_352950A; uncharacterized protein	complement(<2017..2319)	Acanthamoeba castellanii str. Neff	14912526
ACA1_352960	CDS	ACA1_352960	NW_004457280.1	2418	3707	D	encoded by transcript ACA1_352960A; GTPbinding protein	<2418..3707	Acanthamoeba castellanii str. Neff	14912524
ACA1_352970	CDS	ACA1_352970	NW_004457280.1	4278	7536	R	encoded by transcript ACA1_352970A; elongation factor 2, putative	complement(join(4278..4655,5009..5320,5432..5650,5725..5870,5961..6093,6176..6410,6478..6594,6683..6828,6923..7356,7464..7536))	Acanthamoeba castellanii str. Neff	14912522
ACA1_353180	CDS	ACA1_353180	NW_004457280.1	8839	10627	R	encoded by transcript ACA1_353180A; HsKin17 protein, putative	complement(join(8839..9024,9091..9448,9462..9655,9694..9947,10058..10215,10296..10417,10499..10627))	Acanthamoeba castellanii str. Neff	14912523
ACA1_353190	CDS	ACA1_353190	NW_004457280.1	10746	13612	R	encoded by transcript ACA1_353190A; cytochrome p450 superfamily protein	complement(join(10746..10837,10941..11011,11123..11271,11370..11456,11561..11767,11794..12122,12236..12291,12369..12487,12656..12734,12839..12915,13031..13097,13170..13240,13312..13425,13520..13612))	Acanthamoeba castellanii str. Neff	14912519
ACA1_353200	CDS	ACA1_353200	NW_004457280.1	13720	14598	D	encoded by transcript ACA1_353200A; uncharacterized protein	join(13720..13812,13913..13956,14024..14072,14312..14410,14473..14598)	Acanthamoeba castellanii str. Neff	14912520
ACA1_353210	CDS	ACA1_353210	NW_004457280.1	15009	16814	R	encoded by transcript ACA1_353210A; uncharacterized protein	complement(join(15009..15118,15182..15406,15542..15779,15825..16076,16148..16322,16449..16576,16728..16814))	Acanthamoeba castellanii str. Neff	14912521
ACA1_353220	CDS	ACA1_353220	NW_004457280.1	16836	17826	R	encoded by transcript ACA1_353220A; uncharacterized protein	complement(join(16836..16945,17003..17096,17173..17444,17808..17826))	Acanthamoeba castellanii str. Neff	14912507
ACA1_353230	CDS	ACA1_353230	NW_004457280.1	21665	24499	R	encoded by transcript ACA1_353230A; integrase core domain containing protein	complement(join(21665..22154,22209..22354,22412..22855,22901..24131,24156..24499))	Acanthamoeba castellanii str. Neff	14912508
ACA1_353340	CDS	ACA1_353340	NW_004457280.1	25325	25927	R	encoded by transcript ACA1_353340A; uncharacterized protein	complement(25325..25927)	Acanthamoeba castellanii str. Neff	14912509
ACA1_353350	CDS	ACA1_353350	NW_004457280.1	27380	28799	D	encoded by transcript ACA1_353350A; uncharacterized protein	join(27380..27406,27470..27994,28133..28318,28401..28799)	Acanthamoeba castellanii str. Neff	14912510
ACA1_353460	CDS	ACA1_353460	NW_004457280.1	29150	32904	D	encoded by transcript ACA1_353460A; acyl-CoA dehydrogenase, middle domain containing protein	join(29150..29257,29416..29501,29568..29643,29730..29791,29874..29922,30050..30177,30277..30387,30480..30573,32069..32095,32172..32430,32549..32696,32742..32904)	Acanthamoeba castellanii str. Neff	14912511
ACA1_353570	CDS	ACA1_353570	NW_004457280.1	33405	36320	D	encoded by transcript ACA1_353570A; uncharacterized protein	join(33405..33417,33638..34895,35043..35133,35222..35304,35407..35521,35649..35733,35842..36320)	Acanthamoeba castellanii str. Neff	14912512
ACA1_353580	CDS	ACA1_353580	NW_004457280.1	36635	38640	R	encoded by transcript ACA1_353580A; ROK family protein, putative	complement(join(36635..36666,36681..36791,36906..36981,37057..37162,37261..37313,37495..37573,37650..37751,37852..37910,38014..38098,38200..38294,38372..38474,38591..38640))	Acanthamoeba castellanii str. Neff	14912513
ACA1_353600	CDS	ACA1_353600	NW_004457280.1	43100	44136	R	encoded by transcript ACA1_353600A; zetacop, subunit of COP-I complex, putative	complement(join(43100..43271,43355..43432,43512..43627,43704..43735,43819..43969,44116..44136))	Acanthamoeba castellanii str. Neff	14912504
ACA1_353610	CDS	ACA1_353610	NW_004457280.1	44411	46290	D	encoded by transcript ACA1_353610A; methyltransferase, YaeB/AF_0241 family protein, putative	join(44411..44501,44661..44787,44862..45002,45219..45328,45471..45605,45688..45776,45886..46290)	Acanthamoeba castellanii str. Neff	14912514
ACA1_353620	CDS	ACA1_353620	NW_004457280.1	46361	50760	R	encoded by transcript ACA1_353620A; RhoGAP domain containing protein	complement(join(46361..46515,46617..46741,46846..46922,47020..47347,47461..47520,47656..47727,47862..47905,48025..48134,48224..48296,48421..48539,48688..49263,49366..49509,49588..49644,49891..50052,50160..50266,50359..50466,50744..50760))	Acanthamoeba castellanii str. Neff	14912515
ACA1_353630	CDS	ACA1_353630	NW_004457280.1	51717	53278	D	encoded by transcript ACA1_353630A; SAC domain containing protein 9, putative	join(51717..51759,51854..51953,52357..52449,52568..52681,52910..52995,53085..53278)	Acanthamoeba castellanii str. Neff	14912516
ACA1_353640	CDS	ACA1_353640	NW_004457280.1	53373	60254	D	encoded by transcript ACA1_353640A; uncharacterized protein	join(53373..53381,53528..53607,53703..53802,53862..54037,54120..54334,54482..54544,54614..54709,54810..54922,55010..55089,55163..55289,55379..55441,55577..55704,55795..55910,56005..56138,56306..56518,56608..56717,56845..56927,57068..57158,57269..57405,57427..57433,57568..57779,57871..57917,57994..58062,58152..58247,58345..58425,58533..58757,58886..59662,59742..60254)	Acanthamoeba castellanii str. Neff	14912505
ACA1_353650	CDS	ACA1_353650	NW_004457280.1	60711	62885	D	encoded by transcript ACA1_353650A; calponin domain containing protein	join(60711..60860,60891..61021,61102..61219,61305..61374,61464..61565,61647..61749,61837..61977,62068..62215,62335..62456,62532..62553,62661..>62885)	Acanthamoeba castellanii str. Neff	14912506
ACA1_353760	CDS	ACA1_353760	NW_004457280.1	67073	67568	R	encoded by transcript ACA1_353760A; uncharacterized protein	complement(join(67073..67231,67362..67469,67554..67568))	Acanthamoeba castellanii str. Neff	14912517
ACA1_353770	CDS	ACA1_353770	NW_004457280.1	69215	70593	D	encoded by transcript ACA1_353770A; uncharacterized protein	join(69215..69309,69388..69488,69565..69711,70134..70265,70347..70433,70518..>70593)	Acanthamoeba castellanii str. Neff	14912518
ACA1_353880	CDS	ACA1_353880	NW_004457280.1	75648	76460	D	encoded by transcript ACA1_353880A; uncharacterized protein	join(75648..75861,75919..75961,76060..76240,76317..>76460)	Acanthamoeba castellanii str. Neff	14912525
ACA1_014980	CDS	ACA1_014980	NW_004457279.1	109	1344	D	encoded by transcript ACA1_014980A; uncharacterized protein	join(109..127,197..480,565..640,698..842,912..1008,1093..1344)	Acanthamoeba castellanii str. Neff	14912500
ACA1_014990	CDS	ACA1_014990	NW_004457279.1	1656	3759	D	encoded by transcript ACA1_014990A; uncharacterized protein	join(1656..1682,1843..2469,2549..2697,2794..2953,3037..3234,3314..3496,3580..>3759)	Acanthamoeba castellanii str. Neff	14912501
ACA1_015100	CDS	ACA1_015100	NW_004457279.1	6113	6829	D	encoded by transcript ACA1_015100A; myotubularin family protein	join(<6113..6258,6350..6488,6600..6758,6770..6829)	Acanthamoeba castellanii str. Neff	14912502
ACA1_015210	CDS	ACA1_015210	NW_004457279.1	9087	10613	R	encoded by transcript ACA1_015210A; MYND finger domain containing protein	complement(join(9087..9413,9497..9601,9679..10085,10195..10273,10344..10452,10576..10613))	Acanthamoeba castellanii str. Neff	14912499
ACA1_117450	CDS	ACA1_117450	NW_004457278.1	49	802	D	encoded by transcript ACA1_117450A; ankyrin repeat-containing protein	join(49..176,256..394,476..>802)	Acanthamoeba castellanii str. Neff	14912496
ACA1_117560	CDS	ACA1_117560	NW_004457278.1	4040	5408	D	encoded by transcript ACA1_117560A; NAD(+) ADP-ribosyltransferase	join(<4040..4429,4528..4833,4941..5077,5176..5292,5369..>5408)	Acanthamoeba castellanii str. Neff	14912497
ACA1_117680	CDS	ACA1_117680	NW_004457278.1	6367	6725	R	encoded by transcript ACA1_117680A; SAM domain (Sterile alpha motif) domain containing protein	complement(<6367..6725)	Acanthamoeba castellanii str. Neff	14912498
ACA1_321160	CDS	ACA1_321160	NW_004457277.1	350	2345	R	encoded by transcript ACA1_321160A; oxidoreductase, FADbinding domain containing protein	complement(join(350..565,658..842,936..1092,1220..1283,1384..1528,1662..1881,1968..2086,2264..2345))	Acanthamoeba castellanii str. Neff	14912493
ACA1_321170	CDS	ACA1_321170	NW_004457277.1	2488	3196	D	encoded by transcript ACA1_321170A; uncharacterized protein	join(2488..2653,2720..3037,3099..3196)	Acanthamoeba castellanii str. Neff	14912491
ACA1_321180	CDS	ACA1_321180	NW_004457277.1	3513	8006	D	encoded by transcript ACA1_321180A; PH domain containing protein	join(3513..4604,4723..4770,4870..5043,5219..5342,5449..5543,5670..5861,5999..6463,6612..6800,6901..7083,7176..7343,7448..7646,7750..8006)	Acanthamoeba castellanii str. Neff	14912494
ACA1_321190	CDS	ACA1_321190	NW_004457277.1	9244	10447	R	encoded by transcript ACA1_321190A; Adaptin earbinding coat-associated protein 2 (NECAP-2) isoform 2, putative	complement(join(9244..9314,9440..9524,9663..9774,9861..9948,10025..10123,10258..10447))	Acanthamoeba castellanii str. Neff	14912489
ACA1_321200	CDS	ACA1_321200	NW_004457277.1	10664	11134	D	encoded by transcript ACA1_321200A; uncharacterized protein	10664..11134	Acanthamoeba castellanii str. Neff	14912490
ACA1_321210	CDS	ACA1_321210	NW_004457277.1	11449	14151	R	encoded by transcript ACA1_321210A; alphaactinin, putative	complement(join(11449..11538,11621..11781,11872..11978,12049..12454,12537..12800,12871..12985,13124..13351,13450..13651,13732..13813,13911..14151))	Acanthamoeba castellanii str. Neff	14912495
ACA1_321220	CDS	ACA1_321220	NW_004457277.1	14878	15871	D	encoded by transcript ACA1_321220A; MEKK and related serine/threonine protein kinase, putative	join(14878..15153,15459..15593,15695..>15871)	Acanthamoeba castellanii str. Neff	14912492
ACA1_011040	CDS	ACA1_011040	NW_004457276.1	356	1121	R	encoded by transcript ACA1_011040A; uncharacterized protein	complement(join(356..379,490..677,977..1121))	Acanthamoeba castellanii str. Neff	14912488
ACA1_011150	CDS	ACA1_011150	NW_004457276.1	7386	9176	R	encoded by transcript ACA1_011150A; eIF4gamma/eIF5/eIF2-epsilon domain containing protein	complement(join(7386..7429,7456..7471,7544..7753,7825..7963,8152..8415,8502..8576,8659..8841,8906..9030,9093..9176))	Acanthamoeba castellanii str. Neff	14912486
ACA1_011160	CDS	ACA1_011160	NW_004457276.1	9525	10657	D	encoded by transcript ACA1_011160A; replication protein A2 family protein, putative	join(9525..9788,9853..9992,10080..10239,10325..10657)	Acanthamoeba castellanii str. Neff	14912487
ACA1_314000	CDS	ACA1_314000	NW_004457275.1	751	1815	D	encoded by transcript ACA1_314000A; ATP synthase F1, gamma subunit	join(751..836,908..964,1056..1815)	Acanthamoeba castellanii str. Neff	14912483
ACA1_314110	CDS	ACA1_314110	NW_004457275.1	2396	3390	R	encoded by transcript ACA1_314110A; uncharacterized protein	complement(join(2396..2445,2486..2767,2856..2934,2994..3057,3129..3203,3284..>3390))	Acanthamoeba castellanii str. Neff	14912482
ACA1_314220	CDS	ACA1_314220	NW_004457275.1	8773	9257	R	encoded by transcript ACA1_314220A; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase	complement(join(8773..9014,9125..9190,9251..9257))	Acanthamoeba castellanii str. Neff	14912484
ACA1_314230	CDS	ACA1_314230	NW_004457275.1	9557	11935	R	encoded by transcript ACA1_314230A; Myblike DNA binding protein, putative	complement(join(9557..11017,11093..11935))	Acanthamoeba castellanii str. Neff	14912485
ACA1_344580	CDS	ACA1_344580	NW_004457274.1	56	2938	R	encoded by transcript ACA1_344580A; FRAP subfamily protein kinase	complement(join(<56..129,232..380,474..579,722..780,862..992,1082..1200,1307..1453,1539..1633,1723..1894,1965..2150,2236..2309,2367..2433,2527..2764,2856..2938))	Acanthamoeba castellanii str. Neff	14912479
ACA1_344690	CDS	ACA1_344690	NW_004457274.1	6879	9117	D	encoded by transcript ACA1_344690A; uncharacterized protein	join(<6879..6947,7013..7168,7284..7373,7448..7543,7614..7704,7889..7990,8087..8153,8234..8330,8454..8522,8568..8637,8750..8792,8949..9117)	Acanthamoeba castellanii str. Neff	14912478
ACA1_344900	CDS	ACA1_344900	NW_004457274.1	14572	19489	D	encoded by transcript ACA1_344900A; ABC-type branched-chain amino acid transport system, periplasmic component protein	join(14572..14923,15013..15097,15172..15340,15444..15560,15628..15712,15811..15896,16003..16074,16132..16226,16305..16452,16574..16897,16971..17034,17128..17534,17604..17697,17804..17862,17954..18087,18175..18297,18427..18529,18659..18776,18898..19023,19106..19291,19350..19489)	Acanthamoeba castellanii str. Neff	14912481
ACA1_344910	CDS	ACA1_344910	NW_004457274.1	19923	20315	R	encoded by transcript ACA1_344910A; glutathione Stransferase	complement(19923..20315)	Acanthamoeba castellanii str. Neff	14912480
ACA1_151500	CDS	ACA1_151500	NW_004457273.1	45	1178	D	encoded by transcript ACA1_151500A; Ras subfamily protein	join(45..73,142..222,323..446,533..681,757..849,920..1178)	Acanthamoeba castellanii str. Neff	14912473
ACA1_151510	CDS	ACA1_151510	NW_004457273.1	1782	1970	D	encoded by transcript ACA1_151510A; uncharacterized protein	1782..1970	Acanthamoeba castellanii str. Neff	14912472
ACA1_151920	CDS	ACA1_151920	NW_004457273.1	11535	12950	D	encoded by transcript ACA1_151920A; uncharacterized protein	join(11535..11541,11792..11920,12697..12950)	Acanthamoeba castellanii str. Neff	14912469
ACA1_151930	CDS	ACA1_151930	NW_004457273.1	20028	21816	R	encoded by transcript ACA1_151930A; Ras subfamily protein	complement(join(20028..20295,20380..20469,20560..20811,20908..20958,21255..21343,21414..21476,21733..21816))	Acanthamoeba castellanii str. Neff	14912477
ACA1_151940	CDS	ACA1_151940	NW_004457273.1	22232	22622	D	encoded by transcript ACA1_151940A; uncharacterized protein	join(22232..22362,22415..22622)	Acanthamoeba castellanii str. Neff	14912467
ACA1_151950	CDS	ACA1_151950	NW_004457273.1	23346	24141	R	encoded by transcript ACA1_151950A; Reverse transcriptase (RNAdependent DNA polymerase)	complement(join(23346..23367,23396..24141))	Acanthamoeba castellanii str. Neff	14912468
ACA1_151970	CDS	ACA1_151970	NW_004457273.1	28445	29790	D	encoded by transcript ACA1_151970A; Fbox domain containing protein	join(28445..29191,29251..29790)	Acanthamoeba castellanii str. Neff	14912475
ACA1_151980	CDS	ACA1_151980	NW_004457273.1	29822	30589	D	encoded by transcript ACA1_151980A; uncharacterized protein	join(29822..29896,29920..29970,30341..30589)	Acanthamoeba castellanii str. Neff	14912476
ACA1_152090	CDS	ACA1_152090	NW_004457273.1	30749	31209	D	encoded by transcript ACA1_152090A; uncharacterized protein	join(30749..30781,30885..31189,31200..31209)	Acanthamoeba castellanii str. Neff	14912470
ACA1_152200	CDS	ACA1_152200	NW_004457273.1	32914	34604	R	encoded by transcript ACA1_152200A; Ras subfamily protein	complement(join(32914..33120,33235..33464,33509..33629,33858..34064,34153..34268,34410..34452,34566..34604))	Acanthamoeba castellanii str. Neff	14912471
ACA1_318650	CDS	ACA1_318650	NW_004457272.1	75	1742	R	encoded by transcript ACA1_318650A; uncharacterized protein	complement(join(<75..232,358..585,710..890,1128..1518,1663..1742))	Acanthamoeba castellanii str. Neff	14912466
ACA1_318660	CDS	ACA1_318660	NW_004457272.1	2200	6078	D	encoded by transcript ACA1_318660A; uncharacterized protein	2200..6078	Acanthamoeba castellanii str. Neff	14912464
ACA1_318670	CDS	ACA1_318670	NW_004457272.1	6689	10765	D	encoded by transcript ACA1_318670A; EGFlike domain containing protein	join(6689..7081,7174..7293,7451..7676,7891..8053,8125..8578,8762..9070,9178..9391,9547..9783,9975..>10765)	Acanthamoeba castellanii str. Neff	14912465
ACA1_399470	CDS	ACA1_399470	NW_004457271.1	9658	11839	R	encoded by transcript ACA1_399470A; uncharacterized protein	complement(join(9658..9666,9719..9865,9949..9985,10099..10141,10353..10573,10700..10745,10858..10920,11007..11428,11465..11500,11583..11632,11723..11839))	Acanthamoeba castellanii str. Neff	14912421
ACA1_399480	CDS	ACA1_399480	NW_004457271.1	13221	14342	R	encoded by transcript ACA1_399480A; glycoside hydrolase family protein	complement(join(13221..13983,14119..14342))	Acanthamoeba castellanii str. Neff	14912422
ACA1_399490	CDS	ACA1_399490	NW_004457271.1	14545	18582	R	encoded by transcript ACA1_399490A; zinc finger domain containing protein	complement(join(14545..15150,15397..15470,15542..15762,16218..16755,16820..16971,17068..17160,17245..17324,17475..17680,17758..17869,17944..18582))	Acanthamoeba castellanii str. Neff	14912438
ACA1_399600	CDS	ACA1_399600	NW_004457271.1	19517	20533	R	encoded by transcript ACA1_399600A; uncharacterized protein	complement(19517..20533)	Acanthamoeba castellanii str. Neff	14912439
ACA1_399610	CDS	ACA1_399610	NW_004457271.1	20877	21775	R	encoded by transcript ACA1_399610A; uncharacterized protein	complement(join(20877..21263,21335..21775))	Acanthamoeba castellanii str. Neff	14912444
ACA1_399620	CDS	ACA1_399620	NW_004457271.1	22096	23126	D	encoded by transcript ACA1_399620A; Ctr copper transporter family protein	join(22096..22150,22277..22372,22520..22717,23056..23126)	Acanthamoeba castellanii str. Neff	14912431
ACA1_399730	CDS	ACA1_399730	NW_004457271.1	23382	25542	D	encoded by transcript ACA1_399730A; uncharacterized protein	join(23382..23971,24060..24223,24342..24448,24527..24663,24746..24883,24959..25319,25399..25542)	Acanthamoeba castellanii str. Neff	14912432
ACA1_399740	CDS	ACA1_399740	NW_004457271.1	26252	26967	R	encoded by transcript ACA1_399740A; Raslike protein rasG, putative	complement(join(26252..26690,26774..26967))	Acanthamoeba castellanii str. Neff	14912396
ACA1_399750	CDS	ACA1_399750	NW_004457271.1	27250	29598	D	encoded by transcript ACA1_399750A; Carboxypeptidase A1, putative	join(27250..27588,27780..27881,27991..28057,28172..28278,28451..28563,28675..28790,28860..28972,29073..29136,29240..29392,29495..29598)	Acanthamoeba castellanii str. Neff	14912397
ACA1_399770	CDS	ACA1_399770	NW_004457271.1	31559	34512	D	encoded by transcript ACA1_399770A; Poly(ADP-ribose) polymerase catalytic domain containing protein	join(31559..31627,31704..31870,31900..31941,32078..32375,32398..32808,32893..33307,33437..33586,33649..33777,33858..34007,34119..34177,34297..34512)	Acanthamoeba castellanii str. Neff	14912416
ACA1_399780	CDS	ACA1_399780	NW_004457271.1	34644	35300	R	encoded by transcript ACA1_399780A; stress responsive alphabeta barrel domain protein	complement(join(34644..34807,34890..35019,35095..35172,35229..35300))	Acanthamoeba castellanii str. Neff	14912417
ACA1_399790	CDS	ACA1_399790	NW_004457271.1	35610	41266	R	encoded by transcript ACA1_399790A; Lecithin:cholesterol acyltransferase	complement(join(35610..35698,35807..35968,36077..36200,36294..36382,36452..36527,36626..36886,37014..37119,37239..37345,37440..37535,37625..37690,37782..37850,37931..38035,38131..38268,38387..38444,38554..38656,38824..39006,39111..39240,39358..39484,39580..39713,39833..39961,40069..40153,40262..40385,40474..40534,40690..40860,41008..41084,41194..41266))	Acanthamoeba castellanii str. Neff	14912386
ACA1_399800	CDS	ACA1_399800	NW_004457271.1	41783	42466	D	encoded by transcript ACA1_399800A; cyst specific protein CSP 21, putative	join(41783..42073,42174..42310,42373..42466)	Acanthamoeba castellanii str. Neff	14912440
ACA1_399810	CDS	ACA1_399810	NW_004457271.1	42587	42929	R	encoded by transcript ACA1_399810A; uncharacterized protein	complement(join(42587..42753,42848..42929))	Acanthamoeba castellanii str. Neff	14912418
ACA1_399820	CDS	ACA1_399820	NW_004457271.1	43074	43972	D	encoded by transcript ACA1_399820A; vSNARE family protein	join(43074..43297,43355..43490,43596..43730,43808..43972)	Acanthamoeba castellanii str. Neff	14912419
ACA1_399830	CDS	ACA1_399830	NW_004457271.1	44094	45654	R	encoded by transcript ACA1_399830A; uncharacterized protein	complement(join(44094..44195,44268..44406,44480..44616,44682..44748,44831..44919,44996..45088,45157..45251,45336..45654))	Acanthamoeba castellanii str. Neff	14912402
ACA1_399840	CDS	ACA1_399840	NW_004457271.1	45730	46383	R	encoded by transcript ACA1_399840A; uncharacterized protein	complement(45730..46383)	Acanthamoeba castellanii str. Neff	14912403
ACA1_399850	CDS	ACA1_399850	NW_004457271.1	46646	47883	R	encoded by transcript ACA1_399850A; Ras family protein	complement(join(46646..46735,46815..46870,46938..47055,47138..47209,47293..47377,47457..47490,47566..47754,47841..47883))	Acanthamoeba castellanii str. Neff	14912389
ACA1_399860	CDS	ACA1_399860	NW_004457271.1	48169	51575	D	encoded by transcript ACA1_399860A; Filamin repeat domain containing protein	join(48169..48291,48359..48840,48922..49042,49107..49257,49324..49442,49512..49625,49691..49840,49915..49974,50039..50180,50243..50332,50400..50526,50588..50704,50764..50857,50928..51048,51114..51204,51274..51342,51416..51575)	Acanthamoeba castellanii str. Neff	14912390
ACA1_399870	CDS	ACA1_399870	NW_004457271.1	52216	54112	D	encoded by transcript ACA1_399870A; integral membrane protein duf6 domain containing protein	join(52216..52341,52574..52641,52750..52828,52960..53009,53086..53213,53298..53374,53460..53496,53576..53680,53761..53873,53960..54112)	Acanthamoeba castellanii str. Neff	14912405
ACA1_399880	CDS	ACA1_399880	NW_004457271.1	54579	58430	D	encoded by transcript ACA1_399880A; TBC domain containing protein	join(54579..54675,54727..54785,54870..55058,55182..55516,55597..55725,55836..56003,56115..56220,56318..56360,56440..56568,56820..56902,56990..57090,57155..57317,57401..57540,57630..57702,57796..57894,57993..58072,58208..58262,58353..58430)	Acanthamoeba castellanii str. Neff	14912445
ACA1_399890	CDS	ACA1_399890	NW_004457271.1	58685	59197	D	encoded by transcript ACA1_399890A; uncharacterized protein	join(58685..58825,58856..59197)	Acanthamoeba castellanii str. Neff	14912446
ACA1_399900	CDS	ACA1_399900	NW_004457271.1	59275	59793	R	encoded by transcript ACA1_399900A; universal stress domain containing protein	complement(join(59275..59344,59419..59540,59614..59793))	Acanthamoeba castellanii str. Neff	14912451
ACA1_399920	CDS	ACA1_399920	NW_004457271.1	63378	65414	R	encoded by transcript ACA1_399920A; MAP kinseERK kinase	complement(join(63378..63467,63551..63596,63669..63763,63847..63966,64062..64170,64265..64338,64488..64592,64688..64801,64952..65114,65311..65414))	Acanthamoeba castellanii str. Neff	14912462
ACA1_399930	CDS	ACA1_399930	NW_004457271.1	66651	70627	D	encoded by transcript ACA1_399930A; Ras subfamily protein	join(66651..66671,66829..66929,67157..67294,67423..67494,67570..67636,67721..67906,68029..68133,68217..68256,68309..68592,68864..69381,69455..69701,69850..69976,70069..70212,70323..70426,70538..70627)	Acanthamoeba castellanii str. Neff	14912463
ACA1_399940	CDS	ACA1_399940	NW_004457271.1	72311	80646	R	encoded by transcript ACA1_399940A; uncharacterized protein	complement(join(72311..72496,72580..72739,72888..72988,73078..73177,73263..73439,73634..73787,73921..73982,74124..74197,74344..74569,74656..74914,75014..75276,75345..75445,75569..75833,75990..76026,76164..76590,76626..76821,76964..77209,77348..77407,77494..77674,77785..77864,77941..79028,79097..79294,79391..80154,80238..80380,80498..80646))	Acanthamoeba castellanii str. Neff	14912420
ACA1_399950	CDS	ACA1_399950	NW_004457271.1	80974	81789	D	encoded by transcript ACA1_399950A; ribosomal protein L21, putative	join(80974..81298,81404..81789)	Acanthamoeba castellanii str. Neff	14912398
ACA1_399960	CDS	ACA1_399960	NW_004457271.1	81947	83569	R	encoded by transcript ACA1_399960A; WD repeatcontaining protein JIP5, putative	complement(join(81947..82256,82355..82524,82616..82715,82791..82967,83194..83319,83379..83569))	Acanthamoeba castellanii str. Neff	14912399
ACA1_399970	CDS	ACA1_399970	NW_004457271.1	83972	87236	D	encoded by transcript ACA1_399970A; WD domain, Gbeta repeat-containing protein	join(83972..84122,84191..84938,85036..85131,85200..85493,85576..86069,86148..86354,86440..86576,86654..86755,86846..86911,86985..87236)	Acanthamoeba castellanii str. Neff	14912400
ACA1_400010	CDS	ACA1_400010	NW_004457271.1	94037	95056	D	encoded by transcript ACA1_400010A; betalactamase	94037..95056	Acanthamoeba castellanii str. Neff	14912459
ACA1_400020	CDS	ACA1_400020	NW_004457271.1	95151	100525	R	encoded by transcript ACA1_400020A; pyridoxaldependent decarboxylase conserved domain containing protein	complement(join(95151..95247,95342..95521,95607..95728,95826..95969,96075..96278,96369..96463,96542..96695,96837..96929,97020..97144,97299..97394,97508..97622,97930..98040,98133..98276,98421..98624,98948..99042,99120..99273,99401..99493,99586..99710,99862..99957,100074..100199,100444..100525))	Acanthamoeba castellanii str. Neff	14912460
ACA1_400130	CDS	ACA1_400130	NW_004457271.1	101635	102414	D	encoded by transcript ACA1_400130A; uncharacterized protein	join(101635..101877,101975..102034,102082..102414)	Acanthamoeba castellanii str. Neff	14912447
ACA1_400160	CDS	ACA1_400160	NW_004457271.1	109713	110865	R	encoded by transcript ACA1_400160A; ubiquitin domain containing protein	complement(join(109713..109852,109961..110030,110091..110183,110277..110463,110562..110674,110767..110865))	Acanthamoeba castellanii str. Neff	14912413
ACA1_400170	CDS	ACA1_400170	NW_004457271.1	111019	112644	D	encoded by transcript ACA1_400170A; WD domain, Gbeta repeat-containing protein	join(111019..111876,111979..112381,112472..112644)	Acanthamoeba castellanii str. Neff	14912414
ACA1_400180	CDS	ACA1_400180	NW_004457271.1	112718	114231	R	encoded by transcript ACA1_400180A; haloacid dehalogenaselike hydrolase domain containing protein	complement(join(112718..112794,112863..112912,112998..113071,113148..113198,113290..113412,113489..113776,113881..114231))	Acanthamoeba castellanii str. Neff	14912423
ACA1_400190	CDS	ACA1_400190	NW_004457271.1	114341	115101	D	encoded by transcript ACA1_400190A; EF hand domain containing protein	join(114341..114442,114533..114606,114684..114760,114893..115101)	Acanthamoeba castellanii str. Neff	14912424
ACA1_400200	CDS	ACA1_400200	NW_004457271.1	116212	117726	R	encoded by transcript ACA1_400200A; Porphyromonastype peptidyl-arginine deiminase subfamily protein	complement(join(116212..116730,116836..116877,116970..117203,117223..117726))	Acanthamoeba castellanii str. Neff	14912425
ACA1_400210	CDS	ACA1_400210	NW_004457271.1	119028	121216	R	encoded by transcript ACA1_400210A; PHprotein kinase domain containing protein	complement(join(119028..119182,119266..119434,119528..119579,119669..119960,120129..120248,120334..120510,120607..120658,120910..121154,121186..121216))	Acanthamoeba castellanii str. Neff	14912392
ACA1_400220	CDS	ACA1_400220	NW_004457271.1	121589	122732	R	encoded by transcript ACA1_400220A; lysophospholipase	complement(join(121589..121725,121849..121956,122033..122121,122288..122387,122478..122596,122680..122732))	Acanthamoeba castellanii str. Neff	14912393
ACA1_400230	CDS	ACA1_400230	NW_004457271.1	123225	126119	R	encoded by transcript ACA1_400230A; SH2 domain containing protein	complement(join(123225..123387,123467..123583,123723..123806,123894..124035,124128..124302,124396..124481,124594..124693,124813..124982,125053..125302,125436..125549,125674..125829,125961..126119))	Acanthamoeba castellanii str. Neff	14912406
ACA1_400240	CDS	ACA1_400240	NW_004457271.1	126804	128563	R	encoded by transcript ACA1_400240A; calponin domain containing protein	complement(join(126804..128166,128259..128563))	Acanthamoeba castellanii str. Neff	14912407
ACA1_400250	CDS	ACA1_400250	NW_004457271.1	130424	131058	R	encoded by transcript ACA1_400250A; uncharacterized protein	complement(join(130424..130856,130898..131058))	Acanthamoeba castellanii str. Neff	14912436
ACA1_400260	CDS	ACA1_400260	NW_004457271.1	131228	131994	D	encoded by transcript ACA1_400260A; ranlike small GTPase	join(131228..131345,131417..131525,131608..131653,131734..131994)	Acanthamoeba castellanii str. Neff	14912437
ACA1_400280	CDS	ACA1_400280	NW_004457271.1	136190	138035	D	encoded by transcript ACA1_400280A; extracellular response kinase, putative	join(136190..136270,136437..136565,136651..136738,136842..136949,137038..137528,137610..137682,137755..138035)	Acanthamoeba castellanii str. Neff	14912442
ACA1_400290	CDS	ACA1_400290	NW_004457271.1	140286	142002	R	encoded by transcript ACA1_400290A; chitinase domain containing protein 1, putative	complement(join(140286..140384,140479..140625,140718..140847,140938..140987,141189..141315,141421..141659,141892..142002))	Acanthamoeba castellanii str. Neff	14912443
ACA1_400300	CDS	ACA1_400300	NW_004457271.1	142572	145206	D	encoded by transcript ACA1_400300A; Ubiquitinconjugating enzyme subfamily protein	join(142572..142648,142730..142790,142877..143230,143477..144005,144088..144444,144515..144626,144714..145206)	Acanthamoeba castellanii str. Neff	14912449
ACA1_400310	CDS	ACA1_400310	NW_004457271.1	145365	147187	R	encoded by transcript ACA1_400310A; uncharacterized protein	complement(join(145365..145500,145583..145982,146072..146201,146299..146427,146514..146627,146772..146947,147016..147187))	Acanthamoeba castellanii str. Neff	14912450
ACA1_400320	CDS	ACA1_400320	NW_004457271.1	147500	159135	D	encoded by transcript ACA1_400320A; protein kinase domain containing protein	join(147500..147526,147702..148823,148959..148992,149085..149197,149271..149399,149501..149716,149817..149897,149995..150256,150333..150490,150579..150728,150859..150931,151033..151178,151251..151294,151383..151452,151533..152966,153043..153316,153403..153490,153571..153729,153816..153910,154007..154078,154183..154361,154475..154569,154669..154792,154925..155893,155975..156499,156604..156844,156974..157136,157231..157347,157466..157686,157860..157986,158106..158203,158303..159135)	Acanthamoeba castellanii str. Neff	14912452
ACA1_400330	CDS	ACA1_400330	NW_004457271.1	159283	163107	R	encoded by transcript ACA1_400330A; HEAT repeat domain containing protein	complement(join(159283..159426,159565..159889,159990..160088,160222..160568,160650..160839,160995..161113,161254..161521,161611..161698,161794..161866,162023..162177,162252..162367,162543..162766,162844..163107))	Acanthamoeba castellanii str. Neff	14912453
ACA1_400350	CDS	ACA1_400350	NW_004457271.1	166938	170392	D	encoded by transcript ACA1_400350A; PH domain containing protein	join(166938..167020,167295..167544,167636..168033,168133..168293,168389..168586,168673..168824,168926..169042,169146..169268,169280..169483,169554..170161,170239..170392)	Acanthamoeba castellanii str. Neff	14912429
ACA1_400360	CDS	ACA1_400360	NW_004457271.1	170603	172777	R	encoded by transcript ACA1_400360A; ATP/GTP nucleotidebinding protein	complement(join(170603..170635,170731..170904,170999..171126,171285..171362,171480..171575,171700..171794,171907..172056,172171..172337,172478..172777))	Acanthamoeba castellanii str. Neff	14912430
ACA1_400370	CDS	ACA1_400370	NW_004457271.1	173216	174851	R	encoded by transcript ACA1_400370A; uncharacterized protein	complement(join(173216..173441,173546..173787,173906..174016,174100..174204,174274..174350,174480..174564,174750..174851))	Acanthamoeba castellanii str. Neff	14912394
ACA1_400380	CDS	ACA1_400380	NW_004457271.1	174952	176767	R	encoded by transcript ACA1_400380A; 3deoxy-7-phosphoheptulonate synthase	complement(join(174952..175185,175323..175466,175556..175707,175794..175956,176052..176103,176179..176308,176402..176584,176698..176767))	Acanthamoeba castellanii str. Neff	14912395
ACA1_400390	CDS	ACA1_400390	NW_004457271.1	177069	180880	R	encoded by transcript ACA1_400390A; alpha amylase, catalytic subfamily protein	complement(join(177069..177854,177941..178247,178343..178489,178567..178708,179308..179449,179552..179691,179765..179904,179982..180074,180212..180273,180367..180552,180746..180880))	Acanthamoeba castellanii str. Neff	14912387
ACA1_400510	CDS	ACA1_400510	NW_004457271.1	183187	183625	D	encoded by transcript ACA1_400510A; uncharacterized protein	join(183187..183313,183399..183625)	Acanthamoeba castellanii str. Neff	14912426
ACA1_400520	CDS	ACA1_400520	NW_004457271.1	183887	184300	D	encoded by transcript ACA1_400520A; uncharacterized protein	join(183887..183992,184062..184300)	Acanthamoeba castellanii str. Neff	14912427
ACA1_400540	CDS	ACA1_400540	NW_004457271.1	186362	187502	R	encoded by transcript ACA1_400540A; sphingosine hydroxylase	complement(join(186362..186593,186706..186829,186956..187301,187410..187502))	Acanthamoeba castellanii str. Neff	14912433
ACA1_400550	CDS	ACA1_400550	NW_004457271.1	188133	189446	R	encoded by transcript ACA1_400550A; tRNA (guanineN1)-methyltransferase	complement(join(188133..188230,188324..188426,188510..188762,188840..188883,189027..189446))	Acanthamoeba castellanii str. Neff	14912434
ACA1_400560	CDS	ACA1_400560	NW_004457271.1	189909	195771	D	encoded by transcript ACA1_400560A; uncharacterized protein	join(189909..190241,190253..190706,190844..191016,191101..191185,191301..191422,191541..191661,191749..191805,191913..192046,192122..192297,192402..192520,192683..192775,192877..192995,193150..193215,193391..193436,193548..193660,193763..193886,193981..194180,194259..194346,194437..194565,194715..194840,195212..195385,195481..195585,195665..195771)	Acanthamoeba castellanii str. Neff	14912435
ACA1_400570	CDS	ACA1_400570	NW_004457271.1	196141	198395	R	encoded by transcript ACA1_400570A; ubiquitin domain containing protein	complement(join(196141..196283,196359..196480,196557..196733,196797..196963,197051..197238,197460..198113,198200..198395))	Acanthamoeba castellanii str. Neff	14912391
ACA1_400580	CDS	ACA1_400580	NW_004457271.1	198557	199854	R	encoded by transcript ACA1_400580A; uncharacterized protein	complement(join(198557..198916,199004..199109,199213..199375,199499..199635,199739..199854))	Acanthamoeba castellanii str. Neff	14912454
ACA1_400590	CDS	ACA1_400590	NW_004457271.1	200275	201363	R	encoded by transcript ACA1_400590A; SEC7like domain containing protein	complement(join(200275..200463,200555..200681,200772..200997,201048..201154,201236..201363))	Acanthamoeba castellanii str. Neff	14912455
ACA1_400800	CDS	ACA1_400800	NW_004457271.1	202786	203565	R	encoded by transcript ACA1_400800A; SEC7/BIG family ARF-guanine nucleotide exchange factor, putative	complement(join(202786..202928,203018..203123,203219..203392,203503..203565))	Acanthamoeba castellanii str. Neff	14912456
ACA1_400910	CDS	ACA1_400910	NW_004457271.1	205312	207476	R	encoded by transcript ACA1_400910A; Sec7 domain containing protein	complement(join(205312..205495,205575..205664,205730..205851,205919..206034,206095..206273,206352..206533,206638..206875,206956..207054,207129..207244,207282..207476))	Acanthamoeba castellanii str. Neff	14912409
ACA1_401020	CDS	ACA1_401020	NW_004457271.1	208914	211193	R	encoded by transcript ACA1_401020A; tetratricopeptide repeat domain protein	complement(join(208914..208997,209089..209283,209368..209511,210417..210494,210570..210812,210886..211119,211170..211193))	Acanthamoeba castellanii str. Neff	14912410
ACA1_401230	CDS	ACA1_401230	NW_004457271.1	211644	212645	R	encoded by transcript ACA1_401230A; uncharacterized protein	complement(join(211644..211811,211871..212067,212546..212645))	Acanthamoeba castellanii str. Neff	14912404
ACA1_272950	CDS	ACA1_272950	NW_004457270.1	33	1398	D	encoded by transcript ACA1_272950A; uncharacterized protein	join(<33..146,293..773,883..986,1065..1141,1245..1398)	Acanthamoeba castellanii str. Neff	14912362
ACA1_272960	CDS	ACA1_272960	NW_004457270.1	1499	5588	R	encoded by transcript ACA1_272960A; GTPase-activator protein for Ras family GTPase	complement(join(1499..1849,1936..2315,2375..2445,2560..2735,2821..2913,3013..3265,3314..3498,3585..3944,4026..4249,4340..4513,4573..4729,4823..4954,5107..5189,5355..5399,5489..5588))	Acanthamoeba castellanii str. Neff	14912354
ACA1_272970	CDS	ACA1_272970	NW_004457270.1	5805	7830	R	encoded by transcript ACA1_272970A; RasGEF domain containing protein	complement(join(5805..6463,6523..6706,6786..6912,7027..7094,7161..7268,7336..7439,7538..7613,7753..7830))	Acanthamoeba castellanii str. Neff	14912355
ACA1_273080	CDS	ACA1_273080	NW_004457270.1	9487	12035	R	encoded by transcript ACA1_273080A; uncharacterized protein	complement(join(9487..9719,9800..9984,10089..10195,10267..10368,10491..10567,10639..10705,10777..10962,11026..11194,11270..11415,11490..11684,11763..11908,11981..12035))	Acanthamoeba castellanii str. Neff	14912377
ACA1_273090	CDS	ACA1_273090	NW_004457270.1	12098	14690	R	encoded by transcript ACA1_273090A; CobW/P47K family domain containing protein	complement(join(12098..12276,12369..12533,12612..12677,12752..12839,12947..13056,13154..13321,13398..13486,13582..13655,13752..13895,14167..14234,14486..14690))	Acanthamoeba castellanii str. Neff	14912310
ACA1_273100	CDS	ACA1_273100	NW_004457270.1	14894	16101	R	encoded by transcript ACA1_273100A; EF hand domain containing protein	complement(join(14894..14993,15091..15170,15263..15333,15416..15444,15520..15591,15661..15716,15776..15834,15954..16101))	Acanthamoeba castellanii str. Neff	14912366
ACA1_273110	CDS	ACA1_273110	NW_004457270.1	16273	17304	D	encoded by transcript ACA1_273110A; uncharacterized protein	join(16273..16458,16552..16644,16719..16755,16775..16903,17090..17304)	Acanthamoeba castellanii str. Neff	14912367
ACA1_273220	CDS	ACA1_273220	NW_004457270.1	19385	20359	D	encoded by transcript ACA1_273220A; uncharacterized protein	19385..20359	Acanthamoeba castellanii str. Neff	14912384
ACA1_273230	CDS	ACA1_273230	NW_004457270.1	21110	21481	R	encoded by transcript ACA1_273230A; uncharacterized protein	complement(21110..>21481)	Acanthamoeba castellanii str. Neff	14912385
ACA1_273340	CDS	ACA1_273340	NW_004457270.1	21627	21845	D	encoded by transcript ACA1_273340A; uncharacterized protein	<21627..21845	Acanthamoeba castellanii str. Neff	14912363
ACA1_273350	CDS	ACA1_273350	NW_004457270.1	22348	22713	R	encoded by transcript ACA1_273350A; uncharacterized protein	complement(22348..>22713)	Acanthamoeba castellanii str. Neff	14912364
ACA1_273460	CDS	ACA1_273460	NW_004457270.1	24315	26682	R	encoded by transcript ACA1_273460A; bacteriorhodopsin subfamily protein	complement(join(<24315..24528,24970..25142,25230..25519,25769..26682))	Acanthamoeba castellanii str. Neff	14912327
ACA1_273470	CDS	ACA1_273470	NW_004457270.1	27037	27457	R	encoded by transcript ACA1_273470A; uncharacterized protein	complement(join(27037..27179,27388..27457))	Acanthamoeba castellanii str. Neff	14912328
ACA1_273480	CDS	ACA1_273480	NW_004457270.1	27677	28066	D	encoded by transcript ACA1_273480A; uncharacterized protein	join(27677..27799,27862..27945,28061..28066)	Acanthamoeba castellanii str. Neff	14912329
ACA1_273490	CDS	ACA1_273490	NW_004457270.1	28884	29937	D	encoded by transcript ACA1_273490A; uncharacterized protein	join(28884..29507,29584..29937)	Acanthamoeba castellanii str. Neff	14912325
ACA1_273500	CDS	ACA1_273500	NW_004457270.1	30166	30999	D	encoded by transcript ACA1_273500A; CBS domain containing protein	join(30166..30294,30442..30646,30764..30999)	Acanthamoeba castellanii str. Neff	14912326
ACA1_273520	CDS	ACA1_273520	NW_004457270.1	34541	44034	D	encoded by transcript ACA1_273520A; SPRY domain containing protein	join(34541..34648,34752..34898,35062..35363,35425..35550,35593..35702,35788..35959,36037..36658,36727..36877,37012..37161,37259..37398,37446..37620,37659..37886,37979..38178,38271..38442,38515..38644,38715..38791,38859..39024,39093..39178,39258..39924,40038..40459,40566..40688,40788..40945,41072..41320,41479..41619,41698..41767,41846..41973,42056..42646,42734..43569,43662..44034)	Acanthamoeba castellanii str. Neff	14912379
ACA1_273530	CDS	ACA1_273530	NW_004457270.1	44946	46952	D	encoded by transcript ACA1_273530A; uncharacterized protein	join(44946..44972,45023..45176,45274..45302,45378..45588,45657..45815,45915..46070,46148..46309,46416..46456,46624..46696,46787..46872,46923..46952)	Acanthamoeba castellanii str. Neff	14912380
ACA1_273540	CDS	ACA1_273540	NW_004457270.1	47138	48595	R	encoded by transcript ACA1_273540A; uncharacterized protein	complement(join(<47138..47487,47567..47750,47877..47998,48139..48369,48493..48595))	Acanthamoeba castellanii str. Neff	14912338
ACA1_273750	CDS	ACA1_273750	NW_004457270.1	48901	50531	D	encoded by transcript ACA1_273750A; protein kinase domain containing protein	join(48901..48928,49016..49101,49180..49342,49366..49489,49558..49790,49865..50438,50477..50531)	Acanthamoeba castellanii str. Neff	14912339
ACA1_273760	CDS	ACA1_273760	NW_004457270.1	51228	52430	R	encoded by transcript ACA1_273760A; uncharacterized protein	complement(join(51228..51872,52004..52226,52306..52430))	Acanthamoeba castellanii str. Neff	14912361
ACA1_273770	CDS	ACA1_273770	NW_004457270.1	52505	53764	R	encoded by transcript ACA1_273770A; uncharacterized protein	complement(join(52505..52999,53075..53224,53290..53430,53492..53764))	Acanthamoeba castellanii str. Neff	14912312
ACA1_273780	CDS	ACA1_273780	NW_004457270.1	53864	57077	R	encoded by transcript ACA1_273780A; GTPase of unknown function subfamily protein	complement(join(53864..54349,54421..54599,54785..54968,55100..55221,55300..55530,55664..55912,56035..56205,56296..56440,56553..56659,56822..56938,57065..57077))	Acanthamoeba castellanii str. Neff	14912313
ACA1_273790	CDS	ACA1_273790	NW_004457270.1	57361	58278	R	encoded by transcript ACA1_273790A; uncharacterized protein	complement(57361..58278)	Acanthamoeba castellanii str. Neff	14912314
ACA1_273800	CDS	ACA1_273800	NW_004457270.1	58791	59469	R	encoded by transcript ACA1_273800A; Hypothetical protein	complement(join(58791..58918,58987..59019,59097..59228,59358..59469))	Acanthamoeba castellanii str. Neff	14912311
ACA1_273810	CDS	ACA1_273810	NW_004457270.1	59662	60691	D	encoded by transcript ACA1_273810A; DNA ligaselike, putative	join(59662..59845,59875..60063,60146..60243,60299..60691)	Acanthamoeba castellanii str. Neff	14912315
ACA1_273820	CDS	ACA1_273820	NW_004457270.1	60737	62730	R	encoded by transcript ACA1_273820A; uncharacterized protein	complement(join(60737..61024,61079..61294,61372..61496,61571..61709,61771..61941,62046..62144,62329..62730))	Acanthamoeba castellanii str. Neff	14912316
ACA1_273830	CDS	ACA1_273830	NW_004457270.1	63306	66855	D	encoded by transcript ACA1_273830A; uncharacterized protein	join(63306..63672,63783..63865,63954..64016,64104..64181,64265..64324,64408..64514,64596..64698,64770..64846,64929..65020,65104..65230,65321..65445,65717..65857,65930..66315,66385..66855)	Acanthamoeba castellanii str. Neff	14912319
ACA1_273840	CDS	ACA1_273840	NW_004457270.1	66984	67373	R	encoded by transcript ACA1_273840A; uncharacterized protein	complement(66984..67373)	Acanthamoeba castellanii str. Neff	14912320
ACA1_273850	CDS	ACA1_273850	NW_004457270.1	67659	69319	D	encoded by transcript ACA1_273850A; uncharacterized protein	join(67659..67765,67879..68012,68090..68215,68319..68441,68592..68711,68787..68954,69072..69319)	Acanthamoeba castellanii str. Neff	14912317
ACA1_273860	CDS	ACA1_273860	NW_004457270.1	69562	72891	D	encoded by transcript ACA1_273860A; phosphatase TPTE gamma isoformphosphatase TPTE gamma isoform, putative	join(69562..69599,69840..69952,70069..70179,70326..70436,70575..70712,70819..70904,70993..71084,71207..71349,71423..71597,71700..72117,72210..72346,72426..72891)	Acanthamoeba castellanii str. Neff	14912318
ACA1_273870	CDS	ACA1_273870	NW_004457270.1	73000	74680	R	encoded by transcript ACA1_273870A; uncharacterized protein	complement(join(73000..73151,73231..73384,73442..73708,73824..73954,74113..74680))	Acanthamoeba castellanii str. Neff	14912340
ACA1_273880	CDS	ACA1_273880	NW_004457270.1	76515	78528	R	encoded by transcript ACA1_273880A; encystationmediating serine proteinase	complement(join(76515..76990,77075..77231,77321..77483,77563..77660,77760..77862,77978..78098,78201..78293,78465..78528))	Acanthamoeba castellanii str. Neff	14912330
ACA1_273890	CDS	ACA1_273890	NW_004457270.1	79167	80746	R	encoded by transcript ACA1_273890A; uncharacterized protein	complement(join(79167..79273,79288..79557,79646..79873,80018..80129,80235..80435,80541..80653,80728..80746))	Acanthamoeba castellanii str. Neff	14912331
ACA1_273900	CDS	ACA1_273900	NW_004457270.1	81039	81723	R	encoded by transcript ACA1_273900A; signal peptide, putative	complement(join(81039..81186,81320..81530,81642..81723))	Acanthamoeba castellanii str. Neff	14912348
ACA1_274030	CDS	ACA1_274030	NW_004457270.1	83724	85457	D	encoded by transcript ACA1_274030A; leucine carboxyl methyl transferase	join(83724..83899,83984..84039,84169..84296,84398..84542,84629..84722,84973..85215,85298..85457)	Acanthamoeba castellanii str. Neff	14912349
ACA1_274140	CDS	ACA1_274140	NW_004457270.1	86497	87403	D	encoded by transcript ACA1_274140A; uncharacterized protein	join(86497..86527,86659..86825,86927..87403)	Acanthamoeba castellanii str. Neff	14912334
ACA1_274150	CDS	ACA1_274150	NW_004457270.1	87795	89276	R	encoded by transcript ACA1_274150A; uncharacterized protein	complement(join(87795..87815,87899..88039,88134..88232,88303..88418,88576..89085,89234..89276))	Acanthamoeba castellanii str. Neff	14912335
ACA1_274160	CDS	ACA1_274160	NW_004457270.1	89523	89933	D	encoded by transcript ACA1_274160A; uncharacterized protein	join(89523..89681,89787..>89933)	Acanthamoeba castellanii str. Neff	14912336
ACA1_274370	CDS	ACA1_274370	NW_004457270.1	93250	95359	D	encoded by transcript ACA1_274370A; ATPase/histidine kinase/DNA gyrase B/HSP90 domain containing protein	join(93250..93337,93419..93649,93732..94197,94278..94449,94537..95041,95136..95359)	Acanthamoeba castellanii str. Neff	14912337
ACA1_274380	CDS	ACA1_274380	NW_004457270.1	95506	98847	R	encoded by transcript ACA1_274380A; protein kinase domain containing protein	complement(join(95506..95721,95815..96064,96163..96689,96735..96799,96903..97600,97684..97785,97863..98080,98155..98271,98345..98452,98512..98614,98696..98847))	Acanthamoeba castellanii str. Neff	14912352
ACA1_274390	CDS	ACA1_274390	NW_004457270.1	99331	101343	D	encoded by transcript ACA1_274390A; RhoGAP domain containing protein	join(99331..99450,99669..99857,99669..99915,100053..100172,100260..100382,100638..100721,100795..100883,101035..101137,101222..101343)	Acanthamoeba castellanii str. Neff	14912353
ACA1_274400	CDS	ACA1_274400	NW_004457270.1	101538	103208	D	encoded by transcript ACA1_274400A; serine-tRNA ligase domain containing protein	join(101538..102500,102663..102850,102980..103208)	Acanthamoeba castellanii str. Neff	14912365
ACA1_274410	CDS	ACA1_274410	NW_004457270.1	103307	104139	D	encoded by transcript ACA1_274410A; uncharacterized protein	join(103307..103464,103585..103651,103822..103940,104034..104139)	Acanthamoeba castellanii str. Neff	14912323
ACA1_274420	CDS	ACA1_274420	NW_004457270.1	104709	105567	D	encoded by transcript ACA1_274420A; MORN repeatcontaining protein	join(104709..105259,105336..105567)	Acanthamoeba castellanii str. Neff	14912324
ACA1_274530	CDS	ACA1_274530	NW_004457270.1	106215	107022	D	encoded by transcript ACA1_274530A; phosphoesterase, PAphosphatase related-family protein	join(106215..106354,106470..106596,106858..107022)	Acanthamoeba castellanii str. Neff	14912321
ACA1_274540	CDS	ACA1_274540	NW_004457270.1	109400	110594	D	encoded by transcript ACA1_274540A; uncharacterized protein	join(<109400..109631,109714..109882,110039..110594)	Acanthamoeba castellanii str. Neff	14912322
ACA1_274560	CDS	ACA1_274560	NW_004457270.1	111464	113212	D	encoded by transcript ACA1_274560A; uncharacterized protein	111464..113212	Acanthamoeba castellanii str. Neff	14912307
ACA1_274570	CDS	ACA1_274570	NW_004457270.1	113850	115920	D	encoded by transcript ACA1_274570A; uncharacterized protein	join(113850..113922,114018..114146,114259..114930,115013..115920)	Acanthamoeba castellanii str. Neff	14912308
ACA1_274580	CDS	ACA1_274580	NW_004457270.1	115992	118069	R	encoded by transcript ACA1_274580A; carrier superfamily protein	complement(join(115992..116049,116165..116274,116462..116582,116687..116788,116867..116931,117036..117107,117272..117337,117406..117538,117630..117724,117743..117768,118042..118069))	Acanthamoeba castellanii str. Neff	14912309
ACA1_274590	CDS	ACA1_274590	NW_004457270.1	118338	118637	D	encoded by transcript ACA1_274590A; uncharacterized protein	118338..118637	Acanthamoeba castellanii str. Neff	14912371
ACA1_274600	CDS	ACA1_274600	NW_004457270.1	118704	119093	D	encoded by transcript ACA1_274600A; uncharacterized protein	118704..119093	Acanthamoeba castellanii str. Neff	14912372
ACA1_274610	CDS	ACA1_274610	NW_004457270.1	119837	121335	D	encoded by transcript ACA1_274610A; transposon Ty3-G Gag-Pol polyprotein-like family protein, putative	join(119837..119998,120045..120114,120129..121018,121114..121335)	Acanthamoeba castellanii str. Neff	14912373
ACA1_274620	CDS	ACA1_274620	NW_004457270.1	121564	121932	D	encoded by transcript ACA1_274620A; uncharacterized protein	121564..121932	Acanthamoeba castellanii str. Neff	14912374
ACA1_274740	CDS	ACA1_274740	NW_004457270.1	123299	123929	R	encoded by transcript ACA1_274740A; uncharacterized protein	complement(join(<123299..123356,123478..123572,123591..123616,123902..>123929))	Acanthamoeba castellanii str. Neff	14912375
ACA1_274750	CDS	ACA1_274750	NW_004457270.1	124338	126346	R	encoded by transcript ACA1_274750A; homeobox domain containing protein	complement(join(124338..125271,125319..126346))	Acanthamoeba castellanii str. Neff	14912376
ACA1_274870	CDS	ACA1_274870	NW_004457270.1	130477	131404	R	encoded by transcript ACA1_274870A; leucine rich repeat domain containing protein	complement(join(130477..130662,130687..130724,130754..130926,131016..131144,131220..131404))	Acanthamoeba castellanii str. Neff	14912350
ACA1_274880	CDS	ACA1_274880	NW_004457270.1	131532	133136	D	encoded by transcript ACA1_274880A; hydrolase, alpha/beta fold domain containing protein	join(131532..131844,131905..131972,132133..132286,132365..132440,132517..132609,132701..132806,132884..132951,133016..133136)	Acanthamoeba castellanii str. Neff	14912351
ACA1_274900	CDS	ACA1_274900	NW_004457270.1	134498	135876	R	encoded by transcript ACA1_274900A; 2,3diketo-5-methylthio-1-phosphopentane phosphatase subfamily protein	complement(join(134498..134696,134784..134883,134976..135189,135294..135398,135495..135572,135656..135770,135845..135876))	Acanthamoeba castellanii str. Neff	14912369
ACA1_274910	CDS	ACA1_274910	NW_004457270.1	136060	139189	R	encoded by transcript ACA1_274910A; uncharacterized protein	complement(join(136060..137685,137735..139189))	Acanthamoeba castellanii str. Neff	14912370
ACA1_274920	CDS	ACA1_274920	NW_004457270.1	140325	142072	D	encoded by transcript ACA1_274920A; PB1 domain containing protein	join(140325..140512,140577..140740,140811..141376,141470..142072)	Acanthamoeba castellanii str. Neff	14912381
ACA1_274930	CDS	ACA1_274930	NW_004457270.1	142193	143557	R	encoded by transcript ACA1_274930A; histone deacetylaserelated, putative	complement(join(142193..142362,142466..142635,142726..142768,142848..142897,143095..143134,143239..143361,143446..143557))	Acanthamoeba castellanii str. Neff	14912382
ACA1_274950	CDS	ACA1_274950	NW_004457270.1	144379	145244	R	encoded by transcript ACA1_274950A; Znfinger in Ran binding protein and others domain containing protein	complement(join(144379..144472,144619..145244))	Acanthamoeba castellanii str. Neff	14912342
ACA1_274960	CDS	ACA1_274960	NW_004457270.1	145714	147973	R	encoded by transcript ACA1_274960A; uncharacterized protein	complement(join(145714..147183,147299..147973))	Acanthamoeba castellanii str. Neff	14912343
ACA1_274970	CDS	ACA1_274970	NW_004457270.1	149112	150812	D	encoded by transcript ACA1_274970A; uncharacterized protein	join(149112..149244,149333..149405,149480..149532,149612..149784,149915..149980,150074..150167,150237..150313,150425..150581,150679..150812)	Acanthamoeba castellanii str. Neff	14912344
ACA1_274980	CDS	ACA1_274980	NW_004457270.1	150865	152748	R	encoded by transcript ACA1_274980A; uncharacterized protein	complement(join(150865..151386,151471..151823,151897..152370,152475..152603,152670..152748))	Acanthamoeba castellanii str. Neff	14912345
ACA1_274990	CDS	ACA1_274990	NW_004457270.1	153227	153886	R	encoded by transcript ACA1_274990A; uncharacterized protein	complement(join(153227..153766,153794..153886))	Acanthamoeba castellanii str. Neff	14912359
ACA1_275000	CDS	ACA1_275000	NW_004457270.1	153989	154291	R	encoded by transcript ACA1_275000A; uncharacterized protein	complement(join(153989..154182,154228..154291))	Acanthamoeba castellanii str. Neff	14912360
ACA1_275010	CDS	ACA1_275010	NW_004457270.1	156159	156999	D	encoded by transcript ACA1_275010A; uncharacterized protein	join(156159..156179,156636..156699,156854..156999)	Acanthamoeba castellanii str. Neff	14912346
ACA1_275020	CDS	ACA1_275020	NW_004457270.1	158012	158299	D	encoded by transcript ACA1_275020A; uncharacterized protein	join(158012..158104,158168..158299)	Acanthamoeba castellanii str. Neff	14912347
ACA1_275030	CDS	ACA1_275030	NW_004457270.1	159546	160352	R	encoded by transcript ACA1_275030A; uncharacterized protein	complement(join(159546..160026,160096..160352))	Acanthamoeba castellanii str. Neff	14912332
ACA1_275040	CDS	ACA1_275040	NW_004457270.1	163000	163852	D	encoded by transcript ACA1_275040A; uncharacterized protein	join(163000..163414,163479..163852)	Acanthamoeba castellanii str. Neff	14912333
ACA1_275160	CDS	ACA1_275160	NW_004457270.1	167261	169193	D	encoded by transcript ACA1_275160A; carrier superfamily protein	join(167261..167317,167455..167628,167796..167937,168069..168321,168442..168538,168635..168700,168836..168950,169066..169193)	Acanthamoeba castellanii str. Neff	14912357
ACA1_275170	CDS	ACA1_275170	NW_004457270.1	169344	169500	R	encoded by transcript ACA1_275170A; Hypothetical protein	complement(<169344..>169500)	Acanthamoeba castellanii str. Neff	14912358
ACA1_275280	CDS	ACA1_275280	NW_004457270.1	172692	173652	R	encoded by transcript ACA1_275280A; Hypothetical protein	complement(join(<172692..172822,172908..173022,173169..173351,173485..>173652))	Acanthamoeba castellanii str. Neff	14912383
ACA1_361660	CDS	ACA1_361660	NW_004457269.1	309	1736	D	encoded by transcript ACA1_361660A; uncharacterized protein	join(<309..522,597..662,770..832,1063..1108,1173..1287,1392..>1736)	Acanthamoeba castellanii str. Neff	14912200
ACA1_361770	CDS	ACA1_361770	NW_004457269.1	7950	9481	D	encoded by transcript ACA1_361770A; uncharacterized protein	join(7950..7958,8006..8208,8288..8465,8556..8681,8750..8845,8946..9096,9201..9317,9399..9481)	Acanthamoeba castellanii str. Neff	14912282
ACA1_361880	CDS	ACA1_361880	NW_004457269.1	14572	15773	R	encoded by transcript ACA1_361880A; uncharacterized protein	complement(join(<14572..14854,15027..15086,15256..15340,15460..15570,15705..15773))	Acanthamoeba castellanii str. Neff	14912264
ACA1_361990	CDS	ACA1_361990	NW_004457269.1	20846	23144	D	encoded by transcript ACA1_361990A; uncharacterized protein	join(20846..20907,21043..21179,21284..21353,21461..21759,21851..22006,22102..22276,22373..22794,22918..23144)	Acanthamoeba castellanii str. Neff	14912266
ACA1_362100	CDS	ACA1_362100	NW_004457269.1	23349	24788	R	encoded by transcript ACA1_362100A; uncharacterized protein	complement(join(23349..23483,23589..23657,23772..23936,24041..24383,24511..24788))	Acanthamoeba castellanii str. Neff	14912202
ACA1_362110	CDS	ACA1_362110	NW_004457269.1	25132	30213	D	encoded by transcript ACA1_362110A; EGFlike domain containing protein	join(25132..25252,25339..25476,25661..25798,25901..26054,26127..26195,26279..26473,26579..26674,26803..26945,27443..27744,27805..27866,27940..28071,28214..28431,28719..28795,29095..29216,29316..29457,29575..29621,29685..30213)	Acanthamoeba castellanii str. Neff	14912273
ACA1_362120	CDS	ACA1_362120	NW_004457269.1	30314	31609	D	encoded by transcript ACA1_362120A; PhzF family phenazine biosynthesis protein	join(30314..30497,30598..30777,30879..30979,31082..31391,31491..31609)	Acanthamoeba castellanii str. Neff	14912274
ACA1_362130	CDS	ACA1_362130	NW_004457269.1	32018	32576	R	encoded by transcript ACA1_362130A; uncharacterized protein	complement(join(32018..32243,32485..32576))	Acanthamoeba castellanii str. Neff	14912271
ACA1_362140	CDS	ACA1_362140	NW_004457269.1	35044	35721	D	encoded by transcript ACA1_362140A; uncharacterized protein	35044..35721	Acanthamoeba castellanii str. Neff	14912272
ACA1_362250	CDS	ACA1_362250	NW_004457269.1	36508	39278	D	encoded by transcript ACA1_362250A; uncharacterized protein	join(36508..36792,36862..36913,37133..37251,37349..39004,39078..39278)	Acanthamoeba castellanii str. Neff	14912215
ACA1_362260	CDS	ACA1_362260	NW_004457269.1	40328	41269	D	encoded by transcript ACA1_362260A; uncharacterized protein	join(40328..40894,40991..41269)	Acanthamoeba castellanii str. Neff	14912216
ACA1_362270	CDS	ACA1_362270	NW_004457269.1	41379	42983	R	encoded by transcript ACA1_362270A; uncharacterized protein	complement(join(41379..42152,42169..42803,42872..42983))	Acanthamoeba castellanii str. Neff	14912305
ACA1_362280	CDS	ACA1_362280	NW_004457269.1	43819	48072	D	encoded by transcript ACA1_362280A; uncharacterized protein	join(43819..44220,44280..44459,44540..45177,45309..45436,45530..45669,45799..46157,46275..46498,46639..46721,46818..46874,46980..47067,47177..48072)	Acanthamoeba castellanii str. Neff	14912306
ACA1_362290	CDS	ACA1_362290	NW_004457269.1	48134	49928	D	encoded by transcript ACA1_362290A; RNA pseudouridine synthase superfamily protein	join(48134..48205,48281..48402,48533..48617,48775..48862,48946..49129,49224..49273,49377..49447,49602..49928)	Acanthamoeba castellanii str. Neff	14912236
ACA1_362300	CDS	ACA1_362300	NW_004457269.1	50525	51214	D	encoded by transcript ACA1_362300A; uncharacterized protein	50525..51214	Acanthamoeba castellanii str. Neff	14912222
ACA1_362430	CDS	ACA1_362430	NW_004457269.1	61986	65918	D	encoded by transcript ACA1_362430A; glycoside hydrolase family 38 protein	join(61986..62003,62140..62282,62347..62457,62568..62719,62808..62869,63068..63236,63338..63403,63482..63670,63745..63823,63918..64042,64144..64229,64297..64403,64533..64654,64720..64780,64876..64957,65033..65118,65186..65267,65356..65412,65543..65705,65833..65918)	Acanthamoeba castellanii str. Neff	14912260
ACA1_362440	CDS	ACA1_362440	NW_004457269.1	66041	70629	R	encoded by transcript ACA1_362440A; uncharacterized protein	complement(join(66041..66472,66543..66630,66701..66792,66869..67007,67086..67257,67393..67525,67722..67810,67963..68218,68414..68537,68635..68663,68750..68834,68911..69018,69141..69182,69254..69326,69563..69730,69847..69940,70032..70487,70564..70629))	Acanthamoeba castellanii str. Neff	14912261
ACA1_362450	CDS	ACA1_362450	NW_004457269.1	71690	73657	D	encoded by transcript ACA1_362450A; uncharacterized protein	join(71690..71864,72116..72285,72352..72696,72819..72932,72993..73172,73232..73252,73400..73454,73479..73657)	Acanthamoeba castellanii str. Neff	14912256
ACA1_362460	CDS	ACA1_362460	NW_004457269.1	74952	75264	D	encoded by transcript ACA1_362460A; uncharacterized protein	join(74952..75115,75180..75264)	Acanthamoeba castellanii str. Neff	14912283
ACA1_362470	CDS	ACA1_362470	NW_004457269.1	75409	76345	D	encoded by transcript ACA1_362470A; uncharacterized protein	join(<75409..75597,75674..75778,75839..76345)	Acanthamoeba castellanii str. Neff	14912243
ACA1_362480	CDS	ACA1_362480	NW_004457269.1	77040	77402	D	encoded by transcript ACA1_362480A; uncharacterized protein	77040..77402	Acanthamoeba castellanii str. Neff	14912262
ACA1_362490	CDS	ACA1_362490	NW_004457269.1	77615	79681	R	encoded by transcript ACA1_362490A; uncharacterized protein	complement(join(77615..77776,77878..78002,78077..78162,78224..78317,78384..78557,78610..78755,78836..79160,79243..79291,79359..79418,79520..79681))	Acanthamoeba castellanii str. Neff	14912263
ACA1_362500	CDS	ACA1_362500	NW_004457269.1	79985	81001	R	encoded by transcript ACA1_362500A; uncharacterized protein	complement(79985..81001)	Acanthamoeba castellanii str. Neff	14912250
ACA1_362510	CDS	ACA1_362510	NW_004457269.1	81499	83031	R	encoded by transcript ACA1_362510A; EF hand domain containing protein	complement(join(81499..81516,81598..81680,81772..81868,81957..82090,82182..82265,82390..82504,82593..82693,82980..83031))	Acanthamoeba castellanii str. Neff	14912203
ACA1_362520	CDS	ACA1_362520	NW_004457269.1	83636	86155	R	encoded by transcript ACA1_362520A; ammonium transporter subfamily protein	complement(join(83636..83714,83812..83913,83999..84112,84205..84353,84420..84582,84659..84810,84887..85034,85100..85349,85415..85520,85611..85692,85784..85877,85963..86155))	Acanthamoeba castellanii str. Neff	14912204
ACA1_362530	CDS	ACA1_362530	NW_004457269.1	86836	89004	R	encoded by transcript ACA1_362530A; ammonium transporter subfamily protein	complement(join(86836..86954,87042..87094,87180..87709,87776..87923,87995..88386,88476..88557,88628..88721,88809..89004))	Acanthamoeba castellanii str. Neff	14912212
ACA1_362540	CDS	ACA1_362540	NW_004457269.1	89444	91565	R	encoded by transcript ACA1_362540A; zinc finger, C3HC4 type (RING finger) domain containing protein	complement(join(89444..89637,89804..89870,89965..90156,90257..90449,90526..90729,90802..91040,91123..91323,91431..91565))	Acanthamoeba castellanii str. Neff	14912254
ACA1_362550	CDS	ACA1_362550	NW_004457269.1	92087	95050	D	encoded by transcript ACA1_362550A; methylmalonatesemialdehyde dehydrogenase (acylating), putative	join(92087..92131,92233..92352,92417..92578,92654..92732,92810..93108,93201..93317,93404..93555,93945..94116,94217..94385,94657..94820,94946..95050)	Acanthamoeba castellanii str. Neff	14912259
ACA1_362560	CDS	ACA1_362560	NW_004457269.1	95917	99749	D	encoded by transcript ACA1_362560A; protein kinase domain containing protein	join(95917..96027,96169..96308,96397..96929,97057..97193,97296..97984,98117..98235,98348..98617,98746..98937,99112..99232,99379..99573,99698..99749)	Acanthamoeba castellanii str. Neff	14912217
ACA1_362570	CDS	ACA1_362570	NW_004457269.1	100130	106111	R	encoded by transcript ACA1_362570A; myosin IF, putative	complement(join(100130..100237,100384..100650,100764..100962,101157..101325,101436..101619,101855..101905,102008..102167,102274..102359,102520..102639,102772..102936,103100..103267,103378..103517,103611..103620,103768..103914,103987..104117,104232..104364,104496..104599,104705..104915,105024..105153,105283..105368,105535..105618,105755..105856,106106..106111))	Acanthamoeba castellanii str. Neff	14912225
ACA1_362580	CDS	ACA1_362580	NW_004457269.1	106509	107092	R	encoded by transcript ACA1_362580A; Cofilin/tropomyosin-type actin-binding protein	complement(join(106509..106610,106687..106933,107016..107092))	Acanthamoeba castellanii str. Neff	14912265
ACA1_362590	CDS	ACA1_362590	NW_004457269.1	107944	109164	R	encoded by transcript ACA1_362590A; glycosyltransferase, group 1 domain containing protein	complement(107944..109164)	Acanthamoeba castellanii str. Neff	14912205
ACA1_362600	CDS	ACA1_362600	NW_004457269.1	109740	110629	D	encoded by transcript ACA1_362600A; uncharacterized protein	join(109740..109839,109906..110081,110142..110270,110315..110629)	Acanthamoeba castellanii str. Neff	14912297
ACA1_362610	CDS	ACA1_362610	NW_004457269.1	110746	114541	R	encoded by transcript ACA1_362610A; leucine rich repeat domain containing protein	complement(join(110746..110870,110989..111793,111918..111998,112142..112238,112357..112422,112520..112600,112680..112748,112813..112881,113003..113071,113250..113522,113599..113667,113747..113818,113918..114107,114310..114397,114521..114541))	Acanthamoeba castellanii str. Neff	14912298
ACA1_362640	CDS	ACA1_362640	NW_004457269.1	121476	122768	D	encoded by transcript ACA1_362640A; Gar1 protein RNA binding region protein	join(121476..121647,121869..122020,122098..122228,122609..122768)	Acanthamoeba castellanii str. Neff	14912245
ACA1_362650	CDS	ACA1_362650	NW_004457269.1	122917	125619	D	encoded by transcript ACA1_362650A; Gpatch domain containing protein	join(122917..122973,123094..123167,123291..123843,123956..124114,124225..124387,124468..124623,124751..124895,124977..125619)	Acanthamoeba castellanii str. Neff	14912246
ACA1_362660	CDS	ACA1_362660	NW_004457269.1	125704	134182	R	encoded by transcript ACA1_362660A; DENN (AEX3) domain containing protein	complement(join(125704..125960,126062..126205,126335..126453,126558..126658,126766..126872,126967..127103,127223..127348,127435..127541,127682..127884,127996..128138,128231..128414,128600..128738,129095..129297,129468..129610,129708..129891,129975..130118,130243..130382,130489..130586,130682..131283,131350..131557,131661..132203,132288..132448,132550..132676,132779..132874,132957..133124,133216..133298,133422..133599,133679..133788,133888..134182))	Acanthamoeba castellanii str. Neff	14912231
ACA1_362670	CDS	ACA1_362670	NW_004457269.1	134503	136610	D	encoded by transcript ACA1_362670A; rieske [2fe2s] domain containing protein	join(134503..134866,134936..135081,135170..135269,135368..135442,135533..135657,135741..135809,135883..135957,136037..136146,136224..136317,136392..136610)	Acanthamoeba castellanii str. Neff	14912284
ACA1_362690	CDS	ACA1_362690	NW_004457269.1	143759	145923	D	encoded by transcript ACA1_362690A; WD domain containing protein	join(143759..143888,144076..144137,144232..144302,144407..144488,144645..144787,144929..145093,145164..145315,145406..145923)	Acanthamoeba castellanii str. Neff	14912213
ACA1_362700	CDS	ACA1_362700	NW_004457269.1	146142	156091	R	encoded by transcript ACA1_362700A; RasGEF domain containing protein	complement(join(146142..146201,146335..146796,146823..147116,147176..147358,147441..147533,147637..147751,147852..147967,148083..148145,148254..148302,148378..148545,148644..148772,148858..149011,149108..149216,149307..149475,149551..149603,149697..149782,149900..150128,150240..150323,150460..150555,150652..150744,150849..150977,151051..151152,151262..151328,151342..151401,151505..151629,151745..151920,151995..152144,152226..152293,152393..152540,152645..152725,152763..152892,152977..153048,153122..153195,153274..153968,154107..154187,154270..154499,154554..154637,154730..154911,154981..155136,155208..155372,155476..155655,155777..155932,156016..156091))	Acanthamoeba castellanii str. Neff	14912214
ACA1_362710	CDS	ACA1_362710	NW_004457269.1	156789	157613	R	encoded by transcript ACA1_362710A; ADPribosylation factor, putative	complement(join(156789..156923,157014..157172,157250..157320,157457..157613))	Acanthamoeba castellanii str. Neff	14912199
ACA1_362720	CDS	ACA1_362720	NW_004457269.1	157937	160356	R	encoded by transcript ACA1_362720A; Ceramidase	complement(join(157937..158037,158122..158460,158524..158650,158692..158789,158889..158987,159109..159129,159197..159310,159371..159505,159627..159751,159842..159973,160095..160188,160266..160356))	Acanthamoeba castellanii str. Neff	14912257
ACA1_362730	CDS	ACA1_362730	NW_004457269.1	160610	161500	R	encoded by transcript ACA1_362730A; ankyrin domain protein	complement(join(160610..160653,160758..160855,160960..161027,161134..161219,161300..161363,161435..161500))	Acanthamoeba castellanii str. Neff	14912285
ACA1_362740	CDS	ACA1_362740	NW_004457269.1	161765	165561	R	encoded by transcript ACA1_362740A; protein kinase domain containing protein	complement(join(161765..161889,161982..162120,162224..162326,162408..162494,162574..162658,162734..162797,162874..162956,163050..163259,163327..163515,163595..163682,163778..164046,164175..164208,164275..164346,164402..164516,164576..164709,164812..165024,165122..165249,165303..165561))	Acanthamoeba castellanii str. Neff	14912280
ACA1_362750	CDS	ACA1_362750	NW_004457269.1	165804	169347	R	encoded by transcript ACA1_362750A; uncharacterized protein	complement(join(165804..166535,166690..166765,166842..166972,167048..167077,167325..167508,167587..167730,167816..167913,168017..168062,168073..168182,168292..168347,168512..168606,168698..169347))	Acanthamoeba castellanii str. Neff	14912281
ACA1_362760	CDS	ACA1_362760	NW_004457269.1	169370	170327	R	encoded by transcript ACA1_362760A; uncharacterized protein	complement(join(169370..169549,169650..169745,169815..169928,170001..170327))	Acanthamoeba castellanii str. Neff	14912201
ACA1_362770	CDS	ACA1_362770	NW_004457269.1	170485	175223	R	encoded by transcript ACA1_362770A; PH domain containing protein	complement(join(170485..170910,171003..171140,171203..171354,171432..171606,171693..171766,171891..171972,172097..172215,172285..172420,172505..172587,172664..172898,172969..173328,173410..173556,173650..173811,173898..173989,174105..174351,174455..174534,174710..175223))	Acanthamoeba castellanii str. Neff	14912220
ACA1_362780	CDS	ACA1_362780	NW_004457269.1	175572	178002	D	encoded by transcript ACA1_362780A; Cofilin/tropomyosin-type actin-binding protein	join(175572..175596,175711..175776,175856..175906,176022..176229,176368..176686,176756..176998,177092..177242,177332..177402,177517..177625,177716..177825,177907..178002)	Acanthamoeba castellanii str. Neff	14912221
ACA1_362790	CDS	ACA1_362790	NW_004457269.1	178149	183563	R	encoded by transcript ACA1_362790A; protein kinase domain containing protein	complement(join(178149..178471,178558..178857,178932..179315,179450..180363,180437..180493,180583..180875,180985..182483,182744..183563))	Acanthamoeba castellanii str. Neff	14912255
ACA1_362800	CDS	ACA1_362800	NW_004457269.1	185487	186759	D	encoded by transcript ACA1_362800A; uncharacterized protein	join(185487..186104,186271..186759)	Acanthamoeba castellanii str. Neff	14912299
ACA1_362810	CDS	ACA1_362810	NW_004457269.1	187012	188498	D	encoded by transcript ACA1_362810A; Tyrosyl-tRNA synthetase	join(187012..187451,187528..187628,187745..187891,188037..188096,188171..188288,188366..188498)	Acanthamoeba castellanii str. Neff	14912258
ACA1_362820	CDS	ACA1_362820	NW_004457269.1	188564	189708	D	encoded by transcript ACA1_362820A; uncharacterized protein	join(188564..188670,188770..188858,188982..189010,189095..189181,189278..189447,189558..189708)	Acanthamoeba castellanii str. Neff	14912251
ACA1_362830	CDS	ACA1_362830	NW_004457269.1	192644	193639	D	encoded by transcript ACA1_362830A; oxidoreductase, putative	192644..193639	Acanthamoeba castellanii str. Neff	14912303
ACA1_362840	CDS	ACA1_362840	NW_004457269.1	193928	194539	R	encoded by transcript ACA1_362840A; uncharacterized protein	complement(193928..194539)	Acanthamoeba castellanii str. Neff	14912304
ACA1_362850	CDS	ACA1_362850	NW_004457269.1	194959	195327	R	encoded by transcript ACA1_362850A; uncharacterized protein	complement(join(194959..195080,195120..195327))	Acanthamoeba castellanii str. Neff	14912223
ACA1_362860	CDS	ACA1_362860	NW_004457269.1	196257	198416	R	encoded by transcript ACA1_362860A; von Willebrand factor type A domain containing protein	complement(join(196257..196431,196523..196668,196680..196751,196812..196955,197023..197216,197302..197590,197671..197809,197888..198027,198109..198196,198295..198416))	Acanthamoeba castellanii str. Neff	14912224
ACA1_362870	CDS	ACA1_362870	NW_004457269.1	199298	199762	R	encoded by transcript ACA1_362870A; phage integrase family protein	complement(199298..199762)	Acanthamoeba castellanii str. Neff	14912242
ACA1_362880	CDS	ACA1_362880	NW_004457269.1	200185	201525	R	encoded by transcript ACA1_362880A; uncharacterized protein	complement(join(200185..200355,200377..201525))	Acanthamoeba castellanii str. Neff	14912275
ACA1_362890	CDS	ACA1_362890	NW_004457269.1	201562	202383	R	encoded by transcript ACA1_362890A; uncharacterized protein	complement(join(201562..201654,201742..202383))	Acanthamoeba castellanii str. Neff	14912276
ACA1_362900	CDS	ACA1_362900	NW_004457269.1	202442	203431	R	encoded by transcript ACA1_362900A; uncharacterized protein	complement(join(202442..202546,202688..202947,203005..203431))	Acanthamoeba castellanii str. Neff	14912240
ACA1_362920	CDS	ACA1_362920	NW_004457269.1	211073	212344	R	encoded by transcript ACA1_362920A; uncharacterized protein	complement(join(211073..211196,211252..211409,211498..211592,211723..211860,211966..212152,212231..212344))	Acanthamoeba castellanii str. Neff	14912232
ACA1_362930	CDS	ACA1_362930	NW_004457269.1	212991	214234	R	encoded by transcript ACA1_362930A; uncharacterized protein	complement(join(212991..213086,213141..213393,213420..214234))	Acanthamoeba castellanii str. Neff	14912233
ACA1_362940	CDS	ACA1_362940	NW_004457269.1	214643	215263	R	encoded by transcript ACA1_362940A; uncharacterized protein	complement(join(214643..215042,215055..215263))	Acanthamoeba castellanii str. Neff	14912292
ACA1_362950	CDS	ACA1_362950	NW_004457269.1	216171	216785	D	encoded by transcript ACA1_362950A; uncharacterized protein	join(216171..216174,216244..216785)	Acanthamoeba castellanii str. Neff	14912293
ACA1_362960	CDS	ACA1_362960	NW_004457269.1	217700	219130	R	encoded by transcript ACA1_362960A; uncharacterized protein	complement(217700..219130)	Acanthamoeba castellanii str. Neff	14912229
ACA1_362970	CDS	ACA1_362970	NW_004457269.1	219847	220559	D	encoded by transcript ACA1_362970A; uncharacterized protein	join(219847..220166,220187..220559)	Acanthamoeba castellanii str. Neff	14912230
ACA1_363080	CDS	ACA1_363080	NW_004457269.1	221509	223947	R	encoded by transcript ACA1_363080A; uncharacterized protein	complement(join(<221509..222041,222111..222210,222227..222397,222430..223202,223227..223310,223423..223659,223753..223947))	Acanthamoeba castellanii str. Neff	14912269
ACA1_363090	CDS	ACA1_363090	NW_004457269.1	225052	226539	D	encoded by transcript ACA1_363090A; protein kinase domain containing protein	225052..226539	Acanthamoeba castellanii str. Neff	14912270
ACA1_363100	CDS	ACA1_363100	NW_004457269.1	228116	228754	D	encoded by transcript ACA1_363100A; uncharacterized protein	join(228116..228447,228520..228754)	Acanthamoeba castellanii str. Neff	14912252
ACA1_363110	CDS	ACA1_363110	NW_004457269.1	229474	230568	D	encoded by transcript ACA1_363110A; uncharacterized protein	229474..230568	Acanthamoeba castellanii str. Neff	14912253
ACA1_363120	CDS	ACA1_363120	NW_004457269.1	230716	232392	R	encoded by transcript ACA1_363120A; iridovirus major capsid protein	complement(230716..232392)	Acanthamoeba castellanii str. Neff	14912300
ACA1_363130	CDS	ACA1_363130	NW_004457269.1	233678	234436	D	encoded by transcript ACA1_363130A; uncharacterized protein	233678..234436	Acanthamoeba castellanii str. Neff	14912301
ACA1_363140	CDS	ACA1_363140	NW_004457269.1	236561	236780	D	encoded by transcript ACA1_363140A; uncharacterized protein	join(236561..236603,236629..236780)	Acanthamoeba castellanii str. Neff	14912277
ACA1_363150	CDS	ACA1_363150	NW_004457269.1	236958	237224	R	encoded by transcript ACA1_363150A; uncharacterized protein	complement(join(236958..237056,237183..237224))	Acanthamoeba castellanii str. Neff	14912278
ACA1_363170	CDS	ACA1_363170	NW_004457269.1	238138	238380	D	encoded by transcript ACA1_363170A; uncharacterized protein	238138..238380	Acanthamoeba castellanii str. Neff	14912267
ACA1_363180	CDS	ACA1_363180	NW_004457269.1	240250	241333	D	encoded by transcript ACA1_363180A; uncharacterized protein	join(240250..240484,240519..241333)	Acanthamoeba castellanii str. Neff	14912268
ACA1_363190	CDS	ACA1_363190	NW_004457269.1	241405	241860	R	encoded by transcript ACA1_363190A; uncharacterized protein	complement(241405..241860)	Acanthamoeba castellanii str. Neff	14912206
ACA1_363200	CDS	ACA1_363200	NW_004457269.1	242082	243185	R	encoded by transcript ACA1_363200A; uncharacterized protein	complement(242082..243185)	Acanthamoeba castellanii str. Neff	14912207
ACA1_363210	CDS	ACA1_363210	NW_004457269.1	243491	244624	D	encoded by transcript ACA1_363210A; Fbox domain containing protein	243491..244624	Acanthamoeba castellanii str. Neff	14912208
ACA1_363220	CDS	ACA1_363220	NW_004457269.1	244865	246559	D	encoded by transcript ACA1_363220A; uncharacterized protein	join(244865..245578,245708..246559)	Acanthamoeba castellanii str. Neff	14912288
ACA1_363230	CDS	ACA1_363230	NW_004457269.1	246740	247294	R	encoded by transcript ACA1_363230A; uncharacterized protein	complement(246740..247294)	Acanthamoeba castellanii str. Neff	14912289
ACA1_363240	CDS	ACA1_363240	NW_004457269.1	247689	248714	D	encoded by transcript ACA1_363240A; uncharacterized protein	247689..248714	Acanthamoeba castellanii str. Neff	14912286
ACA1_363250	CDS	ACA1_363250	NW_004457269.1	249680	250275	D	encoded by transcript ACA1_363250A; uncharacterized protein	join(249680..249955,249988..250275)	Acanthamoeba castellanii str. Neff	14912287
ACA1_363260	CDS	ACA1_363260	NW_004457269.1	250603	251571	D	encoded by transcript ACA1_363260A; endonuclease/exonuclease/phosphatase family protein	250603..251571	Acanthamoeba castellanii str. Neff	14912226
ACA1_363270	CDS	ACA1_363270	NW_004457269.1	252259	253146	D	encoded by transcript ACA1_363270A; uncharacterized protein	252259..253146	Acanthamoeba castellanii str. Neff	14912227
ACA1_363290	CDS	ACA1_363290	NW_004457269.1	253741	255418	D	encoded by transcript ACA1_363290A; uncharacterized protein	join(253741..254223,254576..255418)	Acanthamoeba castellanii str. Neff	14912209
ACA1_363300	CDS	ACA1_363300	NW_004457269.1	255659	256477	D	encoded by transcript ACA1_363300A; uncharacterized protein	join(255659..255793,255869..256477)	Acanthamoeba castellanii str. Neff	14912210
ACA1_363310	CDS	ACA1_363310	NW_004457269.1	256568	257646	R	encoded by transcript ACA1_363310A; kelch repeat protein	complement(join(256568..257486,257498..257646))	Acanthamoeba castellanii str. Neff	14912211
ACA1_363320	CDS	ACA1_363320	NW_004457269.1	259790	260665	D	encoded by transcript ACA1_363320A; uncharacterized protein	259790..260665	Acanthamoeba castellanii str. Neff	14912294
ACA1_363330	CDS	ACA1_363330	NW_004457269.1	260870	261488	D	encoded by transcript ACA1_363330A; uncharacterized protein	join(260870..261292,261306..261488)	Acanthamoeba castellanii str. Neff	14912295
ACA1_363340	CDS	ACA1_363340	NW_004457269.1	262799	264074	R	encoded by transcript ACA1_363340A; uncharacterized protein	complement(join(262799..263419,263487..264074))	Acanthamoeba castellanii str. Neff	14912237
ACA1_363350	CDS	ACA1_363350	NW_004457269.1	266938	267289	D	encoded by transcript ACA1_363350A; uncharacterized protein	join(266938..266989,267009..267289)	Acanthamoeba castellanii str. Neff	14912238
ACA1_363360	CDS	ACA1_363360	NW_004457269.1	269448	270038	D	encoded by transcript ACA1_363360A; uncharacterized protein	269448..270038	Acanthamoeba castellanii str. Neff	14912218
ACA1_363370	CDS	ACA1_363370	NW_004457269.1	270643	271506	D	encoded by transcript ACA1_363370A; uncharacterized protein	join(270643..270709,270756..270826,270862..271506)	Acanthamoeba castellanii str. Neff	14912219
ACA1_363380	CDS	ACA1_363380	NW_004457269.1	271869	272336	R	encoded by transcript ACA1_363380A; uncharacterized protein	complement(271869..272336)	Acanthamoeba castellanii str. Neff	14912290
ACA1_363390	CDS	ACA1_363390	NW_004457269.1	272618	273561	R	encoded by transcript ACA1_363390A; uncharacterized protein	complement(join(272618..273220,273316..273561))	Acanthamoeba castellanii str. Neff	14912291
ACA1_363400	CDS	ACA1_363400	NW_004457269.1	274412	274702	R	encoded by transcript ACA1_363400A; uncharacterized protein	complement(274412..274702)	Acanthamoeba castellanii str. Neff	14912247
ACA1_363410	CDS	ACA1_363410	NW_004457269.1	277152	278794	R	encoded by transcript ACA1_363410A; uncharacterized protein	complement(join(277152..277276,277342..277539,277613..277730,277816..278151,278219..278477,278578..278738,278771..278794))	Acanthamoeba castellanii str. Neff	14912248
ACA1_363420	CDS	ACA1_363420	NW_004457269.1	278962	279377	R	encoded by transcript ACA1_363420A; uncharacterized protein	complement(join(278962..279058,279076..279377))	Acanthamoeba castellanii str. Neff	14912249
ACA1_363430	CDS	ACA1_363430	NW_004457269.1	279888	282146	R	encoded by transcript ACA1_363430A; uncharacterized protein	complement(join(279888..280075,280119..280383,280450..280737,280794..281254,281398..281488,281642..281767,281798..281880,281939..282146))	Acanthamoeba castellanii str. Neff	14912239
ACA1_256230	CDS	ACA1_256230	NW_004457268.1	25	1833	D	encoded by transcript ACA1_256230A; phosphatidylinositol Nacetylglucosaminyltransferase subunit c, putative	join(<25..189,357..453,551..617,703..839,935..1121,1247..1394,1518..1684,1764..1833)	Acanthamoeba castellanii str. Neff	14911968
ACA1_256240	CDS	ACA1_256240	NW_004457268.1	2996	3585	D	encoded by transcript ACA1_256240A; uncharacterized protein	join(2996..3229,3303..3407,3478..3585)	Acanthamoeba castellanii str. Neff	14912091
ACA1_256250	CDS	ACA1_256250	NW_004457268.1	3716	4201	D	encoded by transcript ACA1_256250A; uncharacterized protein	join(3716..3762,3871..>4201)	Acanthamoeba castellanii str. Neff	14912090
ACA1_256360	CDS	ACA1_256360	NW_004457268.1	6373	7198	D	encoded by transcript ACA1_256360A; uncharacterized protein	join(6373..6882,6953..7198)	Acanthamoeba castellanii str. Neff	14912138
ACA1_256380	CDS	ACA1_256380	NW_004457268.1	13551	16061	R	encoded by transcript ACA1_256380A; UBA/TS-N domain containing protein	complement(join(13551..13976,14110..14441,14550..14660,14746..14878,14951..15071,15165..15439,15508..15639,15727..15772,15877..16061))	Acanthamoeba castellanii str. Neff	14912116
ACA1_256390	CDS	ACA1_256390	NW_004457268.1	17199	25107	D	encoded by transcript ACA1_256390A; histidinol dehydrogenase	join(17199..17238,17375..17488,17669..17780,17902..17966,18046..18116,18225..18326,18415..18506,18583..18719,18800..18907,18981..19220,19316..19439,19531..19651,19751..20158,20226..20385,20462..20580,20664..20774,20872..21120,21182..21287,21358..21473,21560..21686,21755..22057,22157..22318,22429..22577,22661..22727,22805..22888,22968..23243,23328..23528,23676..23779,23843..24059,24139..24263,24382..24720,24808..25107)	Acanthamoeba castellanii str. Neff	14911956
ACA1_256400	CDS	ACA1_256400	NW_004457268.1	25326	26146	R	encoded by transcript ACA1_256400A; Ras subfamily protein	complement(join(25326..25765,25873..26146))	Acanthamoeba castellanii str. Neff	14912123
ACA1_256410	CDS	ACA1_256410	NW_004457268.1	26382	29295	D	encoded by transcript ACA1_256410A; ATPase, AAA domain containing protein	join(26382..26682,26747..27157,27243..27394,27465..27902,27967..28235,28316..28465,28537..28879,28945..29048,29133..29295)	Acanthamoeba castellanii str. Neff	14912124
ACA1_256420	CDS	ACA1_256420	NW_004457268.1	29555	30827	D	encoded by transcript ACA1_256420A; eukaryotic initiation factor 4E protein, putative	join(29555..29638,29778..29852,29996..30133,30473..30677,30766..30827)	Acanthamoeba castellanii str. Neff	14912170
ACA1_256430	CDS	ACA1_256430	NW_004457268.1	31207	31571	R	encoded by transcript ACA1_256430A; uncharacterized protein	complement(join(31207..31404,31488..31571))	Acanthamoeba castellanii str. Neff	14912150
ACA1_256440	CDS	ACA1_256440	NW_004457268.1	31875	32628	D	encoded by transcript ACA1_256440A; uncharacterized protein	join(31875..31994,32109..32288,32354..32448,32598..32628)	Acanthamoeba castellanii str. Neff	14912151
ACA1_256450	CDS	ACA1_256450	NW_004457268.1	33005	36515	D	encoded by transcript ACA1_256450A; Poly(ADPribose) polymerase catalytic domain containing protein	join(33005..33015,33036..33137,33226..33309,33391..33770,33863..34029,34113..34236,34298..34384,34479..34813,34900..35016,35085..35185,35277..35350,35427..35479,35583..35810,35877..35972,36055..36279,36375..36515)	Acanthamoeba castellanii str. Neff	14912166
ACA1_256460	CDS	ACA1_256460	NW_004457268.1	36617	38904	D	encoded by transcript ACA1_256460A; Fbox domain containing protein	join(36617..36856,36884..37010,37074..37143,37207..37310,37398..37612,37696..38904)	Acanthamoeba castellanii str. Neff	14912066
ACA1_256470	CDS	ACA1_256470	NW_004457268.1	39579	40022	R	encoded by transcript ACA1_256470A; uncharacterized protein	complement(join(39579..39587,39661..39731,39863..39909,39970..40022))	Acanthamoeba castellanii str. Neff	14912067
ACA1_256480	CDS	ACA1_256480	NW_004457268.1	40614	42315	R	encoded by transcript ACA1_256480A; 2hydroxy-3-oxopropionate reductase, putative	complement(join(40614..40745,40794..41041,41196..41292,41431..41538,41645..41790,41894..42151,42231..42315))	Acanthamoeba castellanii str. Neff	14912158
ACA1_256490	CDS	ACA1_256490	NW_004457268.1	42481	43271	D	encoded by transcript ACA1_256490A; uncharacterized protein	join(42481..42616,42821..43049,43115..43271)	Acanthamoeba castellanii str. Neff	14912127
ACA1_256500	CDS	ACA1_256500	NW_004457268.1	43467	46238	R	encoded by transcript ACA1_256500A; uncharacterized protein	complement(43467..46238)	Acanthamoeba castellanii str. Neff	14911997
ACA1_256510	CDS	ACA1_256510	NW_004457268.1	46900	47323	R	encoded by transcript ACA1_256510A; Actobindin, putative	complement(join(46900..46970,47128..47323))	Acanthamoeba castellanii str. Neff	14912028
ACA1_256520	CDS	ACA1_256520	NW_004457268.1	47858	48940	R	encoded by transcript ACA1_256520A; protein kinase domain containing protein	complement(47858..48940)	Acanthamoeba castellanii str. Neff	14912109
ACA1_256530	CDS	ACA1_256530	NW_004457268.1	49241	51224	R	encoded by transcript ACA1_256530A; GmCK3p, putative	complement(join(49241..49472,49616..49714,49829..49904,49987..50071,50147..50299,50398..50474,50544..50636,50756..51224))	Acanthamoeba castellanii str. Neff	14912110
ACA1_256540	CDS	ACA1_256540	NW_004457268.1	51603	55829	D	encoded by transcript ACA1_256540A; histone deacetylase domain containing protein	join(51603..51878,51999..52244,52302..52416,52542..53005,53118..53207,53305..53424,53586..53865,53960..54043,54124..54265,54364..54452,54537..54619,54750..55829)	Acanthamoeba castellanii str. Neff	14912040
ACA1_256550	CDS	ACA1_256550	NW_004457268.1	56050	56472	R	encoded by transcript ACA1_256550A; uncharacterized protein	complement(56050..56472)	Acanthamoeba castellanii str. Neff	14912041
ACA1_256560	CDS	ACA1_256560	NW_004457268.1	57104	57472	D	encoded by transcript ACA1_256560A; uncharacterized protein	57104..57472	Acanthamoeba castellanii str. Neff	14912115
ACA1_256570	CDS	ACA1_256570	NW_004457268.1	57886	58438	D	encoded by transcript ACA1_256570A; uncharacterized protein	join(57886..58140,58358..58438)	Acanthamoeba castellanii str. Neff	14912187
ACA1_256580	CDS	ACA1_256580	NW_004457268.1	58628	58996	R	encoded by transcript ACA1_256580A; uncharacterized protein	complement(58628..58996)	Acanthamoeba castellanii str. Neff	14912152
ACA1_256590	CDS	ACA1_256590	NW_004457268.1	59398	59885	D	encoded by transcript ACA1_256590A; uncharacterized protein	join(59398..59436,59664..59885)	Acanthamoeba castellanii str. Neff	14912153
ACA1_256600	CDS	ACA1_256600	NW_004457268.1	60019	61296	R	encoded by transcript ACA1_256600A; uncharacterized protein	complement(join(60019..60645,60671..60823,60844..61296))	Acanthamoeba castellanii str. Neff	14912162
ACA1_256610	CDS	ACA1_256610	NW_004457268.1	61650	65177	R	encoded by transcript ACA1_256610A; uncharacterized protein	complement(join(61650..61870,61962..62483,62580..62897,62990..63175,63300..63449,63525..63695,63770..63847,63923..64009,64093..64179,64259..64450,64535..64624,64696..64796,64884..64976,65155..65177))	Acanthamoeba castellanii str. Neff	14912163
ACA1_256620	CDS	ACA1_256620	NW_004457268.1	65588	67741	R	encoded by transcript ACA1_256620A; UDPN-acetylglucosamine pyrophosphorylase 1, putative	complement(join(65588..65637,65662..65953,66091..66202,66296..66501,66581..66741,66823..67038,67178..67313,67344..67468,67564..67741))	Acanthamoeba castellanii str. Neff	14912121
ACA1_256630	CDS	ACA1_256630	NW_004457268.1	68076	70348	D	encoded by transcript ACA1_256630A; Fbox domain containing protein	join(68076..68237,68391..68480,68556..68629,68810..68885,68965..69028,69295..69448,69521..69647,69746..69922,69976..70060,70137..70348)	Acanthamoeba castellanii str. Neff	14912122
ACA1_256640	CDS	ACA1_256640	NW_004457268.1	70439	72070	D	encoded by transcript ACA1_256640A; cyclopropanefatty-acyl-phospholipid synthase	join(70439..70676,70762..70941,71121..71314,71387..71503,71570..71771,71847..72070)	Acanthamoeba castellanii str. Neff	14912098
ACA1_256650	CDS	ACA1_256650	NW_004457268.1	72263	77311	D	encoded by transcript ACA1_256650A; von Willebrand factor type A domain containing protein	join(72263..72278,72359..72423,72529..72619,72700..72815,72941..73096,73258..73357,73436..73563,73972..74071,74150..74309,74458..74736,74881..75017,75114..75244,75391..75607,75712..75832,75946..76148,76279..76362,76461..77311)	Acanthamoeba castellanii str. Neff	14912144
ACA1_256760	CDS	ACA1_256760	NW_004457268.1	78327	81642	R	encoded by transcript ACA1_256760A; uncharacterized protein	complement(join(78327..78764,78781..78793,78816..80745,80837..81029,81103..81642))	Acanthamoeba castellanii str. Neff	14911939
ACA1_256770	CDS	ACA1_256770	NW_004457268.1	82803	83198	R	encoded by transcript ACA1_256770A; uncharacterized protein	complement(82803..83198)	Acanthamoeba castellanii str. Neff	14912197
ACA1_256780	CDS	ACA1_256780	NW_004457268.1	83486	98632	R	encoded by transcript ACA1_256780A; Inositol 1,4,5trisphosphate receptor type 2, putative	complement(join(83486..84124,84139..86091,86196..86522,86665..86786,86922..87017,87143..87300,87426..87559,87667..87847,87929..88100,88266..88399,88533..88712,88848..89017,89128..89277,89408..89548,89618..89694,89789..89942,90029..90158,90244..90343,90432..90627,90728..90893,91014..91118,91213..91349,91476..91629,91726..91824,91914..92032,92169..92279,92357..92465,92602..92723,92828..92968,93060..93134,93251..93481,93563..93641,93724..93863,93955..94019,94093..94248,94316..94433,94508..94855,94943..95095,95287..95565,95615..95812,95898..96101,96193..96318,96408..96515,96610..96727,96817..96978,97080..97207,97331..97639,97799..98044,98117..98277,98391..98458,98547..98632))	Acanthamoeba castellanii str. Neff	14912120
ACA1_256790	CDS	ACA1_256790	NW_004457268.1	99190	101907	R	encoded by transcript ACA1_256790A; Fbox domain containing protein	complement(join(99190..99384,99658..99783,99906..100038,100391..100550,100654..100776,100854..100923,101023..101171,101285..101351,101451..101525,101677..101907))	Acanthamoeba castellanii str. Neff	14912011
ACA1_256800	CDS	ACA1_256800	NW_004457268.1	102323	103520	R	encoded by transcript ACA1_256800A; ab-hydrolase associated lipase region protein	complement(join(102323..102441,102517..102547,102659..102760,102864..102958,103032..103178,103265..103520))	Acanthamoeba castellanii str. Neff	14912009
ACA1_256910	CDS	ACA1_256910	NW_004457268.1	104260	105079	R	encoded by transcript ACA1_256910A; Fbox domain containing protein	complement(join(104260..104487,104876..105079))	Acanthamoeba castellanii str. Neff	14912010
ACA1_256920	CDS	ACA1_256920	NW_004457268.1	105457	106485	R	encoded by transcript ACA1_256920A; triacylglycerol lipase	complement(join(105457..105575,105651..105742,105813..105829,105908..106150,106218..106319,106423..106485))	Acanthamoeba castellanii str. Neff	14912029
ACA1_256930	CDS	ACA1_256930	NW_004457268.1	107957	109342	R	encoded by transcript ACA1_256930A; nicotinamide n-methyltransferase	complement(join(107957..108227,108351..108364,108450..108544,108629..108745,108815..108884,108983..109047,109118..109218,109335..109342))	Acanthamoeba castellanii str. Neff	14911986
ACA1_256940	CDS	ACA1_256940	NW_004457268.1	109439	110401	R	encoded by transcript ACA1_256940A; Ser/Thr phosphatase family superfamily protein	complement(109439..110401)	Acanthamoeba castellanii str. Neff	14912048
ACA1_256950	CDS	ACA1_256950	NW_004457268.1	110940	112634	R	encoded by transcript ACA1_256950A; homoserine kinase, putative	complement(join(110940..111072,111154..111320,111418..111500,111568..111662,111745..111813,111905..112029,112131..112268,112348..112449,112539..112634))	Acanthamoeba castellanii str. Neff	14912049
ACA1_256960	CDS	ACA1_256960	NW_004457268.1	112736	115468	R	encoded by transcript ACA1_256960A; protein kinase domain containing protein	complement(join(112736..112954,113075..113178,113278..113399,113483..113636,113960..114096,114135..114330,114410..114502,114569..114647,114710..114771,114834..114886,114967..115176,115263..115468))	Acanthamoeba castellanii str. Neff	14911995
ACA1_256970	CDS	ACA1_256970	NW_004457268.1	115889	116878	R	encoded by transcript ACA1_256970A; coated vesicle membrane protein isoform 3, putative	complement(join(115889..115905,115988..116095,116166..116273,116342..116546,116666..116878))	Acanthamoeba castellanii str. Neff	14912021
ACA1_256980	CDS	ACA1_256980	NW_004457268.1	117012	118900	R	encoded by transcript ACA1_256980A; cysteine synthase	complement(join(117012..117232,117304..117426,117498..117858,118036..118083,118195..118267,118351..118390,118477..118509,118582..118680,118783..118900))	Acanthamoeba castellanii str. Neff	14912022
ACA1_256990	CDS	ACA1_256990	NW_004457268.1	118998	119879	R	encoded by transcript ACA1_256990A; Hypothetical protein	complement(118998..119879)	Acanthamoeba castellanii str. Neff	14912026
ACA1_257000	CDS	ACA1_257000	NW_004457268.1	120679	122218	D	encoded by transcript ACA1_257000A; peroxisomal 3hydroxyisobutyryl-coenzyme A hydrolase	join(120679..120778,120899..121069,121147..121367,121442..121514,121597..121760,121864..121910,121979..122084,122138..122218)	Acanthamoeba castellanii str. Neff	14912131
ACA1_257010	CDS	ACA1_257010	NW_004457268.1	122747	126762	D	encoded by transcript ACA1_257010A; protein kinase domain containing protein	join(122747..122884,123046..123161,123342..123368,123628..123730,123850..123994,124076..124151,124274..124368,124506..124557,124656..124739,124822..124942,125037..125085,125253..125399,125504..125612,125708..125785,125895..126035,126156..126762)	Acanthamoeba castellanii str. Neff	14912045
ACA1_257020	CDS	ACA1_257020	NW_004457268.1	126966	128324	R	encoded by transcript ACA1_257020A; uncharacterized protein	complement(join(126966..127300,127392..127710,127817..127985,128086..128324))	Acanthamoeba castellanii str. Neff	14912139
ACA1_257030	CDS	ACA1_257030	NW_004457268.1	129040	132608	D	encoded by transcript ACA1_257030A; WD domain G-beta repeat-containing protein	join(129040..129333,129511..129589,129696..129802,129908..130043,130193..130497,130628..130725,130830..130940,131025..131272,131387..131580,131716..131884,131981..132120,132224..132411,132500..132608)	Acanthamoeba castellanii str. Neff	14912140
ACA1_257040	CDS	ACA1_257040	NW_004457268.1	132708	133851	R	encoded by transcript ACA1_257040A; MaoClike dehydratase domain containing protein	complement(join(132708..132773,132881..133041,133132..133209,133309..133393,133504..133595,133794..133851))	Acanthamoeba castellanii str. Neff	14912128
ACA1_257050	CDS	ACA1_257050	NW_004457268.1	134011	136426	D	encoded by transcript ACA1_257050A; uncharacterized protein	join(134011..134319,134438..134560,134707..134866,134948..135137,135215..135316,135435..135496,135602..135642,135779..136426)	Acanthamoeba castellanii str. Neff	14912004
ACA1_257170	CDS	ACA1_257170	NW_004457268.1	138640	140604	D	encoded by transcript ACA1_257170A; uncharacterized protein	join(138640..138670,139262..139389,139549..139618,139713..139823,139982..140156,140249..140375,140528..>140604)	Acanthamoeba castellanii str. Neff	14912129
ACA1_257280	CDS	ACA1_257280	NW_004457268.1	140985	144901	R	encoded by transcript ACA1_257280A; chloride transporter, chloride channel (ClC) subfamily protein	complement(join(140985..141082,141203..141446,141544..141641,141838..142024,142136..142264,142385..142460,142548..142695,142829..142908,143008..143113,143229..143307,143390..143599,143693..143814,143940..144094,144303..144901))	Acanthamoeba castellanii str. Neff	14911969
ACA1_257290	CDS	ACA1_257290	NW_004457268.1	145874	146930	R	encoded by transcript ACA1_257290A; zinc finger, C3HC4 type (RING finger) domain containing protein	complement(join(145874..145988,146052..146731,146880..146930))	Acanthamoeba castellanii str. Neff	14912053
ACA1_257300	CDS	ACA1_257300	NW_004457268.1	147361	148838	R	encoded by transcript ACA1_257300A; Nicotinamide-nucleotide adenylyltransferase	complement(join(147361..147465,147565..147716,147796..147842,147984..148073,148160..148293,148396..148494,148758..148838))	Acanthamoeba castellanii str. Neff	14912054
ACA1_257310	CDS	ACA1_257310	NW_004457268.1	149238	150319	D	encoded by transcript ACA1_257310A; Nicotinamide-nucleotide adenylyltransferase	join(149238..149249,149321..149419,149536..149672,149747..149815,149945..150143,150215..150319)	Acanthamoeba castellanii str. Neff	14911965
ACA1_257320	CDS	ACA1_257320	NW_004457268.1	150438	151300	R	encoded by transcript ACA1_257320A; Pyridoxine/pyridoxamine 5'-phosphate oxidase	complement(join(150438..150623,150713..150784,150899..151024,151161..151253,151283..151300))	Acanthamoeba castellanii str. Neff	14912088
ACA1_257430	CDS	ACA1_257430	NW_004457268.1	151497	154158	R	encoded by transcript ACA1_257430A; pyridoxamine 5'phosphate oxidase family superfamily protein	complement(join(151497..151601,151719..151870,151950..151996,152134..152223,152294..152427,152527..152625,153005..153043,153173..153349,153441..153512,153631..153756,153871..154030,154145..154158))	Acanthamoeba castellanii str. Neff	14912125
ACA1_257540	CDS	ACA1_257540	NW_004457268.1	154516	156144	D	encoded by transcript ACA1_257540A; ribonuclease, T2 family	join(154516..154747,154985..155219,155436..155614,155720..155823,155929..156144)	Acanthamoeba castellanii str. Neff	14912171
ACA1_257550	CDS	ACA1_257550	NW_004457268.1	156630	157073	R	encoded by transcript ACA1_257550A; uncharacterized protein	complement(join(156630..156641,156738..156838,156920..157073))	Acanthamoeba castellanii str. Neff	14912172
ACA1_257560	CDS	ACA1_257560	NW_004457268.1	157426	157939	R	encoded by transcript ACA1_257560A; uncharacterized protein	complement(join(157426..157626,157712..157939))	Acanthamoeba castellanii str. Neff	14911977
ACA1_257570	CDS	ACA1_257570	NW_004457268.1	158185	160132	R	encoded by transcript ACA1_257570A; uncharacterized protein	complement(join(158185..159026,159248..159448,159553..159762,159866..160003,160126..160132))	Acanthamoeba castellanii str. Neff	14912099
ACA1_257690	CDS	ACA1_257690	NW_004457268.1	166293	166639	D	encoded by transcript ACA1_257690A; alkyl-dihydroxyacetone phosphate synthase	166293..>166639	Acanthamoeba castellanii str. Neff	14912020
ACA1_257800	CDS	ACA1_257800	NW_004457268.1	167479	168649	D	encoded by transcript ACA1_257800A; FAD linked oxidase, Cterminal domain containing protein	join(167479..167658,167799..168169,168288..168396,168488..168649)	Acanthamoeba castellanii str. Neff	14912149
ACA1_257910	CDS	ACA1_257910	NW_004457268.1	174648	175064	R	encoded by transcript ACA1_257910A; uncharacterized protein	complement(174648..175064)	Acanthamoeba castellanii str. Neff	14912001
ACA1_257920	CDS	ACA1_257920	NW_004457268.1	175512	178285	D	encoded by transcript ACA1_257920A; uncharacterized protein	join(175512..175602,175923..176037,176152..176275,176381..176501,176593..176739,176836..176986,177103..177305,177454..177829,177926..178034,178124..178285)	Acanthamoeba castellanii str. Neff	14912002
ACA1_257930	CDS	ACA1_257930	NW_004457268.1	178420	179586	R	encoded by transcript ACA1_257930A; uncharacterized protein	complement(join(178420..178735,178851..179382,179580..179586))	Acanthamoeba castellanii str. Neff	14912003
ACA1_257940	CDS	ACA1_257940	NW_004457268.1	180007	181810	R	encoded by transcript ACA1_257940A; alphagalactosidase, putative	complement(join(180007..180145,180237..180353,180472..180669,180740..180780,180857..180989,181051..181208,181292..181405,181673..181810))	Acanthamoeba castellanii str. Neff	14912167
ACA1_257950	CDS	ACA1_257950	NW_004457268.1	183356	186717	R	encoded by transcript ACA1_257950A; uncharacterized protein	complement(join(183356..185291,185395..185729,185813..185891,185981..186076,186409..186516,186605..186717))	Acanthamoeba castellanii str. Neff	14912136
ACA1_257960	CDS	ACA1_257960	NW_004457268.1	187011	188882	D	encoded by transcript ACA1_257960A; NADPH dehydrogenase	join(187011..187204,187312..187558,187657..187749,187826..188035,188136..188329,188421..188566,188663..188756,188831..188882)	Acanthamoeba castellanii str. Neff	14912057
ACA1_257970	CDS	ACA1_257970	NW_004457268.1	189040	189718	R	encoded by transcript ACA1_257970A; Endoprotease FURIN, putative	complement(join(189040..189117,189221..189414,189664..189718))	Acanthamoeba castellanii str. Neff	14912132
ACA1_257980	CDS	ACA1_257980	NW_004457268.1	190167	196428	D	encoded by transcript ACA1_257980A; 5oxoprolinase	join(190167..190247,190361..190462,190563..190719,190796..190936,191039..191118,191244..191404,191520..191704,191811..191878,191980..192229,192322..192563,192628..192942,193033..193277,193352..193564,193669..193810,193930..193995,194008..194109,194255..194422,194613..194625,194639..194682,194778..194865,194987..195135,195203..195248,195341..195465,195540..195653,195726..195879,195988..196152,196250..196428)	Acanthamoeba castellanii str. Neff	14912133
ACA1_257990	CDS	ACA1_257990	NW_004457268.1	197010	198047	D	encoded by transcript ACA1_257990A; uncharacterized protein	join(197010..197060,197131..197185,197204..197272,197395..197466,197496..197669,197883..198006,198041..198047)	Acanthamoeba castellanii str. Neff	14911961
ACA1_258000	CDS	ACA1_258000	NW_004457268.1	199235	199762	D	encoded by transcript ACA1_258000A; uncharacterized protein	join(199235..199507,199598..199762)	Acanthamoeba castellanii str. Neff	14911955
ACA1_258010	CDS	ACA1_258010	NW_004457268.1	199885	201339	R	encoded by transcript ACA1_258010A; BRCA1 C Terminus (BRCT) domain containing protein	complement(join(199885..200097,200206..200612,200735..200813,200887..201339))	Acanthamoeba castellanii str. Neff	14912179
ACA1_258020	CDS	ACA1_258020	NW_004457268.1	201332	202499	D	encoded by transcript ACA1_258020A; 5-oxoprolinase (ATP-hydrolyzing), putative	join(201332..201421,201692..201936,201950..201962,202112..202323,202445..>202499)	Acanthamoeba castellanii str. Neff	14912027
ACA1_258230	CDS	ACA1_258230	NW_004457268.1	202927	205911	R	encoded by transcript ACA1_258230A; ATPdependent DNA ligase domain containing protein	complement(join(<202927..203429,203489..203614,203717..203822,203907..204008,204086..204231,204301..204493,204600..204721,204886..204973,205070..205219,205358..205482,205572..205911))	Acanthamoeba castellanii str. Neff	14912180
ACA1_258240	CDS	ACA1_258240	NW_004457268.1	206536	207056	D	encoded by transcript ACA1_258240A; KH domain containing protein	join(206536..206620,206710..206910,207040..207056)	Acanthamoeba castellanii str. Neff	14912030
ACA1_258250	CDS	ACA1_258250	NW_004457268.1	207645	210086	D	encoded by transcript ACA1_258250A; KH domain containing protein	join(207645..207729,207810..208010,208084..208187,208273..208375,208781..208944,209046..209209,209294..209516,209910..210086)	Acanthamoeba castellanii str. Neff	14912147
ACA1_258260	CDS	ACA1_258260	NW_004457268.1	210146	214880	R	encoded by transcript ACA1_258260A; dual specificity phosphatase, catalytic domain containing protein	complement(join(210146..210475,210576..210731,210838..210938,211059..211199,211445..211555,211735..211836,211957..212057,212310..212488,212561..212630,212704..212810,212945..213150,213248..213767,213846..214566,214690..214880))	Acanthamoeba castellanii str. Neff	14912148
ACA1_258270	CDS	ACA1_258270	NW_004457268.1	215506	219719	D	encoded by transcript ACA1_258270A; Ras subfamily protein	join(215506..215617,215741..216204,216302..216391,216535..216925,217048..217245,217312..217415,217479..217676,217811..217977,218090..218358,218475..218586,218680..218827,218938..219009,219105..219317,219438..219497,219531..219719)	Acanthamoeba castellanii str. Neff	14912075
ACA1_258280	CDS	ACA1_258280	NW_004457268.1	220363	221274	R	encoded by transcript ACA1_258280A; uncharacterized protein	complement(join(220363..220408,220487..220612,220745..220797,220890..220976,221116..221274))	Acanthamoeba castellanii str. Neff	14912196
ACA1_258290	CDS	ACA1_258290	NW_004457268.1	221641	222254	D	encoded by transcript ACA1_258290A; uncharacterized protein	join(221641..221649,221727..221792,221856..221884,221965..222068,222175..222254)	Acanthamoeba castellanii str. Neff	14912014
ACA1_258300	CDS	ACA1_258300	NW_004457268.1	222418	223309	R	encoded by transcript ACA1_258300A; AIG2like family protein	complement(join(222418..222433,222444..222477,222544..222682,222771..222844,222957..223112,223228..223309))	Acanthamoeba castellanii str. Neff	14912039
ACA1_258310	CDS	ACA1_258310	NW_004457268.1	223705	231858	D	encoded by transcript ACA1_258310A; IgA-specific serine endopeptidase	join(223705..224252,224347..224750,225017..225133,225216..225322,225465..225663,225778..225926,226024..226143,226240..226441,226545..227513,227623..227770,227883..228025,228138..228392,228492..228859,228976..229208,229369..230426,230589..230736,230836..231010,231100..231221,231345..231446,231516..231618,231742..231858)	Acanthamoeba castellanii str. Neff	14912078
ACA1_258320	CDS	ACA1_258320	NW_004457268.1	232738	234481	D	encoded by transcript ACA1_258320A; deltaaminolevulinic acid dehydratase	join(232738..232954,233105..233186,233320..233440,233523..233660,233817..233984,234116..234273,234361..234481)	Acanthamoeba castellanii str. Neff	14911960
ACA1_258330	CDS	ACA1_258330	NW_004457268.1	235247	236455	D	encoded by transcript ACA1_258330A; uncharacterized protein	join(235247..235638,235989..236098,236175..236455)	Acanthamoeba castellanii str. Neff	14912191
ACA1_258340	CDS	ACA1_258340	NW_004457268.1	236698	240850	D	encoded by transcript ACA1_258340A; non-specific protein-tyrosine kinase	join(236698..237015,237176..237373,237586..238110,238305..238470,238567..239241,239316..239397,239509..239648,239753..239845,239950..240011,240108..240168,240275..240344,240424..240850)	Acanthamoeba castellanii str. Neff	14912189
ACA1_258450	CDS	ACA1_258450	NW_004457268.1	241333	242703	D	encoded by transcript ACA1_258450A; uncharacterized protein	join(241333..241346,241482..241587,241707..241779,241875..242038,242139..242387,242506..242703)	Acanthamoeba castellanii str. Neff	14912093
ACA1_258460	CDS	ACA1_258460	NW_004457268.1	242883	245012	D	encoded by transcript ACA1_258460A; ATP synthase, putative	join(242883..242958,243057..243291,243308..245012)	Acanthamoeba castellanii str. Neff	14911966
ACA1_258470	CDS	ACA1_258470	NW_004457268.1	245087	245943	D	encoded by transcript ACA1_258470A; acetyltransferase, GNAT superfamily protein	join(245087..245159,245231..245322,245397..245493,245606..245773,245861..245943)	Acanthamoeba castellanii str. Neff	14911967
ACA1_258480	CDS	ACA1_258480	NW_004457268.1	246023	252382	R	encoded by transcript ACA1_258480A; NADbinding domain 4 domain containing protein	complement(join(246023..246697,246786..246911,247012..247153,247293..247491,247564..247723,247889..247992,248095..248217,248382..248498,248699..248817,248910..249019,249122..249231,249368..249392,249534..249633,249751..249854,249925..250037,250126..250329,250432..250548,250651..250729,250808..250942,251048..251254,251339..251941,252272..252382))	Acanthamoeba castellanii str. Neff	14911958
ACA1_258500	CDS	ACA1_258500	NW_004457268.1	255647	258156	R	encoded by transcript ACA1_258500A; putative anion transporter, putative	complement(join(255647..255853,255925..256167,256297..256394,256472..256540,256555..256641,256742..256865,256883..256944,257075..257161,257280..257335,257443..257601,257686..257795,258028..258156))	Acanthamoeba castellanii str. Neff	14912113
ACA1_258510	CDS	ACA1_258510	NW_004457268.1	258341	259741	D	encoded by transcript ACA1_258510A; TraB subfamily protein	join(258341..258355,258436..258600,258715..258811,258882..258928,259009..259125,259236..259358,259474..259695,259736..259741)	Acanthamoeba castellanii str. Neff	14912114
ACA1_258520	CDS	ACA1_258520	NW_004457268.1	259855	261297	R	encoded by transcript ACA1_258520A; uncharacterized protein	complement(259855..261297)	Acanthamoeba castellanii str. Neff	14912186
ACA1_258530	CDS	ACA1_258530	NW_004457268.1	261478	269485	R	encoded by transcript ACA1_258530A; uncharacterized protein	complement(join(261478..261795,261879..262103,262181..262337,262425..262554,262623..262722,262872..263019,263135..263346,263464..263562,263641..263817,263890..263941,264191..264355,264444..264673,264762..264885,264987..265081,265254..265422,265517..265656,265725..265809,265889..265951,266327..266432,266506..266601,266634..266903,266977..267073,267147..267339,267451..267594,267668..267837,267921..268077,268187..268334,268584..268895,268962..268981,268998..269220,269344..269485))	Acanthamoeba castellanii str. Neff	14912178
ACA1_258540	CDS	ACA1_258540	NW_004457268.1	269808	270699	D	encoded by transcript ACA1_258540A; uncharacterized protein	join(269808..269965,270000..270018,270160..270699)	Acanthamoeba castellanii str. Neff	14912012
ACA1_258550	CDS	ACA1_258550	NW_004457268.1	270771	273409	R	encoded by transcript ACA1_258550A; NOL1/NOP2/sun domain containing protein	complement(join(270771..271121,271179..271243,271313..271420,271534..271609,271700..271761,271867..271973,272047..272132,272247..272679,272789..272931,273059..273117,273193..273273,273352..273409))	Acanthamoeba castellanii str. Neff	14912111
ACA1_258560	CDS	ACA1_258560	NW_004457268.1	273526	274658	D	encoded by transcript ACA1_258560A; uncharacterized protein	join(273526..273687,273772..273813,273889..274003,274110..274209,274327..274511,274588..274658)	Acanthamoeba castellanii str. Neff	14912112
ACA1_258570	CDS	ACA1_258570	NW_004457268.1	274819	276034	R	encoded by transcript ACA1_258570A; CBS domain containing protein	complement(join(274819..274913,275013..275229,275324..276034))	Acanthamoeba castellanii str. Neff	14912074
ACA1_258580	CDS	ACA1_258580	NW_004457268.1	276354	278642	D	encoded by transcript ACA1_258580A; Mannosyltransferase domain containing protein	join(276354..276783,276933..277044,277151..277243,277408..277454,277628..277686,277812..277909,277985..278642)	Acanthamoeba castellanii str. Neff	14912190
ACA1_258590	CDS	ACA1_258590	NW_004457268.1	278701	279507	R	encoded by transcript ACA1_258590A; uncharacterized protein	complement(join(278701..279147,279210..279347,279412..279507))	Acanthamoeba castellanii str. Neff	14912097
ACA1_258600	CDS	ACA1_258600	NW_004457268.1	279663	280374	R	encoded by transcript ACA1_258600A; PH domain containing protein	complement(join(279663..279685,279754..279951,280020..280230,280321..280374))	Acanthamoeba castellanii str. Neff	14912107
ACA1_258610	CDS	ACA1_258610	NW_004457268.1	280596	282168	D	encoded by transcript ACA1_258610A; uncharacterized protein	join(280596..280803,280889..280967,281062..281231,281363..281479,281567..281653,281769..281857,281953..282168)	Acanthamoeba castellanii str. Neff	14912108
ACA1_258620	CDS	ACA1_258620	NW_004457268.1	282321	283970	R	encoded by transcript ACA1_258620A; C2 domain containing protein	complement(join(282321..282407,282664..282852,282968..283072,283159..283360,283476..283587,283693..283731,283814..283970))	Acanthamoeba castellanii str. Neff	14912089
ACA1_258630	CDS	ACA1_258630	NW_004457268.1	284691	288631	R	encoded by transcript ACA1_258630A; ATPase, AAA domain containing protein	complement(join(284691..284792,284874..285023,285103..285183,285287..285361,285507..285596,285691..286106,286347..286431,286547..286603,286697..286827,286914..287120,287318..287364,287439..287648,287960..288114,288458..288631))	Acanthamoeba castellanii str. Neff	14911992
ACA1_258640	CDS	ACA1_258640	NW_004457268.1	288737	294285	D	encoded by transcript ACA1_258640A; peptidase family m1 domain containing protein	join(288737..288974,289163..289302,289366..289472,289558..289695,289798..289895,290092..290184,290372..290478,290595..290654,290743..290850,290960..291100,291209..291327,291409..291519,291626..291669,291754..291791,291893..292072,292167..292277,292387..292539,292830..293080,293417..293457,293557..293656,293727..294049,294164..294285)	Acanthamoeba castellanii str. Neff	14911993
ACA1_258660	CDS	ACA1_258660	NW_004457268.1	297645	298536	R	encoded by transcript ACA1_258660A; phosphorylases family 2 subfamily protein	complement(join(297645..297857,297934..298230,298303..298536))	Acanthamoeba castellanii str. Neff	14912118
ACA1_258670	CDS	ACA1_258670	NW_004457268.1	298879	307180	R	encoded by transcript ACA1_258670A; uncharacterized protein	complement(join(298879..299169,299264..299488,299596..299752,299901..300030,300152..300251,300337..300481,300574..300702,300783..300859,300948..300998,301121..301300,301576..301810,301923..302270,302367..302509,302666..302756,302842..302925,303031..303155,303291..303387,303529..303623,303762..303903,304016..304130,304396..304459,304546..304682,304797..304890,305006..305198,305308..305567,305700..305856,305931..306069,306153..306509,306576..306767,307030..307180))	Acanthamoeba castellanii str. Neff	14912119
ACA1_258680	CDS	ACA1_258680	NW_004457268.1	307384	307680	R	encoded by transcript ACA1_258680A; uncharacterized protein	complement(join(307384..307502,307614..307680))	Acanthamoeba castellanii str. Neff	14912141
ACA1_258690	CDS	ACA1_258690	NW_004457268.1	308153	309102	R	encoded by transcript ACA1_258690A; vesicle trafficking protein, putative	complement(join(308153..308316,308424..308570,308711..308871,308936..309102))	Acanthamoeba castellanii str. Neff	14912033
ACA1_258700	CDS	ACA1_258700	NW_004457268.1	309330	310848	R	encoded by transcript ACA1_258700A; exosc8 protein	complement(join(309330..309500,309584..309620,309741..309867,309965..310131,310251..310356,310482..310589,310728..310848))	Acanthamoeba castellanii str. Neff	14912034
ACA1_258710	CDS	ACA1_258710	NW_004457268.1	310970	313985	D	encoded by transcript ACA1_258710A; uncharacterized protein	join(310970..311114,311193..311341,311541..311730,311920..311999,312079..312139,312224..312299,312486..312629,312739..312866,313010..313167,313244..313373,313475..313518,313606..313674,313866..>313985)	Acanthamoeba castellanii str. Neff	14912016
ACA1_258720	CDS	ACA1_258720	NW_004457268.1	314072	314483	D	encoded by transcript ACA1_258720A; uncharacterized protein	join(314072..314249,314350..314483)	Acanthamoeba castellanii str. Neff	14912159
ACA1_258730	CDS	ACA1_258730	NW_004457268.1	314577	321663	R	encoded by transcript ACA1_258730A; uncharacterized protein	complement(join(314577..314713,314797..314956,315050..315177,315305..315374,315403..315413,315470..315729,315824..315927,316052..316282,316346..316407,316537..316705,316806..316962,317018..317217,317381..317510,317584..317771,317929..318108,318197..318281,318399..318525,318643..318764,318937..319073,319222..319398,319536..319629,319765..319850,320068..320078,320131..320215,320357..320533,320666..320759,320901..321011,321096..321448,321541..321663))	Acanthamoeba castellanii str. Neff	14912068
ACA1_258840	CDS	ACA1_258840	NW_004457268.1	321734	324491	R	encoded by transcript ACA1_258840A; uncharacterized protein	complement(join(321734..321900,322008..322125,322239..322607,322671..322817,323000..323145,323281..323464,323524..323624,323725..323989,324092..324227,324358..324491))	Acanthamoeba castellanii str. Neff	14912037
ACA1_258850	CDS	ACA1_258850	NW_004457268.1	324834	328051	D	encoded by transcript ACA1_258850A; uncharacterized protein	join(324834..324966,325049..325200,325277..325357,325430..325646,325727..325876,325990..326093,326169..326366,326513..326679,326794..326943,328042..328051)	Acanthamoeba castellanii str. Neff	14912143
ACA1_258960	CDS	ACA1_258960	NW_004457268.1	327841	329510	R	encoded by transcript ACA1_258960A; UBX domain containing protein	complement(join(327841..327868,328110..328238,328339..328526,328664..328774,329017..329116,329239..329510))	Acanthamoeba castellanii str. Neff	14911938
ACA1_258970	CDS	ACA1_258970	NW_004457268.1	329580	330961	R	encoded by transcript ACA1_258970A; uncharacterized protein	complement(join(329580..329665,329728..329786,329918..330005,330262..330326,330478..330568,330718..>330961))	Acanthamoeba castellanii str. Neff	14912061
ACA1_258980	CDS	ACA1_258980	NW_004457268.1	331290	332456	D	encoded by transcript ACA1_258980A; esterase LipO, putative	join(331290..331615,331730..331857,331961..332061,332148..332456)	Acanthamoeba castellanii str. Neff	14912000
ACA1_258990	CDS	ACA1_258990	NW_004457268.1	332917	333454	D	encoded by transcript ACA1_258990A; uncharacterized protein	join(332917..332932,333014..333126,333220..333283,333321..333454)	Acanthamoeba castellanii str. Neff	14912086
ACA1_259000	CDS	ACA1_259000	NW_004457268.1	333631	335548	D	encoded by transcript ACA1_259000A; uncharacterized protein	join(333631..333703,333804..333973,334125..334373,334482..334572,334684..334781,334975..335089,335228..335400,335498..335548)	Acanthamoeba castellanii str. Neff	14912087
ACA1_259010	CDS	ACA1_259010	NW_004457268.1	335724	337472	R	encoded by transcript ACA1_259010A; PH domain containing protein	complement(join(335724..336017,336030..336150,336288..336400,336537..336610,336718..336793,336960..337081,337205..337472))	Acanthamoeba castellanii str. Neff	14912183
ACA1_259120	CDS	ACA1_259120	NW_004457268.1	338215	339476	R	encoded by transcript ACA1_259120A; uncharacterized protein	complement(join(338215..338252,338388..338517,338834..338890,338918..338955,339158..339476))	Acanthamoeba castellanii str. Neff	14911984
ACA1_259130	CDS	ACA1_259130	NW_004457268.1	339634	340486	R	encoded by transcript ACA1_259130A; uncharacterized protein	complement(join(339634..339782,339901..340032,340128..340274,340384..340486))	Acanthamoeba castellanii str. Neff	14911990
ACA1_259240	CDS	ACA1_259240	NW_004457268.1	341454	341703	D	encoded by transcript ACA1_259240A; uncharacterized protein	join(341454..341641,341673..341703)	Acanthamoeba castellanii str. Neff	14911941
ACA1_259360	CDS	ACA1_259360	NW_004457268.1	345701	345973	D	encoded by transcript ACA1_259360A; uncharacterized protein	345701..>345973	Acanthamoeba castellanii str. Neff	14912192
ACA1_259470	CDS	ACA1_259470	NW_004457268.1	346346	347861	R	encoded by transcript ACA1_259470A; uncharacterized protein	complement(join(<346346..346581,346741..346957,347089..347259,347450..347861))	Acanthamoeba castellanii str. Neff	14912193
ACA1_259480	CDS	ACA1_259480	NW_004457268.1	348213	349577	R	encoded by transcript ACA1_259480A; enoylCoA hydratase/isomerase	complement(join(348213..348383,348469..348497,348801..348887,349025..349054,349196..349577))	Acanthamoeba castellanii str. Neff	14912194
ACA1_259490	CDS	ACA1_259490	NW_004457268.1	349838	357113	D	encoded by transcript ACA1_259490A; tetratricopeptide repeat-containing protein	join(349838..350023,350094..350213,350355..350507,350647..350821,351006..351120,351240..351533,351632..351787,351848..351962,352030..352277,352421..352540,352667..353122,353210..353516,353584..353911,354004..354404,354630..354857,354933..355115,355316..355489,355686..355784,355898..356092,356183..356309,356420..356670,356802..357113)	Acanthamoeba castellanii str. Neff	14912073
ACA1_259500	CDS	ACA1_259500	NW_004457268.1	357302	357980	R	encoded by transcript ACA1_259500A; uncharacterized protein	complement(join(357302..357477,357592..357822,357914..357980))	Acanthamoeba castellanii str. Neff	14912164
ACA1_259510	CDS	ACA1_259510	NW_004457268.1	358169	359029	D	encoded by transcript ACA1_259510A; peroxiredoxin 2, putative	join(358169..358268,358341..358446,358553..358877,358961..359029)	Acanthamoeba castellanii str. Neff	14912188
ACA1_259520	CDS	ACA1_259520	NW_004457268.1	359134	359632	D	encoded by transcript ACA1_259520A; uncharacterized protein	join(359134..359527,359607..359632)	Acanthamoeba castellanii str. Neff	14911959
ACA1_259530	CDS	ACA1_259530	NW_004457268.1	362374	363522	R	encoded by transcript ACA1_259530A; uncharacterized protein	complement(join(362374..362749,362805..362914,362998..363151,363289..363435,363485..363522))	Acanthamoeba castellanii str. Neff	14912055
ACA1_259540	CDS	ACA1_259540	NW_004457268.1	363834	373582	R	encoded by transcript ACA1_259540A; SNF2 family Nterminal domain containing protein	complement(join(363834..364140,364301..364739,365029..365674,365792..365929,366066..366264,366403..366525,366598..366941,367031..367162,367251..367441,367554..367857,367995..368166,368283..368402,368500..368777,368954..369074,369185..369702,369812..369949,370089..370175,370317..370457,370626..370808,370955..371152,371299..371502,371635..371742,371785..373014,373183..373332,373526..373582))	Acanthamoeba castellanii str. Neff	14912056
ACA1_259550	CDS	ACA1_259550	NW_004457268.1	373804	387066	D	encoded by transcript ACA1_259550A; SNF2 family Nterminal domain containing protein	join(373804..375154,375282..375506,375704..376079,376288..376474,376635..376829,376982..377050,377266..377478,377612..377850,377996..378167,378398..378985,379120..379170,379518..379695,379881..380028,380129..380300,380390..380511,380802..380903,380975..381077,381182..381265,381510..381549,381795..381870,381898..381942,382011..382279,382623..382777,382944..383159,383302..383393,383661..383856,384231..385119,385267..385340,385356..385517,385651..385705,386231..386478,386563..387066)	Acanthamoeba castellanii str. Neff	14912094
ACA1_259960	CDS	ACA1_259960	NW_004457268.1	387750	389458	D	encoded by transcript ACA1_259960A; cystathionine betasynthase	join(387750..387947,388177..388729,388914..389458)	Acanthamoeba castellanii str. Neff	14911994
ACA1_259970	CDS	ACA1_259970	NW_004457268.1	391981	392315	R	encoded by transcript ACA1_259970A; uncharacterized protein	complement(join(391981..392148,392217..392315))	Acanthamoeba castellanii str. Neff	14912160
ACA1_259980	CDS	ACA1_259980	NW_004457268.1	393406	398933	D	encoded by transcript ACA1_259980A; HEAT repeat domain containing protein	join(393406..393534,393564..393609,393665..393849,393862..393948,394109..394246,394412..395205,395367..395379,395410..395497,395603..395634,395698..395805,396001..396084,396247..396648,396823..397032,397139..397261,397428..397499,397684..398145,398293..398355,398535..398714,398805..398933)	Acanthamoeba castellanii str. Neff	14912161
ACA1_259990	CDS	ACA1_259990	NW_004457268.1	399105	401810	R	encoded by transcript ACA1_259990A; transporter, major facilitator subfamily protein	complement(join(399105..399403,399485..399655,399742..399826,399969..400068,400262..400385,400486..400549,400752..400813,400983..401045,401194..401310,401471..401810))	Acanthamoeba castellanii str. Neff	14911957
ACA1_260000	CDS	ACA1_260000	NW_004457268.1	402030	404186	D	encoded by transcript ACA1_260000A; Peroxin 16 (Pex16), putative	join(402030..402097,402216..402295,402424..402646,402752..402880,403023..403152,403283..403526,403640..403776,403894..404005,404119..404186)	Acanthamoeba castellanii str. Neff	14911991
ACA1_260010	CDS	ACA1_260010	NW_004457268.1	404374	404978	R	encoded by transcript ACA1_260010A; SNARE domain containing protein	complement(join(404374..404580,404685..404859,404947..404978))	Acanthamoeba castellanii str. Neff	14912065
ACA1_260020	CDS	ACA1_260020	NW_004457268.1	405393	407133	D	encoded by transcript ACA1_260020A; coronin3, putative	join(405393..405729,405918..406207,406315..406539,406624..407133)	Acanthamoeba castellanii str. Neff	14912165
ACA1_260030	CDS	ACA1_260030	NW_004457268.1	407333	409722	R	encoded by transcript ACA1_260030A; F-box domain containing protein	complement(join(407333..407422,407495..407665,407758..407960,408080..408171,408353..408423,408528..408668,408831..408962,409106..409243,409317..409357,409449..409722))	Acanthamoeba castellanii str. Neff	14912145
ACA1_260040	CDS	ACA1_260040	NW_004457268.1	409831	410399	D	encoded by transcript ACA1_260040A; transmembrane protein 32 family protein	join(409831..409912,409979..410031,410117..410220,410330..410399)	Acanthamoeba castellanii str. Neff	14912146
ACA1_260050	CDS	ACA1_260050	NW_004457268.1	410605	413392	D	encoded by transcript ACA1_260050A; cation efflux family superfamily protein	join(410605..410744,410860..410988,411266..411501,411638..411876,411946..412181,412271..412505,412618..412863,413111..413392)	Acanthamoeba castellanii str. Neff	14912155
ACA1_260060	CDS	ACA1_260060	NW_004457268.1	413552	414777	D	encoded by transcript ACA1_260060A; sec13like protein	join(413552..413592,413690..413764,413849..413925,414057..414164,414273..414358,414458..414551,414653..414777)	Acanthamoeba castellanii str. Neff	14912051
ACA1_260070	CDS	ACA1_260070	NW_004457268.1	414949	418427	D	encoded by transcript ACA1_260070A; Vacuolar protein sortingassociated protein 29, putative	join(414949..415477,415570..415640,415767..415820,415975..416094,416231..416366,416488..416673,416776..416864,416958..417068,417367..417441,417544..417660,417809..418044,418212..418299,418398..418427)	Acanthamoeba castellanii str. Neff	14912181
ACA1_260080	CDS	ACA1_260080	NW_004457268.1	418658	419781	R	encoded by transcript ACA1_260080A; GAMMA CA3 (GAMMA CARBONIC ANHYDRASE 3), putative	complement(join(418658..418858,418978..419129,419214..419333,419406..419781))	Acanthamoeba castellanii str. Neff	14912182
ACA1_260090	CDS	ACA1_260090	NW_004457268.1	420294	422952	D	encoded by transcript ACA1_260090A; THO complex 5, putative	join(420294..420566,420672..420776,420940..421072,421178..421264,421407..421508,421607..421772,421876..422060,422167..422240,422312..422459,422546..422739,422836..422952)	Acanthamoeba castellanii str. Neff	14912069
ACA1_260100	CDS	ACA1_260100	NW_004457268.1	423331	432836	R	encoded by transcript ACA1_260100A; gtpase-activator protein for Ras family gtpase	complement(join(423331..423402,423477..423873,423990..424126,424222..424379,424489..428101,428231..428599,428737..429421,429524..430221,430314..430640,430764..431201,431303..431431,431533..431823,431952..431999,432140..432241,432462..432620,432744..432836))	Acanthamoeba castellanii str. Neff	14912070
ACA1_260110	CDS	ACA1_260110	NW_004457268.1	433297	434964	R	encoded by transcript ACA1_260110A; nicotinate phosphoribosyltransferase, (NAPRTase) subfamily protein	complement(join(433297..434379,434515..434964))	Acanthamoeba castellanii str. Neff	14912100
ACA1_260120	CDS	ACA1_260120	NW_004457268.1	436024	436846	D	encoded by transcript ACA1_260120A; actin bundling protein	join(436024..436730,436744..436846)	Acanthamoeba castellanii str. Neff	14912096
ACA1_260130	CDS	ACA1_260130	NW_004457268.1	437142	439014	D	encoded by transcript ACA1_260130A; fatty acid desaturase 2, putative	join(437142..437702,437881..437987,438080..438198,438333..438468,438585..439014)	Acanthamoeba castellanii str. Neff	14911998
ACA1_260140	CDS	ACA1_260140	NW_004457268.1	439315	442365	D	encoded by transcript ACA1_260140A; endonuclease III, putative	join(439315..439446,439519..439770,439872..440033,440126..440206,440304..440510,440618..440794,440880..441066,441177..441268,441389..441430,441577..441711,441830..441968,442058..442365)	Acanthamoeba castellanii str. Neff	14912184
ACA1_260150	CDS	ACA1_260150	NW_004457268.1	442464	445616	R	encoded by transcript ACA1_260150A; RhoGEF domain containing protein	complement(join(442464..442865,442877..443727,443852..443995,444068..444113,444257..444415,444506..444723,444913..445051,445199..445372,445506..445616))	Acanthamoeba castellanii str. Neff	14912185
ACA1_260160	CDS	ACA1_260160	NW_004457268.1	446227	449359	D	encoded by transcript ACA1_260160A; protein kinase 2, putative	join(446227..446890,447096..447805,447900..448057,448182..448275,448390..448476,448573..448707,448832..448967,449091..449359)	Acanthamoeba castellanii str. Neff	14912052
ACA1_260170	CDS	ACA1_260170	NW_004457268.1	449672	451042	D	encoded by transcript ACA1_260170A; hemerythrin hhe cation binding subfamily protein	join(<449672..450007,450138..450306,450417..450509,450604..450845,450965..451042)	Acanthamoeba castellanii str. Neff	14912079
ACA1_260180	CDS	ACA1_260180	NW_004457268.1	452158	453396	D	encoded by transcript ACA1_260180A; nitric oxide synthase interacting family protein	join(452158..452321,452425..452536,452631..452727,452792..453080,453183..453396)	Acanthamoeba castellanii str. Neff	14912095
ACA1_260190	CDS	ACA1_260190	NW_004457268.1	453683	454577	R	encoded by transcript ACA1_260190A; ran, putative	complement(join(453683..453824,453907..454176,454251..454368,454466..454577))	Acanthamoeba castellanii str. Neff	14912006
ACA1_260200	CDS	ACA1_260200	NW_004457268.1	455300	456206	R	encoded by transcript ACA1_260200A; RNA recognition motif domain containing protein	complement(join(455300..455434,455513..455569,455648..455731,455837..455951,455963..456021,456093..456206))	Acanthamoeba castellanii str. Neff	14912007
ACA1_260210	CDS	ACA1_260210	NW_004457268.1	456979	458433	D	encoded by transcript ACA1_260210A; integral membrane proteinlike, putative	join(456979..456984,456996..457132,457237..457414,457588..457669,457757..457926,458032..458142,458221..458433)	Acanthamoeba castellanii str. Neff	14912062
ACA1_260220	CDS	ACA1_260220	NW_004457268.1	458790	460332	D	encoded by transcript ACA1_260220A; uncharacterized protein	join(458790..458873,459015..459096,459225..459338,459469..459578,459647..459774,459872..460002,460061..460332)	Acanthamoeba castellanii str. Neff	14912008
ACA1_260230	CDS	ACA1_260230	NW_004457268.1	460437	461398	D	encoded by transcript ACA1_260230A; peptidylprolyl cis-trans isomerase, FKBP-type domain containing protein	join(460437..460625,460847..460933,461038..461122,461185..461281,461359..461398)	Acanthamoeba castellanii str. Neff	14912102
ACA1_260240	CDS	ACA1_260240	NW_004457268.1	461729	463625	D	encoded by transcript ACA1_260240A; mitochondrial carnitine/acylcarnitine carrierlike protein	join(461729..461777,461881..461940,462005..462105,462220..462303,462446..462489,462563..462702,462786..462825,463123..463219,463312..463437,463548..463625)	Acanthamoeba castellanii str. Neff	14912071
ACA1_260250	CDS	ACA1_260250	NW_004457268.1	463892	465782	D	encoded by transcript ACA1_260250A; uncharacterized protein	join(463892..464320,464449..464552,464718..465299,465473..465782)	Acanthamoeba castellanii str. Neff	14912072
ACA1_260260	CDS	ACA1_260260	NW_004457268.1	467114	468925	R	encoded by transcript ACA1_260260A; uncharacterized protein	complement(join(467114..467752,467770..467927,467986..468250,468332..468673,468716..468925))	Acanthamoeba castellanii str. Neff	14912080
ACA1_260270	CDS	ACA1_260270	NW_004457268.1	469155	470398	D	encoded by transcript ACA1_260270A; proteasome subunit alpha type6, putative	join(469155..469224,469319..469413,469480..469561,469649..469798,469953..470131,470246..470398)	Acanthamoeba castellanii str. Neff	14911983
ACA1_260280	CDS	ACA1_260280	NW_004457268.1	470575	473114	R	encoded by transcript ACA1_260280A; uncharacterized protein	complement(join(470575..470690,470787..470877,470942..471124,471140..471582,471766..472623,472724..473114))	Acanthamoeba castellanii str. Neff	14912081
ACA1_260290	CDS	ACA1_260290	NW_004457268.1	473552	479820	R	encoded by transcript ACA1_260290A; ubiquitin thiolesterase	complement(join(473552..476486,476681..476836,476866..477459,477501..479175,479244..479820))	Acanthamoeba castellanii str. Neff	14912082
ACA1_260300	CDS	ACA1_260300	NW_004457268.1	480176	484868	R	encoded by transcript ACA1_260300A; uncharacterized protein	complement(join(480176..480181,480192..480335,480460..480646,480775..480932,481106..481206,481364..481480,481576..481644,481739..481792,481935..482051,482169..482241,482345..482569,483299..483435,483531..483599,483708..483761,483906..484022,484151..484223,484553..484690,484794..484868))	Acanthamoeba castellanii str. Neff	14911985
ACA1_260510	CDS	ACA1_260510	NW_004457268.1	485316	488008	R	encoded by transcript ACA1_260510A; ankyrin, putative	complement(join(485316..485530,485631..485777,485846..485993,486041..486522,486597..486705,486832..487020,487096..487182,487271..487358,487444..487525,487635..487866,487955..488008))	Acanthamoeba castellanii str. Neff	14912137
ACA1_260520	CDS	ACA1_260520	NW_004457268.1	488329	493096	R	encoded by transcript ACA1_260520A; Bromodomain containing protein	complement(join(488329..488437,488545..488641,488716..488931,489013..489115,489258..489401,489494..489604,489691..489817,489911..490103,490250..490367,490550..490611,490698..490787,490874..490961,491060..491197,491301..491387,491468..491555,491654..491835,491935..492027,492137..492333,492444..492547,492696..492955,493088..493096))	Acanthamoeba castellanii str. Neff	14912038
ACA1_260530	CDS	ACA1_260530	NW_004457268.1	493398	495315	R	encoded by transcript ACA1_260530A; uncharacterized protein	complement(join(493398..493652,493764..493779,493855..494330,494413..494606,494766..494808,494906..494984,495064..495128,495268..495315))	Acanthamoeba castellanii str. Neff	14912050
ACA1_260540	CDS	ACA1_260540	NW_004457268.1	495487	497416	D	encoded by transcript ACA1_260540A; uncharacterized protein	join(495487..495567,495880..495947,496045..496278,496352..496427,496494..496550,496672..496802,496876..496973,497091..497235,497335..497416)	Acanthamoeba castellanii str. Neff	14912156
ACA1_260760	CDS	ACA1_260760	NW_004457268.1	509586	514418	D	encoded by transcript ACA1_260760A; uncharacterized protein	join(509586..509823,509918..510021,510100..510159,510247..510471,510546..510618,510751..510867,511006..511059,511153..511221,511317..511433,511581..511681,511824..511981,512126..512312,512455..512598,512731..514253,514319..514418)	Acanthamoeba castellanii str. Neff	14912126
ACA1_260770	CDS	ACA1_260770	NW_004457268.1	515417	518255	R	encoded by transcript ACA1_260770A; ABC2 type transporter superfamily protein	complement(join(515417..515500,515570..515793,515886..516194,516267..516353,516436..516774,516875..517117,517227..517320,517393..517683,517845..518255))	Acanthamoeba castellanii str. Neff	14912047
ACA1_260780	CDS	ACA1_260780	NW_004457268.1	518649	524903	D	encoded by transcript ACA1_260780A; helicase conserved Cterminal domain containing protein	join(518649..519069,519172..519313,519427..519538,519651..519776,519879..519998,520079..520173,520266..520402,520526..520593,520708..520834,520917..521026,521104..521332,521414..521619,521713..521934,522001..522090,522151..522243,522337..522504,522576..522957,523047..523122,523223..523395,523496..523565,523663..523991,524080..524238,524412..524553,524633..524903)	Acanthamoeba castellanii str. Neff	14911947
ACA1_260790	CDS	ACA1_260790	NW_004457268.1	524979	525958	R	encoded by transcript ACA1_260790A; oxidoreductase, zincbinding dehydrogenase superfamily protein	complement(join(524979..525684,525748..525850,525949..525958))	Acanthamoeba castellanii str. Neff	14911979
ACA1_260800	CDS	ACA1_260800	NW_004457268.1	526606	527712	D	encoded by transcript ACA1_260800A; aflatoxin B1 aldehyde reductase member 2, putative	join(526606..526624,526734..526813,526852..527712)	Acanthamoeba castellanii str. Neff	14911949
ACA1_260810	CDS	ACA1_260810	NW_004457268.1	527843	530875	R	encoded by transcript ACA1_260810A; MYND finger domain containing protein	complement(join(527843..528176,528235..528505,528596..528735,528840..529088,529169..529502,529583..529704,529822..529997,530210..530339,530435..530534,530651..530732,530804..530875))	Acanthamoeba castellanii str. Neff	14911950
ACA1_260830	CDS	ACA1_260830	NW_004457268.1	534369	534863	D	encoded by transcript ACA1_260830A; uncharacterized protein	join(534369..534492,534562..534650,534726..534863)	Acanthamoeba castellanii str. Neff	14912175
ACA1_260850	CDS	ACA1_260850	NW_004457268.1	536520	538094	D	encoded by transcript ACA1_260850A; uncharacterized protein	536520..538094	Acanthamoeba castellanii str. Neff	14911945
ACA1_260860	CDS	ACA1_260860	NW_004457268.1	538687	542468	D	encoded by transcript ACA1_260860A; uncharacterized protein	join(538687..538768,538851..538905,538979..539082,539261..539316,539479..539609,539692..539944,540017..540100,540383..540463,540557..541291,541384..541642,541777..541903,541978..542077,542154..542288,542391..542468)	Acanthamoeba castellanii str. Neff	14911946
ACA1_260870	CDS	ACA1_260870	NW_004457268.1	542613	544287	D	encoded by transcript ACA1_260870A; uncharacterized protein	join(542613..542836,542938..543194,543259..543333,543470..543546,543658..543798,543853..543990,544069..544287)	Acanthamoeba castellanii str. Neff	14912085
ACA1_260880	CDS	ACA1_260880	NW_004457268.1	544600	546895	D	encoded by transcript ACA1_260880A; uncharacterized protein	join(544600..544664,544725..544848,544945..545181,545275..545379,545392..545475,545931..546117,546210..546895)	Acanthamoeba castellanii str. Neff	14911940
ACA1_260890	CDS	ACA1_260890	NW_004457268.1	547310	549395	D	encoded by transcript ACA1_260890A; Fbox domain containing protein	join(547310..548093,548165..548297,548389..548509,548617..548730,548812..548907,548999..549184,549291..549395)	Acanthamoeba castellanii str. Neff	14912198
ACA1_260900	CDS	ACA1_260900	NW_004457268.1	549771	550408	D	encoded by transcript ACA1_260900A; uncharacterized protein	join(549771..549834,549905..550007,550097..550235,550316..550408)	Acanthamoeba castellanii str. Neff	14911936
ACA1_260910	CDS	ACA1_260910	NW_004457268.1	550616	551427	D	encoded by transcript ACA1_260910A; Fbox domain containing protein	join(550616..550711,550845..551111,551176..551252,551322..551427)	Acanthamoeba castellanii str. Neff	14911937
ACA1_260920	CDS	ACA1_260920	NW_004457268.1	551640	552693	D	encoded by transcript ACA1_260920A; ankyrin repeat domain 50, putative	join(551640..551658,551720..551836,551903..552048,552109..552420,552481..552537,552610..552693)	Acanthamoeba castellanii str. Neff	14912015
ACA1_260930	CDS	ACA1_260930	NW_004457268.1	552737	555491	R	encoded by transcript ACA1_260930A; BTB/POZ domain containing protein	complement(join(552737..553104,553188..553274,553360..553536,553653..554060,554151..554239,554358..554449,554556..554668,554738..554881,554992..555165,555257..555491))	Acanthamoeba castellanii str. Neff	14911981
ACA1_260940	CDS	ACA1_260940	NW_004457268.1	555676	559742	D	encoded by transcript ACA1_260940A; RhoGEF domain containing protein	join(555676..556254,556347..556390,556510..556646,556768..556878,556980..557023,557070..557209,557326..557435,557544..557659,557744..557792,557857..557936,558441..558504,558568..559742)	Acanthamoeba castellanii str. Neff	14911982
ACA1_260950	CDS	ACA1_260950	NW_004457268.1	559853	564999	R	encoded by transcript ACA1_260950A; Ribonuclease 25A protein	complement(join(559853..559980,560081..560209,560281..560377,560482..560533,560688..561081,561228..561298,561484..561604,561764..561902,561988..562172,562281..563288,563378..563536,563674..563733,563822..563933,564032..564235,564312..564410,564521..564638,564740..564999))	Acanthamoeba castellanii str. Neff	14911952
ACA1_260960	CDS	ACA1_260960	NW_004457268.1	565233	566406	R	encoded by transcript ACA1_260960A; glutathione transferase family protein	complement(join(565233..565265,565320..565433,565582..565701,565821..565896,565991..566067,566128..566187,566284..566406))	Acanthamoeba castellanii str. Neff	14911987
ACA1_260970	CDS	ACA1_260970	NW_004457268.1	567078	568492	D	encoded by transcript ACA1_260970A; cyclin, Nterminal domain containing protein	join(567078..567199,567278..567482,567577..567694,567809..568012,568073..568190,568293..568314,568385..568492)	Acanthamoeba castellanii str. Neff	14912117
ACA1_260980	CDS	ACA1_260980	NW_004457268.1	568409	569967	R	encoded by transcript ACA1_260980A; 2dehydropantoate 2-reductase subfamily protein	complement(join(568409..568637,568725..568795,568924..569477,569559..569640,569740..569967))	Acanthamoeba castellanii str. Neff	14911970
ACA1_260990	CDS	ACA1_260990	NW_004457268.1	570037	572452	R	encoded by transcript ACA1_260990A; prolylcarboxypeptidase isoform 2 preproprotein	complement(join(570037..570162,570227..570294,570385..570455,570526..570635,570727..570781,570852..570996,571065..571280,571350..571433,571507..571592,571698..571839,571948..572062,572150..572452))	Acanthamoeba castellanii str. Neff	14911971
ACA1_261000	CDS	ACA1_261000	NW_004457268.1	573012	579541	R	encoded by transcript ACA1_261000A; phosphate ABC transporter, phosphatebinding protein PstS, putative	complement(join(573012..573422,573482..573687,573782..574231,574330..574586,574688..575404,575502..575695,575795..575856,575959..576103,576150..576266,576336..576852,576919..577202,577288..577598,577683..578104,578267..578580,578650..578961,579035..579227,579249..579309,579448..579541))	Acanthamoeba castellanii str. Neff	14912101
ACA1_261010	CDS	ACA1_261010	NW_004457268.1	580407	582088	D	encoded by transcript ACA1_261010A; Transcription initiation factor IID, 18kD subunit	join(580407..580499,580594..580789,580903..580997,581084..581158,581305..581400,581521..581580,581658..581720,581798..581887,581966..582088)	Acanthamoeba castellanii str. Neff	14912154
ACA1_261030	CDS	ACA1_261030	NW_004457268.1	583530	586011	R	encoded by transcript ACA1_261030A; uncharacterized protein	complement(join(583530..583841,583947..584175,584278..584370,584496..584699,584821..584913,585015..585334,585584..585674,585773..586011))	Acanthamoeba castellanii str. Neff	14912035
ACA1_261040	CDS	ACA1_261040	NW_004457268.1	586434	589788	D	encoded by transcript ACA1_261040A; uncharacterized protein	join(586434..586505,586597..586683,586858..586990,587106..587267,587393..587697,587771..587899,587990..588110,588210..588313,588416..588524,588625..588783,588870..589204,589343..589424,589514..589579,589664..589788)	Acanthamoeba castellanii str. Neff	14912036
ACA1_261050	CDS	ACA1_261050	NW_004457268.1	590296	591831	D	encoded by transcript ACA1_261050A; nodulin 21 family protein	join(590296..590311,590415..590512,590649..590717,590884..591011,591126..591300,591424..591571,591680..591831)	Acanthamoeba castellanii str. Neff	14912142
ACA1_261060	CDS	ACA1_261060	NW_004457268.1	592055	593718	R	encoded by transcript ACA1_261060A; lipase, putative	complement(join(592055..592221,592360..592467,592579..592694,592780..592882,593026..593146,593249..593366,593436..593577,593682..593718))	Acanthamoeba castellanii str. Neff	14912092
ACA1_261070	CDS	ACA1_261070	NW_004457268.1	594666	595818	D	encoded by transcript ACA1_261070A; three prime histone mRNA exonuclease 1, putative	join(594666..594877,594991..595169,595318..595595,595717..595818)	Acanthamoeba castellanii str. Neff	14911996
ACA1_261080	CDS	ACA1_261080	NW_004457268.1	596048	597686	R	encoded by transcript ACA1_261080A; MIT domain containing protein	complement(join(596048..596122,596227..596349,596428..596583,596659..596794,596894..597038,597139..597263,597346..597448,597548..597686))	Acanthamoeba castellanii str. Neff	14912130
ACA1_261090	CDS	ACA1_261090	NW_004457268.1	598054	602516	R	encoded by transcript ACA1_261090A; uncharacterized protein	complement(join(598054..599235,599384..599909,600037..600257,600268..602009,602105..602516))	Acanthamoeba castellanii str. Neff	14911972
ACA1_261200	CDS	ACA1_261200	NW_004457268.1	603359	604158	D	encoded by transcript ACA1_261200A; Ubiquitinconjugating enzyme subfamily protein	join(603359..603647,603743..604158)	Acanthamoeba castellanii str. Neff	14911988
ACA1_261210	CDS	ACA1_261210	NW_004457268.1	604395	606701	D	encoded by transcript ACA1_261210A; F-box domain containing protein	join(604395..604655,604760..604840,604957..605214,605321..605381,605462..605525,605603..605712,605869..605933,605949..606083,606265..606355,606487..606701)	Acanthamoeba castellanii str. Neff	14911989
ACA1_261220	CDS	ACA1_261220	NW_004457268.1	606825	609363	R	encoded by transcript ACA1_261220A; SWIB/MDM2 domain containing protein	complement(join(606825..606869,606982..607097,607181..607280,607432..607543,607663..607823,607966..608166,608335..608454,608568..608627,608746..608817,608931..609056,609131..609179,609251..609363))	Acanthamoeba castellanii str. Neff	14912046
ACA1_261230	CDS	ACA1_261230	NW_004457268.1	609461	610050	R	encoded by transcript ACA1_261230A; uncharacterized protein	complement(join(609461..609730,609796..610050))	Acanthamoeba castellanii str. Neff	14912044
ACA1_261240	CDS	ACA1_261240	NW_004457268.1	610222	614641	R	encoded by transcript ACA1_261240A; serine/threonine protein kinase	complement(join(610222..610339,610411..610498,610509..610528,610551..610861,611025..611136,611204..611462,611527..611590,611639..611931,612008..612146,612217..612324,612450..613041,613122..613315,613326..613439,613584..613898,614010..614144,614226..614283,614364..614460,614563..614641))	Acanthamoeba castellanii str. Neff	14911973
ACA1_261260	CDS	ACA1_261260	NW_004457268.1	622643	625458	R	encoded by transcript ACA1_261260A; FGGAP repeat domain containing protein	complement(join(622643..622648,622688..622806,622917..623037,623115..623173,623245..623361,623444..623674,623753..623919,624062..624235,624298..624625,624696..624876,624963..625004,625079..625194,625299..625458))	Acanthamoeba castellanii str. Neff	14912042
ACA1_261270	CDS	ACA1_261270	NW_004457268.1	625554	626582	D	encoded by transcript ACA1_261270A; methyltransferase domain containing protein	join(625554..625859,625927..626028,626121..626283,626402..626525,626561..626582)	Acanthamoeba castellanii str. Neff	14912043
ACA1_261280	CDS	ACA1_261280	NW_004457268.1	626738	628356	R	encoded by transcript ACA1_261280A; uncharacterized protein	complement(join(626738..627114,627186..627357,627379..627422,627499..627637,627735..627899,628038..628183,628290..628356))	Acanthamoeba castellanii str. Neff	14912168
ACA1_261300	CDS	ACA1_261300	NW_004457268.1	630486	633053	R	encoded by transcript ACA1_261300A; Fbox domain containing protein	complement(join(630486..631073,631164..631346,631379..631539,631637..631735,631817..631970,632073..632219,632363..632526,632645..632897,632985..633053))	Acanthamoeba castellanii str. Neff	14912195
ACA1_261310	CDS	ACA1_261310	NW_004457268.1	633288	635234	D	encoded by transcript ACA1_261310A; Phytanoyl-CoA dioxygenase family protein	join(633288..633515,633626..633748,633848..634047,634120..634216,634315..634530,634634..634796,634921..635234)	Acanthamoeba castellanii str. Neff	14912169
ACA1_261320	CDS	ACA1_261320	NW_004457268.1	636061	638132	R	encoded by transcript ACA1_261320A; serine palmitoyltransferase, long chain base subunit 2, putative	complement(join(636061..636103,636174..636304,636393..636551,636631..636927,636989..637152,637230..637323,637389..637513,637581..637884,637965..638132))	Acanthamoeba castellanii str. Neff	14911953
ACA1_261330	CDS	ACA1_261330	NW_004457268.1	638957	639402	D	encoded by transcript ACA1_261330A; uncharacterized protein	join(638957..639103,639202..639402)	Acanthamoeba castellanii str. Neff	14911954
ACA1_261340	CDS	ACA1_261340	NW_004457268.1	639521	640207	R	encoded by transcript ACA1_261340A; uncharacterized protein	complement(join(639521..640126,640151..640207))	Acanthamoeba castellanii str. Neff	14912018
ACA1_261350	CDS	ACA1_261350	NW_004457268.1	642239	643471	D	encoded by transcript ACA1_261350A; BTB/POZ domain containing protein	642239..643471	Acanthamoeba castellanii str. Neff	14912176
ACA1_261360	CDS	ACA1_261360	NW_004457268.1	643539	645282	R	encoded by transcript ACA1_261360A; 2OGFe(II) oxygenase family oxidoreductase	complement(join(643539..643746,643823..643989,644072..644131,644274..644417,644514..644689,644982..645282))	Acanthamoeba castellanii str. Neff	14912177
ACA1_261370	CDS	ACA1_261370	NW_004457268.1	645450	653969	D	encoded by transcript ACA1_261370A; regulator of chromosome condensation (RCC1) repeat domain containing protein	join(645450..645771,645867..645914,646034..646211,646306..646356,646473..646548,646633..646762,646841..646968,647081..647297,647391..647532,647747..647915,648003..648071,648188..648345,648434..648546,648604..648695,648823..648930,649021..649116,649279..649443,649543..649610,649701..649794,649931..650033,650119..650171,650249..650342,650449..650610,650707..650862,650946..651148,651254..651362,651441..651531,651616..651712,651784..651850,651963..652129,652237..652315,652428..652546,652646..652840,652947..653157,653261..653328,653450..653545,653638..653787,653922..653969)	Acanthamoeba castellanii str. Neff	14911999
ACA1_261380	CDS	ACA1_261380	NW_004457268.1	654226	655050	R	encoded by transcript ACA1_261380A; GATA zinc finger domain containing protein	complement(join(654226..654523,654598..654631,654723..655050))	Acanthamoeba castellanii str. Neff	14911978
ACA1_261390	CDS	ACA1_261390	NW_004457268.1	655927	657540	D	encoded by transcript ACA1_261390A; BTB/POZ domain containing protein	join(655927..656079,656145..656279,656401..656715,656763..656823,656940..657038,657159..657292,657445..657540)	Acanthamoeba castellanii str. Neff	14912106
ACA1_261400	CDS	ACA1_261400	NW_004457268.1	657702	663962	R	encoded by transcript ACA1_261400A; serine/threonine protein kinase, putative	complement(join(657702..658708,658786..659762,659871..660250,660346..660462,660527..660786,660857..661113,661174..661324,661388..661523,661598..661741,661844..662085,662154..662506,662618..662931,663024..663332,663441..663581,663696..663756,663877..>663962))	Acanthamoeba castellanii str. Neff	14912083
ACA1_261410	CDS	ACA1_261410	NW_004457268.1	664782	669233	D	encoded by transcript ACA1_261410A; ubiquitinlike modifier activating enzyme 1, putative	join(664782..665024,665204..665338,665394..665600,665693..665876,665951..666051,666131..666667,666762..667244,667319..667601,667854..667988,668076..668336,668424..668785,668886..669026,669138..669233)	Acanthamoeba castellanii str. Neff	14912084
ACA1_261420	CDS	ACA1_261420	NW_004457268.1	669688	671637	D	encoded by transcript ACA1_261420A; TBC domain containing protein	join(669688..669779,669864..669969,670128..670238,670339..670467,670719..670859,671182..671295,671411..671515,671566..671637)	Acanthamoeba castellanii str. Neff	14912077
ACA1_261430	CDS	ACA1_261430	NW_004457268.1	672416	678997	D	encoded by transcript ACA1_261430A; serine/threonine protein kinase, putative	join(672416..672488,672584..672686,672769..672829,672925..673059,673232..673543,673639..673952,674038..674387,674467..674861,674944..675112,675188..675335,675422..675666,675780..676039,676132..676248,676355..676513,676596..676795,676948..677728,677897..678997)	Acanthamoeba castellanii str. Neff	14911975
ACA1_261440	CDS	ACA1_261440	NW_004457268.1	679265	683101	R	encoded by transcript ACA1_261440A; Poly(ADPribose) polymerase catalytic domain containing protein	complement(join(679265..679377,679488..679608,679682..679779,679882..679961,680047..680135,680284..680364,680458..680550,680643..680917,681044..681215,681332..681742,681833..682009,682156..682218,682326..682495,682577..682652,682762..682916,683047..683101))	Acanthamoeba castellanii str. Neff	14911976
ACA1_261450	CDS	ACA1_261450	NW_004457268.1	683284	686810	R	encoded by transcript ACA1_261450A; TrkA Cterminal domain containing protein	complement(join(683284..683377,683490..683743,683826..683946,684045..684426,684560..684647,684720..684851,684945..685049,685149..685268,685450..685499,685628..685744,685826..685915,685994..686155,686285..686810))	Acanthamoeba castellanii str. Neff	14912013
ACA1_261460	CDS	ACA1_261460	NW_004457268.1	687041	688519	R	encoded by transcript ACA1_261460A; Leucine Rich Repeatcontaining protein	complement(join(687041..687172,687294..687389,687461..687511,687594..687742,687840..687905,688057..688177,688269..688309,688435..688519))	Acanthamoeba castellanii str. Neff	14912105
ACA1_261470	CDS	ACA1_261470	NW_004457268.1	688892	689547	D	encoded by transcript ACA1_261470A; uncharacterized protein	join(688892..688960,689044..689169,689256..689372,689476..689547)	Acanthamoeba castellanii str. Neff	14912017
ACA1_261480	CDS	ACA1_261480	NW_004457268.1	689757	691276	D	encoded by transcript ACA1_261480A; carbohydrate kinase protein	join(689757..690058,690151..690246,690360..690492,690588..690682,690766..690827,690913..691021,691099..691276)	Acanthamoeba castellanii str. Neff	14912076
ACA1_261490	CDS	ACA1_261490	NW_004457268.1	691721	693103	R	encoded by transcript ACA1_261490A; uncharacterized protein	complement(691721..693103)	Acanthamoeba castellanii str. Neff	14912031
ACA1_261500	CDS	ACA1_261500	NW_004457268.1	694121	695311	R	encoded by transcript ACA1_261500A; SAM domain (Sterile alpha motif) domain containing protein	complement(694121..695311)	Acanthamoeba castellanii str. Neff	14912032
ACA1_261510	CDS	ACA1_261510	NW_004457268.1	695890	697192	R	encoded by transcript ACA1_261510A; uncharacterized protein	complement(join(695890..696047,696167..696473,696590..696717,696871..697192))	Acanthamoeba castellanii str. Neff	14911963
ACA1_261520	CDS	ACA1_261520	NW_004457268.1	697330	697698	R	encoded by transcript ACA1_261520A; uncharacterized protein	complement(join(697330..697392,697490..697569,697653..697698))	Acanthamoeba castellanii str. Neff	14911964
ACA1_261530	CDS	ACA1_261530	NW_004457268.1	698694	700620	D	encoded by transcript ACA1_261530A; uncharacterized protein	join(698694..699249,699276..699583,699651..699914,699985..700149,700211..700427,700499..700620)	Acanthamoeba castellanii str. Neff	14911962
ACA1_261540	CDS	ACA1_261540	NW_004457268.1	701213	702435	D	encoded by transcript ACA1_261540A; RNA pseudouridine synthase superfamily protein	join(701213..701254,701317..702435)	Acanthamoeba castellanii str. Neff	14912173
ACA1_261550	CDS	ACA1_261550	NW_004457268.1	702512	704124	D	encoded by transcript ACA1_261550A; Sel1 repeat-containing protein	join(702512..702944,703019..703071,703168..703285,703405..703512,703575..703717,703794..703872,703973..704124)	Acanthamoeba castellanii str. Neff	14912174
ACA1_261560	CDS	ACA1_261560	NW_004457268.1	704271	704768	D	encoded by transcript ACA1_261560A; uncharacterized protein	704271..704768	Acanthamoeba castellanii str. Neff	14912023
ACA1_261570	CDS	ACA1_261570	NW_004457268.1	705174	706818	R	encoded by transcript ACA1_261570A; Sec7 domain containing protein	complement(join(705174..705445,705555..705662,705773..705917,706020..706099,706178..706277,706371..706609,706683..706818))	Acanthamoeba castellanii str. Neff	14912024
ACA1_261600	CDS	ACA1_261600	NW_004457268.1	720711	722084	R	encoded by transcript ACA1_261600A; zinc finger, C3HC4 type (RING finger) domain containing protein	complement(join(720711..720783,720880..720969,721055..721167,721255..721415,721516..721613,721714..722084))	Acanthamoeba castellanii str. Neff	14912059
ACA1_261610	CDS	ACA1_261610	NW_004457268.1	722785	723577	D	encoded by transcript ACA1_261610A; Ubox domain containing protein	join(722785..723104,723199..723577)	Acanthamoeba castellanii str. Neff	14912060
ACA1_261620	CDS	ACA1_261620	NW_004457268.1	723797	724359	R	encoded by transcript ACA1_261620A; uncharacterized protein	complement(join(723797..724022,724115..724359))	Acanthamoeba castellanii str. Neff	14912103
ACA1_261630	CDS	ACA1_261630	NW_004457268.1	724953	725629	D	encoded by transcript ACA1_261630A; uncharacterized protein	join(724953..725125,725248..725424,725512..725629)	Acanthamoeba castellanii str. Neff	14912134
ACA1_261640	CDS	ACA1_261640	NW_004457268.1	725771	728887	D	encoded by transcript ACA1_261640A; methyltransferase domain containing protein	join(725771..726059,726219..726314,726414..727913,728005..728054,728156..728472,728590..728686,728780..728887)	Acanthamoeba castellanii str. Neff	14912135
ACA1_261650	CDS	ACA1_261650	NW_004457268.1	729001	730374	R	encoded by transcript ACA1_261650A; helicase conserved Cterminal domain containing protein	complement(join(729001..729111,729135..729205,729283..729409,729600..729711,729830..729931,730058..730174,730265..730374))	Acanthamoeba castellanii str. Neff	14911948
ACA1_027150	CDS	ACA1_027150	NW_004457267.1	485	844	R	encoded by transcript ACA1_027150A; uncharacterized protein	complement(485..844)	Acanthamoeba castellanii str. Neff	14911935
ACA1_027160	CDS	ACA1_027160	NW_004457267.1	1005	4034	D	encoded by transcript ACA1_027160A; uncharacterized protein	join(1005..1558,1740..1843,1955..2566,2659..2956,3046..3211,3275..3361,3456..3553,3653..3817,3912..>4034)	Acanthamoeba castellanii str. Neff	14911934
ACA1_027270	CDS	ACA1_027270	NW_004457267.1	8566	9546	R	encoded by transcript ACA1_027270A; uncharacterized protein	complement(join(8566..8783,8866..8949,9043..9154,9235..9546))	Acanthamoeba castellanii str. Neff	14911933
ACA1_027280	CDS	ACA1_027280	NW_004457267.1	9719	10691	D	encoded by transcript ACA1_027280A; uncharacterized protein	join(9719..9812,9887..10065,10620..10691)	Acanthamoeba castellanii str. Neff	14911931
ACA1_027390	CDS	ACA1_027390	NW_004457267.1	10814	11141	R	encoded by transcript ACA1_027390A; uncharacterized protein	complement(join(<10814..11019,11107..>11141))	Acanthamoeba castellanii str. Neff	14911932
ACA1_032200	CDS	ACA1_032200	NW_004457266.1	5720	6695	D	encoded by transcript ACA1_032200A; LIM domain containing protein	join(5720..5858,5930..6085,6200..6320,6620..6695)	Acanthamoeba castellanii str. Neff	14911928
ACA1_032210	CDS	ACA1_032210	NW_004457266.1	6863	7648	R	encoded by transcript ACA1_032210A; dioxygenase, putative	complement(join(6863..7064,7207..7624,7645..7648))	Acanthamoeba castellanii str. Neff	14911929
ACA1_032320	CDS	ACA1_032320	NW_004457266.1	12434	14186	R	encoded by transcript ACA1_032320A; NAD dependent epimerase/dehydratase superfamily protein	complement(join(12434..12589,12653..12744,12801..12927,13022..13056,13123..13197,13245..13328,13756..13827,13884..13967,14051..14186))	Acanthamoeba castellanii str. Neff	14911930
ACA1_032330	CDS	ACA1_032330	NW_004457266.1	14344	14658	D	encoded by transcript ACA1_032330A; uncharacterized protein	join(14344..14491,14576..>14658)	Acanthamoeba castellanii str. Neff	14911927
ACA1_121120	CDS	ACA1_121120	NW_004457265.1	119	797	R	encoded by transcript ACA1_121120A; uncharacterized protein	complement(join(<119..280,390..>797))	Acanthamoeba castellanii str. Neff	14911923
ACA1_121230	CDS	ACA1_121230	NW_004457265.1	7161	8355	R	encoded by transcript ACA1_121230A; uncharacterized protein	complement(join(7161..7175,7188..7268,7339..7446,7525..7758,7882..8355))	Acanthamoeba castellanii str. Neff	14911917
ACA1_121240	CDS	ACA1_121240	NW_004457265.1	9210	11160	R	encoded by transcript ACA1_121240A; phosphatidylinositol Nacetylglucosaminyltransferase subunit c, putative	complement(join(9210..9279,9363..9529,9650..9797,9909..10095,10191..10327,10403..10469,10609..10705,10873..11160))	Acanthamoeba castellanii str. Neff	14911904
ACA1_121250	CDS	ACA1_121250	NW_004457265.1	11382	13882	R	encoded by transcript ACA1_121250A; uncharacterized protein	complement(join(11382..11525,11652..11791,11908..12061,12133..12197,12302..12450,12542..12668,12743..12877,12984..13257,13346..13552,13673..13882))	Acanthamoeba castellanii str. Neff	14911915
ACA1_121260	CDS	ACA1_121260	NW_004457265.1	14378	18834	D	encoded by transcript ACA1_121260A; Ankyrin repeat containing serine/threonine kinase	join(14378..15265,15405..15554,15651..15905,15989..16078,16169..16813,16912..17542,17610..17691,17920..18052,18138..18200,18271..18373,18467..18636,18736..18834)	Acanthamoeba castellanii str. Neff	14911916
ACA1_121270	CDS	ACA1_121270	NW_004457265.1	19008	24569	D	encoded by transcript ACA1_121270A; HEAT repeat domain containing protein	join(19008..19091,19169..19637,19727..19878,19972..20060,20167..20405,20525..20640,20718..20787,20860..21017,21108..21208,21285..21364,21454..21606,21700..21779,21850..22078,22149..22258,22353..22508,22588..23268,23329..23440,23527..23606,23733..24042,24129..24375,24461..24569)	Acanthamoeba castellanii str. Neff	14911862
ACA1_121280	CDS	ACA1_121280	NW_004457265.1	24971	25437	R	encoded by transcript ACA1_121280A; uncharacterized protein	complement(join(24971..25153,25258..25437))	Acanthamoeba castellanii str. Neff	14911865
ACA1_121290	CDS	ACA1_121290	NW_004457265.1	25781	26524	R	encoded by transcript ACA1_121290A; uncharacterized protein	complement(join(25781..26016,26050..26175,26227..26524))	Acanthamoeba castellanii str. Neff	14911895
ACA1_121300	CDS	ACA1_121300	NW_004457265.1	26705	27736	R	encoded by transcript ACA1_121300A; uncharacterized protein	complement(join(26705..26856,26991..27116,27150..27257,27628..27736))	Acanthamoeba castellanii str. Neff	14911896
ACA1_121310	CDS	ACA1_121310	NW_004457265.1	29741	29986	R	encoded by transcript ACA1_121310A; uncharacterized protein	complement(29741..29986)	Acanthamoeba castellanii str. Neff	14911907
ACA1_121320	CDS	ACA1_121320	NW_004457265.1	33399	33824	D	encoded by transcript ACA1_121320A; uncharacterized protein	33399..33824	Acanthamoeba castellanii str. Neff	14911898
ACA1_121430	CDS	ACA1_121430	NW_004457265.1	36203	36760	R	encoded by transcript ACA1_121430A; uncharacterized protein	complement(join(36203..36295,36353..36760))	Acanthamoeba castellanii str. Neff	14911899
ACA1_121440	CDS	ACA1_121440	NW_004457265.1	37238	38597	D	encoded by transcript ACA1_121440A; uncharacterized protein	join(37238..38050,38583..38597)	Acanthamoeba castellanii str. Neff	14911870
ACA1_121450	CDS	ACA1_121450	NW_004457265.1	39394	40089	R	encoded by transcript ACA1_121450A; uncharacterized protein	complement(39394..40089)	Acanthamoeba castellanii str. Neff	14911871
ACA1_121470	CDS	ACA1_121470	NW_004457265.1	41956	42820	R	encoded by transcript ACA1_121470A; uncharacterized protein	complement(join(41956..41974,42000..42820))	Acanthamoeba castellanii str. Neff	14911885
ACA1_121480	CDS	ACA1_121480	NW_004457265.1	45489	47676	R	encoded by transcript ACA1_121480A; uncharacterized protein	complement(join(45489..45547,45898..47395,47455..47676))	Acanthamoeba castellanii str. Neff	14911874
ACA1_121490	CDS	ACA1_121490	NW_004457265.1	48468	50863	R	encoded by transcript ACA1_121490A; uncharacterized protein	complement(join(48468..48850,49074..49234,49388..49565,49856..50131,50809..50863))	Acanthamoeba castellanii str. Neff	14911875
ACA1_121500	CDS	ACA1_121500	NW_004457265.1	51353	53332	D	encoded by transcript ACA1_121500A; NADH:flavin oxidoreductase/NADH oxidase	join(51353..51597,51720..51862,51946..52053,52200..52251,52333..52406,52505..52629,52738..52931,53023..53332)	Acanthamoeba castellanii str. Neff	14911890
ACA1_121510	CDS	ACA1_121510	NW_004457265.1	53439	54374	D	encoded by transcript ACA1_121510A; tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, putative	join(53439..53860,53949..54058,54121..54374)	Acanthamoeba castellanii str. Neff	14911888
ACA1_121520	CDS	ACA1_121520	NW_004457265.1	54573	55718	D	encoded by transcript ACA1_121520A; charged multivesicular body protein 2a 2 family protein	join(54573..54612,54677..54807,54880..54984,55095..55718)	Acanthamoeba castellanii str. Neff	14911889
ACA1_121530	CDS	ACA1_121530	NW_004457265.1	55921	56562	D	encoded by transcript ACA1_121530A; tyrosine phosphatase	55921..56562	Acanthamoeba castellanii str. Neff	14911911
ACA1_121540	CDS	ACA1_121540	NW_004457265.1	56734	58491	D	encoded by transcript ACA1_121540A; peptidase family m1 protein	join(56734..56845,56885..57107,57175..57295,57368..57476,57562..57609,57686..57790,57864..57920,57995..58089,58162..58242,58342..58491)	Acanthamoeba castellanii str. Neff	14911925
ACA1_121550	CDS	ACA1_121550	NW_004457265.1	58592	59021	D	encoded by transcript ACA1_121550A; aminopeptidase	join(58592..58621,58707..59021)	Acanthamoeba castellanii str. Neff	14911926
ACA1_121560	CDS	ACA1_121560	NW_004457265.1	59074	61824	D	encoded by transcript ACA1_121560A; aminopeptidase N, putative	join(59074..59259,59317..59474,59555..59639,59729..59811,59892..60018,60160..60232,60417..60580,60668..60719,60796..60925,61040..61173,61319..61518,61642..61824)	Acanthamoeba castellanii str. Neff	14911891
ACA1_121570	CDS	ACA1_121570	NW_004457265.1	62059	65710	R	encoded by transcript ACA1_121570A; uncharacterized protein	complement(join(62059..62122,62289..63428,63511..63573,63678..65154,65278..65710))	Acanthamoeba castellanii str. Neff	14911922
ACA1_121580	CDS	ACA1_121580	NW_004457265.1	66120	67761	R	encoded by transcript ACA1_121580A; DHHC zinc finger domain containing protein	complement(join(66120..66147,66354..66483,66569..66683,66819..66907,66980..67008,67113..67161,67254..67347,67573..67761))	Acanthamoeba castellanii str. Neff	14911876
ACA1_121590	CDS	ACA1_121590	NW_004457265.1	69825	70507	D	encoded by transcript ACA1_121590A; uncharacterized protein	join(69825..69867,69950..70002,70280..70507)	Acanthamoeba castellanii str. Neff	14911903
ACA1_121600	CDS	ACA1_121600	NW_004457265.1	70687	72494	R	encoded by transcript ACA1_121600A; DHHC zinc finger domain containing protein	complement(join(70687..70717,71080..71209,71295..71409,71503..71633,71714..71742,71845..71893,71985..72078,72156..72188,72306..72494))	Acanthamoeba castellanii str. Neff	14911866
ACA1_121710	CDS	ACA1_121710	NW_004457265.1	73375	75272	D	encoded by transcript ACA1_121710A; C2 domain containing protein	join(73375..73510,73592..73724,74008..74203,74217..74534,74655..75272)	Acanthamoeba castellanii str. Neff	14911867
ACA1_121720	CDS	ACA1_121720	NW_004457265.1	75768	78607	R	encoded by transcript ACA1_121720A; glycoside hydrolase family protein	complement(join(75768..75997,76091..76173,76246..76400,76695..76860,76980..77074,77160..77278,77351..77439,77523..77625,77821..77891,77968..78008,78026..78036,78132..78249,78344..78607))	Acanthamoeba castellanii str. Neff	14911860
ACA1_121740	CDS	ACA1_121740	NW_004457265.1	84106	85384	D	encoded by transcript ACA1_121740A; Ser/Thr phosphatase family superfamily protein	join(84106..84472,84559..84654,84717..84888,84964..85191,85282..85384)	Acanthamoeba castellanii str. Neff	14911924
ACA1_121750	CDS	ACA1_121750	NW_004457265.1	85739	89393	D	encoded by transcript ACA1_121750A; uncharacterized protein	join(85739..86243,86360..86400,86481..86834,86920..87088,87169..87297,87412..87529,87634..87785,87918..88158,88234..88836,88965..89146,89260..89393)	Acanthamoeba castellanii str. Neff	14911909
ACA1_121760	CDS	ACA1_121760	NW_004457265.1	90239	91343	D	encoded by transcript ACA1_121760A; B-box zinc finger family protein	join(90239..90392,90475..91343)	Acanthamoeba castellanii str. Neff	14911910
ACA1_121770	CDS	ACA1_121770	NW_004457265.1	91526	92146	R	encoded by transcript ACA1_121770A; uncharacterized protein	complement(91526..92146)	Acanthamoeba castellanii str. Neff	14911900
ACA1_121780	CDS	ACA1_121780	NW_004457265.1	92904	96389	D	encoded by transcript ACA1_121780A; RNA-directed RNA polymerase	join(92904..93181,93260..96389)	Acanthamoeba castellanii str. Neff	14911921
ACA1_121790	CDS	ACA1_121790	NW_004457265.1	96802	97577	D	encoded by transcript ACA1_121790A; uncharacterized protein	join(96802..96914,97002..97165,97256..97327,97399..97491,97537..97577)	Acanthamoeba castellanii str. Neff	14911877
ACA1_121810	CDS	ACA1_121810	NW_004457265.1	101992	102417	D	encoded by transcript ACA1_121810A; uncharacterized protein	101992..102417	Acanthamoeba castellanii str. Neff	14911905
ACA1_121830	CDS	ACA1_121830	NW_004457265.1	103551	105851	R	encoded by transcript ACA1_121830A; carboxylesterase superfamily protein	complement(join(103551..103764,103853..104007,104119..104475,104556..104699,104805..105033,105126..105394,105525..105851))	Acanthamoeba castellanii str. Neff	14911872
ACA1_121840	CDS	ACA1_121840	NW_004457265.1	106470	112403	D	encoded by transcript ACA1_121840A; serine/threonine kinase	join(106470..106631,106832..106881,106966..107215,107286..107385,107426..108049,108142..108254,108323..108547,108610..108868,109067..109160,109231..109297,109450..109790,109871..109976,110050..110166,110269..110630,110690..111243,111303..111596,111681..111789,111964..112287,112370..112403)	Acanthamoeba castellanii str. Neff	14911873
ACA1_121950	CDS	ACA1_121950	NW_004457265.1	112721	113020	D	encoded by transcript ACA1_121950A; uncharacterized protein	112721..113020	Acanthamoeba castellanii str. Neff	14911859
ACA1_121960	CDS	ACA1_121960	NW_004457265.1	113322	113689	R	encoded by transcript ACA1_121960A; uncharacterized protein	complement(join(113322..113551,113647..>113689))	Acanthamoeba castellanii str. Neff	14911894
ACA1_122070	CDS	ACA1_122070	NW_004457265.1	115222	115746	D	encoded by transcript ACA1_122070A; uncharacterized protein	115222..115746	Acanthamoeba castellanii str. Neff	14911892
ACA1_122080	CDS	ACA1_122080	NW_004457265.1	115938	118586	D	encoded by transcript ACA1_122080A; uncharacterized protein	join(115938..116566,116689..116799,116887..116945,117048..117132,117222..117342,117434..117554,117638..117767,117846..117928,118025..118100,118171..118255,118334..118432,118524..118586)	Acanthamoeba castellanii str. Neff	14911893
ACA1_122190	CDS	ACA1_122190	NW_004457265.1	119031	119323	R	encoded by transcript ACA1_122190A; uncharacterized protein	complement(join(119031..119126,119249..119323))	Acanthamoeba castellanii str. Neff	14911914
ACA1_122300	CDS	ACA1_122300	NW_004457265.1	120062	121691	D	encoded by transcript ACA1_122300A; tetratricopeptide repeat domain containing protein	join(120062..120150,120218..120386,120492..120565,120675..120793,120866..120935,121011..121087,121168..121241,121369..121471,121558..121691)	Acanthamoeba castellanii str. Neff	14911912
ACA1_122310	CDS	ACA1_122310	NW_004457265.1	121804	122717	D	encoded by transcript ACA1_122310A; uncharacterized protein	join(<121804..121956,122052..122246,122401..122482,122587..122717)	Acanthamoeba castellanii str. Neff	14911913
ACA1_122320	CDS	ACA1_122320	NW_004457265.1	122753	123318	D	encoded by transcript ACA1_122320A; uncharacterized protein	join(122753..122826,122938..123005,123122..123318)	Acanthamoeba castellanii str. Neff	14911920
ACA1_122330	CDS	ACA1_122330	NW_004457265.1	123417	124833	D	encoded by transcript ACA1_122330A; uncharacterized protein	join(123417..123450,123616..123698,123763..123921,123991..124042,124274..124399,124470..124541,124629..124703,124784..124833)	Acanthamoeba castellanii str. Neff	14911886
ACA1_122350	CDS	ACA1_122350	NW_004457265.1	129088	129891	R	encoded by transcript ACA1_122350A; uncharacterized protein	complement(join(129088..129159,129210..129255,129272..129679,129749..129891))	Acanthamoeba castellanii str. Neff	14911879
ACA1_122360	CDS	ACA1_122360	NW_004457265.1	130798	134648	D	encoded by transcript ACA1_122360A; leucine rich repeat domain containing protein	join(130798..131652,131776..131950,132031..132071,132151..132586,132699..132823,132902..133090,133119..133145,133188..133346,133450..133578,133645..133754,133954..134068,134133..134648)	Acanthamoeba castellanii str. Neff	14911880
ACA1_122370	CDS	ACA1_122370	NW_004457265.1	134783	135919	R	encoded by transcript ACA1_122370A; Short chain oxidoreductase	complement(join(134783..134875,134967..135028,135113..135235,135314..135651,135662..135759,135839..135919))	Acanthamoeba castellanii str. Neff	14911897
ACA1_122380	CDS	ACA1_122380	NW_004457265.1	136636	143189	D	encoded by transcript ACA1_122380A; serine/threonine kinase	join(136636..136687,136765..137113,137267..137513,137595..138080,138180..138303,138408..138703,138797..138960,139036..139052,139212..139402,139490..139700,139774..139934,140021..140143,140222..140338,140433..140591,140670..140869,140964..141650,141758..142017,142119..142558,142765..142980,143079..143189)	Acanthamoeba castellanii str. Neff	14911868
ACA1_122700	CDS	ACA1_122700	NW_004457265.1	148811	151140	D	encoded by transcript ACA1_122700A; amine oxidase, flavincontaining superfamily protein	join(148811..148861,148955..149104,149185..149261,149374..149452,149548..149765,149858..150085,150164..150252,150321..150457,150563..150704,150779..150935,151017..151140)	Acanthamoeba castellanii str. Neff	14911918
ACA1_122710	CDS	ACA1_122710	NW_004457265.1	151672	152458	R	encoded by transcript ACA1_122710A; uncharacterized protein	complement(join(151672..151823,151898..152090,152173..152307,152381..152458))	Acanthamoeba castellanii str. Neff	14911919
ACA1_122720	CDS	ACA1_122720	NW_004457265.1	154069	154500	R	encoded by transcript ACA1_122720A; uncharacterized protein	complement(154069..154500)	Acanthamoeba castellanii str. Neff	14911861
ACA1_122730	CDS	ACA1_122730	NW_004457265.1	154613	154948	D	encoded by transcript ACA1_122730A; uncharacterized protein	154613..154948	Acanthamoeba castellanii str. Neff	14911901
ACA1_122740	CDS	ACA1_122740	NW_004457265.1	155006	156640	D	encoded by transcript ACA1_122740A; uncharacterized protein	join(155006..155308,155424..156251,156277..156464,156475..156640)	Acanthamoeba castellanii str. Neff	14911902
ACA1_122760	CDS	ACA1_122760	NW_004457265.1	159265	161070	D	encoded by transcript ACA1_122760A; Xylosyltransferase	join(159265..159381,159521..159733,159808..159990,160078..160330,160404..160503,160578..160739,160875..161070)	Acanthamoeba castellanii str. Neff	14911863
ACA1_122770	CDS	ACA1_122770	NW_004457265.1	162021	162173	R	encoded by transcript ACA1_122770A; uncharacterized protein	complement(<162021..162173)	Acanthamoeba castellanii str. Neff	14911864
ACA1_122780	CDS	ACA1_122780	NW_004457265.1	163385	166286	D	encoded by transcript ACA1_122780A; uncharacterized protein	join(163385..163837,165061..165189,165930..166286)	Acanthamoeba castellanii str. Neff	14911882
ACA1_122890	CDS	ACA1_122890	NW_004457265.1	167322	168056	D	encoded by transcript ACA1_122890A; C2 domain containing protein	join(167322..167457,167531..167663,167921..>168056)	Acanthamoeba castellanii str. Neff	14911883
ACA1_323100	CDS	ACA1_323100	NW_004457264.1	103	2111	R	encoded by transcript ACA1_323100A; cyclin-dependent kinase	complement(join(<103..211,222..279,391..517,602..716,792..878,956..1062,1449..1493,1602..1718,1809..1895,1980..2111))	Acanthamoeba castellanii str. Neff	14911847
ACA1_323110	CDS	ACA1_323110	NW_004457264.1	3300	5254	D	encoded by transcript ACA1_323110A; uncharacterized protein	join(3300..3633,3713..3980,4065..4257,4361..4448,4544..4651,4737..4819,4916..5019,5119..5254)	Acanthamoeba castellanii str. Neff	14911857
ACA1_323120	CDS	ACA1_323120	NW_004457264.1	5563	8748	R	encoded by transcript ACA1_323120A; Helixloop-helix DNA-binding domain containing protein	complement(join(5563..5687,5765..5939,6042..6455,6630..6753,6864..7067,7170..7603,7714..7890,8006..8261,8510..8748))	Acanthamoeba castellanii str. Neff	14911849
ACA1_323130	CDS	ACA1_323130	NW_004457264.1	10527	11891	R	encoded by transcript ACA1_323130A; HemolysinIII related subfamily protein	complement(join(10527..10677,10748..10823,10920..10999,11081..11228,11312..11364,11455..11564,11638..11693,11759..11891))	Acanthamoeba castellanii str. Neff	14911850
ACA1_323140	CDS	ACA1_323140	NW_004457264.1	12000	16178	R	encoded by transcript ACA1_323140A; RFX DNA-binding domain containing protein	complement(join(12000..13688,13777..13865,13947..14049,14141..14239,14334..14504,14594..14835,15056..16178))	Acanthamoeba castellanii str. Neff	14911852
ACA1_323150	CDS	ACA1_323150	NW_004457264.1	17645	20804	R	encoded by transcript ACA1_323150A; cytochrome b5 domain containing protein	complement(join(17645..17755,17825..18336,18414..18655,18733..18818,18906..19340,19445..19580,19676..19869,19970..20021,20046..20105,20234..20346,20467..20610,20715..20804))	Acanthamoeba castellanii str. Neff	14911858
ACA1_323160	CDS	ACA1_323160	NW_004457264.1	21320	23026	D	encoded by transcript ACA1_323160A; methyltransferase domain containing protein	join(21320..21502,21609..21747,21803..22042,22137..22195,22275..22357,22481..22581,22666..22792,22891..23026)	Acanthamoeba castellanii str. Neff	14911855
ACA1_323170	CDS	ACA1_323170	NW_004457264.1	23152	26900	R	encoded by transcript ACA1_323170A; Utp14 protein	complement(join(23152..23319,23441..23575,23647..24761,24844..25174,25248..25353,25469..25527,25603..25663,25737..25874,25957..26165,26261..26338,26416..26544,26663..26760,26804..26900))	Acanthamoeba castellanii str. Neff	14911853
ACA1_323180	CDS	ACA1_323180	NW_004457264.1	27100	28011	R	encoded by transcript ACA1_323180A; uncharacterized protein	complement(join(27100..27251,27349..27421,27514..28011))	Acanthamoeba castellanii str. Neff	14911848
ACA1_323190	CDS	ACA1_323190	NW_004457264.1	28234	29558	D	encoded by transcript ACA1_323190A; uncharacterized protein	join(28234..28588,28670..28736,28793..28978,29054..29210,29225..29290,29367..29558)	Acanthamoeba castellanii str. Neff	14911851
ACA1_323200	CDS	ACA1_323200	NW_004457264.1	29675	30519	R	encoded by transcript ACA1_323200A; ShTK domain containing protein	complement(join(29675..29736,29810..29872,29929..30027,30123..30270,30340..>30519))	Acanthamoeba castellanii str. Neff	14911856
ACA1_323210	CDS	ACA1_323210	NW_004457264.1	30851	31849	R	encoded by transcript ACA1_323210A; uncharacterized protein	complement(join(30851..31431,31499..31721,31790..31849))	Acanthamoeba castellanii str. Neff	14911854
ACA1_134070	CDS	ACA1_134070	NW_004457263.1	214	984	D	encoded by transcript ACA1_134070A; uncharacterized protein	214..984	Acanthamoeba castellanii str. Neff	14911802
ACA1_134080	CDS	ACA1_134080	NW_004457263.1	1198	1950	D	encoded by transcript ACA1_134080A; uncharacterized protein	1198..1950	Acanthamoeba castellanii str. Neff	14911791
ACA1_134090	CDS	ACA1_134090	NW_004457263.1	2269	4590	D	encoded by transcript ACA1_134090A; uncharacterized protein	2269..4590	Acanthamoeba castellanii str. Neff	14911782
ACA1_134100	CDS	ACA1_134100	NW_004457263.1	5034	5461	D	encoded by transcript ACA1_134100A; uncharacterized protein	join(5034..5282,5300..5461)	Acanthamoeba castellanii str. Neff	14911841
ACA1_134110	CDS	ACA1_134110	NW_004457263.1	6092	6806	D	encoded by transcript ACA1_134110A; DCMP deaminase	join(6092..6655,6795..6806)	Acanthamoeba castellanii str. Neff	14911818
ACA1_134120	CDS	ACA1_134120	NW_004457263.1	8093	8377	R	encoded by transcript ACA1_134120A; uncharacterized protein	complement(8093..8377)	Acanthamoeba castellanii str. Neff	14911809
ACA1_134130	CDS	ACA1_134130	NW_004457263.1	10132	10866	D	encoded by transcript ACA1_134130A; uncharacterized protein	10132..10866	Acanthamoeba castellanii str. Neff	14911836
ACA1_134140	CDS	ACA1_134140	NW_004457263.1	11191	12537	R	encoded by transcript ACA1_134140A; uncharacterized protein	complement(join(11191..11809,12053..12537))	Acanthamoeba castellanii str. Neff	14911797
ACA1_134150	CDS	ACA1_134150	NW_004457263.1	14528	16141	R	encoded by transcript ACA1_134150A; uncharacterized protein	complement(14528..16141)	Acanthamoeba castellanii str. Neff	14911839
ACA1_134270	CDS	ACA1_134270	NW_004457263.1	22632	23787	R	encoded by transcript ACA1_134270A; uncharacterized protein	complement(join(22632..23030,23133..23291,23377..23787))	Acanthamoeba castellanii str. Neff	14911803
ACA1_134280	CDS	ACA1_134280	NW_004457263.1	24071	25243	R	encoded by transcript ACA1_134280A; parkinson disease 7 domain containing protein 1, putative	complement(join(24071..24120,24373..24480,24587..24742,24935..25051,25144..25243))	Acanthamoeba castellanii str. Neff	14911828
ACA1_134290	CDS	ACA1_134290	NW_004457263.1	26069	26519	R	encoded by transcript ACA1_134290A; uncharacterized protein	complement(join(26069..26158,26337..26519))	Acanthamoeba castellanii str. Neff	14911787
ACA1_134400	CDS	ACA1_134400	NW_004457263.1	28958	34517	D	encoded by transcript ACA1_134400A; uncharacterized protein	join(28958..29020,29128..29286,29409..29591,29671..29751,31639..31780,31884..32293,34057..34139,34205..34517)	Acanthamoeba castellanii str. Neff	14911829
ACA1_134610	CDS	ACA1_134610	NW_004457263.1	35360	36048	D	encoded by transcript ACA1_134610A; nitrite reductase, coppercontaining, putative	join(35360..35587,35674..35830,35873..36048)	Acanthamoeba castellanii str. Neff	14911817
ACA1_134620	CDS	ACA1_134620	NW_004457263.1	36439	37626	R	encoded by transcript ACA1_134620A; uncharacterized protein	complement(join(36439..36658,36757..37046,37126..37453,37544..37626))	Acanthamoeba castellanii str. Neff	14911781
ACA1_134730	CDS	ACA1_134730	NW_004457263.1	38823	41597	D	encoded by transcript ACA1_134730A; uncharacterized protein	join(38823..38967,39376..39447,39550..39932,40002..40119,40229..40290,40366..40453,40556..40737,40884..40988,41073..41158,41282..41412,41512..41597)	Acanthamoeba castellanii str. Neff	14911830
ACA1_134740	CDS	ACA1_134740	NW_004457263.1	41745	42703	R	encoded by transcript ACA1_134740A; uncharacterized protein	complement(join(41745..42429,42513..42703))	Acanthamoeba castellanii str. Neff	14911844
ACA1_134750	CDS	ACA1_134750	NW_004457263.1	43546	44834	D	encoded by transcript ACA1_134750A; uncharacterized protein	join(43546..43847,43882..43918,43935..44348,44450..44599,44667..44834)	Acanthamoeba castellanii str. Neff	14911816
ACA1_134760	CDS	ACA1_134760	NW_004457263.1	45056	45741	D	encoded by transcript ACA1_134760A; uncharacterized protein	join(45056..45112,45209..45404,45452..45585,45608..>45741)	Acanthamoeba castellanii str. Neff	14911843
ACA1_134870	CDS	ACA1_134870	NW_004457263.1	46914	52694	R	encoded by transcript ACA1_134870A; PHDfinger domain containing protein	complement(join(46914..46927,46984..47242,47449..47655,47758..47933,48032..48149,48246..48491,48584..48702,48793..48862,48929..49132,49211..49376,49511..49767,49834..49988,50065..50289,50381..52040,52205..52318,52422..52591,52607..52694))	Acanthamoeba castellanii str. Neff	14911825
ACA1_134990	CDS	ACA1_134990	NW_004457263.1	54951	55361	D	encoded by transcript ACA1_134990A; LSM domain containing protein	54951..55361	Acanthamoeba castellanii str. Neff	14911812
ACA1_135000	CDS	ACA1_135000	NW_004457263.1	56846	60014	R	encoded by transcript ACA1_135000A; Bromodomain containing protein	complement(join(56846..57184,57285..57488,57567..57707,57989..58179,58284..59379,59451..60014))	Acanthamoeba castellanii str. Neff	14911827
ACA1_135110	CDS	ACA1_135110	NW_004457263.1	64847	65722	R	encoded by transcript ACA1_135110A; Hypothetical protein	complement(join(64847..64954,65018..65071,65183..65278,65362..65426,65563..65722))	Acanthamoeba castellanii str. Neff	14911788
ACA1_135120	CDS	ACA1_135120	NW_004457263.1	65935	66677	R	encoded by transcript ACA1_135120A; Set2-Rpb1 interacting protein	complement(join(65935..66041,66142..66262,66363..66677))	Acanthamoeba castellanii str. Neff	14911831
ACA1_135130	CDS	ACA1_135130	NW_004457263.1	66680	70930	R	encoded by transcript ACA1_135130A; FAD dependent oxidoreductase domain containing protein	complement(join(66680..67698,67777..68024,68095..68253,68316..68533,68626..68742,68827..68999,69070..69553,69650..69816,69924..70021,70122..70297,70401..70582,70668..70847,70918..70930))	Acanthamoeba castellanii str. Neff	14911814
ACA1_135140	CDS	ACA1_135140	NW_004457263.1	71572	73479	D	encoded by transcript ACA1_135140A; uncharacterized protein	join(71572..72286,72395..72466,72610..72681,72779..72856,72942..73013,73122..73263,73338..73479)	Acanthamoeba castellanii str. Neff	14911807
ACA1_135150	CDS	ACA1_135150	NW_004457263.1	73733	78075	R	encoded by transcript ACA1_135150A; uncharacterized protein	complement(join(73733..74989,75061..75201,75254..75593,75688..75786,75803..75864,76170..77042,77140..77364,77440..77880,77962..78075))	Acanthamoeba castellanii str. Neff	14911842
ACA1_135570	CDS	ACA1_135570	NW_004457263.1	84439	84876	D	encoded by transcript ACA1_135570A; uncharacterized protein	84439..84876	Acanthamoeba castellanii str. Neff	14911790
ACA1_135580	CDS	ACA1_135580	NW_004457263.1	85341	86000	D	encoded by transcript ACA1_135580A; Calciumbinding protein NCSA, putative	join(85341..85554,85741..86000)	Acanthamoeba castellanii str. Neff	14911846
ACA1_135590	CDS	ACA1_135590	NW_004457263.1	86538	86933	D	encoded by transcript ACA1_135590A; uncharacterized protein	join(86538..86681,86739..86933)	Acanthamoeba castellanii str. Neff	14911820
ACA1_135600	CDS	ACA1_135600	NW_004457263.1	87687	88185	D	encoded by transcript ACA1_135600A; uncharacterized protein	join(87687..87786,87892..87983,88084..88185)	Acanthamoeba castellanii str. Neff	14911832
ACA1_135610	CDS	ACA1_135610	NW_004457263.1	88695	91504	D	encoded by transcript ACA1_135610A; zinc finger, c2h2 type domain containing protein	join(88695..88985,89242..89349,89377..90252,90327..90738,90802..90987,91081..91325,91466..91504)	Acanthamoeba castellanii str. Neff	14911799
ACA1_135620	CDS	ACA1_135620	NW_004457263.1	91735	94240	R	encoded by transcript ACA1_135620A; 23S rRNA methyltransferase, putative	complement(join(91735..91817,91986..92231,92318..92404,92529..92638,92752..92867,93014..93271,93431..93535,93739..93836,93949..94081,94214..94240))	Acanthamoeba castellanii str. Neff	14911833
ACA1_135630	CDS	ACA1_135630	NW_004457263.1	94467	95717	D	encoded by transcript ACA1_135630A; uncharacterized protein	join(94467..94568,94679..94762,94965..95717)	Acanthamoeba castellanii str. Neff	14911837
ACA1_135640	CDS	ACA1_135640	NW_004457263.1	95893	99432	R	encoded by transcript ACA1_135640A; C2 domain containing protein	complement(join(95893..95985,96083..96265,96366..96803,96872..97055,97161..97232,97341..97424,97882..98238,98264..98423,98557..98689,98787..98837,98910..99003,99126..99179,99255..99285,99372..99432))	Acanthamoeba castellanii str. Neff	14911834
ACA1_135650	CDS	ACA1_135650	NW_004457263.1	99683	101093	R	encoded by transcript ACA1_135650A; MYND finger domain containing protein	complement(join(99683..99776,99850..99980,100035..100151,100220..100296,100375..100510,100587..100717,100787..100968,101038..101093))	Acanthamoeba castellanii str. Neff	14911783
ACA1_135660	CDS	ACA1_135660	NW_004457263.1	101883	102783	D	encoded by transcript ACA1_135660A; uncharacterized protein	join(101883..102285,102356..102783)	Acanthamoeba castellanii str. Neff	14911795
ACA1_135670	CDS	ACA1_135670	NW_004457263.1	103039	104168	R	encoded by transcript ACA1_135670A; ATP pump family protein protein ENTH domain epsin related family protein	complement(join(103039..103324,103363..103495,103582..103764,103840..103995,104066..104168))	Acanthamoeba castellanii str. Neff	14911792
ACA1_135680	CDS	ACA1_135680	NW_004457263.1	104788	106122	D	encoded by transcript ACA1_135680A; AMP-activated protein kinase, putative	join(104788..104969,105077..105147,105281..105370,105439..105529,105611..105744,105807..105973,106087..106122)	Acanthamoeba castellanii str. Neff	14911798
ACA1_135700	CDS	ACA1_135700	NW_004457263.1	106999	107978	D	encoded by transcript ACA1_135700A; uncharacterized protein	join(106999..107263,107340..107774,107887..107978)	Acanthamoeba castellanii str. Neff	14911808
ACA1_135910	CDS	ACA1_135910	NW_004457263.1	109582	110773	R	encoded by transcript ACA1_135910A; DSBAlike thioredoxin domain containing protein	complement(join(109582..109669,109773..109876,110009..110223,110312..110435,110529..110595,110715..110773))	Acanthamoeba castellanii str. Neff	14911810
ACA1_135920	CDS	ACA1_135920	NW_004457263.1	111371	111682	R	encoded by transcript ACA1_135920A; uncharacterized protein	complement(111371..111682)	Acanthamoeba castellanii str. Neff	14911806
ACA1_135930	CDS	ACA1_135930	NW_004457263.1	115800	118240	D	encoded by transcript ACA1_135930A; Stressactivated protein kinase alpha, putative	join(115800..115856,115964..116036,116179..116219,116316..116389,116542..116689,116767..116843,117029..117077,117199..117287,117395..117466,117587..117762,117881..118045,118149..118240)	Acanthamoeba castellanii str. Neff	14911840
ACA1_135940	CDS	ACA1_135940	NW_004457263.1	118385	119893	D	encoded by transcript ACA1_135940A; Med18 protein	join(118385..118435,118456..118865,118953..119079,119166..119240,119336..119417,119483..119543,119644..119893)	Acanthamoeba castellanii str. Neff	14911826
ACA1_135950	CDS	ACA1_135950	NW_004457263.1	119961	120619	R	encoded by transcript ACA1_135950A; uncharacterized protein	complement(join(119961..120134,120326..120619))	Acanthamoeba castellanii str. Neff	14911838
ACA1_135960	CDS	ACA1_135960	NW_004457263.1	120911	122785	R	encoded by transcript ACA1_135960A; vacuolar atp synthase subunit h, putative	complement(join(120911..120946,121227..121332,121560..121640,121793..121918,122046..122122,122225..122305,122411..122509,122738..122785))	Acanthamoeba castellanii str. Neff	14911813
ACA1_136070	CDS	ACA1_136070	NW_004457263.1	124128	125011	R	encoded by transcript ACA1_136070A; Ribonuclease H1/H2 small subunit	complement(join(124128..124163,124278..124378,124502..124561,124672..125011))	Acanthamoeba castellanii str. Neff	14911811
ACA1_136080	CDS	ACA1_136080	NW_004457263.1	125154	126198	D	encoded by transcript ACA1_136080A; uncharacterized protein	join(125154..125651,125681..125834,125867..126198)	Acanthamoeba castellanii str. Neff	14911804
ACA1_136090	CDS	ACA1_136090	NW_004457263.1	126681	127727	D	encoded by transcript ACA1_136090A; uncharacterized protein	join(126681..126801,126856..126989,127069..127477,127573..127727)	Acanthamoeba castellanii str. Neff	14911821
ACA1_136100	CDS	ACA1_136100	NW_004457263.1	127861	130523	R	encoded by transcript ACA1_136100A; GTP-binding protein ychF family protein, putative	complement(join(127861..128043,128169..128295,128428..128565,128660..128847,128950..129082,129143..129260,129365..129426,129525..129589,129703..129806,129889..129989,130229..130247,130326..130349,130424..130523))	Acanthamoeba castellanii str. Neff	14911801
ACA1_136110	CDS	ACA1_136110	NW_004457263.1	130836	132329	D	encoded by transcript ACA1_136110A; Fbox domain containing protein	join(130836..131048,131145..131215,131368..131655,131777..131885,131995..132109,132196..132329)	Acanthamoeba castellanii str. Neff	14911793
ACA1_136120	CDS	ACA1_136120	NW_004457263.1	132515	133851	D	encoded by transcript ACA1_136120A; tetratricopeptide domain containing protein	join(132515..132643,132735..132837,132949..133021,133104..133176,133244..133329,133409..133490,133576..133851)	Acanthamoeba castellanii str. Neff	14911819
ACA1_136140	CDS	ACA1_136140	NW_004457263.1	136999	138290	D	encoded by transcript ACA1_136140A; homeobox domain containing protein	join(136999..137628,137730..138290)	Acanthamoeba castellanii str. Neff	14911815
ACA1_136150	CDS	ACA1_136150	NW_004457263.1	138924	140293	R	encoded by transcript ACA1_136150A; 26S proteasome nonATPase regulatory subunit 7, putative	complement(join(138924..139064,139165..139563,139688..139866,139931..140023,140119..140293))	Acanthamoeba castellanii str. Neff	14911805
ACA1_136160	CDS	ACA1_136160	NW_004457263.1	140691	143582	D	encoded by transcript ACA1_136160A; primase zinc finger protein	join(140691..141598,141713..141829,141911..141973,142082..142223,142330..142359,142433..142524,142613..142713,142785..142965,143066..143582)	Acanthamoeba castellanii str. Neff	14911796
ACA1_136170	CDS	ACA1_136170	NW_004457263.1	143969	145586	D	encoded by transcript ACA1_136170A; Cofilin/tropomyosin-type actin-binding protein	join(143969..144051,144240..144381,144481..144600,144715..144917,144999..145407,145494..145586)	Acanthamoeba castellanii str. Neff	14911823
ACA1_136180	CDS	ACA1_136180	NW_004457263.1	145846	149167	D	encoded by transcript ACA1_136180A; uncharacterized protein	join(145846..145882,146004..146127,146297..146460,146522..146596,146694..146768,146843..146911,146983..147072,147170..147229,147317..147397,147533..147640,147722..147940,148005..148253,148326..149167)	Acanthamoeba castellanii str. Neff	14911786
ACA1_136190	CDS	ACA1_136190	NW_004457263.1	149304	151081	D	encoded by transcript ACA1_136190A; uncharacterized protein	join(149304..149371,149466..149588,149696..149785,149896..149926,150122..150251,150367..150505,150601..150706,150805..150909,150992..151081)	Acanthamoeba castellanii str. Neff	14911835
ACA1_136200	CDS	ACA1_136200	NW_004457263.1	151283	154743	R	encoded by transcript ACA1_136200A; uncharacterized protein	complement(join(151283..151501,151602..151892,151989..152147,152235..152567,152646..152913,152992..153056,153128..153444,153531..153658,153733..153880,153962..154136,154231..154294,154364..154467,154552..154743))	Acanthamoeba castellanii str. Neff	14911822
ACA1_136310	CDS	ACA1_136310	NW_004457263.1	155176	160153	R	encoded by transcript ACA1_136310A; uncharacterized protein	complement(join(155176..155446,155519..155728,155825..155927,156790..156928,157001..157158,157224..157371,157438..157615,157688..157881,157953..158001,158174..158353,158449..158591,158665..158728,158897..158956,159024..159172,159244..159387,159488..159670,159794..159892,159965..160071,160111..160153))	Acanthamoeba castellanii str. Neff	14911824
ACA1_136520	CDS	ACA1_136520	NW_004457263.1	160677	161896	R	encoded by transcript ACA1_136520A; Hypothetical protein	complement(join(160677..160859,160937..161153,161205..161313,161390..161484,161826..>161896))	Acanthamoeba castellanii str. Neff	14911780
ACA1_136630	CDS	ACA1_136630	NW_004457263.1	163505	165178	D	encoded by transcript ACA1_136630A; Bystin, putative	join(<163505..163736,163812..163869,163938..164044,164350..164570,164674..164791,164880..>165178)	Acanthamoeba castellanii str. Neff	14911784
ACA1_189300	CDS	ACA1_189300	NW_004457262.1	452	1258	D	encoded by transcript ACA1_189300A; uncharacterized protein	join(452..823,911..1258)	Acanthamoeba castellanii str. Neff	14911758
ACA1_189310	CDS	ACA1_189310	NW_004457262.1	1768	5863	D	encoded by transcript ACA1_189310A; uncharacterized protein	join(1768..1969,2184..2302,2398..2508,2613..2729,2816..3116,3208..3776,3884..4015,4105..4632,4722..4863,4935..5237,5339..5432,5521..5863)	Acanthamoeba castellanii str. Neff	14911707
ACA1_189320	CDS	ACA1_189320	NW_004457262.1	6277	8114	R	encoded by transcript ACA1_189320A; transporter, major facilitator subfamily protein	complement(join(6277..6526,6612..6699,6779..6871,6945..7068,7134..7438,7533..7621,7691..7814,7880..8114))	Acanthamoeba castellanii str. Neff	14911724
ACA1_189330	CDS	ACA1_189330	NW_004457262.1	8885	10175	R	encoded by transcript ACA1_189330A; uncharacterized protein	complement(join(8885..9013,9182..9316,9445..9540,9678..9744,9835..9894,10000..10175))	Acanthamoeba castellanii str. Neff	14911732
ACA1_189340	CDS	ACA1_189340	NW_004457262.1	10366	12439	R	encoded by transcript ACA1_189340A; Dyptype peroxidase superfamily protein	complement(join(10366..10545,10631..10701,10789..10924,11002..11089,11184..11293,11404..11515,11606..11678,11875..12024,12159..12280,12417..12439))	Acanthamoeba castellanii str. Neff	14911761
ACA1_189360	CDS	ACA1_189360	NW_004457262.1	15959	17701	R	encoded by transcript ACA1_189360A; Proline dehydrogenase, putative	complement(join(15959..16149,16232..16680,16806..16941,17013..17086,17159..17319,17410..17577,17660..17701))	Acanthamoeba castellanii str. Neff	14911774
ACA1_189370	CDS	ACA1_189370	NW_004457262.1	18237	20457	R	encoded by transcript ACA1_189370A; uncharacterized protein	complement(join(18237..18511,18582..18683,18763..18849,18942..20457))	Acanthamoeba castellanii str. Neff	14911719
ACA1_189380	CDS	ACA1_189380	NW_004457262.1	20618	23309	D	encoded by transcript ACA1_189380A; uncharacterized protein	join(20618..21579,21678..21789,21879..21949,22038..22149,22248..22379,22464..22733,22808..22864,22940..23056,23157..23309)	Acanthamoeba castellanii str. Neff	14911759
ACA1_189390	CDS	ACA1_189390	NW_004457262.1	23367	25967	R	encoded by transcript ACA1_189390A; uncharacterized protein	complement(join(23367..23617,23692..23829,23912..24070,24166..24252,24326..24502,24593..24698,24787..24864,25000..25172,25257..25355,25450..25591,25664..25860,25934..25967))	Acanthamoeba castellanii str. Neff	14911749
ACA1_189400	CDS	ACA1_189400	NW_004457262.1	26471	28176	D	encoded by transcript ACA1_189400A; PB1 domain containing protein	join(26471..26945,26991..27383,27539..28176)	Acanthamoeba castellanii str. Neff	14911738
ACA1_189410	CDS	ACA1_189410	NW_004457262.1	28407	31724	D	encoded by transcript ACA1_189410A; BTB/POZ domain containing protein	join(28407..29600,29689..29757,29836..29910,29983..30086,30200..30314,30400..30504,30587..30672,30741..30838,30931..31041,31123..31168,31261..31340,31424..31547,31637..31724)	Acanthamoeba castellanii str. Neff	14911778
ACA1_189420	CDS	ACA1_189420	NW_004457262.1	32003	34179	D	encoded by transcript ACA1_189420A; protein disulfideisomerase domain containing protein	join(32003..32169,32358..32507,32603..32732,32840..32974,33106..33236,33352..33586,33668..33802,33878..34009,34111..34179)	Acanthamoeba castellanii str. Neff	14911779
ACA1_189440	CDS	ACA1_189440	NW_004457262.1	36003	37721	D	encoded by transcript ACA1_189440A; von Willebrand factor type A domain containing protein	36003..37721	Acanthamoeba castellanii str. Neff	14911762
ACA1_189450	CDS	ACA1_189450	NW_004457262.1	37892	43851	R	encoded by transcript ACA1_189450A; chloride transporter, chloride channel (ClC) subfamily protein	complement(join(37892..38086,38181..38260,38334..38429,38513..38654,38756..38872,38955..39105,39210..39303,39405..39439,39524..39637,39729..40004,40091..40158,40232..40326,40407..40496,40592..40688,40761..40846,40978..41176,41261..41319,41443..41595,41710..41835,41908..41980,42106..42207,42303..42375,42577..42637,42711..42810,42893..43020,43104..43236,43315..43392,43489..43851))	Acanthamoeba castellanii str. Neff	14911751
ACA1_189460	CDS	ACA1_189460	NW_004457262.1	44141	44650	R	encoded by transcript ACA1_189460A; uncharacterized protein	complement(44141..44650)	Acanthamoeba castellanii str. Neff	14911755
ACA1_189570	CDS	ACA1_189570	NW_004457262.1	47766	49062	R	encoded by transcript ACA1_189570A; zinc finger (CCCHtype) family protein	complement(join(47766..47921,48043..48801,48901..49062))	Acanthamoeba castellanii str. Neff	14911756
ACA1_189580	CDS	ACA1_189580	NW_004457262.1	49291	52572	R	encoded by transcript ACA1_189580A; viral life cyclerelated protein	complement(join(49291..49540,49621..49787,49862..49938,50012..50169,50261..50325,50396..50608,50693..50803,50875..51001,51085..51159,51221..51332,51416..51563,51648..51728,51837..51934,52040..52209,52289..52472,52551..52572))	Acanthamoeba castellanii str. Neff	14911718
ACA1_189590	CDS	ACA1_189590	NW_004457262.1	52748	61680	D	encoded by transcript ACA1_189590A; transcriptional regulatorrelated, putative	join(52748..52927,53000..53297,53365..53584,53645..53930,54010..54123,54182..54502,54570..54767,54834..54971,55037..55182,55261..55524,55601..55862,55944..56075,56134..56455,56519..56764,56835..56974,57039..57264,57352..57441,57507..58413,58489..58748,58834..59096,59168..59412,59492..60257,60327..60458,60543..60795,60914..61680)	Acanthamoeba castellanii str. Neff	14911721
ACA1_189600	CDS	ACA1_189600	NW_004457262.1	62334	63617	R	encoded by transcript ACA1_189600A; uncharacterized protein	complement(join(62334..62542,62568..62669,62744..62792,62865..63010,63086..63272,63369..63617))	Acanthamoeba castellanii str. Neff	14911765
ACA1_189610	CDS	ACA1_189610	NW_004457262.1	63798	64993	D	encoded by transcript ACA1_189610A; uncharacterized protein	join(63798..63915,64064..64256,64344..64509,64587..64851,64947..64993)	Acanthamoeba castellanii str. Neff	14911767
ACA1_189620	CDS	ACA1_189620	NW_004457262.1	65572	68302	R	encoded by transcript ACA1_189620A; BTB/POZ domain containing protein	complement(join(65572..65764,65831..66089,66176..66876,67016..67219,67309..67463,67563..67753,67807..67932,67966..68173,68243..68302))	Acanthamoeba castellanii str. Neff	14911771
ACA1_189630	CDS	ACA1_189630	NW_004457262.1	68796	69896	R	encoded by transcript ACA1_189630A; uncharacterized protein	complement(join(68796..68826,68842..68911,68973..69264,69320..69432,69566..69896))	Acanthamoeba castellanii str. Neff	14911772
ACA1_189640	CDS	ACA1_189640	NW_004457262.1	69991	72112	R	encoded by transcript ACA1_189640A; bifunctional aspartate kinase/diaminopimelate decarboxylase protein	complement(join(69991..70064,70123..70191,70263..70409,70500..70580,70622..70712,70804..70855,70932..71164,71280..71362,71559..71603,71673..71849,71908..72112))	Acanthamoeba castellanii str. Neff	14911710
ACA1_189750	CDS	ACA1_189750	NW_004457262.1	72533	73663	D	encoded by transcript ACA1_189750A; uncharacterized protein	72533..73663	Acanthamoeba castellanii str. Neff	14911715
ACA1_189760	CDS	ACA1_189760	NW_004457262.1	73841	80470	R	encoded by transcript ACA1_189760A; RhoGEF domain containing protein	complement(join(73841..74084,74236..74851,74950..75828,75930..76255,76361..76775,76899..77804,77874..77986,78094..78599,78789..79042,79149..79362,79471..79644,79709..79804,79831..80013,80092..80265,80354..80470))	Acanthamoeba castellanii str. Neff	14911713
ACA1_189770	CDS	ACA1_189770	NW_004457262.1	81132	82113	R	encoded by transcript ACA1_189770A; transporter, major intrinsic protein (MIP) superfamily protein	complement(join(81132..81478,81558..82113))	Acanthamoeba castellanii str. Neff	14911766
ACA1_189780	CDS	ACA1_189780	NW_004457262.1	82405	84817	R	encoded by transcript ACA1_189780A; EF hand domain containing protein	complement(join(82405..82580,82675..83313,83419..83580,83594..83690,83823..84023,84118..84288,84354..84481,84585..84675,84770..84817))	Acanthamoeba castellanii str. Neff	14911701
ACA1_189790	CDS	ACA1_189790	NW_004457262.1	86074	88038	D	encoded by transcript ACA1_189790A; NOL1/NOP2/sun domain containing protein	join(86074..86462,86554..86659,86740..86950,87007..87643,87744..87792,87805..88038)	Acanthamoeba castellanii str. Neff	14911723
ACA1_189800	CDS	ACA1_189800	NW_004457262.1	88053	89241	D	encoded by transcript ACA1_189800A; NOL1/NOP2/Sun domain family, member 2, putative	join(88053..88058,88076..88215,88316..88448,88534..88611,88698..88840,89028..89241)	Acanthamoeba castellanii str. Neff	14911726
ACA1_189810	CDS	ACA1_189810	NW_004457262.1	89478	95068	R	encoded by transcript ACA1_189810A; GYF domain containing protein	complement(join(89478..90155,90228..90293,90370..90804,90906..91475,91555..92085,92228..92311,92529..92906,92988..93820,93918..94241,94435..94528,94652..95068))	Acanthamoeba castellanii str. Neff	14911743
ACA1_189820	CDS	ACA1_189820	NW_004457262.1	95425	96955	R	encoded by transcript ACA1_189820A; protein bcp1, putative	complement(join(95425..95580,95688..95840,95934..96015,96044..96180,96263..96325,96379..96654,96752..96955))	Acanthamoeba castellanii str. Neff	14911744
ACA1_189830	CDS	ACA1_189830	NW_004457262.1	97686	98691	D	encoded by transcript ACA1_189830A; partner of sld five, psf2 protein	join(97686..97740,97797..97905,97988..98108,98181..98315,98379..98448,98513..98691)	Acanthamoeba castellanii str. Neff	14911752
ACA1_189840	CDS	ACA1_189840	NW_004457262.1	98828	99289	R	encoded by transcript ACA1_189840A; uncharacterized protein	complement(98828..99289)	Acanthamoeba castellanii str. Neff	14911763
ACA1_189850	CDS	ACA1_189850	NW_004457262.1	99743	100198	R	encoded by transcript ACA1_189850A; uncharacterized protein	complement(99743..100198)	Acanthamoeba castellanii str. Neff	14911764
ACA1_189860	CDS	ACA1_189860	NW_004457262.1	100833	103502	D	encoded by transcript ACA1_189860A; licheninase	join(100833..101046,101121..101197,101275..101359,101459..101716,101792..101869,101944..102042,102119..102236,102324..102472,102549..102674,102714..102923,103000..103203,103330..103502)	Acanthamoeba castellanii str. Neff	14911776
ACA1_189870	CDS	ACA1_189870	NW_004457262.1	104023	105086	D	encoded by transcript ACA1_189870A; DEAD/DEAH box helicase domain containing protein	join(104023..104077,104169..104344,104466..105086)	Acanthamoeba castellanii str. Neff	14911747
ACA1_189880	CDS	ACA1_189880	NW_004457262.1	105322	106545	R	encoded by transcript ACA1_189880A; uncharacterized protein	complement(105322..106545)	Acanthamoeba castellanii str. Neff	14911739
ACA1_189890	CDS	ACA1_189890	NW_004457262.1	106785	107549	R	encoded by transcript ACA1_189890A; universal stress domain containing protein	complement(join(106785..106854,106944..107068,107204..107335,107409..107549))	Acanthamoeba castellanii str. Neff	14911729
ACA1_190000	CDS	ACA1_190000	NW_004457262.1	109251	110707	R	encoded by transcript ACA1_190000A; glycosyltransferase, group 1 domain containing protein	complement(join(109251..109418,109592..109631,109672..109789,109874..109988,110057..110095,110156..110334,110401..110707))	Acanthamoeba castellanii str. Neff	14911746
ACA1_190010	CDS	ACA1_190010	NW_004457262.1	111180	112634	D	encoded by transcript ACA1_190010A; uroporphyrinogenIII synthase	join(111180..111272,111356..111502,111559..111689,111755..111899,111987..112353,112441..112634)	Acanthamoeba castellanii str. Neff	14911769
ACA1_190020	CDS	ACA1_190020	NW_004457262.1	113142	113701	D	encoded by transcript ACA1_190020A; holo[acyl-carrier-protein] synthase	join(113142..113311,113381..113472,113571..113701)	Acanthamoeba castellanii str. Neff	14911770
ACA1_190030	CDS	ACA1_190030	NW_004457262.1	113823	114660	D	encoded by transcript ACA1_190030A; phosphatidate cytidylyltransferase	join(113823..114265,114330..114660)	Acanthamoeba castellanii str. Neff	14911760
ACA1_190040	CDS	ACA1_190040	NW_004457262.1	115193	116739	D	encoded by transcript ACA1_190040A; Longevityassurance protein (LAG1) domain containing protein	join(115193..115378,115482..115718,115768..115892,115978..116133,116230..116368,116452..116625,116704..116739)	Acanthamoeba castellanii str. Neff	14911753
ACA1_190050	CDS	ACA1_190050	NW_004457262.1	117228	118729	D	encoded by transcript ACA1_190050A; carrier superfamily protein	join(117228..117381,117454..117493,117590..117773,117875..118089,118174..118295,118383..118532,118632..118729)	Acanthamoeba castellanii str. Neff	14911720
ACA1_190060	CDS	ACA1_190060	NW_004457262.1	119107	119857	D	encoded by transcript ACA1_190060A; TM2 domain containing protein	join(119107..119230,119301..119404,119497..119740,119811..119857)	Acanthamoeba castellanii str. Neff	14911745
ACA1_190070	CDS	ACA1_190070	NW_004457262.1	120061	121874	R	encoded by transcript ACA1_190070A; Synapsin, ATP binding domain containing protein	complement(join(120061..120210,120292..120526,120592..120700,120802..120853,120953..121028,121135..121219,121332..121353,121440..121531,121673..121874))	Acanthamoeba castellanii str. Neff	14911777
ACA1_190080	CDS	ACA1_190080	NW_004457262.1	122015	123427	R	encoded by transcript ACA1_190080A; hydrolase, carbonnitrogen superfamily protein	complement(join(122015..122140,122213..122363,122449..122576,122660..122760,122882..123066,123168..123427))	Acanthamoeba castellanii str. Neff	14911775
ACA1_190090	CDS	ACA1_190090	NW_004457262.1	123505	123979	D	encoded by transcript ACA1_190090A; uncharacterized protein	join(123505..123592,123664..123702,123772..123876,123954..123979)	Acanthamoeba castellanii str. Neff	14911773
ACA1_190110	CDS	ACA1_190110	NW_004457262.1	128173	131498	R	encoded by transcript ACA1_190110A; ABC transporter A family protein	complement(join(128173..128266,128348..128461,128547..128668,128803..128905,128974..129086,129219..129378,129470..129551,129590..129713,129750..129905,130002..130074,130172..130285,130411..130606,130687..130746,130826..130926,131011..131138,131214..131366,131442..131498))	Acanthamoeba castellanii str. Neff	14911740
ACA1_190120	CDS	ACA1_190120	NW_004457262.1	131632	133710	R	encoded by transcript ACA1_190120A; uncharacterized protein	complement(join(131632..131670,132123..132158,132239..132306,132325..132338,132433..132526,132611..132683,132786..132907,132978..133104,133199..133306,133399..133710))	Acanthamoeba castellanii str. Neff	14911735
ACA1_190230	CDS	ACA1_190230	NW_004457262.1	134409	138407	D	encoded by transcript ACA1_190230A; EGFlike domain containing protein	join(134409..134441,134636..135088,135163..135561,135584..135683,135702..135749,135825..136016,136111..136218,136315..136452,136537..136668,136758..137136,137219..137398,137465..137562,137638..137820,137923..138407)	Acanthamoeba castellanii str. Neff	14911728
ACA1_190240	CDS	ACA1_190240	NW_004457262.1	138555	141393	R	encoded by transcript ACA1_190240A; uncharacterized protein	complement(join(138555..139948,140073..140411,140488..140549,140628..141295,141316..141393))	Acanthamoeba castellanii str. Neff	14911704
ACA1_190250	CDS	ACA1_190250	NW_004457262.1	142013	144007	D	encoded by transcript ACA1_190250A; beta-lactamase	join(142013..142258,142387..142550,142641..142755,142825..142907,142988..143099,143167..143296,143383..143546,143597..143734,143826..143936,143993..144007)	Acanthamoeba castellanii str. Neff	14911742
ACA1_190260	CDS	ACA1_190260	NW_004457262.1	144618	145035	R	encoded by transcript ACA1_190260A; uncharacterized protein	complement(join(144618..144712,144786..145035))	Acanthamoeba castellanii str. Neff	14911734
ACA1_190270	CDS	ACA1_190270	NW_004457262.1	145601	146198	R	encoded by transcript ACA1_190270A; heat shock 70kDa protein 5 (glucoseregulated protein, 78kDa), putative	complement(join(145601..145663,145686..145887,145996..146198))	Acanthamoeba castellanii str. Neff	14911736
ACA1_190280	CDS	ACA1_190280	NW_004457262.1	146814	148218	D	encoded by transcript ACA1_190280A; ubiquitin-specific protease, putative	join(146814..146909,146992..147114,147171..147359,147426..147765,147876..147970,148024..148218)	Acanthamoeba castellanii str. Neff	14911716
ACA1_190390	CDS	ACA1_190390	NW_004457262.1	149641	150687	D	encoded by transcript ACA1_190390A; NADbinding domain 4 domain containing protein	join(149641..149912,149972..150087,150164..150339,150405..150484,150558..150687)	Acanthamoeba castellanii str. Neff	14911768
ACA1_190400	CDS	ACA1_190400	NW_004457262.1	151276	158210	D	encoded by transcript ACA1_190400A; RasGEF domain containing protein	join(151276..152233,152326..153372,153469..153550,153629..153868,153985..155030,155163..155288,155418..155582,155671..155804,155905..156036,156135..156348,156453..156591,156699..156858,156946..157076,157182..157314,157402..157491,157638..158210)	Acanthamoeba castellanii str. Neff	14911709
ACA1_190510	CDS	ACA1_190510	NW_004457262.1	158425	159467	R	encoded by transcript ACA1_190510A; uncharacterized protein	complement(join(158425..158899,159027..159163,159258..159467))	Acanthamoeba castellanii str. Neff	14911714
ACA1_190620	CDS	ACA1_190620	NW_004457262.1	159924	163398	R	encoded by transcript ACA1_190620A; protein kinase domain containing protein	complement(join(<159924..160340,160409..160647,160769..160882,160997..161142,161266..161335,161416..161530,161618..161733,161847..162117,162264..162442,162570..162714,162830..162994,163116..163206,163286..163398))	Acanthamoeba castellanii str. Neff	14911748
ACA1_190630	CDS	ACA1_190630	NW_004457262.1	163636	164749	R	encoded by transcript ACA1_190630A; RNA recognition motif domain containing protein	complement(join(163636..163711,163806..163943,164058..164179,164257..164532,164600..164749))	Acanthamoeba castellanii str. Neff	14911703
ACA1_190640	CDS	ACA1_190640	NW_004457262.1	165033	166729	D	encoded by transcript ACA1_190640A; K+ channel tetramerization subfamily protein	join(165033..165192,165265..165426,165524..165594,166490..166729)	Acanthamoeba castellanii str. Neff	14911705
ACA1_190750	CDS	ACA1_190750	NW_004457262.1	166968	167876	D	encoded by transcript ACA1_190750A; DNAdirected RNA polymerase II subunit RPB7, putative	join(<166968..167102,167192..167383,167486..167572,167829..167876)	Acanthamoeba castellanii str. Neff	14911708
ACA1_190760	CDS	ACA1_190760	NW_004457262.1	168803	169639	R	encoded by transcript ACA1_190760A; glutathione S-transferase family protein, putative	complement(join(168803..168955,169067..169639))	Acanthamoeba castellanii str. Neff	14911711
ACA1_190770	CDS	ACA1_190770	NW_004457262.1	169850	173991	R	encoded by transcript ACA1_190770A; RhoGAP domain containing protein	complement(join(169850..170323,170411..170451,170575..170722,170799..171034,171088..171322,171413..171772,171859..172146,172237..172493,172739..172841,172915..173103,173222..173332,173458..173562,173676..173747,173938..173991))	Acanthamoeba castellanii str. Neff	14911712
ACA1_190780	CDS	ACA1_190780	NW_004457262.1	174079	174582	R	encoded by transcript ACA1_190780A; uncharacterized protein	complement(join(174079..174188,174300..174372,174529..174582))	Acanthamoeba castellanii str. Neff	14911717
ACA1_190790	CDS	ACA1_190790	NW_004457262.1	175228	175537	D	encoded by transcript ACA1_190790A; uncharacterized protein	175228..>175537	Acanthamoeba castellanii str. Neff	14911706
ACA1_190910	CDS	ACA1_190910	NW_004457262.1	180409	182719	R	encoded by transcript ACA1_190910A; uncharacterized protein	complement(join(180409..180508,180589..180697,180795..181095,181212..181426,181503..181713,181812..181933,182054..182414,182490..182613,182682..182719))	Acanthamoeba castellanii str. Neff	14911725
ACA1_190920	CDS	ACA1_190920	NW_004457262.1	182967	183412	R	encoded by transcript ACA1_190920A; uncharacterized protein	complement(join(182967..183197,183254..183412))	Acanthamoeba castellanii str. Neff	14911727
ACA1_191030	CDS	ACA1_191030	NW_004457262.1	183562	185414	D	encoded by transcript ACA1_191030A; CUE domain containing protein	join(183562..183651,183764..183919,184033..184278,184371..184549,184688..184991,185061..185171,185199..185414)	Acanthamoeba castellanii str. Neff	14911730
ACA1_191140	CDS	ACA1_191140	NW_004457262.1	185963	186289	R	encoded by transcript ACA1_191140A; uncharacterized protein	complement(join(185963..186196,186254..186289))	Acanthamoeba castellanii str. Neff	14911731
ACA1_191150	CDS	ACA1_191150	NW_004457262.1	186453	187804	D	encoded by transcript ACA1_191150A; triosephosphate isomerase	join(186453..186494,186560..186629,186686..186723,186736..186806,186875..186959,187032..187164,187232..187273,187650..187804)	Acanthamoeba castellanii str. Neff	14911733
ACA1_191160	CDS	ACA1_191160	NW_004457262.1	188118	188741	R	encoded by transcript ACA1_191160A; small nuclear RNA activating complex, polypeptide 3, 50kDa, putative	complement(join(188118..188259,188315..188422,188506..188741))	Acanthamoeba castellanii str. Neff	14911737
ACA1_191170	CDS	ACA1_191170	NW_004457262.1	188920	189336	D	encoded by transcript ACA1_191170A; ribosomal protein L21e, putative	join(188920..189133,189221..189336)	Acanthamoeba castellanii str. Neff	14911741
ACA1_191180	CDS	ACA1_191180	NW_004457262.1	190437	198266	D	encoded by transcript ACA1_191180A; integrator complex subunit 9, putative	join(190437..190517,190619..190783,190896..191030,194496..194584,194649..194740,194828..194887,195007..195172,195276..195369,197798..197853,197945..198018,198097..198266)	Acanthamoeba castellanii str. Neff	14911702
ACA1_126940	CDS	ACA1_126940	NW_004457261.1	4805	5628	D	encoded by transcript ACA1_126940A; uncharacterized protein	join(4805..5030,5099..5229,5309..5355,5502..5628)	Acanthamoeba castellanii str. Neff	14911678
ACA1_126950	CDS	ACA1_126950	NW_004457261.1	5808	6684	R	encoded by transcript ACA1_126950A; cellulose binding domain containing protein	complement(join(5808..6202,6325..6561,6627..6684))	Acanthamoeba castellanii str. Neff	14911691
ACA1_126960	CDS	ACA1_126960	NW_004457261.1	7442	8533	D	encoded by transcript ACA1_126960A; uncharacterized protein	7442..8533	Acanthamoeba castellanii str. Neff	14911686
ACA1_126970	CDS	ACA1_126970	NW_004457261.1	8816	9655	R	encoded by transcript ACA1_126970A; uncharacterized protein	complement(8816..9655)	Acanthamoeba castellanii str. Neff	14911687
ACA1_126980	CDS	ACA1_126980	NW_004457261.1	9864	12052	R	encoded by transcript ACA1_126980A; aconitate hydratase, cytoplasmic, putative	complement(join(9864..9917,10211..10509,10732..11303,11584..11777,11990..>12052))	Acanthamoeba castellanii str. Neff	14911696
ACA1_127090	CDS	ACA1_127090	NW_004457261.1	12395	13241	D	encoded by transcript ACA1_127090A; uncharacterized protein	join(12395..12543,12637..12657,12844..12905,12918..13041,13130..>13241)	Acanthamoeba castellanii str. Neff	14911682
ACA1_127200	CDS	ACA1_127200	NW_004457261.1	13526	14439	R	encoded by transcript ACA1_127200A; aconitate hydratase	complement(join(13526..13691,13888..14188,14391..14439))	Acanthamoeba castellanii str. Neff	14911699
ACA1_127310	CDS	ACA1_127310	NW_004457261.1	14842	16033	D	encoded by transcript ACA1_127310A; uncharacterized protein	join(14842..14952,15093..15190,15280..15358,15470..15726,15805..15870,16015..16033)	Acanthamoeba castellanii str. Neff	14911679
ACA1_127420	CDS	ACA1_127420	NW_004457261.1	15996	19224	R	encoded by transcript ACA1_127420A; aconitate hydratase	complement(join(15996..16041,16094..16343,16545..16867,17197..17437,17605..17707,18024..18302,18500..18558,18636..18737,19122..19224))	Acanthamoeba castellanii str. Neff	14911680
ACA1_127430	CDS	ACA1_127430	NW_004457261.1	19669	19908	R	encoded by transcript ACA1_127430A; uncharacterized protein	complement(19669..19908)	Acanthamoeba castellanii str. Neff	14911681
ACA1_127440	CDS	ACA1_127440	NW_004457261.1	20114	22400	D	encoded by transcript ACA1_127440A; [Acyl-carrier protein] S-malonyltransferase	join(20114..20262,20325..20427,20492..20566,20665..20739,20851..20970,21073..21176,21242..21275,21407..21493,21576..21678,21740..21911,21981..22137,22227..22400)	Acanthamoeba castellanii str. Neff	14911683
ACA1_127450	CDS	ACA1_127450	NW_004457261.1	22444	23439	R	encoded by transcript ACA1_127450A; uncharacterized protein	complement(22444..23439)	Acanthamoeba castellanii str. Neff	14911684
ACA1_127460	CDS	ACA1_127460	NW_004457261.1	23787	24147	R	encoded by transcript ACA1_127460A; uncharacterized protein	complement(join(23787..23817,23981..24147))	Acanthamoeba castellanii str. Neff	14911685
ACA1_127470	CDS	ACA1_127470	NW_004457261.1	24432	25214	R	encoded by transcript ACA1_127470A; uncharacterized protein	complement(join(24432..24679,24779..24830,24936..25214))	Acanthamoeba castellanii str. Neff	14911688
ACA1_127580	CDS	ACA1_127580	NW_004457261.1	25892	26561	D	encoded by transcript ACA1_127580A; uncharacterized protein	join(25892..26131,26151..26561)	Acanthamoeba castellanii str. Neff	14911689
ACA1_127590	CDS	ACA1_127590	NW_004457261.1	26703	27713	R	encoded by transcript ACA1_127590A; uncharacterized protein	complement(26703..27713)	Acanthamoeba castellanii str. Neff	14911690
ACA1_127600	CDS	ACA1_127600	NW_004457261.1	28048	29123	R	encoded by transcript ACA1_127600A; uncharacterized protein	complement(join(28048..28078,28357..28570,28679..28730,28848..29123))	Acanthamoeba castellanii str. Neff	14911692
ACA1_127610	CDS	ACA1_127610	NW_004457261.1	29424	34447	R	encoded by transcript ACA1_127610A; core histone h2a/h2b/h3/h4 superfamily protein	complement(join(29424..31712,31841..31924,32015..34447))	Acanthamoeba castellanii str. Neff	14911693
ACA1_127620	CDS	ACA1_127620	NW_004457261.1	35879	37090	D	encoded by transcript ACA1_127620A; DNA repair protein alkB, putative	join(35879..35972,36041..36254,36327..36475,36565..36745,36967..37090)	Acanthamoeba castellanii str. Neff	14911694
ACA1_127630	CDS	ACA1_127630	NW_004457261.1	37441	38448	D	encoded by transcript ACA1_127630A; WH2 motif domain containing protein	37441..38448	Acanthamoeba castellanii str. Neff	14911695
ACA1_127640	CDS	ACA1_127640	NW_004457261.1	38846	40613	D	encoded by transcript ACA1_127640A; glycerophosphodiester phosphodiesterase family protein	join(38846..39029,39137..39639,39758..39842,39986..40081,40160..40270,40345..40613)	Acanthamoeba castellanii str. Neff	14911697
ACA1_127650	CDS	ACA1_127650	NW_004457261.1	40828	41333	D	encoded by transcript ACA1_127650A; uncharacterized protein	join(40828..41130,41328..41333)	Acanthamoeba castellanii str. Neff	14911698
ACA1_127660	CDS	ACA1_127660	NW_004457261.1	41805	42260	D	encoded by transcript ACA1_127660A; uncharacterized protein	41805..>42260	Acanthamoeba castellanii str. Neff	14911700
ACA1_387070	CDS	ACA1_387070	NW_004457260.1	194	2008	R	encoded by transcript ACA1_387070A; Ltb4dh protein	complement(join(194..318,365..488,597..712,796..928,999..1058,1160..1306,1403..1513,1606..1689,1764..1883,1961..2008))	Acanthamoeba castellanii str. Neff	14911643
ACA1_387080	CDS	ACA1_387080	NW_004457260.1	2162	5077	D	encoded by transcript ACA1_387080A; uncharacterized protein	join(2162..2171,2224..2305,2406..2754,2904..3029,3105..3222,3325..3415,3733..3851,3941..4057,4142..4216,4331..4421,4530..4884,4985..5077)	Acanthamoeba castellanii str. Neff	14911602
ACA1_387090	CDS	ACA1_387090	NW_004457260.1	5402	7849	R	encoded by transcript ACA1_387090A; selenoprotein O (SELO) family protein	complement(join(5402..5423,5504..5594,5793..5861,5946..6064,6167..6440,6547..6742,6840..7012,7129..7271,7359..7504,7582..7677,7751..7849))	Acanthamoeba castellanii str. Neff	14911651
ACA1_387100	CDS	ACA1_387100	NW_004457260.1	8434	9897	R	encoded by transcript ACA1_387100A; RapGAP/RanGAP domain containing protein	complement(join(8434..8579,8665..8832,8937..9036,9113..9216,9304..9402,9538..9704,9839..9897))	Acanthamoeba castellanii str. Neff	14911662
ACA1_387110	CDS	ACA1_387110	NW_004457260.1	10424	11107	D	encoded by transcript ACA1_387110A; uncharacterized protein	join(10424..10530,10643..10901,10934..10997,11058..11107)	Acanthamoeba castellanii str. Neff	14911663
ACA1_387220	CDS	ACA1_387220	NW_004457260.1	11544	12415	R	encoded by transcript ACA1_387220A; uncharacterized protein	complement(join(11544..11571,11703..11979,12088..12415))	Acanthamoeba castellanii str. Neff	14911551
ACA1_387230	CDS	ACA1_387230	NW_004457260.1	12847	13916	D	encoded by transcript ACA1_387230A; uncharacterized protein	join(12847..12906,12983..13321,13389..13521,13559..13693,13771..13916)	Acanthamoeba castellanii str. Neff	14911615
ACA1_387240	CDS	ACA1_387240	NW_004457260.1	14170	14966	D	encoded by transcript ACA1_387240A; uncharacterized protein	join(14170..14236,14298..14479,14541..14966)	Acanthamoeba castellanii str. Neff	14911568
ACA1_387250	CDS	ACA1_387250	NW_004457260.1	15093	20276	R	encoded by transcript ACA1_387250A; uncharacterized protein	complement(join(15093..15200,15285..15413,15513..15575,15639..15739,15889..15979,16066..16221,16340..16471,16554..16661,16764..16884,16977..17168,17252..17517,17589..17653,17744..17861,17929..18027,18133..18225,18314..18421,18531..18596,18674..18754,18846..18970,19041..19237,19309..19365,19436..19485,19568..19734,19803..19868,19946..20067,20131..20276))	Acanthamoeba castellanii str. Neff	14911609
ACA1_387260	CDS	ACA1_387260	NW_004457260.1	20367	25003	D	encoded by transcript ACA1_387260A; BTB/POZ domain containing protein	join(20367..20721,20954..20980,21070..21550,21593..21754,21835..21920,21991..22810,22903..22994,23045..23292,23483..23550,23620..24038,24159..24252,24266..24278,24383..25003)	Acanthamoeba castellanii str. Neff	14911581
ACA1_387270	CDS	ACA1_387270	NW_004457260.1	25140	26687	R	encoded by transcript ACA1_387270A; uncharacterized protein	complement(join(25140..25314,25417..25876,25951..26071,26302..26572,26647..26687))	Acanthamoeba castellanii str. Neff	14911582
ACA1_387280	CDS	ACA1_387280	NW_004457260.1	27156	30111	D	encoded by transcript ACA1_387280A; helicase associated domain containing protein	join(27156..28364,28569..29084,29398..30111)	Acanthamoeba castellanii str. Neff	14911656
ACA1_387290	CDS	ACA1_387290	NW_004457260.1	30386	40840	D	encoded by transcript ACA1_387290A; ubiquitin interaction motif domain containing protein	join(30386..30448,30512..30595,30851..32635,32723..33343,33367..38117,38213..40631,40649..40840)	Acanthamoeba castellanii str. Neff	14911661
ACA1_387300	CDS	ACA1_387300	NW_004457260.1	40981	45897	D	encoded by transcript ACA1_387300A; uncharacterized protein	40981..45897	Acanthamoeba castellanii str. Neff	14911605
ACA1_387310	CDS	ACA1_387310	NW_004457260.1	46631	48179	R	encoded by transcript ACA1_387310A; MORN repeatcontaining protein	complement(join(46631..46834,46921..47018,47082..47198,47277..47419,47501..47570,47663..47762,47849..47913,48005..48179))	Acanthamoeba castellanii str. Neff	14911586
ACA1_387320	CDS	ACA1_387320	NW_004457260.1	48727	49465	R	encoded by transcript ACA1_387320A; Fbox domain containing protein	complement(join(48727..48819,48886..49008,49100..49119,49300..49465))	Acanthamoeba castellanii str. Neff	14911645
ACA1_387330	CDS	ACA1_387330	NW_004457260.1	49822	50163	D	encoded by transcript ACA1_387330A; uncharacterized protein	49822..50163	Acanthamoeba castellanii str. Neff	14911648
ACA1_387340	CDS	ACA1_387340	NW_004457260.1	50529	51318	R	encoded by transcript ACA1_387340A; uncharacterized protein	complement(join(50529..50621,50687..50809,50951..51121,51268..51318))	Acanthamoeba castellanii str. Neff	14911677
ACA1_387350	CDS	ACA1_387350	NW_004457260.1	51412	52510	R	encoded by transcript ACA1_387350A; uncharacterized protein	complement(join(51412..51425,51471..52390,52458..>52510))	Acanthamoeba castellanii str. Neff	14911560
ACA1_387360	CDS	ACA1_387360	NW_004457260.1	52886	53243	R	encoded by transcript ACA1_387360A; uncharacterized protein	complement(join(52886..52962,53051..53243))	Acanthamoeba castellanii str. Neff	14911592
ACA1_387470	CDS	ACA1_387470	NW_004457260.1	53834	54483	D	encoded by transcript ACA1_387470A; response regulator receiver domain containing protein	join(53834..54068,54143..54324,54406..54483)	Acanthamoeba castellanii str. Neff	14911556
ACA1_387480	CDS	ACA1_387480	NW_004457260.1	54562	56876	R	encoded by transcript ACA1_387480A; uncharacterized protein	complement(join(54562..54572,54679..55065,55147..55516,55587..55675,55797..55878,55959..56031,56319..56370,56446..56550,56674..56748,56834..56876))	Acanthamoeba castellanii str. Neff	14911593
ACA1_387490	CDS	ACA1_387490	NW_004457260.1	57226	58707	R	encoded by transcript ACA1_387490A; uncharacterized protein	complement(join(57226..57233,57314..57535,57614..57713,57967..58040,58129..58210,58238..58350,58425..58524,58612..58707))	Acanthamoeba castellanii str. Neff	14911544
ACA1_387600	CDS	ACA1_387600	NW_004457260.1	58809	62829	R	encoded by transcript ACA1_387600A; ubiquitin domain containing protein	complement(join(58809..59293,59477..59622,59761..59837,59922..60051,60096..60461,60599..60773,60850..61003,61363..61460,61560..61652,61765..61849,62086..62120,62189..62440,62574..62829))	Acanthamoeba castellanii str. Neff	14911571
ACA1_387720	CDS	ACA1_387720	NW_004457260.1	66417	67279	D	encoded by transcript ACA1_387720A; universal stress domain containing protein	join(66417..66557,66616..66945,67034..67279)	Acanthamoeba castellanii str. Neff	14911545
ACA1_387730	CDS	ACA1_387730	NW_004457260.1	67451	69525	R	encoded by transcript ACA1_387730A; EF hand domain containing protein	complement(join(67451..67577,67680..67805,67924..67988,68091..68316,68485..68569,68679..68804,68887..69045,69149..69301,69438..69525))	Acanthamoeba castellanii str. Neff	14911553
ACA1_387740	CDS	ACA1_387740	NW_004457260.1	69890	72330	R	encoded by transcript ACA1_387740A; oxidoreductase, short chain dehydrogenase/reductase superfamily protein	complement(join(69890..70077,70148..70234,70353..70520,70577..70669,70749..70817,70973..71116,71173..71265,71349..71417,71488..71578,71673..71755,71843..71865,71934..72033,72150..72205,72320..72330))	Acanthamoeba castellanii str. Neff	14911606
ACA1_387850	CDS	ACA1_387850	NW_004457260.1	72333	75169	R	encoded by transcript ACA1_387850A; acylCoA oxidase domain containing protein	complement(join(72333..73295,73384..73595,73658..73813,73950..74136,74216..74379,74474..74683,74860..75169))	Acanthamoeba castellanii str. Neff	14911652
ACA1_387860	CDS	ACA1_387860	NW_004457260.1	75399	77399	R	encoded by transcript ACA1_387860A; high molecular weight heat shock protein	complement(75399..77399)	Acanthamoeba castellanii str. Neff	14911603
ACA1_387870	CDS	ACA1_387870	NW_004457260.1	77755	78887	R	encoded by transcript ACA1_387870A; uncharacterized protein	complement(join(77755..78105,78327..78506,78571..78747,78789..78887))	Acanthamoeba castellanii str. Neff	14911650
ACA1_387880	CDS	ACA1_387880	NW_004457260.1	79139	81265	D	encoded by transcript ACA1_387880A; uncharacterized protein	join(79139..80523,80608..80650,80731..80776,80839..80953,81049..81265)	Acanthamoeba castellanii str. Neff	14911595
ACA1_387890	CDS	ACA1_387890	NW_004457260.1	81471	84208	D	encoded by transcript ACA1_387890A; PH domain containing protein	join(81471..81737,81842..81976,82061..82171,82248..82367,82451..82528,82615..82737,82798..82902,82980..83111,83183..83255,83348..83422,83565..83629,83751..83866,83957..84081,84186..84208)	Acanthamoeba castellanii str. Neff	14911584
ACA1_387900	CDS	ACA1_387900	NW_004457260.1	84276	84821	R	encoded by transcript ACA1_387900A; ADPribosylation factor 1, putative	complement(84276..84821)	Acanthamoeba castellanii str. Neff	14911601
ACA1_387910	CDS	ACA1_387910	NW_004457260.1	85582	88981	R	encoded by transcript ACA1_387910A; peptidase, S8/S53 subfamily protein	complement(join(85582..85622,85724..85897,86164..86215,86297..86416,86561..86656,86791..86881,86991..87064,87144..87218,87344..87498,87573..87626,87713..87745,88005..88145,88248..88346,88510..88600,88683..88763,88874..88981))	Acanthamoeba castellanii str. Neff	14911669
ACA1_387920	CDS	ACA1_387920	NW_004457260.1	89450	92526	R	encoded by transcript ACA1_387920A; phospholipase blike protein g, putative	complement(join(89450..89550,89623..89721,89813..89921,89936..89942,90147..90296,90389..90495,90576..90686,90784..90851,90926..91061,91143..91199,91284..91375,91571..91640,91730..91805,91906..92038,92148..92237,92306..92344,92391..92526))	Acanthamoeba castellanii str. Neff	14911626
ACA1_387930	CDS	ACA1_387930	NW_004457260.1	93131	93763	D	encoded by transcript ACA1_387930A; uncharacterized protein	join(93131..93244,93377..93545,93645..93763)	Acanthamoeba castellanii str. Neff	14911576
ACA1_387940	CDS	ACA1_387940	NW_004457260.1	94081	94310	D	encoded by transcript ACA1_387940A; uncharacterized protein	94081..>94310	Acanthamoeba castellanii str. Neff	14911562
ACA1_388050	CDS	ACA1_388050	NW_004457260.1	94554	95259	R	encoded by transcript ACA1_388050A; developmental protein	complement(join(<94554..94625,94708..94764,94847..94938,95032..95101,95191..95259))	Acanthamoeba castellanii str. Neff	14911546
ACA1_388160	CDS	ACA1_388160	NW_004457260.1	96738	97765	D	encoded by transcript ACA1_388160A; uncharacterized protein	join(96738..96886,97044..97168,97291..97374,97480..97631,97721..97765)	Acanthamoeba castellanii str. Neff	14911573
ACA1_388170	CDS	ACA1_388170	NW_004457260.1	97942	98667	D	encoded by transcript ACA1_388170A; uncharacterized protein	join(97942..98031,98086..98127,98190..98276,98340..98441,98467..98667)	Acanthamoeba castellanii str. Neff	14911591
ACA1_388180	CDS	ACA1_388180	NW_004457260.1	98761	99728	D	encoded by transcript ACA1_388180A; actin-1, putative	join(98761..98997,99012..99728)	Acanthamoeba castellanii str. Neff	14911613
ACA1_388190	CDS	ACA1_388190	NW_004457260.1	101251	104150	D	encoded by transcript ACA1_388190A; F-box domain containing protein	join(101251..101421,101513..102041,102215..102265,102406..102635,102788..102871,103628..103852,103938..104150)	Acanthamoeba castellanii str. Neff	14911597
ACA1_388300	CDS	ACA1_388300	NW_004457260.1	104163	106345	R	encoded by transcript ACA1_388300A; zinc finger, HIT domain containing 2, putative	complement(join(104163..104528,104614..104676,104786..104885,104967..105162,105237..105362,105458..105515,105631..105765,105867..105939,106071..106345))	Acanthamoeba castellanii str. Neff	14911627
ACA1_388310	CDS	ACA1_388310	NW_004457260.1	106613	107680	R	encoded by transcript ACA1_388310A; micropain, putative	complement(join(106613..106799,106914..107072,107188..107440,107590..107680))	Acanthamoeba castellanii str. Neff	14911631
ACA1_388420	CDS	ACA1_388420	NW_004457260.1	108542	108865	D	encoded by transcript ACA1_388420A; eukaryotic initiation factor, putative	<108542..108865	Acanthamoeba castellanii str. Neff	14911619
ACA1_388430	CDS	ACA1_388430	NW_004457260.1	108955	109581	R	encoded by transcript ACA1_388430A; chromo' (CHRromatin Organization MOdifier) domain containing protein	complement(108955..109581)	Acanthamoeba castellanii str. Neff	14911611
ACA1_388440	CDS	ACA1_388440	NW_004457260.1	110588	112199	D	encoded by transcript ACA1_388440A; uncharacterized protein	join(110588..110630,110703..110838,110966..111037,111114..111154,111327..111412,111522..111608,111671..111818,111931..112014,112105..112199)	Acanthamoeba castellanii str. Neff	14911608
ACA1_388450	CDS	ACA1_388450	NW_004457260.1	112568	119536	D	encoded by transcript ACA1_388450A; serine/threonine protein kinase	join(112568..112625,112691..112802,112919..112979,113061..113180,113324..113638,113749..113933,114213..114562,114645..114883,114968..115099,115180..115366,115429..115576,115694..115938,116011..116393,116476..116572,116642..116703,116809..117008,117091..117798,117897..118204,118267..118719,118816..119021,119120..119536)	Acanthamoeba castellanii str. Neff	14911644
ACA1_388460	CDS	ACA1_388460	NW_004457260.1	119660	121716	R	encoded by transcript ACA1_388460A; tRNAdihydrouridine synthase 1-like protein, putative	complement(join(119660..119755,119850..119961,120065..120226,120357..120446,120534..120610,120731..120799,120882..120925,121007..121093,121206..121278,121381..121485,121630..121716))	Acanthamoeba castellanii str. Neff	14911658
ACA1_388470	CDS	ACA1_388470	NW_004457260.1	121785	122270	R	encoded by transcript ACA1_388470A; uncharacterized protein	complement(join(121785..121951,122012..122270))	Acanthamoeba castellanii str. Neff	14911567
ACA1_388480	CDS	ACA1_388480	NW_004457260.1	122490	123771	R	encoded by transcript ACA1_388480A; Cofilin/tropomyosin-type actin-binding protein	complement(join(122490..122589,122653..122760,122881..123002,123088..123154,123232..123458,123529..123597,123718..123771))	Acanthamoeba castellanii str. Neff	14911633
ACA1_388490	CDS	ACA1_388490	NW_004457260.1	124234	127091	D	encoded by transcript ACA1_388490A; ankyrin 2,3/unc44, putative	join(124234..124320,124453..124598,124702..125033,125172..125276,125381..125549,125623..125693,125769..125909,126001..126124,126291..126364,126457..126565,126627..126718,126807..126913,127002..127091)	Acanthamoeba castellanii str. Neff	14911653
ACA1_388500	CDS	ACA1_388500	NW_004457260.1	127230	129399	R	encoded by transcript ACA1_388500A; transmembrane amino acid transporter protein	complement(join(127230..127478,127495..127779,127863..128019,128097..128212,128333..128416,128694..128786,128889..128970,129044..129399))	Acanthamoeba castellanii str. Neff	14911672
ACA1_388510	CDS	ACA1_388510	NW_004457260.1	129823	134150	D	encoded by transcript ACA1_388510A; SH3 domain containing protein	join(129823..129861,129935..130291,130358..130964,131063..131707,131773..134150)	Acanthamoeba castellanii str. Neff	14911575
ACA1_388520	CDS	ACA1_388520	NW_004457260.1	134258	135119	D	encoded by transcript ACA1_388520A; EF hand domain containing protein	join(134258..134414,134543..134647,134742..134882,134962..135119)	Acanthamoeba castellanii str. Neff	14911561
ACA1_388530	CDS	ACA1_388530	NW_004457260.1	135306	136203	R	encoded by transcript ACA1_388530A; molluscan rhodopsin family protein	complement(join(135306..135524,135651..135702,135775..135856,136032..136203))	Acanthamoeba castellanii str. Neff	14911649
ACA1_388540	CDS	ACA1_388540	NW_004457260.1	136489	138550	D	encoded by transcript ACA1_388540A; regulator of chromosome condensation (RCC1) repeat domain containing protein	join(136489..136601,136700..136801,136877..136980,137087..137202,137555..137670,137743..137858,137951..138135,138247..138350,138424..138550)	Acanthamoeba castellanii str. Neff	14911579
ACA1_388550	CDS	ACA1_388550	NW_004457260.1	138744	139372	D	encoded by transcript ACA1_388550A; uncharacterized protein	join(138744..139278,139362..139372)	Acanthamoeba castellanii str. Neff	14911673
ACA1_388660	CDS	ACA1_388660	NW_004457260.1	140790	143523	D	encoded by transcript ACA1_388660A; uncharacterized protein	join(140790..140947,141070..141196,141367..141630,141811..141868,141938..142081,142223..142437,142575..142731,142859..143523)	Acanthamoeba castellanii str. Neff	14911585
ACA1_388670	CDS	ACA1_388670	NW_004457260.1	143806	144240	D	encoded by transcript ACA1_388670A; uncharacterized protein	143806..144240	Acanthamoeba castellanii str. Neff	14911549
ACA1_388680	CDS	ACA1_388680	NW_004457260.1	144378	147842	R	encoded by transcript ACA1_388680A; Frizzled/Smoothened family membrane region protein	complement(join(144378..144444,144543..144628,144781..144955,145050..145110,145185..145323,145401..145462,145565..145646,145724..145807,145989..146059,146130..146205,146268..146351,146438..146706,146803..146953,147053..147129,147211..147322,147447..147489,147655..147842))	Acanthamoeba castellanii str. Neff	14911634
ACA1_388690	CDS	ACA1_388690	NW_004457260.1	148433	149048	D	encoded by transcript ACA1_388690A; uncharacterized protein	join(148433..148660,148721..148853,148951..149048)	Acanthamoeba castellanii str. Neff	14911614
ACA1_388700	CDS	ACA1_388700	NW_004457260.1	149223	152196	R	encoded by transcript ACA1_388700A; uncharacterized protein	complement(join(149223..149351,149436..149551,149659..149739,149813..149974,150059..150143,150231..150326,150454..150528,150658..150732,150795..150914,151085..151184,151295..151371,151450..151520,151585..151769,151865..151985,152112..152196))	Acanthamoeba castellanii str. Neff	14911607
ACA1_388710	CDS	ACA1_388710	NW_004457260.1	152508	153200	R	encoded by transcript ACA1_388710A; guanine nucleotidebinding protein alpha-1 subunit	complement(join(152508..152584,152667..152776,152867..152939,153011..153200))	Acanthamoeba castellanii str. Neff	14911612
ACA1_388720	CDS	ACA1_388720	NW_004457260.1	153511	154103	R	encoded by transcript ACA1_388720A; guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3, putative	complement(join(153511..153693,153756..153913,153977..154103))	Acanthamoeba castellanii str. Neff	14911654
ACA1_388730	CDS	ACA1_388730	NW_004457260.1	154721	156646	R	encoded by transcript ACA1_388730A; uncharacterized protein	complement(join(154721..154968,154992..155475,155547..156344,156403..156506,156577..156646))	Acanthamoeba castellanii str. Neff	14911646
ACA1_388750	CDS	ACA1_388750	NW_004457260.1	158268	159380	D	encoded by transcript ACA1_388750A; oxidoreductase, short chain dehydrogenase/reductase superfamily protein	join(158268..158298,158437..159380)	Acanthamoeba castellanii str. Neff	14911638
ACA1_388760	CDS	ACA1_388760	NW_004457260.1	159570	160739	D	encoded by transcript ACA1_388760A; uncharacterized protein	join(159570..159727,159781..159870,159945..160031,160105..160383,160458..160578,160662..160739)	Acanthamoeba castellanii str. Neff	14911655
ACA1_388770	CDS	ACA1_388770	NW_004457260.1	160949	166316	D	encoded by transcript ACA1_388770A; Poly(A) polymerase central domain containing protein	join(160949..161104,161242..161562,161629..161739,161835..161958,162026..162182,162288..162475,162550..162667,162770..163184,163276..163415,163489..163758,163835..164111,164197..164346,164441..164551,164660..164861,164949..165190,165278..165376,165468..165613,165677..165843,165910..166153,166262..166316)	Acanthamoeba castellanii str. Neff	14911552
ACA1_388780	CDS	ACA1_388780	NW_004457260.1	166941	171883	D	encoded by transcript ACA1_388780A; EGFlike domain containing protein	join(166941..167171,167367..167553,167754..167869,168022..168080,168181..168335,168439..168531,168626..168685,168805..168902,169002..169079,169103..169253,169333..169440,169529..169656,169731..169874,169989..170118,170228..170337,170428..170483,170574..170746,170877..171112,171266..171364,171458..171603,171679..171824,171873..171883)	Acanthamoeba castellanii str. Neff	14911565
ACA1_388890	CDS	ACA1_388890	NW_004457260.1	172713	174015	D	encoded by transcript ACA1_388890A; uncharacterized protein	join(172713..173078,173093..173226,173321..173509,173763..173899,173996..174015)	Acanthamoeba castellanii str. Neff	14911594
ACA1_389000	CDS	ACA1_389000	NW_004457260.1	174499	175376	D	encoded by transcript ACA1_389000A; uncharacterized protein	join(174499..174565,174684..174723,174913..175296,175331..175376)	Acanthamoeba castellanii str. Neff	14911620
ACA1_389010	CDS	ACA1_389010	NW_004457260.1	175657	181630	D	encoded by transcript ACA1_389010A; protein kinase domain containing protein	join(175657..175809,175897..176102,176193..176356,176436..176641,176778..176996,177050..177178,177282..178362,178444..178676,178743..178876,178971..179251,179336..179437,179551..179673,179765..179867,179939..179994,180128..180262,180399..180494,180574..180660,180759..180879,180976..181630)	Acanthamoeba castellanii str. Neff	14911542
ACA1_389020	CDS	ACA1_389020	NW_004457260.1	181977	182614	R	encoded by transcript ACA1_389020A; uncharacterized protein	complement(join(181977..182271,182352..182614))	Acanthamoeba castellanii str. Neff	14911622
ACA1_389030	CDS	ACA1_389030	NW_004457260.1	183060	183754	D	encoded by transcript ACA1_389030A; uncharacterized protein	join(183060..183092,183170..183441,183556..183754)	Acanthamoeba castellanii str. Neff	14911623
ACA1_389040	CDS	ACA1_389040	NW_004457260.1	184935	185273	D	encoded by transcript ACA1_389040A; uncharacterized protein	184935..185273	Acanthamoeba castellanii str. Neff	14911668
ACA1_389050	CDS	ACA1_389050	NW_004457260.1	185282	185965	R	encoded by transcript ACA1_389050A; uncharacterized protein	complement(join(185282..185340,185643..185833,185913..185965))	Acanthamoeba castellanii str. Neff	14911541
ACA1_389060	CDS	ACA1_389060	NW_004457260.1	187338	188818	D	encoded by transcript ACA1_389060A; protein kinase family protein	join(187338..187358,187549..187644,187696..187923,188003..188080,188176..188284,188431..188510,188585..188818)	Acanthamoeba castellanii str. Neff	14911548
ACA1_389070	CDS	ACA1_389070	NW_004457260.1	189317	190410	R	encoded by transcript ACA1_389070A; Aminoglycoside 3N-acetyltransferase	complement(join(189317..189736,189818..190057,190128..190154,190249..190410))	Acanthamoeba castellanii str. Neff	14911580
ACA1_389080	CDS	ACA1_389080	NW_004457260.1	190569	193464	R	encoded by transcript ACA1_389080A; Fbox domain containing protein	complement(join(190569..190789,190860..191415,191540..191633,191723..191796,191898..191985,192064..192146,192246..192328,192415..192498,192642..192798,192909..193049,193151..193209,193335..193464))	Acanthamoeba castellanii str. Neff	14911664
ACA1_389090	CDS	ACA1_389090	NW_004457260.1	193629	194599	D	encoded by transcript ACA1_389090A; transcription initiation factor iid, 31kd subunit protein	join(193629..193829,194015..194599)	Acanthamoeba castellanii str. Neff	14911637
ACA1_389100	CDS	ACA1_389100	NW_004457260.1	195055	197152	D	encoded by transcript ACA1_389100A; diacylglycerylN,N,N-trimethylhomoserine synthesis protein	join(195055..195409,195687..195823,196013..196540,196626..196746,197031..197152)	Acanthamoeba castellanii str. Neff	14911604
ACA1_389110	CDS	ACA1_389110	NW_004457260.1	197375	198864	D	encoded by transcript ACA1_389110A; uncharacterized protein	join(197375..197830,197924..198080,198169..198465,198569..198636,198655..198864)	Acanthamoeba castellanii str. Neff	14911564
ACA1_389120	CDS	ACA1_389120	NW_004457260.1	200010	206469	D	encoded by transcript ACA1_389120A; DENN (AEX3) domain containing protein	join(200010..200090,200299..200355,200446..200632,200757..200829,200916..201021,201116..201278,201430..201717,201798..202441,202530..202649,202775..202929,203009..203103,203181..203325,203429..205153,205246..205827,205932..206469)	Acanthamoeba castellanii str. Neff	14911640
ACA1_389130	CDS	ACA1_389130	NW_004457260.1	206802	209458	D	encoded by transcript ACA1_389130A; BTB/POZ domain containing protein	join(206802..206949,207061..207141,207242..207304,207389..207510,207672..207886,208016..208151,208249..208431,208519..208635,208730..208785,208859..209008,209089..209238,209314..209458)	Acanthamoeba castellanii str. Neff	14911642
ACA1_389140	CDS	ACA1_389140	NW_004457260.1	209899	210987	R	encoded by transcript ACA1_389140A; zinc finger, C3HC4 type (RING finger) domain containing protein	complement(join(209899..210386,210570..210987))	Acanthamoeba castellanii str. Neff	14911670
ACA1_389150	CDS	ACA1_389150	NW_004457260.1	212185	213526	D	encoded by transcript ACA1_389150A; Tasp1 protein	join(212185..212333,212452..212916,212988..213468,213521..213526)	Acanthamoeba castellanii str. Neff	14911625
ACA1_389160	CDS	ACA1_389160	NW_004457260.1	213910	215146	D	encoded by transcript ACA1_389160A; Hypothetical protein	join(213910..213941,214162..214520,214650..215146)	Acanthamoeba castellanii str. Neff	14911588
ACA1_389170	CDS	ACA1_389170	NW_004457260.1	215874	218325	D	encoded by transcript ACA1_389170A; uncharacterized protein	join(215874..216010,216085..216170,216300..216410,216501..216793,216861..216964,217089..217415,217486..217550,217640..217738,217880..217971,218029..218136,218305..218325)	Acanthamoeba castellanii str. Neff	14911676
ACA1_389180	CDS	ACA1_389180	NW_004457260.1	218661	220790	D	encoded by transcript ACA1_389180A; uncharacterized protein	join(218661..218846,218922..218997,219072..219319,219481..219587,219676..219751,219966..220082,220164..220295,220374..220790)	Acanthamoeba castellanii str. Neff	14911630
ACA1_389290	CDS	ACA1_389290	NW_004457260.1	222514	225627	D	encoded by transcript ACA1_389290A; plasmamembrane proton-efflux P-type ATPase	join(222514..222709,222804..222975,223039..223123,223197..223472,223551..223883,223961..224114,224196..224281,224378..224454,224532..224668,224730..225093,225188..225352,225486..225627)	Acanthamoeba castellanii str. Neff	14911570
ACA1_389300	CDS	ACA1_389300	NW_004457260.1	225783	226235	R	encoded by transcript ACA1_389300A; complex 1 protein (lyr family) protein	complement(join(225783..225821,225905..225997,226095..226235))	Acanthamoeba castellanii str. Neff	14911617
ACA1_389310	CDS	ACA1_389310	NW_004457260.1	226504	227937	R	encoded by transcript ACA1_389310A; uncharacterized protein	complement(226504..227937)	Acanthamoeba castellanii str. Neff	14911557
ACA1_389320	CDS	ACA1_389320	NW_004457260.1	228419	230390	D	encoded by transcript ACA1_389320A; K+ channel tetramerization subfamily protein	join(228419..228509,228576..228649,228736..229178,229257..229400,229524..229801,229876..230003,230077..230131,230200..230390)	Acanthamoeba castellanii str. Neff	14911596
ACA1_389330	CDS	ACA1_389330	NW_004457260.1	230655	232630	D	encoded by transcript ACA1_389330A; Nicotinamide riboside kinase 1 family protein	join(230655..231011,231145..231240,231375..231518,231620..231682,231816..231869,231946..232046,232141..232236,232366..232630)	Acanthamoeba castellanii str. Neff	14911636
ACA1_389340	CDS	ACA1_389340	NW_004457260.1	233446	235112	D	encoded by transcript ACA1_389340A; uncharacterized protein	join(233446..233530,233601..233683,233750..233800,233976..234125,234205..234414,234529..234639,234738..235112)	Acanthamoeba castellanii str. Neff	14911632
ACA1_389350	CDS	ACA1_389350	NW_004457260.1	235409	236692	D	encoded by transcript ACA1_389350A; hydrolase, NUDIX domain containing protein	join(235409..235481,235572..235616,235729..235851,235941..236011,236135..236464,236543..236692)	Acanthamoeba castellanii str. Neff	14911635
ACA1_389360	CDS	ACA1_389360	NW_004457260.1	236737	238387	R	encoded by transcript ACA1_389360A; uncharacterized protein	complement(join(236737..236958,237092..237202,237314..237523,237604..237831,237973..238098,238132..238187,238303..238387))	Acanthamoeba castellanii str. Neff	14911578
ACA1_389370	CDS	ACA1_389370	NW_004457260.1	240134	240487	D	encoded by transcript ACA1_389370A; uncharacterized protein	240134..240487	Acanthamoeba castellanii str. Neff	14911657
ACA1_389380	CDS	ACA1_389380	NW_004457260.1	240701	242045	R	encoded by transcript ACA1_389380A; RNA ligase	complement(join(240701..241511,241616..241833,241944..242045))	Acanthamoeba castellanii str. Neff	14911629
ACA1_389390	CDS	ACA1_389390	NW_004457260.1	242444	243080	D	encoded by transcript ACA1_389390A; uncharacterized protein	join(242444..242470,242503..242644,242878..243080)	Acanthamoeba castellanii str. Neff	14911616
ACA1_389400	CDS	ACA1_389400	NW_004457260.1	243336	245427	D	encoded by transcript ACA1_389400A; transporter, major facilitator subfamily protein	join(243336..243487,243606..243781,243886..243972,244055..244158,244249..244671,244845..245166,245252..245427)	Acanthamoeba castellanii str. Neff	14911554
ACA1_389410	CDS	ACA1_389410	NW_004457260.1	245602	246276	R	encoded by transcript ACA1_389410A; ubiquitin domain containing protein	complement(245602..246276)	Acanthamoeba castellanii str. Neff	14911583
ACA1_389420	CDS	ACA1_389420	NW_004457260.1	246745	251978	R	encoded by transcript ACA1_389420A; Importin beta domain containing protein	complement(join(246745..246881,246994..247114,247185..247369,247453..247714,247811..247915,248058..248138,248252..248349,248505..248722,248855..248949,249061..249185,249284..249485,249568..249657,249763..250071,250141..250201,250332..250508,250545..250600,250705..250797,250975..251289,251417..251503,251635..251754,251889..251978))	Acanthamoeba castellanii str. Neff	14911671
ACA1_389430	CDS	ACA1_389430	NW_004457260.1	252176	253879	D	encoded by transcript ACA1_389430A; uncharacterized protein	join(252176..252204,252336..252384,252485..252524,252561..252589,252680..253085,253192..253247,253279..253302,253385..253676,253758..253879)	Acanthamoeba castellanii str. Neff	14911647
ACA1_389440	CDS	ACA1_389440	NW_004457260.1	254161	255504	D	encoded by transcript ACA1_389440A; proteasome subunit alpha type5, putative	join(254161..254174,254297..254378,254466..254660,254803..254910,255035..255199,255307..255504)	Acanthamoeba castellanii str. Neff	14911563
ACA1_389450	CDS	ACA1_389450	NW_004457260.1	255732	259398	D	encoded by transcript ACA1_389450A; uncharacterized protein	join(255732..255897,256009..256217,256327..256825,256895..257139,257236..257387,257472..257586,257653..257774,257862..258084,258150..258268,258365..258551,258698..258831,258906..259021,259118..259230,259309..259398)	Acanthamoeba castellanii str. Neff	14911587
ACA1_389460	CDS	ACA1_389460	NW_004457260.1	259500	261000	R	encoded by transcript ACA1_389460A; uncharacterized protein	complement(join(259500..259766,259857..259992,260109..260198,260291..260501,260586..260868,260950..261000))	Acanthamoeba castellanii str. Neff	14911590
ACA1_389470	CDS	ACA1_389470	NW_004457260.1	261407	264410	D	encoded by transcript ACA1_389470A; uncharacterized protein	join(261407..261496,261597..261706,261792..261964,262054..262203,262392..262447,262658..263141,263219..263337,263412..263512,263612..263799,263902..264410)	Acanthamoeba castellanii str. Neff	14911555
ACA1_389480	CDS	ACA1_389480	NW_004457260.1	264547	265614	D	encoded by transcript ACA1_389480A; oxidoreductaselike protein	join(264547..265013,265091..265304,265405..265614)	Acanthamoeba castellanii str. Neff	14911610
ACA1_389490	CDS	ACA1_389490	NW_004457260.1	266319	268347	R	encoded by transcript ACA1_389490A; RNA recognition motif domain containing protein	complement(join(266319..266985,267070..267243,267338..267598,267688..267751,267853..268098,268239..268347))	Acanthamoeba castellanii str. Neff	14911574
ACA1_389500	CDS	ACA1_389500	NW_004457260.1	268620	269287	D	encoded by transcript ACA1_389500A; uncharacterized protein	join(<268620..268798,268978..269287)	Acanthamoeba castellanii str. Neff	14911667
ACA1_389510	CDS	ACA1_389510	NW_004457260.1	269551	270747	D	encoded by transcript ACA1_389510A; uncharacterized protein	join(269551..269726,269929..269998,270111..270167,270392..270517,270640..270747)	Acanthamoeba castellanii str. Neff	14911641
ACA1_389520	CDS	ACA1_389520	NW_004457260.1	271532	272570	D	encoded by transcript ACA1_389520A; MAPEG family protein	join(271532..271597,271683..271825,271924..272050,272154..272250,272440..272570)	Acanthamoeba castellanii str. Neff	14911559
ACA1_389530	CDS	ACA1_389530	NW_004457260.1	273512	277682	R	encoded by transcript ACA1_389530A; uncharacterized protein	complement(join(273512..273713,273846..273891,274021..274159,275046..275232,275368..275413,275546..275684,275789..275869,276019..276147,276253..276330,276439..276491,276592..276689,276797..277023,277144..277235,277318..277402,277554..277682))	Acanthamoeba castellanii str. Neff	14911618
ACA1_389540	CDS	ACA1_389540	NW_004457260.1	277827	279805	R	encoded by transcript ACA1_389540A; transcriptional regulator, sir2 family	complement(join(277827..278038,278155..278266,278367..278495,278576..278669,278800..278858,279176..279284,279435..279548,279711..279805))	Acanthamoeba castellanii str. Neff	14911639
ACA1_389550	CDS	ACA1_389550	NW_004457260.1	280102	282953	D	encoded by transcript ACA1_389550A; uncharacterized protein	join(280102..280137,280227..280440,280712..280806,280969..281078,281167..281310,281375..281485,281585..281921,282002..282088,282163..282349,282504..282707,282742..282953)	Acanthamoeba castellanii str. Neff	14911577
ACA1_389560	CDS	ACA1_389560	NW_004457260.1	283156	286997	R	encoded by transcript ACA1_389560A; ATPbinding cassette, sub-family D (ALD), member 1, putative	complement(join(283156..283397,283512..283643,283743..283839,283996..284157,284275..284400,284514..284585,284686..284874,284991..285157,285303..285572,285651..285792,285917..286127,286199..286307,286405..286483,286558..286668,286812..286997))	Acanthamoeba castellanii str. Neff	14911569
ACA1_389570	CDS	ACA1_389570	NW_004457260.1	287303	287597	D	encoded by transcript ACA1_389570A; uncharacterized protein	join(287303..287444,287458..287597)	Acanthamoeba castellanii str. Neff	14911566
ACA1_389580	CDS	ACA1_389580	NW_004457260.1	287703	288146	D	encoded by transcript ACA1_389580A; uncharacterized protein	287703..288146	Acanthamoeba castellanii str. Neff	14911675
ACA1_389590	CDS	ACA1_389590	NW_004457260.1	288225	289431	R	encoded by transcript ACA1_389590A; uncharacterized protein	complement(join(288225..288382,288474..288577,288646..288760,288940..289053,289164..289431))	Acanthamoeba castellanii str. Neff	14911598
ACA1_389600	CDS	ACA1_389600	NW_004457260.1	289945	292084	D	encoded by transcript ACA1_389600A; Myotubularin related protein 14, putative	join(289945..290022,290094..290222,290366..290415,290441..290570,290859..291027,291148..291252,291352..291395,291572..291622,291698..291714,291808..292084)	Acanthamoeba castellanii str. Neff	14911589
ACA1_389610	CDS	ACA1_389610	NW_004457260.1	292356	293353	R	encoded by transcript ACA1_389610A; uncharacterized protein	complement(join(292356..292583,292620..292979,293094..293168,293270..293353))	Acanthamoeba castellanii str. Neff	14911621
ACA1_389620	CDS	ACA1_389620	NW_004457260.1	294116	297888	D	encoded by transcript ACA1_389620A; SNF2 family Nterminal domain containing protein	join(294116..294302,294354..294871,294965..295099,295122..295209,295291..295401,295471..295596,295703..295772,295873..295979,296069..296129,296198..296445,296529..296731,296883..296957,297035..297112,297255..297330,297419..297476,297561..297622,297722..297888)	Acanthamoeba castellanii str. Neff	14911659
ACA1_389630	CDS	ACA1_389630	NW_004457260.1	297945	299932	D	encoded by transcript ACA1_389630A; uncharacterized protein	join(297945..298044,298128..298192,298328..298414,298664..299005,299099..299186,299340..299426,299506..299636,299753..299932)	Acanthamoeba castellanii str. Neff	14911674
ACA1_389640	CDS	ACA1_389640	NW_004457260.1	300044	300748	D	encoded by transcript ACA1_389640A; uncharacterized protein	join(300044..300357,300553..300748)	Acanthamoeba castellanii str. Neff	14911624
ACA1_389650	CDS	ACA1_389650	NW_004457260.1	300842	301774	D	encoded by transcript ACA1_389650A; uncharacterized protein	join(300842..300920,301176..301444,301538..301774)	Acanthamoeba castellanii str. Neff	14911600
ACA1_389660	CDS	ACA1_389660	NW_004457260.1	301837	302358	D	encoded by transcript ACA1_389660A; bromodomain domain containing protein	join(301837..301887,301965..302093,302179..302358)	Acanthamoeba castellanii str. Neff	14911550
ACA1_389670	CDS	ACA1_389670	NW_004457260.1	302524	302813	D	encoded by transcript ACA1_389670A; uncharacterized protein	join(302524..302568,302643..302813)	Acanthamoeba castellanii str. Neff	14911660
ACA1_389680	CDS	ACA1_389680	NW_004457260.1	304516	308601	R	encoded by transcript ACA1_389680A; GCrich sequence DNA-binding factor-like protein	complement(join(304516..304756,304870..305012,305083..305211,305300..305506,305642..305805,305972..306210,306354..306610,306708..306898,306962..307088,307200..307360,307458..307652,307765..307865,307963..308127,308227..308285,308365..308430,308548..308601))	Acanthamoeba castellanii str. Neff	14911572
ACA1_389690	CDS	ACA1_389690	NW_004457260.1	308783	312309	R	encoded by transcript ACA1_389690A; Znfinger in Ran binding protein and others domain containing protein	complement(join(308783..308899,308994..309098,309196..309282,309377..309562,309675..309804,309892..310079,310228..310399,310515..310900,311014..311132,311237..311539,311670..312309))	Acanthamoeba castellanii str. Neff	14911666
ACA1_389700	CDS	ACA1_389700	NW_004457260.1	313017	314398	D	encoded by transcript ACA1_389700A; thiolase, Cterminal domain containing protein	join(313017..313334,313608..313672,313763..313916,313999..314142,314267..314398)	Acanthamoeba castellanii str. Neff	14911547
ACA1_389710	CDS	ACA1_389710	NW_004457260.1	314465	314921	D	encoded by transcript ACA1_389710A; uncharacterized protein	join(314465..314595,314834..314921)	Acanthamoeba castellanii str. Neff	14911558
ACA1_389720	CDS	ACA1_389720	NW_004457260.1	315203	316363	R	encoded by transcript ACA1_389720A; EGFlike domain containing protein	complement(join(315203..315738,315816..315926,315988..316076,316161..316363))	Acanthamoeba castellanii str. Neff	14911599
ACA1_389730	CDS	ACA1_389730	NW_004457260.1	319528	319848	R	encoded by transcript ACA1_389730A; fatty acid elongase	complement(319528..319848)	Acanthamoeba castellanii str. Neff	14911665
ACA1_351140	CDS	ACA1_351140	NW_004457259.1	640	1588	D	encoded by transcript ACA1_351140A; uncharacterized protein	join(640..796,898..1295,1361..1588)	Acanthamoeba castellanii str. Neff	14911522
ACA1_351150	CDS	ACA1_351150	NW_004457259.1	1652	3379	R	encoded by transcript ACA1_351150A; kinase, pfkB superfamily protein	complement(join(1652..1912,2010..2246,2337..2438,2495..2564,2646..2759,2839..2912,2995..3076,3155..3214,3291..3379))	Acanthamoeba castellanii str. Neff	14911523
ACA1_351270	CDS	ACA1_351270	NW_004457259.1	10171	10746	R	encoded by transcript ACA1_351270A; Rho GTPase activating protein	complement(join(10171..10322,10433..10507,10632..10746))	Acanthamoeba castellanii str. Neff	14911524
ACA1_351280	CDS	ACA1_351280	NW_004457259.1	11007	11755	R	encoded by transcript ACA1_351280A; 3'5' exonuclease domain containing protein	complement(join(11007..11618,11696..11755))	Acanthamoeba castellanii str. Neff	14911528
ACA1_351290	CDS	ACA1_351290	NW_004457259.1	12280	12879	D	encoded by transcript ACA1_351290A; uncharacterized protein	join(12280..12465,12534..12659,12736..12879)	Acanthamoeba castellanii str. Neff	14911536
ACA1_351300	CDS	ACA1_351300	NW_004457259.1	12957	13545	R	encoded by transcript ACA1_351300A; uncharacterized protein	complement(join(12957..13414,13476..13545))	Acanthamoeba castellanii str. Neff	14911519
ACA1_351310	CDS	ACA1_351310	NW_004457259.1	13893	15289	D	encoded by transcript ACA1_351310A; uncharacterized protein	join(13893..14000,14074..14355,14402..14547,14612..14820,14835..15289)	Acanthamoeba castellanii str. Neff	14911525
ACA1_351320	CDS	ACA1_351320	NW_004457259.1	15434	16203	R	encoded by transcript ACA1_351320A; uncharacterized protein	complement(join(15434..15657,15767..15882,15977..16203))	Acanthamoeba castellanii str. Neff	14911529
ACA1_351330	CDS	ACA1_351330	NW_004457259.1	16332	17056	R	encoded by transcript ACA1_351330A; uncharacterized protein	complement(join(16332..16770,16860..17056))	Acanthamoeba castellanii str. Neff	14911520
ACA1_351440	CDS	ACA1_351440	NW_004457259.1	18346	19713	R	encoded by transcript ACA1_351440A; ubiquitin interaction motif domain containing protein	complement(join(<18346..18490,18574..18861,19032..19365,19455..19713))	Acanthamoeba castellanii str. Neff	14911527
ACA1_351450	CDS	ACA1_351450	NW_004457259.1	20282	23099	R	encoded by transcript ACA1_351450A; uncharacterized protein	complement(join(20282..20385,20457..20638,21174..21273,21338..21414,21491..21567,21685..22048,22155..22266,22350..22402,22484..22576,22656..22708,22770..22949,23016..23099))	Acanthamoeba castellanii str. Neff	14911530
ACA1_351660	CDS	ACA1_351660	NW_004457259.1	25430	26619	R	encoded by transcript ACA1_351660A; leucine rich repeat domain containing protein	complement(join(25430..25930,26001..26090,26162..26296,26391..26471,26575..26619))	Acanthamoeba castellanii str. Neff	14911533
ACA1_351770	CDS	ACA1_351770	NW_004457259.1	27236	27615	D	encoded by transcript ACA1_351770A; uncharacterized protein	join(27236..27300,27311..27390,27464..27615)	Acanthamoeba castellanii str. Neff	14911538
ACA1_351780	CDS	ACA1_351780	NW_004457259.1	27805	29003	D	encoded by transcript ACA1_351780A; uncharacterized protein	join(27805..28344,28415..28530,28640..29003)	Acanthamoeba castellanii str. Neff	14911535
ACA1_351790	CDS	ACA1_351790	NW_004457259.1	29382	29862	D	encoded by transcript ACA1_351790A; uncharacterized protein	join(29382..29625,29675..29862)	Acanthamoeba castellanii str. Neff	14911537
ACA1_351900	CDS	ACA1_351900	NW_004457259.1	31605	32429	D	encoded by transcript ACA1_351900A; uncharacterized protein	join(31605..32185,32294..32429)	Acanthamoeba castellanii str. Neff	14911532
ACA1_351910	CDS	ACA1_351910	NW_004457259.1	32534	33550	R	encoded by transcript ACA1_351910A; uncharacterized protein	complement(join(32534..32808,32884..33067,33149..33550))	Acanthamoeba castellanii str. Neff	14911540
ACA1_351920	CDS	ACA1_351920	NW_004457259.1	33829	36714	D	encoded by transcript ACA1_351920A; von Willebrand factor type A domain containing protein	join(33829..33904,33968..34008,34083..34157,34273..34459,34534..34706,34795..35007,35077..35540,35633..35937,36026..36714)	Acanthamoeba castellanii str. Neff	14911531
ACA1_351930	CDS	ACA1_351930	NW_004457259.1	36884	37578	R	encoded by transcript ACA1_351930A; uncharacterized protein	complement(join(36884..36906,37129..37199,37295..37578))	Acanthamoeba castellanii str. Neff	14911526
ACA1_352040	CDS	ACA1_352040	NW_004457259.1	38506	41267	R	encoded by transcript ACA1_352040A; ABC transporter transmembrane region domain containing protein	complement(join(38506..38539,38599..38715,38795..38909,39019..39219,39335..39382,39499..39609,39687..39797,39881..40004,40090..40223,40331..40439,40509..40582,40661..40769,40842..41267))	Acanthamoeba castellanii str. Neff	14911534
ACA1_352050	CDS	ACA1_352050	NW_004457259.1	41767	43259	D	encoded by transcript ACA1_352050A; succinate dehydrogenase and fumarate reductase ironsulfur protein	join(41767..41887,41956..41994,42059..42117,42194..42279,42367..42418,42478..42556,42646..42692,42777..42959,43036..43109,43193..>43259)	Acanthamoeba castellanii str. Neff	14911521
ACA1_327700	CDS	ACA1_327700	NW_004457258.1	5779	6546	R	encoded by transcript ACA1_327700A; uncharacterized protein	complement(join(<5779..5970,6085..6187,6433..>6546))	Acanthamoeba castellanii str. Neff	14911518
ACA1_299580	CDS	ACA1_299580	NW_004457257.1	6	1536	D	encoded by transcript ACA1_299580A; serine/threonine protein kinase	join(6..186,256..741,811..1016,1126..1536)	Acanthamoeba castellanii str. Neff	14911515
ACA1_299690	CDS	ACA1_299690	NW_004457257.1	5819	6608	D	encoded by transcript ACA1_299690A; uncharacterized protein	join(<5819..6068,6095..6182,6554..6608)	Acanthamoeba castellanii str. Neff	14911516
ACA1_299800	CDS	ACA1_299800	NW_004457257.1	10028	10846	D	encoded by transcript ACA1_299800A; serine/threonine protein kinase, putative	join(10028..10092,10189..10337,10719..10846)	Acanthamoeba castellanii str. Neff	14911517
ACA1_299810	CDS	ACA1_299810	NW_004457257.1	11233	11840	D	encoded by transcript ACA1_299810A; uncharacterized protein	join(11233..11487,11571..11840)	Acanthamoeba castellanii str. Neff	14911513
ACA1_299820	CDS	ACA1_299820	NW_004457257.1	11927	14362	D	encoded by transcript ACA1_299820A; SWIB/MDM2 domain containing protein	join(11927..12039,12107..12155,12230..12355,12462..12533,12685..12744,12858..12977,13088..13288,13376..13536,13683..13794,13915..14014,14092..14207,14318..14362)	Acanthamoeba castellanii str. Neff	14911512
ACA1_299830	CDS	ACA1_299830	NW_004457257.1	14470	14673	R	encoded by transcript ACA1_299830A; sulfur controller 2, putative	complement(<14470..>14673)	Acanthamoeba castellanii str. Neff	14911514
ACA1_334640	CDS	ACA1_334640	NW_004457256.1	178	850	D	encoded by transcript ACA1_334640A; uncharacterized protein	join(178..245,327..488,575..660,723..850)	Acanthamoeba castellanii str. Neff	14911510
ACA1_334650	CDS	ACA1_334650	NW_004457256.1	1010	2405	D	encoded by transcript ACA1_334650A; WD domain, Gbeta repeat-containing protein	join(1010..1053,1123..1228,1299..1392,1452..1559,1627..1705,1776..1918,1996..2405)	Acanthamoeba castellanii str. Neff	14911506
ACA1_334660	CDS	ACA1_334660	NW_004457256.1	2595	3580	D	encoded by transcript ACA1_334660A; uncharacterized protein	join(2595..2670,2770..3012,3091..3237,3331..3405,3513..>3580)	Acanthamoeba castellanii str. Neff	14911508
ACA1_334770	CDS	ACA1_334770	NW_004457256.1	7294	8120	R	encoded by transcript ACA1_334770A; uncharacterized protein	complement(join(<7294..7820,7916..8120))	Acanthamoeba castellanii str. Neff	14911509
ACA1_334780	CDS	ACA1_334780	NW_004457256.1	8623	9053	D	encoded by transcript ACA1_334780A; elongation factor 2, putative	join(8623..8661,8760..9053)	Acanthamoeba castellanii str. Neff	14911511
ACA1_334790	CDS	ACA1_334790	NW_004457256.1	9843	10355	R	encoded by transcript ACA1_334790A; ribosomal protein L32, putative	complement(join(9843..10154,10266..10355))	Acanthamoeba castellanii str. Neff	14911507
ACA1_160500	CDS	ACA1_160500	NW_004457255.1	95	307	R	encoded by transcript ACA1_160500A; uncharacterized protein	complement(<95..307)	Acanthamoeba castellanii str. Neff	14911503
ACA1_160510	CDS	ACA1_160510	NW_004457255.1	796	1703	D	encoded by transcript ACA1_160510A; uncharacterized protein	join(796..1209,1325..1516,1551..1628,1674..1703)	Acanthamoeba castellanii str. Neff	14911497
ACA1_160620	CDS	ACA1_160620	NW_004457255.1	2532	3709	D	encoded by transcript ACA1_160620A; Autophagy-related protein 27 protein	join(2532..2709,2805..2957,3041..3308,3399..3525,3677..3709)	Acanthamoeba castellanii str. Neff	14911500
ACA1_160630	CDS	ACA1_160630	NW_004457255.1	3988	4680	D	encoded by transcript ACA1_160630A; uncharacterized protein	join(3988..4134,4233..4313,4540..4680)	Acanthamoeba castellanii str. Neff	14911505
ACA1_160740	CDS	ACA1_160740	NW_004457255.1	5002	6285	D	encoded by transcript ACA1_160740A; sodium/calcium exchanger protein	join(5002..5111,5281..5371,5457..5543,5653..5739,5911..6033,6115..6285)	Acanthamoeba castellanii str. Neff	14911496
ACA1_160750	CDS	ACA1_160750	NW_004457255.1	6840	7872	D	encoded by transcript ACA1_160750A; uncharacterized protein	join(6840..6867,7095..7201,7355..7507,7606..7872)	Acanthamoeba castellanii str. Neff	14911499
ACA1_160760	CDS	ACA1_160760	NW_004457255.1	8087	8818	R	encoded by transcript ACA1_160760A; Clathrin coat assembly protein AP50, putative	complement(join(8087..8167,8268..8357,8510..>8818))	Acanthamoeba castellanii str. Neff	14911502
ACA1_160870	CDS	ACA1_160870	NW_004457255.1	10322	11485	D	encoded by transcript ACA1_160870A; uncharacterized protein	join(<10322..10483,10566..10747,10869..10965,11032..11261,11342..11410,11470..11485)	Acanthamoeba castellanii str. Neff	14911498
ACA1_160880	CDS	ACA1_160880	NW_004457255.1	11688	12882	R	encoded by transcript ACA1_160880A; clathrin adaptor complex small chain subfamily protein	complement(join(11688..11706,11953..12104,12246..12343,12466..12731,12809..12882))	Acanthamoeba castellanii str. Neff	14911504
ACA1_160890	CDS	ACA1_160890	NW_004457255.1	13124	13492	R	encoded by transcript ACA1_160890A; uncharacterized protein	complement(13124..>13492)	Acanthamoeba castellanii str. Neff	14911501
ACA1_009890	CDS	ACA1_009890	NW_004457254.1	127	2689	R	encoded by transcript ACA1_009890A; glucose repression mediator protein	complement(join(<127..244,339..623,711..804,910..1063,1209..1301,1407..1586,1696..1845,2120..2256,2623..2689))	Acanthamoeba castellanii str. Neff	14911491
ACA1_009900	CDS	ACA1_009900	NW_004457254.1	3476	4753	R	encoded by transcript ACA1_009900A; uncharacterized protein	complement(join(3476..3849,3936..4040,4168..4753))	Acanthamoeba castellanii str. Neff	14911490
ACA1_009910	CDS	ACA1_009910	NW_004457254.1	5305	8024	D	encoded by transcript ACA1_009910A; glutamate-tRNA ligase	join(5305..5704,5797..5882,5986..6058,6160..6257,6336..6413,6483..6575,6720..6869,6956..7060,7187..7282,7568..7688,7768..8024)	Acanthamoeba castellanii str. Neff	14911492
ACA1_009920	CDS	ACA1_009920	NW_004457254.1	8070	10506	R	encoded by transcript ACA1_009920A; Ophosphoseryl-tRNA(Sec) selenium transferase	complement(join(8070..8349,8509..8596,8666..8759,8892..9043,9134..9203,9343..9437,9563..9703,9859..9937,10016..10167,10219..10395,10476..10506))	Acanthamoeba castellanii str. Neff	14911494
ACA1_009930	CDS	ACA1_009930	NW_004457254.1	11053	13652	D	encoded by transcript ACA1_009930A; acylCoA dehydrogenase, putative	join(11053..11298,11384..11461,11572..11657,11800..11911,12059..12139,12228..12428,12511..12586,12689..12811,12897..13249,13347..13460,13548..13652)	Acanthamoeba castellanii str. Neff	14911489
ACA1_009940	CDS	ACA1_009940	NW_004457254.1	13755	14769	D	encoded by transcript ACA1_009940A; acylCoA oxidase	join(13755..13806,13972..14184,14311..14468,14608..14769)	Acanthamoeba castellanii str. Neff	14911493
ACA1_010050	CDS	ACA1_010050	NW_004457254.1	17531	18138	R	encoded by transcript ACA1_010050A; uncharacterized protein	complement(17531..>18138)	Acanthamoeba castellanii str. Neff	14911495
ACA1_344350	CDS	ACA1_344350	NW_004457253.1	13000	13302	R	encoded by transcript ACA1_344350A; uncharacterized protein	complement(13000..13302)	Acanthamoeba castellanii str. Neff	14911486
ACA1_344360	CDS	ACA1_344360	NW_004457253.1	14156	14538	R	encoded by transcript ACA1_344360A; uncharacterized protein	complement(join(14156..14296,14365..14538))	Acanthamoeba castellanii str. Neff	14911487
ACA1_344470	CDS	ACA1_344470	NW_004457253.1	18251	18669	R	encoded by transcript ACA1_344470A; replication factor c subunit	complement(join(18251..18310,18393..18503,18586..18669))	Acanthamoeba castellanii str. Neff	14911488
ACA1_344480	CDS	ACA1_344480	NW_004457253.1	19013	19828	D	encoded by transcript ACA1_344480A; uncharacterized protein	join(19013..19394,19496..19658,19735..19828)	Acanthamoeba castellanii str. Neff	14911485
ACA1_048030	CDS	ACA1_048030	NW_004457252.1	23	2711	D	encoded by transcript ACA1_048030A; generic methyltransferase	join(<23..207,342..476,576..680,793..893,984..1117,1188..1369,1430..1627,1745..1845,1955..2201,2321..2445,2560..2711)	Acanthamoeba castellanii str. Neff	14911436
ACA1_048040	CDS	ACA1_048040	NW_004457252.1	3359	4992	D	encoded by transcript ACA1_048040A; zinc finger, c2h2 type domain containing protein	join(3359..3559,3632..3982,4161..4406,4487..4624,4753..4992)	Acanthamoeba castellanii str. Neff	14911434
ACA1_048050	CDS	ACA1_048050	NW_004457252.1	5403	5696	R	encoded by transcript ACA1_048050A; uncharacterized protein	complement(5403..5696)	Acanthamoeba castellanii str. Neff	14911480
ACA1_048060	CDS	ACA1_048060	NW_004457252.1	5921	11353	R	encoded by transcript ACA1_048060A; Vps51/Vps67 protein	complement(join(5921..6201,6281..6393,6539..6660,6788..7055,7128..7317,7397..7501,7605..7710,7837..8082,8168..8466,8557..8784,8864..9026,9116..9227,9339..9446,9565..9760,9826..9973,10121..10228,10360..10470,10558..10676,10828..10934,11044..11088,11247..11353))	Acanthamoeba castellanii str. Neff	14911450
ACA1_048070	CDS	ACA1_048070	NW_004457252.1	11599	13423	R	encoded by transcript ACA1_048070A; MORN repeat domain containing protein	complement(join(11599..12042,12122..12481,12566..12803,12924..13270,13334..13423))	Acanthamoeba castellanii str. Neff	14911478
ACA1_048080	CDS	ACA1_048080	NW_004457252.1	14115	17794	R	encoded by transcript ACA1_048080A; RNA binding protein, putative	complement(join(14115..14185,14284..14432,14529..14964,15040..15265,15329..15481,15590..15733,15857..16012,16117..16788,16923..17042,17148..17266,17368..17437,17531..17657,17721..17794))	Acanthamoeba castellanii str. Neff	14911468
ACA1_048090	CDS	ACA1_048090	NW_004457252.1	18458	19451	D	encoded by transcript ACA1_048090A; uncharacterized protein	join(<18458..18556,18636..18781,18848..18947,19050..19142,19212..19451)	Acanthamoeba castellanii str. Neff	14911473
ACA1_048100	CDS	ACA1_048100	NW_004457252.1	19883	21028	D	encoded by transcript ACA1_048100A; Mimivirus related hypothetical protein	19883..21028	Acanthamoeba castellanii str. Neff	14911460
ACA1_048110	CDS	ACA1_048110	NW_004457252.1	21741	24764	R	encoded by transcript ACA1_048110A; serine carboxypeptidase s28 protein	complement(join(21741..21937,22111..22237,22330..22456,22527..22660,22745..22858,22949..23044,23127..23317,23396..23552,23639..23693,23773..23872,23983..24054,24143..24254,24513..24764))	Acanthamoeba castellanii str. Neff	14911453
ACA1_048120	CDS	ACA1_048120	NW_004457252.1	25384	28981	D	encoded by transcript ACA1_048120A; uncharacterized protein	join(25384..25805,25939..26014,26141..26213,26282..26359,26457..26521,26611..26679,26781..26906,26979..27047,27209..27430,27679..27742,28047..28209,28295..28354,28379..28866,28938..28981)	Acanthamoeba castellanii str. Neff	14911454
ACA1_048130	CDS	ACA1_048130	NW_004457252.1	29358	30741	R	encoded by transcript ACA1_048130A; charged multivesicular body protein, putative	complement(join(29358..29419,29477..29549,29678..29761,29855..29941,30038..30103,30267..30350,30436..30504,30625..30741))	Acanthamoeba castellanii str. Neff	14911481
ACA1_048140	CDS	ACA1_048140	NW_004457252.1	31198	33467	D	encoded by transcript ACA1_048140A; Membrane protein (cytomegalovirus gHreceptor) family	join(31198..31229,31256..31369,31492..31540,31605..31822,31901..31964,32028..32108,32209..32257,32374..32541,32600..32685,32773..32967,33050..33121,33194..33342,33434..33467)	Acanthamoeba castellanii str. Neff	14911470
ACA1_048150	CDS	ACA1_048150	NW_004457252.1	33727	39349	D	encoded by transcript ACA1_048150A; uncharacterized protein	join(33727..33978,34057..34239,34346..34459,34537..34840,34904..35021,35137..35297,35438..35862,35930..36001,36090..36225,36321..36449,36537..36718,36825..36971,37088..37279,37396..37602,37699..37954,38035..38177,38285..38814,38924..39036,39168..39349)	Acanthamoeba castellanii str. Neff	14911484
ACA1_048160	CDS	ACA1_048160	NW_004457252.1	39653	41684	D	encoded by transcript ACA1_048160A; uncharacterized protein	join(39653..39719,39913..40072,40230..40381,40462..40509,40598..40712,40828..40933,41114..41228,41379..41524,41658..41684)	Acanthamoeba castellanii str. Neff	14911459
ACA1_048170	CDS	ACA1_048170	NW_004457252.1	42210	44569	R	encoded by transcript ACA1_048170A; hydroxymethylglutarylCoA synthase	complement(join(42210..42348,42447..42621,42695..42947,43059..43172,43273..43554,43620..43681,43760..43909,43986..44090,44308..44569))	Acanthamoeba castellanii str. Neff	14911452
ACA1_048180	CDS	ACA1_048180	NW_004457252.1	45262	50206	R	encoded by transcript ACA1_048180A; Dual specificity protein kinase	complement(join(45262..45407,45493..45640,45659..45731,45832..46006,46123..46303,46610..46858,46965..47054,47221..47337,47449..48201,48309..48480,48617..48768,48860..49280,49364..49536,49631..49753,49825..49869,49991..50206))	Acanthamoeba castellanii str. Neff	14911464
ACA1_048200	CDS	ACA1_048200	NW_004457252.1	54560	55895	R	encoded by transcript ACA1_048200A; proteasome endopeptidase subunit, putative	complement(join(54560..54678,54799..55003,55108..55349,55555..55699,55779..55895))	Acanthamoeba castellanii str. Neff	14911439
ACA1_048210	CDS	ACA1_048210	NW_004457252.1	56515	57351	D	encoded by transcript ACA1_048210A; ribosomal protein S5, putative	join(56515..56541,56562..56802,56876..57351)	Acanthamoeba castellanii str. Neff	14911471
ACA1_048220	CDS	ACA1_048220	NW_004457252.1	57751	58311	R	encoded by transcript ACA1_048220A; uncharacterized protein	complement(57751..58311)	Acanthamoeba castellanii str. Neff	14911438
ACA1_048230	CDS	ACA1_048230	NW_004457252.1	59437	61941	D	encoded by transcript ACA1_048230A; Dual specificity tyrosinephosphorylation-regulated kinase, putative	join(<59437..60021,60119..60422,60506..60708,60796..60879,60963..61031,61096..61311,61426..61941)	Acanthamoeba castellanii str. Neff	14911443
ACA1_048240	CDS	ACA1_048240	NW_004457252.1	62133	64626	R	encoded by transcript ACA1_048240A; adipose-regulatory protein (Seipin) protein	complement(join(62133..62862,62984..63081,63211..63327,63442..63509,63619..63818,63944..64075,64201..64379,64615..64626))	Acanthamoeba castellanii str. Neff	14911451
ACA1_048250	CDS	ACA1_048250	NW_004457252.1	65451	69711	D	encoded by transcript ACA1_048250A; RhoGAP domain containing protein	join(65451..65517,65629..65724,65879..65940,66109..66177,66274..66381,66467..66688,66800..66935,67023..67102,67218..67337,67441..67574,67778..68048,68136..68493,68616..68720,68809..68886,68984..69243,69322..69402,69484..69570,69658..69711)	Acanthamoeba castellanii str. Neff	14911465
ACA1_048260	CDS	ACA1_048260	NW_004457252.1	70398	71048	D	encoded by transcript ACA1_048260A; uncharacterized protein	70398..71048	Acanthamoeba castellanii str. Neff	14911477
ACA1_048370	CDS	ACA1_048370	NW_004457252.1	71218	74708	D	encoded by transcript ACA1_048370A; GTPaseactivator protein	join(71218..71225,71340..71452,71527..71683,71787..71888,72003..72160,72251..72426,72525..72852,72984..73231,73344..73747,73886..74276,74478..74708)	Acanthamoeba castellanii str. Neff	14911474
ACA1_048380	CDS	ACA1_048380	NW_004457252.1	74168	75362	R	encoded by transcript ACA1_048380A; uncharacterized protein	complement(join(74168..74252,74338..74379,74503..74840,75029..75184,75285..75362))	Acanthamoeba castellanii str. Neff	14911445
ACA1_048390	CDS	ACA1_048390	NW_004457252.1	75370	76511	D	encoded by transcript ACA1_048390A; domain found in dishevelled, egl10, and pleckstrin domain containing protein	join(75370..75407,75562..75697,75788..75905,75975..76139,76222..76302,76384..76511)	Acanthamoeba castellanii str. Neff	14911437
ACA1_048400	CDS	ACA1_048400	NW_004457252.1	77052	79115	D	encoded by transcript ACA1_048400A; rieske [2fe2s] domain containing protein	join(77052..77291,77457..77759,77881..78360,78442..78640,78761..78882,79005..79115)	Acanthamoeba castellanii str. Neff	14911432
ACA1_048410	CDS	ACA1_048410	NW_004457252.1	79872	83141	D	encoded by transcript ACA1_048410A; AcylCoA oxidase	join(79872..79916,79956..80219,80364..80530,80634..81058,81186..81349,81492..81609,81761..81880,81963..81975,82009..82100,82232..82314,82433..82599,82743..82873,82978..83141)	Acanthamoeba castellanii str. Neff	14911475
ACA1_048420	CDS	ACA1_048420	NW_004457252.1	83285	88171	R	encoded by transcript ACA1_048420A; uncharacterized protein	complement(join(83285..85041,85131..85728,85851..85964,86049..87606,87794..87912,87985..88102,88161..88171))	Acanthamoeba castellanii str. Neff	14911469
ACA1_048430	CDS	ACA1_048430	NW_004457252.1	88405	93145	D	encoded by transcript ACA1_048430A; uncharacterized protein	join(88405..88410,88525..88583,88659..88738,88804..88890,89000..89093,89193..89326,89421..89485,89599..89692,89828..89963,90043..90163,90349..90591,90659..90866,90960..91062,91160..91268,91396..91506,91592..91678,91783..91854,91930..92049,92138..93145)	Acanthamoeba castellanii str. Neff	14911463
ACA1_048440	CDS	ACA1_048440	NW_004457252.1	93536	96330	R	encoded by transcript ACA1_048440A; uncharacterized protein	complement(join(93536..94023,94172..94333,94441..94552,94651..94757,94862..94961,95111..95175,95328..96330))	Acanthamoeba castellanii str. Neff	14911456
ACA1_048450	CDS	ACA1_048450	NW_004457252.1	96783	99365	R	encoded by transcript ACA1_048450A; HEAT repeat domain containing protein	complement(join(96783..96971,97050..97183,97365..97652,97874..98737,98845..99199,99273..99365))	Acanthamoeba castellanii str. Neff	14911446
ACA1_048470	CDS	ACA1_048470	NW_004457252.1	103732	118659	R	encoded by transcript ACA1_048470A; HECTdomain (ubiquitin-transferase) domain containing protein	complement(join(103732..104328,104471..104604,104699..104777,104877..104973,105123..105259,105381..105496,105671..106418,106540..106705,106790..106835,106870..107185,107297..107419,107558..107635,107803..107955,108140..108295,108452..108645,108828..108910,109048..109102,109209..109391,109458..110445,110480..111022,111205..111330,111448..111565,111661..111844,111976..112141,112264..112442,112574..112676,112812..112928,112977..113102,113242..113686,113861..113955,114117..114267,114341..114593,114690..115205,115338..115422,115532..115679,115773..115905,116010..116172,116259..116343,116497..117258,117348..117522,117610..117689,117738..117765,117797..118312,118458..118659))	Acanthamoeba castellanii str. Neff	14911448
ACA1_048480	CDS	ACA1_048480	NW_004457252.1	118776	122848	R	encoded by transcript ACA1_048480A; uncharacterized protein	complement(join(118776..118912,118995..119085,119233..119327,119460..119592,119773..119835,119881..120008,120091..120206,120336..120510,120592..120732,120903..121067,121182..121305,121401..121541,121642..121719,121837..121947,122113..122196,122295..122387,122540..122645,122766..122848))	Acanthamoeba castellanii str. Neff	14911461
ACA1_048490	CDS	ACA1_048490	NW_004457252.1	123085	127280	D	encoded by transcript ACA1_048490A; alphaCOP, putative	join(123085..123238,123311..123652,123726..123935,124162..125177,125271..127152,127231..127280)	Acanthamoeba castellanii str. Neff	14911447
ACA1_048500	CDS	ACA1_048500	NW_004457252.1	127597	132606	R	encoded by transcript ACA1_048500A; inorganic anion transporter, sulfate permease (SulP) subfamily protein	complement(join(127597..128205,128318..128513,128653..128696,128786..128920,129042..129229,129325..129414,129514..129628,129813..129946,130072..130267,130392..130498,130592..130700,131049..131198,131385..131526,131642..131705,131941..132048,132210..132606))	Acanthamoeba castellanii str. Neff	14911457
ACA1_048510	CDS	ACA1_048510	NW_004457252.1	132856	136633	D	encoded by transcript ACA1_048510A; uncharacterized protein	join(132856..133191,133272..133325,133406..133606,133730..133905,134029..134170,134538..134612,134749..134855,134924..135014,135192..135276,135386..135521,135591..135720,135794..135912,136096..136288,136382..136633)	Acanthamoeba castellanii str. Neff	14911472
ACA1_048520	CDS	ACA1_048520	NW_004457252.1	136674	138217	R	encoded by transcript ACA1_048520A; carrier superfamily protein	complement(join(136674..136811,136925..137098,137212..137323,137379..137856,137964..138033,138095..138217))	Acanthamoeba castellanii str. Neff	14911458
ACA1_048530	CDS	ACA1_048530	NW_004457252.1	138751	139369	D	encoded by transcript ACA1_048530A; copper/zinc superoxide dismutase	join(138751..139147,139293..139369)	Acanthamoeba castellanii str. Neff	14911466
ACA1_048540	CDS	ACA1_048540	NW_004457252.1	139721	141769	D	encoded by transcript ACA1_048540A; uncharacterized protein	join(139721..141505,141677..141769)	Acanthamoeba castellanii str. Neff	14911433
ACA1_048550	CDS	ACA1_048550	NW_004457252.1	142312	147146	R	encoded by transcript ACA1_048550A; tetratricopeptide repeat domain containing protein	complement(join(142312..143037,143142..143786,143859..144192,144335..144409,144439..144532,144695..144825,145004..145522,145607..146091,146199..146299,146423..146626,146726..146792,146892..147146))	Acanthamoeba castellanii str. Neff	14911444
ACA1_048560	CDS	ACA1_048560	NW_004457252.1	147299	148847	D	encoded by transcript ACA1_048560A; glutaredoxin, putative	join(147299..147463,147564..147638,147763..147988,148085..148326,148430..148533,148634..148847)	Acanthamoeba castellanii str. Neff	14911476
ACA1_048590	CDS	ACA1_048590	NW_004457252.1	158256	160168	R	encoded by transcript ACA1_048590A; sugar transport protein	complement(join(158256..158425,158588..159004,159084..159248,159361..159525,159600..159826,159975..160168))	Acanthamoeba castellanii str. Neff	14911467
ACA1_048600	CDS	ACA1_048600	NW_004457252.1	160197	162223	R	encoded by transcript ACA1_048600A; major facilitator superfamily MFS_1, putative	complement(join(160197..160216,160254..160334,160461..160547,160805..160903,161003..161091,161250..161328,161424..161517,161621..161708,161840..161931,162074..162223))	Acanthamoeba castellanii str. Neff	14911435
ACA1_048610	CDS	ACA1_048610	NW_004457252.1	163950	164138	R	encoded by transcript ACA1_048610A; uncharacterized protein	complement(163950..164138)	Acanthamoeba castellanii str. Neff	14911442
ACA1_048620	CDS	ACA1_048620	NW_004457252.1	164405	165211	R	encoded by transcript ACA1_048620A; uncharacterized protein	complement(join(164405..164554,164577..164639,164687..164774,164879..165003,165101..165211))	Acanthamoeba castellanii str. Neff	14911455
ACA1_048630	CDS	ACA1_048630	NW_004457252.1	165583	184029	D	encoded by transcript ACA1_048630A; HECTdomain (ubiquitin-transferase) domain containing protein	join(165583..166014,166199..166366,166573..166998,167118..167308,167400..167622,167813..168431,168559..168764,168973..169130,169304..169850,169981..170332,170560..170728,170819..171092,171252..171504,171620..171796,171967..172580,172815..172982,173175..173420,173555..173729,173846..174066,174173..174775,174872..175053,175330..175564,175684..175863,175984..176374,176503..176606,176791..176892,177085..177226,177374..177396,177472..177654,177849..177985,178150..178358,178470..178672,178848..179995,180152..180292,180362..180389,180610..180867,180973..181002,181287..181614,181778..181900,182236..182367,182568..182815,183016..183278,183393..183603,183754..184029)	Acanthamoeba castellanii str. Neff	14911483
ACA1_048640	CDS	ACA1_048640	NW_004457252.1	184124	187200	R	encoded by transcript ACA1_048640A; actin subfamily protein	complement(join(184124..184602,184689..184929,185120..185233,185344..185671,185847..185986,186102..186317,186471..186545,186680..186919,187069..187200))	Acanthamoeba castellanii str. Neff	14911462
ACA1_048650	CDS	ACA1_048650	NW_004457252.1	187793	190472	D	encoded by transcript ACA1_048650A; Hsp40, putative	join(187793..187916,188043..188167,188324..188396,188435..188541,188643..188750,188896..189036,189117..189332,189415..189516,189608..189707,189767..189913,190009..190111,190181..190472)	Acanthamoeba castellanii str. Neff	14911440
ACA1_298420	CDS	ACA1_298420	NW_004457251.1	1302	1775	D	encoded by transcript ACA1_298420A; uncharacterized protein	<1302..>1775	Acanthamoeba castellanii str. Neff	14911431
ACA1_298530	CDS	ACA1_298530	NW_004457251.1	9393	10103	R	encoded by transcript ACA1_298530A; uncharacterized protein	complement(join(9393..9761,9888..10103))	Acanthamoeba castellanii str. Neff	14911430
ACA1_317170	CDS	ACA1_317170	NW_004457250.1	126	4361	R	encoded by transcript ACA1_317170A; plasmamembrane proton-efflux P-type ATPase	complement(join(126..570,657..757,889..1020,1091..1276,1377..1535,1647..2428,2518..3051,3123..3404,3512..3606,3768..3862,4053..4361))	Acanthamoeba castellanii str. Neff	14911424
ACA1_317280	CDS	ACA1_317280	NW_004457250.1	8045	8452	D	encoded by transcript ACA1_317280A; DEAH (AspGlu-Ala-His) box polypeptide 16, putative	8045..8452	Acanthamoeba castellanii str. Neff	14911427
ACA1_317290	CDS	ACA1_317290	NW_004457250.1	8873	10646	D	encoded by transcript ACA1_317290A; uncharacterized protein	join(8873..9645,9726..9819,9892..9971,10063..10177,10276..10323,10422..10646)	Acanthamoeba castellanii str. Neff	14911425
ACA1_317300	CDS	ACA1_317300	NW_004457250.1	10713	11747	R	encoded by transcript ACA1_317300A; uncharacterized protein	complement(join(10713..10808,10926..11064,11152..11229,11330..11416,11530..11635,11720..11747))	Acanthamoeba castellanii str. Neff	14911428
ACA1_317410	CDS	ACA1_317410	NW_004457250.1	12989	13625	R	encoded by transcript ACA1_317410A; Ras guanine nucleotide exchange factor, putative	complement(join(<12989..13099,13219..13296,13416..>13625))	Acanthamoeba castellanii str. Neff	14911426
ACA1_317520	CDS	ACA1_317520	NW_004457250.1	13785	14740	D	encoded by transcript ACA1_317520A; cysteine protease atg4a, putative	join(<13785..13803,13893..14060,14180..14259,14347..14466,14585..14740)	Acanthamoeba castellanii str. Neff	14911422
ACA1_317530	CDS	ACA1_317530	NW_004457250.1	14951	15298	D	encoded by transcript ACA1_317530A; uncharacterized protein	14951..15298	Acanthamoeba castellanii str. Neff	14911423
ACA1_317540	CDS	ACA1_317540	NW_004457250.1	16970	18022	D	encoded by transcript ACA1_317540A; HPP family protein	join(16970..17010,17113..17311,17502..17547,17664..17774,17844..18022)	Acanthamoeba castellanii str. Neff	14911429
ACA1_317550	CDS	ACA1_317550	NW_004457250.1	18204	20336	R	encoded by transcript ACA1_317550A; uncharacterized protein	complement(join(18204..18311,18443..18521,18630..18757,19009..19050,19131..19238,19337..19417,19525..19574,19686..19860,19989..20057,20220..20336))	Acanthamoeba castellanii str. Neff	14911421
ACA1_353980	CDS	ACA1_353980	NW_004457249.1	55	527	R	encoded by transcript ACA1_353980A; uncharacterized protein	complement(join(55..168,301..450,507..527))	Acanthamoeba castellanii str. Neff	14911409
ACA1_354090	CDS	ACA1_354090	NW_004457249.1	1059	1979	R	encoded by transcript ACA1_354090A; uncharacterized protein	complement(join(1059..1287,1469..1686,1947..1979))	Acanthamoeba castellanii str. Neff	14911414
ACA1_354200	CDS	ACA1_354200	NW_004457249.1	2965	6605	R	encoded by transcript ACA1_354200A; CBS domain containing protein	complement(join(2965..3243,3347..3451,3521..3595,5924..6095,6195..6366,6458..6605))	Acanthamoeba castellanii str. Neff	14911410
ACA1_354310	CDS	ACA1_354310	NW_004457249.1	6967	7245	R	encoded by transcript ACA1_354310A; uncharacterized protein	complement(6967..7245)	Acanthamoeba castellanii str. Neff	14911415
ACA1_354320	CDS	ACA1_354320	NW_004457249.1	7455	8063	D	encoded by transcript ACA1_354320A; uncharacterized protein	7455..8063	Acanthamoeba castellanii str. Neff	14911420
ACA1_354330	CDS	ACA1_354330	NW_004457249.1	8125	8888	R	encoded by transcript ACA1_354330A; uncharacterized protein	complement(join(8125..8504,8681..8888))	Acanthamoeba castellanii str. Neff	14911419
ACA1_354340	CDS	ACA1_354340	NW_004457249.1	17178	17746	R	encoded by transcript ACA1_354340A; uncharacterized protein	complement(join(17178..17238,17323..17396,17606..17746))	Acanthamoeba castellanii str. Neff	14911411
ACA1_354350	CDS	ACA1_354350	NW_004457249.1	18401	19194	R	encoded by transcript ACA1_354350A; uncharacterized protein	complement(join(18401..18462,18537..18977,19014..19194))	Acanthamoeba castellanii str. Neff	14911418
ACA1_354360	CDS	ACA1_354360	NW_004457249.1	22394	22949	D	encoded by transcript ACA1_354360A; uncharacterized protein	join(22394..22753,22782..22949)	Acanthamoeba castellanii str. Neff	14911408
ACA1_354370	CDS	ACA1_354370	NW_004457249.1	23037	24849	R	encoded by transcript ACA1_354370A; nocturnin, putative	complement(join(23037..23795,23885..23920,24790..24849))	Acanthamoeba castellanii str. Neff	14911413
ACA1_354480	CDS	ACA1_354480	NW_004457249.1	25227	25619	R	encoded by transcript ACA1_354480A; glutathione transferase family protein	complement(join(25227..25235,25347..25619))	Acanthamoeba castellanii str. Neff	14911417
ACA1_354490	CDS	ACA1_354490	NW_004457249.1	25867	26227	R	encoded by transcript ACA1_354490A; uncharacterized protein	complement(join(25867..26003,26098..26227))	Acanthamoeba castellanii str. Neff	14911412
ACA1_354500	CDS	ACA1_354500	NW_004457249.1	26283	27866	D	encoded by transcript ACA1_354500A; Bromodomain containing protein	join(26283..26303,27024..27077,27181..27318,27475..27741,27819..>27866)	Acanthamoeba castellanii str. Neff	14911416
ACA1_008410	CDS	ACA1_008410	NW_004457248.1	12667	13067	R	encoded by transcript ACA1_008410A; uncharacterized protein	complement(join(12667..12849,12924..13067))	Acanthamoeba castellanii str. Neff	14911407
ACA1_102890	CDS	ACA1_102890	NW_004457247.1	87	266	R	encoded by transcript ACA1_102890A; uncharacterized protein	complement(87..266)	Acanthamoeba castellanii str. Neff	14911369
ACA1_102900	CDS	ACA1_102900	NW_004457247.1	512	916	D	encoded by transcript ACA1_102900A; uncharacterized protein	512..916	Acanthamoeba castellanii str. Neff	14911391
ACA1_102910	CDS	ACA1_102910	NW_004457247.1	1033	1338	R	encoded by transcript ACA1_102910A; uncharacterized protein	complement(1033..1338)	Acanthamoeba castellanii str. Neff	14911390
ACA1_103020	CDS	ACA1_103020	NW_004457247.1	1822	2336	R	encoded by transcript ACA1_103020A; uncharacterized protein	complement(<1822..2336)	Acanthamoeba castellanii str. Neff	14911388
ACA1_103140	CDS	ACA1_103140	NW_004457247.1	6571	7559	D	encoded by transcript ACA1_103140A; uncharacterized protein	join(6571..7071,7159..7293,7365..7559)	Acanthamoeba castellanii str. Neff	14911385
ACA1_103150	CDS	ACA1_103150	NW_004457247.1	7694	8334	D	encoded by transcript ACA1_103150A; uncharacterized protein	join(7694..7755,7853..7967,8041..8166,8251..8334)	Acanthamoeba castellanii str. Neff	14911405
ACA1_103160	CDS	ACA1_103160	NW_004457247.1	8844	10499	D	encoded by transcript ACA1_103160A; serine/threonine dehydratase	join(8844..8856,8931..9074,9613..9668,9739..9834,9914..10002,10094..10249,10340..10499)	Acanthamoeba castellanii str. Neff	14911384
ACA1_103170	CDS	ACA1_103170	NW_004457247.1	11030	13422	D	encoded by transcript ACA1_103170A; CBS domain containing protein	join(11030..11803,11883..11967,12071..12172,12260..12482,12614..12761,12835..12900,12989..13138,13155..13209,13281..13303,13345..13422)	Acanthamoeba castellanii str. Neff	14911404
ACA1_103180	CDS	ACA1_103180	NW_004457247.1	13874	14325	D	encoded by transcript ACA1_103180A; PH domain containing protein	join(13874..13966,14066..14176,14254..14325)	Acanthamoeba castellanii str. Neff	14911403
ACA1_103190	CDS	ACA1_103190	NW_004457247.1	15153	17668	R	encoded by transcript ACA1_103190A; zinc finger family protein	complement(join(15153..15203,15298..15465,15544..15616,15683..15752,15837..15906,16012..16127,16207..16374,16495..16588,16757..16896,16998..17105,17184..17287,17373..17497,17582..17668))	Acanthamoeba castellanii str. Neff	14911402
ACA1_103200	CDS	ACA1_103200	NW_004457247.1	18379	18812	R	encoded by transcript ACA1_103200A; proteintyrosine-phosphatase	complement(join(18379..18402,18456..18812))	Acanthamoeba castellanii str. Neff	14911401
ACA1_103210	CDS	ACA1_103210	NW_004457247.1	19149	19970	D	encoded by transcript ACA1_103210A; uncharacterized protein	join(19149..19355,19417..19566,19629..19970)	Acanthamoeba castellanii str. Neff	14911400
ACA1_103220	CDS	ACA1_103220	NW_004457247.1	20887	24805	D	encoded by transcript ACA1_103220A; RhoGAP domain containing protein	join(20887..21079,21221..21289,21442..21570,21638..21744,21823..21897,22023..22118,22205..22329,22408..22616,22637..22707,22802..23530,23593..24142,24233..24527,24607..24656,24747..24805)	Acanthamoeba castellanii str. Neff	14911368
ACA1_103330	CDS	ACA1_103330	NW_004457247.1	28409	28942	R	encoded by transcript ACA1_103330A; uncharacterized protein	complement(join(28409..28497,28583..28712,28799..28942))	Acanthamoeba castellanii str. Neff	14911406
ACA1_103340	CDS	ACA1_103340	NW_004457247.1	29276	30392	R	encoded by transcript ACA1_103340A; fascin subfamily protein	complement(join(29276..29534,29569..29972,30075..30244,30317..30392))	Acanthamoeba castellanii str. Neff	14911383
ACA1_103350	CDS	ACA1_103350	NW_004457247.1	30464	31593	R	encoded by transcript ACA1_103350A; uncharacterized protein	complement(join(30464..30972,31036..31122,31196..31280,31339..31593))	Acanthamoeba castellanii str. Neff	14911392
ACA1_103370	CDS	ACA1_103370	NW_004457247.1	35413	36268	D	encoded by transcript ACA1_103370A; MYND finger domain containing protein	join(35413..35503,35589..35749,35820..36037,36121..36268)	Acanthamoeba castellanii str. Neff	14911379
ACA1_103380	CDS	ACA1_103380	NW_004457247.1	37392	38971	D	encoded by transcript ACA1_103380A; RhoGEF domain containing protein	join(37392..37494,37563..37786,37861..37971,38030..38083,38292..38366,38425..38592,38665..38758,38832..38971)	Acanthamoeba castellanii str. Neff	14911393
ACA1_103590	CDS	ACA1_103590	NW_004457247.1	40848	41576	D	encoded by transcript ACA1_103590A; countin family protein	40848..41576	Acanthamoeba castellanii str. Neff	14911387
ACA1_103600	CDS	ACA1_103600	NW_004457247.1	41726	43252	D	encoded by transcript ACA1_103600A; BTB/POZ domain containing protein	join(41726..41816,41897..42360,42457..42540,42630..42750,42846..42873,42943..43003,43079..43252)	Acanthamoeba castellanii str. Neff	14911395
ACA1_103610	CDS	ACA1_103610	NW_004457247.1	43510	44433	R	encoded by transcript ACA1_103610A; OsmC family protein	complement(join(43510..43626,43693..43781,43862..43936,44010..44150,44209..44266,44344..44433))	Acanthamoeba castellanii str. Neff	14911375
ACA1_103620	CDS	ACA1_103620	NW_004457247.1	45287	46902	D	encoded by transcript ACA1_103620A; uncharacterized protein	join(45287..45887,45998..46082,46298..46374,46468..46682,46765..46902)	Acanthamoeba castellanii str. Neff	14911380
ACA1_103630	CDS	ACA1_103630	NW_004457247.1	47146	48912	D	encoded by transcript ACA1_103630A; peroxidase	join(47146..47179,47297..47466,47656..47733,47817..47949,48111..48280,48421..48498,48577..48912)	Acanthamoeba castellanii str. Neff	14911371
ACA1_103640	CDS	ACA1_103640	NW_004457247.1	50001	50987	D	encoded by transcript ACA1_103640A; peroxidase	join(50001..50049,50117..50286,50409..50486,50652..50987)	Acanthamoeba castellanii str. Neff	14911382
ACA1_103750	CDS	ACA1_103750	NW_004457247.1	52189	52684	D	encoded by transcript ACA1_103750A; PPOD2 peroxidase	join(52189..52237,52309..52478,52607..>52684)	Acanthamoeba castellanii str. Neff	14911381
ACA1_103860	CDS	ACA1_103860	NW_004457247.1	53506	55361	R	encoded by transcript ACA1_103860A; phorbol esters/diacylglycerol binding domain (c1 domain) domain containing protein	complement(join(53506..53652,53712..53789,53857..53957,54017..54119,54194..54297,54381..54461,54527..54575,54667..54715,54845..54945,55012..55315,55330..55361))	Acanthamoeba castellanii str. Neff	14911374
ACA1_103870	CDS	ACA1_103870	NW_004457247.1	55481	58983	R	encoded by transcript ACA1_103870A; villin headpiece domain containing protein	complement(join(55481..55594,55683..55773,55843..57434,57514..58040,58115..58493,58582..58660,58719..58817,58910..58983))	Acanthamoeba castellanii str. Neff	14911378
ACA1_103880	CDS	ACA1_103880	NW_004457247.1	59216	60605	R	encoded by transcript ACA1_103880A; uncharacterized protein	complement(join(59216..59225,59246..59325,59422..59440,59537..59709,59788..59925,59993..60156,60277..60358,60492..60605))	Acanthamoeba castellanii str. Neff	14911377
ACA1_103990	CDS	ACA1_103990	NW_004457247.1	63053	64276	R	encoded by transcript ACA1_103990A; GTPase activating protein Sar1, putative	complement(join(<63053..63130,63202..63287,63376..63530,63611..63729,63823..63965,64054..64150,64235..64276))	Acanthamoeba castellanii str. Neff	14911399
ACA1_104000	CDS	ACA1_104000	NW_004457247.1	65022	66594	R	encoded by transcript ACA1_104000A; uncharacterized protein	complement(join(65022..65257,65331..65384,65460..65859,65994..66262,66573..66594))	Acanthamoeba castellanii str. Neff	14911376
ACA1_104010	CDS	ACA1_104010	NW_004457247.1	67041	68097	D	encoded by transcript ACA1_104010A; uncharacterized protein	join(67041..67092,67319..67365,67408..68097)	Acanthamoeba castellanii str. Neff	14911398
ACA1_104230	CDS	ACA1_104230	NW_004457247.1	72406	72786	R	encoded by transcript ACA1_104230A; GTP cyclohydrolase, putative	complement(<72406..72786)	Acanthamoeba castellanii str. Neff	14911394
ACA1_104240	CDS	ACA1_104240	NW_004457247.1	73163	74577	R	encoded by transcript ACA1_104240A; uncharacterized protein	complement(join(73163..73240,73277..73450,73588..73716,73873..73974,74053..74169,74210..74444,74525..74577))	Acanthamoeba castellanii str. Neff	14911397
ACA1_104250	CDS	ACA1_104250	NW_004457247.1	74704	75189	D	encoded by transcript ACA1_104250A; uncharacterized protein	join(<74704..74974,75072..>75189)	Acanthamoeba castellanii str. Neff	14911373
ACA1_104360	CDS	ACA1_104360	NW_004457247.1	75602	78190	D	encoded by transcript ACA1_104360A; BTB/POZ domain containing protein	join(75602..75651,75911..76050,76131..76283,76356..76505,76576..76725,76793..76949,77015..77192,77272..77643,77707..77802,77886..78039,78108..>78190)	Acanthamoeba castellanii str. Neff	14911372
ACA1_104570	CDS	ACA1_104570	NW_004457247.1	79622	80949	D	encoded by transcript ACA1_104570A; chromatin assembly factor 1, putative	join(79622..79858,79924..79985,80054..80134,80223..80336,80401..80517,80614..80724,80808..80949)	Acanthamoeba castellanii str. Neff	14911370
ACA1_337740	CDS	ACA1_337740	NW_004457246.1	102	1317	R	encoded by transcript ACA1_337740A; uncharacterized protein	complement(join(102..223,294..362,471..514,598..1145,1219..1317))	Acanthamoeba castellanii str. Neff	14911354
ACA1_337850	CDS	ACA1_337850	NW_004457246.1	7576	11633	R	encoded by transcript ACA1_337850A; GTPaseactivator protein for Ras-like GTPase	complement(join(7576..7721,7856..7922,8018..8400,8518..8764,8839..8931,8991..9240,9311..9504,9570..9914,10017..10267,10319..10504,10517..10658,10749..10921,11113..11205,11400..11444,11546..11633))	Acanthamoeba castellanii str. Neff	14911355
ACA1_337960	CDS	ACA1_337960	NW_004457246.1	11805	13637	R	encoded by transcript ACA1_337960A; uncharacterized protein	complement(11805..13637)	Acanthamoeba castellanii str. Neff	14911356
ACA1_337970	CDS	ACA1_337970	NW_004457246.1	13976	15450	R	encoded by transcript ACA1_337970A; jumonji domain containing 5, putative	complement(join(13976..14140,14259..14378,14483..14617,14678..14896,14978..15039,15123..15450))	Acanthamoeba castellanii str. Neff	14911357
ACA1_337980	CDS	ACA1_337980	NW_004457246.1	19083	21746	D	encoded by transcript ACA1_337980A; pentatricopeptide repeat domain containing protein	join(19083..19143,19646..20073,20219..20268,20281..20836,20893..20928,21045..21746)	Acanthamoeba castellanii str. Neff	14911358
ACA1_337990	CDS	ACA1_337990	NW_004457246.1	21879	22701	R	encoded by transcript ACA1_337990A; intracellular protease, PfpI family protein	complement(join(21879..22006,22083..22182,22279..22326,22353..22385,22525..22701))	Acanthamoeba castellanii str. Neff	14911359
ACA1_338000	CDS	ACA1_338000	NW_004457246.1	23009	23539	R	encoded by transcript ACA1_338000A; uncharacterized protein	complement(join(23009..23179,23328..23377,23440..23539))	Acanthamoeba castellanii str. Neff	14911360
ACA1_338010	CDS	ACA1_338010	NW_004457246.1	23838	24506	D	encoded by transcript ACA1_338010A; raslike protein	join(23838..23926,23953..24039,24110..24506)	Acanthamoeba castellanii str. Neff	14911361
ACA1_338020	CDS	ACA1_338020	NW_004457246.1	24765	25418	D	encoded by transcript ACA1_338020A; RAS protein	join(24765..24967,25040..25418)	Acanthamoeba castellanii str. Neff	14911362
ACA1_338030	CDS	ACA1_338030	NW_004457246.1	25076	29099	R	encoded by transcript ACA1_338030A; NHL repeat containing 2 isoform 3, putative	complement(join(25076..25408,25474..25826,25882..26163,26248..26328,26430..26645,26723..26851,26923..27015,27120..27260,27329..27415,27482..27568,27662..27777,27841..28236,28344..28546,28683..28763,28847..28978,29025..29099))	Acanthamoeba castellanii str. Neff	14911363
ACA1_338040	CDS	ACA1_338040	NW_004457246.1	29454	34086	D	encoded by transcript ACA1_338040A; uncharacterized protein	join(29454..29583,29708..30128,30255..30402,30531..30688,30831..30927,31042..31312,31358..31410,31449..31520,31674..32064,32183..32526,32619..32745,32840..32969,33079..33254,33332..34086)	Acanthamoeba castellanii str. Neff	14911364
ACA1_338050	CDS	ACA1_338050	NW_004457246.1	34150	40528	R	encoded by transcript ACA1_338050A; ABC2 type transporter superfamily protein	complement(join(34150..34347,34447..34777,34855..34993,35069..35552,35677..35804,35885..36035,36122..36319,36411..36608,36705..36955,37035..37177,37300..37400,37449..37533,37614..37663,37759..37818,37952..38077,38155..38325,38429..38564,38654..39011,39034..39184,39372..39592,39686..39835,39925..40249,40484..40528))	Acanthamoeba castellanii str. Neff	14911365
ACA1_338060	CDS	ACA1_338060	NW_004457246.1	41098	43745	R	encoded by transcript ACA1_338060A; cytochrome p450 superfamily protein	complement(join(41098..41209,41297..41364,41434..41550,41666..41809,41867..42032,42133..42251,42326..42425,42494..42565,42652..42740,42830..42944,43031..43143,43222..43330,43395..43531,43662..43745))	Acanthamoeba castellanii str. Neff	14911366
ACA1_338070	CDS	ACA1_338070	NW_004457246.1	44033	46104	R	encoded by transcript ACA1_338070A; uncharacterized protein	complement(join(44033..45022,45122..45216,45310..45795,45885..45967,46049..46104))	Acanthamoeba castellanii str. Neff	14911367
ACA1_338180	CDS	ACA1_338180	NW_004457246.1	48446	49492	R	encoded by transcript ACA1_338180A; uncharacterized protein	complement(join(48446..48884,48942..49039,49123..49192,49317..49492))	Acanthamoeba castellanii str. Neff	14911352
ACA1_338290	CDS	ACA1_338290	NW_004457246.1	52217	54977	R	encoded by transcript ACA1_338290A; uncharacterized protein	complement(join(52217..52417,52494..52939,53042..53188,53299..53577,53614..53743,53829..53953,54040..54168,54246..54412,54451..54613,54719..>54977))	Acanthamoeba castellanii str. Neff	14911353
ACA1_144560	CDS	ACA1_144560	NW_004457245.1	154	738	D	encoded by transcript ACA1_144560A; uncharacterized protein	154..738	Acanthamoeba castellanii str. Neff	14911290
ACA1_144570	CDS	ACA1_144570	NW_004457245.1	1127	3104	D	encoded by transcript ACA1_144570A; X7, putative	join(1127..1207,2479..2586,2692..2837,2921..3104)	Acanthamoeba castellanii str. Neff	14911331
ACA1_144680	CDS	ACA1_144680	NW_004457245.1	3153	3773	R	encoded by transcript ACA1_144680A; uncharacterized protein	complement(join(3153..3373,3647..3773))	Acanthamoeba castellanii str. Neff	14911327
ACA1_144690	CDS	ACA1_144690	NW_004457245.1	4036	4580	D	encoded by transcript ACA1_144690A; dihydroflavonol 4reductase	join(4036..4069,4154..4366,4507..>4580)	Acanthamoeba castellanii str. Neff	14911326
ACA1_144800	CDS	ACA1_144800	NW_004457245.1	4831	5495	D	encoded by transcript ACA1_144800A; cinnamoylCoA reductase	join(<4831..5084,5166..5304,5388..5495)	Acanthamoeba castellanii str. Neff	14911329
ACA1_144810	CDS	ACA1_144810	NW_004457245.1	5560	12078	R	encoded by transcript ACA1_144810A; putative DNA helicase	complement(join(5560..8341,8437..8578,8657..8823,8906..9143,9328..9450,9591..9677,9764..9843,9937..10225,10344..10479,10565..10656,10762..10858,10957..11082,11231..11390,11518..11588,11698..12078))	Acanthamoeba castellanii str. Neff	14911323
ACA1_144820	CDS	ACA1_144820	NW_004457245.1	12582	15933	R	encoded by transcript ACA1_144820A; Ankyrin repeatcontaining protein	complement(join(12582..12907,13016..13151,13245..13337,13451..13620,13727..13826,13901..13984,14101..14337,14423..14559,14659..14812,14924..15341,15436..15526,15654..15933))	Acanthamoeba castellanii str. Neff	14911322
ACA1_144830	CDS	ACA1_144830	NW_004457245.1	16019	22335	R	encoded by transcript ACA1_144830A; C2 domain containing protein	complement(join(16019..16139,16204..16326,16428..16572,16691..17117,17213..17350,17467..17511,17601..17687,17794..17880,17964..18104,18216..18401,18469..18538,18691..18806,18922..19344,19499..19536,19608..19755,19829..19915,20028..20135,20242..20288,20360..20596,20711..20822,21017..21198,21269..21392,21500..21731,21866..21938,22077..22335))	Acanthamoeba castellanii str. Neff	14911303
ACA1_144840	CDS	ACA1_144840	NW_004457245.1	22822	23760	D	encoded by transcript ACA1_144840A; glutathione Stransferase, C-terminal domain containing protein	join(22822..22980,23140..23436,23536..23760)	Acanthamoeba castellanii str. Neff	14911298
ACA1_144850	CDS	ACA1_144850	NW_004457245.1	23822	24652	R	encoded by transcript ACA1_144850A; rhodaneselike domain containing protein	complement(join(23822..23952,24074..24151,24225..24294,24365..24507,24592..24652))	Acanthamoeba castellanii str. Neff	14911320
ACA1_144860	CDS	ACA1_144860	NW_004457245.1	26366	30192	D	encoded by transcript ACA1_144860A; PH domain containing protein	join(26366..26616,26871..27110,27293..27382,27483..27645,27723..28343,28371..29105,29242..29433,29502..29602,29694..30192)	Acanthamoeba castellanii str. Neff	14911351
ACA1_144870	CDS	ACA1_144870	NW_004457245.1	30451	31086	D	encoded by transcript ACA1_144870A; phospholipase D/transphosphatidylase	join(30451..30668,30682..30870,30891..31086)	Acanthamoeba castellanii str. Neff	14911317
ACA1_144880	CDS	ACA1_144880	NW_004457245.1	31175	33577	R	encoded by transcript ACA1_144880A; uncharacterized protein	complement(join(31175..31250,31335..31420,31539..31637,31754..31875,31987..32163,32242..32307,32412..32540,32682..32797,32890..33017,33110..33288,33532..33577))	Acanthamoeba castellanii str. Neff	14911316
ACA1_144890	CDS	ACA1_144890	NW_004457245.1	34230	34694	R	encoded by transcript ACA1_144890A; phosphoenolpyruvate phosphomutase	complement(join(34230..34401,34474..34694))	Acanthamoeba castellanii str. Neff	14911350
ACA1_144900	CDS	ACA1_144900	NW_004457245.1	34970	35941	R	encoded by transcript ACA1_144900A; phosphoenolpyruvate phosphomutase	complement(join(34970..34998,35145..35403,35501..35683,35804..35941))	Acanthamoeba castellanii str. Neff	14911314
ACA1_144910	CDS	ACA1_144910	NW_004457245.1	36283	38614	D	encoded by transcript ACA1_144910A; Synapsin, ATP binding domain containing protein	join(36283..36360,36458..36640,36746..36879,37031..37146,37228..37296,37377..37396,37508..37624,37718..37770,37870..37935,37990..38039,38199..38614)	Acanthamoeba castellanii str. Neff	14911285
ACA1_144920	CDS	ACA1_144920	NW_004457245.1	38758	41568	R	encoded by transcript ACA1_144920A; IgA Peptidase M64 protein	complement(join(38758..39102,39208..39308,39401..39414,39486..39702,39794..39945,40021..40159,40255..40394,40478..40584,40675..40845,40942..41203,41303..41568))	Acanthamoeba castellanii str. Neff	14911324
ACA1_144930	CDS	ACA1_144930	NW_004457245.1	41720	42258	R	encoded by transcript ACA1_144930A; acetyltransferase	complement(join(41720..41854,41981..42093,42165..42258))	Acanthamoeba castellanii str. Neff	14911311
ACA1_144940	CDS	ACA1_144940	NW_004457245.1	42502	44867	R	encoded by transcript ACA1_144940A; ATPase/histidine kinase/DNA gyrase B/HSP90 domain containing protein	complement(join(42502..43235,43288..43438,43522..44015,44277..44468,44564..44867))	Acanthamoeba castellanii str. Neff	14911308
ACA1_144950	CDS	ACA1_144950	NW_004457245.1	46367	46849	R	encoded by transcript ACA1_144950A; uncharacterized protein	complement(46367..46849)	Acanthamoeba castellanii str. Neff	14911309
ACA1_145060	CDS	ACA1_145060	NW_004457245.1	47645	48831	D	encoded by transcript ACA1_145060A; actin subfamily protein	join(47645..48115,48675..48764,48796..48831)	Acanthamoeba castellanii str. Neff	14911348
ACA1_145170	CDS	ACA1_145170	NW_004457245.1	49774	53211	D	encoded by transcript ACA1_145170A; carrier superfamily protein	join(49774..49880,50000..50241,50353..50472,50588..50685,50789..50888,51013..51138,51263..51418,51684..51858,52136..52287,52370..52581,52681..52939,53063..53211)	Acanthamoeba castellanii str. Neff	14911307
ACA1_145180	CDS	ACA1_145180	NW_004457245.1	53270	54671	R	encoded by transcript ACA1_145180A; uncharacterized protein	complement(join(53270..53470,53558..53681,53751..53858,53922..54054,54134..54356,54468..54542,54615..54671))	Acanthamoeba castellanii str. Neff	14911297
ACA1_145190	CDS	ACA1_145190	NW_004457245.1	54691	56643	R	encoded by transcript ACA1_145190A; RNA 3'-terminal phosphate cyclase	complement(join(54691..54882,54942..55052,55121..55210,55263..55396,55464..55547,55615..55718,55792..55912,56013..56074,56152..56237,56305..56643))	Acanthamoeba castellanii str. Neff	14911346
ACA1_145200	CDS	ACA1_145200	NW_004457245.1	56852	57310	R	encoded by transcript ACA1_145200A; uncharacterized protein	complement(56852..57310)	Acanthamoeba castellanii str. Neff	14911305
ACA1_145210	CDS	ACA1_145210	NW_004457245.1	57601	60520	R	encoded by transcript ACA1_145210A; ABC transporter, ATPbinding domain containing protein	complement(join(57601..57684,57747..58056,58241..58373,58450..58536,58600..58953,59125..59461,59629..59919,59987..60520))	Acanthamoeba castellanii str. Neff	14911302
ACA1_145220	CDS	ACA1_145220	NW_004457245.1	61417	62074	R	encoded by transcript ACA1_145220A; prefoldin subunit 2, putative	complement(join(61417..61584,61717..61840,61959..62074))	Acanthamoeba castellanii str. Neff	14911301
ACA1_145230	CDS	ACA1_145230	NW_004457245.1	62233	67784	D	encoded by transcript ACA1_145230A; kinesin motor domain containing protein	join(62233..62436,62565..62627,62734..62771,62864..62992,63153..63300,63442..63545,63640..63719,63816..63976,64110..64210,64322..64405,64496..64595,64734..65021,65118..65288,65364..65423,65534..66659,66725..66783,66850..67164,67273..67320,67412..67533,67631..67784)	Acanthamoeba castellanii str. Neff	14911296
ACA1_145240	CDS	ACA1_145240	NW_004457245.1	67937	75638	R	encoded by transcript ACA1_145240A; phosphate ABC transporter, phosphate-binding protein PstS protein	complement(join(67937..68150,68232..68319,68424..68729,68827..68995,69087..69325,69522..70555,70702..71041,71160..71301,71399..71658,71796..71868,71959..72142,72219..72591,72733..72793,72854..73020,73111..73287,73383..73462,73534..73697,73807..73937,74069..74134,74210..74333,74402..74548,74628..74792,74879..74934,75010..75117,75328..75477,75605..75638))	Acanthamoeba castellanii str. Neff	14911349
ACA1_145250	CDS	ACA1_145250	NW_004457245.1	76248	77669	R	encoded by transcript ACA1_145250A; uncharacterized protein	complement(join(76248..76304,76382..76419,76521..76691,76763..76853,76960..77112,77186..77280,77389..77483,77572..77669))	Acanthamoeba castellanii str. Neff	14911284
ACA1_145260	CDS	ACA1_145260	NW_004457245.1	77830	80067	R	encoded by transcript ACA1_145260A; DnaJ domain containing protein	complement(join(77830..78885,78992..79361,79490..80067))	Acanthamoeba castellanii str. Neff	14911342
ACA1_145270	CDS	ACA1_145270	NW_004457245.1	80242	84928	D	encoded by transcript ACA1_145270A; 7fold repeat in clathrin and VPS proteins repeat-containing protein	join(80242..80412,80662..80803,81008..81166,81275..81373,81461..81600,81704..81809,81874..82024,82124..82223,82314..82443,82538..82674,82792..82914,83313..83414,83510..83585,83675..83811,83871..84041,84140..84280,84382..84661,84741..84928)	Acanthamoeba castellanii str. Neff	14911336
ACA1_145280	CDS	ACA1_145280	NW_004457245.1	85077	87501	D	encoded by transcript ACA1_145280A; uncharacterized protein	join(85077..85166,85257..85346,85470..85553,85653..85790,85887..86652,86723..87501)	Acanthamoeba castellanii str. Neff	14911321
ACA1_145290	CDS	ACA1_145290	NW_004457245.1	87890	90601	D	encoded by transcript ACA1_145290A; ATPase/histidine kinase/DNA gyrase B/HSP90 domain containing protein	join(87890..88865,88962..89206,89298..89494,89509..89915,89983..90218,90293..90444,90529..90601)	Acanthamoeba castellanii str. Neff	14911315
ACA1_145300	CDS	ACA1_145300	NW_004457245.1	91029	93676	D	encoded by transcript ACA1_145300A; carrier superfamily protein	join(91029..91136,91215..91410,91490..91576,92041..92127,92227..92327,92465..92575,92716..92954,93039..93147,93512..93676)	Acanthamoeba castellanii str. Neff	14911293
ACA1_145410	CDS	ACA1_145410	NW_004457245.1	93790	95605	R	encoded by transcript ACA1_145410A; C-terminal-binding protein family protein	complement(join(93790..93953,94040..94121,94228..94361,94484..94567,94705..94754,94862..95069,95165..95245,95334..95403,95495..95605))	Acanthamoeba castellanii str. Neff	14911292
ACA1_145520	CDS	ACA1_145520	NW_004457245.1	96551	96763	R	encoded by transcript ACA1_145520A; uncharacterized protein	complement(96551..96763)	Acanthamoeba castellanii str. Neff	14911288
ACA1_145530	CDS	ACA1_145530	NW_004457245.1	96911	97624	R	encoded by transcript ACA1_145530A; uncharacterized protein	complement(join(96911..97262,97359..97624))	Acanthamoeba castellanii str. Neff	14911300
ACA1_145550	CDS	ACA1_145550	NW_004457245.1	104414	104919	R	encoded by transcript ACA1_145550A; uncharacterized protein	complement(join(104414..104601,104865..104919))	Acanthamoeba castellanii str. Neff	14911334
ACA1_145560	CDS	ACA1_145560	NW_004457245.1	106332	109263	R	encoded by transcript ACA1_145560A; UBA/TS-N domain containing protein	complement(join(106332..106424,106536..106645,106754..106852,106999..107093,107193..107432,107492..107785,107879..108362,108466..108662,108720..108810,108995..109081,109203..109263))	Acanthamoeba castellanii str. Neff	14911332
ACA1_145570	CDS	ACA1_145570	NW_004457245.1	109298	113662	R	encoded by transcript ACA1_145570A; uncharacterized protein	complement(join(109298..109407,109763..109852,109980..110127,110248..110412,110534..110591,110675..110760,110875..111057,111171..111322,111413..111565,111691..111739,111910..112041,112053..112298,112422..112547,112686..112767,112906..112998,113159..113230,113317..113399,113476..113546,113617..113662))	Acanthamoeba castellanii str. Neff	14911325
ACA1_145580	CDS	ACA1_145580	NW_004457245.1	113979	115654	R	encoded by transcript ACA1_145580A; extracellular response kinase, putative	complement(join(113979..114182,114310..114409,114485..114691,114773..114939,115017..115144,115235..115386,115416..115525,115589..115654))	Acanthamoeba castellanii str. Neff	14911347
ACA1_145600	CDS	ACA1_145600	NW_004457245.1	121351	125625	R	encoded by transcript ACA1_145600A; leucine rich repeat domain containing protein	complement(join(121351..121391,121473..121710,121810..121917,122040..122117,122217..122386,122477..122575,122692..122839,122974..123341,123421..123594,123672..123791,123896..124314,124427..124476,124576..124675,124753..124959,125041..125207,125293..125420,125505..125625))	Acanthamoeba castellanii str. Neff	14911333
ACA1_145710	CDS	ACA1_145710	NW_004457245.1	126136	128739	R	encoded by transcript ACA1_145710A; lipase	complement(126136..128739)	Acanthamoeba castellanii str. Neff	14911328
ACA1_145720	CDS	ACA1_145720	NW_004457245.1	129053	133037	R	encoded by transcript ACA1_145720A; SAM domain (Sterile alpha motif) domain containing protein	complement(join(129053..129093,129201..129438,129547..129654,129763..129840,129940..130109,130171..130284,130386..130533,130668..131035,131132..131305,131373..131492,131568..132135,132215..133020,133031..133037))	Acanthamoeba castellanii str. Neff	14911312
ACA1_145730	CDS	ACA1_145730	NW_004457245.1	133802	134790	R	encoded by transcript ACA1_145730A; uncharacterized protein	complement(join(133802..134224,134346..134573,134671..134790))	Acanthamoeba castellanii str. Neff	14911283
ACA1_145740	CDS	ACA1_145740	NW_004457245.1	135410	137288	D	encoded by transcript ACA1_145740A; CBS domain containing protein	join(135410..135574,135641..135709,135796..135849,135976..136267,136371..136490,136621..136844,136932..137045,137118..137288)	Acanthamoeba castellanii str. Neff	14911282
ACA1_145750	CDS	ACA1_145750	NW_004457245.1	137423	139896	R	encoded by transcript ACA1_145750A; Kazaltype serine protease inhibitor domain containing protein	complement(join(137423..137563,137632..137865,138026..138247,138330..138406,138536..138603,138776..138848,138934..139045,139125..139228,139363..139504,139690..139896))	Acanthamoeba castellanii str. Neff	14911318
ACA1_145760	CDS	ACA1_145760	NW_004457245.1	140462	144234	R	encoded by transcript ACA1_145760A; Legumelike lectin family protein	complement(join(140462..140530,140621..140722,140864..141121,141176..141289,141407..141514,141764..141939,142062..142185,142369..142554,142693..142804,143424..143511,143613..143744,143844..144234))	Acanthamoeba castellanii str. Neff	14911344
ACA1_145770	CDS	ACA1_145770	NW_004457245.1	144333	144771	D	encoded by transcript ACA1_145770A; uncharacterized protein	join(144333..144341,144595..144771)	Acanthamoeba castellanii str. Neff	14911343
ACA1_145780	CDS	ACA1_145780	NW_004457245.1	144919	146726	D	encoded by transcript ACA1_145780A; adenosine deaminase	join(144919..145008,145090..145228,145367..145519,145665..145785,145847..145952,146201..146368,146523..146726)	Acanthamoeba castellanii str. Neff	14911310
ACA1_145790	CDS	ACA1_145790	NW_004457245.1	147004	149094	D	encoded by transcript ACA1_145790A; uncharacterized protein	join(147004..147088,147258..147440,147550..147713,147806..147976,148115..148294,148394..148519,148646..148731,148823..148964,149056..149094)	Acanthamoeba castellanii str. Neff	14911345
ACA1_145810	CDS	ACA1_145810	NW_004457245.1	156154	158029	R	encoded by transcript ACA1_145810A; uncharacterized protein	complement(join(156154..156232,156310..156527,156615..156812,156989..157096,157218..157696,157765..157894,157994..158029))	Acanthamoeba castellanii str. Neff	14911294
ACA1_145820	CDS	ACA1_145820	NW_004457245.1	158272	162532	R	encoded by transcript ACA1_145820A; ubiquitinactivating enzyme E1 1, putative	complement(join(158272..158419,158503..158699,158776..158921,158989..159297,159366..159561,159648..159926,160010..160275,160360..160450,160536..160907,160973..161074,161166..161476,161547..161679,161762..162055,162099..162259,162382..162532))	Acanthamoeba castellanii str. Neff	14911291
ACA1_145830	CDS	ACA1_145830	NW_004457245.1	164640	165728	D	encoded by transcript ACA1_145830A; uncharacterized protein	164640..165728	Acanthamoeba castellanii str. Neff	14911335
ACA1_145840	CDS	ACA1_145840	NW_004457245.1	166877	167267	R	encoded by transcript ACA1_145840A; uncharacterized protein	complement(join(166877..166972,167049..167267))	Acanthamoeba castellanii str. Neff	14911295
ACA1_145850	CDS	ACA1_145850	NW_004457245.1	167367	169036	R	encoded by transcript ACA1_145850A; O-methyltransferase, putative	complement(join(167367..167677,167764..167925,168008..168067,168143..168469,168548..168655,168729..168824,168901..169036))	Acanthamoeba castellanii str. Neff	14911313
ACA1_145880	CDS	ACA1_145880	NW_004457245.1	173039	175665	D	encoded by transcript ACA1_145880A; uncharacterized protein	join(173039..173204,173315..173413,173498..173600,173673..173732,173849..173908,173997..174103,174286..174554,174694..174795,174870..174969,175081..175223,175327..175665)	Acanthamoeba castellanii str. Neff	14911341
ACA1_145900	CDS	ACA1_145900	NW_004457245.1	180397	184565	D	encoded by transcript ACA1_145900A; uncharacterized protein	join(180397..180451,180547..180717,180794..181601,181731..181887,181974..182311,182411..182562,182633..183079,183171..183279,183361..184177,184250..184403,184468..184565)	Acanthamoeba castellanii str. Neff	14911339
ACA1_145910	CDS	ACA1_145910	NW_004457245.1	185147	187356	D	encoded by transcript ACA1_145910A; Ankyrin repeatcontaining protein	join(185147..185543,185747..186276,186561..186632,186722..186848,186927..187017,187101..187356)	Acanthamoeba castellanii str. Neff	14911338
ACA1_145920	CDS	ACA1_145920	NW_004457245.1	187513	190736	R	encoded by transcript ACA1_145920A; protein kinase domain containing protein	complement(join(187513..187632,187738..187839,187968..188141,188288..188377,188458..188538,188623..188726,188881..188944,189056..189103,189127..189338,189445..189949,190072..190199,190335..190452,190602..190736))	Acanthamoeba castellanii str. Neff	14911337
ACA1_145940	CDS	ACA1_145940	NW_004457245.1	197526	201341	D	encoded by transcript ACA1_145940A; ribonuclease HI, putative	197526..201341	Acanthamoeba castellanii str. Neff	14911289
ACA1_179820	CDS	ACA1_179820	NW_004457244.1	85	616	D	encoded by transcript ACA1_179820A; uncharacterized protein	join(<85..159,277..325,414..616)	Acanthamoeba castellanii str. Neff	14911269
ACA1_179830	CDS	ACA1_179830	NW_004457244.1	713	1128	D	encoded by transcript ACA1_179830A; uncharacterized protein	join(713..1041,1098..1128)	Acanthamoeba castellanii str. Neff	14911268
ACA1_179940	CDS	ACA1_179940	NW_004457244.1	2793	3299	D	encoded by transcript ACA1_179940A; uncharacterized protein	2793..3299	Acanthamoeba castellanii str. Neff	14911279
ACA1_179950	CDS	ACA1_179950	NW_004457244.1	3809	4111	R	encoded by transcript ACA1_179950A; uncharacterized protein	complement(3809..4111)	Acanthamoeba castellanii str. Neff	14911275
ACA1_179960	CDS	ACA1_179960	NW_004457244.1	7953	10590	R	encoded by transcript ACA1_179960A; protein kinase domain/MORN repeatcontaining protein	complement(join(7953..8037,8185..8281,8381..8732,8813..9110,9202..9345,9494..9775,9951..10143,10386..10590))	Acanthamoeba castellanii str. Neff	14911274
ACA1_179970	CDS	ACA1_179970	NW_004457244.1	10875	12978	D	encoded by transcript ACA1_179970A; uncharacterized protein	join(10875..11109,11307..11482,11671..11779,11913..11975,12150..12240,12339..12494,12616..12721,12922..12978)	Acanthamoeba castellanii str. Neff	14911278
ACA1_179980	CDS	ACA1_179980	NW_004457244.1	13140	13664	R	encoded by transcript ACA1_179980A; mitochondrial ribosomal protein L51/S25/CIB8 family protein	complement(join(13140..13318,13411..13517,13585..13664))	Acanthamoeba castellanii str. Neff	14911273
ACA1_179990	CDS	ACA1_179990	NW_004457244.1	14179	14738	D	encoded by transcript ACA1_179990A; uncharacterized protein	join(14179..14609,14654..14738)	Acanthamoeba castellanii str. Neff	14911272
ACA1_180000	CDS	ACA1_180000	NW_004457244.1	15001	16866	D	encoded by transcript ACA1_180000A; C5 cytosine-specific DNA methylase superfamily protein	join(15001..15050,15123..15249,15346..15418,15560..15648,15755..15901,15972..16233,16313..16419,16519..16580,16683..16866)	Acanthamoeba castellanii str. Neff	14911277
ACA1_180010	CDS	ACA1_180010	NW_004457244.1	17051	18114	R	encoded by transcript ACA1_180010A; uncharacterized protein	complement(join(17051..17416,17602..18114))	Acanthamoeba castellanii str. Neff	14911271
ACA1_180020	CDS	ACA1_180020	NW_004457244.1	18616	24609	D	encoded by transcript ACA1_180020A; uncharacterized protein	join(18616..18636,18952..19074,19293..19479,19494..19849,19932..20009,20130..20139,21531..21634,21729..21849,22035..22100,22220..22242,22452..22607,22817..22918,23115..23886,24059..24609)	Acanthamoeba castellanii str. Neff	14911270
ACA1_180140	CDS	ACA1_180140	NW_004457244.1	28224	29557	D	encoded by transcript ACA1_180140A; protein sym1, putative	join(28224..28352,28506..28610,28822..28926,29068..29141,29292..29363,29470..29557)	Acanthamoeba castellanii str. Neff	14911267
ACA1_180150	CDS	ACA1_180150	NW_004457244.1	29740	33301	R	encoded by transcript ACA1_180150A; Ser/Thr protein kinase	complement(join(29740..29901,30029..30196,30415..30494,30548..30598,30634..30723,30876..31007,31094..31172,31290..31439,31606..31687,31846..32025,32237..32309,32474..32564,32635..32787,32928..33020,33092..33301))	Acanthamoeba castellanii str. Neff	14911266
ACA1_180160	CDS	ACA1_180160	NW_004457244.1	33550	35723	D	encoded by transcript ACA1_180160A; uncharacterized protein	join(33550..34189,34430..34572,34704..34838,35014..35557,35671..35723)	Acanthamoeba castellanii str. Neff	14911265
ACA1_180170	CDS	ACA1_180170	NW_004457244.1	36170	36892	D	encoded by transcript ACA1_180170A; RNA-binding domain-containing protein	36170..36892	Acanthamoeba castellanii str. Neff	14911264
ACA1_180380	CDS	ACA1_180380	NW_004457244.1	41551	51005	R	encoded by transcript ACA1_180380A; FAT domain containing protein	complement(join(41551..41649,41716..41859,42036..42076,42189..42366,42501..42662,42806..43186,43454..43621,43755..43931,44191..45306,45455..45689,45870..46072,46198..46414,46623..46765,46980..47105,47324..47503,47686..47859,48036..48239,48553..48619,48929..49167,49331..49777,49877..49938,50054..50409,50565..50887,50982..51005))	Acanthamoeba castellanii str. Neff	14911263
ACA1_180590	CDS	ACA1_180590	NW_004457244.1	51900	62007	R	encoded by transcript ACA1_180590A; TRRAP family protein	complement(join(<51900..52141,52377..52570,52681..52723,52742..52837,52981..53098,53163..53493,53637..53846,53937..54068,54184..54382,54546..54606,54721..54867,54977..55172,55423..55763,55851..56034,56172..56276,56397..56519,56726..56923,56973..57101,57201..57372,57476..57555,57696..57974,58081..58299,58408..58680,58796..58955,59065..59267,59388..59638,59798..59971,60154..60359,60511..60637,60696..60708,60761..60889,61149..61942,61968..62007))	Acanthamoeba castellanii str. Neff	14911262
ACA1_180600	CDS	ACA1_180600	NW_004457244.1	62562	63341	D	encoded by transcript ACA1_180600A; uncharacterized protein	join(62562..62668,62739..62822,62892..62961,63080..63182,63325..63341)	Acanthamoeba castellanii str. Neff	14911261
ACA1_180610	CDS	ACA1_180610	NW_004457244.1	63574	64746	R	encoded by transcript ACA1_180610A; tRNA guanosine2'-O-methyltransferase, putative	complement(join(63574..63900,63920..63964,64024..64070,64166..64274,64395..64550,64681..64746))	Acanthamoeba castellanii str. Neff	14911260
ACA1_180620	CDS	ACA1_180620	NW_004457244.1	64837	66025	R	encoded by transcript ACA1_180620A; uncharacterized protein	complement(join(64837..64957,65189..65221,65345..65794,65958..66025))	Acanthamoeba castellanii str. Neff	14911259
ACA1_180630	CDS	ACA1_180630	NW_004457244.1	66261	68046	D	encoded by transcript ACA1_180630A; Peptide-aspartate beta-dioxygenase	join(66261..66497,66667..66847,66950..67116,67227..67561,67710..67804,67952..68046)	Acanthamoeba castellanii str. Neff	14911258
ACA1_180640	CDS	ACA1_180640	NW_004457244.1	69486	73002	D	encoded by transcript ACA1_180640A; tetratricopeptide repeat domain containing protein	join(69486..69685,69712..69799,69837..69949,70148..70336,70482..70836,70965..71039,71160..71211,71431..71621,71741..71965,72102..72249,72346..72452,72588..72798,72824..73002)	Acanthamoeba castellanii str. Neff	14911257
ACA1_180650	CDS	ACA1_180650	NW_004457244.1	73195	73446	R	encoded by transcript ACA1_180650A; uncharacterized protein	complement(73195..73446)	Acanthamoeba castellanii str. Neff	14911256
ACA1_180660	CDS	ACA1_180660	NW_004457244.1	73665	74128	R	encoded by transcript ACA1_180660A; uncharacterized protein	complement(join(73665..73736,73931..74128))	Acanthamoeba castellanii str. Neff	14911255
ACA1_180770	CDS	ACA1_180770	NW_004457244.1	76099	77400	D	encoded by transcript ACA1_180770A; Rasrelated C3 botulinum toxin substrate 1 precursor, putative	join(76099..76153,76265..76328,76439..76507,76599..76725,76871..77005,77071..77136,77239..77400)	Acanthamoeba castellanii str. Neff	14911254
ACA1_180780	CDS	ACA1_180780	NW_004457244.1	78169	81006	R	encoded by transcript ACA1_180780A; RasGEF domain containing protein	complement(join(78169..78245,78384..78519,78608..78808,78941..79046,79152..79330,79458..79683,79809..79947,80074..80647,80777..80965,80995..81006))	Acanthamoeba castellanii str. Neff	14911253
ACA1_180790	CDS	ACA1_180790	NW_004457244.1	82165	82700	R	encoded by transcript ACA1_180790A; uncharacterized protein	complement(join(82165..82255,82352..82475,82610..82670,82683..82700))	Acanthamoeba castellanii str. Neff	14911252
ACA1_180800	CDS	ACA1_180800	NW_004457244.1	83117	84892	R	encoded by transcript ACA1_180800A; nucleolar protein Nop56, putative	complement(join(83117..84441,84594..84795,84866..84892))	Acanthamoeba castellanii str. Neff	14911251
ACA1_180820	CDS	ACA1_180820	NW_004457244.1	102516	107765	D	encoded by transcript ACA1_180820A; HEAT repeat domain containing protein	join(102516..102559,102835..103018,103137..103243,103376..103517,103602..103664,103785..103982,104073..104209,104324..104465,104624..104708,104856..104960,105035..105132,105235..105411,105509..105625,105760..105907,105979..106357,106454..106724,106850..107011,107100..107431,107507..107765)	Acanthamoeba castellanii str. Neff	14911249
ACA1_180830	CDS	ACA1_180830	NW_004457244.1	107860	110402	R	encoded by transcript ACA1_180830A; STAS domain containing protein	complement(join(107860..108414,108520..108642,108749..108858,109074..109175,109339..109424,109543..109645,109758..109848,109962..110149,110279..110402))	Acanthamoeba castellanii str. Neff	14911248
ACA1_180940	CDS	ACA1_180940	NW_004457244.1	110743	115129	R	encoded by transcript ACA1_180940A; sulfate permease subfamily protein	complement(join(110743..111318,111419..111541,111639..111748,111850..111951,112061..112146,112265..112367,112458..112548,112665..112852,112979..113200,113297..113665,113758..113895,113960..114082,114194..114338,114421..114604,114700..114814,114988..115129))	Acanthamoeba castellanii str. Neff	14911247
ACA1_180950	CDS	ACA1_180950	NW_004457244.1	119208	120306	D	encoded by transcript ACA1_180950A; uncharacterized protein	join(<119208..119320,119375..119529,119603..120018,120130..120150,120259..120306)	Acanthamoeba castellanii str. Neff	14911246
ACA1_181160	CDS	ACA1_181160	NW_004457244.1	128446	129745	R	encoded by transcript ACA1_181160A; helicase conserved Cterminal domain containing protein	complement(join(128446..129082,129168..129745))	Acanthamoeba castellanii str. Neff	14911245
ACA1_181170	CDS	ACA1_181170	NW_004457244.1	133733	134464	R	encoded by transcript ACA1_181170A; ribonuclease HII, putative	complement(133733..134464)	Acanthamoeba castellanii str. Neff	14911244
ACA1_181180	CDS	ACA1_181180	NW_004457244.1	134788	134908	D	encoded by transcript ACA1_181180A; uncharacterized protein	join(134788..134890,134901..134908)	Acanthamoeba castellanii str. Neff	14911243
ACA1_181190	CDS	ACA1_181190	NW_004457244.1	135425	136109	D	encoded by transcript ACA1_181190A; uncharacterized protein	join(135425..135819,135887..136109)	Acanthamoeba castellanii str. Neff	14911242
ACA1_181200	CDS	ACA1_181200	NW_004457244.1	141816	143882	D	encoded by transcript ACA1_181200A; uncharacterized protein	join(141816..141992,142368..142488,142864..143098,143365..143435,143668..143882)	Acanthamoeba castellanii str. Neff	14911281
ACA1_181210	CDS	ACA1_181210	NW_004457244.1	146757	149466	R	encoded by transcript ACA1_181210A; PHDfinger domain containing protein	complement(join(146757..146889,146970..147079,147181..147444,147643..147707,147814..148021,148109..148897,149003..149089,149404..149466))	Acanthamoeba castellanii str. Neff	14911280
ACA1_181220	CDS	ACA1_181220	NW_004457244.1	150085	150795	D	encoded by transcript ACA1_181220A; uncharacterized protein	join(150085..150185,150257..150332,150421..150507,150592..150795)	Acanthamoeba castellanii str. Neff	14911241
ACA1_181230	CDS	ACA1_181230	NW_004457244.1	150879	154126	R	encoded by transcript ACA1_181230A; Poly(ADPribose) polymerase catalytic domain containing protein	complement(join(150879..151023,151138..151345,151447..151504,151582..151704,151791..152067,152133..152262,152338..152509,152647..152755,152864..152939,153025..153121,153222..153272,153367..153485,153594..153694,153800..153885,153983..154126))	Acanthamoeba castellanii str. Neff	14911237
ACA1_181240	CDS	ACA1_181240	NW_004457244.1	154289	155831	D	encoded by transcript ACA1_181240A; 4nitrophenylphosphatase-like protein	join(154289..154370,154443..154510,154668..154901,155008..155064,155169..155188,155267..155394,155500..155831)	Acanthamoeba castellanii str. Neff	14911240
ACA1_181250	CDS	ACA1_181250	NW_004457244.1	155888	158009	R	encoded by transcript ACA1_181250A; amyloid beta precursor proteinbinding protein 1 isoform 6, putative	complement(join(155888..156258,156339..156513,156629..157137,157245..157598,157747..157850,157954..158009))	Acanthamoeba castellanii str. Neff	14911236
ACA1_181260	CDS	ACA1_181260	NW_004457244.1	158152	158800	R	encoded by transcript ACA1_181260A; uncharacterized protein	complement(join(158152..158446,158518..158634,158658..>158800))	Acanthamoeba castellanii str. Neff	14911239
ACA1_181280	CDS	ACA1_181280	NW_004457244.1	163865	165063	D	encoded by transcript ACA1_181280A; partitioning defective 1, putative	join(163865..163879,163912..164268,164506..164608,164648..164679,164860..165063)	Acanthamoeba castellanii str. Neff	14911238
ACA1_022040	CDS	ACA1_022040	NW_004457243.1	973	2211	D	encoded by transcript ACA1_022040A; uncharacterized protein	join(973..1073,1206..1461,1484..1566,1699..1839,1929..2211)	Acanthamoeba castellanii str. Neff	14911234
ACA1_022050	CDS	ACA1_022050	NW_004457243.1	2627	3460	R	encoded by transcript ACA1_022050A; CXCXC repeat protein	complement(2627..3460)	Acanthamoeba castellanii str. Neff	14911233
ACA1_022070	CDS	ACA1_022070	NW_004457243.1	8987	11183	R	encoded by transcript ACA1_022070A; uncharacterized protein	complement(join(8987..9159,9444..9515,9585..9686,9758..9883,9941..10009,10082..10249,10316..10419,10503..10647,10844..10919,11052..11183))	Acanthamoeba castellanii str. Neff	14911231
ACA1_022080	CDS	ACA1_022080	NW_004457243.1	11854	15136	D	encoded by transcript ACA1_022080A; Ankyrin repeat RhoGAP domain containing protein	join(11854..12058,12187..12378,12500..12960,13090..13271,13419..13998,14108..14284,14349..14495,14596..14713,14819..14920,15006..15136)	Acanthamoeba castellanii str. Neff	14911230
ACA1_107750	CDS	ACA1_107750	NW_004457242.1	34	162	R	encoded by transcript ACA1_107750A; uncharacterized protein	complement(<34..162)	Acanthamoeba castellanii str. Neff	14911219
ACA1_107760	CDS	ACA1_107760	NW_004457242.1	428	852	R	encoded by transcript ACA1_107760A; uncharacterized protein	complement(join(428..597,828..852))	Acanthamoeba castellanii str. Neff	14911204
ACA1_107870	CDS	ACA1_107870	NW_004457242.1	2061	3437	R	encoded by transcript ACA1_107870A; UBA/TSN domain containing protein	complement(join(2061..2230,2316..2414,2494..2563,2649..2744,2828..2896,2980..3066,3150..3293,3402..>3437))	Acanthamoeba castellanii str. Neff	14911189
ACA1_107980	CDS	ACA1_107980	NW_004457242.1	5266	5860	R	encoded by transcript ACA1_107980A; uncharacterized protein	complement(join(<5266..5359,5458..5560,5707..5745,5806..5860))	Acanthamoeba castellanii str. Neff	14911181
ACA1_108090	CDS	ACA1_108090	NW_004457242.1	6650	10470	D	encoded by transcript ACA1_108090A; uncharacterized protein	join(6650..6740,6765..7027,7116..7741,10233..10470)	Acanthamoeba castellanii str. Neff	14911229
ACA1_108200	CDS	ACA1_108200	NW_004457242.1	10538	11870	R	encoded by transcript ACA1_108200A; uncharacterized protein	complement(join(10538..10738,10869..11050,11112..11256,11343..11870))	Acanthamoeba castellanii str. Neff	14911221
ACA1_108210	CDS	ACA1_108210	NW_004457242.1	12052	16430	R	encoded by transcript ACA1_108210A; PH domain containing protein	complement(join(12052..12839,12930..13027,13090..13246,13335..13418,13523..13631,13706..13848,13929..14062,14224..14360,14430..14769,14868..14938,15024..15134,15237..15656,15723..15817,15834..15871,15895..16430))	Acanthamoeba castellanii str. Neff	14911217
ACA1_108220	CDS	ACA1_108220	NW_004457242.1	16833	18032	D	encoded by transcript ACA1_108220A; uncharacterized protein	join(16833..17262,17337..17705,17794..18032)	Acanthamoeba castellanii str. Neff	14911226
ACA1_108230	CDS	ACA1_108230	NW_004457242.1	18243	20142	R	encoded by transcript ACA1_108230A; uncharacterized protein	complement(join(18243..18454,18536..18908,18996..19171,19245..19480,19633..19764,19967..20142))	Acanthamoeba castellanii str. Neff	14911222
ACA1_108240	CDS	ACA1_108240	NW_004457242.1	20454	21212	R	encoded by transcript ACA1_108240A; START domain containing protein	complement(join(20454..21032,21114..21212))	Acanthamoeba castellanii str. Neff	14911180
ACA1_108250	CDS	ACA1_108250	NW_004457242.1	21685	22443	D	encoded by transcript ACA1_108250A; uncharacterized protein	join(21685..21715,21785..21846,21904..22443)	Acanthamoeba castellanii str. Neff	14911183
ACA1_108260	CDS	ACA1_108260	NW_004457242.1	22573	24588	R	encoded by transcript ACA1_108260A; prenylcysteine oxidase	complement(join(22573..22710,22797..22958,23030..23165,23239..23407,23501..23593,23679..23738,23803..23922,24013..24195,24263..24335,24408..24517,24531..24588))	Acanthamoeba castellanii str. Neff	14911184
ACA1_108270	CDS	ACA1_108270	NW_004457242.1	25111	29044	D	encoded by transcript ACA1_108270A; transferrin receptor family dimerization domain containing protein	join(25111..25546,25648..25774,25858..25987,26075..26215,26315..26399,26484..26603,26696..26793,26869..26977,27057..27197,27286..27421,27494..27630,27719..27858,27943..28038,28105..28229,28325..28478,28574..28632,28740..28799,28903..29044)	Acanthamoeba castellanii str. Neff	14911187
ACA1_108280	CDS	ACA1_108280	NW_004457242.1	29298	29699	D	encoded by transcript ACA1_108280A; uncharacterized protein	join(29298..29429,29502..29699)	Acanthamoeba castellanii str. Neff	14911197
ACA1_108290	CDS	ACA1_108290	NW_004457242.1	30221	31229	R	encoded by transcript ACA1_108290A; SNAP receptor complex member 1	complement(join(30221..30348,30415..30497,30582..30683,30765..30826,30897..31013,31074..31229))	Acanthamoeba castellanii str. Neff	14911178
ACA1_108300	CDS	ACA1_108300	NW_004457242.1	31458	33077	D	encoded by transcript ACA1_108300A; Poly(ADPribose) polymerase catalytic domain containing protein	join(31458..31529,31832..31883,31954..32169,32238..32304,32388..32476,32538..32647,32732..32833,32910..33077)	Acanthamoeba castellanii str. Neff	14911191
ACA1_108420	CDS	ACA1_108420	NW_004457242.1	36500	37230	D	encoded by transcript ACA1_108420A; GTP binding protein	join(36500..36520,36587..36700,36841..36928,37008..37068,37146..37230)	Acanthamoeba castellanii str. Neff	14911225
ACA1_108530	CDS	ACA1_108530	NW_004457242.1	39051	42023	R	encoded by transcript ACA1_108530A; EF hand domain containing protein	complement(join(39051..39169,39245..39319,39405..39480,39605..40667,40950..41233,41463..41488,41783..42023))	Acanthamoeba castellanii str. Neff	14911186
ACA1_108540	CDS	ACA1_108540	NW_004457242.1	42508	42943	R	encoded by transcript ACA1_108540A; uncharacterized protein	complement(join(42508..42783,42857..42943))	Acanthamoeba castellanii str. Neff	14911192
ACA1_108550	CDS	ACA1_108550	NW_004457242.1	42965	44102	R	encoded by transcript ACA1_108550A; uncharacterized protein	complement(join(42965..43074,43132..43177,43302..43576,44084..44102))	Acanthamoeba castellanii str. Neff	14911202
ACA1_108560	CDS	ACA1_108560	NW_004457242.1	45729	46772	D	encoded by transcript ACA1_108560A; uncharacterized protein	join(45729..45866,45994..46076,46128..46230,46297..46511,46637..46772)	Acanthamoeba castellanii str. Neff	14911207
ACA1_108570	CDS	ACA1_108570	NW_004457242.1	48110	50389	D	encoded by transcript ACA1_108570A; uncharacterized protein	join(48110..48317,48382..48620,49108..49584,49642..49929,49991..50389)	Acanthamoeba castellanii str. Neff	14911223
ACA1_108580	CDS	ACA1_108580	NW_004457242.1	50640	51145	R	encoded by transcript ACA1_108580A; uncharacterized protein	complement(join(50640..50794,50883..50971,51006..51145))	Acanthamoeba castellanii str. Neff	14911228
ACA1_108600	CDS	ACA1_108600	NW_004457242.1	53849	62644	D	encoded by transcript ACA1_108600A; myosin head (motor domain) domain containing protein	join(53849..53986,54071..54261,54340..54447,54519..54579,54675..54768,54930..54998,55119..55225,55306..55435,55539..55687,55790..55909,56004..56093,56171..56253,56327..56669,56747..56871,56942..57065,57193..57297,57380..57444,57527..57584,57742..58169,58245..58398,58489..58697,58802..59211,59547..59721,59824..59925,60055..60157,60265..60330,60451..60557,60679..60793,60900..60958,61045..61166,61303..61418,61491..61530,61653..62030,62126..62225,62301..62448,62555..62644)	Acanthamoeba castellanii str. Neff	14911193
ACA1_108610	CDS	ACA1_108610	NW_004457242.1	62737	64659	D	encoded by transcript ACA1_108610A; MyTH4 domain containing protein	join(62737..62799,62931..62978,63114..63278,63490..63624,63727..63772,64083..64182,64262..64409,64504..64659)	Acanthamoeba castellanii str. Neff	14911194
ACA1_108720	CDS	ACA1_108720	NW_004457242.1	64696	66662	D	encoded by transcript ACA1_108720A; FERM central domain containing protein	join(64696..64900,65019..65125,65221..65289,65423..65470,65592..65713,65850..65994,66097..66199,66326..66420,66519..66662)	Acanthamoeba castellanii str. Neff	14911211
ACA1_108730	CDS	ACA1_108730	NW_004457242.1	66772	67767	R	encoded by transcript ACA1_108730A; uncharacterized protein	complement(join(66772..66985,67081..67249,67324..67391,67458..67587,67698..67767))	Acanthamoeba castellanii str. Neff	14911188
ACA1_108740	CDS	ACA1_108740	NW_004457242.1	67866	69055	R	encoded by transcript ACA1_108740A; uncharacterized protein	complement(join(67866..67975,68043..68146,68231..68312,68416..68489,68575..68641,68683..68749,68774..68830,68996..69055))	Acanthamoeba castellanii str. Neff	14911201
ACA1_108750	CDS	ACA1_108750	NW_004457242.1	70141	72649	R	encoded by transcript ACA1_108750A; uncharacterized protein	complement(join(70141..70560,70738..71205,71410..71856,72055..72257,72580..72649))	Acanthamoeba castellanii str. Neff	14911224
ACA1_108760	CDS	ACA1_108760	NW_004457242.1	73101	74845	R	encoded by transcript ACA1_108760A; RhoGEF domain containing protein	complement(join(73101..74357,74552..74845))	Acanthamoeba castellanii str. Neff	14911200
ACA1_108770	CDS	ACA1_108770	NW_004457242.1	75705	77566	D	encoded by transcript ACA1_108770A; pyridine nucleotidedisulfide oxidoreductase domain containing protein	join(75705..75969,76055..76194,76313..76522,76606..76802,76870..76967,77096..77259,77351..77566)	Acanthamoeba castellanii str. Neff	14911210
ACA1_108780	CDS	ACA1_108780	NW_004457242.1	78083	80212	D	encoded by transcript ACA1_108780A; phospholipase D, putative	join(78083..78304,78466..78646,78695..78753,78775..78892,78983..79088,79170..79245,79356..79481,79560..79639,79745..79955,80048..80212)	Acanthamoeba castellanii str. Neff	14911214
ACA1_108790	CDS	ACA1_108790	NW_004457242.1	80489	80794	D	encoded by transcript ACA1_108790A; uncharacterized protein	join(80489..80548,80612..80794)	Acanthamoeba castellanii str. Neff	14911185
ACA1_108800	CDS	ACA1_108800	NW_004457242.1	81160	82353	D	encoded by transcript ACA1_108800A; CBS domain containing protein	join(81160..81228,81310..81487,81585..81754,81844..82054,82142..82353)	Acanthamoeba castellanii str. Neff	14911218
ACA1_108810	CDS	ACA1_108810	NW_004457242.1	82492	88072	R	encoded by transcript ACA1_108810A; SNF2 family protein	complement(join(82492..82620,82647..82682,82720..82862,82998..83134,83238..83496,83592..83741,83851..84034,84162..84293,84402..84449,84591..85075,85202..85282,85473..85626,85720..85848,85944..86045,86144..86188,86281..86610,86683..87009,87198..87266,87390..87554,87625..87753,87989..88072))	Acanthamoeba castellanii str. Neff	14911198
ACA1_108820	CDS	ACA1_108820	NW_004457242.1	88767	89287	D	encoded by transcript ACA1_108820A; SNARE domain containing protein	join(88767..89101,89224..89287)	Acanthamoeba castellanii str. Neff	14911203
ACA1_108830	CDS	ACA1_108830	NW_004457242.1	89830	94046	D	encoded by transcript ACA1_108830A; cycloartenol synthase	join(89830..89979,90135..90273,90409..90517,90669..90816,90902..91004,91109..91212,91306..91417,91837..91955,92067..92192,92299..92421,92524..92620,92721..92769,92857..93002,93093..93198,93284..93343,93435..93594,93674..93920,93997..94046)	Acanthamoeba castellanii str. Neff	14911216
ACA1_108840	CDS	ACA1_108840	NW_004457242.1	94129	96509	R	encoded by transcript ACA1_108840A; adenosine deaminase, tRNAspecific 1, putative	complement(join(94129..94312,94375..94464,94558..94663,94742..94849,94932..95092,95226..95288,95300..95744,95793..96001,96075..96168,96249..96331,96403..96509))	Acanthamoeba castellanii str. Neff	14911220
ACA1_108860	CDS	ACA1_108860	NW_004457242.1	99071	99729	R	encoded by transcript ACA1_108860A; uncharacterized protein	complement(join(99071..99178,99245..99334,99427..99528,99622..>99729))	Acanthamoeba castellanii str. Neff	14911190
ACA1_108970	CDS	ACA1_108970	NW_004457242.1	104491	105728	D	encoded by transcript ACA1_108970A; MyTH4 domain containing protein	join(<104491..104666,104762..105171,105288..105462,105567..>105728)	Acanthamoeba castellanii str. Neff	14911199
ACA1_109080	CDS	ACA1_109080	NW_004457242.1	109970	111777	D	encoded by transcript ACA1_109080A; nucleolar RNAassociated protein alpha isoform, putative	join(<109970..110008,110102..110315,110414..110865,110942..111027,111120..111564,111640..111777)	Acanthamoeba castellanii str. Neff	14911179
ACA1_109090	CDS	ACA1_109090	NW_004457242.1	111938	113876	R	encoded by transcript ACA1_109090A; Prokumamolisin, putative	complement(join(111938..113031,113115..113268,113355..113876))	Acanthamoeba castellanii str. Neff	14911213
ACA1_109100	CDS	ACA1_109100	NW_004457242.1	114034	116727	R	encoded by transcript ACA1_109100A; sodium symporter, putative	complement(join(114034..114327,114418..114579,114654..114857,114939..115118,115185..115282,115350..115401,115477..115591,115668..115761,115852..115886,115960..116146,116224..116418,116511..116727))	Acanthamoeba castellanii str. Neff	14911196
ACA1_109110	CDS	ACA1_109110	NW_004457242.1	116920	119144	D	encoded by transcript ACA1_109110A; pyridine nucleotidedisulfide oxidoreductase family protein	join(116920..117088,117186..117316,117442..117651,117737..117930,118005..118102,118180..118343,118431..118559,118642..118710,118818..118945,119048..119144)	Acanthamoeba castellanii str. Neff	14911215
ACA1_109120	CDS	ACA1_109120	NW_004457242.1	119342	121147	R	encoded by transcript ACA1_109120A; uncharacterized protein	complement(119342..121147)	Acanthamoeba castellanii str. Neff	14911195
ACA1_109130	CDS	ACA1_109130	NW_004457242.1	121943	127953	D	encoded by transcript ACA1_109130A; serine/threonine kinase	join(121943..123442,123576..124670,124766..124882,124983..125288,125382..127105,127198..127620,127713..127953)	Acanthamoeba castellanii str. Neff	14911205
ACA1_109140	CDS	ACA1_109140	NW_004457242.1	129881	132121	D	encoded by transcript ACA1_109140A; kelch repeat-containing protein	join(129881..130568,130669..130830,130920..131084,131163..131378,131470..131616,131738..131918,132001..>132121)	Acanthamoeba castellanii str. Neff	14911209
ACA1_109250	CDS	ACA1_109250	NW_004457242.1	136015	137198	D	encoded by transcript ACA1_109250A; uncharacterized protein	join(136015..136042,136873..137198)	Acanthamoeba castellanii str. Neff	14911208
ACA1_109360	CDS	ACA1_109360	NW_004457242.1	142419	143741	R	encoded by transcript ACA1_109360A; oxidoreductaselike, putative	complement(join(142419..142511,142693..142836,142909..143028,143117..143172,143494..143626,143694..143741))	Acanthamoeba castellanii str. Neff	14911212
ACA1_018340	mRNA	ACA1_018340	NW_004457733.1	47	6915	R	ACA1_018340	complement(join(<47..129,230..282,352..467,622..693,1437..1510,1601..1804,1884..1988,2079..2217,2465..2691,2758..3184,4432..5104,5161..5309,5404..5571,6224..6357,6434..6545,6751..>6915))	Acanthamoeba castellanii str. Neff	14926822
ACA1_018650	mRNA	ACA1_018650	NW_004457733.1	7250	9227	R	ACA1_018650	complement(join(<7250..7518,7633..8156,8866..>9227))	Acanthamoeba castellanii str. Neff	14926803
ACA1_018760	mRNA	ACA1_018760	NW_004457733.1	10283	11889	D	ACA1_018760	join(<10283..10367,10439..10572,10643..10849,10951..11041,11148..11268,11349..11482,11574..11657,11771..>11889)	Acanthamoeba castellanii str. Neff	14926804
ACA1_018770	mRNA	ACA1_018770	NW_004457733.1	12222	14942	D	ACA1_018770	join(<12222..12327,12429..12606,12751..13023,13158..13353,13467..13551,13679..13978,14171..14324,14395..14524,14592..>14942)	Acanthamoeba castellanii str. Neff	14926805
ACA1_018780	mRNA	ACA1_018780	NW_004457733.1	15067	17708	R	ACA1_018780	complement(join(<15067..15081,15170..15613,15721..15861,15964..16065,16150..16309,16454..16536,16631..16696,16778..16824,16911..16970,17067..17177,17292..17421,17544..>17708))	Acanthamoeba castellanii str. Neff	14926806
ACA1_018790	mRNA	ACA1_018790	NW_004457733.1	17911	20641	R	ACA1_018790	complement(join(<17911..17936,17956..18084,18120..18216,18284..18397,18472..18508,18592..18864,18942..19081,19163..19369,19432..19542,19665..19759,19819..19933,20057..>20641))	Acanthamoeba castellanii str. Neff	14926807
ACA1_018800	mRNA	ACA1_018800	NW_004457733.1	21044	23491	R	ACA1_018800	complement(join(<21044..21284,21358..21516,21599..22077,22146..22333,22408..22531,22633..22727,22812..22921,23001..23089,23195..23283,23365..>23491))	Acanthamoeba castellanii str. Neff	14926808
ACA1_018810	mRNA	ACA1_018810	NW_004457733.1	23996	25608	D	ACA1_018810	join(<23996..24431,24534..24899,25008..25119,25193..25338,25460..>25608)	Acanthamoeba castellanii str. Neff	14926809
ACA1_018920	mRNA	ACA1_018920	NW_004457733.1	25843	28388	R	ACA1_018920	complement(join(<25843..25893,26034..26143,26306..26702,26821..26907,26980..27096,27199..27267,27378..27476,27561..>28388))	Acanthamoeba castellanii str. Neff	14926810
ACA1_018930	mRNA	ACA1_018930	NW_004457733.1	28767	30818	D	ACA1_018930	join(<28767..29029,29128..29470,29568..29708,29848..29969,30123..30255,30353..30466,30548..30673,30771..>30818)	Acanthamoeba castellanii str. Neff	14926811
ACA1_018940	mRNA	ACA1_018940	NW_004457733.1	30959	31692	R	ACA1_018940	complement(join(<30959..31116,31193..31279,31342..31428,31515..>31692))	Acanthamoeba castellanii str. Neff	14926812
ACA1_018950	mRNA	ACA1_018950	NW_004457733.1	32913	33960	R	ACA1_018950	complement(join(<32913..33190,33282..33433,33518..33712,33947..>33960))	Acanthamoeba castellanii str. Neff	14926813
ACA1_018960	mRNA	ACA1_018960	NW_004457733.1	34120	35989	R	ACA1_018960	complement(join(<34120..34209,34326..34466,34562..34681,34795..35000,35108..35191,35275..35673,35878..>35989))	Acanthamoeba castellanii str. Neff	14926814
ACA1_018970	mRNA	ACA1_018970	NW_004457733.1	36179	36622	R	ACA1_018970	complement(join(<36179..36354,36412..>36622))	Acanthamoeba castellanii str. Neff	14926815
ACA1_018980	mRNA	ACA1_018980	NW_004457733.1	37064	38136	R	ACA1_018980	complement(join(<37064..37164,37283..37397,37561..37661,37755..37791,37942..>38136))	Acanthamoeba castellanii str. Neff	14926816
ACA1_018990	mRNA	ACA1_018990	NW_004457733.1	38309	45842	R	ACA1_018990	complement(join(<38309..38602,38701..38876,38976..39086,39175..39269,39389..39584,39718..40051,40208..40320,40463..40553,40663..40773,40855..41865,41960..42045,42130..42217,42316..42514,42576..42787,42913..43007,43087..43201,43263..43387,43482..43578,43670..43785,44031..44432,44566..44659,44737..44828,44923..45175,45268..45404,45510..45552,45675..>45842))	Acanthamoeba castellanii str. Neff	14926817
ACA1_019000	mRNA	ACA1_019000	NW_004457733.1	46050	46500	D	ACA1_019000	join(<46050..46191,46268..>46500)	Acanthamoeba castellanii str. Neff	14926818
ACA1_019010	mRNA	ACA1_019010	NW_004457733.1	46618	47048	R	ACA1_019010	complement(join(<46618..46811,46907..>47048))	Acanthamoeba castellanii str. Neff	14926819
ACA1_019020	mRNA	ACA1_019020	NW_004457733.1	47268	48518	D	ACA1_019020	join(<47268..47355,47544..47653,47755..48055,48179..48264,48405..>48518)	Acanthamoeba castellanii str. Neff	14926820
ACA1_019030	mRNA	ACA1_019030	NW_004457733.1	48573	49800	R	ACA1_019030	complement(join(<48573..48647,48722..48851,48933..49163,49289..49363,49457..49565,49680..>49800))	Acanthamoeba castellanii str. Neff	14926821
ACA1_326570	mRNA	ACA1_326570	NW_004457732.1	5059	7164	D	ACA1_326570	join(<5059..5316,5407..5595,5658..5824,5898..5988,6078..6239,6354..6508,6594..>7164)	Acanthamoeba castellanii str. Neff	14926802
ACA1_326680	mRNA	ACA1_326680	NW_004457732.1	9368	9710	R	ACA1_326680	complement(join(<9368..9461,9493..>9710))	Acanthamoeba castellanii str. Neff	14926779
ACA1_326690	mRNA	ACA1_326690	NW_004457732.1	11851	12142	R	ACA1_326690	complement(join(<11851..12042,12101..>12142))	Acanthamoeba castellanii str. Neff	14926789
ACA1_326700	mRNA	ACA1_326700	NW_004457732.1	12231	13854	R	ACA1_326700	complement(join(<12231..12398,12455..12817,12884..12920,13086..13159,13217..13279,13454..13551,13647..>13854))	Acanthamoeba castellanii str. Neff	14926790
ACA1_326710	mRNA	ACA1_326710	NW_004457732.1	14239	14772	R	ACA1_326710	complement(join(<14239..14256,14338..14538,14596..>14772))	Acanthamoeba castellanii str. Neff	14926791
ACA1_326720	mRNA	ACA1_326720	NW_004457732.1	16013	17000	D	ACA1_326720	join(<16013..16288,16346..16457,16517..16728,16800..>17000)	Acanthamoeba castellanii str. Neff	14926780
ACA1_326730	mRNA	ACA1_326730	NW_004457732.1	18570	19123	D	ACA1_326730	join(<18570..18614,18644..>19123)	Acanthamoeba castellanii str. Neff	14926781
ACA1_326740	mRNA	ACA1_326740	NW_004457732.1	19318	24365	R	ACA1_326740	complement(join(<19318..23305,23483..23667,23738..23887,24159..>24365))	Acanthamoeba castellanii str. Neff	14926782
ACA1_326750	mRNA	ACA1_326750	NW_004457732.1	25024	28264	R	ACA1_326750	complement(join(<25024..25348,25445..26312,26395..27281,27414..27550,27638..27810,27940..28130,28227..>28264))	Acanthamoeba castellanii str. Neff	14926783
ACA1_326760	mRNA	ACA1_326760	NW_004457732.1	29574	30845	D	ACA1_326760	join(<29574..29703,29778..30181,30277..30448,30529..>30845)	Acanthamoeba castellanii str. Neff	14926784
ACA1_326770	mRNA	ACA1_326770	NW_004457732.1	30981	32578	R	ACA1_326770	complement(join(<30981..32029,32134..>32578))	Acanthamoeba castellanii str. Neff	14926785
ACA1_326780	mRNA	ACA1_326780	NW_004457732.1	32929	33794	D	ACA1_326780	join(<32929..33054,33114..33182,33239..33323,33418..33535,33592..33647,33698..33756,33777..>33794)	Acanthamoeba castellanii str. Neff	14926786
ACA1_326790	mRNA	ACA1_326790	NW_004457732.1	34548	40863	R	ACA1_326790	complement(join(<34548..34697,34776..35017,35107..35425,35537..35799,35891..35957,36065..36345,36444..36526,36589..36806,36883..37415,37553..37626,37750..37833,37909..38035,38143..39219,39337..39919,39989..40045,40174..40347,40449..40514,40607..40639,40690..>40863))	Acanthamoeba castellanii str. Neff	14926787
ACA1_326800	mRNA	ACA1_326800	NW_004457732.1	41281	42718	D	ACA1_326800	join(<41281..41514,41600..41702,41807..41923,42000..42079,42194..42312,42398..42467,42578..>42718)	Acanthamoeba castellanii str. Neff	14926788
ACA1_326820	mRNA	ACA1_326820	NW_004457732.1	49957	50742	D	ACA1_326820	join(<49957..49962,50019..50105,50197..50588,50667..>50742)	Acanthamoeba castellanii str. Neff	14926793
ACA1_326830	mRNA	ACA1_326830	NW_004457732.1	50868	51383	R	ACA1_326830	complement(join(<50868..50942,51024..51088,51173..>51383))	Acanthamoeba castellanii str. Neff	14926794
ACA1_326840	mRNA	ACA1_326840	NW_004457732.1	51451	53273	D	ACA1_326840	join(<51451..51546,51640..52204,52281..52350,52435..52522,52601..52703,52780..52895,52992..53132,53211..>53273)	Acanthamoeba castellanii str. Neff	14926795
ACA1_326850	mRNA	ACA1_326850	NW_004457732.1	53724	55236	D	ACA1_326850	join(<53724..53838,54017..54215,54289..54366,54442..54657,54738..>55236)	Acanthamoeba castellanii str. Neff	14926796
ACA1_326860	mRNA	ACA1_326860	NW_004457732.1	55381	59390	R	ACA1_326860	complement(join(<55381..55509,55586..55637,55732..55930,56019..56074,56155..56275,56372..56511,56617..56693,56706..56825,56958..57047,57142..57516,57608..57632,57751..57903,57991..58081,58180..58270,58350..58930,59014..59219,59302..>59390))	Acanthamoeba castellanii str. Neff	14926797
ACA1_326870	mRNA	ACA1_326870	NW_004457732.1	59962	61761	D	ACA1_326870	join(<59962..61188,61265..61354,61654..>61761)	Acanthamoeba castellanii str. Neff	14926798
ACA1_326880	mRNA	ACA1_326880	NW_004457732.1	62348	64293	R	ACA1_326880	complement(join(<62348..62426,62447..62503,62554..62975,63027..63377,63470..63541,63625..>64293))	Acanthamoeba castellanii str. Neff	14926799
ACA1_326890	mRNA	ACA1_326890	NW_004457732.1	64873	67030	D	ACA1_326890	join(<64873..65081,65222..65360,65470..65625,65707..65856,65940..66093,66229..66354,66631..66698,66762..66849,66942..>67030)	Acanthamoeba castellanii str. Neff	14926800
ACA1_326900	mRNA	ACA1_326900	NW_004457732.1	67508	69787	D	ACA1_326900	join(<67508..69019,69032..>69787)	Acanthamoeba castellanii str. Neff	14926801
ACA1_308130	mRNA	ACA1_308130	NW_004457731.1	1083	1555	D	ACA1_308130	join(<1083..1233,1301..1394,1549..>1555)	Acanthamoeba castellanii str. Neff	14926778
ACA1_308240	mRNA	ACA1_308240	NW_004457731.1	2426	8325	D	ACA1_308240	join(<2426..2482,2581..2688,2750..2946,3148..3331,3409..3478,4398..5083,5721..6228,6243..6829,7440..7456,7471..7526,7593..7731,7799..7891,7987..8143,8236..>8325)	Acanthamoeba castellanii str. Neff	14926776
ACA1_308650	mRNA	ACA1_308650	NW_004457731.1	12355	15452	R	ACA1_308650	complement(join(<12355..12855,12927..13007,13085..13208,14096..14205,14269..14352,14376..>15452))	Acanthamoeba castellanii str. Neff	14926773
ACA1_308760	mRNA	ACA1_308760	NW_004457731.1	15689	15913	R	ACA1_308760	complement(<15689..>15913)	Acanthamoeba castellanii str. Neff	14926777
ACA1_308770	mRNA	ACA1_308770	NW_004457731.1	16095	17950	R	ACA1_308770	complement(join(<16095..16283,16362..16542,16632..16759,16844..16896,16962..17061,17155..17305,17395..17657,17729..>17950))	Acanthamoeba castellanii str. Neff	14926774
ACA1_308780	mRNA	ACA1_308780	NW_004457731.1	18214	20013	R	ACA1_308780	complement(join(<18214..18220,18313..18470,18590..19609,19684..19763,19845..>20013))	Acanthamoeba castellanii str. Neff	14926775
ACA1_084600	mRNA	ACA1_084600	NW_004457730.1	95	973	R	ACA1_084600	complement(join(<95..180,261..337,432..596,732..>973))	Acanthamoeba castellanii str. Neff	14926772
ACA1_084810	mRNA	ACA1_084810	NW_004457730.1	5144	5542	R	ACA1_084810	complement(<5144..>5542)	Acanthamoeba castellanii str. Neff	14926741
ACA1_084820	mRNA	ACA1_084820	NW_004457730.1	6170	10920	D	ACA1_084820	join(<6170..6508,6677..6754,6827..6900,6984..7103,7283..7406,7534..8219,8288..8384,8459..8597,8703..8764,8850..8931,9017..9172,9261..9324,9417..9548,9695..9844,9980..10088,10274..10333,10418..10523,10705..10748,10816..>10920)	Acanthamoeba castellanii str. Neff	14926742
ACA1_084830	mRNA	ACA1_084830	NW_004457730.1	11982	14039	R	ACA1_084830	complement(join(<11982..13526,13679..13828,13935..>14039))	Acanthamoeba castellanii str. Neff	14926751
ACA1_084840	mRNA	ACA1_084840	NW_004457730.1	14469	15833	D	ACA1_084840	join(<14469..15185,15275..15430,15507..15566,15681..>15833)	Acanthamoeba castellanii str. Neff	14926743
ACA1_084850	mRNA	ACA1_084850	NW_004457730.1	15962	20130	R	ACA1_084850	complement(join(<15962..16039,16151..16273,16342..16422,16524..16592,16654..16768,16850..17096,17185..17478,17544..17625,17707..17803,17906..18015,18151..18268,18357..18507,18596..18689,18778..18878,18994..19150,19262..19621,19710..19832,19909..20022,20083..>20130))	Acanthamoeba castellanii str. Neff	14926744
ACA1_084860	mRNA	ACA1_084860	NW_004457730.1	20344	26710	R	ACA1_084860	complement(join(<20344..20466,20532..20773,20858..20947,21024..21102,21173..21476,21546..21599,21672..21745,21816..21874,21942..22020,22108..22246,22328..22435,22501..22775,22898..23009,23087..23178,23269..23331,23409..23519,23611..23716,23793..23950,24014..24256,24321..24488,24570..24737,24809..24985,25059..25177,25241..25376,25437..25540,25611..25709,25788..25854,25951..26119,26190..26374,26489..>26710))	Acanthamoeba castellanii str. Neff	14926745
ACA1_084880	mRNA	ACA1_084880	NW_004457730.1	29240	31085	R	ACA1_084880	complement(join(<29240..30434,30563..30885,30993..>31085))	Acanthamoeba castellanii str. Neff	14926747
ACA1_084890	mRNA	ACA1_084890	NW_004457730.1	31476	32015	D	ACA1_084890	<31476..>32015	Acanthamoeba castellanii str. Neff	14926748
ACA1_084900	mRNA	ACA1_084900	NW_004457730.1	32236	34121	D	ACA1_084900	join(<32236..32340,32460..32609,32787..>34121)	Acanthamoeba castellanii str. Neff	14926749
ACA1_084920	mRNA	ACA1_084920	NW_004457730.1	34965	36715	D	ACA1_084920	join(<34965..35080,35176..35230,35298..35419,35482..35596,35684..35757,35832..35910,35990..36064,36162..36359,36447..36549,36708..>36715)	Acanthamoeba castellanii str. Neff	14926752
ACA1_084930	mRNA	ACA1_084930	NW_004457730.1	37625	38244	R	ACA1_084930	complement(join(<37625..37705,37835..38052,38163..>38244))	Acanthamoeba castellanii str. Neff	14926753
ACA1_085040	mRNA	ACA1_085040	NW_004457730.1	41302	44002	R	ACA1_085040	complement(join(<41302..41339,41452..41878,41984..43618,43754..>44002))	Acanthamoeba castellanii str. Neff	14926754
ACA1_085050	mRNA	ACA1_085050	NW_004457730.1	44475	51951	R	ACA1_085050	complement(join(<44475..44727,44791..45133,45220..45327,45410..45490,45563..45962,46063..46188,46293..46480,46576..46712,46799..46922,47026..47184,47257..47418,47504..47668,47727..47907,48009..48070,48145..48303,48407..48500,48583..48699,48809..48879,48951..49074,49201..49349,49422..49545,49636..49773,49887..50129,50257..50422,50505..50629,50857..>51951))	Acanthamoeba castellanii str. Neff	14926755
ACA1_085170	mRNA	ACA1_085170	NW_004457730.1	60172	67294	D	ACA1_085170	join(<60172..60226,60452..60524,60605..61159,61247..61381,61456..61619,61688..61763,61838..61928,61998..62185,62268..62485,62586..62727,62810..62972,63048..63200,63282..63406,63496..63626,63723..63859,63969..64105,64204..64271,64478..64665,64762..64898,65041..65167,65288..65390,65475..65558,65690..65822,65901..66045,66216..66331,66458..66573,66653..66906,67139..>67294)	Acanthamoeba castellanii str. Neff	14926757
ACA1_085180	mRNA	ACA1_085180	NW_004457730.1	67376	68615	R	ACA1_085180	complement(join(<67376..67747,67917..68025,68058..68110,68204..68339,68557..>68615))	Acanthamoeba castellanii str. Neff	14926758
ACA1_085190	mRNA	ACA1_085190	NW_004457730.1	68923	71523	R	ACA1_085190	complement(join(<68923..70416,70788..70923,71468..>71523))	Acanthamoeba castellanii str. Neff	14926759
ACA1_085200	mRNA	ACA1_085200	NW_004457730.1	72429	73068	R	ACA1_085200	complement(join(<72429..72578,72683..72777,72906..>73068))	Acanthamoeba castellanii str. Neff	14926760
ACA1_085210	mRNA	ACA1_085210	NW_004457730.1	73221	74817	D	ACA1_085210	join(<73221..73576,73657..73888,74019..74239,74326..74539,74614..>74817)	Acanthamoeba castellanii str. Neff	14926761
ACA1_085220	mRNA	ACA1_085220	NW_004457730.1	75499	76776	D	ACA1_085220	join(<75499..75999,76078..>76776)	Acanthamoeba castellanii str. Neff	14926762
ACA1_085230	mRNA	ACA1_085230	NW_004457730.1	77974	79054	R	ACA1_085230	complement(join(<77974..78114,78178..78836,78901..>79054))	Acanthamoeba castellanii str. Neff	14926763
ACA1_085240	mRNA	ACA1_085240	NW_004457730.1	80349	80858	R	ACA1_085240	complement(join(<80349..80492,80561..80626,80685..80721,80818..>80858))	Acanthamoeba castellanii str. Neff	14926764
ACA1_085250	mRNA	ACA1_085250	NW_004457730.1	82825	83405	D	ACA1_085250	join(<82825..83016,83376..>83405)	Acanthamoeba castellanii str. Neff	14926765
ACA1_085260	mRNA	ACA1_085260	NW_004457730.1	85131	85388	R	ACA1_085260	complement(join(<85131..85291,85331..>85388))	Acanthamoeba castellanii str. Neff	14926766
ACA1_085270	mRNA	ACA1_085270	NW_004457730.1	87652	88795	R	ACA1_085270	complement(join(<87652..87668,87916..88578,88642..>88795))	Acanthamoeba castellanii str. Neff	14926767
ACA1_085280	mRNA	ACA1_085280	NW_004457730.1	89356	90533	R	ACA1_085280	complement(join(<89356..89778,89854..89922,89987..90169,90235..90303,90362..90398,90493..>90533))	Acanthamoeba castellanii str. Neff	14926768
ACA1_085290	mRNA	ACA1_085290	NW_004457730.1	90956	93925	R	ACA1_085290	complement(join(<90956..91086,91181..91198,91360..91594,93164..93251,93343..93546,93726..>93925))	Acanthamoeba castellanii str. Neff	14926769
ACA1_085500	mRNA	ACA1_085500	NW_004457730.1	96156	98390	D	ACA1_085500	join(<96156..96249,96382..96454,96549..96620,96717..96828,96937..97029,97107..97207,97283..97443,97528..97603,97702..97865,97961..98126,98198..>98390)	Acanthamoeba castellanii str. Neff	14926770
ACA1_085610	mRNA	ACA1_085610	NW_004457730.1	102320	103124	R	ACA1_085610	complement(join(<102320..102655,102768..>103124))	Acanthamoeba castellanii str. Neff	14926771
ACA1_048850	mRNA	ACA1_048850	NW_004457727.1	49	1639	R	ACA1_048850	complement(join(<49..685,777..>1639))	Acanthamoeba castellanii str. Neff	14926738
ACA1_048860	mRNA	ACA1_048860	NW_004457727.1	2109	4877	D	ACA1_048860	join(<2109..2169,2382..2505,2598..2680,2814..2933,3031..3099,3232..3310,3424..3512,3645..3744,3841..3919,4024..4140,4259..4702,4821..>4877)	Acanthamoeba castellanii str. Neff	14926740
ACA1_048870	mRNA	ACA1_048870	NW_004457727.1	5001	7517	R	ACA1_048870	complement(join(<5001..5209,5268..5856,5969..6102,6195..6274,6348..6450,6545..6674,6808..6870,6970..7195,7285..7390,7469..>7517))	Acanthamoeba castellanii str. Neff	14926739
ACA1_048880	mRNA	ACA1_048880	NW_004457727.1	8171	11306	D	ACA1_048880	join(<8171..9878,9937..10024,10101..10197,10269..10471,10597..10720,10819..10921,11017..11134,11219..>11306)	Acanthamoeba castellanii str. Neff	14926736
ACA1_048890	mRNA	ACA1_048890	NW_004457727.1	11440	12580	R	ACA1_048890	complement(join(<11440..11486,11638..11740,11893..11952,12087..12175,12313..>12580))	Acanthamoeba castellanii str. Neff	14926737
ACA1_319420	mRNA	ACA1_319420	NW_004457725.1	1524	2799	R	ACA1_319420	complement(join(<1524..1656,1806..2094,2226..2279,2357..2596,2652..>2799))	Acanthamoeba castellanii str. Neff	14926735
ACA1_319530	mRNA	ACA1_319530	NW_004457725.1	3613	5296	R	ACA1_319530	complement(join(<3613..4068,4150..4195,4779..4974,5077..>5296))	Acanthamoeba castellanii str. Neff	14926734
ACA1_319640	mRNA	ACA1_319640	NW_004457725.1	5535	7406	R	ACA1_319640	complement(join(<5535..5718,5850..5965,6065..6133,6681..6766,6879..7015,7117..7205,7295..7327,7347..>7406))	Acanthamoeba castellanii str. Neff	14926729
ACA1_319950	mRNA	ACA1_319950	NW_004457725.1	13993	16538	R	ACA1_319950	complement(join(<13993..14097,14109..>16538))	Acanthamoeba castellanii str. Neff	14926730
ACA1_319960	mRNA	ACA1_319960	NW_004457725.1	16814	18637	R	ACA1_319960	complement(join(<16814..16891,17028..17227,17333..17524,17614..17737,17820..17912,18041..18130,18251..18346,18476..>18637))	Acanthamoeba castellanii str. Neff	14926731
ACA1_319970	mRNA	ACA1_319970	NW_004457725.1	18842	21369	R	ACA1_319970	complement(join(<18842..18923,19042..19320,19452..19794,19882..20472,20560..20609,20688..20869,20932..21101,21173..21246,21359..>21369))	Acanthamoeba castellanii str. Neff	14926732
ACA1_319980	mRNA	ACA1_319980	NW_004457725.1	21913	23223	R	ACA1_319980	complement(join(<21913..22116,22236..22358,22492..22651,22772..22930,23020..>23223))	Acanthamoeba castellanii str. Neff	14926733
ACA1_119000	mRNA	ACA1_119000	NW_004457724.1	5494	6830	D	ACA1_119000	join(<5494..5753,5814..5839,5979..6058,6172..6264,6369..6382,6437..6504,6658..6698,6810..>6830)	Acanthamoeba castellanii str. Neff	14926728
ACA1_119010	mRNA	ACA1_119010	NW_004457724.1	8664	11693	D	ACA1_119010	join(<8664..8829,8972..9202,9306..9402,9536..9734,10065..10663,10738..10792,10871..10960,11062..11154,11266..11279,11334..11401,11521..11561,11673..>11693)	Acanthamoeba castellanii str. Neff	14926699
ACA1_119120	mRNA	ACA1_119120	NW_004457724.1	12236	14784	R	ACA1_119120	complement(join(<12236..12955,13110..13235,13318..13358,13443..13572,13654..13814,13869..13963,14031..14104,14189..14259,14352..14448,14560..>14784))	Acanthamoeba castellanii str. Neff	14926700
ACA1_119130	mRNA	ACA1_119130	NW_004457724.1	15381	17519	R	ACA1_119130	complement(join(<15381..15467,15551..15639,15835..15956,16131..16270,16363..16535,16632..16914,17014..17093,17204..17265,17377..>17519))	Acanthamoeba castellanii str. Neff	14926701
ACA1_119140	mRNA	ACA1_119140	NW_004457724.1	17787	20445	R	ACA1_119140	complement(join(<17787..19220,19303..19550,19634..19805,19835..19998,20115..>20445))	Acanthamoeba castellanii str. Neff	14926702
ACA1_119150	mRNA	ACA1_119150	NW_004457724.1	24428	30101	R	ACA1_119150	complement(join(<24428..24622,24740..24889,25004..25276,25377..25517,25608..25760,25886..26094,26195..26246,26339..26552,26650..26859,26947..27117,27205..27321,27407..27516,27637..27783,27872..28051,28132..28372,28464..28602,28682..28855,28949..29141,29235..29435,29516..29604,29682..29848,29971..>30101))	Acanthamoeba castellanii str. Neff	14926703
ACA1_119160	mRNA	ACA1_119160	NW_004457724.1	30370	30840	D	ACA1_119160	join(<30370..30458,30570..>30840)	Acanthamoeba castellanii str. Neff	14926704
ACA1_119170	mRNA	ACA1_119170	NW_004457724.1	31050	31782	D	ACA1_119170	join(<31050..31357,31437..>31782)	Acanthamoeba castellanii str. Neff	14926705
ACA1_119180	mRNA	ACA1_119180	NW_004457724.1	31951	34603	R	ACA1_119180	complement(join(<31951..33557,33657..34491,34568..>34603))	Acanthamoeba castellanii str. Neff	14926706
ACA1_119190	mRNA	ACA1_119190	NW_004457724.1	35055	38846	D	ACA1_119190	join(<35055..35324,35417..35921,36077..36142,36222..36283,36408..36527,36707..36835,36925..37011,37174..37341,37459..37544,37681..37981,38070..38382,38470..38675,38766..>38846)	Acanthamoeba castellanii str. Neff	14926707
ACA1_119200	mRNA	ACA1_119200	NW_004457724.1	38957	39727	R	ACA1_119200	complement(<38957..>39727)	Acanthamoeba castellanii str. Neff	14926708
ACA1_119210	mRNA	ACA1_119210	NW_004457724.1	40665	44039	R	ACA1_119210	complement(join(<40665..41292,41420..41748,41825..41945,42089..42236,42323..42373,42485..42586,42675..42936,43066..43155,43228..43373,43498..43764,43850..>44039))	Acanthamoeba castellanii str. Neff	14926709
ACA1_119220	mRNA	ACA1_119220	NW_004457724.1	44573	45356	D	ACA1_119220	join(<44573..44660,44856..44936,45016..45114,45217..>45356)	Acanthamoeba castellanii str. Neff	14926710
ACA1_119230	mRNA	ACA1_119230	NW_004457724.1	45667	48559	D	ACA1_119230	join(<45667..45724,45895..46020,46116..46247,46378..46503,46598..46717,46803..46928,47004..47129,47218..47340,47416..47532,47605..47738,47822..48362,48432..>48559)	Acanthamoeba castellanii str. Neff	14926711
ACA1_119240	mRNA	ACA1_119240	NW_004457724.1	48861	51085	D	ACA1_119240	join(<48861..48883,49111..49258,49393..49639,49769..49968,50079..50222,50328..50516,50620..50859,50963..>51085)	Acanthamoeba castellanii str. Neff	14926712
ACA1_119250	mRNA	ACA1_119250	NW_004457724.1	51290	51673	R	ACA1_119250	complement(join(<51290..51327,51409..51523,51620..>51673))	Acanthamoeba castellanii str. Neff	14926713
ACA1_119270	mRNA	ACA1_119270	NW_004457724.1	55847	57080	D	ACA1_119270	join(<55847..55895,55971..56044,56114..56150,56231..56417,56525..56600,56705..56833,56944..57036,57060..>57080)	Acanthamoeba castellanii str. Neff	14926715
ACA1_119280	mRNA	ACA1_119280	NW_004457724.1	57364	59242	R	ACA1_119280	complement(join(<57364..57507,57608..57654,57830..57963,58042..58149,58266..58795,58949..>59242))	Acanthamoeba castellanii str. Neff	14926716
ACA1_119290	mRNA	ACA1_119290	NW_004457724.1	59416	59754	R	ACA1_119290	complement(<59416..>59754)	Acanthamoeba castellanii str. Neff	14926717
ACA1_119400	mRNA	ACA1_119400	NW_004457724.1	61181	63409	D	ACA1_119400	join(<61181..61545,61697..61835,61897..62106,62179..62332,62429..62671,62748..62824,62893..62973,63084..63236,63323..>63409)	Acanthamoeba castellanii str. Neff	14926718
ACA1_119410	mRNA	ACA1_119410	NW_004457724.1	63557	64902	D	ACA1_119410	join(<63557..63718,63917..63992,64086..64174,64237..64439,64536..64745,64848..>64902)	Acanthamoeba castellanii str. Neff	14926719
ACA1_119420	mRNA	ACA1_119420	NW_004457724.1	65134	66058	R	ACA1_119420	complement(join(<65134..65811,66002..>66058))	Acanthamoeba castellanii str. Neff	14926720
ACA1_119430	mRNA	ACA1_119430	NW_004457724.1	66413	69444	D	ACA1_119430	join(<66413..66464,66598..66699,66800..67341,67478..67658,68000..68027,68038..68187,68452..68857,68956..69261,69379..>69444)	Acanthamoeba castellanii str. Neff	14926721
ACA1_119440	mRNA	ACA1_119440	NW_004457724.1	69650	72758	R	ACA1_119440	complement(join(<69650..69849,69942..70068,70154..70280,70388..70521,70650..70763,70868..70963,71098..71193,71274..71359,71442..71598,71718..71772,71868..71967,72088..72159,72291..72402,72579..>72758))	Acanthamoeba castellanii str. Neff	14926722
ACA1_119450	mRNA	ACA1_119450	NW_004457724.1	73748	77578	D	ACA1_119450	join(<73748..73835,74039..74175,74272..74424,74524..74633,74792..74977,75061..75195,75295..75399,75528..75628,75707..75840,75971..76152,76207..76404,76522..76682,76739..76985,77079..77203,77327..77424,77558..>77578)	Acanthamoeba castellanii str. Neff	14926723
ACA1_119460	mRNA	ACA1_119460	NW_004457724.1	78391	78968	D	ACA1_119460	join(<78391..78419,78506..>78968)	Acanthamoeba castellanii str. Neff	14926724
ACA1_119470	mRNA	ACA1_119470	NW_004457724.1	80438	81536	D	ACA1_119470	join(<80438..80626,80707..80784,80880..80988,81149..81212,81251..>81536)	Acanthamoeba castellanii str. Neff	14926725
ACA1_119480	mRNA	ACA1_119480	NW_004457724.1	82425	83892	D	ACA1_119480	join(<82425..83019,83123..>83892)	Acanthamoeba castellanii str. Neff	14926726
ACA1_119490	mRNA	ACA1_119490	NW_004457724.1	84135	84495	D	ACA1_119490	join(<84135..84326,84427..>84495)	Acanthamoeba castellanii str. Neff	14926727
ACA1_073830	mRNA	ACA1_073830	NW_004457722.1	197	1038	R	ACA1_073830	complement(join(<197..300,370..765,822..898,974..>1038))	Acanthamoeba castellanii str. Neff	14926698
ACA1_073840	mRNA	ACA1_073840	NW_004457722.1	1215	1427	D	ACA1_073840	<1215..>1427	Acanthamoeba castellanii str. Neff	14926682
ACA1_073950	mRNA	ACA1_073950	NW_004457722.1	6648	7010	D	ACA1_073950	join(<6648..6755,6831..>7010)	Acanthamoeba castellanii str. Neff	14926683
ACA1_073960	mRNA	ACA1_073960	NW_004457722.1	7910	9193	D	ACA1_073960	join(<7910..8033,8131..8199,8276..8397,8473..8635,8711..8869,8934..>9193)	Acanthamoeba castellanii str. Neff	14926684
ACA1_074070	mRNA	ACA1_074070	NW_004457722.1	13633	16554	R	ACA1_074070	complement(join(<13633..14457,14519..14719,14797..14908,14978..15267,15304..15812,15920..16230,16469..>16554))	Acanthamoeba castellanii str. Neff	14926685
ACA1_074080	mRNA	ACA1_074080	NW_004457722.1	17268	20058	R	ACA1_074080	complement(join(<17268..17918,17995..18109,18214..18299,18378..18489,18576..18654,18799..19752,19861..19969,19993..>20058))	Acanthamoeba castellanii str. Neff	14926686
ACA1_074090	mRNA	ACA1_074090	NW_004457722.1	21015	22273	D	ACA1_074090	join(<21015..21105,21261..21371,21558..>22273)	Acanthamoeba castellanii str. Neff	14926687
ACA1_074100	mRNA	ACA1_074100	NW_004457722.1	22578	25120	D	ACA1_074100	join(<22578..22711,22794..23801,23879..23993,24089..24174,24291..24405,24517..24613,24720..>25120)	Acanthamoeba castellanii str. Neff	14926688
ACA1_074110	mRNA	ACA1_074110	NW_004457722.1	25245	30395	R	ACA1_074110	complement(join(<25245..25398,25494..25738,25861..25988,26083..26182,26291..26556,26637..26757,26863..26973,27055..27135,27240..27318,27387..27481,27564..27656,27743..27848,27961..28106,28210..28340,28426..28684,28779..28847,28962..29066,29148..29242,29325..29384,29482..29545,29728..29861,29970..30045,30120..30152,30318..>30395))	Acanthamoeba castellanii str. Neff	14926689
ACA1_074120	mRNA	ACA1_074120	NW_004457722.1	31319	31693	D	ACA1_074120	<31319..>31693	Acanthamoeba castellanii str. Neff	14926690
ACA1_074130	mRNA	ACA1_074130	NW_004457722.1	32380	33467	D	ACA1_074130	join(<32380..32400,32421..32499,32603..32726,32808..32965,33015..33120,33185..33248,33324..>33467)	Acanthamoeba castellanii str. Neff	14926691
ACA1_074140	mRNA	ACA1_074140	NW_004457722.1	34080	36534	D	ACA1_074140	join(<34080..34149,34241..34336,34399..34599,34683..34786,34886..35012,35117..35192,35235..35369,35535..35631,35724..35824,35899..35972,36044..36154,36228..36353,36440..>36534)	Acanthamoeba castellanii str. Neff	14926692
ACA1_074150	mRNA	ACA1_074150	NW_004457722.1	36786	37476	D	ACA1_074150	join(<36786..37031,37115..37233,37332..>37476)	Acanthamoeba castellanii str. Neff	14926693
ACA1_074160	mRNA	ACA1_074160	NW_004457722.1	38310	40835	D	ACA1_074160	join(<38310..38544,38652..38774,38876..39009,39091..39260,39356..39394,39463..39532,39607..39738,39832..39955,40035..40126,40190..40254,40322..40443,40520..40672,40744..>40835)	Acanthamoeba castellanii str. Neff	14926694
ACA1_074170	mRNA	ACA1_074170	NW_004457722.1	41035	41349	R	ACA1_074170	complement(join(<41035..41124,41236..>41349))	Acanthamoeba castellanii str. Neff	14926695
ACA1_074180	mRNA	ACA1_074180	NW_004457722.1	42003	44603	D	ACA1_074180	join(<42003..42159,42283..42434,42529..42685,42770..42864,42959..43195,43292..43499,43571..43722,43787..43909,43984..44199,44269..44415,44505..>44603)	Acanthamoeba castellanii str. Neff	14926696
ACA1_074190	mRNA	ACA1_074190	NW_004457722.1	44879	45478	R	ACA1_074190	complement(join(<44879..44884,44966..>45478))	Acanthamoeba castellanii str. Neff	14926697
ACA1_004400	mRNA	ACA1_004400	NW_004457721.1	2391	3402	D	ACA1_004400	join(<2391..2537,2610..2675,2750..2983,3088..>3402)	Acanthamoeba castellanii str. Neff	14926681
ACA1_004410	mRNA	ACA1_004410	NW_004457721.1	3641	5384	D	ACA1_004410	join(<3641..3778,3893..4060,4208..4531,5082..>5384)	Acanthamoeba castellanii str. Neff	14926679
ACA1_004520	mRNA	ACA1_004520	NW_004457721.1	5577	5959	D	ACA1_004520	join(<5577..5891,5945..>5959)	Acanthamoeba castellanii str. Neff	14926680
ACA1_004630	mRNA	ACA1_004630	NW_004457721.1	7796	9847	R	ACA1_004630	complement(join(<7796..7880,7978..8164,8194..8262,8370..8645,8722..9069,9178..9227,9313..9675,9807..>9847))	Acanthamoeba castellanii str. Neff	14926676
ACA1_004640	mRNA	ACA1_004640	NW_004457721.1	10109	11606	D	ACA1_004640	join(<10109..10147,10209..10325,10442..10539,10623..10714,10834..10914,10984..11051,11172..11291,11403..>11606)	Acanthamoeba castellanii str. Neff	14926677
ACA1_004750	mRNA	ACA1_004750	NW_004457721.1	15353	16275	R	ACA1_004750	complement(join(<15353..15381,15419..15597,15720..15812,15956..>16275))	Acanthamoeba castellanii str. Neff	14926678
ACA1_306230	mRNA	ACA1_306230	NW_004457720.1	7697	8176	D	ACA1_306230	join(<7697..7804,7878..7957,8062..>8176)	Acanthamoeba castellanii str. Neff	14926674
ACA1_306340	mRNA	ACA1_306340	NW_004457720.1	14326	15876	R	ACA1_306340	complement(join(<14326..14377,14558..14628,14707..14801,14882..14903,14987..15095,15240..15309,15405..15497,15559..15664,15754..>15876))	Acanthamoeba castellanii str. Neff	14926675
ACA1_027730	mRNA	ACA1_027730	NW_004457719.1	122	1171	R	ACA1_027730	complement(join(<122..252,353..431,571..870,953..966,1003..>1171))	Acanthamoeba castellanii str. Neff	14926672
ACA1_027740	mRNA	ACA1_027740	NW_004457719.1	1844	2395	D	ACA1_027740	<1844..>2395	Acanthamoeba castellanii str. Neff	14926661
ACA1_027750	mRNA	ACA1_027750	NW_004457719.1	2781	3522	D	ACA1_027750	join(<2781..2888,2967..3267,3344..>3522)	Acanthamoeba castellanii str. Neff	14926662
ACA1_027760	mRNA	ACA1_027760	NW_004457719.1	3666	4706	R	ACA1_027760	complement(join(<3666..3740,3846..4123,4198..4214,4341..4491,4577..>4706))	Acanthamoeba castellanii str. Neff	14926663
ACA1_027770	mRNA	ACA1_027770	NW_004457719.1	5711	7193	D	ACA1_027770	join(<5711..5776,5876..6200,6401..6926,7013..>7193)	Acanthamoeba castellanii str. Neff	14926664
ACA1_027780	mRNA	ACA1_027780	NW_004457719.1	8030	17363	D	ACA1_027780	join(<8030..8117,8242..8558,8661..8790,8882..9014,9165..9625,9727..9890,10004..10118,10167..10376,10465..10533,10617..10737,10863..10967,11103..11280,11357..11458,11545..11640,11722..11837,12005..12214,12298..12420,12522..12633,12743..12977,13063..13190,13286..13357,13472..13621,13749..13923,14032..14120,14200..14664,14741..14884,14958..15026,15137..15272,15383..15622,15764..15902,15974..16490,16601..16717,16796..16893,16984..17116,17226..>17363)	Acanthamoeba castellanii str. Neff	14926665
ACA1_027790	mRNA	ACA1_027790	NW_004457719.1	17952	18995	D	ACA1_027790	join(<17952..18139,18303..18879,18963..>18995)	Acanthamoeba castellanii str. Neff	14926666
ACA1_027800	mRNA	ACA1_027800	NW_004457719.1	19689	22259	R	ACA1_027800	complement(join(<19689..20150,20219..20275,20364..20429,20513..20699,20863..21614,21742..21896,22010..>22259))	Acanthamoeba castellanii str. Neff	14926667
ACA1_027810	mRNA	ACA1_027810	NW_004457719.1	22438	26301	D	ACA1_027810	join(<22438..22635,22764..22894,22986..23154,23223..23314,23406..23496,23602..23718,23847..23984,24107..24275,24432..24520,24599..24694,24803..24936,25026..25119,25221..25305,25417..25964,26128..>26301)	Acanthamoeba castellanii str. Neff	14926668
ACA1_027820	mRNA	ACA1_027820	NW_004457719.1	26657	27031	R	ACA1_027820	complement(<26657..>27031)	Acanthamoeba castellanii str. Neff	14926669
ACA1_027830	mRNA	ACA1_027830	NW_004457719.1	27363	33127	R	ACA1_027830	complement(join(<27363..27999,28088..28841,28925..29191,29290..29496,29572..30248,30334..30557,30660..30821,30908..31003,31075..31158,31253..31378,31488..31626,31709..31857,31966..32050,32149..32233,32319..32392,32524..32603,32700..32816,32927..32976,33100..>33127))	Acanthamoeba castellanii str. Neff	14926670
ACA1_027840	mRNA	ACA1_027840	NW_004457719.1	33454	35051	R	ACA1_027840	complement(join(<33454..33552,33649..33708,33795..33902,33998..34108,34178..34270,34443..34549,34638..34720,34809..34866,34949..>35051))	Acanthamoeba castellanii str. Neff	14926671
ACA1_350360	mRNA	ACA1_350360	NW_004457717.1	6784	7413	R	ACA1_350360	complement(join(<6784..6872,7109..7306,7383..>7413))	Acanthamoeba castellanii str. Neff	14926659
ACA1_350370	mRNA	ACA1_350370	NW_004457717.1	9065	9540	D	ACA1_350370	join(<9065..9271,9409..>9540)	Acanthamoeba castellanii str. Neff	14926655
ACA1_350480	mRNA	ACA1_350480	NW_004457717.1	12032	13493	D	ACA1_350480	join(<12032..12049,12106..12237,12363..12483,12586..12781,12905..13014,13110..13204,13287..>13493)	Acanthamoeba castellanii str. Neff	14926656
ACA1_350490	mRNA	ACA1_350490	NW_004457717.1	13581	16358	R	ACA1_350490	complement(join(<13581..13700,13851..14944,15100..15198,15353..15442,15534..15769,15869..15963,16056..16132,16241..>16358))	Acanthamoeba castellanii str. Neff	14926657
ACA1_350600	mRNA	ACA1_350600	NW_004457717.1	23175	23504	D	ACA1_350600	join(<23175..23239,23330..>23504)	Acanthamoeba castellanii str. Neff	14926658
ACA1_002610	mRNA	ACA1_002610	NW_004457716.1	2806	3396	D	ACA1_002610	join(<2806..2862,2924..3043,3117..3306,3377..>3396)	Acanthamoeba castellanii str. Neff	14926654
ACA1_002620	mRNA	ACA1_002620	NW_004457716.1	3714	6285	D	ACA1_002620	join(<3714..3763,3868..4036,4133..4216,4328..4435,4654..4713,4781..4839,4932..4998,5131..5262,5388..5438,5506..5590,5681..5797,5866..5955,6056..>6285)	Acanthamoeba castellanii str. Neff	14926652
ACA1_002630	mRNA	ACA1_002630	NW_004457716.1	6489	10291	R	ACA1_002630	complement(join(<6489..6617,6716..6836,6955..7238,7334..7456,7613..7726,7852..7965,8064..8243,8343..8607,8673..9522,9617..9739,9823..>10291))	Acanthamoeba castellanii str. Neff	14926653
ACA1_099360	mRNA	ACA1_099360	NW_004457714.1	39	500	R	ACA1_099360	complement(join(<39..129,285..356,433..>500))	Acanthamoeba castellanii str. Neff	14926651
ACA1_099370	mRNA	ACA1_099370	NW_004457714.1	568	1094	R	ACA1_099370	complement(join(<568..653,789..887,1049..>1094))	Acanthamoeba castellanii str. Neff	14926643
ACA1_099480	mRNA	ACA1_099480	NW_004457714.1	1303	2642	D	ACA1_099480	join(<1303..1426,1530..1549,1626..1702,1779..1918,2038..2144,2224..2293,2380..2493,2578..>2642)	Acanthamoeba castellanii str. Neff	14926644
ACA1_099490	mRNA	ACA1_099490	NW_004457714.1	2667	3951	R	ACA1_099490	complement(join(<2667..2825,2920..3045,3164..3246,3494..3622,3692..3926,3943..>3951))	Acanthamoeba castellanii str. Neff	14926645
ACA1_099600	mRNA	ACA1_099600	NW_004457714.1	9903	10319	D	ACA1_099600	join(<9903..10035,10114..>10319)	Acanthamoeba castellanii str. Neff	14926646
ACA1_099610	mRNA	ACA1_099610	NW_004457714.1	11687	12225	R	ACA1_099610	complement(join(<11687..11892,12006..>12225))	Acanthamoeba castellanii str. Neff	14926647
ACA1_099720	mRNA	ACA1_099720	NW_004457714.1	13424	13862	D	ACA1_099720	join(<13424..13525,13602..13666,13733..>13862)	Acanthamoeba castellanii str. Neff	14926648
ACA1_099730	mRNA	ACA1_099730	NW_004457714.1	14030	14476	D	ACA1_099730	join(<14030..14087,14179..14335,14434..>14476)	Acanthamoeba castellanii str. Neff	14926649
ACA1_099740	mRNA	ACA1_099740	NW_004457714.1	18160	19478	R	ACA1_099740	complement(join(<18160..18449,18528..18722,18822..18906,18997..19101,19235..19364,19459..>19478))	Acanthamoeba castellanii str. Neff	14926650
ACA1_287210	mRNA	ACA1_287210	NW_004457712.1	1417	2465	D	ACA1_287210	join(<1417..1587,1669..1861,1947..2090,2146..2264,2343..>2465)	Acanthamoeba castellanii str. Neff	14926642
ACA1_287220	mRNA	ACA1_287220	NW_004457712.1	2516	6840	D	ACA1_287220	join(<2516..2788,2876..2963,3137..3189,3211..4394,4496..4589,4678..4738,4835..4947,5044..5192,5269..5333,5403..5565,5628..6635,6714..>6840)	Acanthamoeba castellanii str. Neff	14926084
ACA1_287230	mRNA	ACA1_287230	NW_004457712.1	7294	7849	D	ACA1_287230	join(<7294..7536,7691..>7849)	Acanthamoeba castellanii str. Neff	14926085
ACA1_287240	mRNA	ACA1_287240	NW_004457712.1	8041	9401	D	ACA1_287240	join(<8041..8200,8319..8533,9192..>9401)	Acanthamoeba castellanii str. Neff	14926086
ACA1_287350	mRNA	ACA1_287350	NW_004457712.1	9518	14389	R	ACA1_287350	complement(join(<9518..9754,9826..11705,11826..11909,12004..12095,12211..12464,12532..12717,12816..12907,13011..13195,13296..13375,13494..13600,13697..13796,13884..13931,14005..14076,14145..14287,14353..>14389))	Acanthamoeba castellanii str. Neff	14926087
ACA1_287360	mRNA	ACA1_287360	NW_004457712.1	15281	17074	R	ACA1_287360	complement(join(<15281..15432,15616..15729,15912..16133,16211..16360,16569..16651,16738..16846,17005..>17074))	Acanthamoeba castellanii str. Neff	14926088
ACA1_287370	mRNA	ACA1_287370	NW_004457712.1	17778	20810	R	ACA1_287370	complement(join(<17778..17839,17946..18021,18088..18132,18201..18361,18445..18465,18589..18792,18891..19063,19140..19290,19360..19458,19540..19738,19816..19994,20075..20192,20278..20472,20619..>20810))	Acanthamoeba castellanii str. Neff	14926089
ACA1_287380	mRNA	ACA1_287380	NW_004457712.1	21010	22432	R	ACA1_287380	complement(join(<21010..21138,21212..21276,21366..21507,21577..21651,21729..21827,21910..22299,22382..>22432))	Acanthamoeba castellanii str. Neff	14926090
ACA1_287490	mRNA	ACA1_287490	NW_004457712.1	22923	23159	R	ACA1_287490	complement(<22923..>23159)	Acanthamoeba castellanii str. Neff	14926091
ACA1_287500	mRNA	ACA1_287500	NW_004457712.1	22998	23186	D	ACA1_287500	<22998..>23186	Acanthamoeba castellanii str. Neff	14926093
ACA1_287510	mRNA	ACA1_287510	NW_004457712.1	23515	26085	R	ACA1_287510	complement(join(<23515..23781,23854..23976,24049..24175,24259..24410,24502..24651,24723..24944,25017..25170,25257..25300,25371..25462,25547..25689,25761..25928,26060..>26085))	Acanthamoeba castellanii str. Neff	14926092
ACA1_287520	mRNA	ACA1_287520	NW_004457712.1	26372	29458	R	ACA1_287520	complement(join(<26372..26800,26898..27009,27088..27155,27225..27321,27394..27486,27593..27815,27905..27986,28056..28177,28264..>29458))	Acanthamoeba castellanii str. Neff	14926094
ACA1_287530	mRNA	ACA1_287530	NW_004457712.1	30114	31486	R	ACA1_287530	complement(join(<30114..31363,31429..>31486))	Acanthamoeba castellanii str. Neff	14926095
ACA1_287540	mRNA	ACA1_287540	NW_004457712.1	31963	33220	R	ACA1_287540	complement(join(<31963..32133,32205..32340,32430..>33220))	Acanthamoeba castellanii str. Neff	14926096
ACA1_287550	mRNA	ACA1_287550	NW_004457712.1	33353	36752	R	ACA1_287550	complement(join(<33353..33463,33553..33628,33704..33802,33889..33981,34051..34183,34271..34385,34473..34542,34611..34731,34833..35010,35088..35468,35663..35713,36084..>36752))	Acanthamoeba castellanii str. Neff	14926097
ACA1_287560	mRNA	ACA1_287560	NW_004457712.1	37053	37574	D	ACA1_287560	join(<37053..37220,37314..>37574)	Acanthamoeba castellanii str. Neff	14926098
ACA1_287570	mRNA	ACA1_287570	NW_004457712.1	37708	39557	D	ACA1_287570	join(<37708..38077,38166..38251,38328..38466,38544..38572,38635..38724,38822..38851,38913..38995,39021..39090,39165..>39557)	Acanthamoeba castellanii str. Neff	14926099
ACA1_287580	mRNA	ACA1_287580	NW_004457712.1	39726	40685	D	ACA1_287580	join(<39726..40182,40390..>40685)	Acanthamoeba castellanii str. Neff	14926100
ACA1_287590	mRNA	ACA1_287590	NW_004457712.1	41293	42323	D	ACA1_287590	join(<41293..41331,41397..41662,41752..41942,42022..>42323)	Acanthamoeba castellanii str. Neff	14926101
ACA1_287600	mRNA	ACA1_287600	NW_004457712.1	44872	46219	R	ACA1_287600	complement(join(<44872..45702,45852..46044,46125..>46219))	Acanthamoeba castellanii str. Neff	14926102
ACA1_287610	mRNA	ACA1_287610	NW_004457712.1	47513	48978	D	ACA1_287610	join(<47513..47607,47717..47851,48063..>48978)	Acanthamoeba castellanii str. Neff	14926103
ACA1_287620	mRNA	ACA1_287620	NW_004457712.1	49948	50427	D	ACA1_287620	join(<49948..50149,50222..50350,50384..>50427)	Acanthamoeba castellanii str. Neff	14926104
ACA1_287630	mRNA	ACA1_287630	NW_004457712.1	50627	52168	D	ACA1_287630	join(<50627..50742,50816..50843,51175..51216,51304..51401,51459..51561,51646..51885,51966..52026,52098..>52168)	Acanthamoeba castellanii str. Neff	14926105
ACA1_287640	mRNA	ACA1_287640	NW_004457712.1	52268	53934	R	ACA1_287640	complement(join(<52268..52604,52697..>53934))	Acanthamoeba castellanii str. Neff	14926106
ACA1_287650	mRNA	ACA1_287650	NW_004457712.1	54134	55891	D	ACA1_287650	join(<54134..54312,54435..55021,55135..55335,55449..>55891)	Acanthamoeba castellanii str. Neff	14926107
ACA1_287660	mRNA	ACA1_287660	NW_004457712.1	56103	57836	D	ACA1_287660	join(<56103..56448,56655..56714,56804..56863,56948..57007,57074..57133,57199..57258,57336..57395,57459..57518,57721..>57836)	Acanthamoeba castellanii str. Neff	14926108
ACA1_287680	mRNA	ACA1_287680	NW_004457712.1	62749	63406	D	ACA1_287680	join(<62749..62819,62878..62980,63062..63193,63254..>63406)	Acanthamoeba castellanii str. Neff	14926110
ACA1_287700	mRNA	ACA1_287700	NW_004457712.1	64981	65586	D	ACA1_287700	<64981..>65586	Acanthamoeba castellanii str. Neff	14926112
ACA1_287710	mRNA	ACA1_287710	NW_004457712.1	65799	67145	D	ACA1_287710	join(<65799..65910,65974..66065,66127..66234,66303..66386,66474..66562,66756..66846,66907..66940,67012..>67145)	Acanthamoeba castellanii str. Neff	14926113
ACA1_287720	mRNA	ACA1_287720	NW_004457712.1	67171	67970	R	ACA1_287720	complement(join(<67171..67279,67349..67433,67507..67672,67736..67808,67864..>67970))	Acanthamoeba castellanii str. Neff	14926114
ACA1_287730	mRNA	ACA1_287730	NW_004457712.1	68112	70469	R	ACA1_287730	complement(join(<68112..68288,68375..68487,68573..68719,68790..68899,68986..69062,69167..69272,69354..69654,69754..69846,69953..70067,70134..>70469))	Acanthamoeba castellanii str. Neff	14926115
ACA1_287740	mRNA	ACA1_287740	NW_004457712.1	70720	71310	R	ACA1_287740	complement(join(<70720..70746,70805..70899,70972..71083,71146..>71310))	Acanthamoeba castellanii str. Neff	14926116
ACA1_287750	mRNA	ACA1_287750	NW_004457712.1	71454	72267	D	ACA1_287750	join(<71454..71655,71724..71779,71872..71923,71991..72065,72134..>72267)	Acanthamoeba castellanii str. Neff	14926117
ACA1_287760	mRNA	ACA1_287760	NW_004457712.1	72317	73188	R	ACA1_287760	complement(join(<72317..72487,72579..72663,72738..72786,72852..72896,72959..73091,73156..>73188))	Acanthamoeba castellanii str. Neff	14926118
ACA1_287770	mRNA	ACA1_287770	NW_004457712.1	73820	74836	R	ACA1_287770	complement(join(<73820..73990,74055..74117,74285..74410,74581..74680,74733..>74836))	Acanthamoeba castellanii str. Neff	14926119
ACA1_287780	mRNA	ACA1_287780	NW_004457712.1	75471	78045	D	ACA1_287780	join(<75471..76457,76555..76671,76764..76856,76945..77066,77165..77263,77340..77576,77649..77801,77868..>78045)	Acanthamoeba castellanii str. Neff	14926120
ACA1_287790	mRNA	ACA1_287790	NW_004457712.1	79189	81052	R	ACA1_287790	complement(join(<79189..79382,79615..79642,79718..79811,79882..79994,80086..80215,80304..80419,80538..80658,80737..80807,80864..>81052))	Acanthamoeba castellanii str. Neff	14926121
ACA1_287800	mRNA	ACA1_287800	NW_004457712.1	81241	83089	R	ACA1_287800	complement(join(<81241..81909,82056..82292,82369..82485,82557..83014,83059..>83089))	Acanthamoeba castellanii str. Neff	14926122
ACA1_287810	mRNA	ACA1_287810	NW_004457712.1	84006	85612	D	ACA1_287810	join(<84006..84082,84166..84248,84328..84448,84575..84712,84818..84899,85019..85064,85138..85211,85324..85404,85502..>85612)	Acanthamoeba castellanii str. Neff	14926123
ACA1_287820	mRNA	ACA1_287820	NW_004457712.1	86359	90069	D	ACA1_287820	join(<86359..86411,86509..86626,86815..86916,86990..87080,87185..87400,87567..87740,87843..88108,88205..88271,88362..88526,88599..88714,88801..89001,89076..89234,89315..89416,89474..89554,89754..89837,89947..>90069)	Acanthamoeba castellanii str. Neff	14926124
ACA1_287830	mRNA	ACA1_287830	NW_004457712.1	90255	91532	R	ACA1_287830	complement(join(<90255..91116,91184..91318,91384..>91532))	Acanthamoeba castellanii str. Neff	14926125
ACA1_287840	mRNA	ACA1_287840	NW_004457712.1	92019	93761	R	ACA1_287840	complement(join(<92019..92969,93212..93350,93590..93630,93726..>93761))	Acanthamoeba castellanii str. Neff	14926126
ACA1_287850	mRNA	ACA1_287850	NW_004457712.1	94396	97580	R	ACA1_287850	complement(join(<94396..94593,94722..94819,94894..95270,95345..95661,95726..95797,95883..95936,95973..96149,96241..96448,96522..96594,96670..96746,96817..97004,97086..>97580))	Acanthamoeba castellanii str. Neff	14926127
ACA1_287860	mRNA	ACA1_287860	NW_004457712.1	98124	107886	D	ACA1_287860	join(<98124..98491,98593..98806,98894..99044,99132..99522,99591..99618,99631..99739,99815..100056,100138..100423,100499..100833,100907..101002,101081..101287,101378..101545,101781..101925,101997..103640,103727..103924,104001..104362,104436..104510,104588..104736,104828..105020,105116..105280,105357..105515,105585..105894,105996..106138,106229..106342,106434..106715,106895..107199,107302..107425,107532..107669,107758..>107886)	Acanthamoeba castellanii str. Neff	14926128
ACA1_287870	mRNA	ACA1_287870	NW_004457712.1	108325	113540	D	ACA1_287870	join(<108325..108388,108424..108430,108513..108586,108691..108812,108917..109003,109116..109227,109339..109398,109476..109539,109633..109705,109878..109997,110111..110221,110390..111417,111441..111519,111936..112115,112238..112376,112481..112568,112653..112725,112805..112846,112944..113102,113181..113264,113355..>113540)	Acanthamoeba castellanii str. Neff	14926129
ACA1_287880	mRNA	ACA1_287880	NW_004457712.1	113699	116420	R	ACA1_287880	complement(join(<113699..114187,114266..114368,114440..114591,114657..114740,114822..115006,115115..115251,115342..115474,115695..115807,115888..115957,116087..116224,116297..>116420))	Acanthamoeba castellanii str. Neff	14926130
ACA1_287890	mRNA	ACA1_287890	NW_004457712.1	117555	119878	R	ACA1_287890	complement(join(<117555..117994,118068..118284,118365..119080,119158..119514,119592..119652,119738..>119878))	Acanthamoeba castellanii str. Neff	14926131
ACA1_287900	mRNA	ACA1_287900	NW_004457712.1	119999	122254	R	ACA1_287900	complement(join(<119999..120424,120589..120691,120770..120897,120984..121055,121153..121211,121310..121435,121520..121656,121720..121852,121926..121955,122034..122140,122226..>122254))	Acanthamoeba castellanii str. Neff	14926132
ACA1_287910	mRNA	ACA1_287910	NW_004457712.1	123738	125061	D	ACA1_287910	join(<123738..123785,124004..124216,124328..124430,124501..124576,124647..>125061)	Acanthamoeba castellanii str. Neff	14926133
ACA1_287920	mRNA	ACA1_287920	NW_004457712.1	125446	127460	R	ACA1_287920	complement(join(<125446..125484,125556..125694,125784..125965,126071..126338,126425..126705,126846..>127460))	Acanthamoeba castellanii str. Neff	14926134
ACA1_287930	mRNA	ACA1_287930	NW_004457712.1	127629	127955	D	ACA1_287930	join(<127629..127688,127809..>127955)	Acanthamoeba castellanii str. Neff	14926135
ACA1_287940	mRNA	ACA1_287940	NW_004457712.1	128278	131274	R	ACA1_287940	complement(join(<128278..128486,128580..128708,128799..128931,129054..129434,129521..129837,129915..130194,130290..130471,130561..130633,130744..131074,131192..>131274))	Acanthamoeba castellanii str. Neff	14926136
ACA1_287950	mRNA	ACA1_287950	NW_004457712.1	131575	132490	R	ACA1_287950	complement(join(<131575..131726,131838..132024,132104..132218,132314..132374,132487..>132490))	Acanthamoeba castellanii str. Neff	14926137
ACA1_287960	mRNA	ACA1_287960	NW_004457712.1	132589	134339	R	ACA1_287960	complement(join(<132589..132896,132975..133181,133259..133287,133417..133516,133579..133699,133776..133903,133971..134079,134161..134226,134310..>134339))	Acanthamoeba castellanii str. Neff	14926138
ACA1_287970	mRNA	ACA1_287970	NW_004457712.1	134947	137397	D	ACA1_287970	join(<134947..135202,135286..135301,135433..135486,135652..135687,135825..135918,136022..136161,136237..136383,136418..136550,136626..136718,136789..136921,137004..137080,137158..137226,137299..>137397)	Acanthamoeba castellanii str. Neff	14926139
ACA1_287980	mRNA	ACA1_287980	NW_004457712.1	137826	140947	D	ACA1_287980	join(<137826..138398,138473..138528,138539..138689,138762..138807,138876..139386,139478..139513,139579..139876,139948..140160,140246..>140947)	Acanthamoeba castellanii str. Neff	14926140
ACA1_287990	mRNA	ACA1_287990	NW_004457712.1	141254	142218	D	ACA1_287990	join(<141254..141494,141581..>142218)	Acanthamoeba castellanii str. Neff	14926141
ACA1_288000	mRNA	ACA1_288000	NW_004457712.1	142729	144673	D	ACA1_288000	join(<142729..142851,142972..143086,143144..143297,143386..143573,143672..143940,144053..144396,144496..>144673)	Acanthamoeba castellanii str. Neff	14926142
ACA1_288010	mRNA	ACA1_288010	NW_004457712.1	144845	146274	R	ACA1_288010	complement(join(<144845..145031,145102..145177,145253..145378,145660..145739,145821..145953,146022..>146274))	Acanthamoeba castellanii str. Neff	14926143
ACA1_288020	mRNA	ACA1_288020	NW_004457712.1	146422	147139	R	ACA1_288020	complement(join(<146422..146799,146855..>147139))	Acanthamoeba castellanii str. Neff	14926144
ACA1_288030	mRNA	ACA1_288030	NW_004457712.1	149238	149837	D	ACA1_288030	join(<149238..149469,149538..149611,149724..>149837)	Acanthamoeba castellanii str. Neff	14926145
ACA1_288040	mRNA	ACA1_288040	NW_004457712.1	150062	151378	R	ACA1_288040	complement(join(<150062..150991,151119..151204,151294..>151378))	Acanthamoeba castellanii str. Neff	14926146
ACA1_288050	mRNA	ACA1_288050	NW_004457712.1	152000	153175	D	ACA1_288050	join(<152000..152026,152088..152208,152278..152483,152583..152740,152816..152928,152991..>153175)	Acanthamoeba castellanii str. Neff	14926147
ACA1_288160	mRNA	ACA1_288160	NW_004457712.1	154022	154406	R	ACA1_288160	complement(join(<154022..154213,154380..>154406))	Acanthamoeba castellanii str. Neff	14926148
ACA1_288270	mRNA	ACA1_288270	NW_004457712.1	156112	156659	D	ACA1_288270	join(<156112..156604,156649..>156659)	Acanthamoeba castellanii str. Neff	14926149
ACA1_288280	mRNA	ACA1_288280	NW_004457712.1	159544	160101	D	ACA1_288280	join(<159544..159659,159738..159847,160043..>160101)	Acanthamoeba castellanii str. Neff	14926150
ACA1_288290	mRNA	ACA1_288290	NW_004457712.1	160269	162266	D	ACA1_288290	join(<160269..160883,160973..161048,161129..161245,161302..161733,161971..162032,162117..>162266)	Acanthamoeba castellanii str. Neff	14926151
ACA1_288300	mRNA	ACA1_288300	NW_004457712.1	162701	166606	D	ACA1_288300	join(<162701..162922,163066..165552,165620..>166606)	Acanthamoeba castellanii str. Neff	14926152
ACA1_288310	mRNA	ACA1_288310	NW_004457712.1	166697	167847	R	ACA1_288310	complement(join(<166697..166872,166973..167108,167164..167387,167511..167686,167837..>167847))	Acanthamoeba castellanii str. Neff	14926153
ACA1_288320	mRNA	ACA1_288320	NW_004457712.1	167928	170079	D	ACA1_288320	join(<167928..168158,168299..168703,168781..168929,169013..169113,169204..169343,169427..169555,169637..169795,169903..>170079)	Acanthamoeba castellanii str. Neff	14926154
ACA1_288330	mRNA	ACA1_288330	NW_004457712.1	170290	171197	D	ACA1_288330	join(<170290..170465,170550..170677,170771..170884,170979..171034,171099..>171197)	Acanthamoeba castellanii str. Neff	14926155
ACA1_288340	mRNA	ACA1_288340	NW_004457712.1	171532	174391	D	ACA1_288340	join(<171532..171753,171837..172025,172112..172450,172530..172731,172799..172872,172942..173109,173209..173430,173499..173669,173772..173904,173985..174113,174183..>174391)	Acanthamoeba castellanii str. Neff	14926156
ACA1_288350	mRNA	ACA1_288350	NW_004457712.1	174543	175776	R	ACA1_288350	complement(join(<174543..175616,175684..>175776))	Acanthamoeba castellanii str. Neff	14926157
ACA1_288360	mRNA	ACA1_288360	NW_004457712.1	176272	177613	D	ACA1_288360	join(<176272..176287,176380..176577,176593..176998,177073..>177613)	Acanthamoeba castellanii str. Neff	14926158
ACA1_288370	mRNA	ACA1_288370	NW_004457712.1	178238	180714	D	ACA1_288370	join(<178238..178379,178539..178598,178676..178824,178898..179000,179094..179314,179408..179477,179571..179716,179802..179921,180070..>180714)	Acanthamoeba castellanii str. Neff	14926159
ACA1_288380	mRNA	ACA1_288380	NW_004457712.1	181003	187544	D	ACA1_288380	join(<181003..181364,181477..181630,181707..181826,181910..181979,182103..182380,182468..182594,182690..182778,182865..183028,183129..183330,183380..183885,183971..184109,184178..184319,184408..184551,184641..184755,184858..184937,185005..185170,185250..185459,185558..185673,185761..185949,186038..186163,186264..186515,186591..186699,186779..186910,186994..187115,187186..>187544)	Acanthamoeba castellanii str. Neff	14926160
ACA1_288390	mRNA	ACA1_288390	NW_004457712.1	187609	193867	R	ACA1_288390	complement(join(<187609..188233,188339..188483,188570..188674,188743..189106,189193..189360,189463..189590,189707..189839,189932..190054,190149..190270,190345..190468,190554..190635,190745..190887,190989..191057,191143..191274,191380..191495,191584..192046,192154..192366,192421..192629,192722..192970,193061..193157,193247..193620,193705..>193867))	Acanthamoeba castellanii str. Neff	14926161
ACA1_288400	mRNA	ACA1_288400	NW_004457712.1	194868	198980	D	ACA1_288400	join(<194868..195037,195153..195263,195332..195455,195529..195733,195817..195996,196067..196388,196465..196543,196641..196756,196847..197039,197121..197202,197310..197424,197475..197545,197640..197890,197989..198091,198170..198258,198343..198444,198526..198657,198753..>198980)	Acanthamoeba castellanii str. Neff	14926162
ACA1_288410	mRNA	ACA1_288410	NW_004457712.1	200034	202856	D	ACA1_288410	join(<200034..200343,200436..200593,200670..200753,200823..200921,201001..201108,201184..201260,201349..201526,201598..201738,201814..201873,201974..202130,202213..202302,202384..202481,202542..>202856)	Acanthamoeba castellanii str. Neff	14926163
ACA1_288420	mRNA	ACA1_288420	NW_004457712.1	203138	204077	R	ACA1_288420	complement(join(<203138..203560,203652..>204077))	Acanthamoeba castellanii str. Neff	14926164
ACA1_288430	mRNA	ACA1_288430	NW_004457712.1	204710	206083	R	ACA1_288430	complement(join(<204710..204862,204979..205072,205172..205323,205409..205575,205637..205785,205883..205966,206037..>206083))	Acanthamoeba castellanii str. Neff	14926165
ACA1_288440	mRNA	ACA1_288440	NW_004457712.1	206466	207390	R	ACA1_288440	complement(join(<206466..206621,206704..206799,206861..206968,207029..207145,207197..207268,207334..>207390))	Acanthamoeba castellanii str. Neff	14926166
ACA1_288450	mRNA	ACA1_288450	NW_004457712.1	209232	210138	R	ACA1_288450	complement(join(<209232..209311,209430..209523,209595..209702,209923..>210138))	Acanthamoeba castellanii str. Neff	14926167
ACA1_288460	mRNA	ACA1_288460	NW_004457712.1	210437	211522	R	ACA1_288460	complement(join(<210437..211280,211341..>211522))	Acanthamoeba castellanii str. Neff	14926168
ACA1_288470	mRNA	ACA1_288470	NW_004457712.1	212123	220876	D	ACA1_288470	join(<212123..212302,212387..212696,212759..212860,212930..213042,213116..213571,213604..213778,213853..213951,214016..214110,214272..214342,214408..214512,214576..214678,214747..214846,214909..215029,215095..215189,215259..215480,215565..215759,215830..215977,216065..216530,216590..216733,216813..216919,217004..217175,217243..217309,217410..217527,217749..217838,217902..218034,218105..218209,218275..218404,218475..218655,218739..218910,218981..219145,219228..219325,219386..219529,219604..219700,219795..219905,219972..220153,220285..220816,220835..>220876)	Acanthamoeba castellanii str. Neff	14926169
ACA1_288480	mRNA	ACA1_288480	NW_004457712.1	220951	221811	D	ACA1_288480	join(<220951..220995,221098..221220,221293..>221811)	Acanthamoeba castellanii str. Neff	14926170
ACA1_288490	mRNA	ACA1_288490	NW_004457712.1	222109	222684	R	ACA1_288490	complement(join(<222109..222129,222161..222288,222375..>222684))	Acanthamoeba castellanii str. Neff	14926171
ACA1_288500	mRNA	ACA1_288500	NW_004457712.1	222972	224770	D	ACA1_288500	join(<222972..223134,223274..224094,224186..224404,224500..224612,224683..>224770)	Acanthamoeba castellanii str. Neff	14926172
ACA1_288510	mRNA	ACA1_288510	NW_004457712.1	226696	232672	D	ACA1_288510	join(<226696..227160,227226..227494,227639..228020,228089..228225,228333..228495,228604..228813,228900..229166,229236..229524,229646..229998,230130..230669,230787..230883,230977..231202,231295..231410,231546..231806,231894..>232672)	Acanthamoeba castellanii str. Neff	14926173
ACA1_288520	mRNA	ACA1_288520	NW_004457712.1	232992	234427	R	ACA1_288520	complement(join(<232992..233202,233299..233362,233515..233895,233973..234243,234314..>234427))	Acanthamoeba castellanii str. Neff	14926174
ACA1_288530	mRNA	ACA1_288530	NW_004457712.1	234558	235477	D	ACA1_288530	join(<234558..234849,234975..235067,235139..235300,235395..>235477)	Acanthamoeba castellanii str. Neff	14926175
ACA1_288540	mRNA	ACA1_288540	NW_004457712.1	235619	238165	R	ACA1_288540	complement(join(<235619..235865,235966..236206,236295..236366,236467..236655,236732..236882,236959..237152,237241..237317,237435..237673,237746..>238165))	Acanthamoeba castellanii str. Neff	14926176
ACA1_288550	mRNA	ACA1_288550	NW_004457712.1	238393	239308	R	ACA1_288550	complement(join(<238393..238417,238521..238634,238703..238829,238859..238946,239090..>239308))	Acanthamoeba castellanii str. Neff	14926177
ACA1_288560	mRNA	ACA1_288560	NW_004457712.1	239325	242233	R	ACA1_288560	complement(join(<239325..239766,239871..240046,240115..240998,241076..241217,241455..241572,241642..241793,241887..242140,242215..>242233))	Acanthamoeba castellanii str. Neff	14926178
ACA1_288570	mRNA	ACA1_288570	NW_004457712.1	244088	244929	R	ACA1_288570	complement(join(<244088..244147,244219..244299,244411..244472,244544..244682,244795..>244929))	Acanthamoeba castellanii str. Neff	14926179
ACA1_288580	mRNA	ACA1_288580	NW_004457712.1	245382	246371	D	ACA1_288580	join(<245382..245477,245550..245599,245665..245788,246021..>246371)	Acanthamoeba castellanii str. Neff	14926180
ACA1_288590	mRNA	ACA1_288590	NW_004457712.1	246517	247536	D	ACA1_288590	join(<246517..246589,246758..246855,246932..247035,247103..247151,247244..247308,247389..>247536)	Acanthamoeba castellanii str. Neff	14926181
ACA1_288600	mRNA	ACA1_288600	NW_004457712.1	247645	248856	D	ACA1_288600	join(<247645..247835,247909..248522,248614..248717,248803..>248856)	Acanthamoeba castellanii str. Neff	14926182
ACA1_288610	mRNA	ACA1_288610	NW_004457712.1	249045	250642	R	ACA1_288610	complement(join(<249045..249150,249236..249396,249522..249798,249906..250129,250202..250591,250628..>250642))	Acanthamoeba castellanii str. Neff	14926183
ACA1_288620	mRNA	ACA1_288620	NW_004457712.1	250813	252642	R	ACA1_288620	complement(join(<250813..251051,251141..251668,251734..251844,251958..>252642))	Acanthamoeba castellanii str. Neff	14926184
ACA1_288630	mRNA	ACA1_288630	NW_004457712.1	252911	253797	R	ACA1_288630	complement(join(<252911..253003,253095..253292,253379..253569,253647..>253797))	Acanthamoeba castellanii str. Neff	14926185
ACA1_288640	mRNA	ACA1_288640	NW_004457712.1	254068	254401	D	ACA1_288640	join(<254068..254248,254337..>254401)	Acanthamoeba castellanii str. Neff	14926186
ACA1_288650	mRNA	ACA1_288650	NW_004457712.1	254559	255279	R	ACA1_288650	complement(join(<254559..254723,254826..254871,254950..255028,255114..>255279))	Acanthamoeba castellanii str. Neff	14926187
ACA1_288660	mRNA	ACA1_288660	NW_004457712.1	255390	256775	D	ACA1_288660	join(<255390..255515,255596..255645,255734..255791,255842..255931,255997..256082,256186..256315,256364..256501,256623..>256775)	Acanthamoeba castellanii str. Neff	14926188
ACA1_288670	mRNA	ACA1_288670	NW_004457712.1	256871	257742	R	ACA1_288670	complement(join(<256871..256976,257048..257118,257192..257269,257365..257449,257510..257617,257690..>257742))	Acanthamoeba castellanii str. Neff	14926189
ACA1_288680	mRNA	ACA1_288680	NW_004457712.1	258103	262439	D	ACA1_288680	join(<258103..258114,258370..258593,258666..258713,258795..258922,259021..259248,259347..259432,259514..259555,259632..259711,259796..259856,259951..260021,260129..260277,260450..260544,260586..260754,260893..260967,261091..261240,261350..261479,261557..261668,261793..261923,262034..262120,262313..>262439)	Acanthamoeba castellanii str. Neff	14926190
ACA1_288690	mRNA	ACA1_288690	NW_004457712.1	262460	264684	R	ACA1_288690	complement(join(<262460..262718,262796..262921,263012..263304,263364..263476,263557..263674,263779..>264684))	Acanthamoeba castellanii str. Neff	14926191
ACA1_288700	mRNA	ACA1_288700	NW_004457712.1	264796	267331	D	ACA1_288700	join(<264796..265279,265363..266141,266220..266303,266372..266570,266760..266869,266951..267043,267143..>267331)	Acanthamoeba castellanii str. Neff	14926192
ACA1_288710	mRNA	ACA1_288710	NW_004457712.1	267540	270362	D	ACA1_288710	join(<267540..267601,267685..267796,267891..267965,268063..268218,268274..268356,268433..268618,268696..269206,269315..269357,269466..269645,269726..270083,270185..>270362)	Acanthamoeba castellanii str. Neff	14926193
ACA1_288720	mRNA	ACA1_288720	NW_004457712.1	270428	271861	R	ACA1_288720	complement(join(<270428..270561,270635..270837,270912..271044,271145..271226,271296..271558,271690..>271861))	Acanthamoeba castellanii str. Neff	14926194
ACA1_288730	mRNA	ACA1_288730	NW_004457712.1	272049	274632	R	ACA1_288730	complement(join(<272049..272348,272449..272527,272594..272630,272720..272792,272880..273046,273131..273290,273391..273728,273865..274016,274097..274190,274301..274388,274558..>274632))	Acanthamoeba castellanii str. Neff	14926195
ACA1_288740	mRNA	ACA1_288740	NW_004457712.1	274917	276400	R	ACA1_288740	complement(join(<274917..275029,275118..275289,275346..275410,275498..275606,275686..275734,275822..275902,275998..276157,276253..>276400))	Acanthamoeba castellanii str. Neff	14926196
ACA1_288750	mRNA	ACA1_288750	NW_004457712.1	276579	278536	D	ACA1_288750	join(<276579..276705,276804..276928,277000..277093,277181..277347,277419..277902,277983..278147,278238..>278536)	Acanthamoeba castellanii str. Neff	14926197
ACA1_288760	mRNA	ACA1_288760	NW_004457712.1	278621	280252	R	ACA1_288760	complement(join(<278621..278768,278843..279138,279212..279580,279650..>280252))	Acanthamoeba castellanii str. Neff	14926198
ACA1_288770	mRNA	ACA1_288770	NW_004457712.1	282288	286606	R	ACA1_288770	complement(join(<282288..282499,282607..282771,282868..282935,283010..283181,283298..283384,283462..283597,283692..283798,283891..283973,284053..284213,284269..284378,284451..284738,284819..284914,285006..285181,285273..285414,285506..285613,285694..285800,285878..286035,286224..286295,286419..286547,286586..>286606))	Acanthamoeba castellanii str. Neff	14926199
ACA1_288780	mRNA	ACA1_288780	NW_004457712.1	287009	288080	D	ACA1_288780	join(<287009..287032,287087..287131,287246..287306,287425..287651,287709..287822,287862..>288080)	Acanthamoeba castellanii str. Neff	14926200
ACA1_288790	mRNA	ACA1_288790	NW_004457712.1	288126	288541	R	ACA1_288790	complement(join(<288126..288215,288398..>288541))	Acanthamoeba castellanii str. Neff	14926201
ACA1_288800	mRNA	ACA1_288800	NW_004457712.1	289355	291936	D	ACA1_288800	join(<289355..289412,289542..289687,289800..289939,290009..290149,290239..290389,290477..290540,290636..290794,290901..290971,291142..291216,291296..291477,291630..291693,291808..>291936)	Acanthamoeba castellanii str. Neff	14926202
ACA1_288810	mRNA	ACA1_288810	NW_004457712.1	292013	303072	R	ACA1_288810	complement(join(<292013..292516,292615..292757,292875..293136,293285..293464,293548..293974,294101..294296,294425..294512,294616..294758,294852..294954,295037..295110,295209..295544,295649..295819,295873..295993,296072..296219,296316..296407,296492..296544,296615..296913,297007..297089,297171..297504,297602..297709,297806..297911,297995..298105,298184..298275,298370..298495,298565..298963,299043..299733,299817..299966,300119..300250,300322..300402,300476..300548,300624..300952,301063..301476,301569..301771,301831..302021,302119..302309,302413..302601,302767..302908,303055..>303072))	Acanthamoeba castellanii str. Neff	14926203
ACA1_288820	mRNA	ACA1_288820	NW_004457712.1	303536	304100	D	ACA1_288820	join(<303536..303716,303811..>304100)	Acanthamoeba castellanii str. Neff	14926204
ACA1_288830	mRNA	ACA1_288830	NW_004457712.1	304260	306356	R	ACA1_288830	complement(join(<304260..305087,305170..305415,305508..>306356))	Acanthamoeba castellanii str. Neff	14926205
ACA1_288840	mRNA	ACA1_288840	NW_004457712.1	307099	308450	R	ACA1_288840	complement(join(<307099..307197,307278..307404,307478..307554,307641..307721,307789..307851,308053..308080,308248..>308450))	Acanthamoeba castellanii str. Neff	14926206
ACA1_288850	mRNA	ACA1_288850	NW_004457712.1	308699	313561	R	ACA1_288850	complement(join(<308699..308851,308921..309043,309115..309274,309350..309482,309571..309678,309741..309874,309959..310074,310192..310263,310348..310412,310504..310642,310720..310814,310944..311054,311127..311294,311383..311521,311589..311756,311835..312018,312114..313111,313142..313380,313450..>313561))	Acanthamoeba castellanii str. Neff	14926207
ACA1_288860	mRNA	ACA1_288860	NW_004457712.1	313764	316054	R	ACA1_288860	complement(join(<313764..314307,314352..314409,314509..314620,314838..314891,314963..315060,315306..315386,315580..315808,315893..>316054))	Acanthamoeba castellanii str. Neff	14926208
ACA1_288870	mRNA	ACA1_288870	NW_004457712.1	316175	317500	R	ACA1_288870	complement(join(<316175..316356,316424..316570,316644..316783,316849..316888,316968..317135,317206..317265,317326..>317500))	Acanthamoeba castellanii str. Neff	14926209
ACA1_288890	mRNA	ACA1_288890	NW_004457712.1	321200	323772	D	ACA1_288890	join(<321200..321220,321291..321336,321448..321628,321740..321880,321960..322076,322160..322256,322445..322879,322968..323556,323633..>323772)	Acanthamoeba castellanii str. Neff	14926211
ACA1_288900	mRNA	ACA1_288900	NW_004457712.1	324269	325558	D	ACA1_288900	join(<324269..325357,325469..>325558)	Acanthamoeba castellanii str. Neff	14926212
ACA1_288910	mRNA	ACA1_288910	NW_004457712.1	325934	327890	D	ACA1_288910	join(<325934..326093,326182..326873,326961..>327890)	Acanthamoeba castellanii str. Neff	14926213
ACA1_288920	mRNA	ACA1_288920	NW_004457712.1	328054	328992	D	ACA1_288920	join(<328054..328057,328174..328574,328645..>328992)	Acanthamoeba castellanii str. Neff	14926214
ACA1_288930	mRNA	ACA1_288930	NW_004457712.1	329201	338216	D	ACA1_288930	join(<329201..329299,329386..329527,329614..329729,329841..329930,330025..330265,330357..330565,330654..330835,331035..331158,331238..331460,331567..331853,332132..332208,332258..332632,332759..332866,332959..333103,333229..333385,333469..333680,333774..333944,334028..334207,334285..334918,335017..335359,335501..335681,335796..336027,336106..336345,336421..336572,336700..336794,336920..>338216)	Acanthamoeba castellanii str. Neff	14926215
ACA1_289040	mRNA	ACA1_289040	NW_004457712.1	338368	342286	R	ACA1_289040	complement(join(<338368..339393,339472..339732,339818..339966,340037..340228,340305..340421,340497..340626,340720..340908,340984..341142,341220..341395,341461..341534,341607..341811,341884..342046,342116..>342286))	Acanthamoeba castellanii str. Neff	14926216
ACA1_289050	mRNA	ACA1_289050	NW_004457712.1	343273	345265	D	ACA1_289050	join(<343273..343471,343647..343828,343899..344093,344341..344506,344579..344772,344839..345031,345114..>345265)	Acanthamoeba castellanii str. Neff	14926217
ACA1_289060	mRNA	ACA1_289060	NW_004457712.1	345670	348094	D	ACA1_289060	join(<345670..345688,345763..345915,345997..346121,346201..346292,346368..346414,346486..346570,346660..346858,346884..346997,347088..347147,347249..347471,347560..347721,347817..>348094)	Acanthamoeba castellanii str. Neff	14926218
ACA1_289070	mRNA	ACA1_289070	NW_004457712.1	348226	352385	R	ACA1_289070	complement(join(<348226..348357,348447..348559,348661..348730,348903..349019,349123..349251,349343..349501,349557..349880,349968..350035,350099..350326,350398..350520,350611..350729,350829..350961,351036..351071,351370..351447,351540..351619,351709..351784,351863..352009,352086..352235,352319..>352385))	Acanthamoeba castellanii str. Neff	14926219
ACA1_289080	mRNA	ACA1_289080	NW_004457712.1	352566	353387	R	ACA1_289080	complement(join(<352566..352768,352877..>353387))	Acanthamoeba castellanii str. Neff	14926220
ACA1_289090	mRNA	ACA1_289090	NW_004457712.1	354284	357562	D	ACA1_289090	join(<354284..354713,354911..355131,355186..355554,355631..356082,356097..356371,356495..356637,356768..356896,356966..357063,357133..>357562)	Acanthamoeba castellanii str. Neff	14926221
ACA1_289100	mRNA	ACA1_289100	NW_004457712.1	357644	358957	D	ACA1_289100	join(<357644..358054,358201..358318,358409..358434,358514..358633,358844..>358957)	Acanthamoeba castellanii str. Neff	14926222
ACA1_289110	mRNA	ACA1_289110	NW_004457712.1	359105	360561	R	ACA1_289110	complement(join(<359105..359239,359328..359518,359617..359744,359857..360103,360429..>360561))	Acanthamoeba castellanii str. Neff	14926223
ACA1_289120	mRNA	ACA1_289120	NW_004457712.1	360980	361944	R	ACA1_289120	complement(join(<360980..361045,361142..361334,361493..>361944))	Acanthamoeba castellanii str. Neff	14926224
ACA1_289130	mRNA	ACA1_289130	NW_004457712.1	362521	364755	R	ACA1_289130	complement(join(<362521..363811,363860..>364755))	Acanthamoeba castellanii str. Neff	14926225
ACA1_289140	mRNA	ACA1_289140	NW_004457712.1	365608	369202	R	ACA1_289140	complement(join(<365608..365842,365918..366024,366079..366186,366278..366396,366488..366659,366730..367161,367254..367517,367545..367640,367711..367837,367915..367966,368050..368162,368258..368496,368599..368733,368987..>369202))	Acanthamoeba castellanii str. Neff	14926226
ACA1_289150	mRNA	ACA1_289150	NW_004457712.1	369534	371571	R	ACA1_289150	complement(join(<369534..369710,369811..370022,370096..370204,370273..370428,370536..370655,370720..370889,370978..371121,371181..>371571))	Acanthamoeba castellanii str. Neff	14926227
ACA1_289160	mRNA	ACA1_289160	NW_004457712.1	372379	373175	D	ACA1_289160	join(<372379..372438,372498..>373175)	Acanthamoeba castellanii str. Neff	14926228
ACA1_289170	mRNA	ACA1_289170	NW_004457712.1	373249	373939	D	ACA1_289170	join(<373249..373505,373574..373697,373760..>373939)	Acanthamoeba castellanii str. Neff	14926229
ACA1_289180	mRNA	ACA1_289180	NW_004457712.1	375204	376191	D	ACA1_289180	join(<375204..375319,375385..375530,375657..375688,375902..376054,376114..>376191)	Acanthamoeba castellanii str. Neff	14926230
ACA1_289190	mRNA	ACA1_289190	NW_004457712.1	376673	379968	D	ACA1_289190	join(<376673..376788,376853..377319,377330..377349,377367..379015,379081..379177,379240..>379968)	Acanthamoeba castellanii str. Neff	14926231
ACA1_289200	mRNA	ACA1_289200	NW_004457712.1	380079	381512	R	ACA1_289200	complement(<380079..>381512)	Acanthamoeba castellanii str. Neff	14926232
ACA1_289210	mRNA	ACA1_289210	NW_004457712.1	381847	383762	R	ACA1_289210	complement(join(<381847..381959,382220..382343,382424..382502,382597..382674,382816..382932,383002..383159,383254..383367,383438..383589,383699..>383762))	Acanthamoeba castellanii str. Neff	14926233
ACA1_289220	mRNA	ACA1_289220	NW_004457712.1	384394	388162	D	ACA1_289220	join(<384394..384408,384545..384643,384729..385031,385094..385184,385254..385489,385557..385674,385743..385882,385953..386024,386089..386155,386287..386534,386593..386685,386751..387146,387233..387373,387436..387561,387656..387733,387812..387922,387983..>388162)	Acanthamoeba castellanii str. Neff	14926234
ACA1_289230	mRNA	ACA1_289230	NW_004457712.1	389525	392612	D	ACA1_289230	join(<389525..389545,389644..389841,389920..390037,390114..390265,390288..390616,390677..390896,390975..391067,391143..391386,391459..391610,391683..391823,391891..392035,392108..392190,392255..392365,392433..>392612)	Acanthamoeba castellanii str. Neff	14926235
ACA1_289240	mRNA	ACA1_289240	NW_004457712.1	393342	394427	D	ACA1_289240	join(<393342..393460,393598..393706,393799..393891,393981..394074,394144..>394427)	Acanthamoeba castellanii str. Neff	14926236
ACA1_289250	mRNA	ACA1_289250	NW_004457712.1	394702	395878	D	ACA1_289250	join(<394702..395066,395134..395359,395449..395541,395615..>395878)	Acanthamoeba castellanii str. Neff	14926237
ACA1_289260	mRNA	ACA1_289260	NW_004457712.1	396223	397102	D	ACA1_289260	join(<396223..396300,396376..396528,396585..396662,396736..396846,396920..>397102)	Acanthamoeba castellanii str. Neff	14926238
ACA1_289280	mRNA	ACA1_289280	NW_004457712.1	402635	406720	R	ACA1_289280	complement(join(<402635..404456,404527..404997,405089..405180,405252..405344,405439..405528,405610..405693,405771..406200,406268..406433,406525..406596,406617..406662,406703..>406720))	Acanthamoeba castellanii str. Neff	14926240
ACA1_289290	mRNA	ACA1_289290	NW_004457712.1	408085	409320	R	ACA1_289290	complement(join(<408085..408113,408175..408302,408364..408469,408537..408613,408696..408769,408837..408977,409063..409145,409221..>409320))	Acanthamoeba castellanii str. Neff	14926241
ACA1_289300	mRNA	ACA1_289300	NW_004457712.1	410186	413619	D	ACA1_289300	join(<410186..410251,410317..410388,410453..410542,410679..410793,410850..410941,411019..411219,411299..412051,412112..412201,412264..412350,412422..412514,412607..412702,412763..412861,412929..412997,413103..413298,413369..413503,413573..>413619)	Acanthamoeba castellanii str. Neff	14926242
ACA1_289310	mRNA	ACA1_289310	NW_004457712.1	413894	414499	D	ACA1_289310	join(<413894..413956,414023..414132,414196..414335,414393..>414499)	Acanthamoeba castellanii str. Neff	14926243
ACA1_289320	mRNA	ACA1_289320	NW_004457712.1	414717	415756	R	ACA1_289320	complement(join(<414717..414850,414945..415041,415103..415181,415260..>415756))	Acanthamoeba castellanii str. Neff	14926244
ACA1_289330	mRNA	ACA1_289330	NW_004457712.1	416260	417658	D	ACA1_289330	join(<416260..416337,416408..416565,416645..416687,416817..417005,417047..417144,417219..417485,417625..>417658)	Acanthamoeba castellanii str. Neff	14926245
ACA1_289340	mRNA	ACA1_289340	NW_004457712.1	417666	418753	D	ACA1_289340	join(<417666..417740,417808..417965,418027..418061,418099..418236,418305..418410,418468..>418753)	Acanthamoeba castellanii str. Neff	14926246
ACA1_289350	mRNA	ACA1_289350	NW_004457712.1	418828	420653	R	ACA1_289350	complement(join(<418828..419063,419133..419221,419300..419414,419490..420182,420337..420507,420584..>420653))	Acanthamoeba castellanii str. Neff	14926247
ACA1_289360	mRNA	ACA1_289360	NW_004457712.1	421509	422466	D	ACA1_289360	join(<421509..421647,421733..421797,421885..421950,422032..422160,422254..>422466)	Acanthamoeba castellanii str. Neff	14926248
ACA1_289370	mRNA	ACA1_289370	NW_004457712.1	422910	423918	R	ACA1_289370	complement(join(<422910..423163,423233..423311,423393..423499,423579..423804,423874..>423918))	Acanthamoeba castellanii str. Neff	14926249
ACA1_289380	mRNA	ACA1_289380	NW_004457712.1	424211	427003	D	ACA1_289380	join(<424211..424339,424410..424528,424597..424678,424742..424802,424870..424951,425026..425168,425430..425638,425719..425900,425979..426102,426184..426406,426621..426637,426733..426870,426941..>427003)	Acanthamoeba castellanii str. Neff	14926250
ACA1_289590	mRNA	ACA1_289590	NW_004457712.1	427044	428357	D	ACA1_289590	join(<427044..427101,427173..427266,427330..427423,427486..427595,427663..427717,427778..427931,428014..428070,428140..428162,428271..>428357)	Acanthamoeba castellanii str. Neff	14926251
ACA1_289600	mRNA	ACA1_289600	NW_004457712.1	428405	429349	D	ACA1_289600	join(<428405..428551,428612..428707,428767..428863,428967..>429349)	Acanthamoeba castellanii str. Neff	14926252
ACA1_289610	mRNA	ACA1_289610	NW_004457712.1	429517	431282	D	ACA1_289610	join(<429517..429808,429921..430012,430085..430180,430246..430296,430364..430453,430529..430585,430674..431001,431071..>431282)	Acanthamoeba castellanii str. Neff	14926253
ACA1_289620	mRNA	ACA1_289620	NW_004457712.1	431443	431805	R	ACA1_289620	complement(<431443..>431805)	Acanthamoeba castellanii str. Neff	14926254
ACA1_289630	mRNA	ACA1_289630	NW_004457712.1	432953	433570	R	ACA1_289630	complement(<432953..>433570)	Acanthamoeba castellanii str. Neff	14926255
ACA1_289640	mRNA	ACA1_289640	NW_004457712.1	434357	436805	D	ACA1_289640	join(<434357..434394,434443..434540,434679..434798,434862..435183,435223..435446,435525..435595,435672..435768,435838..435995,436099..436224,436294..436366,436450..436614,436690..>436805)	Acanthamoeba castellanii str. Neff	14926256
ACA1_289650	mRNA	ACA1_289650	NW_004457712.1	436926	439200	D	ACA1_289650	join(<436926..436995,437068..437242,437311..437411,437488..437658,437881..438797,438880..>439200)	Acanthamoeba castellanii str. Neff	14926257
ACA1_289660	mRNA	ACA1_289660	NW_004457712.1	439282	440015	D	ACA1_289660	join(<439282..439305,439385..439399,439456..439502,439571..439742,439833..439883,439980..>440015)	Acanthamoeba castellanii str. Neff	14926258
ACA1_289670	mRNA	ACA1_289670	NW_004457712.1	440170	441482	D	ACA1_289670	join(<440170..440653,440719..441222,441289..>441482)	Acanthamoeba castellanii str. Neff	14926259
ACA1_289680	mRNA	ACA1_289680	NW_004457712.1	442044	443312	R	ACA1_289680	complement(join(<442044..442105,442182..442284,442369..442512,442589..442628,442709..442856,442931..>443312))	Acanthamoeba castellanii str. Neff	14926260
ACA1_289690	mRNA	ACA1_289690	NW_004457712.1	443379	444774	R	ACA1_289690	complement(join(<443379..443417,443589..443645,443724..443834,443902..443984,444053..444124,444205..444314,444401..444489,444569..444690,444756..>444774))	Acanthamoeba castellanii str. Neff	14926261
ACA1_289700	mRNA	ACA1_289700	NW_004457712.1	444902	445934	D	ACA1_289700	join(<444902..445111,445185..445221,445308..445417,445649..445755,445841..>445934)	Acanthamoeba castellanii str. Neff	14926262
ACA1_289710	mRNA	ACA1_289710	NW_004457712.1	445995	446849	R	ACA1_289710	complement(join(<445995..446308,446374..446499,446570..>446849))	Acanthamoeba castellanii str. Neff	14926263
ACA1_289720	mRNA	ACA1_289720	NW_004457712.1	446968	447726	D	ACA1_289720	join(<446968..447151,447214..447626,447661..>447726)	Acanthamoeba castellanii str. Neff	14926264
ACA1_289730	mRNA	ACA1_289730	NW_004457712.1	448319	452840	D	ACA1_289730	join(<448319..448985,449066..449172,449289..449442,449517..449621,449688..449803,449870..450133,450204..450244,450315..450398,450471..450591,450671..450759,450851..450952,451054..451179,451250..451460,451533..451692,451801..451926,451998..452137,452221..452360,452426..>452840)	Acanthamoeba castellanii str. Neff	14926265
ACA1_289740	mRNA	ACA1_289740	NW_004457712.1	453123	454675	D	ACA1_289740	join(<453123..453435,453536..453772,453866..453935,454020..454108,454203..454553,454578..>454675)	Acanthamoeba castellanii str. Neff	14926266
ACA1_289750	mRNA	ACA1_289750	NW_004457712.1	455007	457469	D	ACA1_289750	join(<455007..455511,455596..455835,455904..456178,456237..456537,456621..456836,456937..457093,457169..457233,457312..>457469)	Acanthamoeba castellanii str. Neff	14926267
ACA1_289760	mRNA	ACA1_289760	NW_004457712.1	457804	459926	D	ACA1_289760	join(<457804..457930,458017..458192,458266..458366,458428..459208,459291..459520,459610..459805,459888..>459926)	Acanthamoeba castellanii str. Neff	14926268
ACA1_289770	mRNA	ACA1_289770	NW_004457712.1	460256	462751	R	ACA1_289770	complement(join(<460256..460384,460501..460568,460637..460774,460879..460997,461095..461183,461283..461384,461480..461570,461673..461748,461846..461952,462098..462176,462272..462366,462510..>462751))	Acanthamoeba castellanii str. Neff	14926269
ACA1_289780	mRNA	ACA1_289780	NW_004457712.1	462859	464495	R	ACA1_289780	complement(join(<462859..462980,463058..463165,463229..463289,463385..463597,463675..463827,463896..464247,464335..>464495))	Acanthamoeba castellanii str. Neff	14926270
ACA1_289790	mRNA	ACA1_289790	NW_004457712.1	464672	466008	R	ACA1_289790	complement(join(<464672..464848,464968..>466008))	Acanthamoeba castellanii str. Neff	14926271
ACA1_289800	mRNA	ACA1_289800	NW_004457712.1	466097	468224	R	ACA1_289800	complement(join(<466097..466336,466461..466602,466663..466753,466827..466935,467018..467140,467208..467274,467348..467602,467678..467775,467856..>468224))	Acanthamoeba castellanii str. Neff	14926272
ACA1_289810	mRNA	ACA1_289810	NW_004457712.1	468375	471406	D	ACA1_289810	join(<468375..468503,468563..468661,468737..468874,468908..468943,468968..469338,469416..469733,469817..469919,470024..470185,470277..470332,470427..470569,470661..470725,470809..470931,471037..471155,471250..>471406)	Acanthamoeba castellanii str. Neff	14926273
ACA1_289820	mRNA	ACA1_289820	NW_004457712.1	471546	473975	R	ACA1_289820	complement(join(<471546..471673,471764..471937,472049..472110,472210..472275,472360..472469,472623..472727,472826..472941,473027..473131,473222..473348,473450..473852,473923..>473975))	Acanthamoeba castellanii str. Neff	14926274
ACA1_289830	mRNA	ACA1_289830	NW_004457712.1	474104	476186	D	ACA1_289830	join(<474104..474439,474503..474577,474818..474853,474922..474997,475068..475153,475228..475324,475425..475549,475745..475875,475968..476032,476095..>476186)	Acanthamoeba castellanii str. Neff	14926275
ACA1_289840	mRNA	ACA1_289840	NW_004457712.1	476293	477178	D	ACA1_289840	join(<476293..476578,476647..476746,476806..476924,477012..>477178)	Acanthamoeba castellanii str. Neff	14926276
ACA1_289850	mRNA	ACA1_289850	NW_004457712.1	477682	478530	D	ACA1_289850	join(<477682..477854,477920..478026,478097..478204,478265..478356,478486..>478530)	Acanthamoeba castellanii str. Neff	14926277
ACA1_289860	mRNA	ACA1_289860	NW_004457712.1	478699	479633	D	ACA1_289860	join(<478699..478746,478841..478914,479064..479137,479257..>479633)	Acanthamoeba castellanii str. Neff	14926278
ACA1_289870	mRNA	ACA1_289870	NW_004457712.1	480431	486820	D	ACA1_289870	join(<480431..480686,480796..480926,481056..481208,481298..481353,481457..481625,481740..481833,481925..482078,482157..482254,482334..482467,482579..482665,482757..483000,483130..483259,483337..483419,483532..483786,483903..483985,484164..484343,484439..484931,485012..485122,485202..485354,485514..485648,485729..485854,485948..486161,486277..>486820)	Acanthamoeba castellanii str. Neff	14926279
ACA1_289880	mRNA	ACA1_289880	NW_004457712.1	486919	490667	R	ACA1_289880	complement(join(<486919..487027,487070..487196,487289..487693,487793..487892,488006..488269,488390..488473,488569..488661,488764..489002,489090..489212,489341..489540,489766..490524,490624..>490667))	Acanthamoeba castellanii str. Neff	14926280
ACA1_289890	mRNA	ACA1_289890	NW_004457712.1	490795	491538	D	ACA1_289890	join(<490795..490860,490988..491120,491216..491342,491430..>491538)	Acanthamoeba castellanii str. Neff	14926281
ACA1_289900	mRNA	ACA1_289900	NW_004457712.1	491901	492901	D	ACA1_289900	join(<491901..491937,492056..492217,492332..492640,492768..>492901)	Acanthamoeba castellanii str. Neff	14926282
ACA1_289910	mRNA	ACA1_289910	NW_004457712.1	493512	494109	D	ACA1_289910	join(<493512..493520,493594..>494109)	Acanthamoeba castellanii str. Neff	14926283
ACA1_289920	mRNA	ACA1_289920	NW_004457712.1	494351	496161	D	ACA1_289920	join(<494351..494401,494473..494545,494607..494665,494735..494832,494912..494996,495077..495203,495283..495400,495470..495585,495679..495842,495914..495981,496071..>496161)	Acanthamoeba castellanii str. Neff	14926284
ACA1_289930	mRNA	ACA1_289930	NW_004457712.1	496826	497458	D	ACA1_289930	<496826..>497458	Acanthamoeba castellanii str. Neff	14926285
ACA1_289950	mRNA	ACA1_289950	NW_004457712.1	509536	513793	R	ACA1_289950	complement(join(<509536..511155,511274..511423,511538..511661,511759..512012,512107..512269,512391..>513793))	Acanthamoeba castellanii str. Neff	14926287
ACA1_289960	mRNA	ACA1_289960	NW_004457712.1	513948	514243	R	ACA1_289960	complement(join(<513948..514003,514069..>514243))	Acanthamoeba castellanii str. Neff	14926288
ACA1_289970	mRNA	ACA1_289970	NW_004457712.1	514521	517387	D	ACA1_289970	join(<514521..514563,514796..515125,515214..515400,515525..515681,515768..515881,516000..516848,516918..517050,517131..>517387)	Acanthamoeba castellanii str. Neff	14926289
ACA1_289980	mRNA	ACA1_289980	NW_004457712.1	517434	521578	R	ACA1_289980	complement(join(<517434..517508,517597..518091,518202..518376,518509..518573,518664..518751,518858..519765,519863..519909,520013..520132,520234..520303,520422..520509,520601..520767,520875..520976,521061..521208,521334..>521578))	Acanthamoeba castellanii str. Neff	14926290
ACA1_289990	mRNA	ACA1_289990	NW_004457712.1	521945	523657	D	ACA1_289990	join(<521945..522071,522210..522410,522503..522519,522708..522786,522859..523013,523122..523426,523552..>523657)	Acanthamoeba castellanii str. Neff	14926291
ACA1_290100	mRNA	ACA1_290100	NW_004457712.1	523929	525414	D	ACA1_290100	join(<523929..523969,524076..524287,524399..524496,524577..524672,524749..>525414)	Acanthamoeba castellanii str. Neff	14926292
ACA1_290110	mRNA	ACA1_290110	NW_004457712.1	525530	533382	R	ACA1_290110	complement(join(<525530..525748,525820..525989,526082..526207,526302..526578,526647..526743,526845..527014,527089..527156,527247..527387,527494..527697,527790..527919,528014..528173,528262..528416,528516..528635,528706..528837,528943..529101,529194..529457,529538..529576,529667..529774,529832..530089,530119..530249,530321..530431,530513..530669,530767..530883,530960..531119,531179..531310,531375..531665,531720..531829,531914..532062,532139..532259,532336..532450,532518..532615,532722..532841,532914..533019,533110..533228,533317..>533382))	Acanthamoeba castellanii str. Neff	14926293
ACA1_290120	mRNA	ACA1_290120	NW_004457712.1	533691	537253	D	ACA1_290120	join(<533691..534070,534142..534223,534312..534548,534617..534744,534816..534969,535064..535163,535240..535318,535385..535797,535875..535991,536071..536171,536253..536400,536481..536627,536723..536853,536960..>537253)	Acanthamoeba castellanii str. Neff	14926294
ACA1_290130	mRNA	ACA1_290130	NW_004457712.1	537431	539451	D	ACA1_290130	join(<537431..537495,537762..537830,537963..538068,538150..538251,538361..538513,538612..538735,538809..538901,538986..539039,539124..539215,539320..>539451)	Acanthamoeba castellanii str. Neff	14926295
ACA1_290140	mRNA	ACA1_290140	NW_004457712.1	539930	542906	R	ACA1_290140	complement(join(<539930..540051,540133..540245,540329..540383,540448..540651,540735..540833,540912..541029,541130..541166,541252..541328,541419..541591,541658..541923,541986..542213,542288..542430,542515..542586,542677..542754,542844..>542906))	Acanthamoeba castellanii str. Neff	14926296
ACA1_290150	mRNA	ACA1_290150	NW_004457712.1	543208	543578	R	ACA1_290150	complement(join(<543208..543311,543449..>543578))	Acanthamoeba castellanii str. Neff	14926297
ACA1_290160	mRNA	ACA1_290160	NW_004457712.1	543912	545233	D	ACA1_290160	join(<543912..544002,544103..544275,544355..544471,544552..544862,544927..545042,545139..>545233)	Acanthamoeba castellanii str. Neff	14926298
ACA1_290170	mRNA	ACA1_290170	NW_004457712.1	545610	546826	D	ACA1_290170	join(<545610..546359,546474..546588,546663..>546826)	Acanthamoeba castellanii str. Neff	14926299
ACA1_290180	mRNA	ACA1_290180	NW_004457712.1	547053	547623	D	ACA1_290180	join(<547053..547112,547177..547348,547388..>547623)	Acanthamoeba castellanii str. Neff	14926300
ACA1_290190	mRNA	ACA1_290190	NW_004457712.1	547693	548303	D	ACA1_290190	join(<547693..548007,548068..548104,548167..>548303)	Acanthamoeba castellanii str. Neff	14926301
ACA1_290200	mRNA	ACA1_290200	NW_004457712.1	548676	549800	D	ACA1_290200	join(<548676..548871,548935..549082,549197..549362,549441..549521,549600..>549800)	Acanthamoeba castellanii str. Neff	14926302
ACA1_290210	mRNA	ACA1_290210	NW_004457712.1	549824	553448	D	ACA1_290210	join(<549824..550071,550145..550273,550358..550511,550583..550807,550891..551101,551180..551365,551443..551662,551731..552046,552124..552273,552358..552498,552582..552677,552771..553166,553254..>553448)	Acanthamoeba castellanii str. Neff	14926303
ACA1_290220	mRNA	ACA1_290220	NW_004457712.1	553499	559566	D	ACA1_290220	join(<553499..553992,554087..554117,554130..554330,554403..554512,554604..554735,554840..554898,554978..555136,555227..555444,555503..555619,555730..556051,556130..556225,556305..556541,556629..557115,557216..557295,557373..557518,557614..557780,557891..558008,558085..558168,558258..558368,558483..558620,558710..558947,558999..559148,559219..559310,559441..>559566)	Acanthamoeba castellanii str. Neff	14926304
ACA1_290230	mRNA	ACA1_290230	NW_004457712.1	560060	566837	D	ACA1_290230	join(<560060..560120,560350..560647,560828..561107,561195..561351,561429..561567,561647..561909,561979..562091,562173..562250,562440..562872,562944..563091,563202..563823,563964..564249,564433..564648,564725..564856,564940..565321,565421..565563,565649..566207,566279..>566837)	Acanthamoeba castellanii str. Neff	14926305
ACA1_290240	mRNA	ACA1_290240	NW_004457712.1	567094	568356	R	ACA1_290240	complement(<567094..>568356)	Acanthamoeba castellanii str. Neff	14926306
ACA1_290250	mRNA	ACA1_290250	NW_004457712.1	568823	570430	D	ACA1_290250	join(<568823..569005,569132..569198,569269..569369,569446..569554,569649..569774,569845..569986,570068..570296,570383..>570430)	Acanthamoeba castellanii str. Neff	14926307
ACA1_290260	mRNA	ACA1_290260	NW_004457712.1	570575	571204	R	ACA1_290260	complement(<570575..>571204)	Acanthamoeba castellanii str. Neff	14926308
ACA1_290270	mRNA	ACA1_290270	NW_004457712.1	571832	574193	R	ACA1_290270	complement(join(<571832..571960,572096..572330,572396..572526,572596..572703,572769..573005,573076..573231,573298..573402,573485..573736,573801..573892,574082..>574193))	Acanthamoeba castellanii str. Neff	14926309
ACA1_290280	mRNA	ACA1_290280	NW_004457712.1	574351	578921	R	ACA1_290280	complement(join(<574351..574560,574631..574789,574869..575004,575097..575218,575299..575454,575531..575637,575704..575839,575930..576055,576111..576231,576320..576443,576528..576590,576664..576717,576920..577070,577134..577191,577259..577356,577440..577517,577592..577785,577862..577988,578065..578175,578240..578343,578422..578519,578604..578715,578828..>578921))	Acanthamoeba castellanii str. Neff	14926310
ACA1_290290	mRNA	ACA1_290290	NW_004457712.1	579215	580201	R	ACA1_290290	complement(<579215..>580201)	Acanthamoeba castellanii str. Neff	14926311
ACA1_290300	mRNA	ACA1_290300	NW_004457712.1	580604	584913	R	ACA1_290300	complement(join(<580604..581220,581313..581885,581966..582108,582224..582605,582729..582857,582966..583181,583276..583585,583687..584311,584377..584524,584595..>584913))	Acanthamoeba castellanii str. Neff	14926312
ACA1_290310	mRNA	ACA1_290310	NW_004457712.1	584922	586493	R	ACA1_290310	complement(join(<584922..585017,585087..585164,585244..585619,585705..585843,585920..586076,586147..586418,586475..>586493))	Acanthamoeba castellanii str. Neff	14926313
ACA1_290420	mRNA	ACA1_290420	NW_004457712.1	589304	590837	R	ACA1_290420	complement(join(<589304..589777,589845..590034,590123..590337,590403..590624,590688..>590837))	Acanthamoeba castellanii str. Neff	14926314
ACA1_290430	mRNA	ACA1_290430	NW_004457712.1	591101	591658	D	ACA1_290430	join(<591101..591478,591545..>591658)	Acanthamoeba castellanii str. Neff	14926315
ACA1_290440	mRNA	ACA1_290440	NW_004457712.1	591833	594337	R	ACA1_290440	complement(join(<591833..591961,592006..592119,592198..592297,592336..592407,592510..593118,593213..593300,593392..593446,593543..593728,593809..594111,594206..>594337))	Acanthamoeba castellanii str. Neff	14926316
ACA1_290450	mRNA	ACA1_290450	NW_004457712.1	594531	596580	D	ACA1_290450	join(<594531..594543,594703..594891,594981..595129,595201..595329,595413..595553,595691..595878,595969..596045,596137..596261,596365..>596580)	Acanthamoeba castellanii str. Neff	14926317
ACA1_290460	mRNA	ACA1_290460	NW_004457712.1	596816	598109	D	ACA1_290460	join(<596816..597083,597164..597365,597451..597652,597734..597783,597908..>598109)	Acanthamoeba castellanii str. Neff	14926318
ACA1_290470	mRNA	ACA1_290470	NW_004457712.1	598490	599304	R	ACA1_290470	complement(join(<598490..598580,598665..598789,598861..598901,599277..>599304))	Acanthamoeba castellanii str. Neff	14926319
ACA1_290480	mRNA	ACA1_290480	NW_004457712.1	599527	600165	D	ACA1_290480	join(<599527..599741,599825..599868,599969..>600165)	Acanthamoeba castellanii str. Neff	14926320
ACA1_290500	mRNA	ACA1_290500	NW_004457712.1	603697	606377	R	ACA1_290500	complement(join(<603697..603775,603854..603927,604031..604122,604204..604291,604510..604704,604810..604913,604992..605075,605163..605245,605486..605711,605806..605922,605984..606152,606165..606224,606315..>606377))	Acanthamoeba castellanii str. Neff	14926322
ACA1_290510	mRNA	ACA1_290510	NW_004457712.1	606728	611801	R	ACA1_290510	complement(join(<606728..606867,606946..607109,607203..607327,607397..607517,607595..607640,607725..607881,607978..608027,608107..608221,608291..608399,608471..608553,608664..608993,609092..609159,609233..609316,609395..609520,609608..609710,609790..609837,609920..610035,610142..610303,610388..610541,610818..610977,611084..611181,611374..611566,611764..>611801))	Acanthamoeba castellanii str. Neff	14926323
ACA1_290520	mRNA	ACA1_290520	NW_004457712.1	612110	616795	D	ACA1_290520	join(<612110..612184,612327..612444,612543..612605,612692..612744,612858..612960,613050..613202,613283..613366,613472..613525,613626..613699,613795..614008,614125..614171,614261..614383,614472..614648,614735..614861,614930..615075,615150..615383,615483..615564,615661..615701,615805..615931,616002..616069,616147..616222,616299..616383,616458..616641,616727..>616795)	Acanthamoeba castellanii str. Neff	14926324
ACA1_290530	mRNA	ACA1_290530	NW_004457712.1	616908	617960	R	ACA1_290530	complement(join(<616908..617498,617570..617747,617839..>617960))	Acanthamoeba castellanii str. Neff	14926325
ACA1_290540	mRNA	ACA1_290540	NW_004457712.1	618425	619555	D	ACA1_290540	join(<618425..618654,618750..618828,618969..619126,619208..619337,619451..>619555)	Acanthamoeba castellanii str. Neff	14926326
ACA1_290550	mRNA	ACA1_290550	NW_004457712.1	619933	624479	D	ACA1_290550	join(<619933..620196,620326..620427,620547..620666,620768..621021,621087..621240,621327..621418,621481..621574,621658..621735,621843..621931,622001..622076,622170..622295,622445..622583,622670..622756,622838..622926,622998..623186,623241..623354,623484..623582,623652..623732,623822..623917,624026..624325,624405..>624479)	Acanthamoeba castellanii str. Neff	14926327
ACA1_290560	mRNA	ACA1_290560	NW_004457712.1	624701	626690	D	ACA1_290560	join(<624701..625030,625176..625280,625363..625432,625543..625759,625860..625975,626052..626164,626238..626298,626372..626524,626587..>626690)	Acanthamoeba castellanii str. Neff	14926328
ACA1_290570	mRNA	ACA1_290570	NW_004457712.1	626885	627265	D	ACA1_290570	<626885..>627265	Acanthamoeba castellanii str. Neff	14926329
ACA1_290580	mRNA	ACA1_290580	NW_004457712.1	627646	629295	D	ACA1_290580	join(<627646..627666,627871..628059,628114..628305,628392..628635,628706..>629295)	Acanthamoeba castellanii str. Neff	14926330
ACA1_290590	mRNA	ACA1_290590	NW_004457712.1	629444	631507	R	ACA1_290590	complement(join(<629444..629904,630002..630206,630266..630460,630625..630693,630798..630933,631022..631126,631290..>631507))	Acanthamoeba castellanii str. Neff	14926331
ACA1_290600	mRNA	ACA1_290600	NW_004457712.1	632373	633320	D	ACA1_290600	join(<632373..633185,633288..>633320)	Acanthamoeba castellanii str. Neff	14926332
ACA1_290610	mRNA	ACA1_290610	NW_004457712.1	633284	638894	R	ACA1_290610	complement(join(<633284..633409,633515..633671,633764..633861,633963..634079,634208..634285,634396..634497,634641..634727,634834..634976,635109..635251,635365..635529,635606..635792,635874..635928,636000..636093,636187..636251,636343..636455,636526..636591,636666..637509,637588..637704,637835..637880,637955..638037,638128..638185,638325..638428,638490..638573,638676..>638894))	Acanthamoeba castellanii str. Neff	14926333
ACA1_290620	mRNA	ACA1_290620	NW_004457712.1	639045	640592	D	ACA1_290620	join(<639045..639136,639207..639321,639389..639512,639593..639706,639813..639946,640030..640075,640152..640270,640360..640480,640558..>640592)	Acanthamoeba castellanii str. Neff	14926334
ACA1_290640	mRNA	ACA1_290640	NW_004457712.1	642435	644551	R	ACA1_290640	complement(join(<642435..642636,642740..642896,642980..643066,643158..643412,643484..643622,643702..643789,643870..643948,644039..644216,644339..>644551))	Acanthamoeba castellanii str. Neff	14926336
ACA1_290650	mRNA	ACA1_290650	NW_004457712.1	644853	650539	D	ACA1_290650	join(<644853..644951,645211..645346,645419..645483,645593..645760,645852..646014,646125..646292,646369..646494,646569..647035,647138..647611,647722..647891,647988..648082,648168..648309,648400..648546,648813..650108,650227..>650539)	Acanthamoeba castellanii str. Neff	14926337
ACA1_290660	mRNA	ACA1_290660	NW_004457712.1	650834	651353	R	ACA1_290660	complement(join(<650834..651180,651260..>651353))	Acanthamoeba castellanii str. Neff	14926338
ACA1_290670	mRNA	ACA1_290670	NW_004457712.1	652163	652637	D	ACA1_290670	join(<652163..652235,652305..652376,652492..>652637)	Acanthamoeba castellanii str. Neff	14926339
ACA1_290680	mRNA	ACA1_290680	NW_004457712.1	652746	654259	R	ACA1_290680	complement(join(<652746..653813,653956..654013,654048..>654259))	Acanthamoeba castellanii str. Neff	14926340
ACA1_290690	mRNA	ACA1_290690	NW_004457712.1	654695	657361	R	ACA1_290690	complement(join(<654695..654925,655023..655187,655455..655554,655657..655791,655891..656071,656206..656337,656454..656592,656610..656717,656824..657112,657255..>657361))	Acanthamoeba castellanii str. Neff	14926341
ACA1_290700	mRNA	ACA1_290700	NW_004457712.1	657545	658468	R	ACA1_290700	complement(<657545..>658468)	Acanthamoeba castellanii str. Neff	14926342
ACA1_290710	mRNA	ACA1_290710	NW_004457712.1	659272	662069	D	ACA1_290710	join(<659272..660081,660230..660320,660427..660587,660679..660951,661071..661140,661312..661388,661484..661584,661690..661855,661953..>662069)	Acanthamoeba castellanii str. Neff	14926343
ACA1_290720	mRNA	ACA1_290720	NW_004457712.1	662225	662882	R	ACA1_290720	complement(join(<662225..662793,662858..>662882))	Acanthamoeba castellanii str. Neff	14926344
ACA1_290730	mRNA	ACA1_290730	NW_004457712.1	663859	664332	D	ACA1_290730	<663859..>664332	Acanthamoeba castellanii str. Neff	14926345
ACA1_290740	mRNA	ACA1_290740	NW_004457712.1	664723	666529	D	ACA1_290740	join(<664723..664938,665012..665137,665221..665419,665498..665545,665625..665777,665870..665970,666079..666213,666359..>666529)	Acanthamoeba castellanii str. Neff	14926346
ACA1_290750	mRNA	ACA1_290750	NW_004457712.1	666614	668889	R	ACA1_290750	complement(join(<666614..666811,666842..667378,667612..667936,668054..668196,668283..668569,668628..668706,668806..>668889))	Acanthamoeba castellanii str. Neff	14926347
ACA1_290770	mRNA	ACA1_290770	NW_004457712.1	670227	671745	R	ACA1_290770	complement(join(<670227..670308,670380..670455,670521..670562,670653..670719,670813..670860,670970..671099,671152..671250,671372..671523,671563..>671745))	Acanthamoeba castellanii str. Neff	14926349
ACA1_290780	mRNA	ACA1_290780	NW_004457712.1	672131	673768	R	ACA1_290780	complement(join(<672131..672218,672321..672396,672462..672503,672621..672687,672758..672835,673054..673128,673267..673311,673534..673620,673679..>673768))	Acanthamoeba castellanii str. Neff	14926350
ACA1_290790	mRNA	ACA1_290790	NW_004457712.1	673986	677271	R	ACA1_290790	complement(join(<673986..674331,674413..674517,674593..674722,674827..675013,675093..675254,675330..675389,675463..675602,675657..675723,675818..676093,676174..676385,676495..676615,676689..676785,676878..677053,677185..>677271))	Acanthamoeba castellanii str. Neff	14926351
ACA1_290800	mRNA	ACA1_290800	NW_004457712.1	677397	679218	R	ACA1_290800	complement(join(<677397..677728,677811..677935,678013..678137,678195..678226,678312..678396,678475..678572,678648..>679218))	Acanthamoeba castellanii str. Neff	14926352
ACA1_290810	mRNA	ACA1_290810	NW_004457712.1	679333	680335	D	ACA1_290810	join(<679333..679459,679610..679686,679796..679878,679956..680095,680187..>680335)	Acanthamoeba castellanii str. Neff	14926353
ACA1_290820	mRNA	ACA1_290820	NW_004457712.1	680352	682559	D	ACA1_290820	join(<680352..680913,681012..681150,681237..681356,681497..681732,681791..682099,682158..682385,682468..>682559)	Acanthamoeba castellanii str. Neff	14926354
ACA1_290830	mRNA	ACA1_290830	NW_004457712.1	682624	684958	R	ACA1_290830	complement(join(<682624..682800,682879..682985,683123..683284,683378..683496,683622..683728,683832..683941,684038..684214,684329..684454,684553..684667,684779..>684958))	Acanthamoeba castellanii str. Neff	14926355
ACA1_290850	mRNA	ACA1_290850	NW_004457712.1	689157	690036	R	ACA1_290850	complement(join(<689157..689456,689569..>690036))	Acanthamoeba castellanii str. Neff	14926357
ACA1_290860	mRNA	ACA1_290860	NW_004457712.1	690716	691740	R	ACA1_290860	complement(join(<690716..691042,691117..>691740))	Acanthamoeba castellanii str. Neff	14926358
ACA1_290870	mRNA	ACA1_290870	NW_004457712.1	692699	693193	D	ACA1_290870	join(<692699..693160,693182..>693193)	Acanthamoeba castellanii str. Neff	14926359
ACA1_290880	mRNA	ACA1_290880	NW_004457712.1	693446	695426	R	ACA1_290880	complement(join(<693446..693548,693661..693911,693993..694232,694304..694486,694574..694741,694841..695010,695225..>695426))	Acanthamoeba castellanii str. Neff	14926360
ACA1_290890	mRNA	ACA1_290890	NW_004457712.1	695656	696895	R	ACA1_290890	complement(join(<695656..696143,696229..696724,696815..>696895))	Acanthamoeba castellanii str. Neff	14926361
ACA1_290900	mRNA	ACA1_290900	NW_004457712.1	696994	698643	R	ACA1_290900	complement(join(<696994..697093,697205..697295,697374..697494,697590..697716,697796..>698643))	Acanthamoeba castellanii str. Neff	14926362
ACA1_290910	mRNA	ACA1_290910	NW_004457712.1	698998	700576	D	ACA1_290910	join(<698998..699135,699211..699306,699419..699451,699547..699689,699781..699931,699996..700136,700212..700314,700389..>700576)	Acanthamoeba castellanii str. Neff	14926363
ACA1_290920	mRNA	ACA1_290920	NW_004457712.1	700972	701882	D	ACA1_290920	join(<700972..701484,701571..>701882)	Acanthamoeba castellanii str. Neff	14926364
ACA1_290930	mRNA	ACA1_290930	NW_004457712.1	702579	703435	D	ACA1_290930	join(<702579..703055,703124..>703435)	Acanthamoeba castellanii str. Neff	14926365
ACA1_290940	mRNA	ACA1_290940	NW_004457712.1	704110	704901	D	ACA1_290940	join(<704110..704580,704650..>704901)	Acanthamoeba castellanii str. Neff	14926366
ACA1_290950	mRNA	ACA1_290950	NW_004457712.1	705272	707612	D	ACA1_290950	join(<705272..705453,705526..705632,705713..705805,705908..706021,706145..706285,706375..706572,706716..706810,706892..707069,707184..707303,707382..707419,707556..>707612)	Acanthamoeba castellanii str. Neff	14926367
ACA1_290960	mRNA	ACA1_290960	NW_004457712.1	707759	709371	R	ACA1_290960	complement(join(<707759..708396,708488..708588,708702..708996,709113..709206,709345..>709371))	Acanthamoeba castellanii str. Neff	14926368
ACA1_290970	mRNA	ACA1_290970	NW_004457712.1	709567	710598	R	ACA1_290970	complement(join(<709567..710215,710303..710419,710504..>710598))	Acanthamoeba castellanii str. Neff	14926369
ACA1_290980	mRNA	ACA1_290980	NW_004457712.1	710936	712545	R	ACA1_290980	complement(join(<710936..710960,710989..711114,711199..711326,711538..711707,711872..712013,712165..712283,712296..712358,712458..>712545))	Acanthamoeba castellanii str. Neff	14926370
ACA1_290990	mRNA	ACA1_290990	NW_004457712.1	713143	715176	R	ACA1_290990	complement(join(<713143..713338,713448..714713,714911..>715176))	Acanthamoeba castellanii str. Neff	14926371
ACA1_291000	mRNA	ACA1_291000	NW_004457712.1	715688	719573	D	ACA1_291000	join(<715688..716382,716457..716583,716685..716821,716923..717103,717441..717692,717771..717960,718051..718172,718268..718378,718513..718665,718831..718972,719089..719251,719348..719460,719542..>719573)	Acanthamoeba castellanii str. Neff	14926372
ACA1_291010	mRNA	ACA1_291010	NW_004457712.1	720041	720491	R	ACA1_291010	complement(join(<720041..720050,720118..>720491))	Acanthamoeba castellanii str. Neff	14926373
ACA1_291020	mRNA	ACA1_291020	NW_004457712.1	720941	722191	D	ACA1_291020	join(<720941..721111,721335..721378,721514..721629,721754..721804,721956..>722191)	Acanthamoeba castellanii str. Neff	14926374
ACA1_291030	mRNA	ACA1_291030	NW_004457712.1	722327	722749	R	ACA1_291030	complement(join(<722327..722556,722587..>722749))	Acanthamoeba castellanii str. Neff	14926375
ACA1_291040	mRNA	ACA1_291040	NW_004457712.1	724039	726400	D	ACA1_291040	join(<724039..724092,724140..724254,724341..724568,724657..724812,724916..725036,725160..725267,725375..725553,725649..>726400)	Acanthamoeba castellanii str. Neff	14926376
ACA1_291050	mRNA	ACA1_291050	NW_004457712.1	726474	730616	R	ACA1_291050	complement(join(<726474..726614,726742..727428,727559..727674,727745..728161,728265..728387,728485..728601,728669..728762,728838..729002,729142..729510,729617..729831,729929..730004,730122..730186,730276..730365,730466..>730616))	Acanthamoeba castellanii str. Neff	14926377
ACA1_291060	mRNA	ACA1_291060	NW_004457712.1	730764	731813	R	ACA1_291060	complement(join(<730764..731189,731286..731483,731579..731666,731758..>731813))	Acanthamoeba castellanii str. Neff	14926378
ACA1_291070	mRNA	ACA1_291070	NW_004457712.1	731948	732462	D	ACA1_291070	join(<731948..732020,732094..732251,732337..>732462)	Acanthamoeba castellanii str. Neff	14926379
ACA1_291080	mRNA	ACA1_291080	NW_004457712.1	732538	733768	D	ACA1_291080	join(<732538..732647,732762..732878,732959..733015,733097..733168,733496..733593,733671..>733768)	Acanthamoeba castellanii str. Neff	14926380
ACA1_291090	mRNA	ACA1_291090	NW_004457712.1	733861	735828	D	ACA1_291090	join(<733861..734033,734096..734154,734249..734333,734457..734605,734677..734799,734869..735092,735167..735244,735344..735636,735699..>735828)	Acanthamoeba castellanii str. Neff	14926381
ACA1_291100	mRNA	ACA1_291100	NW_004457712.1	736345	738254	D	ACA1_291100	join(<736345..736398,736520..736591,736658..736717,736829..736903,736994..737062,737162..737308,737381..737524,737649..737744,737823..738082,738170..>738254)	Acanthamoeba castellanii str. Neff	14926382
ACA1_291110	mRNA	ACA1_291110	NW_004457712.1	738456	740630	R	ACA1_291110	complement(join(<738456..739106,739216..740575,740611..>740630))	Acanthamoeba castellanii str. Neff	14926383
ACA1_291120	mRNA	ACA1_291120	NW_004457712.1	741568	746594	D	ACA1_291120	join(<741568..741688,741795..742045,742184..742288,742386..742508,742646..742819,742992..743081,743163..743190,743278..743408,743507..743554,743700..743945,744060..744134,744284..744419,744607..744678,744784..745084,745179..745316,745420..745453,745511..745579,745747..745878,746008..746229,746328..>746594)	Acanthamoeba castellanii str. Neff	14926384
ACA1_291330	mRNA	ACA1_291330	NW_004457712.1	746769	748479	R	ACA1_291330	complement(join(<746769..746810,746884..746951,747043..747126,747206..747328,747563..747649,747739..747832,747921..747999,748129..748216,748274..748367,748453..>748479))	Acanthamoeba castellanii str. Neff	14926385
ACA1_291340	mRNA	ACA1_291340	NW_004457712.1	749041	749747	R	ACA1_291340	complement(join(<749041..749168,749341..749374,749437..749586,749658..>749747))	Acanthamoeba castellanii str. Neff	14926386
ACA1_291350	mRNA	ACA1_291350	NW_004457712.1	750019	752079	D	ACA1_291350	join(<750019..750251,750321..751392,751503..751726,751800..>752079)	Acanthamoeba castellanii str. Neff	14926387
ACA1_291360	mRNA	ACA1_291360	NW_004457712.1	752320	752624	R	ACA1_291360	complement(join(<752320..752342,752414..>752624))	Acanthamoeba castellanii str. Neff	14926388
ACA1_291470	mRNA	ACA1_291470	NW_004457712.1	753283	754290	R	ACA1_291470	complement(join(<753283..753331,753440..753534,753616..753793,753892..753999,754069..754185,754259..>754290))	Acanthamoeba castellanii str. Neff	14926389
ACA1_291480	mRNA	ACA1_291480	NW_004457712.1	754716	756319	D	ACA1_291480	join(<754716..754878,754974..755325,755438..755772,755864..756032,756145..>756319)	Acanthamoeba castellanii str. Neff	14926390
ACA1_291490	mRNA	ACA1_291490	NW_004457712.1	756503	757775	R	ACA1_291490	complement(join(<756503..756700,756807..756872,756998..757113,757241..757341,757451..757516,757645..>757775))	Acanthamoeba castellanii str. Neff	14926391
ACA1_291500	mRNA	ACA1_291500	NW_004457712.1	758071	760886	R	ACA1_291500	complement(join(<758071..758175,758353..758568,758683..758823,758931..759160,759291..759431,759523..759663,759784..759938,760025..760111,760258..>760886))	Acanthamoeba castellanii str. Neff	14926392
ACA1_291510	mRNA	ACA1_291510	NW_004457712.1	761259	766246	D	ACA1_291510	join(<761259..762100,762225..762837,762931..763097,763193..763325,763419..763580,763660..763760,763849..764089,764171..764425,764496..764601,764937..765108,765175..765263,765337..765531,765648..765863,766044..>766246)	Acanthamoeba castellanii str. Neff	14926393
ACA1_291520	mRNA	ACA1_291520	NW_004457712.1	767669	771336	D	ACA1_291520	join(<767669..767775,768112..770097,770182..770400,770478..770812,770960..>771336)	Acanthamoeba castellanii str. Neff	14926394
ACA1_291530	mRNA	ACA1_291530	NW_004457712.1	771691	772095	D	ACA1_291530	<771691..>772095	Acanthamoeba castellanii str. Neff	14926395
ACA1_291540	mRNA	ACA1_291540	NW_004457712.1	772314	775762	R	ACA1_291540	complement(join(<772314..772657,772773..773200,773330..773435,773502..773673,773787..773933,774012..774149,774230..774506,774640..774803,774885..775238,775421..>775762))	Acanthamoeba castellanii str. Neff	14926396
ACA1_291550	mRNA	ACA1_291550	NW_004457712.1	775958	776803	D	ACA1_291550	<775958..>776803	Acanthamoeba castellanii str. Neff	14926397
ACA1_291560	mRNA	ACA1_291560	NW_004457712.1	777237	778037	D	ACA1_291560	join(<777237..777413,777527..777805,777876..>778037)	Acanthamoeba castellanii str. Neff	14926398
ACA1_291570	mRNA	ACA1_291570	NW_004457712.1	778628	780029	D	ACA1_291570	join(<778628..778861,779338..779439,779564..779697,779861..>780029)	Acanthamoeba castellanii str. Neff	14926399
ACA1_291580	mRNA	ACA1_291580	NW_004457712.1	780138	781133	R	ACA1_291580	complement(join(<780138..780825,780892..>781133))	Acanthamoeba castellanii str. Neff	14926400
ACA1_291590	mRNA	ACA1_291590	NW_004457712.1	781856	783004	D	ACA1_291590	join(<781856..782032,782135..782251,782263..782292,782388..782531,782615..>783004)	Acanthamoeba castellanii str. Neff	14926401
ACA1_291600	mRNA	ACA1_291600	NW_004457712.1	783168	784700	R	ACA1_291600	complement(join(<783168..783258,783413..783503,783633..783784,783905..783977,784128..784187,784263..784333,784473..784568,784672..>784700))	Acanthamoeba castellanii str. Neff	14926402
ACA1_291610	mRNA	ACA1_291610	NW_004457712.1	785127	786188	D	ACA1_291610	join(<785127..785273,785379..785539,785608..785779,785880..>786188)	Acanthamoeba castellanii str. Neff	14926403
ACA1_291620	mRNA	ACA1_291620	NW_004457712.1	786321	786944	R	ACA1_291620	complement(join(<786321..786492,786566..786643,786713..786818,786893..>786944))	Acanthamoeba castellanii str. Neff	14926404
ACA1_291630	mRNA	ACA1_291630	NW_004457712.1	787112	790598	D	ACA1_291630	join(<787112..787206,787356..787426,787485..787605,787730..787762,787946..788022,788135..788227,788319..788436,788540..788605,788716..788907,789031..789087,789311..789460,789568..789656,789752..789827,789906..790024,790102..790181,790302..790466,790548..>790598)	Acanthamoeba castellanii str. Neff	14926405
ACA1_291640	mRNA	ACA1_291640	NW_004457712.1	791368	795998	D	ACA1_291640	join(<791368..791532,791607..791692,791783..792335,792431..792604,792714..792969,793256..793621,793712..793972,794079..794267,794361..794755,794848..795030,795118..795264,795461..795625,795921..>795998)	Acanthamoeba castellanii str. Neff	14926406
ACA1_291650	mRNA	ACA1_291650	NW_004457712.1	796964	797775	D	ACA1_291650	join(<796964..797044,797158..797271,797346..797482,797619..>797775)	Acanthamoeba castellanii str. Neff	14926407
ACA1_291660	mRNA	ACA1_291660	NW_004457712.1	798047	801809	R	ACA1_291660	complement(join(<798047..798241,798472..798633,798738..798838,798942..799033,799134..799275,799390..799469,799557..799610,799703..799842,799979..800299,800383..800442,800577..800714,800796..800879,800962..801077,801186..801236,801332..>801809))	Acanthamoeba castellanii str. Neff	14926408
ACA1_291670	mRNA	ACA1_291670	NW_004457712.1	802346	803935	R	ACA1_291670	complement(<802346..>803935)	Acanthamoeba castellanii str. Neff	14926409
ACA1_291690	mRNA	ACA1_291690	NW_004457712.1	806963	811012	D	ACA1_291690	join(<806963..807139,807251..807385,807520..807646,807767..808143,808229..808348,808494..808967,809075..809188,809272..809467,809549..809635,809719..809840,809911..810221,810328..810624,810733..>811012)	Acanthamoeba castellanii str. Neff	14926411
ACA1_291700	mRNA	ACA1_291700	NW_004457712.1	811333	813306	D	ACA1_291700	join(<811333..811627,811938..812088,812183..812231,812356..812592,812719..812947,813035..>813306)	Acanthamoeba castellanii str. Neff	14926412
ACA1_291710	mRNA	ACA1_291710	NW_004457712.1	813365	815631	R	ACA1_291710	complement(join(<813365..813647,813724..813809,813881..813996,814082..814203,814318..814452,814564..814639,814744..814877,814956..815065,815145..815291,815428..>815631))	Acanthamoeba castellanii str. Neff	14926413
ACA1_291720	mRNA	ACA1_291720	NW_004457712.1	816776	817342	D	ACA1_291720	join(<816776..816938,817048..817153,817243..>817342)	Acanthamoeba castellanii str. Neff	14926414
ACA1_291730	mRNA	ACA1_291730	NW_004457712.1	817454	820773	D	ACA1_291730	join(<817454..817550,817630..817760,817816..817941,818254..818442,818506..818596,818674..818756,818885..818957,819268..819530,819677..819984,820078..820172,820349..>820773)	Acanthamoeba castellanii str. Neff	14926415
ACA1_291740	mRNA	ACA1_291740	NW_004457712.1	820881	824318	R	ACA1_291740	complement(join(<820881..821018,821125..821187,821272..821390,821490..821573,821693..821825,822066..822146,822255..822370,822489..822565,822650..822696,822798..822932,823029..823148,823240..823507,823633..823723,823853..824214,824245..>824318))	Acanthamoeba castellanii str. Neff	14926416
ACA1_291750	mRNA	ACA1_291750	NW_004457712.1	824858	829845	D	ACA1_291750	join(<824858..825299,825619..825704,825891..826113,826218..826426,826534..826707,826811..826969,827041..827130,827237..827815,827915..828309,828400..828622,828731..828883,828995..829078,829194..829330,829464..829607,829725..>829845)	Acanthamoeba castellanii str. Neff	14926417
ACA1_291760	mRNA	ACA1_291760	NW_004457712.1	829940	832805	R	ACA1_291760	complement(join(<829940..830784,830915..831152,831249..831381,831488..831773,831983..832160,832293..>832805))	Acanthamoeba castellanii str. Neff	14926418
ACA1_291770	mRNA	ACA1_291770	NW_004457712.1	833677	835383	R	ACA1_291770	complement(join(<833677..834596,834684..834898,835052..835127,835278..>835383))	Acanthamoeba castellanii str. Neff	14926419
ACA1_291780	mRNA	ACA1_291780	NW_004457712.1	835795	838976	R	ACA1_291780	complement(join(<835795..836799,838491..>838976))	Acanthamoeba castellanii str. Neff	14926420
ACA1_291890	mRNA	ACA1_291890	NW_004457712.1	839331	843308	R	ACA1_291890	complement(join(<839331..839453,839502..839778,839866..839951,840023..840266,840395..840496,840572..840717,840856..841001,841124..841516,841620..841701,841811..841963,842151..842273,842572..842689,843205..>843308))	Acanthamoeba castellanii str. Neff	14926421
ACA1_291900	mRNA	ACA1_291900	NW_004457712.1	844228	846745	R	ACA1_291900	complement(join(<844228..844829,844915..844985,845164..845306,845401..845522,845642..845813,845887..845970,846063..846160,846252..846371,846508..>846745))	Acanthamoeba castellanii str. Neff	14926422
ACA1_291910	mRNA	ACA1_291910	NW_004457712.1	846970	850992	R	ACA1_291910	complement(join(<846970..848664,848760..848903,849026..849427,849529..849656,849733..849797,849904..850061,850141..850276,850365..850498,850581..850748,850843..>850992))	Acanthamoeba castellanii str. Neff	14926423
ACA1_292020	mRNA	ACA1_292020	NW_004457712.1	855097	855507	D	ACA1_292020	join(<855097..855220,855341..>855507)	Acanthamoeba castellanii str. Neff	14926424
ACA1_292130	mRNA	ACA1_292130	NW_004457712.1	857833	858678	R	ACA1_292130	complement(join(<857833..857928,858063..858199,858422..858592,858660..>858678))	Acanthamoeba castellanii str. Neff	14926425
ACA1_292140	mRNA	ACA1_292140	NW_004457712.1	860187	860552	R	ACA1_292140	complement(join(<860187..860346,860437..>860552))	Acanthamoeba castellanii str. Neff	14926426
ACA1_292150	mRNA	ACA1_292150	NW_004457712.1	861452	862639	D	ACA1_292150	join(<861452..862078,862142..>862639)	Acanthamoeba castellanii str. Neff	14926427
ACA1_292160	mRNA	ACA1_292160	NW_004457712.1	864239	864898	D	ACA1_292160	join(<864239..864393,864412..>864898)	Acanthamoeba castellanii str. Neff	14926428
ACA1_292170	mRNA	ACA1_292170	NW_004457712.1	865325	865800	D	ACA1_292170	join(<865325..865388,865433..>865800)	Acanthamoeba castellanii str. Neff	14926429
ACA1_292180	mRNA	ACA1_292180	NW_004457712.1	865960	866568	R	ACA1_292180	complement(join(<865960..866217,866281..>866568))	Acanthamoeba castellanii str. Neff	14926430
ACA1_292190	mRNA	ACA1_292190	NW_004457712.1	868364	869381	R	ACA1_292190	complement(join(<868364..868412,868502..868593,868789..868884,868973..869065,869292..>869381))	Acanthamoeba castellanii str. Neff	14926431
ACA1_292310	mRNA	ACA1_292310	NW_004457712.1	873620	874283	R	ACA1_292310	complement(join(<873620..873683,873815..873916,874086..874138,874200..>874283))	Acanthamoeba castellanii str. Neff	14926433
ACA1_292420	mRNA	ACA1_292420	NW_004457712.1	877517	879218	D	ACA1_292420	join(<877517..877997,878301..879089,879190..>879218)	Acanthamoeba castellanii str. Neff	14926434
ACA1_292440	mRNA	ACA1_292440	NW_004457712.1	887132	891823	D	ACA1_292440	join(<887132..887163,887376..887456,887488..887602,887706..887733,887996..888351,888460..888468,888527..888630,888708..888800,889218..889320,889669..889775,889858..889981,890083..890141,890266..890354,890497..890612,890686..890725,890861..891186,891386..891477,891583..891695,891807..>891823)	Acanthamoeba castellanii str. Neff	14926436
ACA1_292650	mRNA	ACA1_292650	NW_004457712.1	892092	893069	R	ACA1_292650	complement(join(<892092..892237,892355..892514,892619..892733,892861..>893069))	Acanthamoeba castellanii str. Neff	14926437
ACA1_292760	mRNA	ACA1_292760	NW_004457712.1	893228	894490	D	ACA1_292760	join(<893228..893333,893399..893564,893698..893818,893915..893972,893996..894049,894103..894327,894393..>894490)	Acanthamoeba castellanii str. Neff	14926438
ACA1_292770	mRNA	ACA1_292770	NW_004457712.1	896546	897553	R	ACA1_292770	complement(join(<896546..896691,896809..896968,897084..897198,897345..>897553))	Acanthamoeba castellanii str. Neff	14926439
ACA1_292780	mRNA	ACA1_292780	NW_004457712.1	897969	899287	R	ACA1_292780	complement(join(<897969..898148,898294..898388,898485..898603,898698..898951,899123..>899287))	Acanthamoeba castellanii str. Neff	14926440
ACA1_292790	mRNA	ACA1_292790	NW_004457712.1	899705	902935	D	ACA1_292790	join(<899705..900097,900218..900282,900348..900448,900535..900618,900704..900841,900937..901028,901207..901351,901451..901602,901685..901838,901938..902033,902144..902266,902377..902563,902662..>902935)	Acanthamoeba castellanii str. Neff	14926441
ACA1_292800	mRNA	ACA1_292800	NW_004457712.1	903028	906643	D	ACA1_292800	join(<903028..903116,903200..903639,903732..903806,903945..904026,904231..904378,904486..904557,904658..904724,904941..905119,905189..905445,905596..905759,905853..906259,906384..906458,906530..>906643)	Acanthamoeba castellanii str. Neff	14926442
ACA1_292810	mRNA	ACA1_292810	NW_004457712.1	906753	909044	R	ACA1_292810	complement(join(<906753..906869,906977..907159,907324..907405,907530..907708,907843..908276,908392..908719,908808..>909044))	Acanthamoeba castellanii str. Neff	14926443
ACA1_292820	mRNA	ACA1_292820	NW_004457712.1	909329	910357	R	ACA1_292820	complement(join(<909329..909547,909665..909756,909823..910073,910305..>910357))	Acanthamoeba castellanii str. Neff	14926444
ACA1_292830	mRNA	ACA1_292830	NW_004457712.1	910647	914186	D	ACA1_292830	join(<910647..910756,910823..910925,910989..911090,911217..911318,911440..911581,911727..911944,912039..912132,912252..912382,912550..912636,912712..912858,912996..913130,913237..913434,913545..>914186)	Acanthamoeba castellanii str. Neff	14926445
ACA1_292840	mRNA	ACA1_292840	NW_004457712.1	914538	915575	R	ACA1_292840	complement(<914538..>915575)	Acanthamoeba castellanii str. Neff	14926446
ACA1_292850	mRNA	ACA1_292850	NW_004457712.1	916150	917307	D	ACA1_292850	<916150..>917307	Acanthamoeba castellanii str. Neff	14926447
ACA1_292860	mRNA	ACA1_292860	NW_004457712.1	917863	920825	D	ACA1_292860	join(<917863..918053,918166..918194,918304..918407,918484..918573,918665..918874,918963..919106,919185..919248,919342..919596,919685..919783,919953..920050,920210..920347,920466..>920825)	Acanthamoeba castellanii str. Neff	14926448
ACA1_292870	mRNA	ACA1_292870	NW_004457712.1	920937	922617	R	ACA1_292870	complement(join(<920937..921521,921635..921746,922416..922474,922540..>922617))	Acanthamoeba castellanii str. Neff	14926449
ACA1_292880	mRNA	ACA1_292880	NW_004457712.1	922782	927423	R	ACA1_292880	complement(join(<922782..923265,923349..923608,923691..923927,924016..924075,924184..924291,924389..924577,924699..924787,924891..926116,926186..>927423))	Acanthamoeba castellanii str. Neff	14926450
ACA1_292890	mRNA	ACA1_292890	NW_004457712.1	928583	929295	R	ACA1_292890	complement(join(<928583..928676,928749..929125,929281..>929295))	Acanthamoeba castellanii str. Neff	14926451
ACA1_292900	mRNA	ACA1_292900	NW_004457712.1	929503	931696	R	ACA1_292900	complement(join(<929503..929627,929728..930046,930164..930349,930428..930872,931013..931299,931373..931510,931604..>931696))	Acanthamoeba castellanii str. Neff	14926452
ACA1_292910	mRNA	ACA1_292910	NW_004457712.1	932139	933792	D	ACA1_292910	join(<932139..932246,932429..932809,932908..933063,933173..933478,933556..>933792)	Acanthamoeba castellanii str. Neff	14926453
ACA1_292920	mRNA	ACA1_292920	NW_004457712.1	933946	935324	R	ACA1_292920	complement(join(<933946..933983,934106..934178,934307..934423,934531..934646,934773..934923,935015..935128,935211..>935324))	Acanthamoeba castellanii str. Neff	14926454
ACA1_292930	mRNA	ACA1_292930	NW_004457712.1	935605	937082	R	ACA1_292930	complement(join(<935605..935610,935809..935854,935952..936051,936175..936205,936423..936485,936588..>937082))	Acanthamoeba castellanii str. Neff	14926455
ACA1_293040	mRNA	ACA1_293040	NW_004457712.1	938683	939707	R	ACA1_293040	complement(join(<938683..938790,938828..938883,938961..939058,939286..939382,939407..939511,939638..>939707))	Acanthamoeba castellanii str. Neff	14926456
ACA1_293050	mRNA	ACA1_293050	NW_004457712.1	940102	942615	R	ACA1_293050	complement(join(<940102..940170,940469..940579,940677..940862,940976..941237,941348..941564,941635..941865,942249..>942615))	Acanthamoeba castellanii str. Neff	14926457
ACA1_293160	mRNA	ACA1_293160	NW_004457712.1	942768	944878	R	ACA1_293160	complement(join(<942768..942904,943036..943175,943939..944063,944075..944152,944173..944235,944353..944562,944663..944767,944801..>944878))	Acanthamoeba castellanii str. Neff	14926458
ACA1_293270	mRNA	ACA1_293270	NW_004457712.1	945400	946259	R	ACA1_293270	complement(join(<945400..945525,945639..945753,945785..945865,946228..>946259))	Acanthamoeba castellanii str. Neff	14926459
ACA1_293580	mRNA	ACA1_293580	NW_004457712.1	958614	959619	D	ACA1_293580	join(<958614..958626,958667..958721,958885..958931,958982..959001,959067..959108,959377..959449,959486..>959619)	Acanthamoeba castellanii str. Neff	14926460
ACA1_293590	mRNA	ACA1_293590	NW_004457712.1	959872	960102	D	ACA1_293590	<959872..>960102	Acanthamoeba castellanii str. Neff	14926461
ACA1_293700	mRNA	ACA1_293700	NW_004457712.1	961421	961983	D	ACA1_293700	join(<961421..961560,961657..961691,961850..>961983)	Acanthamoeba castellanii str. Neff	14926462
ACA1_293710	mRNA	ACA1_293710	NW_004457712.1	963065	965612	D	ACA1_293710	join(<963065..963176,963332..963380,963504..963653,963748..963778,963952..964075,964217..964236,964316..964374,964534..964674,964771..964803,964914..964998,965115..965243,965356..965419,965512..>965612)	Acanthamoeba castellanii str. Neff	14926463
ACA1_293720	mRNA	ACA1_293720	NW_004457712.1	965858	967341	R	ACA1_293720	complement(join(<965858..966245,966378..966651,966743..967015,967101..>967341))	Acanthamoeba castellanii str. Neff	14926464
ACA1_293730	mRNA	ACA1_293730	NW_004457712.1	967662	969266	D	ACA1_293730	join(<967662..967823,967896..967952,968062..968202,968296..969082,969175..>969266)	Acanthamoeba castellanii str. Neff	14926465
ACA1_293740	mRNA	ACA1_293740	NW_004457712.1	969494	973816	R	ACA1_293740	complement(join(<969494..969626,969729..969799,969948..970082,970189..970272,970356..970451,970627..971105,971210..971321,971435..971519,971600..971787,971902..972019,972148..972248,972328..972426,972620..972736,972835..972970,973050..973161,973295..973348,973459..973636,973670..>973816))	Acanthamoeba castellanii str. Neff	14926466
ACA1_293850	mRNA	ACA1_293850	NW_004457712.1	974861	975794	R	ACA1_293850	complement(join(<974861..975006,975175..975250,975477..>975794))	Acanthamoeba castellanii str. Neff	14926467
ACA1_293860	mRNA	ACA1_293860	NW_004457712.1	976422	980696	D	ACA1_293860	join(<976422..976613,976694..976777,976869..977012,977130..977319,977434..977570,977748..977907,978080..978179,978274..978574,978668..978802,978939..979007,979119..980224,980375..>980696)	Acanthamoeba castellanii str. Neff	14926468
ACA1_293870	mRNA	ACA1_293870	NW_004457712.1	980844	981856	R	ACA1_293870	complement(join(<980844..981274,981373..981495,981616..>981856))	Acanthamoeba castellanii str. Neff	14926469
ACA1_293880	mRNA	ACA1_293880	NW_004457712.1	982128	984270	R	ACA1_293880	complement(join(<982128..982265,982341..982528,982648..982803,982892..983068,983153..983317,983463..983515,983709..983826,983940..984113,984192..>984270))	Acanthamoeba castellanii str. Neff	14926470
ACA1_293890	mRNA	ACA1_293890	NW_004457712.1	984456	987471	D	ACA1_293890	join(<984456..984603,984733..984904,985051..985237,985438..985527,985658..985766,985866..986073,986233..986389,986459..986584,986624..986851,986945..987036,987136..987232,987322..>987471)	Acanthamoeba castellanii str. Neff	14926471
ACA1_293900	mRNA	ACA1_293900	NW_004457712.1	988059	999793	D	ACA1_293900	join(<988059..988439,988619..988828,988930..989289,989374..989744,989834..994134,994272..997634,997893..998996,999122..999358,999480..>999793)	Acanthamoeba castellanii str. Neff	14926472
ACA1_293900	mRNA	ACA1_293900	NW_004457712.1	999987	1001379	D	ACA1_293900	join(<999987..1000152,1000289..1000389,1000483..1000626,1000656..1000771,1000841..1000951,1001047..1001157,1001245..1001290,1001335..>1001379)	Acanthamoeba castellanii str. Neff	14926472
ACA1_293920	mRNA	ACA1_293920	NW_004457712.1	1005421	1006010	R	ACA1_293920	complement(join(<1005421..1005458,1005561..1005626,1005739..1005799,1005969..>1006010))	Acanthamoeba castellanii str. Neff	14926474
ACA1_293930	mRNA	ACA1_293930	NW_004457712.1	1006738	1007135	R	ACA1_293930	complement(join(<1006738..1006862,1006877..>1007135))	Acanthamoeba castellanii str. Neff	14926475
ACA1_293940	mRNA	ACA1_293940	NW_004457712.1	1007545	1007904	R	ACA1_293940	complement(join(<1007545..1007704,1007789..>1007904))	Acanthamoeba castellanii str. Neff	14926476
ACA1_294260	mRNA	ACA1_294260	NW_004457712.1	1020500	1021826	D	ACA1_294260	join(<1020500..1020707,1020937..>1021826)	Acanthamoeba castellanii str. Neff	14926478
ACA1_294480	mRNA	ACA1_294480	NW_004457712.1	1027887	1028904	D	ACA1_294480	join(<1027887..1028028,1028386..1028449,1028585..1028706,1028807..>1028904)	Acanthamoeba castellanii str. Neff	14926480
ACA1_294700	mRNA	ACA1_294700	NW_004457712.1	1035435	1036663	D	ACA1_294700	join(<1035435..1035500,1035563..1036399,1036571..>1036663)	Acanthamoeba castellanii str. Neff	14926482
ACA1_294810	mRNA	ACA1_294810	NW_004457712.1	1037644	1038426	D	ACA1_294810	join(<1037644..1037751,1038226..1038292,1038372..>1038426)	Acanthamoeba castellanii str. Neff	14926483
ACA1_294830	mRNA	ACA1_294830	NW_004457712.1	1042831	1044964	D	ACA1_294830	join(<1042831..1043054,1043229..1043534,1043764..>1044964)	Acanthamoeba castellanii str. Neff	14926485
ACA1_294840	mRNA	ACA1_294840	NW_004457712.1	1045921	1046683	D	ACA1_294840	join(<1045921..1046068,1046187..1046380,1046459..>1046683)	Acanthamoeba castellanii str. Neff	14926486
ACA1_294850	mRNA	ACA1_294850	NW_004457712.1	1046825	1048659	R	ACA1_294850	complement(join(<1046825..1046875,1046970..1047051,1047150..1047393,1047521..1047641,1047838..1047858,1048016..1048093,1048207..1048390,1048472..>1048659))	Acanthamoeba castellanii str. Neff	14926487
ACA1_294860	mRNA	ACA1_294860	NW_004457712.1	1048843	1051493	R	ACA1_294860	complement(join(<1048843..1049024,1049243..1049423,1049552..1050074,1050189..1050277,1050415..1050570,1050760..1050807,1050932..1050977,1051075..>1051493))	Acanthamoeba castellanii str. Neff	14926488
ACA1_294870	mRNA	ACA1_294870	NW_004457712.1	1051623	1053785	R	ACA1_294870	complement(join(<1051623..1052007,1052118..1052224,1052398..1052555,1052714..1052954,1053130..1053341,1053424..1053688,1053783..>1053785))	Acanthamoeba castellanii str. Neff	14926489
ACA1_294880	mRNA	ACA1_294880	NW_004457712.1	1054015	1056135	D	ACA1_294880	join(<1054015..1054238,1054363..1054448,1054553..1054839,1055000..1055096,1055215..1055285,1055372..1055549,1055650..1055845,1056021..>1056135)	Acanthamoeba castellanii str. Neff	14926490
ACA1_294890	mRNA	ACA1_294890	NW_004457712.1	1056308	1058041	D	ACA1_294890	join(<1056308..1056387,1056579..1056749,1056919..1057642,1057762..1057851,1057949..>1058041)	Acanthamoeba castellanii str. Neff	14926491
ACA1_294900	mRNA	ACA1_294900	NW_004457712.1	1058340	1066802	R	ACA1_294900	complement(join(<1058340..1058975,1059079..1059309,1059505..1060311,1060465..1060803,1060929..1061143,1061406..1061724,1061899..1062091,1062213..1062375,1062504..1062714,1062804..1063017,1063164..1063345,1063359..1063394,1063493..1063585,1063748..1064033,1064144..1064226,1064325..1064937,1065011..1065093,1065222..1065443,1065648..1065911,1065936..1066003,1066072..1066307,1066615..>1066802))	Acanthamoeba castellanii str. Neff	14926492
ACA1_294910	mRNA	ACA1_294910	NW_004457712.1	1066571	1067920	D	ACA1_294910	join(<1066571..1066575,1066613..1066693,1066725..1066839,1066948..1066975,1067035..1067101,1067190..1067498,1067524..1067548,1067771..>1067920)	Acanthamoeba castellanii str. Neff	14926494
ACA1_294920	mRNA	ACA1_294920	NW_004457712.1	1067996	1068985	D	ACA1_294920	join(<1067996..1068081,1068227..1068270,1068308..1068503,1068628..1068718,1068887..>1068985)	Acanthamoeba castellanii str. Neff	14926493
ACA1_294930	mRNA	ACA1_294930	NW_004457712.1	1069299	1071794	D	ACA1_294930	join(<1069299..1069334,1069569..1070105,1070240..1070664,1070710..1070748,1070761..1071315,1071418..1071652,1071732..>1071794)	Acanthamoeba castellanii str. Neff	14926495
ACA1_295040	mRNA	ACA1_295040	NW_004457712.1	1072612	1074083	D	ACA1_295040	join(<1072612..1072852,1072925..1073120,1073215..1073476,1073553..1073754,1073863..1073943,1074079..>1074083)	Acanthamoeba castellanii str. Neff	14926496
ACA1_295150	mRNA	ACA1_295150	NW_004457712.1	1078993	1085506	D	ACA1_295150	join(<1078993..1079077,1079375..1079481,1080291..1080873,1080997..1081119,1081275..1081389,1081570..1081703,1081867..1081998,1082202..1082341,1082556..1082628,1082751..1082873,1082978..1083078,1083204..1083285,1083512..1083618,1083771..1083890,1083985..1084064,1084224..1084348,1084496..1084542,1084704..1084785,1084921..1085002,1085089..>1085506)	Acanthamoeba castellanii str. Neff	14926497
ACA1_295260	mRNA	ACA1_295260	NW_004457712.1	1085844	1087551	D	ACA1_295260	join(<1085844..1085960,1086127..1086221,1086441..1086620,1086843..>1087551)	Acanthamoeba castellanii str. Neff	14926498
ACA1_295270	mRNA	ACA1_295270	NW_004457712.1	1087798	1089355	R	ACA1_295270	complement(join(<1087798..1087863,1087957..1088137,1088305..1088461,1088629..1088673,1088714..1088796,1088878..1089066,1089219..>1089355))	Acanthamoeba castellanii str. Neff	14926499
ACA1_295280	mRNA	ACA1_295280	NW_004457712.1	1089702	1090807	D	ACA1_295280	join(<1089702..1089706,1089822..1090519,1090586..1090666,1090743..>1090807)	Acanthamoeba castellanii str. Neff	14926500
ACA1_295290	mRNA	ACA1_295290	NW_004457712.1	1091201	1092457	D	ACA1_295290	join(<1091201..1091266,1091474..1091798,1091871..1091953,1092041..>1092457)	Acanthamoeba castellanii str. Neff	14926501
ACA1_295300	mRNA	ACA1_295300	NW_004457712.1	1092572	1102402	R	ACA1_295300	complement(join(<1092572..1093030,1093146..1093226,1093413..1093545,1093849..1094698,1094826..1095839,1095978..1096068,1096175..1096926,1097099..1097247,1097364..1097893,1097991..1098758,1098924..1099249,1099389..1100061,1100210..1100782,1100966..1101085,1101200..1101309,1101471..1101617,1101774..1101863,1101994..1102152,1102378..>1102402))	Acanthamoeba castellanii str. Neff	14926502
ACA1_295310	mRNA	ACA1_295310	NW_004457712.1	1102927	1103789	R	ACA1_295310	complement(join(<1102927..1102959,1103046..1103144,1103276..1103311,1103386..1103494,1103608..>1103789))	Acanthamoeba castellanii str. Neff	14926503
ACA1_295320	mRNA	ACA1_295320	NW_004457712.1	1103911	1104913	D	ACA1_295320	join(<1103911..1104149,1104260..1104376,1104492..1104622,1104699..>1104913)	Acanthamoeba castellanii str. Neff	14926504
ACA1_295330	mRNA	ACA1_295330	NW_004457712.1	1105744	1107938	D	ACA1_295330	join(<1105744..1107252,1107364..1107837,1107930..>1107938)	Acanthamoeba castellanii str. Neff	14926505
ACA1_295340	mRNA	ACA1_295340	NW_004457712.1	1108218	1109235	R	ACA1_295340	complement(join(<1108218..1108263,1108388..1108539,1108623..1108706,1108895..1109042,1109126..>1109235))	Acanthamoeba castellanii str. Neff	14926506
ACA1_295350	mRNA	ACA1_295350	NW_004457712.1	1109379	1112643	R	ACA1_295350	complement(join(<1109379..1109840,1109969..1110132,1110292..1110414,1110530..1110631,1110754..1110887,1110947..1111122,1111203..1111329,1111436..1111530,1111568..1111733,1111876..1111907,1111956..1111994,1112102..1112188,1112375..1112407,1112488..>1112643))	Acanthamoeba castellanii str. Neff	14926507
ACA1_295360	mRNA	ACA1_295360	NW_004457712.1	1112785	1113228	D	ACA1_295360	<1112785..>1113228	Acanthamoeba castellanii str. Neff	14926508
ACA1_295370	mRNA	ACA1_295370	NW_004457712.1	1113529	1118058	D	ACA1_295370	join(<1113529..1113663,1113851..1114088,1114217..1114335,1114435..1114640,1114758..1114904,1115020..1115336,1115485..1117589,1117783..>1118058)	Acanthamoeba castellanii str. Neff	14926509
ACA1_295380	mRNA	ACA1_295380	NW_004457712.1	1118395	1122336	D	ACA1_295380	join(<1118395..1118451,1118664..1118743,1118863..1119275,1119306..1120486,1120598..1120747,1120851..1121076,1121187..1121346,1121433..1121559,1121680..1121871,1122019..1122132,1122238..>1122336)	Acanthamoeba castellanii str. Neff	14926510
ACA1_295390	mRNA	ACA1_295390	NW_004457712.1	1122605	1125537	R	ACA1_295390	complement(join(<1122605..1122698,1122835..1122980,1123075..1123211,1123298..1123313,1123413..1123488,1123613..1123701,1123823..1123957,1124081..1124221,1124362..1124412,1124523..1124678,1124795..1124931,1125129..1125158,1125266..1125353,1125415..>1125537))	Acanthamoeba castellanii str. Neff	14926511
ACA1_295400	mRNA	ACA1_295400	NW_004457712.1	1125835	1128145	D	ACA1_295400	join(<1125835..1126064,1126134..1126310,1126432..1126528,1126633..1126697,1126814..1126897,1126982..1127085,1127206..1127324,1127399..1127564,1127671..1127804,1127942..>1128145)	Acanthamoeba castellanii str. Neff	14926512
ACA1_295410	mRNA	ACA1_295410	NW_004457712.1	1128451	1128939	R	ACA1_295410	complement(<1128451..>1128939)	Acanthamoeba castellanii str. Neff	14926513
ACA1_295420	mRNA	ACA1_295420	NW_004457712.1	1129036	1131461	R	ACA1_295420	complement(join(<1129036..1129177,1129335..1129439,1129533..1129599,1129716..1129872,1129974..1130158,1130306..1130438,1130532..1130656,1130754..1130816,1130990..1131150,1131259..>1131461))	Acanthamoeba castellanii str. Neff	14926514
ACA1_295430	mRNA	ACA1_295430	NW_004457712.1	1131556	1132977	D	ACA1_295430	join(<1131556..1131840,1131925..1131990,1132065..1132448,1132540..1132693,1132778..>1132977)	Acanthamoeba castellanii str. Neff	14926515
ACA1_295440	mRNA	ACA1_295440	NW_004457712.1	1133251	1133653	R	ACA1_295440	complement(join(<1133251..1133339,1133365..>1133653))	Acanthamoeba castellanii str. Neff	14926516
ACA1_295450	mRNA	ACA1_295450	NW_004457712.1	1133991	1135160	D	ACA1_295450	join(<1133991..1134842,1135017..>1135160)	Acanthamoeba castellanii str. Neff	14926517
ACA1_295460	mRNA	ACA1_295460	NW_004457712.1	1136048	1136883	D	ACA1_295460	join(<1136048..1136112,1136228..1136333,1136472..1136567,1136743..>1136883)	Acanthamoeba castellanii str. Neff	14926518
ACA1_295480	mRNA	ACA1_295480	NW_004457712.1	1144075	1147228	D	ACA1_295480	join(<1144075..1144180,1144983..1145031,1145483..1145560,1146149..1146231,1146303..1146430,1146534..1146810,1146931..1147022,1147135..1147177,1147218..>1147228)	Acanthamoeba castellanii str. Neff	14926520
ACA1_295490	mRNA	ACA1_295490	NW_004457712.1	1151662	1151856	R	ACA1_295490	complement(<1151662..>1151856)	Acanthamoeba castellanii str. Neff	14926521
ACA1_295500	mRNA	ACA1_295500	NW_004457712.1	1152028	1152621	R	ACA1_295500	complement(join(<1152028..1152237,1152307..>1152621))	Acanthamoeba castellanii str. Neff	14926522
ACA1_295510	mRNA	ACA1_295510	NW_004457712.1	1154224	1156509	D	ACA1_295510	join(<1154224..1154250,1154366..1154469,1154565..1154673,1154753..1155062,1155197..1155426,1155515..1155677,1155752..1156170,1156474..>1156509)	Acanthamoeba castellanii str. Neff	14926523
ACA1_295520	mRNA	ACA1_295520	NW_004457712.1	1156708	1160743	D	ACA1_295520	join(<1156708..1157121,1157235..1157475,1157603..1157697,1157817..1157899,1158068..1158143,1158258..1158392,1158617..1158694,1158819..1158945,1159038..1159120,1159222..1159257,1159462..1159563,1159730..1159832,1159931..1159984,1160322..>1160743)	Acanthamoeba castellanii str. Neff	14926524
ACA1_295530	mRNA	ACA1_295530	NW_004457712.1	1161187	1168252	D	ACA1_295530	join(<1161187..1161376,1161581..1161672,1161946..1163754,1163849..1163931,1164074..1164228,1164345..1164545,1164686..1164792,1164911..1165129,1165239..1165439,1165536..1165751,1165856..1165936,1166092..1166196,1166336..1166400,1166479..1166602,1166690..1166746,1166839..1167040,1167173..1167310,1167396..1167720,1167829..>1168252)	Acanthamoeba castellanii str. Neff	14926525
ACA1_295540	mRNA	ACA1_295540	NW_004457712.1	1168577	1168954	D	ACA1_295540	join(<1168577..1168632,1168744..>1168954)	Acanthamoeba castellanii str. Neff	14926526
ACA1_295550	mRNA	ACA1_295550	NW_004457712.1	1169426	1172209	D	ACA1_295550	join(<1169426..1169476,1169504..1169770,1169863..1169888,1170044..1170179,1170295..1170440,1170630..1170758,1170866..1170997,1171119..1171222,1171362..1171444,1171577..1171640,1171746..1171879,1171967..>1172209)	Acanthamoeba castellanii str. Neff	14926527
ACA1_295560	mRNA	ACA1_295560	NW_004457712.1	1172333	1173012	R	ACA1_295560	complement(join(<1172333..1172523,1172638..1172769,1172928..>1173012))	Acanthamoeba castellanii str. Neff	14926528
ACA1_295570	mRNA	ACA1_295570	NW_004457712.1	1173365	1176525	D	ACA1_295570	join(<1173365..1173746,1173880..1174045,1174136..1174439,1174635..1174763,1174844..1175348,1175422..1175502,1175611..1175753,1175847..1175959,1176055..1176235,1176346..>1176525)	Acanthamoeba castellanii str. Neff	14926529
ACA1_295580	mRNA	ACA1_295580	NW_004457712.1	1176933	1178532	D	ACA1_295580	join(<1176933..1177076,1177239..1177433,1177546..1177642,1177750..1177892,1178011..1178149,1178234..1178391,1178467..>1178532)	Acanthamoeba castellanii str. Neff	14926530
ACA1_295590	mRNA	ACA1_295590	NW_004457712.1	1178858	1180956	R	ACA1_295590	complement(join(<1178858..1178919,1179049..1179165,1179262..1179402,1179517..1179623,1179784..1179893,1179995..1180049,1180164..1180318,1180475..1180662,1180827..>1180956))	Acanthamoeba castellanii str. Neff	14926531
ACA1_295600	mRNA	ACA1_295600	NW_004457712.1	1181175	1182470	R	ACA1_295600	complement(join(<1181175..1181303,1181426..1181563,1181653..1181790,1181912..1182052,1182144..1182161,1182435..>1182470))	Acanthamoeba castellanii str. Neff	14926532
ACA1_295610	mRNA	ACA1_295610	NW_004457712.1	1183135	1183398	D	ACA1_295610	<1183135..>1183398	Acanthamoeba castellanii str. Neff	14926533
ACA1_295620	mRNA	ACA1_295620	NW_004457712.1	1183518	1183985	D	ACA1_295620	<1183518..>1183985	Acanthamoeba castellanii str. Neff	14926534
ACA1_295630	mRNA	ACA1_295630	NW_004457712.1	1184236	1186707	R	ACA1_295630	complement(join(<1184236..1184396,1184438..1184529,1184624..1185573,1185692..1186488,1186683..>1186707))	Acanthamoeba castellanii str. Neff	14926535
ACA1_295640	mRNA	ACA1_295640	NW_004457712.1	1186886	1187393	R	ACA1_295640	complement(join(<1186886..1187122,1187265..>1187393))	Acanthamoeba castellanii str. Neff	14926536
ACA1_295650	mRNA	ACA1_295650	NW_004457712.1	1187856	1188773	R	ACA1_295650	complement(<1187856..>1188773)	Acanthamoeba castellanii str. Neff	14926537
ACA1_295660	mRNA	ACA1_295660	NW_004457712.1	1189041	1189940	R	ACA1_295660	complement(join(<1189041..1189283,1189416..1189665,1189783..>1189940))	Acanthamoeba castellanii str. Neff	14926538
ACA1_295670	mRNA	ACA1_295670	NW_004457712.1	1190010	1192186	R	ACA1_295670	complement(join(<1190010..1190235,1190397..1190577,1190680..1190815,1190930..1191046,1191198..1191277,1191368..1191387,1191604..1191738,1191839..1191928,1191997..1192042,1192144..>1192186))	Acanthamoeba castellanii str. Neff	14926539
ACA1_295680	mRNA	ACA1_295680	NW_004457712.1	1192364	1193696	R	ACA1_295680	complement(join(<1192364..1192531,1192622..1192700,1192853..1192905,1193004..1193129,1193269..1193370,1193547..>1193696))	Acanthamoeba castellanii str. Neff	14926540
ACA1_295690	mRNA	ACA1_295690	NW_004457712.1	1193979	1196071	R	ACA1_295690	complement(join(<1193979..1194110,1194219..1194322,1194395..1194473,1194563..1194769,1195052..1195207,1195292..1195434,1195557..1195605,1195701..1195781,1195943..>1196071))	Acanthamoeba castellanii str. Neff	14926541
ACA1_295700	mRNA	ACA1_295700	NW_004457712.1	1196297	1199300	R	ACA1_295700	complement(join(<1196297..1196469,1196553..1197099,1197175..1197278,1197371..1197454,1197580..1197607,1197710..1197841,1197945..1198022,1198110..1198238,1198355..1198552,1198674..>1199300))	Acanthamoeba castellanii str. Neff	14926542
ACA1_295710	mRNA	ACA1_295710	NW_004457712.1	1200593	1203616	R	ACA1_295710	complement(join(<1200593..1200831,1201000..1201154,1201220..1201346,1201418..1201544,1201634..1201755,1201890..1201937,1202083..1202317,1202556..1202840,1203048..1203135,1203235..1203471,1203537..>1203616))	Acanthamoeba castellanii str. Neff	14926543
ACA1_295720	mRNA	ACA1_295720	NW_004457712.1	1202873	1203013	D	ACA1_295720	<1202873..>1203013	Acanthamoeba castellanii str. Neff	14926545
ACA1_295730	mRNA	ACA1_295730	NW_004457712.1	1204326	1205620	R	ACA1_295730	complement(join(<1204326..1204356,1204704..1204837,1204930..1205205,1205270..1205326,1205435..>1205620))	Acanthamoeba castellanii str. Neff	14926544
ACA1_295740	mRNA	ACA1_295740	NW_004457712.1	1205670	1208099	D	ACA1_295740	join(<1205670..1205733,1205892..1206027,1206190..1206301,1206443..1206520,1206648..1206837,1206967..1207098,1207181..1207343,1207446..1207530,1207799..1207861,1208001..>1208099)	Acanthamoeba castellanii str. Neff	14926546
ACA1_295760	mRNA	ACA1_295760	NW_004457712.1	1219543	1226082	D	ACA1_295760	join(<1219543..1219776,1219879..1220068,1220227..1220315,1220474..1221369,1221512..1221606,1221705..1221870,1221955..1222243,1222366..1222530,1222663..1222752,1222868..1222963,1223097..1223220,1223340..1223619,1223738..1223804,1223884..1224696,1224779..1224964,1225066..1225332,1225445..1225629,1225713..1225855,1225961..>1226082)	Acanthamoeba castellanii str. Neff	14926548
ACA1_295770	mRNA	ACA1_295770	NW_004457712.1	1226259	1226804	R	ACA1_295770	complement(join(<1226259..1226429,1226510..1226581,1226706..>1226804))	Acanthamoeba castellanii str. Neff	14926549
ACA1_295780	mRNA	ACA1_295780	NW_004457712.1	1227052	1228566	R	ACA1_295780	complement(join(<1227052..1227069,1227159..1227182,1227332..1227477,1227615..1227741,1227870..1227949,1228091..1228266,1228418..>1228566))	Acanthamoeba castellanii str. Neff	14926550
ACA1_295790	mRNA	ACA1_295790	NW_004457712.1	1228676	1232118	R	ACA1_295790	complement(join(<1228676..1229338,1229636..1230025,1230109..1230234,1230336..1230507,1230591..1230746,1230859..1230874,1230960..1231092,1231434..1231501,1231637..1231786,1231905..>1232118))	Acanthamoeba castellanii str. Neff	14926551
ACA1_295800	mRNA	ACA1_295800	NW_004457712.1	1232801	1234237	D	ACA1_295800	<1232801..>1234237	Acanthamoeba castellanii str. Neff	14926552
ACA1_295810	mRNA	ACA1_295810	NW_004457712.1	1234621	1238150	D	ACA1_295810	join(<1234621..1234834,1234995..1235551,1235659..1236327,1236408..1236476,1236566..1236755,1236839..1237101,1237226..1237309,1237449..1237589,1237792..1237884,1238013..>1238150)	Acanthamoeba castellanii str. Neff	14926553
ACA1_295820	mRNA	ACA1_295820	NW_004457712.1	1238381	1240118	D	ACA1_295820	join(<1238381..1238450,1238615..1238714,1238865..1239457,1239604..1239748,1239848..>1240118)	Acanthamoeba castellanii str. Neff	14926554
ACA1_295830	mRNA	ACA1_295830	NW_004457712.1	1240626	1241595	D	ACA1_295830	join(<1240626..1240934,1241164..>1241595)	Acanthamoeba castellanii str. Neff	14926555
ACA1_295840	mRNA	ACA1_295840	NW_004457712.1	1242152	1243230	D	ACA1_295840	join(<1242152..1242391,1242777..1242896,1242982..>1243230)	Acanthamoeba castellanii str. Neff	14926556
ACA1_295850	mRNA	ACA1_295850	NW_004457712.1	1243658	1246787	D	ACA1_295850	join(<1243658..1244078,1244182..1244357,1244417..1244604,1244713..1244846,1244984..1245076,1245196..1245466,1245672..1245759,1245827..1245910,1246078..1246198,1246292..1246474,1246553..1246637,1246720..>1246787)	Acanthamoeba castellanii str. Neff	14926557
ACA1_295860	mRNA	ACA1_295860	NW_004457712.1	1246993	1248742	R	ACA1_295860	complement(join(<1246993..1248078,1248124..1248202,1248279..1248379,1248491..>1248742))	Acanthamoeba castellanii str. Neff	14926558
ACA1_295870	mRNA	ACA1_295870	NW_004457712.1	1248984	1249364	R	ACA1_295870	complement(<1248984..>1249364)	Acanthamoeba castellanii str. Neff	14926559
ACA1_295880	mRNA	ACA1_295880	NW_004457712.1	1249766	1252854	D	ACA1_295880	join(<1249766..1249885,1250038..1250199,1250304..1250439,1250557..1250622,1250694..1250767,1250847..1250924,1251028..1251170,1251266..1251422,1251585..1251755,1251837..1251974,1252078..1252329,1252402..1252585,1252688..>1252854)	Acanthamoeba castellanii str. Neff	14926560
ACA1_295890	mRNA	ACA1_295890	NW_004457712.1	1253104	1255557	D	ACA1_295890	join(<1253104..1253277,1253390..1253459,1253579..1253693,1253782..1253899,1253948..1254373,1254442..1254583,1254642..1254788,1254899..1254974,1255086..1255264,1255346..>1255557)	Acanthamoeba castellanii str. Neff	14926561
ACA1_295900	mRNA	ACA1_295900	NW_004457712.1	1256481	1257048	R	ACA1_295900	complement(join(<1256481..1256596,1256658..>1257048))	Acanthamoeba castellanii str. Neff	14926562
ACA1_295910	mRNA	ACA1_295910	NW_004457712.1	1257207	1258780	D	ACA1_295910	join(<1257207..1257305,1257381..1257794,1257893..1258055,1258203..1258363,1258463..>1258780)	Acanthamoeba castellanii str. Neff	14926563
ACA1_295920	mRNA	ACA1_295920	NW_004457712.1	1258924	1262176	R	ACA1_295920	complement(join(<1258924..1259331,1259412..1259540,1259650..1259794,1259902..1260132,1260240..1260394,1260489..1260742,1260842..1261079,1261183..1261738,1261915..1261949,1262063..>1262176))	Acanthamoeba castellanii str. Neff	14926564
ACA1_295930	mRNA	ACA1_295930	NW_004457712.1	1262520	1262997	R	ACA1_295930	complement(join(<1262520..1262714,1262908..>1262997))	Acanthamoeba castellanii str. Neff	14926565
ACA1_295940	mRNA	ACA1_295940	NW_004457712.1	1263360	1264535	R	ACA1_295940	complement(join(<1263360..1263578,1263668..1263934,1264018..1264162,1264249..>1264535))	Acanthamoeba castellanii str. Neff	14926566
ACA1_295950	mRNA	ACA1_295950	NW_004457712.1	1265157	1266090	R	ACA1_295950	complement(join(<1265157..1265261,1265412..1265626,1265728..1265864,1265925..1266043,1266067..>1266090))	Acanthamoeba castellanii str. Neff	14926567
ACA1_295960	mRNA	ACA1_295960	NW_004457712.1	1268262	1269085	D	ACA1_295960	join(<1268262..1269064,1269076..>1269085)	Acanthamoeba castellanii str. Neff	14926568
ACA1_295970	mRNA	ACA1_295970	NW_004457712.1	1269225	1271314	R	ACA1_295970	complement(join(<1269225..1269587,1269702..1269830,1269917..1270021,1270288..1270377,1270502..1270606,1270668..1270828,1270980..1271087,1271200..>1271314))	Acanthamoeba castellanii str. Neff	14926569
ACA1_295980	mRNA	ACA1_295980	NW_004457712.1	1271907	1273304	D	ACA1_295980	join(<1271907..1272059,1272150..1272893,1272999..1273141,1273232..>1273304)	Acanthamoeba castellanii str. Neff	14926570
ACA1_295990	mRNA	ACA1_295990	NW_004457712.1	1273480	1275787	R	ACA1_295990	complement(join(<1273480..1273590,1273673..1273727,1273804..1273940,1274092..1274192,1274291..1274355,1274440..1274550,1274629..1274767,1274838..1274915,1275047..1275184,1275264..1275338,1275449..1275597,1275711..>1275787))	Acanthamoeba castellanii str. Neff	14926571
ACA1_296000	mRNA	ACA1_296000	NW_004457712.1	1275840	1276555	R	ACA1_296000	complement(join(<1275840..1275937,1276034..1276070,1276150..1276301,1276429..>1276555))	Acanthamoeba castellanii str. Neff	14926572
ACA1_296010	mRNA	ACA1_296010	NW_004457712.1	1276939	1277454	D	ACA1_296010	join(<1276939..1277129,1277227..1277281,1277365..>1277454)	Acanthamoeba castellanii str. Neff	14926573
ACA1_296020	mRNA	ACA1_296020	NW_004457712.1	1278172	1279811	D	ACA1_296020	join(<1278172..1278282,1278359..1278409,1278501..1278596,1278688..1278810,1278888..1278948,1279038..1279249,1279491..>1279811)	Acanthamoeba castellanii str. Neff	14926574
ACA1_296030	mRNA	ACA1_296030	NW_004457712.1	1280310	1281498	R	ACA1_296030	complement(join(<1280310..1280574,1280634..1280677,1280765..1280857,1281121..1281174,1281342..1281468,1281479..>1281498))	Acanthamoeba castellanii str. Neff	14926575
ACA1_296040	mRNA	ACA1_296040	NW_004457712.1	1283820	1284092	R	ACA1_296040	complement(<1283820..>1284092)	Acanthamoeba castellanii str. Neff	14926576
ACA1_296050	mRNA	ACA1_296050	NW_004457712.1	1284691	1286330	R	ACA1_296050	complement(join(<1284691..1285890,1286004..>1286330))	Acanthamoeba castellanii str. Neff	14926577
ACA1_296070	mRNA	ACA1_296070	NW_004457712.1	1288677	1289148	R	ACA1_296070	complement(join(<1288677..1288940,1289071..>1289148))	Acanthamoeba castellanii str. Neff	14926579
ACA1_296080	mRNA	ACA1_296080	NW_004457712.1	1289466	1291361	R	ACA1_296080	complement(join(<1289466..1289726,1289826..1289964,1290056..1290179,1290261..1290423,1290519..1290625,1290736..1290901,1290987..>1291361))	Acanthamoeba castellanii str. Neff	14926580
ACA1_296090	mRNA	ACA1_296090	NW_004457712.1	1291561	1293808	R	ACA1_296090	complement(join(<1291561..1291691,1291787..1291881,1292027..1292129,1292226..1292278,1292353..1292412,1292507..1292577,1292673..1292874,1292973..1293139,1293251..1293333,1293412..>1293808))	Acanthamoeba castellanii str. Neff	14926581
ACA1_296100	mRNA	ACA1_296100	NW_004457712.1	1294685	1298038	D	ACA1_296100	join(<1294685..1294894,1295051..1295153,1295253..1295521,1295611..1295699,1295793..1295880,1295970..1296022,1296194..1296282,1296391..1296464,1296556..1296639,1296739..1296896,1297050..1297179,1297264..1297389,1297519..1297677,1297793..>1298038)	Acanthamoeba castellanii str. Neff	14926582
ACA1_296110	mRNA	ACA1_296110	NW_004457712.1	1298143	1299454	R	ACA1_296110	complement(join(<1298143..1298314,1298424..1298503,1298594..1298692,1298821..1298924,1299010..1299095,1299182..1299265,1299375..>1299454))	Acanthamoeba castellanii str. Neff	14926583
ACA1_296120	mRNA	ACA1_296120	NW_004457712.1	1299871	1301043	D	ACA1_296120	join(<1299871..1300020,1300388..1300456,1300507..1300546,1300662..1300741,1300873..>1301043)	Acanthamoeba castellanii str. Neff	14926584
ACA1_296230	mRNA	ACA1_296230	NW_004457712.1	1301268	1302831	D	ACA1_296230	join(<1301268..1301498,1301659..>1302831)	Acanthamoeba castellanii str. Neff	14926585
ACA1_296240	mRNA	ACA1_296240	NW_004457712.1	1302998	1305187	R	ACA1_296240	complement(join(<1302998..1303223,1303316..1303421,1303520..1303586,1303672..1303889,1303980..1304096,1304183..1304383,1304530..>1305187))	Acanthamoeba castellanii str. Neff	14926586
ACA1_296250	mRNA	ACA1_296250	NW_004457712.1	1305799	1307065	D	ACA1_296250	join(<1305799..1305922,1306041..1306103,1306230..1306313,1306403..1306540,1306677..1306762,1306844..>1307065)	Acanthamoeba castellanii str. Neff	14926587
ACA1_296260	mRNA	ACA1_296260	NW_004457712.1	1307379	1308399	D	ACA1_296260	join(<1307379..1308042,1308116..1308186,1308256..>1308399)	Acanthamoeba castellanii str. Neff	14926588
ACA1_296270	mRNA	ACA1_296270	NW_004457712.1	1308547	1310946	R	ACA1_296270	complement(join(<1308547..1308665,1308778..1308894,1308979..1309137,1309236..1309335,1309707..1309796,1309858..1310065,1310167..1310273,1310410..1310637,1310875..>1310946))	Acanthamoeba castellanii str. Neff	14926589
ACA1_296280	mRNA	ACA1_296280	NW_004457712.1	1311274	1314355	D	ACA1_296280	join(<1311274..1312153,1312240..1312320,1312397..1312485,1312580..1312681,1312776..1312901,1313016..1313132,1313192..1313245,1313358..1313399,1313487..1313574,1313674..1313753,1313834..1313917,1314018..1314122,1314191..>1314355)	Acanthamoeba castellanii str. Neff	14926590
ACA1_296290	mRNA	ACA1_296290	NW_004457712.1	1314450	1316605	D	ACA1_296290	join(<1314450..1314582,1314762..1314854,1314933..1315010,1315096..1315157,1315306..1315374,1315461..1315568,1315682..1315897,1315989..1316087,1316178..1316337,1316415..>1316605)	Acanthamoeba castellanii str. Neff	14926591
ACA1_296300	mRNA	ACA1_296300	NW_004457712.1	1316699	1317611	D	ACA1_296300	join(<1316699..1316769,1316904..1317049,1317140..1317306,1317399..>1317611)	Acanthamoeba castellanii str. Neff	14926592
ACA1_296310	mRNA	ACA1_296310	NW_004457712.1	1317925	1319687	D	ACA1_296310	join(<1317925..1318006,1318086..1318171,1318242..1318337,1318502..1318646,1318726..1318932,1319025..1319165,1319240..1319309,1319417..1319547,1319653..>1319687)	Acanthamoeba castellanii str. Neff	14926593
ACA1_296320	mRNA	ACA1_296320	NW_004457712.1	1320428	1321220	D	ACA1_296320	join(<1320428..1321026,1321100..>1321220)	Acanthamoeba castellanii str. Neff	14926594
ACA1_296330	mRNA	ACA1_296330	NW_004457712.1	1321980	1323480	D	ACA1_296330	join(<1321980..1322129,1322246..1322398,1322497..1322721,1322816..1322891,1322968..1323035,1323127..1323248,1323351..>1323480)	Acanthamoeba castellanii str. Neff	14926595
ACA1_296340	mRNA	ACA1_296340	NW_004457712.1	1324059	1324607	D	ACA1_296340	join(<1324059..1324312,1324445..>1324607)	Acanthamoeba castellanii str. Neff	14926596
ACA1_296350	mRNA	ACA1_296350	NW_004457712.1	1325016	1326728	D	ACA1_296350	join(<1325016..1325533,1325618..1325662,1325814..1325871,1325949..1326146,1326234..1326516,1326613..>1326728)	Acanthamoeba castellanii str. Neff	14926597
ACA1_296360	mRNA	ACA1_296360	NW_004457712.1	1326941	1328839	R	ACA1_296360	complement(join(<1326941..1327017,1327104..1327201,1327303..1327444,1327535..1327636,1327739..1327866,1327965..1328074,1328349..1328492,1328567..>1328839))	Acanthamoeba castellanii str. Neff	14926598
ACA1_296370	mRNA	ACA1_296370	NW_004457712.1	1328901	1329399	D	ACA1_296370	join(<1328901..1328994,1329068..1329118,1329200..>1329399)	Acanthamoeba castellanii str. Neff	14926599
ACA1_296380	mRNA	ACA1_296380	NW_004457712.1	1329606	1333053	R	ACA1_296380	complement(join(<1329606..1329706,1329824..1330058,1330161..1330273,1330372..1330553,1330640..1330791,1330869..1330974,1331059..1331371,1331435..1331510,1331574..1332186,1332260..1332521,1332585..1332682,1332743..>1333053))	Acanthamoeba castellanii str. Neff	14926600
ACA1_296390	mRNA	ACA1_296390	NW_004457712.1	1333007	1334169	D	ACA1_296390	join(<1333007..1333066,1333142..1333278,1333380..1333485,1333627..1333715,1333788..1333866,1333969..>1334169)	Acanthamoeba castellanii str. Neff	14926602
ACA1_296400	mRNA	ACA1_296400	NW_004457712.1	1334276	1335010	R	ACA1_296400	complement(<1334276..>1335010)	Acanthamoeba castellanii str. Neff	14926601
ACA1_296410	mRNA	ACA1_296410	NW_004457712.1	1335291	1338224	D	ACA1_296410	join(<1335291..1335370,1335478..1335650,1335754..1336608,1336695..1338000,1338101..>1338224)	Acanthamoeba castellanii str. Neff	14926603
ACA1_296420	mRNA	ACA1_296420	NW_004457712.1	1338966	1339365	D	ACA1_296420	join(<1338966..1339063,1339122..>1339365)	Acanthamoeba castellanii str. Neff	14926604
ACA1_296430	mRNA	ACA1_296430	NW_004457712.1	1344367	1345923	R	ACA1_296430	complement(join(<1344367..1344424,1344517..1344939,1345095..1345263,1345298..1345435,1345539..>1345923))	Acanthamoeba castellanii str. Neff	14926605
ACA1_296440	mRNA	ACA1_296440	NW_004457712.1	1346430	1347706	D	ACA1_296440	join(<1346430..1346513,1346595..1346667,1346754..1346839,1346990..1347053,1347133..1347275,1347361..1347480,1347569..>1347706)	Acanthamoeba castellanii str. Neff	14926606
ACA1_296450	mRNA	ACA1_296450	NW_004457712.1	1347750	1348716	D	ACA1_296450	join(<1347750..1347836,1347917..1347976,1348039..1348156,1348225..1348343,1348410..1348488,1348592..>1348716)	Acanthamoeba castellanii str. Neff	14926607
ACA1_296460	mRNA	ACA1_296460	NW_004457712.1	1348959	1350981	D	ACA1_296460	join(<1348959..1349109,1349242..1349298,1349350..1349564,1349657..1349739,1349846..1349952,1349970..1350056,1350073..1350164,1350269..1350430,1350503..1350599,1350722..1350812,1350897..>1350981)	Acanthamoeba castellanii str. Neff	14926608
ACA1_296470	mRNA	ACA1_296470	NW_004457712.1	1351242	1353181	D	ACA1_296470	join(<1351242..1351534,1351698..1351867,1351960..1352059,1352170..1352267,1352333..1352471,1352575..1352659,1352811..1352925,1353036..>1353181)	Acanthamoeba castellanii str. Neff	14926609
ACA1_296480	mRNA	ACA1_296480	NW_004457712.1	1357382	1358999	R	ACA1_296480	complement(join(<1357382..1357543,1357652..1357738,1357826..1357891,1357971..1358056,1358203..1358287,1358411..1358454,1358530..1358673,1358855..>1358999))	Acanthamoeba castellanii str. Neff	14926610
ACA1_296490	mRNA	ACA1_296490	NW_004457712.1	1359161	1361612	R	ACA1_296490	complement(join(<1359161..1359235,1359324..1359436,1359535..1359631,1359707..1359795,1359868..1360083,1360181..1360289,1360374..1360507,1360648..1360747,1360816..1360906,1361006..1361099,1361183..1361339,1361499..>1361612))	Acanthamoeba castellanii str. Neff	14926611
ACA1_296500	mRNA	ACA1_296500	NW_004457712.1	1361943	1364217	D	ACA1_296500	join(<1361943..1362253,1362313..1362613,1362739..1362813,1362909..1363094,1363135..1363234,1363307..1363502,1363580..1363709,1363804..>1364217)	Acanthamoeba castellanii str. Neff	14926612
ACA1_296510	mRNA	ACA1_296510	NW_004457712.1	1364758	1371413	D	ACA1_296510	join(<1364758..1364821,1364903..1365005,1365174..1365234,1365320..1365454,1365510..1365779,1365883..1366536,1366620..1366868,1366939..1367082,1367154..1367289,1367377..1367524,1367593..1367843,1367940..1368199,1368266..1368382,1368455..1368551,1368644..1368905,1368982..1369997,1370120..1370578,1370704..1370909,1370994..>1371413)	Acanthamoeba castellanii str. Neff	14926613
ACA1_296520	mRNA	ACA1_296520	NW_004457712.1	1371457	1373877	R	ACA1_296520	complement(join(<1371457..1371893,1372027..1372300,1372378..1372704,1372825..1372871,1372998..1373132,1373245..1373425,1373535..1373675,1373791..>1373877))	Acanthamoeba castellanii str. Neff	14926614
ACA1_296530	mRNA	ACA1_296530	NW_004457712.1	1374521	1377754	R	ACA1_296530	complement(join(<1374521..1374632,1374719..1374870,1374951..1375071,1375137..1375286,1375355..1375437,1375543..1375703,1375861..1375969,1376050..1376159,1376312..1376351,1376489..1376563,1376682..1376737,1376823..1376930,1377063..1377105,1377185..1377249,1377382..1377489,1377580..>1377754))	Acanthamoeba castellanii str. Neff	14926615
ACA1_296540	mRNA	ACA1_296540	NW_004457712.1	1378726	1379177	R	ACA1_296540	complement(join(<1378726..1378904,1378979..>1379177))	Acanthamoeba castellanii str. Neff	14926616
ACA1_296550	mRNA	ACA1_296550	NW_004457712.1	1379756	1382258	D	ACA1_296550	join(<1379756..1380115,1380208..1380372,1380507..1380590,1380670..1380790,1380881..1380988,1381085..1381174,1381350..1381450,1381581..1382098,1382186..>1382258)	Acanthamoeba castellanii str. Neff	14926617
ACA1_296560	mRNA	ACA1_296560	NW_004457712.1	1382427	1385507	R	ACA1_296560	complement(join(<1382427..1382605,1382717..1382902,1383029..1383422,1383505..1383740,1383823..1384049,1384183..1384360,1384422..1384581,1384738..1384956,1385166..>1385507))	Acanthamoeba castellanii str. Neff	14926618
ACA1_296570	mRNA	ACA1_296570	NW_004457712.1	1386006	1386962	D	ACA1_296570	join(<1386006..1386012,1386168..1386317,1386386..1386553,1386633..1386723,1386821..>1386962)	Acanthamoeba castellanii str. Neff	14926619
ACA1_296580	mRNA	ACA1_296580	NW_004457712.1	1387162	1389758	R	ACA1_296580	complement(join(<1387162..1387451,1387577..1387832,1387964..1388038,1388134..1388276,1388371..1388548,1388650..1388708,1388798..1388978,1389082..1389237,1389354..>1389758))	Acanthamoeba castellanii str. Neff	14926620
ACA1_296610	mRNA	ACA1_296610	NW_004457712.1	1404678	1405545	R	ACA1_296610	complement(join(<1404678..1404805,1404895..1404988,1405080..1405222,1405311..>1405545))	Acanthamoeba castellanii str. Neff	14926623
ACA1_296720	mRNA	ACA1_296720	NW_004457712.1	1408608	1410486	R	ACA1_296720	complement(join(<1408608..1408630,1409064..1409406,1409484..1409764,1409871..1409945,1410065..1410295,1410453..>1410486))	Acanthamoeba castellanii str. Neff	14926624
ACA1_296830	mRNA	ACA1_296830	NW_004457712.1	1410788	1412851	D	ACA1_296830	join(<1410788..1410920,1410989..1411062,1411156..1411551,1411622..1411858,1411949..1412113,1412205..1412342,1412442..1412631,1412718..>1412851)	Acanthamoeba castellanii str. Neff	14926625
ACA1_296840	mRNA	ACA1_296840	NW_004457712.1	1413536	1415190	D	ACA1_296840	join(<1413536..1413823,1413927..1414108,1414183..1414254,1414412..1414523,1414662..1414722,1414824..1414921,1415164..>1415190)	Acanthamoeba castellanii str. Neff	14926626
ACA1_296850	mRNA	ACA1_296850	NW_004457712.1	1415488	1416925	D	ACA1_296850	join(<1415488..1415608,1415665..1415734,1416133..1416238,1416298..1416411,1416508..1416618,1416722..>1416925)	Acanthamoeba castellanii str. Neff	14926627
ACA1_296860	mRNA	ACA1_296860	NW_004457712.1	1417081	1418739	D	ACA1_296860	join(<1417081..1417398,1417492..1417633,1417727..>1418739)	Acanthamoeba castellanii str. Neff	14926628
ACA1_296880	mRNA	ACA1_296880	NW_004457712.1	1421582	1422722	R	ACA1_296880	complement(join(<1421582..1421714,1421790..1421884,1421991..1422145,1422200..1422380,1422444..1422587,1422666..>1422722))	Acanthamoeba castellanii str. Neff	14926630
ACA1_296890	mRNA	ACA1_296890	NW_004457712.1	1422961	1427598	D	ACA1_296890	join(<1422961..1424289,1424604..1424961,1425052..1425200,1425265..1425415,1425522..1425590,1425676..1426754,1426845..1427324,1427422..>1427598)	Acanthamoeba castellanii str. Neff	14926631
ACA1_296900	mRNA	ACA1_296900	NW_004457712.1	1429087	1431025	D	ACA1_296900	join(<1429087..1430175,1430249..1430356,1430438..1430464,1430948..>1431025)	Acanthamoeba castellanii str. Neff	14926632
ACA1_296910	mRNA	ACA1_296910	NW_004457712.1	1431418	1433355	R	ACA1_296910	complement(join(<1431418..1431729,1431740..1432308,1432396..1433053,1433182..>1433355))	Acanthamoeba castellanii str. Neff	14926633
ACA1_296920	mRNA	ACA1_296920	NW_004457712.1	1433746	1435639	D	ACA1_296920	join(<1433746..1434204,1434322..1434525,1434615..1434816,1434883..1435037,1435107..1435382,1435475..>1435639)	Acanthamoeba castellanii str. Neff	14926634
ACA1_296930	mRNA	ACA1_296930	NW_004457712.1	1436046	1439406	D	ACA1_296930	join(<1436046..1436141,1436249..1436374,1436480..1436633,1436711..1436876,1437017..1437219,1437368..1437466,1437587..1437876,1438013..1438176,1438276..1438384,1438511..1438630,1438720..1438907,1439017..1439137,1439254..>1439406)	Acanthamoeba castellanii str. Neff	14926635
ACA1_296950	mRNA	ACA1_296950	NW_004457712.1	1443492	1446796	R	ACA1_296950	complement(join(<1443492..1443658,1443746..1443804,1443873..1443936,1444031..1444108,1444267..1444416,1444586..1444670,1444792..1444927,1445140..1445264,1445378..1445457,1445581..1445643,1445917..1446343,1446434..1446464,1446572..1446686,1446763..>1446796))	Acanthamoeba castellanii str. Neff	14926637
ACA1_296960	mRNA	ACA1_296960	NW_004457712.1	1447027	1450261	R	ACA1_296960	complement(join(<1447027..1447263,1447362..1447505,1447608..1447781,1447867..1447983,1448393..1448695,1448727..1448908,1448980..1449109,1449134..>1450261))	Acanthamoeba castellanii str. Neff	14926638
ACA1_296970	mRNA	ACA1_296970	NW_004457712.1	1450452	1452078	R	ACA1_296970	complement(join(<1450452..1450600,1450707..1450790,1450956..1451117,1451188..1451235,1451315..1451419,1451489..1451620,1451694..1451782,1451873..>1452078))	Acanthamoeba castellanii str. Neff	14926639
ACA1_296980	mRNA	ACA1_296980	NW_004457712.1	1452309	1453523	R	ACA1_296980	complement(join(<1452309..1452473,1452557..1452761,1452874..1453028,1453203..>1453523))	Acanthamoeba castellanii str. Neff	14926640
ACA1_297090	mRNA	ACA1_297090	NW_004457712.1	1453645	1454689	R	ACA1_297090	complement(join(<1453645..1453876,1453966..1454049,1454209..1454370,1454443..1454490,1454574..>1454689))	Acanthamoeba castellanii str. Neff	14926641
ACA1_109690	mRNA	ACA1_109690	NW_004457710.1	420	2393	D	ACA1_109690	join(<420..480,578..655,760..962,1092..1185,1266..1303,1589..1650,2052..2118,2238..>2393)	Acanthamoeba castellanii str. Neff	14926083
ACA1_109700	mRNA	ACA1_109700	NW_004457710.1	3674	4554	R	ACA1_109700	complement(join(<3674..3691,3747..3853,4149..4181,4280..4380,4529..>4554))	Acanthamoeba castellanii str. Neff	14926027
ACA1_109710	mRNA	ACA1_109710	NW_004457710.1	4629	7078	D	ACA1_109710	join(<4629..4938,5088..5198,5320..5510,5603..5899,5952..6029,6134..6227,6325..6472,6543..6947,7012..>7078)	Acanthamoeba castellanii str. Neff	14926028
ACA1_109720	mRNA	ACA1_109720	NW_004457710.1	7400	9142	R	ACA1_109720	complement(join(<7400..8386,8533..8715,8777..8846,8942..9044,9133..>9142))	Acanthamoeba castellanii str. Neff	14926029
ACA1_109730	mRNA	ACA1_109730	NW_004457710.1	9446	13283	R	ACA1_109730	complement(join(<9446..10303,10428..10678,10798..11089,11207..11257,11346..11630,11734..11958,12041..12281,12384..12984,13077..13183,13261..>13283))	Acanthamoeba castellanii str. Neff	14926030
ACA1_109740	mRNA	ACA1_109740	NW_004457710.1	13727	17100	R	ACA1_109740	complement(join(<13727..13963,14067..14195,14269..14387,14464..14679,14798..14873,14987..15113,15201..15415,15486..15776,15848..15964,16216..16277,16354..16399,16580..16713,16833..>17100))	Acanthamoeba castellanii str. Neff	14926031
ACA1_109750	mRNA	ACA1_109750	NW_004457710.1	17375	18618	R	ACA1_109750	complement(join(<17375..17553,17666..17753,17882..17929,18028..18117,18207..18326,18422..18483,18555..>18618))	Acanthamoeba castellanii str. Neff	14926032
ACA1_109760	mRNA	ACA1_109760	NW_004457710.1	18985	20128	R	ACA1_109760	complement(join(<18985..19317,19408..19667,19678..19747,19836..19928,19960..20050,20100..>20128))	Acanthamoeba castellanii str. Neff	14926033
ACA1_109770	mRNA	ACA1_109770	NW_004457710.1	20587	23455	D	ACA1_109770	join(<20587..20682,20778..20833,20988..21117,21358..21593,21770..21862,22022..22080,22222..22249,22431..22620,22714..22809,22976..23063,23193..23278,23363..>23455)	Acanthamoeba castellanii str. Neff	14926034
ACA1_109780	mRNA	ACA1_109780	NW_004457710.1	23492	26708	R	ACA1_109780	complement(join(<23492..23566,23662..23817,23959..24202,24289..24463,24672..24731,24808..24917,25077..25203,25304..25393,25563..26356,26500..>26708))	Acanthamoeba castellanii str. Neff	14926035
ACA1_109790	mRNA	ACA1_109790	NW_004457710.1	27289	31108	D	ACA1_109790	join(<27289..27597,27765..27805,27922..28021,28188..28211,28224..28463,28603..28642,28803..28867,29029..29365,29542..30203,30460..30640,30737..30799,30915..>31108)	Acanthamoeba castellanii str. Neff	14926036
ACA1_109800	mRNA	ACA1_109800	NW_004457710.1	31257	33485	R	ACA1_109800	complement(join(<31257..31415,31600..32079,32197..32312,32551..32758,32920..32990,33181..33290,33388..>33485))	Acanthamoeba castellanii str. Neff	14926037
ACA1_109810	mRNA	ACA1_109810	NW_004457710.1	33718	34756	D	ACA1_109810	join(<33718..33787,34039..34208,34437..34584,34701..>34756)	Acanthamoeba castellanii str. Neff	14926038
ACA1_109920	mRNA	ACA1_109920	NW_004457710.1	35326	37514	R	ACA1_109920	complement(join(<35326..35435,35522..35675,35752..35934,36145..36921,37130..37271,37408..>37514))	Acanthamoeba castellanii str. Neff	14926039
ACA1_110040	mRNA	ACA1_110040	NW_004457710.1	42198	43836	D	ACA1_110040	join(<42198..42547,42666..42742,42930..43026,43100..43192,43341..43433,43579..43619,43715..>43836)	Acanthamoeba castellanii str. Neff	14926041
ACA1_110050	mRNA	ACA1_110050	NW_004457710.1	44524	45323	D	ACA1_110050	join(<44524..44937,45066..>45323)	Acanthamoeba castellanii str. Neff	14926042
ACA1_110060	mRNA	ACA1_110060	NW_004457710.1	47558	50960	R	ACA1_110060	complement(join(<47558..47698,47763..47839,47921..48113,48185..48362,48470..48614,48705..48864,48973..49091,49167..49257,49405..49517,49646..49829,49874..50236,50312..50405,50518..50654,50727..50830,50918..>50960))	Acanthamoeba castellanii str. Neff	14926043
ACA1_110070	mRNA	ACA1_110070	NW_004457710.1	51419	53933	D	ACA1_110070	join(<51419..51478,51642..52139,52280..52429,52648..52998,53269..53499,53685..53805,53881..>53933)	Acanthamoeba castellanii str. Neff	14926044
ACA1_110080	mRNA	ACA1_110080	NW_004457710.1	54299	54822	R	ACA1_110080	complement(join(<54299..54439,54718..>54822))	Acanthamoeba castellanii str. Neff	14926045
ACA1_110090	mRNA	ACA1_110090	NW_004457710.1	57180	58997	D	ACA1_110090	join(<57180..57254,57279..>58997)	Acanthamoeba castellanii str. Neff	14926046
ACA1_110100	mRNA	ACA1_110100	NW_004457710.1	59285	64427	R	ACA1_110100	complement(join(<59285..60677,60798..60937,61118..61312,61470..61701,61852..62069,62201..62398,62535..62699,62796..62933,63045..63149,63340..63473,63573..63653,63773..63810,63923..64125,64302..>64427))	Acanthamoeba castellanii str. Neff	14926047
ACA1_110110	mRNA	ACA1_110110	NW_004457710.1	64763	67917	D	ACA1_110110	join(<64763..64967,65268..65339,65562..65639,65810..65937,66146..66214,66445..66543,66707..66843,67010..67078,67401..>67917)	Acanthamoeba castellanii str. Neff	14926048
ACA1_110120	mRNA	ACA1_110120	NW_004457710.1	68880	69635	D	ACA1_110120	join(<68880..69095,69180..69316,69423..69563,69596..>69635)	Acanthamoeba castellanii str. Neff	14926049
ACA1_110130	mRNA	ACA1_110130	NW_004457710.1	69993	72024	R	ACA1_110130	complement(join(<69993..70202,70338..70458,70492..70570,70718..70763,70919..71002,71187..71372,71486..71704,71776..>72024))	Acanthamoeba castellanii str. Neff	14926050
ACA1_110140	mRNA	ACA1_110140	NW_004457710.1	72418	74341	R	ACA1_110140	complement(join(<72418..72782,73432..73668,73798..>74341))	Acanthamoeba castellanii str. Neff	14926051
ACA1_110250	mRNA	ACA1_110250	NW_004457710.1	74471	77542	R	ACA1_110250	complement(join(<74471..74641,74744..74941,75170..75273,75391..75438,75625..75706,75820..75917,76140..76214,76309..76340,76421..76661,76755..76982,77089..77224,77315..77458,77534..>77542))	Acanthamoeba castellanii str. Neff	14926052
ACA1_110260	mRNA	ACA1_110260	NW_004457710.1	77728	78318	D	ACA1_110260	<77728..>78318	Acanthamoeba castellanii str. Neff	14926053
ACA1_110270	mRNA	ACA1_110270	NW_004457710.1	78714	80165	R	ACA1_110270	complement(<78714..>80165)	Acanthamoeba castellanii str. Neff	14926054
ACA1_110280	mRNA	ACA1_110280	NW_004457710.1	81311	83825	R	ACA1_110280	complement(join(<81311..81370,81485..81589,81699..81866,82012..82080,82252..82395,82570..82649,82732..82949,83052..83193,83295..83430,83513..83641,83724..>83825))	Acanthamoeba castellanii str. Neff	14926055
ACA1_110290	mRNA	ACA1_110290	NW_004457710.1	84369	84779	D	ACA1_110290	join(<84369..84603,84670..>84779)	Acanthamoeba castellanii str. Neff	14926056
ACA1_110300	mRNA	ACA1_110300	NW_004457710.1	84920	87316	D	ACA1_110300	join(<84920..85307,85510..85678,85764..85878,85988..86102,86199..86318,86396..86555,86647..86737,86834..>87316)	Acanthamoeba castellanii str. Neff	14926057
ACA1_110310	mRNA	ACA1_110310	NW_004457710.1	87448	88976	R	ACA1_110310	complement(join(<87448..87615,87724..87875,87946..88138,88241..88331,88405..88524,88709..88787,88862..>88976))	Acanthamoeba castellanii str. Neff	14926058
ACA1_110320	mRNA	ACA1_110320	NW_004457710.1	88891	92026	D	ACA1_110320	join(<88891..88995,89418..89507,89623..90009,90113..90323,90411..90982,91117..91206,91321..91471,91605..91749,91846..>92026)	Acanthamoeba castellanii str. Neff	14926060
ACA1_110330	mRNA	ACA1_110330	NW_004457710.1	92275	94783	D	ACA1_110330	join(<92275..92724,92834..92927,93095..93285,93421..93498,93577..93694,93791..93957,94081..94148,94239..94634,94717..>94783)	Acanthamoeba castellanii str. Neff	14926059
ACA1_110340	mRNA	ACA1_110340	NW_004457710.1	94964	96766	D	ACA1_110340	join(<94964..95430,95457..96241,96322..96397,96483..96542,96655..>96766)	Acanthamoeba castellanii str. Neff	14926061
ACA1_110350	mRNA	ACA1_110350	NW_004457710.1	96902	104445	R	ACA1_110350	complement(join(<96902..96982,97117..97960,98071..98235,98320..98420,98502..98703,98774..98864,98952..99392,99511..99625,99771..99942,100034..100154,100243..100285,100367..100539,100699..100853,100939..101064,101137..101204,101378..101477,101578..101647,101729..101970,102058..102790,102912..103953,104047..>104445))	Acanthamoeba castellanii str. Neff	14926062
ACA1_110370	mRNA	ACA1_110370	NW_004457710.1	105978	106517	R	ACA1_110370	complement(<105978..>106517)	Acanthamoeba castellanii str. Neff	14926064
ACA1_110390	mRNA	ACA1_110390	NW_004457710.1	107638	108926	D	ACA1_110390	join(<107638..107838,107966..108048,108143..108234,108406..108521,108655..108738,108840..>108926)	Acanthamoeba castellanii str. Neff	14926066
ACA1_110400	mRNA	ACA1_110400	NW_004457710.1	109495	112965	D	ACA1_110400	join(<109495..109498,109646..109842,109959..110115,110275..110648,110745..110840,111014..111140,111199..111299,111396..111473,111571..111761,111908..111926,112025..112129,112267..>112965)	Acanthamoeba castellanii str. Neff	14926067
ACA1_110410	mRNA	ACA1_110410	NW_004457710.1	113150	114879	R	ACA1_110410	complement(join(<113150..113242,113329..113427,113516..114297,114410..114556,114611..114671,114769..>114879))	Acanthamoeba castellanii str. Neff	14926068
ACA1_110420	mRNA	ACA1_110420	NW_004457710.1	115590	120403	D	ACA1_110420	join(<115590..115646,115732..115860,115957..116131,116230..116327,116412..116647,116732..116832,116993..117288,117358..117423,117562..117660,117759..117928,118053..118284,118346..>120403)	Acanthamoeba castellanii str. Neff	14926069
ACA1_110430	mRNA	ACA1_110430	NW_004457710.1	120412	124101	R	ACA1_110430	complement(join(<120412..120676,120750..120868,120953..121059,121395..121545,121636..121752,121861..121980,122084..122185,122267..122497,122601..122939,123048..123167,123254..123303,123398..123437,123555..123809,124030..>124101))	Acanthamoeba castellanii str. Neff	14926070
ACA1_110440	mRNA	ACA1_110440	NW_004457710.1	124510	127713	R	ACA1_110440	complement(join(<124510..125478,125567..125705,125769..125875,125954..126071,126279..126399,126465..126629,126702..126796,126869..126968,127079..127174,127251..>127713))	Acanthamoeba castellanii str. Neff	14926071
ACA1_110450	mRNA	ACA1_110450	NW_004457710.1	128167	129401	R	ACA1_110450	complement(join(<128167..129165,129309..>129401))	Acanthamoeba castellanii str. Neff	14926072
ACA1_110460	mRNA	ACA1_110460	NW_004457710.1	130376	132167	D	ACA1_110460	join(<130376..130385,130424..130528,130622..130684,130801..131291,131365..131483,131572..131686,131849..131908,131985..>132167)	Acanthamoeba castellanii str. Neff	14926073
ACA1_110470	mRNA	ACA1_110470	NW_004457710.1	133172	134439	D	ACA1_110470	join(<133172..133279,133372..133899,133979..134111,134180..>134439)	Acanthamoeba castellanii str. Neff	14926074
ACA1_110480	mRNA	ACA1_110480	NW_004457710.1	134497	135618	D	ACA1_110480	join(<134497..134526,134702..134842,135041..135066,135118..135178,135296..135478,135544..>135618)	Acanthamoeba castellanii str. Neff	14926075
ACA1_110490	mRNA	ACA1_110490	NW_004457710.1	136361	139003	R	ACA1_110490	complement(join(<136361..137140,137263..137518,137720..137834,137959..138064,138134..138178,138313..138479,138558..138706,138799..138845,138935..>139003))	Acanthamoeba castellanii str. Neff	14926076
ACA1_110500	mRNA	ACA1_110500	NW_004457710.1	139416	140792	D	ACA1_110500	join(<139416..140017,140100..140301,140401..140480,140600..>140792)	Acanthamoeba castellanii str. Neff	14926077
ACA1_110510	mRNA	ACA1_110510	NW_004457710.1	140947	144964	D	ACA1_110510	join(<140947..141176,141263..141410,141499..141578,141671..141828,141928..142056,142156..142330,142454..142565,142637..142756,142974..143191,143403..143493,143589..143710,143792..143838,143868..144305,144408..144604,144674..>144964)	Acanthamoeba castellanii str. Neff	14926078
ACA1_110520	mRNA	ACA1_110520	NW_004457710.1	145038	147144	R	ACA1_110520	complement(join(<145038..145274,145309..>147144))	Acanthamoeba castellanii str. Neff	14926079
ACA1_110530	mRNA	ACA1_110530	NW_004457710.1	147346	147576	D	ACA1_110530	<147346..>147576	Acanthamoeba castellanii str. Neff	14926080
ACA1_110540	mRNA	ACA1_110540	NW_004457710.1	148165	151328	R	ACA1_110540	complement(join(<148165..148403,148485..148614,150723..150836,150918..151019,151122..>151328))	Acanthamoeba castellanii str. Neff	14926081
ACA1_110750	mRNA	ACA1_110750	NW_004457710.1	153535	155160	D	ACA1_110750	join(<153535..153695,153777..153876,153950..154021,154095..154707,154809..>155160)	Acanthamoeba castellanii str. Neff	14926082
ACA1_030720	mRNA	ACA1_030720	NW_004457709.1	9838	10533	D	ACA1_030720	<9838..>10533	Acanthamoeba castellanii str. Neff	14926026
ACA1_030730	mRNA	ACA1_030730	NW_004457709.1	10635	15202	D	ACA1_030730	join(<10635..11248,11322..11444,11522..11573,11657..11781,11856..12481,12573..12625,12714..12950,13023..13227,13307..13387,13468..13562,13666..13763,13850..13968,14049..14151,14239..14399,14479..14545,14629..14752,14873..15024,15106..>15202)	Acanthamoeba castellanii str. Neff	14926017
ACA1_030740	mRNA	ACA1_030740	NW_004457709.1	15514	18860	R	ACA1_030740	complement(join(<15514..15893,15976..16186,16282..16856,16952..17039,17151..17239,17349..17492,17591..17653,17743..17825,17921..17981,18086..18161,18278..18424,18579..>18860))	Acanthamoeba castellanii str. Neff	14926018
ACA1_030750	mRNA	ACA1_030750	NW_004457709.1	19086	19832	D	ACA1_030750	join(<19086..19194,19271..19388,19465..19510,19577..19684,19761..>19832)	Acanthamoeba castellanii str. Neff	14926019
ACA1_030760	mRNA	ACA1_030760	NW_004457709.1	19972	20810	D	ACA1_030760	join(<19972..20002,20149..20451,20569..>20810)	Acanthamoeba castellanii str. Neff	14926020
ACA1_030770	mRNA	ACA1_030770	NW_004457709.1	21671	23777	D	ACA1_030770	join(<21671..21775,21868..21963,22049..22141,22223..22375,22444..22578,22625..22717,22794..22866,22948..23028,23109..23256,23342..23462,23532..>23777)	Acanthamoeba castellanii str. Neff	14926021
ACA1_030780	mRNA	ACA1_030780	NW_004457709.1	23902	33201	R	ACA1_030780	complement(join(<23902..24112,24187..24272,24429..24556,24669..24763,24848..25000,25111..25205,25287..25376,25498..25601,25736..25941,26043..26173,26248..26420,26497..27255,27365..27470,27576..27652,27730..27846,27916..28190,28281..28441,28504..28589,28652..28956,29029..29117,29198..29309,29393..29451,29796..29916,30210..30299,30364..30517,30590..30815,30895..30982,31055..31112,31337..31432,31503..31694,31772..31876,31972..32062,32141..32268,32363..32531,32613..32682,32766..32845,32909..32961,33030..>33201))	Acanthamoeba castellanii str. Neff	14926022
ACA1_030790	mRNA	ACA1_030790	NW_004457709.1	34445	35295	D	ACA1_030790	join(<34445..34581,34711..34758,34969..35151,35220..>35295)	Acanthamoeba castellanii str. Neff	14926023
ACA1_030800	mRNA	ACA1_030800	NW_004457709.1	35401	38052	D	ACA1_030800	join(<35401..36051,36136..36342,36427..36621,36706..36905,37007..37082,37164..37392,37461..37678,37744..>38052)	Acanthamoeba castellanii str. Neff	14926024
ACA1_030810	mRNA	ACA1_030810	NW_004457709.1	38396	39264	D	ACA1_030810	join(<38396..38697,38879..39054,39164..>39264)	Acanthamoeba castellanii str. Neff	14926025
ACA1_301530	mRNA	ACA1_301530	NW_004457707.1	228	1975	R	ACA1_301530	complement(join(<228..773,843..1024,1095..1211,1295..1406,1502..1722,1753..>1975))	Acanthamoeba castellanii str. Neff	14926016
ACA1_301540	mRNA	ACA1_301540	NW_004457707.1	2177	3230	R	ACA1_301540	complement(join(<2177..2384,2509..2583,2662..2742,2814..2904,2990..>3230))	Acanthamoeba castellanii str. Neff	14926000
ACA1_301550	mRNA	ACA1_301550	NW_004457707.1	3420	9208	D	ACA1_301550	join(<3420..3473,3663..3939,4046..4199,4292..4369,4457..4581,4675..4787,4891..5409,5483..5627,5694..5788,5910..6100,6199..6379,6547..6894,7001..7169,7259..7355,7446..7484,7573..7674,7786..7912,7988..8097,8281..8353,8450..8569,8665..8812,8918..9028,9132..>9208)	Acanthamoeba castellanii str. Neff	14926001
ACA1_301560	mRNA	ACA1_301560	NW_004457707.1	9465	10250	D	ACA1_301560	join(<9465..9657,9760..9836,9900..9981,10018..>10250)	Acanthamoeba castellanii str. Neff	14926002
ACA1_301570	mRNA	ACA1_301570	NW_004457707.1	10412	11010	R	ACA1_301570	complement(join(<10412..10459,10522..10647,10738..10779,10888..>11010))	Acanthamoeba castellanii str. Neff	14926003
ACA1_301680	mRNA	ACA1_301680	NW_004457707.1	14569	18581	D	ACA1_301680	join(<14569..15478,15599..15684,16015..16350,16456..16699,16825..16934,17111..17200,17317..17442,17486..17498,17556..17815,17964..>18581)	Acanthamoeba castellanii str. Neff	14926004
ACA1_301690	mRNA	ACA1_301690	NW_004457707.1	18662	19651	R	ACA1_301690	complement(join(<18662..18766,18866..18938,19056..19137,19206..19266,19327..19413,19514..>19651))	Acanthamoeba castellanii str. Neff	14926005
ACA1_301700	mRNA	ACA1_301700	NW_004457707.1	20333	21256	R	ACA1_301700	complement(join(<20333..20427,20543..20653,20784..20854,20956..21077,21158..>21256))	Acanthamoeba castellanii str. Neff	14926006
ACA1_301710	mRNA	ACA1_301710	NW_004457707.1	21495	22673	R	ACA1_301710	complement(join(<21495..21632,21704..21758,21836..22027,22103..22212,22287..>22673))	Acanthamoeba castellanii str. Neff	14926007
ACA1_301720	mRNA	ACA1_301720	NW_004457707.1	23071	28761	D	ACA1_301720	join(<23071..23280,23434..23645,23956..24045,24126..24171,24241..24392,24549..24672,24761..24857,24955..25093,25199..25300,25431..25561,25628..25966,26115..26354,26430..26584,26671..26784,26875..26967,27110..27309,27418..27484,27589..27744,27855..28265,28382..28463,28526..>28761)	Acanthamoeba castellanii str. Neff	14926008
ACA1_301740	mRNA	ACA1_301740	NW_004457707.1	32472	34839	R	ACA1_301740	complement(join(<32472..32650,32744..32857,32935..33046,33121..33190,33273..33544,33638..33813,34061..34201,34331..34621,34767..>34839))	Acanthamoeba castellanii str. Neff	14926010
ACA1_301750	mRNA	ACA1_301750	NW_004457707.1	35533	36399	R	ACA1_301750	complement(join(<35533..35816,35949..>36399))	Acanthamoeba castellanii str. Neff	14926011
ACA1_301860	mRNA	ACA1_301860	NW_004457707.1	41171	45297	D	ACA1_301860	join(<41171..41550,41711..41819,41903..42033,42114..42492,42571..42766,42855..43000,43089..43938,44031..44083,44179..44246,44345..44465,44556..44731,44818..45004,45097..>45297)	Acanthamoeba castellanii str. Neff	14926012
ACA1_301870	mRNA	ACA1_301870	NW_004457707.1	45646	49581	D	ACA1_301870	join(<45646..47309,47350..47549,47663..47818,47927..48109,48183..48351,48467..48701,48768..48954,49034..49352,49467..>49581)	Acanthamoeba castellanii str. Neff	14926013
ACA1_301980	mRNA	ACA1_301980	NW_004457707.1	54096	55722	D	ACA1_301980	join(<54096..54133,54221..54320,54385..54458,54913..55165,55238..55323,55428..55530,55612..>55722)	Acanthamoeba castellanii str. Neff	14926014
ACA1_302190	mRNA	ACA1_302190	NW_004457707.1	56075	56711	D	ACA1_302190	join(<56075..56234,56392..56522,56598..>56711)	Acanthamoeba castellanii str. Neff	14926015
ACA1_321320	mRNA	ACA1_321320	NW_004457705.1	69	836	R	ACA1_321320	complement(join(<69..106,199..598,801..>836))	Acanthamoeba castellanii str. Neff	14925999
ACA1_321330	mRNA	ACA1_321330	NW_004457705.1	1012	2645	D	ACA1_321330	join(<1012..1165,1303..2456,2535..>2645)	Acanthamoeba castellanii str. Neff	14925987
ACA1_321340	mRNA	ACA1_321340	NW_004457705.1	3035	5281	D	ACA1_321340	join(<3035..3283,3391..3681,3769..3857,3945..4409,4508..4600,4713..4741,5026..5075,5225..>5281)	Acanthamoeba castellanii str. Neff	14925988
ACA1_321350	mRNA	ACA1_321350	NW_004457705.1	5731	10781	R	ACA1_321350	complement(join(<5731..5768,5867..6012,6098..6176,6299..6350,6450..6511,6632..6818,6907..7143,7257..7342,7424..7560,7742..7881,8001..8137,8284..8431,8541..8678,8774..8920,9048..9200,9278..9319,9405..9582,9715..9857,10217..10350,10491..10573,10765..>10781))	Acanthamoeba castellanii str. Neff	14925989
ACA1_321370	mRNA	ACA1_321370	NW_004457705.1	13278	14093	R	ACA1_321370	complement(join(<13278..13361,13470..>14093))	Acanthamoeba castellanii str. Neff	14925991
ACA1_321380	mRNA	ACA1_321380	NW_004457705.1	14592	21951	D	ACA1_321380	join(<14592..15275,15389..15734,15877..15988,16104..16194,16282..16435,16510..16678,16797..16908,16999..17097,17165..17227,17368..17484,17615..17740,17860..17952,18089..18224,18351..18563,18645..18703,18817..18943,19075..19156,19261..19428,19549..19630,19777..19876,20003..20085,20248..20397,20494..20586,20684..20864,21115..21247,21339..>21951)	Acanthamoeba castellanii str. Neff	14925992
ACA1_321390	mRNA	ACA1_321390	NW_004457705.1	22197	23228	D	ACA1_321390	join(<22197..22583,22611..>23228)	Acanthamoeba castellanii str. Neff	14925993
ACA1_321400	mRNA	ACA1_321400	NW_004457705.1	23613	25389	D	ACA1_321400	join(<23613..23694,23763..23855,23931..24045,24110..24221,24292..24374,24458..24620,24700..24856,24923..>25389)	Acanthamoeba castellanii str. Neff	14925994
ACA1_321410	mRNA	ACA1_321410	NW_004457705.1	25774	27045	D	ACA1_321410	join(<25774..25875,25961..26212,26492..26554,26631..26732,26803..>27045)	Acanthamoeba castellanii str. Neff	14925995
ACA1_321430	mRNA	ACA1_321430	NW_004457705.1	29133	29858	R	ACA1_321430	complement(join(<29133..29290,29369..29455,29514..29600,29681..>29858))	Acanthamoeba castellanii str. Neff	14925997
ACA1_321440	mRNA	ACA1_321440	NW_004457705.1	30136	31560	D	ACA1_321440	join(<30136..30359,30623..30739,30834..30964,31107..31178,31267..31391,31468..>31560)	Acanthamoeba castellanii str. Neff	14925998
ACA1_309790	mRNA	ACA1_309790	NW_004457704.1	6110	7274	R	ACA1_309790	complement(join(<6110..6319,6388..6750,6826..7156,7192..>7274))	Acanthamoeba castellanii str. Neff	14925986
ACA1_309800	mRNA	ACA1_309800	NW_004457704.1	7964	10224	D	ACA1_309800	join(<7964..8079,8187..8343,8442..8513,8591..8676,8769..8842,8907..9000,9136..9325,9435..9488,9554..9656,9688..9787,9859..9977,10007..10036,10121..>10224)	Acanthamoeba castellanii str. Neff	14925985
ACA1_309810	mRNA	ACA1_309810	NW_004457704.1	10427	12393	R	ACA1_309810	complement(join(<10427..10714,10816..10941,11021..11040,11116..11246,11312..11489,11584..11693,11797..11896,11975..12077,12182..12236,12362..>12393))	Acanthamoeba castellanii str. Neff	14925980
ACA1_309820	mRNA	ACA1_309820	NW_004457704.1	13669	16025	D	ACA1_309820	join(<13669..14343,14491..14607,14706..14813,14905..15000,15075..15236,15347..15427,15514..15643,15733..>16025)	Acanthamoeba castellanii str. Neff	14925981
ACA1_309830	mRNA	ACA1_309830	NW_004457704.1	16305	16589	R	ACA1_309830	complement(join(<16305..16424,16518..>16589))	Acanthamoeba castellanii str. Neff	14925982
ACA1_309840	mRNA	ACA1_309840	NW_004457704.1	16784	18699	D	ACA1_309840	join(<16784..16985,17056..17130,17268..17702,17722..17849,17906..18017,18109..18264,18348..18427,18496..>18699)	Acanthamoeba castellanii str. Neff	14925983
ACA1_309850	mRNA	ACA1_309850	NW_004457704.1	18937	20854	D	ACA1_309850	join(<18937..19489,19637..19762,19866..19952,20086..20153,20193..20250,20326..20460,20592..>20854)	Acanthamoeba castellanii str. Neff	14925984
ACA1_170770	mRNA	ACA1_170770	NW_004457702.1	75	1173	R	ACA1_170770	complement(join(<75..374,407..556,671..750,918..>1173))	Acanthamoeba castellanii str. Neff	14925979
ACA1_170780	mRNA	ACA1_170780	NW_004457702.1	2678	2803	D	ACA1_170780	<2678..>2803	Acanthamoeba castellanii str. Neff	14925567
ACA1_170790	mRNA	ACA1_170790	NW_004457702.1	2954	3501	R	ACA1_170790	complement(join(<2954..2973,3252..>3501))	Acanthamoeba castellanii str. Neff	14925555
ACA1_170800	mRNA	ACA1_170800	NW_004457702.1	4081	6284	R	ACA1_170800	complement(join(<4081..4099,4273..4408,4481..>6284))	Acanthamoeba castellanii str. Neff	14925556
ACA1_170810	mRNA	ACA1_170810	NW_004457702.1	10533	13448	D	ACA1_170810	join(<10533..10597,10697..10789,10951..11054,11208..11317,11460..11563,11734..11828,12117..12249,12572..12676,12758..12839,13056..13234,13349..>13448)	Acanthamoeba castellanii str. Neff	14925557
ACA1_170820	mRNA	ACA1_170820	NW_004457702.1	13713	14524	R	ACA1_170820	complement(join(<13713..13828,13935..14038,14385..>14524))	Acanthamoeba castellanii str. Neff	14925558
ACA1_170940	mRNA	ACA1_170940	NW_004457702.1	18965	20239	D	ACA1_170940	join(<18965..19010,19080..19208,19276..19387,19508..19596,19671..19754,19851..20018,20112..>20239)	Acanthamoeba castellanii str. Neff	14925560
ACA1_170950	mRNA	ACA1_170950	NW_004457702.1	20409	20854	D	ACA1_170950	join(<20409..20577,20790..>20854)	Acanthamoeba castellanii str. Neff	14925561
ACA1_170960	mRNA	ACA1_170960	NW_004457702.1	20961	25984	D	ACA1_170960	join(<20961..21025,21137..21267,21411..21579,21780..21940,22143..22207,22401..22542,22655..22768,22893..23197,23345..23403,23514..23610,23956..24032,24313..25616,25728..>25984)	Acanthamoeba castellanii str. Neff	14925562
ACA1_170970	mRNA	ACA1_170970	NW_004457702.1	26233	32567	R	ACA1_170970	complement(join(<26233..26273,26342..26552,26687..26756,26883..26964,27124..27247,27369..27491,27707..27768,27916..28015,28153..28204,28665..28741,28952..29003,29199..29520,29661..29930,30048..30253,30414..30509,30661..30730,30856..30952,31030..31116,31251..31441,31547..31690,31789..31876,32000..32101,32285..32409,32504..>32567))	Acanthamoeba castellanii str. Neff	14925563
ACA1_171090	mRNA	ACA1_171090	NW_004457702.1	38676	39475	R	ACA1_171090	complement(join(<38676..38756,38843..38908,39037..39322,39462..>39475))	Acanthamoeba castellanii str. Neff	14925565
ACA1_171100	mRNA	ACA1_171100	NW_004457702.1	40216	42196	D	ACA1_171100	join(<40216..40760,40908..41089,41175..>42196)	Acanthamoeba castellanii str. Neff	14925566
ACA1_171110	mRNA	ACA1_171110	NW_004457702.1	42535	44150	R	ACA1_171110	complement(join(<42535..42762,42892..43057,43135..43235,43318..43441,43570..43661,43783..43872,44025..>44150))	Acanthamoeba castellanii str. Neff	14925568
ACA1_171220	mRNA	ACA1_171220	NW_004457702.1	45122	46658	D	ACA1_171220	join(<45122..45163,45329..45727,45762..45854,45911..46198,46260..>46658)	Acanthamoeba castellanii str. Neff	14925569
ACA1_171230	mRNA	ACA1_171230	NW_004457702.1	48375	51192	D	ACA1_171230	join(<48375..48470,48575..48636,48810..48897,48985..49095,49336..49438,49861..49986,50081..50155,50386..50562,50639..50716,50844..50877,50964..>51192)	Acanthamoeba castellanii str. Neff	14925570
ACA1_171240	mRNA	ACA1_171240	NW_004457702.1	51322	52975	R	ACA1_171240	complement(join(<51322..51471,51566..51673,51721..51894,51994..52465,52560..52610,52690..52806,52902..>52975))	Acanthamoeba castellanii str. Neff	14925571
ACA1_171250	mRNA	ACA1_171250	NW_004457702.1	53107	59511	D	ACA1_171250	join(<53107..53160,53306..53321,53471..53585,53666..53816,53891..54078,54165..54284,54369..54470,54566..54692,54833..54985,55082..55250,55356..55471,55589..55688,55757..55848,55931..56016,56096..56158,56251..56331,56406..56499,56594..56736,56820..56908,56983..57188,57267..57356,57518..57809,57890..58012,58086..58304,58374..58498,58581..58687,58768..58867,58941..58991,59084..59196,59290..59394,59457..>59511)	Acanthamoeba castellanii str. Neff	14925572
ACA1_171260	mRNA	ACA1_171260	NW_004457702.1	59652	60814	R	ACA1_171260	complement(join(<59652..60427,60517..>60814))	Acanthamoeba castellanii str. Neff	14925573
ACA1_171270	mRNA	ACA1_171270	NW_004457702.1	61050	61923	D	ACA1_171270	join(<61050..61587,61652..>61923)	Acanthamoeba castellanii str. Neff	14925574
ACA1_171280	mRNA	ACA1_171280	NW_004457702.1	62109	65736	D	ACA1_171280	join(<62109..62273,62362..62457,62557..62616,63007..63075,63178..63324,63554..63603,63616..63688,63780..63855,63927..64032,64121..64217,64292..64371,64503..64641,64722..64817,64904..65091,65169..65302,65600..>65736)	Acanthamoeba castellanii str. Neff	14925575
ACA1_171290	mRNA	ACA1_171290	NW_004457702.1	66925	68691	D	ACA1_171290	<66925..>68691	Acanthamoeba castellanii str. Neff	14925576
ACA1_171300	mRNA	ACA1_171300	NW_004457702.1	69032	70503	R	ACA1_171300	complement(join(<69032..69220,69387..69498,69584..69713,69907..69997,70063..>70503))	Acanthamoeba castellanii str. Neff	14925577
ACA1_171310	mRNA	ACA1_171310	NW_004457702.1	70792	73159	D	ACA1_171310	join(<70792..71007,71101..71155,71224..71333,71393..71546,71618..71778,71862..72006,72075..72136,72210..72321,72416..72567,72678..72793,72902..72977,73001..>73159)	Acanthamoeba castellanii str. Neff	14925578
ACA1_171320	mRNA	ACA1_171320	NW_004457702.1	73564	76318	D	ACA1_171320	join(<73564..73644,73742..73832,73922..74037,74159..74405,74502..74658,74738..75016,75164..75431,75519..75862,75946..76154,76245..>76318)	Acanthamoeba castellanii str. Neff	14925579
ACA1_171330	mRNA	ACA1_171330	NW_004457702.1	76881	79185	D	ACA1_171330	join(<76881..77004,77120..77320,77401..77666,77737..77785,77856..77949,78015..78067,78132..78398,78551..78575,78662..78830,78936..78966,79043..>79185)	Acanthamoeba castellanii str. Neff	14925580
ACA1_171340	mRNA	ACA1_171340	NW_004457702.1	79933	83832	D	ACA1_171340	join(<79933..80042,80210..80273,80393..80425,80449..80659,80738..80873,80964..81064,81155..81230,81312..81395,81461..81510,81579..81659,81727..81853,81934..82016,82092..82151,82240..82314,82584..82714,82789..83058,83154..83355,83441..83593,83690..>83832)	Acanthamoeba castellanii str. Neff	14925581
ACA1_171360	mRNA	ACA1_171360	NW_004457702.1	87681	88067	D	ACA1_171360	<87681..>88067	Acanthamoeba castellanii str. Neff	14925583
ACA1_171370	mRNA	ACA1_171370	NW_004457702.1	88400	88973	D	ACA1_171370	join(<88400..88475,88510..88541,88617..>88973)	Acanthamoeba castellanii str. Neff	14925584
ACA1_171380	mRNA	ACA1_171380	NW_004457702.1	89332	90539	D	ACA1_171380	join(<89332..89496,89573..89734,89785..89891,90019..90103,90176..90243,90341..90431,90516..>90539)	Acanthamoeba castellanii str. Neff	14925585
ACA1_171390	mRNA	ACA1_171390	NW_004457702.1	90814	94597	R	ACA1_171390	complement(join(<90814..90912,90992..91129,91343..91464,91541..91742,91866..92052,92142..92243,92324..92433,92493..92605,92693..92763,92876..93449,93554..93672,93802..93914,94271..>94597))	Acanthamoeba castellanii str. Neff	14925586
ACA1_171400	mRNA	ACA1_171400	NW_004457702.1	94747	98156	R	ACA1_171400	complement(join(<94747..94782,95181..95276,95313..95365,95453..95534,95621..95700,95783..95946,96018..96424,96450..96637,96728..97474,97538..97776,97861..>98156))	Acanthamoeba castellanii str. Neff	14925587
ACA1_171410	mRNA	ACA1_171410	NW_004457702.1	99154	100794	D	ACA1_171410	join(<99154..99275,99357..99410,99491..99584,99646..99757,99839..99993,100086..100207,100282..100360,100458..100580,100663..>100794)	Acanthamoeba castellanii str. Neff	14925588
ACA1_171420	mRNA	ACA1_171420	NW_004457702.1	100918	101401	D	ACA1_171420	join(<100918..100956,101016..101108,101183..>101401)	Acanthamoeba castellanii str. Neff	14925589
ACA1_171430	mRNA	ACA1_171430	NW_004457702.1	102046	104926	D	ACA1_171430	join(<102046..102141,102319..102473,102604..102729,102866..102987,103091..103211,103297..103696,103773..103812,103927..104120,104222..>104926)	Acanthamoeba castellanii str. Neff	14925590
ACA1_171440	mRNA	ACA1_171440	NW_004457702.1	105000	109492	R	ACA1_171440	complement(join(<105000..105891,105971..106075,106171..106287,106397..106510,106679..107177,107245..107653,107737..107802,107874..107987,108079..108346,108415..108771,108864..109005,109093..>109492))	Acanthamoeba castellanii str. Neff	14925591
ACA1_171450	mRNA	ACA1_171450	NW_004457702.1	109647	110816	D	ACA1_171450	join(<109647..109700,109816..109893,109955..110057,110139..110262,110352..110400,110476..110561,110660..>110816)	Acanthamoeba castellanii str. Neff	14925592
ACA1_171460	mRNA	ACA1_171460	NW_004457702.1	111000	111364	R	ACA1_171460	complement(join(<111000..111172,111244..>111364))	Acanthamoeba castellanii str. Neff	14925593
ACA1_171470	mRNA	ACA1_171470	NW_004457702.1	111609	113342	D	ACA1_171470	join(<111609..111648,111715..111778,111914..111983,112033..112174,112266..112327,112611..112692,112788..112874,112961..113066,113150..>113342)	Acanthamoeba castellanii str. Neff	14925594
ACA1_171480	mRNA	ACA1_171480	NW_004457702.1	113486	115814	D	ACA1_171480	join(<113486..114082,114155..114251,114362..115502,115517..>115814)	Acanthamoeba castellanii str. Neff	14925595
ACA1_171490	mRNA	ACA1_171490	NW_004457702.1	116030	120847	D	ACA1_171490	join(<116030..116560,116671..116762,116840..116891,117004..117086,117221..117443,117537..117629,117756..117813,117921..117996,118078..118175,118291..118332,118404..118590,118669..119372,119529..119642,119734..119823,119932..120061,120213..120425,120532..>120847)	Acanthamoeba castellanii str. Neff	14925596
ACA1_171500	mRNA	ACA1_171500	NW_004457702.1	120947	122467	R	ACA1_171500	complement(join(<120947..121030,121150..121221,121393..121490,121559..121631,121699..121768,121843..121945,122017..122086,122180..122234,122331..>122467))	Acanthamoeba castellanii str. Neff	14925597
ACA1_171510	mRNA	ACA1_171510	NW_004457702.1	122948	124541	D	ACA1_171510	join(<122948..123128,123247..123468,123609..123762,123878..123975,124085..124153,124230..124291,124401..>124541)	Acanthamoeba castellanii str. Neff	14925598
ACA1_171520	mRNA	ACA1_171520	NW_004457702.1	124651	127844	R	ACA1_171520	complement(join(<124651..124760,124844..124907,125019..125124,125213..125321,125493..125608,125754..125834,125910..126034,126136..126303,126529..126691,126814..126903,126981..127156,127292..127420,127521..127619,127698..>127844))	Acanthamoeba castellanii str. Neff	14925599
ACA1_171630	mRNA	ACA1_171630	NW_004457702.1	127914	131714	R	ACA1_171630	complement(join(<127914..128052,128154..128233,128353..128484,128577..128982,129086..129176,129258..129347,129446..129532,129606..129708,129786..129849,129930..130009,130080..130173,130266..130403,130491..130612,130682..131008,131089..131232,131302..131447,131549..>131714))	Acanthamoeba castellanii str. Neff	14925600
ACA1_171640	mRNA	ACA1_171640	NW_004457702.1	132098	133010	R	ACA1_171640	complement(join(<132098..132127,132296..132367,132653..132868,132942..>133010))	Acanthamoeba castellanii str. Neff	14925601
ACA1_171650	mRNA	ACA1_171650	NW_004457702.1	133635	135246	D	ACA1_171650	join(<133635..133857,134066..134190,134285..134355,134427..134535,134840..134924,134990..135060,135139..>135246)	Acanthamoeba castellanii str. Neff	14925602
ACA1_171660	mRNA	ACA1_171660	NW_004457702.1	135668	138107	D	ACA1_171660	join(<135668..135856,136082..136156,136247..136328,136438..136520,136652..136808,136890..136996,137087..137144,137222..137372,137640..137750,137849..>138107)	Acanthamoeba castellanii str. Neff	14925603
ACA1_171670	mRNA	ACA1_171670	NW_004457702.1	138750	140889	D	ACA1_171670	join(<138750..138787,138845..139117,139202..139532,139628..139744,139819..139944,140038..140093,140165..140266,140354..140484,140556..140680,140761..>140889)	Acanthamoeba castellanii str. Neff	14925604
ACA1_171680	mRNA	ACA1_171680	NW_004457702.1	141142	144122	R	ACA1_171680	complement(join(<141142..141195,141320..141472,141581..141643,141753..142036,142148..142253,142385..142486,142587..142714,142823..142961,143041..143142,143288..143440,143569..143652,143976..>144122))	Acanthamoeba castellanii str. Neff	14925605
ACA1_171690	mRNA	ACA1_171690	NW_004457702.1	144279	145107	D	ACA1_171690	join(<144279..144351,144450..144552,144638..144691,144806..144858,144989..>145107)	Acanthamoeba castellanii str. Neff	14925606
ACA1_171700	mRNA	ACA1_171700	NW_004457702.1	145445	145735	D	ACA1_171700	join(<145445..145503,145564..>145735)	Acanthamoeba castellanii str. Neff	14925607
ACA1_171710	mRNA	ACA1_171710	NW_004457702.1	145786	149532	D	ACA1_171710	join(<145786..146096,146190..146276,146347..146500,146570..146730,146801..146882,146958..147017,147085..147196,147266..147381,147455..147544,147646..147918,147997..148068,148145..148255,148358..148474,148553..148609,148724..148819,148888..149007,149094..149171,149273..149365,149461..>149532)	Acanthamoeba castellanii str. Neff	14925608
ACA1_171720	mRNA	ACA1_171720	NW_004457702.1	149814	150871	R	ACA1_171720	complement(join(<149814..150162,150270..150402,150482..150599,150675..150745,150823..>150871))	Acanthamoeba castellanii str. Neff	14925609
ACA1_171730	mRNA	ACA1_171730	NW_004457702.1	152069	153237	D	ACA1_171730	join(<152069..152220,152390..152544,152635..152769,152871..153120,153225..>153237)	Acanthamoeba castellanii str. Neff	14925610
ACA1_171740	mRNA	ACA1_171740	NW_004457702.1	153609	155387	R	ACA1_171740	complement(join(<153609..153721,153795..154001,154059..154274,154335..154422,154486..154622,154678..154799,154861..155008,155075..>155387))	Acanthamoeba castellanii str. Neff	14925611
ACA1_171750	mRNA	ACA1_171750	NW_004457702.1	155510	156800	D	ACA1_171750	join(<155510..155544,155625..156080,156149..156224,156306..>156800)	Acanthamoeba castellanii str. Neff	14925612
ACA1_171760	mRNA	ACA1_171760	NW_004457702.1	156874	158891	D	ACA1_171760	join(<156874..156948,157062..157167,157244..157296,157402..157534,157556..157563,157605..157737,157801..157832,157914..157977,158045..158100,158209..158457,158501..158569,158784..>158891)	Acanthamoeba castellanii str. Neff	14925613
ACA1_171770	mRNA	ACA1_171770	NW_004457702.1	158960	160659	R	ACA1_171770	complement(join(<158960..159069,159206..159349,159419..159562,159663..159763,159847..159910,159988..160078,160166..160222,160315..>160659))	Acanthamoeba castellanii str. Neff	14925614
ACA1_171780	mRNA	ACA1_171780	NW_004457702.1	160763	162684	R	ACA1_171780	complement(join(<160763..160768,160884..161023,161109..161155,161237..161346,161512..161629,161720..161866,161940..162024,162117..162202,162281..162342,162412..162532,162602..>162684))	Acanthamoeba castellanii str. Neff	14925615
ACA1_171790	mRNA	ACA1_171790	NW_004457702.1	162910	163661	D	ACA1_171790	join(<162910..163209,163281..>163661)	Acanthamoeba castellanii str. Neff	14925616
ACA1_171800	mRNA	ACA1_171800	NW_004457702.1	164266	165970	D	ACA1_171800	join(<164266..164355,164432..164639,164704..165304,165385..>165970)	Acanthamoeba castellanii str. Neff	14925617
ACA1_171810	mRNA	ACA1_171810	NW_004457702.1	166241	167077	D	ACA1_171810	join(<166241..166393,166467..166565,166637..166761,166846..166956,167008..>167077)	Acanthamoeba castellanii str. Neff	14925618
ACA1_171820	mRNA	ACA1_171820	NW_004457702.1	167387	169832	D	ACA1_171820	join(<167387..167936,168060..168149,168242..168303,168390..168464,168554..168661,168739..168876,168958..169008,169172..169330,169369..169494,169598..169687,169764..>169832)	Acanthamoeba castellanii str. Neff	14925619
ACA1_171830	mRNA	ACA1_171830	NW_004457702.1	170579	173433	D	ACA1_171830	join(<170579..170668,170771..170850,170947..171246,171319..171440,171512..171672,171750..171896,171986..172085,172172..172315,172413..172508,172573..172708,172783..172843,172908..173013,173083..173222,173302..>173433)	Acanthamoeba castellanii str. Neff	14925620
ACA1_171840	mRNA	ACA1_171840	NW_004457702.1	173649	177017	D	ACA1_171840	join(<173649..173727,173802..173929,174023..174042,174174..174224,174300..174356,174428..174565,174690..174951,175044..175167,175238..175295,175370..175499,175597..175764,175831..175909,175979..176097,176189..176355,176435..176554,176633..176765,176871..>177017)	Acanthamoeba castellanii str. Neff	14925621
ACA1_171850	mRNA	ACA1_171850	NW_004457702.1	177129	178164	D	ACA1_171850	join(<177129..177529,177610..177737,177833..>178164)	Acanthamoeba castellanii str. Neff	14925622
ACA1_171860	mRNA	ACA1_171860	NW_004457702.1	178537	181729	D	ACA1_171860	join(<178537..178560,178687..178805,178928..179013,179351..179482,179601..179773,179862..179945,180017..180064,180162..180289,180421..180478,180570..180650,180803..180856,180955..181074,181211..>181729)	Acanthamoeba castellanii str. Neff	14925623
ACA1_171870	mRNA	ACA1_171870	NW_004457702.1	181844	183444	R	ACA1_171870	complement(join(<181844..182200,182270..182475,182556..182777,183057..>183444))	Acanthamoeba castellanii str. Neff	14925624
ACA1_171880	mRNA	ACA1_171880	NW_004457702.1	183767	186205	R	ACA1_171880	complement(join(<183767..183873,183963..184041,184123..184242,184382..185918,186081..>186205))	Acanthamoeba castellanii str. Neff	14925625
ACA1_171890	mRNA	ACA1_171890	NW_004457702.1	186486	193277	D	ACA1_171890	join(<186486..186608,186729..186795,186839..186996,187087..187272,187359..187517,187594..187683,187760..188106,188174..188300,188371..188484,188579..188785,188905..188972,189254..189432,189525..189841,189926..190021,190107..190231,190308..190551,190641..190769,190859..190949,191017..191233,191325..191539,191687..191861,191937..192131,192240..192336,192419..192638,192739..192911,193197..>193277)	Acanthamoeba castellanii str. Neff	14925626
ACA1_171900	mRNA	ACA1_171900	NW_004457702.1	194008	196857	D	ACA1_171900	join(<194008..194242,194329..194484,194596..194697,194780..194923,195015..195084,195282..195450,195544..195933,196021..196254,196357..>196857)	Acanthamoeba castellanii str. Neff	14925627
ACA1_171910	mRNA	ACA1_171910	NW_004457702.1	197026	199243	R	ACA1_171910	complement(join(<197026..197207,197308..197432,197543..197613,197734..197927,198032..198107,198232..198317,198389..198491,198610..198720,198795..198906,199035..>199243))	Acanthamoeba castellanii str. Neff	14925628
ACA1_171920	mRNA	ACA1_171920	NW_004457702.1	199795	202458	D	ACA1_171920	join(<199795..200085,200222..200334,200402..200522,200656..200730,200844..200943,201095..201166,201252..201493,201562..201899,201999..202222,202298..>202458)	Acanthamoeba castellanii str. Neff	14925629
ACA1_171930	mRNA	ACA1_171930	NW_004457702.1	202584	204531	R	ACA1_171930	complement(join(<202584..202886,202980..203290,203387..203512,203580..203687,203824..203973,204089..204182,204280..204359,204447..>204531))	Acanthamoeba castellanii str. Neff	14925630
ACA1_171940	mRNA	ACA1_171940	NW_004457702.1	204599	206164	R	ACA1_171940	complement(join(<204599..204878,204962..205125,205170..205428,205506..205726,205792..205872,206111..>206164))	Acanthamoeba castellanii str. Neff	14925631
ACA1_171950	mRNA	ACA1_171950	NW_004457702.1	207379	208016	D	ACA1_171950	join(<207379..207495,207559..207632,207686..207816,207892..>208016)	Acanthamoeba castellanii str. Neff	14925632
ACA1_171960	mRNA	ACA1_171960	NW_004457702.1	208088	211254	R	ACA1_171960	complement(join(<208088..208318,208385..208480,208556..208651,208746..209021,209111..209246,209327..209672,209739..209826,209903..210000,210056..210162,210282..210419,210621..210738,210847..211011,211116..>211254))	Acanthamoeba castellanii str. Neff	14925633
ACA1_171970	mRNA	ACA1_171970	NW_004457702.1	211439	212549	D	ACA1_171970	join(<211439..211462,211524..211697,211755..>212549)	Acanthamoeba castellanii str. Neff	14925634
ACA1_171980	mRNA	ACA1_171980	NW_004457702.1	212605	214053	R	ACA1_171980	complement(join(<212605..212769,212809..213092,213167..213253,213316..213427,213523..213658,213741..213805,213925..>214053))	Acanthamoeba castellanii str. Neff	14925635
ACA1_172000	mRNA	ACA1_172000	NW_004457702.1	221795	226120	R	ACA1_172000	complement(join(<221795..222104,222193..222331,222426..222826,222953..223364,223490..223553,223666..223800,223928..224017,224109..224243,224374..224467,224617..225293,225522..225679,225834..225976,226077..>226120))	Acanthamoeba castellanii str. Neff	14925637
ACA1_172010	mRNA	ACA1_172010	NW_004457702.1	226516	228357	D	ACA1_172010	join(<226516..226742,226907..227252,227331..227693,227800..227884,227994..228101,228221..>228357)	Acanthamoeba castellanii str. Neff	14925638
ACA1_172020	mRNA	ACA1_172020	NW_004457702.1	228663	229116	D	ACA1_172020	join(<228663..228894,228983..>229116)	Acanthamoeba castellanii str. Neff	14925639
ACA1_172030	mRNA	ACA1_172030	NW_004457702.1	229721	230140	D	ACA1_172030	<229721..>230140	Acanthamoeba castellanii str. Neff	14925640
ACA1_172040	mRNA	ACA1_172040	NW_004457702.1	230693	231087	D	ACA1_172040	join(<230693..230855,230942..>231087)	Acanthamoeba castellanii str. Neff	14925641
ACA1_172050	mRNA	ACA1_172050	NW_004457702.1	231192	232369	R	ACA1_172050	complement(join(<231192..231348,231424..231562,231655..231827,232076..232236,232298..>232369))	Acanthamoeba castellanii str. Neff	14925642
ACA1_172060	mRNA	ACA1_172060	NW_004457702.1	232466	234338	R	ACA1_172060	complement(join(<232466..232669,232746..232883,232988..233106,233172..233271,233363..233473,233537..233931,234073..234221,234319..>234338))	Acanthamoeba castellanii str. Neff	14925643
ACA1_172070	mRNA	ACA1_172070	NW_004457702.1	234492	241622	D	ACA1_172070	join(<234492..234632,234757..234864,234950..235049,235165..235229,235326..235423,235549..235757,235804..235920,236002..236056,236148..236239,236325..236448,236511..236637,236760..236858,236958..236996,237079..237189,237253..237339,237507..237571,237670..237832,237912..238004,238150..238278,238377..238478,238612..239280,239381..239733,239748..239829,239911..240037,240218..240880,240994..241097,241200..241351,241481..>241622)	Acanthamoeba castellanii str. Neff	14925644
ACA1_172080	mRNA	ACA1_172080	NW_004457702.1	241686	242991	R	ACA1_172080	complement(join(<241686..241898,242034..242125,242232..242280,242364..242495,242581..242696,242820..>242991))	Acanthamoeba castellanii str. Neff	14925645
ACA1_172090	mRNA	ACA1_172090	NW_004457702.1	243182	244905	R	ACA1_172090	complement(join(<243182..243290,243387..243464,243575..243649,243779..243982,244060..244204,244307..244412,244528..244590,244657..244759,244865..>244905))	Acanthamoeba castellanii str. Neff	14925646
ACA1_172100	mRNA	ACA1_172100	NW_004457702.1	245721	248890	D	ACA1_172100	join(<245721..246146,246263..246424,246514..246667,246839..246891,246980..247071,247147..247283,247379..247451,247534..247629,247718..248078,248192..>248890)	Acanthamoeba castellanii str. Neff	14925647
ACA1_172110	mRNA	ACA1_172110	NW_004457702.1	249274	250203	D	ACA1_172110	join(<249274..249718,249789..249981,250071..>250203)	Acanthamoeba castellanii str. Neff	14925648
ACA1_172120	mRNA	ACA1_172120	NW_004457702.1	250777	251409	D	ACA1_172120	join(<250777..250825,250932..251171,251243..>251409)	Acanthamoeba castellanii str. Neff	14925649
ACA1_172130	mRNA	ACA1_172130	NW_004457702.1	251587	254107	R	ACA1_172130	complement(join(<251587..251667,251770..251893,251988..252085,252204..252388,252536..252619,252711..252877,253043..253117,253188..253318,253457..253574,253696..253763,253871..253981,254069..>254107))	Acanthamoeba castellanii str. Neff	14925650
ACA1_172140	mRNA	ACA1_172140	NW_004457702.1	254333	255539	D	ACA1_172140	join(<254333..254386,254464..254573,254659..254719,254807..254872,254947..255033,255151..255229,255352..>255539)	Acanthamoeba castellanii str. Neff	14925651
ACA1_172150	mRNA	ACA1_172150	NW_004457702.1	255860	257559	D	ACA1_172150	join(<255860..256059,256134..256249,256332..256431,256557..257238,257311..>257559)	Acanthamoeba castellanii str. Neff	14925652
ACA1_172160	mRNA	ACA1_172160	NW_004457702.1	257653	259498	R	ACA1_172160	complement(join(<257653..257841,257958..258091,258347..258431,258519..258887,259012..259116,259230..259321,259393..>259498))	Acanthamoeba castellanii str. Neff	14925653
ACA1_172170	mRNA	ACA1_172170	NW_004457702.1	259595	262195	R	ACA1_172170	complement(join(<259595..259682,259793..260046,260121..260301,260401..260537,260644..260755,260860..260978,261091..261329,261476..261587,261672..261758,261872..261949,262082..>262195))	Acanthamoeba castellanii str. Neff	14925654
ACA1_172180	mRNA	ACA1_172180	NW_004457702.1	262497	269282	R	ACA1_172180	complement(join(<262497..262569,262710..262757,262861..262929,263010..263163,263231..263318,263427..263665,263795..264071,264156..264255,264364..264496,264592..264839,264932..267033,267113..267660,267745..267813,267898..268015,268088..268130,268214..268386,268473..268590,268697..268751,268903..269005,269091..269146,269213..>269282))	Acanthamoeba castellanii str. Neff	14925655
ACA1_172190	mRNA	ACA1_172190	NW_004457702.1	269822	273948	D	ACA1_172190	join(<269822..270026,270151..270206,270298..270483,270598..270694,270773..270999,271084..271644,271732..271930,272018..272223,272295..272534,272653..272835,272908..273018,273119..273217,273304..>273948)	Acanthamoeba castellanii str. Neff	14925656
ACA1_172200	mRNA	ACA1_172200	NW_004457702.1	274727	274957	R	ACA1_172200	complement(<274727..>274957)	Acanthamoeba castellanii str. Neff	14925657
ACA1_172210	mRNA	ACA1_172210	NW_004457702.1	275786	278562	R	ACA1_172210	complement(join(<275786..276028,276183..276289,276389..276494,276603..276798,276897..276991,277089..277319,277434..277553,277693..277770,277882..277939,278017..278192,278260..278387,278487..>278562))	Acanthamoeba castellanii str. Neff	14925658
ACA1_172220	mRNA	ACA1_172220	NW_004457702.1	278732	279559	R	ACA1_172220	complement(join(<278732..278784,278872..278967,279043..279340,279425..>279559))	Acanthamoeba castellanii str. Neff	14925659
ACA1_172230	mRNA	ACA1_172230	NW_004457702.1	279684	281140	D	ACA1_172230	join(<279684..279902,279989..280114,280213..280444,280504..280614,280790..280890,280970..>281140)	Acanthamoeba castellanii str. Neff	14925660
ACA1_172240	mRNA	ACA1_172240	NW_004457702.1	281448	283138	D	ACA1_172240	join(<281448..281595,281691..282173,282399..>283138)	Acanthamoeba castellanii str. Neff	14925661
ACA1_172250	mRNA	ACA1_172250	NW_004457702.1	283204	287289	R	ACA1_172250	complement(join(<283204..283363,283458..283940,284075..284957,285045..285188,285276..285441,285545..285672,285803..285905,285973..286136,286220..286322,286432..286604,286671..287018,287145..>287289))	Acanthamoeba castellanii str. Neff	14925662
ACA1_172260	mRNA	ACA1_172260	NW_004457702.1	287438	288062	R	ACA1_172260	complement(join(<287438..287622,287750..>288062))	Acanthamoeba castellanii str. Neff	14925663
ACA1_172370	mRNA	ACA1_172370	NW_004457702.1	288479	288964	D	ACA1_172370	join(<288479..288565,288669..288701,288791..>288964)	Acanthamoeba castellanii str. Neff	14925664
ACA1_172490	mRNA	ACA1_172490	NW_004457702.1	293521	294152	R	ACA1_172490	complement(join(<293521..293717,293826..293898,294102..>294152))	Acanthamoeba castellanii str. Neff	14925666
ACA1_172600	mRNA	ACA1_172600	NW_004457702.1	294693	295322	D	ACA1_172600	<294693..>295322	Acanthamoeba castellanii str. Neff	14925667
ACA1_172710	mRNA	ACA1_172710	NW_004457702.1	295415	301088	R	ACA1_172710	complement(join(<295415..295469,295543..295642,295755..295815,295923..296043,296143..296609,296706..296807,296914..296966,297060..297129,297215..297290,297375..297550,297629..297726,297809..297929,298254..298315,298393..298538,298627..298733,298838..298941,299042..299174,299264..299317,299397..299484,299562..299695,299787..299903,299939..300149,300219..300327,300416..300477,300607..>301088))	Acanthamoeba castellanii str. Neff	14925668
ACA1_172720	mRNA	ACA1_172720	NW_004457702.1	301317	304594	D	ACA1_172720	join(<301317..301382,301730..301841,301908..301995,302080..302206,302305..302370,302462..302515,302578..302663,302738..302852,302935..303144,303262..303372,303457..303555,303645..303765,303840..303913,304003..304059,304153..304424,304513..>304594)	Acanthamoeba castellanii str. Neff	14925669
ACA1_172730	mRNA	ACA1_172730	NW_004457702.1	304737	306383	R	ACA1_172730	complement(<304737..>306383)	Acanthamoeba castellanii str. Neff	14925670
ACA1_172740	mRNA	ACA1_172740	NW_004457702.1	306700	308393	R	ACA1_172740	complement(join(<306700..306877,306957..307058,307141..307227,307294..307558,307654..307756,307767..307782,308056..308105,308178..>308393))	Acanthamoeba castellanii str. Neff	14925671
ACA1_172750	mRNA	ACA1_172750	NW_004457702.1	308965	311232	D	ACA1_172750	join(<308965..309343,309497..309737,309815..310604,310689..310832,310936..>311232)	Acanthamoeba castellanii str. Neff	14925672
ACA1_172760	mRNA	ACA1_172760	NW_004457702.1	311730	313700	R	ACA1_172760	complement(join(<311730..311821,311903..312439,312553..312618,312749..313034,313107..313162,313283..313405,313472..>313700))	Acanthamoeba castellanii str. Neff	14925673
ACA1_172770	mRNA	ACA1_172770	NW_004457702.1	314260	319393	D	ACA1_172770	join(<314260..314338,314443..314545,314646..314769,314853..315155,315264..315465,315531..315776,315860..315941,316012..316076,316143..316224,316314..316382,316475..316545,316630..316699,316977..317143,317273..317312,317384..317504,317654..317953,318053..318183,318221..318383,318474..318631,318844..>319393)	Acanthamoeba castellanii str. Neff	14925674
ACA1_172780	mRNA	ACA1_172780	NW_004457702.1	319590	322002	D	ACA1_172780	join(<319590..319697,319787..320170,320262..320419,320552..321012,321085..321188,321234..321460,321585..>322002)	Acanthamoeba castellanii str. Neff	14925675
ACA1_172790	mRNA	ACA1_172790	NW_004457702.1	322039	324551	R	ACA1_172790	complement(join(<322039..323022,323044..323453,323527..324064,324228..>324551))	Acanthamoeba castellanii str. Neff	14925676
ACA1_172800	mRNA	ACA1_172800	NW_004457702.1	325123	328438	R	ACA1_172800	complement(join(<325123..326668,326736..327809,328029..>328438))	Acanthamoeba castellanii str. Neff	14925677
ACA1_172810	mRNA	ACA1_172810	NW_004457702.1	329241	331157	R	ACA1_172810	complement(join(<329241..329251,329349..329538,329648..329808,329912..330018,330101..330228,330331..330396,330473..330570,330590..330948,331056..331086,331100..>331157))	Acanthamoeba castellanii str. Neff	14925678
ACA1_172830	mRNA	ACA1_172830	NW_004457702.1	332166	333806	R	ACA1_172830	complement(join(<332166..332238,332331..332411,332490..332736,332825..332983,333057..333149,333242..333324,333422..333495,333565..333621,333684..>333806))	Acanthamoeba castellanii str. Neff	14925680
ACA1_172840	mRNA	ACA1_172840	NW_004457702.1	334034	335038	D	ACA1_172840	join(<334034..334398,334480..>335038)	Acanthamoeba castellanii str. Neff	14925681
ACA1_172850	mRNA	ACA1_172850	NW_004457702.1	335098	340406	R	ACA1_172850	complement(join(<335098..335255,335362..335530,335618..335733,335827..335945,336063..336154,336224..336404,336529..336577,336658..336730,336814..336892,336980..337043,337129..337211,337297..337388,337509..337595,337702..337872,337963..338079,338281..338406,338544..338626,338709..338769,338833..338892,338958..339016,339095..339169,339206..339550,339621..339905,340028..340138,340376..>340406))	Acanthamoeba castellanii str. Neff	14925682
ACA1_172860	mRNA	ACA1_172860	NW_004457702.1	340875	342337	D	ACA1_172860	join(<340875..340979,341083..341306,341404..341477,341567..341661,341740..341860,341932..341986,342058..342134,342237..>342337)	Acanthamoeba castellanii str. Neff	14925683
ACA1_172870	mRNA	ACA1_172870	NW_004457702.1	342412	343690	R	ACA1_172870	complement(join(<342412..342589,342650..342807,342905..342999,343114..343257,343341..343494,343577..>343690))	Acanthamoeba castellanii str. Neff	14925684
ACA1_172880	mRNA	ACA1_172880	NW_004457702.1	344576	349930	D	ACA1_172880	join(<344576..344702,344820..344969,345065..345141,345218..345266,345419..345572,345709..345771,345878..345975,346061..346141,346214..347024,347099..347208,347311..347440,347645..347729,347851..347992,348067..348146,348218..348268,348425..348621,348745..>349930)	Acanthamoeba castellanii str. Neff	14925685
ACA1_172890	mRNA	ACA1_172890	NW_004457702.1	350281	350630	D	ACA1_172890	join(<350281..350372,350440..350488,350523..>350630)	Acanthamoeba castellanii str. Neff	14925686
ACA1_172900	mRNA	ACA1_172900	NW_004457702.1	350822	353375	R	ACA1_172900	complement(join(<350822..351055,351146..351604,351694..351851,351944..352040,352148..352250,352357..352495,352598..352745,352884..>353375))	Acanthamoeba castellanii str. Neff	14925687
ACA1_172910	mRNA	ACA1_172910	NW_004457702.1	353610	359009	R	ACA1_172910	complement(join(<353610..353873,353945..354169,354299..354342,354458..354580,354677..354772,354872..354932,355041..355120,355209..355287,355378..355515,355592..355674,355754..355871,355925..355992,356087..356213,356339..356401,356463..356526,356603..356670,356737..356834,356976..357063,357140..357286,357396..357487,357549..357644,357775..357856,357922..357987,358362..358478,358669..358743,358805..358846,358929..>359009))	Acanthamoeba castellanii str. Neff	14925688
ACA1_172920	mRNA	ACA1_172920	NW_004457702.1	359135	365286	D	ACA1_172920	join(<359135..359210,359384..359473,359565..359640,359723..359790,359860..359942,360444..360537,360624..360754,360878..360953,361042..361139,361245..361384,361467..361574,361652..361751,361842..361925,362021..362110,362216..362323,362414..362530,362660..363515,363644..363738,363817..363905,363980..364052,364143..364244,364318..364449,364543..>365286)	Acanthamoeba castellanii str. Neff	14925689
ACA1_172930	mRNA	ACA1_172930	NW_004457702.1	365399	365758	R	ACA1_172930	complement(join(<365399..365473,365564..>365758))	Acanthamoeba castellanii str. Neff	14925690
ACA1_172940	mRNA	ACA1_172940	NW_004457702.1	366721	370687	D	ACA1_172940	join(<366721..366868,367026..367072,367170..367251,367333..367452,367566..367779,367863..367963,368046..368210,368314..368620,368751..368975,369076..369190,369273..369381,369619..369734,369869..370128,370212..370317,370481..>370687)	Acanthamoeba castellanii str. Neff	14925691
ACA1_172950	mRNA	ACA1_172950	NW_004457702.1	370889	371266	R	ACA1_172950	complement(<370889..>371266)	Acanthamoeba castellanii str. Neff	14925692
ACA1_172960	mRNA	ACA1_172960	NW_004457702.1	371457	373106	D	ACA1_172960	join(<371457..371542,371628..371765,371873..372023,372240..372406,372471..372535,372604..372730,372814..372884,372976..>373106)	Acanthamoeba castellanii str. Neff	14925693
ACA1_172970	mRNA	ACA1_172970	NW_004457702.1	373192	377769	R	ACA1_172970	complement(join(<373192..373424,373650..373712,373794..373844,373904..373999,374076..374220,374321..374437,374512..374592,374725..374795,374890..374958,375052..375086,375164..375274,375368..375439,375555..375607,375703..375771,375828..375882,375984..376143,376217..376300,376385..376444,376538..376600,376714..376770,376900..377043,377149..377231,377362..377426,377533..377636,377715..>377769))	Acanthamoeba castellanii str. Neff	14925694
ACA1_172980	mRNA	ACA1_172980	NW_004457702.1	379153	380251	D	ACA1_172980	join(<379153..379437,379507..379700,379774..379923,379993..380091,380161..>380251)	Acanthamoeba castellanii str. Neff	14925695
ACA1_172990	mRNA	ACA1_172990	NW_004457702.1	380709	381107	D	ACA1_172990	<380709..>381107	Acanthamoeba castellanii str. Neff	14925696
ACA1_173000	mRNA	ACA1_173000	NW_004457702.1	382064	382903	R	ACA1_173000	complement(join(<382064..382420,382433..382511,382587..382636,382649..>382903))	Acanthamoeba castellanii str. Neff	14925697
ACA1_173010	mRNA	ACA1_173010	NW_004457702.1	384278	386300	R	ACA1_173010	complement(join(<384278..386169,386234..>386300))	Acanthamoeba castellanii str. Neff	14925698
ACA1_173020	mRNA	ACA1_173020	NW_004457702.1	386656	387441	R	ACA1_173020	complement(<386656..>387441)	Acanthamoeba castellanii str. Neff	14925699
ACA1_173030	mRNA	ACA1_173030	NW_004457702.1	388171	391155	D	ACA1_173030	<388171..>391155	Acanthamoeba castellanii str. Neff	14925700
ACA1_173040	mRNA	ACA1_173040	NW_004457702.1	391221	392139	R	ACA1_173040	complement(join(<391221..391550,391663..>392139))	Acanthamoeba castellanii str. Neff	14925701
ACA1_173050	mRNA	ACA1_173050	NW_004457702.1	392336	392810	R	ACA1_173050	complement(join(<392336..392502,392612..392624,392655..>392810))	Acanthamoeba castellanii str. Neff	14925702
ACA1_173060	mRNA	ACA1_173060	NW_004457702.1	393058	395110	R	ACA1_173060	complement(join(<393058..393395,393485..393584,393692..393863,393950..394025,394101..394159,394235..394300,394379..394438,394537..394602,394684..394921,395047..>395110))	Acanthamoeba castellanii str. Neff	14925703
ACA1_173070	mRNA	ACA1_173070	NW_004457702.1	395258	396863	D	ACA1_173070	join(<395258..395611,395668..395716,395798..395900,395940..396025,396119..396187,396269..396302,396333..396377,396454..396490,396595..396689,396755..>396863)	Acanthamoeba castellanii str. Neff	14925704
ACA1_173080	mRNA	ACA1_173080	NW_004457702.1	396982	397364	D	ACA1_173080	join(<396982..397155,397272..>397364)	Acanthamoeba castellanii str. Neff	14925705
ACA1_173090	mRNA	ACA1_173090	NW_004457702.1	397393	400571	D	ACA1_173090	join(<397393..397543,397672..397767,397861..397939,398073..399021,399093..399145,399246..399370,399482..399557,399638..399713,399793..399853,399947..399984,400057..400136,400222..400339,400461..>400571)	Acanthamoeba castellanii str. Neff	14925706
ACA1_173100	mRNA	ACA1_173100	NW_004457702.1	402392	404626	R	ACA1_173100	complement(<402392..>404626)	Acanthamoeba castellanii str. Neff	14925707
ACA1_173120	mRNA	ACA1_173120	NW_004457702.1	407481	408482	R	ACA1_173120	complement(join(<407481..408251,408429..>408482))	Acanthamoeba castellanii str. Neff	14925709
ACA1_173130	mRNA	ACA1_173130	NW_004457702.1	408650	409383	R	ACA1_173130	complement(join(<408650..408761,408848..408927,409050..409182,409274..>409383))	Acanthamoeba castellanii str. Neff	14925710
ACA1_173140	mRNA	ACA1_173140	NW_004457702.1	409559	411043	D	ACA1_173140	join(<409559..409604,409691..409790,409868..409986,410077..410239,410322..410426,410499..410554,410648..410776,410841..>411043)	Acanthamoeba castellanii str. Neff	14925711
ACA1_173150	mRNA	ACA1_173150	NW_004457702.1	411338	413447	D	ACA1_173150	join(<411338..411669,411706..411808,411904..411964,412046..412216,412294..>413447)	Acanthamoeba castellanii str. Neff	14925712
ACA1_173160	mRNA	ACA1_173160	NW_004457702.1	413680	415604	D	ACA1_173160	join(<413680..414278,414404..414663,414795..414877,414976..415035,415130..415329,415418..>415604)	Acanthamoeba castellanii str. Neff	14925713
ACA1_173170	mRNA	ACA1_173170	NW_004457702.1	416206	424140	R	ACA1_173170	complement(join(<416206..416679,416747..417044,417143..417327,417474..417524,417551..417781,417834..418037,418177..418269,418371..418588,418715..418861,418954..419089,419181..419339,419421..419506,419567..419684,419799..419940,420049..420117,420205..420272,420445..420540,420622..420750,420854..420927,421036..421189,421326..421408,421488..421563,421729..421871,421997..422063,422156..422257,422344..422407,422471..422562,422645..422733,422855..422995,423080..423149,423222..423340,423459..423643,423917..424005,424123..>424140))	Acanthamoeba castellanii str. Neff	14925714
ACA1_173180	mRNA	ACA1_173180	NW_004457702.1	424801	425958	R	ACA1_173180	complement(join(<424801..424914,424987..425093,425202..425312,425392..425533,425601..425729,425878..>425958))	Acanthamoeba castellanii str. Neff	14925715
ACA1_173190	mRNA	ACA1_173190	NW_004457702.1	426959	428639	D	ACA1_173190	join(<426959..428492,428590..>428639)	Acanthamoeba castellanii str. Neff	14925716
ACA1_173200	mRNA	ACA1_173200	NW_004457702.1	430342	433353	D	ACA1_173200	join(<430342..430863,431369..431954,432034..432173,432321..432767,432862..432958,433034..433169,433254..>433353)	Acanthamoeba castellanii str. Neff	14925717
ACA1_173210	mRNA	ACA1_173210	NW_004457702.1	433589	434124	R	ACA1_173210	complement(join(<433589..433710,433818..433920,434107..>434124))	Acanthamoeba castellanii str. Neff	14925718
ACA1_173220	mRNA	ACA1_173220	NW_004457702.1	434330	435034	D	ACA1_173220	<434330..>435034	Acanthamoeba castellanii str. Neff	14925719
ACA1_173230	mRNA	ACA1_173230	NW_004457702.1	435133	438371	R	ACA1_173230	complement(join(<435133..435358,435446..435834,435854..435960,436050..436407,436506..436629,436737..436960,437095..437204,437338..437485,437647..437758,437948..438055,438137..438235,438334..>438371))	Acanthamoeba castellanii str. Neff	14925720
ACA1_173240	mRNA	ACA1_173240	NW_004457702.1	438484	444063	R	ACA1_173240	complement(join(<438484..438552,438641..438713,438826..438968,439068..439132,439205..439301,439417..439569,439661..439833,439930..440097,440192..440302,440398..440482,440553..440677,440783..440888,440979..441124,441228..441387,441487..441590,441774..441972,442046..442157,442281..442360,442453..442524,442652..443220,443334..443416,443499..443675,443775..443868,443946..>444063))	Acanthamoeba castellanii str. Neff	14925721
ACA1_173250	mRNA	ACA1_173250	NW_004457702.1	444676	445973	R	ACA1_173250	complement(join(<444676..445236,445323..445531,445624..445697,445789..445840,445955..>445973))	Acanthamoeba castellanii str. Neff	14925722
ACA1_173260	mRNA	ACA1_173260	NW_004457702.1	446141	448430	R	ACA1_173260	complement(join(<446141..446346,446456..446694,446763..446896,447003..447175,447275..447373,447474..447584,447662..447857,447927..447994,448090..448150,448233..>448430))	Acanthamoeba castellanii str. Neff	14925723
ACA1_173270	mRNA	ACA1_173270	NW_004457702.1	448740	449600	D	ACA1_173270	join(<448740..448869,448998..449149,449211..449294,449368..449490,449574..>449600)	Acanthamoeba castellanii str. Neff	14925724
ACA1_173280	mRNA	ACA1_173280	NW_004457702.1	449810	451137	R	ACA1_173280	complement(join(<449810..450075,450146..450349,450424..450798,450873..>451137))	Acanthamoeba castellanii str. Neff	14925725
ACA1_173290	mRNA	ACA1_173290	NW_004457702.1	451278	453124	R	ACA1_173290	complement(join(<451278..451341,451472..452281,452394..452810,452844..>453124))	Acanthamoeba castellanii str. Neff	14925726
ACA1_173300	mRNA	ACA1_173300	NW_004457702.1	453404	454394	R	ACA1_173300	complement(join(<453404..453579,453652..453760,453887..454027,454115..454181,454240..>454394))	Acanthamoeba castellanii str. Neff	14925727
ACA1_173310	mRNA	ACA1_173310	NW_004457702.1	455089	461769	D	ACA1_173310	join(<455089..455121,455191..455295,455387..455614,455629..456010,456116..456522,456596..456748,456819..456929,457008..457103,457207..457332,457484..457618,457714..457989,458088..458198,458292..458357,458450..458557,458638..458715,458852..458962,459055..459174,459279..459395,459562..459691,459791..460044,460159..460243,460371..460610,460692..460903,460994..461141,461274..461444,461687..>461769)	Acanthamoeba castellanii str. Neff	14925728
ACA1_173320	mRNA	ACA1_173320	NW_004457702.1	463113	463869	D	ACA1_173320	join(<463113..463170,463303..463362,463519..463632,463730..>463869)	Acanthamoeba castellanii str. Neff	14925729
ACA1_173330	mRNA	ACA1_173330	NW_004457702.1	464065	465397	D	ACA1_173330	join(<464065..464257,464342..464475,464541..464627,464727..464807,464941..465043,465137..465227,465295..>465397)	Acanthamoeba castellanii str. Neff	14925730
ACA1_173340	mRNA	ACA1_173340	NW_004457702.1	465921	467229	D	ACA1_173340	join(<465921..465989,466079..466141,466247..466327,466427..466495,466594..466684,466973..467077,467171..>467229)	Acanthamoeba castellanii str. Neff	14925731
ACA1_173350	mRNA	ACA1_173350	NW_004457702.1	467419	469486	R	ACA1_173350	complement(join(<467419..467553,467683..467739,467829..467882,467978..468063,468154..468253,468349..468430,468589..468760,468859..468908,469027..469117,469221..469319,469384..>469486))	Acanthamoeba castellanii str. Neff	14925732
ACA1_173360	mRNA	ACA1_173360	NW_004457702.1	469639	470681	D	ACA1_173360	join(<469639..469840,469953..470032,470116..470190,470275..470328,470448..470520,470608..>470681)	Acanthamoeba castellanii str. Neff	14925733
ACA1_173370	mRNA	ACA1_173370	NW_004457702.1	472162	474602	D	ACA1_173370	join(<472162..472250,472368..472672,472816..>474602)	Acanthamoeba castellanii str. Neff	14925734
ACA1_173380	mRNA	ACA1_173380	NW_004457702.1	474676	475055	R	ACA1_173380	complement(join(<474676..474818,474884..>475055))	Acanthamoeba castellanii str. Neff	14925735
ACA1_173390	mRNA	ACA1_173390	NW_004457702.1	475318	478465	D	ACA1_173390	join(<475318..475955,476043..476105,476228..476291,476557..477236,477375..477474,477602..477662,477737..477903,478000..478241,478348..>478465)	Acanthamoeba castellanii str. Neff	14925736
ACA1_173400	mRNA	ACA1_173400	NW_004457702.1	479273	481982	D	ACA1_173400	join(<479273..479283,479295..479392,479406..479776,479881..479913,480180..481469,481674..>481982)	Acanthamoeba castellanii str. Neff	14925737
ACA1_173410	mRNA	ACA1_173410	NW_004457702.1	482051	490996	R	ACA1_173410	complement(join(<482051..482962,482976..483225,484512..484881,484899..485007,485269..486728,486746..487275,487302..487810,487901..487945,488012..488317,488366..488578,488606..488910,488974..489592,489614..489761,489942..489997,490068..490223,490349..>490996))	Acanthamoeba castellanii str. Neff	14925738
ACA1_173620	mRNA	ACA1_173620	NW_004457702.1	491315	491709	R	ACA1_173620	complement(join(<491315..491531,491600..>491709))	Acanthamoeba castellanii str. Neff	14925739
ACA1_173630	mRNA	ACA1_173630	NW_004457702.1	492529	498964	D	ACA1_173630	join(<492529..492633,492729..492803,493088..493146,493263..493326,493425..493538,493655..493750,493843..493947,494244..494394,494710..494815,494981..495043,495122..495224,495364..495625,495689..496720,496821..497755,497842..497979,498088..498195,498316..498594,498737..>498964)	Acanthamoeba castellanii str. Neff	14925740
ACA1_173640	mRNA	ACA1_173640	NW_004457702.1	499508	501406	D	ACA1_173640	join(<499508..499835,499934..500369,500446..500503,500597..500959,501052..501148,501225..>501406)	Acanthamoeba castellanii str. Neff	14925741
ACA1_173650	mRNA	ACA1_173650	NW_004457702.1	501851	506404	D	ACA1_173650	join(<501851..502508,502640..502716,502790..502900,502923..502982,502999..503142,503234..503331,503432..503625,503787..503958,504039..504150,504249..504506,504613..504679,504794..504907,505020..505285,505430..505565,505647..>506404)	Acanthamoeba castellanii str. Neff	14925742
ACA1_173660	mRNA	ACA1_173660	NW_004457702.1	507507	509967	R	ACA1_173660	complement(join(<507507..507668,507787..507903,508048..508166,508258..508420,508541..508861,508957..509153,509296..509398,509530..509628,509779..>509967))	Acanthamoeba castellanii str. Neff	14925743
ACA1_173670	mRNA	ACA1_173670	NW_004457702.1	510984	513143	D	ACA1_173670	join(<510984..511029,511227..511391,511491..511611,511735..511814,511958..512109,512177..512273,512371..512498,512584..512690,512828..512961,513091..>513143)	Acanthamoeba castellanii str. Neff	14925744
ACA1_173680	mRNA	ACA1_173680	NW_004457702.1	513357	519050	R	ACA1_173680	complement(join(<513357..513478,513666..513769,513878..514109,514174..514419,514518..514778,514910..515125,515295..515440,515539..515719,515812..516145,516251..516349,516428..516518,516585..516655,516736..516906,517008..517157,517258..517394,517483..517618,517720..517823,517916..518000,518091..518168,518299..518476,518562..518681,518769..518836,518973..>519050))	Acanthamoeba castellanii str. Neff	14925745
ACA1_173790	mRNA	ACA1_173790	NW_004457702.1	519632	521044	D	ACA1_173790	join(<519632..519683,519782..519853,519993..520084,520173..520286,520367..520498,520598..520699,520798..520856,520945..>521044)	Acanthamoeba castellanii str. Neff	14925746
ACA1_173800	mRNA	ACA1_173800	NW_004457702.1	521314	522497	D	ACA1_173800	join(<521314..521331,521423..521983,522099..>522497)	Acanthamoeba castellanii str. Neff	14925747
ACA1_173810	mRNA	ACA1_173810	NW_004457702.1	522683	525001	D	ACA1_173810	join(<522683..522815,522901..522952,523119..523227,523340..523388,523508..523603,523747..523952,524022..524152,524246..524394,524499..524533,524619..524718,524820..524896,524969..>525001)	Acanthamoeba castellanii str. Neff	14925748
ACA1_173820	mRNA	ACA1_173820	NW_004457702.1	525160	528763	R	ACA1_173820	complement(join(<525160..525370,525470..526082,526198..526279,526411..526533,526611..526713,526806..526918,527015..527092,527213..527250,527365..527439,527553..527724,527809..527838,527964..528119,528224..528275,528400..528455,528574..528597,528722..>528763))	Acanthamoeba castellanii str. Neff	14925749
ACA1_173830	mRNA	ACA1_173830	NW_004457702.1	529129	530899	D	ACA1_173830	join(<529129..529346,529443..529505,529606..529726,529802..530046,530121..530355,530465..>530899)	Acanthamoeba castellanii str. Neff	14925750
ACA1_173840	mRNA	ACA1_173840	NW_004457702.1	531527	531976	D	ACA1_173840	<531527..>531976	Acanthamoeba castellanii str. Neff	14925751
ACA1_173850	mRNA	ACA1_173850	NW_004457702.1	532107	533815	D	ACA1_173850	join(<532107..532223,532384..532537,532659..532739,532857..>533815)	Acanthamoeba castellanii str. Neff	14925752
ACA1_173860	mRNA	ACA1_173860	NW_004457702.1	534070	535186	R	ACA1_173860	complement(join(<534070..534448,534595..534688,534791..534951,535167..>535186))	Acanthamoeba castellanii str. Neff	14925753
ACA1_173870	mRNA	ACA1_173870	NW_004457702.1	535520	539634	R	ACA1_173870	complement(join(<535520..535672,535769..535879,535969..536079,536176..536281,536364..536458,536585..536656,536735..537025,537139..537309,537390..537567,537644..537810,537914..538039,538183..538290,538422..538505,538637..538728,538837..539053,539213..539355,539490..>539634))	Acanthamoeba castellanii str. Neff	14925754
ACA1_173880	mRNA	ACA1_173880	NW_004457702.1	539766	540262	D	ACA1_173880	join(<539766..540111,540183..>540262)	Acanthamoeba castellanii str. Neff	14925755
ACA1_173890	mRNA	ACA1_173890	NW_004457702.1	540593	542582	R	ACA1_173890	complement(join(<540593..540766,540876..541063,541133..541541,541650..541886,541988..542082,542250..542364,542478..>542582))	Acanthamoeba castellanii str. Neff	14925756
ACA1_173900	mRNA	ACA1_173900	NW_004457702.1	543017	545624	D	ACA1_173900	join(<543017..543324,543407..543588,543752..543848,543940..544001,544114..544214,544299..544990,545109..545228,545363..>545624)	Acanthamoeba castellanii str. Neff	14925757
ACA1_173910	mRNA	ACA1_173910	NW_004457702.1	546191	547611	D	ACA1_173910	join(<546191..546439,546565..546726,546853..546969,547057..547154,547235..547310,547405..>547611)	Acanthamoeba castellanii str. Neff	14925758
ACA1_173920	mRNA	ACA1_173920	NW_004457702.1	547785	548484	D	ACA1_173920	join(<547785..547832,547916..547976,548118..548145,548195..548369,548434..>548484)	Acanthamoeba castellanii str. Neff	14925759
ACA1_173930	mRNA	ACA1_173930	NW_004457702.1	548588	549363	D	ACA1_173930	join(<548588..548888,548987..549162,549298..>549363)	Acanthamoeba castellanii str. Neff	14925760
ACA1_173940	mRNA	ACA1_173940	NW_004457702.1	549453	553067	R	ACA1_173940	complement(join(<549453..549505,549566..549632,549761..549841,549938..550237,550341..550481,550575..550705,550804..550927,551064..551186,551274..551356,551441..551495,551605..551966,552073..552223,552300..552431,552524..552588,552665..552787,552893..>553067))	Acanthamoeba castellanii str. Neff	14925761
ACA1_173950	mRNA	ACA1_173950	NW_004457702.1	553401	557191	D	ACA1_173950	join(<553401..553448,553666..553805,553851..553974,554094..554231,554336..554665,554762..554823,554982..555227,555306..555426,555615..555665,555775..556030,556111..556965,557036..557150,557179..>557191)	Acanthamoeba castellanii str. Neff	14925762
ACA1_173960	mRNA	ACA1_173960	NW_004457702.1	557880	561203	D	ACA1_173960	join(<557880..558843,558946..559029,559107..559170,559341..559412,559501..559561,559639..559707,559807..559882,559988..560049,560213..560391,560480..560552,560656..560758,560884..>561203)	Acanthamoeba castellanii str. Neff	14925763
ACA1_173970	mRNA	ACA1_173970	NW_004457702.1	561360	564172	D	ACA1_173970	join(<561360..561495,561581..561603,561699..561740,561855..562086,562191..562272,562443..562536,562625..562952,563045..563165,563246..563443,563553..563919,564017..>564172)	Acanthamoeba castellanii str. Neff	14925764
ACA1_173980	mRNA	ACA1_173980	NW_004457702.1	564299	566438	R	ACA1_173980	complement(join(<564299..564374,564462..564541,564687..564749,564871..564972,565100..565195,565306..565443,565558..565611,565738..565980,566109..>566438))	Acanthamoeba castellanii str. Neff	14925765
ACA1_173990	mRNA	ACA1_173990	NW_004457702.1	567006	568615	D	ACA1_173990	join(<567006..567183,567276..567506,567620..567796,567876..568162,568225..568237,568416..>568615)	Acanthamoeba castellanii str. Neff	14925766
ACA1_174000	mRNA	ACA1_174000	NW_004457702.1	568911	569295	R	ACA1_174000	complement(join(<568911..569020,569125..569158,569236..>569295))	Acanthamoeba castellanii str. Neff	14925767
ACA1_174010	mRNA	ACA1_174010	NW_004457702.1	569525	573473	R	ACA1_174010	complement(join(<569525..569758,569860..571311,571742..571816,571929..572004,572130..572223,572344..572451,572566..572622,572756..572836,573058..573135,573302..>573473))	Acanthamoeba castellanii str. Neff	14925768
ACA1_174020	mRNA	ACA1_174020	NW_004457702.1	574116	579364	D	ACA1_174020	join(<574116..574191,574371..574492,574592..574696,574832..574990,575083..575216,575273..575342,575457..575633,575721..576234,576370..576493,576582..576692,576792..577256,577351..577874,577960..578190,578327..578459,578560..578701,578846..>579364)	Acanthamoeba castellanii str. Neff	14925769
ACA1_174030	mRNA	ACA1_174030	NW_004457702.1	579568	580480	R	ACA1_174030	complement(join(<579568..579594,579734..580086,580178..580222,580324..>580480))	Acanthamoeba castellanii str. Neff	14925770
ACA1_174040	mRNA	ACA1_174040	NW_004457702.1	580957	587062	R	ACA1_174040	complement(join(<580957..581343,581476..581630,581810..582067,582232..582306,582434..582589,582775..582841,583014..583144,583297..583448,583602..583669,583752..584027,584117..584176,584280..584483,584617..584831,584976..585155,585295..585390,585507..585590,585729..585983,586096..586167,586250..586408,586514..586577,586705..586790,586912..>587062))	Acanthamoeba castellanii str. Neff	14925771
ACA1_174050	mRNA	ACA1_174050	NW_004457702.1	587340	589459	R	ACA1_174050	complement(join(<587340..588256,588404..588559,588721..588880,588917..589005,589184..589289,589433..>589459))	Acanthamoeba castellanii str. Neff	14925772
ACA1_174060	mRNA	ACA1_174060	NW_004457702.1	589896	592830	D	ACA1_174060	join(<589896..590327,590507..590559,590667..590785,590952..591040,591264..591358,591599..591773,591978..592149,592357..592473,592556..>592830)	Acanthamoeba castellanii str. Neff	14925773
ACA1_174080	mRNA	ACA1_174080	NW_004457702.1	602701	603513	R	ACA1_174080	complement(join(<602701..602739,602888..603013,603120..603293,603418..>603513))	Acanthamoeba castellanii str. Neff	14925775
ACA1_174090	mRNA	ACA1_174090	NW_004457702.1	603741	606037	D	ACA1_174090	join(<603741..604092,604229..604376,604510..604600,604701..604785,604972..605184,605311..605541,605627..605739,605849..>606037)	Acanthamoeba castellanii str. Neff	14925776
ACA1_174100	mRNA	ACA1_174100	NW_004457702.1	610167	612907	R	ACA1_174100	complement(join(<610167..610391,610452..610651,610718..610811,610871..610992,611070..611205,611285..611387,611489..611588,611683..611805,611900..612023,612113..612180,612318..612490,612575..612759,612869..>612907))	Acanthamoeba castellanii str. Neff	14925777
ACA1_174110	mRNA	ACA1_174110	NW_004457702.1	613930	615000	D	ACA1_174110	join(<613930..614151,614253..614339,614453..614529,614650..614875,614965..>615000)	Acanthamoeba castellanii str. Neff	14925778
ACA1_174120	mRNA	ACA1_174120	NW_004457702.1	615081	618400	D	ACA1_174120	join(<615081..615172,615370..615502,615632..615893,616052..616213,616384..616499,616686..616788,617060..617217,617362..617476,617590..617766,617895..617947,618048..618207,618270..>618400)	Acanthamoeba castellanii str. Neff	14925779
ACA1_174130	mRNA	ACA1_174130	NW_004457702.1	618536	620583	R	ACA1_174130	complement(join(<618536..618632,618698..618819,618917..619038,619158..619526,619709..619845,619989..620269,620431..>620583))	Acanthamoeba castellanii str. Neff	14925780
ACA1_174150	mRNA	ACA1_174150	NW_004457702.1	629227	630701	R	ACA1_174150	complement(join(<629227..629312,629412..629625,629693..629790,629948..>630701))	Acanthamoeba castellanii str. Neff	14925782
ACA1_174160	mRNA	ACA1_174160	NW_004457702.1	631125	631940	D	ACA1_174160	<631125..>631940	Acanthamoeba castellanii str. Neff	14925783
ACA1_174170	mRNA	ACA1_174170	NW_004457702.1	632143	633207	R	ACA1_174170	complement(join(<632143..632361,632468..632679,632835..632983,633101..>633207))	Acanthamoeba castellanii str. Neff	14925784
ACA1_174180	mRNA	ACA1_174180	NW_004457702.1	633420	634592	D	ACA1_174180	join(<633420..633511,633629..633984,634066..634176,634270..>634592)	Acanthamoeba castellanii str. Neff	14925785
ACA1_174190	mRNA	ACA1_174190	NW_004457702.1	635011	638493	R	ACA1_174190	complement(join(<635011..635164,635424..635593,635766..635864,635990..636401,636507..636646,636862..636963,637164..637235,637344..637429,637522..637660,637821..637978,638130..>638493))	Acanthamoeba castellanii str. Neff	14925786
ACA1_174200	mRNA	ACA1_174200	NW_004457702.1	638769	640901	R	ACA1_174200	complement(join(<638769..638941,639015..639408,639576..639607,639747..639847,639950..640086,640208..640250,640355..640614,640818..>640901))	Acanthamoeba castellanii str. Neff	14925787
ACA1_174210	mRNA	ACA1_174210	NW_004457702.1	641139	645045	D	ACA1_174210	join(<641139..641230,641356..641491,641622..642915,643056..643110,643211..643281,643457..643605,643688..643874,643994..>645045)	Acanthamoeba castellanii str. Neff	14925788
ACA1_174220	mRNA	ACA1_174220	NW_004457702.1	645245	652324	D	ACA1_174220	join(<645245..646511,646690..646847,646938..647027,647116..647185,647287..647385,647584..647684,647757..647849,648007..648113,648197..648453,648595..648716,648839..648961,649067..649169,649272..649429,649503..649679,649877..>652324)	Acanthamoeba castellanii str. Neff	14925789
ACA1_174230	mRNA	ACA1_174230	NW_004457702.1	652419	652996	D	ACA1_174230	join(<652419..652526,652597..652700,652762..>652996)	Acanthamoeba castellanii str. Neff	14925790
ACA1_174240	mRNA	ACA1_174240	NW_004457702.1	653178	654031	R	ACA1_174240	complement(join(<653178..653383,653462..653698,653875..>654031))	Acanthamoeba castellanii str. Neff	14925791
ACA1_174250	mRNA	ACA1_174250	NW_004457702.1	654551	656454	R	ACA1_174250	complement(join(<654551..655187,655278..655804,656077..>656454))	Acanthamoeba castellanii str. Neff	14925792
ACA1_174260	mRNA	ACA1_174260	NW_004457702.1	656919	658645	R	ACA1_174260	complement(join(<656919..657893,658139..>658645))	Acanthamoeba castellanii str. Neff	14925793
ACA1_174270	mRNA	ACA1_174270	NW_004457702.1	659469	661089	R	ACA1_174270	complement(join(<659469..659502,659519..660171,660322..>661089))	Acanthamoeba castellanii str. Neff	14925794
ACA1_174280	mRNA	ACA1_174280	NW_004457702.1	661199	661741	R	ACA1_174280	complement(<661199..>661741)	Acanthamoeba castellanii str. Neff	14925795
ACA1_174290	mRNA	ACA1_174290	NW_004457702.1	662811	663566	D	ACA1_174290	join(<662811..662831,662881..663231,663248..663263,663364..>663566)	Acanthamoeba castellanii str. Neff	14925796
ACA1_174300	mRNA	ACA1_174300	NW_004457702.1	664290	664856	D	ACA1_174300	join(<664290..664482,664562..664726,664786..>664856)	Acanthamoeba castellanii str. Neff	14925797
ACA1_174320	mRNA	ACA1_174320	NW_004457702.1	672622	675618	R	ACA1_174320	complement(join(<672622..672925,673030..673157,673172..673200,673237..673384,673525..673669,673749..673833,673926..674066,674146..674323,674424..674632,674744..674909,674995..675198,675286..>675618))	Acanthamoeba castellanii str. Neff	14925799
ACA1_174330	mRNA	ACA1_174330	NW_004457702.1	675854	677979	D	ACA1_174330	join(<675854..675889,675975..676134,676198..676265,676366..676496,676691..676835,676971..677222,677329..677514,677591..677827,677920..>677979)	Acanthamoeba castellanii str. Neff	14925800
ACA1_174340	mRNA	ACA1_174340	NW_004457702.1	678224	679565	D	ACA1_174340	join(<678224..678640,678733..678966,679050..>679565)	Acanthamoeba castellanii str. Neff	14925801
ACA1_174350	mRNA	ACA1_174350	NW_004457702.1	679701	680449	R	ACA1_174350	complement(join(<679701..679773,679890..680064,680126..680185,680248..>680449))	Acanthamoeba castellanii str. Neff	14925802
ACA1_174360	mRNA	ACA1_174360	NW_004457702.1	681622	690002	D	ACA1_174360	join(<681622..681790,681894..681973,682016..682268,682380..682494,682647..682741,682871..682956,683053..683181,683285..683434,683541..683619,683743..683850,683982..684230,684346..684707,684920..685099,685182..685277,685390..685696,685857..685991,686060..686319,686418..686633,686766..686906,687064..687260,687313..687443,687531..687631,687759..687848,687944..688066,688148..688255,688381..688494,688665..688820,688950..689131,689232..689466,689595..689703,689821..>690002)	Acanthamoeba castellanii str. Neff	14925803
ACA1_174370	mRNA	ACA1_174370	NW_004457702.1	690411	690900	D	ACA1_174370	join(<690411..690521,690538..>690900)	Acanthamoeba castellanii str. Neff	14925804
ACA1_174380	mRNA	ACA1_174380	NW_004457702.1	691020	692380	D	ACA1_174380	join(<691020..691296,691402..691509,691982..692069,692167..692264,692340..>692380)	Acanthamoeba castellanii str. Neff	14925805
ACA1_174390	mRNA	ACA1_174390	NW_004457702.1	692445	695127	R	ACA1_174390	complement(join(<692445..693065,693186..693290,693419..693563,693663..693823,693930..694028,694093..694296,694426..694569,694716..694835,694981..>695127))	Acanthamoeba castellanii str. Neff	14925806
ACA1_174400	mRNA	ACA1_174400	NW_004457702.1	696186	699424	D	ACA1_174400	join(<696186..696255,696568..696660,696682..696755,696857..696940,697101..697535,697666..697800,697881..698009,698174..698264,698376..698584,698660..698779,698877..698963,699067..699184,699291..>699424)	Acanthamoeba castellanii str. Neff	14925807
ACA1_174410	mRNA	ACA1_174410	NW_004457702.1	699627	701959	R	ACA1_174410	complement(join(<699627..699829,699949..700074,700165..700361,700456..700522,700585..700656,700753..700864,700965..701041,701120..701240,701370..701429,701610..701747,701855..>701959))	Acanthamoeba castellanii str. Neff	14925808
ACA1_174420	mRNA	ACA1_174420	NW_004457702.1	702784	707435	D	ACA1_174420	join(<702784..703438,703686..703786,704389..704439,704561..704764,704896..705060,705192..705401,705496..705666,705928..706041,706114..706402,706592..706944,707020..707277,707355..>707435)	Acanthamoeba castellanii str. Neff	14925809
ACA1_174430	mRNA	ACA1_174430	NW_004457702.1	707714	708275	D	ACA1_174430	join(<707714..707948,708055..>708275)	Acanthamoeba castellanii str. Neff	14925810
ACA1_174440	mRNA	ACA1_174440	NW_004457702.1	708499	710156	R	ACA1_174440	complement(join(<708499..708597,708676..708751,708844..709030,709166..709239,709357..709525,709603..709874,709978..>710156))	Acanthamoeba castellanii str. Neff	14925811
ACA1_174450	mRNA	ACA1_174450	NW_004457702.1	710290	710985	D	ACA1_174450	<710290..>710985	Acanthamoeba castellanii str. Neff	14925812
ACA1_174460	mRNA	ACA1_174460	NW_004457702.1	711809	713033	D	ACA1_174460	join(<711809..711909,712010..712130,712290..712418,712532..712639,712832..712909,712950..>713033)	Acanthamoeba castellanii str. Neff	14925813
ACA1_174470	mRNA	ACA1_174470	NW_004457702.1	713369	716077	D	ACA1_174470	join(<713369..713599,713665..714131,714207..714834,714925..715134,715252..715495,715581..715648,715706..715855,715949..>716077)	Acanthamoeba castellanii str. Neff	14925814
ACA1_174480	mRNA	ACA1_174480	NW_004457702.1	716706	718297	R	ACA1_174480	complement(join(<716706..717073,717228..717375,717474..717862,717985..>718297))	Acanthamoeba castellanii str. Neff	14925815
ACA1_174490	mRNA	ACA1_174490	NW_004457702.1	718699	720327	R	ACA1_174490	complement(join(<718699..718842,718934..719024,719111..719193,719305..719381,719459..719636,719699..719782,719866..719942,720024..>720327))	Acanthamoeba castellanii str. Neff	14925816
ACA1_174500	mRNA	ACA1_174500	NW_004457702.1	720903	722070	R	ACA1_174500	complement(join(<720903..721055,721136..721249,721360..721479,721591..721842,721975..>722070))	Acanthamoeba castellanii str. Neff	14925817
ACA1_174510	mRNA	ACA1_174510	NW_004457702.1	722389	725510	D	ACA1_174510	join(<722389..722844,722869..722929,723045..723127,723231..723359,723442..723523,723602..723703,723795..723862,723976..724133,724266..724407,724538..724834,724946..725016,725142..725290,725404..>725510)	Acanthamoeba castellanii str. Neff	14925818
ACA1_174520	mRNA	ACA1_174520	NW_004457702.1	725568	728425	R	ACA1_174520	complement(join(<725568..725938,726047..726167,726263..726372,726477..726612,726783..726853,726964..727079,727238..727307,727437..727710,727844..>728425))	Acanthamoeba castellanii str. Neff	14925819
ACA1_174530	mRNA	ACA1_174530	NW_004457702.1	728859	730644	R	ACA1_174530	complement(join(<728859..728963,729076..729222,729313..729494,729607..729730,729922..730058,730182..730392,730636..>730644))	Acanthamoeba castellanii str. Neff	14925820
ACA1_174540	mRNA	ACA1_174540	NW_004457702.1	731054	732886	R	ACA1_174540	complement(join(<731054..731377,731486..731587,731742..731798,731900..732033,732146..732266,732351..732520,732607..732772,732881..>732886))	Acanthamoeba castellanii str. Neff	14925821
ACA1_174550	mRNA	ACA1_174550	NW_004457702.1	735352	737677	R	ACA1_174550	complement(join(<735352..735885,736035..736136,736264..736338,736408..736496,736644..736773,736894..737063,737159..737324,737567..>737677))	Acanthamoeba castellanii str. Neff	14925822
ACA1_174560	mRNA	ACA1_174560	NW_004457702.1	737880	739564	R	ACA1_174560	complement(join(<737880..738048,738243..738363,738442..738569,738749..738953,739051..739201,739273..739385,739486..>739564))	Acanthamoeba castellanii str. Neff	14925823
ACA1_174570	mRNA	ACA1_174570	NW_004457702.1	739912	740855	R	ACA1_174570	complement(join(<739912..740012,740150..>740855))	Acanthamoeba castellanii str. Neff	14925824
ACA1_174580	mRNA	ACA1_174580	NW_004457702.1	741782	743236	R	ACA1_174580	complement(join(<741782..741842,741937..742076,742173..742359,742426..742640,742841..742969,743057..>743236))	Acanthamoeba castellanii str. Neff	14925825
ACA1_174590	mRNA	ACA1_174590	NW_004457702.1	743835	744476	D	ACA1_174590	join(<743835..743997,744179..744238,744316..>744476)	Acanthamoeba castellanii str. Neff	14925826
ACA1_174600	mRNA	ACA1_174600	NW_004457702.1	744705	748260	D	ACA1_174600	join(<744705..744997,745160..745262,745368..745467,745604..745751,745873..746017,746130..746454,746618..746784,746890..747019,747152..747415,747553..747619,747727..748054,748123..>748260)	Acanthamoeba castellanii str. Neff	14925827
ACA1_174610	mRNA	ACA1_174610	NW_004457702.1	748601	749574	R	ACA1_174610	complement(join(<748601..748689,748788..749073,749184..749314,749523..>749574))	Acanthamoeba castellanii str. Neff	14925828
ACA1_174620	mRNA	ACA1_174620	NW_004457702.1	749953	750815	R	ACA1_174620	complement(join(<749953..750006,750084..750143,750212..750292,750422..750521,750620..750675,750783..>750815))	Acanthamoeba castellanii str. Neff	14925829
ACA1_174630	mRNA	ACA1_174630	NW_004457702.1	750895	753528	D	ACA1_174630	join(<750895..750968,751097..751178,751362..751479,751687..751856,751962..752042,752185..752334,752444..752539,752642..752721,752809..753056,753150..753287,753401..>753528)	Acanthamoeba castellanii str. Neff	14925830
ACA1_174640	mRNA	ACA1_174640	NW_004457702.1	754438	755421	R	ACA1_174640	complement(join(<754438..754644,754764..755282,755359..>755421))	Acanthamoeba castellanii str. Neff	14925831
ACA1_174660	mRNA	ACA1_174660	NW_004457702.1	757009	758578	D	ACA1_174660	join(<757009..757087,757192..757290,757379..757452,757672..757992,758130..758237,758402..>758578)	Acanthamoeba castellanii str. Neff	14925833
ACA1_174670	mRNA	ACA1_174670	NW_004457702.1	759179	760450	R	ACA1_174670	complement(join(<759179..759453,759554..760248,760365..>760450))	Acanthamoeba castellanii str. Neff	14925834
ACA1_174680	mRNA	ACA1_174680	NW_004457702.1	760787	762769	R	ACA1_174680	complement(join(<760787..760858,760951..761015,761077..761196,761417..761468,761571..761763,761860..762007,762102..762159,762387..762482,762605..>762769))	Acanthamoeba castellanii str. Neff	14925835
ACA1_174690	mRNA	ACA1_174690	NW_004457702.1	763226	765751	D	ACA1_174690	join(<763226..763342,763465..763572,763646..763741,763817..763956,763991..764177,764252..764347,764423..764538,764596..764700,764768..764862,764945..765036,765104..>765751)	Acanthamoeba castellanii str. Neff	14925836
ACA1_174700	mRNA	ACA1_174700	NW_004457702.1	766269	767964	D	ACA1_174700	join(<766269..766395,766455..766526,766593..766669,766753..766818,766919..767007,767106..767355,767464..767573,767681..767823,767921..>767964)	Acanthamoeba castellanii str. Neff	14925837
ACA1_174710	mRNA	ACA1_174710	NW_004457702.1	768320	778657	D	ACA1_174710	join(<768320..768349,768563..768727,768814..768930,769034..769138,769257..769529,769653..769862,769960..770237,770313..770411,770524..770625,770741..771141,771280..771423,771512..771642,771735..772021,772135..772210,772302..772399,772497..772633,772743..772764,772775..772875,772980..773053,773183..773237,773358..774652,774739..775360,775477..775618,775704..775796,775931..775997,776098..776201,776290..776396,776478..776582,776702..776765,776884..777026,777166..777278,777364..777567,777649..777767,777848..778079,778193..>778657)	Acanthamoeba castellanii str. Neff	14925838
ACA1_174720	mRNA	ACA1_174720	NW_004457702.1	778764	781280	D	ACA1_174720	join(<778764..778863,778947..779066,779173..779230,779340..779577,779693..779873,780014..780157,780278..780392,780611..>781280)	Acanthamoeba castellanii str. Neff	14925839
ACA1_174730	mRNA	ACA1_174730	NW_004457702.1	781896	784486	R	ACA1_174730	complement(join(<781896..782030,782128..782301,782403..782528,782724..782776,782874..783033,783157..783231,783328..783439,783519..783690,783815..783910,784000..784199,784302..>784486))	Acanthamoeba castellanii str. Neff	14925840
ACA1_174740	mRNA	ACA1_174740	NW_004457702.1	784668	787077	R	ACA1_174740	complement(join(<784668..784868,784953..785078,785185..785237,785342..785501,785617..785706,785797..785908,785983..786154,786280..786375,786499..786636,786748..786809,786893..>787077))	Acanthamoeba castellanii str. Neff	14925841
ACA1_174750	mRNA	ACA1_174750	NW_004457702.1	787877	792324	D	ACA1_174750	join(<787877..787932,788007..788196,788312..788374,788463..788780,788886..788984,789005..789133,789348..789407,789482..789559,789629..789822,789915..789963,790105..790287,790377..790603,790692..790869,790959..791176,791252..791376,791481..791788,791926..>792324)	Acanthamoeba castellanii str. Neff	14925842
ACA1_174760	mRNA	ACA1_174760	NW_004457702.1	792468	792749	D	ACA1_174760	<792468..>792749	Acanthamoeba castellanii str. Neff	14925843
ACA1_174770	mRNA	ACA1_174770	NW_004457702.1	792830	795134	R	ACA1_174770	complement(join(<792830..792851,792865..793090,793179..793370,793445..793622,793728..793805,793903..793976,794042..794138,794201..794277,794368..794483,794557..794629,794707..794779,794861..794982,795089..>795134))	Acanthamoeba castellanii str. Neff	14925844
ACA1_174780	mRNA	ACA1_174780	NW_004457702.1	795387	796824	R	ACA1_174780	complement(join(<795387..795423,795516..795639,795803..795928,796074..796181,796276..796381,796509..796589,796789..>796824))	Acanthamoeba castellanii str. Neff	14925845
ACA1_174790	mRNA	ACA1_174790	NW_004457702.1	796952	798448	R	ACA1_174790	complement(<796952..>798448)	Acanthamoeba castellanii str. Neff	14925846
ACA1_174800	mRNA	ACA1_174800	NW_004457702.1	798961	799245	R	ACA1_174800	complement(join(<798961..799136,799161..>799245))	Acanthamoeba castellanii str. Neff	14925847
ACA1_174810	mRNA	ACA1_174810	NW_004457702.1	800008	803954	D	ACA1_174810	join(<800008..800429,800600..800778,801141..801303,801388..801463,801556..801613,801714..801799,801901..802064,802185..803732,803810..>803954)	Acanthamoeba castellanii str. Neff	14925848
ACA1_174820	mRNA	ACA1_174820	NW_004457702.1	804268	806386	D	ACA1_174820	join(<804268..804508,804647..805082,805173..805288,805396..805494,805557..>806386)	Acanthamoeba castellanii str. Neff	14925849
ACA1_174830	mRNA	ACA1_174830	NW_004457702.1	806934	807837	R	ACA1_174830	complement(join(<806934..806973,807069..807218,807289..807482,807554..807701,807725..>807837))	Acanthamoeba castellanii str. Neff	14925850
ACA1_174840	mRNA	ACA1_174840	NW_004457702.1	809210	810247	R	ACA1_174840	complement(join(<809210..809359,809428..810121,810210..>810247))	Acanthamoeba castellanii str. Neff	14925851
ACA1_174850	mRNA	ACA1_174850	NW_004457702.1	810355	812169	D	ACA1_174850	join(<810355..810394,810532..810671,810858..811173,811301..811408,811537..811627,811733..811896,811997..>812169)	Acanthamoeba castellanii str. Neff	14925852
ACA1_174870	mRNA	ACA1_174870	NW_004457702.1	813639	818242	D	ACA1_174870	join(<813639..813825,813929..814102,814366..814663,814763..814881,814963..815053,815150..815319,815370..815547,815682..815806,815877..815943,816035..816115,816187..816241,816344..816415,816540..816618,816754..816834,816980..817156,817213..817324,817489..>818242)	Acanthamoeba castellanii str. Neff	14925854
ACA1_174880	mRNA	ACA1_174880	NW_004457702.1	818367	821260	R	ACA1_174880	complement(join(<818367..818739,818838..818949,819066..819245,819329..819421,819737..819815,819883..819954,820040..820094,820178..820258,820327..820393,820488..820612,820693..820843,820916..821070,821208..>821260))	Acanthamoeba castellanii str. Neff	14925855
ACA1_174890	mRNA	ACA1_174890	NW_004457702.1	822699	824252	R	ACA1_174890	complement(join(<822699..822848,822938..823126,823219..823407,823519..823623,823728..>824252))	Acanthamoeba castellanii str. Neff	14925856
ACA1_174900	mRNA	ACA1_174900	NW_004457702.1	825451	826356	R	ACA1_174900	complement(join(<825451..825747,825844..825982,826066..826211,826288..>826356))	Acanthamoeba castellanii str. Neff	14925857
ACA1_174910	mRNA	ACA1_174910	NW_004457702.1	826818	827902	D	ACA1_174910	join(<826818..826929,827011..827254,827329..>827902)	Acanthamoeba castellanii str. Neff	14925858
ACA1_174930	mRNA	ACA1_174930	NW_004457702.1	829882	831773	R	ACA1_174930	complement(join(<829882..830013,830073..830177,830264..830378,830553..830708,830863..831159,831278..831632,831728..>831773))	Acanthamoeba castellanii str. Neff	14925860
ACA1_175040	mRNA	ACA1_175040	NW_004457702.1	832328	836901	D	ACA1_175040	join(<832328..832870,833000..833091,833208..833432,833470..833893,834004..834129,834295..834355,834466..834674,834803..834945,835069..835263,835339..835402,835487..835687,835777..835933,836199..836347,836466..836744,836881..>836901)	Acanthamoeba castellanii str. Neff	14925861
ACA1_175050	mRNA	ACA1_175050	NW_004457702.1	837017	839944	R	ACA1_175050	complement(join(<837017..837143,837239..837351,837458..837646,837730..838030,838109..838308,838411..838514,838620..838828,838938..839119,839194..839295,839378..839515,839770..839828,839908..>839944))	Acanthamoeba castellanii str. Neff	14925862
ACA1_175060	mRNA	ACA1_175060	NW_004457702.1	840348	843766	D	ACA1_175060	join(<840348..840464,840735..840935,841013..841360,841435..841881,841974..842204,842284..842658,842725..842984,843236..843562,843667..>843766)	Acanthamoeba castellanii str. Neff	14925863
ACA1_175070	mRNA	ACA1_175070	NW_004457702.1	844334	848195	D	ACA1_175070	join(<844334..844415,844439..844485,844544..844960,845064..845249,845357..845513,845667..845748,845892..845969,846082..846322,846443..846535,846653..846714,846928..847039,847182..847379,847507..847705,847829..847929,848028..>848195)	Acanthamoeba castellanii str. Neff	14925864
ACA1_175080	mRNA	ACA1_175080	NW_004457702.1	848506	851037	R	ACA1_175080	complement(join(<848506..848583,848671..848833,848940..849086,849206..849297,849456..849551,849666..849694,849857..849950,850045..850114,850205..850274,850393..850619,850865..>851037))	Acanthamoeba castellanii str. Neff	14925865
ACA1_175090	mRNA	ACA1_175090	NW_004457702.1	851213	853959	R	ACA1_175090	complement(join(<851213..851297,851425..851795,851963..852095,852189..852327,852445..852799,852863..852988,853067..853805,853937..>853959))	Acanthamoeba castellanii str. Neff	14925866
ACA1_175100	mRNA	ACA1_175100	NW_004457702.1	854313	865526	R	ACA1_175100	complement(join(<854313..854414,854522..854641,854744..854824,854904..855087,855210..855492,855601..855793,855885..856049,856129..856213,856295..856431,856579..856727,856808..856912,857013..857304,857395..857517,857630..857785,857930..858121,858267..858353,858432..858591,858713..858815,858929..859126,859267..859438,859542..859770,859853..860064,860113..860220,860317..860401,860509..860644,860757..861518,861611..861743,861959..862122,862224..862329,862433..862671,862780..863041,863134..863286,863389..863466,863561..863826,863893..864025,864126..864229,864310..864394,864824..864992,865143..865339,865449..>865526))	Acanthamoeba castellanii str. Neff	14925867
ACA1_175110	mRNA	ACA1_175110	NW_004457702.1	866236	867299	R	ACA1_175110	complement(join(<866236..866250,866283..866353,866454..866591,866680..866763,866826..866898,866976..867082,867170..>867299))	Acanthamoeba castellanii str. Neff	14925868
ACA1_175120	mRNA	ACA1_175120	NW_004457702.1	868271	869370	D	ACA1_175120	join(<868271..868339,868428..868532,868645..868745,868832..868931,869018..869200,869281..>869370)	Acanthamoeba castellanii str. Neff	14925869
ACA1_175130	mRNA	ACA1_175130	NW_004457702.1	869656	871067	D	ACA1_175130	join(<869656..869713,869849..869921,870043..870128,870284..870364,870498..870592,870683..870739,870800..870892,870984..>871067)	Acanthamoeba castellanii str. Neff	14925870
ACA1_175140	mRNA	ACA1_175140	NW_004457702.1	871548	872051	R	ACA1_175140	complement(<871548..>872051)	Acanthamoeba castellanii str. Neff	14925871
ACA1_175150	mRNA	ACA1_175150	NW_004457702.1	872483	877716	D	ACA1_175150	join(<872483..872539,872618..872774,872837..872915,872990..873078,873160..873518,873759..873842,873893..874159,874252..874347,874438..874506,874603..874686,874791..875135,875267..875327,875615..875731,875854..875966,876114..876207,876310..876413,876530..876622,876764..876922,877043..877482,877566..>877716)	Acanthamoeba castellanii str. Neff	14925872
ACA1_175160	mRNA	ACA1_175160	NW_004457702.1	877841	879744	R	ACA1_175160	complement(join(<877841..878593,878609..878633,878729..>879744))	Acanthamoeba castellanii str. Neff	14925873
ACA1_175170	mRNA	ACA1_175170	NW_004457702.1	880450	883803	D	ACA1_175170	join(<880450..880491,880583..880690,880883..880994,881077..881119,881308..881519,881652..881764,882089..882236,882418..882491,882717..882791,882890..882990,883078..883159,883274..883462,883575..883646,883729..>883803)	Acanthamoeba castellanii str. Neff	14925874
ACA1_175180	mRNA	ACA1_175180	NW_004457702.1	883956	886247	R	ACA1_175180	complement(join(<883956..884221,884375..884473,884539..884659,884733..884817,884952..885177,885287..885424,885507..885607,885675..885912,886001..886120,886196..>886247))	Acanthamoeba castellanii str. Neff	14925875
ACA1_175190	mRNA	ACA1_175190	NW_004457702.1	886652	890962	R	ACA1_175190	complement(join(<886652..886865,886942..887022,887138..887219,887303..887415,887521..887687,887765..887968,888080..888169,888273..888409,888487..888583,888653..888787,888889..889017,889109..889204,889264..889336,889426..889550,889632..889774,889837..889957,890045..890176,890305..890406,890537..>890962))	Acanthamoeba castellanii str. Neff	14925876
ACA1_175200	mRNA	ACA1_175200	NW_004457702.1	891499	893500	D	ACA1_175200	join(<891499..891550,891662..891815,891940..892300,892427..892576,892660..892774,892843..892915,892989..893086,893174..893274,893348..>893500)	Acanthamoeba castellanii str. Neff	14925877
ACA1_175210	mRNA	ACA1_175210	NW_004457702.1	893861	894360	R	ACA1_175210	complement(join(<893861..893982,894030..>894360))	Acanthamoeba castellanii str. Neff	14925878
ACA1_175220	mRNA	ACA1_175220	NW_004457702.1	894887	895810	D	ACA1_175220	join(<894887..895071,895154..895268,895356..895497,895582..895662,895761..>895810)	Acanthamoeba castellanii str. Neff	14925879
ACA1_175230	mRNA	ACA1_175230	NW_004457702.1	896803	897941	D	ACA1_175230	join(<896803..896837,896920..897044,897137..897406,897511..897665,897737..897840,897923..>897941)	Acanthamoeba castellanii str. Neff	14925880
ACA1_175240	mRNA	ACA1_175240	NW_004457702.1	898368	899469	D	ACA1_175240	join(<898368..898440,898513..898596,898671..898728,898814..898952,899087..899197,899284..>899469)	Acanthamoeba castellanii str. Neff	14925881
ACA1_175250	mRNA	ACA1_175250	NW_004457702.1	899871	900387	D	ACA1_175250	join(<899871..899981,900139..>900387)	Acanthamoeba castellanii str. Neff	14925882
ACA1_175260	mRNA	ACA1_175260	NW_004457702.1	901092	905032	R	ACA1_175260	complement(join(<901092..901448,901572..901710,901829..902010,902155..902208,902291..902557,902637..902990,903065..903310,903407..903903,903990..904084,904199..904326,904428..904673,904790..>905032))	Acanthamoeba castellanii str. Neff	14925883
ACA1_175270	mRNA	ACA1_175270	NW_004457702.1	905545	906270	R	ACA1_175270	complement(<905545..>906270)	Acanthamoeba castellanii str. Neff	14925884
ACA1_175280	mRNA	ACA1_175280	NW_004457702.1	906622	908619	D	ACA1_175280	join(<906622..907042,907155..907267,907362..907494,907572..907705,907785..907913,908011..>908619)	Acanthamoeba castellanii str. Neff	14925885
ACA1_175290	mRNA	ACA1_175290	NW_004457702.1	909020	913653	D	ACA1_175290	join(<909020..909044,909176..909445,909524..909641,909759..909914,910039..910695,910789..911969,912315..912442,912588..912677,912800..912988,913094..913243,913336..>913653)	Acanthamoeba castellanii str. Neff	14925886
ACA1_175300	mRNA	ACA1_175300	NW_004457702.1	914049	919025	D	ACA1_175300	join(<914049..914599,914662..914797,914890..915015,915101..915679,915776..915890,915980..916822,916910..916987,917074..917192,917275..917788,917883..918076,918166..918255,918345..918536,918633..>919025)	Acanthamoeba castellanii str. Neff	14925887
ACA1_175310	mRNA	ACA1_175310	NW_004457702.1	919203	920009	D	ACA1_175310	join(<919203..919281,919342..>920009)	Acanthamoeba castellanii str. Neff	14925888
ACA1_175320	mRNA	ACA1_175320	NW_004457702.1	920151	924110	D	ACA1_175320	join(<920151..920261,920397..920683,920777..920948,921023..921188,921259..921704,921779..922030,922154..922300,922397..922788,922872..923375,923493..923655,923723..923825,923959..>924110)	Acanthamoeba castellanii str. Neff	14925889
ACA1_175330	mRNA	ACA1_175330	NW_004457702.1	924335	933821	D	ACA1_175330	join(<924335..924695,925109..925304,925463..925591,925790..925913,926028..926141,926231..926437,926547..926873,926957..927016,927088..927164,927296..927644,927733..927959,928054..928125,928223..928402,928484..928582,928673..928805,928900..929151,929210..929308,929366..929503,929606..929678,929794..929870,929976..930186,930261..930437,930547..931883,931989..>933821)	Acanthamoeba castellanii str. Neff	14925890
ACA1_175350	mRNA	ACA1_175350	NW_004457702.1	934993	937252	R	ACA1_175350	complement(join(<934993..935112,935283..935399,935505..935647,935773..>937252))	Acanthamoeba castellanii str. Neff	14925892
ACA1_175360	mRNA	ACA1_175360	NW_004457702.1	937541	939352	R	ACA1_175360	complement(<937541..>939352)	Acanthamoeba castellanii str. Neff	14925893
ACA1_175370	mRNA	ACA1_175370	NW_004457702.1	939961	940821	R	ACA1_175370	complement(join(<939961..940048,940117..940214,940280..940423,940502..940606,940699..>940821))	Acanthamoeba castellanii str. Neff	14925894
ACA1_175380	mRNA	ACA1_175380	NW_004457702.1	941199	943535	R	ACA1_175380	complement(join(<941199..941249,941314..941382,941499..941666,941773..941864,941946..942048,942275..942411,942481..942718,942820..942964,943128..943216,943317..943360,943436..>943535))	Acanthamoeba castellanii str. Neff	14925895
ACA1_175390	mRNA	ACA1_175390	NW_004457702.1	944341	944651	D	ACA1_175390	join(<944341..944517,944529..>944651)	Acanthamoeba castellanii str. Neff	14925896
ACA1_175400	mRNA	ACA1_175400	NW_004457702.1	944734	947702	R	ACA1_175400	complement(join(<944734..944856,944957..945106,945117..945408,945522..945615,945864..945976,946108..946138,946257..946311,946399..946487,946598..946664,946771..946871,946963..947103,947415..947601,947679..>947702))	Acanthamoeba castellanii str. Neff	14925897
ACA1_175410	mRNA	ACA1_175410	NW_004457702.1	947834	950129	R	ACA1_175410	complement(join(<947834..947995,948071..948234,948357..948588,948609..948668,948753..948890,948980..949238,949312..949459,949563..949880,949964..>950129))	Acanthamoeba castellanii str. Neff	14925898
ACA1_175420	mRNA	ACA1_175420	NW_004457702.1	950346	952322	D	ACA1_175420	join(<950346..950453,950570..950678,950793..950929,951145..951239,951333..951379,951466..>952322)	Acanthamoeba castellanii str. Neff	14925899
ACA1_175430	mRNA	ACA1_175430	NW_004457702.1	952799	953213	D	ACA1_175430	join(<952799..952908,953006..>953213)	Acanthamoeba castellanii str. Neff	14925900
ACA1_175440	mRNA	ACA1_175440	NW_004457702.1	953435	955028	R	ACA1_175440	complement(join(<953435..953644,953728..953791,953874..953959,954045..954336,954401..954636,954715..954846,954924..>955028))	Acanthamoeba castellanii str. Neff	14925901
ACA1_175450	mRNA	ACA1_175450	NW_004457702.1	955851	961566	D	ACA1_175450	join(<955851..956192,956281..956344,956520..956579,956666..956796,956892..957155,957243..957362,957480..957658,957769..957890,958048..958151,958227..958359,958442..958584,958692..958815,958932..959065,959134..959415,959522..959724,959838..960336,960451..961420,961514..>961566)	Acanthamoeba castellanii str. Neff	14925902
ACA1_175460	mRNA	ACA1_175460	NW_004457702.1	961751	964600	R	ACA1_175460	complement(join(<961751..961909,962143..962192,962319..962406,962513..964122,964195..964317,964395..964477,964536..>964600))	Acanthamoeba castellanii str. Neff	14925903
ACA1_175470	mRNA	ACA1_175470	NW_004457702.1	964768	966641	R	ACA1_175470	complement(join(<964768..964863,964933..965023,965087..965168,965213..965289,965367..965442,965544..965619,965723..965837,965905..965995,966099..966160,966236..966321,966381..966455,966549..>966641))	Acanthamoeba castellanii str. Neff	14925904
ACA1_175480	mRNA	ACA1_175480	NW_004457702.1	966859	968594	R	ACA1_175480	complement(join(<966859..966948,967027..967132,967223..967302,967380..967451,967559..967654,967754..967852,967932..968007,968098..968171,968269..968406,968490..>968594))	Acanthamoeba castellanii str. Neff	14925905
ACA1_175490	mRNA	ACA1_175490	NW_004457702.1	968813	971470	R	ACA1_175490	complement(join(<968813..969748,969831..970190,970286..970354,970434..970681,971017..>971470))	Acanthamoeba castellanii str. Neff	14925906
ACA1_175500	mRNA	ACA1_175500	NW_004457702.1	971622	972594	D	ACA1_175500	join(<971622..971749,971967..>972594)	Acanthamoeba castellanii str. Neff	14925907
ACA1_175510	mRNA	ACA1_175510	NW_004457702.1	972751	974981	D	ACA1_175510	join(<972751..972796,972991..973153,973245..973424,973514..973602,973688..973863,973951..974008,974098..974171,974270..974342,974434..974652,974746..>974981)	Acanthamoeba castellanii str. Neff	14925908
ACA1_175520	mRNA	ACA1_175520	NW_004457702.1	975117	984676	R	ACA1_175520	complement(join(<975117..975242,975341..976954,977079..977129,977209..982068,982167..982226,982288..983671,983753..983853,983977..984104,984176..984256,984335..984440,984548..>984676))	Acanthamoeba castellanii str. Neff	14925909
ACA1_175530	mRNA	ACA1_175530	NW_004457702.1	985020	987210	D	ACA1_175530	join(<985020..985093,985181..985265,985350..985405,985490..985583,985660..985768,985846..985916,985985..986050,986137..986271,986355..986448,986563..986680,986780..986908,987013..987053,987137..>987210)	Acanthamoeba castellanii str. Neff	14925910
ACA1_175540	mRNA	ACA1_175540	NW_004457702.1	987503	989119	D	ACA1_175540	join(<987503..988774,988790..>989119)	Acanthamoeba castellanii str. Neff	14925911
ACA1_175550	mRNA	ACA1_175550	NW_004457702.1	989211	995009	D	ACA1_175550	join(<989211..989378,989444..989512,989590..989685,989768..989869,989964..990085,990182..990341,990482..990788,990880..990982,991078..991667,991799..991926,992018..992088,992154..992284,992354..992678,992756..992901,992974..993062,993157..993424,993527..993600,993681..993798,993907..994091,994170..994316,994420..994657,994771..994867,994946..>995009)	Acanthamoeba castellanii str. Neff	14925912
ACA1_175560	mRNA	ACA1_175560	NW_004457702.1	995070	997521	R	ACA1_175560	complement(join(<995070..995321,995413..995660,995773..995921,996021..996255,996346..996616,996737..996921,997010..997100,997209..997300,997413..>997521))	Acanthamoeba castellanii str. Neff	14925913
ACA1_175570	mRNA	ACA1_175570	NW_004457702.1	997784	1002782	R	ACA1_175570	complement(join(<997784..997818,997934..998021,998121..998291,998504..998587,998682..998741,998830..998928,999027..999140,999246..999335,999509..999586,999704..999799,999903..1000054,1000172..1000302,1000381..1000430,1000539..1000754,1000857..1001126,1001202..>1002782))	Acanthamoeba castellanii str. Neff	14925914
ACA1_175580	mRNA	ACA1_175580	NW_004457702.1	1003548	1006983	D	ACA1_175580	join(<1003548..1003677,1003771..1004357,1004453..1004578,1004716..1005893,1005991..1006789,1006870..>1006983)	Acanthamoeba castellanii str. Neff	14925915
ACA1_175590	mRNA	ACA1_175590	NW_004457702.1	1007289	1010419	D	ACA1_175590	join(<1007289..1007436,1007558..1007769,1007923..1007988,1008173..1008248,1008395..1008474,1008658..1008768,1008892..1009061,1009191..1009263,1009407..1009517,1009647..1009855,1009971..1010138,1010230..>1010419)	Acanthamoeba castellanii str. Neff	14925916
ACA1_175600	mRNA	ACA1_175600	NW_004457702.1	1011872	1013870	R	ACA1_175600	complement(join(<1011872..1012191,1012343..1012550,1012644..1012757,1012868..1013053,1013131..1013285,1013366..1013624,1013787..>1013870))	Acanthamoeba castellanii str. Neff	14925917
ACA1_175610	mRNA	ACA1_175610	NW_004457702.1	1014428	1020996	R	ACA1_175610	complement(join(<1014428..1014622,1014682..1014819,1014926..1015074,1015165..1015305,1015406..1015627,1015729..1015825,1015908..1016084,1016186..1016244,1016355..1016571,1016688..1016829,1016922..1017061,1017157..1017234,1017318..1017455,1017573..1017734,1017864..1017966,1018038..1018153,1018241..1018398,1018499..1018619,1018743..1018850,1018992..1019183,1019299..1019399,1019664..1019752,1019845..1019927,1020080..1020256,1020437..1020608,1020751..1020901,1020990..>1020996))	Acanthamoeba castellanii str. Neff	14925918
ACA1_175620	mRNA	ACA1_175620	NW_004457702.1	1021454	1024898	D	ACA1_175620	join(<1021454..1022123,1022199..1022320,1022388..1022489,1022574..1023209,1023282..1023536,1023615..1024046,1024119..1024490,1024567..1024689,1024767..>1024898)	Acanthamoeba castellanii str. Neff	14925919
ACA1_175630	mRNA	ACA1_175630	NW_004457702.1	1025585	1026610	D	ACA1_175630	<1025585..>1026610	Acanthamoeba castellanii str. Neff	14925920
ACA1_175640	mRNA	ACA1_175640	NW_004457702.1	1026705	1028236	R	ACA1_175640	complement(join(<1026705..1026983,1027063..1027194,1027256..1027390,1027452..1027601,1027690..1027802,1027856..1028009,1028084..>1028236))	Acanthamoeba castellanii str. Neff	14925921
ACA1_175650	mRNA	ACA1_175650	NW_004457702.1	1028488	1030133	D	ACA1_175650	join(<1028488..1028604,1028627..1028643,1028730..1029182,1029273..1029580,1029814..>1030133)	Acanthamoeba castellanii str. Neff	14925922
ACA1_175660	mRNA	ACA1_175660	NW_004457702.1	1030780	1032347	D	ACA1_175660	join(<1030780..1031688,1031806..1032123,1032216..>1032347)	Acanthamoeba castellanii str. Neff	14925923
ACA1_175670	mRNA	ACA1_175670	NW_004457702.1	1032420	1032710	D	ACA1_175670	<1032420..>1032710	Acanthamoeba castellanii str. Neff	14925924
ACA1_175690	mRNA	ACA1_175690	NW_004457702.1	1036352	1036925	D	ACA1_175690	join(<1036352..1036435,1036545..>1036925)	Acanthamoeba castellanii str. Neff	14925926
ACA1_175700	mRNA	ACA1_175700	NW_004457702.1	1037194	1040041	R	ACA1_175700	complement(join(<1037194..1037382,1037467..1037598,1037700..1037761,1037968..1038084,1038177..1038331,1038401..1038479,1038551..1038789,1038869..1039094,1039193..1039402,1039454..1039598,1039762..1039830,1039949..>1040041))	Acanthamoeba castellanii str. Neff	14925927
ACA1_175710	mRNA	ACA1_175710	NW_004457702.1	1040425	1042785	R	ACA1_175710	complement(join(<1040425..1040643,1040728..1040848,1040892..1041018,1041097..1041187,1041286..1041347,1041416..1041567,1041631..1041709,1041808..1042046,1042137..1042539,1042623..>1042785))	Acanthamoeba castellanii str. Neff	14925928
ACA1_175720	mRNA	ACA1_175720	NW_004457702.1	1043333	1045369	R	ACA1_175720	complement(join(<1043333..1043371,1043459..1043569,1043679..1043815,1044029..1044098,1044170..1044234,1044303..1044735,1044818..>1045369))	Acanthamoeba castellanii str. Neff	14925929
ACA1_175730	mRNA	ACA1_175730	NW_004457702.1	1046454	1046775	R	ACA1_175730	complement(join(<1046454..1046587,1046610..>1046775))	Acanthamoeba castellanii str. Neff	14925930
ACA1_175740	mRNA	ACA1_175740	NW_004457702.1	1047595	1049615	D	ACA1_175740	join(<1047595..1047634,1047698..1047798,1047889..1047962,1048090..1048618,1048697..1048797,1048881..1048959,1049032..1049147,1049219..1049350,1049438..>1049615)	Acanthamoeba castellanii str. Neff	14925931
ACA1_175760	mRNA	ACA1_175760	NW_004457702.1	1053244	1054261	R	ACA1_175760	complement(join(<1053244..1053427,1053545..1053649,1053723..1053836,1053906..>1054261))	Acanthamoeba castellanii str. Neff	14925933
ACA1_175770	mRNA	ACA1_175770	NW_004457702.1	1055098	1055523	D	ACA1_175770	<1055098..>1055523	Acanthamoeba castellanii str. Neff	14925934
ACA1_175780	mRNA	ACA1_175780	NW_004457702.1	1055728	1057167	R	ACA1_175780	complement(join(<1055728..1055787,1055871..1055995,1056087..1056184,1056291..1056389,1056462..1056519,1056611..1056626,1056722..1056804,1056876..1056915,1056967..>1057167))	Acanthamoeba castellanii str. Neff	14925935
ACA1_175790	mRNA	ACA1_175790	NW_004457702.1	1057554	1058469	D	ACA1_175790	join(<1057554..1057944,1058021..1058160,1058272..>1058469)	Acanthamoeba castellanii str. Neff	14925936
ACA1_175800	mRNA	ACA1_175800	NW_004457702.1	1058851	1061934	R	ACA1_175800	complement(join(<1058851..1058869,1058897..1059062,1059173..1059238,1059341..1059497,1059604..1059756,1059843..1060013,1060096..1060208,1060309..1060394,1060480..1060855,1060925..1061305,1061495..1061599,1061689..1061776,1061911..>1061934))	Acanthamoeba castellanii str. Neff	14925937
ACA1_175810	mRNA	ACA1_175810	NW_004457702.1	1062903	1066778	D	ACA1_175810	join(<1062903..1063085,1063168..1063288,1063507..1063571,1063669..1065154,1065277..1065413,1065512..1065629,1065724..1065989,1066128..1066315,1066438..1066650,1066739..>1066778)	Acanthamoeba castellanii str. Neff	14925938
ACA1_175820	mRNA	ACA1_175820	NW_004457702.1	1067355	1069300	R	ACA1_175820	complement(join(<1067355..1068389,1068495..1068728,1068848..>1069300))	Acanthamoeba castellanii str. Neff	14925939
ACA1_175830	mRNA	ACA1_175830	NW_004457702.1	1070304	1071119	R	ACA1_175830	complement(join(<1070304..1070321,1070461..1070586,1070646..1070733,1070818..1070881,1070966..>1071119))	Acanthamoeba castellanii str. Neff	14925940
ACA1_175840	mRNA	ACA1_175840	NW_004457702.1	1071267	1072344	R	ACA1_175840	complement(join(<1071267..1071351,1071444..1071502,1071569..1071686,1071751..1071830,1071902..1071955,1072056..1072155,1072220..>1072344))	Acanthamoeba castellanii str. Neff	14925941
ACA1_175850	mRNA	ACA1_175850	NW_004457702.1	1072786	1074150	R	ACA1_175850	complement(join(<1072786..1072997,1073085..1073278,1073382..1073545,1073731..>1074150))	Acanthamoeba castellanii str. Neff	14925942
ACA1_175860	mRNA	ACA1_175860	NW_004457702.1	1074349	1078306	R	ACA1_175860	complement(join(<1074349..1075058,1075144..1075205,1075344..1075560,1075640..1075849,1075929..1076048,1076186..1076262,1076341..1076452,1076566..1076817,1076910..1077008,1077091..1077326,1077408..1077628,1077718..1077782,1077910..>1078306))	Acanthamoeba castellanii str. Neff	14925943
ACA1_175870	mRNA	ACA1_175870	NW_004457702.1	1078688	1081010	R	ACA1_175870	complement(join(<1078688..1078813,1078895..1079805,1079896..1079976,1080059..1080203,1080318..1080567,1080667..1080714,1080850..>1081010))	Acanthamoeba castellanii str. Neff	14925944
ACA1_175880	mRNA	ACA1_175880	NW_004457702.1	1082070	1082384	D	ACA1_175880	<1082070..>1082384	Acanthamoeba castellanii str. Neff	14925945
ACA1_175890	mRNA	ACA1_175890	NW_004457702.1	1082469	1083294	R	ACA1_175890	complement(join(<1082469..1082869,1082940..1083135,1083205..>1083294))	Acanthamoeba castellanii str. Neff	14925946
ACA1_175900	mRNA	ACA1_175900	NW_004457702.1	1083487	1084658	D	ACA1_175900	join(<1083487..1083656,1083785..1083935,1084020..1084108,1084203..1084374,1084458..>1084658)	Acanthamoeba castellanii str. Neff	14925947
ACA1_175910	mRNA	ACA1_175910	NW_004457702.1	1085170	1087177	D	ACA1_175910	join(<1085170..1085299,1085379..1085524,1085615..1085824,1085931..1086329,1086441..1086924,1087017..>1087177)	Acanthamoeba castellanii str. Neff	14925948
ACA1_175920	mRNA	ACA1_175920	NW_004457702.1	1087319	1088805	D	ACA1_175920	join(<1087319..1087403,1087628..1087692,1087711..1087786,1088116..1088201,1088293..>1088805)	Acanthamoeba castellanii str. Neff	14925949
ACA1_175930	mRNA	ACA1_175930	NW_004457702.1	1089072	1089879	D	ACA1_175930	join(<1089072..1089342,1089419..>1089879)	Acanthamoeba castellanii str. Neff	14925950
ACA1_175940	mRNA	ACA1_175940	NW_004457702.1	1090661	1093516	R	ACA1_175940	complement(join(<1090661..1090831,1090905..1090973,1091084..1091147,1091508..1091605,1091689..1092561,1092740..1093168,1093379..>1093516))	Acanthamoeba castellanii str. Neff	14925951
ACA1_175960	mRNA	ACA1_175960	NW_004457702.1	1095570	1095935	R	ACA1_175960	complement(<1095570..>1095935)	Acanthamoeba castellanii str. Neff	14925953
ACA1_175970	mRNA	ACA1_175970	NW_004457702.1	1096108	1097247	R	ACA1_175970	complement(join(<1096108..1096454,1096542..1096889,1097082..>1097247))	Acanthamoeba castellanii str. Neff	14925954
ACA1_175980	mRNA	ACA1_175980	NW_004457702.1	1097339	1098308	D	ACA1_175980	join(<1097339..1097437,1097528..1097616,1097731..1097915,1097985..1098106,1098207..>1098308)	Acanthamoeba castellanii str. Neff	14925955
ACA1_175990	mRNA	ACA1_175990	NW_004457702.1	1098859	1100109	D	ACA1_175990	join(<1098859..1099722,1099792..>1100109)	Acanthamoeba castellanii str. Neff	14925956
ACA1_176000	mRNA	ACA1_176000	NW_004457702.1	1100297	1101865	R	ACA1_176000	complement(join(<1100297..1100444,1100516..1100598,1100685..1100812,1100905..1100934,1101115..1101194,1101274..1101419,1101463..1101582,1101667..1101789,1101836..>1101865))	Acanthamoeba castellanii str. Neff	14925957
ACA1_176010	mRNA	ACA1_176010	NW_004457702.1	1102001	1105074	R	ACA1_176010	complement(join(<1102001..1102161,1102266..1102794,1102925..1103257,1103461..1103676,1103745..1103789,1103805..1103905,1103986..1104115,1104192..1104426,1104508..1104630,1104697..1104842,1104904..>1105074))	Acanthamoeba castellanii str. Neff	14925958
ACA1_176020	mRNA	ACA1_176020	NW_004457702.1	1105607	1107269	R	ACA1_176020	complement(join(<1105607..1105623,1105782..1105944,1106100..1106196,1106293..1106492,1106579..1106669,1106744..1106866,1106960..1107072,1107111..>1107269))	Acanthamoeba castellanii str. Neff	14925959
ACA1_176030	mRNA	ACA1_176030	NW_004457702.1	1107631	1111052	R	ACA1_176030	complement(join(<1107631..1107735,1107830..1107919,1107993..1108094,1108184..1108255,1108333..1108424,1108511..1108694,1108789..1108914,1108998..1109151,1109223..1109438,1109562..1109725,1109810..1110009,1110076..1110484,1110553..1110789,1110906..>1111052))	Acanthamoeba castellanii str. Neff	14925960
ACA1_176040	mRNA	ACA1_176040	NW_004457702.1	1111745	1112710	D	ACA1_176040	join(<1111745..1111849,1111934..1112167,1112258..>1112710)	Acanthamoeba castellanii str. Neff	14925961
ACA1_176050	mRNA	ACA1_176050	NW_004457702.1	1112924	1115495	R	ACA1_176050	complement(join(<1112924..1113531,1113599..1113757,1113832..1114002,1114064..1114231,1114293..1114548,1114578..1114765,1114776..1115030,1115111..>1115495))	Acanthamoeba castellanii str. Neff	14925962
ACA1_176060	mRNA	ACA1_176060	NW_004457702.1	1115659	1118579	D	ACA1_176060	join(<1115659..1116148,1116435..1116541,1116623..1116941,1117029..1117130,1117250..1117393,1117481..1117535,1117606..1118135,1118226..1118330,1118413..>1118579)	Acanthamoeba castellanii str. Neff	14925963
ACA1_176070	mRNA	ACA1_176070	NW_004457702.1	1118673	1120209	D	ACA1_176070	join(<1118673..1118796,1118874..1119068,1119136..1119204,1119307..1119936,1120055..>1120209)	Acanthamoeba castellanii str. Neff	14925964
ACA1_176080	mRNA	ACA1_176080	NW_004457702.1	1120405	1123001	D	ACA1_176080	join(<1120405..1120458,1120492..1120597,1120670..1120873,1120967..1121120,1121202..1121425,1121505..1121598,1121658..1121808,1121894..1122029,1122122..1122348,1122366..>1123001)	Acanthamoeba castellanii str. Neff	14925965
ACA1_176090	mRNA	ACA1_176090	NW_004457702.1	1123091	1125027	R	ACA1_176090	complement(join(<1123091..1123343,1123420..1123704,1123792..1123892,1124033..1124218,1124361..1124656,1124841..>1125027))	Acanthamoeba castellanii str. Neff	14925966
ACA1_176100	mRNA	ACA1_176100	NW_004457702.1	1125308	1125820	R	ACA1_176100	complement(join(<1125308..1125571,1125644..>1125820))	Acanthamoeba castellanii str. Neff	14925967
ACA1_176110	mRNA	ACA1_176110	NW_004457702.1	1126161	1126689	R	ACA1_176110	complement(join(<1126161..1126337,1126399..>1126689))	Acanthamoeba castellanii str. Neff	14925968
ACA1_176120	mRNA	ACA1_176120	NW_004457702.1	1126913	1127665	D	ACA1_176120	join(<1126913..1127027,1127093..1127266,1127348..1127485,1127553..>1127665)	Acanthamoeba castellanii str. Neff	14925969
ACA1_176130	mRNA	ACA1_176130	NW_004457702.1	1127897	1131013	D	ACA1_176130	join(<1127897..1128368,1128506..1128689,1128787..1128869,1128941..1129033,1129397..1129561,1129657..1129839,1129916..1130007,1130095..1130452,1130600..1130679,1130840..>1131013)	Acanthamoeba castellanii str. Neff	14925970
ACA1_176140	mRNA	ACA1_176140	NW_004457702.1	1131177	1132872	D	ACA1_176140	join(<1131177..1131218,1131314..1131400,1131523..1131684,1131771..1132000,1132126..1132483,1132576..>1132872)	Acanthamoeba castellanii str. Neff	14925971
ACA1_176150	mRNA	ACA1_176150	NW_004457702.1	1133017	1135220	D	ACA1_176150	join(<1133017..1133033,1133124..1133272,1133396..1133493,1133618..1133755,1133897..1134027,1134114..1134227,1134303..1134379,1134460..1134623,1134761..1134872,1134956..1135023,1135116..>1135220)	Acanthamoeba castellanii str. Neff	14925972
ACA1_176160	mRNA	ACA1_176160	NW_004457702.1	1135360	1137457	R	ACA1_176160	complement(join(<1135360..1135558,1135673..1135782,1135874..1135985,1136074..1136209,1136286..1136411,1136499..1136593,1136666..1136804,1137032..1137106,1137427..>1137457))	Acanthamoeba castellanii str. Neff	14925973
ACA1_176170	mRNA	ACA1_176170	NW_004457702.1	1138105	1139858	D	ACA1_176170	join(<1138105..1138330,1138408..1138585,1138708..1138823,1138893..1139229,1139312..1139400,1139518..>1139858)	Acanthamoeba castellanii str. Neff	14925974
ACA1_176180	mRNA	ACA1_176180	NW_004457702.1	1140506	1142333	D	ACA1_176180	join(<1140506..1140615,1140689..1140797,1140886..1141959,1142037..>1142333)	Acanthamoeba castellanii str. Neff	14925975
ACA1_176190	mRNA	ACA1_176190	NW_004457702.1	1142757	1143179	D	ACA1_176190	join(<1142757..1142843,1142914..1143010,1143097..>1143179)	Acanthamoeba castellanii str. Neff	14925976
ACA1_176300	mRNA	ACA1_176300	NW_004457702.1	1149948	1150473	D	ACA1_176300	join(<1149948..1150032,1150115..>1150473)	Acanthamoeba castellanii str. Neff	14925977
ACA1_176410	mRNA	ACA1_176410	NW_004457702.1	1154928	1155322	D	ACA1_176410	join(<1154928..1155008,1155027..1155162,1155276..>1155322)	Acanthamoeba castellanii str. Neff	14925978
ACA1_302290	mRNA	ACA1_302290	NW_004457701.1	194	544	R	ACA1_302290	complement(join(<194..226,368..>544))	Acanthamoeba castellanii str. Neff	14925553
ACA1_302400	mRNA	ACA1_302400	NW_004457701.1	1727	3536	R	ACA1_302400	complement(join(<1727..1877,1953..2176,2302..2414,2545..2671,2784..2912,3003..3177,3268..3369,3441..>3536))	Acanthamoeba castellanii str. Neff	14925554
ACA1_326070	mRNA	ACA1_326070	NW_004457700.1	12823	15733	D	ACA1_326070	join(<12823..12894,13050..13184,13266..13346,13524..14054,14161..14359,14440..14499,14580..14711,14778..14836,14952..15034,15149..15239,15370..15456,15578..>15733)	Acanthamoeba castellanii str. Neff	14925552
ACA1_326080	mRNA	ACA1_326080	NW_004457700.1	16353	17954	D	ACA1_326080	join(<16353..16480,16565..16673,16791..16888,16976..17138,17249..17405,17485..>17954)	Acanthamoeba castellanii str. Neff	14925540
ACA1_326090	mRNA	ACA1_326090	NW_004457700.1	18085	20254	R	ACA1_326090	complement(join(<18085..18335,18444..18651,18765..18824,18915..18968,19211..19352,19455..19588,19713..19808,19934..>20254))	Acanthamoeba castellanii str. Neff	14925532
ACA1_326110	mRNA	ACA1_326110	NW_004457700.1	25077	26237	D	ACA1_326110	<25077..>26237	Acanthamoeba castellanii str. Neff	14925534
ACA1_326120	mRNA	ACA1_326120	NW_004457700.1	27347	30401	D	ACA1_326120	join(<27347..27680,27762..27883,27996..28153,28272..28384,28486..28884,28971..29102,29209..29289,29447..29514,29638..29745,29834..29977,30078..>30401)	Acanthamoeba castellanii str. Neff	14925535
ACA1_326130	mRNA	ACA1_326130	NW_004457700.1	31160	32045	D	ACA1_326130	join(<31160..31192,31281..31377,31472..31599,31709..31815,31919..>32045)	Acanthamoeba castellanii str. Neff	14925536
ACA1_326140	mRNA	ACA1_326140	NW_004457700.1	32804	33223	D	ACA1_326140	<32804..>33223	Acanthamoeba castellanii str. Neff	14925537
ACA1_326150	mRNA	ACA1_326150	NW_004457700.1	33758	38642	D	ACA1_326150	join(<33758..33853,34092..34191,34427..34538,34649..34803,34888..34986,35103..35185,35383..35445,35590..35669,35772..35830,35954..36200,36290..36618,36689..36979,37052..37147,37219..37268,37375..37445,37527..37650,37758..37864,37944..38061,38173..38308,38379..38493,38576..>38642)	Acanthamoeba castellanii str. Neff	14925538
ACA1_326160	mRNA	ACA1_326160	NW_004457700.1	40720	42130	R	ACA1_326160	complement(join(<40720..41253,41369..41428,41522..>42130))	Acanthamoeba castellanii str. Neff	14925539
ACA1_326170	mRNA	ACA1_326170	NW_004457700.1	43724	47268	D	ACA1_326170	join(<43724..43805,43968..44138,44382..44456,44598..44750,44855..44925,45117..45178,45257..45432,45569..45661,45875..45990,46148..46208,46290..46457,46582..46666,46779..>47268)	Acanthamoeba castellanii str. Neff	14925541
ACA1_326180	mRNA	ACA1_326180	NW_004457700.1	48186	48833	D	ACA1_326180	join(<48186..48264,48354..48523,48627..>48833)	Acanthamoeba castellanii str. Neff	14925542
ACA1_326190	mRNA	ACA1_326190	NW_004457700.1	49364	50783	D	ACA1_326190	join(<49364..49484,49611..49979,50065..50397,50503..>50783)	Acanthamoeba castellanii str. Neff	14925543
ACA1_326200	mRNA	ACA1_326200	NW_004457700.1	50926	52435	R	ACA1_326200	complement(join(<50926..51087,51181..51284,51363..51439,51564..51701,51878..51987,52175..>52435))	Acanthamoeba castellanii str. Neff	14925544
ACA1_326210	mRNA	ACA1_326210	NW_004457700.1	52803	53498	R	ACA1_326210	complement(join(<52803..52880,52893..53245,53333..>53498))	Acanthamoeba castellanii str. Neff	14925545
ACA1_326220	mRNA	ACA1_326220	NW_004457700.1	53536	55590	R	ACA1_326220	complement(join(<53536..54122,54195..54449,54537..54624,54742..54892,55002..55090,55151..55286,55418..>55590))	Acanthamoeba castellanii str. Neff	14925546
ACA1_326230	mRNA	ACA1_326230	NW_004457700.1	55801	58955	D	ACA1_326230	join(<55801..55852,56092..56255,56384..56462,56546..56609,56712..56854,56982..57119,57240..57768,57877..57966,58102..58287,58480..58667,58861..>58955)	Acanthamoeba castellanii str. Neff	14925547
ACA1_326240	mRNA	ACA1_326240	NW_004457700.1	60761	63693	R	ACA1_326240	complement(join(<60761..60973,61040..61449,61538..61631,61723..61846,61967..62153,62243..62394,62535..62854,62972..63027,63139..63413,63578..>63693))	Acanthamoeba castellanii str. Neff	14925548
ACA1_326250	mRNA	ACA1_326250	NW_004457700.1	63814	65872	R	ACA1_326250	complement(join(<63814..63876,63935..64020,64133..64324,64403..64465,64554..64693,64797..64903,65010..65072,65150..65230,65336..65379,65465..65528,65598..65681,65756..>65872))	Acanthamoeba castellanii str. Neff	14925549
ACA1_326260	mRNA	ACA1_326260	NW_004457700.1	66189	67011	D	ACA1_326260	join(<66189..66329,66419..66496,66576..66747,66815..>67011)	Acanthamoeba castellanii str. Neff	14925550
ACA1_326270	mRNA	ACA1_326270	NW_004457700.1	67148	67843	R	ACA1_326270	complement(join(<67148..67567,67628..>67843))	Acanthamoeba castellanii str. Neff	14925551
ACA1_105360	mRNA	ACA1_105360	NW_004457739.1	991	2686	R	ACA1_105360	complement(join(<991..1126,1142..1196,1301..1432,1506..1665,1690..1769,2090..2339,2414..>2686))	Acanthamoeba castellanii str. Neff	14926831
ACA1_105370	mRNA	ACA1_105370	NW_004457739.1	3038	3694	R	ACA1_105370	complement(join(<3038..3564,3580..>3694))	Acanthamoeba castellanii str. Neff	14926832
ACA1_105480	mRNA	ACA1_105480	NW_004457739.1	4927	5455	R	ACA1_105480	complement(join(<4927..4965,4985..>5455))	Acanthamoeba castellanii str. Neff	14926828
ACA1_105490	mRNA	ACA1_105490	NW_004457739.1	5580	6774	R	ACA1_105490	complement(join(<5580..5672,5760..5826,5895..5985,6055..6184,6255..6386,6458..6591,6693..>6774))	Acanthamoeba castellanii str. Neff	14926829
ACA1_105500	mRNA	ACA1_105500	NW_004457739.1	6960	7350	D	ACA1_105500	join(<6960..6984,7044..7152,7227..>7350)	Acanthamoeba castellanii str. Neff	14926830
ACA1_105510	mRNA	ACA1_105510	NW_004457739.1	8246	8779	R	ACA1_105510	complement(<8246..>8779)	Acanthamoeba castellanii str. Neff	14926825
ACA1_105620	mRNA	ACA1_105620	NW_004457739.1	10885	13116	R	ACA1_105620	complement(join(<10885..11116,11222..11314,11396..11556,11678..11783,11887..11958,12060..12160,12230..12305,12449..12527,12624..12720,12799..12870,12976..>13116))	Acanthamoeba castellanii str. Neff	14926826
ACA1_105630	mRNA	ACA1_105630	NW_004457739.1	13944	15081	R	ACA1_105630	complement(join(<13944..13975,14094..14364,14458..14555,14638..14724,14802..>15081))	Acanthamoeba castellanii str. Neff	14926827
ACA1_322330	mRNA	ACA1_322330	NW_004457699.1	2819	3124	D	ACA1_322330	join(<2819..2921,2985..>3124)	Acanthamoeba castellanii str. Neff	14925531
ACA1_322340	mRNA	ACA1_322340	NW_004457699.1	4296	5030	D	ACA1_322340	join(<4296..4505,4527..>5030)	Acanthamoeba castellanii str. Neff	14925523
ACA1_322350	mRNA	ACA1_322350	NW_004457699.1	6714	7292	R	ACA1_322350	complement(join(<6714..6989,7149..>7292))	Acanthamoeba castellanii str. Neff	14925524
ACA1_322360	mRNA	ACA1_322360	NW_004457699.1	7373	7753	R	ACA1_322360	complement(join(<7373..7543,7601..>7753))	Acanthamoeba castellanii str. Neff	14925525
ACA1_322370	mRNA	ACA1_322370	NW_004457699.1	8655	9709	D	ACA1_322370	join(<8655..9066,9126..>9709)	Acanthamoeba castellanii str. Neff	14925526
ACA1_322380	mRNA	ACA1_322380	NW_004457699.1	10439	12133	R	ACA1_322380	complement(join(<10439..10543,10620..10736,10817..11695,11774..>12133))	Acanthamoeba castellanii str. Neff	14925527
ACA1_322390	mRNA	ACA1_322390	NW_004457699.1	12943	18499	D	ACA1_322390	join(<12943..13116,13282..13422,13579..13649,13751..13841,13934..13986,14097..14205,14336..14987,15100..15287,15391..15682,15810..15901,16070..16181,16282..16424,16545..16598,16721..17145,17240..17524,17595..17741,17839..17898,17986..>18499)	Acanthamoeba castellanii str. Neff	14925522
ACA1_322400	mRNA	ACA1_322400	NW_004457699.1	18448	20137	R	ACA1_322400	complement(join(<18448..18456,18722..18900,19009..19292,19386..19446,19600..19772,19995..20064,20119..>20137))	Acanthamoeba castellanii str. Neff	14925528
ACA1_322410	mRNA	ACA1_322410	NW_004457699.1	20331	21899	R	ACA1_322410	complement(join(<20331..20431,20590..20634,20782..20876,20992..21150,21307..21431,21515..21577,21689..21752,21844..>21899))	Acanthamoeba castellanii str. Neff	14925529
ACA1_322420	mRNA	ACA1_322420	NW_004457699.1	22147	23989	R	ACA1_322420	complement(join(<22147..22494,22593..22720,22834..22945,23119..23207,23302..23359,23431..23517,23590..23733,23816..23856,23956..>23989))	Acanthamoeba castellanii str. Neff	14925530
ACA1_032430	mRNA	ACA1_032430	NW_004457698.1	102	10498	D	ACA1_032430	join(<102..261,372..487,655..783,856..1092,1187..1293,1384..1510,1607..1821,1866..1997,5199..5281,5362..5562,5630..5824,5896..5998,6376..6535,6602..7448,7528..7649,7732..8053,8170..8715,9553..9587,9697..10454,10483..>10498)	Acanthamoeba castellanii str. Neff	14925520
ACA1_032840	mRNA	ACA1_032840	NW_004457698.1	11010	14992	D	ACA1_032840	join(<11010..11420,11521..11769,13435..13625,13698..13938,14384..14490,14585..14767,14848..>14992)	Acanthamoeba castellanii str. Neff	14925521
ACA1_005830	mRNA	ACA1_005830	NW_004457697.1	13621	15483	R	ACA1_005830	complement(join(<13621..13761,13866..14007,14090..14242,14320..14443,14541..14689,14782..14917,15045..>15483))	Acanthamoeba castellanii str. Neff	14925519
ACA1_006060	mRNA	ACA1_006060	NW_004457697.1	25106	26434	D	ACA1_006060	join(<25106..25138,25221..25379,25464..25532,25680..25788,25878..>26434)	Acanthamoeba castellanii str. Neff	14925497
ACA1_006070	mRNA	ACA1_006070	NW_004457697.1	26616	27750	R	ACA1_006070	complement(join(<26616..26941,27087..27227,27307..27402,27522..>27750))	Acanthamoeba castellanii str. Neff	14925498
ACA1_006080	mRNA	ACA1_006080	NW_004457697.1	27918	31283	R	ACA1_006080	complement(join(<27918..28915,29036..29131,29361..29438,29689..29763,29835..29930,30198..30275,30369..30422,30524..30601,30716..30828,30963..31044,31229..>31283))	Acanthamoeba castellanii str. Neff	14925499
ACA1_006100	mRNA	ACA1_006100	NW_004457697.1	40495	42683	D	ACA1_006100	join(<40495..40587,40691..40755,40822..41197,41300..41426,41501..41617,41708..41924,41995..42137,42250..>42683)	Acanthamoeba castellanii str. Neff	14925501
ACA1_006110	mRNA	ACA1_006110	NW_004457697.1	43133	44052	D	ACA1_006110	join(<43133..43274,43521..43654,43759..>44052)	Acanthamoeba castellanii str. Neff	14925502
ACA1_006120	mRNA	ACA1_006120	NW_004457697.1	44346	47667	D	ACA1_006120	join(<44346..45245,45362..45480,45577..45760,45841..46352,46438..46511,46589..46708,46812..46984,47062..>47667)	Acanthamoeba castellanii str. Neff	14925503
ACA1_006130	mRNA	ACA1_006130	NW_004457697.1	48151	56117	D	ACA1_006130	join(<48151..48375,48935..49066,49162..49221,49321..49420,49556..49885,50001..51491,51613..51690,52198..52346,52467..53813,53924..54479,54600..54967,55038..55099,55226..55476,55561..55702,55811..>56117)	Acanthamoeba castellanii str. Neff	14925504
ACA1_006140	mRNA	ACA1_006140	NW_004457697.1	56534	58091	D	ACA1_006140	join(<56534..56849,56923..57134,57200..57415,57524..57725,57823..57892,57986..>58091)	Acanthamoeba castellanii str. Neff	14925505
ACA1_006150	mRNA	ACA1_006150	NW_004457697.1	58292	59664	D	ACA1_006150	join(<58292..58423,58529..58607,58741..58853,58934..59112,59259..59406,59485..>59664)	Acanthamoeba castellanii str. Neff	14925506
ACA1_006160	mRNA	ACA1_006160	NW_004457697.1	59907	60738	D	ACA1_006160	join(<59907..60104,60119..60304,60319..60436,60453..60545,60614..>60738)	Acanthamoeba castellanii str. Neff	14925507
ACA1_006170	mRNA	ACA1_006170	NW_004457697.1	60773	63726	R	ACA1_006170	complement(join(<60773..60831,60926..61048,61161..61464,61575..61688,61798..61852,61935..62117,62237..62305,62584..62654,62750..62858,62976..63049,63179..63269,63406..63482,63667..>63726))	Acanthamoeba castellanii str. Neff	14925508
ACA1_006180	mRNA	ACA1_006180	NW_004457697.1	63997	66322	R	ACA1_006180	complement(join(<63997..64179,64266..64567,64644..64692,64726..64793,64864..64917,64983..65136,65203..65373,65465..65571,65657..65866,65942..66068,66086..>66322))	Acanthamoeba castellanii str. Neff	14925509
ACA1_006190	mRNA	ACA1_006190	NW_004457697.1	67507	67915	R	ACA1_006190	complement(join(<67507..67656,67746..67807,67861..>67915))	Acanthamoeba castellanii str. Neff	14925510
ACA1_006200	mRNA	ACA1_006200	NW_004457697.1	68133	70067	R	ACA1_006200	complement(join(<68133..68138,68236..68348,68437..68588,68654..68776,68818..68953,69041..69118,69194..69352,69432..69521,69728..>70067))	Acanthamoeba castellanii str. Neff	14925511
ACA1_006210	mRNA	ACA1_006210	NW_004457697.1	70454	71014	R	ACA1_006210	complement(<70454..>71014)	Acanthamoeba castellanii str. Neff	14925512
ACA1_006220	mRNA	ACA1_006220	NW_004457697.1	71711	73249	D	ACA1_006220	<71711..>73249	Acanthamoeba castellanii str. Neff	14925513
ACA1_006230	mRNA	ACA1_006230	NW_004457697.1	73350	75288	R	ACA1_006230	complement(join(<73350..73612,73690..73780,73873..73989,74066..74574,74683..74773,74875..74890,74987..>75288))	Acanthamoeba castellanii str. Neff	14925514
ACA1_006240	mRNA	ACA1_006240	NW_004457697.1	75392	76269	D	ACA1_006240	join(<75392..75630,75704..75846,75920..76038,76168..>76269)	Acanthamoeba castellanii str. Neff	14925515
ACA1_006250	mRNA	ACA1_006250	NW_004457697.1	76684	78460	R	ACA1_006250	complement(join(<76684..77820,77879..78079,78150..78180,78258..>78460))	Acanthamoeba castellanii str. Neff	14925516
ACA1_006260	mRNA	ACA1_006260	NW_004457697.1	78871	79429	D	ACA1_006260	join(<78871..79287,79409..>79429)	Acanthamoeba castellanii str. Neff	14925517
ACA1_006270	mRNA	ACA1_006270	NW_004457697.1	79567	82339	R	ACA1_006270	complement(join(<79567..81363,81482..81563,81706..81814,81925..82013,82095..>82339))	Acanthamoeba castellanii str. Neff	14925518
ACA1_345560	mRNA	ACA1_345560	NW_004457696.1	40	1874	D	ACA1_345560	join(<40..696,1267..1515,1647..>1874)	Acanthamoeba castellanii str. Neff	14925493
ACA1_345670	mRNA	ACA1_345670	NW_004457696.1	1955	2810	R	ACA1_345670	complement(join(<1955..2098,2173..2265,2418..>2810))	Acanthamoeba castellanii str. Neff	14925485
ACA1_345680	mRNA	ACA1_345680	NW_004457696.1	3033	8779	D	ACA1_345680	join(<3033..3341,5806..6199,6280..6440,6509..6571,6628..6939,7187..7333,7597..7651,7739..7843,7954..8111,8206..8315,8422..8568,8659..>8779)	Acanthamoeba castellanii str. Neff	14925494
ACA1_345890	mRNA	ACA1_345890	NW_004457696.1	9275	9840	D	ACA1_345890	join(<9275..9496,9614..9720,9816..>9840)	Acanthamoeba castellanii str. Neff	14925486
ACA1_345900	mRNA	ACA1_345900	NW_004457696.1	9919	10360	R	ACA1_345900	complement(join(<9919..10038,10118..>10360))	Acanthamoeba castellanii str. Neff	14925487
ACA1_346010	mRNA	ACA1_346010	NW_004457696.1	12779	13739	R	ACA1_346010	complement(join(<12779..12921,13017..13234,13276..13463,13572..>13739))	Acanthamoeba castellanii str. Neff	14925488
ACA1_346020	mRNA	ACA1_346020	NW_004457696.1	13889	14404	D	ACA1_346020	<13889..>14404	Acanthamoeba castellanii str. Neff	14925489
ACA1_346030	mRNA	ACA1_346030	NW_004457696.1	14493	14978	R	ACA1_346030	complement(<14493..>14978)	Acanthamoeba castellanii str. Neff	14925490
ACA1_346040	mRNA	ACA1_346040	NW_004457696.1	15462	16297	D	ACA1_346040	join(<15462..15654,15793..15872,15927..16138,16222..>16297)	Acanthamoeba castellanii str. Neff	14925491
ACA1_346150	mRNA	ACA1_346150	NW_004457696.1	23443	23990	R	ACA1_346150	complement(join(<23443..23639,23705..23812,23880..>23990))	Acanthamoeba castellanii str. Neff	14925492
ACA1_333040	mRNA	ACA1_333040	NW_004457693.1	181	2759	D	ACA1_333040	join(<181..304,338..423,546..642,735..805,900..973,1063..1157,1216..1376,1471..1600,1684..1724,1807..1932,2061..>2759)	Acanthamoeba castellanii str. Neff	14925484
ACA1_333150	mRNA	ACA1_333150	NW_004457693.1	5691	6297	D	ACA1_333150	join(<5691..5868,5899..6004,6114..>6297)	Acanthamoeba castellanii str. Neff	14925458
ACA1_333160	mRNA	ACA1_333160	NW_004457693.1	8043	8377	D	ACA1_333160	join(<8043..8201,8309..>8377)	Acanthamoeba castellanii str. Neff	14925459
ACA1_333170	mRNA	ACA1_333170	NW_004457693.1	8534	11099	R	ACA1_333170	complement(join(<8534..8569,8729..8769,8903..8970,9025..9038,9150..9242,9406..9495,9595..9655,9715..10245,10367..10463,10556..10713,11026..>11099))	Acanthamoeba castellanii str. Neff	14925460
ACA1_333180	mRNA	ACA1_333180	NW_004457693.1	11364	13544	R	ACA1_333180	complement(join(<11364..11805,11909..12082,12151..12312,12502..12611,12801..12922,13052..13190,13266..>13544))	Acanthamoeba castellanii str. Neff	14925461
ACA1_333190	mRNA	ACA1_333190	NW_004457693.1	13704	14444	D	ACA1_333190	join(<13704..13776,13867..13951,14115..14320,14416..>14444)	Acanthamoeba castellanii str. Neff	14925462
ACA1_333200	mRNA	ACA1_333200	NW_004457693.1	14620	16245	D	ACA1_333200	join(<14620..14683,14761..14863,14929..15011,15101..15219,15296..15377,15464..15961,16151..>16245)	Acanthamoeba castellanii str. Neff	14925463
ACA1_333210	mRNA	ACA1_333210	NW_004457693.1	16482	17721	D	ACA1_333210	join(<16482..16693,16874..16987,17090..17169,17237..17436,17494..>17721)	Acanthamoeba castellanii str. Neff	14925464
ACA1_333220	mRNA	ACA1_333220	NW_004457693.1	17941	23262	D	ACA1_333220	join(<17941..18055,18142..18172,18355..18492,18683..18834,18994..19077,19173..19372,19443..19730,19838..19949,20032..20167,20301..20478,20560..20760,20853..21044,21174..21374,21486..21632,21716..21973,22050..22213,22294..22497,22577..22910,22984..>23262)	Acanthamoeba castellanii str. Neff	14925465
ACA1_333230	mRNA	ACA1_333230	NW_004457693.1	23415	23924	R	ACA1_333230	complement(join(<23415..23483,23611..23705,23765..>23924))	Acanthamoeba castellanii str. Neff	14925466
ACA1_333240	mRNA	ACA1_333240	NW_004457693.1	24134	25309	D	ACA1_333240	join(<24134..24260,24338..24530,24604..24895,24961..25082,25162..>25309)	Acanthamoeba castellanii str. Neff	14925467
ACA1_333250	mRNA	ACA1_333250	NW_004457693.1	25408	25932	R	ACA1_333250	complement(<25408..>25932)	Acanthamoeba castellanii str. Neff	14925468
ACA1_333260	mRNA	ACA1_333260	NW_004457693.1	26146	28509	R	ACA1_333260	complement(join(<26146..26301,26388..26503,26603..26686,26779..26874,26985..27106,27178..27273,27597..27743,27882..27973,28047..28180,28260..>28509))	Acanthamoeba castellanii str. Neff	14925469
ACA1_333270	mRNA	ACA1_333270	NW_004457693.1	28607	29627	R	ACA1_333270	complement(join(<28607..29008,29042..29286,29345..>29627))	Acanthamoeba castellanii str. Neff	14925470
ACA1_333280	mRNA	ACA1_333280	NW_004457693.1	29943	31500	R	ACA1_333280	complement(join(<29943..30055,30250..30427,30572..30735,30828..31086,31177..>31500))	Acanthamoeba castellanii str. Neff	14925471
ACA1_333290	mRNA	ACA1_333290	NW_004457693.1	33343	40191	D	ACA1_333290	join(<33343..33588,33665..33813,33882..34044,34126..34282,34358..34768,34841..34874,34976..35048,35129..35200,35290..35362,35447..35505,35574..35670,35744..35911,35994..36208,36303..36485,36560..36940,37018..37176,37249..37460,37528..37865,37943..38560,38621..38736,38806..38958,39036..39204,39290..39456,39550..39688,39754..39952,40083..>40191)	Acanthamoeba castellanii str. Neff	14925472
ACA1_333300	mRNA	ACA1_333300	NW_004457693.1	40747	41742	D	ACA1_333300	join(<40747..40803,40858..40982,41047..41295,41444..41701,41727..>41742)	Acanthamoeba castellanii str. Neff	14925473
ACA1_333310	mRNA	ACA1_333310	NW_004457693.1	41984	42729	D	ACA1_333310	join(<41984..42129,42349..42499,42619..>42729)	Acanthamoeba castellanii str. Neff	14925474
ACA1_333320	mRNA	ACA1_333320	NW_004457693.1	43030	43641	R	ACA1_333320	complement(join(<43030..43167,43235..43322,43378..43461,43535..>43641))	Acanthamoeba castellanii str. Neff	14925475
ACA1_333330	mRNA	ACA1_333330	NW_004457693.1	44170	52101	R	ACA1_333330	complement(join(<44170..44281,44377..44575,44668..44806,44898..45064,45129..45432,45519..45634,45758..46360,46473..46588,46688..46894,47029..47080,47170..47317,47455..47613,47821..47937,48023..48292,48408..48587,48724..48938,49027..49194,49336..49432,49529..49587,49676..49748,49827..49922,50019..50125,50196..50241,50326..50687,50769..50925,51047..51209,51323..51447,51521..51747,51889..51972,52044..>52101))	Acanthamoeba castellanii str. Neff	14925476
ACA1_333340	mRNA	ACA1_333340	NW_004457693.1	52449	52964	D	ACA1_333340	join(<52449..52542,52631..52816,52891..>52964)	Acanthamoeba castellanii str. Neff	14925477
ACA1_333350	mRNA	ACA1_333350	NW_004457693.1	53016	54122	R	ACA1_333350	complement(join(<53016..53232,53359..>54122))	Acanthamoeba castellanii str. Neff	14925478
ACA1_333360	mRNA	ACA1_333360	NW_004457693.1	54270	59629	R	ACA1_333360	complement(join(<54270..54455,54555..55513,55629..55775,55848..55923,56004..56135,56236..56501,56615..56825,56911..57049,57137..57311,57380..57642,57721..57892,57972..58059,58136..58327,58403..58630,58714..58858,58937..59202,59279..59362,59447..>59629))	Acanthamoeba castellanii str. Neff	14925479
ACA1_333370	mRNA	ACA1_333370	NW_004457693.1	60017	60906	R	ACA1_333370	complement(join(<60017..60408,60480..>60906))	Acanthamoeba castellanii str. Neff	14925480
ACA1_333380	mRNA	ACA1_333380	NW_004457693.1	60929	63586	R	ACA1_333380	complement(join(<60929..61080,61091..61213,61257..61528,61586..61781,61918..62041,62110..62394,62526..62769,62972..63004,63110..63263,63526..>63586))	Acanthamoeba castellanii str. Neff	14925481
ACA1_333490	mRNA	ACA1_333490	NW_004457693.1	63839	65142	D	ACA1_333490	join(<63839..63878,64002..64146,64320..64380,64698..64769,64783..64868,64941..>65142)	Acanthamoeba castellanii str. Neff	14925482
ACA1_333500	mRNA	ACA1_333500	NW_004457693.1	65445	66791	D	ACA1_333500	join(<65445..65496,66045..66092,66198..66404,66516..66559,66642..>66791)	Acanthamoeba castellanii str. Neff	14925483
ACA1_021580	mRNA	ACA1_021580	NW_004457692.1	5988	15252	D	ACA1_021580	join(<5988..6198,6326..6907,7030..7655,7767..8083,8232..8530,8648..8785,8893..9227,9315..9731,9866..9979,10093..10648,10760..11820,11922..12103,12191..12287,12303..13298,13415..13513,13554..13649,13806..14053,14172..14492,14526..>15252)	Acanthamoeba castellanii str. Neff	14925457
ACA1_021590	mRNA	ACA1_021590	NW_004457692.1	15852	19844	D	ACA1_021590	join(<15852..15943,16055..16442,16619..16796,17000..17227,17405..17570,17752..18211,18398..18622,18679..18931,19006..19242,19413..19592,19735..>19844)	Acanthamoeba castellanii str. Neff	14925456
ACA1_007310	mRNA	ACA1_007310	NW_004457691.1	13354	14058	D	ACA1_007310	join(<13354..13407,13476..13537,13629..13758,13831..>14058)	Acanthamoeba castellanii str. Neff	14925455
ACA1_038980	mRNA	ACA1_038980	NW_004457689.1	11880	12522	R	ACA1_038980	complement(join(<11880..12015,12116..12240,12289..>12522))	Acanthamoeba castellanii str. Neff	14925454
ACA1_039190	mRNA	ACA1_039190	NW_004457689.1	16409	18457	D	ACA1_039190	join(<16409..16616,16703..16836,16949..17870,17966..18028,18142..18227,18323..>18457)	Acanthamoeba castellanii str. Neff	14925446
ACA1_039200	mRNA	ACA1_039200	NW_004457689.1	19418	20369	R	ACA1_039200	complement(join(<19418..19631,19850..20139,20256..>20369))	Acanthamoeba castellanii str. Neff	14925447
ACA1_039210	mRNA	ACA1_039210	NW_004457689.1	20754	21823	R	ACA1_039210	complement(join(<20754..20925,21015..21201,21271..21412,21479..21612,21677..21722,21746..>21823))	Acanthamoeba castellanii str. Neff	14925440
ACA1_039320	mRNA	ACA1_039320	NW_004457689.1	25748	26508	D	ACA1_039320	join(<25748..25753,25843..26120,26196..26262,26374..>26508)	Acanthamoeba castellanii str. Neff	14925441
ACA1_039330	mRNA	ACA1_039330	NW_004457689.1	26701	27288	R	ACA1_039330	complement(join(<26701..26751,26820..26909,26986..27127,27221..>27288))	Acanthamoeba castellanii str. Neff	14925442
ACA1_039340	mRNA	ACA1_039340	NW_004457689.1	27517	30210	R	ACA1_039340	complement(join(<27517..27618,27697..27927,27997..28052,28244..28254,28343..28476,28546..28601,28724..28793,28902..28955,29071..29189,29259..29314,29395..29504,29635..>30210))	Acanthamoeba castellanii str. Neff	14925443
ACA1_039450	mRNA	ACA1_039450	NW_004457689.1	30357	32922	R	ACA1_039450	complement(join(<30357..30584,30671..30872,30957..31058,31130..31322,31404..31536,31634..31765,31841..31951,32020..32341,32419..32508,32585..32747,32886..>32922))	Acanthamoeba castellanii str. Neff	14925444
ACA1_039460	mRNA	ACA1_039460	NW_004457689.1	34444	36137	D	ACA1_039460	join(<34444..34485,34568..34594,34669..34834,34900..35018,35095..35157,35245..35381,35471..35569,35655..35724,35799..35873,35963..36042,36104..>36137)	Acanthamoeba castellanii str. Neff	14925445
ACA1_039470	mRNA	ACA1_039470	NW_004457689.1	36430	37515	D	ACA1_039470	join(<36430..36552,36625..36843,36914..37150,37220..37267,37330..>37515)	Acanthamoeba castellanii str. Neff	14925448
ACA1_039480	mRNA	ACA1_039480	NW_004457689.1	38116	38909	D	ACA1_039480	join(<38116..38190,38261..38458,38525..38707,38769..>38909)	Acanthamoeba castellanii str. Neff	14925449
ACA1_039490	mRNA	ACA1_039490	NW_004457689.1	40964	41848	D	ACA1_039490	join(<40964..41100,41181..41205,41399..41429,41517..>41848)	Acanthamoeba castellanii str. Neff	14925450
ACA1_039500	mRNA	ACA1_039500	NW_004457689.1	41910	43210	R	ACA1_039500	complement(join(<41910..42172,42259..42386,42481..42559,42633..42683,42755..42883,42943..>43210))	Acanthamoeba castellanii str. Neff	14925451
ACA1_039510	mRNA	ACA1_039510	NW_004457689.1	43417	44086	D	ACA1_039510	join(<43417..43773,43871..>44086)	Acanthamoeba castellanii str. Neff	14925452
ACA1_039520	mRNA	ACA1_039520	NW_004457689.1	44155	46679	R	ACA1_039520	complement(join(<44155..44494,44594..44706,44769..44890,44966..45008,45091..45267,45339..45495,45600..46148,46165..46265,46331..46473,46544..>46679))	Acanthamoeba castellanii str. Neff	14925453
ACA1_056090	mRNA	ACA1_056090	NW_004457688.1	81	346	D	ACA1_056090	join(<81..156,231..>346)	Acanthamoeba castellanii str. Neff	14925439
ACA1_056300	mRNA	ACA1_056300	NW_004457688.1	5669	6839	R	ACA1_056300	complement(join(<5669..5796,5904..6195,6355..6388,6562..>6839))	Acanthamoeba castellanii str. Neff	14925431
ACA1_056310	mRNA	ACA1_056310	NW_004457688.1	7015	8203	R	ACA1_056310	complement(join(<7015..7353,7453..7639,7717..7852,7945..>8203))	Acanthamoeba castellanii str. Neff	14925432
ACA1_056320	mRNA	ACA1_056320	NW_004457688.1	8834	9891	D	ACA1_056320	join(<8834..9058,9320..9405,9539..9765,9804..9818,9881..>9891)	Acanthamoeba castellanii str. Neff	14925433
ACA1_056430	mRNA	ACA1_056430	NW_004457688.1	11388	12665	D	ACA1_056430	join(<11388..11959,11970..12024,12151..12285,12393..12489,12529..>12665)	Acanthamoeba castellanii str. Neff	14925434
ACA1_056540	mRNA	ACA1_056540	NW_004457688.1	15094	15827	D	ACA1_056540	join(<15094..15291,15389..15563,15661..>15827)	Acanthamoeba castellanii str. Neff	14925435
ACA1_056550	mRNA	ACA1_056550	NW_004457688.1	16974	18357	R	ACA1_056550	complement(join(<16974..17344,17407..17522,17908..17971,18165..>18357))	Acanthamoeba castellanii str. Neff	14925436
ACA1_056560	mRNA	ACA1_056560	NW_004457688.1	18565	19080	D	ACA1_056560	join(<18565..18762,18883..>19080)	Acanthamoeba castellanii str. Neff	14925437
ACA1_056670	mRNA	ACA1_056670	NW_004457688.1	24967	25836	R	ACA1_056670	complement(join(<24967..25104,25188..25322,25473..25677,25799..>25836))	Acanthamoeba castellanii str. Neff	14925438
ACA1_017200	mRNA	ACA1_017200	NW_004457687.1	4704	6402	R	ACA1_017200	complement(join(<4704..5151,5243..5332,5406..5501,5589..5752,5815..5873,5960..6092,6163..6244,6313..>6402))	Acanthamoeba castellanii str. Neff	14925429
ACA1_017310	mRNA	ACA1_017310	NW_004457687.1	9493	9831	R	ACA1_017310	complement(<9493..>9831)	Acanthamoeba castellanii str. Neff	14925430
ACA1_017320	mRNA	ACA1_017320	NW_004457687.1	10690	11114	R	ACA1_017320	complement(join(<10690..10850,10979..>11114))	Acanthamoeba castellanii str. Neff	14925427
ACA1_017330	mRNA	ACA1_017330	NW_004457687.1	11438	11782	R	ACA1_017330	complement(<11438..>11782)	Acanthamoeba castellanii str. Neff	14925428
ACA1_312480	mRNA	ACA1_312480	NW_004457686.1	5001	5669	R	ACA1_312480	complement(join(<5001..5147,5234..5350,5418..5528,5613..>5669))	Acanthamoeba castellanii str. Neff	14925426
ACA1_085710	mRNA	ACA1_085710	NW_004457685.1	280	901	R	ACA1_085710	complement(join(<280..413,550..628,743..>901))	Acanthamoeba castellanii str. Neff	14925425
ACA1_085820	mRNA	ACA1_085820	NW_004457685.1	6208	7232	R	ACA1_085820	complement(join(<6208..6683,6824..>7232))	Acanthamoeba castellanii str. Neff	14925414
ACA1_085930	mRNA	ACA1_085930	NW_004457685.1	11046	13139	R	ACA1_085930	complement(join(<11046..11427,11523..11627,11755..11924,12095..12342,12419..12473,12570..12818,12924..13006,13088..>13139))	Acanthamoeba castellanii str. Neff	14925415
ACA1_085940	mRNA	ACA1_085940	NW_004457685.1	13396	14951	R	ACA1_085940	complement(join(<13396..13493,13593..13685,13765..13827,13928..13999,14083..14194,14261..14431,14512..14568,14742..>14951))	Acanthamoeba castellanii str. Neff	14925416
ACA1_085950	mRNA	ACA1_085950	NW_004457685.1	15064	16396	D	ACA1_085950	join(<15064..15253,15369..15463,15601..15673,15832..15956,16087..16234,16329..>16396)	Acanthamoeba castellanii str. Neff	14925417
ACA1_086060	mRNA	ACA1_086060	NW_004457685.1	19812	20806	R	ACA1_086060	complement(join(<19812..20004,20162..20364,20418..20612,20678..>20806))	Acanthamoeba castellanii str. Neff	14925418
ACA1_086070	mRNA	ACA1_086070	NW_004457685.1	21314	28196	R	ACA1_086070	complement(join(<21314..21556,21641..21814,21899..22107,22184..22352,22447..22601,22653..22754,22833..23305,23383..23610,23701..23829,23908..23971,25021..25271,25368..25512,25581..25743,25813..25896,26005..26370,26480..26569,26789..26984,27052..27449,27667..28007,28133..>28196))	Acanthamoeba castellanii str. Neff	14925419
ACA1_086180	mRNA	ACA1_086180	NW_004457685.1	28664	30160	D	ACA1_086180	join(<28664..29367,29456..29556,29664..29821,29918..>30160)	Acanthamoeba castellanii str. Neff	14925420
ACA1_086290	mRNA	ACA1_086290	NW_004457685.1	32428	34481	D	ACA1_086290	join(<32428..32562,32709..32832,32893..32991,33074..33189,33318..33498,33839..33908,33994..34190,34270..>34481)	Acanthamoeba castellanii str. Neff	14925421
ACA1_086300	mRNA	ACA1_086300	NW_004457685.1	34555	36156	R	ACA1_086300	complement(join(<34555..34680,34758..34827,34907..34983,35062..35201,35287..35395,35466..35526,35615..35689,35772..35874,35970..>36156))	Acanthamoeba castellanii str. Neff	14925422
ACA1_086310	mRNA	ACA1_086310	NW_004457685.1	36341	40526	D	ACA1_086310	join(<36341..36717,40174..40263,40367..>40526)	Acanthamoeba castellanii str. Neff	14925423
ACA1_086420	mRNA	ACA1_086420	NW_004457685.1	40690	42503	R	ACA1_086420	complement(join(<40690..40929,41092..41279,41384..41532,41631..41862,41949..42038,42113..42212,42327..>42503))	Acanthamoeba castellanii str. Neff	14925424
ACA1_026820	mRNA	ACA1_026820	NW_004457684.1	32	3538	D	ACA1_026820	join(<32..271,356..707,770..805,898..1007,1099..2142,2212..2627,2809..>3538)	Acanthamoeba castellanii str. Neff	14925411
ACA1_026830	mRNA	ACA1_026830	NW_004457684.1	4062	5063	D	ACA1_026830	join(<4062..4195,4260..4345,4417..4514,4586..4700,4792..4881,4933..>5063)	Acanthamoeba castellanii str. Neff	14925412
ACA1_026840	mRNA	ACA1_026840	NW_004457684.1	5242	7234	D	ACA1_026840	join(<5242..5344,5445..5622,5820..5909,6035..6206,6228..6312,6392..6592,6679..6759,6848..6989,7093..>7234)	Acanthamoeba castellanii str. Neff	14925413
ACA1_026850	mRNA	ACA1_026850	NW_004457684.1	7763	9915	R	ACA1_026850	complement(join(<7763..7922,8000..8081,8163..8401,8485..8740,8837..8997,9073..9163,9238..9453,9521..9678,9761..>9915))	Acanthamoeba castellanii str. Neff	14925409
ACA1_026860	mRNA	ACA1_026860	NW_004457684.1	10217	13065	R	ACA1_026860	complement(join(<10217..10365,10459..10562,10645..11099,11194..11571,11667..11905,11978..12236,12323..12465,12636..>13065))	Acanthamoeba castellanii str. Neff	14925410
ACA1_014620	mRNA	ACA1_014620	NW_004457683.1	37	1912	R	ACA1_014620	complement(join(<37..72,151..254,335..1006,1150..1212,1302..1382,1487..1621,1801..>1912))	Acanthamoeba castellanii str. Neff	14925408
ACA1_014630	mRNA	ACA1_014630	NW_004457683.1	2477	4200	R	ACA1_014630	complement(join(<2477..2617,2730..2852,2918..3010,3469..3567,3593..3713,3800..>4200))	Acanthamoeba castellanii str. Neff	14925406
ACA1_014740	mRNA	ACA1_014740	NW_004457683.1	6012	7260	D	ACA1_014740	join(<6012..6552,6644..6946,7007..>7260)	Acanthamoeba castellanii str. Neff	14925407
ACA1_014750	mRNA	ACA1_014750	NW_004457683.1	7979	9544	D	ACA1_014750	join(<7979..8134,8237..8281,8384..8496,8586..8717,8802..8872,8935..9025,9125..9300,9363..>9544)	Acanthamoeba castellanii str. Neff	14925402
ACA1_014760	mRNA	ACA1_014760	NW_004457683.1	10372	11156	R	ACA1_014760	complement(join(<10372..10538,10639..10800,10906..10981,11085..>11156))	Acanthamoeba castellanii str. Neff	14925403
ACA1_014870	mRNA	ACA1_014870	NW_004457683.1	13147	14276	D	ACA1_014870	join(<13147..13193,13277..13389,13466..13605,13703..13753,13830..13950,14026..14082,14155..>14276)	Acanthamoeba castellanii str. Neff	14925404
ACA1_014880	mRNA	ACA1_014880	NW_004457683.1	14302	14841	R	ACA1_014880	complement(join(<14302..14599,14681..>14841))	Acanthamoeba castellanii str. Neff	14925405
ACA1_013340	mRNA	ACA1_013340	NW_004457682.1	14	2435	D	ACA1_013340	join(<14..142,220..376,457..1388,1490..1568,1675..1829,1918..2040,2118..2258,2322..>2435)	Acanthamoeba castellanii str. Neff	14925401
ACA1_013350	mRNA	ACA1_013350	NW_004457682.1	2488	4406	R	ACA1_013350	complement(join(<2488..3423,3438..>4406))	Acanthamoeba castellanii str. Neff	14925400
ACA1_013360	mRNA	ACA1_013360	NW_004457682.1	5038	6596	R	ACA1_013360	complement(join(<5038..5966,6059..6183,6277..6431,6534..>6596))	Acanthamoeba castellanii str. Neff	14925397
ACA1_013370	mRNA	ACA1_013370	NW_004457682.1	7016	7530	D	ACA1_013370	join(<7016..7061,7144..7299,7394..>7530)	Acanthamoeba castellanii str. Neff	14925396
ACA1_013380	mRNA	ACA1_013380	NW_004457682.1	7655	10365	D	ACA1_013380	join(<7655..7740,7894..8146,8253..8396,8477..8590,8651..8762,8905..9030,9117..9222,9326..9468,9592..9740,9862..>10365)	Acanthamoeba castellanii str. Neff	14925398
ACA1_013390	mRNA	ACA1_013390	NW_004457682.1	10489	14222	R	ACA1_013390	complement(join(<10489..10539,10655..10900,11027..11263,11401..11456,11584..11683,11777..11833,11926..12035,12125..12176,12302..12434,12515..12592,12701..12802,12913..12926,12958..13121,13231..13272,13358..13444,13512..13623,13700..13812,13898..>14222))	Acanthamoeba castellanii str. Neff	14925399
ACA1_165080	mRNA	ACA1_165080	NW_004457681.1	70	428	R	ACA1_165080	complement(join(<70..234,315..>428))	Acanthamoeba castellanii str. Neff	14925395
ACA1_165090	mRNA	ACA1_165090	NW_004457681.1	847	3850	D	ACA1_165090	join(<847..1068,1290..1389,1482..1559,1658..1742,1913..2027,2162..2248,2388..2486,2640..2721,2895..3060,3363..3467,3628..3786,3832..>3850)	Acanthamoeba castellanii str. Neff	14925351
ACA1_165200	mRNA	ACA1_165200	NW_004457681.1	7096	7287	R	ACA1_165200	complement(<7096..>7287)	Acanthamoeba castellanii str. Neff	14925352
ACA1_165210	mRNA	ACA1_165210	NW_004457681.1	7614	8705	R	ACA1_165210	complement(join(<7614..7703,7780..7959,8054..8147,8251..8287,8433..8585,8678..>8705))	Acanthamoeba castellanii str. Neff	14925353
ACA1_165230	mRNA	ACA1_165230	NW_004457681.1	13629	14513	R	ACA1_165230	complement(join(<13629..14174,14380..14460,14496..>14513))	Acanthamoeba castellanii str. Neff	14925355
ACA1_165240	mRNA	ACA1_165240	NW_004457681.1	14530	15554	R	ACA1_165240	complement(join(<14530..14679,14752..14853,15036..15142,15239..>15554))	Acanthamoeba castellanii str. Neff	14925356
ACA1_165250	mRNA	ACA1_165250	NW_004457681.1	15840	17529	D	ACA1_165250	join(<15840..15927,16029..16070,16182..16249,16382..16467,16615..16745,16854..17160,17261..17372,17479..>17529)	Acanthamoeba castellanii str. Neff	14925357
ACA1_165260	mRNA	ACA1_165260	NW_004457681.1	17714	22375	R	ACA1_165260	complement(join(<17714..19090,19291..19400,19502..19609,19750..19846,19986..20165,20421..20582,20696..20791,20900..21007,21089..21256,21377..>22375))	Acanthamoeba castellanii str. Neff	14925358
ACA1_165270	mRNA	ACA1_165270	NW_004457681.1	23025	23782	D	ACA1_165270	join(<23025..23130,23232..>23782)	Acanthamoeba castellanii str. Neff	14925359
ACA1_165280	mRNA	ACA1_165280	NW_004457681.1	24050	27087	R	ACA1_165280	complement(join(<24050..25096,25202..25341,25447..25500,25581..25839,26036..26098,26269..26334,26618..26737,26872..26910,27046..>27087))	Acanthamoeba castellanii str. Neff	14925360
ACA1_165390	mRNA	ACA1_165390	NW_004457681.1	28307	30341	R	ACA1_165390	complement(join(<28307..28576,28714..28827,28991..29100,29168..29183,29700..29817,29896..30038,30228..>30341))	Acanthamoeba castellanii str. Neff	14925361
ACA1_165500	mRNA	ACA1_165500	NW_004457681.1	31209	33405	R	ACA1_165500	complement(join(<31209..31469,31586..31699,31872..31981,32052..32095,32229..32333,32433..32506,32611..32781,32854..33134,33288..>33405))	Acanthamoeba castellanii str. Neff	14925362
ACA1_165510	mRNA	ACA1_165510	NW_004457681.1	33566	35287	D	ACA1_165510	join(<33566..33773,33973..34174,34275..34324,34406..34470,34582..34712,34779..34844,34962..35063,35167..>35287)	Acanthamoeba castellanii str. Neff	14925363
ACA1_165520	mRNA	ACA1_165520	NW_004457681.1	35455	39156	D	ACA1_165520	join(<35455..35562,35745..35876,35971..36923,37027..37263,37388..37436,37563..37700,37806..37955,38036..38078,38190..38290,38386..38419,38558..38619,38709..38825,38882..38932,39061..>39156)	Acanthamoeba castellanii str. Neff	14925364
ACA1_165530	mRNA	ACA1_165530	NW_004457681.1	39285	42718	R	ACA1_165530	complement(join(<39285..39488,39631..39699,39789..39897,39993..40043,40254..40307,40460..40514,40608..40743,40883..41014,41162..41350,41495..41568,41729..41868,41963..42162,42239..42388,42632..>42718))	Acanthamoeba castellanii str. Neff	14925365
ACA1_165540	mRNA	ACA1_165540	NW_004457681.1	42868	43486	R	ACA1_165540	complement(join(<42868..42976,43098..43220,43341..>43486))	Acanthamoeba castellanii str. Neff	14925366
ACA1_165550	mRNA	ACA1_165550	NW_004457681.1	43644	45058	R	ACA1_165550	complement(join(<43644..43918,44049..44148,44360..44559,44688..44797,44961..>45058))	Acanthamoeba castellanii str. Neff	14925367
ACA1_165560	mRNA	ACA1_165560	NW_004457681.1	45262	45784	D	ACA1_165560	join(<45262..45506,45583..>45784)	Acanthamoeba castellanii str. Neff	14925368
ACA1_165570	mRNA	ACA1_165570	NW_004457681.1	45881	53273	R	ACA1_165570	complement(join(<45881..46128,46230..46415,46531..46656,46747..46872,46993..47349,47422..48008,48089..48277,48365..48501,48635..48732,48819..49204,49302..49750,49832..50037,50155..50458,50543..50656,50837..51268,51421..51552,52034..52178,52271..52569,52759..52889,53028..53228,53240..>53273))	Acanthamoeba castellanii str. Neff	14925369
ACA1_165580	mRNA	ACA1_165580	NW_004457681.1	53595	57282	R	ACA1_165580	complement(join(<53595..53792,53937..54132,54224..54434,54518..54574,54642..54963,55047..55175,55238..55468,55594..55681,55785..55897,55990..56206,56296..56407,56480..56587,56751..56858,56979..>57282))	Acanthamoeba castellanii str. Neff	14925370
ACA1_165590	mRNA	ACA1_165590	NW_004457681.1	57633	58807	D	ACA1_165590	join(<57633..57819,57906..58014,58141..58319,58430..58618,58650..58665,58738..>58807)	Acanthamoeba castellanii str. Neff	14925371
ACA1_165600	mRNA	ACA1_165600	NW_004457681.1	58962	61873	R	ACA1_165600	complement(join(<58962..59175,59265..59351,59501..59568,59670..59747,59852..59988,60099..60239,60367..60502,60653..60747,60855..61145,61323..61474,61570..61708,61786..>61873))	Acanthamoeba castellanii str. Neff	14925372
ACA1_165620	mRNA	ACA1_165620	NW_004457681.1	64367	64618	D	ACA1_165620	join(<64367..64508,64596..>64618)	Acanthamoeba castellanii str. Neff	14925374
ACA1_165630	mRNA	ACA1_165630	NW_004457681.1	65654	66077	R	ACA1_165630	complement(join(<65654..65759,65914..>66077))	Acanthamoeba castellanii str. Neff	14925375
ACA1_165640	mRNA	ACA1_165640	NW_004457681.1	67064	67521	D	ACA1_165640	join(<67064..67158,67269..>67521)	Acanthamoeba castellanii str. Neff	14925376
ACA1_165650	mRNA	ACA1_165650	NW_004457681.1	68228	72714	D	ACA1_165650	join(<68228..68487,68561..68610,68737..68977,69236..69350,69511..69591,69743..69924,70080..70278,70380..70622,70753..70834,70913..71049,71137..71171,71424..71528,71603..71727,72213..72260,72341..72424,72491..>72714)	Acanthamoeba castellanii str. Neff	14925377
ACA1_165660	mRNA	ACA1_165660	NW_004457681.1	74048	74734	D	ACA1_165660	<74048..>74734	Acanthamoeba castellanii str. Neff	14925378
ACA1_165670	mRNA	ACA1_165670	NW_004457681.1	75179	75974	D	ACA1_165670	join(<75179..75208,75296..75413,75545..75638,75764..>75974)	Acanthamoeba castellanii str. Neff	14925379
ACA1_165680	mRNA	ACA1_165680	NW_004457681.1	76755	82367	D	ACA1_165680	join(<76755..77153,77322..77392,77663..77744,77913..78046,78182..78355,78471..78535,78682..78852,78973..79104,79218..79648,79777..79976,80087..80205,80340..80515,80605..80707,80804..80981,81071..81121,81249..81361,81455..81807,81888..82047,82150..>82367)	Acanthamoeba castellanii str. Neff	14925380
ACA1_165790	mRNA	ACA1_165790	NW_004457681.1	82684	83974	R	ACA1_165790	complement(join(<82684..82811,82924..83168,83275..83464,83566..83591,83865..>83974))	Acanthamoeba castellanii str. Neff	14925381
ACA1_165800	mRNA	ACA1_165800	NW_004457681.1	84216	85738	D	ACA1_165800	join(<84216..84572,84691..84792,84869..84951,85098..85324,85452..>85738)	Acanthamoeba castellanii str. Neff	14925382
ACA1_165810	mRNA	ACA1_165810	NW_004457681.1	85888	90912	D	ACA1_165810	join(<85888..85968,86092..86221,86324..86379,86488..86628,86649..86787,86910..87005,87080..87145,87279..87344,87494..87636,87753..87900,88020..88033,88261..88434,88532..88605,88705..88864,88947..89129,89212..89328,89414..89569,89654..89732,89847..89944,90067..90150,90264..90376,90471..90544,90653..>90912)	Acanthamoeba castellanii str. Neff	14925383
ACA1_165820	mRNA	ACA1_165820	NW_004457681.1	91012	97543	R	ACA1_165820	complement(join(<91012..91395,91591..92133,92261..92498,92621..92825,92916..93079,93205..93277,93365..93421,93548..93725,93923..94051,94197..94334,94418..94549,94654..94803,94900..94999,95133..95274,95434..95630,95749..95834,95991..96213,96333..96841,97073..>97543))	Acanthamoeba castellanii str. Neff	14925384
ACA1_165830	mRNA	ACA1_165830	NW_004457681.1	97782	99073	R	ACA1_165830	complement(join(<97782..97987,98106..98226,98367..98409,98512..98585,98640..98676,98775..98918,99009..>99073))	Acanthamoeba castellanii str. Neff	14925385
ACA1_165840	mRNA	ACA1_165840	NW_004457681.1	99875	100710	D	ACA1_165840	join(<99875..99948,100053..>100710)	Acanthamoeba castellanii str. Neff	14925386
ACA1_165850	mRNA	ACA1_165850	NW_004457681.1	101442	108035	R	ACA1_165850	complement(join(<101442..101718,101810..101964,102104..102309,102471..102917,103020..103279,103353..104264,104344..104617,104707..104803,104901..105017,105146..105259,105405..105538,105604..105851,105930..106086,106173..106320,106397..106534,106622..106702,106959..107437,107527..107864,107953..>108035))	Acanthamoeba castellanii str. Neff	14925387
ACA1_165960	mRNA	ACA1_165960	NW_004457681.1	108274	109622	R	ACA1_165960	complement(join(<108274..108844,108950..109223,109312..109408,109506..>109622))	Acanthamoeba castellanii str. Neff	14925388
ACA1_166070	mRNA	ACA1_166070	NW_004457681.1	110876	112375	R	ACA1_166070	complement(join(<110876..110986,111082..111317,111408..111585,111678..111853,111930..112050,112169..>112375))	Acanthamoeba castellanii str. Neff	14925389
ACA1_166080	mRNA	ACA1_166080	NW_004457681.1	112681	116522	D	ACA1_166080	join(<112681..112821,112973..113093,113229..113323,113469..113556,113726..113787,113858..114061,114163..114280,114369..114580,114660..114828,114897..115005,115089..115216,115294..115394,115462..115665,115785..115940,116021..116092,116166..>116522)	Acanthamoeba castellanii str. Neff	14925390
ACA1_166090	mRNA	ACA1_166090	NW_004457681.1	116598	118246	D	ACA1_166090	join(<116598..116721,116900..117158,117270..117358,117487..117631,117699..117938,118015..>118246)	Acanthamoeba castellanii str. Neff	14925391
ACA1_166100	mRNA	ACA1_166100	NW_004457681.1	120046	122902	R	ACA1_166100	complement(join(<120046..120126,120229..120362,120460..120892,121001..121107,121224..121457,121520..121738,121876..>122902))	Acanthamoeba castellanii str. Neff	14925392
ACA1_166110	mRNA	ACA1_166110	NW_004457681.1	123069	123584	D	ACA1_166110	join(<123069..123281,123321..>123584)	Acanthamoeba castellanii str. Neff	14925393
ACA1_166120	mRNA	ACA1_166120	NW_004457681.1	124970	125395	R	ACA1_166120	complement(<124970..>125395)	Acanthamoeba castellanii str. Neff	14925394
ACA1_356100	mRNA	ACA1_356100	NW_004457680.1	31	5293	D	ACA1_356100	join(<31..229,328..1346,1416..1646,1734..1881,1951..2225,2324..2449,2566..2716,2797..2922,2994..3249,3338..3445,3523..3937,4021..4167,4233..4430,4543..4689,4762..4898,4996..>5293)	Acanthamoeba castellanii str. Neff	14925350
ACA1_356110	mRNA	ACA1_356110	NW_004457680.1	5293	6882	D	ACA1_356110	join(<5293..5782,5846..5973,6038..6217,6239..6331,6409..>6882)	Acanthamoeba castellanii str. Neff	14925330
ACA1_356120	mRNA	ACA1_356120	NW_004457680.1	7200	9361	R	ACA1_356120	complement(join(<7200..8276,8369..8605,8682..8855,8981..>9361))	Acanthamoeba castellanii str. Neff	14925329
ACA1_356130	mRNA	ACA1_356130	NW_004457680.1	9836	10270	D	ACA1_356130	<9836..>10270	Acanthamoeba castellanii str. Neff	14925331
ACA1_356140	mRNA	ACA1_356140	NW_004457680.1	10543	18809	R	ACA1_356140	complement(join(<10543..10757,10836..10980,11079..11195,11279..11458,11547..11714,11776..12052,12196..12581,12662..12828,12907..13120,13234..13337,13415..13559,13642..13971,14091..14250,14388..14470,14561..14755,14828..15056,15200..15279,15360..15443,15753..15878,15964..16251,16340..16858,17015..17143,17272..17434,17529..17680,17832..>18809))	Acanthamoeba castellanii str. Neff	14925332
ACA1_356150	mRNA	ACA1_356150	NW_004457680.1	19030	19942	R	ACA1_356150	complement(join(<19030..19075,19178..19349,19434..19560,19647..19792,19930..>19942))	Acanthamoeba castellanii str. Neff	14925333
ACA1_356170	mRNA	ACA1_356170	NW_004457680.1	22910	23535	D	ACA1_356170	join(<22910..23146,23434..>23535)	Acanthamoeba castellanii str. Neff	14925335
ACA1_356180	mRNA	ACA1_356180	NW_004457680.1	24002	25654	D	ACA1_356180	join(<24002..24616,24690..24792,24884..25466,25546..>25654)	Acanthamoeba castellanii str. Neff	14925336
ACA1_356190	mRNA	ACA1_356190	NW_004457680.1	25981	28553	D	ACA1_356190	join(<25981..26308,26425..26785,26909..27145,28319..>28553)	Acanthamoeba castellanii str. Neff	14925337
ACA1_356310	mRNA	ACA1_356310	NW_004457680.1	34695	35286	R	ACA1_356310	complement(join(<34695..34835,34915..>35286))	Acanthamoeba castellanii str. Neff	14925339
ACA1_356420	mRNA	ACA1_356420	NW_004457680.1	36112	36294	D	ACA1_356420	<36112..>36294	Acanthamoeba castellanii str. Neff	14925340
ACA1_356530	mRNA	ACA1_356530	NW_004457680.1	36501	39133	R	ACA1_356530	complement(join(<36501..36923,37076..37141,37234..37317,37403..37463,37542..37606,37685..37789,37863..37914,37991..38927,39040..>39133))	Acanthamoeba castellanii str. Neff	14925341
ACA1_356540	mRNA	ACA1_356540	NW_004457680.1	39411	39758	R	ACA1_356540	complement(join(<39411..39575,39678..>39758))	Acanthamoeba castellanii str. Neff	14925342
ACA1_356650	mRNA	ACA1_356650	NW_004457680.1	40462	40749	R	ACA1_356650	complement(join(<40462..40507,40610..>40749))	Acanthamoeba castellanii str. Neff	14925343
ACA1_356760	mRNA	ACA1_356760	NW_004457680.1	42133	43518	R	ACA1_356760	complement(join(<42133..42308,42407..42650,42746..42858,42963..43124,43223..43412,43498..>43518))	Acanthamoeba castellanii str. Neff	14925344
ACA1_356770	mRNA	ACA1_356770	NW_004457680.1	43823	46816	R	ACA1_356770	complement(join(<43823..44038,44140..44446,44537..44994,45082..45201,45294..45410,45505..45657,45760..45967,46100..46247,46391..46491,46573..46630,46705..>46816))	Acanthamoeba castellanii str. Neff	14925345
ACA1_356780	mRNA	ACA1_356780	NW_004457680.1	47318	48494	R	ACA1_356780	complement(join(<47318..47378,47458..47532,47592..47685,47772..47834,47915..48071,48149..48277,48339..>48494))	Acanthamoeba castellanii str. Neff	14925346
ACA1_356790	mRNA	ACA1_356790	NW_004457680.1	48823	51187	D	ACA1_356790	join(<48823..48862,48932..49019,49087..49150,49283..49405,49512..49542,49627..49714,49791..49856,49937..50050,50123..50189,50272..50402,50478..50590,50652..50757,50839..>51187)	Acanthamoeba castellanii str. Neff	14925347
ACA1_356800	mRNA	ACA1_356800	NW_004457680.1	51643	58867	D	ACA1_356800	join(<51643..52377,52466..53322,53416..53826,53908..54014,54141..54999,55092..55428,55445..55680,55944..56091,56183..56299,56408..56840,56942..57183,57254..>58867)	Acanthamoeba castellanii str. Neff	14925348
ACA1_356810	mRNA	ACA1_356810	NW_004457680.1	59007	62671	R	ACA1_356810	complement(join(<59007..59072,59154..60047,60179..60274,60347..60454,60616..60837,60942..61089,61202..61291,61420..61517,61618..61708,61781..61885,61985..62064,62137..62224,62316..62414,62532..>62671))	Acanthamoeba castellanii str. Neff	14925349
ACA1_003860	mRNA	ACA1_003860	NW_004457679.1	1795	2283	D	ACA1_003860	<1795..>2283	Acanthamoeba castellanii str. Neff	14925327
ACA1_003870	mRNA	ACA1_003870	NW_004457679.1	2400	4010	R	ACA1_003870	complement(join(<2400..2544,3193..3315,3409..>4010))	Acanthamoeba castellanii str. Neff	14925323
ACA1_004080	mRNA	ACA1_004080	NW_004457679.1	4662	5404	R	ACA1_004080	complement(<4662..>5404)	Acanthamoeba castellanii str. Neff	14925324
ACA1_004190	mRNA	ACA1_004190	NW_004457679.1	10325	11413	R	ACA1_004190	complement(join(<10325..10447,10528..10582,10661..10779,10876..11159,11236..>11413))	Acanthamoeba castellanii str. Neff	14925325
ACA1_004200	mRNA	ACA1_004200	NW_004457679.1	11603	12956	R	ACA1_004200	complement(join(<11603..11794,11865..12053,12125..12239,12320..12516,12613..12737,12815..>12956))	Acanthamoeba castellanii str. Neff	14925326
ACA1_338390	mRNA	ACA1_338390	NW_004457678.1	238	755	R	ACA1_338390	complement(join(<238..252,325..575,662..>755))	Acanthamoeba castellanii str. Neff	14925322
ACA1_338400	mRNA	ACA1_338400	NW_004457678.1	2604	3936	D	ACA1_338400	join(<2604..2803,2897..2954,3077..3151,3181..3240,3302..3348,3437..3536,3646..>3936)	Acanthamoeba castellanii str. Neff	14925321
ACA1_338420	mRNA	ACA1_338420	NW_004457678.1	15598	16410	R	ACA1_338420	complement(join(<15598..15856,15883..15919,15931..15987,16208..16272,16379..>16410))	Acanthamoeba castellanii str. Neff	14925317
ACA1_338630	mRNA	ACA1_338630	NW_004457678.1	18907	19599	D	ACA1_338630	join(<18907..19007,19079..19154,19202..19327,19396..>19599)	Acanthamoeba castellanii str. Neff	14925319
ACA1_338640	mRNA	ACA1_338640	NW_004457678.1	19719	20778	R	ACA1_338640	complement(join(<19719..19863,19973..20180,20314..20371,20452..20574,20662..>20778))	Acanthamoeba castellanii str. Neff	14925320
ACA1_168800	mRNA	ACA1_168800	NW_004457677.1	19	789	R	ACA1_168800	complement(join(<19..207,315..513,581..>789))	Acanthamoeba castellanii str. Neff	14925316
ACA1_168910	mRNA	ACA1_168910	NW_004457677.1	2721	3491	R	ACA1_168910	complement(join(<2721..3410,3483..>3491))	Acanthamoeba castellanii str. Neff	14925269
ACA1_168920	mRNA	ACA1_168920	NW_004457677.1	5043	7192	D	ACA1_168920	join(<5043..5156,5639..>7192)	Acanthamoeba castellanii str. Neff	14925270
ACA1_168930	mRNA	ACA1_168930	NW_004457677.1	7655	10336	D	ACA1_168930	join(<7655..7861,8029..8190,8292..8408,8584..8689,8782..8988,9117..9237,9313..9422,9487..9530,9659..>10336)	Acanthamoeba castellanii str. Neff	14925271
ACA1_168940	mRNA	ACA1_168940	NW_004457677.1	10808	12465	R	ACA1_168940	complement(join(<10808..11137,11419..12004,12113..>12465))	Acanthamoeba castellanii str. Neff	14925272
ACA1_169050	mRNA	ACA1_169050	NW_004457677.1	12568	12972	R	ACA1_169050	complement(<12568..>12972)	Acanthamoeba castellanii str. Neff	14925273
ACA1_169060	mRNA	ACA1_169060	NW_004457677.1	13093	14265	R	ACA1_169060	complement(join(<13093..13168,13263..13389,13500..13677,13779..13860,13962..14035,14113..>14265))	Acanthamoeba castellanii str. Neff	14925274
ACA1_169070	mRNA	ACA1_169070	NW_004457677.1	14566	17555	D	ACA1_169070	join(<14566..14716,14816..14876,14956..15077,15166..15360,15446..15943,16039..16274,16367..16591,16703..17133,17212..17306,17413..>17555)	Acanthamoeba castellanii str. Neff	14925275
ACA1_169080	mRNA	ACA1_169080	NW_004457677.1	17875	19310	D	ACA1_169080	join(<17875..18648,18752..18908,19018..19087,19175..>19310)	Acanthamoeba castellanii str. Neff	14925276
ACA1_169090	mRNA	ACA1_169090	NW_004457677.1	19421	21451	R	ACA1_169090	complement(join(<19421..19643,19750..20042,20157..20237,20339..20439,20533..20685,20797..20881,21014..21108,21197..21248,21314..>21451))	Acanthamoeba castellanii str. Neff	14925277
ACA1_169100	mRNA	ACA1_169100	NW_004457677.1	21576	22437	D	ACA1_169100	join(<21576..21846,21918..22012,22081..22157,22248..>22437)	Acanthamoeba castellanii str. Neff	14925278
ACA1_169110	mRNA	ACA1_169110	NW_004457677.1	22600	25327	R	ACA1_169110	complement(join(<22600..23686,23765..23916,24011..24074,24167..24336,24420..24584,24665..24868,24961..25091,25200..25215,25244..>25327))	Acanthamoeba castellanii str. Neff	14925279
ACA1_169220	mRNA	ACA1_169220	NW_004457677.1	29421	32347	D	ACA1_169220	join(<29421..29429,29501..29635,29717..30116,30197..30288,30640..30735,30819..30938,31020..31092,31183..31244,31341..31428,31516..31631,31699..31951,32016..>32347)	Acanthamoeba castellanii str. Neff	14925280
ACA1_169330	mRNA	ACA1_169330	NW_004457677.1	32596	33319	R	ACA1_169330	complement(join(<32596..32608,32718..>33319))	Acanthamoeba castellanii str. Neff	14925281
ACA1_169540	mRNA	ACA1_169540	NW_004457677.1	38090	38761	D	ACA1_169540	<38090..>38761	Acanthamoeba castellanii str. Neff	14925282
ACA1_169550	mRNA	ACA1_169550	NW_004457677.1	39348	41521	D	ACA1_169550	join(<39348..39622,39709..39850,39924..40028,40115..40428,40525..40653,40727..40848,40965..>41521)	Acanthamoeba castellanii str. Neff	14925283
ACA1_169560	mRNA	ACA1_169560	NW_004457677.1	41895	42817	D	ACA1_169560	join(<41895..41972,42071..>42817)	Acanthamoeba castellanii str. Neff	14925284
ACA1_169570	mRNA	ACA1_169570	NW_004457677.1	43055	43876	D	ACA1_169570	<43055..>43876	Acanthamoeba castellanii str. Neff	14925285
ACA1_169580	mRNA	ACA1_169580	NW_004457677.1	44258	45886	D	ACA1_169580	join(<44258..44417,44530..44606,44691..44873,44960..45073,45167..>45886)	Acanthamoeba castellanii str. Neff	14925286
ACA1_169590	mRNA	ACA1_169590	NW_004457677.1	46474	49935	D	ACA1_169590	join(<46474..46748,46832..46973,47040..47144,47231..47544,47642..47770,47844..47965,48082..48617,48979..49092,49192..>49935)	Acanthamoeba castellanii str. Neff	14925287
ACA1_169700	mRNA	ACA1_169700	NW_004457677.1	50571	53971	D	ACA1_169700	join(<50571..50934,51012..51254,51318..51430,51542..51827,51926..51989,52026..52081,52165..52290,52381..52679,52690..53605,53712..>53971)	Acanthamoeba castellanii str. Neff	14925288
ACA1_169710	mRNA	ACA1_169710	NW_004457677.1	54637	57862	D	ACA1_169710	join(<54637..54745,54905..55230,55365..55424,55517..55569,55761..55954,56107..56275,56356..56576,56667..56762,56839..56999,57087..57204,57329..57426,57524..57664,57755..>57862)	Acanthamoeba castellanii str. Neff	14925289
ACA1_169720	mRNA	ACA1_169720	NW_004457677.1	57979	59555	D	ACA1_169720	join(<57979..58946,59066..>59555)	Acanthamoeba castellanii str. Neff	14925290
ACA1_169730	mRNA	ACA1_169730	NW_004457677.1	60038	60223	D	ACA1_169730	<60038..>60223	Acanthamoeba castellanii str. Neff	14925291
ACA1_169740	mRNA	ACA1_169740	NW_004457677.1	60258	60620	R	ACA1_169740	complement(join(<60258..60278,60354..>60620))	Acanthamoeba castellanii str. Neff	14925292
ACA1_169750	mRNA	ACA1_169750	NW_004457677.1	60890	61279	R	ACA1_169750	complement(<60890..>61279)	Acanthamoeba castellanii str. Neff	14925293
ACA1_169760	mRNA	ACA1_169760	NW_004457677.1	61324	63563	D	ACA1_169760	join(<61324..61411,61649..61854,61998..62101,62230..62361,62496..62620,62698..62882,62974..63030,63085..63475,63493..>63563)	Acanthamoeba castellanii str. Neff	14925294
ACA1_169770	mRNA	ACA1_169770	NW_004457677.1	63473	64042	R	ACA1_169770	complement(join(<63473..63613,63652..63757,63849..>64042))	Acanthamoeba castellanii str. Neff	14925295
ACA1_169880	mRNA	ACA1_169880	NW_004457677.1	65985	67061	R	ACA1_169880	complement(join(<65985..66120,66205..66593,66749..66900,66971..>67061))	Acanthamoeba castellanii str. Neff	14925296
ACA1_169890	mRNA	ACA1_169890	NW_004457677.1	67466	69125	D	ACA1_169890	join(<67466..67841,67917..68040,68138..68258,68341..68493,68690..68790,68873..68986,69107..>69125)	Acanthamoeba castellanii str. Neff	14925297
ACA1_170100	mRNA	ACA1_170100	NW_004457677.1	71152	72300	D	ACA1_170100	join(<71152..71331,71420..71520,71608..71717,71845..72123,72188..>72300)	Acanthamoeba castellanii str. Neff	14925298
ACA1_170210	mRNA	ACA1_170210	NW_004457677.1	72586	73808	R	ACA1_170210	complement(join(<72586..72847,72937..73019,73096..73366,73435..>73808))	Acanthamoeba castellanii str. Neff	14925299
ACA1_170220	mRNA	ACA1_170220	NW_004457677.1	74108	74755	D	ACA1_170220	join(<74108..74378,74457..>74755)	Acanthamoeba castellanii str. Neff	14925300
ACA1_170230	mRNA	ACA1_170230	NW_004457677.1	75260	75641	R	ACA1_170230	complement(join(<75260..75522,75620..>75641))	Acanthamoeba castellanii str. Neff	14925301
ACA1_170240	mRNA	ACA1_170240	NW_004457677.1	76061	78316	R	ACA1_170240	complement(join(<76061..76181,76270..76313,76385..76455,76527..76597,76675..76824,76898..76958,77033..77215,77287..77644,77729..77817,77907..77970,78052..78117,78176..>78316))	Acanthamoeba castellanii str. Neff	14925302
ACA1_170250	mRNA	ACA1_170250	NW_004457677.1	78949	80282	R	ACA1_170250	complement(join(<78949..78992,79017..79137,79255..79492,79601..79790,79886..>80282))	Acanthamoeba castellanii str. Neff	14925303
ACA1_170260	mRNA	ACA1_170260	NW_004457677.1	80845	81119	D	ACA1_170260	join(<80845..80967,81042..>81119)	Acanthamoeba castellanii str. Neff	14925304
ACA1_170270	mRNA	ACA1_170270	NW_004457677.1	81404	84366	D	ACA1_170270	join(<81404..81429,81527..81647,81878..82891,82987..>84366)	Acanthamoeba castellanii str. Neff	14925305
ACA1_170280	mRNA	ACA1_170280	NW_004457677.1	84434	85519	R	ACA1_170280	complement(join(<84434..84574,84637..85068,85093..85211,85276..85396,85463..>85519))	Acanthamoeba castellanii str. Neff	14925306
ACA1_170290	mRNA	ACA1_170290	NW_004457677.1	85790	86985	D	ACA1_170290	join(<85790..85997,86094..86200,86276..86396,86501..86574,86640..86771,86872..>86985)	Acanthamoeba castellanii str. Neff	14925307
ACA1_170300	mRNA	ACA1_170300	NW_004457677.1	87242	90484	D	ACA1_170300	join(<87242..87308,87440..87573,87639..87740,87839..87926,88051..88191,88263..88343,88497..88690,88719..88860,88938..89007,89098..89193,89276..89505,89602..89725,89852..89997,90062..90177,90293..>90484)	Acanthamoeba castellanii str. Neff	14925308
ACA1_170310	mRNA	ACA1_170310	NW_004457677.1	90682	91215	D	ACA1_170310	join(<90682..90758,90822..90931,91019..>91215)	Acanthamoeba castellanii str. Neff	14925309
ACA1_170320	mRNA	ACA1_170320	NW_004457677.1	92023	93153	R	ACA1_170320	complement(<92023..>93153)	Acanthamoeba castellanii str. Neff	14925310
ACA1_170530	mRNA	ACA1_170530	NW_004457677.1	95153	96845	R	ACA1_170530	complement(join(<95153..95221,95241..95451,95576..96048,96705..>96845))	Acanthamoeba castellanii str. Neff	14925311
ACA1_170640	mRNA	ACA1_170640	NW_004457677.1	98219	99970	D	ACA1_170640	join(<98219..98356,98417..98449,98529..98580,98665..98781,98871..98981,99060..99094,99161..99230,99298..99387,99487..99628,99713..99812,99896..>99970)	Acanthamoeba castellanii str. Neff	14925312
ACA1_170660	mRNA	ACA1_170660	NW_004457677.1	102654	104723	D	ACA1_170660	<102654..>104723	Acanthamoeba castellanii str. Neff	14925314
ACA1_170670	mRNA	ACA1_170670	NW_004457677.1	104804	107323	D	ACA1_170670	join(<104804..104872,104944..105093,105172..105287,105368..105661,105733..105897,106066..106236,106299..106497,106585..106680,106755..106932,107012..>107323)	Acanthamoeba castellanii str. Neff	14925315
ACA1_271960	mRNA	ACA1_271960	NW_004457676.1	72	485	R	ACA1_271960	complement(join(<72..143,193..>485))	Acanthamoeba castellanii str. Neff	14925268
ACA1_271970	mRNA	ACA1_271970	NW_004457676.1	1111	1689	R	ACA1_271970	complement(join(<1111..1491,1603..>1689))	Acanthamoeba castellanii str. Neff	14925267
ACA1_272080	mRNA	ACA1_272080	NW_004457676.1	2857	4386	R	ACA1_272080	complement(join(<2857..2928,3105..3476,3588..3772,3884..4178,4219..4234,4289..>4386))	Acanthamoeba castellanii str. Neff	14925231
ACA1_272090	mRNA	ACA1_272090	NW_004457676.1	4704	9719	R	ACA1_272090	complement(join(<4704..5009,5102..5280,5434..5527,5656..5728,5814..5866,5942..6321,6389..6438,6510..6706,6861..7435,7532..7831,7898..8160,8292..8358,8478..8618,8720..8843,9021..9087,9184..9333,9414..9432,9509..9583,9692..>9719))	Acanthamoeba castellanii str. Neff	14925232
ACA1_272100	mRNA	ACA1_272100	NW_004457676.1	12726	17460	D	ACA1_272100	join(<12726..13478,14201..16684,16790..16994,17089..17125,17217..>17460)	Acanthamoeba castellanii str. Neff	14925233
ACA1_272220	mRNA	ACA1_272220	NW_004457676.1	18386	19064	D	ACA1_272220	join(<18386..18428,18471..18568,18692..18868,18981..>19064)	Acanthamoeba castellanii str. Neff	14925230
ACA1_272240	mRNA	ACA1_272240	NW_004457676.1	38411	40880	D	ACA1_272240	join(<38411..38539,38559..38927,39004..39091,39207..39308,39414..39561,39647..39923,40004..40224,40295..40444,40549..40677,40751..>40880)	Acanthamoeba castellanii str. Neff	14925235
ACA1_272250	mRNA	ACA1_272250	NW_004457676.1	41010	41639	R	ACA1_272250	complement(join(<41010..41508,41575..>41639))	Acanthamoeba castellanii str. Neff	14925236
ACA1_272260	mRNA	ACA1_272260	NW_004457676.1	42025	43969	R	ACA1_272260	complement(join(<42025..42127,42212..42369,42442..42605,42685..42727,42832..42979,43080..43306,43409..43572,43681..>43969))	Acanthamoeba castellanii str. Neff	14925237
ACA1_272270	mRNA	ACA1_272270	NW_004457676.1	44189	48120	R	ACA1_272270	complement(join(<44189..44324,44443..44588,44708..44789,44879..44958,45070..45206,45294..45388,45486..45697,45791..45896,45930..46072,46160..46249,46323..46493,46594..46671,46749..46820,46911..47020,47140..47303,47378..47668,47846..>48120))	Acanthamoeba castellanii str. Neff	14925238
ACA1_272280	mRNA	ACA1_272280	NW_004457676.1	48578	48948	R	ACA1_272280	complement(join(<48578..48761,48851..>48948))	Acanthamoeba castellanii str. Neff	14925239
ACA1_272390	mRNA	ACA1_272390	NW_004457676.1	50482	50646	D	ACA1_272390	<50482..>50646	Acanthamoeba castellanii str. Neff	14925240
ACA1_272500	mRNA	ACA1_272500	NW_004457676.1	51045	51194	D	ACA1_272500	<51045..>51194	Acanthamoeba castellanii str. Neff	14925241
ACA1_272510	mRNA	ACA1_272510	NW_004457676.1	51858	52213	R	ACA1_272510	complement(join(<51858..52041,52101..>52213))	Acanthamoeba castellanii str. Neff	14925242
ACA1_272530	mRNA	ACA1_272530	NW_004457676.1	54559	57568	D	ACA1_272530	join(<54559..54571,54740..54820,54912..55005,55095..55234,55315..55415,55511..55711,55788..55901,55977..56060,56156..56197,56315..56353,56434..56687,56767..57295,57377..>57568)	Acanthamoeba castellanii str. Neff	14925244
ACA1_272540	mRNA	ACA1_272540	NW_004457676.1	57641	58968	R	ACA1_272540	complement(join(<57641..57767,57837..57921,58050..58098,58169..58264,58354..58445,58569..58651,58731..58807,58900..>58968))	Acanthamoeba castellanii str. Neff	14925245
ACA1_272550	mRNA	ACA1_272550	NW_004457676.1	59650	62411	D	ACA1_272550	join(<59650..60147,60248..60523,60599..60805,60879..61014,61133..61305,61400..61499,61781..61869,61947..>62411)	Acanthamoeba castellanii str. Neff	14925246
ACA1_272570	mRNA	ACA1_272570	NW_004457676.1	64410	66496	R	ACA1_272570	complement(join(<64410..64836,64905..>66496))	Acanthamoeba castellanii str. Neff	14925248
ACA1_272580	mRNA	ACA1_272580	NW_004457676.1	67118	69103	R	ACA1_272580	complement(join(<67118..67258,67368..67417,67479..67912,68024..68141,68212..68616,68809..68930,69018..>69103))	Acanthamoeba castellanii str. Neff	14925249
ACA1_272590	mRNA	ACA1_272590	NW_004457676.1	69201	71887	D	ACA1_272590	join(<69201..69263,69345..69726,69835..70009,70070..70331,70405..70528,70578..70749,70829..71031,71091..71196,71273..71355,71403..71599,71675..>71887)	Acanthamoeba castellanii str. Neff	14925250
ACA1_272600	mRNA	ACA1_272600	NW_004457676.1	72553	76932	R	ACA1_272600	complement(join(<72553..73163,73253..73364,73444..75686,75790..76532,76661..>76932))	Acanthamoeba castellanii str. Neff	14925251
ACA1_272610	mRNA	ACA1_272610	NW_004457676.1	77627	79371	D	ACA1_272610	join(<77627..77723,77788..77865,77971..78031,78119..78707,78810..79265,79336..>79371)	Acanthamoeba castellanii str. Neff	14925252
ACA1_272620	mRNA	ACA1_272620	NW_004457676.1	79784	80077	D	ACA1_272620	join(<79784..79913,79974..>80077)	Acanthamoeba castellanii str. Neff	14925253
ACA1_272630	mRNA	ACA1_272630	NW_004457676.1	80203	81242	R	ACA1_272630	complement(join(<80203..80270,80339..80696,80772..80869,81014..>81242))	Acanthamoeba castellanii str. Neff	14925254
ACA1_272640	mRNA	ACA1_272640	NW_004457676.1	81355	82680	R	ACA1_272640	complement(join(<81355..81554,81628..81898,82011..82199,82284..82373,82449..82529,82603..>82680))	Acanthamoeba castellanii str. Neff	14925255
ACA1_272650	mRNA	ACA1_272650	NW_004457676.1	82694	85070	R	ACA1_272650	complement(join(<82694..82843,82987..83409,83502..83608,83689..83862,83942..84028,84125..84455,84496..84702,84753..84869,84927..>85070))	Acanthamoeba castellanii str. Neff	14925256
ACA1_272660	mRNA	ACA1_272660	NW_004457676.1	85290	87493	R	ACA1_272660	complement(join(<85290..85674,85753..85869,86011..86243,86327..86453,86514..86589,86673..86736,86826..86923,87010..87092,87192..87284,87429..>87493))	Acanthamoeba castellanii str. Neff	14925257
ACA1_272670	mRNA	ACA1_272670	NW_004457676.1	87727	88545	D	ACA1_272670	<87727..>88545	Acanthamoeba castellanii str. Neff	14925258
ACA1_272680	mRNA	ACA1_272680	NW_004457676.1	88662	90472	R	ACA1_272680	complement(join(<88662..88781,88870..89039,89160..89352,89423..89587,89677..89791,89885..90061,90137..90255,90380..>90472))	Acanthamoeba castellanii str. Neff	14925259
ACA1_272700	mRNA	ACA1_272700	NW_004457676.1	96252	101868	D	ACA1_272700	join(<96252..96672,96803..96882,96968..97037,97112..97147,97245..97461,97480..97897,98042..98107,98176..98296,98371..98539,98601..98650,98725..98916,99005..99531,99625..99688,99771..99909,100012..100180,100250..100370,100475..100686,100806..101085,101279..101626,101703..101782,101797..>101868)	Acanthamoeba castellanii str. Neff	14925261
ACA1_272710	mRNA	ACA1_272710	NW_004457676.1	101927	104911	D	ACA1_272710	join(<101927..102500,102590..102842,103028..103139,103231..103598,103726..104137,104237..104312,104405..104480,104514..104690,104764..>104911)	Acanthamoeba castellanii str. Neff	14925262
ACA1_272720	mRNA	ACA1_272720	NW_004457676.1	105396	107310	R	ACA1_272720	complement(join(<105396..105581,105657..106053,106136..106366,106466..106609,106695..107023,107130..107203,107265..>107310))	Acanthamoeba castellanii str. Neff	14925263
ACA1_272730	mRNA	ACA1_272730	NW_004457676.1	107706	111495	R	ACA1_272730	complement(join(<107706..107885,107967..108098,108185..108276,108348..109165,109224..109908,109985..110078,110156..110284,110352..110523,110789..110811,110843..110915,110988..111084,111168..111278,111351..>111495))	Acanthamoeba castellanii str. Neff	14925264
ACA1_272740	mRNA	ACA1_272740	NW_004457676.1	112392	115506	D	ACA1_272740	join(<112392..112545,112738..112835,112939..113084,113179..113370,113461..113674,113761..114195,114392..114600,114692..114845,114937..>115506)	Acanthamoeba castellanii str. Neff	14925265
ACA1_272850	mRNA	ACA1_272850	NW_004457676.1	118390	119414	D	ACA1_272850	join(<118390..118437,118522..118710,118836..119106,119215..>119414)	Acanthamoeba castellanii str. Neff	14925266
ACA1_375810	mRNA	ACA1_375810	NW_004457675.1	182	1091	D	ACA1_375810	join(<182..334,446..556,681..796,839..918,1021..>1091)	Acanthamoeba castellanii str. Neff	14925228
ACA1_375820	mRNA	ACA1_375820	NW_004457675.1	1731	4659	D	ACA1_375820	join(<1731..2023,2168..2255,2357..2439,2534..2659,2746..2870,2971..3032,3138..3180,3264..3339,3453..3567,3642..3752,3845..3943,4037..4159,4241..>4659)	Acanthamoeba castellanii str. Neff	14925148
ACA1_375930	mRNA	ACA1_375930	NW_004457675.1	5097	6769	R	ACA1_375930	complement(join(<5097..5196,5272..5491,5592..5713,5835..5984,6062..6697,6752..>6769))	Acanthamoeba castellanii str. Neff	14925149
ACA1_375940	mRNA	ACA1_375940	NW_004457675.1	7580	9679	D	ACA1_375940	join(<7580..7657,8079..8410,8510..8719,8841..9017,9137..9323,9551..>9679)	Acanthamoeba castellanii str. Neff	14925150
ACA1_375950	mRNA	ACA1_375950	NW_004457675.1	9801	11056	R	ACA1_375950	complement(join(<9801..9885,10017..10133,10222..10235,10329..10415,10432..10482,10713..10797,10875..>11056))	Acanthamoeba castellanii str. Neff	14925151
ACA1_375960	mRNA	ACA1_375960	NW_004457675.1	11416	14792	D	ACA1_375960	join(<11416..11681,11804..11899,11997..12261,12373..12637,12653..12693,12778..12948,13045..13318,13421..13724,13865..13966,14086..14208,14321..>14792)	Acanthamoeba castellanii str. Neff	14925152
ACA1_375970	mRNA	ACA1_375970	NW_004457675.1	16215	19284	D	ACA1_375970	join(<16215..16303,16374..16417,16567..16665,16734..16809,16905..16995,17110..17274,17412..17508,17638..17703,17784..17880,17987..18048,18133..18201,18337..18482,18517..18672,18767..18862,18943..19060,19136..>19284)	Acanthamoeba castellanii str. Neff	14925153
ACA1_375980	mRNA	ACA1_375980	NW_004457675.1	19440	20711	D	ACA1_375980	join(<19440..19520,19588..20115,20178..20342,20592..20662,20690..>20711)	Acanthamoeba castellanii str. Neff	14925154
ACA1_375990	mRNA	ACA1_375990	NW_004457675.1	20834	23319	R	ACA1_375990	complement(join(<20834..20908,21001..21120,21259..21370,21457..21614,22062..22389,22501..22666,22761..22859,22942..23065,23281..>23319))	Acanthamoeba castellanii str. Neff	14925155
ACA1_376120	mRNA	ACA1_376120	NW_004457675.1	27518	30613	D	ACA1_376120	join(<27518..27606,27680..27723,27864..27962,28031..28106,28214..28304,28441..28605,28722..28818,28940..29005,29137..29233,29320..29381,29460..29528,29652..29794,29846..30001,30086..30181,30273..30390,30465..>30613)	Acanthamoeba castellanii str. Neff	14925158
ACA1_376130	mRNA	ACA1_376130	NW_004457675.1	30800	32050	D	ACA1_376130	join(<30800..30835,30902..31429,31490..31654,31931..>32050)	Acanthamoeba castellanii str. Neff	14925159
ACA1_376140	mRNA	ACA1_376140	NW_004457675.1	32160	34580	R	ACA1_376140	complement(join(<32160..32234,32323..32442,32577..32688,32760..32917,33360..33687,33789..33954,34029..34127,34212..34335,34542..>34580))	Acanthamoeba castellanii str. Neff	14925160
ACA1_376150	mRNA	ACA1_376150	NW_004457675.1	34938	37304	R	ACA1_376150	complement(join(<34938..35167,35309..35482,35636..35791,35880..35933,36020..36194,36259..36418,36431..36543,36645..36729,36895..37085,37194..>37304))	Acanthamoeba castellanii str. Neff	14925161
ACA1_376170	mRNA	ACA1_376170	NW_004457675.1	40313	43000	R	ACA1_376170	complement(join(<40313..40414,40493..40580,40658..40723,40809..40864,40955..41102,41196..41274,41360..41408,41499..41599,41698..41757,41859..42185,42327..42410,42532..42623,42721..42843,42915..>43000))	Acanthamoeba castellanii str. Neff	14925163
ACA1_376180	mRNA	ACA1_376180	NW_004457675.1	43202	45014	R	ACA1_376180	complement(join(<43202..43974,44040..44633,44804..>45014))	Acanthamoeba castellanii str. Neff	14925164
ACA1_376190	mRNA	ACA1_376190	NW_004457675.1	45437	46479	D	ACA1_376190	join(<45437..45726,45812..46148,46209..46345,46413..>46479)	Acanthamoeba castellanii str. Neff	14925165
ACA1_376200	mRNA	ACA1_376200	NW_004457675.1	46795	50860	D	ACA1_376200	join(<46795..48825,48884..49066,49305..49470,49534..49645,49683..49963,50042..50220,50305..50554,50628..>50860)	Acanthamoeba castellanii str. Neff	14925166
ACA1_376210	mRNA	ACA1_376210	NW_004457675.1	51638	56364	R	ACA1_376210	complement(join(<51638..51826,51910..52212,52351..52617,52742..52849,53010..53568,53695..53852,53957..54110,54291..54352,54490..54650,54743..54812,54918..54986,55085..55246,55366..>56364))	Acanthamoeba castellanii str. Neff	14925167
ACA1_376220	mRNA	ACA1_376220	NW_004457675.1	56970	58279	R	ACA1_376220	complement(join(<56970..57000,57147..57232,57318..57420,57589..57759,57918..>58279))	Acanthamoeba castellanii str. Neff	14925168
ACA1_376230	mRNA	ACA1_376230	NW_004457675.1	58373	61361	R	ACA1_376230	complement(join(<58373..58456,58556..58692,58772..58979,59106..59368,59445..59723,59800..60013,60103..60261,60365..60460,60565..60756,60894..61083,61258..>61361))	Acanthamoeba castellanii str. Neff	14925169
ACA1_376240	mRNA	ACA1_376240	NW_004457675.1	61811	63207	D	ACA1_376240	join(<61811..61905,61988..62099,62209..62595,62688..62876,62950..>63207)	Acanthamoeba castellanii str. Neff	14925170
ACA1_376250	mRNA	ACA1_376250	NW_004457675.1	63542	63954	R	ACA1_376250	complement(join(<63542..63631,63712..>63954))	Acanthamoeba castellanii str. Neff	14925171
ACA1_376260	mRNA	ACA1_376260	NW_004457675.1	64892	66324	D	ACA1_376260	join(<64892..65461,65535..65762,65905..66067,66170..>66324)	Acanthamoeba castellanii str. Neff	14925172
ACA1_376270	mRNA	ACA1_376270	NW_004457675.1	66870	70088	D	ACA1_376270	join(<66870..67076,67202..67320,67413..67553,67703..67757,67831..67910,68094..68267,68346..68457,68524..68625,68744..68900,69032..69161,69401..69456,69467..69647,69741..69847,69945..69998,70066..>70088)	Acanthamoeba castellanii str. Neff	14925173
ACA1_376290	mRNA	ACA1_376290	NW_004457675.1	71091	71998	R	ACA1_376290	complement(join(<71091..71766,71871..>71998))	Acanthamoeba castellanii str. Neff	14925175
ACA1_376300	mRNA	ACA1_376300	NW_004457675.1	72112	73893	D	ACA1_376300	join(<72112..72292,72562..72641,72753..72882,73013..73133,73285..73528,73639..>73893)	Acanthamoeba castellanii str. Neff	14925176
ACA1_376430	mRNA	ACA1_376430	NW_004457675.1	82654	83567	R	ACA1_376430	complement(join(<82654..82802,82864..82890,83036..83144,83547..>83567))	Acanthamoeba castellanii str. Neff	14925179
ACA1_376440	mRNA	ACA1_376440	NW_004457675.1	83810	84451	D	ACA1_376440	join(<83810..84093,84115..>84451)	Acanthamoeba castellanii str. Neff	14925180
ACA1_376450	mRNA	ACA1_376450	NW_004457675.1	84727	85955	R	ACA1_376450	complement(join(<84727..84972,85094..85425,85498..85791,85901..>85955))	Acanthamoeba castellanii str. Neff	14925181
ACA1_376460	mRNA	ACA1_376460	NW_004457675.1	86043	86545	D	ACA1_376460	join(<86043..86198,86303..>86545)	Acanthamoeba castellanii str. Neff	14925182
ACA1_376470	mRNA	ACA1_376470	NW_004457675.1	87360	88200	R	ACA1_376470	complement(join(<87360..87391,87487..87578,87659..87726,87809..87866,87943..88000,88092..>88200))	Acanthamoeba castellanii str. Neff	14925183
ACA1_376480	mRNA	ACA1_376480	NW_004457675.1	88341	89425	R	ACA1_376480	complement(join(<88341..88390,88480..88574,88750..88830,88996..89081,89185..89257,89347..>89425))	Acanthamoeba castellanii str. Neff	14925184
ACA1_376490	mRNA	ACA1_376490	NW_004457675.1	90032	91170	R	ACA1_376490	complement(join(<90032..90232,90350..90440,90524..90600,90704..90956,91025..>91170))	Acanthamoeba castellanii str. Neff	14925185
ACA1_376500	mRNA	ACA1_376500	NW_004457675.1	91736	94092	D	ACA1_376500	join(<91736..91807,92050..92164,92415..92519,92596..92667,92767..92929,93012..93104,93212..93314,93424..93456,93531..93702,93810..93921,94032..>94092)	Acanthamoeba castellanii str. Neff	14925186
ACA1_376510	mRNA	ACA1_376510	NW_004457675.1	94250	94944	R	ACA1_376510	complement(join(<94250..94383,94453..94623,94917..>94944))	Acanthamoeba castellanii str. Neff	14925187
ACA1_376520	mRNA	ACA1_376520	NW_004457675.1	95276	97028	D	ACA1_376520	join(<95276..95305,95386..95506,95517..96093,96175..96286,96375..96578,96699..>97028)	Acanthamoeba castellanii str. Neff	14925188
ACA1_376530	mRNA	ACA1_376530	NW_004457675.1	97559	99926	D	ACA1_376530	join(<97559..97658,97949..98157,98195..98359,98487..98935,99140..99251,99365..99571,99684..>99926)	Acanthamoeba castellanii str. Neff	14925189
ACA1_376540	mRNA	ACA1_376540	NW_004457675.1	101206	103685	R	ACA1_376540	complement(join(<101206..101310,101406..101497,101578..101645,101745..101802,101884..101941,102033..102117,102224..103515,103584..>103685))	Acanthamoeba castellanii str. Neff	14925190
ACA1_376550	mRNA	ACA1_376550	NW_004457675.1	104071	105421	D	ACA1_376550	join(<104071..104291,104392..104512,104664..104998,105079..105220,105326..>105421)	Acanthamoeba castellanii str. Neff	14925191
ACA1_376560	mRNA	ACA1_376560	NW_004457675.1	106170	108128	D	ACA1_376560	join(<106170..106280,106437..107011,107114..107233,107347..107515,107601..107719,107852..>108128)	Acanthamoeba castellanii str. Neff	14925192
ACA1_376570	mRNA	ACA1_376570	NW_004457675.1	108218	109780	R	ACA1_376570	complement(<108218..>109780)	Acanthamoeba castellanii str. Neff	14925193
ACA1_376580	mRNA	ACA1_376580	NW_004457675.1	110035	111177	D	ACA1_376580	join(<110035..110089,110161..110235,110306..110355,110428..110478,110560..110626,110702..110760,110891..110999,111098..>111177)	Acanthamoeba castellanii str. Neff	14925194
ACA1_376590	mRNA	ACA1_376590	NW_004457675.1	111693	114541	D	ACA1_376590	join(<111693..111765,111921..112330,112452..112572,112707..112892,112976..113088,113212..113572,113652..113811,113941..114169,114284..>114541)	Acanthamoeba castellanii str. Neff	14925195
ACA1_376600	mRNA	ACA1_376600	NW_004457675.1	114648	119828	R	ACA1_376600	complement(join(<114648..114773,114898..115029,115167..115355,115486..115569,115698..115786,115884..115962,116071..116131,116194..116897,117071..117533,117654..117994,118107..118306,118378..118467,118568..118796,118867..118970,119055..119182,119286..119389,119471..119613,119702..>119828))	Acanthamoeba castellanii str. Neff	14925196
ACA1_376610	mRNA	ACA1_376610	NW_004457675.1	120790	129833	D	ACA1_376610	join(<120790..121330,121454..121564,121627..121743,121826..122071,122158..122393,122565..122742,122825..122998,123087..123434,123527..123651,123761..123979,124058..124174,124256..124430,124573..127054,127137..127289,127406..128805,128930..129065,129161..>129833)	Acanthamoeba castellanii str. Neff	14925197
ACA1_376620	mRNA	ACA1_376620	NW_004457675.1	130384	132507	D	ACA1_376620	join(<130384..130624,130745..>132507)	Acanthamoeba castellanii str. Neff	14925198
ACA1_376630	mRNA	ACA1_376630	NW_004457675.1	133122	133710	R	ACA1_376630	complement(join(<133122..133202,133225..133386,133473..133538,133576..>133710))	Acanthamoeba castellanii str. Neff	14925199
ACA1_376650	mRNA	ACA1_376650	NW_004457675.1	136334	137567	D	ACA1_376650	join(<136334..136537,136784..137103,137201..>137567)	Acanthamoeba castellanii str. Neff	14925201
ACA1_376660	mRNA	ACA1_376660	NW_004457675.1	137868	138274	R	ACA1_376660	complement(join(<137868..137928,138010..138094,138163..>138274))	Acanthamoeba castellanii str. Neff	14925202
ACA1_376670	mRNA	ACA1_376670	NW_004457675.1	138435	139262	R	ACA1_376670	complement(join(<138435..138496,138589..138707,138778..138910,138991..139093,139185..>139262))	Acanthamoeba castellanii str. Neff	14925203
ACA1_376680	mRNA	ACA1_376680	NW_004457675.1	139375	140798	D	ACA1_376680	join(<139375..139516,139637..139688,139876..139954,140084..140168,140274..140366,140463..140557,140652..>140798)	Acanthamoeba castellanii str. Neff	14925204
ACA1_376690	mRNA	ACA1_376690	NW_004457675.1	140931	141720	R	ACA1_376690	complement(join(<140931..141237,141330..141469,141622..>141720))	Acanthamoeba castellanii str. Neff	14925205
ACA1_376700	mRNA	ACA1_376700	NW_004457675.1	142112	142444	R	ACA1_376700	complement(<142112..>142444)	Acanthamoeba castellanii str. Neff	14925206
ACA1_376710	mRNA	ACA1_376710	NW_004457675.1	142762	145440	D	ACA1_376710	join(<142762..144795,144866..145072,145136..145327,145360..>145440)	Acanthamoeba castellanii str. Neff	14925207
ACA1_376720	mRNA	ACA1_376720	NW_004457675.1	145719	146667	R	ACA1_376720	complement(join(<145719..145825,145948..145989,146112..146182,146272..146379,146470..146535,146651..>146667))	Acanthamoeba castellanii str. Neff	14925208
ACA1_376730	mRNA	ACA1_376730	NW_004457675.1	146995	148764	R	ACA1_376730	complement(join(<146995..147078,147184..147951,148023..148142,148237..148598,148689..>148764))	Acanthamoeba castellanii str. Neff	14925209
ACA1_376740	mRNA	ACA1_376740	NW_004457675.1	149537	151021	D	ACA1_376740	join(<149537..149705,149805..>151021)	Acanthamoeba castellanii str. Neff	14925210
ACA1_376760	mRNA	ACA1_376760	NW_004457675.1	158255	164718	D	ACA1_376760	join(<158255..158266,158336..158470,158545..158821,158915..159236,159306..159655,159737..159771,159876..160196,160309..160444,160551..160857,160873..160943,161051..161200,161273..161382,161460..161576,161640..161736,161830..162106,162182..162913,162990..163294,163373..163846,164027..164232,164293..>164718)	Acanthamoeba castellanii str. Neff	14925212
ACA1_376770	mRNA	ACA1_376770	NW_004457675.1	165219	165629	R	ACA1_376770	complement(join(<165219..165443,165552..>165629))	Acanthamoeba castellanii str. Neff	14925213
ACA1_376780	mRNA	ACA1_376780	NW_004457675.1	166706	167063	D	ACA1_376780	join(<166706..166814,166897..>167063)	Acanthamoeba castellanii str. Neff	14925214
ACA1_376790	mRNA	ACA1_376790	NW_004457675.1	167190	170589	D	ACA1_376790	join(<167190..167306,167373..167458,167539..167712,167793..168170,168279..169014,169122..169730,169855..169961,170119..170421,170505..>170589)	Acanthamoeba castellanii str. Neff	14925215
ACA1_376800	mRNA	ACA1_376800	NW_004457675.1	171117	173455	D	ACA1_376800	join(<171117..171368,171454..171645,171730..171985,172079..172270,172350..172483,172686..172785,172844..172987,173094..>173455)	Acanthamoeba castellanii str. Neff	14925216
ACA1_376810	mRNA	ACA1_376810	NW_004457675.1	173888	175211	D	ACA1_376810	join(<173888..174229,174241..174375,174463..174530,174621..174759,174872..175005,175118..>175211)	Acanthamoeba castellanii str. Neff	14925217
ACA1_376820	mRNA	ACA1_376820	NW_004457675.1	175212	176076	R	ACA1_376820	complement(join(<175212..175381,175562..175675,175794..>176076))	Acanthamoeba castellanii str. Neff	14925218
ACA1_376930	mRNA	ACA1_376930	NW_004457675.1	177141	178714	R	ACA1_376930	complement(join(<177141..177360,177657..177748,177839..178154,178251..>178714))	Acanthamoeba castellanii str. Neff	14925219
ACA1_376940	mRNA	ACA1_376940	NW_004457675.1	179706	184528	D	ACA1_376940	join(<179706..180042,180110..180258,180334..180391,180476..180663,180751..181125,181139..181948,182257..182590,182673..182824,182890..182938,183018..183202,183308..>184528)	Acanthamoeba castellanii str. Neff	14925220
ACA1_376950	mRNA	ACA1_376950	NW_004457675.1	184818	187238	D	ACA1_376950	join(<184818..184890,184958..185006,185092..185198,185282..185380,185452..185534,185685..185804,185898..186004,186096..186226,186335..186443,186669..186762,186818..187022,187114..>187238)	Acanthamoeba castellanii str. Neff	14925221
ACA1_376960	mRNA	ACA1_376960	NW_004457675.1	187359	189127	R	ACA1_376960	complement(join(<187359..187424,187507..187610,187720..187836,187915..188041,188143..188277,188416..188489,188584..188656,188766..188803,188971..>189127))	Acanthamoeba castellanii str. Neff	14925222
ACA1_376970	mRNA	ACA1_376970	NW_004457675.1	189657	190028	R	ACA1_376970	complement(<189657..>190028)	Acanthamoeba castellanii str. Neff	14925223
ACA1_376980	mRNA	ACA1_376980	NW_004457675.1	191001	191628	R	ACA1_376980	complement(join(<191001..191185,191316..>191628))	Acanthamoeba castellanii str. Neff	14925224
ACA1_376990	mRNA	ACA1_376990	NW_004457675.1	192290	193688	D	ACA1_376990	join(<192290..192359,192412..193278,193352..193453,193540..>193688)	Acanthamoeba castellanii str. Neff	14925225
ACA1_377000	mRNA	ACA1_377000	NW_004457675.1	193774	195809	R	ACA1_377000	complement(join(<193774..193832,193920..194046,194141..195256,195337..195544,195775..>195809))	Acanthamoeba castellanii str. Neff	14925226
ACA1_377010	mRNA	ACA1_377010	NW_004457675.1	196031	198001	D	ACA1_377010	join(<196031..196218,196289..196495,196612..196675,196788..196846,196932..197412,197516..197722,197798..>198001)	Acanthamoeba castellanii str. Neff	14925227
ACA1_152400	mRNA	ACA1_152400	NW_004457674.1	1432	3018	R	ACA1_152400	complement(join(<1432..1455,1591..1677,1788..2147,2225..2768,2933..>3018))	Acanthamoeba castellanii str. Neff	14925147
ACA1_152410	mRNA	ACA1_152410	NW_004457674.1	3777	4172	R	ACA1_152410	complement(<3777..>4172)	Acanthamoeba castellanii str. Neff	14925084
ACA1_152420	mRNA	ACA1_152420	NW_004457674.1	5457	6020	R	ACA1_152420	complement(<5457..>6020)	Acanthamoeba castellanii str. Neff	14925085
ACA1_152430	mRNA	ACA1_152430	NW_004457674.1	6609	9135	R	ACA1_152430	complement(join(<6609..6647,6782..6926,7037..7212,8219..8266,8376..8447,8538..8664,8765..8862,9001..>9135))	Acanthamoeba castellanii str. Neff	14925086
ACA1_152540	mRNA	ACA1_152540	NW_004457674.1	9316	9675	R	ACA1_152540	complement(join(<9316..9386,9459..>9675))	Acanthamoeba castellanii str. Neff	14925087
ACA1_152650	mRNA	ACA1_152650	NW_004457674.1	12035	14028	R	ACA1_152650	complement(join(<12035..12412,12563..12690,12772..13033,13112..13293,13671..13725,13832..13930,13999..>14028))	Acanthamoeba castellanii str. Neff	14925088
ACA1_152660	mRNA	ACA1_152660	NW_004457674.1	15015	15634	D	ACA1_152660	join(<15015..15349,15568..>15634)	Acanthamoeba castellanii str. Neff	14925089
ACA1_152770	mRNA	ACA1_152770	NW_004457674.1	15909	16079	D	ACA1_152770	<15909..>16079	Acanthamoeba castellanii str. Neff	14925090
ACA1_152880	mRNA	ACA1_152880	NW_004457674.1	18085	18436	R	ACA1_152880	complement(join(<18085..18213,18368..>18436))	Acanthamoeba castellanii str. Neff	14925091
ACA1_152890	mRNA	ACA1_152890	NW_004457674.1	20955	23298	R	ACA1_152890	complement(join(<20955..21080,21119..21163,21339..21991,22104..>23298))	Acanthamoeba castellanii str. Neff	14925092
ACA1_152900	mRNA	ACA1_152900	NW_004457674.1	23804	25425	R	ACA1_152900	complement(join(<23804..23905,23977..24122,24250..24328,24444..24545,24617..24727,24850..24947,25016..25052,25131..25232,25327..>25425))	Acanthamoeba castellanii str. Neff	14925093
ACA1_152910	mRNA	ACA1_152910	NW_004457674.1	27156	28707	D	ACA1_152910	join(<27156..27183,27266..27416,27527..27655,27812..27915,28022..28402,28538..>28707)	Acanthamoeba castellanii str. Neff	14925094
ACA1_152920	mRNA	ACA1_152920	NW_004457674.1	28861	32419	R	ACA1_152920	complement(join(<28861..30365,30450..30537,30609..30887,30997..31400,31490..31583,31695..31739,31946..31955,32112..>32419))	Acanthamoeba castellanii str. Neff	14925095
ACA1_152930	mRNA	ACA1_152930	NW_004457674.1	33905	38702	R	ACA1_152930	complement(join(<33905..34079,34181..34320,34446..34560,34683..34858,34928..35027,35226..35647,35795..35862,35967..36435,36537..36638,36736..37279,37399..37455,37526..37604,37710..37923,38026..38113,38228..38286,38376..38450,38532..>38702))	Acanthamoeba castellanii str. Neff	14925096
ACA1_152940	mRNA	ACA1_152940	NW_004457674.1	38986	39782	D	ACA1_152940	join(<38986..39109,39233..39383,39495..39602,39701..>39782)	Acanthamoeba castellanii str. Neff	14925097
ACA1_152950	mRNA	ACA1_152950	NW_004457674.1	40151	40810	R	ACA1_152950	complement(join(<40151..40291,40368..40493,40556..40695,40789..>40810))	Acanthamoeba castellanii str. Neff	14925098
ACA1_152960	mRNA	ACA1_152960	NW_004457674.1	41019	42956	D	ACA1_152960	join(<41019..41058,41167..41237,41305..41370,41459..41676,41746..42009,42290..42776,42852..>42956)	Acanthamoeba castellanii str. Neff	14925099
ACA1_152970	mRNA	ACA1_152970	NW_004457674.1	43151	44287	R	ACA1_152970	complement(join(<43151..43273,43394..43513,43624..43703,43834..43960,44048..44118,44200..>44287))	Acanthamoeba castellanii str. Neff	14925100
ACA1_152980	mRNA	ACA1_152980	NW_004457674.1	45747	47458	D	ACA1_152980	join(<45747..46053,46262..46342,46450..46540,46663..46787,46919..47004,47114..>47458)	Acanthamoeba castellanii str. Neff	14925101
ACA1_152990	mRNA	ACA1_152990	NW_004457674.1	48134	49113	R	ACA1_152990	complement(join(<48134..48152,48201..48292,48411..48538,48608..48647,48744..48891,49004..>49113))	Acanthamoeba castellanii str. Neff	14925102
ACA1_153000	mRNA	ACA1_153000	NW_004457674.1	51141	52657	D	ACA1_153000	join(<51141..51447,51632..51712,51816..51906,52068..52192,52327..52443,52518..>52657)	Acanthamoeba castellanii str. Neff	14925103
ACA1_153010	mRNA	ACA1_153010	NW_004457674.1	53226	54401	R	ACA1_153010	complement(join(<53226..53403,53517..53608,53688..53815,53878..53917,54011..54158,54262..>54401))	Acanthamoeba castellanii str. Neff	14925104
ACA1_153020	mRNA	ACA1_153020	NW_004457674.1	55504	58144	R	ACA1_153020	complement(join(<55504..55554,55644..55725,55831..55936,56071..56193,56320..56430,56527..56763,56846..56941,57219..57337,57468..57508,57542..57598,57673..57760,58065..>58144))	Acanthamoeba castellanii str. Neff	14925105
ACA1_153030	mRNA	ACA1_153030	NW_004457674.1	62581	63676	R	ACA1_153030	complement(join(<62581..62674,62743..62820,62923..63028,63086..63199,63259..>63676))	Acanthamoeba castellanii str. Neff	14925106
ACA1_153040	mRNA	ACA1_153040	NW_004457674.1	64203	66603	D	ACA1_153040	join(<64203..64296,64404..64571,64640..64763,64847..65000,65068..65357,65461..65551,65645..65806,65932..66044,66114..66374,66480..>66603)	Acanthamoeba castellanii str. Neff	14925107
ACA1_153050	mRNA	ACA1_153050	NW_004457674.1	68170	68996	R	ACA1_153050	complement(join(<68170..68246,68335..68392,68473..68832,68940..>68996))	Acanthamoeba castellanii str. Neff	14925108
ACA1_153060	mRNA	ACA1_153060	NW_004457674.1	69970	76114	R	ACA1_153060	complement(join(<69970..70046,70135..70192,70441..70511,70633..70781,70878..70990,71110..71260,71360..71463,71579..71704,71801..72001,72075..72329,72418..72519,72707..72772,72873..72962,73260..73314,73413..73507,73648..73740,73864..73978,74067..74233,74331..74438,74532..74601,74761..74899,75038..75199,75332..75507,75632..75793,76068..>76114))	Acanthamoeba castellanii str. Neff	14925109
ACA1_153070	mRNA	ACA1_153070	NW_004457674.1	76551	78134	D	ACA1_153070	join(<76551..76601,76649..76972,77140..77243,77350..77558,77869..>78134)	Acanthamoeba castellanii str. Neff	14925110
ACA1_153080	mRNA	ACA1_153080	NW_004457674.1	78675	79952	D	ACA1_153080	join(<78675..79263,79477..>79952)	Acanthamoeba castellanii str. Neff	14925111
ACA1_153190	mRNA	ACA1_153190	NW_004457674.1	81616	82584	D	ACA1_153190	join(<81616..82062,82184..82311,82410..>82584)	Acanthamoeba castellanii str. Neff	14925112
ACA1_153200	mRNA	ACA1_153200	NW_004457674.1	82988	86651	D	ACA1_153200	join(<82988..83069,83145..83197,83462..83617,83900..84035,84097..84161,84298..84371,84448..84587,84757..84832,84907..84984,85066..85126,85213..85325,85414..85478,85614..85726,85878..85948,86370..86503,86587..>86651)	Acanthamoeba castellanii str. Neff	14925113
ACA1_153210	mRNA	ACA1_153210	NW_004457674.1	88677	90449	R	ACA1_153210	complement(join(<88677..88850,88934..89014,89136..89249,89342..89439,89554..89657,89766..89924,90014..90097,90163..90197,90291..>90449))	Acanthamoeba castellanii str. Neff	14925114
ACA1_153220	mRNA	ACA1_153220	NW_004457674.1	90529	91034	R	ACA1_153220	complement(join(<90529..90696,90816..>91034))	Acanthamoeba castellanii str. Neff	14925115
ACA1_153230	mRNA	ACA1_153230	NW_004457674.1	91073	91471	R	ACA1_153230	complement(join(<91073..91243,91337..>91471))	Acanthamoeba castellanii str. Neff	14925116
ACA1_153240	mRNA	ACA1_153240	NW_004457674.1	91620	95172	R	ACA1_153240	complement(join(<91620..91655,91745..91927,92071..92204,92429..92588,92721..92830,92924..92991,93069..93201,93300..93398,93555..93630,93728..93890,93981..94064,94162..94373,94417..94543,94619..94647,94731..94781,94905..95046,95126..>95172))	Acanthamoeba castellanii str. Neff	14925117
ACA1_153250	mRNA	ACA1_153250	NW_004457674.1	95966	96865	R	ACA1_153250	complement(<95966..>96865)	Acanthamoeba castellanii str. Neff	14925118
ACA1_153260	mRNA	ACA1_153260	NW_004457674.1	97403	98204	R	ACA1_153260	complement(join(<97403..97856,97921..>98204))	Acanthamoeba castellanii str. Neff	14925119
ACA1_153270	mRNA	ACA1_153270	NW_004457674.1	98651	99332	R	ACA1_153270	complement(join(<98651..98833,98960..99048,99179..>99332))	Acanthamoeba castellanii str. Neff	14925120
ACA1_153280	mRNA	ACA1_153280	NW_004457674.1	99704	100914	R	ACA1_153280	complement(join(<99704..99809,99879..100027,100123..100249,100339..100434,100550..100796,100827..>100914))	Acanthamoeba castellanii str. Neff	14925121
ACA1_153290	mRNA	ACA1_153290	NW_004457674.1	101551	104861	D	ACA1_153290	join(<101551..101647,101869..101967,102090..102195,102270..102363,102584..102865,102936..>104861)	Acanthamoeba castellanii str. Neff	14925122
ACA1_153300	mRNA	ACA1_153300	NW_004457674.1	105162	107031	D	ACA1_153300	join(<105162..105564,105645..105882,105979..106162,106688..106725,106746..106879,106967..>107031)	Acanthamoeba castellanii str. Neff	14925123
ACA1_153520	mRNA	ACA1_153520	NW_004457674.1	114388	116725	R	ACA1_153520	complement(join(<114388..114553,114739..114924,115031..115645,115733..115894,115994..116093,116158..116522,116664..>116725))	Acanthamoeba castellanii str. Neff	14925125
ACA1_153530	mRNA	ACA1_153530	NW_004457674.1	116829	117734	R	ACA1_153530	complement(<116829..>117734)	Acanthamoeba castellanii str. Neff	14925126
ACA1_153540	mRNA	ACA1_153540	NW_004457674.1	118267	120884	R	ACA1_153540	complement(join(<118267..118360,118450..118652,118743..118969,119043..119170,119235..119398,119477..119635,119711..120143,120243..120402,120498..120644,120851..>120884))	Acanthamoeba castellanii str. Neff	14925127
ACA1_153550	mRNA	ACA1_153550	NW_004457674.1	121065	123534	D	ACA1_153550	join(<121065..121122,121230..121370,121461..121579,121692..121773,121887..122095,122205..122297,122427..122590,122688..122776,122895..123005,123079..123143,123237..123332,123406..>123534)	Acanthamoeba castellanii str. Neff	14925128
ACA1_153560	mRNA	ACA1_153560	NW_004457674.1	123620	124558	R	ACA1_153560	complement(join(<123620..123762,123871..>124558))	Acanthamoeba castellanii str. Neff	14925129
ACA1_153570	mRNA	ACA1_153570	NW_004457674.1	124675	129810	R	ACA1_153570	complement(join(<124675..124871,124969..125106,125174..125246,125392..125476,125573..125681,125807..125956,126043..126170,126280..126432,126513..126594,126735..126860,126977..127087,127349..127432,127521..127597,127837..127916,128057..128151,128246..128365,128485..128592,128675..128788,128848..128960,129131..129184,129261..129328,129392..129555,129702..>129810))	Acanthamoeba castellanii str. Neff	14925130
ACA1_153580	mRNA	ACA1_153580	NW_004457674.1	130219	130629	R	ACA1_153580	complement(<130219..>130629)	Acanthamoeba castellanii str. Neff	14925131
ACA1_153590	mRNA	ACA1_153590	NW_004457674.1	131120	133278	R	ACA1_153590	complement(join(<131120..131237,131337..131458,131551..131648,131810..132264,132334..132428,132549..132688,132777..133040,133227..>133278))	Acanthamoeba castellanii str. Neff	14925132
ACA1_153600	mRNA	ACA1_153600	NW_004457674.1	135472	138533	R	ACA1_153600	complement(join(<135472..135599,135960..136063,136180..136279,136382..136505,136596..136652,136751..136823,136915..137045,137168..137228,137310..137403,137528..137627,137722..137829,137933..138043,138150..138394,138503..>138533))	Acanthamoeba castellanii str. Neff	14925133
ACA1_153610	mRNA	ACA1_153610	NW_004457674.1	139012	140139	D	ACA1_153610	join(<139012..139477,139568..139704,139782..139922,140056..>140139)	Acanthamoeba castellanii str. Neff	14925134
ACA1_153620	mRNA	ACA1_153620	NW_004457674.1	140586	141700	R	ACA1_153620	complement(join(<140586..140869,140977..>141700))	Acanthamoeba castellanii str. Neff	14925135
ACA1_153630	mRNA	ACA1_153630	NW_004457674.1	142465	143933	D	ACA1_153630	join(<142465..142534,142633..142691,142767..142841,142923..143009,143101..143199,143264..143407,143499..143658,143758..>143933)	Acanthamoeba castellanii str. Neff	14925136
ACA1_153640	mRNA	ACA1_153640	NW_004457674.1	144288	148742	D	ACA1_153640	join(<144288..144291,144546..144632,144727..144857,144939..145027,145127..145238,145294..145594,145708..145802,145916..146161,146281..146397,146498..146648,146750..146769,146810..146882,147049..147216,147293..147370,147562..147719,147843..147941,148017..148220,148298..148409,148510..>148742)	Acanthamoeba castellanii str. Neff	14925137
ACA1_153650	mRNA	ACA1_153650	NW_004457674.1	149006	149438	D	ACA1_153650	join(<149006..149191,149262..>149438)	Acanthamoeba castellanii str. Neff	14925138
ACA1_153660	mRNA	ACA1_153660	NW_004457674.1	149669	150001	R	ACA1_153660	complement(<149669..>150001)	Acanthamoeba castellanii str. Neff	14925139
ACA1_153670	mRNA	ACA1_153670	NW_004457674.1	150194	152790	R	ACA1_153670	complement(join(<150194..150269,150373..150448,150516..150669,150750..150820,150949..151019,151106..151527,151660..152241,152376..152644,152715..>152790))	Acanthamoeba castellanii str. Neff	14925140
ACA1_153680	mRNA	ACA1_153680	NW_004457674.1	153372	155448	R	ACA1_153680	complement(join(<153372..153573,153656..153721,153807..153916,154115..154241,154298..154388,154475..154593,154674..154817,154965..155061,155143..155227,155344..>155448))	Acanthamoeba castellanii str. Neff	14925141
ACA1_153690	mRNA	ACA1_153690	NW_004457674.1	155744	156134	R	ACA1_153690	complement(join(<155744..155885,156010..>156134))	Acanthamoeba castellanii str. Neff	14925142
ACA1_153700	mRNA	ACA1_153700	NW_004457674.1	156860	163320	R	ACA1_153700	complement(join(<156860..157092,157210..157240,157319..157516,157616..157719,157786..158218,158333..158798,158883..158967,159040..159184,159268..159331,159409..159490,159591..159694,159770..159878,159936..159999,160081..160221,160300..160724,160794..>163320))	Acanthamoeba castellanii str. Neff	14925143
ACA1_153710	mRNA	ACA1_153710	NW_004457674.1	163734	165931	R	ACA1_153710	complement(join(<163734..165051,165405..165419,165669..>165931))	Acanthamoeba castellanii str. Neff	14925144
ACA1_153720	mRNA	ACA1_153720	NW_004457674.1	167590	170971	R	ACA1_153720	complement(join(<167590..169214,169389..169448,169594..169678,169820..169930,170065..170135,170506..>170971))	Acanthamoeba castellanii str. Neff	14925145
ACA1_153730	mRNA	ACA1_153730	NW_004457674.1	171884	176779	D	ACA1_153730	join(<171884..171976,172157..172384,172496..172573,172635..173838,173979..174091,174104..174221,174335..174499,174579..175080,175174..175310,175403..175472,175547..175845,175955..176110,176336..176510,176587..>176779)	Acanthamoeba castellanii str. Neff	14925146
ACA1_019130	mRNA	ACA1_019130	NW_004457673.1	9	663	R	ACA1_019130	complement(join(<9..61,164..476,628..>663))	Acanthamoeba castellanii str. Neff	14925083
ACA1_019140	mRNA	ACA1_019140	NW_004457673.1	884	3128	R	ACA1_019140	complement(join(<884..998,1102..1232,1250..1386,1467..1570,1692..1992,2110..2227,2552..2662,2755..2863,2959..>3128))	Acanthamoeba castellanii str. Neff	14925068
ACA1_019150	mRNA	ACA1_019150	NW_004457673.1	4128	5904	D	ACA1_019150	join(<4128..4368,4516..4725,4809..4930,5096..5269,5345..5659,5755..>5904)	Acanthamoeba castellanii str. Neff	14925069
ACA1_019160	mRNA	ACA1_019160	NW_004457673.1	6124	7128	R	ACA1_019160	complement(<6124..>7128)	Acanthamoeba castellanii str. Neff	14925070
ACA1_019170	mRNA	ACA1_019170	NW_004457673.1	8047	8564	R	ACA1_019170	complement(join(<8047..8169,8235..>8564))	Acanthamoeba castellanii str. Neff	14925071
ACA1_019180	mRNA	ACA1_019180	NW_004457673.1	8865	10932	R	ACA1_019180	complement(join(<8865..9229,9404..9422,9633..9788,9895..10347,10422..10502,10564..10642,10722..10827,10893..>10932))	Acanthamoeba castellanii str. Neff	14925072
ACA1_019190	mRNA	ACA1_019190	NW_004457673.1	11264	13520	D	ACA1_019190	join(<11264..11361,11441..11571,11715..11825,12013..12136,12219..12301,12432..12522,12650..12672,12763..12876,12967..13110,13244..13296,13380..>13520)	Acanthamoeba castellanii str. Neff	14925073
ACA1_019200	mRNA	ACA1_019200	NW_004457673.1	13614	15138	R	ACA1_019200	complement(join(<13614..13735,13815..13913,13982..14039,14123..14263,14351..14442,14518..14758,14905..>15138))	Acanthamoeba castellanii str. Neff	14925074
ACA1_019210	mRNA	ACA1_019210	NW_004457673.1	15227	15927	R	ACA1_019210	complement(join(<15227..15400,15637..15720,15823..>15927))	Acanthamoeba castellanii str. Neff	14925075
ACA1_019220	mRNA	ACA1_019220	NW_004457673.1	16092	19871	D	ACA1_019220	join(<16092..16316,18679..18942,19052..19204,19326..19592,19674..>19871)	Acanthamoeba castellanii str. Neff	14925076
ACA1_019330	mRNA	ACA1_019330	NW_004457673.1	20214	21648	D	ACA1_019330	join(<20214..20412,20634..20780,20882..21043,21102..21151,21238..21350,21450..>21648)	Acanthamoeba castellanii str. Neff	14925077
ACA1_019340	mRNA	ACA1_019340	NW_004457673.1	22410	27292	R	ACA1_019340	complement(join(<22410..22656,22803..23186,23333..23432,23514..23769,23888..24054,24148..24399,24492..24638,24729..25208,25306..25809,25921..26041,26141..26415,26489..26795,26891..26990,27150..>27292))	Acanthamoeba castellanii str. Neff	14925078
ACA1_019350	mRNA	ACA1_019350	NW_004457673.1	28251	32045	R	ACA1_019350	complement(join(<28251..28355,28438..28549,28605..28684,28776..28923,29021..29143,29230..29427,29510..29589,29730..30044,30109..30247,30418..30484,30590..30725,30816..31255,31318..31374,31500..31531,31620..31748,31846..>32045))	Acanthamoeba castellanii str. Neff	14925079
ACA1_019360	mRNA	ACA1_019360	NW_004457673.1	32170	34703	D	ACA1_019360	join(<32170..32245,32378..32472,32551..32598,32704..32817,32967..33043,33192..33322,33442..33611,33631..33699,33780..33887,33967..34062,34142..34196,34300..34446,34552..>34703)	Acanthamoeba castellanii str. Neff	14925080
ACA1_019370	mRNA	ACA1_019370	NW_004457673.1	34850	36470	D	ACA1_019370	join(<34850..35157,35250..35344,35470..35662,35747..35868,35944..36117,36204..36379,36456..>36470)	Acanthamoeba castellanii str. Neff	14925081
ACA1_019380	mRNA	ACA1_019380	NW_004457673.1	36891	40847	R	ACA1_019380	complement(join(<36891..36995,37086..37193,37296..37934,38081..38274,38404..38514,38614..38728,38817..39244,39344..39533,39637..39813,39910..40032,40142..40398,40497..40613,40727..>40847))	Acanthamoeba castellanii str. Neff	14925082
ACA1_013490	mRNA	ACA1_013490	NW_004457672.1	85	1752	D	ACA1_013490	join(<85..111,225..315,385..498,576..655,754..831,913..999,1063..1136,1219..1323,1386..>1752)	Acanthamoeba castellanii str. Neff	14925067
ACA1_013500	mRNA	ACA1_013500	NW_004457672.1	1787	2276	R	ACA1_013500	complement(join(<1787..2022,2119..2200,2271..>2276))	Acanthamoeba castellanii str. Neff	14925058
ACA1_013610	mRNA	ACA1_013610	NW_004457672.1	6236	12669	R	ACA1_013610	complement(join(<6236..6320,6401..6568,6661..6745,6876..6989,7081..7273,7359..7473,7570..7761,7937..8081,8210..8301,8347..8703,8775..10140,10226..10758,10996..11087,11159..11370,11465..11809,11907..12081,12182..12347,12391..12552,12608..>12669))	Acanthamoeba castellanii str. Neff	14925059
ACA1_013620	mRNA	ACA1_013620	NW_004457672.1	13466	14589	R	ACA1_013620	complement(join(<13466..13545,13646..13743,13835..13954,14017..14086,14159..14283,14385..14480,14558..>14589))	Acanthamoeba castellanii str. Neff	14925060
ACA1_013630	mRNA	ACA1_013630	NW_004457672.1	14878	15823	R	ACA1_013630	complement(join(<14878..14940,15014..15141,15207..15335,15399..15506,15583..>15823))	Acanthamoeba castellanii str. Neff	14925061
ACA1_013640	mRNA	ACA1_013640	NW_004457672.1	16077	18172	R	ACA1_013640	complement(join(<16077..16118,16159..16391,16455..16504,16581..16691,16773..16888,16971..17045,17140..17346,17448..17555,17637..17872,17949..18023,18154..>18172))	Acanthamoeba castellanii str. Neff	14925062
ACA1_013650	mRNA	ACA1_013650	NW_004457672.1	18369	18716	D	ACA1_013650	join(<18369..18459,18525..18583,18636..>18716)	Acanthamoeba castellanii str. Neff	14925063
ACA1_013660	mRNA	ACA1_013660	NW_004457672.1	18762	19651	D	ACA1_013660	join(<18762..18881,19009..19196,19216..>19651)	Acanthamoeba castellanii str. Neff	14925064
ACA1_013670	mRNA	ACA1_013670	NW_004457672.1	19851	20208	D	ACA1_013670	join(<19851..19865,19949..20021,20084..>20208)	Acanthamoeba castellanii str. Neff	14925065
ACA1_013680	mRNA	ACA1_013680	NW_004457672.1	20440	21492	D	ACA1_013680	<20440..>21492	Acanthamoeba castellanii str. Neff	14925066
ACA1_142940	mRNA	ACA1_142940	NW_004457671.1	230	4256	R	ACA1_142940	complement(join(<230..498,589..640,708..751,909..1011,1096..1155,1285..1393,1555..1704,1849..1971,2070..2133,2222..2377,2466..2547,2776..2837,2948..3086,3161..3257,3334..4019,4143..>4256))	Acanthamoeba castellanii str. Neff	14925056
ACA1_143050	mRNA	ACA1_143050	NW_004457671.1	9819	10643	R	ACA1_143050	complement(join(<9819..10107,10192..10382,10497..>10643))	Acanthamoeba castellanii str. Neff	14925057
ACA1_143060	mRNA	ACA1_143060	NW_004457671.1	12073	13314	D	ACA1_143060	<12073..>13314	Acanthamoeba castellanii str. Neff	14924965
ACA1_143070	mRNA	ACA1_143070	NW_004457671.1	13753	20026	D	ACA1_143070	join(<13753..13917,14015..14095,14213..14249,14362..14574,14830..14898,15002..15102,15611..15661,15775..16049,16878..16901,16996..17072,17153..17239,17390..17534,17636..17753,17812..17841,17964..18062,18164..18274,18409..18499,18593..18704,18797..18889,19033..19156,19272..19391,19469..19576,19687..19855,19953..>20026)	Acanthamoeba castellanii str. Neff	14924966
ACA1_143280	mRNA	ACA1_143280	NW_004457671.1	20307	20876	R	ACA1_143280	complement(join(<20307..20426,20511..20603,20724..>20876))	Acanthamoeba castellanii str. Neff	14924967
ACA1_143290	mRNA	ACA1_143290	NW_004457671.1	21136	22616	R	ACA1_143290	complement(join(<21136..21969,22098..22370,22515..>22616))	Acanthamoeba castellanii str. Neff	14924968
ACA1_143300	mRNA	ACA1_143300	NW_004457671.1	22995	24517	R	ACA1_143300	complement(join(<22995..23358,23457..23632,23735..23803,23930..24049,24152..24232,24374..>24517))	Acanthamoeba castellanii str. Neff	14924969
ACA1_143310	mRNA	ACA1_143310	NW_004457671.1	24890	25213	D	ACA1_143310	join(<24890..24991,25079..>25213)	Acanthamoeba castellanii str. Neff	14924970
ACA1_143320	mRNA	ACA1_143320	NW_004457671.1	25432	26328	R	ACA1_143320	complement(join(<25432..25625,25718..25864,25928..26037,26171..>26328))	Acanthamoeba castellanii str. Neff	14924971
ACA1_143330	mRNA	ACA1_143330	NW_004457671.1	26640	28231	D	ACA1_143330	join(<26640..26741,26966..27238,27440..>28231)	Acanthamoeba castellanii str. Neff	14924972
ACA1_143440	mRNA	ACA1_143440	NW_004457671.1	32012	32503	D	ACA1_143440	<32012..>32503	Acanthamoeba castellanii str. Neff	14924973
ACA1_143550	mRNA	ACA1_143550	NW_004457671.1	34826	36776	D	ACA1_143550	join(<34826..34882,34987..35185,35279..35358,35498..35779,35905..36021,36137..36276,36385..36526,36657..>36776)	Acanthamoeba castellanii str. Neff	14924974
ACA1_143560	mRNA	ACA1_143560	NW_004457671.1	36863	37128	D	ACA1_143560	join(<36863..36933,36966..>37128)	Acanthamoeba castellanii str. Neff	14924975
ACA1_143570	mRNA	ACA1_143570	NW_004457671.1	37561	38609	D	ACA1_143570	join(<37561..37905,37989..>38609)	Acanthamoeba castellanii str. Neff	14924976
ACA1_143580	mRNA	ACA1_143580	NW_004457671.1	38657	46384	R	ACA1_143580	complement(join(<38657..39349,39457..40189,40266..40489,40577..40765,40863..41036,41136..41216,41322..41490,41597..41716,41803..42032,42125..42235,42320..42438,42533..42728,42869..42967,43120..43203,43267..43377,43497..43592,43702..44499,44607..44724,44802..44956,45086..45229,45409..45658,45776..46112,46300..>46384))	Acanthamoeba castellanii str. Neff	14924977
ACA1_143590	mRNA	ACA1_143590	NW_004457671.1	46921	48639	D	ACA1_143590	join(<46921..47049,47112..47141,47224..47258,47299..47408,47478..47559,47638..48411,48504..>48639)	Acanthamoeba castellanii str. Neff	14924978
ACA1_143600	mRNA	ACA1_143600	NW_004457671.1	48867	49332	D	ACA1_143600	join(<48867..48984,49072..49172,49249..>49332)	Acanthamoeba castellanii str. Neff	14924979
ACA1_143610	mRNA	ACA1_143610	NW_004457671.1	49417	50373	R	ACA1_143610	complement(join(<49417..49666,49774..49892,50041..50127,50236..>50373))	Acanthamoeba castellanii str. Neff	14924980
ACA1_143620	mRNA	ACA1_143620	NW_004457671.1	50720	54955	D	ACA1_143620	join(<50720..51907,52005..52112,52204..52339,52444..52674,52720..52842,52940..53039,53141..53226,53411..53873,53981..54079,54157..54307,54461..54655,54785..>54955)	Acanthamoeba castellanii str. Neff	14924981
ACA1_143630	mRNA	ACA1_143630	NW_004457671.1	55081	56142	R	ACA1_143630	complement(<55081..>56142)	Acanthamoeba castellanii str. Neff	14924982
ACA1_143640	mRNA	ACA1_143640	NW_004457671.1	56796	58021	D	ACA1_143640	join(<56796..57190,57300..57382,57509..57675,57797..>58021)	Acanthamoeba castellanii str. Neff	14924983
ACA1_143650	mRNA	ACA1_143650	NW_004457671.1	58249	60617	D	ACA1_143650	join(<58249..58300,58376..58516,58839..58895,59034..59089,59245..59358,59469..59607,59743..59896,59982..60088,60289..60399,60469..>60617)	Acanthamoeba castellanii str. Neff	14924984
ACA1_143660	mRNA	ACA1_143660	NW_004457671.1	61582	66861	R	ACA1_143660	complement(join(<61582..61725,61916..62042,62168..62526,62631..62739,62854..62969,63088..63245,63361..63473,63677..63724,63848..63930,64020..64228,64312..64426,64552..64660,64768..64866,64956..65149,65236..65368,65531..65601,65740..65865,65981..66070,66101..66181,66265..66375,66481..66624,66739..>66861))	Acanthamoeba castellanii str. Neff	14924985
ACA1_143670	mRNA	ACA1_143670	NW_004457671.1	67264	67817	R	ACA1_143670	complement(join(<67264..67636,67771..>67817))	Acanthamoeba castellanii str. Neff	14924986
ACA1_143680	mRNA	ACA1_143680	NW_004457671.1	67981	70862	D	ACA1_143680	join(<67981..69111,69219..69453,69544..69798,69894..70038,70141..70342,70434..>70862)	Acanthamoeba castellanii str. Neff	14924987
ACA1_143690	mRNA	ACA1_143690	NW_004457671.1	72499	74999	R	ACA1_143690	complement(join(<72499..72699,72894..73065,73236..73457,73540..73642,73732..73830,73945..74149,74250..74496,74605..74749,74831..74909,74949..>74999))	Acanthamoeba castellanii str. Neff	14924988
ACA1_143700	mRNA	ACA1_143700	NW_004457671.1	75094	78343	D	ACA1_143700	join(<75094..75151,75251..75385,75488..75573,75715..75850,75938..76192,76278..76405,76550..76623,76973..77036,77124..77176,77290..77377,77477..77564,77646..77742,77830..77962,78103..78118,78198..>78343)	Acanthamoeba castellanii str. Neff	14924989
ACA1_143710	mRNA	ACA1_143710	NW_004457671.1	78838	79766	R	ACA1_143710	complement(join(<78838..79011,79162..79257,79407..79484,79626..>79766))	Acanthamoeba castellanii str. Neff	14924990
ACA1_143720	mRNA	ACA1_143720	NW_004457671.1	80235	82572	D	ACA1_143720	join(<80235..80368,80520..81194,81301..81456,81570..81678,81840..82040,82135..>82572)	Acanthamoeba castellanii str. Neff	14924991
ACA1_143730	mRNA	ACA1_143730	NW_004457671.1	83051	84072	R	ACA1_143730	complement(join(<83051..83823,83859..83872,84035..>84072))	Acanthamoeba castellanii str. Neff	14924992
ACA1_143740	mRNA	ACA1_143740	NW_004457671.1	84529	87586	R	ACA1_143740	complement(join(<84529..84672,84764..84955,85087..85256,85393..85465,85541..85687,85770..85993,86057..86797,86969..87122,87289..87426,87506..>87586))	Acanthamoeba castellanii str. Neff	14924993
ACA1_143750	mRNA	ACA1_143750	NW_004457671.1	87875	88783	D	ACA1_143750	join(<87875..87990,88087..>88783)	Acanthamoeba castellanii str. Neff	14924994
ACA1_143760	mRNA	ACA1_143760	NW_004457671.1	88942	91884	R	ACA1_143760	complement(join(<88942..89270,89373..89465,89549..90343,90409..90574,90649..91761,91825..>91884))	Acanthamoeba castellanii str. Neff	14924995
ACA1_143770	mRNA	ACA1_143770	NW_004457671.1	93521	94499	D	ACA1_143770	join(<93521..93568,93780..93852,93911..93955,94035..94120,94181..94219,94281..94350,94465..>94499)	Acanthamoeba castellanii str. Neff	14924996
ACA1_143780	mRNA	ACA1_143780	NW_004457671.1	95653	97993	D	ACA1_143780	join(<95653..95664,95844..95973,96067..96210,96314..96434,96522..96661,96742..96891,96978..97124,97222..97416,97506..97637,97721..97869,97961..>97993)	Acanthamoeba castellanii str. Neff	14924997
ACA1_143790	mRNA	ACA1_143790	NW_004457671.1	98287	99366	D	ACA1_143790	join(<98287..98370,98495..98590,98675..98778,98896..99020,99119..>99366)	Acanthamoeba castellanii str. Neff	14924998
ACA1_143800	mRNA	ACA1_143800	NW_004457671.1	99508	100413	R	ACA1_143800	complement(join(<99508..99780,99896..100002,100153..100202,100268..>100413))	Acanthamoeba castellanii str. Neff	14924999
ACA1_143810	mRNA	ACA1_143810	NW_004457671.1	102485	102813	R	ACA1_143810	complement(join(<102485..102701,102791..>102813))	Acanthamoeba castellanii str. Neff	14925000
ACA1_143920	mRNA	ACA1_143920	NW_004457671.1	105776	106828	D	ACA1_143920	join(<105776..105946,106020..106210,106300..>106828)	Acanthamoeba castellanii str. Neff	14925001
ACA1_143930	mRNA	ACA1_143930	NW_004457671.1	107169	109330	D	ACA1_143930	join(<107169..107280,107350..107548,107686..107901,107971..108070,108143..108247,108259..108360,108479..108527,108630..108838,108965..109030,109124..>109330)	Acanthamoeba castellanii str. Neff	14925002
ACA1_143940	mRNA	ACA1_143940	NW_004457671.1	109466	113220	R	ACA1_143940	complement(join(<109466..109576,109694..109794,109911..110006,110071..110164,110273..110488,110611..110742,110863..111196,111291..111487,111603..111760,111854..111941,112053..112194,112290..112447,112560..113091,113171..>113220))	Acanthamoeba castellanii str. Neff	14925003
ACA1_143950	mRNA	ACA1_143950	NW_004457671.1	113561	115761	R	ACA1_143950	complement(join(<113561..113653,113805..115440,115733..>115761))	Acanthamoeba castellanii str. Neff	14925004
ACA1_143960	mRNA	ACA1_143960	NW_004457671.1	116474	116958	D	ACA1_143960	join(<116474..116569,116671..>116958)	Acanthamoeba castellanii str. Neff	14925005
ACA1_143970	mRNA	ACA1_143970	NW_004457671.1	117295	118977	D	ACA1_143970	join(<117295..117565,117660..117826,117943..118089,118164..118343,118565..118842,118905..>118977)	Acanthamoeba castellanii str. Neff	14925006
ACA1_143980	mRNA	ACA1_143980	NW_004457671.1	119047	120407	R	ACA1_143980	complement(join(<119047..119140,119213..119373,119469..119798,119884..119988,120048..120067,120212..120284,120366..>120407))	Acanthamoeba castellanii str. Neff	14925007
ACA1_143990	mRNA	ACA1_143990	NW_004457671.1	120539	121783	R	ACA1_143990	complement(join(<120539..120644,120782..120927,121000..121041,121120..121216,121309..121408,121496..121626,121710..>121783))	Acanthamoeba castellanii str. Neff	14925008
ACA1_144000	mRNA	ACA1_144000	NW_004457671.1	122471	126091	D	ACA1_144000	join(<122471..122643,122733..122794,122894..122958,123030..123119,123193..123294,123382..123489,123603..123710,123799..123972,124246..124407,124477..124602,124686..124854,124950..125968,126053..>126091)	Acanthamoeba castellanii str. Neff	14925009
ACA1_144020	mRNA	ACA1_144020	NW_004457671.1	131827	134313	R	ACA1_144020	complement(join(<131827..132165,132294..132508,132619..132720,132835..132929,133026..133180,133257..133347,133437..133873,134116..>134313))	Acanthamoeba castellanii str. Neff	14925011
ACA1_144030	mRNA	ACA1_144030	NW_004457671.1	134550	135839	D	ACA1_144030	join(<134550..134638,134763..134894,134980..135095,135191..135505,135598..>135839)	Acanthamoeba castellanii str. Neff	14925012
ACA1_144040	mRNA	ACA1_144040	NW_004457671.1	136356	136640	R	ACA1_144040	complement(<136356..>136640)	Acanthamoeba castellanii str. Neff	14925013
ACA1_144050	mRNA	ACA1_144050	NW_004457671.1	136831	139649	R	ACA1_144050	complement(join(<136831..137037,137140..137314,137443..137625,137752..137901,137985..138515,138587..138715,138860..138977,139293..139443,139596..>139649))	Acanthamoeba castellanii str. Neff	14925014
ACA1_144060	mRNA	ACA1_144060	NW_004457671.1	139937	141949	D	ACA1_144060	join(<139937..139996,140069..140362,140519..140560,140768..141027,141222..141291,141320..141390,141485..141573,141681..>141949)	Acanthamoeba castellanii str. Neff	14925015
ACA1_144070	mRNA	ACA1_144070	NW_004457671.1	142102	144704	R	ACA1_144070	complement(join(<142102..142267,142359..142464,142610..142774,142898..143003,143212..143311,143409..143646,143703..143845,143950..144006,144071..144318,144387..>144704))	Acanthamoeba castellanii str. Neff	14925016
ACA1_144080	mRNA	ACA1_144080	NW_004457671.1	145547	148632	D	ACA1_144080	join(<145547..145736,145842..146456,146557..146696,146815..147006,147118..147235,147323..147431,147518..147575,147641..147763,147890..147956,148166..148308,148408..>148632)	Acanthamoeba castellanii str. Neff	14925017
ACA1_144090	mRNA	ACA1_144090	NW_004457671.1	148664	150539	R	ACA1_144090	complement(join(<148664..148736,148795..149057,149131..149201,149244..149726,149837..149972,150053..150153,150251..150365,150450..>150539))	Acanthamoeba castellanii str. Neff	14925018
ACA1_144100	mRNA	ACA1_144100	NW_004457671.1	150751	151763	R	ACA1_144100	complement(join(<150751..150917,151011..151076,151205..>151763))	Acanthamoeba castellanii str. Neff	14925019
ACA1_144110	mRNA	ACA1_144110	NW_004457671.1	151977	154005	D	ACA1_144110	join(<151977..152250,152344..152423,152514..152594,152669..152750,152834..152923,153020..153112,153202..153283,153490..153587,153661..153742,153837..153861,153931..>154005)	Acanthamoeba castellanii str. Neff	14925020
ACA1_144120	mRNA	ACA1_144120	NW_004457671.1	154320	157253	D	ACA1_144120	join(<154320..154442,154560..154651,154768..154894,155331..155430,155520..155562,155673..155785,155891..155964,156030..156294,156328..>157253)	Acanthamoeba castellanii str. Neff	14925021
ACA1_144130	mRNA	ACA1_144130	NW_004457671.1	157447	158055	D	ACA1_144130	<157447..>158055	Acanthamoeba castellanii str. Neff	14925022
ACA1_144140	mRNA	ACA1_144140	NW_004457671.1	158101	158475	R	ACA1_144140	complement(<158101..>158475)	Acanthamoeba castellanii str. Neff	14925023
ACA1_144150	mRNA	ACA1_144150	NW_004457671.1	158592	158852	R	ACA1_144150	complement(<158592..>158852)	Acanthamoeba castellanii str. Neff	14925024
ACA1_144160	mRNA	ACA1_144160	NW_004457671.1	160752	164113	R	ACA1_144160	complement(join(<160752..162757,162851..163070,163188..163675,163803..163946,164083..>164113))	Acanthamoeba castellanii str. Neff	14925025
ACA1_144170	mRNA	ACA1_144170	NW_004457671.1	164661	166181	D	ACA1_144170	join(<164661..164685,164753..164823,165117..165305,165387..165488,165591..>166181)	Acanthamoeba castellanii str. Neff	14925026
ACA1_144180	mRNA	ACA1_144180	NW_004457671.1	166449	166898	D	ACA1_144180	<166449..>166898	Acanthamoeba castellanii str. Neff	14925027
ACA1_144190	mRNA	ACA1_144190	NW_004457671.1	167240	169358	D	ACA1_144190	join(<167240..167812,167953..168032,168149..168245,168342..168423,168512..168575,168670..168791,168925..>169358)	Acanthamoeba castellanii str. Neff	14925028
ACA1_144200	mRNA	ACA1_144200	NW_004457671.1	169524	171712	D	ACA1_144200	join(<169524..169652,169793..169867,170035..170140,170254..170745,170842..170918,170996..171081,171161..171252,171336..>171712)	Acanthamoeba castellanii str. Neff	14925029
ACA1_144210	mRNA	ACA1_144210	NW_004457671.1	171952	172876	R	ACA1_144210	complement(join(<171952..172007,172109..172212,172319..172483,172602..172679,172776..>172876))	Acanthamoeba castellanii str. Neff	14925030
ACA1_144220	mRNA	ACA1_144220	NW_004457671.1	173083	174995	R	ACA1_144220	complement(join(<173083..173961,174090..174191,174323..174375,174478..174675,174827..>174995))	Acanthamoeba castellanii str. Neff	14925031
ACA1_144230	mRNA	ACA1_144230	NW_004457671.1	175413	180678	D	ACA1_144230	join(<175413..175532,175556..175591,175671..175773,175947..175986,176291..176481,176574..176795,176872..177011,177095..177406,177460..177600,177683..177914,178098..178304,178412..178495,178595..178656,178772..178930,179032..179133,179252..179324,179401..179499,179594..179639,179718..179835,179968..180059,180169..180275,180354..180480,180591..>180678)	Acanthamoeba castellanii str. Neff	14925032
ACA1_144240	mRNA	ACA1_144240	NW_004457671.1	180815	181501	D	ACA1_144240	<180815..>181501	Acanthamoeba castellanii str. Neff	14925033
ACA1_144250	mRNA	ACA1_144250	NW_004457671.1	181679	187088	R	ACA1_144250	complement(join(<181679..181853,181951..182075,182152..182277,182386..183039,183121..183200,183307..183524,183609..183702,183792..183842,183933..184000,184241..184353,184496..184573,184679..184769,184871..184968,185077..185166,185241..185352,185456..185569,185707..185835,185984..186066,186246..186347,186495..>187088))	Acanthamoeba castellanii str. Neff	14925034
ACA1_144260	mRNA	ACA1_144260	NW_004457671.1	187922	188182	D	ACA1_144260	<187922..>188182	Acanthamoeba castellanii str. Neff	14925035
ACA1_144270	mRNA	ACA1_144270	NW_004457671.1	188823	193985	D	ACA1_144270	join(<188823..188930,189097..189198,189349..189462,189602..189744,189839..189937,190068..190195,190292..190398,190584..190701,190810..191041,191160..191267,191376..191490,191568..191693,191830..192080,192181..192472,192590..192682,192771..192877,193022..193127,193194..193297,193434..193545,193767..193868,193980..>193985)	Acanthamoeba castellanii str. Neff	14925036
ACA1_144280	mRNA	ACA1_144280	NW_004457671.1	194365	195276	D	ACA1_144280	<194365..>195276	Acanthamoeba castellanii str. Neff	14925037
ACA1_144290	mRNA	ACA1_144290	NW_004457671.1	195656	196989	D	ACA1_144290	join(<195656..195748,195949..196088,196241..196467,196631..>196989)	Acanthamoeba castellanii str. Neff	14925038
ACA1_144300	mRNA	ACA1_144300	NW_004457671.1	197151	199276	R	ACA1_144300	complement(join(<197151..197239,197315..197578,197696..197868,197989..198125,198258..198282,198431..198495,198627..198671,198802..198894,199013..>199276))	Acanthamoeba castellanii str. Neff	14925039
ACA1_144310	mRNA	ACA1_144310	NW_004457671.1	199466	202075	D	ACA1_144310	join(<199466..199492,199594..199666,199746..199838,199960..200030,200120..200192,200388..200451,200559..200602,200675..200817,200937..201056,201152..201285,201390..201466,201550..201613,201718..201784,201867..201917,201998..>202075)	Acanthamoeba castellanii str. Neff	14925040
ACA1_144320	mRNA	ACA1_144320	NW_004457671.1	202715	204597	D	ACA1_144320	join(<202715..202760,202838..202863,202996..203141,203224..203419,203503..203655,203750..203893,203970..204152,204215..204331,204436..>204597)	Acanthamoeba castellanii str. Neff	14925041
ACA1_144330	mRNA	ACA1_144330	NW_004457671.1	204716	209442	R	ACA1_144330	complement(join(<204716..204831,204915..205044,205131..205238,205319..205383,205686..205765,205912..205985,206203..206272,206456..206534,206657..206747,206892..206963,207085..207246,207389..207497,207567..207750,207841..209004,209241..>209442))	Acanthamoeba castellanii str. Neff	14925042
ACA1_144340	mRNA	ACA1_144340	NW_004457671.1	210063	212496	D	ACA1_144340	join(<210063..210236,210417..210487,210660..210762,210870..211275,211417..211518,211599..211812,211897..211994,212093..>212496)	Acanthamoeba castellanii str. Neff	14925043
ACA1_144350	mRNA	ACA1_144350	NW_004457671.1	212570	214134	D	ACA1_144350	join(<212570..212705,212788..212889,212980..213014,213164..213275,213362..213427,213477..213705,213780..213861,213937..>214134)	Acanthamoeba castellanii str. Neff	14925044
ACA1_144360	mRNA	ACA1_144360	NW_004457671.1	214725	215744	D	ACA1_144360	join(<214725..214827,215000..215192,215303..215515,215591..>215744)	Acanthamoeba castellanii str. Neff	14925045
ACA1_144370	mRNA	ACA1_144370	NW_004457671.1	215991	218148	D	ACA1_144370	join(<215991..216027,216143..216394,216476..217226,217354..217459,217528..217795,217871..>218148)	Acanthamoeba castellanii str. Neff	14925046
ACA1_144380	mRNA	ACA1_144380	NW_004457671.1	219905	226392	D	ACA1_144380	join(<219905..220085,220294..220553,220664..220828,220966..221287,221383..221582,221723..222028,222153..222315,222429..222650,222765..222926,223043..223440,223530..223706,223818..223986,224118..224261,224418..224741,224941..225150,225241..225450,225597..225874,226038..226149,226259..>226392)	Acanthamoeba castellanii str. Neff	14925047
ACA1_144390	mRNA	ACA1_144390	NW_004457671.1	226540	228495	R	ACA1_144390	complement(join(<226540..226797,226944..227249,227380..227459,227631..227671,227817..228077,228368..>228495))	Acanthamoeba castellanii str. Neff	14925048
ACA1_144400	mRNA	ACA1_144400	NW_004457671.1	228627	234304	R	ACA1_144400	complement(join(<228627..228833,229001..229145,229307..229492,229628..229797,229921..230072,230253..230397,230532..230768,230971..231139,231303..231510,231632..231926,232113..232213,232356..232614,232762..232908,233137..233284,233554..233736,234024..>234304))	Acanthamoeba castellanii str. Neff	14925049
ACA1_144420	mRNA	ACA1_144420	NW_004457671.1	238346	239933	D	ACA1_144420	join(<238346..238479,238590..238797,239000..239111,239502..239638,239784..>239933)	Acanthamoeba castellanii str. Neff	14925051
ACA1_144430	mRNA	ACA1_144430	NW_004457671.1	240032	243251	R	ACA1_144430	complement(join(<240032..240217,240385..240637,240733..241010,241170..241307,241486..241656,241804..241994,242160..242274,242334..242516,242793..242953,243050..243175,243224..>243251))	Acanthamoeba castellanii str. Neff	14925052
ACA1_144440	mRNA	ACA1_144440	NW_004457671.1	243463	246622	D	ACA1_144440	join(<243463..243553,243629..243805,243954..244330,244448..244650,244860..245211,245381..>246622)	Acanthamoeba castellanii str. Neff	14925053
ACA1_144450	mRNA	ACA1_144450	NW_004457671.1	246964	250705	D	ACA1_144450	join(<246964..247042,247113..247232,247410..247624,247758..248555,248689..248796,248981..249214,249516..249671,249843..250149,250275..>250705)	Acanthamoeba castellanii str. Neff	14925054
ACA1_144460	mRNA	ACA1_144460	NW_004457671.1	254572	255675	D	ACA1_144460	join(<254572..254688,254764..254815,254926..255127,255573..>255675)	Acanthamoeba castellanii str. Neff	14925055
ACA1_025200	mRNA	ACA1_025200	NW_004457670.1	1490	2776	D	ACA1_025200	join(<1490..1660,1744..1919,2024..2321,2470..2650,2742..>2776)	Acanthamoeba castellanii str. Neff	14924964
ACA1_025410	mRNA	ACA1_025410	NW_004457670.1	12506	16263	D	ACA1_025410	join(<12506..12621,12653..13193,13262..13378,13477..13635,13722..14072,14141..14306,14378..15463,15562..15867,15959..>16263)	Acanthamoeba castellanii str. Neff	14924962
ACA1_074390	mRNA	ACA1_074390	NW_004457669.1	1	90	R	ACA1_074390	complement(<1..>90)	Acanthamoeba castellanii str. Neff	14924961
ACA1_074400	mRNA	ACA1_074400	NW_004457669.1	364	1769	R	ACA1_074400	complement(join(<364..537,623..850,929..1128,1219..1542,1619..>1769))	Acanthamoeba castellanii str. Neff	14924870
ACA1_074410	mRNA	ACA1_074410	NW_004457669.1	2122	4099	D	ACA1_074410	join(<2122..2378,2520..2632,2747..2854,2955..2986,3097..3264,3327..3430,3562..3692,3781..3894,3978..>4099)	Acanthamoeba castellanii str. Neff	14924891
ACA1_074420	mRNA	ACA1_074420	NW_004457669.1	4226	8946	R	ACA1_074420	complement(join(<4226..4397,4478..4577,4670..4787,4883..4959,5037..5114,5208..5409,5515..5682,5780..5914,6019..6182,6261..6417,6506..6608,6698..6926,7009..7846,7929..8212,8258..8416,8727..>8946))	Acanthamoeba castellanii str. Neff	14924892
ACA1_074430	mRNA	ACA1_074430	NW_004457669.1	9833	11575	D	ACA1_074430	join(<9833..9992,10079..10189,10269..10394,10485..>11575)	Acanthamoeba castellanii str. Neff	14924893
ACA1_074440	mRNA	ACA1_074440	NW_004457669.1	12025	13378	R	ACA1_074440	complement(join(<12025..12802,12938..13037,13115..13203,13266..>13378))	Acanthamoeba castellanii str. Neff	14924894
ACA1_074450	mRNA	ACA1_074450	NW_004457669.1	14458	17051	R	ACA1_074450	complement(join(<14458..14535,14622..14721,14809..14903,14990..15069,15155..15280,15387..15490,15591..15713,15852..15947,16050..16192,16282..16361,16451..16693,16767..16855,16957..>17051))	Acanthamoeba castellanii str. Neff	14924895
ACA1_074460	mRNA	ACA1_074460	NW_004457669.1	17306	21474	D	ACA1_074460	join(<17306..17370,17449..17570,17633..18340,18539..18565,18652..18855,18951..19220,19315..19499,19592..19768,19855..20019,20103..20589,20685..20786,20865..21070,21154..21276,21358..>21474)	Acanthamoeba castellanii str. Neff	14924896
ACA1_074470	mRNA	ACA1_074470	NW_004457669.1	22089	23218	R	ACA1_074470	complement(join(<22089..22753,22834..>23218))	Acanthamoeba castellanii str. Neff	14924897
ACA1_074480	mRNA	ACA1_074480	NW_004457669.1	23290	23890	D	ACA1_074480	join(<23290..23377,23590..23693,23774..>23890)	Acanthamoeba castellanii str. Neff	14924898
ACA1_074490	mRNA	ACA1_074490	NW_004457669.1	24108	24829	D	ACA1_074490	join(<24108..24360,24441..24514,24527..24598,24683..>24829)	Acanthamoeba castellanii str. Neff	14924899
ACA1_074500	mRNA	ACA1_074500	NW_004457669.1	24836	25453	D	ACA1_074500	join(<24836..25043,25110..25184,25269..>25453)	Acanthamoeba castellanii str. Neff	14924900
ACA1_074510	mRNA	ACA1_074510	NW_004457669.1	25550	28052	D	ACA1_074510	join(<25550..25718,25798..25906,25973..26161,26259..26807,26904..26969,27061..27135,27156..27361,27508..27653,27742..27805,27874..>28052)	Acanthamoeba castellanii str. Neff	14924901
ACA1_074520	mRNA	ACA1_074520	NW_004457669.1	28152	31096	D	ACA1_074520	join(<28152..28303,28411..28607,28749..28892,29039..29214,29298..29376,29455..29563,29637..29764,29873..30026,30108..30180,30210..30410,30486..30608,30860..>31096)	Acanthamoeba castellanii str. Neff	14924902
ACA1_074530	mRNA	ACA1_074530	NW_004457669.1	31172	32003	R	ACA1_074530	complement(join(<31172..31315,31408..31500,31614..>32003))	Acanthamoeba castellanii str. Neff	14924871
ACA1_074540	mRNA	ACA1_074540	NW_004457669.1	32208	39609	D	ACA1_074540	join(<32208..32516,32645..32751,32900..32930,33018..33070,33136..33253,33377..36131,36217..36377,36448..36510,36567..36893,37127..38041,38116..38488,38576..38680,38789..38946,39057..39166,39254..39400,39483..>39609)	Acanthamoeba castellanii str. Neff	14924872
ACA1_074550	mRNA	ACA1_074550	NW_004457669.1	41931	45910	R	ACA1_074550	complement(join(<41931..42050,42123..43049,43120..43476,43489..43930,44015..44237,44363..44530,44664..44802,44937..45157,45180..45397,45445..45632,45743..>45910))	Acanthamoeba castellanii str. Neff	14924873
ACA1_074560	mRNA	ACA1_074560	NW_004457669.1	46062	46577	D	ACA1_074560	<46062..>46577	Acanthamoeba castellanii str. Neff	14924874
ACA1_074570	mRNA	ACA1_074570	NW_004457669.1	46660	47145	R	ACA1_074570	complement(<46660..>47145)	Acanthamoeba castellanii str. Neff	14924875
ACA1_074580	mRNA	ACA1_074580	NW_004457669.1	47631	48466	D	ACA1_074580	join(<47631..47823,47962..48041,48096..48307,48391..>48466)	Acanthamoeba castellanii str. Neff	14924876
ACA1_074590	mRNA	ACA1_074590	NW_004457669.1	49800	50274	R	ACA1_074590	complement(join(<49800..49872,49942..50089,50181..>50274))	Acanthamoeba castellanii str. Neff	14924877
ACA1_074600	mRNA	ACA1_074600	NW_004457669.1	50465	53221	R	ACA1_074600	complement(join(<50465..50532,50603..50697,50840..50923,51037..51162,51244..51352,51426..51639,51733..51844,51941..52072,52161..52429,52523..52895,53130..>53221))	Acanthamoeba castellanii str. Neff	14924878
ACA1_074610	mRNA	ACA1_074610	NW_004457669.1	53324	54071	R	ACA1_074610	complement(join(<53324..53355,53460..53616,53707..53786,53861..>54071))	Acanthamoeba castellanii str. Neff	14924879
ACA1_074620	mRNA	ACA1_074620	NW_004457669.1	54465	54850	R	ACA1_074620	complement(join(<54465..54563,54650..>54850))	Acanthamoeba castellanii str. Neff	14924880
ACA1_074630	mRNA	ACA1_074630	NW_004457669.1	55148	55838	R	ACA1_074630	complement(join(<55148..55344,55413..55520,55588..55707,55766..>55838))	Acanthamoeba castellanii str. Neff	14924881
ACA1_074640	mRNA	ACA1_074640	NW_004457669.1	56084	57208	D	ACA1_074640	<56084..>57208	Acanthamoeba castellanii str. Neff	14924882
ACA1_074650	mRNA	ACA1_074650	NW_004457669.1	57572	59143	R	ACA1_074650	complement(join(<57572..58087,58240..58473,58607..58743,58864..>59143))	Acanthamoeba castellanii str. Neff	14924883
ACA1_074660	mRNA	ACA1_074660	NW_004457669.1	59869	60518	D	ACA1_074660	join(<59869..59965,60042..60129,60212..>60518)	Acanthamoeba castellanii str. Neff	14924884
ACA1_074670	mRNA	ACA1_074670	NW_004457669.1	60615	62228	R	ACA1_074670	complement(join(<60615..60687,60759..60808,60880..60960,61042..61101,61237..61358,61431..61534,61608..61686,61789..61886,61958..62033,62105..>62228))	Acanthamoeba castellanii str. Neff	14924885
ACA1_074680	mRNA	ACA1_074680	NW_004457669.1	62385	63454	D	ACA1_074680	join(<62385..62454,62575..62642,62721..63227,63338..>63454)	Acanthamoeba castellanii str. Neff	14924886
ACA1_074690	mRNA	ACA1_074690	NW_004457669.1	63748	65145	D	ACA1_074690	join(<63748..63821,63843..64101,64198..64338,64407..64485,64611..64690,64762..64986,65104..>65145)	Acanthamoeba castellanii str. Neff	14924887
ACA1_074700	mRNA	ACA1_074700	NW_004457669.1	65283	66596	R	ACA1_074700	complement(join(<65283..65538,65639..65750,65852..65961,66043..66156,66251..66305,66452..>66596))	Acanthamoeba castellanii str. Neff	14924888
ACA1_074710	mRNA	ACA1_074710	NW_004457669.1	66960	71663	D	ACA1_074710	join(<66960..67349,67574..68830,68905..69299,69379..69426,69510..69606,69695..70202,70304..70432,70513..70594,70700..70784,70857..70946,71041..71106,71193..71348,71526..>71663)	Acanthamoeba castellanii str. Neff	14924889
ACA1_074720	mRNA	ACA1_074720	NW_004457669.1	71876	73050	D	ACA1_074720	join(<71876..72017,72104..72147,72229..72380,72529..72580,72690..72809,72877..>73050)	Acanthamoeba castellanii str. Neff	14924890
ACA1_074730	mRNA	ACA1_074730	NW_004457669.1	73223	74023	R	ACA1_074730	complement(join(<73223..73300,73390..73461,73549..73740,73802..>74023))	Acanthamoeba castellanii str. Neff	14924903
ACA1_074740	mRNA	ACA1_074740	NW_004457669.1	74510	76175	R	ACA1_074740	complement(join(<74510..74663,74758..74863,74970..75041,75160..75281,75385..75698,75778..75936,76059..>76175))	Acanthamoeba castellanii str. Neff	14924904
ACA1_074750	mRNA	ACA1_074750	NW_004457669.1	76307	76875	R	ACA1_074750	complement(join(<76307..76422,76527..76682,76767..>76875))	Acanthamoeba castellanii str. Neff	14924905
ACA1_074760	mRNA	ACA1_074760	NW_004457669.1	77474	78938	D	ACA1_074760	join(<77474..77610,77742..77793,77866..78177,78257..78379,78464..78604,78675..>78938)	Acanthamoeba castellanii str. Neff	14924906
ACA1_074770	mRNA	ACA1_074770	NW_004457669.1	79076	83597	R	ACA1_074770	complement(join(<79076..79150,79230..79311,79441..79540,79654..79786,79893..80024,80110..80292,80385..80468,80571..80641,80734..80841,81001..81111,81203..81302,81413..81522,81605..81743,81828..81917,82027..82089,82189..82336,82424..82485,82564..82675,82755..82846,82936..83019,83104..83126,83216..83279,83373..>83597))	Acanthamoeba castellanii str. Neff	14924907
ACA1_074780	mRNA	ACA1_074780	NW_004457669.1	84477	85226	D	ACA1_074780	join(<84477..84546,84714..84791,84860..84988,85054..>85226)	Acanthamoeba castellanii str. Neff	14924908
ACA1_074790	mRNA	ACA1_074790	NW_004457669.1	85270	86350	D	ACA1_074790	join(<85270..85413,85475..85543,85853..>86350)	Acanthamoeba castellanii str. Neff	14924909
ACA1_074800	mRNA	ACA1_074800	NW_004457669.1	86748	87709	R	ACA1_074800	complement(join(<86748..86820,86909..86967,87039..87156,87238..87311,87385..87514,87594..>87709))	Acanthamoeba castellanii str. Neff	14924910
ACA1_074810	mRNA	ACA1_074810	NW_004457669.1	87891	91137	D	ACA1_074810	join(<87891..87924,87941..88115,88266..88369,88446..88570,88646..88724,88796..88864,88942..89085,89152..89245,89312..89406,89470..89597,89687..89820,89937..89969,90109..90119,90199..90388,90441..90562,90655..90776,90862..90906,91000..>91137)	Acanthamoeba castellanii str. Neff	14924911
ACA1_074820	mRNA	ACA1_074820	NW_004457669.1	91421	94770	D	ACA1_074820	join(<91421..91553,91598..91716,91787..91928,92018..92109,92180..92267,92371..92457,92534..92617,92786..92987,93116..93383,93407..93779,93907..94149,94259..94561,94622..>94770)	Acanthamoeba castellanii str. Neff	14924912
ACA1_074830	mRNA	ACA1_074830	NW_004457669.1	94843	98044	R	ACA1_074830	complement(join(<94843..94920,95031..95122,95358..95487,95597..95713,95817..95919,96112..96244,96325..96440,96575..96723,96981..97121,97224..97352,97434..97671,97750..97888,97960..>98044))	Acanthamoeba castellanii str. Neff	14924913
ACA1_074840	mRNA	ACA1_074840	NW_004457669.1	98201	102840	D	ACA1_074840	join(<98201..98571,98582..98675,98793..98921,99025..99057,99295..99356,99793..99888,99964..100079,100240..100476,100598..100729,100859..101492,101649..101986,102103..102189,102288..102402,102537..102629,102747..>102840)	Acanthamoeba castellanii str. Neff	14924914
ACA1_074850	mRNA	ACA1_074850	NW_004457669.1	102964	104279	R	ACA1_074850	complement(join(<102964..103380,103483..103553,103743..103799,103862..103944,104028..104093,104215..>104279))	Acanthamoeba castellanii str. Neff	14924915
ACA1_074860	mRNA	ACA1_074860	NW_004457669.1	104548	105869	D	ACA1_074860	join(<104548..104719,104843..104937,105004..105111,105379..105450,105557..105650,105757..>105869)	Acanthamoeba castellanii str. Neff	14924916
ACA1_074870	mRNA	ACA1_074870	NW_004457669.1	105960	106847	R	ACA1_074870	complement(join(<105960..106169,106262..106383,106471..106535,106600..>106847))	Acanthamoeba castellanii str. Neff	14924917
ACA1_074880	mRNA	ACA1_074880	NW_004457669.1	107610	108328	R	ACA1_074880	complement(join(<107610..107704,107792..107867,108020..>108328))	Acanthamoeba castellanii str. Neff	14924918
ACA1_074890	mRNA	ACA1_074890	NW_004457669.1	108466	110187	D	ACA1_074890	join(<108466..108631,108788..109599,109677..109883,110017..>110187)	Acanthamoeba castellanii str. Neff	14924919
ACA1_074900	mRNA	ACA1_074900	NW_004457669.1	110362	111457	R	ACA1_074900	complement(join(<110362..110492,110617..110681,110803..110930,110995..111105,111162..111263,111329..>111457))	Acanthamoeba castellanii str. Neff	14924920
ACA1_074910	mRNA	ACA1_074910	NW_004457669.1	111627	111959	D	ACA1_074910	join(<111627..111765,111835..>111959)	Acanthamoeba castellanii str. Neff	14924921
ACA1_074920	mRNA	ACA1_074920	NW_004457669.1	112262	113632	D	ACA1_074920	join(<112262..112333,112394..112604,112678..112742,112845..113004,113070..113248,113330..>113632)	Acanthamoeba castellanii str. Neff	14924922
ACA1_074930	mRNA	ACA1_074930	NW_004457669.1	114094	116061	D	ACA1_074930	join(<114094..114168,114246..114327,114570..114734,114830..114916,114991..115147,115227..115305,115382..115506,115589..115913,115987..>116061)	Acanthamoeba castellanii str. Neff	14924923
ACA1_074940	mRNA	ACA1_074940	NW_004457669.1	116600	117196	D	ACA1_074940	join(<116600..116719,116791..116901,116975..>117196)	Acanthamoeba castellanii str. Neff	14924924
ACA1_074960	mRNA	ACA1_074960	NW_004457669.1	119272	120116	R	ACA1_074960	complement(join(<119272..119502,119586..>120116))	Acanthamoeba castellanii str. Neff	14924926
ACA1_074970	mRNA	ACA1_074970	NW_004457669.1	120400	121431	D	ACA1_074970	join(<120400..120624,120727..120897,120963..121054,121143..>121431)	Acanthamoeba castellanii str. Neff	14924927
ACA1_074980	mRNA	ACA1_074980	NW_004457669.1	121568	123395	D	ACA1_074980	join(<121568..121667,121737..121817,121898..122009,122025..122193,122263..122349,122436..122594,122684..122778,122861..122911,123056..123191,123291..>123395)	Acanthamoeba castellanii str. Neff	14924928
ACA1_074990	mRNA	ACA1_074990	NW_004457669.1	123876	125535	D	ACA1_074990	join(<123876..124101,124212..124727,124812..124879,124960..>125535)	Acanthamoeba castellanii str. Neff	14924929
ACA1_075000	mRNA	ACA1_075000	NW_004457669.1	125676	125963	D	ACA1_075000	join(<125676..125880,125893..>125963)	Acanthamoeba castellanii str. Neff	14924930
ACA1_075010	mRNA	ACA1_075010	NW_004457669.1	126201	127057	R	ACA1_075010	complement(join(<126201..126291,126364..126527,126616..126803,126876..126944,127006..>127057))	Acanthamoeba castellanii str. Neff	14924931
ACA1_075020	mRNA	ACA1_075020	NW_004457669.1	127698	128812	R	ACA1_075020	complement(join(<127698..127782,127872..128035,128138..128325,128393..128461,128561..128601,128757..>128812))	Acanthamoeba castellanii str. Neff	14924932
ACA1_075030	mRNA	ACA1_075030	NW_004457669.1	129188	132081	D	ACA1_075030	join(<129188..129316,129403..129440,129527..129588,129691..129768,129896..129995,130133..130224,130395..130520,130605..130677,130791..130903,131064..131107,131210..131293,131370..131508,131571..131625,131769..>132081)	Acanthamoeba castellanii str. Neff	14924933
ACA1_075040	mRNA	ACA1_075040	NW_004457669.1	132280	136759	R	ACA1_075040	complement(join(<132280..132418,132494..132645,132885..132938,133008..133099,133215..133289,133430..133576,133672..133788,133863..133992,134125..134190,134332..134487,134597..134704,134877..135017,135155..135318,135393..135492,135610..135820,136042..136124,136285..136407,136682..>136759))	Acanthamoeba castellanii str. Neff	14924934
ACA1_075050	mRNA	ACA1_075050	NW_004457669.1	137215	142778	D	ACA1_075050	join(<137215..137338,137560..137666,138077..138151,138246..138318,138415..138568,138639..138784,138914..139065,139155..139228,139364..139662,139833..140088,140185..140261,140356..140423,140501..140603,140676..140851,141011..141145,141252..141363,141483..141586,141657..141785,141882..142020,142135..142288,142370..142463,142528..142636,142759..>142778)	Acanthamoeba castellanii str. Neff	14924935
ACA1_075160	mRNA	ACA1_075160	NW_004457669.1	142905	143395	R	ACA1_075160	complement(join(<142905..143116,143194..>143395))	Acanthamoeba castellanii str. Neff	14924936
ACA1_075170	mRNA	ACA1_075170	NW_004457669.1	143693	145928	D	ACA1_075170	join(<143693..143850,143943..144062,144149..144227,144320..144418,144538..144631,144800..144881,144944..145041,145134..145693,145785..>145928)	Acanthamoeba castellanii str. Neff	14924937
ACA1_075180	mRNA	ACA1_075180	NW_004457669.1	146161	147559	R	ACA1_075180	complement(join(<146161..146300,146369..146504,146782..146868,146993..147103,147214..147322,147432..>147559))	Acanthamoeba castellanii str. Neff	14924938
ACA1_075190	mRNA	ACA1_075190	NW_004457669.1	147680	149450	R	ACA1_075190	complement(join(<147680..147890,147990..148118,148236..148306,148438..148508,148610..148793,148892..149197,149263..149351,149411..>149450))	Acanthamoeba castellanii str. Neff	14924939
ACA1_075210	mRNA	ACA1_075210	NW_004457669.1	153036	153915	R	ACA1_075210	complement(join(<153036..153090,153195..153328,153405..153494,153688..>153915))	Acanthamoeba castellanii str. Neff	14924941
ACA1_075220	mRNA	ACA1_075220	NW_004457669.1	154667	157793	R	ACA1_075220	complement(join(<154667..154780,154884..155272,155344..156762,156815..156869,156952..157030,157085..157118,157138..157247,157319..157402,157469..157624,157711..>157793))	Acanthamoeba castellanii str. Neff	14924942
ACA1_075230	mRNA	ACA1_075230	NW_004457669.1	157868	158776	R	ACA1_075230	complement(join(<157868..158170,158269..158479,158553..158631,158701..>158776))	Acanthamoeba castellanii str. Neff	14924943
ACA1_075240	mRNA	ACA1_075240	NW_004457669.1	159215	159919	R	ACA1_075240	complement(join(<159215..159355,159446..159535,159623..>159919))	Acanthamoeba castellanii str. Neff	14924944
ACA1_075250	mRNA	ACA1_075250	NW_004457669.1	160420	161873	R	ACA1_075250	complement(join(<160420..161591,161726..>161873))	Acanthamoeba castellanii str. Neff	14924945
ACA1_075260	mRNA	ACA1_075260	NW_004457669.1	163144	163909	R	ACA1_075260	complement(join(<163144..163167,163255..163398,163458..163684,163768..>163909))	Acanthamoeba castellanii str. Neff	14924946
ACA1_075270	mRNA	ACA1_075270	NW_004457669.1	164140	166075	R	ACA1_075270	complement(join(<164140..164702,164776..164973,165062..165178,165269..165348,165455..165618,165699..165754,165844..165973,166061..>166075))	Acanthamoeba castellanii str. Neff	14924947
ACA1_075280	mRNA	ACA1_075280	NW_004457669.1	166437	166872	R	ACA1_075280	complement(join(<166437..166448,166474..166719,166807..>166872))	Acanthamoeba castellanii str. Neff	14924948
ACA1_075290	mRNA	ACA1_075290	NW_004457669.1	167021	169054	R	ACA1_075290	complement(join(<167021..167410,167482..167702,167788..167956,168039..168421,168503..168719,168863..>169054))	Acanthamoeba castellanii str. Neff	14924949
ACA1_075300	mRNA	ACA1_075300	NW_004457669.1	169382	173077	D	ACA1_075300	join(<169382..169590,169657..169727,169813..169948,170049..170111,170261..170389,170495..170528,170596..170695,170785..170882,170983..171130,171259..171383,171553..171645,171735..171885,171983..172113,172217..172440,172558..172722,172822..>173077)	Acanthamoeba castellanii str. Neff	14924950
ACA1_075310	mRNA	ACA1_075310	NW_004457669.1	173168	174996	R	ACA1_075310	complement(join(<173168..173264,173384..>174996))	Acanthamoeba castellanii str. Neff	14924951
ACA1_075320	mRNA	ACA1_075320	NW_004457669.1	175669	176225	D	ACA1_075320	join(<175669..175888,175999..>176225)	Acanthamoeba castellanii str. Neff	14924952
ACA1_075330	mRNA	ACA1_075330	NW_004457669.1	177284	177724	R	ACA1_075330	complement(join(<177284..177364,177387..177518,177617..>177724))	Acanthamoeba castellanii str. Neff	14924953
ACA1_075340	mRNA	ACA1_075340	NW_004457669.1	179211	183099	R	ACA1_075340	complement(join(<179211..179476,179808..179870,180014..180306,180389..180487,180505..180567,180648..180769,180864..180964,181050..181232,181305..181402,181490..182202,182339..182460,182539..182604,182668..182744,182814..182880,182946..>183099))	Acanthamoeba castellanii str. Neff	14924954
ACA1_075350	mRNA	ACA1_075350	NW_004457669.1	183183	184425	D	ACA1_075350	join(<183183..183351,183470..183530,183641..183763,183863..183988,184075..184186,184285..>184425)	Acanthamoeba castellanii str. Neff	14924955
ACA1_075360	mRNA	ACA1_075360	NW_004457669.1	184620	186411	R	ACA1_075360	complement(join(<184620..184714,184802..184968,185058..185206,185281..185504,185610..185756,185853..185881,186014..>186411))	Acanthamoeba castellanii str. Neff	14924956
ACA1_075370	mRNA	ACA1_075370	NW_004457669.1	186976	189664	D	ACA1_075370	join(<186976..187089,187171..187312,187419..187557,187654..187764,187847..187906,187984..188090,188181..188286,188357..188462,188534..188582,188718..188848,188941..189036,189128..189242,189329..189406,189486..>189664)	Acanthamoeba castellanii str. Neff	14924957
ACA1_075380	mRNA	ACA1_075380	NW_004457669.1	189908	190401	D	ACA1_075380	join(<189908..189933,189990..190093,190157..190210,190289..>190401)	Acanthamoeba castellanii str. Neff	14924958
ACA1_075390	mRNA	ACA1_075390	NW_004457669.1	190573	191883	R	ACA1_075390	complement(join(<190573..190706,190816..190952,191037..191153,191261..191303,191397..191490,191617..>191883))	Acanthamoeba castellanii str. Neff	14924959
ACA1_075400	mRNA	ACA1_075400	NW_004457669.1	192058	192537	D	ACA1_075400	<192058..>192537	Acanthamoeba castellanii str. Neff	14924960
ACA1_122990	mRNA	ACA1_122990	NW_004457668.1	387	908	D	ACA1_122990	join(<387..432,511..602,681..>908)	Acanthamoeba castellanii str. Neff	14924869
ACA1_123200	mRNA	ACA1_123200	NW_004457668.1	2402	3112	D	ACA1_123200	<2402..>3112	Acanthamoeba castellanii str. Neff	14924844
ACA1_123210	mRNA	ACA1_123210	NW_004457668.1	3206	5241	R	ACA1_123210	complement(join(<3206..3670,3767..3967,4031..4127,4249..4820,5017..5066,5112..>5241))	Acanthamoeba castellanii str. Neff	14924845
ACA1_123220	mRNA	ACA1_123220	NW_004457668.1	5321	6918	R	ACA1_123220	complement(join(<5321..5779,5876..6076,6189..6285,6395..>6918))	Acanthamoeba castellanii str. Neff	14924837
ACA1_123230	mRNA	ACA1_123230	NW_004457668.1	7449	11546	R	ACA1_123230	complement(join(<7449..7634,7718..7819,7933..8070,8148..8405,8481..8591,8709..9576,9639..9727,9821..9881,9984..10048,10129..10680,11072..11169,11228..>11546))	Acanthamoeba castellanii str. Neff	14924838
ACA1_123350	mRNA	ACA1_123350	NW_004457668.1	16241	17028	R	ACA1_123350	complement(join(<16241..16397,16487..16563,16642..>17028))	Acanthamoeba castellanii str. Neff	14924840
ACA1_123360	mRNA	ACA1_123360	NW_004457668.1	17708	21042	D	ACA1_123360	join(<17708..17730,18012..18125,18422..18603,18682..19648,19731..19842,19936..20058,20176..20295,20389..20474,20688..>21042)	Acanthamoeba castellanii str. Neff	14924841
ACA1_123370	mRNA	ACA1_123370	NW_004457668.1	21843	24278	D	ACA1_123370	join(<21843..21853,22088..22335,22421..22481,22568..22649,22665..23374,23478..23586,23680..23765,23915..24029,24117..>24278)	Acanthamoeba castellanii str. Neff	14924842
ACA1_123380	mRNA	ACA1_123380	NW_004457668.1	24818	27304	D	ACA1_123380	join(<24818..24975,25212..26304,26365..26483,26586..26798,26898..26994,27089..>27304)	Acanthamoeba castellanii str. Neff	14924843
ACA1_123390	mRNA	ACA1_123390	NW_004457668.1	27369	29506	R	ACA1_123390	complement(join(<27369..27670,27745..27890,28023..28135,28251..28365,28475..28560,28643..28739,28831..29031,29076..>29506))	Acanthamoeba castellanii str. Neff	14924846
ACA1_123500	mRNA	ACA1_123500	NW_004457668.1	31617	33049	D	ACA1_123500	join(<31617..31728,31892..32796,32894..>33049)	Acanthamoeba castellanii str. Neff	14924847
ACA1_123510	mRNA	ACA1_123510	NW_004457668.1	33505	43240	R	ACA1_123510	complement(join(<33505..33906,33967..34114,34303..34379,37011..37111,37232..37624,37694..38652,38725..38924,39013..39171,39254..39370,39446..39520,39615..39796,39879..40129,40196..40343,40430..40565,40645..40791,40867..41108,41188..41540,41656..41969,42040..42300,42399..42419,42510..42647,42734..42782,42990..43092,43162..>43240))	Acanthamoeba castellanii str. Neff	14924848
ACA1_123620	mRNA	ACA1_123620	NW_004457668.1	43723	45532	R	ACA1_123620	complement(join(<43723..43926,44017..44081,44165..44215,44302..44794,44864..>45532))	Acanthamoeba castellanii str. Neff	14924849
ACA1_123630	mRNA	ACA1_123630	NW_004457668.1	45794	47304	R	ACA1_123630	complement(join(<45794..45910,45995..46088,46175..46279,46385..46489,46582..46619,46712..46779,46851..>47304))	Acanthamoeba castellanii str. Neff	14924850
ACA1_123640	mRNA	ACA1_123640	NW_004457668.1	47803	50479	D	ACA1_123640	join(<47803..48336,48475..49288,49312..49453,49540..>50479)	Acanthamoeba castellanii str. Neff	14924851
ACA1_123750	mRNA	ACA1_123750	NW_004457668.1	52804	53238	D	ACA1_123750	<52804..>53238	Acanthamoeba castellanii str. Neff	14924852
ACA1_123760	mRNA	ACA1_123760	NW_004457668.1	53597	56757	D	ACA1_123760	join(<53597..53750,53845..53966,54051..55080,55279..55381,55450..55557,55646..55679,55750..55840,55912..56024,56117..56212,56307..56397,56462..>56757)	Acanthamoeba castellanii str. Neff	14924853
ACA1_123770	mRNA	ACA1_123770	NW_004457668.1	57054	57582	D	ACA1_123770	join(<57054..57263,57415..>57582)	Acanthamoeba castellanii str. Neff	14924854
ACA1_123780	mRNA	ACA1_123780	NW_004457668.1	57975	61941	D	ACA1_123780	join(<57975..60005,60066..60139,60262..60350,60419..>61941)	Acanthamoeba castellanii str. Neff	14924855
ACA1_123790	mRNA	ACA1_123790	NW_004457668.1	62832	63686	D	ACA1_123790	join(<62832..62912,62970..63097,63202..63310,63407..63483,63554..>63686)	Acanthamoeba castellanii str. Neff	14924856
ACA1_123800	mRNA	ACA1_123800	NW_004457668.1	64320	65632	R	ACA1_123800	complement(join(<64320..64367,64500..64614,64712..64797,64868..65015,65124..65388,65506..>65632))	Acanthamoeba castellanii str. Neff	14924857
ACA1_123810	mRNA	ACA1_123810	NW_004457668.1	65791	66185	R	ACA1_123810	complement(join(<65791..66056,66128..>66185))	Acanthamoeba castellanii str. Neff	14924858
ACA1_123820	mRNA	ACA1_123820	NW_004457668.1	66586	67596	R	ACA1_123820	complement(join(<66586..66721,66831..66916,66993..67107,67256..67445,67515..>67596))	Acanthamoeba castellanii str. Neff	14924859
ACA1_123830	mRNA	ACA1_123830	NW_004457668.1	68328	70609	R	ACA1_123830	complement(join(<68328..68492,68677..68791,68886..68970,69093..69217,69292..69613,69690..70247,70352..70450,70573..>70609))	Acanthamoeba castellanii str. Neff	14924860
ACA1_123840	mRNA	ACA1_123840	NW_004457668.1	70728	71528	R	ACA1_123840	complement(join(<70728..71017,71103..71178,71291..71343,71417..>71528))	Acanthamoeba castellanii str. Neff	14924861
ACA1_123850	mRNA	ACA1_123850	NW_004457668.1	71880	72546	D	ACA1_123850	join(<71880..72065,72169..>72546)	Acanthamoeba castellanii str. Neff	14924862
ACA1_123860	mRNA	ACA1_123860	NW_004457668.1	72960	75167	D	ACA1_123860	join(<72960..73114,73263..73555,73716..73828,73906..74324,74441..74537,74615..74752,74826..74912,74988..>75167)	Acanthamoeba castellanii str. Neff	14924863
ACA1_123880	mRNA	ACA1_123880	NW_004457668.1	76868	78548	R	ACA1_123880	complement(join(<76868..76996,77149..77196,77297..77497,77611..77713,77876..78024,78178..78302,78434..>78548))	Acanthamoeba castellanii str. Neff	14924865
ACA1_123890	mRNA	ACA1_123890	NW_004457668.1	79083	81144	R	ACA1_123890	complement(join(<79083..79466,79544..79747,79855..79966,80054..80636,80716..80966,81077..>81144))	Acanthamoeba castellanii str. Neff	14924866
ACA1_123900	mRNA	ACA1_123900	NW_004457668.1	81274	81912	R	ACA1_123900	complement(join(<81274..81695,81747..>81912))	Acanthamoeba castellanii str. Neff	14924867
ACA1_123910	mRNA	ACA1_123910	NW_004457668.1	82061	82345	R	ACA1_123910	complement(<82061..>82345)	Acanthamoeba castellanii str. Neff	14924868
ACA1_300720	mRNA	ACA1_300720	NW_004457667.1	256	1490	D	ACA1_300720	join(<256..438,599..650,763..970,1063..1219,1332..>1490)	Acanthamoeba castellanii str. Neff	14924836
ACA1_300830	mRNA	ACA1_300830	NW_004457667.1	3486	5132	D	ACA1_300830	<3486..>5132	Acanthamoeba castellanii str. Neff	14924834
ACA1_300840	mRNA	ACA1_300840	NW_004457667.1	6079	7158	D	ACA1_300840	join(<6079..6664,6764..6891,6973..>7158)	Acanthamoeba castellanii str. Neff	14924835
ACA1_300850	mRNA	ACA1_300850	NW_004457667.1	7317	9142	D	ACA1_300850	join(<7317..7438,7518..7631,7715..7823,7930..8080,8178..8354,8452..8609,8693..8884,8954..>9142)	Acanthamoeba castellanii str. Neff	14924828
ACA1_300860	mRNA	ACA1_300860	NW_004457667.1	9350	10670	D	ACA1_300860	join(<9350..9476,9600..9958,10041..>10670)	Acanthamoeba castellanii str. Neff	14924829
ACA1_300870	mRNA	ACA1_300870	NW_004457667.1	10748	11326	R	ACA1_300870	complement(join(<10748..10897,11009..>11326))	Acanthamoeba castellanii str. Neff	14924830
ACA1_300880	mRNA	ACA1_300880	NW_004457667.1	11599	16253	R	ACA1_300880	complement(join(<11599..11823,12035..12334,12579..13316,13552..13800,13925..14086,14321..14634,14857..15271,15343..15589,15677..15887,15959..16028,16110..>16253))	Acanthamoeba castellanii str. Neff	14924831
ACA1_300890	mRNA	ACA1_300890	NW_004457667.1	16508	19134	R	ACA1_300890	complement(join(<16508..16721,16821..16910,17003..17144,17222..17284,17354..17584,17680..17803,17928..18040,18126..18164,18241..18317,18418..18473,18607..18725,18993..>19134))	Acanthamoeba castellanii str. Neff	14924832
ACA1_300900	mRNA	ACA1_300900	NW_004457667.1	19293	20114	R	ACA1_300900	complement(join(<19293..19367,19451..19694,19775..19857,19971..>20114))	Acanthamoeba castellanii str. Neff	14924833
ACA1_334900	mRNA	ACA1_334900	NW_004457666.1	3011	8363	R	ACA1_334900	complement(join(<3011..3154,7191..7343,7442..7509,7622..>8363))	Acanthamoeba castellanii str. Neff	14924818
ACA1_335110	mRNA	ACA1_335110	NW_004457666.1	9677	10674	R	ACA1_335110	complement(join(<9677..9713,9965..10039,10154..>10674))	Acanthamoeba castellanii str. Neff	14924819
ACA1_335220	mRNA	ACA1_335220	NW_004457666.1	15038	16049	D	ACA1_335220	join(<15038..15063,15108..15239,15335..15369,15519..15689,15788..15865,15952..>16049)	Acanthamoeba castellanii str. Neff	14924825
ACA1_335230	mRNA	ACA1_335230	NW_004457666.1	16271	22677	D	ACA1_335230	join(<16271..16292,16409..16582,16871..17775,17791..19582,21830..>22677)	Acanthamoeba castellanii str. Neff	14924826
ACA1_335440	mRNA	ACA1_335440	NW_004457666.1	24601	25415	D	ACA1_335440	join(<24601..24810,24849..>25415)	Acanthamoeba castellanii str. Neff	14924820
ACA1_335550	mRNA	ACA1_335550	NW_004457666.1	27458	28618	D	ACA1_335550	join(<27458..27910,28007..>28618)	Acanthamoeba castellanii str. Neff	14924821
ACA1_335560	mRNA	ACA1_335560	NW_004457666.1	29273	29848	D	ACA1_335560	join(<29273..29641,29678..>29848)	Acanthamoeba castellanii str. Neff	14924822
ACA1_335670	mRNA	ACA1_335670	NW_004457666.1	30277	31126	R	ACA1_335670	complement(join(<30277..30564,30629..>31126))	Acanthamoeba castellanii str. Neff	14924823
ACA1_335680	mRNA	ACA1_335680	NW_004457666.1	31400	32041	D	ACA1_335680	join(<31400..31698,31717..>32041)	Acanthamoeba castellanii str. Neff	14924824
ACA1_304720	mRNA	ACA1_304720	NW_004457665.1	9460	10152	D	ACA1_304720	join(<9460..9812,10113..>10152)	Acanthamoeba castellanii str. Neff	14924816
ACA1_304830	mRNA	ACA1_304830	NW_004457665.1	13753	14519	R	ACA1_304830	complement(join(<13753..13941,13956..>14519))	Acanthamoeba castellanii str. Neff	14924817
ACA1_304840	mRNA	ACA1_304840	NW_004457665.1	14846	15275	R	ACA1_304840	complement(join(<14846..15039,15188..>15275))	Acanthamoeba castellanii str. Neff	14924814
ACA1_305050	mRNA	ACA1_305050	NW_004457665.1	30044	30645	D	ACA1_305050	join(<30044..30165,30243..>30645)	Acanthamoeba castellanii str. Neff	14924815
ACA1_082960	mRNA	ACA1_082960	NW_004457664.1	89	862	R	ACA1_082960	complement(<89..>862)	Acanthamoeba castellanii str. Neff	14924812
ACA1_083070	mRNA	ACA1_083070	NW_004457664.1	5437	7697	D	ACA1_083070	join(<5437..5457,5598..5817,5938..6072,6171..6289,6399..6803,6834..7068,7159..>7697)	Acanthamoeba castellanii str. Neff	14924813
ACA1_083080	mRNA	ACA1_083080	NW_004457664.1	7894	10017	R	ACA1_083080	complement(join(<7894..8031,8214..8270,8382..8430,8536..8606,8697..8771,8998..9077,9203..9330,9427..9521,9628..9698,9861..>10017))	Acanthamoeba castellanii str. Neff	14924809
ACA1_083090	mRNA	ACA1_083090	NW_004457664.1	10551	10958	R	ACA1_083090	complement(join(<10551..10757,10827..>10958))	Acanthamoeba castellanii str. Neff	14924810
ACA1_083100	mRNA	ACA1_083100	NW_004457664.1	13230	16184	R	ACA1_083100	complement(join(<13230..13699,13832..13937,14018..14244,14365..14530,14645..15157,15234..15403,15478..15550,15630..15759,15922..15971,16029..>16184))	Acanthamoeba castellanii str. Neff	14924811
ACA1_297750	mRNA	ACA1_297750	NW_004457663.1	475	1903	R	ACA1_297750	complement(join(<475..780,881..1097,1231..1384,1501..1671,1831..>1903))	Acanthamoeba castellanii str. Neff	14924808
ACA1_297760	mRNA	ACA1_297760	NW_004457663.1	2767	3990	D	ACA1_297760	join(<2767..2935,3068..3226,3402..3503,3662..3740,3816..>3990)	Acanthamoeba castellanii str. Neff	14924805
ACA1_297770	mRNA	ACA1_297770	NW_004457663.1	4263	5604	D	ACA1_297770	join(<4263..4732,4877..5091,5178..5324,5393..>5604)	Acanthamoeba castellanii str. Neff	14924804
ACA1_297780	mRNA	ACA1_297780	NW_004457663.1	6258	7133	D	ACA1_297780	<6258..>7133	Acanthamoeba castellanii str. Neff	14924806
ACA1_297790	mRNA	ACA1_297790	NW_004457663.1	7545	10358	R	ACA1_297790	complement(join(<7545..7550,7638..7847,7978..8107,8256..9523,9594..>10358))	Acanthamoeba castellanii str. Neff	14924807
ACA1_314330	mRNA	ACA1_314330	NW_004457662.1	122	1273	R	ACA1_314330	complement(join(<122..160,183..262,367..>1273))	Acanthamoeba castellanii str. Neff	14924803
ACA1_314440	mRNA	ACA1_314440	NW_004457662.1	7888	14446	R	ACA1_314440	complement(join(<7888..8122,8211..8254,9063..10185,10288..10769,10878..10994,11076..13552,13915..>14446))	Acanthamoeba castellanii str. Neff	14924801
ACA1_314550	mRNA	ACA1_314550	NW_004457662.1	14894	15415	D	ACA1_314550	<14894..>15415	Acanthamoeba castellanii str. Neff	14924802
ACA1_023050	mRNA	ACA1_023050	NW_004457661.1	2649	3686	D	ACA1_023050	join(<2649..2935,2955..3025,3097..3152,3236..3286,3408..3500,3537..>3686)	Acanthamoeba castellanii str. Neff	14924800
ACA1_023060	mRNA	ACA1_023060	NW_004457661.1	4564	5799	R	ACA1_023060	complement(join(<4564..5088,5110..>5799))	Acanthamoeba castellanii str. Neff	14924787
ACA1_023070	mRNA	ACA1_023070	NW_004457661.1	6512	7465	D	ACA1_023070	<6512..>7465	Acanthamoeba castellanii str. Neff	14924788
ACA1_023080	mRNA	ACA1_023080	NW_004457661.1	8556	8815	D	ACA1_023080	join(<8556..8639,8675..>8815)	Acanthamoeba castellanii str. Neff	14924789
ACA1_023090	mRNA	ACA1_023090	NW_004457661.1	11649	12210	D	ACA1_023090	join(<11649..11837,11905..>12210)	Acanthamoeba castellanii str. Neff	14924790
ACA1_023100	mRNA	ACA1_023100	NW_004457661.1	16554	17385	D	ACA1_023100	join(<16554..16791,16952..>17385)	Acanthamoeba castellanii str. Neff	14924791
ACA1_023110	mRNA	ACA1_023110	NW_004457661.1	20201	23459	D	ACA1_023110	join(<20201..20549,20693..21232,21293..21645,21752..21929,21988..>23459)	Acanthamoeba castellanii str. Neff	14924792
ACA1_023120	mRNA	ACA1_023120	NW_004457661.1	25888	27607	R	ACA1_023120	complement(join(<25888..26108,26178..26440,26533..26611,26708..26836,26930..27022,27093..27203,27275..27361,27424..27504,27580..>27607))	Acanthamoeba castellanii str. Neff	14924793
ACA1_023130	mRNA	ACA1_023130	NW_004457661.1	27870	29301	R	ACA1_023130	complement(join(<27870..27961,28024..28098,28159..28239,28310..28393,28454..28594,28710..28772,28835..28944,29027..29165,29226..>29301))	Acanthamoeba castellanii str. Neff	14924794
ACA1_023140	mRNA	ACA1_023140	NW_004457661.1	30536	31270	D	ACA1_023140	join(<30536..30781,30892..31020,31226..>31270)	Acanthamoeba castellanii str. Neff	14924795
ACA1_023150	mRNA	ACA1_023150	NW_004457661.1	34385	35018	R	ACA1_023150	complement(join(<34385..34910,34933..>35018))	Acanthamoeba castellanii str. Neff	14924796
ACA1_023160	mRNA	ACA1_023160	NW_004457661.1	35508	35879	R	ACA1_023160	complement(join(<35508..35779,35828..>35879))	Acanthamoeba castellanii str. Neff	14924797
ACA1_023170	mRNA	ACA1_023170	NW_004457661.1	38215	39657	D	ACA1_023170	join(<38215..38511,38598..38847,38922..39349,39460..>39657)	Acanthamoeba castellanii str. Neff	14924798
ACA1_023180	mRNA	ACA1_023180	NW_004457661.1	41176	41885	D	ACA1_023180	join(<41176..41319,41521..41646,41661..>41885)	Acanthamoeba castellanii str. Neff	14924799
ACA1_345010	mRNA	ACA1_345010	NW_004457660.1	21	1217	R	ACA1_345010	complement(<21..>1217)	Acanthamoeba castellanii str. Neff	14924786
ACA1_345120	mRNA	ACA1_345120	NW_004457660.1	8309	9832	R	ACA1_345120	complement(join(<8309..8760,8839..8945,9022..9141,9215..9326,9412..9474,9604..9681,9769..>9832))	Acanthamoeba castellanii str. Neff	14924785
ACA1_345230	mRNA	ACA1_345230	NW_004457660.1	12733	15141	R	ACA1_345230	complement(join(<12733..13425,13541..13596,13671..13990,14077..14177,14292..14433,14529..14656,14836..14898,15043..>15141))	Acanthamoeba castellanii str. Neff	14924781
ACA1_345340	mRNA	ACA1_345340	NW_004457660.1	18955	19899	R	ACA1_345340	complement(join(<18955..19035,19142..19268,19418..19539,19666..19761,19852..>19899))	Acanthamoeba castellanii str. Neff	14924782
ACA1_345450	mRNA	ACA1_345450	NW_004457660.1	24576	25298	D	ACA1_345450	join(<24576..24699,24799..24895,24967..25042,25131..>25298)	Acanthamoeba castellanii str. Neff	14924783
ACA1_345460	mRNA	ACA1_345460	NW_004457660.1	27137	27513	D	ACA1_345460	<27137..>27513	Acanthamoeba castellanii str. Neff	14924784
ACA1_025830	mRNA	ACA1_025830	NW_004457659.1	568	1044	R	ACA1_025830	complement(join(<568..577,610..848,933..997,1017..>1044))	Acanthamoeba castellanii str. Neff	14924780
ACA1_025840	mRNA	ACA1_025840	NW_004457659.1	3179	4867	D	ACA1_025840	join(<3179..3245,3265..3429,3536..3702,3732..3782,3804..3964,4045..4371,4459..>4867)	Acanthamoeba castellanii str. Neff	14924775
ACA1_025850	mRNA	ACA1_025850	NW_004457659.1	7534	7929	R	ACA1_025850	complement(join(<7534..7744,7766..>7929))	Acanthamoeba castellanii str. Neff	14924776
ACA1_025860	mRNA	ACA1_025860	NW_004457659.1	8150	8434	D	ACA1_025860	<8150..>8434	Acanthamoeba castellanii str. Neff	14924777
ACA1_025870	mRNA	ACA1_025870	NW_004457659.1	8537	9337	R	ACA1_025870	complement(join(<8537..8602,8634..9287,9299..>9337))	Acanthamoeba castellanii str. Neff	14924778
ACA1_025880	mRNA	ACA1_025880	NW_004457659.1	12137	13521	R	ACA1_025880	complement(join(<12137..12430,12445..>13521))	Acanthamoeba castellanii str. Neff	14924779
ACA1_001250	mRNA	ACA1_001250	NW_004457658.1	4004	11317	D	ACA1_001250	join(<4004..4022,4056..4160,4229..4393,4550..4584,4654..4784,4850..4923,4986..5051,5151..5386,5449..5662,5718..5826,5893..5974,6051..6254,6318..6418,6502..6680,6752..8513,8577..8880,8955..9134,9198..9329,9410..10177,10303..10455,10559..>11317)	Acanthamoeba castellanii str. Neff	14924768
ACA1_001260	mRNA	ACA1_001260	NW_004457658.1	13444	16452	D	ACA1_001260	join(<13444..14548,14663..14757,14870..14918,15050..15114,15233..15330,15425..15519,15590..15617,15728..15890,15992..16171,16273..>16452)	Acanthamoeba castellanii str. Neff	14924769
ACA1_001280	mRNA	ACA1_001280	NW_004457658.1	17392	18733	R	ACA1_001280	complement(join(<17392..17419,17454..17540,17670..17789,17931..18060,18225..18593,18691..>18733))	Acanthamoeba castellanii str. Neff	14924773
ACA1_001300	mRNA	ACA1_001300	NW_004457658.1	20701	23681	R	ACA1_001300	complement(join(<20701..20926,21000..21296,21363..21485,21588..21654,21765..21945,22128..22244,22343..22587,22741..22866,22955..23050,23163..23269,23390..23498,23576..>23681))	Acanthamoeba castellanii str. Neff	14924770
ACA1_001310	mRNA	ACA1_001310	NW_004457658.1	23914	28347	D	ACA1_001310	join(<23914..24087,27979..28123,28247..>28347)	Acanthamoeba castellanii str. Neff	14924771
ACA1_195390	mRNA	ACA1_195390	NW_004457657.1	17	2152	R	ACA1_195390	complement(join(<17..76,191..282,415..515,658..851,953..1010,1120..1204,1296..1566,1630..1656,1715..2001,2116..>2152))	Acanthamoeba castellanii str. Neff	14924766
ACA1_195400	mRNA	ACA1_195400	NW_004457657.1	2439	5977	D	ACA1_195400	join(<2439..2519,2704..2862,3044..3314,3485..3602,3723..3877,4015..4230,4330..4417,4491..4549,4656..4732,4799..4925,5097..5239,5389..5578,5682..>5977)	Acanthamoeba castellanii str. Neff	14924726
ACA1_195410	mRNA	ACA1_195410	NW_004457657.1	6425	6892	D	ACA1_195410	<6425..>6892	Acanthamoeba castellanii str. Neff	14924727
ACA1_195420	mRNA	ACA1_195420	NW_004457657.1	7310	9792	D	ACA1_195420	join(<7310..7677,7787..7907,8120..8186,8247..8464,8543..8650,8721..8876,8974..9413,9426..9514,9584..>9792)	Acanthamoeba castellanii str. Neff	14924728
ACA1_195530	mRNA	ACA1_195530	NW_004457657.1	10570	11502	D	ACA1_195530	join(<10570..10580,10629..>11502)	Acanthamoeba castellanii str. Neff	14924729
ACA1_195540	mRNA	ACA1_195540	NW_004457657.1	11553	13764	R	ACA1_195540	complement(join(<11553..11696,11794..11924,12075..12225,12373..12507,12576..12730,12799..12865,12940..13067,13232..13427,13557..13634,13720..>13764))	Acanthamoeba castellanii str. Neff	14924730
ACA1_195550	mRNA	ACA1_195550	NW_004457657.1	14144	15046	R	ACA1_195550	complement(join(<14144..14715,14740..>15046))	Acanthamoeba castellanii str. Neff	14924731
ACA1_195560	mRNA	ACA1_195560	NW_004457657.1	15256	17075	D	ACA1_195560	join(<15256..15747,15813..15901,15996..16187,16283..>17075)	Acanthamoeba castellanii str. Neff	14924732
ACA1_195570	mRNA	ACA1_195570	NW_004457657.1	17302	18505	D	ACA1_195570	join(<17302..17355,17464..17604,17719..17925,18007..18061,18145..18293,18410..>18505)	Acanthamoeba castellanii str. Neff	14924733
ACA1_195580	mRNA	ACA1_195580	NW_004457657.1	19057	19882	D	ACA1_195580	join(<19057..19079,19140..19204,19329..19491,19560..19698,19778..>19882)	Acanthamoeba castellanii str. Neff	14924734
ACA1_195590	mRNA	ACA1_195590	NW_004457657.1	20466	22357	R	ACA1_195590	complement(join(<20466..21262,21402..21995,22114..>22357))	Acanthamoeba castellanii str. Neff	14924735
ACA1_195700	mRNA	ACA1_195700	NW_004457657.1	22706	23464	R	ACA1_195700	complement(<22706..>23464)	Acanthamoeba castellanii str. Neff	14924736
ACA1_195710	mRNA	ACA1_195710	NW_004457657.1	24563	25395	R	ACA1_195710	complement(join(<24563..24704,24849..24993,25032..>25395))	Acanthamoeba castellanii str. Neff	14924737
ACA1_195720	mRNA	ACA1_195720	NW_004457657.1	25678	26343	R	ACA1_195720	complement(join(<25678..25985,26127..>26343))	Acanthamoeba castellanii str. Neff	14924738
ACA1_195730	mRNA	ACA1_195730	NW_004457657.1	26966	27876	R	ACA1_195730	complement(join(<26966..27716,27821..>27876))	Acanthamoeba castellanii str. Neff	14924739
ACA1_195840	mRNA	ACA1_195840	NW_004457657.1	30713	34171	D	ACA1_195840	join(<30713..30933,31088..31194,31289..31380,31500..31520,31646..31735,31807..31926,32030..32155,32260..32366,32441..32544,32622..32852,32949..33089,33179..33298,33390..33617,33722..33895,34026..>34171)	Acanthamoeba castellanii str. Neff	14924740
ACA1_195850	mRNA	ACA1_195850	NW_004457657.1	34318	36354	D	ACA1_195850	join(<34318..34578,34722..34757,34850..34907,34984..35075,35149..35238,35325..35524,35610..35721,35794..35924,36039..>36354)	Acanthamoeba castellanii str. Neff	14924741
ACA1_195960	mRNA	ACA1_195960	NW_004457657.1	41028	42509	R	ACA1_195960	complement(join(<41028..41378,41396..41429,41890..42282,42394..>42509))	Acanthamoeba castellanii str. Neff	14924742
ACA1_196070	mRNA	ACA1_196070	NW_004457657.1	43176	44036	R	ACA1_196070	complement(join(<43176..43319,43351..43581,43692..43913,43974..>44036))	Acanthamoeba castellanii str. Neff	14924743
ACA1_196080	mRNA	ACA1_196080	NW_004457657.1	44328	47807	D	ACA1_196080	join(<44328..44358,44495..44628,44739..44822,44872..44988,45125..45286,45367..45541,45672..45799,45910..45977,46119..46225,46316..46389,46502..46636,46747..46986,47074..47193,47262..47501,47655..>47807)	Acanthamoeba castellanii str. Neff	14924744
ACA1_196090	mRNA	ACA1_196090	NW_004457657.1	48002	51328	D	ACA1_196090	join(<48002..48095,48157..48234,48381..48497,48619..48773,48901..48957,49076..49193,49337..49539,49653..49772,49855..49982,50081..50289,50358..50524,50710..50802,50887..50988,51224..>51328)	Acanthamoeba castellanii str. Neff	14924745
ACA1_196200	mRNA	ACA1_196200	NW_004457657.1	52844	53683	D	ACA1_196200	join(<52844..52947,53048..53141,53208..53301,53403..53545,53630..>53683)	Acanthamoeba castellanii str. Neff	14924746
ACA1_196310	mRNA	ACA1_196310	NW_004457657.1	55436	57681	D	ACA1_196310	join(<55436..55582,55664..55950,56026..56164,56216..56308,56396..56459,56531..56646,56761..56942,57153..>57681)	Acanthamoeba castellanii str. Neff	14924747
ACA1_196320	mRNA	ACA1_196320	NW_004457657.1	57869	61640	D	ACA1_196320	join(<57869..58059,58170..58442,58544..59876,60083..60195,60286..60403,60485..60608,60703..60801,60883..61022,61103..61189,61325..61453,61545..>61640)	Acanthamoeba castellanii str. Neff	14924748
ACA1_196530	mRNA	ACA1_196530	NW_004457657.1	62412	62609	D	ACA1_196530	<62412..>62609	Acanthamoeba castellanii str. Neff	14924749
ACA1_196550	mRNA	ACA1_196550	NW_004457657.1	64730	68097	R	ACA1_196550	complement(join(<64730..64941,65049..65261,65363..65435,65528..65695,65824..65917,65930..66027,66134..66246,66360..66429,66526..66605,66694..67007,67123..67226,67311..67476,67592..>68097))	Acanthamoeba castellanii str. Neff	14924751
ACA1_196660	mRNA	ACA1_196660	NW_004457657.1	68289	68438	D	ACA1_196660	<68289..>68438	Acanthamoeba castellanii str. Neff	14924752
ACA1_196680	mRNA	ACA1_196680	NW_004457657.1	69727	70874	D	ACA1_196680	join(<69727..69758,69779..70337,70359..>70874)	Acanthamoeba castellanii str. Neff	14924754
ACA1_196690	mRNA	ACA1_196690	NW_004457657.1	70981	72397	D	ACA1_196690	join(<70981..71044,71114..71169,71244..71363,71444..71551,71641..71786,71844..71926,72015..72068,72165..>72397)	Acanthamoeba castellanii str. Neff	14924755
ACA1_196710	mRNA	ACA1_196710	NW_004457657.1	77412	78852	D	ACA1_196710	join(<77412..77782,77863..78067,78129..78411,78494..>78852)	Acanthamoeba castellanii str. Neff	14924757
ACA1_196720	mRNA	ACA1_196720	NW_004457657.1	79049	79850	R	ACA1_196720	complement(join(<79049..79309,79400..79602,79682..>79850))	Acanthamoeba castellanii str. Neff	14924758
ACA1_196730	mRNA	ACA1_196730	NW_004457657.1	80023	83665	D	ACA1_196730	join(<80023..81066,81187..81281,81386..82214,82295..82450,82556..>83665)	Acanthamoeba castellanii str. Neff	14924759
ACA1_196840	mRNA	ACA1_196840	NW_004457657.1	84238	84702	R	ACA1_196840	complement(join(<84238..84535,84671..>84702))	Acanthamoeba castellanii str. Neff	14924760
ACA1_196850	mRNA	ACA1_196850	NW_004457657.1	84917	85920	R	ACA1_196850	complement(join(<84917..85258,85351..85499,85577..85658,85801..>85920))	Acanthamoeba castellanii str. Neff	14924761
ACA1_196960	mRNA	ACA1_196960	NW_004457657.1	86116	86622	D	ACA1_196960	join(<86116..86197,86264..>86622)	Acanthamoeba castellanii str. Neff	14924762
ACA1_196970	mRNA	ACA1_196970	NW_004457657.1	86931	87980	D	ACA1_196970	join(<86931..87149,87273..87402,87480..87656,87732..87858,87917..>87980)	Acanthamoeba castellanii str. Neff	14924763
ACA1_197080	mRNA	ACA1_197080	NW_004457657.1	88782	89486	D	ACA1_197080	<88782..>89486	Acanthamoeba castellanii str. Neff	14924764
ACA1_197190	mRNA	ACA1_197190	NW_004457657.1	90736	91235	R	ACA1_197190	complement(join(<90736..90896,90970..91058,91164..>91235))	Acanthamoeba castellanii str. Neff	14924765
ACA1_024630	mRNA	ACA1_024630	NW_004457656.1	1050	3299	D	ACA1_024630	join(<1050..1203,1410..1451,1583..1644,1734..1859,1933..2026,2125..2205,2288..2380,2473..2558,2652..2719,2784..2898,2971..3113,3185..>3299)	Acanthamoeba castellanii str. Neff	14924725
ACA1_024750	mRNA	ACA1_024750	NW_004457656.1	5210	7710	D	ACA1_024750	join(<5210..5504,5588..5986,6612..6853,6929..7015,7090..7477,7558..7663,7695..>7710)	Acanthamoeba castellanii str. Neff	14924718
ACA1_024960	mRNA	ACA1_024960	NW_004457656.1	12464	17892	D	ACA1_024960	join(<12464..12529,12722..12791,12899..13020,13128..13930,14033..14396,14533..14613,14702..14811,14914..14932,14992..15071,15161..15892,15979..16063,16134..16243,16421..16538,16621..16694,16776..16908,17020..>17892)	Acanthamoeba castellanii str. Neff	14924719
ACA1_024970	mRNA	ACA1_024970	NW_004457656.1	18263	19531	D	ACA1_024970	<18263..>19531	Acanthamoeba castellanii str. Neff	14924720
ACA1_024980	mRNA	ACA1_024980	NW_004457656.1	19935	23927	R	ACA1_024980	complement(join(<19935..20734,20861..21103,21277..21512,21899..22081,22178..22371,22465..22540,22625..22712,22824..22926,23028..23088,23176..23643,23755..>23927))	Acanthamoeba castellanii str. Neff	14924721
ACA1_024990	mRNA	ACA1_024990	NW_004457656.1	24393	25247	R	ACA1_024990	complement(join(<24393..24503,24591..>25247))	Acanthamoeba castellanii str. Neff	14924722
ACA1_025000	mRNA	ACA1_025000	NW_004457656.1	25648	30063	D	ACA1_025000	join(<25648..25769,26012..26150,26256..26342,26479..26578,26981..27098,27170..27281,27442..27457,27504..27675,27800..28092,28185..28260,28357..28484,28570..28687,28798..28923,29016..29121,29210..29406,29478..>30063)	Acanthamoeba castellanii str. Neff	14924723
ACA1_315270	mRNA	ACA1_315270	NW_004457655.1	2008	2691	R	ACA1_315270	complement(<2008..>2691)	Acanthamoeba castellanii str. Neff	14924717
ACA1_315380	mRNA	ACA1_315380	NW_004457655.1	3697	4812	D	ACA1_315380	join(<3697..3931,4104..4250,4370..4471,4604..>4812)	Acanthamoeba castellanii str. Neff	14924716
ACA1_315490	mRNA	ACA1_315490	NW_004457655.1	9417	10062	D	ACA1_315490	join(<9417..9539,9655..9860,9945..>10062)	Acanthamoeba castellanii str. Neff	14924715
ACA1_067690	mRNA	ACA1_067690	NW_004457654.1	646	1633	D	ACA1_067690	join(<646..715,774..970,1026..1529,1619..>1633)	Acanthamoeba castellanii str. Neff	14924714
ACA1_067700	mRNA	ACA1_067700	NW_004457654.1	2504	2719	D	ACA1_067700	<2504..>2719	Acanthamoeba castellanii str. Neff	14924160
ACA1_067710	mRNA	ACA1_067710	NW_004457654.1	4197	4436	R	ACA1_067710	complement(<4197..>4436)	Acanthamoeba castellanii str. Neff	14924161
ACA1_067720	mRNA	ACA1_067720	NW_004457654.1	5277	5549	D	ACA1_067720	join(<5277..5290,5339..>5549)	Acanthamoeba castellanii str. Neff	14924162
ACA1_067730	mRNA	ACA1_067730	NW_004457654.1	6197	7215	R	ACA1_067730	complement(join(<6197..6514,6835..6947,7017..>7215))	Acanthamoeba castellanii str. Neff	14924163
ACA1_067740	mRNA	ACA1_067740	NW_004457654.1	7357	8446	R	ACA1_067740	complement(join(<7357..7724,7876..8150,8409..>8446))	Acanthamoeba castellanii str. Neff	14924164
ACA1_067750	mRNA	ACA1_067750	NW_004457654.1	8839	9291	D	ACA1_067750	<8839..>9291	Acanthamoeba castellanii str. Neff	14924165
ACA1_067760	mRNA	ACA1_067760	NW_004457654.1	10281	11289	R	ACA1_067760	complement(join(<10281..10366,10444..10582,10717..10909,11192..>11289))	Acanthamoeba castellanii str. Neff	14924166
ACA1_067770	mRNA	ACA1_067770	NW_004457654.1	11843	13106	D	ACA1_067770	join(<11843..11938,12026..12224,12332..12696,12778..12864,12945..>13106)	Acanthamoeba castellanii str. Neff	14924167
ACA1_067780	mRNA	ACA1_067780	NW_004457654.1	13717	15149	D	ACA1_067780	join(<13717..13838,13921..13995,14052..14161,14236..14355,14431..14499,14569..14653,14686..14796,14879..>15149)	Acanthamoeba castellanii str. Neff	14924168
ACA1_067790	mRNA	ACA1_067790	NW_004457654.1	15950	17391	R	ACA1_067790	complement(join(<15950..16044,16228..16327,16400..16568,16655..16835,16915..16970,17114..17264,17352..>17391))	Acanthamoeba castellanii str. Neff	14924169
ACA1_067800	mRNA	ACA1_067800	NW_004457654.1	17497	18257	R	ACA1_067800	complement(join(<17497..17644,17764..17845,17896..18026,18133..>18257))	Acanthamoeba castellanii str. Neff	14924170
ACA1_067810	mRNA	ACA1_067810	NW_004457654.1	18556	27544	D	ACA1_067810	join(<18556..19312,19493..19560,19662..19772,19841..19967,20062..20612,20710..20801,20905..21059,21137..21300,21414..21521,21607..21743,21827..21960,22038..22117,22195..22290,22360..22440,22521..22613,22692..22861,22945..23136,23210..23321,23408..23559,23654..23813,23928..24025,24173..24329,24439..24602,24685..24763,24862..24972,25049..25155,25258..25330,25410..25619,25780..25920,26016..26108,26197..26342,26449..26587,26716..26802,26886..27053,27172..27303,27371..>27544)	Acanthamoeba castellanii str. Neff	14924171
ACA1_067820	mRNA	ACA1_067820	NW_004457654.1	27642	28794	D	ACA1_067820	join(<27642..27765,27859..28007,28089..28221,28311..28418,28548..28633,28729..>28794)	Acanthamoeba castellanii str. Neff	14924172
ACA1_067830	mRNA	ACA1_067830	NW_004457654.1	28913	30718	R	ACA1_067830	complement(join(<28913..29035,29145..29687,29834..30408,30496..>30718))	Acanthamoeba castellanii str. Neff	14924173
ACA1_067840	mRNA	ACA1_067840	NW_004457654.1	31243	40590	D	ACA1_067840	join(<31243..31255,31278..31347,31420..31495,31582..31713,31810..31902,32005..32148,32260..32337,32428..32574,32653..32796,32897..32992,33056..33203,33286..33377,33436..33591,33679..33873,33967..34111,34198..34287,34361..34538,34631..34952,35034..35176,35267..35759,35832..36038,36137..36966,37103..37324,37411..37495,37592..37961,38065..38226,38340..38485,38575..38709,38815..38955,39056..39150,39238..39430,39532..39695,39791..39993,40076..40328,40446..>40590)	Acanthamoeba castellanii str. Neff	14924174
ACA1_067850	mRNA	ACA1_067850	NW_004457654.1	40682	41251	R	ACA1_067850	complement(join(<40682..40749,40832..41038,41146..>41251))	Acanthamoeba castellanii str. Neff	14924175
ACA1_067860	mRNA	ACA1_067860	NW_004457654.1	41631	42860	D	ACA1_067860	join(<41631..41998,42101..>42860)	Acanthamoeba castellanii str. Neff	14924176
ACA1_067870	mRNA	ACA1_067870	NW_004457654.1	43330	44853	D	ACA1_067870	join(<43330..43429,43526..43662,43848..43964,44023..44214,44260..44367,44445..44565,44840..>44853)	Acanthamoeba castellanii str. Neff	14924177
ACA1_067880	mRNA	ACA1_067880	NW_004457654.1	45692	49206	D	ACA1_067880	join(<45692..45770,45888..46287,46391..47354,47452..48553,48630..48697,48805..49001,49083..>49206)	Acanthamoeba castellanii str. Neff	14924178
ACA1_067890	mRNA	ACA1_067890	NW_004457654.1	49289	52195	R	ACA1_067890	complement(join(<49289..49655,49730..49817,49927..50019,50142..50265,50372..50449,50553..50687,50762..50850,50936..51024,51193..51316,51464..51591,51727..51835,51943..>52195))	Acanthamoeba castellanii str. Neff	14924179
ACA1_067900	mRNA	ACA1_067900	NW_004457654.1	52806	55543	R	ACA1_067900	complement(join(<52806..52897,52970..53237,53316..53493,53595..53861,53930..54054,54151..54302,54396..54479,54573..54638,54737..54887,55262..55316,55395..>55543))	Acanthamoeba castellanii str. Neff	14924180
ACA1_067910	mRNA	ACA1_067910	NW_004457654.1	55915	56424	R	ACA1_067910	complement(join(<55915..56163,56245..56305,56396..>56424))	Acanthamoeba castellanii str. Neff	14924181
ACA1_067920	mRNA	ACA1_067920	NW_004457654.1	56638	58107	D	ACA1_067920	join(<56638..56794,56869..57398,57486..57648,57749..>58107)	Acanthamoeba castellanii str. Neff	14924182
ACA1_067930	mRNA	ACA1_067930	NW_004457654.1	58927	62640	D	ACA1_067930	join(<58927..59306,59406..59492,59584..60137,60209..60254,60401..60972,61042..61311,61327..61396,61462..61609,61734..61744,61874..61941,62039..62131,62213..62319,62437..>62640)	Acanthamoeba castellanii str. Neff	14924183
ACA1_067940	mRNA	ACA1_067940	NW_004457654.1	62735	65600	D	ACA1_067940	join(<62735..62872,62950..63046,63147..63280,63424..63633,63718..64778,65009..>65600)	Acanthamoeba castellanii str. Neff	14924184
ACA1_067950	mRNA	ACA1_067950	NW_004457654.1	66081	68441	D	ACA1_067950	join(<66081..66210,66374..66465,66576..66628,66743..67084,67175..67676,67746..>68441)	Acanthamoeba castellanii str. Neff	14924185
ACA1_067960	mRNA	ACA1_067960	NW_004457654.1	68569	69678	R	ACA1_067960	complement(<68569..>69678)	Acanthamoeba castellanii str. Neff	14924186
ACA1_067970	mRNA	ACA1_067970	NW_004457654.1	69828	72211	R	ACA1_067970	complement(join(<69828..69896,69999..70209,70305..70457,70535..70650,70779..71004,71096..71185,71349..71416,71495..71971,72044..>72211))	Acanthamoeba castellanii str. Neff	14924187
ACA1_067980	mRNA	ACA1_067980	NW_004457654.1	73034	73696	R	ACA1_067980	complement(join(<73034..73063,73101..73244,73331..73384,73444..73539,73658..>73696))	Acanthamoeba castellanii str. Neff	14924188
ACA1_067990	mRNA	ACA1_067990	NW_004457654.1	74548	76079	R	ACA1_067990	complement(join(<74548..74590,74647..74800,75056..75096,75155..75275,75330..75963,76020..>76079))	Acanthamoeba castellanii str. Neff	14924189
ACA1_068000	mRNA	ACA1_068000	NW_004457654.1	76722	77259	R	ACA1_068000	complement(join(<76722..76825,76885..77095,77164..>77259))	Acanthamoeba castellanii str. Neff	14924190
ACA1_068010	mRNA	ACA1_068010	NW_004457654.1	79512	79884	R	ACA1_068010	complement(join(<79512..79615,79695..>79884))	Acanthamoeba castellanii str. Neff	14924191
ACA1_068020	mRNA	ACA1_068020	NW_004457654.1	80566	82195	D	ACA1_068020	join(<80566..81382,81460..81792,81962..82017,82070..>82195)	Acanthamoeba castellanii str. Neff	14924713
ACA1_068030	mRNA	ACA1_068030	NW_004457654.1	82300	83739	D	ACA1_068030	join(<82300..82370,82443..82663,82746..82806,82879..83047,83115..83289,83381..>83739)	Acanthamoeba castellanii str. Neff	14924192
ACA1_068040	mRNA	ACA1_068040	NW_004457654.1	84050	87474	D	ACA1_068040	join(<84050..84117,84215..84431,84506..84590,84659..84718,84800..85068,85144..85203,85283..85454,85533..85721,85802..85877,85971..86162,86252..86390,86494..>87474)	Acanthamoeba castellanii str. Neff	14924193
ACA1_068050	mRNA	ACA1_068050	NW_004457654.1	87659	96089	R	ACA1_068050	complement(join(<87659..87718,87979..88277,88353..88565,88639..88858,88964..89139,89253..89394,89479..89583,89663..89797,89929..90088,90175..90302,90393..90647,90786..90903,91007..91138,91240..91349,91473..91793,91869..92002,92082..92253,92331..92513,92600..92758,92840..93025,93104..93204,93289..93369,93459..93626,93707..93851,93945..94099,94186..94308,94403..94518,94592..94779,94866..95009,95086..95247,95350..95493,95598..95663,95734..95981,96047..>96089))	Acanthamoeba castellanii str. Neff	14924194
ACA1_068060	mRNA	ACA1_068060	NW_004457654.1	96434	98618	D	ACA1_068060	join(<96434..96644,96730..>98618)	Acanthamoeba castellanii str. Neff	14924195
ACA1_068070	mRNA	ACA1_068070	NW_004457654.1	99035	99854	D	ACA1_068070	join(<99035..99197,99260..99319,99394..>99854)	Acanthamoeba castellanii str. Neff	14924196
ACA1_068080	mRNA	ACA1_068080	NW_004457654.1	100116	103272	D	ACA1_068080	join(<100116..100227,100301..100323,100457..100600,100688..100950,101135..101257,101349..101481,101600..101679,101806..102183,102314..102393,102474..102571,102671..102798,102875..103027,103122..>103272)	Acanthamoeba castellanii str. Neff	14924197
ACA1_068090	mRNA	ACA1_068090	NW_004457654.1	103520	108995	R	ACA1_068090	complement(join(<103520..103657,103753..103848,103919..104076,104144..104253,104434..104538,104626..104737,104820..104982,105068..105365,105472..105592,105715..105808,105889..105982,106084..106593,106666..107084,107157..107292,107373..107445,107538..107637,107804..107863,107883..107923,108035..108092,108174..108412,108495..108628,108737..108825,108945..>108995))	Acanthamoeba castellanii str. Neff	14924198
ACA1_068100	mRNA	ACA1_068100	NW_004457654.1	109458	110126	R	ACA1_068100	complement(join(<109458..109566,109649..109761,109830..109958,110028..>110126))	Acanthamoeba castellanii str. Neff	14924199
ACA1_068110	mRNA	ACA1_068110	NW_004457654.1	110289	111024	D	ACA1_068110	join(<110289..110540,110612..110672,110732..110857,110921..>111024)	Acanthamoeba castellanii str. Neff	14924200
ACA1_068120	mRNA	ACA1_068120	NW_004457654.1	111369	112865	D	ACA1_068120	join(<111369..111667,111758..111854,111935..112027,112141..112208,112333..112432,112510..112614,112710..>112865)	Acanthamoeba castellanii str. Neff	14924201
ACA1_068130	mRNA	ACA1_068130	NW_004457654.1	113152	115491	R	ACA1_068130	complement(join(<113152..113977,114130..115257,115478..>115491))	Acanthamoeba castellanii str. Neff	14924202
ACA1_068140	mRNA	ACA1_068140	NW_004457654.1	115786	117477	R	ACA1_068140	complement(<115786..>117477)	Acanthamoeba castellanii str. Neff	14924203
ACA1_068150	mRNA	ACA1_068150	NW_004457654.1	117960	120541	D	ACA1_068150	join(<117960..118059,118225..118399,118496..118692,118797..118900,118992..119127,119197..119319,119405..119527,119661..119813,119983..120129,120207..120320,120432..>120541)	Acanthamoeba castellanii str. Neff	14924204
ACA1_068160	mRNA	ACA1_068160	NW_004457654.1	120850	125841	R	ACA1_068160	complement(join(<120850..121266,121386..121444,121542..121603,121743..121872,121976..122117,122427..122491,122604..122686,122775..122887,122982..123064,123164..123396,123471..123625,123862..123938,124033..124187,124288..124436,124539..124645,124774..124911,125024..125127,125158..125433,125478..125560,125674..>125841))	Acanthamoeba castellanii str. Neff	14924205
ACA1_068170	mRNA	ACA1_068170	NW_004457654.1	126048	126866	D	ACA1_068170	join(<126048..126118,126199..126322,126436..126561,126645..>126866)	Acanthamoeba castellanii str. Neff	14924206
ACA1_068180	mRNA	ACA1_068180	NW_004457654.1	127132	130745	D	ACA1_068180	join(<127132..127300,127317..127373,127452..127528,127614..127871,127966..128087,128192..128268,128356..128432,128504..128614,128688..128834,128926..129063,129162..129245,129377..129451,129543..129645,129737..129882,129967..130079,130164..130293,130377..130505,130602..>130745)	Acanthamoeba castellanii str. Neff	14924207
ACA1_068190	mRNA	ACA1_068190	NW_004457654.1	130910	135396	R	ACA1_068190	complement(join(<130910..131187,131273..131599,131705..131819,131901..132012,132097..132241,132329..132419,132492..132656,132745..132925,133009..133134,133222..133684,133761..133940,134008..134164,134235..134294,134363..134503,134585..134684,134758..134891,135052..135122,135234..>135396))	Acanthamoeba castellanii str. Neff	14924208
ACA1_068200	mRNA	ACA1_068200	NW_004457654.1	136170	136659	D	ACA1_068200	join(<136170..136271,136419..136482,136541..>136659)	Acanthamoeba castellanii str. Neff	14924209
ACA1_068210	mRNA	ACA1_068210	NW_004457654.1	136907	138288	D	ACA1_068210	join(<136907..136933,136983..137015,137291..137303,137449..137519,137587..137620,137676..137752,137820..138011,138247..>138288)	Acanthamoeba castellanii str. Neff	14924210
ACA1_068220	mRNA	ACA1_068220	NW_004457654.1	138577	140257	D	ACA1_068220	join(<138577..138638,138699..138886,139087..139157,139226..139283,139339..139432,139494..139625,139692..139715,139781..140118,140193..>140257)	Acanthamoeba castellanii str. Neff	14924211
ACA1_068230	mRNA	ACA1_068230	NW_004457654.1	140320	142187	R	ACA1_068230	complement(join(<140320..140558,140646..140917,140991..141096,141244..141348,141433..141492,141581..141677,141753..141838,141932..>142187))	Acanthamoeba castellanii str. Neff	14924212
ACA1_068240	mRNA	ACA1_068240	NW_004457654.1	142532	143871	D	ACA1_068240	join(<142532..142889,143016..143294,143375..143595,143716..>143871)	Acanthamoeba castellanii str. Neff	14924213
ACA1_068250	mRNA	ACA1_068250	NW_004457654.1	144576	146976	D	ACA1_068250	join(<144576..144731,144894..145078,145152..145353,145439..145566,145674..145878,146165..146321,146481..146634,146690..146709,146789..>146976)	Acanthamoeba castellanii str. Neff	14924214
ACA1_068260	mRNA	ACA1_068260	NW_004457654.1	147055	148063	D	ACA1_068260	join(<147055..147233,147298..147536,147630..147759,147871..>148063)	Acanthamoeba castellanii str. Neff	14924215
ACA1_068270	mRNA	ACA1_068270	NW_004457654.1	148207	154262	R	ACA1_068270	complement(join(<148207..148327,148394..148496,148597..148687,148835..148948,149046..149106,149184..149311,149420..149566,149682..149987,150091..150679,150777..150887,150982..151180,151268..151558,151661..151712,151743..152118,152187..152401,152516..152633,152702..152784,152883..152993,153093..153162,153245..153378,153461..153550,153652..153698,153720..153831,153928..154134,154203..>154262))	Acanthamoeba castellanii str. Neff	14924216
ACA1_068280	mRNA	ACA1_068280	NW_004457654.1	154404	155359	R	ACA1_068280	complement(join(<154404..154556,154625..155004,155069..155193,155256..>155359))	Acanthamoeba castellanii str. Neff	14924217
ACA1_068290	mRNA	ACA1_068290	NW_004457654.1	155439	155939	R	ACA1_068290	complement(join(<155439..155467,155482..155668,155730..>155939))	Acanthamoeba castellanii str. Neff	14924218
ACA1_068300	mRNA	ACA1_068300	NW_004457654.1	156112	157246	D	ACA1_068300	join(<156112..156324,156387..156474,156572..156606,156677..156817,156910..156969,157124..>157246)	Acanthamoeba castellanii str. Neff	14924219
ACA1_068310	mRNA	ACA1_068310	NW_004457654.1	157413	158464	D	ACA1_068310	join(<157413..157604,157674..157775,157843..157956,158019..158126,158201..>158464)	Acanthamoeba castellanii str. Neff	14924220
ACA1_068320	mRNA	ACA1_068320	NW_004457654.1	159303	169460	R	ACA1_068320	complement(join(<159303..159512,159633..160554,160671..160863,160967..161763,161829..163113,163222..163296,163404..164779,164852..165809,165899..166013,166080..166201,166277..166391,166457..166666,166757..166924,167010..167134,167222..167418,167511..167748,167828..167896,167970..168080,168161..168280,168379..168498,168669..168836,168929..>169460))	Acanthamoeba castellanii str. Neff	14924221
ACA1_068330	mRNA	ACA1_068330	NW_004457654.1	170077	174920	R	ACA1_068330	complement(join(<170077..170458,170564..170784,170860..171058,171112..171430,171527..171659,171743..171816,171930..172259,172326..172451,172541..172589,172791..172869,172938..173116,173413..173592,173656..173708,173779..173849,173948..174075,174163..174291,174492..>174920))	Acanthamoeba castellanii str. Neff	14924222
ACA1_068340	mRNA	ACA1_068340	NW_004457654.1	175438	176879	R	ACA1_068340	complement(join(<175438..175620,175696..175805,175879..175938,176003..176090,176161..176252,176321..176684,176760..>176879))	Acanthamoeba castellanii str. Neff	14924223
ACA1_068350	mRNA	ACA1_068350	NW_004457654.1	177097	178377	D	ACA1_068350	join(<177097..177206,177292..177385,177469..177576,177651..177785,177856..177934,178007..178101,178174..>178377)	Acanthamoeba castellanii str. Neff	14924224
ACA1_068360	mRNA	ACA1_068360	NW_004457654.1	179002	181944	D	ACA1_068360	join(<179002..179043,179133..179230,179334..179423,179498..179670,179762..179873,180006..180207,180294..180385,180459..180561,180640..180760,180844..180971,181060..181092,181169..181269,181349..181458,181559..>181944)	Acanthamoeba castellanii str. Neff	14924225
ACA1_068370	mRNA	ACA1_068370	NW_004457654.1	182834	184030	D	ACA1_068370	join(<182834..182884,182975..>184030)	Acanthamoeba castellanii str. Neff	14924226
ACA1_068380	mRNA	ACA1_068380	NW_004457654.1	184455	185433	R	ACA1_068380	complement(join(<184455..184661,184838..184922,185160..185252,185321..>185433))	Acanthamoeba castellanii str. Neff	14924227
ACA1_068390	mRNA	ACA1_068390	NW_004457654.1	185912	187222	R	ACA1_068390	complement(join(<185912..186378,186481..186577,186660..186759,186846..187023,187135..>187222))	Acanthamoeba castellanii str. Neff	14924228
ACA1_068400	mRNA	ACA1_068400	NW_004457654.1	187353	188009	D	ACA1_068400	<187353..>188009	Acanthamoeba castellanii str. Neff	14924229
ACA1_068410	mRNA	ACA1_068410	NW_004457654.1	188174	189897	R	ACA1_068410	complement(join(<188174..188563,188688..189095,189201..189318,189404..>189897))	Acanthamoeba castellanii str. Neff	14924230
ACA1_068420	mRNA	ACA1_068420	NW_004457654.1	190056	192516	D	ACA1_068420	join(<190056..190415,190520..190918,191013..191147,191204..191305,191392..192011,192124..192279,192357..>192516)	Acanthamoeba castellanii str. Neff	14924231
ACA1_068430	mRNA	ACA1_068430	NW_004457654.1	192559	193984	R	ACA1_068430	complement(join(<192559..192719,192853..192994,193078..193160,193242..193356,193436..193499,193611..193722,193813..>193984))	Acanthamoeba castellanii str. Neff	14924232
ACA1_068440	mRNA	ACA1_068440	NW_004457654.1	194090	195857	D	ACA1_068440	join(<194090..194224,194329..194803,194854..195006,195083..195180,195273..195393,195465..195541,195606..195676,195761..>195857)	Acanthamoeba castellanii str. Neff	14924233
ACA1_068450	mRNA	ACA1_068450	NW_004457654.1	196021	198795	R	ACA1_068450	complement(join(<196021..196269,196352..196436,196522..196741,196831..196974,197097..197156,197227..197386,197479..197649,197729..197838,197950..198159,198266..198398,198472..198633,198733..>198795))	Acanthamoeba castellanii str. Neff	14924234
ACA1_068460	mRNA	ACA1_068460	NW_004457654.1	199414	207574	R	ACA1_068460	complement(join(<199414..199575,199667..199789,199892..200011,200127..200369,200495..200698,200789..200933,201012..201198,201300..201503,201592..201768,201844..202041,202140..202236,202336..202458,202567..202678,202807..203170,203260..203472,203552..203660,203783..203932,204019..204093,204192..204305,204415..204533,204617..204722,204797..204954,205039..205168,205266..205360,205470..205601,205690..205883,205969..206309,206424..206534,206644..206795,206905..>207574))	Acanthamoeba castellanii str. Neff	14924235
ACA1_068470	mRNA	ACA1_068470	NW_004457654.1	208351	210115	R	ACA1_068470	complement(join(<208351..208467,208584..208703,208805..209144,209262..209523,209613..209750,209851..210019,210086..>210115))	Acanthamoeba castellanii str. Neff	14924236
ACA1_068480	mRNA	ACA1_068480	NW_004457654.1	210143	212982	R	ACA1_068480	complement(join(<210143..210182,210229..210787,210865..211462,211536..211658,211765..>212982))	Acanthamoeba castellanii str. Neff	14924237
ACA1_068490	mRNA	ACA1_068490	NW_004457654.1	213520	215992	R	ACA1_068490	complement(join(<213520..213746,213809..213899,213979..214049,214163..214283,214350..214472,214672..214715,214793..214905,214977..215252,215344..215455,215541..215696,215776..>215992))	Acanthamoeba castellanii str. Neff	14924238
ACA1_068500	mRNA	ACA1_068500	NW_004457654.1	216178	218106	D	ACA1_068500	join(<216178..216341,216445..216634,216730..216885,216973..217120,217205..217515,217602..217752,217826..>218106)	Acanthamoeba castellanii str. Neff	14924239
ACA1_068510	mRNA	ACA1_068510	NW_004457654.1	218483	219860	R	ACA1_068510	complement(join(<218483..219358,219483..>219860))	Acanthamoeba castellanii str. Neff	14924240
ACA1_068520	mRNA	ACA1_068520	NW_004457654.1	220716	225043	D	ACA1_068520	join(<220716..220934,221008..221145,221247..221354,221630..221704,221789..221897,221951..222304,222430..222561,222681..223294,223398..223483,223559..223631,223677..223801,223889..223976,224224..224304,224493..224832,224943..>225043)	Acanthamoeba castellanii str. Neff	14924241
ACA1_068530	mRNA	ACA1_068530	NW_004457654.1	225254	228434	R	ACA1_068530	complement(join(<225254..225328,225409..225660,225873..225974,226072..226384,226475..226572,226676..226813,226979..227238,227295..227477,227570..>228434))	Acanthamoeba castellanii str. Neff	14924242
ACA1_068540	mRNA	ACA1_068540	NW_004457654.1	229323	229898	D	ACA1_068540	join(<229323..229457,229572..>229898)	Acanthamoeba castellanii str. Neff	14924243
ACA1_068550	mRNA	ACA1_068550	NW_004457654.1	230303	230827	R	ACA1_068550	complement(join(<230303..230401,230477..230553,230640..230738,230791..>230827))	Acanthamoeba castellanii str. Neff	14924244
ACA1_068560	mRNA	ACA1_068560	NW_004457654.1	230876	231340	R	ACA1_068560	complement(join(<230876..231015,231091..>231340))	Acanthamoeba castellanii str. Neff	14924245
ACA1_068570	mRNA	ACA1_068570	NW_004457654.1	231597	232393	R	ACA1_068570	complement(join(<231597..231691,231736..>232393))	Acanthamoeba castellanii str. Neff	14924246
ACA1_068580	mRNA	ACA1_068580	NW_004457654.1	232623	233793	R	ACA1_068580	complement(join(<232623..233255,233329..>233793))	Acanthamoeba castellanii str. Neff	14924247
ACA1_068590	mRNA	ACA1_068590	NW_004457654.1	234013	235873	R	ACA1_068590	complement(join(<234013..234303,234383..234519,234593..234696,234955..235035,235118..235214,235294..235374,235460..235568,235688..>235873))	Acanthamoeba castellanii str. Neff	14924248
ACA1_068600	mRNA	ACA1_068600	NW_004457654.1	236343	236534	D	ACA1_068600	<236343..>236534	Acanthamoeba castellanii str. Neff	14924249
ACA1_068610	mRNA	ACA1_068610	NW_004457654.1	236747	238050	R	ACA1_068610	complement(join(<236747..236908,236983..237156,237241..>238050))	Acanthamoeba castellanii str. Neff	14924250
ACA1_068620	mRNA	ACA1_068620	NW_004457654.1	238300	242210	R	ACA1_068620	complement(join(<238300..238624,238716..238849,239094..239316,239417..239817,239921..240046,240150..240313,240408..240525,240639..240766,240844..240917,241035..241137,241217..241302,241399..241536,241636..241745,241844..241992,242159..>242210))	Acanthamoeba castellanii str. Neff	14924251
ACA1_068630	mRNA	ACA1_068630	NW_004457654.1	242931	243753	D	ACA1_068630	join(<242931..243205,243300..>243753)	Acanthamoeba castellanii str. Neff	14924252
ACA1_068640	mRNA	ACA1_068640	NW_004457654.1	244036	245770	D	ACA1_068640	join(<244036..244238,244332..244473,244570..244743,244814..245008,245083..245188,245262..245464,245537..245676,245734..>245770)	Acanthamoeba castellanii str. Neff	14924253
ACA1_068650	mRNA	ACA1_068650	NW_004457654.1	246218	249260	D	ACA1_068650	join(<246218..246513,246561..246592,246673..246968,247052..247108,247190..247292,247373..247550,247622..247841,247921..248163,248251..248514,248585..248708,248775..248960,249082..>249260)	Acanthamoeba castellanii str. Neff	14924254
ACA1_068660	mRNA	ACA1_068660	NW_004457654.1	249445	251915	D	ACA1_068660	join(<249445..249707,249769..249956,250226..250291,250365..250527,250654..250768,250876..250969,251068..251373,251452..251595,251674..>251915)	Acanthamoeba castellanii str. Neff	14924255
ACA1_068670	mRNA	ACA1_068670	NW_004457654.1	252035	255006	R	ACA1_068670	complement(join(<252035..252097,252192..252281,252357..252433,252752..252913,253012..253171,253254..253452,253543..253631,253916..254017,254106..254249,254329..254429,254499..254634,254703..254788,254892..>255006))	Acanthamoeba castellanii str. Neff	14924256
ACA1_068680	mRNA	ACA1_068680	NW_004457654.1	255268	255760	D	ACA1_068680	join(<255268..255270,255420..255631,255697..>255760)	Acanthamoeba castellanii str. Neff	14924257
ACA1_068690	mRNA	ACA1_068690	NW_004457654.1	255836	256107	R	ACA1_068690	complement(join(<255836..256010,256073..>256107))	Acanthamoeba castellanii str. Neff	14924258
ACA1_068700	mRNA	ACA1_068700	NW_004457654.1	256634	259455	D	ACA1_068700	join(<256634..256698,256753..256826,256890..257098,257283..257355,257430..257528,257608..257668,257769..257873,257969..258101,258164..258233,258307..258400,258479..258575,258650..258710,258784..258915,258993..259077,259171..259259,259352..>259455)	Acanthamoeba castellanii str. Neff	14924259
ACA1_068710	mRNA	ACA1_068710	NW_004457654.1	260045	262268	D	ACA1_068710	join(<260045..260123,260342..260458,260525..260617,260694..260812,260882..261038,261131..261206,261282..261362,261432..261495,261560..261686,261760..261840,261916..262019,262104..>262268)	Acanthamoeba castellanii str. Neff	14924260
ACA1_068720	mRNA	ACA1_068720	NW_004457654.1	263191	265898	D	ACA1_068720	join(<263191..263264,263335..263416,263488..263553,263642..263777,263988..264071,264160..264311,264426..264550,264623..264755,264998..265074,265162..265270,265367..265469,265557..265640,265726..265794,265819..>265898)	Acanthamoeba castellanii str. Neff	14924261
ACA1_068730	mRNA	ACA1_068730	NW_004457654.1	266468	267053	D	ACA1_068730	join(<266468..266572,266665..266878,266947..>267053)	Acanthamoeba castellanii str. Neff	14924262
ACA1_068740	mRNA	ACA1_068740	NW_004457654.1	267350	269246	D	ACA1_068740	join(<267350..267386,267469..267538,267634..267805,267891..267992,268087..268490,268561..268724,268798..268918,269006..>269246)	Acanthamoeba castellanii str. Neff	14924263
ACA1_068750	mRNA	ACA1_068750	NW_004457654.1	269696	270070	R	ACA1_068750	complement(<269696..>270070)	Acanthamoeba castellanii str. Neff	14924264
ACA1_068760	mRNA	ACA1_068760	NW_004457654.1	270567	272951	D	ACA1_068760	join(<270567..270658,270731..270840,270941..271093,271185..271360,271394..271503,271574..271733,271823..271879,272011..272053,272129..272368,272449..272526,272597..272691,272769..>272951)	Acanthamoeba castellanii str. Neff	14924265
ACA1_068770	mRNA	ACA1_068770	NW_004457654.1	273005	274347	R	ACA1_068770	complement(join(<273005..273571,273715..274128,274258..>274347))	Acanthamoeba castellanii str. Neff	14924266
ACA1_068780	mRNA	ACA1_068780	NW_004457654.1	274587	276610	R	ACA1_068780	complement(join(<274587..274684,274775..274820,274902..275019,275104..275186,275270..275366,275453..275578,275660..275715,275842..276017,276087..276245,276273..276407,276484..>276610))	Acanthamoeba castellanii str. Neff	14924267
ACA1_068790	mRNA	ACA1_068790	NW_004457654.1	277066	277383	D	ACA1_068790	join(<277066..277157,277254..>277383)	Acanthamoeba castellanii str. Neff	14924268
ACA1_068800	mRNA	ACA1_068800	NW_004457654.1	277512	282599	R	ACA1_068800	complement(join(<277512..277810,277913..278059,278151..278276,278374..278504,278587..278703,278815..278918,278997..279140,279228..279388,279452..279604,279684..279843,279927..280073,280159..280611,280696..280872,280967..281088,281118..281729,281798..282180,282233..282307,282508..>282599))	Acanthamoeba castellanii str. Neff	14924269
ACA1_068810	mRNA	ACA1_068810	NW_004457654.1	283193	284786	D	ACA1_068810	join(<283193..283731,283837..284226,284337..284421,284496..>284786)	Acanthamoeba castellanii str. Neff	14924270
ACA1_068820	mRNA	ACA1_068820	NW_004457654.1	285332	292008	D	ACA1_068820	join(<285332..285541,285584..285675,285790..285884,285959..286077,286190..286285,286369..286566,286643..286748,286830..286885,286951..287043,287144..287215,287299..287391,287474..287581,287690..287812,287898..288064,288152..288288,288377..288510,288606..288752,288838..288950,289018..289083,289171..289303,289388..289494,289585..289772,289851..289942,290026..290152,290239..290343,290418..290749,290884..291106,291146..291237,291314..291468,291541..291701,291950..>292008)	Acanthamoeba castellanii str. Neff	14924271
ACA1_068830	mRNA	ACA1_068830	NW_004457654.1	292303	297755	D	ACA1_068830	join(<292303..292497,292604..292687,292812..292915,292985..293049,293133..293293,293398..293541,293641..293747,293829..293896,293983..294222,294293..294533,294609..294691,294814..294912,294987..295079,295113..295331,295426..295882,296005..296090,296185..296286,296388..296535,296614..296765,296890..297020,297087..297261,297354..297458,297568..>297755)	Acanthamoeba castellanii str. Neff	14924272
ACA1_068840	mRNA	ACA1_068840	NW_004457654.1	297829	298854	R	ACA1_068840	complement(join(<297829..297993,298050..298306,298400..298609,298731..>298854))	Acanthamoeba castellanii str. Neff	14924273
ACA1_068850	mRNA	ACA1_068850	NW_004457654.1	299016	300386	R	ACA1_068850	complement(<299016..>300386)	Acanthamoeba castellanii str. Neff	14924274
ACA1_068860	mRNA	ACA1_068860	NW_004457654.1	301281	302693	D	ACA1_068860	<301281..>302693	Acanthamoeba castellanii str. Neff	14924275
ACA1_068870	mRNA	ACA1_068870	NW_004457654.1	302902	304304	D	ACA1_068870	join(<302902..303716,303808..303892,303963..304094,304167..>304304)	Acanthamoeba castellanii str. Neff	14924276
ACA1_068880	mRNA	ACA1_068880	NW_004457654.1	304422	307914	D	ACA1_068880	join(<304422..304433,304530..304628,304699..304812,304877..304996,305071..305196,305287..305512,305592..305737,305821..>307914)	Acanthamoeba castellanii str. Neff	14924277
ACA1_068890	mRNA	ACA1_068890	NW_004457654.1	308086	308985	D	ACA1_068890	join(<308086..308100,308173..308344,308561..308712,308839..>308985)	Acanthamoeba castellanii str. Neff	14924278
ACA1_068900	mRNA	ACA1_068900	NW_004457654.1	309116	311195	D	ACA1_068900	join(<309116..309357,309426..309561,309751..309909,310226..310310,310509..310591,310669..310796,310879..310990,311079..>311195)	Acanthamoeba castellanii str. Neff	14924279
ACA1_068910	mRNA	ACA1_068910	NW_004457654.1	311582	311868	D	ACA1_068910	join(<311582..311616,311682..>311868)	Acanthamoeba castellanii str. Neff	14924280
ACA1_068920	mRNA	ACA1_068920	NW_004457654.1	311919	313750	D	ACA1_068920	join(<311919..311985,312064..312129,312213..312327,312413..312527,312603..312659,312808..312968,313042..313199,313270..313416,313491..>313750)	Acanthamoeba castellanii str. Neff	14924281
ACA1_068930	mRNA	ACA1_068930	NW_004457654.1	313849	315312	D	ACA1_068930	<313849..>315312	Acanthamoeba castellanii str. Neff	14924282
ACA1_068940	mRNA	ACA1_068940	NW_004457654.1	315378	315659	R	ACA1_068940	complement(<315378..>315659)	Acanthamoeba castellanii str. Neff	14924283
ACA1_068950	mRNA	ACA1_068950	NW_004457654.1	315894	317666	D	ACA1_068950	join(<315894..315939,316029..316167,316285..316421,316627..316726,316824..316901,316990..317063,317142..317227,317352..>317666)	Acanthamoeba castellanii str. Neff	14924284
ACA1_068960	mRNA	ACA1_068960	NW_004457654.1	317864	322104	R	ACA1_068960	complement(join(<317864..318530,318661..318754,318872..319028,319106..319230,319302..319359,319437..319500,319577..319825,319914..320230,320351..320430,320505..320601,320685..320790,320922..321132,321199..321534,321608..321744,321857..>322104))	Acanthamoeba castellanii str. Neff	14924285
ACA1_068970	mRNA	ACA1_068970	NW_004457654.1	322696	325541	R	ACA1_068970	complement(join(<322696..322839,322929..323033,323113..323184,323256..323414,323495..323514,323657..323749,323823..323905,323948..324048,324120..324808,324888..324977,325304..>325541))	Acanthamoeba castellanii str. Neff	14924286
ACA1_068980	mRNA	ACA1_068980	NW_004457654.1	326290	329478	D	ACA1_068980	join(<326290..326350,326382..326509,326588..326654,326726..326847,326913..326969,327086..327224,327471..327619,327714..327804,327874..327931,328051..328127,328240..328336,328441..328698,328830..328914,329023..329124,329194..329295,329380..>329478)	Acanthamoeba castellanii str. Neff	14924287
ACA1_068990	mRNA	ACA1_068990	NW_004457654.1	329930	331151	R	ACA1_068990	complement(join(<329930..330202,330288..330368,330411..>331151))	Acanthamoeba castellanii str. Neff	14924288
ACA1_069000	mRNA	ACA1_069000	NW_004457654.1	331368	331949	R	ACA1_069000	complement(join(<331368..331486,331605..331706,331787..>331949))	Acanthamoeba castellanii str. Neff	14924289
ACA1_069010	mRNA	ACA1_069010	NW_004457654.1	332323	342061	R	ACA1_069010	complement(join(<332323..332444,332523..332703,332775..332909,333014..333051,333174..333250,333346..333402,333503..333574,333687..333801,333890..333938,334026..334077,334162..334247,334321..334529,334644..334731,334832..334957,335084..335186,335276..335408,335504..335640,335659..335696,335805..335905,335983..336093,336168..336249,336374..336653,336758..336945,337026..337094,337324..337439,337526..337648,337755..337872,337965..338053,338131..338185,338259..338329,338414..338651,338748..338913,339028..339149,339214..339310,339413..339699,339796..339863,339941..340235,340329..340474,340566..340696,340794..340929,341006..341054,341122..341207,341308..341365,341454..341638,341722..341854,341941..342038,342049..>342061))	Acanthamoeba castellanii str. Neff	14924290
ACA1_069020	mRNA	ACA1_069020	NW_004457654.1	342505	343743	R	ACA1_069020	complement(join(<342505..342688,342785..342830,342897..343015,343094..343149,343169..343233,343432..343538,343604..>343743))	Acanthamoeba castellanii str. Neff	14924291
ACA1_069030	mRNA	ACA1_069030	NW_004457654.1	344059	344322	D	ACA1_069030	<344059..>344322	Acanthamoeba castellanii str. Neff	14924292
ACA1_069040	mRNA	ACA1_069040	NW_004457654.1	344446	345243	D	ACA1_069040	join(<344446..344519,344644..344868,344906..345029,345106..>345243)	Acanthamoeba castellanii str. Neff	14924293
ACA1_069050	mRNA	ACA1_069050	NW_004457654.1	345333	346363	R	ACA1_069050	complement(join(<345333..345732,345801..345920,345978..346063,346118..346167,346261..>346363))	Acanthamoeba castellanii str. Neff	14924294
ACA1_069060	mRNA	ACA1_069060	NW_004457654.1	346629	347126	D	ACA1_069060	join(<346629..346886,346905..>347126)	Acanthamoeba castellanii str. Neff	14924295
ACA1_069070	mRNA	ACA1_069070	NW_004457654.1	347221	348405	R	ACA1_069070	complement(join(<347221..347374,347450..347637,347703..347776,347850..347978,348061..348205,348268..>348405))	Acanthamoeba castellanii str. Neff	14924296
ACA1_069080	mRNA	ACA1_069080	NW_004457654.1	349760	353292	D	ACA1_069080	join(<349760..349797,349862..349931,350009..350051,350119..350186,350339..350666,350741..350845,350941..351436,351512..351569,351676..351780,351868..352057,352116..352297,352370..352429,352531..352576,352841..352929,353012..353086,353218..>353292)	Acanthamoeba castellanii str. Neff	14924297
ACA1_069090	mRNA	ACA1_069090	NW_004457654.1	353423	353956	R	ACA1_069090	complement(<353423..>353956)	Acanthamoeba castellanii str. Neff	14924298
ACA1_069100	mRNA	ACA1_069100	NW_004457654.1	354388	356286	D	ACA1_069100	join(<354388..354480,354538..354645,354737..354805,354893..355004,355095..355208,355280..355344,355438..355575,355667..355745,355827..355905,356139..>356286)	Acanthamoeba castellanii str. Neff	14924299
ACA1_069110	mRNA	ACA1_069110	NW_004457654.1	356892	358007	D	ACA1_069110	join(<356892..356963,357145..357200,357470..357652,357746..>358007)	Acanthamoeba castellanii str. Neff	14924300
ACA1_069120	mRNA	ACA1_069120	NW_004457654.1	359228	361466	R	ACA1_069120	complement(join(<359228..359395,359474..359572,359648..359713,359810..359923,360069..360194,360316..360591,360708..360771,360914..361014,361104..361241,361374..>361466))	Acanthamoeba castellanii str. Neff	14924301
ACA1_069130	mRNA	ACA1_069130	NW_004457654.1	362148	363212	D	ACA1_069130	join(<362148..362259,362353..>363212)	Acanthamoeba castellanii str. Neff	14924302
ACA1_069140	mRNA	ACA1_069140	NW_004457654.1	363717	365242	R	ACA1_069140	complement(join(<363717..364577,364655..364875,364940..365066,365234..>365242))	Acanthamoeba castellanii str. Neff	14924303
ACA1_069150	mRNA	ACA1_069150	NW_004457654.1	365804	367801	D	ACA1_069150	join(<365804..365943,366056..366155,366260..366361,366451..367401,367478..367644,367720..>367801)	Acanthamoeba castellanii str. Neff	14924304
ACA1_069160	mRNA	ACA1_069160	NW_004457654.1	368515	372311	D	ACA1_069160	join(<368515..368740,368934..369055,369151..369237,369325..369418,369492..369561,369625..369729,369864..369991,370079..370146,370254..370541,370630..370734,370841..370934,371062..371147,371243..371370,371425..371446,371510..371666,371752..371843,371947..372051,372126..>372311)	Acanthamoeba castellanii str. Neff	14924305
ACA1_069170	mRNA	ACA1_069170	NW_004457654.1	372441	376352	R	ACA1_069170	complement(join(<372441..372743,372846..372932,373038..373280,373379..373518,373601..373940,374192..374270,374364..374479,374599..374775,374890..375007,375109..375293,375409..375483,375601..375675,375913..376002,376176..>376352))	Acanthamoeba castellanii str. Neff	14924306
ACA1_069180	mRNA	ACA1_069180	NW_004457654.1	376807	377094	R	ACA1_069180	complement(<376807..>377094)	Acanthamoeba castellanii str. Neff	14924307
ACA1_069190	mRNA	ACA1_069190	NW_004457654.1	377505	379273	D	ACA1_069190	join(<377505..377594,377664..377964,378035..378149,378218..378298,378374..378556,378626..378800,378869..378968,379038..379154,379242..>379273)	Acanthamoeba castellanii str. Neff	14924308
ACA1_069200	mRNA	ACA1_069200	NW_004457654.1	379700	383506	D	ACA1_069200	join(<379700..380260,380457..380521,380623..380714,380824..380995,381127..381380,381452..381549,381665..381767,381860..381921,382085..382291,382412..382563,382695..382799,382893..383135,383230..383273,383305..383368,383452..>383506)	Acanthamoeba castellanii str. Neff	14924309
ACA1_069210	mRNA	ACA1_069210	NW_004457654.1	383669	384821	R	ACA1_069210	complement(join(<383669..383908,383990..384310,384414..>384821))	Acanthamoeba castellanii str. Neff	14924310
ACA1_069220	mRNA	ACA1_069220	NW_004457654.1	385073	386640	R	ACA1_069220	complement(join(<385073..385349,385598..385859,385943..385988,386060..386173,386277..386363,386438..386500,386566..>386640))	Acanthamoeba castellanii str. Neff	14924311
ACA1_069230	mRNA	ACA1_069230	NW_004457654.1	386959	388729	D	ACA1_069230	join(<386959..387065,387123..387206,387306..387337,387400..387548,387610..387682,387760..387797,387869..387956,388022..388137,388209..388325,388402..388550,388633..>388729)	Acanthamoeba castellanii str. Neff	14924312
ACA1_069240	mRNA	ACA1_069240	NW_004457654.1	388890	390222	D	ACA1_069240	join(<388890..389082,389202..389234,389322..389377,389450..389560,389632..389723,389794..389908,390055..>390222)	Acanthamoeba castellanii str. Neff	14924313
ACA1_069250	mRNA	ACA1_069250	NW_004457654.1	390356	391473	D	ACA1_069250	join(<390356..390470,390642..390824,390990..391074,391119..>391473)	Acanthamoeba castellanii str. Neff	14924314
ACA1_069260	mRNA	ACA1_069260	NW_004457654.1	391524	396190	R	ACA1_069260	complement(join(<391524..391656,391731..391867,391928..391964,392045..392182,392261..392326,392441..392504,392568..392975,393091..393348,393446..393534,393627..393702,393773..393910,394012..394149,394237..394518,394617..394760,394873..394969,395046..395197,395288..395446,395559..395662,395786..395882,396010..>396190))	Acanthamoeba castellanii str. Neff	14924315
ACA1_069270	mRNA	ACA1_069270	NW_004457654.1	396726	399289	R	ACA1_069270	complement(join(<396726..396854,396936..397025,397099..397184,397251..397391,397496..397688,397768..397813,398061..398145,398217..398280,398354..398499,398620..398818,398914..398964,399031..399074,399187..>399289))	Acanthamoeba castellanii str. Neff	14924316
ACA1_069280	mRNA	ACA1_069280	NW_004457654.1	399977	401192	D	ACA1_069280	join(<399977..400175,400312..400480,400569..400699,400791..400873,400951..401047,401128..>401192)	Acanthamoeba castellanii str. Neff	14924317
ACA1_069290	mRNA	ACA1_069290	NW_004457654.1	401874	403806	D	ACA1_069290	join(<401874..401882,401979..402114,402186..402385,402468..402569,402637..402707,402826..402951,403050..403260,403371..403556,403648..>403806)	Acanthamoeba castellanii str. Neff	14924318
ACA1_069300	mRNA	ACA1_069300	NW_004457654.1	404475	405266	R	ACA1_069300	complement(join(<404475..405113,405192..>405266))	Acanthamoeba castellanii str. Neff	14924319
ACA1_069310	mRNA	ACA1_069310	NW_004457654.1	405412	407947	R	ACA1_069310	complement(join(<405412..405846,405920..406066,406163..406297,406433..406730,406820..406980,407059..407201,407291..407441,407506..407634,407774..>407947))	Acanthamoeba castellanii str. Neff	14924320
ACA1_069320	mRNA	ACA1_069320	NW_004457654.1	408593	410125	D	ACA1_069320	join(<408593..408598,408808..409200,409346..409362,409455..409632,409713..409849,410008..>410125)	Acanthamoeba castellanii str. Neff	14924321
ACA1_069330	mRNA	ACA1_069330	NW_004457654.1	410477	411059	R	ACA1_069330	complement(join(<410477..410590,410664..410876,410994..>411059))	Acanthamoeba castellanii str. Neff	14924322
ACA1_069340	mRNA	ACA1_069340	NW_004457654.1	413125	416390	R	ACA1_069340	complement(join(<413125..413133,413320..413397,413467..413563,413631..413691,413777..413864,413943..413987,414032..414111,414191..414272,414369..414479,414547..414617,414699..414774,414863..414946,415058..415120,415201..415406,415485..415584,415660..415739,415821..415935,416016..416061,416248..>416390))	Acanthamoeba castellanii str. Neff	14924323
ACA1_069350	mRNA	ACA1_069350	NW_004457654.1	416775	420059	R	ACA1_069350	complement(join(<416775..417014,417074..417182,417334..417418,417508..417604,417678..417750,417846..417945,418063..418132,418227..418322,418397..418624,418763..418911,419036..419130,419272..419369,419451..419538,419613..419723,419808..419907,419966..>420059))	Acanthamoeba castellanii str. Neff	14924324
ACA1_069360	mRNA	ACA1_069360	NW_004457654.1	420309	421006	D	ACA1_069360	join(<420309..420336,420457..420527,420608..>421006)	Acanthamoeba castellanii str. Neff	14924325
ACA1_069370	mRNA	ACA1_069370	NW_004457654.1	421197	421952	D	ACA1_069370	join(<421197..421271,421345..421392,421527..421643,421714..421911,421947..>421952)	Acanthamoeba castellanii str. Neff	14924326
ACA1_069380	mRNA	ACA1_069380	NW_004457654.1	422804	427070	D	ACA1_069380	join(<422804..422950,423072..423155,423218..423283,423407..423568,423651..423753,423837..423907,424012..424176,424255..424419,424539..425300,425413..425519,425636..425840,425952..426020,426096..426297,426393..426529,426605..426825,426899..>427070)	Acanthamoeba castellanii str. Neff	14924327
ACA1_069390	mRNA	ACA1_069390	NW_004457654.1	427153	428190	R	ACA1_069390	complement(join(<427153..427357,427443..427533,427618..427734,427816..427910,427976..>428190))	Acanthamoeba castellanii str. Neff	14924328
ACA1_069400	mRNA	ACA1_069400	NW_004457654.1	428406	430076	D	ACA1_069400	join(<428406..428603,428729..428800,428875..428926,428969..429052,429138..429428,429466..429544,429627..429776,429866..>430076)	Acanthamoeba castellanii str. Neff	14924329
ACA1_069410	mRNA	ACA1_069410	NW_004457654.1	430787	431907	D	ACA1_069410	join(<430787..430824,430878..431052,431150..431217,431291..431391,431460..431541,431613..431688,431857..>431907)	Acanthamoeba castellanii str. Neff	14924330
ACA1_069420	mRNA	ACA1_069420	NW_004457654.1	431979	434622	R	ACA1_069420	complement(join(<431979..432837,432907..433451,433537..433731,433817..434059,434143..>434622))	Acanthamoeba castellanii str. Neff	14924331
ACA1_069430	mRNA	ACA1_069430	NW_004457654.1	436213	439367	D	ACA1_069430	join(<436213..436306,436389..436504,436614..436793,436885..437184,437256..437468,437541..437693,437773..437919,437986..438279,438379..438579,438695..438940,439030..439182,439272..>439367)	Acanthamoeba castellanii str. Neff	14924332
ACA1_069440	mRNA	ACA1_069440	NW_004457654.1	439718	443855	D	ACA1_069440	join(<439718..439846,440010..440160,440292..440369,440487..440641,440734..440853,440968..441137,441237..441339,441420..441623,441705..442175,442235..442309,442540..442815,442914..443156,443245..443534,443633..>443855)	Acanthamoeba castellanii str. Neff	14924333
ACA1_069450	mRNA	ACA1_069450	NW_004457654.1	444709	447262	D	ACA1_069450	join(<444709..444744,444789..444832,445026..445120,445256..445435,445503..445649,445745..445846,445947..446059,446288..446425,446515..446625,446776..446937,447047..>447262)	Acanthamoeba castellanii str. Neff	14924334
ACA1_069460	mRNA	ACA1_069460	NW_004457654.1	447548	448325	D	ACA1_069460	join(<447548..447666,447743..>448325)	Acanthamoeba castellanii str. Neff	14924335
ACA1_069470	mRNA	ACA1_069470	NW_004457654.1	449008	449969	R	ACA1_069470	complement(join(<449008..449412,449428..449803,449890..>449969))	Acanthamoeba castellanii str. Neff	14924336
ACA1_069480	mRNA	ACA1_069480	NW_004457654.1	450017	452929	R	ACA1_069480	complement(join(<450017..450210,450304..450442,450519..450698,450766..450852,450945..451029,451135..451206,451273..451325,451405..451461,451543..451679,451776..451842,451946..452045,452135..452191,452296..452405,452487..452554,452646..452669,452815..>452929))	Acanthamoeba castellanii str. Neff	14924337
ACA1_069490	mRNA	ACA1_069490	NW_004457654.1	453253	455220	D	ACA1_069490	join(<453253..453337,453436..453492,453514..453721,453811..453918,454057..454414,454488..454728,454844..454962,455026..>455220)	Acanthamoeba castellanii str. Neff	14924338
ACA1_069500	mRNA	ACA1_069500	NW_004457654.1	455256	457562	R	ACA1_069500	complement(join(<455256..455425,455503..455578,455704..455831,455922..455982,456106..456177,456254..456381,456468..456606,456724..456830,456934..457063,457152..>457562))	Acanthamoeba castellanii str. Neff	14924339
ACA1_069510	mRNA	ACA1_069510	NW_004457654.1	458177	460533	R	ACA1_069510	complement(join(<458177..458301,458358..458465,458635..458761,458859..458991,459063..459159,459309..459514,459630..459844,459917..460025,460313..>460533))	Acanthamoeba castellanii str. Neff	14924340
ACA1_069520	mRNA	ACA1_069520	NW_004457654.1	461108	462507	R	ACA1_069520	complement(join(<461108..461405,461764..461873,461946..462050,462121..462234,462310..>462507))	Acanthamoeba castellanii str. Neff	14924341
ACA1_069540	mRNA	ACA1_069540	NW_004457654.1	467340	468405	R	ACA1_069540	complement(join(<467340..467657,467745..468157,468234..>468405))	Acanthamoeba castellanii str. Neff	14924343
ACA1_069550	mRNA	ACA1_069550	NW_004457654.1	468903	469496	R	ACA1_069550	complement(<468903..>469496)	Acanthamoeba castellanii str. Neff	14924344
ACA1_069560	mRNA	ACA1_069560	NW_004457654.1	469732	470270	D	ACA1_069560	join(<469732..469839,469871..469975,470016..470120,470232..>470270)	Acanthamoeba castellanii str. Neff	14924345
ACA1_069570	mRNA	ACA1_069570	NW_004457654.1	471007	473917	D	ACA1_069570	join(<471007..471015,471101..471160,471473..471611,471688..471828,471913..472092,472167..472313,472402..472503,472591..472703,472797..472944,473026..473087,473236..473367,473453..473547,473606..473672,473745..473840,473870..>473917)	Acanthamoeba castellanii str. Neff	14924346
ACA1_069580	mRNA	ACA1_069580	NW_004457654.1	475012	479065	R	ACA1_069580	complement(join(<475012..475238,475349..475626,475732..475810,475880..476038,476155..476262,476333..476632,476696..476758,476850..476876,477002..477130,477221..477250,477354..477476,477557..477583,477669..477797,477867..478016,478198..478269,478410..478433,478600..478701,478957..>479065))	Acanthamoeba castellanii str. Neff	14924347
ACA1_069590	mRNA	ACA1_069590	NW_004457654.1	479205	481738	R	ACA1_069590	complement(join(<479205..479373,479459..479535,479639..479722,479851..479906,480001..480106,480171..480221,480293..480429,480536..480669,480776..480915,480977..481141,481234..481371,481430..>481738))	Acanthamoeba castellanii str. Neff	14924348
ACA1_069600	mRNA	ACA1_069600	NW_004457654.1	481918	482547	D	ACA1_069600	join(<481918..482325,482341..>482547)	Acanthamoeba castellanii str. Neff	14924349
ACA1_069610	mRNA	ACA1_069610	NW_004457654.1	482707	483360	R	ACA1_069610	complement(<482707..>483360)	Acanthamoeba castellanii str. Neff	14924350
ACA1_069620	mRNA	ACA1_069620	NW_004457654.1	483666	494713	D	ACA1_069620	join(<483666..483794,483879..484056,484179..484301,484382..485172,485252..485374,485446..485605,485706..485774,485840..485925,486037..486125,486208..486566,486626..486696,486764..486877,487006..487134,487201..487338,487431..487539,487646..487755,487802..487994,488054..488118,488318..488677,488790..489135,489283..489635,489701..489777,489846..490382,490494..490902,491001..493236,493332..493426,493776..493937,494025..494230,494338..494509,494621..>494713)	Acanthamoeba castellanii str. Neff	14924351
ACA1_069630	mRNA	ACA1_069630	NW_004457654.1	495427	497207	D	ACA1_069630	join(<495427..495534,495588..495689,495799..496042,496110..496474,496501..496921,497005..>497207)	Acanthamoeba castellanii str. Neff	14924352
ACA1_069640	mRNA	ACA1_069640	NW_004457654.1	497223	499064	R	ACA1_069640	complement(join(<497223..497491,497593..497644,497718..497903,497995..498054,498235..498390,498518..498628,498735..498896,498984..>499064))	Acanthamoeba castellanii str. Neff	14924353
ACA1_069650	mRNA	ACA1_069650	NW_004457654.1	499404	502200	R	ACA1_069650	complement(join(<499404..499562,499672..500061,500154..500351,500442..500622,500722..500864,500921..501047,501122..501271,501381..501597,501724..501954,502074..>502200))	Acanthamoeba castellanii str. Neff	14924354
ACA1_069660	mRNA	ACA1_069660	NW_004457654.1	502866	504666	D	ACA1_069660	join(<502866..503059,503201..503540,503628..503837,503936..504129,504195..504340,504420..504513,504603..>504666)	Acanthamoeba castellanii str. Neff	14924355
ACA1_069670	mRNA	ACA1_069670	NW_004457654.1	505593	506267	D	ACA1_069670	join(<505593..505662,505912..>506267)	Acanthamoeba castellanii str. Neff	14924356
ACA1_069680	mRNA	ACA1_069680	NW_004457654.1	506531	507613	R	ACA1_069680	complement(<506531..>507613)	Acanthamoeba castellanii str. Neff	14924357
ACA1_069690	mRNA	ACA1_069690	NW_004457654.1	509175	524679	D	ACA1_069690	join(<509175..509235,509391..509518,509744..509925,510012..510143,510232..510779,510855..511174,511253..512017,512092..512305,512384..512710,512788..513024,513108..513250,513372..514287,514366..514430,514443..514681,514787..516178,516260..516437,516561..516845,516925..517185,517288..519023,519094..519237,519403..519592,519681..520015,520089..520389,520483..520587,520695..521092,521174..521327,521404..521802,521885..522286,522372..522547,522618..522918,522987..523973,524104..>524679)	Acanthamoeba castellanii str. Neff	14924358
ACA1_069700	mRNA	ACA1_069700	NW_004457654.1	524784	527858	D	ACA1_069700	join(<524784..525056,525256..525440,525575..525687,525991..526169,526242..526353,526431..526620,526713..526797,526868..526955,527042..527073,527166..527236,527315..527393,527480..527587,527667..>527858)	Acanthamoeba castellanii str. Neff	14924359
ACA1_069710	mRNA	ACA1_069710	NW_004457654.1	528390	534952	D	ACA1_069710	join(<528390..528464,528480..528623,528718..528852,528983..529291,529373..529686,529788..530116,530216..530451,530521..530664,530739..530892,530977..531124,531235..531434,531517..531776,531842..531958,532037..532133,532200..532464,532569..533252,533343..533620,533696..534154,534227..534432,534548..>534952)	Acanthamoeba castellanii str. Neff	14924360
ACA1_069720	mRNA	ACA1_069720	NW_004457654.1	535417	538455	D	ACA1_069720	join(<535417..535487,535540..535613,535729..535850,536227..536305,536423..536568,536639..536724,536827..536891,536989..537232,537339..>538455)	Acanthamoeba castellanii str. Neff	14924361
ACA1_069730	mRNA	ACA1_069730	NW_004457654.1	538568	539716	D	ACA1_069730	join(<538568..538676,538806..538907,538985..539046,539113..539219,539312..539440,539512..>539716)	Acanthamoeba castellanii str. Neff	14924362
ACA1_069740	mRNA	ACA1_069740	NW_004457654.1	539841	542505	R	ACA1_069740	complement(join(<539841..540079,540152..540460,540555..540696,540780..540917,540998..541134,541293..541422,541490..541601,541673..541755,541836..541953,542025..542188,542266..>542505))	Acanthamoeba castellanii str. Neff	14924363
ACA1_069750	mRNA	ACA1_069750	NW_004457654.1	542841	545152	R	ACA1_069750	complement(join(<542841..543137,543260..543456,543583..543674,543767..543833,543906..544004,544075..544177,544342..544679,544786..544885,544991..>545152))	Acanthamoeba castellanii str. Neff	14924364
ACA1_069760	mRNA	ACA1_069760	NW_004457654.1	545283	551351	R	ACA1_069760	complement(join(<545283..545496,545588..545817,545953..546220,546324..546468,546556..546648,546736..546900,547033..547367,547464..547566,547640..547834,547915..548014,548125..548260,548332..548415,548506..548932,549004..549337,549414..549528,549608..549725,549819..549908,549987..550182,550412..550641,550722..550972,551065..>551351))	Acanthamoeba castellanii str. Neff	14924365
ACA1_069770	mRNA	ACA1_069770	NW_004457654.1	551610	553932	D	ACA1_069770	join(<551610..551856,551934..552181,552268..552522,552619..552945,553026..553152,553261..553510,553599..553740,553828..>553932)	Acanthamoeba castellanii str. Neff	14924366
ACA1_069780	mRNA	ACA1_069780	NW_004457654.1	554117	556110	D	ACA1_069780	join(<554117..554214,554434..554739,554817..554897,554976..555052,555155..555553,555640..555777,555893..>556110)	Acanthamoeba castellanii str. Neff	14924367
ACA1_069790	mRNA	ACA1_069790	NW_004457654.1	558144	558518	D	ACA1_069790	<558144..>558518	Acanthamoeba castellanii str. Neff	14924368
ACA1_069800	mRNA	ACA1_069800	NW_004457654.1	559960	561562	D	ACA1_069800	join(<559960..560253,560434..560651,560748..560850,560992..561073,561088..561272,561386..>561562)	Acanthamoeba castellanii str. Neff	14924369
ACA1_069810	mRNA	ACA1_069810	NW_004457654.1	562003	567369	D	ACA1_069810	join(<562003..562410,562453..562719,562933..563020,563104..563211,563360..563446,563528..563602,563697..563817,563937..564006,564107..564560,564679..564902,565021..565098,565180..565330,565402..565477,565561..565820,565908..566035,566128..566202,566310..566396,566507..566567,566895..566977,567068..567179,567281..>567369)	Acanthamoeba castellanii str. Neff	14924370
ACA1_069820	mRNA	ACA1_069820	NW_004457654.1	567522	568109	R	ACA1_069820	complement(<567522..>568109)	Acanthamoeba castellanii str. Neff	14924371
ACA1_069830	mRNA	ACA1_069830	NW_004457654.1	568539	570915	R	ACA1_069830	complement(join(<568539..568768,568845..568968,569043..569410,569502..>570915))	Acanthamoeba castellanii str. Neff	14924372
ACA1_069840	mRNA	ACA1_069840	NW_004457654.1	572044	573299	D	ACA1_069840	join(<572044..572132,572299..572441,572553..572680,572796..572912,573006..>573299)	Acanthamoeba castellanii str. Neff	14924373
ACA1_069850	mRNA	ACA1_069850	NW_004457654.1	573589	575204	D	ACA1_069850	join(<573589..573607,573811..573926,574114..574240,574341..574429,574546..574764,574856..574990,575076..>575204)	Acanthamoeba castellanii str. Neff	14924374
ACA1_069860	mRNA	ACA1_069860	NW_004457654.1	575408	578712	R	ACA1_069860	complement(join(<575408..575627,575779..575929,576023..576266,576370..576518,576610..576724,576911..577072,577169..577812,577916..578239,578340..>578712))	Acanthamoeba castellanii str. Neff	14924375
ACA1_069870	mRNA	ACA1_069870	NW_004457654.1	579236	584427	R	ACA1_069870	complement(join(<579236..579323,579384..579443,579528..579742,579858..580025,580369..580559,580651..580783,580849..580919,580995..581154,581248..581298,581468..581511,581551..581688,581820..581943,582047..582128,582199..582311,582373..582537,582680..582799,582888..582946,583088..583161,583263..583396,583472..583591,583768..583980,584248..584285,584382..>584427))	Acanthamoeba castellanii str. Neff	14924376
ACA1_069880	mRNA	ACA1_069880	NW_004457654.1	584723	586070	R	ACA1_069880	complement(join(<584723..584928,585028..585540,585611..585721,585827..585889,585971..>586070))	Acanthamoeba castellanii str. Neff	14924377
ACA1_069890	mRNA	ACA1_069890	NW_004457654.1	586435	594674	R	ACA1_069890	complement(join(<586435..586677,586788..586900,587022..587101,587217..587294,587503..587678,587762..587914,588015..588220,588315..588413,588555..588659,588764..588862,588970..589065,589146..589277,589397..589555,589700..589765,589840..589908,590021..590080,590144..590212,590339..590457,590595..590681,590785..590875,590950..591054,591197..591265,591366..591464,591567..591665,591744..591882,592014..592162,592259..592499,592576..592754,592900..592977,593066..593150,593264..593360,593494..593579,593651..593949,594039..594143,594209..594266,594375..594494,594570..>594674))	Acanthamoeba castellanii str. Neff	14924378
ACA1_069900	mRNA	ACA1_069900	NW_004457654.1	595250	596489	D	ACA1_069900	join(<595250..595451,595563..595736,595815..595958,596092..>596489)	Acanthamoeba castellanii str. Neff	14924379
ACA1_069910	mRNA	ACA1_069910	NW_004457654.1	596706	598336	D	ACA1_069910	join(<596706..596790,597000..597202,597323..597491,597603..597700,597783..597875,597982..598191,598259..>598336)	Acanthamoeba castellanii str. Neff	14924380
ACA1_069920	mRNA	ACA1_069920	NW_004457654.1	598463	605211	R	ACA1_069920	complement(join(<598463..598545,598635..598741,598836..598927,599056..599153,599307..599401,599501..599668,599819..599959,600113..600228,600376..600483,600547..600765,600854..601138,601223..601471,601561..601659,601764..601847,601939..602073,602311..602403,602596..602760,602857..603181,603316..603398,603473..603582,603657..603736,603859..603977,604069..604173,604315..604413,604578..604618,604706..604907,605035..>605211))	Acanthamoeba castellanii str. Neff	14924381
ACA1_069930	mRNA	ACA1_069930	NW_004457654.1	605499	607654	R	ACA1_069930	complement(join(<605499..606029,606123..606281,606366..606811,606965..607067,607625..>607654))	Acanthamoeba castellanii str. Neff	14924382
ACA1_069940	mRNA	ACA1_069940	NW_004457654.1	607684	609160	D	ACA1_069940	join(<607684..607739,608019..608086,608182..608295,608456..608497,608617..608690,608824..608895,609032..>609160)	Acanthamoeba castellanii str. Neff	14924383
ACA1_069950	mRNA	ACA1_069950	NW_004457654.1	609313	609836	R	ACA1_069950	complement(join(<609313..609402,609529..609635,609731..>609836))	Acanthamoeba castellanii str. Neff	14924384
ACA1_069960	mRNA	ACA1_069960	NW_004457654.1	610120	611532	R	ACA1_069960	complement(join(<610120..610241,610343..610500,610610..610685,610789..611058,611152..611302,611375..611471,611486..>611532))	Acanthamoeba castellanii str. Neff	14924385
ACA1_069970	mRNA	ACA1_069970	NW_004457654.1	611783	612388	D	ACA1_069970	<611783..>612388	Acanthamoeba castellanii str. Neff	14924386
ACA1_069980	mRNA	ACA1_069980	NW_004457654.1	613783	615101	D	ACA1_069980	join(<613783..614199,614284..614442,614538..>615101)	Acanthamoeba castellanii str. Neff	14924387
ACA1_070000	mRNA	ACA1_070000	NW_004457654.1	617141	618021	D	ACA1_070000	join(<617141..617196,617294..617418,617516..617703,617848..>618021)	Acanthamoeba castellanii str. Neff	14924389
ACA1_070010	mRNA	ACA1_070010	NW_004457654.1	618122	623829	R	ACA1_070010	complement(join(<618122..618276,618379..618488,618579..618714,618794..618934,619149..619264,619396..619511,619620..619742,619876..619971,620100..620186,620340..620426,620553..620681,620782..620970,621228..621293,621510..621635,621761..622054,622176..622319,622402..622470,622582..622697,622814..623063,623118..623523,623738..>623829))	Acanthamoeba castellanii str. Neff	14924390
ACA1_070020	mRNA	ACA1_070020	NW_004457654.1	624052	625591	D	ACA1_070020	join(<624052..624154,624335..624727,624903..625064,625170..625296,625363..>625591)	Acanthamoeba castellanii str. Neff	14924391
ACA1_070030	mRNA	ACA1_070030	NW_004457654.1	625698	627282	R	ACA1_070030	complement(join(<625698..625841,625916..626013,626183..626287,626408..626825,627022..>627282))	Acanthamoeba castellanii str. Neff	14924392
ACA1_070040	mRNA	ACA1_070040	NW_004457654.1	627485	629780	D	ACA1_070040	join(<627485..627532,627621..627759,627862..627944,628015..628269,628342..628705,628807..>629780)	Acanthamoeba castellanii str. Neff	14924393
ACA1_070050	mRNA	ACA1_070050	NW_004457654.1	630223	630675	R	ACA1_070050	complement(<630223..>630675)	Acanthamoeba castellanii str. Neff	14924394
ACA1_070160	mRNA	ACA1_070160	NW_004457654.1	630995	633673	D	ACA1_070160	join(<630995..631427,631623..632578,632672..>633673)	Acanthamoeba castellanii str. Neff	14924395
ACA1_070170	mRNA	ACA1_070170	NW_004457654.1	634523	635226	D	ACA1_070170	join(<634523..634541,634660..634734,634777..634947,635090..>635226)	Acanthamoeba castellanii str. Neff	14924396
ACA1_070180	mRNA	ACA1_070180	NW_004457654.1	635305	635731	D	ACA1_070180	join(<635305..635482,635568..>635731)	Acanthamoeba castellanii str. Neff	14924397
ACA1_070190	mRNA	ACA1_070190	NW_004457654.1	635961	636326	R	ACA1_070190	complement(<635961..>636326)	Acanthamoeba castellanii str. Neff	14924398
ACA1_070200	mRNA	ACA1_070200	NW_004457654.1	636392	639276	R	ACA1_070200	complement(join(<636392..637249,637588..>639276))	Acanthamoeba castellanii str. Neff	14924399
ACA1_070310	mRNA	ACA1_070310	NW_004457654.1	640128	640361	D	ACA1_070310	<640128..>640361	Acanthamoeba castellanii str. Neff	14924400
ACA1_070330	mRNA	ACA1_070330	NW_004457654.1	641756	644706	D	ACA1_070330	join(<641756..641891,641985..642071,642151..642225,642320..642394,642513..642581,642948..643007,643102..643182,643261..643347,643424..643621,643703..643831,643935..644013,644095..644357,644486..>644706)	Acanthamoeba castellanii str. Neff	14924402
ACA1_070350	mRNA	ACA1_070350	NW_004457654.1	648982	650471	R	ACA1_070350	complement(join(<648982..649556,649680..649823,649979..650208,650311..>650471))	Acanthamoeba castellanii str. Neff	14924404
ACA1_070360	mRNA	ACA1_070360	NW_004457654.1	650751	651977	R	ACA1_070360	complement(<650751..>651977)	Acanthamoeba castellanii str. Neff	14924405
ACA1_070370	mRNA	ACA1_070370	NW_004457654.1	652300	655114	D	ACA1_070370	join(<652300..652367,652510..653446,653545..653673,653746..653923,654006..654320,654402..654589,654725..654949,655037..>655114)	Acanthamoeba castellanii str. Neff	14924406
ACA1_070380	mRNA	ACA1_070380	NW_004457654.1	655649	662077	D	ACA1_070380	join(<655649..655750,655852..656211,656313..656580,656748..656821,657030..657293,657427..657621,657689..657822,657882..658516,658610..659082,659152..659339,659418..659592,659683..660297,660383..660541,660607..660691,660754..660803,660981..661165,661235..661418,661557..661811,661907..>662077)	Acanthamoeba castellanii str. Neff	14924407
ACA1_070390	mRNA	ACA1_070390	NW_004457654.1	663122	665128	D	ACA1_070390	join(<663122..663163,663404..663532,663647..663703,663834..664003,664093..664367,664545..664674,664753..664939,665015..>665128)	Acanthamoeba castellanii str. Neff	14924408
ACA1_070400	mRNA	ACA1_070400	NW_004457654.1	665349	667065	R	ACA1_070400	complement(join(<665349..666519,666635..666761,666867..>667065))	Acanthamoeba castellanii str. Neff	14924409
ACA1_070410	mRNA	ACA1_070410	NW_004457654.1	667791	669858	R	ACA1_070410	complement(join(<667791..667994,668107..668158,668231..668373,668459..668541,668629..668728,668829..669033,669113..669228,669364..669414,669499..669575,669738..>669858))	Acanthamoeba castellanii str. Neff	14924410
ACA1_070420	mRNA	ACA1_070420	NW_004457654.1	670250	671950	D	ACA1_070420	join(<670250..670448,670584..671134,671237..671728,671816..>671950)	Acanthamoeba castellanii str. Neff	14924411
ACA1_070430	mRNA	ACA1_070430	NW_004457654.1	672157	673341	D	ACA1_070430	<672157..>673341	Acanthamoeba castellanii str. Neff	14924412
ACA1_070440	mRNA	ACA1_070440	NW_004457654.1	673652	686369	R	ACA1_070440	complement(join(<673652..673849,673954..674168,674272..674356,674465..674555,674755..674875,674980..675043,675170..675448,675552..675817,675927..675973,676151..676442,676554..676601,676671..676810,676929..677446,677529..677761,677868..678395,678474..678866,678949..679039,679052..679117,679267..679365,679463..679581,679671..679940,680059..680222,680349..680601,680681..680894,680958..680998,681085..681346,681507..681770,681874..681947,682063..682215,682297..682500,682632..682777,682904..683258,683342..683471,683563..683678,683748..683959,684062..684279,684388..684473,684561..684670,684775..684931,685076..685225,685328..685444,685646..685744,685820..685915,686032..686076,686264..>686369))	Acanthamoeba castellanii str. Neff	14924413
ACA1_070450	mRNA	ACA1_070450	NW_004457654.1	686620	687324	D	ACA1_070450	join(<686620..686710,686846..>687324)	Acanthamoeba castellanii str. Neff	14924414
ACA1_070460	mRNA	ACA1_070460	NW_004457654.1	687592	689754	R	ACA1_070460	complement(join(<687592..687656,687717..687875,687945..688128,688256..688366,688475..688770,688850..689414,689542..>689754))	Acanthamoeba castellanii str. Neff	14924415
ACA1_070470	mRNA	ACA1_070470	NW_004457654.1	690307	692840	D	ACA1_070470	join(<690307..690612,690753..690824,690939..690992,691106..691184,691353..691455,691586..691833,691921..692094,692220..692611,692745..>692840)	Acanthamoeba castellanii str. Neff	14924416
ACA1_070480	mRNA	ACA1_070480	NW_004457654.1	692999	694982	R	ACA1_070480	complement(join(<692999..693127,693256..693347,693439..693547,693610..693653,693766..693802,693956..694436,694567..694595,694726..694874,694979..>694982))	Acanthamoeba castellanii str. Neff	14924417
ACA1_070490	mRNA	ACA1_070490	NW_004457654.1	695243	701631	D	ACA1_070490	join(<695243..695421,695532..695637,695740..695904,696046..696287,696366..696594,696727..696901,697001..697193,697280..697378,697461..697522,697605..697758,697853..698063,698148..698294,698392..698790,698883..699146,699209..699368,699482..699929,699977..700130,700251..700395,700522..700724,700829..701074,701179..701359,701480..>701631)	Acanthamoeba castellanii str. Neff	14924418
ACA1_070500	mRNA	ACA1_070500	NW_004457654.1	701934	703400	R	ACA1_070500	complement(join(<701934..702136,702218..702339,702503..702546,702681..702737,702889..702904,703026..703129,703222..703249,703339..>703400))	Acanthamoeba castellanii str. Neff	14924419
ACA1_070510	mRNA	ACA1_070510	NW_004457654.1	704818	705276	R	ACA1_070510	complement(join(<704818..705009,705181..>705276))	Acanthamoeba castellanii str. Neff	14924420
ACA1_070520	mRNA	ACA1_070520	NW_004457654.1	707011	707541	D	ACA1_070520	join(<707011..707130,707153..707486,707531..>707541)	Acanthamoeba castellanii str. Neff	14924421
ACA1_070530	mRNA	ACA1_070530	NW_004457654.1	712123	715883	D	ACA1_070530	join(<712123..712336,712529..712659,712760..712846,712967..713082,713239..714465,714561..714813,714949..715047,715166..715323,715479..715592,715736..>715883)	Acanthamoeba castellanii str. Neff	14924422
ACA1_070540	mRNA	ACA1_070540	NW_004457654.1	715980	720230	D	ACA1_070540	join(<715980..716084,716271..716400,716522..716629,716742..716797,716946..717047,717190..717279,717418..717594,717684..717753,717905..718011,718104..718207,718333..718418,718558..718679,718790..718904,719019..719561,719644..719726,719829..>720230)	Acanthamoeba castellanii str. Neff	14924423
ACA1_070550	mRNA	ACA1_070550	NW_004457654.1	720646	728434	R	ACA1_070550	complement(join(<720646..720747,720892..720984,721077..721260,721353..721422,721543..721647,721735..721855,721996..722072,722192..722264,722443..722577,722693..722956,723063..723398,723500..723577,723644..723724,723829..723945,724066..724203,724318..724451,724557..724679,724752..724886,724996..725093,725193..725266,725359..725433,725525..725658,725732..725889,726009..726100,726193..726361,726448..726530,726600..726710,726816..726932,727029..727113,727191..727270,727355..727467,727556..727669,727752..727822,727890..727940,727998..728043,728119..>728434))	Acanthamoeba castellanii str. Neff	14924424
ACA1_070560	mRNA	ACA1_070560	NW_004457654.1	728621	735680	D	ACA1_070560	join(<728621..730529,730635..730935,731061..731100,731246..731402,731697..731791,731902..732001,732150..732292,732481..732535,732689..732760,732870..733210,733339..733563,733749..733995,734112..734299,734419..734559,734632..734781,734876..735011,735113..735290,735377..735513,735610..>735680)	Acanthamoeba castellanii str. Neff	14924425
ACA1_070570	mRNA	ACA1_070570	NW_004457654.1	736012	737038	R	ACA1_070570	complement(join(<736012..736040,736148..736229,736329..736457,736560..736729,736796..736915,736996..>737038))	Acanthamoeba castellanii str. Neff	14924426
ACA1_070580	mRNA	ACA1_070580	NW_004457654.1	737335	739052	D	ACA1_070580	join(<737335..737367,737482..737530,737660..737812,738098..738402,738567..738697,738796..738924,738989..>739052)	Acanthamoeba castellanii str. Neff	14924427
ACA1_070590	mRNA	ACA1_070590	NW_004457654.1	739340	740914	R	ACA1_070590	complement(join(<739340..739403,739480..739727,739957..740302,740468..740509,740640..>740914))	Acanthamoeba castellanii str. Neff	14924428
ACA1_070610	mRNA	ACA1_070610	NW_004457654.1	747503	748704	D	ACA1_070610	join(<747503..747751,747868..748018,748121..748308,748506..748610,748639..>748704)	Acanthamoeba castellanii str. Neff	14924430
ACA1_070620	mRNA	ACA1_070620	NW_004457654.1	748748	750567	D	ACA1_070620	join(<748748..749045,749134..749215,749355..749379,749469..749518,749629..749729,749798..749847,749974..750315,750436..>750567)	Acanthamoeba castellanii str. Neff	14924431
ACA1_070630	mRNA	ACA1_070630	NW_004457654.1	750754	751471	R	ACA1_070630	complement(join(<750754..751196,751282..>751471))	Acanthamoeba castellanii str. Neff	14924432
ACA1_070640	mRNA	ACA1_070640	NW_004457654.1	751765	753610	D	ACA1_070640	join(<751765..752168,752234..752366,752442..752528,752691..752746,752890..753036,753232..753306,753466..>753610)	Acanthamoeba castellanii str. Neff	14924433
ACA1_070650	mRNA	ACA1_070650	NW_004457654.1	754168	756642	D	ACA1_070650	join(<754168..755841,755965..756089,756158..756286,756503..756596,756616..>756642)	Acanthamoeba castellanii str. Neff	14924434
ACA1_070660	mRNA	ACA1_070660	NW_004457654.1	756791	757567	D	ACA1_070660	join(<756791..756957,757027..757174,757388..>757567)	Acanthamoeba castellanii str. Neff	14924435
ACA1_070770	mRNA	ACA1_070770	NW_004457654.1	758281	758640	R	ACA1_070770	complement(<758281..>758640)	Acanthamoeba castellanii str. Neff	14924436
ACA1_070780	mRNA	ACA1_070780	NW_004457654.1	758594	759811	D	ACA1_070780	join(<758594..758677,758750..758953,759113..759286,759401..759547,759632..>759811)	Acanthamoeba castellanii str. Neff	14924438
ACA1_070790	mRNA	ACA1_070790	NW_004457654.1	759999	762098	R	ACA1_070790	complement(join(<759999..760103,760291..760592,760748..>762098))	Acanthamoeba castellanii str. Neff	14924437
ACA1_070800	mRNA	ACA1_070800	NW_004457654.1	762239	764014	D	ACA1_070800	join(<762239..762448,762568..762930,763047..763149,763276..763357,763586..763705,763840..>764014)	Acanthamoeba castellanii str. Neff	14924439
ACA1_070810	mRNA	ACA1_070810	NW_004457654.1	764315	768514	D	ACA1_070810	join(<764315..764512,764567..764973,765596..766880,767009..767356,767527..767745,767907..768006,768133..768315,768399..>768514)	Acanthamoeba castellanii str. Neff	14924440
ACA1_070820	mRNA	ACA1_070820	NW_004457654.1	768734	770546	D	ACA1_070820	join(<768734..768738,768811..768921,769022..769068,769178..769327,769473..769554,769637..769723,769889..>770546)	Acanthamoeba castellanii str. Neff	14924441
ACA1_070830	mRNA	ACA1_070830	NW_004457654.1	770754	780348	R	ACA1_070830	complement(join(<770754..772763,772797..773522,773631..774446,774563..774694,774756..774806,775084..775338,775482..775691,775877..775981,776107..776191,776366..776547,776653..776823,776961..777095,777217..777396,777505..777618,777810..777977,778152..778253,778457..778642,778734..778922,779062..779223,779359..779560,779831..>780348))	Acanthamoeba castellanii str. Neff	14924442
ACA1_070860	mRNA	ACA1_070860	NW_004457654.1	790650	791497	D	ACA1_070860	join(<790650..790800,790950..791027,791157..>791497)	Acanthamoeba castellanii str. Neff	14924445
ACA1_070870	mRNA	ACA1_070870	NW_004457654.1	793959	794421	R	ACA1_070870	complement(join(<793959..794087,794153..794325,794391..>794421))	Acanthamoeba castellanii str. Neff	14924446
ACA1_070880	mRNA	ACA1_070880	NW_004457654.1	795369	795660	R	ACA1_070880	complement(join(<795369..795393,795464..>795660))	Acanthamoeba castellanii str. Neff	14924447
ACA1_070890	mRNA	ACA1_070890	NW_004457654.1	795962	796842	R	ACA1_070890	complement(join(<795962..796122,796238..796399,796460..796577,796804..>796842))	Acanthamoeba castellanii str. Neff	14924448
ACA1_070900	mRNA	ACA1_070900	NW_004457654.1	797086	798485	D	ACA1_070900	join(<797086..797146,797201..797251,797325..797496,797641..797775,797924..>798485)	Acanthamoeba castellanii str. Neff	14924449
ACA1_070910	mRNA	ACA1_070910	NW_004457654.1	798638	800361	R	ACA1_070910	complement(join(<798638..798795,799043..799130,799276..799350,799437..799580,799838..799920,800031..800088,800260..>800361))	Acanthamoeba castellanii str. Neff	14924450
ACA1_070920	mRNA	ACA1_070920	NW_004457654.1	800487	803552	D	ACA1_070920	join(<800487..800685,800724..800761,800852..800970,801062..801189,801390..801526,801673..801783,801869..801980,802108..802235,802452..802581,802744..802832,803000..803104,803361..>803552)	Acanthamoeba castellanii str. Neff	14924451
ACA1_070930	mRNA	ACA1_070930	NW_004457654.1	803745	804887	D	ACA1_070930	<803745..>804887	Acanthamoeba castellanii str. Neff	14924452
ACA1_070940	mRNA	ACA1_070940	NW_004457654.1	805227	808255	R	ACA1_070940	complement(join(<805227..805361,805465..805580,805766..805881,806024..806625,806807..807066,807214..>808255))	Acanthamoeba castellanii str. Neff	14924453
ACA1_070950	mRNA	ACA1_070950	NW_004457654.1	808432	811103	R	ACA1_070950	complement(join(<808432..808446,808550..808666,808758..808820,808958..809059,809186..809327,809477..809557,809697..809770,809977..810312,810473..810616,810753..>811103))	Acanthamoeba castellanii str. Neff	14924454
ACA1_070960	mRNA	ACA1_070960	NW_004457654.1	811401	816610	D	ACA1_070960	join(<811401..811880,811964..812020,812107..812199,812260..812382,812544..812681,812772..812901,813000..813130,813266..813382,813661..813768,813888..814118,814244..814359,814476..814609,814802..814907,814993..815079,815224..815344,815505..815937,816076..816184,816285..816397,816531..>816610)	Acanthamoeba castellanii str. Neff	14924455
ACA1_070970	mRNA	ACA1_070970	NW_004457654.1	816881	820778	R	ACA1_070970	complement(join(<816881..817060,817089..817343,817457..817525,817610..817708,817818..817917,818036..818248,818379..818439,818555..818661,818791..818922,819175..819266,819398..819464,819900..820037,820287..820374,820479..820593,820689..>820778))	Acanthamoeba castellanii str. Neff	14924456
ACA1_070980	mRNA	ACA1_070980	NW_004457654.1	820919	822270	R	ACA1_070980	complement(join(<820919..820939,821056..821233,821348..821417,821543..821585,821648..821732,821834..>822270))	Acanthamoeba castellanii str. Neff	14924457
ACA1_070990	mRNA	ACA1_070990	NW_004457654.1	822621	824016	D	ACA1_070990	join(<822621..822851,822954..823256,823365..823471,823666..823783,823924..>824016)	Acanthamoeba castellanii str. Neff	14924458
ACA1_071000	mRNA	ACA1_071000	NW_004457654.1	824177	827227	R	ACA1_071000	complement(join(<824177..824444,824536..824674,824820..824913,825037..825104,825210..825804,825915..825993,826111..826189,826300..>827227))	Acanthamoeba castellanii str. Neff	14924459
ACA1_071010	mRNA	ACA1_071010	NW_004457654.1	830887	834545	R	ACA1_071010	complement(join(<830887..831103,831219..831713,831773..832616,832698..832838,832928..833093,833200..833333,833415..833526,833651..833773,834103..834269,834326..>834545))	Acanthamoeba castellanii str. Neff	14924460
ACA1_071020	mRNA	ACA1_071020	NW_004457654.1	836145	836547	D	ACA1_071020	join(<836145..836153,836165..836492,836537..>836547)	Acanthamoeba castellanii str. Neff	14924461
ACA1_071030	mRNA	ACA1_071030	NW_004457654.1	838415	839702	R	ACA1_071030	complement(join(<838415..838712,838823..838911,839045..839221,839403..>839702))	Acanthamoeba castellanii str. Neff	14924462
ACA1_071040	mRNA	ACA1_071040	NW_004457654.1	841016	841565	D	ACA1_071040	join(<841016..841073,841127..841220,841291..841325,841408..>841565)	Acanthamoeba castellanii str. Neff	14924463
ACA1_071050	mRNA	ACA1_071050	NW_004457654.1	841777	853428	D	ACA1_071050	join(<841777..841809,841943..842091,842211..842393,842511..842740,843068..843594,843695..843835,843932..844049,844169..844263,844378..844475,844550..844652,844732..845397,845478..845550,845636..845784,845896..847626,847727..847866,847931..848022,848119..848275,848404..848516,848675..848797,848926..849031,849111..849204,849294..849500,849620..849775,849889..850237,850365..850485,850570..850670,850784..850910,851039..851332,851413..851481,851605..851960,852061..852236,852337..>853428)	Acanthamoeba castellanii str. Neff	14924464
ACA1_071060	mRNA	ACA1_071060	NW_004457654.1	854104	855302	D	ACA1_071060	join(<854104..854774,854882..855050,855153..>855302)	Acanthamoeba castellanii str. Neff	14924465
ACA1_071070	mRNA	ACA1_071070	NW_004457654.1	855615	855914	D	ACA1_071070	<855615..>855914	Acanthamoeba castellanii str. Neff	14924466
ACA1_071080	mRNA	ACA1_071080	NW_004457654.1	856049	857149	R	ACA1_071080	complement(join(<856049..856096,856201..856282,856364..856430,856519..856606,856677..856737,856821..>857149))	Acanthamoeba castellanii str. Neff	14924467
ACA1_071090	mRNA	ACA1_071090	NW_004457654.1	857767	859715	R	ACA1_071090	complement(join(<857767..858444,858475..858779,858854..859183,859277..859522,859589..>859715))	Acanthamoeba castellanii str. Neff	14924468
ACA1_071100	mRNA	ACA1_071100	NW_004457654.1	860090	861345	D	ACA1_071100	join(<860090..860139,860219..860298,860376..860433,860596..860689,860790..860927,861045..861138,861248..>861345)	Acanthamoeba castellanii str. Neff	14924469
ACA1_071110	mRNA	ACA1_071110	NW_004457654.1	861543	863907	R	ACA1_071110	complement(join(<861543..862178,862249..>863907))	Acanthamoeba castellanii str. Neff	14924470
ACA1_071120	mRNA	ACA1_071120	NW_004457654.1	865581	867087	D	ACA1_071120	join(<865581..865645,865760..866087,866211..866363,866517..866690,866830..>867087)	Acanthamoeba castellanii str. Neff	14924471
ACA1_071130	mRNA	ACA1_071130	NW_004457654.1	867169	868422	R	ACA1_071130	complement(join(<867169..867473,867585..867717,867866..867985,868067..868222,868303..>868422))	Acanthamoeba castellanii str. Neff	14924472
ACA1_071140	mRNA	ACA1_071140	NW_004457654.1	868930	869360	R	ACA1_071140	complement(join(<868930..869108,869234..>869360))	Acanthamoeba castellanii str. Neff	14924473
ACA1_071150	mRNA	ACA1_071150	NW_004457654.1	870645	875297	D	ACA1_071150	join(<870645..870878,871001..871574,871681..871838,872011..872119,872185..872561,872658..873031,873113..873285,873390..873482,873587..873702,874142..874211,874371..874429,874581..874723,874798..874930,875067..>875297)	Acanthamoeba castellanii str. Neff	14924474
ACA1_071160	mRNA	ACA1_071160	NW_004457654.1	875479	877373	D	ACA1_071160	join(<875479..875626,875737..875912,876020..876206,876344..876423,876563..876700,876841..877002,877104..>877373)	Acanthamoeba castellanii str. Neff	14924475
ACA1_071170	mRNA	ACA1_071170	NW_004457654.1	878808	883874	D	ACA1_071170	join(<878808..878925,879010..879108,879222..879314,879415..879527,879601..879775,879863..879942,880085..880211,880319..881354,881523..881893,881973..882058,882265..883430,883520..>883874)	Acanthamoeba castellanii str. Neff	14924476
ACA1_071180	mRNA	ACA1_071180	NW_004457654.1	884045	886175	R	ACA1_071180	complement(join(<884045..884283,884316..884600,884728..884784,884891..885454,885645..885787,885931..>886175))	Acanthamoeba castellanii str. Neff	14924477
ACA1_071190	mRNA	ACA1_071190	NW_004457654.1	886568	887538	D	ACA1_071190	join(<886568..886799,886898..>887538)	Acanthamoeba castellanii str. Neff	14924478
ACA1_071200	mRNA	ACA1_071200	NW_004457654.1	887761	889349	D	ACA1_071200	join(<887761..887802,887865..887955,888040..888130,888218..888487,888584..888779,888856..888945,889014..>889349)	Acanthamoeba castellanii str. Neff	14924479
ACA1_071210	mRNA	ACA1_071210	NW_004457654.1	889559	890388	R	ACA1_071210	complement(join(<889559..889848,889924..890152,890275..>890388))	Acanthamoeba castellanii str. Neff	14924480
ACA1_071220	mRNA	ACA1_071220	NW_004457654.1	891811	892607	R	ACA1_071220	complement(join(<891811..892145,892220..892328,892408..892455,892536..>892607))	Acanthamoeba castellanii str. Neff	14924481
ACA1_071230	mRNA	ACA1_071230	NW_004457654.1	892785	895002	D	ACA1_071230	join(<892785..892961,893110..893227,893363..893658,893780..893844,893974..894152,894250..894397,894477..>895002)	Acanthamoeba castellanii str. Neff	14924482
ACA1_071240	mRNA	ACA1_071240	NW_004457654.1	895067	898225	R	ACA1_071240	complement(join(<895067..895163,895270..895405,895484..895528,895630..895763,895895..895983,896130..896222,896392..896488,896661..896781,897051..897207,897428..897520,897650..897778,898157..>898225))	Acanthamoeba castellanii str. Neff	14924483
ACA1_071250	mRNA	ACA1_071250	NW_004457654.1	898420	905072	R	ACA1_071250	complement(join(<898420..898573,898648..>905072))	Acanthamoeba castellanii str. Neff	14924484
ACA1_071260	mRNA	ACA1_071260	NW_004457654.1	905565	906290	R	ACA1_071260	complement(join(<905565..905615,905774..906037,906114..>906290))	Acanthamoeba castellanii str. Neff	14924485
ACA1_071270	mRNA	ACA1_071270	NW_004457654.1	906855	911770	R	ACA1_071270	complement(join(<906855..906986,907066..907263,907360..907487,907569..907788,907867..908048,908150..908656,908748..909283,909782..909946,910135..910288,910358..910436,910513..910830,910918..910977,911092..911535,911615..>911770))	Acanthamoeba castellanii str. Neff	14924486
ACA1_071280	mRNA	ACA1_071280	NW_004457654.1	912135	914537	R	ACA1_071280	complement(join(<912135..912163,912230..912371,912452..912659,912758..912867,912950..913186,913275..913412,913595..913669,913751..913823,913926..914372,914467..>914537))	Acanthamoeba castellanii str. Neff	14924487
ACA1_071290	mRNA	ACA1_071290	NW_004457654.1	914820	918220	D	ACA1_071290	join(<914820..914836,914911..914976,915044..915074,915287..915409,915492..916055,916177..916303,916371..916443,916514..916640,916723..917044,917123..917386,917472..917694,917764..917937,918022..>918220)	Acanthamoeba castellanii str. Neff	14924488
ACA1_071300	mRNA	ACA1_071300	NW_004457654.1	918421	921015	R	ACA1_071300	complement(join(<918421..919391,919609..919749,919860..919975,920073..920107,920149..920786,920852..920968,921012..>921015))	Acanthamoeba castellanii str. Neff	14924489
ACA1_071320	mRNA	ACA1_071320	NW_004457654.1	926924	928057	D	ACA1_071320	<926924..>928057	Acanthamoeba castellanii str. Neff	14924491
ACA1_071330	mRNA	ACA1_071330	NW_004457654.1	928397	932689	D	ACA1_071330	join(<928397..928524,928591..928654,928750..928826,928905..928959,929054..929194,929287..929451,929596..929691,929800..929901,930090..930224,930396..930565,930748..930877,931293..931363,931453..931569,931640..931806,931935..932060,932151..932232,932320..932441,932523..>932689)	Acanthamoeba castellanii str. Neff	14924492
ACA1_071340	mRNA	ACA1_071340	NW_004457654.1	933007	933381	D	ACA1_071340	<933007..>933381	Acanthamoeba castellanii str. Neff	14924493
ACA1_071350	mRNA	ACA1_071350	NW_004457654.1	933506	934326	R	ACA1_071350	complement(join(<933506..933611,933707..933801,933912..934026,934100..>934326))	Acanthamoeba castellanii str. Neff	14924494
ACA1_071360	mRNA	ACA1_071360	NW_004457654.1	934613	942665	D	ACA1_071360	join(<934613..934665,934813..934934,935077..935141,935384..935562,935659..935735,935838..935959,936060..936197,936324..936465,936595..936654,936731..936768,936889..937017,937129..937225,937340..937479,937559..937670,937759..937838,937934..938004,938104..938225,938341..938514,938659..938759,938940..939535,939661..939769,939922..940044,940213..940293,940408..940508,940577..940650,940755..940888,941012..941116,941237..941332,941434..941783,941942..942033,942122..942191,942296..>942665)	Acanthamoeba castellanii str. Neff	14924495
ACA1_071370	mRNA	ACA1_071370	NW_004457654.1	942751	943456	R	ACA1_071370	complement(join(<942751..943257,943358..>943456))	Acanthamoeba castellanii str. Neff	14924496
ACA1_071380	mRNA	ACA1_071380	NW_004457654.1	943620	945262	D	ACA1_071380	join(<943620..943641,943716..944062,944190..945042,945156..>945262)	Acanthamoeba castellanii str. Neff	14924497
ACA1_071390	mRNA	ACA1_071390	NW_004457654.1	945600	947498	D	ACA1_071390	join(<945600..945645,945723..945896,945970..946175,946355..946404,946514..946569,946641..946700,946778..946806,946904..947012,947114..947155,947276..947314,947407..>947498)	Acanthamoeba castellanii str. Neff	14924498
ACA1_071400	mRNA	ACA1_071400	NW_004457654.1	947607	948630	D	ACA1_071400	join(<947607..947654,947781..947931,948014..948186,948256..948337,948422..>948630)	Acanthamoeba castellanii str. Neff	14924499
ACA1_071410	mRNA	ACA1_071410	NW_004457654.1	948726	949529	R	ACA1_071410	complement(<948726..>949529)	Acanthamoeba castellanii str. Neff	14924500
ACA1_071420	mRNA	ACA1_071420	NW_004457654.1	950085	951077	R	ACA1_071420	complement(join(<950085..950570,950655..950849,950940..>951077))	Acanthamoeba castellanii str. Neff	14924501
ACA1_071430	mRNA	ACA1_071430	NW_004457654.1	951499	952832	D	ACA1_071430	join(<951499..951915,952020..952109,952217..952277,952369..952450,952547..>952832)	Acanthamoeba castellanii str. Neff	14924502
ACA1_071440	mRNA	ACA1_071440	NW_004457654.1	952909	953729	R	ACA1_071440	complement(join(<952909..952959,953061..953260,953407..953480,953644..>953729))	Acanthamoeba castellanii str. Neff	14924503
ACA1_071450	mRNA	ACA1_071450	NW_004457654.1	955671	956468	D	ACA1_071450	<955671..>956468	Acanthamoeba castellanii str. Neff	14924504
ACA1_071460	mRNA	ACA1_071460	NW_004457654.1	956554	960693	R	ACA1_071460	complement(join(<956554..956771,956894..957488,957578..957793,957902..957996,958063..958133,958300..958373,958458..958558,958657..958795,958868..959203,959359..959502,959544..959858,959945..960135,960243..960411,960481..>960693))	Acanthamoeba castellanii str. Neff	14924505
ACA1_071470	mRNA	ACA1_071470	NW_004457654.1	960907	963831	D	ACA1_071470	join(<960907..960952,961076..961141,961230..961251,961372..961482,961614..961695,961819..961977,962088..962172,962285..962417,962536..962624,962694..962721,962828..962937,963056..963135,963299..963426,963547..963650,963725..>963831)	Acanthamoeba castellanii str. Neff	14924506
ACA1_071480	mRNA	ACA1_071480	NW_004457654.1	964558	967181	D	ACA1_071480	join(<964558..964689,964715..964921,964994..965139,965216..965292,965374..965694,965857..965931,966007..966129,966222..966435,966516..966632,966759..966801,966824..966951,967040..>967181)	Acanthamoeba castellanii str. Neff	14924507
ACA1_071490	mRNA	ACA1_071490	NW_004457654.1	967377	969395	R	ACA1_071490	complement(join(<967377..967655,967752..968142,968277..968434,968521..968661,968769..>969395))	Acanthamoeba castellanii str. Neff	14924508
ACA1_071500	mRNA	ACA1_071500	NW_004457654.1	970279	971248	R	ACA1_071500	complement(join(<970279..970310,970343..970472,970738..970940,971033..971075,971138..>971248))	Acanthamoeba castellanii str. Neff	14924509
ACA1_071510	mRNA	ACA1_071510	NW_004457654.1	972587	976552	D	ACA1_071510	join(<972587..972823,972955..973074,973142..973190,973305..973451,973525..973618,973732..973893,974030..974171,974243..974360,974508..974674,974930..975165,975396..975474,975572..975706,975823..975932,976015..976115,976190..976303,976422..>976552)	Acanthamoeba castellanii str. Neff	14924510
ACA1_071520	mRNA	ACA1_071520	NW_004457654.1	976901	977948	D	ACA1_071520	join(<976901..977088,977219..977304,977375..977450,977546..977631,977725..>977948)	Acanthamoeba castellanii str. Neff	14924511
ACA1_071530	mRNA	ACA1_071530	NW_004457654.1	978435	982444	D	ACA1_071530	join(<978435..978543,978733..978936,979065..979640,979765..979992,980269..980349,980460..980633,980724..980780,980866..980926,981016..>982444)	Acanthamoeba castellanii str. Neff	14924512
ACA1_071540	mRNA	ACA1_071540	NW_004457654.1	983325	988281	D	ACA1_071540	join(<983325..983408,983548..983620,983710..983868,984201..984377,984503..984728,984925..985135,985213..985341,985432..985627,985730..>988281)	Acanthamoeba castellanii str. Neff	14924513
ACA1_071550	mRNA	ACA1_071550	NW_004457654.1	989233	992867	R	ACA1_071550	complement(join(<989233..989322,989410..989497,989585..989683,989775..990007,990104..990240,990426..990543,990626..990739,990881..991035,991157..991228,991325..991496,991530..991598,991693..991770,991871..992000,992069..992184,992306..992381,992544..992656,992766..>992867))	Acanthamoeba castellanii str. Neff	14924514
ACA1_071560	mRNA	ACA1_071560	NW_004457654.1	993580	993986	D	ACA1_071560	join(<993580..993717,993774..>993986)	Acanthamoeba castellanii str. Neff	14924515
ACA1_071570	mRNA	ACA1_071570	NW_004457654.1	994023	996312	R	ACA1_071570	complement(join(<994023..994194,994282..994387,994454..994496,994756..994874,994945..995071,995175..995279,995383..995511,995624..995800,995885..995937,996128..996244,996306..>996312))	Acanthamoeba castellanii str. Neff	14924516
ACA1_071580	mRNA	ACA1_071580	NW_004457654.1	996734	998864	R	ACA1_071580	complement(join(<996734..996942,997036..997551,997631..997734,997800..997903,997995..998186,998270..998403,998483..998552,998624..998716,998814..>998864))	Acanthamoeba castellanii str. Neff	14924517
ACA1_071590	mRNA	ACA1_071590	NW_004457654.1	999240	999584	R	ACA1_071590	complement(join(<999240..999452,999507..>999584))	Acanthamoeba castellanii str. Neff	14924518
ACA1_071600	mRNA	ACA1_071600	NW_004457654.1	1000385	1002520	D	ACA1_071600	join(<1000385..1000389,1000516..1000592,1000669..1000758,1000869..1001005,1001074..1001172,1001362..1001619,1001704..1001778,1001855..1001979,1002066..1002259,1002348..>1002520)	Acanthamoeba castellanii str. Neff	14924519
ACA1_071610	mRNA	ACA1_071610	NW_004457654.1	1002650	1004248	D	ACA1_071610	join(<1002650..1002734,1002826..1002956,1003044..1003158,1003251..1003345,1003444..1003588,1003672..1003761,1003859..1004023,1004097..>1004248)	Acanthamoeba castellanii str. Neff	14924520
ACA1_071620	mRNA	ACA1_071620	NW_004457654.1	1004323	1004854	R	ACA1_071620	complement(join(<1004323..1004560,1004632..1004732,1004795..>1004854))	Acanthamoeba castellanii str. Neff	14924521
ACA1_071630	mRNA	ACA1_071630	NW_004457654.1	1005295	1008639	D	ACA1_071630	join(<1005295..1005698,1005795..1005900,1005971..1006127,1006213..1006362,1006453..1006566,1006650..1006790,1006856..1006929,1007009..1007181,1007285..1007291,1007304..1007677,1007745..1008024,1008119..1008257,1008318..1008363,1008438..>1008639)	Acanthamoeba castellanii str. Neff	14924522
ACA1_071640	mRNA	ACA1_071640	NW_004457654.1	1009123	1013356	D	ACA1_071640	join(<1009123..1009737,1009851..1010025,1010115..1010218,1010320..1010479,1010612..1010724,1010828..1010937,1011050..1011131,1011234..1011373,1011455..1011557,1011641..1011704,1011838..1011980,1012086..1012158,1012317..1012640,1012717..1012792,1012879..1013029,1013126..>1013356)	Acanthamoeba castellanii str. Neff	14924523
ACA1_071650	mRNA	ACA1_071650	NW_004457654.1	1013776	1016977	D	ACA1_071650	join(<1013776..1013877,1013955..1014022,1014123..1014238,1014324..1014363,1014486..1014568,1014649..1014738,1014842..1014957,1015073..1015481,1015584..1015724,1015856..1015946,1016026..1016092,1016195..1016354,1016430..1016530,1016738..>1016977)	Acanthamoeba castellanii str. Neff	14924524
ACA1_071660	mRNA	ACA1_071660	NW_004457654.1	1017110	1021439	R	ACA1_071660	complement(join(<1017110..1017224,1017326..1017480,1017604..1017745,1017883..1018021,1018095..1018211,1018299..1018425,1018595..1018697,1018827..1018963,1019100..1019271,1019412..1019499,1019614..1019827,1019915..1020020,1020069..1020228,1020360..1020947,1021019..1021137,1021267..>1021439))	Acanthamoeba castellanii str. Neff	14924525
ACA1_071670	mRNA	ACA1_071670	NW_004457654.1	1022605	1023246	R	ACA1_071670	complement(<1022605..>1023246)	Acanthamoeba castellanii str. Neff	14924526
ACA1_071680	mRNA	ACA1_071680	NW_004457654.1	1023439	1028372	D	ACA1_071680	join(<1023439..1023731,1023818..1023896,1023973..1024114,1024228..1024321,1024443..1024520,1024664..1024858,1024974..1025153,1025227..1025357,1025470..1025652,1025779..1026017,1026119..1026391,1026484..1026546,1026648..1026783,1026873..1026950,1027042..1027147,1027342..1027387,1027479..1027636,1027739..>1028372)	Acanthamoeba castellanii str. Neff	14924527
ACA1_071690	mRNA	ACA1_071690	NW_004457654.1	1028641	1030669	D	ACA1_071690	join(<1028641..1028773,1028839..1028965,1029026..1029087,1029168..1029325,1029396..1029511,1029601..1029831,1029917..1030048,1030151..1030160,1030186..1030291,1030387..1030486,1030597..>1030669)	Acanthamoeba castellanii str. Neff	14924528
ACA1_071700	mRNA	ACA1_071700	NW_004457654.1	1031091	1031570	R	ACA1_071700	complement(<1031091..>1031570)	Acanthamoeba castellanii str. Neff	14924529
ACA1_071710	mRNA	ACA1_071710	NW_004457654.1	1031688	1032543	D	ACA1_071710	join(<1031688..1031933,1032033..1032119,1032212..1032314,1032479..>1032543)	Acanthamoeba castellanii str. Neff	14924530
ACA1_071720	mRNA	ACA1_071720	NW_004457654.1	1033498	1035107	R	ACA1_071720	complement(join(<1033498..1033551,1033625..1033746,1033823..1034009,1034086..1034174,1034256..1034332,1034397..1034508,1034575..1034779,1034876..1035077,1035094..>1035107))	Acanthamoeba castellanii str. Neff	14924531
ACA1_071730	mRNA	ACA1_071730	NW_004457654.1	1035479	1036548	D	ACA1_071730	join(<1035479..1035524,1035625..1035845,1035997..>1036548)	Acanthamoeba castellanii str. Neff	14924532
ACA1_071740	mRNA	ACA1_071740	NW_004457654.1	1036823	1037986	R	ACA1_071740	complement(join(<1036823..1036970,1037051..1037158,1037246..1037402,1037459..1037663,1037732..1037806,1037897..>1037986))	Acanthamoeba castellanii str. Neff	14924533
ACA1_071750	mRNA	ACA1_071750	NW_004457654.1	1038645	1039229	R	ACA1_071750	complement(join(<1038645..1038715,1038789..1038823,1038887..1038975,1039200..>1039229))	Acanthamoeba castellanii str. Neff	14924534
ACA1_071760	mRNA	ACA1_071760	NW_004457654.1	1039343	1040896	D	ACA1_071760	join(<1039343..1039370,1039451..1039549,1039616..1039691,1039772..1039878,1039958..1040049,1040112..1040216,1040295..1040422,1040491..1040620,1040692..1040755,1040826..>1040896)	Acanthamoeba castellanii str. Neff	14924535
ACA1_071770	mRNA	ACA1_071770	NW_004457654.1	1041157	1046452	D	ACA1_071770	join(<1041157..1041277,1041459..1041572,1041665..1041760,1041882..1042999,1043157..1043273,1043364..1043954,1044042..1044156,1044259..1045345,1045453..1045511,1045656..1045717,1045808..1045909,1046053..1046160,1046282..>1046452)	Acanthamoeba castellanii str. Neff	14924536
ACA1_071780	mRNA	ACA1_071780	NW_004457654.1	1046937	1049131	D	ACA1_071780	join(<1046937..1046964,1047104..1047186,1047313..1047477,1047578..1047745,1047834..1048202,1048334..1049014,1049117..>1049131)	Acanthamoeba castellanii str. Neff	14924537
ACA1_071790	mRNA	ACA1_071790	NW_004457654.1	1050865	1053802	R	ACA1_071790	complement(join(<1050865..1051093,1051189..1051366,1051470..1051571,1051738..1051841,1051953..1052038,1052177..1052282,1052382..1052506,1052604..1052819,1053025..1053122,1053223..1053337,1053488..1053595,1053689..>1053802))	Acanthamoeba castellanii str. Neff	14924538
ACA1_071800	mRNA	ACA1_071800	NW_004457654.1	1053902	1056659	D	ACA1_071800	join(<1053902..1054008,1054208..1054418,1054542..1054873,1054964..1055182,1055262..1055413,1055539..1055654,1055789..1055986,1056112..1056447,1056510..>1056659)	Acanthamoeba castellanii str. Neff	14924539
ACA1_071810	mRNA	ACA1_071810	NW_004457654.1	1057232	1058236	D	ACA1_071810	join(<1057232..1057347,1057459..1057655,1057747..1057874,1057965..1058089,1058164..>1058236)	Acanthamoeba castellanii str. Neff	14924540
ACA1_071820	mRNA	ACA1_071820	NW_004457654.1	1059012	1060117	D	ACA1_071820	join(<1059012..1059316,1059462..1059505,1059538..1059587,1059893..>1060117)	Acanthamoeba castellanii str. Neff	14924541
ACA1_071830	mRNA	ACA1_071830	NW_004457654.1	1060515	1076039	D	ACA1_071830	join(<1060515..1060640,1060798..1060955,1061015..1061104,1061189..1061327,1061451..1061478,1061659..1061809,1061920..1062094,1062180..1062293,1062376..1062499,1062600..1062682,1062810..1062997,1063126..1063238,1063358..1063496,1063588..1063976,1064085..1064335,1064426..1064594,1064714..1064960,1065030..1065562,1065649..1065773,1065871..1065967,1066054..1066251,1066349..1066465,1066550..1066674,1066777..1067363,1067459..1067814,1067941..1068059,1068138..1068274,1068385..1068532,1068608..1068686,1068764..1069020,1069114..1069218,1069294..1069549,1069640..1069786,1069866..1070077,1070198..1070328,1070434..1070551,1070666..1070841,1070967..1071048,1071121..1071412,1071546..1071673,1071753..1071873,1071961..1072108,1072195..1072439,1072507..1072673,1072762..1072872,1072970..1073226,1073317..1073385,1073483..1073659,1073735..1074158,1074245..1074343,1074410..1074533,1074634..1074743,1074836..1074937,1075127..1075309,1075400..1075491,1075605..1075724,1075838..>1076039)	Acanthamoeba castellanii str. Neff	14924542
ACA1_071840	mRNA	ACA1_071840	NW_004457654.1	1076753	1081987	D	ACA1_071840	join(<1076753..1077016,1077122..1077259,1077418..1077470,1077568..1077619,1077708..1077782,1077848..1078458,1078544..1078679,1078837..1079679,1079750..1079869,1079950..1080127,1080299..1080462,1080649..1080731,1080973..1081139,1081265..1081343,1081407..1081553,1081789..>1081987)	Acanthamoeba castellanii str. Neff	14924543
ACA1_071850	mRNA	ACA1_071850	NW_004457654.1	1082413	1082773	D	ACA1_071850	join(<1082413..1082472,1082566..1082706,1082726..>1082773)	Acanthamoeba castellanii str. Neff	14924544
ACA1_071860	mRNA	ACA1_071860	NW_004457654.1	1082908	1083604	D	ACA1_071860	join(<1082908..1083109,1083167..1083332,1083415..>1083604)	Acanthamoeba castellanii str. Neff	14924545
ACA1_071870	mRNA	ACA1_071870	NW_004457654.1	1083839	1093596	D	ACA1_071870	join(<1083839..1084076,1084280..1084785,1084893..1085095,1085217..1085326,1085432..1085711,1085837..1086067,1086138..1086440,1086528..1086663,1086785..1087525,1087601..1087680,1087760..1087896,1088015..1088232,1088355..1088496,1088600..1088931,1089031..1089171,1089278..1089454,1089572..1089781,1089878..1090038,1090231..1090420,1090595..1090883,1091092..1091361,1091446..1091662,1091771..1091786,1091849..1091944,1092048..1092237,1092316..1092413,1092490..1092938,1093031..1093148,1093167..1093353,1093427..>1093596)	Acanthamoeba castellanii str. Neff	14924546
ACA1_071880	mRNA	ACA1_071880	NW_004457654.1	1093755	1094391	D	ACA1_071880	join(<1093755..1093833,1093987..1094129,1094230..>1094391)	Acanthamoeba castellanii str. Neff	14924547
ACA1_071890	mRNA	ACA1_071890	NW_004457654.1	1095600	1098229	R	ACA1_071890	complement(join(<1095600..1095783,1095871..1096037,1096134..1096211,1096326..1096793,1096879..1097009,1097142..1097258,1097390..1097505,1097686..1097736,1097894..1097992,1098111..>1098229))	Acanthamoeba castellanii str. Neff	14924548
ACA1_071900	mRNA	ACA1_071900	NW_004457654.1	1098967	1099548	D	ACA1_071900	<1098967..>1099548	Acanthamoeba castellanii str. Neff	14924549
ACA1_071910	mRNA	ACA1_071910	NW_004457654.1	1099937	1109554	R	ACA1_071910	complement(join(<1099937..1100187,1100330..1100489,1100589..1100754,1100853..1100932,1101041..1101163,1101263..1101352,1101510..1101644,1101741..1101833,1101915..1102081,1102175..1102315,1102411..1102771,1102867..1103050,1103122..1103413,1103516..1103663,1103749..1103843,1103929..1104019,1104122..1104368,1104449..1104761,1104871..1105018,1105109..1105246,1105323..1105436,1105551..1106098,1106189..1106587,1106701..1106877,1106982..1107202,1107288..1107358,1107438..1107679,1107759..1107928,1108000..1108186,1108265..1108439,1108528..1109276,1109527..>1109554))	Acanthamoeba castellanii str. Neff	14924550
ACA1_071920	mRNA	ACA1_071920	NW_004457654.1	1109863	1111328	D	ACA1_071920	join(<1109863..1110024,1110096..1110278,1110355..1110447,1110526..1110655,1110741..1110889,1110968..1111157,1111261..>1111328)	Acanthamoeba castellanii str. Neff	14924551
ACA1_071930	mRNA	ACA1_071930	NW_004457654.1	1111446	1112028	D	ACA1_071930	join(<1111446..1111453,1111523..1111617,1111740..1111870,1111939..>1112028)	Acanthamoeba castellanii str. Neff	14924552
ACA1_071940	mRNA	ACA1_071940	NW_004457654.1	1112527	1114429	D	ACA1_071940	join(<1112527..1112934,1113024..1113136,1113237..1113310,1113384..1113454,1113515..1113642,1113705..1113883,1113973..1114147,1114249..>1114429)	Acanthamoeba castellanii str. Neff	14924553
ACA1_071950	mRNA	ACA1_071950	NW_004457654.1	1114518	1115634	R	ACA1_071950	complement(join(<1114518..1114583,1114704..1114828,1114915..1114949,1115019..1115104,1115191..1115441,1115535..>1115634))	Acanthamoeba castellanii str. Neff	14924554
ACA1_071960	mRNA	ACA1_071960	NW_004457654.1	1115742	1117100	D	ACA1_071960	join(<1115742..1116026,1116177..1116432,1116490..1116549,1116643..1116763,1116848..>1117100)	Acanthamoeba castellanii str. Neff	14924555
ACA1_071970	mRNA	ACA1_071970	NW_004457654.1	1117479	1120335	D	ACA1_071970	join(<1117479..1117711,1117819..1117984,1118085..1118299,1118374..1118486,1118566..1118651,1118743..1118900,1118981..1119107,1119225..1119406,1119478..1119568,1119654..1119732,1119830..1119972,1120079..1120154,1120211..>1120335)	Acanthamoeba castellanii str. Neff	14924556
ACA1_071980	mRNA	ACA1_071980	NW_004457654.1	1120556	1121889	D	ACA1_071980	join(<1120556..1120685,1120774..1120962,1121056..1121157,1121274..1121500,1121590..1121679,1121773..>1121889)	Acanthamoeba castellanii str. Neff	14924557
ACA1_071990	mRNA	ACA1_071990	NW_004457654.1	1122152	1122523	R	ACA1_071990	complement(<1122152..>1122523)	Acanthamoeba castellanii str. Neff	14924558
ACA1_072000	mRNA	ACA1_072000	NW_004457654.1	1122966	1124421	R	ACA1_072000	complement(join(<1122966..1123353,1123432..1123600,1123649..1123733,1123930..>1124421))	Acanthamoeba castellanii str. Neff	14924559
ACA1_072010	mRNA	ACA1_072010	NW_004457654.1	1125798	1126456	R	ACA1_072010	complement(join(<1125798..1125928,1126076..1126168,1126250..1126293,1126377..>1126456))	Acanthamoeba castellanii str. Neff	14924560
ACA1_072020	mRNA	ACA1_072020	NW_004457654.1	1126620	1132333	R	ACA1_072020	complement(join(<1126620..1126773,1126877..1127156,1127248..1127353,1127472..1127648,1127762..1127843,1127935..1128029,1128132..1128277,1128381..1128510,1128651..1128854,1129012..1129099,1129188..1130035,1130135..1130415,1130483..1130669,1130767..1130972,1131044..1131194,1131306..1131486,1131583..1131694,1131797..1131962,1132019..1132094,1132254..>1132333))	Acanthamoeba castellanii str. Neff	14924561
ACA1_072030	mRNA	ACA1_072030	NW_004457654.1	1132732	1135964	D	ACA1_072030	join(<1132732..1133163,1133325..1133457,1133642..1133866,1133987..1134270,1134384..1134524,1134682..1134975,1135086..1135295,1135393..1135588,1135667..1135779,1135851..>1135964)	Acanthamoeba castellanii str. Neff	14924562
ACA1_072040	mRNA	ACA1_072040	NW_004457654.1	1136109	1136476	R	ACA1_072040	complement(join(<1136109..1136269,1136338..>1136476))	Acanthamoeba castellanii str. Neff	14924563
ACA1_072050	mRNA	ACA1_072050	NW_004457654.1	1137044	1138526	D	ACA1_072050	join(<1137044..1137824,1137895..1138164,1138246..1138336,1138460..>1138526)	Acanthamoeba castellanii str. Neff	14924564
ACA1_072060	mRNA	ACA1_072060	NW_004457654.1	1138838	1140133	D	ACA1_072060	<1138838..>1140133	Acanthamoeba castellanii str. Neff	14924565
ACA1_072070	mRNA	ACA1_072070	NW_004457654.1	1140321	1140793	D	ACA1_072070	join(<1140321..1140512,1140608..>1140793)	Acanthamoeba castellanii str. Neff	14924566
ACA1_072080	mRNA	ACA1_072080	NW_004457654.1	1140931	1143814	R	ACA1_072080	complement(join(<1140931..1141072,1141179..1141306,1141329..1141368,1141466..1141582,1141652..1141865,1141941..1142063,1142155..1142229,1142309..1142460,1142533..1142717,1142822..1143006,1143104..1143180,1143251..1143399,1143482..1143656,1143723..>1143814))	Acanthamoeba castellanii str. Neff	14924567
ACA1_072090	mRNA	ACA1_072090	NW_004457654.1	1143999	1145236	R	ACA1_072090	complement(join(<1143999..1144020,1144105..1144182,1144302..1144464,1144559..1144642,1144783..>1145236))	Acanthamoeba castellanii str. Neff	14924568
ACA1_072100	mRNA	ACA1_072100	NW_004457654.1	1145559	1146708	D	ACA1_072100	join(<1145559..1145626,1145741..1145991,1146054..1146398,1146479..>1146708)	Acanthamoeba castellanii str. Neff	14924569
ACA1_072110	mRNA	ACA1_072110	NW_004457654.1	1147123	1150318	D	ACA1_072110	join(<1147123..1147333,1147476..1147773,1147922..1148118,1148217..1148317,1148401..1148524,1148650..1148822,1148912..1149115,1149209..1149304,1149404..1149695,1149797..1149919,1150024..1150136,1150241..>1150318)	Acanthamoeba castellanii str. Neff	14924570
ACA1_072120	mRNA	ACA1_072120	NW_004457654.1	1150756	1151083	D	ACA1_072120	join(<1150756..1150940,1151032..>1151083)	Acanthamoeba castellanii str. Neff	14924571
ACA1_072130	mRNA	ACA1_072130	NW_004457654.1	1152366	1158068	D	ACA1_072130	join(<1152366..1152519,1152596..1152690,1152799..1153244,1153421..1153530,1153606..1153746,1153831..1153967,1154072..1154128,1154236..1154328,1154423..1154723,1154822..1154912,1154986..1155064,1155159..1155293,1155367..1155507,1155643..1155718,1155809..1156107,1156375..1156532,1156640..1156772,1156817..1156910,1156992..1157202,1157275..1157376,1157484..1157588,1157678..>1158068)	Acanthamoeba castellanii str. Neff	14924572
ACA1_072140	mRNA	ACA1_072140	NW_004457654.1	1158176	1158894	R	ACA1_072140	complement(join(<1158176..1158545,1158677..>1158894))	Acanthamoeba castellanii str. Neff	14924573
ACA1_072150	mRNA	ACA1_072150	NW_004457654.1	1159131	1159817	R	ACA1_072150	complement(join(<1159131..1159325,1159355..1159387,1159425..>1159817))	Acanthamoeba castellanii str. Neff	14924574
ACA1_072160	mRNA	ACA1_072160	NW_004457654.1	1160065	1164065	D	ACA1_072160	join(<1160065..1160134,1160205..1160354,1160442..1160549,1160675..1160837,1160946..1161060,1161163..1161247,1161330..1161421,1161507..1161621,1161660..1161911,1162069..1162484,1162588..1163003,1163093..>1164065)	Acanthamoeba castellanii str. Neff	14924575
ACA1_072170	mRNA	ACA1_072170	NW_004457654.1	1164458	1169695	D	ACA1_072170	join(<1164458..1164874,1164971..1165180,1165320..1165388,1165494..1165594,1165695..1165790,1165883..1165968,1166083..1166213,1166291..1166370,1166477..1166590,1166699..1166828,1166909..1167010,1167126..1167211,1167313..1167412,1167494..1167985,1168102..1168230,1168333..1168500,1168567..1168631,1168712..1168814,1168902..1169055,1169129..1169235,1169317..1169429,1169545..1169608,1169666..>1169695)	Acanthamoeba castellanii str. Neff	14924576
ACA1_072180	mRNA	ACA1_072180	NW_004457654.1	1169839	1170225	R	ACA1_072180	complement(join(<1169839..1169997,1170070..>1170225))	Acanthamoeba castellanii str. Neff	14924577
ACA1_072190	mRNA	ACA1_072190	NW_004457654.1	1170642	1173298	D	ACA1_072190	join(<1170642..1170843,1170923..1170945,1171146..1171229,1171297..1171464,1171568..1171921,1172084..1172306,1172381..1172451,1172576..1172653,1172772..1172795,1172878..1173042,1173185..>1173298)	Acanthamoeba castellanii str. Neff	14924578
ACA1_072200	mRNA	ACA1_072200	NW_004457654.1	1173470	1174767	D	ACA1_072200	join(<1173470..1173627,1173726..1173855,1173988..>1174767)	Acanthamoeba castellanii str. Neff	14924579
ACA1_072210	mRNA	ACA1_072210	NW_004457654.1	1176765	1177473	D	ACA1_072210	join(<1176765..1176886,1176969..1177035,1177134..1177179,1177280..1177354,1177448..>1177473)	Acanthamoeba castellanii str. Neff	14924580
ACA1_072220	mRNA	ACA1_072220	NW_004457654.1	1177803	1178468	R	ACA1_072220	complement(join(<1177803..1178196,1178272..>1178468))	Acanthamoeba castellanii str. Neff	14924581
ACA1_072230	mRNA	ACA1_072230	NW_004457654.1	1178689	1179420	D	ACA1_072230	join(<1178689..1178886,1178973..1179048,1179150..1179233,1179326..>1179420)	Acanthamoeba castellanii str. Neff	14924582
ACA1_072240	mRNA	ACA1_072240	NW_004457654.1	1180149	1180792	D	ACA1_072240	join(<1180149..1180218,1180262..1180431,1180529..1180600,1180655..>1180792)	Acanthamoeba castellanii str. Neff	14924583
ACA1_072250	mRNA	ACA1_072250	NW_004457654.1	1180880	1181597	R	ACA1_072250	complement(join(<1180880..1181062,1181159..1181392,1181502..>1181597))	Acanthamoeba castellanii str. Neff	14924584
ACA1_072260	mRNA	ACA1_072260	NW_004457654.1	1181659	1186376	R	ACA1_072260	complement(join(<1181659..1181931,1182002..1182132,1182199..1182349,1182586..1182725,1182818..1182913,1183066..1183235,1183328..1183442,1183512..1183673,1183807..1183903,1183978..1184111,1184206..1184536,1184557..1184641,1184696..1184767,1184895..1184977,1185011..1185095,1185175..1185287,1185359..1185460,1185554..1185631,1185713..1185761,1185835..1186039,1186121..>1186376))	Acanthamoeba castellanii str. Neff	14924585
ACA1_072270	mRNA	ACA1_072270	NW_004457654.1	1187171	1187450	D	ACA1_072270	join(<1187171..1187392,1187424..>1187450)	Acanthamoeba castellanii str. Neff	14924586
ACA1_072280	mRNA	ACA1_072280	NW_004457654.1	1187917	1188301	D	ACA1_072280	join(<1187917..1187984,1188058..>1188301)	Acanthamoeba castellanii str. Neff	14924587
ACA1_072290	mRNA	ACA1_072290	NW_004457654.1	1188395	1192842	R	ACA1_072290	complement(join(<1188395..1188505,1188602..1188701,1188785..1188929,1189034..1189293,1189365..1189453,1189534..1189742,1189821..1189937,1190023..1190116,1190220..1190434,1190516..1190858,1190948..1191097,1191415..1191686,1191772..1191832,1191878..1191905,1191985..1192017,1192086..1192207,1192341..1192497,1192580..>1192842))	Acanthamoeba castellanii str. Neff	14924588
ACA1_072300	mRNA	ACA1_072300	NW_004457654.1	1192983	1194002	D	ACA1_072300	join(<1192983..1193072,1193112..1193209,1193588..>1194002)	Acanthamoeba castellanii str. Neff	14924589
ACA1_072310	mRNA	ACA1_072310	NW_004457654.1	1194570	1197864	D	ACA1_072310	join(<1194570..1195008,1195090..1195159,1195240..1195361,1195422..1195486,1195567..1195660,1195785..1197303,1197393..>1197864)	Acanthamoeba castellanii str. Neff	14924590
ACA1_072320	mRNA	ACA1_072320	NW_004457654.1	1198124	1198561	R	ACA1_072320	complement(join(<1198124..1198159,1198244..>1198561))	Acanthamoeba castellanii str. Neff	14924591
ACA1_072330	mRNA	ACA1_072330	NW_004457654.1	1198894	1202959	R	ACA1_072330	complement(join(<1198894..1199062,1199152..1199246,1199325..1199537,1199609..1199767,1199842..1200199,1200291..1200700,1200768..1200892,1200981..1201257,1201348..1201491,1201579..1201929,1201999..1202654,1202788..>1202959))	Acanthamoeba castellanii str. Neff	14924592
ACA1_072340	mRNA	ACA1_072340	NW_004457654.1	1203313	1205489	D	ACA1_072340	join(<1203313..1203643,1203726..1203770,1203883..1204022,1204097..1204208,1204277..1204374,1204443..1204507,1204601..1204709,1204782..1204849,1204930..1205021,1205094..1205236,1205258..1205374,1205460..>1205489)	Acanthamoeba castellanii str. Neff	14924593
ACA1_072350	mRNA	ACA1_072350	NW_004457654.1	1205824	1208835	D	ACA1_072350	join(<1205824..1206003,1206087..1206200,1206320..1206476,1206558..1206660,1206757..1206844,1206922..1206953,1207092..1207222,1207283..1207506,1207587..1207809,1207873..1208292,1208371..1208662,1208757..>1208835)	Acanthamoeba castellanii str. Neff	14924594
ACA1_072360	mRNA	ACA1_072360	NW_004457654.1	1209570	1211146	D	ACA1_072360	join(<1209570..1210484,1210587..1210707,1210791..>1211146)	Acanthamoeba castellanii str. Neff	14924595
ACA1_072370	mRNA	ACA1_072370	NW_004457654.1	1211292	1213539	R	ACA1_072370	complement(join(<1211292..1211435,1211604..1211698,1211823..1211942,1212048..1212198,1212293..1212582,1212662..1212767,1212853..1212946,1213053..1213141,1213217..1213329,1213446..>1213539))	Acanthamoeba castellanii str. Neff	14924596
ACA1_072480	mRNA	ACA1_072480	NW_004457654.1	1214027	1214775	R	ACA1_072480	complement(join(<1214027..1214252,1214346..1214424,1214499..>1214775))	Acanthamoeba castellanii str. Neff	14924597
ACA1_072490	mRNA	ACA1_072490	NW_004457654.1	1215111	1216525	D	ACA1_072490	join(<1215111..1215257,1215362..1215435,1215499..1215656,1215745..1215932,1216010..1216363,1216424..>1216525)	Acanthamoeba castellanii str. Neff	14924598
ACA1_072500	mRNA	ACA1_072500	NW_004457654.1	1216598	1218898	R	ACA1_072500	complement(join(<1216598..1216627,1216720..1216853,1216924..1216961,1217049..1217166,1217260..1217354,1217429..1217655,1217738..1217831,1217930..1218019,1218087..1218524,1218612..>1218898))	Acanthamoeba castellanii str. Neff	14924599
ACA1_072510	mRNA	ACA1_072510	NW_004457654.1	1219227	1219625	R	ACA1_072510	complement(<1219227..>1219625)	Acanthamoeba castellanii str. Neff	14924600
ACA1_072520	mRNA	ACA1_072520	NW_004457654.1	1219927	1220666	R	ACA1_072520	complement(join(<1219927..1220576,1220648..>1220666))	Acanthamoeba castellanii str. Neff	14924601
ACA1_072530	mRNA	ACA1_072530	NW_004457654.1	1220769	1221183	D	ACA1_072530	join(<1220769..1220959,1221039..>1221183)	Acanthamoeba castellanii str. Neff	14924602
ACA1_072540	mRNA	ACA1_072540	NW_004457654.1	1221294	1221628	R	ACA1_072540	complement(join(<1221294..1221448,1221529..>1221628))	Acanthamoeba castellanii str. Neff	14924603
ACA1_072550	mRNA	ACA1_072550	NW_004457654.1	1221762	1222950	D	ACA1_072550	join(<1221762..1221928,1222013..1222105,1222196..1222337,1222460..1222606,1222729..1222803,1222831..>1222950)	Acanthamoeba castellanii str. Neff	14924604
ACA1_072560	mRNA	ACA1_072560	NW_004457654.1	1223188	1224335	D	ACA1_072560	join(<1223188..1223434,1223545..1223673,1223773..1223906,1224032..1224111,1224218..>1224335)	Acanthamoeba castellanii str. Neff	14924605
ACA1_072570	mRNA	ACA1_072570	NW_004457654.1	1224590	1226665	D	ACA1_072570	join(<1224590..1224712,1224781..1224806,1224911..1225015,1225150..1225240,1225426..1225551,1225632..1225746,1225888..1226004,1226081..1226173,1226260..1226318,1226426..>1226665)	Acanthamoeba castellanii str. Neff	14924606
ACA1_072580	mRNA	ACA1_072580	NW_004457654.1	1226762	1228889	R	ACA1_072580	complement(join(<1226762..1226984,1227071..1227144,1227231..1227304,1227392..1227505,1227586..1227708,1227840..1227906,1228044..1228174,1228280..1228408,1228535..1228642,1228766..>1228889))	Acanthamoeba castellanii str. Neff	14924607
ACA1_072590	mRNA	ACA1_072590	NW_004457654.1	1229202	1231089	R	ACA1_072590	complement(join(<1229202..1229364,1229479..1229573,1229650..1229760,1229850..1229924,1230015..1230128,1230226..>1231089))	Acanthamoeba castellanii str. Neff	14924608
ACA1_072600	mRNA	ACA1_072600	NW_004457654.1	1231373	1233318	R	ACA1_072600	complement(join(<1231373..1231516,1231604..1231804,1231871..1232101,1232297..1232475,1232537..1232628,1232717..1232813,1232942..1233017,1233104..1233145,1233223..>1233318))	Acanthamoeba castellanii str. Neff	14924609
ACA1_072610	mRNA	ACA1_072610	NW_004457654.1	1233418	1234804	D	ACA1_072610	join(<1233418..1233631,1233729..1233991,1234104..1234418,1234503..1234702,1234756..>1234804)	Acanthamoeba castellanii str. Neff	14924610
ACA1_072630	mRNA	ACA1_072630	NW_004457654.1	1239646	1240436	D	ACA1_072630	join(<1239646..1239801,1239911..1239961,1239998..1240176,1240250..>1240436)	Acanthamoeba castellanii str. Neff	14924612
ACA1_072640	mRNA	ACA1_072640	NW_004457654.1	1240483	1241946	R	ACA1_072640	complement(<1240483..>1241946)	Acanthamoeba castellanii str. Neff	14924613
ACA1_072650	mRNA	ACA1_072650	NW_004457654.1	1243225	1245290	D	ACA1_072650	join(<1243225..1243264,1243385..1243504,1243609..1244646,1244780..1244867,1244969..>1245290)	Acanthamoeba castellanii str. Neff	14924614
ACA1_072660	mRNA	ACA1_072660	NW_004457654.1	1245528	1248795	D	ACA1_072660	join(<1245528..1245829,1245896..1246040,1246119..1246274,1246350..1246556,1246617..1246724,1246793..1246978,1247119..1247299,1247385..1247629,1247711..1247825,1247885..1248467,1248582..>1248795)	Acanthamoeba castellanii str. Neff	14924615
ACA1_072670	mRNA	ACA1_072670	NW_004457654.1	1249030	1251597	D	ACA1_072670	<1249030..>1251597	Acanthamoeba castellanii str. Neff	14924616
ACA1_072680	mRNA	ACA1_072680	NW_004457654.1	1251892	1254058	D	ACA1_072680	join(<1251892..1251988,1252000..1252115,1252216..1252253,1252428..1252636,1252722..1252840,1252957..1253144,1253242..1253350,1253438..1253587,1253690..1253897,1253994..>1254058)	Acanthamoeba castellanii str. Neff	14924617
ACA1_072690	mRNA	ACA1_072690	NW_004457654.1	1254279	1256074	D	ACA1_072690	join(<1254279..1254619,1254747..1254859,1254948..1255092,1255217..1255313,1255414..1255506,1255617..1255704,1255803..>1256074)	Acanthamoeba castellanii str. Neff	14924618
ACA1_072700	mRNA	ACA1_072700	NW_004457654.1	1256220	1270616	R	ACA1_072700	complement(join(<1256220..1256378,1256499..1256564,1256646..1256773,1256857..1256962,1257084..1257243,1257493..1257619,1257708..1257800,1257927..1258082,1258246..1258292,1258388..1258521,1258579..1258778,1258849..1258925,1259058..1259152,1259229..1259321,1259419..1259533,1259662..1259760,1260077..1260234,1260347..1260546,1260565..1260755,1260842..1260941,1261041..1261131,1261207..1261273,1261426..1262321,1262424..1262567,1262693..1262821,1262943..1263044,1263158..1263229,1263266..1263406,1263488..1263676,1263792..1263987,1264053..1264295,1264376..1264534,1264615..1264710,1264792..1264906,1265026..1265118,1265226..1265377,1265508..1265831,1266040..1266300,1266434..1266666,1266743..1266818,1266896..1266970,1267028..1267101,1267201..1267293,1267384..1269549,1269579..1269616,1269919..1270035,1270143..1270350,1270500..>1270616))	Acanthamoeba castellanii str. Neff	14924619
ACA1_072710	mRNA	ACA1_072710	NW_004457654.1	1271312	1274424	D	ACA1_072710	join(<1271312..1272012,1272094..1273136,1273240..1273604,1273726..>1274424)	Acanthamoeba castellanii str. Neff	14924620
ACA1_072720	mRNA	ACA1_072720	NW_004457654.1	1274445	1277981	R	ACA1_072720	complement(join(<1274445..1274659,1274729..1274939,1275102..1275184,1275284..1275398,1275502..1275601,1275697..1275899,1275995..1276119,1276225..1276379,1276461..1276509,1276621..1276715,1276806..1276927,1277043..>1277981))	Acanthamoeba castellanii str. Neff	14924621
ACA1_072730	mRNA	ACA1_072730	NW_004457654.1	1278598	1281325	D	ACA1_072730	join(<1278598..1278745,1278849..1278924,1279010..1279134,1279205..1279416,1279511..1279689,1279774..1279869,1279959..1280079,1280156..1280239,1280325..1280453,1280529..1280590,1280723..1280810,1280895..1281001,1281087..1281176,1281271..>1281325)	Acanthamoeba castellanii str. Neff	14924622
ACA1_072740	mRNA	ACA1_072740	NW_004457654.1	1281533	1284782	R	ACA1_072740	complement(join(<1281533..1281674,1281774..1281911,1282057..1282269,1282367..1282481,1282596..1283123,1283250..1283514,1283609..1283918,1284040..1284239,1284260..1284391,1284488..1284672,1284761..>1284782))	Acanthamoeba castellanii str. Neff	14924623
ACA1_072750	mRNA	ACA1_072750	NW_004457654.1	1284922	1285468	D	ACA1_072750	join(<1284922..1284994,1285086..>1285468)	Acanthamoeba castellanii str. Neff	14924624
ACA1_072760	mRNA	ACA1_072760	NW_004457654.1	1285693	1288999	R	ACA1_072760	complement(join(<1285693..1285997,1286082..1286215,1286324..1286462,1286547..1286709,1286835..1286953,1287314..1287447,1287548..1287687,1287805..1288095,1288281..1288389,1288471..1288600,1288756..>1288999))	Acanthamoeba castellanii str. Neff	14924625
ACA1_072770	mRNA	ACA1_072770	NW_004457654.1	1289399	1291533	R	ACA1_072770	complement(join(<1289399..1289454,1289529..1289668,1289756..1289862,1289953..1290144,1290223..1290339,1290404..1290735,1290820..1290872,1290964..1291177,1291308..>1291533))	Acanthamoeba castellanii str. Neff	14924626
ACA1_072780	mRNA	ACA1_072780	NW_004457654.1	1292747	1295906	R	ACA1_072780	complement(join(<1292747..1293191,1293350..1293517,1293600..1293916,1294017..1294118,1294226..1294294,1294426..1294498,1294592..1294740,1294849..1295081,1295168..1295243,1295422..1295537,1295654..>1295906))	Acanthamoeba castellanii str. Neff	14924627
ACA1_072790	mRNA	ACA1_072790	NW_004457654.1	1296178	1297964	R	ACA1_072790	complement(join(<1296178..1296537,1296646..1296712,1296864..1297013,1297096..1297232,1297320..1297522,1297626..1297669,1297750..>1297964))	Acanthamoeba castellanii str. Neff	14924628
ACA1_072800	mRNA	ACA1_072800	NW_004457654.1	1298540	1300581	D	ACA1_072800	join(<1298540..1298689,1298774..1298944,1299028..1299384,1299492..1299860,1299928..1300174,1300247..>1300581)	Acanthamoeba castellanii str. Neff	14924629
ACA1_072810	mRNA	ACA1_072810	NW_004457654.1	1300762	1302373	D	ACA1_072810	join(<1300762..1300841,1300930..1301123,1301214..1301293,1301386..1301500,1301574..1301668,1301751..1302045,1302195..>1302373)	Acanthamoeba castellanii str. Neff	14924630
ACA1_072820	mRNA	ACA1_072820	NW_004457654.1	1302521	1304300	R	ACA1_072820	complement(join(<1302521..1303017,1303116..1303316,1303421..1304121,1304230..>1304300))	Acanthamoeba castellanii str. Neff	14924631
ACA1_072830	mRNA	ACA1_072830	NW_004457654.1	1304578	1306145	R	ACA1_072830	complement(join(<1304578..1304977,1305058..1305203,1305310..1305449,1305631..1305710,1305802..>1306145))	Acanthamoeba castellanii str. Neff	14924632
ACA1_072840	mRNA	ACA1_072840	NW_004457654.1	1306369	1308386	D	ACA1_072840	join(<1306369..1306372,1306457..1307010,1307199..1307373,1307494..1307653,1307740..1307869,1307976..>1308386)	Acanthamoeba castellanii str. Neff	14924633
ACA1_072860	mRNA	ACA1_072860	NW_004457654.1	1314078	1316589	R	ACA1_072860	complement(join(<1314078..1314200,1314313..1314521,1314611..1314745,1314823..1314910,1314985..1315174,1315267..1315372,1315444..1315600,1315719..1315888,1315984..1316136,1316230..1316342,1316414..>1316589))	Acanthamoeba castellanii str. Neff	14924635
ACA1_072870	mRNA	ACA1_072870	NW_004457654.1	1316783	1321008	R	ACA1_072870	complement(join(<1316783..1316872,1316952..1317093,1317175..1317734,1317812..1317895,1317989..1318090,1318204..1318323,1318450..1318697,1318799..1318937,1319007..1319455,1319560..1319707,1319822..1319927,1320016..1320133,1320255..1320347,1320414..1320558,1320642..1320799,1320882..>1321008))	Acanthamoeba castellanii str. Neff	14924636
ACA1_072880	mRNA	ACA1_072880	NW_004457654.1	1321435	1323028	R	ACA1_072880	complement(join(<1321435..1322226,1322296..1322373,1322449..1322634,1322732..>1323028))	Acanthamoeba castellanii str. Neff	14924637
ACA1_072890	mRNA	ACA1_072890	NW_004457654.1	1324374	1326452	D	ACA1_072890	join(<1324374..1324753,1324848..1325004,1325085..>1326452)	Acanthamoeba castellanii str. Neff	14924638
ACA1_072900	mRNA	ACA1_072900	NW_004457654.1	1326687	1329090	R	ACA1_072900	complement(join(<1326687..1326824,1326918..1327030,1327088..1327251,1327329..1327525,1327602..1327736,1327800..1327987,1328203..1328412,1328537..1328792,1328878..>1329090))	Acanthamoeba castellanii str. Neff	14924639
ACA1_072910	mRNA	ACA1_072910	NW_004457654.1	1329397	1330610	D	ACA1_072910	join(<1329397..1329401,1329478..1329598,1329715..1330190,1330313..>1330610)	Acanthamoeba castellanii str. Neff	14924640
ACA1_072920	mRNA	ACA1_072920	NW_004457654.1	1331177	1331538	R	ACA1_072920	complement(join(<1331177..1331215,1331227..1331312,1331397..>1331538))	Acanthamoeba castellanii str. Neff	14924641
ACA1_072930	mRNA	ACA1_072930	NW_004457654.1	1336107	1337108	D	ACA1_072930	join(<1336107..1336149,1336230..1336383,1336452..1336557,1336644..1336724,1336853..1336940,1337047..>1337108)	Acanthamoeba castellanii str. Neff	14924642
ACA1_072940	mRNA	ACA1_072940	NW_004457654.1	1337151	1339856	D	ACA1_072940	join(<1337151..1337458,1337567..1337756,1337853..1337933,1338200..1338242,1338338..1338453,1338531..1338611,1338689..1338826,1338899..1339165,1339238..1339449,1339532..1339607,1339689..>1339856)	Acanthamoeba castellanii str. Neff	14924643
ACA1_072950	mRNA	ACA1_072950	NW_004457654.1	1340121	1345867	D	ACA1_072950	join(<1340121..1340327,1340404..1340512,1340574..1340628,1340708..1340933,1341034..1341113,1341192..1341301,1341391..1341479,1341618..1341723,1341806..1341966,1342071..1342236,1342315..1342941,1343064..1343691,1343758..1343818,1343895..1344019,1344136..1344302,1344396..1344928,1345004..1345060,1345152..1345329,1345422..1345571,1345674..>1345867)	Acanthamoeba castellanii str. Neff	14924644
ACA1_072960	mRNA	ACA1_072960	NW_004457654.1	1346019	1347975	D	ACA1_072960	join(<1346019..1346124,1346196..1346287,1346399..1346497,1346679..1347071,1347200..1347284,1347345..1347446,1347577..1347710,1347778..>1347975)	Acanthamoeba castellanii str. Neff	14924645
ACA1_072970	mRNA	ACA1_072970	NW_004457654.1	1348555	1348782	R	ACA1_072970	complement(<1348555..>1348782)	Acanthamoeba castellanii str. Neff	14924646
ACA1_072980	mRNA	ACA1_072980	NW_004457654.1	1348962	1350225	R	ACA1_072980	complement(join(<1348962..1349139,1349234..1349346,1349459..1349704,1349793..1349916,1350025..1350107,1350205..>1350225))	Acanthamoeba castellanii str. Neff	14924647
ACA1_072990	mRNA	ACA1_072990	NW_004457654.1	1350377	1351387	R	ACA1_072990	complement(join(<1350377..1350480,1350573..1350925,1350997..1351043,1351113..1351204,1351303..>1351387))	Acanthamoeba castellanii str. Neff	14924648
ACA1_073000	mRNA	ACA1_073000	NW_004457654.1	1352056	1353068	D	ACA1_073000	join(<1352056..1352541,1352616..1352736,1352813..1352919,1353009..>1353068)	Acanthamoeba castellanii str. Neff	14924649
ACA1_073010	mRNA	ACA1_073010	NW_004457654.1	1353197	1355359	D	ACA1_073010	join(<1353197..1353355,1353429..1353595,1353673..1353772,1353861..1353935,1354260..1354392,1354485..1354608,1354885..1355001,1355263..>1355359)	Acanthamoeba castellanii str. Neff	14924650
ACA1_073020	mRNA	ACA1_073020	NW_004457654.1	1355451	1356376	R	ACA1_073020	complement(join(<1355451..1355571,1355647..1355820,1355898..>1356376))	Acanthamoeba castellanii str. Neff	14924651
ACA1_073030	mRNA	ACA1_073030	NW_004457654.1	1356513	1357442	R	ACA1_073030	complement(join(<1356513..1356638,1356774..1356905,1356989..1357091,1357180..>1357442))	Acanthamoeba castellanii str. Neff	14924652
ACA1_073040	mRNA	ACA1_073040	NW_004457654.1	1357546	1362111	R	ACA1_073040	complement(join(<1357546..1357890,1357990..1358111,1358190..1359836,1359928..1360090,1360197..1360319,1360412..1360518,1360606..1360996,1361090..1361150,1361241..1361345,1361415..1361467,1361481..1361662,1361745..>1362111))	Acanthamoeba castellanii str. Neff	14924653
ACA1_073050	mRNA	ACA1_073050	NW_004457654.1	1362270	1363113	D	ACA1_073050	join(<1362270..1362378,1362451..1362566,1362634..>1363113)	Acanthamoeba castellanii str. Neff	14924654
ACA1_073060	mRNA	ACA1_073060	NW_004457654.1	1363435	1364209	R	ACA1_073060	complement(join(<1363435..1363585,1363673..1363755,1363847..1363978,1364051..>1364209))	Acanthamoeba castellanii str. Neff	14924655
ACA1_073070	mRNA	ACA1_073070	NW_004457654.1	1364296	1365255	R	ACA1_073070	complement(join(<1364296..1364521,1364607..1364755,1364861..1365010,1365079..>1365255))	Acanthamoeba castellanii str. Neff	14924656
ACA1_073080	mRNA	ACA1_073080	NW_004457654.1	1365453	1366665	D	ACA1_073080	join(<1365453..1365591,1365665..1365842,1365900..1365981,1366050..1366226,1366306..>1366665)	Acanthamoeba castellanii str. Neff	14924657
ACA1_073090	mRNA	ACA1_073090	NW_004457654.1	1367634	1369954	D	ACA1_073090	join(<1367634..1368019,1368092..1368179,1368243..1368375,1368497..1368570,1368650..1368732,1368813..1368910,1369007..1369149,1369234..1369416,1369500..1369566,1369635..>1369954)	Acanthamoeba castellanii str. Neff	14924658
ACA1_073100	mRNA	ACA1_073100	NW_004457654.1	1370844	1372325	D	ACA1_073100	join(<1370844..1370905,1371242..>1372325)	Acanthamoeba castellanii str. Neff	14924659
ACA1_073110	mRNA	ACA1_073110	NW_004457654.1	1372547	1373442	R	ACA1_073110	complement(join(<1372547..1372745,1372810..1372877,1372940..1373010,1373066..1373170,1373225..1373318,1373371..>1373442))	Acanthamoeba castellanii str. Neff	14924660
ACA1_073120	mRNA	ACA1_073120	NW_004457654.1	1373743	1374845	R	ACA1_073120	complement(join(<1373743..1374354,1374419..1374743,1374814..>1374845))	Acanthamoeba castellanii str. Neff	14924661
ACA1_073230	mRNA	ACA1_073230	NW_004457654.1	1375439	1377292	R	ACA1_073230	complement(join(<1375439..1375556,1375654..1375727,1375800..1375871,1375983..1376077,1376162..1376309,1376416..1376453,1376537..1376617,1376707..1376835,1376902..1377131,1377189..>1377292))	Acanthamoeba castellanii str. Neff	14924662
ACA1_073240	mRNA	ACA1_073240	NW_004457654.1	1377456	1381331	R	ACA1_073240	complement(join(<1377456..1377956,1378027..1378127,1378168..1378357,1378436..1378546,1378627..1378734,1378835..1378984,1379056..1379153,1379228..1379324,1379416..1379658,1379749..1379817,1379906..1380051,1380130..1380283,1380352..1380474,1380598..1380650,1380744..1380785,1380877..1380973,1381044..>1381331))	Acanthamoeba castellanii str. Neff	14924663
ACA1_073250	mRNA	ACA1_073250	NW_004457654.1	1381720	1382974	R	ACA1_073250	complement(join(<1381720..1381723,1381809..1381976,1382099..1382122,1382203..1382736,1382820..>1382974))	Acanthamoeba castellanii str. Neff	14924664
ACA1_073260	mRNA	ACA1_073260	NW_004457654.1	1383301	1384227	R	ACA1_073260	complement(join(<1383301..1383317,1383392..1383558,1383649..1383846,1383920..>1384227))	Acanthamoeba castellanii str. Neff	14924665
ACA1_073270	mRNA	ACA1_073270	NW_004457654.1	1385465	1386626	D	ACA1_073270	join(<1385465..1385579,1385639..1385730,1385816..1385884,1385960..1386117,1386201..1386366,1386459..>1386626)	Acanthamoeba castellanii str. Neff	14924666
ACA1_073280	mRNA	ACA1_073280	NW_004457654.1	1386895	1388262	D	ACA1_073280	join(<1386895..1386941,1387052..1387092,1387154..1387315,1387386..1387447,1387526..1387607,1387734..1387935,1388013..>1388262)	Acanthamoeba castellanii str. Neff	14924667
ACA1_073290	mRNA	ACA1_073290	NW_004457654.1	1388317	1389390	R	ACA1_073290	complement(join(<1388317..1388397,1388467..1388583,1388696..1388772,1388854..1388927,1389015..1389127,1389214..1389263,1389339..>1389390))	Acanthamoeba castellanii str. Neff	14924668
ACA1_073300	mRNA	ACA1_073300	NW_004457654.1	1389470	1390663	R	ACA1_073300	complement(join(<1389470..1389490,1389602..1389685,1389781..1390006,1390094..1390373,1390462..>1390663))	Acanthamoeba castellanii str. Neff	14924669
ACA1_073310	mRNA	ACA1_073310	NW_004457654.1	1391704	1393139	D	ACA1_073310	join(<1391704..1391823,1391924..1392191,1392435..1392547,1392619..1392825,1392918..>1393139)	Acanthamoeba castellanii str. Neff	14924670
ACA1_073320	mRNA	ACA1_073320	NW_004457654.1	1393244	1394516	D	ACA1_073320	join(<1393244..1393286,1393393..1393453,1393544..1393673,1393755..1393892,1393987..1394081,1394158..1394336,1394437..>1394516)	Acanthamoeba castellanii str. Neff	14924671
ACA1_073330	mRNA	ACA1_073330	NW_004457654.1	1394676	1395230	R	ACA1_073330	complement(join(<1394676..1394732,1394817..>1395230))	Acanthamoeba castellanii str. Neff	14924672
ACA1_073340	mRNA	ACA1_073340	NW_004457654.1	1395743	1397103	R	ACA1_073340	complement(join(<1395743..1395943,1396015..1396107,1396178..1396409,1396473..1396719,1396788..>1397103))	Acanthamoeba castellanii str. Neff	14924673
ACA1_073350	mRNA	ACA1_073350	NW_004457654.1	1397292	1398935	D	ACA1_073350	join(<1397292..1397461,1397572..1397650,1397741..1397819,1397903..1398265,1398355..1398513,1398603..1398691,1398783..>1398935)	Acanthamoeba castellanii str. Neff	14924674
ACA1_073360	mRNA	ACA1_073360	NW_004457654.1	1399294	1400808	D	ACA1_073360	join(<1399294..1399332,1399458..1399518,1399631..>1400808)	Acanthamoeba castellanii str. Neff	14924675
ACA1_073370	mRNA	ACA1_073370	NW_004457654.1	1401203	1402154	D	ACA1_073370	join(<1401203..1401261,1401353..1401625,1401700..1402001,1402084..>1402154)	Acanthamoeba castellanii str. Neff	14924676
ACA1_073380	mRNA	ACA1_073380	NW_004457654.1	1402323	1406116	R	ACA1_073380	complement(join(<1402323..1402478,1402605..1403098,1403234..1403382,1403486..1403562,1403680..1403883,1403981..1404072,1404189..1404371,1404485..1404678,1404812..1404878,1404995..1405123,1405265..1405420,1405505..1405617,1405701..1405752,1405836..1405912,1406049..>1406116))	Acanthamoeba castellanii str. Neff	14924677
ACA1_073390	mRNA	ACA1_073390	NW_004457654.1	1406359	1408861	D	ACA1_073390	join(<1406359..1406652,1406761..1406786,1406908..1407043,1407146..1407210,1407336..1407453,1407539..1407693,1407796..1407927,1408013..1408116,1408206..1408282,1408363..1408426,1408521..1408654,1408721..>1408861)	Acanthamoeba castellanii str. Neff	14924678
ACA1_073400	mRNA	ACA1_073400	NW_004457654.1	1409148	1410310	D	ACA1_073400	join(<1409148..1409700,1409799..>1410310)	Acanthamoeba castellanii str. Neff	14924679
ACA1_073410	mRNA	ACA1_073410	NW_004457654.1	1410403	1412879	R	ACA1_073410	complement(join(<1410403..1410498,1410553..1410782,1410879..1411008,1411098..1411258,1411348..1411580,1411667..1412106,1412205..1412452,1412532..1412635,1412752..>1412879))	Acanthamoeba castellanii str. Neff	14924680
ACA1_073420	mRNA	ACA1_073420	NW_004457654.1	1413101	1415534	R	ACA1_073420	complement(join(<1413101..1413135,1413224..1413340,1413431..1413598,1413679..1413806,1413888..1414043,1414116..1414342,1414414..1414591,1414670..1414860,1415007..1415150,1415235..>1415534))	Acanthamoeba castellanii str. Neff	14924681
ACA1_073430	mRNA	ACA1_073430	NW_004457654.1	1416099	1417828	D	ACA1_073430	join(<1416099..1416587,1416833..>1417828)	Acanthamoeba castellanii str. Neff	14924682
ACA1_073440	mRNA	ACA1_073440	NW_004457654.1	1418248	1420538	D	ACA1_073440	join(<1418248..1418405,1418513..1418673,1418753..1418838,1418923..1419037,1419129..1419224,1419296..1419519,1419613..1419803,1419937..1420076,1420150..>1420538)	Acanthamoeba castellanii str. Neff	14924683
ACA1_073450	mRNA	ACA1_073450	NW_004457654.1	1420654	1422163	D	ACA1_073450	join(<1420654..1420926,1421071..1421342,1421425..1421935,1422014..>1422163)	Acanthamoeba castellanii str. Neff	14924684
ACA1_073460	mRNA	ACA1_073460	NW_004457654.1	1422790	1425285	R	ACA1_073460	complement(join(<1422790..1423073,1423178..1423343,1423457..1424475,1424721..>1425285))	Acanthamoeba castellanii str. Neff	14924685
ACA1_073470	mRNA	ACA1_073470	NW_004457654.1	1425555	1426391	D	ACA1_073470	<1425555..>1426391	Acanthamoeba castellanii str. Neff	14924686
ACA1_073480	mRNA	ACA1_073480	NW_004457654.1	1426579	1427313	R	ACA1_073480	complement(<1426579..>1427313)	Acanthamoeba castellanii str. Neff	14924687
ACA1_073490	mRNA	ACA1_073490	NW_004457654.1	1427400	1429663	R	ACA1_073490	complement(join(<1427400..1427594,1427684..1427826,1427906..1427966,1428067..1428195,1428276..1428395,1428471..1428668,1428735..1428891,1428975..1429108,1429204..1429254,1429347..1429409,1429610..>1429663))	Acanthamoeba castellanii str. Neff	14924688
ACA1_073500	mRNA	ACA1_073500	NW_004457654.1	1430012	1432186	D	ACA1_073500	join(<1430012..1430066,1430177..1430256,1430346..1430549,1430655..1430915,1431018..1431132,1431228..1431436,1431517..1431593,1431708..1431819,1431889..1431944,1432045..>1432186)	Acanthamoeba castellanii str. Neff	14924689
ACA1_073510	mRNA	ACA1_073510	NW_004457654.1	1432346	1433500	R	ACA1_073510	complement(join(<1432346..1432606,1432690..1432814,1432918..1433086,1433213..>1433500))	Acanthamoeba castellanii str. Neff	14924690
ACA1_073520	mRNA	ACA1_073520	NW_004457654.1	1433783	1436494	D	ACA1_073520	join(<1433783..1433804,1433894..1433996,1434137..1434223,1434383..1434503,1434596..1434658,1434774..1434880,1434998..1435127,1435267..1435485,1435572..1435692,1435811..1435974,1436057..1436126,1436224..1436273,1436357..>1436494)	Acanthamoeba castellanii str. Neff	14924691
ACA1_073530	mRNA	ACA1_073530	NW_004457654.1	1437734	1439069	R	ACA1_073530	complement(join(<1437734..1437975,1438046..1438130,1438195..1438290,1438360..1438473,1438575..1438751,1438821..>1439069))	Acanthamoeba castellanii str. Neff	14924692
ACA1_073540	mRNA	ACA1_073540	NW_004457654.1	1440531	1441467	D	ACA1_073540	join(<1440531..1440740,1440758..1440940,1441163..1441309,1441417..>1441467)	Acanthamoeba castellanii str. Neff	14924693
ACA1_073550	mRNA	ACA1_073550	NW_004457654.1	1446856	1447314	D	ACA1_073550	join(<1446856..1446915,1446940..>1447314)	Acanthamoeba castellanii str. Neff	14924694
ACA1_073560	mRNA	ACA1_073560	NW_004457654.1	1447794	1448219	R	ACA1_073560	complement(join(<1447794..1447955,1448130..>1448219))	Acanthamoeba castellanii str. Neff	14924695
ACA1_073570	mRNA	ACA1_073570	NW_004457654.1	1451469	1452622	R	ACA1_073570	complement(join(<1451469..1451478,1451592..1451981,1452410..1452519,1452602..>1452622))	Acanthamoeba castellanii str. Neff	14924696
ACA1_073580	mRNA	ACA1_073580	NW_004457654.1	1453598	1454321	D	ACA1_073580	join(<1453598..1453640,1453832..1453905,1454094..1454163,1454266..>1454321)	Acanthamoeba castellanii str. Neff	14924697
ACA1_073600	mRNA	ACA1_073600	NW_004457654.1	1457229	1457694	R	ACA1_073600	complement(join(<1457229..1457296,1457325..>1457694))	Acanthamoeba castellanii str. Neff	14924699
ACA1_073610	mRNA	ACA1_073610	NW_004457654.1	1459124	1459711	D	ACA1_073610	join(<1459124..1459447,1459469..>1459711)	Acanthamoeba castellanii str. Neff	14924700
ACA1_073620	mRNA	ACA1_073620	NW_004457654.1	1460057	1461370	D	ACA1_073620	<1460057..>1461370	Acanthamoeba castellanii str. Neff	14924701
ACA1_073630	mRNA	ACA1_073630	NW_004457654.1	1461491	1462834	D	ACA1_073630	<1461491..>1462834	Acanthamoeba castellanii str. Neff	14924702
ACA1_073640	mRNA	ACA1_073640	NW_004457654.1	1463726	1464526	R	ACA1_073640	complement(<1463726..>1464526)	Acanthamoeba castellanii str. Neff	14924703
ACA1_073650	mRNA	ACA1_073650	NW_004457654.1	1465000	1466238	R	ACA1_073650	complement(join(<1465000..1465023,1465066..1465455,1465523..1465963,1466045..1466201,1466216..>1466238))	Acanthamoeba castellanii str. Neff	14924704
ACA1_073670	mRNA	ACA1_073670	NW_004457654.1	1469508	1470368	R	ACA1_073670	complement(join(<1469508..1469597,1469652..1469764,1469836..1469917,1470030..1470191,1470297..>1470368))	Acanthamoeba castellanii str. Neff	14924706
ACA1_073680	mRNA	ACA1_073680	NW_004457654.1	1471099	1472058	D	ACA1_073680	join(<1471099..1471576,1471913..>1472058)	Acanthamoeba castellanii str. Neff	14924707
ACA1_073690	mRNA	ACA1_073690	NW_004457654.1	1472960	1473723	R	ACA1_073690	complement(join(<1472960..1473220,1473337..1473582,1473652..>1473723))	Acanthamoeba castellanii str. Neff	14924708
ACA1_073710	mRNA	ACA1_073710	NW_004457654.1	1479740	1480902	R	ACA1_073710	complement(join(<1479740..1480275,1480355..1480465,1480528..1480616,1480700..>1480902))	Acanthamoeba castellanii str. Neff	14924710
ACA1_073720	mRNA	ACA1_073720	NW_004457654.1	1486221	1486679	D	ACA1_073720	join(<1486221..1486316,1486488..>1486679)	Acanthamoeba castellanii str. Neff	14924711
ACA1_073730	mRNA	ACA1_073730	NW_004457654.1	1489336	1489852	R	ACA1_073730	complement(join(<1489336..1489653,1489683..1489746,1489800..>1489852))	Acanthamoeba castellanii str. Neff	14924712
ACA1_012250	mRNA	ACA1_012250	NW_004457653.1	797	2006	R	ACA1_012250	complement(join(<797..948,1032..1371,1467..>2006))	Acanthamoeba castellanii str. Neff	14924159
ACA1_012260	mRNA	ACA1_012260	NW_004457653.1	2508	2998	D	ACA1_012260	join(<2508..2627,2699..2805,2884..>2998)	Acanthamoeba castellanii str. Neff	14924151
ACA1_012270	mRNA	ACA1_012270	NW_004457653.1	3662	6000	D	ACA1_012270	join(<3662..3770,3919..4001,4138..4234,4353..4432,4506..4706,4752..4915,5003..5096,5159..5322,5393..5463,5553..5593,5654..5804,5894..>6000)	Acanthamoeba castellanii str. Neff	14924152
ACA1_012280	mRNA	ACA1_012280	NW_004457653.1	6680	8945	D	ACA1_012280	join(<6680..6761,6845..6897,6979..7165,7294..7431,7511..7630,7662..7792,7897..8074,8135..8343,8417..8494,8584..8724,8820..>8945)	Acanthamoeba castellanii str. Neff	14924153
ACA1_012290	mRNA	ACA1_012290	NW_004457653.1	9092	9641	D	ACA1_012290	join(<9092..9239,9340..9399,9508..>9641)	Acanthamoeba castellanii str. Neff	14924154
ACA1_012300	mRNA	ACA1_012300	NW_004457653.1	9738	10745	R	ACA1_012300	complement(join(<9738..10157,10279..10372,10446..10522,10590..>10745))	Acanthamoeba castellanii str. Neff	14924155
ACA1_012310	mRNA	ACA1_012310	NW_004457653.1	11044	11875	D	ACA1_012310	join(<11044..11139,11208..11295,11374..11493,11578..11735,11810..>11875)	Acanthamoeba castellanii str. Neff	14924156
ACA1_012330	mRNA	ACA1_012330	NW_004457653.1	15371	19848	D	ACA1_012330	join(<15371..15837,15920..16098,16188..16392,16484..16634,16720..16931,17021..17281,17376..17455,17538..18556,18688..19290,19376..19447,19540..>19848)	Acanthamoeba castellanii str. Neff	14924158
ACA1_356910	mRNA	ACA1_356910	NW_004457652.1	61	385	D	ACA1_356910	join(<61..84,161..>385)	Acanthamoeba castellanii str. Neff	14924150
ACA1_356920	mRNA	ACA1_356920	NW_004457652.1	628	2870	D	ACA1_356920	join(<628..679,753..893,1202..1258,1377..1432,1546..1659,1757..1895,2033..2186,2264..2370,2540..2650,2722..>2870)	Acanthamoeba castellanii str. Neff	14924134
ACA1_356930	mRNA	ACA1_356930	NW_004457652.1	3669	6544	R	ACA1_356930	complement(join(<3669..3812,3979..4105,4184..4542,6089..>6544))	Acanthamoeba castellanii str. Neff	14924137
ACA1_357040	mRNA	ACA1_357040	NW_004457652.1	6698	7169	D	ACA1_357040	join(<6698..6959,7033..>7169)	Acanthamoeba castellanii str. Neff	14924138
ACA1_357050	mRNA	ACA1_357050	NW_004457652.1	7424	8390	R	ACA1_357050	complement(join(<7424..7888,8011..8154,8168..8239,8268..>8390))	Acanthamoeba castellanii str. Neff	14924139
ACA1_357160	mRNA	ACA1_357160	NW_004457652.1	8798	12390	R	ACA1_357160	complement(join(<8798..8924,9212..9259,9376..9458,9552..9679,9915..10002,10086..10216,10308..10478,10575..10643,10756..10874,11018..11126,11239..11367,11472..11535,11677..11827,11944..11990,12058..12227,12345..>12390))	Acanthamoeba castellanii str. Neff	14924140
ACA1_357470	mRNA	ACA1_357470	NW_004457652.1	13256	14073	D	ACA1_357470	join(<13256..13484,13743..13793,13934..>14073)	Acanthamoeba castellanii str. Neff	14924141
ACA1_357480	mRNA	ACA1_357480	NW_004457652.1	14314	16472	D	ACA1_357480	join(<14314..14723,14811..15168,15278..15317,15430..15627,15764..15853,15931..16056,16141..16271,16338..>16472)	Acanthamoeba castellanii str. Neff	14924142
ACA1_357490	mRNA	ACA1_357490	NW_004457652.1	16476	17339	R	ACA1_357490	complement(join(<16476..16691,16818..16952,17061..17125,17213..>17339))	Acanthamoeba castellanii str. Neff	14924143
ACA1_357500	mRNA	ACA1_357500	NW_004457652.1	17669	18867	D	ACA1_357500	join(<17669..17952,18081..18530,18738..>18867)	Acanthamoeba castellanii str. Neff	14924144
ACA1_357610	mRNA	ACA1_357610	NW_004457652.1	20247	23295	R	ACA1_357610	complement(join(<20247..20447,20605..20776,20916..21137,21221..21323,21711..21832,21933..21979,22091..22229,22394..22500,22577..22944,23196..>23295))	Acanthamoeba castellanii str. Neff	14924145
ACA1_357720	mRNA	ACA1_357720	NW_004457652.1	23174	23530	D	ACA1_357720	<23174..>23530	Acanthamoeba castellanii str. Neff	14924147
ACA1_357730	mRNA	ACA1_357730	NW_004457652.1	23680	23943	R	ACA1_357730	complement(<23680..>23943)	Acanthamoeba castellanii str. Neff	14924146
ACA1_357840	mRNA	ACA1_357840	NW_004457652.1	25300	26019	R	ACA1_357840	complement(join(<25300..25317,25439..25534,25660..25737,25879..>26019))	Acanthamoeba castellanii str. Neff	14924148
ACA1_357950	mRNA	ACA1_357950	NW_004457652.1	27751	29286	D	ACA1_357950	join(<27751..27880,27928..28019,28082..28191,28288..28477,28545..28626,28706..28857,28977..28995,29079..29167,29239..>29286)	Acanthamoeba castellanii str. Neff	14924149
ACA1_357960	mRNA	ACA1_357960	NW_004457652.1	29607	31230	D	ACA1_357960	join(<29607..30001,30115..30252,30345..30525,30627..30766,30869..31010,31102..>31230)	Acanthamoeba castellanii str. Neff	14924135
ACA1_358070	mRNA	ACA1_358070	NW_004457652.1	35531	36172	R	ACA1_358070	complement(join(<35531..35635,35729..35828,35892..>36172))	Acanthamoeba castellanii str. Neff	14924136
ACA1_342020	mRNA	ACA1_342020	NW_004457651.1	196	1657	R	ACA1_342020	complement(join(<196..1103,1477..>1657))	Acanthamoeba castellanii str. Neff	14924133
ACA1_342030	mRNA	ACA1_342030	NW_004457651.1	2296	3002	D	ACA1_342030	join(<2296..2392,2403..2492,2530..>3002)	Acanthamoeba castellanii str. Neff	14924112
ACA1_342040	mRNA	ACA1_342040	NW_004457651.1	3099	3907	R	ACA1_342040	complement(join(<3099..3247,3425..3555,3656..3782,3886..>3907))	Acanthamoeba castellanii str. Neff	14924113
ACA1_342050	mRNA	ACA1_342050	NW_004457651.1	3989	5019	R	ACA1_342050	complement(join(<3989..4413,4434..>5019))	Acanthamoeba castellanii str. Neff	14924114
ACA1_342160	mRNA	ACA1_342160	NW_004457651.1	8467	9250	D	ACA1_342160	join(<8467..8551,8686..8727,9195..>9250)	Acanthamoeba castellanii str. Neff	14924115
ACA1_342170	mRNA	ACA1_342170	NW_004457651.1	10145	10612	D	ACA1_342170	join(<10145..10326,10363..>10612)	Acanthamoeba castellanii str. Neff	14924116
ACA1_342180	mRNA	ACA1_342180	NW_004457651.1	10785	11696	D	ACA1_342180	join(<10785..10823,10843..11168,11310..11394,11439..>11696)	Acanthamoeba castellanii str. Neff	14924117
ACA1_342290	mRNA	ACA1_342290	NW_004457651.1	13083	14596	D	ACA1_342290	join(<13083..13322,13392..13486,13512..13782,13879..14041,14124..>14596)	Acanthamoeba castellanii str. Neff	14924118
ACA1_342400	mRNA	ACA1_342400	NW_004457651.1	16275	18702	D	ACA1_342400	join(<16275..16373,16389..16611,16719..16883,16974..17079,17184..17341,17417..17539,17636..17643,17790..17855,17937..18053,18275..18495,18585..>18702)	Acanthamoeba castellanii str. Neff	14924119
ACA1_342510	mRNA	ACA1_342510	NW_004457651.1	24031	26013	R	ACA1_342510	complement(join(<24031..24036,24099..24203,24280..24360,24438..24583,24660..24833,24869..24899,24972..25060,25149..25347,25418..25563,25644..25719,25807..25911,25981..>26013))	Acanthamoeba castellanii str. Neff	14924120
ACA1_342520	mRNA	ACA1_342520	NW_004457651.1	26171	26895	R	ACA1_342520	complement(join(<26171..26314,26409..26499,26570..26715,26866..>26895))	Acanthamoeba castellanii str. Neff	14924121
ACA1_342530	mRNA	ACA1_342530	NW_004457651.1	27887	28512	D	ACA1_342530	join(<27887..27971,28210..28263,28355..>28512)	Acanthamoeba castellanii str. Neff	14924122
ACA1_342840	mRNA	ACA1_342840	NW_004457651.1	35840	36052	D	ACA1_342840	<35840..>36052	Acanthamoeba castellanii str. Neff	14924123
ACA1_342850	mRNA	ACA1_342850	NW_004457651.1	37282	39018	R	ACA1_342850	complement(join(<37282..38152,38241..38667,38723..38842,38976..>39018))	Acanthamoeba castellanii str. Neff	14924124
ACA1_342860	mRNA	ACA1_342860	NW_004457651.1	39461	41440	D	ACA1_342860	join(<39461..39797,39852..40240,40345..40673,40714..>41440)	Acanthamoeba castellanii str. Neff	14924125
ACA1_342870	mRNA	ACA1_342870	NW_004457651.1	41803	44059	R	ACA1_342870	complement(join(<41803..42360,42498..42889,42981..43068,43281..43331,43470..43627,43708..>44059))	Acanthamoeba castellanii str. Neff	14924126
ACA1_342880	mRNA	ACA1_342880	NW_004457651.1	45650	46395	R	ACA1_342880	complement(join(<45650..45748,45967..>46395))	Acanthamoeba castellanii str. Neff	14924127
ACA1_342890	mRNA	ACA1_342890	NW_004457651.1	46667	47233	R	ACA1_342890	complement(join(<46667..46704,46835..46958,46989..47056,47155..>47233))	Acanthamoeba castellanii str. Neff	14924128
ACA1_342900	mRNA	ACA1_342900	NW_004457651.1	47263	47771	R	ACA1_342900	complement(join(<47263..47376,47631..>47771))	Acanthamoeba castellanii str. Neff	14924129
ACA1_342910	mRNA	ACA1_342910	NW_004457651.1	48768	49640	R	ACA1_342910	complement(join(<48768..49022,49034..49116,49225..49378,49602..>49640))	Acanthamoeba castellanii str. Neff	14924130
ACA1_342920	mRNA	ACA1_342920	NW_004457651.1	50047	55032	R	ACA1_342920	complement(join(<50047..50396,50488..51355,51505..52062,52152..52219,52303..52369,52445..52603,52700..54822,54969..>55032))	Acanthamoeba castellanii str. Neff	14924131
ACA1_342930	mRNA	ACA1_342930	NW_004457651.1	55388	57482	D	ACA1_342930	join(<55388..55420,55672..55795,56379..56583,56662..56719,57014..57153,57443..>57482)	Acanthamoeba castellanii str. Neff	14924132
ACA1_249760	mRNA	ACA1_249760	NW_004457650.1	5657	6636	D	ACA1_249760	join(<5657..5738,5845..6002,6172..>6636)	Acanthamoeba castellanii str. Neff	14924111
ACA1_249770	mRNA	ACA1_249770	NW_004457650.1	8727	12152	R	ACA1_249770	complement(join(<8727..9133,9208..9325,9439..9578,11034..11123,11236..11635,11815..12027,12120..>12152))	Acanthamoeba castellanii str. Neff	14924096
ACA1_249880	mRNA	ACA1_249880	NW_004457650.1	12434	14015	D	ACA1_249880	join(<12434..13145,13239..13396,13481..13572,13671..13837,13912..>14015)	Acanthamoeba castellanii str. Neff	14924097
ACA1_249890	mRNA	ACA1_249890	NW_004457650.1	14113	16302	R	ACA1_249890	complement(join(<14113..14207,14306..14419,14500..14576,14683..14774,14859..14947,15024..15102,15369..15476,15517..15721,15792..15929,16000..16109,16237..>16302))	Acanthamoeba castellanii str. Neff	14924098
ACA1_249900	mRNA	ACA1_249900	NW_004457650.1	18737	20772	R	ACA1_249900	complement(join(<18737..18964,19127..19259,19347..19402,19464..19541,19590..19679,19752..19837,20259..20320,20408..>20772))	Acanthamoeba castellanii str. Neff	14924099
ACA1_249910	mRNA	ACA1_249910	NW_004457650.1	21761	24912	R	ACA1_249910	complement(join(<21761..21782,21809..21933,22047..22154,22237..22481,22572..22712,22764..22886,22984..23094,23172..23280,23704..23789,23883..23990,24080..24152,24481..24544,24626..24747,24802..>24912))	Acanthamoeba castellanii str. Neff	14924100
ACA1_250020	mRNA	ACA1_250020	NW_004457650.1	25822	26391	R	ACA1_250020	complement(<25822..>26391)	Acanthamoeba castellanii str. Neff	14924101
ACA1_250030	mRNA	ACA1_250030	NW_004457650.1	26468	28038	R	ACA1_250030	complement(join(<26468..26491,26515..26625,26711..26831,26923..26975,27099..27167,27234..27299,27397..>28038))	Acanthamoeba castellanii str. Neff	14924102
ACA1_250040	mRNA	ACA1_250040	NW_004457650.1	28273	30028	R	ACA1_250040	complement(join(<28273..28394,28504..28618,28705..28802,28890..28987,29080..29248,29334..29436,29501..29628,29790..29957,29971..>30028))	Acanthamoeba castellanii str. Neff	14924103
ACA1_250050	mRNA	ACA1_250050	NW_004457650.1	30400	31521	R	ACA1_250050	complement(join(<30400..30667,30775..30850,30927..31009,31097..31226,31319..31358,31419..31499,31513..>31521))	Acanthamoeba castellanii str. Neff	14924104
ACA1_250160	mRNA	ACA1_250160	NW_004457650.1	33048	33383	D	ACA1_250160	<33048..>33383	Acanthamoeba castellanii str. Neff	14924105
ACA1_250170	mRNA	ACA1_250170	NW_004457650.1	33477	33732	R	ACA1_250170	complement(join(<33477..33613,33636..>33732))	Acanthamoeba castellanii str. Neff	14924106
ACA1_250180	mRNA	ACA1_250180	NW_004457650.1	34162	36780	R	ACA1_250180	complement(join(<34162..34450,34539..34616,34693..34780,34902..35077,35155..35339,35424..35588,35687..35782,35886..35993,36108..36206,36321..36436,36576..>36780))	Acanthamoeba castellanii str. Neff	14924107
ACA1_250290	mRNA	ACA1_250290	NW_004457650.1	41285	43179	R	ACA1_250290	complement(join(<41285..41442,41603..41952,42046..42282,42299..>43179))	Acanthamoeba castellanii str. Neff	14924108
ACA1_250300	mRNA	ACA1_250300	NW_004457650.1	43725	45519	D	ACA1_250300	join(<43725..43806,43881..43942,44027..44136,44210..44272,44361..44454,44551..44689,44867..44936,45033..45184,45262..45319,45489..>45519)	Acanthamoeba castellanii str. Neff	14924109
ACA1_250310	mRNA	ACA1_250310	NW_004457650.1	45910	48429	R	ACA1_250310	complement(join(<45910..46317,46383..46588,46673..47140,47205..48160,48227..>48429))	Acanthamoeba castellanii str. Neff	14924110
ACA1_043770	mRNA	ACA1_043770	NW_004457649.1	118	1686	R	ACA1_043770	complement(join(<118..294,439..566,652..699,780..794,954..>1686))	Acanthamoeba castellanii str. Neff	14924095
ACA1_043880	mRNA	ACA1_043880	NW_004457649.1	6669	8247	D	ACA1_043880	join(<6669..6753,6824..6849,6992..7082,7180..7712,7819..7852,7937..>8247)	Acanthamoeba castellanii str. Neff	14924090
ACA1_043890	mRNA	ACA1_043890	NW_004457649.1	8525	9139	D	ACA1_043890	join(<8525..8567,8666..9077,9106..>9139)	Acanthamoeba castellanii str. Neff	14924086
ACA1_044000	mRNA	ACA1_044000	NW_004457649.1	14149	14989	D	ACA1_044000	join(<14149..14185,14320..14738,14948..>14989)	Acanthamoeba castellanii str. Neff	14924087
ACA1_044110	mRNA	ACA1_044110	NW_004457649.1	16744	17229	D	ACA1_044110	join(<16744..17045,17064..>17229)	Acanthamoeba castellanii str. Neff	14924088
ACA1_044120	mRNA	ACA1_044120	NW_004457649.1	18527	19155	R	ACA1_044120	complement(join(<18527..18634,18789..18948,19085..>19155))	Acanthamoeba castellanii str. Neff	14924089
ACA1_044130	mRNA	ACA1_044130	NW_004457649.1	19454	20673	D	ACA1_044130	join(<19454..19648,19745..19957,20358..20548,20577..>20673)	Acanthamoeba castellanii str. Neff	14924091
ACA1_044240	mRNA	ACA1_044240	NW_004457649.1	20988	21314	R	ACA1_044240	complement(join(<20988..21155,21189..>21314))	Acanthamoeba castellanii str. Neff	14924092
ACA1_044250	mRNA	ACA1_044250	NW_004457649.1	21603	21818	D	ACA1_044250	<21603..>21818	Acanthamoeba castellanii str. Neff	14924093
ACA1_044260	mRNA	ACA1_044260	NW_004457649.1	22956	23177	R	ACA1_044260	complement(<22956..>23177)	Acanthamoeba castellanii str. Neff	14924094
ACA1_010930	mRNA	ACA1_010930	NW_004457648.1	2346	4026	R	ACA1_010930	complement(join(<2346..2378,2485..2683,2771..2868,3013..3095,3232..3354,3447..>4026))	Acanthamoeba castellanii str. Neff	14924085
ACA1_010940	mRNA	ACA1_010940	NW_004457648.1	7635	10313	R	ACA1_010940	complement(join(<7635..7840,7948..8107,8261..8374,8529..8647,8707..8797,8867..8956,9042..9130,9218..9267,9456..9529,9677..9854,9949..>10313))	Acanthamoeba castellanii str. Neff	14924084
ACA1_008610	mRNA	ACA1_008610	NW_004457647.1	5189	7161	D	ACA1_008610	join(<5189..5198,5237..5341,5459..5521,5638..6113,6187..6305,6392..6506,6837..6896,6979..>7161)	Acanthamoeba castellanii str. Neff	14924082
ACA1_008620	mRNA	ACA1_008620	NW_004457647.1	7886	8748	D	ACA1_008620	join(<7886..7993,8320..8704,8738..>8748)	Acanthamoeba castellanii str. Neff	14924083
ACA1_008730	mRNA	ACA1_008730	NW_004457647.1	12359	12934	D	ACA1_008730	join(<12359..12437,12521..12787,12861..>12934)	Acanthamoeba castellanii str. Neff	14924080
ACA1_008740	mRNA	ACA1_008740	NW_004457647.1	13010	13423	R	ACA1_008740	complement(join(<13010..13121,13215..>13423))	Acanthamoeba castellanii str. Neff	14924081
ACA1_083200	mRNA	ACA1_083200	NW_004457646.1	388	1569	R	ACA1_083200	complement(join(<388..911,993..1158,1216..>1569))	Acanthamoeba castellanii str. Neff	14924079
ACA1_083310	mRNA	ACA1_083310	NW_004457646.1	4386	7072	D	ACA1_083310	join(<4386..4460,4781..4882,5189..5371,5450..5735,5797..5924,6072..6204,6503..6658,6852..6950,7017..>7072)	Acanthamoeba castellanii str. Neff	14924076
ACA1_083320	mRNA	ACA1_083320	NW_004457646.1	9167	9556	D	ACA1_083320	join(<9167..9193,9365..>9556)	Acanthamoeba castellanii str. Neff	14924077
ACA1_083430	mRNA	ACA1_083430	NW_004457646.1	12923	14140	R	ACA1_083430	complement(join(<12923..13188,13340..13497,13762..13838,13898..13941,14069..>14140))	Acanthamoeba castellanii str. Neff	14924078
ACA1_306440	mRNA	ACA1_306440	NW_004457645.1	1359	2536	R	ACA1_306440	complement(join(<1359..1540,1712..1739,2154..2260,2437..>2536))	Acanthamoeba castellanii str. Neff	14924072
ACA1_306550	mRNA	ACA1_306550	NW_004457645.1	9927	11796	D	ACA1_306550	join(<9927..9935,10006..10062,10386..10483,10584..10650,10757..10811,10948..11103,11226..11364,11706..>11796)	Acanthamoeba castellanii str. Neff	14924074
ACA1_306560	mRNA	ACA1_306560	NW_004457645.1	15241	15549	R	ACA1_306560	complement(<15241..>15549)	Acanthamoeba castellanii str. Neff	14924073
ACA1_306570	mRNA	ACA1_306570	NW_004457645.1	17000	17539	D	ACA1_306570	<17000..>17539	Acanthamoeba castellanii str. Neff	14924075
ACA1_359690	mRNA	ACA1_359690	NW_004457643.1	76	5040	R	ACA1_359690	complement(join(<76..184,405..444,715..826,953..1075,1257..1372,1488..1607,1754..2093,2313..2460,2586..2664,2972..3506,3638..3799,3916..3965,4159..4270,4438..4544,4721..4827,4901..>5040))	Acanthamoeba castellanii str. Neff	14924071
ACA1_359700	mRNA	ACA1_359700	NW_004457643.1	5180	5757	R	ACA1_359700	complement(join(<5180..5468,5540..>5757))	Acanthamoeba castellanii str. Neff	14923944
ACA1_359710	mRNA	ACA1_359710	NW_004457643.1	6024	8909	R	ACA1_359710	complement(join(<6024..6248,6354..6566,6717..6806,6907..7165,7243..7479,7618..7735,7902..8015,8142..8336,8408..8544,8610..8691,8768..>8909))	Acanthamoeba castellanii str. Neff	14923945
ACA1_359720	mRNA	ACA1_359720	NW_004457643.1	9685	10059	D	ACA1_359720	join(<9685..9774,9830..9901,9997..>10059)	Acanthamoeba castellanii str. Neff	14923946
ACA1_359730	mRNA	ACA1_359730	NW_004457643.1	10593	14375	D	ACA1_359730	join(<10593..11027,11204..11269,11437..11556,11575..11665,11838..12016,12097..12219,12355..12425,12553..12716,12820..13364,13467..13931,14030..14094,14234..>14375)	Acanthamoeba castellanii str. Neff	14923947
ACA1_359740	mRNA	ACA1_359740	NW_004457643.1	14762	15715	R	ACA1_359740	complement(join(<14762..14842,14925..15055,15163..15256,15359..>15715))	Acanthamoeba castellanii str. Neff	14923948
ACA1_359750	mRNA	ACA1_359750	NW_004457643.1	15792	17237	R	ACA1_359750	complement(join(<15792..15949,16178..16282,16388..16687,16850..16991,17106..>17237))	Acanthamoeba castellanii str. Neff	14923949
ACA1_359760	mRNA	ACA1_359760	NW_004457643.1	18059	19514	D	ACA1_359760	join(<18059..18085,18152..18452,18559..>19514)	Acanthamoeba castellanii str. Neff	14923950
ACA1_359770	mRNA	ACA1_359770	NW_004457643.1	19761	20084	D	ACA1_359770	<19761..>20084	Acanthamoeba castellanii str. Neff	14923951
ACA1_359780	mRNA	ACA1_359780	NW_004457643.1	20185	20462	D	ACA1_359780	join(<20185..20259,20271..>20462)	Acanthamoeba castellanii str. Neff	14923952
ACA1_359890	mRNA	ACA1_359890	NW_004457643.1	25031	25588	R	ACA1_359890	complement(<25031..>25588)	Acanthamoeba castellanii str. Neff	14923953
ACA1_360000	mRNA	ACA1_360000	NW_004457643.1	30320	32627	D	ACA1_360000	join(<30320..30372,30470..30795,30888..31049,31130..32011,32101..32412,32494..>32627)	Acanthamoeba castellanii str. Neff	14923954
ACA1_360010	mRNA	ACA1_360010	NW_004457643.1	32856	33388	D	ACA1_360010	join(<32856..32902,32966..33071,33134..33220,33305..>33388)	Acanthamoeba castellanii str. Neff	14923955
ACA1_360020	mRNA	ACA1_360020	NW_004457643.1	33339	35781	R	ACA1_360020	complement(join(<33339..33629,33755..33840,33927..34006,34083..34227,34323..34474,34549..34687,34767..34875,34993..35106,35196..35281,35352..35468,35541..35594,35721..>35781))	Acanthamoeba castellanii str. Neff	14923956
ACA1_360030	mRNA	ACA1_360030	NW_004457643.1	35909	36170	R	ACA1_360030	complement(join(<35909..36067,36084..>36170))	Acanthamoeba castellanii str. Neff	14923957
ACA1_360040	mRNA	ACA1_360040	NW_004457643.1	36309	37851	R	ACA1_360040	complement(join(<36309..36428,36515..36640,36732..36841,36976..37109,37250..37348,37477..37596,37679..37746,37849..>37851))	Acanthamoeba castellanii str. Neff	14923958
ACA1_360050	mRNA	ACA1_360050	NW_004457643.1	38084	39432	D	ACA1_360050	join(<38084..38127,38442..38638,38789..>39432)	Acanthamoeba castellanii str. Neff	14923959
ACA1_360060	mRNA	ACA1_360060	NW_004457643.1	39575	40503	R	ACA1_360060	complement(join(<39575..39717,39788..39900,39980..40068,40139..40272,40347..>40503))	Acanthamoeba castellanii str. Neff	14923960
ACA1_360070	mRNA	ACA1_360070	NW_004457643.1	40772	43332	R	ACA1_360070	complement(join(<40772..41146,41225..41367,41433..41510,41585..41743,41828..41910,41998..42143,42217..42368,42446..42571,42792..>43332))	Acanthamoeba castellanii str. Neff	14923961
ACA1_360080	mRNA	ACA1_360080	NW_004457643.1	43694	48150	D	ACA1_360080	join(<43694..43799,43895..44005,44121..44237,44327..44632,44707..44828,44916..45896,46020..46102,46233..46281,46375..46500,46577..46700,46803..46943,47040..47155,47264..47544,47656..47738,47873..>48150)	Acanthamoeba castellanii str. Neff	14923962
ACA1_360090	mRNA	ACA1_360090	NW_004457643.1	48214	48740	R	ACA1_360090	complement(join(<48214..48315,48403..48555,48654..>48740))	Acanthamoeba castellanii str. Neff	14923963
ACA1_360100	mRNA	ACA1_360100	NW_004457643.1	48810	50193	D	ACA1_360100	join(<48810..48894,49003..49229,49326..49539,49608..49709,49790..>50193)	Acanthamoeba castellanii str. Neff	14923964
ACA1_360110	mRNA	ACA1_360110	NW_004457643.1	50282	51498	R	ACA1_360110	complement(join(<50282..50645,50767..50869,50955..51062,51135..51265,51335..>51498))	Acanthamoeba castellanii str. Neff	14923965
ACA1_360120	mRNA	ACA1_360120	NW_004457643.1	51538	51831	R	ACA1_360120	complement(<51538..>51831)	Acanthamoeba castellanii str. Neff	14923966
ACA1_360130	mRNA	ACA1_360130	NW_004457643.1	52083	55364	R	ACA1_360130	complement(join(<52083..52263,52342..53026,53114..53209,53295..53368,53454..53543,53658..53773,53869..54079,54178..54345,54428..54527,54599..54722,54777..>55364))	Acanthamoeba castellanii str. Neff	14923967
ACA1_360140	mRNA	ACA1_360140	NW_004457643.1	55837	59499	D	ACA1_360140	join(<55837..56390,56479..56573,56649..56796,56817..56995,57186..57321,57402..57538,57622..57695,57772..57962,58023..58332,58417..58545,58619..58774,58833..58990,59069..59209,59295..>59499)	Acanthamoeba castellanii str. Neff	14923968
ACA1_360150	mRNA	ACA1_360150	NW_004457643.1	59654	62109	D	ACA1_360150	join(<59654..59890,59990..60125,60194..60242,60340..60476,60558..60755,60861..60984,61053..61227,61334..61432,61528..61623,61708..>62109)	Acanthamoeba castellanii str. Neff	14923969
ACA1_360160	mRNA	ACA1_360160	NW_004457643.1	62197	62856	R	ACA1_360160	complement(join(<62197..62363,62439..>62856))	Acanthamoeba castellanii str. Neff	14923970
ACA1_360170	mRNA	ACA1_360170	NW_004457643.1	62974	64043	R	ACA1_360170	complement(join(<62974..63247,63571..63663,63747..63867,63947..>64043))	Acanthamoeba castellanii str. Neff	14923971
ACA1_360180	mRNA	ACA1_360180	NW_004457643.1	64857	65653	R	ACA1_360180	complement(join(<64857..65162,65240..65345,65445..>65653))	Acanthamoeba castellanii str. Neff	14923972
ACA1_360190	mRNA	ACA1_360190	NW_004457643.1	65953	68407	D	ACA1_360190	join(<65953..65977,66078..66169,66314..66353,66422..66553,66651..66766,66862..66924,67027..67119,67192..67320,67406..67540,67608..67676,67756..67813,67903..68033,68103..68192,68267..>68407)	Acanthamoeba castellanii str. Neff	14923973
ACA1_360200	mRNA	ACA1_360200	NW_004457643.1	68675	69142	D	ACA1_360200	join(<68675..68761,68840..>69142)	Acanthamoeba castellanii str. Neff	14923974
ACA1_360210	mRNA	ACA1_360210	NW_004457643.1	69255	70657	D	ACA1_360210	join(<69255..69456,69543..>70657)	Acanthamoeba castellanii str. Neff	14923975
ACA1_360220	mRNA	ACA1_360220	NW_004457643.1	70842	71413	D	ACA1_360220	join(<70842..70950,71022..71091,71170..>71413)	Acanthamoeba castellanii str. Neff	14923976
ACA1_360230	mRNA	ACA1_360230	NW_004457643.1	71521	71859	R	ACA1_360230	complement(<71521..>71859)	Acanthamoeba castellanii str. Neff	14923977
ACA1_360240	mRNA	ACA1_360240	NW_004457643.1	72417	74837	D	ACA1_360240	join(<72417..72639,72693..72772,72869..73009,73083..73143,73221..73314,73408..73478,73581..73669,73749..73823,73902..73954,74028..74059,74167..74286,74371..74491,74588..>74837)	Acanthamoeba castellanii str. Neff	14923978
ACA1_360250	mRNA	ACA1_360250	NW_004457643.1	75357	77571	R	ACA1_360250	complement(join(<75357..75629,75723..75878,76005..76091,76199..76298,76372..76466,76585..76866,77039..77099,77170..77253,77345..>77571))	Acanthamoeba castellanii str. Neff	14923979
ACA1_360260	mRNA	ACA1_360260	NW_004457643.1	77765	79297	D	ACA1_360260	join(<77765..77884,78052..78266,78345..78490,78576..78684,78753..78809,78900..78938,79004..79061,79145..>79297)	Acanthamoeba castellanii str. Neff	14923980
ACA1_360270	mRNA	ACA1_360270	NW_004457643.1	79684	81311	D	ACA1_360270	join(<79684..79779,80051..80188,80289..80362,80455..80565,80633..80849,80960..81054,81140..>81311)	Acanthamoeba castellanii str. Neff	14923981
ACA1_360280	mRNA	ACA1_360280	NW_004457643.1	82012	83043	D	ACA1_360280	<82012..>83043	Acanthamoeba castellanii str. Neff	14923982
ACA1_360290	mRNA	ACA1_360290	NW_004457643.1	83336	84199	D	ACA1_360290	join(<83336..83356,83420..83456,83535..83775,83992..>84199)	Acanthamoeba castellanii str. Neff	14923983
ACA1_360300	mRNA	ACA1_360300	NW_004457643.1	84322	85671	D	ACA1_360300	join(<84322..84475,84593..84671,84765..84876,84982..85191,85268..85417,85552..>85671)	Acanthamoeba castellanii str. Neff	14923984
ACA1_360310	mRNA	ACA1_360310	NW_004457643.1	85709	87328	R	ACA1_360310	complement(join(<85709..85934,86008..86591,86693..>87328))	Acanthamoeba castellanii str. Neff	14923985
ACA1_360320	mRNA	ACA1_360320	NW_004457643.1	87470	88216	D	ACA1_360320	join(<87470..87878,87912..>88216)	Acanthamoeba castellanii str. Neff	14923986
ACA1_360330	mRNA	ACA1_360330	NW_004457643.1	88463	91811	R	ACA1_360330	complement(join(<88463..88796,88894..89006,89108..89503,89590..89711,89796..89918,89929..89952,90093..90214,90297..90496,90621..90713,90793..90962,91080..91236,91282..91620,91649..91665,91745..>91811))	Acanthamoeba castellanii str. Neff	14923987
ACA1_360340	mRNA	ACA1_360340	NW_004457643.1	92080	100092	D	ACA1_360340	join(<92080..92191,92259..92740,92831..93210,93279..93417,93491..93704,93801..93980,94069..94179,94283..94417,94489..94583,94674..94782,94856..94974,95110..95231,95345..95702,95772..96077,96253..96503,96657..96897,96989..97429,97508..97617,97696..97929,97999..98417,98493..98828,98929..99107,99215..99494,99588..99897,99990..>100092)	Acanthamoeba castellanii str. Neff	14923988
ACA1_360350	mRNA	ACA1_360350	NW_004457643.1	100261	102804	R	ACA1_360350	complement(join(<100261..100330,100422..100561,100637..100720,100800..100865,100945..101319,101399..101558,101635..101754,101857..101933,102011..102092,102203..>102804))	Acanthamoeba castellanii str. Neff	14923989
ACA1_360360	mRNA	ACA1_360360	NW_004457643.1	103162	104881	D	ACA1_360360	join(<103162..103588,103664..103791,103881..103963,104031..104134,104210..104299,104386..104501,104582..>104881)	Acanthamoeba castellanii str. Neff	14923990
ACA1_360380	mRNA	ACA1_360380	NW_004457643.1	107763	111543	D	ACA1_360380	join(<107763..108879,108976..109130,109190..109321,109411..109433,109497..109607,109672..109740,109820..110049,110143..110226,110303..110350,110365..110446,110527..110591,110683..110833,110976..>111543)	Acanthamoeba castellanii str. Neff	14923992
ACA1_360390	mRNA	ACA1_360390	NW_004457643.1	111748	113520	R	ACA1_360390	complement(<111748..>113520)	Acanthamoeba castellanii str. Neff	14923993
ACA1_360400	mRNA	ACA1_360400	NW_004457643.1	113829	119434	D	ACA1_360400	join(<113829..113858,114017..114381,114470..114803,114866..114990,115064..115287,115360..115541,115614..116009,116089..116199,116281..116438,116522..116624,116698..116863,116933..117158,117270..117543,117605..117779,117873..117981,118045..118251,118318..118422,118490..118562,118645..118756,118831..118889,118988..119116,119246..>119434)	Acanthamoeba castellanii str. Neff	14923994
ACA1_360410	mRNA	ACA1_360410	NW_004457643.1	120086	126711	D	ACA1_360410	join(<120086..120313,120406..120474,120560..121111,121186..121361,121451..121541,121633..121733,121820..121980,122055..122221,122307..122717,122843..122969,123050..123168,123279..123367,123443..123495,123581..123688,123771..123935,124051..124127,124214..124300,124358..124466,124668..124837,124880..125140,125237..125377,125591..125704,125765..125858,125947..125987,126080..126188,126256..126313,126483..>126711)	Acanthamoeba castellanii str. Neff	14923995
ACA1_360420	mRNA	ACA1_360420	NW_004457643.1	126858	127594	D	ACA1_360420	join(<126858..127446,127581..>127594)	Acanthamoeba castellanii str. Neff	14923996
ACA1_360430	mRNA	ACA1_360430	NW_004457643.1	128046	130783	D	ACA1_360430	join(<128046..128111,128172..128275,128341..128751,128811..128922,128997..129221,129291..129504,129575..129672,129732..129845,129915..130083,130170..>130783)	Acanthamoeba castellanii str. Neff	14923997
ACA1_360440	mRNA	ACA1_360440	NW_004457643.1	131138	133094	D	ACA1_360440	join(<131138..131330,131393..131672,131771..132008,132081..132183,132270..132788,132904..>133094)	Acanthamoeba castellanii str. Neff	14923998
ACA1_360450	mRNA	ACA1_360450	NW_004457643.1	133290	135703	D	ACA1_360450	join(<133290..133413,133506..133979,134052..134118,134206..134244,134352..134606,134709..134926,135015..>135703)	Acanthamoeba castellanii str. Neff	14923999
ACA1_360460	mRNA	ACA1_360460	NW_004457643.1	137915	138145	R	ACA1_360460	complement(<137915..>138145)	Acanthamoeba castellanii str. Neff	14924000
ACA1_360470	mRNA	ACA1_360470	NW_004457643.1	140716	141349	D	ACA1_360470	join(<140716..140855,141163..>141349)	Acanthamoeba castellanii str. Neff	14924001
ACA1_360480	mRNA	ACA1_360480	NW_004457643.1	141432	141851	D	ACA1_360480	join(<141432..141794,141840..>141851)	Acanthamoeba castellanii str. Neff	14924002
ACA1_360490	mRNA	ACA1_360490	NW_004457643.1	143064	143201	D	ACA1_360490	<143064..>143201	Acanthamoeba castellanii str. Neff	14924003
ACA1_360500	mRNA	ACA1_360500	NW_004457643.1	143556	146820	R	ACA1_360500	complement(join(<143556..143666,143765..143818,143896..143995,144071..144250,144352..144482,144598..144658,144771..144851,144946..145108,145235..145301,145477..145661,145742..145850,145937..146052,146140..146232,146305..146358,146421..146600,146661..>146820))	Acanthamoeba castellanii str. Neff	14924004
ACA1_360510	mRNA	ACA1_360510	NW_004457643.1	147075	148196	D	ACA1_360510	join(<147075..147481,147542..147656,147722..147846,147912..147993,148161..>148196)	Acanthamoeba castellanii str. Neff	14924005
ACA1_360520	mRNA	ACA1_360520	NW_004457643.1	148360	149280	R	ACA1_360520	complement(join(<148360..148773,148908..148979,149200..>149280))	Acanthamoeba castellanii str. Neff	14924006
ACA1_360530	mRNA	ACA1_360530	NW_004457643.1	149570	151622	R	ACA1_360530	complement(join(<149570..149860,149951..150079,150162..150419,150537..150742,150822..151080,151215..151513,151571..>151622))	Acanthamoeba castellanii str. Neff	14924007
ACA1_360540	mRNA	ACA1_360540	NW_004457643.1	152225	156333	D	ACA1_360540	join(<152225..152368,152499..152729,152817..152910,153022..153347,153459..153813,153905..154026,154123..154802,154869..>156333)	Acanthamoeba castellanii str. Neff	14924008
ACA1_360550	mRNA	ACA1_360550	NW_004457643.1	156406	162421	R	ACA1_360550	complement(join(<156406..156495,156607..156957,157093..157242,157907..157972,158101..158289,158384..158488,158585..158757,158827..158875,158992..159138,159232..159335,159440..159515,159588..159719,159819..159974,160066..160199,160283..160398,160772..160938,161025..161150,161233..161345,161426..161528,161559..161709,161742..162162,162283..>162421))	Acanthamoeba castellanii str. Neff	14924009
ACA1_360560	mRNA	ACA1_360560	NW_004457643.1	162575	163906	R	ACA1_360560	complement(join(<162575..162862,162948..163186,163261..163372,163438..163654,163734..>163906))	Acanthamoeba castellanii str. Neff	14924010
ACA1_360570	mRNA	ACA1_360570	NW_004457643.1	164028	165436	D	ACA1_360570	join(<164028..164190,164271..164433,164499..164642,164704..165163,165247..165340,165408..>165436)	Acanthamoeba castellanii str. Neff	14924011
ACA1_360580	mRNA	ACA1_360580	NW_004457643.1	165526	166389	R	ACA1_360580	complement(join(<165526..165717,165773..165857,166062..166172,166235..166317,166378..>166389))	Acanthamoeba castellanii str. Neff	14924012
ACA1_360590	mRNA	ACA1_360590	NW_004457643.1	166894	167681	R	ACA1_360590	complement(join(<166894..167057,167149..167289,167354..>167681))	Acanthamoeba castellanii str. Neff	14924013
ACA1_360600	mRNA	ACA1_360600	NW_004457643.1	167909	169071	D	ACA1_360600	join(<167909..168014,168101..168196,168289..168353,168463..>169071)	Acanthamoeba castellanii str. Neff	14924014
ACA1_360610	mRNA	ACA1_360610	NW_004457643.1	169344	180897	D	ACA1_360610	join(<169344..169445,169590..169736,169833..169939,170037..170347,170491..170699,170878..171022,171088..171182,171273..171375,171467..171529,171601..171731,171819..171865,171933..172002,172075..172164,172258..173175,173253..173670,173759..173835,173948..174069,174149..174270,174366..174480,174598..174745,174833..175154,175271..175455,175544..175878,175961..176092,176223..176419,176505..176650,176719..176794,176873..176946,176959..177024,177105..177415,177538..177659,177753..177874,178005..178107,178218..178268,178346..178490,178598..179137,179150..180713,180802..>180897)	Acanthamoeba castellanii str. Neff	14924015
ACA1_360620	mRNA	ACA1_360620	NW_004457643.1	181083	182281	D	ACA1_360620	join(<181083..181488,181597..181620,181670..181778,181809..182035,182106..>182281)	Acanthamoeba castellanii str. Neff	14924016
ACA1_360630	mRNA	ACA1_360630	NW_004457643.1	182343	183813	D	ACA1_360630	join(<182343..182479,182573..182652,182744..182815,182901..183009,183090..>183813)	Acanthamoeba castellanii str. Neff	14924017
ACA1_360640	mRNA	ACA1_360640	NW_004457643.1	184915	185595	D	ACA1_360640	<184915..>185595	Acanthamoeba castellanii str. Neff	14924018
ACA1_360650	mRNA	ACA1_360650	NW_004457643.1	186191	186644	R	ACA1_360650	complement(join(<186191..186323,186397..186495,186580..>186644))	Acanthamoeba castellanii str. Neff	14924019
ACA1_360660	mRNA	ACA1_360660	NW_004457643.1	186673	187203	R	ACA1_360660	complement(join(<186673..186905,186928..187048,187141..>187203))	Acanthamoeba castellanii str. Neff	14924020
ACA1_360770	mRNA	ACA1_360770	NW_004457643.1	188762	189364	R	ACA1_360770	complement(join(<188762..188902,189017..189150,189259..>189364))	Acanthamoeba castellanii str. Neff	14924021
ACA1_360780	mRNA	ACA1_360780	NW_004457643.1	190053	190580	R	ACA1_360780	complement(join(<190053..190277,190395..>190580))	Acanthamoeba castellanii str. Neff	14924022
ACA1_360890	mRNA	ACA1_360890	NW_004457643.1	191160	194144	R	ACA1_360890	complement(join(<191160..191208,191288..191435,191530..191601,191675..191752,191830..191941,192067..192170,192243..192289,192358..192445,192539..192672,192733..192863,192952..193137,193264..193358,193435..193464,193563..193674,193746..>194144))	Acanthamoeba castellanii str. Neff	14924023
ACA1_360900	mRNA	ACA1_360900	NW_004457643.1	194333	196211	R	ACA1_360900	complement(join(<194333..194645,194752..195702,195731..195794,195812..>196211))	Acanthamoeba castellanii str. Neff	14924024
ACA1_360910	mRNA	ACA1_360910	NW_004457643.1	196515	197029	D	ACA1_360910	join(<196515..196705,196810..>197029)	Acanthamoeba castellanii str. Neff	14924025
ACA1_360920	mRNA	ACA1_360920	NW_004457643.1	197669	200762	D	ACA1_360920	join(<197669..198215,198287..198389,198485..198967,199074..199320,199413..199536,199618..199866,199989..200133,200292..200368,200460..200629,200721..>200762)	Acanthamoeba castellanii str. Neff	14924026
ACA1_360930	mRNA	ACA1_360930	NW_004457643.1	201193	202622	D	ACA1_360930	join(<201193..202308,202323..>202622)	Acanthamoeba castellanii str. Neff	14924027
ACA1_360940	mRNA	ACA1_360940	NW_004457643.1	202872	204839	R	ACA1_360940	complement(join(<202872..202919,202942..202999,203298..203396,203613..203751,203823..203949,204032..204118,204291..204388,204452..204527,204747..>204839))	Acanthamoeba castellanii str. Neff	14924028
ACA1_360950	mRNA	ACA1_360950	NW_004457643.1	205708	208294	R	ACA1_360950	complement(join(<205708..205891,205964..206067,206144..206240,206286..206401,206472..206560,206799..206976,207094..207279,207342..207462,207547..207679,207747..207887,207943..>208294))	Acanthamoeba castellanii str. Neff	14924029
ACA1_360960	mRNA	ACA1_360960	NW_004457643.1	208394	210743	R	ACA1_360960	complement(join(<208394..208498,208585..208722,208800..208878,208961..209038,209107..209177,209258..209316,209381..209438,209527..209594,209663..209757,209830..209949,210033..210111,210161..210262,210325..210418,210504..210616,210686..>210743))	Acanthamoeba castellanii str. Neff	14924030
ACA1_360970	mRNA	ACA1_360970	NW_004457643.1	210877	213213	R	ACA1_360970	complement(join(<210877..211190,211299..211564,211668..211771,211835..212259,212339..212471,212562..212752,212891..213089,213184..>213213))	Acanthamoeba castellanii str. Neff	14924031
ACA1_360980	mRNA	ACA1_360980	NW_004457643.1	214042	216145	D	ACA1_360980	join(<214042..214115,214204..214412,214484..214564,214646..214758,214844..215036,215126..215276,215385..215526,215660..>216145)	Acanthamoeba castellanii str. Neff	14924032
ACA1_360990	mRNA	ACA1_360990	NW_004457643.1	216206	218287	D	ACA1_360990	join(<216206..216490,216548..216676,216749..216911,217028..217199,217266..217353,217682..>218287)	Acanthamoeba castellanii str. Neff	14924033
ACA1_361000	mRNA	ACA1_361000	NW_004457643.1	218373	219688	R	ACA1_361000	complement(join(<218373..218812,218891..219016,219126..219329,219407..219448,219622..>219688))	Acanthamoeba castellanii str. Neff	14924034
ACA1_361010	mRNA	ACA1_361010	NW_004457643.1	220552	222787	D	ACA1_361010	join(<220552..220638,220788..220865,220971..221087,221182..221336,221431..221533,221652..222038,222120..222191,222297..222450,222514..222596,222668..>222787)	Acanthamoeba castellanii str. Neff	14924035
ACA1_361020	mRNA	ACA1_361020	NW_004457643.1	223053	223910	R	ACA1_361020	complement(join(<223053..223322,223406..223753,223884..>223910))	Acanthamoeba castellanii str. Neff	14924036
ACA1_361040	mRNA	ACA1_361040	NW_004457643.1	224816	226973	D	ACA1_361040	join(<224816..225031,225099..225199,225263..225359,225435..225507,225600..226135,226287..226373,226450..226600,226675..>226973)	Acanthamoeba castellanii str. Neff	14924038
ACA1_361050	mRNA	ACA1_361050	NW_004457643.1	227454	230714	D	ACA1_361050	join(<227454..227840,227980..228073,228216..228361,228548..228635,228874..228931,229042..229116,229248..229388,229507..229549,229646..229735,229808..229894,229995..230221,230405..>230714)	Acanthamoeba castellanii str. Neff	14924039
ACA1_361060	mRNA	ACA1_361060	NW_004457643.1	231112	232646	D	ACA1_361060	join(<231112..231458,231602..231858,231942..232033,232124..232262,232345..>232646)	Acanthamoeba castellanii str. Neff	14924040
ACA1_361070	mRNA	ACA1_361070	NW_004457643.1	232858	235306	R	ACA1_361070	complement(join(<232858..232982,233073..233199,233285..233421,233500..233678,233752..233842,233888..234070,234135..234228,234321..234412,234516..234638,234733..>235306))	Acanthamoeba castellanii str. Neff	14924041
ACA1_361080	mRNA	ACA1_361080	NW_004457643.1	236578	237380	D	ACA1_361080	join(<236578..236701,237002..237087,237156..237217,237284..>237380)	Acanthamoeba castellanii str. Neff	14924042
ACA1_361090	mRNA	ACA1_361090	NW_004457643.1	237564	240801	D	ACA1_361090	join(<237564..237753,237833..237897,237983..238010,238085..238170,238268..238363,238518..238575,238644..238717,238811..238957,239021..239335,239430..239577,239679..240379,240458..240619,240649..>240801)	Acanthamoeba castellanii str. Neff	14924043
ACA1_361100	mRNA	ACA1_361100	NW_004457643.1	241032	243259	R	ACA1_361100	complement(join(<241032..241195,241283..241386,241486..241585,241689..241835,241926..242045,242143..>243259))	Acanthamoeba castellanii str. Neff	14924044
ACA1_361110	mRNA	ACA1_361110	NW_004457643.1	243640	244173	R	ACA1_361110	complement(<243640..>244173)	Acanthamoeba castellanii str. Neff	14924045
ACA1_361120	mRNA	ACA1_361120	NW_004457643.1	244532	247618	D	ACA1_361120	join(<244532..245483,245630..245657,245737..245821,245971..246087,246194..246308,246418..246582,246696..246776,246868..246968,247055..247288,247375..247444,247542..>247618)	Acanthamoeba castellanii str. Neff	14924046
ACA1_361130	mRNA	ACA1_361130	NW_004457643.1	247739	249185	R	ACA1_361130	complement(join(<247739..247867,247927..248000,248103..248168,248259..248406,248492..248614,248730..248888,249024..>249185))	Acanthamoeba castellanii str. Neff	14924047
ACA1_361140	mRNA	ACA1_361140	NW_004457643.1	249562	250750	D	ACA1_361140	join(<249562..249606,249682..249787,249880..249978,250079..250152,250168..250219,250338..250477,250568..>250750)	Acanthamoeba castellanii str. Neff	14924048
ACA1_361150	mRNA	ACA1_361150	NW_004457643.1	250861	252669	R	ACA1_361150	complement(join(<250861..251041,251127..251664,251755..252232,252321..252516,252599..>252669))	Acanthamoeba castellanii str. Neff	14924049
ACA1_361160	mRNA	ACA1_361160	NW_004457643.1	252866	253549	D	ACA1_361160	<252866..>253549	Acanthamoeba castellanii str. Neff	14924050
ACA1_361170	mRNA	ACA1_361170	NW_004457643.1	253925	259082	R	ACA1_361170	complement(join(<253925..254144,254275..254337,254446..254806,254922..255075,255193..255578,255687..256806,256983..257426,257514..257587,257745..257909,258018..258183,258267..258510,258607..258736,258885..258937,259030..>259082))	Acanthamoeba castellanii str. Neff	14924051
ACA1_361180	mRNA	ACA1_361180	NW_004457643.1	259246	261164	R	ACA1_361180	complement(join(<259246..259277,259350..259449,259497..259568,259642..259730,259805..259945,260036..260126,260234..260353,260561..260700,260792..>261164))	Acanthamoeba castellanii str. Neff	14924052
ACA1_361190	mRNA	ACA1_361190	NW_004457643.1	261241	262751	R	ACA1_361190	complement(join(<261241..261405,261475..261621,261703..261787,261854..262055,262154..262246,262319..262603,262670..>262751))	Acanthamoeba castellanii str. Neff	14924053
ACA1_361210	mRNA	ACA1_361210	NW_004457643.1	265494	269725	R	ACA1_361210	complement(join(<265494..265506,265521..266563,266650..266732,266812..266923,267025..267089,267176..267290,267359..267575,267702..267747,267812..268225,268306..268455,268858..269371,269397..269701,269719..>269725))	Acanthamoeba castellanii str. Neff	14924055
ACA1_361220	mRNA	ACA1_361220	NW_004457643.1	269947	271483	D	ACA1_361220	join(<269947..270084,270190..270348,270491..270619,270692..270850,270929..271030,271105..271260,271373..>271483)	Acanthamoeba castellanii str. Neff	14924056
ACA1_361230	mRNA	ACA1_361230	NW_004457643.1	271901	274267	D	ACA1_361230	join(<271901..272720,272819..273302,273421..273528,273601..273692,273820..273978,274062..>274267)	Acanthamoeba castellanii str. Neff	14924057
ACA1_361240	mRNA	ACA1_361240	NW_004457643.1	275052	275636	D	ACA1_361240	join(<275052..275166,275238..275435,275512..>275636)	Acanthamoeba castellanii str. Neff	14924058
ACA1_361250	mRNA	ACA1_361250	NW_004457643.1	275827	277045	R	ACA1_361250	complement(join(<275827..276586,276678..>277045))	Acanthamoeba castellanii str. Neff	14924059
ACA1_361260	mRNA	ACA1_361260	NW_004457643.1	277753	279116	R	ACA1_361260	complement(join(<277753..277884,277958..278095,278173..278274,278411..278535,278692..278711,278749..>279116))	Acanthamoeba castellanii str. Neff	14924060
ACA1_361280	mRNA	ACA1_361280	NW_004457643.1	282575	283837	D	ACA1_361280	join(<282575..282649,282758..282934,283048..283146,283221..283299,283364..283452,283536..283628,283700..>283837)	Acanthamoeba castellanii str. Neff	14924062
ACA1_361290	mRNA	ACA1_361290	NW_004457643.1	283970	284876	D	ACA1_361290	join(<283970..283996,284133..>284876)	Acanthamoeba castellanii str. Neff	14924063
ACA1_361300	mRNA	ACA1_361300	NW_004457643.1	285843	286583	D	ACA1_361300	<285843..>286583	Acanthamoeba castellanii str. Neff	14924064
ACA1_361310	mRNA	ACA1_361310	NW_004457643.1	286695	287920	R	ACA1_361310	complement(join(<286695..286750,286831..286943,287053..287174,287247..287363,287458..287678,287755..>287920))	Acanthamoeba castellanii str. Neff	14924065
ACA1_361420	mRNA	ACA1_361420	NW_004457643.1	289622	290985	D	ACA1_361420	join(<289622..289702,289744..289812,289908..289982,290046..290151,290321..290389,290457..290505,290569..290778,290823..>290985)	Acanthamoeba castellanii str. Neff	14924066
ACA1_361430	mRNA	ACA1_361430	NW_004457643.1	291449	293723	D	ACA1_361430	join(<291449..291632,291726..291838,291931..292113,292201..292276,292362..292460,292529..292632,292717..292819,292910..293207,293341..293444,293546..293595,293670..>293723)	Acanthamoeba castellanii str. Neff	14924067
ACA1_361440	mRNA	ACA1_361440	NW_004457643.1	294209	294604	D	ACA1_361440	join(<294209..294471,294538..>294604)	Acanthamoeba castellanii str. Neff	14924068
ACA1_361450	mRNA	ACA1_361450	NW_004457643.1	294911	295661	R	ACA1_361450	complement(join(<294911..295119,295274..295342,295388..>295661))	Acanthamoeba castellanii str. Neff	14924069
ACA1_361560	mRNA	ACA1_361560	NW_004457643.1	296018	297891	D	ACA1_361560	join(<296018..296186,296279..296307,296403..296547,296662..296951,297072..297145,297241..297399,297501..297629,297719..297830,297883..>297891)	Acanthamoeba castellanii str. Neff	14924070
ACA1_035890	mRNA	ACA1_035890	NW_004457641.1	104	1097	R	ACA1_035890	complement(join(<104..495,583..715,795..938,960..>1097))	Acanthamoeba castellanii str. Neff	14923943
ACA1_036000	mRNA	ACA1_036000	NW_004457641.1	11352	14839	R	ACA1_036000	complement(join(<11352..11517,11656..11757,11860..11976,12088..12203,12336..12464,12583..12728,12834..12983,13155..13329,13453..13569,13887..13962,14064..>14839))	Acanthamoeba castellanii str. Neff	14923885
ACA1_036010	mRNA	ACA1_036010	NW_004457641.1	16664	19956	D	ACA1_036010	join(<16664..16750,16978..17147,17224..17320,17399..17507,17600..17790,17961..18246,18362..18456,18526..19443,19540..>19956)	Acanthamoeba castellanii str. Neff	14923887
ACA1_036020	mRNA	ACA1_036020	NW_004457641.1	20146	21870	D	ACA1_036020	join(<20146..20186,20261..20358,20432..20522,20702..20765,20833..20938,21023..>21870)	Acanthamoeba castellanii str. Neff	14923888
ACA1_036030	mRNA	ACA1_036030	NW_004457641.1	22328	23628	D	ACA1_036030	join(<22328..22424,22509..22613,22825..22882,22977..23131,23237..23328,23521..>23628)	Acanthamoeba castellanii str. Neff	14923886
ACA1_036040	mRNA	ACA1_036040	NW_004457641.1	24233	24891	D	ACA1_036040	join(<24233..24699,24789..>24891)	Acanthamoeba castellanii str. Neff	14923889
ACA1_036050	mRNA	ACA1_036050	NW_004457641.1	25142	25822	D	ACA1_036050	join(<25142..25546,25619..>25822)	Acanthamoeba castellanii str. Neff	14923890
ACA1_036060	mRNA	ACA1_036060	NW_004457641.1	25955	28537	R	ACA1_036060	complement(join(<25955..26396,26461..26608,26675..26877,26962..27080,27181..27264,27985..28043,28129..>28537))	Acanthamoeba castellanii str. Neff	14923891
ACA1_036170	mRNA	ACA1_036170	NW_004457641.1	28601	30118	D	ACA1_036170	join(<28601..29020,29109..29292,29390..29565,29636..>30118)	Acanthamoeba castellanii str. Neff	14923892
ACA1_036180	mRNA	ACA1_036180	NW_004457641.1	30223	35311	R	ACA1_036180	complement(join(<30223..31422,31480..31568,31640..31761,31887..32042,32123..32199,32269..32357,32436..32493,32604..32755,32803..32993,33083..33305,33397..33610,33691..33962,34060..34203,34275..34432,34520..34606,34681..34988,35069..>35311))	Acanthamoeba castellanii str. Neff	14923893
ACA1_036200	mRNA	ACA1_036200	NW_004457641.1	37286	39583	R	ACA1_036200	complement(join(<37286..37339,37440..37716,37797..37912,38019..38125,38218..38823,39028..>39583))	Acanthamoeba castellanii str. Neff	14923895
ACA1_036210	mRNA	ACA1_036210	NW_004457641.1	40731	42094	R	ACA1_036210	complement(join(<40731..41196,41286..41454,41605..41700,41785..41915,42015..>42094))	Acanthamoeba castellanii str. Neff	14923896
ACA1_036220	mRNA	ACA1_036220	NW_004457641.1	43016	43421	D	ACA1_036220	join(<43016..43121,43291..>43421)	Acanthamoeba castellanii str. Neff	14923897
ACA1_036230	mRNA	ACA1_036230	NW_004457641.1	43759	44989	R	ACA1_036230	complement(join(<43759..43999,44117..44252,44338..44441,44546..44629,44746..44840,44951..>44989))	Acanthamoeba castellanii str. Neff	14923898
ACA1_036240	mRNA	ACA1_036240	NW_004457641.1	45576	52021	R	ACA1_036240	complement(join(<45576..45995,46079..46284,46367..46817,47006..47627,47663..47890,47952..48310,48392..48508,48596..48855,48932..49327,49405..49546,49649..49792,49859..50077,50229..50456,50502..50544,50628..50938,51014..51316,51401..51503,51771..51861,51955..>52021))	Acanthamoeba castellanii str. Neff	14923899
ACA1_036260	mRNA	ACA1_036260	NW_004457641.1	60844	63540	R	ACA1_036260	complement(join(<60844..61311,61388..61530,61614..61706,61791..61896,61966..62042,62112..62249,62338..62467,62540..62610,62681..62811,62892..63042,63117..63328,63401..>63540))	Acanthamoeba castellanii str. Neff	14923901
ACA1_036270	mRNA	ACA1_036270	NW_004457641.1	63882	67943	D	ACA1_036270	join(<63882..64095,64182..64363,64485..65027,65119..65194,65276..65350,65440..65558,65641..65837,65922..66287,66378..66502,66593..66686,66771..66897,66991..67041,67071..>67943)	Acanthamoeba castellanii str. Neff	14923902
ACA1_036280	mRNA	ACA1_036280	NW_004457641.1	69177	70395	D	ACA1_036280	join(<69177..69544,69636..>70395)	Acanthamoeba castellanii str. Neff	14923903
ACA1_036290	mRNA	ACA1_036290	NW_004457641.1	71180	73581	R	ACA1_036290	complement(join(<71180..71313,71417..71600,71709..71824,71901..71997,72066..72205,72308..72380,72456..72725,72790..72858,72927..73061,73144..73198,73281..73407,73521..>73581))	Acanthamoeba castellanii str. Neff	14923904
ACA1_036300	mRNA	ACA1_036300	NW_004457641.1	73757	75913	R	ACA1_036300	complement(join(<73757..73936,74016..74123,74238..74357,74500..74631,74700..74775,74843..74975,75039..75111,75193..75234,75254..75370,75468..75587,75655..75791,75871..>75913))	Acanthamoeba castellanii str. Neff	14923905
ACA1_036310	mRNA	ACA1_036310	NW_004457641.1	76145	76903	R	ACA1_036310	complement(join(<76145..76222,76306..76341,76436..76552,76630..76744,76824..>76903))	Acanthamoeba castellanii str. Neff	14923906
ACA1_036320	mRNA	ACA1_036320	NW_004457641.1	77176	78607	R	ACA1_036320	complement(join(<77176..77315,77404..77466,77537..77605,77688..77733,77806..77889,77975..78079,78134..78230,78564..>78607))	Acanthamoeba castellanii str. Neff	14923907
ACA1_036330	mRNA	ACA1_036330	NW_004457641.1	78759	80636	R	ACA1_036330	complement(join(<78759..78967,79050..79119,79207..79395,79489..79612,79679..79801,79898..80022,80107..80302,80449..80513,80592..>80636))	Acanthamoeba castellanii str. Neff	14923908
ACA1_036340	mRNA	ACA1_036340	NW_004457641.1	80855	83290	D	ACA1_036340	join(<80855..81055,81227..81306,81380..81580,81681..81755,81849..81978,82063..82261,82347..82453,82528..82627,82702..82769,82861..83053,83172..>83290)	Acanthamoeba castellanii str. Neff	14923909
ACA1_036350	mRNA	ACA1_036350	NW_004457641.1	83482	84341	D	ACA1_036350	join(<83482..84116,84194..>84341)	Acanthamoeba castellanii str. Neff	14923910
ACA1_036360	mRNA	ACA1_036360	NW_004457641.1	85432	92678	R	ACA1_036360	complement(join(<85432..86079,86242..86337,86423..86623,86689..86796,86886..87077,87144..87445,87527..87660,87743..87898,88005..88170,88260..88440,88504..88559,88626..88950,89035..89198,89288..89382,89445..89584,89662..89745,89823..89980,90074..90228,90346..91229,91305..91460,91539..91943,92045..92147,92235..92404,92568..>92678))	Acanthamoeba castellanii str. Neff	14923911
ACA1_036370	mRNA	ACA1_036370	NW_004457641.1	92858	93404	R	ACA1_036370	complement(join(<92858..93095,93256..>93404))	Acanthamoeba castellanii str. Neff	14923912
ACA1_036380	mRNA	ACA1_036380	NW_004457641.1	93161	93409	D	ACA1_036380	<93161..>93409	Acanthamoeba castellanii str. Neff	14923914
ACA1_036400	mRNA	ACA1_036400	NW_004457641.1	95345	96045	R	ACA1_036400	complement(join(<95345..95364,95673..>96045))	Acanthamoeba castellanii str. Neff	14923915
ACA1_036420	mRNA	ACA1_036420	NW_004457641.1	97633	99758	R	ACA1_036420	complement(join(<97633..98927,99094..99213,99296..99536,99678..>99758))	Acanthamoeba castellanii str. Neff	14923917
ACA1_036440	mRNA	ACA1_036440	NW_004457641.1	101388	102250	R	ACA1_036440	complement(join(<101388..101551,101689..101773,101848..102032,102148..>102250))	Acanthamoeba castellanii str. Neff	14923942
ACA1_036450	mRNA	ACA1_036450	NW_004457641.1	102819	103804	D	ACA1_036450	join(<102819..102954,102985..103164,103289..103407,103532..>103804)	Acanthamoeba castellanii str. Neff	14923919
ACA1_036460	mRNA	ACA1_036460	NW_004457641.1	103849	104368	R	ACA1_036460	complement(join(<103849..103901,104011..>104368))	Acanthamoeba castellanii str. Neff	14923920
ACA1_036470	mRNA	ACA1_036470	NW_004457641.1	104747	110354	D	ACA1_036470	join(<104747..105140,105246..105404,105486..105604,105684..105739,105833..105922,105994..106055,106128..106377,106453..106507,106573..106693,106765..106895,107002..107119,107211..107354,107454..107529,107605..107737,107817..107964,108071..108266,108337..108425,108484..108626,108815..108979,109083..109186,109314..109399,109495..109572,109661..109759,109846..>110354)	Acanthamoeba castellanii str. Neff	14923921
ACA1_036480	mRNA	ACA1_036480	NW_004457641.1	110777	111463	R	ACA1_036480	complement(join(<110777..111313,111386..>111463))	Acanthamoeba castellanii str. Neff	14923922
ACA1_036490	mRNA	ACA1_036490	NW_004457641.1	111896	116288	R	ACA1_036490	complement(join(<111896..112047,112125..112189,112273..112380,112460..112518,112567..112644,112756..112965,113062..113256,113329..113436,113548..113739,113831..113893,113957..114039,114123..114262,114355..114510,114586..114718,114801..114833,114895..114922,114937..115077,115149..115204,115279..115369,115465..115562,115632..115767,115873..116186,116264..>116288))	Acanthamoeba castellanii str. Neff	14923923
ACA1_036500	mRNA	ACA1_036500	NW_004457641.1	117119	119171	R	ACA1_036500	complement(join(<117119..117720,117775..117994,118072..118174,118258..118403,118516..118624,118739..118908,119139..>119171))	Acanthamoeba castellanii str. Neff	14923924
ACA1_036510	mRNA	ACA1_036510	NW_004457641.1	119332	125780	R	ACA1_036510	complement(join(<119332..119951,120031..120468,120574..121526,121599..121957,122047..122163,122232..122491,122562..122812,122882..123029,123114..123249,123323..123505,123541..123782,123856..124205,124294..124478,124560..124685,124773..125087,125156..125284,125407..125467,125539..125638,125702..>125780))	Acanthamoeba castellanii str. Neff	14923925
ACA1_036520	mRNA	ACA1_036520	NW_004457641.1	127260	130542	D	ACA1_036520	join(<127260..127689,127853..128478,128553..128640,128718..128822,128930..129030,129106..129228,129323..129508,129598..129663,129778..129885,129989..130104,130206..130306,130403..>130542)	Acanthamoeba castellanii str. Neff	14923926
ACA1_036530	mRNA	ACA1_036530	NW_004457641.1	131309	133300	D	ACA1_036530	join(<131309..131498,131569..131722,131829..131943,132055..132236,132347..132445,132539..132655,132769..>133300)	Acanthamoeba castellanii str. Neff	14923927
ACA1_036540	mRNA	ACA1_036540	NW_004457641.1	133736	134068	D	ACA1_036540	<133736..>134068	Acanthamoeba castellanii str. Neff	14923928
ACA1_036550	mRNA	ACA1_036550	NW_004457641.1	134884	135090	D	ACA1_036550	<134884..>135090	Acanthamoeba castellanii str. Neff	14923929
ACA1_036560	mRNA	ACA1_036560	NW_004457641.1	137131	139749	D	ACA1_036560	join(<137131..137211,137274..137743,137822..138434,138513..138753,139015..139280,139360..139463,139554..>139749)	Acanthamoeba castellanii str. Neff	14923930
ACA1_036570	mRNA	ACA1_036570	NW_004457641.1	140445	140864	R	ACA1_036570	complement(<140445..>140864)	Acanthamoeba castellanii str. Neff	14923931
ACA1_036580	mRNA	ACA1_036580	NW_004457641.1	141624	142065	R	ACA1_036580	complement(join(<141624..141696,141872..>142065))	Acanthamoeba castellanii str. Neff	14923932
ACA1_036590	mRNA	ACA1_036590	NW_004457641.1	142219	142533	R	ACA1_036590	complement(<142219..>142533)	Acanthamoeba castellanii str. Neff	14923933
ACA1_036610	mRNA	ACA1_036610	NW_004457641.1	146437	151852	D	ACA1_036610	join(<146437..146503,146586..146688,146765..146825,146898..147422,147504..147633,147733..147901,147977..148319,148424..148707,148885..149068,149144..149260,149355..150690,150753..>151852)	Acanthamoeba castellanii str. Neff	14923935
ACA1_036620	mRNA	ACA1_036620	NW_004457641.1	151951	157435	R	ACA1_036620	complement(join(<151951..152093,152163..152233,152388..152505,152596..152719,152795..153091,153188..153282,153449..153572,153659..153766,153900..154088,154223..154437,154557..154690,154780..154814,154829..154928,155025..155126,155220..155283,155368..155589,155670..155760,155828..156061,156181..156368,156425..156626,156731..156900,156973..>157435))	Acanthamoeba castellanii str. Neff	14923936
ACA1_036630	mRNA	ACA1_036630	NW_004457641.1	158310	159809	R	ACA1_036630	complement(join(<158310..158330,158459..158602,158678..158860,158948..159220,159302..159413,159512..159630,159786..>159809))	Acanthamoeba castellanii str. Neff	14923937
ACA1_036640	mRNA	ACA1_036640	NW_004457641.1	159993	161867	R	ACA1_036640	complement(join(<159993..160409,160475..160570,160635..160722,160802..160923,160987..161310,161534..161667,161732..>161867))	Acanthamoeba castellanii str. Neff	14923938
ACA1_036650	mRNA	ACA1_036650	NW_004457641.1	163570	164999	R	ACA1_036650	complement(join(<163570..163646,163791..164010,164110..164234,164292..164396,164481..164639,164759..>164999))	Acanthamoeba castellanii str. Neff	14923939
ACA1_036660	mRNA	ACA1_036660	NW_004457641.1	165082	167187	R	ACA1_036660	complement(join(<165082..165294,165370..165510,165596..165693,166042..166125,166216..166315,166397..166527,166615..166690,166777..166868,166954..167056,167146..>167187))	Acanthamoeba castellanii str. Neff	14923940
ACA1_036670	mRNA	ACA1_036670	NW_004457641.1	167691	168523	D	ACA1_036670	join(<167691..167790,167858..168049,168133..168191,168332..>168523)	Acanthamoeba castellanii str. Neff	14923941
ACA1_395650	mRNA	ACA1_395650	NW_004457640.1	468	1275	D	ACA1_395650	join(<468..495,615..722,833..963,1118..1213,1231..>1275)	Acanthamoeba castellanii str. Neff	14923884
ACA1_395760	mRNA	ACA1_395760	NW_004457640.1	6868	7965	R	ACA1_395760	complement(join(<6868..6936,7039..7162,7254..7313,7376..7514,7625..7771,7851..>7965))	Acanthamoeba castellanii str. Neff	14923785
ACA1_395870	mRNA	ACA1_395870	NW_004457640.1	14228	14632	D	ACA1_395870	join(<14228..14285,14359..14439,14512..14594,14624..>14632)	Acanthamoeba castellanii str. Neff	14923786
ACA1_395980	mRNA	ACA1_395980	NW_004457640.1	16689	18849	D	ACA1_395980	join(<16689..16790,16880..17127,17572..17696,17821..17956,18028..18088,18161..18244,18269..18409,18504..18641,18757..>18849)	Acanthamoeba castellanii str. Neff	14923787
ACA1_396090	mRNA	ACA1_396090	NW_004457640.1	19104	20093	R	ACA1_396090	complement(join(<19104..19246,19349..19443,19592..19898,19970..>20093))	Acanthamoeba castellanii str. Neff	14923783
ACA1_396100	mRNA	ACA1_396100	NW_004457640.1	20212	21000	D	ACA1_396100	join(<20212..20223,20351..20548,20565..20735,20908..>21000)	Acanthamoeba castellanii str. Neff	14923784
ACA1_396110	mRNA	ACA1_396110	NW_004457640.1	21366	22646	D	ACA1_396110	join(<21366..21539,21696..21834,21969..22166,22288..>22646)	Acanthamoeba castellanii str. Neff	14923788
ACA1_396120	mRNA	ACA1_396120	NW_004457640.1	22872	24095	R	ACA1_396120	complement(join(<22872..22966,23068..23224,23329..23739,23863..23911,24034..>24095))	Acanthamoeba castellanii str. Neff	14923789
ACA1_396130	mRNA	ACA1_396130	NW_004457640.1	24609	25485	R	ACA1_396130	complement(join(<24609..24761,24867..24941,25061..25092,25193..25295,25393..>25485))	Acanthamoeba castellanii str. Neff	14923790
ACA1_396140	mRNA	ACA1_396140	NW_004457640.1	25563	25898	D	ACA1_396140	<25563..>25898	Acanthamoeba castellanii str. Neff	14923791
ACA1_396150	mRNA	ACA1_396150	NW_004457640.1	26206	40933	D	ACA1_396150	join(<26206..26458,26528..26898,26988..27115,27184..27293,27395..28092,28188..28375,28453..28954,29032..29189,29263..31108,31160..33910,34230..39497,39560..39622,39659..39955,40127..>40933)	Acanthamoeba castellanii str. Neff	14923792
ACA1_396170	mRNA	ACA1_396170	NW_004457640.1	44092	46271	R	ACA1_396170	complement(join(<44092..44228,44311..44380,44444..44563,44645..44770,44867..44989,45106..45201,45301..45431,45544..45748,45839..46000,46128..>46271))	Acanthamoeba castellanii str. Neff	14923794
ACA1_396180	mRNA	ACA1_396180	NW_004457640.1	46305	47120	R	ACA1_396180	complement(join(<46305..46496,46608..46668,46773..46855,46935..46996,47066..>47120))	Acanthamoeba castellanii str. Neff	14923795
ACA1_396190	mRNA	ACA1_396190	NW_004457640.1	47403	49836	D	ACA1_396190	join(<47403..47522,47638..>49836)	Acanthamoeba castellanii str. Neff	14923796
ACA1_396200	mRNA	ACA1_396200	NW_004457640.1	50074	51533	D	ACA1_396200	join(<50074..50782,50861..51005,51107..51201,51287..51394,51490..>51533)	Acanthamoeba castellanii str. Neff	14923797
ACA1_396210	mRNA	ACA1_396210	NW_004457640.1	53389	55910	D	ACA1_396210	join(<53389..53434,53514..53758,53913..54050,54181..54263,54404..54500,54631..54784,54883..55006,55105..55396,55554..>55910)	Acanthamoeba castellanii str. Neff	14923798
ACA1_396220	mRNA	ACA1_396220	NW_004457640.1	56094	59075	D	ACA1_396220	join(<56094..56583,56732..56800,56884..56994,57080..57330,57403..57623,57686..57977,58083..58208,58338..58490,58637..58945,59025..>59075)	Acanthamoeba castellanii str. Neff	14923799
ACA1_396230	mRNA	ACA1_396230	NW_004457640.1	59487	60756	D	ACA1_396230	join(<59487..59559,59892..59926,59956..>60756)	Acanthamoeba castellanii str. Neff	14923800
ACA1_396240	mRNA	ACA1_396240	NW_004457640.1	60980	62622	D	ACA1_396240	join(<60980..61031,61225..61305,61416..61669,61777..61848,61905..62078,62127..62195,62281..>62622)	Acanthamoeba castellanii str. Neff	14923801
ACA1_396250	mRNA	ACA1_396250	NW_004457640.1	62745	64991	R	ACA1_396250	complement(join(<62745..63396,63477..63532,63617..64003,64110..>64991))	Acanthamoeba castellanii str. Neff	14923802
ACA1_396260	mRNA	ACA1_396260	NW_004457640.1	65242	67131	D	ACA1_396260	join(<65242..65295,65403..65637,65741..65775,65980..66015,66112..66186,66389..66490,66585..66675,66814..66972,67082..>67131)	Acanthamoeba castellanii str. Neff	14923803
ACA1_396270	mRNA	ACA1_396270	NW_004457640.1	67833	70660	D	ACA1_396270	join(<67833..68522,68600..68685,68795..69013,69076..69685,69772..69909,70027..70156,70290..70368,70456..>70660)	Acanthamoeba castellanii str. Neff	14923804
ACA1_396280	mRNA	ACA1_396280	NW_004457640.1	70750	72671	R	ACA1_396280	complement(join(<70750..71081,71221..71340,71541..71717,71816..71927,72078..>72671))	Acanthamoeba castellanii str. Neff	14923805
ACA1_396290	mRNA	ACA1_396290	NW_004457640.1	72886	74415	D	ACA1_396290	join(<72886..73069,73282..73399,73497..73586,73719..73953,74044..>74415)	Acanthamoeba castellanii str. Neff	14923806
ACA1_396300	mRNA	ACA1_396300	NW_004457640.1	74695	75572	R	ACA1_396300	complement(join(<74695..74853,74952..>75572))	Acanthamoeba castellanii str. Neff	14923807
ACA1_396310	mRNA	ACA1_396310	NW_004457640.1	75773	79576	D	ACA1_396310	join(<75773..75921,76065..76128,76211..76294,76431..76546,76830..77013,77076..77318,77365..77648,77780..77861,77924..77987,79266..>79576)	Acanthamoeba castellanii str. Neff	14923808
ACA1_396420	mRNA	ACA1_396420	NW_004457640.1	79667	83088	R	ACA1_396420	complement(join(<79667..79821,79970..80129,80898..80990,81095..81166,81349..81441,81574..81615,81750..81802,81944..82070,82219..82281,82544..82780,82981..>83088))	Acanthamoeba castellanii str. Neff	14923809
ACA1_396530	mRNA	ACA1_396530	NW_004457640.1	83362	84549	R	ACA1_396530	complement(join(<83362..83523,83552..83713,83795..83854,83930..84019,84125..84221,84300..84412,84511..>84549))	Acanthamoeba castellanii str. Neff	14923810
ACA1_396540	mRNA	ACA1_396540	NW_004457640.1	85446	87309	D	ACA1_396540	join(<85446..85808,85937..86140,86236..86379,86498..86764,86902..87111,87211..>87309)	Acanthamoeba castellanii str. Neff	14923811
ACA1_396550	mRNA	ACA1_396550	NW_004457640.1	87468	90523	R	ACA1_396550	complement(join(<87468..88126,89283..89316,89375..89524,89609..89756,89853..89949,90041..90150,90219..90320,90420..>90523))	Acanthamoeba castellanii str. Neff	14923812
ACA1_396660	mRNA	ACA1_396660	NW_004457640.1	90742	91543	D	ACA1_396660	join(<90742..91189,91347..91424,91479..>91543)	Acanthamoeba castellanii str. Neff	14923813
ACA1_396670	mRNA	ACA1_396670	NW_004457640.1	92083	93008	D	ACA1_396670	join(<92083..92344,92595..92717,92872..>93008)	Acanthamoeba castellanii str. Neff	14923814
ACA1_396680	mRNA	ACA1_396680	NW_004457640.1	93097	95119	R	ACA1_396680	complement(join(<93097..93300,93439..93949,94051..94343,94449..94468,94580..94720,94816..>95119))	Acanthamoeba castellanii str. Neff	14923815
ACA1_396690	mRNA	ACA1_396690	NW_004457640.1	95248	99249	R	ACA1_396690	complement(join(<95248..95412,95450..95815,96043..96146,96417..96500,96646..96757,96924..97052,97154..97350,97381..97469,97638..97702,97857..98015,98344..98446,98551..98639,98663..98700,98732..98831,98923..99052,99242..>99249))	Acanthamoeba castellanii str. Neff	14923816
ACA1_396700	mRNA	ACA1_396700	NW_004457640.1	100753	103388	D	ACA1_396700	join(<100753..101070,101224..101377,101394..101643,101800..102089,102317..102371,102394..102506,102634..102810,102931..103123,103235..>103388)	Acanthamoeba castellanii str. Neff	14923817
ACA1_396710	mRNA	ACA1_396710	NW_004457640.1	103832	107119	R	ACA1_396710	complement(join(<103832..104221,104349..104507,104704..104861,104958..105168,105328..105573,105717..105818,105918..106306,106439..106981,107050..>107119))	Acanthamoeba castellanii str. Neff	14923818
ACA1_396720	mRNA	ACA1_396720	NW_004457640.1	107303	108054	D	ACA1_396720	join(<107303..107324,107396..107562,107662..>108054)	Acanthamoeba castellanii str. Neff	14923819
ACA1_396730	mRNA	ACA1_396730	NW_004457640.1	108162	111780	D	ACA1_396730	join(<108162..108422,108508..108623,108880..109062,109211..109378,109602..109813,109918..110114,110212..110354,110523..110598,110835..111014,111117..111209,111271..111339,111421..111540,111613..>111780)	Acanthamoeba castellanii str. Neff	14923820
ACA1_396740	mRNA	ACA1_396740	NW_004457640.1	111866	113672	R	ACA1_396740	complement(join(<111866..112032,112143..112235,112328..112349,112436..112528,112701..>113672))	Acanthamoeba castellanii str. Neff	14923821
ACA1_396750	mRNA	ACA1_396750	NW_004457640.1	113988	117775	D	ACA1_396750	join(<113988..114045,114112..114202,114601..114733,114917..114997,115121..115266,115438..115533,115594..115777,115964..116003,116159..116256,116274..116450,116671..116704,116956..117189,117317..117510,117629..>117775)	Acanthamoeba castellanii str. Neff	14923822
ACA1_396760	mRNA	ACA1_396760	NW_004457640.1	118490	131726	D	ACA1_396760	join(<118490..118501,118666..118796,118947..119045,119189..119315,119469..119582,119738..119836,119907..119995,120105..120282,120489..120569,120692..120811,121040..121126,121270..121358,121654..121746,122025..122186,122354..122444,122651..122763,122967..123114,123254..123337,123457..124054,124968..125109,125337..125427,125808..125880,126013..126151,126304..126866,127024..127073,127102..127173,127223..127382,127503..127622,127876..128066,128183..128315,128552..128741,129028..129101,129282..129709,129910..130235,130361..130782,130861..130979,131199..>131726)	Acanthamoeba castellanii str. Neff	14923823
ACA1_396870	mRNA	ACA1_396870	NW_004457640.1	131928	134415	D	ACA1_396870	join(<131928..132116,132507..132704,132999..133078,133142..133518,133602..133716,133800..133985,134058..>134415)	Acanthamoeba castellanii str. Neff	14923824
ACA1_396880	mRNA	ACA1_396880	NW_004457640.1	138336	140283	D	ACA1_396880	join(<138336..138434,138590..138748,138988..139067,139205..139316,139390..139578,139663..139779,139874..139915,140110..>140283)	Acanthamoeba castellanii str. Neff	14923825
ACA1_396890	mRNA	ACA1_396890	NW_004457640.1	141619	142058	D	ACA1_396890	join(<141619..141660,141777..>142058)	Acanthamoeba castellanii str. Neff	14923826
ACA1_396900	mRNA	ACA1_396900	NW_004457640.1	142917	144827	D	ACA1_396900	join(<142917..142945,143044..143116,143166..143225,143342..143423,143505..143600,143694..143774,143871..143971,144052..144210,144391..144451,144754..>144827)	Acanthamoeba castellanii str. Neff	14923827
ACA1_396910	mRNA	ACA1_396910	NW_004457640.1	145591	148739	R	ACA1_396910	complement(join(<145591..145836,145958..146102,146283..146361,146497..146558,146710..146782,146952..147028,147309..147379,147507..147608,147672..147838,147995..148121,148287..148549,148661..>148739))	Acanthamoeba castellanii str. Neff	14923828
ACA1_396920	mRNA	ACA1_396920	NW_004457640.1	149007	150132	R	ACA1_396920	complement(join(<149007..149139,149282..149436,149524..149638,149848..149923,150033..>150132))	Acanthamoeba castellanii str. Neff	14923829
ACA1_396930	mRNA	ACA1_396930	NW_004457640.1	150570	152451	D	ACA1_396930	join(<150570..150650,150881..151004,151198..151322,151473..151602,151745..>152451)	Acanthamoeba castellanii str. Neff	14923830
ACA1_396940	mRNA	ACA1_396940	NW_004457640.1	152630	154719	R	ACA1_396940	complement(join(<152630..152680,152879..153073,153201..153341,153497..153575,153751..153824,154044..154158,154349..154536,154666..>154719))	Acanthamoeba castellanii str. Neff	14923831
ACA1_396950	mRNA	ACA1_396950	NW_004457640.1	155141	155521	D	ACA1_396950	<155141..>155521	Acanthamoeba castellanii str. Neff	14923832
ACA1_396960	mRNA	ACA1_396960	NW_004457640.1	155982	156804	D	ACA1_396960	join(<155982..156329,156427..>156804)	Acanthamoeba castellanii str. Neff	14923833
ACA1_396970	mRNA	ACA1_396970	NW_004457640.1	156873	161468	R	ACA1_396970	complement(join(<156873..157069,157143..157303,157398..157495,157661..157730,157802..157879,157976..158071,158490..158736,158799..158872,158939..159069,159139..159173,159330..159494,159563..159667,159701..159758,159820..159895,159924..159962,160013..160131,160237..160296,160373..160477,160666..160740,160808..160942,161019..>161468))	Acanthamoeba castellanii str. Neff	14923834
ACA1_397180	mRNA	ACA1_397180	NW_004457640.1	163490	167408	R	ACA1_397180	complement(join(<163490..163589,163669..163759,164034..164159,164248..164323,164431..164558,164636..164727,164801..164907,164993..165084,165170..165278,165350..165490,165574..165710,165822..165904,165980..166065,166172..166301,166383..166455,166541..166697,166829..166987,167082..167166,167246..167346,167382..>167408))	Acanthamoeba castellanii str. Neff	14923835
ACA1_397190	mRNA	ACA1_397190	NW_004457640.1	167791	169704	D	ACA1_397190	join(<167791..167925,168045..168159,168238..168316,168389..168448,168532..168713,168807..168988,169063..169163,169243..169363,169447..169527,169612..>169704)	Acanthamoeba castellanii str. Neff	14923836
ACA1_397200	mRNA	ACA1_397200	NW_004457640.1	169898	170970	R	ACA1_397200	complement(join(<169898..170042,170130..170358,170436..170832,170905..>170970))	Acanthamoeba castellanii str. Neff	14923837
ACA1_397210	mRNA	ACA1_397210	NW_004457640.1	171563	171957	R	ACA1_397210	complement(join(<171563..171614,171722..171836,171915..>171957))	Acanthamoeba castellanii str. Neff	14923838
ACA1_397220	mRNA	ACA1_397220	NW_004457640.1	172010	172617	R	ACA1_397220	complement(join(<172010..172096,172187..172309,172417..>172617))	Acanthamoeba castellanii str. Neff	14923839
ACA1_397230	mRNA	ACA1_397230	NW_004457640.1	173035	174272	D	ACA1_397230	join(<173035..173350,173440..173631,173718..173886,173972..>174272)	Acanthamoeba castellanii str. Neff	14923840
ACA1_397240	mRNA	ACA1_397240	NW_004457640.1	174388	174762	D	ACA1_397240	join(<174388..174706,174755..>174762)	Acanthamoeba castellanii str. Neff	14923841
ACA1_397250	mRNA	ACA1_397250	NW_004457640.1	175582	176639	D	ACA1_397250	join(<175582..175685,175892..176016,176093..176473,176537..176556,176619..>176639)	Acanthamoeba castellanii str. Neff	14923842
ACA1_397260	mRNA	ACA1_397260	NW_004457640.1	177764	178481	R	ACA1_397260	complement(join(<177764..178219,178237..178282,178360..>178481))	Acanthamoeba castellanii str. Neff	14923843
ACA1_397270	mRNA	ACA1_397270	NW_004457640.1	178700	180889	D	ACA1_397270	join(<178700..179311,179418..179588,179686..179799,179842..179879,179958..180124,180245..180436,180539..180635,180709..>180889)	Acanthamoeba castellanii str. Neff	14923844
ACA1_397280	mRNA	ACA1_397280	NW_004457640.1	181032	184690	D	ACA1_397280	join(<181032..181224,182411..182544,182637..182789,182880..183114,183220..183394,184273..184359,184459..>184690)	Acanthamoeba castellanii str. Neff	14923845
ACA1_397490	mRNA	ACA1_397490	NW_004457640.1	184835	185125	D	ACA1_397490	<184835..>185125	Acanthamoeba castellanii str. Neff	14923846
ACA1_397500	mRNA	ACA1_397500	NW_004457640.1	186258	187087	R	ACA1_397500	complement(join(<186258..186845,187025..>187087))	Acanthamoeba castellanii str. Neff	14923847
ACA1_397510	mRNA	ACA1_397510	NW_004457640.1	188765	189352	D	ACA1_397510	join(<188765..189023,189045..>189352)	Acanthamoeba castellanii str. Neff	14923848
ACA1_397520	mRNA	ACA1_397520	NW_004457640.1	191343	192842	R	ACA1_397520	complement(join(<191343..191949,191969..192139,192214..192520,192669..192717,192798..>192842))	Acanthamoeba castellanii str. Neff	14923849
ACA1_397630	mRNA	ACA1_397630	NW_004457640.1	193251	193603	D	ACA1_397630	join(<193251..193334,193346..>193603)	Acanthamoeba castellanii str. Neff	14923850
ACA1_397840	mRNA	ACA1_397840	NW_004457640.1	197297	197914	D	ACA1_397840	join(<197297..197448,197503..>197914)	Acanthamoeba castellanii str. Neff	14923851
ACA1_397850	mRNA	ACA1_397850	NW_004457640.1	197940	198514	R	ACA1_397850	complement(join(<197940..197958,198138..198234,198332..198369,198438..>198514))	Acanthamoeba castellanii str. Neff	14923852
ACA1_397960	mRNA	ACA1_397960	NW_004457640.1	200970	202439	D	ACA1_397960	join(<200970..201074,201208..201331,201460..201612,201721..201876,202124..202183,202258..>202439)	Acanthamoeba castellanii str. Neff	14923853
ACA1_398070	mRNA	ACA1_398070	NW_004457640.1	206879	207370	R	ACA1_398070	complement(join(<206879..207051,207136..207234,207334..>207370))	Acanthamoeba castellanii str. Neff	14923854
ACA1_398080	mRNA	ACA1_398080	NW_004457640.1	207397	208301	R	ACA1_398080	complement(join(<207397..207639,207737..207988,208092..>208301))	Acanthamoeba castellanii str. Neff	14923855
ACA1_398190	mRNA	ACA1_398190	NW_004457640.1	211820	214255	R	ACA1_398190	complement(join(<211820..212146,212235..212372,212445..212552,212673..212848,212915..213001,213130..213199,213275..213373,213446..213576,213645..213723,213811..213879,213979..214074,214133..>214255))	Acanthamoeba castellanii str. Neff	14923856
ACA1_398200	mRNA	ACA1_398200	NW_004457640.1	214599	215054	D	ACA1_398200	<214599..>215054	Acanthamoeba castellanii str. Neff	14923857
ACA1_398310	mRNA	ACA1_398310	NW_004457640.1	218114	218434	R	ACA1_398310	complement(join(<218114..218164,218231..>218434))	Acanthamoeba castellanii str. Neff	14923858
ACA1_398320	mRNA	ACA1_398320	NW_004457640.1	219125	220263	D	ACA1_398320	join(<219125..219313,219427..219518,219705..219900,220009..>220263)	Acanthamoeba castellanii str. Neff	14923859
ACA1_398330	mRNA	ACA1_398330	NW_004457640.1	220424	222447	R	ACA1_398330	complement(join(<220424..220579,220664..220769,220853..220958,221101..221280,221390..221510,221594..221679,221768..221832,221878..221954,222059..222184,222292..>222447))	Acanthamoeba castellanii str. Neff	14923860
ACA1_398440	mRNA	ACA1_398440	NW_004457640.1	225119	226863	R	ACA1_398440	complement(join(<225119..225214,225318..225494,225605..225728,225853..225987,226082..226213,226331..>226863))	Acanthamoeba castellanii str. Neff	14923861
ACA1_398450	mRNA	ACA1_398450	NW_004457640.1	227785	230236	R	ACA1_398450	complement(join(<227785..228433,229121..229290,229376..229558,229819..229892,230197..>230236))	Acanthamoeba castellanii str. Neff	14923862
ACA1_398660	mRNA	ACA1_398660	NW_004457640.1	232156	234582	R	ACA1_398660	complement(join(<232156..232494,232604..232978,233320..233670,233790..233937,234013..234111,234198..234385,234505..>234582))	Acanthamoeba castellanii str. Neff	14923863
ACA1_398870	mRNA	ACA1_398870	NW_004457640.1	235330	238106	R	ACA1_398870	complement(join(<235330..235416,235527..235703,235789..235980,236049..236138,236305..236407,236508..236656,236803..236900,236990..237107,237266..237371,237520..237641,237756..>238106))	Acanthamoeba castellanii str. Neff	14923864
ACA1_398880	mRNA	ACA1_398880	NW_004457640.1	238278	239755	R	ACA1_398880	complement(join(<238278..238604,238666..238838,238911..238990,239065..239147,239256..239351,239449..239513,239668..>239755))	Acanthamoeba castellanii str. Neff	14923865
ACA1_398890	mRNA	ACA1_398890	NW_004457640.1	240036	240570	D	ACA1_398890	join(<240036..240075,240162..240284,240416..>240570)	Acanthamoeba castellanii str. Neff	14923866
ACA1_398900	mRNA	ACA1_398900	NW_004457640.1	240731	242060	R	ACA1_398900	complement(join(<240731..240945,241029..241276,241379..241605,241702..241937,242021..>242060))	Acanthamoeba castellanii str. Neff	14923867
ACA1_398910	mRNA	ACA1_398910	NW_004457640.1	242427	248983	R	ACA1_398910	complement(join(<242427..242607,242715..242799,242898..242983,243084..243183,243294..243349,243494..243559,243649..243731,243861..243921,244012..244259,244345..244413,244494..244556,244683..244901,244949..245169,245261..245451,245591..245682,245805..246002,246167..246418,246500..246595,246685..246843,247014..247214,247324..247405,247476..247658,247778..247899,248023..248124,248221..248318,248439..248487,248639..>248983))	Acanthamoeba castellanii str. Neff	14923868
ACA1_398920	mRNA	ACA1_398920	NW_004457640.1	249240	252161	D	ACA1_398920	join(<249240..249722,249847..249965,250066..250240,250367..250401,250484..250550,250670..250776,250858..250955,251044..251170,251292..251393,251477..251566,251688..251814,251916..>252161)	Acanthamoeba castellanii str. Neff	14923869
ACA1_398930	mRNA	ACA1_398930	NW_004457640.1	252286	253882	D	ACA1_398930	join(<252286..252345,252604..252807,252969..253135,253247..253354,253506..253623,253718..>253882)	Acanthamoeba castellanii str. Neff	14923870
ACA1_398940	mRNA	ACA1_398940	NW_004457640.1	254827	255597	D	ACA1_398940	join(<254827..254957,255207..>255597)	Acanthamoeba castellanii str. Neff	14923871
ACA1_398950	mRNA	ACA1_398950	NW_004457640.1	255729	258181	D	ACA1_398950	join(<255729..255875,256008..256427,257530..257949,258077..>258181)	Acanthamoeba castellanii str. Neff	14923872
ACA1_399060	mRNA	ACA1_399060	NW_004457640.1	258860	259843	D	ACA1_399060	<258860..>259843	Acanthamoeba castellanii str. Neff	14923873
ACA1_399070	mRNA	ACA1_399070	NW_004457640.1	260742	260978	R	ACA1_399070	complement(<260742..>260978)	Acanthamoeba castellanii str. Neff	14923874
ACA1_399180	mRNA	ACA1_399180	NW_004457640.1	261558	262736	R	ACA1_399180	complement(join(<261558..261689,261768..>262736))	Acanthamoeba castellanii str. Neff	14923875
ACA1_399190	mRNA	ACA1_399190	NW_004457640.1	263232	267541	D	ACA1_399190	join(<263232..263713,263860..264068,264141..264226,264371..264546,264566..264731,264792..264912,265036..265229,265366..265467,265556..265657,265767..265933,266077..266186,266317..266416,266527..>267541)	Acanthamoeba castellanii str. Neff	14923876
ACA1_399200	mRNA	ACA1_399200	NW_004457640.1	267829	272589	R	ACA1_399200	complement(join(<267829..267892,267977..268111,268190..268761,268884..269208,269334..269573,269667..269871,269968..270197,270372..270590,270678..270927,271029..271147,271249..271418,271513..>272589))	Acanthamoeba castellanii str. Neff	14923877
ACA1_399210	mRNA	ACA1_399210	NW_004457640.1	273427	275205	D	ACA1_399210	join(<273427..273603,273695..273836,273939..274014,274159..274228,274318..274503,274589..274837,274963..>275205)	Acanthamoeba castellanii str. Neff	14923878
ACA1_399220	mRNA	ACA1_399220	NW_004457640.1	275288	277036	D	ACA1_399220	join(<275288..275397,275509..275591,275668..276254,276366..276543,276651..>277036)	Acanthamoeba castellanii str. Neff	14923879
ACA1_399230	mRNA	ACA1_399230	NW_004457640.1	277161	278364	D	ACA1_399230	join(<277161..277321,277406..277464,277529..277602,277690..277752,277860..277977,278035..278207,278305..>278364)	Acanthamoeba castellanii str. Neff	14923880
ACA1_399240	mRNA	ACA1_399240	NW_004457640.1	278616	280960	D	ACA1_399240	join(<278616..278858,278923..278994,279067..279138,279281..279360,279459..279552,279684..279839,279939..280027,280122..280409,280439..280606,280721..280778,280877..>280960)	Acanthamoeba castellanii str. Neff	14923881
ACA1_399250	mRNA	ACA1_399250	NW_004457640.1	281168	281574	D	ACA1_399250	join(<281168..281487,281544..>281574)	Acanthamoeba castellanii str. Neff	14923882
ACA1_399260	mRNA	ACA1_399260	NW_004457640.1	281618	282783	D	ACA1_399260	join(<281618..281795,281914..282005,282115..>282783)	Acanthamoeba castellanii str. Neff	14923883
ACA1_148440	mRNA	ACA1_148440	NW_004457638.1	3593	5103	D	ACA1_148440	join(<3593..3665,3745..3896,3971..4126,4223..4308,4455..4553,4615..4739,4832..4902,5017..>5103)	Acanthamoeba castellanii str. Neff	14923782
ACA1_148450	mRNA	ACA1_148450	NW_004457638.1	5207	5530	R	ACA1_148450	complement(<5207..>5530)	Acanthamoeba castellanii str. Neff	14923683
ACA1_148460	mRNA	ACA1_148460	NW_004457638.1	5754	7479	R	ACA1_148460	complement(join(<5754..5782,5880..5910,5998..6067,6181..6273,6373..6452,6598..6674,6786..6907,7013..7109,7251..>7479))	Acanthamoeba castellanii str. Neff	14923676
ACA1_148470	mRNA	ACA1_148470	NW_004457638.1	7738	8497	D	ACA1_148470	join(<7738..8168,8326..>8497)	Acanthamoeba castellanii str. Neff	14923677
ACA1_148480	mRNA	ACA1_148480	NW_004457638.1	8852	11310	R	ACA1_148480	complement(join(<8852..10372,10618..10674,10769..10885,11005..>11310))	Acanthamoeba castellanii str. Neff	14923678
ACA1_148490	mRNA	ACA1_148490	NW_004457638.1	11893	15058	R	ACA1_148490	complement(join(<11893..12573,12705..13991,14087..14220,14302..14412,14572..14588,14746..14902,15006..15034,15054..>15058))	Acanthamoeba castellanii str. Neff	14923679
ACA1_148500	mRNA	ACA1_148500	NW_004457638.1	15341	18000	D	ACA1_148500	join(<15341..15392,15464..15531,15600..15661,15788..15866,15981..16091,16278..16428,16506..16679,16743..16921,17017..17163,17267..17413,17507..17587,17714..17784,17868..>18000)	Acanthamoeba castellanii str. Neff	14923680
ACA1_148510	mRNA	ACA1_148510	NW_004457638.1	18301	19628	D	ACA1_148510	join(<18301..18658,18763..18858,18939..19043,19086..19134,19246..19388,19498..>19628)	Acanthamoeba castellanii str. Neff	14923681
ACA1_148520	mRNA	ACA1_148520	NW_004457638.1	20049	26768	D	ACA1_148520	join(<20049..20660,20821..20950,21086..21219,21310..21449,21598..22200,22351..22493,22590..23131,23261..23348,23449..23532,23677..23791,23939..24136,24251..24321,24444..24601,24697..24819,24988..25107,25203..25306,25396..26606,26683..>26768)	Acanthamoeba castellanii str. Neff	14923682
ACA1_148530	mRNA	ACA1_148530	NW_004457638.1	26889	29102	R	ACA1_148530	complement(join(<26889..27725,27819..28070,28295..28402,28492..28605,28687..28885,28939..>29102))	Acanthamoeba castellanii str. Neff	14923684
ACA1_148540	mRNA	ACA1_148540	NW_004457638.1	29442	30220	D	ACA1_148540	join(<29442..29721,29837..29985,30125..>30220)	Acanthamoeba castellanii str. Neff	14923685
ACA1_148550	mRNA	ACA1_148550	NW_004457638.1	30444	33336	D	ACA1_148550	join(<30444..30567,30644..30727,30807..30881,31282..31497,31554..31620,31746..31843,31935..32054,32120..32269,32354..32478,32559..32868,32945..>33336)	Acanthamoeba castellanii str. Neff	14923686
ACA1_148660	mRNA	ACA1_148660	NW_004457638.1	33429	34571	R	ACA1_148660	complement(join(<33429..33819,33886..34017,34156..34342,34406..>34571))	Acanthamoeba castellanii str. Neff	14923687
ACA1_148670	mRNA	ACA1_148670	NW_004457638.1	35032	36421	R	ACA1_148670	complement(join(<35032..35274,35359..35562,35644..35879,35983..>36421))	Acanthamoeba castellanii str. Neff	14923688
ACA1_148780	mRNA	ACA1_148780	NW_004457638.1	42474	44374	R	ACA1_148780	complement(join(<42474..42716,42796..42860,43031..44010,44157..44238,44335..>44374))	Acanthamoeba castellanii str. Neff	14923689
ACA1_148890	mRNA	ACA1_148890	NW_004457638.1	45237	45488	D	ACA1_148890	join(<45237..45312,45391..>45488)	Acanthamoeba castellanii str. Neff	14923690
ACA1_149000	mRNA	ACA1_149000	NW_004457638.1	47258	48825	D	ACA1_149000	join(<47258..47387,47465..47533,47609..47686,47764..47841,47914..48078,48160..48326,48414..48544,48666..>48825)	Acanthamoeba castellanii str. Neff	14923691
ACA1_149010	mRNA	ACA1_149010	NW_004457638.1	49349	50776	D	ACA1_149010	join(<49349..49649,49791..>50776)	Acanthamoeba castellanii str. Neff	14923692
ACA1_149020	mRNA	ACA1_149020	NW_004457638.1	51568	52308	D	ACA1_149020	<51568..>52308	Acanthamoeba castellanii str. Neff	14923693
ACA1_149030	mRNA	ACA1_149030	NW_004457638.1	52782	54517	D	ACA1_149030	join(<52782..53152,53217..53334,53388..53559,53641..53796,53868..53929,54019..54266,54394..>54517)	Acanthamoeba castellanii str. Neff	14923694
ACA1_149040	mRNA	ACA1_149040	NW_004457638.1	54624	56749	R	ACA1_149040	complement(join(<54624..55004,55072..55273,55382..55446,55543..55702,55809..55970,56098..56235,56376..>56749))	Acanthamoeba castellanii str. Neff	14923695
ACA1_149050	mRNA	ACA1_149050	NW_004457638.1	57159	58024	D	ACA1_149050	join(<57159..57788,57911..>58024)	Acanthamoeba castellanii str. Neff	14923696
ACA1_149060	mRNA	ACA1_149060	NW_004457638.1	58390	59606	D	ACA1_149060	join(<58390..58516,58592..58852,58992..59151,59246..>59606)	Acanthamoeba castellanii str. Neff	14923697
ACA1_149070	mRNA	ACA1_149070	NW_004457638.1	59926	60329	R	ACA1_149070	complement(join(<59926..60249,60270..>60329))	Acanthamoeba castellanii str. Neff	14923698
ACA1_149080	mRNA	ACA1_149080	NW_004457638.1	61633	62971	D	ACA1_149080	join(<61633..61668,61768..62108,62161..62386,62439..62645,62690..>62971)	Acanthamoeba castellanii str. Neff	14923699
ACA1_149090	mRNA	ACA1_149090	NW_004457638.1	65524	67365	R	ACA1_149090	complement(join(<65524..65705,65855..66065,66240..66385,66479..66752,66856..67074,67195..>67365))	Acanthamoeba castellanii str. Neff	14923700
ACA1_149110	mRNA	ACA1_149110	NW_004457638.1	73809	75310	D	ACA1_149110	join(<73809..73982,74093..74398,74819..75064,75179..>75310)	Acanthamoeba castellanii str. Neff	14923702
ACA1_149120	mRNA	ACA1_149120	NW_004457638.1	75438	77046	R	ACA1_149120	complement(join(<75438..75533,75618..76066,76147..76239,76322..76520,76603..76710,76813..>77046))	Acanthamoeba castellanii str. Neff	14923703
ACA1_149130	mRNA	ACA1_149130	NW_004457638.1	78648	81328	D	ACA1_149130	join(<78648..78949,79128..79225,79528..80183,80362..80484,80609..80740,80939..81070,81158..>81328)	Acanthamoeba castellanii str. Neff	14923704
ACA1_149140	mRNA	ACA1_149140	NW_004457638.1	81759	83569	D	ACA1_149140	join(<81759..81809,81914..82038,82238..82386,82472..82557,82672..82798,82912..83409,83529..>83569)	Acanthamoeba castellanii str. Neff	14923705
ACA1_149150	mRNA	ACA1_149150	NW_004457638.1	83675	84852	R	ACA1_149150	complement(join(<83675..83858,83929..84401,84673..>84852))	Acanthamoeba castellanii str. Neff	14923706
ACA1_149160	mRNA	ACA1_149160	NW_004457638.1	86035	87816	D	ACA1_149160	join(<86035..86094,86329..86627,86703..86832,86962..87012,87164..87247,87362..87536,87653..>87816)	Acanthamoeba castellanii str. Neff	14923707
ACA1_149170	mRNA	ACA1_149170	NW_004457638.1	89982	90878	D	ACA1_149170	join(<89982..90057,90580..90726,90802..>90878)	Acanthamoeba castellanii str. Neff	14923708
ACA1_149180	mRNA	ACA1_149180	NW_004457638.1	91262	92617	D	ACA1_149180	join(<91262..91393,91472..91556,91655..91860,91955..92097,92218..92294,92400..>92617)	Acanthamoeba castellanii str. Neff	14923709
ACA1_149190	mRNA	ACA1_149190	NW_004457638.1	92684	94266	D	ACA1_149190	join(<92684..92840,93057..93136,93299..93384,93520..93584,93687..93771,93879..94027,94139..>94266)	Acanthamoeba castellanii str. Neff	14923710
ACA1_149200	mRNA	ACA1_149200	NW_004457638.1	94563	96778	D	ACA1_149200	join(<94563..94706,94802..94963,94978..95053,95125..95192,95292..95499,95571..95688,95791..95924,96011..96099,96230..96286,96369..96521,96611..>96778)	Acanthamoeba castellanii str. Neff	14923711
ACA1_149210	mRNA	ACA1_149210	NW_004457638.1	96956	100896	R	ACA1_149210	complement(join(<96956..97054,97093..97145,97247..97646,97681..98277,98387..99058,99178..99334,99416..99574,99725..99981,100071..100172,100320..100403,100516..>100896))	Acanthamoeba castellanii str. Neff	14923712
ACA1_149220	mRNA	ACA1_149220	NW_004457638.1	101330	101903	D	ACA1_149220	join(<101330..101460,101621..>101903)	Acanthamoeba castellanii str. Neff	14923713
ACA1_149230	mRNA	ACA1_149230	NW_004457638.1	102009	103305	R	ACA1_149230	complement(join(<102009..102250,102375..102433,102570..102670,102786..102917,103039..103145,103236..>103305))	Acanthamoeba castellanii str. Neff	14923714
ACA1_149240	mRNA	ACA1_149240	NW_004457638.1	103949	111284	D	ACA1_149240	join(<103949..104116,104242..104401,104548..104608,104751..104854,105010..105279,105395..105472,105543..105605,105750..105868,106003..106080,106181..106254,106387..106453,106625..106723,106799..107022,107177..107255,107341..107428,107531..107692,107807..107924,108050..108139,108250..108373,108533..108646,108754..108840,108980..109083,109165..109238,109365..109506,109615..109739,109855..110141,110245..110319,110415..110502,110594..110725,110834..110985,111111..>111284)	Acanthamoeba castellanii str. Neff	14923715
ACA1_149250	mRNA	ACA1_149250	NW_004457638.1	111505	112231	D	ACA1_149250	join(<111505..111895,111975..112011,112114..>112231)	Acanthamoeba castellanii str. Neff	14923716
ACA1_149260	mRNA	ACA1_149260	NW_004457638.1	112409	113191	R	ACA1_149260	complement(join(<112409..112551,112723..112989,113119..>113191))	Acanthamoeba castellanii str. Neff	14923717
ACA1_149270	mRNA	ACA1_149270	NW_004457638.1	115415	117208	D	ACA1_149270	<115415..>117208	Acanthamoeba castellanii str. Neff	14923718
ACA1_149280	mRNA	ACA1_149280	NW_004457638.1	118041	118487	D	ACA1_149280	join(<118041..118358,118473..>118487)	Acanthamoeba castellanii str. Neff	14923719
ACA1_149290	mRNA	ACA1_149290	NW_004457638.1	119876	122911	D	ACA1_149290	join(<119876..120391,120442..120720,120736..120829,121278..121425,121521..121646,121732..121835,121957..122129,122208..122339,122420..122519,122607..>122911)	Acanthamoeba castellanii str. Neff	14923720
ACA1_149300	mRNA	ACA1_149300	NW_004457638.1	123308	124678	R	ACA1_149300	complement(join(<123308..123451,123535..123767,123846..123972,124100..124192,124298..124394,124476..>124678))	Acanthamoeba castellanii str. Neff	14923721
ACA1_149310	mRNA	ACA1_149310	NW_004457638.1	125150	125578	R	ACA1_149310	complement(<125150..>125578)	Acanthamoeba castellanii str. Neff	14923722
ACA1_149320	mRNA	ACA1_149320	NW_004457638.1	125863	129554	D	ACA1_149320	join(<125863..126075,126169..126632,126738..126819,126965..127066,127208..127285,127372..127927,128018..128100,128227..128313,128429..128917,129082..129202,129292..129305,129381..>129554)	Acanthamoeba castellanii str. Neff	14923723
ACA1_149330	mRNA	ACA1_149330	NW_004457638.1	129670	130789	R	ACA1_149330	complement(join(<129670..130027,130110..>130789))	Acanthamoeba castellanii str. Neff	14923724
ACA1_149340	mRNA	ACA1_149340	NW_004457638.1	132080	132685	D	ACA1_149340	join(<132080..132195,132284..132312,132396..>132685)	Acanthamoeba castellanii str. Neff	14923725
ACA1_149350	mRNA	ACA1_149350	NW_004457638.1	132750	134326	D	ACA1_149350	join(<132750..132834,132920..133109,133196..133266,133364..133588,133683..133804,133910..134046,134095..>134326)	Acanthamoeba castellanii str. Neff	14923726
ACA1_149360	mRNA	ACA1_149360	NW_004457638.1	134397	135465	D	ACA1_149360	join(<134397..134757,134856..134932,135003..135084,135190..135267,135362..>135465)	Acanthamoeba castellanii str. Neff	14923727
ACA1_149370	mRNA	ACA1_149370	NW_004457638.1	135944	136906	R	ACA1_149370	complement(<135944..>136906)	Acanthamoeba castellanii str. Neff	14923728
ACA1_149380	mRNA	ACA1_149380	NW_004457638.1	138043	139242	D	ACA1_149380	join(<138043..138329,138434..138554,138662..138785,138887..139069,139181..>139242)	Acanthamoeba castellanii str. Neff	14923729
ACA1_149390	mRNA	ACA1_149390	NW_004457638.1	139296	141929	R	ACA1_149390	complement(join(<139296..139371,139474..139633,139690..139908,139996..140157,140241..140387,140469..140590,140733..140992,141136..141250,141341..141457,141601..141704,141771..>141929))	Acanthamoeba castellanii str. Neff	14923730
ACA1_149400	mRNA	ACA1_149400	NW_004457638.1	142351	144098	D	ACA1_149400	join(<142351..142389,142470..142749,142894..143856,143992..>144098)	Acanthamoeba castellanii str. Neff	14923731
ACA1_149410	mRNA	ACA1_149410	NW_004457638.1	144338	148351	D	ACA1_149410	join(<144338..144446,144525..144654,144757..144991,145104..145265,145398..145560,145666..145848,145990..146187,146352..146648,146706..147065,147174..147302,147399..147591,147679..147881,147970..148119,148215..>148351)	Acanthamoeba castellanii str. Neff	14923732
ACA1_149420	mRNA	ACA1_149420	NW_004457638.1	148546	149838	R	ACA1_149420	complement(join(<148546..148731,148833..149061,149185..149243,149370..149623,149811..>149838))	Acanthamoeba castellanii str. Neff	14923733
ACA1_149430	mRNA	ACA1_149430	NW_004457638.1	150352	152096	D	ACA1_149430	join(<150352..150971,151093..151478,151584..151656,151834..151936,152040..>152096)	Acanthamoeba castellanii str. Neff	14923734
ACA1_149440	mRNA	ACA1_149440	NW_004457638.1	152635	154008	D	ACA1_149440	join(<152635..152889,152981..153281,153379..153641,153750..153777,153812..>154008)	Acanthamoeba castellanii str. Neff	14923735
ACA1_149450	mRNA	ACA1_149450	NW_004457638.1	154256	155742	R	ACA1_149450	complement(join(<154256..154480,154686..154883,155067..155222,155341..>155742))	Acanthamoeba castellanii str. Neff	14923736
ACA1_149460	mRNA	ACA1_149460	NW_004457638.1	155879	156428	D	ACA1_149460	join(<155879..156026,156088..156203,156285..>156428)	Acanthamoeba castellanii str. Neff	14923737
ACA1_149470	mRNA	ACA1_149470	NW_004457638.1	156675	157221	D	ACA1_149470	join(<156675..156696,156824..>157221)	Acanthamoeba castellanii str. Neff	14923738
ACA1_149480	mRNA	ACA1_149480	NW_004457638.1	157578	159285	D	ACA1_149480	join(<157578..157984,157995..158038,158285..>159285)	Acanthamoeba castellanii str. Neff	14923739
ACA1_149490	mRNA	ACA1_149490	NW_004457638.1	159492	160791	D	ACA1_149490	join(<159492..159621,159771..160054,160272..160416,160595..>160791)	Acanthamoeba castellanii str. Neff	14923740
ACA1_149500	mRNA	ACA1_149500	NW_004457638.1	160941	162695	R	ACA1_149500	complement(join(<160941..161058,161219..161323,161461..161560,161691..161816,161958..162012,162187..162234,162384..162529,162626..>162695))	Acanthamoeba castellanii str. Neff	14923741
ACA1_149510	mRNA	ACA1_149510	NW_004457638.1	162951	168856	D	ACA1_149510	join(<162951..162987,163074..163136,163237..163506,163739..163926,164200..164309,164398..164536,164661..164736,164877..165052,165180..165562,165694..165732,165852..165873,166115..166364,166574..166693,166878..166997,167401..167558,167800..167871,167964..168064,168235..168298,168500..168659,168708..>168856)	Acanthamoeba castellanii str. Neff	14923742
ACA1_149520	mRNA	ACA1_149520	NW_004457638.1	169021	171741	D	ACA1_149520	join(<169021..169384,169761..170470,170636..171394,171547..>171741)	Acanthamoeba castellanii str. Neff	14923743
ACA1_149530	mRNA	ACA1_149530	NW_004457638.1	172551	176557	R	ACA1_149530	complement(join(<172551..173317,173445..173708,173879..173966,174127..174140,174173..174250,174536..174962,175192..175877,176068..176214,176309..176376,176487..>176557))	Acanthamoeba castellanii str. Neff	14923744
ACA1_149540	mRNA	ACA1_149540	NW_004457638.1	176869	177821	D	ACA1_149540	join(<176869..176960,177058..177138,177212..177339,177419..177600,177672..>177821)	Acanthamoeba castellanii str. Neff	14923745
ACA1_149550	mRNA	ACA1_149550	NW_004457638.1	180383	187483	R	ACA1_149550	complement(join(<180383..180900,181265..181455,181708..181804,182110..182199,182512..183189,183351..183441,183613..183675,183787..183865,184085..184146,184393..184458,184566..184664,184822..184872,184989..185235,185461..185533,185755..185883,186016..186122,186299..186396,186804..186905,187035..187166,187463..>187483))	Acanthamoeba castellanii str. Neff	14923746
ACA1_149760	mRNA	ACA1_149760	NW_004457638.1	189012	189766	R	ACA1_149760	complement(join(<189012..189176,189683..>189766))	Acanthamoeba castellanii str. Neff	14923747
ACA1_149770	mRNA	ACA1_149770	NW_004457638.1	192901	193936	R	ACA1_149770	complement(join(<192901..192943,193338..193423,193566..193639,193810..>193936))	Acanthamoeba castellanii str. Neff	14923748
ACA1_149780	mRNA	ACA1_149780	NW_004457638.1	197069	197215	D	ACA1_149780	<197069..>197215	Acanthamoeba castellanii str. Neff	14923749
ACA1_149790	mRNA	ACA1_149790	NW_004457638.1	199265	199696	R	ACA1_149790	complement(join(<199265..199330,199354..199571,199621..199661,199689..>199696))	Acanthamoeba castellanii str. Neff	14923750
ACA1_149800	mRNA	ACA1_149800	NW_004457638.1	203274	205313	R	ACA1_149800	complement(join(<203274..203681,203790..203958,204073..204250,204324..204444,204538..204642,204766..204884,204967..205030,205131..>205313))	Acanthamoeba castellanii str. Neff	14923751
ACA1_149810	mRNA	ACA1_149810	NW_004457638.1	206258	209603	D	ACA1_149810	join(<206258..206394,206479..206595,206673..206728,206787..206892,206983..207091,207181..207231,207326..207429,207519..207572,207678..207773,207853..208798,208890..209067,209164..209348,209451..>209603)	Acanthamoeba castellanii str. Neff	14923752
ACA1_149820	mRNA	ACA1_149820	NW_004457638.1	209776	210390	R	ACA1_149820	complement(join(<209776..209916,210120..210280,210336..>210390))	Acanthamoeba castellanii str. Neff	14923753
ACA1_149830	mRNA	ACA1_149830	NW_004457638.1	210602	212250	D	ACA1_149830	join(<210602..210744,210810..210846,210979..211054,211136..211181,211248..211357,211470..211611,211708..211820,211939..211984,212133..>212250)	Acanthamoeba castellanii str. Neff	14923754
ACA1_149840	mRNA	ACA1_149840	NW_004457638.1	213299	214761	R	ACA1_149840	complement(join(<213299..213342,213378..213455,213763..213820,213927..214039,214180..214244,214380..214527,214677..>214761))	Acanthamoeba castellanii str. Neff	14923755
ACA1_149850	mRNA	ACA1_149850	NW_004457638.1	214866	217602	R	ACA1_149850	complement(join(<214866..214905,214921..215033,215206..215345,215466..215526,215550..215927,216006..216196,216358..216414,216695..217240,217342..217477,217519..>217602))	Acanthamoeba castellanii str. Neff	14923756
ACA1_149870	mRNA	ACA1_149870	NW_004457638.1	222202	226101	D	ACA1_149870	join(<222202..222309,222613..222897,223161..223254,223376..223461,223581..223603,223774..223960,224070..224528,224717..224851,224958..225097,225201..225582,225730..225923,226026..>226101)	Acanthamoeba castellanii str. Neff	14923758
ACA1_149880	mRNA	ACA1_149880	NW_004457638.1	226303	227661	D	ACA1_149880	join(<226303..226482,226631..226870,226967..227059,227164..227358,227497..>227661)	Acanthamoeba castellanii str. Neff	14923759
ACA1_149890	mRNA	ACA1_149890	NW_004457638.1	227927	228694	R	ACA1_149890	complement(join(<227927..228070,228142..228550,228651..>228694))	Acanthamoeba castellanii str. Neff	14923760
ACA1_149900	mRNA	ACA1_149900	NW_004457638.1	229437	234959	D	ACA1_149900	join(<229437..229517,229595..229780,229857..230068,230140..230287,230361..230632,230719..231202,231288..231560,231619..231774,231860..232003,232120..232540,232661..232833,232920..233159,233269..233319,233406..233526,233608..233723,233821..233878,233979..234094,234222..>234959)	Acanthamoeba castellanii str. Neff	14923761
ACA1_149910	mRNA	ACA1_149910	NW_004457638.1	235125	237662	D	ACA1_149910	join(<235125..235530,235693..235718,235738..236091,236188..236436,236557..236655,236749..236861,236984..237125,237246..237420,237439..>237662)	Acanthamoeba castellanii str. Neff	14923762
ACA1_149930	mRNA	ACA1_149930	NW_004457638.1	241111	247086	R	ACA1_149930	complement(join(<241111..241317,241402..241665,241806..241933,242002..242207,242284..242452,242533..242677,242764..242904,242982..243098,243185..243302,243370..243445,243541..243873,243968..244060,244173..244329,244410..244499,244606..244844,244976..245084,245207..245299,245396..245927,246003..246168,246274..246387,246574..246627,246720..>247086))	Acanthamoeba castellanii str. Neff	14923764
ACA1_149940	mRNA	ACA1_149940	NW_004457638.1	247285	249109	D	ACA1_149940	join(<247285..247547,247627..247744,247908..248097,248199..248350,248437..248620,248705..248821,248889..>249109)	Acanthamoeba castellanii str. Neff	14923765
ACA1_149950	mRNA	ACA1_149950	NW_004457638.1	249230	250736	R	ACA1_149950	complement(join(<249230..249433,249537..249617,249732..249791,249900..250220,250326..250418,250534..250614,250701..>250736))	Acanthamoeba castellanii str. Neff	14923766
ACA1_149960	mRNA	ACA1_149960	NW_004457638.1	251342	257878	D	ACA1_149960	join(<251342..251486,251575..251685,251989..252153,252236..252402,252555..252815,252849..252903,253274..253824,253961..254092,254252..254387,254504..254568,254712..254780,254910..255057,255152..255741,255842..256060,256185..257064,257190..257279,257398..257816,257840..>257878)	Acanthamoeba castellanii str. Neff	14923767
ACA1_149970	mRNA	ACA1_149970	NW_004457638.1	257939	260943	D	ACA1_149970	join(<257939..258506,258629..258716,258899..258984,259082..259266,259382..259715,259814..259943,260067..260170,260237..260295,260419..260499,260573..260634,260716..260806,260902..>260943)	Acanthamoeba castellanii str. Neff	14923768
ACA1_149980	mRNA	ACA1_149980	NW_004457638.1	261024	263950	R	ACA1_149980	complement(join(<261024..261236,261349..261522,261626..261687,261753..261916,262039..262281,262367..262440,262557..262630,262730..262884,262969..263055,263159..263227,263396..263483,263593..>263950))	Acanthamoeba castellanii str. Neff	14923769
ACA1_149990	mRNA	ACA1_149990	NW_004457638.1	264135	264578	R	ACA1_149990	complement(<264135..>264578)	Acanthamoeba castellanii str. Neff	14923770
ACA1_150000	mRNA	ACA1_150000	NW_004457638.1	264902	268422	R	ACA1_150000	complement(join(<264902..265044,265107..265170,265243..265357,265433..265479,265683..265756,265831..266012,266227..266273,266483..266533,266631..266714,266747..266833,266928..267046,267155..267315,267426..267536,267618..267757,267855..267944,268016..268053,268144..268243,268360..>268422))	Acanthamoeba castellanii str. Neff	14923771
ACA1_150010	mRNA	ACA1_150010	NW_004457638.1	268693	272469	R	ACA1_150010	complement(join(<268693..268777,268859..268943,269070..269166,269265..269432,269495..269569,269651..269716,269867..269971,270046..270121,270228..270419,270550..270717,270805..271023,271109..271160,271259..271318,271455..271613,271719..271830,271921..272004,272111..272203,272320..>272469))	Acanthamoeba castellanii str. Neff	14923772
ACA1_150020	mRNA	ACA1_150020	NW_004457638.1	273089	273615	R	ACA1_150020	complement(join(<273089..273251,273344..>273615))	Acanthamoeba castellanii str. Neff	14923773
ACA1_150030	mRNA	ACA1_150030	NW_004457638.1	274017	274623	R	ACA1_150030	complement(join(<274017..274077,274164..274266,274365..>274623))	Acanthamoeba castellanii str. Neff	14923774
ACA1_150040	mRNA	ACA1_150040	NW_004457638.1	275081	276648	D	ACA1_150040	join(<275081..275698,275834..276592,276607..>276648)	Acanthamoeba castellanii str. Neff	14923775
ACA1_150050	mRNA	ACA1_150050	NW_004457638.1	277187	279428	D	ACA1_150050	join(<277187..277296,277362..277407,277487..277576,277691..277856,278160..278277,278423..278586,278682..278754,278830..278965,279044..279188,279304..>279428)	Acanthamoeba castellanii str. Neff	14923776
ACA1_150060	mRNA	ACA1_150060	NW_004457638.1	279542	281734	R	ACA1_150060	complement(join(<279542..279697,279805..279932,280019..280181,280256..280314,280440..280601,280702..280783,280852..280940,281035..281150,281239..281314,281393..281491,281704..>281734))	Acanthamoeba castellanii str. Neff	14923777
ACA1_150070	mRNA	ACA1_150070	NW_004457638.1	282688	284192	R	ACA1_150070	complement(join(<282688..282954,283123..283607,283799..>284192))	Acanthamoeba castellanii str. Neff	14923778
ACA1_150090	mRNA	ACA1_150090	NW_004457638.1	285830	286839	D	ACA1_150090	join(<285830..285868,285925..286003,286114..286143,286209..286262,286371..286463,286568..286638,286723..>286839)	Acanthamoeba castellanii str. Neff	14923780
ACA1_150100	mRNA	ACA1_150100	NW_004457638.1	286952	287359	R	ACA1_150100	complement(<286952..>287359)	Acanthamoeba castellanii str. Neff	14923781
ACA1_339120	mRNA	ACA1_339120	NW_004457636.1	93	1175	R	ACA1_339120	complement(join(<93..330,517..678,766..903,1042..>1175))	Acanthamoeba castellanii str. Neff	14923675
ACA1_339230	mRNA	ACA1_339230	NW_004457636.1	2877	3520	D	ACA1_339230	join(<2877..3293,3407..>3520)	Acanthamoeba castellanii str. Neff	14923674
ACA1_339340	mRNA	ACA1_339340	NW_004457636.1	4088	5351	D	ACA1_339340	join(<4088..4366,4469..4560,4989..5211,5235..>5351)	Acanthamoeba castellanii str. Neff	14923668
ACA1_339350	mRNA	ACA1_339350	NW_004457636.1	5462	6067	R	ACA1_339350	complement(join(<5462..5774,5869..6028,6043..>6067))	Acanthamoeba castellanii str. Neff	14923669
ACA1_339360	mRNA	ACA1_339360	NW_004457636.1	9687	10366	R	ACA1_339360	complement(join(<9687..9808,9886..>10366))	Acanthamoeba castellanii str. Neff	14923670
ACA1_339370	mRNA	ACA1_339370	NW_004457636.1	11687	11981	D	ACA1_339370	join(<11687..11879,11956..>11981)	Acanthamoeba castellanii str. Neff	14923671
ACA1_339380	mRNA	ACA1_339380	NW_004457636.1	12539	13740	D	ACA1_339380	join(<12539..13162,13302..13333,13374..>13740)	Acanthamoeba castellanii str. Neff	14923672
ACA1_339390	mRNA	ACA1_339390	NW_004457636.1	13833	16269	R	ACA1_339390	complement(join(<13833..14014,14166..14311,15918..15982,16099..>16269))	Acanthamoeba castellanii str. Neff	14923673
ACA1_299930	mRNA	ACA1_299930	NW_004457634.1	2491	2920	D	ACA1_299930	join(<2491..2542,2648..2717,2769..2781,2858..>2920)	Acanthamoeba castellanii str. Neff	14923667
ACA1_300040	mRNA	ACA1_300040	NW_004457634.1	6400	8756	D	ACA1_300040	join(<6400..6407,6456..6594,6943..7014,7041..7122,7228..7446,7503..7978,8748..>8756)	Acanthamoeba castellanii str. Neff	14923665
ACA1_300250	mRNA	ACA1_300250	NW_004457634.1	9957	11070	D	ACA1_300250	join(<9957..10020,10148..10224,10285..10533,10599..10801,10862..10959,11036..>11070)	Acanthamoeba castellanii str. Neff	14923666
ACA1_109460	mRNA	ACA1_109460	NW_004457633.1	266	772	D	ACA1_109460	join(<266..325,386..>772)	Acanthamoeba castellanii str. Neff	14923664
ACA1_109470	mRNA	ACA1_109470	NW_004457633.1	1238	2454	D	ACA1_109470	join(<1238..1402,1512..1586,1735..1960,2363..>2454)	Acanthamoeba castellanii str. Neff	14923663
ACA1_109580	mRNA	ACA1_109580	NW_004457633.1	5226	5792	R	ACA1_109580	complement(join(<5226..5305,5533..5629,5721..>5792))	Acanthamoeba castellanii str. Neff	14923662
ACA1_109590	mRNA	ACA1_109590	NW_004457633.1	7325	7907	D	ACA1_109590	join(<7325..7358,7489..7634,7797..>7907)	Acanthamoeba castellanii str. Neff	14923661
ACA1_080050	mRNA	ACA1_080050	NW_004457632.1	188	5591	D	ACA1_080050	join(<188..326,493..581,655..4826,4943..>5591)	Acanthamoeba castellanii str. Neff	14923660
ACA1_080060	mRNA	ACA1_080060	NW_004457632.1	5799	7834	D	ACA1_080060	join(<5799..6011,6137..6230,6330..6415,6532..6748,6870..6965,7033..7106,7230..7290,7381..7476,7544..7618,7710..>7834)	Acanthamoeba castellanii str. Neff	14923603
ACA1_080070	mRNA	ACA1_080070	NW_004457632.1	8095	12418	D	ACA1_080070	join(<8095..8167,8286..8455,8524..8641,8705..8892,8986..9094,9192..9390,9681..9726,9748..9795,10005..10087,10188..10285,10352..10477,10561..10690,10788..10897,10996..11223,11300..11419,11522..11626,11679..11760,11783..11937,12025..12198,12286..>12418)	Acanthamoeba castellanii str. Neff	14923629
ACA1_080180	mRNA	ACA1_080180	NW_004457632.1	13318	14653	R	ACA1_080180	complement(join(<13318..13773,13847..13933,14070..14156,14235..14312,14579..>14653))	Acanthamoeba castellanii str. Neff	14923630
ACA1_080290	mRNA	ACA1_080290	NW_004457632.1	15168	16829	R	ACA1_080290	complement(join(<15168..15408,15511..15856,15917..15959,16369..16509,16600..16648,16750..>16829))	Acanthamoeba castellanii str. Neff	14923631
ACA1_080400	mRNA	ACA1_080400	NW_004457632.1	17182	18574	R	ACA1_080400	complement(join(<17182..17379,17455..17586,17670..17873,18035..>18574))	Acanthamoeba castellanii str. Neff	14923632
ACA1_080410	mRNA	ACA1_080410	NW_004457632.1	18869	20488	R	ACA1_080410	complement(join(<18869..18985,19082..19225,19625..19762,19837..19946,20030..20131,20215..>20488))	Acanthamoeba castellanii str. Neff	14923633
ACA1_080520	mRNA	ACA1_080520	NW_004457632.1	20728	21934	R	ACA1_080520	complement(join(<20728..20861,20984..21134,21175..21420,21520..21744,21845..>21934))	Acanthamoeba castellanii str. Neff	14923634
ACA1_080530	mRNA	ACA1_080530	NW_004457632.1	22753	26094	D	ACA1_080530	join(<22753..22780,22860..23009,23104..23199,23320..23391,23457..23573,23657..23779,23862..23952,24034..24110,24151..24230,24288..24543,24656..24734,24818..24858,24929..25057,25182..25290,25404..25533,25622..25710,25798..26021,26084..>26094)	Acanthamoeba castellanii str. Neff	14923635
ACA1_080540	mRNA	ACA1_080540	NW_004457632.1	26619	29762	D	ACA1_080540	join(<26619..26828,26973..27012,27105..27128,27226..27292,27495..27510,27527..27652,27836..28000,28122..28331,28429..28565,28641..28783,28879..28951,29054..>29762)	Acanthamoeba castellanii str. Neff	14923636
ACA1_080550	mRNA	ACA1_080550	NW_004457632.1	30186	32957	D	ACA1_080550	join(<30186..30305,30393..30539,30658..30788,30880..31098,31181..31312,31392..31513,31573..31865,31956..32121,32210..32296,32380..32435,32525..32715,32819..>32957)	Acanthamoeba castellanii str. Neff	14923637
ACA1_080570	mRNA	ACA1_080570	NW_004457632.1	35420	37575	R	ACA1_080570	complement(join(<35420..35788,35915..36654,36760..36927,37080..37332,37399..>37575))	Acanthamoeba castellanii str. Neff	14923604
ACA1_080580	mRNA	ACA1_080580	NW_004457632.1	38328	39558	D	ACA1_080580	join(<38328..38681,38764..38909,39046..39260,39371..>39558)	Acanthamoeba castellanii str. Neff	14923605
ACA1_080590	mRNA	ACA1_080590	NW_004457632.1	40442	45046	D	ACA1_080590	join(<40442..40835,41128..41297,41412..41684,41810..41871,41969..42249,42407..42529,42627..42731,42847..42991,43096..43315,43472..43670,43796..43964,44038..44112,44200..44266,44346..44650,44731..44867,44961..>45046)	Acanthamoeba castellanii str. Neff	14923606
ACA1_080610	mRNA	ACA1_080610	NW_004457632.1	47653	49455	R	ACA1_080610	complement(join(<47653..47809,47886..48133,48341..48575,48711..48790,48886..>49455))	Acanthamoeba castellanii str. Neff	14923608
ACA1_080620	mRNA	ACA1_080620	NW_004457632.1	49356	49729	D	ACA1_080620	join(<49356..49526,49616..>49729)	Acanthamoeba castellanii str. Neff	14923610
ACA1_080630	mRNA	ACA1_080630	NW_004457632.1	50055	51546	D	ACA1_080630	join(<50055..50159,50224..50359,50421..50492,50573..>51546)	Acanthamoeba castellanii str. Neff	14923609
ACA1_080640	mRNA	ACA1_080640	NW_004457632.1	52114	53028	R	ACA1_080640	complement(join(<52114..52173,52312..>53028))	Acanthamoeba castellanii str. Neff	14923611
ACA1_080650	mRNA	ACA1_080650	NW_004457632.1	53515	56561	D	ACA1_080650	join(<53515..53551,53575..53805,53886..53985,54110..54518,54613..54742,54850..54935,55098..55265,55349..55432,55518..55596,55708..55761,55836..55957,56034..56126,56190..56322,56347..>56561)	Acanthamoeba castellanii str. Neff	14923612
ACA1_080660	mRNA	ACA1_080660	NW_004457632.1	56712	58040	D	ACA1_080660	join(<56712..56921,57061..57852,57939..>58040)	Acanthamoeba castellanii str. Neff	14923613
ACA1_080670	mRNA	ACA1_080670	NW_004457632.1	59287	60899	D	ACA1_080670	join(<59287..59938,60011..60100,60181..60269,60344..60451,60524..60682,60762..>60899)	Acanthamoeba castellanii str. Neff	14923614
ACA1_080680	mRNA	ACA1_080680	NW_004457632.1	61614	63559	D	ACA1_080680	join(<61614..61860,62075..62207,62290..62841,62939..63071,63179..>63559)	Acanthamoeba castellanii str. Neff	14923615
ACA1_080690	mRNA	ACA1_080690	NW_004457632.1	64413	64700	R	ACA1_080690	complement(<64413..>64700)	Acanthamoeba castellanii str. Neff	14923616
ACA1_080710	mRNA	ACA1_080710	NW_004457632.1	66191	66465	R	ACA1_080710	complement(join(<66191..66286,66337..>66465))	Acanthamoeba castellanii str. Neff	14923618
ACA1_080720	mRNA	ACA1_080720	NW_004457632.1	66920	67318	R	ACA1_080720	complement(<66920..>67318)	Acanthamoeba castellanii str. Neff	14923619
ACA1_080730	mRNA	ACA1_080730	NW_004457632.1	67691	70093	R	ACA1_080730	complement(join(<67691..68674,68774..69472,69557..>70093))	Acanthamoeba castellanii str. Neff	14923620
ACA1_080750	mRNA	ACA1_080750	NW_004457632.1	76203	76998	R	ACA1_080750	complement(join(<76203..76273,76361..76508,76642..76751,76869..>76998))	Acanthamoeba castellanii str. Neff	14923622
ACA1_080760	mRNA	ACA1_080760	NW_004457632.1	77215	78685	R	ACA1_080760	complement(join(<77215..77357,77469..77546,77619..77718,77822..77923,78018..78093,78174..78358,78459..78516,78597..>78685))	Acanthamoeba castellanii str. Neff	14923623
ACA1_080870	mRNA	ACA1_080870	NW_004457632.1	79425	80815	R	ACA1_080870	complement(join(<79425..79579,79643..79775,79899..80019,80092..80161,80238..80348,80425..80555,80643..>80815))	Acanthamoeba castellanii str. Neff	14923624
ACA1_080980	mRNA	ACA1_080980	NW_004457632.1	82768	85766	R	ACA1_080980	complement(join(<82768..82969,83060..83568,83660..83857,83927..84012,84076..84208,84351..84471,84540..84609,84662..84799,84876..85012,85094..85311,85410..>85766))	Acanthamoeba castellanii str. Neff	14923625
ACA1_081090	mRNA	ACA1_081090	NW_004457632.1	86534	86947	D	ACA1_081090	join(<86534..86553,86683..>86947)	Acanthamoeba castellanii str. Neff	14923626
ACA1_081100	mRNA	ACA1_081100	NW_004457632.1	89120	92325	R	ACA1_081100	complement(join(<89120..89285,89369..89465,89554..89623,89707..89798,89897..90239,90346..90457,90539..90630,90751..90986,91101..91206,91266..91706,91840..>92325))	Acanthamoeba castellanii str. Neff	14923627
ACA1_081420	mRNA	ACA1_081420	NW_004457632.1	106934	108297	D	ACA1_081420	join(<106934..106982,107059..107321,107462..107787,107872..108002,108104..>108297)	Acanthamoeba castellanii str. Neff	14923639
ACA1_081440	mRNA	ACA1_081440	NW_004457632.1	109565	110631	R	ACA1_081440	complement(join(<109565..109732,109844..109903,110007..110143,110230..110361,110457..>110631))	Acanthamoeba castellanii str. Neff	14923641
ACA1_081450	mRNA	ACA1_081450	NW_004457632.1	110871	111937	D	ACA1_081450	join(<110871..111060,111145..111298,111411..111507,111577..111670,111762..>111937)	Acanthamoeba castellanii str. Neff	14923642
ACA1_081460	mRNA	ACA1_081460	NW_004457632.1	112065	114514	R	ACA1_081460	complement(join(<112065..112417,112503..112698,112785..112924,113012..113155,113269..114279,114349..>114514))	Acanthamoeba castellanii str. Neff	14923643
ACA1_081470	mRNA	ACA1_081470	NW_004457632.1	114990	115762	D	ACA1_081470	join(<114990..115417,115521..115652,115684..>115762)	Acanthamoeba castellanii str. Neff	14923644
ACA1_081580	mRNA	ACA1_081580	NW_004457632.1	116166	117104	R	ACA1_081580	complement(join(<116166..116294,116450..116520,116610..116864,116963..>117104))	Acanthamoeba castellanii str. Neff	14923645
ACA1_081690	mRNA	ACA1_081690	NW_004457632.1	121048	121749	R	ACA1_081690	complement(join(<121048..121499,121564..121624,121708..>121749))	Acanthamoeba castellanii str. Neff	14923646
ACA1_081800	mRNA	ACA1_081800	NW_004457632.1	136701	137314	D	ACA1_081800	join(<136701..137036,137138..>137314)	Acanthamoeba castellanii str. Neff	14923647
ACA1_081810	mRNA	ACA1_081810	NW_004457632.1	137449	137909	R	ACA1_081810	complement(join(<137449..137719,137821..>137909))	Acanthamoeba castellanii str. Neff	14923648
ACA1_081820	mRNA	ACA1_081820	NW_004457632.1	138305	139555	R	ACA1_081820	complement(join(<138305..138546,138627..138801,138864..138986,139178..>139555))	Acanthamoeba castellanii str. Neff	14923649
ACA1_081830	mRNA	ACA1_081830	NW_004457632.1	139734	141092	D	ACA1_081830	join(<139734..139769,140151..140428,140528..>141092)	Acanthamoeba castellanii str. Neff	14923650
ACA1_081840	mRNA	ACA1_081840	NW_004457632.1	141182	144117	R	ACA1_081840	complement(join(<141182..141310,141466..141536,141618..141872,141962..142156,142299..142581,142652..142932,142973..143064,143166..143245,143332..143461,143562..143605,143721..143777,143849..143962,144030..144076,144102..>144117))	Acanthamoeba castellanii str. Neff	14923651
ACA1_081850	mRNA	ACA1_081850	NW_004457632.1	144314	150799	R	ACA1_081850	complement(join(<144314..144829,144935..145395,145472..145702,145855..146161,146240..146411,146530..146656,146761..146926,147035..147180,147256..147399,147500..147701,147786..147893,147987..148238,148345..148499,148596..148611,148632..148748,148820..149299,149411..149552,149627..149967,150046..150232,150318..150444,150589..>150799))	Acanthamoeba castellanii str. Neff	14923652
ACA1_081860	mRNA	ACA1_081860	NW_004457632.1	151129	151543	R	ACA1_081860	complement(join(<151129..151251,151337..>151543))	Acanthamoeba castellanii str. Neff	14923653
ACA1_081870	mRNA	ACA1_081870	NW_004457632.1	151784	152628	D	ACA1_081870	join(<151784..151831,151916..151975,152070..152198,152306..152409,152490..>152628)	Acanthamoeba castellanii str. Neff	14923654
ACA1_081880	mRNA	ACA1_081880	NW_004457632.1	154382	155566	D	ACA1_081880	join(<154382..154560,154626..154664,154743..154792,154866..154973,155111..155472,155561..>155566)	Acanthamoeba castellanii str. Neff	14923655
ACA1_081990	mRNA	ACA1_081990	NW_004457632.1	155742	156059	R	ACA1_081990	complement(join(<155742..155801,155907..>156059))	Acanthamoeba castellanii str. Neff	14923656
ACA1_082000	mRNA	ACA1_082000	NW_004457632.1	156292	156763	D	ACA1_082000	join(<156292..156342,156449..156533,156614..156687,156749..>156763)	Acanthamoeba castellanii str. Neff	14923657
ACA1_082010	mRNA	ACA1_082010	NW_004457632.1	156865	158945	D	ACA1_082010	join(<156865..157282,157382..157849,158035..158216,158297..158488,158577..158688,158911..>158945)	Acanthamoeba castellanii str. Neff	14923658
ACA1_082020	mRNA	ACA1_082020	NW_004457632.1	160077	160360	D	ACA1_082020	join(<160077..160258,160324..>160360)	Acanthamoeba castellanii str. Neff	14923659
ACA1_331580	mRNA	ACA1_331580	NW_004457631.1	1572	2219	R	ACA1_331580	complement(<1572..>2219)	Acanthamoeba castellanii str. Neff	14923602
ACA1_331590	mRNA	ACA1_331590	NW_004457631.1	2393	8571	D	ACA1_331590	join(<2393..2578,2643..2708,2829..2911,2987..3536,3609..3682,4005..4130,4491..4576,4659..4785,4877..5229,5361..5504,5640..5707,5844..6032,6186..6254,6362..6452,6528..6662,6843..7020,7163..7277,7721..7864,7966..8031,8144..8270,8345..>8571)	Acanthamoeba castellanii str. Neff	14923583
ACA1_331700	mRNA	ACA1_331700	NW_004457631.1	9522	13468	R	ACA1_331700	complement(join(<9522..9757,9842..11141,11214..11588,11728..11882,12000..12069,12137..>13468))	Acanthamoeba castellanii str. Neff	14923594
ACA1_331710	mRNA	ACA1_331710	NW_004457631.1	13822	14817	D	ACA1_331710	join(<13822..14237,14346..14540,14622..>14817)	Acanthamoeba castellanii str. Neff	14923584
ACA1_331720	mRNA	ACA1_331720	NW_004457631.1	15187	16167	R	ACA1_331720	complement(<15187..>16167)	Acanthamoeba castellanii str. Neff	14923585
ACA1_331730	mRNA	ACA1_331730	NW_004457631.1	16867	18791	D	ACA1_331730	join(<16867..17010,17275..17347,17424..17602,17694..17836,17923..18029,18131..18323,18433..18581,18697..>18791)	Acanthamoeba castellanii str. Neff	14923586
ACA1_331740	mRNA	ACA1_331740	NW_004457631.1	19241	19820	D	ACA1_331740	join(<19241..19362,19412..>19820)	Acanthamoeba castellanii str. Neff	14923587
ACA1_331750	mRNA	ACA1_331750	NW_004457631.1	20349	21809	R	ACA1_331750	complement(join(<20349..20487,20564..20706,20795..20869,21106..21185,21261..21517,21607..>21809))	Acanthamoeba castellanii str. Neff	14923588
ACA1_331760	mRNA	ACA1_331760	NW_004457631.1	22129	22717	R	ACA1_331760	complement(join(<22129..22182,22267..22501,22629..>22717))	Acanthamoeba castellanii str. Neff	14923589
ACA1_331770	mRNA	ACA1_331770	NW_004457631.1	22814	24191	R	ACA1_331770	complement(join(<22814..22852,22941..23172,23236..23995,24116..>24191))	Acanthamoeba castellanii str. Neff	14923590
ACA1_331780	mRNA	ACA1_331780	NW_004457631.1	24926	29319	R	ACA1_331780	complement(join(<24926..24973,25092..25199,25319..25399,25518..25584,25722..25874,25981..26134,26245..26338,26459..26527,26615..26691,26785..28029,28149..28371,28468..28572,28651..28699,28786..29098,29187..>29319))	Acanthamoeba castellanii str. Neff	14923591
ACA1_331790	mRNA	ACA1_331790	NW_004457631.1	29481	31513	D	ACA1_331790	join(<29481..29705,29823..29936,30080..30221,30308..30432,30542..30667,30785..30938,31037..31109,31191..31334,31429..>31513)	Acanthamoeba castellanii str. Neff	14923592
ACA1_331800	mRNA	ACA1_331800	NW_004457631.1	31743	34603	R	ACA1_331800	complement(join(<31743..32215,32364..32452,32562..32703,32795..32930,33089..33219,33351..33444,33575..33688,33815..33940,34062..34207,34303..>34603))	Acanthamoeba castellanii str. Neff	14923593
ACA1_331910	mRNA	ACA1_331910	NW_004457631.1	35135	36606	R	ACA1_331910	complement(join(<35135..35180,35286..35547,35681..35797,35914..36037,36157..36224,36315..>36606))	Acanthamoeba castellanii str. Neff	14923595
ACA1_331920	mRNA	ACA1_331920	NW_004457631.1	36837	37774	D	ACA1_331920	join(<36837..37055,37145..37181,37252..37352,37416..37530,37614..>37774)	Acanthamoeba castellanii str. Neff	14923596
ACA1_331930	mRNA	ACA1_331930	NW_004457631.1	37878	42094	R	ACA1_331930	complement(join(<37878..38200,38322..38409,38479..38562,38670..38969,39009..39190,39315..39415,39526..39656,39725..40738,40854..41003,41169..41296,41382..41423,41548..41691,41761..>42094))	Acanthamoeba castellanii str. Neff	14923597
ACA1_331950	mRNA	ACA1_331950	NW_004457631.1	49313	51203	R	ACA1_331950	complement(join(<49313..49668,49763..49867,50019..50094,50255..50340,50491..50597,50721..50840,50967..51018,51116..>51203))	Acanthamoeba castellanii str. Neff	14923599
ACA1_331960	mRNA	ACA1_331960	NW_004457631.1	51313	53904	R	ACA1_331960	complement(join(<51313..51400,51478..51538,51602..51707,51840..51964,52038..52210,52298..52416,52504..52652,52747..52934,53014..53430,53585..53781,53818..>53904))	Acanthamoeba castellanii str. Neff	14923600
ACA1_331970	mRNA	ACA1_331970	NW_004457631.1	54813	57490	D	ACA1_331970	join(<54813..54899,54910..55003,55088..55148,55269..55352,55427..55611,55773..55930,56017..56124,56218..56325,56414..56505,56602..56695,56779..56877,56967..57285,57348..>57490)	Acanthamoeba castellanii str. Neff	14923601
ACA1_090530	mRNA	ACA1_090530	NW_004457630.1	3726	4348	R	ACA1_090530	complement(join(<3726..4049,4178..>4348))	Acanthamoeba castellanii str. Neff	14923582
ACA1_010150	mRNA	ACA1_010150	NW_004457629.1	251	1529	R	ACA1_010150	complement(join(<251..399,502..553,637..731,871..951,1035..1156,1273..>1529))	Acanthamoeba castellanii str. Neff	14923578
ACA1_010160	mRNA	ACA1_010160	NW_004457629.1	1660	4556	R	ACA1_010160	complement(join(<1660..1822,1942..2080,2177..2455,2545..2620,2714..2871,2972..3212,3369..3620,3701..3792,3869..3967,4056..4114,4204..>4556))	Acanthamoeba castellanii str. Neff	14923579
ACA1_010170	mRNA	ACA1_010170	NW_004457629.1	4974	6229	R	ACA1_010170	complement(join(<4974..5307,5389..5543,5651..5797,5961..6130,6193..>6229))	Acanthamoeba castellanii str. Neff	14923575
ACA1_010180	mRNA	ACA1_010180	NW_004457629.1	6696	7899	D	ACA1_010180	join(<6696..6852,6924..7002,7084..7166,7255..7463,7530..7664,7747..>7899)	Acanthamoeba castellanii str. Neff	14923576
ACA1_010190	mRNA	ACA1_010190	NW_004457629.1	8105	13017	D	ACA1_010190	join(<8105..8257,8406..8728,8826..9952,10023..10136,10212..10550,10623..10751,10832..10845,10945..11035,11120..11174,11268..11406,11493..11556,11673..11689,11761..11822,11915..11988,12138..12217,12289..12402,12506..12583,12666..12761,12886..>13017)	Acanthamoeba castellanii str. Neff	14923577
ACA1_323830	mRNA	ACA1_323830	NW_004457628.1	7838	9015	D	ACA1_323830	join(<7838..8151,8473..8613,8694..8839,8924..>9015)	Acanthamoeba castellanii str. Neff	14923574
ACA1_324040	mRNA	ACA1_324040	NW_004457628.1	12017	13386	R	ACA1_324040	complement(join(<12017..12238,12323..12485,12566..12704,12774..12975,13049..13097,13163..>13386))	Acanthamoeba castellanii str. Neff	14923571
ACA1_324050	mRNA	ACA1_324050	NW_004457628.1	13688	18665	D	ACA1_324050	join(<13688..13850,13917..14029,14145..14244,14313..14497,14576..14678,14743..15136,15228..15656,15712..15782,15845..15926,15990..16149,16219..16284,16342..16509,16603..16770,16829..16895,16977..17163,17235..17571,17667..18202,18291..18399,18600..>18665)	Acanthamoeba castellanii str. Neff	14923569
ACA1_324060	mRNA	ACA1_324060	NW_004457628.1	18967	19982	D	ACA1_324060	join(<18967..19439,19502..>19982)	Acanthamoeba castellanii str. Neff	14923572
ACA1_324170	mRNA	ACA1_324170	NW_004457628.1	20334	21095	D	ACA1_324170	join(<20334..20370,20438..20574,20648..20794,20882..21049,21087..>21095)	Acanthamoeba castellanii str. Neff	14923573
ACA1_034290	mRNA	ACA1_034290	NW_004457626.1	3516	5213	D	ACA1_034290	join(<3516..3561,3693..3841,3948..4183,4392..4480,4673..4787,4898..>5213)	Acanthamoeba castellanii str. Neff	14923542
ACA1_034300	mRNA	ACA1_034300	NW_004457626.1	5439	7052	D	ACA1_034300	join(<5439..5542,5604..5750,5815..5969,6046..6293,6411..6500,6561..6639,6750..6907,7005..>7052)	Acanthamoeba castellanii str. Neff	14923543
ACA1_034330	mRNA	ACA1_034330	NW_004457626.1	17005	19991	D	ACA1_034330	join(<17005..17031,17149..17382,17458..17515,17586..17726,17857..17957,18055..18148,18233..18342,18427..18481,18600..18880,18967..19025,19347..19414,19427..19550,19653..19782,19860..>19991)	Acanthamoeba castellanii str. Neff	14923556
ACA1_034340	mRNA	ACA1_034340	NW_004457626.1	20570	20870	D	ACA1_034340	join(<20570..20673,20774..>20870)	Acanthamoeba castellanii str. Neff	14923557
ACA1_034460	mRNA	ACA1_034460	NW_004457626.1	42608	43341	D	ACA1_034460	join(<42608..42840,42946..43140,43221..>43341)	Acanthamoeba castellanii str. Neff	14923559
ACA1_034470	mRNA	ACA1_034470	NW_004457626.1	43450	44310	R	ACA1_034470	complement(<43450..>44310)	Acanthamoeba castellanii str. Neff	14923560
ACA1_034480	mRNA	ACA1_034480	NW_004457626.1	48224	55929	D	ACA1_034480	join(<48224..48585,48686..48785,48848..48908,49021..49270,49347..49439,49543..49680,49855..50136,50229..50313,50403..50704,50755..50939,51033..51164,51267..51338,51434..51900,51997..52117,52202..52521,52605..52737,52870..53002,53019..53060,53113..53294,53392..53520,53642..53832,53924..54104,54183..54291,54399..54551,54680..55054,55127..55373,55456..55689,55778..55899,55923..>55929)	Acanthamoeba castellanii str. Neff	14923561
ACA1_034490	mRNA	ACA1_034490	NW_004457626.1	56337	57108	R	ACA1_034490	complement(join(<56337..56451,56610..56739,56820..>57108))	Acanthamoeba castellanii str. Neff	14923562
ACA1_034500	mRNA	ACA1_034500	NW_004457626.1	57305	58122	R	ACA1_034500	complement(join(<57305..57432,57539..57674,57707..57783,57864..>58122))	Acanthamoeba castellanii str. Neff	14923563
ACA1_034510	mRNA	ACA1_034510	NW_004457626.1	59170	59965	D	ACA1_034510	join(<59170..59266,59347..59467,59540..59811,59874..>59965)	Acanthamoeba castellanii str. Neff	14923564
ACA1_034520	mRNA	ACA1_034520	NW_004457626.1	60683	63595	D	ACA1_034520	join(<60683..60844,61007..61110,61262..61413,61545..61706,61828..61974,62055..62156,62253..62420,62503..62592,62687..62748,62823..62929,63003..63076,63164..63273,63369..63422,63500..>63595)	Acanthamoeba castellanii str. Neff	14923565
ACA1_034530	mRNA	ACA1_034530	NW_004457626.1	63903	65166	D	ACA1_034530	join(<63903..63942,64055..64229,64314..64371,64470..64604,64664..64713,64800..64912,64985..>65166)	Acanthamoeba castellanii str. Neff	14923566
ACA1_034540	mRNA	ACA1_034540	NW_004457626.1	65576	66411	D	ACA1_034540	join(<65576..65599,65879..66039,66108..>66411)	Acanthamoeba castellanii str. Neff	14923567
ACA1_034550	mRNA	ACA1_034550	NW_004457626.1	67351	67887	R	ACA1_034550	complement(join(<67351..67496,67579..67692,67785..>67887))	Acanthamoeba castellanii str. Neff	14923544
ACA1_034560	mRNA	ACA1_034560	NW_004457626.1	68572	74202	D	ACA1_034560	join(<68572..69260,69345..69390,69464..69543,69642..69679,69761..69847,69926..70010,70162..70217,70291..70450,70564..70703,70777..71493,71595..71758,71863..71962,72077..72138,72236..72314,72404..72426,72515..72783,72887..73406,73516..>74202)	Acanthamoeba castellanii str. Neff	14923545
ACA1_034570	mRNA	ACA1_034570	NW_004457626.1	74645	76363	D	ACA1_034570	join(<74645..75082,75148..75327,75395..75501,75574..>76363)	Acanthamoeba castellanii str. Neff	14923546
ACA1_034580	mRNA	ACA1_034580	NW_004457626.1	76729	77604	R	ACA1_034580	complement(<76729..>77604)	Acanthamoeba castellanii str. Neff	14923547
ACA1_034590	mRNA	ACA1_034590	NW_004457626.1	78053	84202	R	ACA1_034590	complement(join(<78053..78164,78259..78383,78495..78584,78661..78742,78872..79098,79161..79376,79481..79680,79790..79911,79990..80087,80189..80286,80374..80494,80593..80664,80776..80871,80960..81369,81469..81712,81737..81934,82015..82092,82172..82284,82365..82436,82534..82795,82894..83433,83542..83602,83704..83825,83993..>84202))	Acanthamoeba castellanii str. Neff	14923548
ACA1_034600	mRNA	ACA1_034600	NW_004457626.1	84334	85591	D	ACA1_034600	join(<84334..84631,84774..84888,84989..85015,85177..85246,85319..85402,85478..>85591)	Acanthamoeba castellanii str. Neff	14923549
ACA1_034610	mRNA	ACA1_034610	NW_004457626.1	85727	86560	R	ACA1_034610	complement(join(<85727..85927,85958..86296,86405..>86560))	Acanthamoeba castellanii str. Neff	14923550
ACA1_034720	mRNA	ACA1_034720	NW_004457626.1	88621	91984	R	ACA1_034720	complement(join(<88621..88808,88888..88957,89038..89133,89217..89285,89371..89457,89544..89687,89797..89862,89942..90028,90109..90264,90585..90929,91015..91278,91454..91603,91662..91755,91854..>91984))	Acanthamoeba castellanii str. Neff	14923551
ACA1_034930	mRNA	ACA1_034930	NW_004457626.1	94397	94624	D	ACA1_034930	<94397..>94624	Acanthamoeba castellanii str. Neff	14923552
ACA1_035040	mRNA	ACA1_035040	NW_004457626.1	96393	96851	D	ACA1_035040	<96393..>96851	Acanthamoeba castellanii str. Neff	14923553
ACA1_307780	mRNA	ACA1_307780	NW_004457625.1	2664	4031	D	ACA1_307780	join(<2664..2870,2928..2960,3060..3147,3321..3423,3524..>4031)	Acanthamoeba castellanii str. Neff	14923541
ACA1_307790	mRNA	ACA1_307790	NW_004457625.1	5680	9695	R	ACA1_307790	complement(join(<5680..6981,7120..7175,7303..7535,7666..7788,7919..8007,8417..8571,8634..8798,8979..9131,9200..9358,9491..>9695))	Acanthamoeba castellanii str. Neff	14923540
ACA1_307800	mRNA	ACA1_307800	NW_004457625.1	11513	16976	D	ACA1_307800	join(<11513..11596,11796..11819,12001..12083,12196..12516,12609..12732,12804..12908,13019..13208,13301..13459,13600..13682,13795..13851,13951..14067,14174..14463,14549..14609,14715..14808,14905..15063,15152..15196,15266..15348,15436..15559,15635..15703,15791..15888,16189..16314,16405..16459,16541..16635,16719..>16976)	Acanthamoeba castellanii str. Neff	14923532
ACA1_307810	mRNA	ACA1_307810	NW_004457625.1	17068	18924	R	ACA1_307810	complement(join(<17068..17408,17486..17679,17756..18477,18664..>18924))	Acanthamoeba castellanii str. Neff	14923533
ACA1_307820	mRNA	ACA1_307820	NW_004457625.1	19143	20832	R	ACA1_307820	complement(join(<19143..19214,19286..19464,19547..19825,19918..20013,20121..20308,20396..20646,20743..>20832))	Acanthamoeba castellanii str. Neff	14923526
ACA1_307830	mRNA	ACA1_307830	NW_004457625.1	20983	21917	R	ACA1_307830	complement(join(<20983..21075,21162..21292,21362..>21917))	Acanthamoeba castellanii str. Neff	14923527
ACA1_307840	mRNA	ACA1_307840	NW_004457625.1	22017	23278	D	ACA1_307840	join(<22017..22068,22079..22174,22249..22683,22758..22944,23038..>23278)	Acanthamoeba castellanii str. Neff	14923528
ACA1_307850	mRNA	ACA1_307850	NW_004457625.1	23395	25014	D	ACA1_307850	join(<23395..23442,23464..23598,23742..24249,24343..24406,24489..24592,24687..24721,24829..>25014)	Acanthamoeba castellanii str. Neff	14923529
ACA1_307860	mRNA	ACA1_307860	NW_004457625.1	25327	26822	R	ACA1_307860	complement(join(<25327..25503,25697..25823,25922..26445,26517..>26822))	Acanthamoeba castellanii str. Neff	14923530
ACA1_307870	mRNA	ACA1_307870	NW_004457625.1	27501	28847	D	ACA1_307870	join(<27501..27756,27857..28046,28169..28374,28455..28645,28737..>28847)	Acanthamoeba castellanii str. Neff	14923531
ACA1_307880	mRNA	ACA1_307880	NW_004457625.1	29056	31289	R	ACA1_307880	complement(join(<29056..29213,29366..29490,29580..29671,29800..29952,30156..30308,30579..30787,30923..>31289))	Acanthamoeba castellanii str. Neff	14923534
ACA1_307890	mRNA	ACA1_307890	NW_004457625.1	31559	32774	R	ACA1_307890	complement(join(<31559..32095,32442..>32774))	Acanthamoeba castellanii str. Neff	14923535
ACA1_307900	mRNA	ACA1_307900	NW_004457625.1	33095	35595	R	ACA1_307900	complement(join(<33095..33626,33680..34089,34169..34332,34405..34462,34533..34796,34876..34980,35066..35236,35305..>35595))	Acanthamoeba castellanii str. Neff	14923536
ACA1_307910	mRNA	ACA1_307910	NW_004457625.1	36023	39303	R	ACA1_307910	complement(join(<36023..36238,36253..36473,36538..36642,36717..36900,36986..37095,37174..37342,37434..37505,37621..37728,37804..38010,38082..38378,38441..38567,38669..39084,39175..>39303))	Acanthamoeba castellanii str. Neff	14923537
ACA1_307920	mRNA	ACA1_307920	NW_004457625.1	39785	40870	D	ACA1_307920	<39785..>40870	Acanthamoeba castellanii str. Neff	14923538
ACA1_307930	mRNA	ACA1_307930	NW_004457625.1	41356	41802	D	ACA1_307930	<41356..>41802	Acanthamoeba castellanii str. Neff	14923539
ACA1_348220	mRNA	ACA1_348220	NW_004457738.1	14698	15532	R	ACA1_348220	complement(join(<14698..14890,15017..15142,15456..>15532))	Acanthamoeba castellanii str. Neff	14926823
ACA1_315740	mRNA	ACA1_315740	NW_004457623.1	84	895	D	ACA1_315740	join(<84..497,617..>895)	Acanthamoeba castellanii str. Neff	14923525
ACA1_315750	mRNA	ACA1_315750	NW_004457623.1	1508	2091	D	ACA1_315750	join(<1508..1708,1774..1874,1956..>2091)	Acanthamoeba castellanii str. Neff	14923519
ACA1_315760	mRNA	ACA1_315760	NW_004457623.1	3572	4342	R	ACA1_315760	complement(join(<3572..4023,4094..4148,4235..>4342))	Acanthamoeba castellanii str. Neff	14923520
ACA1_315770	mRNA	ACA1_315770	NW_004457623.1	4553	7040	D	ACA1_315770	join(<4553..4583,4754..4906,5043..5116,5221..5290,5388..5442,5575..5653,5785..5864,5947..6041,6151..6220,6316..6692,6820..>7040)	Acanthamoeba castellanii str. Neff	14923521
ACA1_315780	mRNA	ACA1_315780	NW_004457623.1	7311	7871	D	ACA1_315780	join(<7311..7371,7451..7650,7761..>7871)	Acanthamoeba castellanii str. Neff	14923517
ACA1_315790	mRNA	ACA1_315790	NW_004457623.1	8198	9098	R	ACA1_315790	complement(join(<8198..8257,8327..8431,8498..8548,8619..8714,8779..8870,8951..>9098))	Acanthamoeba castellanii str. Neff	14923518
ACA1_315800	mRNA	ACA1_315800	NW_004457623.1	9648	12156	R	ACA1_315800	complement(join(<9648..9941,10032..10285,10390..10628,10735..11890,11982..>12156))	Acanthamoeba castellanii str. Neff	14923522
ACA1_315810	mRNA	ACA1_315810	NW_004457623.1	12343	13992	R	ACA1_315810	complement(join(<12343..12501,12650..12784,12878..12956,13041..13161,13225..13287,13364..13421,13535..13582,13655..13794,13929..>13992))	Acanthamoeba castellanii str. Neff	14923523
ACA1_315820	mRNA	ACA1_315820	NW_004457623.1	14138	17069	D	ACA1_315820	join(<14138..14190,14382..14459,14607..14907,15034..15124,15220..15314,15409..15616,15720..15860,15946..16157,16288..16448,16540..16610,16696..>17069)	Acanthamoeba castellanii str. Neff	14923524
ACA1_141300	mRNA	ACA1_141300	NW_004457620.1	2948	3156	D	ACA1_141300	<2948..>3156	Acanthamoeba castellanii str. Neff	14923421
ACA1_141310	mRNA	ACA1_141310	NW_004457620.1	3377	4214	R	ACA1_141310	complement(join(<3377..3549,3637..3746,3876..3974,4108..>4214))	Acanthamoeba castellanii str. Neff	14923422
ACA1_141420	mRNA	ACA1_141420	NW_004457620.1	5690	7000	R	ACA1_141420	complement(join(<5690..5998,6088..6357,6457..6653,6778..>7000))	Acanthamoeba castellanii str. Neff	14923443
ACA1_141530	mRNA	ACA1_141530	NW_004457620.1	9652	10926	R	ACA1_141530	complement(join(<9652..9963,10042..10311,10376..10572,10704..>10926))	Acanthamoeba castellanii str. Neff	14923444
ACA1_141540	mRNA	ACA1_141540	NW_004457620.1	11818	14751	D	ACA1_141540	join(<11818..11913,11997..12096,12166..12203,12303..12392,12464..12536,12637..12703,12790..12897,12996..13095,13184..13241,13314..13441,13522..13608,13704..13763,13848..13928,14138..14184,14255..14378,14453..14516,14603..>14751)	Acanthamoeba castellanii str. Neff	14923445
ACA1_141550	mRNA	ACA1_141550	NW_004457620.1	14884	17957	R	ACA1_141550	complement(join(<14884..15047,15163..15327,15404..15476,15591..15781,15867..15953,16036..16320,16415..16549,16603..16797,16873..16999,17111..17245,17352..17469,17569..>17957))	Acanthamoeba castellanii str. Neff	14923446
ACA1_141560	mRNA	ACA1_141560	NW_004457620.1	18196	19139	D	ACA1_141560	join(<18196..18387,18817..18907,18994..>19139)	Acanthamoeba castellanii str. Neff	14923447
ACA1_141770	mRNA	ACA1_141770	NW_004457620.1	20399	20638	R	ACA1_141770	complement(<20399..>20638)	Acanthamoeba castellanii str. Neff	14923448
ACA1_141780	mRNA	ACA1_141780	NW_004457620.1	20813	22352	D	ACA1_141780	join(<20813..20897,21056..21099,21128..21346,21436..21548,21617..21735,21815..22055,22136..>22352)	Acanthamoeba castellanii str. Neff	14923449
ACA1_141790	mRNA	ACA1_141790	NW_004457620.1	22590	24515	D	ACA1_141790	join(<22590..22769,22893..23199,23324..23403,23527..23736,23840..24342,24413..>24515)	Acanthamoeba castellanii str. Neff	14923450
ACA1_141800	mRNA	ACA1_141800	NW_004457620.1	24646	25401	R	ACA1_141800	complement(join(<24646..24818,24927..25029,25144..>25401))	Acanthamoeba castellanii str. Neff	14923451
ACA1_141810	mRNA	ACA1_141810	NW_004457620.1	25575	26812	R	ACA1_141810	complement(join(<25575..26156,26268..26334,26357..26559,26654..>26812))	Acanthamoeba castellanii str. Neff	14923452
ACA1_141820	mRNA	ACA1_141820	NW_004457620.1	26922	27143	R	ACA1_141820	complement(<26922..>27143)	Acanthamoeba castellanii str. Neff	14923453
ACA1_141840	mRNA	ACA1_141840	NW_004457620.1	30122	36890	D	ACA1_141840	join(<30122..30247,30430..31247,31316..31443,31545..31643,31723..32555,32703..33302,33404..33414,33466..33752,33847..33906,34056..34220,34341..34819,34904..35701,35769..36194,36284..36605,36676..>36890)	Acanthamoeba castellanii str. Neff	14923455
ACA1_141850	mRNA	ACA1_141850	NW_004457620.1	36970	37918	R	ACA1_141850	complement(join(<36970..37157,37248..37536,37666..37817,37894..>37918))	Acanthamoeba castellanii str. Neff	14923456
ACA1_141860	mRNA	ACA1_141860	NW_004457620.1	38807	39535	D	ACA1_141860	join(<38807..38978,39078..39320,39417..>39535)	Acanthamoeba castellanii str. Neff	14923423
ACA1_141870	mRNA	ACA1_141870	NW_004457620.1	39686	40358	R	ACA1_141870	complement(join(<39686..39759,39823..39923,40009..>40358))	Acanthamoeba castellanii str. Neff	14923424
ACA1_141880	mRNA	ACA1_141880	NW_004457620.1	40594	42475	D	ACA1_141880	join(<40594..40670,40763..40829,40910..41123,41212..41471,41569..41724,41819..41922,42032..42168,42261..>42475)	Acanthamoeba castellanii str. Neff	14923425
ACA1_141890	mRNA	ACA1_141890	NW_004457620.1	42619	43827	R	ACA1_141890	complement(join(<42619..42966,43123..43231,43331..43416,43540..>43827))	Acanthamoeba castellanii str. Neff	14923426
ACA1_141900	mRNA	ACA1_141900	NW_004457620.1	44167	45599	R	ACA1_141900	complement(join(<44167..44262,44360..44482,44590..44751,44878..45088,45270..45421,45495..>45599))	Acanthamoeba castellanii str. Neff	14923427
ACA1_141910	mRNA	ACA1_141910	NW_004457620.1	45679	48737	R	ACA1_141910	complement(join(<45679..45971,46057..46657,46734..46926,46940..47394,47478..47644,47760..47947,48111..48177,48263..>48737))	Acanthamoeba castellanii str. Neff	14923428
ACA1_141920	mRNA	ACA1_141920	NW_004457620.1	49276	52159	D	ACA1_141920	join(<49276..49452,49582..49733,49811..50020,50053..50276,50384..50488,50595..50815,50903..51079,51213..51446,51540..51623,51760..51778,51795..>52159)	Acanthamoeba castellanii str. Neff	14923429
ACA1_141930	mRNA	ACA1_141930	NW_004457620.1	52319	52636	R	ACA1_141930	complement(<52319..>52636)	Acanthamoeba castellanii str. Neff	14923430
ACA1_141940	mRNA	ACA1_141940	NW_004457620.1	53124	55123	D	ACA1_141940	join(<53124..53145,53254..53396,53504..53602,53710..53798,53865..53975,54157..54200,54321..54406,54580..54666,54761..>55123)	Acanthamoeba castellanii str. Neff	14923431
ACA1_141950	mRNA	ACA1_141950	NW_004457620.1	55216	59581	R	ACA1_141950	complement(join(<55216..55428,55541..57556,57636..57803,57900..58470,58593..58882,58970..59137,59330..59446,59546..>59581))	Acanthamoeba castellanii str. Neff	14923432
ACA1_141960	mRNA	ACA1_141960	NW_004457620.1	59873	62970	R	ACA1_141960	complement(join(<59873..60003,60154..60259,60358..60430,60552..61034,61130..61214,61305..61390,61489..61585,61672..61745,61815..61862,61968..62079,62179..62302,62399..62466,62654..62676,62747..>62970))	Acanthamoeba castellanii str. Neff	14923433
ACA1_141970	mRNA	ACA1_141970	NW_004457620.1	63339	64121	D	ACA1_141970	join(<63339..63672,63816..63913,63990..>64121)	Acanthamoeba castellanii str. Neff	14923434
ACA1_141980	mRNA	ACA1_141980	NW_004457620.1	64343	67206	D	ACA1_141980	join(<64343..64553,64642..64722,64826..65068,65164..65384,65465..65824,66109..66244,66313..66349,66442..66611,66723..66762,66859..66953,67043..>67206)	Acanthamoeba castellanii str. Neff	14923435
ACA1_141990	mRNA	ACA1_141990	NW_004457620.1	67607	68166	D	ACA1_141990	join(<67607..67739,67841..67872,67915..68016,68092..>68166)	Acanthamoeba castellanii str. Neff	14923436
ACA1_142000	mRNA	ACA1_142000	NW_004457620.1	68320	69511	R	ACA1_142000	complement(join(<68320..68394,68508..68893,68981..69364,69448..>69511))	Acanthamoeba castellanii str. Neff	14923437
ACA1_142010	mRNA	ACA1_142010	NW_004457620.1	69748	70151	D	ACA1_142010	join(<69748..69819,69954..>70151)	Acanthamoeba castellanii str. Neff	14923438
ACA1_142020	mRNA	ACA1_142020	NW_004457620.1	70386	70640	R	ACA1_142020	complement(<70386..>70640)	Acanthamoeba castellanii str. Neff	14923439
ACA1_142030	mRNA	ACA1_142030	NW_004457620.1	70784	74691	D	ACA1_142030	join(<70784..71155,71229..71423,71522..71984,72084..72192,72330..72444,72539..72633,72793..72936,73024..73207,73327..73436,73533..>74691)	Acanthamoeba castellanii str. Neff	14923440
ACA1_142040	mRNA	ACA1_142040	NW_004457620.1	74787	75342	D	ACA1_142040	join(<74787..75033,75106..75203,75298..>75342)	Acanthamoeba castellanii str. Neff	14923441
ACA1_142050	mRNA	ACA1_142050	NW_004457620.1	76140	78546	D	ACA1_142050	join(<76140..76215,76409..76494,76644..76729,76844..76905,76973..77181,77298..77388,77906..77965,78042..78168,78305..78407,78508..>78546)	Acanthamoeba castellanii str. Neff	14923442
ACA1_142070	mRNA	ACA1_142070	NW_004457620.1	82054	83575	R	ACA1_142070	complement(join(<82054..82133,82255..83009,83103..83237,83364..>83575))	Acanthamoeba castellanii str. Neff	14923458
ACA1_142080	mRNA	ACA1_142080	NW_004457620.1	83936	84340	R	ACA1_142080	complement(<83936..>84340)	Acanthamoeba castellanii str. Neff	14923459
ACA1_142090	mRNA	ACA1_142090	NW_004457620.1	84779	85943	D	ACA1_142090	join(<84779..84963,85041..85159,85247..85447,85560..85673,85756..>85943)	Acanthamoeba castellanii str. Neff	14923460
ACA1_142100	mRNA	ACA1_142100	NW_004457620.1	86497	87018	R	ACA1_142100	complement(<86497..>87018)	Acanthamoeba castellanii str. Neff	14923461
ACA1_142110	mRNA	ACA1_142110	NW_004457620.1	87405	88238	R	ACA1_142110	complement(join(<87405..87642,87811..>88238))	Acanthamoeba castellanii str. Neff	14923462
ACA1_142120	mRNA	ACA1_142120	NW_004457620.1	88637	89457	D	ACA1_142120	join(<88637..88723,89202..89290,89409..>89457)	Acanthamoeba castellanii str. Neff	14923463
ACA1_142130	mRNA	ACA1_142130	NW_004457620.1	89834	91905	D	ACA1_142130	join(<89834..90072,90157..90233,90321..90404,90468..90851,90929..91043,91152..91230,91379..91437,91580..91705,91797..>91905)	Acanthamoeba castellanii str. Neff	14923464
ACA1_142140	mRNA	ACA1_142140	NW_004457620.1	92249	95041	D	ACA1_142140	join(<92249..92346,92447..92647,92749..92888,92946..92998,93099..93237,93340..93477,93609..93764,93837..94023,94091..94197,94283..94419,94518..94671,94792..94875,94971..>95041)	Acanthamoeba castellanii str. Neff	14923465
ACA1_142150	mRNA	ACA1_142150	NW_004457620.1	97251	99294	D	ACA1_142150	join(<97251..97286,97369..97456,97578..97751,97864..97965,98072..98215,98325..98446,98527..98760,98875..>99294)	Acanthamoeba castellanii str. Neff	14923466
ACA1_142160	mRNA	ACA1_142160	NW_004457620.1	99374	101525	D	ACA1_142160	join(<99374..99497,99600..99687,99821..99906,100016..100363,100421..100639,100739..100851,100870..100937,101062..101234,101380..>101525)	Acanthamoeba castellanii str. Neff	14923467
ACA1_142170	mRNA	ACA1_142170	NW_004457620.1	101806	102775	D	ACA1_142170	join(<101806..101838,101868..102011,102320..>102775)	Acanthamoeba castellanii str. Neff	14923468
ACA1_142180	mRNA	ACA1_142180	NW_004457620.1	103005	103549	D	ACA1_142180	join(<103005..103235,103262..>103549)	Acanthamoeba castellanii str. Neff	14923469
ACA1_142190	mRNA	ACA1_142190	NW_004457620.1	103628	104417	D	ACA1_142190	join(<103628..103813,103915..103981,104094..104210,104305..>104417)	Acanthamoeba castellanii str. Neff	14923470
ACA1_142200	mRNA	ACA1_142200	NW_004457620.1	104788	108979	D	ACA1_142200	join(<104788..105938,106047..106152,106247..106381,106486..106555,106665..106884,106962..107063,107147..107260,107340..107420,107561..107987,108114..108254,108320..108411,108555..108695,108769..>108979)	Acanthamoeba castellanii str. Neff	14923471
ACA1_142210	mRNA	ACA1_142210	NW_004457620.1	110272	115377	R	ACA1_142210	complement(join(<110272..110636,110729..110848,110934..111090,111211..111375,111435..111583,111693..111802,111905..112200,112302..112415,112525..112734,112815..113125,113229..113384,113452..113594,113684..113755,113872..114002,114124..114159,114259..114381,114485..114677,114789..114901,115091..115179,115260..>115377))	Acanthamoeba castellanii str. Neff	14923472
ACA1_142220	mRNA	ACA1_142220	NW_004457620.1	115582	116469	R	ACA1_142220	complement(join(<115582..115926,116004..116149,116244..>116469))	Acanthamoeba castellanii str. Neff	14923473
ACA1_142230	mRNA	ACA1_142230	NW_004457620.1	116892	117238	R	ACA1_142230	complement(join(<116892..116932,117064..>117238))	Acanthamoeba castellanii str. Neff	14923474
ACA1_142240	mRNA	ACA1_142240	NW_004457620.1	117468	121474	R	ACA1_142240	complement(join(<117468..117580,117708..117821,117915..118133,118247..118384,118470..118560,118654..118807,118890..118936,119014..119168,119279..120050,120151..120297,120455..120657,120773..120865,121001..121270,121471..>121474))	Acanthamoeba castellanii str. Neff	14923475
ACA1_142250	mRNA	ACA1_142250	NW_004457620.1	122366	122833	R	ACA1_142250	complement(join(<122366..122450,122514..122652,122731..>122833))	Acanthamoeba castellanii str. Neff	14923476
ACA1_142260	mRNA	ACA1_142260	NW_004457620.1	123205	125006	R	ACA1_142260	complement(join(<123205..123332,123428..123503,123605..123679,123778..123819,123940..124033,124150..124296,124392..124610,124728..124762,124869..>125006))	Acanthamoeba castellanii str. Neff	14923477
ACA1_142270	mRNA	ACA1_142270	NW_004457620.1	125667	126721	D	ACA1_142270	join(<125667..125787,125911..126004,126120..126250,126360..126502,126626..>126721)	Acanthamoeba castellanii str. Neff	14923478
ACA1_142280	mRNA	ACA1_142280	NW_004457620.1	126868	128335	R	ACA1_142280	complement(join(<126868..126993,127108..127241,127332..127547,127636..127804,127848..127948,128098..>128335))	Acanthamoeba castellanii str. Neff	14923479
ACA1_142290	mRNA	ACA1_142290	NW_004457620.1	128453	131306	R	ACA1_142290	complement(join(<128453..128462,128497..129561,129680..129809,129921..130110,130215..130343,130464..130545,130670..130744,130811..130873,131003..131095,131176..>131306))	Acanthamoeba castellanii str. Neff	14923480
ACA1_142300	mRNA	ACA1_142300	NW_004457620.1	131562	133300	R	ACA1_142300	complement(join(<131562..131768,131897..131994,132094..132269,132390..132478,132592..132755,132857..133031,133181..>133300))	Acanthamoeba castellanii str. Neff	14923481
ACA1_142310	mRNA	ACA1_142310	NW_004457620.1	133485	136075	D	ACA1_142310	join(<133485..133588,133747..133755,133862..134008,134168..134418,134523..134686,134835..135088,135206..135302,135407..135559,135646..135734,135844..>136075)	Acanthamoeba castellanii str. Neff	14923482
ACA1_142320	mRNA	ACA1_142320	NW_004457620.1	136285	136829	D	ACA1_142320	join(<136285..136569,136707..>136829)	Acanthamoeba castellanii str. Neff	14923483
ACA1_142330	mRNA	ACA1_142330	NW_004457620.1	137317	138526	R	ACA1_142330	complement(join(<137317..137877,137998..138078,138185..>138526))	Acanthamoeba castellanii str. Neff	14923484
ACA1_142340	mRNA	ACA1_142340	NW_004457620.1	138897	143371	D	ACA1_142340	join(<138897..139087,139237..139327,139476..139569,139654..139699,140214..140319,140440..140680,140772..140860,140953..141036,141135..141221,141305..141359,141491..141607,141726..141840,141945..141969,142101..142277,142403..142658,142779..>143371)	Acanthamoeba castellanii str. Neff	14923485
ACA1_142350	mRNA	ACA1_142350	NW_004457620.1	143677	145279	D	ACA1_142350	join(<143677..143761,143870..144173,144302..144461,144602..>145279)	Acanthamoeba castellanii str. Neff	14923486
ACA1_142360	mRNA	ACA1_142360	NW_004457620.1	146941	150786	R	ACA1_142360	complement(join(<146941..147012,147102..147192,147278..147489,147632..147869,147954..149290,149384..149443,149581..149679,149801..150091,150388..>150786))	Acanthamoeba castellanii str. Neff	14923487
ACA1_142370	mRNA	ACA1_142370	NW_004457620.1	150972	153361	R	ACA1_142370	complement(join(<150972..151037,151148..151236,151333..151472,151568..151634,151727..151826,151923..152293,152388..152533,152617..152635,152758..152902,153021..153137,153245..>153361))	Acanthamoeba castellanii str. Neff	14923488
ACA1_142380	mRNA	ACA1_142380	NW_004457620.1	153751	154936	D	ACA1_142380	join(<153751..153978,154074..154231,154332..154514,154595..154715,154793..>154936)	Acanthamoeba castellanii str. Neff	14923489
ACA1_142390	mRNA	ACA1_142390	NW_004457620.1	155631	158404	R	ACA1_142390	complement(join(<155631..155837,155958..156014,156169..156331,156429..156566,156675..156760,156871..156965,157108..157233,157358..157562,157677..157897,157982..158020,158164..158225,158292..>158404))	Acanthamoeba castellanii str. Neff	14923490
ACA1_142400	mRNA	ACA1_142400	NW_004457620.1	158656	161302	D	ACA1_142400	join(<158656..158724,158810..159075,159204..159322,159403..159662,159749..159959,160035..160282,160385..160618,160688..161044,161183..>161302)	Acanthamoeba castellanii str. Neff	14923491
ACA1_142420	mRNA	ACA1_142420	NW_004457620.1	171220	172713	D	ACA1_142420	<171220..>172713	Acanthamoeba castellanii str. Neff	14923493
ACA1_142430	mRNA	ACA1_142430	NW_004457620.1	172930	177410	R	ACA1_142430	complement(join(<172930..173506,173787..173986,174551..174743,174854..174924,175326..175521,175700..175781,175898..175989,176139..176262,176319..176349,176559..176720,176837..176983,177171..>177410))	Acanthamoeba castellanii str. Neff	14923494
ACA1_142550	mRNA	ACA1_142550	NW_004457620.1	179074	180065	R	ACA1_142550	complement(join(<179074..179284,179380..179453,179550..179684,179773..179866,179977..>180065))	Acanthamoeba castellanii str. Neff	14923496
ACA1_142560	mRNA	ACA1_142560	NW_004457620.1	181601	185274	D	ACA1_142560	join(<181601..181629,181733..181800,181904..182092,182274..182341,182529..182804,183018..183174,183403..183561,183739..184172,184307..184441,184594..>185274)	Acanthamoeba castellanii str. Neff	14923497
ACA1_142570	mRNA	ACA1_142570	NW_004457620.1	185291	185953	D	ACA1_142570	join(<185291..185375,185583..185727,185794..>185953)	Acanthamoeba castellanii str. Neff	14923498
ACA1_142580	mRNA	ACA1_142580	NW_004457620.1	186073	190552	R	ACA1_142580	complement(join(<186073..186198,186380..186484,186644..186719,186834..186949,187072..187215,187541..187609,187706..187912,188135..188279,188421..188532,188717..188912,189058..189339,189541..189732,189837..189872,189945..190053,190229..190421,190459..>190552))	Acanthamoeba castellanii str. Neff	14923499
ACA1_142590	mRNA	ACA1_142590	NW_004457620.1	191314	194631	D	ACA1_142590	join(<191314..191383,191430..191608,191770..191916,192021..192162,192295..192443,192579..192689,192755..192857,192974..193123,193241..193402,193540..193747,193923..194129,194240..194423,194551..>194631)	Acanthamoeba castellanii str. Neff	14923500
ACA1_142600	mRNA	ACA1_142600	NW_004457620.1	195597	199016	D	ACA1_142600	join(<195597..195866,195967..196265,196378..196459,196772..198585,198653..198773,198903..>199016)	Acanthamoeba castellanii str. Neff	14923501
ACA1_142610	mRNA	ACA1_142610	NW_004457620.1	199126	201614	R	ACA1_142610	complement(join(<199126..199733,199830..199927,200078..200146,200279..200466,200548..200722,200902..201016,201135..201225,201351..>201614))	Acanthamoeba castellanii str. Neff	14923502
ACA1_142620	mRNA	ACA1_142620	NW_004457620.1	201814	203934	D	ACA1_142620	<201814..>203934	Acanthamoeba castellanii str. Neff	14923503
ACA1_142630	mRNA	ACA1_142630	NW_004457620.1	204651	205906	D	ACA1_142630	join(<204651..204743,204813..205022,205102..205166,205290..205769,205816..>205906)	Acanthamoeba castellanii str. Neff	14923504
ACA1_142640	mRNA	ACA1_142640	NW_004457620.1	208180	211032	R	ACA1_142640	complement(join(<208180..208932,209080..209175,209278..209347,209608..209800,210023..210198,210336..210515,210638..210697,210854..>211032))	Acanthamoeba castellanii str. Neff	14923505
ACA1_142650	mRNA	ACA1_142650	NW_004457620.1	211336	213187	R	ACA1_142650	complement(join(<211336..211448,211664..211865,212058..212248,212325..212373,212612..212860,212984..213003,213076..>213187))	Acanthamoeba castellanii str. Neff	14923506
ACA1_142660	mRNA	ACA1_142660	NW_004457620.1	213327	216282	D	ACA1_142660	join(<213327..213510,213730..214040,214237..214302,214474..214539,214681..214817,214883..214924,215056..215121,215332..215512,215622..215774,215926..>216282)	Acanthamoeba castellanii str. Neff	14923507
ACA1_142670	mRNA	ACA1_142670	NW_004457620.1	216566	218565	R	ACA1_142670	complement(join(<216566..216691,216812..216978,217354..217799,217961..218155,218301..218363,218438..>218565))	Acanthamoeba castellanii str. Neff	14923508
ACA1_142680	mRNA	ACA1_142680	NW_004457620.1	218684	221132	D	ACA1_142680	join(<218684..218746,218827..218869,219111..219188,219289..219402,219563..219694,219888..219988,220206..220299,220421..220477,220595..220858,221011..>221132)	Acanthamoeba castellanii str. Neff	14923509
ACA1_142690	mRNA	ACA1_142690	NW_004457620.1	221277	223136	D	ACA1_142690	join(<221277..221312,221330..221433,221567..221837,222221..222454,222552..222701,222807..>223136)	Acanthamoeba castellanii str. Neff	14923510
ACA1_142810	mRNA	ACA1_142810	NW_004457620.1	242013	243312	R	ACA1_142810	complement(join(<242013..242121,242260..242379,242846..242992,243155..>243312))	Acanthamoeba castellanii str. Neff	14923512
ACA1_142820	mRNA	ACA1_142820	NW_004457620.1	243471	245238	D	ACA1_142820	join(<243471..243659,243734..243751,243945..243988,244084..244159,244267..244392,244489..244627,244694..244728,244796..244827,244902..245020,245102..>245238)	Acanthamoeba castellanii str. Neff	14923513
ACA1_142830	mRNA	ACA1_142830	NW_004457620.1	245394	245612	D	ACA1_142830	<245394..>245612	Acanthamoeba castellanii str. Neff	14923514
ACA1_142840	mRNA	ACA1_142840	NW_004457620.1	245756	247514	R	ACA1_142840	complement(join(<245756..245796,245870..246031,246137..246375,246487..246619,246731..>247514))	Acanthamoeba castellanii str. Neff	14923515
ACA1_322520	mRNA	ACA1_322520	NW_004457619.1	908	5284	R	ACA1_322520	complement(join(<908..2220,2359..3128,3252..3344,3458..3637,3738..4697,4786..4851,5013..>5284))	Acanthamoeba castellanii str. Neff	14923420
ACA1_322530	mRNA	ACA1_322530	NW_004457619.1	5822	10141	R	ACA1_322530	complement(join(<5822..6021,6144..6245,6355..6499,6573..6677,6739..6921,7009..7083,7180..7249,7327..7440,7564..7637,7713..7891,7935..8208,8305..8970,9145..9311,9394..9480,9628..9703,9995..>10141))	Acanthamoeba castellanii str. Neff	14923412
ACA1_322540	mRNA	ACA1_322540	NW_004457619.1	10672	11377	R	ACA1_322540	complement(join(<10672..10691,10801..10972,11062..11238,11276..>11377))	Acanthamoeba castellanii str. Neff	14923414
ACA1_322550	mRNA	ACA1_322550	NW_004457619.1	11876	16588	D	ACA1_322550	join(<11876..12154,12437..12561,12799..12880,12968..13080,13157..13257,13356..13445,13552..13733,13797..13974,14059..14225,14368..14512,14623..14734,14825..14996,15105..15263,15325..15429,15530..16119,16203..16269,16346..16405,16508..>16588)	Acanthamoeba castellanii str. Neff	14923413
ACA1_322560	mRNA	ACA1_322560	NW_004457619.1	17193	21052	D	ACA1_322560	join(<17193..19372,19446..19665,19737..20050,20146..20728,20822..>21052)	Acanthamoeba castellanii str. Neff	14923415
ACA1_322570	mRNA	ACA1_322570	NW_004457619.1	21496	23391	D	ACA1_322570	join(<21496..21627,21769..22046,22186..22299,22410..22525,22629..22732,22821..23087,23164..>23391)	Acanthamoeba castellanii str. Neff	14923416
ACA1_322580	mRNA	ACA1_322580	NW_004457619.1	23603	24042	D	ACA1_322580	join(<23603..23648,23758..23825,23935..>24042)	Acanthamoeba castellanii str. Neff	14923417
ACA1_322690	mRNA	ACA1_322690	NW_004457619.1	28806	30297	D	ACA1_322690	join(<28806..28915,29014..29089,29198..29398,29517..29709,29792..29927,30033..30171,30265..>30297)	Acanthamoeba castellanii str. Neff	14923419
ACA1_322700	mRNA	ACA1_322700	NW_004457619.1	30587	33426	D	ACA1_322700	join(<30587..31616,31699..31779,31854..32032,32109..32271,32369..32475,32515..32579,32663..32814,32887..32993,33079..33192,33271..>33426)	Acanthamoeba castellanii str. Neff	14923418
ACA1_322710	mRNA	ACA1_322710	NW_004457619.1	33472	35119	D	ACA1_322710	join(<33472..33555,33620..33728,33806..33899,33987..34076,34156..34283,34448..34512,34580..34694,34772..34853,34945..>35119)	Acanthamoeba castellanii str. Neff	14923407
ACA1_322720	mRNA	ACA1_322720	NW_004457619.1	35167	36795	D	ACA1_322720	join(<35167..35206,35311..35447,35535..35688,35775..35894,35962..36068,36151..36397,36515..>36795)	Acanthamoeba castellanii str. Neff	14923408
ACA1_322730	mRNA	ACA1_322730	NW_004457619.1	37157	38879	D	ACA1_322730	join(<37157..37427,37892..37950,38067..38159,38247..38343,38422..38535,38635..38718,38797..>38879)	Acanthamoeba castellanii str. Neff	14923409
ACA1_322740	mRNA	ACA1_322740	NW_004457619.1	39272	40084	D	ACA1_322740	<39272..>40084	Acanthamoeba castellanii str. Neff	14923410
ACA1_322750	mRNA	ACA1_322750	NW_004457619.1	40581	46996	D	ACA1_322750	join(<40581..40678,40795..>46996)	Acanthamoeba castellanii str. Neff	14923411
ACA1_322770	mRNA	ACA1_322770	NW_004457619.1	50453	56030	R	ACA1_322770	complement(join(<50453..50635,50789..50979,51057..51181,51252..51324,51413..51545,51630..51739,51814..51930,52027..52145,52249..52414,52574..52681,52764..53574,53689..53874,53955..54062,54183..54242,54338..54459,54529..54634,54690..54751,54856..54938,55010..55072,55137..55252,55375..55445,55546..55598,55667..55782,55929..>56030))	Acanthamoeba castellanii str. Neff	14923403
ACA1_322880	mRNA	ACA1_322880	NW_004457619.1	56906	57509	R	ACA1_322880	complement(join(<56906..57108,57188..57292,57374..>57509))	Acanthamoeba castellanii str. Neff	14923404
ACA1_322990	mRNA	ACA1_322990	NW_004457619.1	60454	62204	R	ACA1_322990	complement(join(<60454..60606,60647..60990,61022..61654,61731..61842,62046..>62204))	Acanthamoeba castellanii str. Neff	14923405
ACA1_323000	mRNA	ACA1_323000	NW_004457619.1	62534	63616	R	ACA1_323000	complement(join(<62534..62802,62923..>63616))	Acanthamoeba castellanii str. Neff	14923406
ACA1_250410	mRNA	ACA1_250410	NW_004457618.1	1386	2783	R	ACA1_250410	complement(join(<1386..1998,2182..2317,2477..>2783))	Acanthamoeba castellanii str. Neff	14923401
ACA1_250420	mRNA	ACA1_250420	NW_004457618.1	3814	4384	D	ACA1_250420	join(<3814..3970,4254..>4384)	Acanthamoeba castellanii str. Neff	14923169
ACA1_250430	mRNA	ACA1_250430	NW_004457618.1	4636	6867	D	ACA1_250430	join(<4636..4729,4850..5094,5238..5385,6177..6235,6379..6584,6684..>6867)	Acanthamoeba castellanii str. Neff	14923170
ACA1_250540	mRNA	ACA1_250540	NW_004457618.1	6951	8936	D	ACA1_250540	join(<6951..7113,7189..7670,7718..8044,8111..8188,8311..8481,8555..8670,8762..>8936)	Acanthamoeba castellanii str. Neff	14923171
ACA1_250550	mRNA	ACA1_250550	NW_004457618.1	9716	12259	R	ACA1_250550	complement(join(<9716..10844,10923..11314,11394..11559,11635..11721,11829..>12259))	Acanthamoeba castellanii str. Neff	14923172
ACA1_250560	mRNA	ACA1_250560	NW_004457618.1	12487	16198	R	ACA1_250560	complement(join(<12487..12888,13161..13494,13630..13829,13909..14022,14179..14630,14683..14932,14943..15146,15225..15338,15429..15473,15554..15670,15751..16007,16064..16115,16148..>16198))	Acanthamoeba castellanii str. Neff	14923173
ACA1_250670	mRNA	ACA1_250670	NW_004457618.1	16554	21450	R	ACA1_250670	complement(join(<16554..16584,16726..17162,17179..17292,17372..17485,17572..17616,17696..17812,17893..18149,18248..18501,18586..18733,18830..18965,19055..19201,19326..19567,19663..20018,20114..20427,20525..20833,20924..21061,21154..21214,21374..21401,21444..>21450))	Acanthamoeba castellanii str. Neff	14923174
ACA1_250780	mRNA	ACA1_250780	NW_004457618.1	22409	24348	R	ACA1_250780	complement(join(<22409..22837,23074..23115,23369..23457,23546..23615,23714..23845,23933..24271,24307..>24348))	Acanthamoeba castellanii str. Neff	14923175
ACA1_250790	mRNA	ACA1_250790	NW_004457618.1	24838	27745	D	ACA1_250790	join(<24838..25080,25174..25263,25485..25541,25623..25749,25849..25962,26043..26791,26867..26926,27011..27100,27265..27369,27454..27519,27617..>27745)	Acanthamoeba castellanii str. Neff	14923176
ACA1_250800	mRNA	ACA1_250800	NW_004457618.1	28274	30435	D	ACA1_250800	join(<28274..29089,29183..29345,29440..29634,29735..29841,29906..30004,30087..30219,30293..>30435)	Acanthamoeba castellanii str. Neff	14923177
ACA1_250810	mRNA	ACA1_250810	NW_004457618.1	30686	33384	R	ACA1_250810	complement(join(<30686..30769,30865..31081,31205..31371,31464..31655,31771..31876,31954..32016,32115..32193,32281..32352,32468..32631,32685..32787,32885..33089,33208..>33384))	Acanthamoeba castellanii str. Neff	14923178
ACA1_250820	mRNA	ACA1_250820	NW_004457618.1	34079	36139	R	ACA1_250820	complement(join(<34079..34493,34581..34912,35095..35498,35618..36113,36128..>36139))	Acanthamoeba castellanii str. Neff	14923179
ACA1_250830	mRNA	ACA1_250830	NW_004457618.1	36546	38977	R	ACA1_250830	complement(join(<36546..36624,36647..36720,36764..37001,37130..37310,37384..37500,37590..37750,37835..37897,37976..38072,38133..38271,38416..38511,38621..>38977))	Acanthamoeba castellanii str. Neff	14923180
ACA1_250940	mRNA	ACA1_250940	NW_004457618.1	39942	42179	R	ACA1_250940	complement(join(<39942..40094,40339..40742,40854..41046,41317..41720,41848..41978,42070..>42179))	Acanthamoeba castellanii str. Neff	14923181
ACA1_251050	mRNA	ACA1_251050	NW_004457618.1	42239	44540	R	ACA1_251050	complement(join(<42239..42290,42379..42447,42540..42655,42736..42806,42889..43001,43068..43135,43214..43384,43459..43562,43642..43756,43839..44178,44353..>44540))	Acanthamoeba castellanii str. Neff	14923182
ACA1_251060	mRNA	ACA1_251060	NW_004457618.1	44633	46572	R	ACA1_251060	complement(join(<44633..44855,44925..45036,45131..45284,45360..45493,45597..45745,45832..45910,45985..46114,46226..46312,46549..>46572))	Acanthamoeba castellanii str. Neff	14923183
ACA1_251170	mRNA	ACA1_251170	NW_004457618.1	47187	47933	R	ACA1_251170	complement(join(<47187..47195,47333..47403,47492..47604,47671..47738,47817..>47933))	Acanthamoeba castellanii str. Neff	14923184
ACA1_251280	mRNA	ACA1_251280	NW_004457618.1	48964	49446	R	ACA1_251280	complement(join(<48964..49338,49414..>49446))	Acanthamoeba castellanii str. Neff	14923185
ACA1_251290	mRNA	ACA1_251290	NW_004457618.1	49731	53974	D	ACA1_251290	join(<49731..49831,49895..49965,50040..50716,50796..50945,51037..51134,51200..51644,51714..51914,51991..53492,53503..>53974)	Acanthamoeba castellanii str. Neff	14923186
ACA1_251300	mRNA	ACA1_251300	NW_004457618.1	54046	55250	R	ACA1_251300	complement(join(<54046..54521,54619..54714,54784..54902,55015..>55250))	Acanthamoeba castellanii str. Neff	14923187
ACA1_251310	mRNA	ACA1_251310	NW_004457618.1	55464	56345	D	ACA1_251310	join(<55464..55563,55600..>56345)	Acanthamoeba castellanii str. Neff	14923188
ACA1_251320	mRNA	ACA1_251320	NW_004457618.1	56475	56906	D	ACA1_251320	<56475..>56906	Acanthamoeba castellanii str. Neff	14923189
ACA1_251330	mRNA	ACA1_251330	NW_004457618.1	57133	58571	D	ACA1_251330	join(<57133..57219,57294..57419,57498..57682,57723..57819,57896..58078,58185..>58571)	Acanthamoeba castellanii str. Neff	14923190
ACA1_251340	mRNA	ACA1_251340	NW_004457618.1	58809	61029	D	ACA1_251340	join(<58809..59147,59281..59420,59536..59635,59673..59710,59786..59910,60055..60308,60394..60575,60636..60760,60834..60897,60975..>61029)	Acanthamoeba castellanii str. Neff	14923191
ACA1_251350	mRNA	ACA1_251350	NW_004457618.1	61268	63198	R	ACA1_251350	complement(join(<61268..61372,61467..61544,61627..61734,62390..62470,62555..62650,62748..62824,62946..63057,63133..>63198))	Acanthamoeba castellanii str. Neff	14923192
ACA1_251460	mRNA	ACA1_251460	NW_004457618.1	63511	64724	D	ACA1_251460	join(<63511..63586,63654..63740,63819..64207,64321..64516,64639..>64724)	Acanthamoeba castellanii str. Neff	14923193
ACA1_251480	mRNA	ACA1_251480	NW_004457618.1	70364	71339	R	ACA1_251480	complement(join(<70364..70525,70686..70769,70852..70995,71055..71128,71240..>71339))	Acanthamoeba castellanii str. Neff	14923195
ACA1_251490	mRNA	ACA1_251490	NW_004457618.1	72839	73563	D	ACA1_251490	join(<72839..73079,73163..73271,73530..>73563)	Acanthamoeba castellanii str. Neff	14923196
ACA1_251500	mRNA	ACA1_251500	NW_004457618.1	75045	75479	R	ACA1_251500	complement(join(<75045..75287,75331..75371,75419..>75479))	Acanthamoeba castellanii str. Neff	14923197
ACA1_251510	mRNA	ACA1_251510	NW_004457618.1	77893	78471	D	ACA1_251510	join(<77893..78010,78089..>78471)	Acanthamoeba castellanii str. Neff	14923198
ACA1_251520	mRNA	ACA1_251520	NW_004457618.1	78563	78910	R	ACA1_251520	complement(join(<78563..78577,78637..78753,78813..78886,78898..>78910))	Acanthamoeba castellanii str. Neff	14923199
ACA1_251530	mRNA	ACA1_251530	NW_004457618.1	79324	80448	R	ACA1_251530	complement(join(<79324..79334,79423..79546,79600..79714,79839..79911,79987..80135,80210..80290,80378..>80448))	Acanthamoeba castellanii str. Neff	14923200
ACA1_251540	mRNA	ACA1_251540	NW_004457618.1	80632	81598	D	ACA1_251540	join(<80632..80673,80937..81006,81092..81177,81292..81478,81576..>81598)	Acanthamoeba castellanii str. Neff	14923201
ACA1_251550	mRNA	ACA1_251550	NW_004457618.1	81777	83713	R	ACA1_251550	complement(join(<81777..81973,82048..82104,82172..82268,82488..82595,82709..82799,82863..83026,83129..83280,83371..83404,83503..83566,83634..>83713))	Acanthamoeba castellanii str. Neff	14923202
ACA1_251560	mRNA	ACA1_251560	NW_004457618.1	84484	86043	D	ACA1_251560	join(<84484..84923,85037..85149,85263..85390,85530..85639,85733..85848,85925..>86043)	Acanthamoeba castellanii str. Neff	14923203
ACA1_251570	mRNA	ACA1_251570	NW_004457618.1	86119	88336	R	ACA1_251570	complement(join(<86119..86313,86397..86704,86793..87039,87130..87246,87316..87517,87534..88122,88186..>88336))	Acanthamoeba castellanii str. Neff	14923204
ACA1_251580	mRNA	ACA1_251580	NW_004457618.1	88446	89394	R	ACA1_251580	complement(join(<88446..88682,88768..88873,88950..89057,89138..>89394))	Acanthamoeba castellanii str. Neff	14923205
ACA1_251600	mRNA	ACA1_251600	NW_004457618.1	92105	92296	R	ACA1_251600	complement(<92105..>92296)	Acanthamoeba castellanii str. Neff	14923207
ACA1_251610	mRNA	ACA1_251610	NW_004457618.1	93146	93910	D	ACA1_251610	join(<93146..93253,93325..93525,93615..93700,93769..93820,93842..>93910)	Acanthamoeba castellanii str. Neff	14923208
ACA1_251620	mRNA	ACA1_251620	NW_004457618.1	94176	94910	D	ACA1_251620	<94176..>94910	Acanthamoeba castellanii str. Neff	14923209
ACA1_251640	mRNA	ACA1_251640	NW_004457618.1	98064	102330	D	ACA1_251640	join(<98064..98382,98496..98620,98710..98848,98951..99134,99195..99330,99423..99503,99647..99701,99798..99955,100051..100177,100272..100340,100442..100723,100818..100983,101067..101379,101458..101582,101671..101773,101843..101903,101971..102079,102165..>102330)	Acanthamoeba castellanii str. Neff	14923211
ACA1_251650	mRNA	ACA1_251650	NW_004457618.1	102967	107889	D	ACA1_251650	join(<102967..103055,103124..103824,103912..104067,104146..104305,104390..104520,104633..104709,104781..104904,105019..105159,105284..105443,105531..105655,105861..105931,106013..106192,106315..106396,106481..107140,107313..107394,107494..107633,107741..>107889)	Acanthamoeba castellanii str. Neff	14923212
ACA1_251760	mRNA	ACA1_251760	NW_004457618.1	108286	110197	D	ACA1_251760	join(<108286..108405,108464..108650,108774..108855,109054..109193,109301..109407,109534..109657,109775..109837,109962..>110197)	Acanthamoeba castellanii str. Neff	14923213
ACA1_251770	mRNA	ACA1_251770	NW_004457618.1	111409	112556	D	ACA1_251770	join(<111409..111463,111545..111675,111759..112076,112176..>112556)	Acanthamoeba castellanii str. Neff	14923214
ACA1_251780	mRNA	ACA1_251780	NW_004457618.1	115901	117370	D	ACA1_251780	join(<115901..116131,116213..116418,116513..116798,116866..117077,117148..>117370)	Acanthamoeba castellanii str. Neff	14923215
ACA1_251790	mRNA	ACA1_251790	NW_004457618.1	118428	121215	R	ACA1_251790	complement(join(<118428..118528,118621..118705,118781..118888,118988..119067,119140..119374,119482..119582,119666..119786,119869..119950,120037..120122,120192..120242,120378..120490,120581..120698,120770..120871,121150..>121215))	Acanthamoeba castellanii str. Neff	14923216
ACA1_251800	mRNA	ACA1_251800	NW_004457618.1	121466	123689	D	ACA1_251800	join(<121466..121613,121725..121906,122058..122196,122339..122422,122533..122657,122740..122962,123126..123253,123339..123489,123592..>123689)	Acanthamoeba castellanii str. Neff	14923217
ACA1_251810	mRNA	ACA1_251810	NW_004457618.1	123818	124184	R	ACA1_251810	complement(join(<123818..123980,124060..>124184))	Acanthamoeba castellanii str. Neff	14923218
ACA1_251920	mRNA	ACA1_251920	NW_004457618.1	125099	125505	R	ACA1_251920	complement(join(<125099..125199,125294..125378,125452..>125505))	Acanthamoeba castellanii str. Neff	14923219
ACA1_252030	mRNA	ACA1_252030	NW_004457618.1	126411	130887	D	ACA1_252030	join(<126411..126452,126595..126770,126845..126962,127265..127666,127777..127877,127968..128104,128197..128266,128418..128498,128575..128698,128789..128918,129025..129110,129207..129307,129400..129577,129691..129810,129889..129999,130130..130334,130413..130570,130660..>130887)	Acanthamoeba castellanii str. Neff	14923220
ACA1_252040	mRNA	ACA1_252040	NW_004457618.1	131008	131596	R	ACA1_252040	complement(join(<131008..131155,131231..131484,131564..>131596))	Acanthamoeba castellanii str. Neff	14923221
ACA1_252050	mRNA	ACA1_252050	NW_004457618.1	132043	132237	R	ACA1_252050	complement(<132043..>132237)	Acanthamoeba castellanii str. Neff	14923222
ACA1_252060	mRNA	ACA1_252060	NW_004457618.1	132754	136449	D	ACA1_252060	join(<132754..132828,132889..132945,133034..133247,133432..133582,133661..133782,133872..133962,134867..134945,135022..135201,135358..135698,135784..135833,135948..136045,136143..136285,136350..>136449)	Acanthamoeba castellanii str. Neff	14923223
ACA1_252170	mRNA	ACA1_252170	NW_004457618.1	136553	138173	R	ACA1_252170	complement(join(<136553..136699,136789..136887,136951..137079,137242..137334,137543..137864,137932..>138173))	Acanthamoeba castellanii str. Neff	14923224
ACA1_252180	mRNA	ACA1_252180	NW_004457618.1	138458	140298	D	ACA1_252180	join(<138458..138852,138972..139549,139615..139681,139748..139838,139927..140012,140072..140255,140266..>140298)	Acanthamoeba castellanii str. Neff	14923225
ACA1_252190	mRNA	ACA1_252190	NW_004457618.1	140822	141766	R	ACA1_252190	complement(join(<140822..141133,141224..141517,141590..>141766))	Acanthamoeba castellanii str. Neff	14923226
ACA1_252200	mRNA	ACA1_252200	NW_004457618.1	142217	143012	D	ACA1_252200	join(<142217..142514,142613..142883,142955..>143012)	Acanthamoeba castellanii str. Neff	14923227
ACA1_252210	mRNA	ACA1_252210	NW_004457618.1	143603	146873	D	ACA1_252210	join(<143603..143683,143760..143876,144032..144155,144196..144415,144483..144673,144771..145140,145231..145823,145908..146037,146164..146231,146297..146383,146466..146564,146643..146713,146802..>146873)	Acanthamoeba castellanii str. Neff	14923228
ACA1_252320	mRNA	ACA1_252320	NW_004457618.1	149945	150801	R	ACA1_252320	complement(join(<149945..150199,150454..150677,150756..>150801))	Acanthamoeba castellanii str. Neff	14923229
ACA1_252440	mRNA	ACA1_252440	NW_004457618.1	151912	152853	R	ACA1_252440	complement(<151912..>152853)	Acanthamoeba castellanii str. Neff	14923231
ACA1_252450	mRNA	ACA1_252450	NW_004457618.1	153454	154692	D	ACA1_252450	join(<153454..153620,153702..153800,153947..154080,154184..154387,154502..>154692)	Acanthamoeba castellanii str. Neff	14923232
ACA1_252460	mRNA	ACA1_252460	NW_004457618.1	154800	156882	R	ACA1_252460	complement(join(<154800..154945,155048..155307,155408..155529,155617..155684,155784..155905,156012..156158,156208..156364,156441..156492,156625..>156882))	Acanthamoeba castellanii str. Neff	14923233
ACA1_252470	mRNA	ACA1_252470	NW_004457618.1	157188	158546	D	ACA1_252470	join(<157188..157390,157463..157473,157484..157840,157924..158069,158144..158261,158347..>158546)	Acanthamoeba castellanii str. Neff	14923234
ACA1_252480	mRNA	ACA1_252480	NW_004457618.1	158601	159742	R	ACA1_252480	complement(join(<158601..158881,158991..159106,159192..159258,159350..159453,159591..>159742))	Acanthamoeba castellanii str. Neff	14923235
ACA1_252490	mRNA	ACA1_252490	NW_004457618.1	160572	164092	R	ACA1_252490	complement(join(<160572..160711,160758..161021,161108..161237,161343..161414,161486..161575,161674..161774,161915..162372,162465..162652,162854..162955,163105..163316,163417..163534,163690..163830,163982..>164092))	Acanthamoeba castellanii str. Neff	14923236
ACA1_252500	mRNA	ACA1_252500	NW_004457618.1	164669	164967	D	ACA1_252500	join(<164669..164854,164917..>164967)	Acanthamoeba castellanii str. Neff	14923237
ACA1_252510	mRNA	ACA1_252510	NW_004457618.1	165085	166416	R	ACA1_252510	complement(join(<165085..165980,166129..166212,166287..>166416))	Acanthamoeba castellanii str. Neff	14923238
ACA1_252520	mRNA	ACA1_252520	NW_004457618.1	166668	170749	R	ACA1_252520	complement(join(<166668..166982,167063..169935,170026..170176,170429..>170749))	Acanthamoeba castellanii str. Neff	14923239
ACA1_252530	mRNA	ACA1_252530	NW_004457618.1	172157	175345	D	ACA1_252530	join(<172157..172267,172357..172497,172595..172718,172834..172876,172980..173148,173260..173407,173485..173689,173811..174025,174125..174246,174326..174433,174498..174569,174667..174799,174874..175000,175113..175248,175340..>175345)	Acanthamoeba castellanii str. Neff	14923240
ACA1_252540	mRNA	ACA1_252540	NW_004457618.1	175578	177086	R	ACA1_252540	complement(join(<175578..175658,175722..175747,175868..176023,176106..176270,176390..176575,176654..>177086))	Acanthamoeba castellanii str. Neff	14923241
ACA1_252550	mRNA	ACA1_252550	NW_004457618.1	177205	180674	R	ACA1_252550	complement(join(<177205..177461,177583..177675,177749..177988,178066..178155,178276..178467,178560..178845,178945..179034,179101..179319,179465..179563,179652..179887,179963..180091,180153..180244,180511..>180674))	Acanthamoeba castellanii str. Neff	14923242
ACA1_252560	mRNA	ACA1_252560	NW_004457618.1	181612	182684	D	ACA1_252560	join(<181612..181722,181800..>182684)	Acanthamoeba castellanii str. Neff	14923243
ACA1_252570	mRNA	ACA1_252570	NW_004457618.1	183007	184538	D	ACA1_252570	join(<183007..183159,183222..183313,183383..183489,183559..183686,183753..183832,183891..184026,184102..184221,184288..184361,184433..>184538)	Acanthamoeba castellanii str. Neff	14923244
ACA1_252580	mRNA	ACA1_252580	NW_004457618.1	184646	186317	D	ACA1_252580	join(<184646..184710,184801..184879,184942..185021,185102..185195,185269..185303,185508..185628,185738..185863,185939..186052,186141..>186317)	Acanthamoeba castellanii str. Neff	14923245
ACA1_252590	mRNA	ACA1_252590	NW_004457618.1	186457	187462	R	ACA1_252590	complement(join(<186457..186516,186627..186735,186822..186890,186960..>187462))	Acanthamoeba castellanii str. Neff	14923246
ACA1_252600	mRNA	ACA1_252600	NW_004457618.1	187603	188364	D	ACA1_252600	join(<187603..187719,187977..188080,188173..188284,188317..>188364)	Acanthamoeba castellanii str. Neff	14923247
ACA1_252610	mRNA	ACA1_252610	NW_004457618.1	188526	190505	R	ACA1_252610	complement(join(<188526..188656,188735..188867,188967..189232,189316..189373,189501..189600,189719..189849,189948..190102,190199..>190505))	Acanthamoeba castellanii str. Neff	14923248
ACA1_252620	mRNA	ACA1_252620	NW_004457618.1	190967	194079	D	ACA1_252620	join(<190967..191027,191134..191155,191168..191289,191404..191717,191797..191957,192032..192156,192263..192486,192562..192766,192826..192930,193025..193131,193263..193526,193630..>194079)	Acanthamoeba castellanii str. Neff	14923249
ACA1_252630	mRNA	ACA1_252630	NW_004457618.1	195668	197651	R	ACA1_252630	complement(join(<195668..195720,195751..196087,196191..196315,196401..196523,196592..196598,197118..>197651))	Acanthamoeba castellanii str. Neff	14923250
ACA1_252740	mRNA	ACA1_252740	NW_004457618.1	198468	199355	R	ACA1_252740	complement(join(<198468..198538,198569..198905,198995..199119,199211..>199355))	Acanthamoeba castellanii str. Neff	14923251
ACA1_252750	mRNA	ACA1_252750	NW_004457618.1	201187	203088	D	ACA1_252750	join(<201187..202591,202685..202761,202864..>203088)	Acanthamoeba castellanii str. Neff	14923252
ACA1_252760	mRNA	ACA1_252760	NW_004457618.1	203818	204195	D	ACA1_252760	join(<203818..203886,203953..>204195)	Acanthamoeba castellanii str. Neff	14923253
ACA1_252770	mRNA	ACA1_252770	NW_004457618.1	204922	207022	R	ACA1_252770	complement(join(<204922..205098,205182..205342,205435..205539,205622..205766,205863..205961,206051..206232,206326..206448,206540..206652,206754..>207022))	Acanthamoeba castellanii str. Neff	14923254
ACA1_252780	mRNA	ACA1_252780	NW_004457618.1	207310	209102	R	ACA1_252780	complement(join(<207310..207746,207764..208290,208540..>209102))	Acanthamoeba castellanii str. Neff	14923255
ACA1_252800	mRNA	ACA1_252800	NW_004457618.1	213276	220726	D	ACA1_252800	join(<213276..213354,213475..213501,213595..213652,213755..213799,213903..214017,214125..214292,214382..214477,214562..214628,214705..214757,214833..214940,215029..215116,215292..215836,215958..216844,216943..217244,217317..218055,218133..218357,218448..218507,218525..218537,218659..219282,219350..219440,219526..220260,220347..>220726)	Acanthamoeba castellanii str. Neff	14923257
ACA1_252810	mRNA	ACA1_252810	NW_004457618.1	220826	222519	R	ACA1_252810	complement(join(<220826..220964,221022..221077,221146..221238,221361..221521,221744..221836,221982..222022,222033..222081,222186..222299,222381..>222519))	Acanthamoeba castellanii str. Neff	14923258
ACA1_252820	mRNA	ACA1_252820	NW_004457618.1	222670	224516	R	ACA1_252820	complement(join(<222670..223601,223670..223750,223848..224336,224375..>224516))	Acanthamoeba castellanii str. Neff	14923259
ACA1_252830	mRNA	ACA1_252830	NW_004457618.1	225216	226588	R	ACA1_252830	complement(join(<225216..226429,226531..>226588))	Acanthamoeba castellanii str. Neff	14923260
ACA1_252840	mRNA	ACA1_252840	NW_004457618.1	227103	228639	R	ACA1_252840	complement(join(<227103..227159,227227..227345,227399..227440,227482..227536,227654..227787,227826..227905,228431..>228639))	Acanthamoeba castellanii str. Neff	14923261
ACA1_252850	mRNA	ACA1_252850	NW_004457618.1	228797	231129	D	ACA1_252850	join(<228797..228904,228972..229040,229143..229196,229227..229396,229511..229592,229721..229953,230038..230191,230293..>231129)	Acanthamoeba castellanii str. Neff	14923262
ACA1_252860	mRNA	ACA1_252860	NW_004457618.1	231192	231734	R	ACA1_252860	complement(<231192..>231734)	Acanthamoeba castellanii str. Neff	14923263
ACA1_252870	mRNA	ACA1_252870	NW_004457618.1	231931	233595	R	ACA1_252870	complement(join(<231931..232114,232215..232270,232352..232441,232546..232725,232811..233239,233407..>233595))	Acanthamoeba castellanii str. Neff	14923264
ACA1_252880	mRNA	ACA1_252880	NW_004457618.1	233749	237960	R	ACA1_252880	complement(join(<233749..233769,233865..233963,234087..234152,234244..234331,234449..234534,234617..234734,234822..234900,234991..235066,235146..235240,235253..235397,235632..235700,235795..235864,235960..236025,236289..236410,236489..236600,236671..236801,236861..236956,237255..237334,237436..237511,237591..237685,237698..237842,237931..>237960))	Acanthamoeba castellanii str. Neff	14923265
ACA1_253090	mRNA	ACA1_253090	NW_004457618.1	238445	239851	D	ACA1_253090	join(<238445..238677,238752..238883,238999..>239851)	Acanthamoeba castellanii str. Neff	14923266
ACA1_253100	mRNA	ACA1_253100	NW_004457618.1	239986	242686	R	ACA1_253100	complement(join(<239986..240012,240119..240215,240305..240457,240569..240633,240704..240768,240863..240983,241127..241210,241344..241410,241539..241863,241936..242026,242131..242223,242412..242489,242585..>242686))	Acanthamoeba castellanii str. Neff	14923267
ACA1_253110	mRNA	ACA1_253110	NW_004457618.1	243013	244727	D	ACA1_253110	join(<243013..243139,243228..243361,243486..243535,243619..243679,243790..243905,243994..244087,244223..244300,244388..244487,244561..>244727)	Acanthamoeba castellanii str. Neff	14923268
ACA1_253120	mRNA	ACA1_253120	NW_004457618.1	244889	247776	R	ACA1_253120	complement(join(<244889..245155,245236..245387,245493..245603,245680..245751,245851..245976,246074..246172,246255..246365,246455..246575,246705..246802,246891..247190,247279..247431,247596..>247776))	Acanthamoeba castellanii str. Neff	14923269
ACA1_253130	mRNA	ACA1_253130	NW_004457618.1	248174	249516	D	ACA1_253130	join(<248174..248217,248341..248468,248625..248722,248837..249044,249139..249237,249344..>249516)	Acanthamoeba castellanii str. Neff	14923270
ACA1_253140	mRNA	ACA1_253140	NW_004457618.1	249591	250691	R	ACA1_253140	complement(join(<249591..250288,250382..>250691))	Acanthamoeba castellanii str. Neff	14923271
ACA1_253150	mRNA	ACA1_253150	NW_004457618.1	251310	252565	D	ACA1_253150	join(<251310..251370,251456..251528,251577..251665,251887..251952,252042..252136,252209..252298,252368..>252565)	Acanthamoeba castellanii str. Neff	14923272
ACA1_253160	mRNA	ACA1_253160	NW_004457618.1	253159	263690	D	ACA1_253160	join(<253159..253345,253429..253746,253812..253996,254077..254267,254352..254548,254629..254997,255088..255534,255627..255707,255801..256082,256311..256745,256855..257125,257214..257327,257415..257753,257925..258035,258119..258207,258278..258385,258473..258578,258667..258774,258868..259201,259306..259388,259468..259751,259837..259889,260001..260092,260190..260337,260437..260563,260825..260966,261043..261209,261344..261520,261615..261757,261869..261956,262059..262116,262135..262236,262317..262974,263076..>263690)	Acanthamoeba castellanii str. Neff	14923273
ACA1_253170	mRNA	ACA1_253170	NW_004457618.1	264276	266033	R	ACA1_253170	complement(join(<264276..264411,264534..264639,264762..264828,264969..265126,265258..265420,265551..265730,265890..>266033))	Acanthamoeba castellanii str. Neff	14923274
ACA1_253180	mRNA	ACA1_253180	NW_004457618.1	266831	267918	R	ACA1_253180	complement(join(<266831..266947,267033..267586,267654..>267918))	Acanthamoeba castellanii str. Neff	14923275
ACA1_253190	mRNA	ACA1_253190	NW_004457618.1	268130	269345	R	ACA1_253190	complement(join(<268130..268225,268287..268397,268566..268739,268866..269054,269202..>269345))	Acanthamoeba castellanii str. Neff	14923276
ACA1_253200	mRNA	ACA1_253200	NW_004457618.1	270295	271272	D	ACA1_253200	join(<270295..271069,271214..>271272)	Acanthamoeba castellanii str. Neff	14923277
ACA1_253310	mRNA	ACA1_253310	NW_004457618.1	271360	271681	R	ACA1_253310	complement(join(<271360..271455,271523..>271681))	Acanthamoeba castellanii str. Neff	14923278
ACA1_253320	mRNA	ACA1_253320	NW_004457618.1	271994	273787	D	ACA1_253320	join(<271994..272056,272164..272341,272468..272650,272718..272831,272951..273094,273207..273295,273363..273517,273637..>273787)	Acanthamoeba castellanii str. Neff	14923279
ACA1_253330	mRNA	ACA1_253330	NW_004457618.1	273887	275877	R	ACA1_253330	complement(join(<273887..274960,275022..275152,275307..275541,275672..275780,275858..>275877))	Acanthamoeba castellanii str. Neff	14923280
ACA1_253340	mRNA	ACA1_253340	NW_004457618.1	276562	277553	R	ACA1_253340	complement(join(<276562..276701,276838..276957,277042..277303,277437..>277553))	Acanthamoeba castellanii str. Neff	14923281
ACA1_253350	mRNA	ACA1_253350	NW_004457618.1	277869	283155	R	ACA1_253350	complement(join(<277869..278971,279129..279473,279572..279778,279878..279991,280100..280211,280300..280355,280428..280503,280640..280816,280871..280978,281083..281231,281323..281468,281542..281732,281838..281991,282066..282109,282197..282325,282462..282639,282782..282861,282961..>283155))	Acanthamoeba castellanii str. Neff	14923282
ACA1_253360	mRNA	ACA1_253360	NW_004457618.1	284425	285730	D	ACA1_253360	join(<284425..284541,284624..284669,284797..284886,284970..285101,285268..285419,285590..>285730)	Acanthamoeba castellanii str. Neff	14923283
ACA1_253370	mRNA	ACA1_253370	NW_004457618.1	286812	288065	D	ACA1_253370	<286812..>288065	Acanthamoeba castellanii str. Neff	14923284
ACA1_253380	mRNA	ACA1_253380	NW_004457618.1	288416	289279	D	ACA1_253380	join(<288416..288513,288613..288685,288806..288850,288923..289028,289096..289118,289250..>289279)	Acanthamoeba castellanii str. Neff	14923285
ACA1_253390	mRNA	ACA1_253390	NW_004457618.1	289440	291326	D	ACA1_253390	join(<289440..289509,289584..289621,289767..289821,289863..290462,290577..290660,290734..>291326)	Acanthamoeba castellanii str. Neff	14923286
ACA1_253400	mRNA	ACA1_253400	NW_004457618.1	291955	292725	R	ACA1_253400	complement(<291955..>292725)	Acanthamoeba castellanii str. Neff	14923287
ACA1_253410	mRNA	ACA1_253410	NW_004457618.1	293397	294108	D	ACA1_253410	join(<293397..293559,293652..293763,293847..>294108)	Acanthamoeba castellanii str. Neff	14923288
ACA1_253430	mRNA	ACA1_253430	NW_004457618.1	296561	300176	R	ACA1_253430	complement(join(<296561..296810,296910..297038,297125..297264,297343..297646,297657..298102,298189..298502,298589..298684,298779..299223,299556..>300176))	Acanthamoeba castellanii str. Neff	14923290
ACA1_253440	mRNA	ACA1_253440	NW_004457618.1	300753	302307	D	ACA1_253440	join(<300753..301016,301096..301215,301328..301384,301502..301646,301766..301896,302053..302151,302239..>302307)	Acanthamoeba castellanii str. Neff	14923291
ACA1_253450	mRNA	ACA1_253450	NW_004457618.1	302635	308634	D	ACA1_253450	join(<302635..302832,303066..303149,303248..303325,303419..303511,303619..303688,303794..303885,304060..304161,304243..304283,304374..304574,304700..304818,304897..304978,305071..305119,305226..305304,305370..305484,305550..305614,305725..305834,305934..306183,306335..306414,306459..306575,306728..306935,307013..307147,307290..307372,307452..307523,307647..307761,307847..307974,308077..308164,308264..308437,308522..>308634)	Acanthamoeba castellanii str. Neff	14923292
ACA1_253460	mRNA	ACA1_253460	NW_004457618.1	308701	309371	R	ACA1_253460	complement(join(<308701..309128,309239..>309371))	Acanthamoeba castellanii str. Neff	14923293
ACA1_253470	mRNA	ACA1_253470	NW_004457618.1	309639	310595	R	ACA1_253470	complement(join(<309639..310001,310092..310262,310350..>310595))	Acanthamoeba castellanii str. Neff	14923294
ACA1_253480	mRNA	ACA1_253480	NW_004457618.1	311357	314130	R	ACA1_253480	complement(join(<311357..311461,311558..311673,311784..311907,312016..312114,312244..312330,312421..312468,312511..312523,312606..312845,312946..313058,313170..313244,313350..313422,313517..313629,313711..313815,313890..313969,314043..>314130))	Acanthamoeba castellanii str. Neff	14923295
ACA1_253490	mRNA	ACA1_253490	NW_004457618.1	315228	315720	D	ACA1_253490	join(<315228..315380,315440..315529,315604..>315720)	Acanthamoeba castellanii str. Neff	14923296
ACA1_253500	mRNA	ACA1_253500	NW_004457618.1	316095	317363	D	ACA1_253500	<316095..>317363	Acanthamoeba castellanii str. Neff	14923297
ACA1_253510	mRNA	ACA1_253510	NW_004457618.1	317547	318979	R	ACA1_253510	complement(join(<317547..317746,317833..317933,318050..318445,318666..318732,318798..318835,318903..>318979))	Acanthamoeba castellanii str. Neff	14923298
ACA1_253620	mRNA	ACA1_253620	NW_004457618.1	320761	321000	D	ACA1_253620	<320761..>321000	Acanthamoeba castellanii str. Neff	14923299
ACA1_253630	mRNA	ACA1_253630	NW_004457618.1	321469	323602	D	ACA1_253630	join(<321469..321701,321788..321950,322354..322430,322575..323003,323272..323344,323453..>323602)	Acanthamoeba castellanii str. Neff	14923300
ACA1_253640	mRNA	ACA1_253640	NW_004457618.1	323679	325520	D	ACA1_253640	<323679..>325520	Acanthamoeba castellanii str. Neff	14923301
ACA1_253650	mRNA	ACA1_253650	NW_004457618.1	325741	326988	R	ACA1_253650	complement(<325741..>326988)	Acanthamoeba castellanii str. Neff	14923302
ACA1_253660	mRNA	ACA1_253660	NW_004457618.1	327327	329696	R	ACA1_253660	complement(join(<327327..327418,327516..327576,327742..327819,327937..328069,328147..328303,328358..328484,328588..328740,328863..328952,329109..329217,329320..329519,329604..>329696))	Acanthamoeba castellanii str. Neff	14923303
ACA1_253670	mRNA	ACA1_253670	NW_004457618.1	329803	330958	R	ACA1_253670	complement(join(<329803..330041,330181..>330958))	Acanthamoeba castellanii str. Neff	14923304
ACA1_253680	mRNA	ACA1_253680	NW_004457618.1	331313	332526	R	ACA1_253680	complement(join(<331313..331542,331604..331808,331892..331980,332121..>332526))	Acanthamoeba castellanii str. Neff	14923305
ACA1_253690	mRNA	ACA1_253690	NW_004457618.1	333156	334124	D	ACA1_253690	join(<333156..333246,333317..333350,333479..333556,333645..333713,333856..333964,334056..>334124)	Acanthamoeba castellanii str. Neff	14923306
ACA1_253700	mRNA	ACA1_253700	NW_004457618.1	334412	336595	D	ACA1_253700	join(<334412..334788,334882..335087,335296..335402,335502..335634,335724..336146,336254..336315,336389..>336595)	Acanthamoeba castellanii str. Neff	14923307
ACA1_253710	mRNA	ACA1_253710	NW_004457618.1	337113	339160	D	ACA1_253710	join(<337113..337172,337404..337551,337654..337701,337813..337908,337994..338074,338138..338204,338266..338377,338438..338575,338642..338731,338801..338907,338968..>339160)	Acanthamoeba castellanii str. Neff	14923308
ACA1_253720	mRNA	ACA1_253720	NW_004457618.1	340656	342337	D	ACA1_253720	join(<340656..340761,340988..341052,341135..341492,341565..341980,342095..>342337)	Acanthamoeba castellanii str. Neff	14923309
ACA1_253730	mRNA	ACA1_253730	NW_004457618.1	342777	343389	D	ACA1_253730	join(<342777..342883,343050..>343389)	Acanthamoeba castellanii str. Neff	14923310
ACA1_253840	mRNA	ACA1_253840	NW_004457618.1	344085	344651	D	ACA1_253840	<344085..>344651	Acanthamoeba castellanii str. Neff	14923311
ACA1_253850	mRNA	ACA1_253850	NW_004457618.1	345398	348663	D	ACA1_253850	join(<345398..346090,346169..346235,346342..346478,346529..346770,346850..347111,347198..347452,347511..347659,347740..347791,347914..348000,348096..348174,348266..348392,348480..>348663)	Acanthamoeba castellanii str. Neff	14923312
ACA1_253960	mRNA	ACA1_253960	NW_004457618.1	348896	350802	R	ACA1_253960	complement(join(<348896..349093,349207..349337,349409..349520,349594..349793,349881..349970,350052..350143,350228..350285,350373..350408,350542..>350802))	Acanthamoeba castellanii str. Neff	14923313
ACA1_253970	mRNA	ACA1_253970	NW_004457618.1	350961	355829	R	ACA1_253970	complement(join(<350961..351106,351248..351421,351527..351754,351857..351976,352066..352206,352301..352531,352609..352712,352786..352915,352997..353122,353223..353342,353414..353503,353630..353650,353739..353861,353956..354062,354221..354443,354530..354638,354692..354739,354793..354829,354865..354964,355055..355175,355259..355422,355811..>355829))	Acanthamoeba castellanii str. Neff	14923314
ACA1_253980	mRNA	ACA1_253980	NW_004457618.1	357196	357994	R	ACA1_253980	complement(join(<357196..357224,357475..>357994))	Acanthamoeba castellanii str. Neff	14923315
ACA1_253990	mRNA	ACA1_253990	NW_004457618.1	358812	359400	R	ACA1_253990	complement(join(<358812..359045,359197..>359400))	Acanthamoeba castellanii str. Neff	14923316
ACA1_254000	mRNA	ACA1_254000	NW_004457618.1	359920	360159	R	ACA1_254000	complement(<359920..>360159)	Acanthamoeba castellanii str. Neff	14923317
ACA1_254010	mRNA	ACA1_254010	NW_004457618.1	361537	362862	D	ACA1_254010	<361537..>362862	Acanthamoeba castellanii str. Neff	14923318
ACA1_254020	mRNA	ACA1_254020	NW_004457618.1	363123	365176	D	ACA1_254020	join(<363123..363335,363495..364092,364182..364244,364380..>365176)	Acanthamoeba castellanii str. Neff	14923319
ACA1_254030	mRNA	ACA1_254030	NW_004457618.1	365477	366657	R	ACA1_254030	complement(join(<365477..365563,365680..365828,365911..365965,366047..366253,366356..366496,366604..>366657))	Acanthamoeba castellanii str. Neff	14923320
ACA1_254040	mRNA	ACA1_254040	NW_004457618.1	366895	369146	R	ACA1_254040	complement(join(<366895..367240,368055..368108,368204..368395,368490..368578,368655..>369146))	Acanthamoeba castellanii str. Neff	14923321
ACA1_254150	mRNA	ACA1_254150	NW_004457618.1	369357	372351	D	ACA1_254150	join(<369357..370186,371982..372093,372208..>372351)	Acanthamoeba castellanii str. Neff	14923322
ACA1_254260	mRNA	ACA1_254260	NW_004457618.1	374533	375320	R	ACA1_254260	complement(join(<374533..374637,374997..375178,375275..>375320))	Acanthamoeba castellanii str. Neff	14923323
ACA1_254270	mRNA	ACA1_254270	NW_004457618.1	376044	378483	R	ACA1_254270	complement(join(<376044..376369,376397..376496,376782..376823,376921..377076,377147..377254,377326..377543,377604..377691,377772..378000,378110..>378483))	Acanthamoeba castellanii str. Neff	14923324
ACA1_254380	mRNA	ACA1_254380	NW_004457618.1	378901	379368	R	ACA1_254380	complement(<378901..>379368)	Acanthamoeba castellanii str. Neff	14923325
ACA1_254390	mRNA	ACA1_254390	NW_004457618.1	379648	383315	R	ACA1_254390	complement(join(<379648..379943,380047..380236,380388..380530,380728..380854,380985..381061,381176..381234,381308..381395,381508..381723,381872..382026,382133..382250,382418..382688,382896..383054,383235..>383315))	Acanthamoeba castellanii str. Neff	14923326
ACA1_254400	mRNA	ACA1_254400	NW_004457618.1	383594	386928	D	ACA1_254400	join(<383594..383630,383743..384029,384121..384463,384548..384632,384742..384799,384909..385102,385285..385385,385518..385609,385726..385789,385867..385963,386052..386148,386274..386567,386665..>386928)	Acanthamoeba castellanii str. Neff	14923327
ACA1_254410	mRNA	ACA1_254410	NW_004457618.1	387062	387981	D	ACA1_254410	join(<387062..387125,387280..387542,387555..387774,387896..>387981)	Acanthamoeba castellanii str. Neff	14923328
ACA1_254420	mRNA	ACA1_254420	NW_004457618.1	388092	390075	R	ACA1_254420	complement(join(<388092..388175,388273..388734,388839..389486,389582..389707,389863..>390075))	Acanthamoeba castellanii str. Neff	14923329
ACA1_254430	mRNA	ACA1_254430	NW_004457618.1	390178	391504	D	ACA1_254430	join(<390178..390370,390580..390702,390782..390830,390959..391138,391228..391302,391414..>391504)	Acanthamoeba castellanii str. Neff	14923330
ACA1_254440	mRNA	ACA1_254440	NW_004457618.1	391594	393808	D	ACA1_254440	join(<391594..392029,392161..392335,392467..392726,392981..393110,393217..393322,393427..393587,393682..>393808)	Acanthamoeba castellanii str. Neff	14923331
ACA1_254450	mRNA	ACA1_254450	NW_004457618.1	393879	394735	R	ACA1_254450	complement(join(<393879..394505,394586..>394735))	Acanthamoeba castellanii str. Neff	14923332
ACA1_254570	mRNA	ACA1_254570	NW_004457618.1	397302	398163	R	ACA1_254570	complement(join(<397302..397346,397409..397561,397714..>398163))	Acanthamoeba castellanii str. Neff	14923334
ACA1_254680	mRNA	ACA1_254680	NW_004457618.1	399324	401537	R	ACA1_254680	complement(join(<399324..399449,399521..399715,399806..399891,399965..400123,400214..400427,400554..400674,400744..400815,400896..400980,401047..401193,401263..401380,401490..>401537))	Acanthamoeba castellanii str. Neff	14923335
ACA1_254690	mRNA	ACA1_254690	NW_004457618.1	402253	403992	D	ACA1_254690	<402253..>403992	Acanthamoeba castellanii str. Neff	14923336
ACA1_254700	mRNA	ACA1_254700	NW_004457618.1	403995	406635	D	ACA1_254700	join(<403995..405557,405679..405754,405847..405928,406036..406201,406304..406428,406524..>406635)	Acanthamoeba castellanii str. Neff	14923337
ACA1_254710	mRNA	ACA1_254710	NW_004457618.1	406766	410140	D	ACA1_254710	join(<406766..406833,406915..407098,407234..407319,407398..407526,407607..407655,407759..407925,408025..409535,409683..410044,410123..>410140)	Acanthamoeba castellanii str. Neff	14923338
ACA1_254720	mRNA	ACA1_254720	NW_004457618.1	410628	411863	R	ACA1_254720	complement(join(<410628..411010,411141..411195,411358..411590,411746..>411863))	Acanthamoeba castellanii str. Neff	14923339
ACA1_254730	mRNA	ACA1_254730	NW_004457618.1	412263	415962	R	ACA1_254730	complement(join(<412263..412430,412546..412719,412839..412940,413098..413163,413422..413619,413803..413938,414044..414168,414283..414442,414529..414574,414731..414825,414889..415131,415339..415437,415748..>415962))	Acanthamoeba castellanii str. Neff	14923340
ACA1_254740	mRNA	ACA1_254740	NW_004457618.1	416293	418762	R	ACA1_254740	complement(join(<416293..416409,416492..416622,416711..416737,417003..417121,417265..417352,417615..417755,417860..417923,418067..418217,418346..418392,418462..418637,418717..>418762))	Acanthamoeba castellanii str. Neff	14923341
ACA1_254850	mRNA	ACA1_254850	NW_004457618.1	419609	423523	D	ACA1_254850	join(<419609..419614,419726..419892,420024..420071,420214..420288,420410..420506,420661..420765,420917..420975,421091..421229,421301..421365,421479..421579,421808..421982,422074..422227,422312..422407,422525..422653,422767..422898,422986..423265,423375..>423523)	Acanthamoeba castellanii str. Neff	14923342
ACA1_254860	mRNA	ACA1_254860	NW_004457618.1	423930	425515	D	ACA1_254860	join(<423930..424061,424328..424594,424678..424762,424863..424956,425055..425119,425245..425317,425431..>425515)	Acanthamoeba castellanii str. Neff	14923343
ACA1_254870	mRNA	ACA1_254870	NW_004457618.1	426343	428121	R	ACA1_254870	complement(join(<426343..426488,426598..426685,426787..426935,427080..427169,427252..427436,427574..427713,427781..427867,428092..>428121))	Acanthamoeba castellanii str. Neff	14923344
ACA1_254880	mRNA	ACA1_254880	NW_004457618.1	428562	433565	R	ACA1_254880	complement(join(<428562..428682,428799..428931,429018..429183,429307..429462,429605..429768,429907..430090,430189..430320,430341..430371,430385..430514,430709..431007,431151..431274,431368..431492,431616..431776,431942..433139,433297..433327,433448..>433565))	Acanthamoeba castellanii str. Neff	14923345
ACA1_254890	mRNA	ACA1_254890	NW_004457618.1	434052	442263	R	ACA1_254890	complement(join(<434052..434374,434459..434558,434655..434860,434956..435284,435376..435623,435724..435970,436047..436135,436241..436431,436765..436851,436929..436995,437107..437312,437441..437591,437729..437887,437970..438086,438161..438326,438471..438567,438692..438829,438954..439057,439143..439182,439286..439548,439654..439754,439926..440129,440268..440347,440457..440603,440740..440855,440901..441087,441196..441376,441500..441646,441757..441910,442017..442110,442209..>442263))	Acanthamoeba castellanii str. Neff	14923346
ACA1_254900	mRNA	ACA1_254900	NW_004457618.1	443570	445413	D	ACA1_254900	join(<443570..443630,443713..443940,444035..444964,445093..445202,445324..>445413)	Acanthamoeba castellanii str. Neff	14923347
ACA1_254910	mRNA	ACA1_254910	NW_004457618.1	445496	446084	R	ACA1_254910	complement(join(<445496..445774,445881..>446084))	Acanthamoeba castellanii str. Neff	14923348
ACA1_254920	mRNA	ACA1_254920	NW_004457618.1	446361	451934	D	ACA1_254920	join(<446361..446402,446458..446520,446710..446881,446969..447200,447265..447370,447469..447590,447726..447858,447945..447983,448000..448234,448435..448628,448735..448845,448955..449038,449116..449324,449431..449574,449698..449800,450160..450229,450327..450426,450532..450584,450701..450781,450904..451410,451541..451692,451821..>451934)	Acanthamoeba castellanii str. Neff	14923349
ACA1_255030	mRNA	ACA1_255030	NW_004457618.1	452330	454267	R	ACA1_255030	complement(join(<452330..452430,452665..453340,453364..453425,453528..453728,453823..454018,454172..>454267))	Acanthamoeba castellanii str. Neff	14923350
ACA1_255140	mRNA	ACA1_255140	NW_004457618.1	454923	455300	R	ACA1_255140	complement(<454923..>455300)	Acanthamoeba castellanii str. Neff	14923351
ACA1_255150	mRNA	ACA1_255150	NW_004457618.1	455888	457010	D	ACA1_255150	join(<455888..455960,456157..456303,456454..456538,456637..456708,456830..>457010)	Acanthamoeba castellanii str. Neff	14923352
ACA1_255160	mRNA	ACA1_255160	NW_004457618.1	457166	457905	D	ACA1_255160	join(<457166..457304,457443..457555,457705..>457905)	Acanthamoeba castellanii str. Neff	14923353
ACA1_255170	mRNA	ACA1_255170	NW_004457618.1	458045	458825	R	ACA1_255170	complement(join(<458045..458523,458675..>458825))	Acanthamoeba castellanii str. Neff	14923354
ACA1_255190	mRNA	ACA1_255190	NW_004457618.1	460021	464102	R	ACA1_255190	complement(join(<460021..460136,460237..460951,461055..461126,461249..461350,461393..461533,461646..461794,461895..462006,462141..462293,462391..462457,462608..462785,462875..462980,463228..463351,463476..463652,463782..463823,463897..>464102))	Acanthamoeba castellanii str. Neff	14923356
ACA1_255200	mRNA	ACA1_255200	NW_004457618.1	464934	466963	R	ACA1_255200	complement(join(<464934..464982,465099..465183,465404..465517,465880..465958,466073..466218,466303..466373,466472..466509,466520..>466963))	Acanthamoeba castellanii str. Neff	14923357
ACA1_255210	mRNA	ACA1_255210	NW_004457618.1	467187	469054	D	ACA1_255210	join(<467187..467417,467604..467762,467829..468014,468089..468191,468255..468361,468446..468546,468675..468919,468981..>469054)	Acanthamoeba castellanii str. Neff	14923358
ACA1_255220	mRNA	ACA1_255220	NW_004457618.1	469392	470433	R	ACA1_255220	complement(join(<469392..469422,469529..469638,469763..469897,469972..470107,470228..>470433))	Acanthamoeba castellanii str. Neff	14923359
ACA1_255230	mRNA	ACA1_255230	NW_004457618.1	470644	471278	R	ACA1_255230	complement(join(<470644..470724,470922..471017,471144..>471278))	Acanthamoeba castellanii str. Neff	14923360
ACA1_255240	mRNA	ACA1_255240	NW_004457618.1	472247	473273	R	ACA1_255240	complement(join(<472247..472722,472865..>473273))	Acanthamoeba castellanii str. Neff	14923361
ACA1_255250	mRNA	ACA1_255250	NW_004457618.1	474170	475923	R	ACA1_255250	complement(join(<474170..475502,475697..>475923))	Acanthamoeba castellanii str. Neff	14923362
ACA1_255360	mRNA	ACA1_255360	NW_004457618.1	477882	479655	R	ACA1_255360	complement(join(<477882..477986,478079..478183,478314..478483,478582..478829,478906..478960,479075..479323,479416..479522,479604..>479655))	Acanthamoeba castellanii str. Neff	14923363
ACA1_255370	mRNA	ACA1_255370	NW_004457618.1	479919	481504	R	ACA1_255370	complement(join(<479919..480016,480136..480228,480308..480370,480475..480546,480630..480741,480808..480978,481055..481111,481295..>481504))	Acanthamoeba castellanii str. Neff	14923364
ACA1_255380	mRNA	ACA1_255380	NW_004457618.1	481617	483839	D	ACA1_255380	join(<481617..481806,481920..482014,482152..482224,482380..482504,482635..482782,482877..482932,483110..483309,483381..483592,483784..>483839)	Acanthamoeba castellanii str. Neff	14923365
ACA1_255390	mRNA	ACA1_255390	NW_004457618.1	484211	486051	D	ACA1_255390	join(<484211..484349,484437..484501,484677..484715,484834..484974,485118..485198,485274..485420,485498..485591,485659..485912,485983..>486051)	Acanthamoeba castellanii str. Neff	14923366
ACA1_255400	mRNA	ACA1_255400	NW_004457618.1	486120	487075	R	ACA1_255400	complement(join(<486120..486312,486480..486682,486744..486938,487004..>487075))	Acanthamoeba castellanii str. Neff	14923367
ACA1_255410	mRNA	ACA1_255410	NW_004457618.1	487614	494625	R	ACA1_255410	complement(join(<487614..487856,487934..488107,488193..488401,488478..488646,488744..489051,489130..489589,489782..489908,489681..489908,489997..490125,490204..490326,490386..490591,490663..490821,490896..491012,491101..491372,491436..491686,491783..491927,491996..492158,492227..492310,492419..492653,492683..492726,492792..492983,493195..493390,493464..493861,494084..494424,494544..>494625))	Acanthamoeba castellanii str. Neff	14923368
ACA1_255420	mRNA	ACA1_255420	NW_004457618.1	495011	496715	D	ACA1_255420	join(<495011..495732,495852..495952,496064..496221,496322..496475,496570..>496715)	Acanthamoeba castellanii str. Neff	14923369
ACA1_255430	mRNA	ACA1_255430	NW_004457618.1	496886	497761	R	ACA1_255430	complement(join(<496886..497015,497107..497215,497316..497420,497537..497620,497686..>497761))	Acanthamoeba castellanii str. Neff	14923370
ACA1_255440	mRNA	ACA1_255440	NW_004457618.1	498050	498780	D	ACA1_255440	join(<498050..498073,498106..498204,498370..498504,498598..>498780)	Acanthamoeba castellanii str. Neff	14923371
ACA1_255450	mRNA	ACA1_255450	NW_004457618.1	498948	501005	D	ACA1_255450	join(<498948..499091,499231..499354,499415..499513,499596..499711,499821..499966,500295..500402,500488..500684,500788..>501005)	Acanthamoeba castellanii str. Neff	14923372
ACA1_255460	mRNA	ACA1_255460	NW_004457618.1	504873	507664	R	ACA1_255460	complement(join(<504873..505546,505612..505924,506186..506243,506323..506399,506490..506629,506707..506815,506889..506936,507247..507347,507478..>507664))	Acanthamoeba castellanii str. Neff	14923373
ACA1_255480	mRNA	ACA1_255480	NW_004457618.1	509044	512320	D	ACA1_255480	join(<509044..509241,509343..509474,509485..509533,509593..509714,509807..509992,510111..510711,510790..510999,511082..511198,511308..511467,511606..511662,511743..511883,511968..512057,512161..>512320)	Acanthamoeba castellanii str. Neff	14923375
ACA1_255490	mRNA	ACA1_255490	NW_004457618.1	512606	515340	R	ACA1_255490	complement(join(<512606..512839,513002..513189,513308..513456,513555..513786,513873..513962,514037..514136,514250..514434,515085..>515340))	Acanthamoeba castellanii str. Neff	14923376
ACA1_255500	mRNA	ACA1_255500	NW_004457618.1	515443	517765	D	ACA1_255500	join(<515443..515504,515741..515873,516004..516049,516073..516154,516278..516358,516491..516558,516650..516757,516873..>517765)	Acanthamoeba castellanii str. Neff	14923377
ACA1_255510	mRNA	ACA1_255510	NW_004457618.1	517898	520782	R	ACA1_255510	complement(join(<517898..518002,518080..518187,518281..518525,518606..518731,518852..519043,519131..519251,519359..519457,519529..519585,519711..519797,519924..520231,520331..520410,520498..520630,520707..>520782))	Acanthamoeba castellanii str. Neff	14923378
ACA1_255530	mRNA	ACA1_255530	NW_004457618.1	533955	535582	R	ACA1_255530	complement(join(<533955..534087,534181..534405,534498..534584,534690..534754,534855..534979,535079..535138,535282..>535582))	Acanthamoeba castellanii str. Neff	14923380
ACA1_255540	mRNA	ACA1_255540	NW_004457618.1	536768	537404	D	ACA1_255540	join(<536768..537026,537091..>537404)	Acanthamoeba castellanii str. Neff	14923381
ACA1_255550	mRNA	ACA1_255550	NW_004457618.1	537940	539114	D	ACA1_255550	join(<537940..538071,538180..538311,538410..538477,538643..538759,538865..539002,539102..>539114)	Acanthamoeba castellanii str. Neff	14923382
ACA1_255660	mRNA	ACA1_255660	NW_004457618.1	539499	539834	R	ACA1_255660	complement(<539499..>539834)	Acanthamoeba castellanii str. Neff	14923383
ACA1_255670	mRNA	ACA1_255670	NW_004457618.1	540755	543236	D	ACA1_255670	join(<540755..540886,540986..541117,541229..541296,541460..541576,541687..541816,541922..542071,542229..542316,542426..542490,542588..542689,542795..542882,543004..>543236)	Acanthamoeba castellanii str. Neff	14923384
ACA1_255680	mRNA	ACA1_255680	NW_004457618.1	543429	544697	R	ACA1_255680	complement(<543429..>544697)	Acanthamoeba castellanii str. Neff	14923385
ACA1_255690	mRNA	ACA1_255690	NW_004457618.1	545791	546171	R	ACA1_255690	complement(join(<545791..545929,545996..>546171))	Acanthamoeba castellanii str. Neff	14923386
ACA1_255700	mRNA	ACA1_255700	NW_004457618.1	546386	546934	R	ACA1_255700	complement(<546386..>546934)	Acanthamoeba castellanii str. Neff	14923387
ACA1_255710	mRNA	ACA1_255710	NW_004457618.1	547183	549594	D	ACA1_255710	join(<547183..547250,547342..547428,547557..547719,547842..548007,548089..548148,548253..548585,548678..548892,548967..549049,549182..549330,549482..>549594)	Acanthamoeba castellanii str. Neff	14923388
ACA1_255720	mRNA	ACA1_255720	NW_004457618.1	549807	552747	D	ACA1_255720	join(<549807..549830,549906..550155,550325..550545,550792..551010,551129..551218,551283..551457,551551..551683,551737..551892,552043..552158,552261..552283,552378..552487,552603..>552747)	Acanthamoeba castellanii str. Neff	14923389
ACA1_255730	mRNA	ACA1_255730	NW_004457618.1	553258	558027	R	ACA1_255730	complement(join(<553258..554390,554535..554648,554764..554919,554999..555167,555230..556756,556884..557026,557139..557547,557650..>558027))	Acanthamoeba castellanii str. Neff	14923390
ACA1_255740	mRNA	ACA1_255740	NW_004457618.1	559329	559625	R	ACA1_255740	complement(<559329..>559625)	Acanthamoeba castellanii str. Neff	14923391
ACA1_255750	mRNA	ACA1_255750	NW_004457618.1	559808	563248	D	ACA1_255750	join(<559808..559883,559997..560191,560345..560406,560540..560587,560691..560812,560966..561071,561240..561351,561474..561617,561792..561918,562090..562221,562335..562502,562644..562737,562889..563041,563135..>563248)	Acanthamoeba castellanii str. Neff	14923392
ACA1_255760	mRNA	ACA1_255760	NW_004457618.1	563462	565014	D	ACA1_255760	join(<563462..563616,563727..563824,563935..564148,564312..564424,564588..564743,564857..>565014)	Acanthamoeba castellanii str. Neff	14923393
ACA1_255770	mRNA	ACA1_255770	NW_004457618.1	565860	571150	R	ACA1_255770	complement(join(<565860..565881,565938..566051,566198..566358,566530..566638,566782..566869,567063..567206,567425..567509,567707..567794,567985..568055,568140..568258,568446..568592,568754..568925,569022..569080,569172..569297,569658..569766,569853..569929,570121..570243,570254..570328,570359..570429,570588..570630,570803..570886,571072..>571150))	Acanthamoeba castellanii str. Neff	14923394
ACA1_255880	mRNA	ACA1_255880	NW_004457618.1	571698	572084	R	ACA1_255880	complement(join(<571698..571807,572006..>572084))	Acanthamoeba castellanii str. Neff	14923395
ACA1_255890	mRNA	ACA1_255890	NW_004457618.1	572370	575772	R	ACA1_255890	complement(join(<572370..572671,572783..572916,573166..573442,573483..573742,573892..573985,574132..574735,574836..575061,575265..575599,575629..>575772))	Acanthamoeba castellanii str. Neff	14923396
ACA1_255900	mRNA	ACA1_255900	NW_004457618.1	576530	579599	D	ACA1_255900	join(<576530..576727,576885..576990,577199..577327,577501..577549,577671..577887,578005..578188,578308..578449,578531..578618,578756..578870,579042..579178,579285..579424,579533..>579599)	Acanthamoeba castellanii str. Neff	14923397
ACA1_255910	mRNA	ACA1_255910	NW_004457618.1	579671	582315	R	ACA1_255910	complement(join(<579671..580572,580660..580776,581006..581136,581312..581427,581770..581959,582010..582022,582071..582122,582199..>582315))	Acanthamoeba castellanii str. Neff	14923398
ACA1_256020	mRNA	ACA1_256020	NW_004457618.1	583350	584389	R	ACA1_256020	complement(join(<583350..583360,583437..583534,583595..583797,583863..584111,584171..584247,584374..>584389))	Acanthamoeba castellanii str. Neff	14923399
ACA1_256130	mRNA	ACA1_256130	NW_004457618.1	587815	588003	R	ACA1_256130	complement(<587815..>588003)	Acanthamoeba castellanii str. Neff	14923400
ACA1_035240	mRNA	ACA1_035240	NW_004457617.1	2372	3729	D	ACA1_035240	join(<2372..2591,2669..2860,2957..3133,3251..>3729)	Acanthamoeba castellanii str. Neff	14923168
ACA1_035250	mRNA	ACA1_035250	NW_004457617.1	4620	6155	R	ACA1_035250	complement(join(<4620..5539,5630..5783,5973..>6155))	Acanthamoeba castellanii str. Neff	14923123
ACA1_035260	mRNA	ACA1_035260	NW_004457617.1	6972	8717	R	ACA1_035260	complement(join(<6972..7083,7301..7397,7471..7730,7813..7944,8036..8219,8435..>8717))	Acanthamoeba castellanii str. Neff	14923124
ACA1_035270	mRNA	ACA1_035270	NW_004457617.1	9064	10815	D	ACA1_035270	join(<9064..10602,10702..>10815)	Acanthamoeba castellanii str. Neff	14923125
ACA1_035280	mRNA	ACA1_035280	NW_004457617.1	10944	11723	R	ACA1_035280	complement(join(<10944..11029,11125..11293,11388..>11723))	Acanthamoeba castellanii str. Neff	14923126
ACA1_035290	mRNA	ACA1_035290	NW_004457617.1	11827	12231	R	ACA1_035290	complement(join(<11827..11923,11959..12037,12198..>12231))	Acanthamoeba castellanii str. Neff	14923127
ACA1_035300	mRNA	ACA1_035300	NW_004457617.1	12594	16356	D	ACA1_035300	join(<12594..12775,12879..12912,13032..13127,13205..13333,13428..13536,13635..13693,13851..13972,14125..14333,14430..14509,14578..14871,14960..15006,15094..15187,15297..15380,15478..15591,15641..15769,15943..16064,16131..>16356)	Acanthamoeba castellanii str. Neff	14923128
ACA1_035310	mRNA	ACA1_035310	NW_004457617.1	16534	19791	D	ACA1_035310	join(<16534..16638,16866..16976,17298..17353,17445..17527,17648..17774,17826..18003,18092..18171,18306..18421,18556..18702,18782..18879,18989..19168,19240..19335,19434..19584,19691..>19791)	Acanthamoeba castellanii str. Neff	14923129
ACA1_035320	mRNA	ACA1_035320	NW_004457617.1	20348	20623	D	ACA1_035320	<20348..>20623	Acanthamoeba castellanii str. Neff	14923130
ACA1_035330	mRNA	ACA1_035330	NW_004457617.1	20750	25279	R	ACA1_035330	complement(join(<20750..20864,20948..21032,21113..21289,21394..21650,21757..21823,21910..21997,22062..22200,22276..22385,22551..22654,22749..22838,22920..23023,23103..23209,23317..23418,23579..23763,23774..23802,23837..23912,24407..24499,24592..24646,24757..24839,24979..>25279))	Acanthamoeba castellanii str. Neff	14923131
ACA1_035340	mRNA	ACA1_035340	NW_004457617.1	25842	28733	D	ACA1_035340	join(<25842..25945,26029..26155,26390..26533,26636..26804,26930..27096,27189..27347,27459..27554,27669..27800,27929..28234,28324..28424,28556..>28733)	Acanthamoeba castellanii str. Neff	14923132
ACA1_035350	mRNA	ACA1_035350	NW_004457617.1	28874	33543	R	ACA1_035350	complement(join(<28874..29103,29203..29398,29542..29634,29749..29795,29873..29937,30070..30157,30326..30438,30519..31447,31517..31561,31673..32749,32840..32917,33019..33130,33248..>33543))	Acanthamoeba castellanii str. Neff	14923133
ACA1_035360	mRNA	ACA1_035360	NW_004457617.1	34295	34709	R	ACA1_035360	complement(join(<34295..34661,34681..>34709))	Acanthamoeba castellanii str. Neff	14923134
ACA1_035370	mRNA	ACA1_035370	NW_004457617.1	35402	37180	R	ACA1_035370	complement(join(<35402..35516,35661..35785,35884..35973,36056..36175,36278..36427,36578..36712,36832..36903,37076..>37180))	Acanthamoeba castellanii str. Neff	14923135
ACA1_035380	mRNA	ACA1_035380	NW_004457617.1	37786	38498	R	ACA1_035380	complement(join(<37786..37989,38105..38309,38452..>38498))	Acanthamoeba castellanii str. Neff	14923136
ACA1_035390	mRNA	ACA1_035390	NW_004457617.1	38755	40168	D	ACA1_035390	join(<38755..38808,38951..>40168)	Acanthamoeba castellanii str. Neff	14923137
ACA1_035400	mRNA	ACA1_035400	NW_004457617.1	40345	41923	D	ACA1_035400	join(<40345..40671,40763..40880,40961..41141,41216..41264,41337..41461,41527..41610,41697..41805,41900..>41923)	Acanthamoeba castellanii str. Neff	14923138
ACA1_035410	mRNA	ACA1_035410	NW_004457617.1	42307	42954	R	ACA1_035410	complement(<42307..>42954)	Acanthamoeba castellanii str. Neff	14923139
ACA1_035420	mRNA	ACA1_035420	NW_004457617.1	43692	46846	R	ACA1_035420	complement(join(<43692..43819,43928..44051,44152..44278,44424..44518,44607..44815,44950..45103,45196..45297,45407..45465,45576..45663,45778..45876,46045..46156,46286..46359,46487..>46846))	Acanthamoeba castellanii str. Neff	14923140
ACA1_035430	mRNA	ACA1_035430	NW_004457617.1	47153	47941	R	ACA1_035430	complement(join(<47153..47239,47385..47475,47567..47647,47724..47795,47883..>47941))	Acanthamoeba castellanii str. Neff	14923141
ACA1_035440	mRNA	ACA1_035440	NW_004457617.1	47982	50818	R	ACA1_035440	complement(join(<47982..47988,48048..48529,48638..48739,48895..50499,50624..>50818))	Acanthamoeba castellanii str. Neff	14923142
ACA1_035450	mRNA	ACA1_035450	NW_004457617.1	50981	52685	R	ACA1_035450	complement(join(<50981..51132,51215..51404,51513..51579,51648..51799,51898..51986,52094..52260,52290..52400,52558..>52685))	Acanthamoeba castellanii str. Neff	14923143
ACA1_035460	mRNA	ACA1_035460	NW_004457617.1	54142	56908	D	ACA1_035460	join(<54142..54184,54292..54371,54598..54688,54798..54942,55055..55175,55292..55408,55556..55797,55950..56095,56223..56282,56379..56460,56560..56652,56728..>56908)	Acanthamoeba castellanii str. Neff	14923144
ACA1_035470	mRNA	ACA1_035470	NW_004457617.1	57347	61718	D	ACA1_035470	join(<57347..57801,57940..58044,58170..58258,58408..58560,58674..58885,58943..58982,59065..59220,59290..59366,59461..59620,59707..59840,59978..60048,60131..60224,60305..60392,60468..60546,60626..60703,60840..60933,61041..61217,61310..61432,61521..>61718)	Acanthamoeba castellanii str. Neff	14923145
ACA1_035480	mRNA	ACA1_035480	NW_004457617.1	61981	63868	D	ACA1_035480	join(<61981..62056,62159..62202,62274..62385,62482..62640,62766..62782,62808..62871,62973..63167,63350..63511,63584..63714,63797..>63868)	Acanthamoeba castellanii str. Neff	14923146
ACA1_035490	mRNA	ACA1_035490	NW_004457617.1	63982	74971	R	ACA1_035490	complement(join(<63982..64869,65009..65089,65239..65424,65519..65982,66090..66225,66379..66532,66644..66846,66955..67022,67172..67387,67450..67789,67855..68133,68186..68402,68523..68696,68773..68938,69092..69227,69362..69521,69629..69951,70072..70149,70253..70424,70513..70626,70725..70846,70951..71070,71162..71297,71433..71662,71779..72069,72163..72391,72470..72612,72720..72824,72911..72985,73069..73115,73180..73339,73440..73573,73727..73853,73971..74680,74827..>74971))	Acanthamoeba castellanii str. Neff	14923147
ACA1_035500	mRNA	ACA1_035500	NW_004457617.1	77490	77807	D	ACA1_035500	join(<77490..77539,77666..>77807)	Acanthamoeba castellanii str. Neff	14923148
ACA1_035510	mRNA	ACA1_035510	NW_004457617.1	78136	78696	R	ACA1_035510	complement(<78136..>78696)	Acanthamoeba castellanii str. Neff	14923149
ACA1_035520	mRNA	ACA1_035520	NW_004457617.1	79047	80629	R	ACA1_035520	complement(join(<79047..79128,79213..79305,79404..79491,79627..79781,79890..79990,80166..80288,80417..>80629))	Acanthamoeba castellanii str. Neff	14923150
ACA1_035530	mRNA	ACA1_035530	NW_004457617.1	81113	83274	R	ACA1_035530	complement(join(<81113..81190,81255..81452,81565..81641,81716..81961,82052..82165,82297..82383,82473..82559,82630..82691,82773..82828,82927..83055,83161..>83274))	Acanthamoeba castellanii str. Neff	14923151
ACA1_035540	mRNA	ACA1_035540	NW_004457617.1	83468	84148	R	ACA1_035540	complement(join(<83468..83659,83828..>84148))	Acanthamoeba castellanii str. Neff	14923152
ACA1_035550	mRNA	ACA1_035550	NW_004457617.1	84438	87446	R	ACA1_035550	complement(join(<84438..84580,84707..84922,85014..85172,85251..85349,85453..85605,85689..85795,85921..86014,86151..86301,86441..86581,86703..86855,86950..87179,87260..>87446))	Acanthamoeba castellanii str. Neff	14923153
ACA1_035560	mRNA	ACA1_035560	NW_004457617.1	87957	90834	R	ACA1_035560	complement(join(<87957..88134,88235..88360,88455..88600,88687..88757,88838..89206,89273..89316,89400..89634,89712..89864,89945..90049,90118..90235,90303..90432,90529..90576,90659..>90834))	Acanthamoeba castellanii str. Neff	14923154
ACA1_035570	mRNA	ACA1_035570	NW_004457617.1	90983	93379	R	ACA1_035570	complement(join(<90983..91544,91629..91798,91877..92227,92360..92560,92963..93140,93240..>93379))	Acanthamoeba castellanii str. Neff	14923155
ACA1_035580	mRNA	ACA1_035580	NW_004457617.1	93681	93930	D	ACA1_035580	join(<93681..93699,93770..>93930)	Acanthamoeba castellanii str. Neff	14923156
ACA1_035590	mRNA	ACA1_035590	NW_004457617.1	94105	97014	R	ACA1_035590	complement(join(<94105..94723,94853..95022,95121..95242,95326..95507,95607..95776,95894..96037,96140..96265,96354..96480,96587..>97014))	Acanthamoeba castellanii str. Neff	14923157
ACA1_035600	mRNA	ACA1_035600	NW_004457617.1	97473	97869	D	ACA1_035600	join(<97473..97530,97599..97717,97792..>97869)	Acanthamoeba castellanii str. Neff	14923158
ACA1_035610	mRNA	ACA1_035610	NW_004457617.1	98235	98782	D	ACA1_035610	join(<98235..98516,98666..>98782)	Acanthamoeba castellanii str. Neff	14923159
ACA1_035620	mRNA	ACA1_035620	NW_004457617.1	99382	99915	D	ACA1_035620	<99382..>99915	Acanthamoeba castellanii str. Neff	14923160
ACA1_035630	mRNA	ACA1_035630	NW_004457617.1	100162	101148	D	ACA1_035630	join(<100162..100226,100300..100501,100605..100721,100822..100882,100994..>101148)	Acanthamoeba castellanii str. Neff	14923161
ACA1_035640	mRNA	ACA1_035640	NW_004457617.1	101232	103843	R	ACA1_035640	complement(join(<101232..101470,101554..101627,101696..101858,101973..102171,102201..102338,102417..102553,102619..102748,102825..102936,103009..103091,103163..103277,103357..103520,103628..>103843))	Acanthamoeba castellanii str. Neff	14923162
ACA1_035650	mRNA	ACA1_035650	NW_004457617.1	104546	105846	D	ACA1_035650	join(<104546..105082,105355..>105846)	Acanthamoeba castellanii str. Neff	14923163
ACA1_035660	mRNA	ACA1_035660	NW_004457617.1	106552	107995	D	ACA1_035660	join(<106552..106854,107020..107091,107201..107252,107365..107502,107592..>107995)	Acanthamoeba castellanii str. Neff	14923164
ACA1_035770	mRNA	ACA1_035770	NW_004457617.1	108345	108712	R	ACA1_035770	complement(join(<108345..108426,108594..>108712))	Acanthamoeba castellanii str. Neff	14923165
ACA1_035780	mRNA	ACA1_035780	NW_004457617.1	108740	110498	R	ACA1_035780	complement(join(<108740..108884,108997..109144,109222..109356,109465..109586,109673..109774,109870..110006,110102..110169,110426..>110498))	Acanthamoeba castellanii str. Neff	14923166
ACA1_035790	mRNA	ACA1_035790	NW_004457617.1	115637	115926	D	ACA1_035790	join(<115637..115705,115798..>115926)	Acanthamoeba castellanii str. Neff	14923167
ACA1_125930	mRNA	ACA1_125930	NW_004457616.1	103	886	R	ACA1_125930	complement(join(<103..237,308..684,772..>886))	Acanthamoeba castellanii str. Neff	14923122
ACA1_125940	mRNA	ACA1_125940	NW_004457616.1	1290	5594	R	ACA1_125940	complement(join(<1290..1348,1448..1475,1507..1630,1725..1781,1876..1961,2048..2129,2192..2244,2346..2492,2632..2704,2778..2851,2943..3125,3196..3262,3350..3408,3505..3623,3700..3965,4067..4147,4232..4290,4386..4492,4566..4646,4751..4837,4937..5049,5147..5354,5480..>5594))	Acanthamoeba castellanii str. Neff	14923102
ACA1_125950	mRNA	ACA1_125950	NW_004457616.1	5812	7662	D	ACA1_125950	join(<5812..5853,5976..6024,6099..6206,6423..6570,6727..6813,6953..7001,7252..7315,7418..7440,7558..>7662)	Acanthamoeba castellanii str. Neff	14923101
ACA1_125960	mRNA	ACA1_125960	NW_004457616.1	7741	8504	R	ACA1_125960	complement(join(<7741..7929,8044..8291,8495..>8504))	Acanthamoeba castellanii str. Neff	14923091
ACA1_125970	mRNA	ACA1_125970	NW_004457616.1	8840	10129	R	ACA1_125970	complement(join(<8840..8973,9093..9425,9747..9800,9889..>10129))	Acanthamoeba castellanii str. Neff	14923092
ACA1_125980	mRNA	ACA1_125980	NW_004457616.1	10555	14052	R	ACA1_125980	complement(<10555..>14052)	Acanthamoeba castellanii str. Neff	14923093
ACA1_125990	mRNA	ACA1_125990	NW_004457616.1	15727	18750	R	ACA1_125990	complement(join(<15727..15782,15892..15980,16067..16153,16256..16319,16535..16630,16711..16902,17001..>18750))	Acanthamoeba castellanii str. Neff	14923094
ACA1_126000	mRNA	ACA1_126000	NW_004457616.1	19213	19425	D	ACA1_126000	join(<19213..19217,19236..>19425)	Acanthamoeba castellanii str. Neff	14923095
ACA1_126010	mRNA	ACA1_126010	NW_004457616.1	20229	20588	R	ACA1_126010	complement(<20229..>20588)	Acanthamoeba castellanii str. Neff	14923096
ACA1_126020	mRNA	ACA1_126020	NW_004457616.1	20956	22301	R	ACA1_126020	complement(join(<20956..21151,21585..21739,21786..21998,22092..>22301))	Acanthamoeba castellanii str. Neff	14923097
ACA1_126030	mRNA	ACA1_126030	NW_004457616.1	23335	27357	R	ACA1_126030	complement(join(<23335..23416,23499..23625,23711..23878,23968..24129,24217..24293,24366..24422,24516..24596,24681..24813,24899..24966,25053..25159,25240..25254,25325..25386,25474..25540,25626..25765,25836..25927,26128..26211,26301..26449,26537..26661,26735..26871,26948..27099,27205..27264,27310..>27357))	Acanthamoeba castellanii str. Neff	14923098
ACA1_126140	mRNA	ACA1_126140	NW_004457616.1	28291	30726	R	ACA1_126140	complement(join(<28291..28347,28359..28839,28908..29030,29104..30481,30603..>30726))	Acanthamoeba castellanii str. Neff	14923099
ACA1_126150	mRNA	ACA1_126150	NW_004457616.1	31164	32303	D	ACA1_126150	join(<31164..31366,31677..31705,31806..31843,31946..32019,32114..>32303)	Acanthamoeba castellanii str. Neff	14923100
ACA1_126170	mRNA	ACA1_126170	NW_004457616.1	36549	44207	D	ACA1_126170	join(<36549..36683,36729..36789,36877..36990,37144..37616,37745..37804,37850..37899,38145..38173,38253..38358,38428..38536,38600..38665,38720..38756,38862..39021,39071..39148,39270..39379,39594..39677,39773..40823,40887..40986,41060..41176,41395..41463,41577..41865,41956..42056,42134..42260,42337..42377,42466..42555,42639..42720,42976..>44207)	Acanthamoeba castellanii str. Neff	14923104
ACA1_126180	mRNA	ACA1_126180	NW_004457616.1	44672	49191	D	ACA1_126180	join(<44672..44787,44984..45009,45108..45216,45308..45410,45524..45641,45730..45759,45855..45972,46051..46167,46238..46402,46475..47512,47586..47685,47794..47910,48023..48089,48157..48239,48307..48523,48692..>49191)	Acanthamoeba castellanii str. Neff	14923105
ACA1_126290	mRNA	ACA1_126290	NW_004457616.1	50462	52775	D	ACA1_126290	join(<50462..50517,51107..51233,51345..>52775)	Acanthamoeba castellanii str. Neff	14923106
ACA1_126310	mRNA	ACA1_126310	NW_004457616.1	58299	63416	D	ACA1_126310	join(<58299..58774,58876..59227,59313..59425,59508..59591,59679..59867,59926..60114,60203..60299,60430..60690,60802..60930,61038..61079,61129..61222,61377..61530,61606..61695,61771..61873,62035..62136,62226..62376,62451..62681,62766..62904,63023..>63416)	Acanthamoeba castellanii str. Neff	14923108
ACA1_126320	mRNA	ACA1_126320	NW_004457616.1	63613	64463	R	ACA1_126320	complement(join(<63613..63791,63875..63940,64062..64195,64273..>64463))	Acanthamoeba castellanii str. Neff	14923109
ACA1_126330	mRNA	ACA1_126330	NW_004457616.1	64684	67624	R	ACA1_126330	complement(join(<64684..64975,65058..65169,65232..65317,65460..66363,66466..67363,67604..>67624))	Acanthamoeba castellanii str. Neff	14923110
ACA1_126440	mRNA	ACA1_126440	NW_004457616.1	68801	69744	R	ACA1_126440	complement(join(<68801..68936,69038..69104,69191..69554,69736..>69744))	Acanthamoeba castellanii str. Neff	14923111
ACA1_126450	mRNA	ACA1_126450	NW_004457616.1	70224	70561	D	ACA1_126450	join(<70224..70329,70365..>70561)	Acanthamoeba castellanii str. Neff	14923112
ACA1_126460	mRNA	ACA1_126460	NW_004457616.1	71362	73120	D	ACA1_126460	join(<71362..71504,71613..71743,71809..71879,71975..72077,72166..72281,72362..72453,72527..72672,72752..72921,73049..>73120)	Acanthamoeba castellanii str. Neff	14923113
ACA1_126570	mRNA	ACA1_126570	NW_004457616.1	73759	76104	D	ACA1_126570	join(<73759..74037,74076..74267,74392..74581,74686..74807,74893..74988,75078..75213,75318..75553,75786..75894,75974..>76104)	Acanthamoeba castellanii str. Neff	14923114
ACA1_126680	mRNA	ACA1_126680	NW_004457616.1	76480	77407	D	ACA1_126680	join(<76480..76537,76651..76811,76894..77073,77144..>77407)	Acanthamoeba castellanii str. Neff	14923115
ACA1_126690	mRNA	ACA1_126690	NW_004457616.1	77793	80443	R	ACA1_126690	complement(join(<77793..77867,78133..78228,78303..78542,78629..78743,78872..78915,79008..79090,79168..79332,79451..79514,79586..79643,79801..79880,80003..>80443))	Acanthamoeba castellanii str. Neff	14923116
ACA1_126700	mRNA	ACA1_126700	NW_004457616.1	80673	81403	D	ACA1_126700	join(<80673..80852,80950..81036,81302..>81403)	Acanthamoeba castellanii str. Neff	14923117
ACA1_126710	mRNA	ACA1_126710	NW_004457616.1	82581	83586	D	ACA1_126710	join(<82581..82772,82870..83010,83131..83262,83368..>83586)	Acanthamoeba castellanii str. Neff	14923118
ACA1_126720	mRNA	ACA1_126720	NW_004457616.1	83829	85370	R	ACA1_126720	complement(join(<83829..84166,84262..84432,84499..84627,84724..84844,84916..85076,85232..>85370))	Acanthamoeba castellanii str. Neff	14923119
ACA1_126730	mRNA	ACA1_126730	NW_004457616.1	85489	86661	D	ACA1_126730	<85489..>86661	Acanthamoeba castellanii str. Neff	14923120
ACA1_126740	mRNA	ACA1_126740	NW_004457616.1	86853	89272	R	ACA1_126740	complement(join(<86853..87007,87085..87386,87511..87760,87860..87970,88037..88147,88242..88344,88428..88537,88674..88949,89116..>89272))	Acanthamoeba castellanii str. Neff	14923121
ACA1_303010	mRNA	ACA1_303010	NW_004457614.1	7111	7706	D	ACA1_303010	join(<7111..7243,7440..7529,7588..>7706)	Acanthamoeba castellanii str. Neff	14923090
ACA1_303120	mRNA	ACA1_303120	NW_004457614.1	13978	14537	R	ACA1_303120	complement(join(<13978..14027,14129..14407,14504..>14537))	Acanthamoeba castellanii str. Neff	14923089
ACA1_321900	mRNA	ACA1_321900	NW_004457613.1	376	5216	R	ACA1_321900	complement(join(<376..743,826..973,1040..1658,1910..2418,2508..2575,2667..2733,2799..2906,3039..>5216))	Acanthamoeba castellanii str. Neff	14923084
ACA1_321910	mRNA	ACA1_321910	NW_004457613.1	6010	11561	R	ACA1_321910	complement(join(<6010..6245,6335..6451,6614..6716,6788..7121,7318..7648,7763..7880,7924..8098,8172..8251,8349..8494,8585..8774,8892..9125,9219..9369,9485..9602,9676..9808,9939..10059,10128..10324,10456..10612,10710..10857,10900..11302,11454..>11561))	Acanthamoeba castellanii str. Neff	14923086
ACA1_321920	mRNA	ACA1_321920	NW_004457613.1	12348	16060	D	ACA1_321920	join(<12348..12521,12643..12834,12937..13071,13342..13488,13552..13621,13707..13807,13887..14021,14044..14112,14148..14210,14295..14391,14624..14778,14845..14921,15099..15177,15251..15375,15456..15548,15620..15695,15784..15879,15959..>16060)	Acanthamoeba castellanii str. Neff	14923087
ACA1_321930	mRNA	ACA1_321930	NW_004457613.1	16841	18121	D	ACA1_321930	join(<16841..17195,17325..17621,17708..17839,17946..>18121)	Acanthamoeba castellanii str. Neff	14923088
ACA1_321940	mRNA	ACA1_321940	NW_004457613.1	18228	18806	R	ACA1_321940	complement(join(<18228..18358,18453..18526,18598..>18806))	Acanthamoeba castellanii str. Neff	14923085
ACA1_321950	mRNA	ACA1_321950	NW_004457613.1	19257	21023	D	ACA1_321950	join(<19257..19408,19640..19801,19888..20075,20137..20258,20348..20580,20669..>21023)	Acanthamoeba castellanii str. Neff	14923080
ACA1_321960	mRNA	ACA1_321960	NW_004457613.1	21133	23505	D	ACA1_321960	join(<21133..21457,21565..21634,21766..21855,21930..22064,22145..22320,22388..22497,22568..22760,22847..22961,23059..23255,23339..>23505)	Acanthamoeba castellanii str. Neff	14923081
ACA1_321970	mRNA	ACA1_321970	NW_004457613.1	23872	25918	D	ACA1_321970	join(<23872..24018,24105..24278,24367..24484,24567..24674,24737..24953,25015..25318,25427..>25918)	Acanthamoeba castellanii str. Neff	14923082
ACA1_321980	mRNA	ACA1_321980	NW_004457613.1	25946	28276	R	ACA1_321980	complement(join(<25946..25984,26051..26173,26251..27019,27104..27174,27244..27362,27420..27519,27623..27757,27816..27861,27970..28062,28188..>28276))	Acanthamoeba castellanii str. Neff	14923083
ACA1_157180	mRNA	ACA1_157180	NW_004457611.1	696	975	D	ACA1_157180	join(<696..772,843..>975)	Acanthamoeba castellanii str. Neff	14923079
ACA1_157190	mRNA	ACA1_157190	NW_004457611.1	1013	1798	R	ACA1_157190	complement(join(<1013..1149,1207..1287,1304..1588,1600..>1798))	Acanthamoeba castellanii str. Neff	14922917
ACA1_157200	mRNA	ACA1_157200	NW_004457611.1	2028	3719	R	ACA1_157200	complement(join(<2028..2122,2207..2286,2369..2458,2562..2649,2704..2822,2998..3130,3428..>3719))	Acanthamoeba castellanii str. Neff	14922918
ACA1_157210	mRNA	ACA1_157210	NW_004457611.1	4512	7274	D	ACA1_157210	join(<4512..4766,4947..5048,5240..5314,5469..5627,5753..5875,6000..6088,6189..6326,6436..6544,6678..6947,7059..>7274)	Acanthamoeba castellanii str. Neff	14922919
ACA1_157220	mRNA	ACA1_157220	NW_004457611.1	11129	14251	D	ACA1_157220	join(<11129..11347,11596..11626,11718..11786,11882..11980,12095..12166,12275..12450,12557..12648,12728..12783,12874..13004,13115..13259,13356..13427,13504..13691,13784..13920,14170..>14251)	Acanthamoeba castellanii str. Neff	14922920
ACA1_157230	mRNA	ACA1_157230	NW_004457611.1	15049	15480	D	ACA1_157230	join(<15049..15291,15307..>15480)	Acanthamoeba castellanii str. Neff	14922921
ACA1_157240	mRNA	ACA1_157240	NW_004457611.1	15525	17266	R	ACA1_157240	complement(join(<15525..15639,15715..15793,15863..15979,16043..16163,16266..16356,16442..16526,16735..16794,16881..16991,17098..>17266))	Acanthamoeba castellanii str. Neff	14922922
ACA1_157250	mRNA	ACA1_157250	NW_004457611.1	18033	22495	D	ACA1_157250	join(<18033..18169,18250..18439,18473..18990,19763..19861,19967..20051,20124..20182,20269..20331,20418..20494,20601..20711,20827..20883,21027..21127,21231..21366,21470..21643,21747..21841,21963..22027,22153..22253,22344..>22495)	Acanthamoeba castellanii str. Neff	14922923
ACA1_157260	mRNA	ACA1_157260	NW_004457611.1	23156	25414	D	ACA1_157260	join(<23156..23251,23378..23435,23506..23654,23812..23939,24006..24209,24277..24397,24479..24654,24722..24782,24900..24971,25044..25092,25179..>25414)	Acanthamoeba castellanii str. Neff	14922924
ACA1_157270	mRNA	ACA1_157270	NW_004457611.1	25973	28536	D	ACA1_157270	join(<25973..26723,26993..27135,27239..27361,27452..27647,27739..27894,28115..>28536)	Acanthamoeba castellanii str. Neff	14922925
ACA1_157280	mRNA	ACA1_157280	NW_004457611.1	28713	29904	D	ACA1_157280	join(<28713..28891,29004..29245,29328..29431,29512..29615,29739..>29904)	Acanthamoeba castellanii str. Neff	14922926
ACA1_157290	mRNA	ACA1_157290	NW_004457611.1	31567	33590	D	ACA1_157290	join(<31567..31671,31754..31993,32076..32162,32236..32353,32465..32506,32620..32729,32822..32908,33045..33195,33358..>33590)	Acanthamoeba castellanii str. Neff	14922927
ACA1_157300	mRNA	ACA1_157300	NW_004457611.1	33734	35460	D	ACA1_157300	join(<33734..33904,34022..34073,34169..34793,34804..35095,35179..35292,35377..>35460)	Acanthamoeba castellanii str. Neff	14922928
ACA1_157310	mRNA	ACA1_157310	NW_004457611.1	35858	40144	D	ACA1_157310	join(<35858..36294,36338..36432,36545..36813,36885..37013,37180..37260,37459..37550,37627..37790,37899..38023,38188..38262,38435..38674,38784..38888,38903..38981,39046..39272,39353..39515,39621..>40144)	Acanthamoeba castellanii str. Neff	14922929
ACA1_157320	mRNA	ACA1_157320	NW_004457611.1	40276	46530	R	ACA1_157320	complement(join(<40276..40365,40466..40645,40752..40912,41021..41219,41313..41482,41591..41738,41754..41868,41902..41938,42080..42166,42198..42498,42551..42631,42699..42869,42947..43236,43329..43416,43493..43647,43738..43931,44065..44636,44792..44968,45058..45212,45292..45487,45564..45648,45727..45787,45859..45915,45941..46380,46451..>46530))	Acanthamoeba castellanii str. Neff	14922930
ACA1_157330	mRNA	ACA1_157330	NW_004457611.1	47468	49233	D	ACA1_157330	join(<47468..47528,47837..48039,48218..48356,48485..48603,48747..48901,49122..>49233)	Acanthamoeba castellanii str. Neff	14922931
ACA1_157340	mRNA	ACA1_157340	NW_004457611.1	50366	52085	D	ACA1_157340	join(<50366..50593,50901..>52085)	Acanthamoeba castellanii str. Neff	14922932
ACA1_157350	mRNA	ACA1_157350	NW_004457611.1	53830	54938	D	ACA1_157350	join(<53830..53835,54030..>54938)	Acanthamoeba castellanii str. Neff	14922933
ACA1_157360	mRNA	ACA1_157360	NW_004457611.1	55615	61208	D	ACA1_157360	join(<55615..55826,55986..56092,56200..56295,56445..56629,56841..56915,60870..>61208)	Acanthamoeba castellanii str. Neff	14922934
ACA1_157470	mRNA	ACA1_157470	NW_004457611.1	61483	63419	D	ACA1_157470	join(<61483..61623,61697..61766,61848..61897,62008..62193,62467..62545,62712..62903,63035..63136,63259..>63419)	Acanthamoeba castellanii str. Neff	14922935
ACA1_157480	mRNA	ACA1_157480	NW_004457611.1	63539	64138	R	ACA1_157480	complement(<63539..>64138)	Acanthamoeba castellanii str. Neff	14922936
ACA1_157490	mRNA	ACA1_157490	NW_004457611.1	64389	65514	R	ACA1_157490	complement(join(<64389..64561,64656..64754,64838..64875,64955..65072,65174..65259,65339..>65514))	Acanthamoeba castellanii str. Neff	14922937
ACA1_157500	mRNA	ACA1_157500	NW_004457611.1	66550	68259	D	ACA1_157500	join(<66550..66724,66824..67257,67384..67538,67630..67696,67868..68049,68148..>68259)	Acanthamoeba castellanii str. Neff	14922938
ACA1_157510	mRNA	ACA1_157510	NW_004457611.1	68368	68877	R	ACA1_157510	complement(<68368..>68877)	Acanthamoeba castellanii str. Neff	14922939
ACA1_157520	mRNA	ACA1_157520	NW_004457611.1	69720	71964	D	ACA1_157520	join(<69720..70179,70374..70693,70842..70931,71006..71129,71243..71376,71575..71706,71758..71815,71945..>71964)	Acanthamoeba castellanii str. Neff	14922940
ACA1_157530	mRNA	ACA1_157530	NW_004457611.1	72313	76091	R	ACA1_157530	complement(join(<72313..72421,72500..74283,74618..74785,74998..75255,75353..75409,75583..75679,75982..>76091))	Acanthamoeba castellanii str. Neff	14922941
ACA1_157540	mRNA	ACA1_157540	NW_004457611.1	77090	81989	R	ACA1_157540	complement(join(<77090..77171,77376..77466,77558..77740,77952..78066,78170..78282,78389..78469,78547..78596,78699..78743,78820..78886,78962..79129,79278..79422,79515..79645,79830..79888,79972..80069,80169..80290,80379..80432,80555..80656,80780..80878,81123..81191,81280..81315,81407..81449,81545..81602,81850..>81989))	Acanthamoeba castellanii str. Neff	14922942
ACA1_157550	mRNA	ACA1_157550	NW_004457611.1	82239	83604	R	ACA1_157550	complement(join(<82239..82314,82462..82548,82642..82750,82872..82944,83023..83130,83219..83260,83335..83411,83535..>83604))	Acanthamoeba castellanii str. Neff	14922943
ACA1_157560	mRNA	ACA1_157560	NW_004457611.1	83744	86070	D	ACA1_157560	join(<83744..83855,83918..83976,84084..84152,84247..84342,84462..84540,84626..84712,84803..84946,85065..85139,85380..85897,86047..>86070)	Acanthamoeba castellanii str. Neff	14922944
ACA1_157570	mRNA	ACA1_157570	NW_004457611.1	89304	90069	D	ACA1_157570	join(<89304..89784,89945..>90069)	Acanthamoeba castellanii str. Neff	14922945
ACA1_157580	mRNA	ACA1_157580	NW_004457611.1	90412	91412	D	ACA1_157580	join(<90412..90616,90799..90916,90991..91183,91224..>91412)	Acanthamoeba castellanii str. Neff	14922946
ACA1_157590	mRNA	ACA1_157590	NW_004457611.1	91767	95863	D	ACA1_157590	join(<91767..91918,91995..92200,92286..92564,92654..92724,92810..93031,93114..93243,93360..93544,93636..93983,94080..94177,94308..94513,94619..94897,94964..95034,95109..95330,95421..95544,95622..>95863)	Acanthamoeba castellanii str. Neff	14922947
ACA1_157600	mRNA	ACA1_157600	NW_004457611.1	96452	97459	D	ACA1_157600	join(<96452..96499,96522..96646,96707..97129,97213..>97459)	Acanthamoeba castellanii str. Neff	14922948
ACA1_157710	mRNA	ACA1_157710	NW_004457611.1	101345	103355	R	ACA1_157710	complement(join(<101345..101380,101501..101866,102037..102112,102220..102386,102477..102610,102712..102956,103105..>103355))	Acanthamoeba castellanii str. Neff	14922949
ACA1_157720	mRNA	ACA1_157720	NW_004457611.1	103776	105707	R	ACA1_157720	complement(join(<103776..103890,103986..104104,104231..104415,104469..104597,104705..104762,104902..105002,105131..105405,105483..105529,105615..>105707))	Acanthamoeba castellanii str. Neff	14922950
ACA1_157730	mRNA	ACA1_157730	NW_004457611.1	105949	108126	D	ACA1_157730	join(<105949..106332,106443..106529,106645..106750,106839..106946,107036..107151,107233..107401,107511..107577,107657..107802,107902..108008,108109..>108126)	Acanthamoeba castellanii str. Neff	14922951
ACA1_157740	mRNA	ACA1_157740	NW_004457611.1	108487	109615	R	ACA1_157740	complement(join(<108487..108663,108790..108885,108975..109096,109186..109271,109428..109491,109579..>109615))	Acanthamoeba castellanii str. Neff	14922952
ACA1_157750	mRNA	ACA1_157750	NW_004457611.1	110128	111159	D	ACA1_157750	join(<110128..110310,110444..110522,110554..110717,110820..110977,111093..>111159)	Acanthamoeba castellanii str. Neff	14922953
ACA1_157760	mRNA	ACA1_157760	NW_004457611.1	111328	112730	D	ACA1_157760	join(<111328..111655,111777..111918,112031..112150,112265..112421,112536..>112730)	Acanthamoeba castellanii str. Neff	14922954
ACA1_157770	mRNA	ACA1_157770	NW_004457611.1	112904	114979	R	ACA1_157770	complement(join(<112904..113002,113145..113268,113377..113451,113579..113670,113817..113933,114060..114098,114203..114289,114416..114651,114789..114873,114941..>114979))	Acanthamoeba castellanii str. Neff	14922955
ACA1_157780	mRNA	ACA1_157780	NW_004457611.1	115147	116282	D	ACA1_157780	join(<115147..115203,115387..115592,115672..115784,115857..115965,116040..116154,116235..>116282)	Acanthamoeba castellanii str. Neff	14922956
ACA1_157790	mRNA	ACA1_157790	NW_004457611.1	116372	119655	R	ACA1_157790	complement(join(<116372..116467,116602..116730,116812..117527,117542..117560,117698..117983,118077..118130,118203..118231,118251..118293,118328..118590,118686..119405,119623..>119655))	Acanthamoeba castellanii str. Neff	14922957
ACA1_157800	mRNA	ACA1_157800	NW_004457611.1	119933	120802	R	ACA1_157800	complement(join(<119933..120196,120311..>120802))	Acanthamoeba castellanii str. Neff	14922958
ACA1_157810	mRNA	ACA1_157810	NW_004457611.1	121026	123062	R	ACA1_157810	complement(join(<121026..121211,121276..121445,121537..121708,121832..121916,122010..122079,122149..122242,122350..122425,122555..122628,122730..122801,122916..>123062))	Acanthamoeba castellanii str. Neff	14922959
ACA1_157820	mRNA	ACA1_157820	NW_004457611.1	123187	124471	D	ACA1_157820	join(<123187..123345,123438..123519,123626..123750,123880..123981,124115..124205,124323..>124471)	Acanthamoeba castellanii str. Neff	14922960
ACA1_157830	mRNA	ACA1_157830	NW_004457611.1	124601	125311	R	ACA1_157830	complement(join(<124601..125116,125156..>125311))	Acanthamoeba castellanii str. Neff	14922961
ACA1_157840	mRNA	ACA1_157840	NW_004457611.1	125744	128133	R	ACA1_157840	complement(join(<125744..125920,125980..126083,126155..126230,126321..126370,126426..126877,126956..>128133))	Acanthamoeba castellanii str. Neff	14922962
ACA1_157850	mRNA	ACA1_157850	NW_004457611.1	128390	129814	R	ACA1_157850	complement(join(<128390..128825,128928..129032,129129..129214,129301..129437,129513..129618,129695..>129814))	Acanthamoeba castellanii str. Neff	14922963
ACA1_157860	mRNA	ACA1_157860	NW_004457611.1	130038	133045	R	ACA1_157860	complement(join(<130038..130217,130344..130440,130522..130612,130740..130862,130967..131047,131127..131214,131531..131621,131705..131841,131938..132051,132158..132260,132348..132528,132673..>133045))	Acanthamoeba castellanii str. Neff	14922964
ACA1_157870	mRNA	ACA1_157870	NW_004457611.1	133444	139063	R	ACA1_157870	complement(join(<133444..133626,133740..133908,134031..134921,135027..135152,135163..135263,135274..135391,135521..135596,135693..135840,135910..136002,136130..136306,136413..136701,136795..136934,137140..137252,137330..137489,137574..137691,137770..138125,138235..138309,138490..138566,138629..138824,138899..>139063))	Acanthamoeba castellanii str. Neff	14922965
ACA1_157880	mRNA	ACA1_157880	NW_004457611.1	139555	141553	D	ACA1_157880	join(<139555..140029,140087..140205,140274..140827,140964..141039,141105..141389,141485..>141553)	Acanthamoeba castellanii str. Neff	14922966
ACA1_157890	mRNA	ACA1_157890	NW_004457611.1	141633	143029	R	ACA1_157890	complement(join(<141633..141920,142026..142347,142452..142483,142589..142784,142941..>143029))	Acanthamoeba castellanii str. Neff	14922967
ACA1_157900	mRNA	ACA1_157900	NW_004457611.1	143200	146276	D	ACA1_157900	join(<143200..143224,143326..143503,143611..143683,143785..143902,144074..144270,144347..144454,144571..144741,144838..145068,145137..145300,145382..145694,145778..145920,146024..>146276)	Acanthamoeba castellanii str. Neff	14922968
ACA1_157910	mRNA	ACA1_157910	NW_004457611.1	146363	150061	D	ACA1_157910	join(<146363..146461,146668..146868,146987..147084,147244..147414,147482..147676,147759..147806,147821..147937,148188..148259,148395..148502,148588..148668,148741..148872,149005..149480,149583..149799,149893..>150061)	Acanthamoeba castellanii str. Neff	14922969
ACA1_157920	mRNA	ACA1_157920	NW_004457611.1	150251	150721	D	ACA1_157920	<150251..>150721	Acanthamoeba castellanii str. Neff	14922970
ACA1_157930	mRNA	ACA1_157930	NW_004457611.1	151175	154591	R	ACA1_157930	complement(join(<151175..151287,151379..151553,151625..151740,151819..151909,152009..152105,152175..152298,152371..152587,152690..152815,152897..153105,153182..153386,153475..153690,153794..153923,154040..154194,154265..154449,154513..>154591))	Acanthamoeba castellanii str. Neff	14922971
ACA1_157940	mRNA	ACA1_157940	NW_004457611.1	154983	157245	R	ACA1_157940	complement(join(<154983..155317,155350..155453,155551..155695,155766..155820,155927..156124,156213..156370,156459..156547,156677..156785,156936..156990,157138..>157245))	Acanthamoeba castellanii str. Neff	14922972
ACA1_157950	mRNA	ACA1_157950	NW_004457611.1	157510	158480	D	ACA1_157950	join(<157510..157589,157607..157747,157760..158230,158354..>158480)	Acanthamoeba castellanii str. Neff	14922973
ACA1_157970	mRNA	ACA1_157970	NW_004457611.1	164066	166396	R	ACA1_157970	complement(<164066..>166396)	Acanthamoeba castellanii str. Neff	14922975
ACA1_157980	mRNA	ACA1_157980	NW_004457611.1	167275	171633	D	ACA1_157980	join(<167275..167390,167557..167683,167885..168150,168218..168483,168571..168682,168808..168890,169032..169162,169282..169405,169526..169828,169948..170058,170168..170256,170367..170470,170579..170708,170794..170889,171009..171106,171246..171300,171526..>171633)	Acanthamoeba castellanii str. Neff	14922976
ACA1_158000	mRNA	ACA1_158000	NW_004457611.1	175712	182191	R	ACA1_158000	complement(join(<175712..176012,176078..176170,176256..176444,176553..176635,176790..176937,177111..177327,177443..177746,177917..178056,178182..178619,178818..179273,179514..179548,179775..179820,179964..180037,180145..180187,180337..180382,180530..181559,181920..>182191))	Acanthamoeba castellanii str. Neff	14922978
ACA1_158010	mRNA	ACA1_158010	NW_004457611.1	182616	183933	D	ACA1_158010	join(<182616..182880,182960..183107,183289..183413,183446..>183933)	Acanthamoeba castellanii str. Neff	14922979
ACA1_158020	mRNA	ACA1_158020	NW_004457611.1	184127	185413	D	ACA1_158020	join(<184127..184164,184245..184365,184484..184619,184723..184779,184902..185006,185130..185181,185260..>185413)	Acanthamoeba castellanii str. Neff	14922980
ACA1_158030	mRNA	ACA1_158030	NW_004457611.1	185670	186492	R	ACA1_158030	complement(join(<185670..185707,185829..185921,186002..186062,186300..186383,186454..>186492))	Acanthamoeba castellanii str. Neff	14922981
ACA1_158040	mRNA	ACA1_158040	NW_004457611.1	191942	193622	D	ACA1_158040	join(<191942..192100,192247..193248,193337..193450,193518..>193622)	Acanthamoeba castellanii str. Neff	14922982
ACA1_158150	mRNA	ACA1_158150	NW_004457611.1	196185	197336	R	ACA1_158150	complement(join(<196185..196609,196635..>197336))	Acanthamoeba castellanii str. Neff	14922983
ACA1_158160	mRNA	ACA1_158160	NW_004457611.1	197406	198065	R	ACA1_158160	complement(<197406..>198065)	Acanthamoeba castellanii str. Neff	14922984
ACA1_158170	mRNA	ACA1_158170	NW_004457611.1	201077	203606	R	ACA1_158170	complement(join(<201077..201453,201539..201683,201793..201936,202069..202227,202380..202562,202765..203026,203147..203401,203506..>203606))	Acanthamoeba castellanii str. Neff	14922985
ACA1_158180	mRNA	ACA1_158180	NW_004457611.1	203802	207615	D	ACA1_158180	join(<203802..204034,204120..204425,204540..204624,204934..205093,205194..205364,205534..205602,205797..205939,206125..206258,206371..206434,206543..206681,206837..206904,207097..207267,207313..>207615)	Acanthamoeba castellanii str. Neff	14922986
ACA1_158190	mRNA	ACA1_158190	NW_004457611.1	207890	208827	R	ACA1_158190	complement(join(<207890..208342,208377..208473,208527..208642,208699..208752,208819..>208827))	Acanthamoeba castellanii str. Neff	14922987
ACA1_158200	mRNA	ACA1_158200	NW_004457611.1	208951	209486	R	ACA1_158200	complement(join(<208951..209079,209144..209283,209354..>209486))	Acanthamoeba castellanii str. Neff	14922988
ACA1_158210	mRNA	ACA1_158210	NW_004457611.1	209933	210812	D	ACA1_158210	join(<209933..210148,210370..210456,210584..210666,210782..>210812)	Acanthamoeba castellanii str. Neff	14922989
ACA1_158320	mRNA	ACA1_158320	NW_004457611.1	211261	214726	R	ACA1_158320	complement(join(<211261..211277,211731..211843,212102..212190,212462..212562,212715..212786,213192..213244,213453..213547,213633..213717,214153..214274,214373..>214726))	Acanthamoeba castellanii str. Neff	14922990
ACA1_158430	mRNA	ACA1_158430	NW_004457611.1	215262	218383	D	ACA1_158430	join(<215262..215603,215728..215877,215903..216856,216981..218085,218262..>218383)	Acanthamoeba castellanii str. Neff	14922991
ACA1_158440	mRNA	ACA1_158440	NW_004457611.1	218590	219906	D	ACA1_158440	join(<218590..218756,218881..218990,219269..219391,219487..219616,219783..>219906)	Acanthamoeba castellanii str. Neff	14922992
ACA1_158450	mRNA	ACA1_158450	NW_004457611.1	220228	221150	R	ACA1_158450	complement(join(<220228..220288,220415..220494,220594..220703,220829..220961,221109..>221150))	Acanthamoeba castellanii str. Neff	14922993
ACA1_158460	mRNA	ACA1_158460	NW_004457611.1	221563	226553	R	ACA1_158460	complement(join(<221563..221652,221755..222089,222225..222381,222462..222641,222798..222982,223164..223668,223753..223896,224044..224653,224832..225685,225847..225958,226067..226457,226526..>226553))	Acanthamoeba castellanii str. Neff	14922994
ACA1_158480	mRNA	ACA1_158480	NW_004457611.1	230185	234504	D	ACA1_158480	join(<230185..230375,230468..230499,230573..230670,230727..230834,230931..231016,231117..231262,231598..231674,231860..231983,232079..232182,232262..232553,232672..232756,232859..232992,233123..233220,233319..233433,233744..233812,233901..233990,234109..234197,234309..>234504)	Acanthamoeba castellanii str. Neff	14922996
ACA1_158490	mRNA	ACA1_158490	NW_004457611.1	234641	237633	D	ACA1_158490	join(<234641..234907,235030..235102,235192..235265,235394..235628,235713..235847,236011..236045,236072..236290,236321..236434,236547..236630,236710..>237633)	Acanthamoeba castellanii str. Neff	14922997
ACA1_158500	mRNA	ACA1_158500	NW_004457611.1	237969	240052	D	ACA1_158500	join(<237969..238018,238159..238310,238467..238699,238816..238899,239050..239124,239231..239288,239429..239620,239730..>240052)	Acanthamoeba castellanii str. Neff	14922998
ACA1_158510	mRNA	ACA1_158510	NW_004457611.1	240526	242378	R	ACA1_158510	complement(join(<240526..240814,240894..241066,241177..241263,241404..241445,241658..241808,242032..242172,242248..>242378))	Acanthamoeba castellanii str. Neff	14922999
ACA1_158520	mRNA	ACA1_158520	NW_004457611.1	242418	243034	R	ACA1_158520	complement(join(<242418..242645,242746..242797,242868..242938,243008..>243034))	Acanthamoeba castellanii str. Neff	14923000
ACA1_158530	mRNA	ACA1_158530	NW_004457611.1	243331	245988	D	ACA1_158530	join(<243331..243606,243671..243842,243957..244057,244171..244273,244377..244462,244498..244646,244741..244929,245016..245074,245264..245296,245370..245492,245611..245652,245736..245827,245914..>245988)	Acanthamoeba castellanii str. Neff	14923001
ACA1_158540	mRNA	ACA1_158540	NW_004457611.1	246773	248167	D	ACA1_158540	join(<246773..246808,246859..247799,247915..>248167)	Acanthamoeba castellanii str. Neff	14923002
ACA1_158550	mRNA	ACA1_158550	NW_004457611.1	248338	249905	D	ACA1_158550	join(<248338..248517,248651..248744,248853..248957,249037..249111,249214..249317,249445..249568,249654..249787,249840..>249905)	Acanthamoeba castellanii str. Neff	14923003
ACA1_158560	mRNA	ACA1_158560	NW_004457611.1	250006	250497	R	ACA1_158560	complement(join(<250006..250167,250280..250356,250422..>250497))	Acanthamoeba castellanii str. Neff	14923004
ACA1_158670	mRNA	ACA1_158670	NW_004457611.1	250594	251531	D	ACA1_158670	join(<250594..250789,250857..250909,250997..251088,251185..251336,251503..>251531)	Acanthamoeba castellanii str. Neff	14923005
ACA1_158780	mRNA	ACA1_158780	NW_004457611.1	251900	256158	R	ACA1_158780	complement(join(<251900..252077,252161..252211,252325..252452,252559..252642,252781..252921,253017..253164,253259..253320,253439..253664,253804..253912,254005..254093,254210..254325,254422..254613,254703..254936,255078..255182,255298..255341,255415..255590,255718..255935,256117..>256158))	Acanthamoeba castellanii str. Neff	14923006
ACA1_158790	mRNA	ACA1_158790	NW_004457611.1	256385	257654	D	ACA1_158790	join(<256385..256532,256680..256736,256836..256915,257022..257141,257209..257299,257399..257502,257601..>257654)	Acanthamoeba castellanii str. Neff	14923007
ACA1_158800	mRNA	ACA1_158800	NW_004457611.1	258031	258486	D	ACA1_158800	join(<258031..258271,258338..>258486)	Acanthamoeba castellanii str. Neff	14923008
ACA1_158810	mRNA	ACA1_158810	NW_004457611.1	258663	259977	R	ACA1_158810	complement(join(<258663..258771,258860..258948,259034..259201,259347..259482,259568..>259977))	Acanthamoeba castellanii str. Neff	14923009
ACA1_158820	mRNA	ACA1_158820	NW_004457611.1	260234	263323	D	ACA1_158820	join(<260234..260365,260438..260529,260655..260829,260900..261008,261102..261148,261256..261362,261441..261639,261742..262116,262220..262437,262554..262643,262767..262928,263044..>263323)	Acanthamoeba castellanii str. Neff	14923010
ACA1_158830	mRNA	ACA1_158830	NW_004457611.1	263468	274878	D	ACA1_158830	join(<263468..263546,263636..263766,263887..264040,264144..264234,264346..264543,264627..264852,264944..265235,265312..265602,265703..265884,265989..266080,266188..266550,266630..266732,266854..267118,267192..267315,267465..267618,267750..267902,268001..268114,268231..268353,268459..268553,268644..268902,268996..269100,269200..269322,269457..269672,269773..270006,270083..270160,270233..270587,270712..270857,270935..271065,271185..271240,271330..271445,271542..271652,271734..271854,271970..272105,272184..272252,272352..272487,272595..272741,272850..273000,273068..273135,273229..273414,273516..273767,273856..274038,274171..274271,274386..>274878)	Acanthamoeba castellanii str. Neff	14923011
ACA1_158840	mRNA	ACA1_158840	NW_004457611.1	274984	276831	R	ACA1_158840	complement(join(<274984..275551,275605..275704,275768..276015,276079..276234,276350..>276831))	Acanthamoeba castellanii str. Neff	14923012
ACA1_158860	mRNA	ACA1_158860	NW_004457611.1	283458	287813	D	ACA1_158860	join(<283458..283713,284033..284140,284264..284392,284573..284790,284901..285244,285369..285449,285564..285783,285910..286051,286129..286217,286301..286377,286468..286623,286726..286847,286926..287017,287096..287400,287450..287528,287565..>287813)	Acanthamoeba castellanii str. Neff	14923014
ACA1_158870	mRNA	ACA1_158870	NW_004457611.1	288002	292617	D	ACA1_158870	join(<288002..288091,288368..288656,289001..289123,289245..289392,289581..289759,289938..290163,290340..290479,290615..290730,290817..290906,291023..291424,291514..291651,291746..291916,292036..292152,292217..292331,292451..>292617)	Acanthamoeba castellanii str. Neff	14923015
ACA1_158880	mRNA	ACA1_158880	NW_004457611.1	292711	292985	D	ACA1_158880	join(<292711..292792,292819..>292985)	Acanthamoeba castellanii str. Neff	14923016
ACA1_158890	mRNA	ACA1_158890	NW_004457611.1	293149	293805	R	ACA1_158890	complement(join(<293149..293302,293413..293568,293678..>293805))	Acanthamoeba castellanii str. Neff	14923017
ACA1_158900	mRNA	ACA1_158900	NW_004457611.1	294748	295160	D	ACA1_158900	join(<294748..294888,295056..>295160)	Acanthamoeba castellanii str. Neff	14923018
ACA1_158910	mRNA	ACA1_158910	NW_004457611.1	295346	296907	R	ACA1_158910	complement(join(<295346..295381,295477..295626,295713..295819,295958..296040,296194..296497,296583..>296907))	Acanthamoeba castellanii str. Neff	14923019
ACA1_158920	mRNA	ACA1_158920	NW_004457611.1	297624	298621	D	ACA1_158920	join(<297624..297764,297873..298331,298415..>298621)	Acanthamoeba castellanii str. Neff	14923020
ACA1_158930	mRNA	ACA1_158930	NW_004457611.1	298931	299592	D	ACA1_158930	join(<298931..299052,299124..299211,299316..299488,299577..>299592)	Acanthamoeba castellanii str. Neff	14923021
ACA1_158940	mRNA	ACA1_158940	NW_004457611.1	299884	302398	D	ACA1_158940	join(<299884..300500,300584..300646,300717..300917,301001..301302,301385..301524,301618..301716,301855..301950,302052..302228,302324..>302398)	Acanthamoeba castellanii str. Neff	14923022
ACA1_158950	mRNA	ACA1_158950	NW_004457611.1	302511	305074	D	ACA1_158950	join(<302511..302753,302845..302922,303005..303280,303409..303624,303753..303946,304050..304181,304283..304404,304491..304561,304676..>305074)	Acanthamoeba castellanii str. Neff	14923023
ACA1_158960	mRNA	ACA1_158960	NW_004457611.1	305252	305557	R	ACA1_158960	complement(<305252..>305557)	Acanthamoeba castellanii str. Neff	14923024
ACA1_158970	mRNA	ACA1_158970	NW_004457611.1	305811	306293	R	ACA1_158970	complement(<305811..>306293)	Acanthamoeba castellanii str. Neff	14923025
ACA1_158980	mRNA	ACA1_158980	NW_004457611.1	306459	307985	R	ACA1_158980	complement(join(<306459..306495,306603..306739,307047..>307985))	Acanthamoeba castellanii str. Neff	14923026
ACA1_158990	mRNA	ACA1_158990	NW_004457611.1	309400	310821	R	ACA1_158990	complement(join(<309400..309434,309562..310031,310049..>310821))	Acanthamoeba castellanii str. Neff	14923027
ACA1_159000	mRNA	ACA1_159000	NW_004457611.1	314864	316752	R	ACA1_159000	complement(join(<314864..314950,315113..315218,315349..315362,315485..315649,315687..315957,316105..316238,316516..>316752))	Acanthamoeba castellanii str. Neff	14923028
ACA1_159010	mRNA	ACA1_159010	NW_004457611.1	317097	318593	D	ACA1_159010	join(<317097..317131,317247..317427,317524..317637,317723..317831,317905..318065,318144..318225,318304..318424,318449..>318593)	Acanthamoeba castellanii str. Neff	14923029
ACA1_159020	mRNA	ACA1_159020	NW_004457611.1	318679	319556	R	ACA1_159020	complement(join(<318679..318719,318807..318872,319015..319063,319161..319273,319353..319436,319499..>319556))	Acanthamoeba castellanii str. Neff	14923030
ACA1_159030	mRNA	ACA1_159030	NW_004457611.1	320145	324126	D	ACA1_159030	join(<320145..320656,320741..320870,320947..321000,321102..321707,321800..321911,322037..322130,322224..322353,322464..322626,322745..322801,322937..323070,323366..323522,323647..323797,323895..>324126)	Acanthamoeba castellanii str. Neff	14923031
ACA1_159040	mRNA	ACA1_159040	NW_004457611.1	324241	325029	R	ACA1_159040	complement(join(<324241..324341,324438..>325029))	Acanthamoeba castellanii str. Neff	14923032
ACA1_159050	mRNA	ACA1_159050	NW_004457611.1	325904	327894	D	ACA1_159050	join(<325904..326155,326297..326380,326492..326556,326695..326823,326892..326941,327120..327185,327254..327300,327462..327623,327742..>327894)	Acanthamoeba castellanii str. Neff	14923033
ACA1_159060	mRNA	ACA1_159060	NW_004457611.1	328656	332449	D	ACA1_159060	join(<328656..328988,329106..329296,329390..329623,329719..329791,329870..330046,330163..330363,330466..330779,330794..330902,330993..331094,331201..331267,331407..331536,331665..331774,331897..331972,332053..332118,332215..>332449)	Acanthamoeba castellanii str. Neff	14923034
ACA1_159070	mRNA	ACA1_159070	NW_004457611.1	332818	334617	D	ACA1_159070	join(<332818..332974,333076..333218,333322..333404,333487..333599,333688..333808,333907..334099,334165..334321,334418..>334617)	Acanthamoeba castellanii str. Neff	14923035
ACA1_159080	mRNA	ACA1_159080	NW_004457611.1	334714	337137	D	ACA1_159080	join(<334714..334996,335101..335173,335275..335545,335618..335859,335952..336025,336116..336210,336310..336625,336714..336892,336997..>337137)	Acanthamoeba castellanii str. Neff	14923036
ACA1_159090	mRNA	ACA1_159090	NW_004457611.1	337258	338347	R	ACA1_159090	complement(join(<337258..338093,338164..>338347))	Acanthamoeba castellanii str. Neff	14923037
ACA1_159110	mRNA	ACA1_159110	NW_004457611.1	339424	339812	R	ACA1_159110	complement(join(<339424..339486,339569..339665,339703..>339812))	Acanthamoeba castellanii str. Neff	14923039
ACA1_159120	mRNA	ACA1_159120	NW_004457611.1	340118	341419	D	ACA1_159120	join(<340118..340193,340298..340630,340743..>341419)	Acanthamoeba castellanii str. Neff	14923040
ACA1_159130	mRNA	ACA1_159130	NW_004457611.1	341615	342856	R	ACA1_159130	complement(join(<341615..341755,341810..342109,342225..342353,342509..342681,342787..>342856))	Acanthamoeba castellanii str. Neff	14923041
ACA1_159140	mRNA	ACA1_159140	NW_004457611.1	343182	344050	R	ACA1_159140	complement(join(<343182..343592,343661..343711,343798..343859,343918..>344050))	Acanthamoeba castellanii str. Neff	14923042
ACA1_159160	mRNA	ACA1_159160	NW_004457611.1	348479	349354	R	ACA1_159160	complement(join(<348479..348991,349096..349201,349287..>349354))	Acanthamoeba castellanii str. Neff	14923046
ACA1_159170	mRNA	ACA1_159170	NW_004457611.1	349554	351191	R	ACA1_159170	complement(join(<349554..349696,349805..349952,350064..350171,350317..350398,350592..350736,350867..>351191))	Acanthamoeba castellanii str. Neff	14923044
ACA1_159180	mRNA	ACA1_159180	NW_004457611.1	354579	356129	D	ACA1_159180	join(<354579..354638,354732..354752,354872..354976,355013..355118,355179..355209,355599..355784,355808..356014,356063..>356129)	Acanthamoeba castellanii str. Neff	14923045
ACA1_159190	mRNA	ACA1_159190	NW_004457611.1	357444	359425	R	ACA1_159190	complement(join(<357444..357570,357633..357771,357857..357926,357999..358081,358155..358261,358416..358634,358768..358951,358987..359086,359243..359338,359369..>359425))	Acanthamoeba castellanii str. Neff	14923047
ACA1_159200	mRNA	ACA1_159200	NW_004457611.1	359589	363060	D	ACA1_159200	join(<359589..359627,360041..360478,360592..360778,360902..361017,361088..361146,361286..361415,361514..361633,361716..361842,361936..362064,362127..362251,362429..362512,362602..362679,362789..362829,362925..>363060)	Acanthamoeba castellanii str. Neff	14923048
ACA1_159210	mRNA	ACA1_159210	NW_004457611.1	363106	365075	D	ACA1_159210	join(<363106..363156,363244..363501,363553..363662,363724..363867,364011..364032,364103..364179,364258..364372,364414..364491,364565..364680,364760..364833,364927..>365075)	Acanthamoeba castellanii str. Neff	14923049
ACA1_159220	mRNA	ACA1_159220	NW_004457611.1	365704	367087	D	ACA1_159220	join(<365704..365715,365935..366118,366166..366251,366323..366402,366504..366669,366873..366942,367035..>367087)	Acanthamoeba castellanii str. Neff	14923050
ACA1_159430	mRNA	ACA1_159430	NW_004457611.1	367226	367625	R	ACA1_159430	complement(join(<367226..367310,367391..367518,367578..>367625))	Acanthamoeba castellanii str. Neff	14923051
ACA1_159440	mRNA	ACA1_159440	NW_004457611.1	367969	368618	D	ACA1_159440	join(<367969..368088,368226..368311,368437..>368618)	Acanthamoeba castellanii str. Neff	14923052
ACA1_159550	mRNA	ACA1_159550	NW_004457611.1	369016	370399	R	ACA1_159550	complement(join(<369016..369204,369280..369380,369539..369683,369807..369919,370027..370147,370250..>370399))	Acanthamoeba castellanii str. Neff	14923053
ACA1_159660	mRNA	ACA1_159660	NW_004457611.1	370594	371517	D	ACA1_159660	join(<370594..370633,370764..370861,370961..371129,371204..371279,371394..>371517)	Acanthamoeba castellanii str. Neff	14923054
ACA1_159670	mRNA	ACA1_159670	NW_004457611.1	371653	372466	R	ACA1_159670	complement(join(<371653..371703,371795..>372466))	Acanthamoeba castellanii str. Neff	14923055
ACA1_159780	mRNA	ACA1_159780	NW_004457611.1	374175	375056	R	ACA1_159780	complement(join(<374175..374323,374536..374883,375026..>375056))	Acanthamoeba castellanii str. Neff	14923056
ACA1_159790	mRNA	ACA1_159790	NW_004457611.1	375941	376651	D	ACA1_159790	join(<375941..376128,376234..376316,376401..>376651)	Acanthamoeba castellanii str. Neff	14923057
ACA1_159800	mRNA	ACA1_159800	NW_004457611.1	379360	382212	D	ACA1_159800	join(<379360..379801,380141..380257,380363..380455,380568..380669,380789..380943,381017..381190,381281..381439,381544..381823,381905..>382212)	Acanthamoeba castellanii str. Neff	14923058
ACA1_159810	mRNA	ACA1_159810	NW_004457611.1	384132	385460	R	ACA1_159810	complement(<384132..>385460)	Acanthamoeba castellanii str. Neff	14923059
ACA1_159820	mRNA	ACA1_159820	NW_004457611.1	386052	387803	R	ACA1_159820	complement(join(<386052..387670,387794..>387803))	Acanthamoeba castellanii str. Neff	14923060
ACA1_159830	mRNA	ACA1_159830	NW_004457611.1	388559	390122	R	ACA1_159830	complement(join(<388559..388654,388752..388959,389078..389158,389257..389322,389560..389689,389793..389869,389980..>390122))	Acanthamoeba castellanii str. Neff	14923061
ACA1_159840	mRNA	ACA1_159840	NW_004457611.1	390333	392334	R	ACA1_159840	complement(join(<390333..390444,390541..391787,391875..392031,392150..>392334))	Acanthamoeba castellanii str. Neff	14923062
ACA1_159850	mRNA	ACA1_159850	NW_004457611.1	392693	393853	D	ACA1_159850	join(<392693..392776,392908..392980,393050..393148,393227..393288,393381..393449,393537..393644,393713..>393853)	Acanthamoeba castellanii str. Neff	14923063
ACA1_159960	mRNA	ACA1_159960	NW_004457611.1	394201	395226	D	ACA1_159960	join(<394201..394594,394704..394841,394922..394982,395076..>395226)	Acanthamoeba castellanii str. Neff	14923064
ACA1_159970	mRNA	ACA1_159970	NW_004457611.1	395592	397780	D	ACA1_159970	join(<395592..396137,396276..396434,396551..396815,396889..397089,397218..>397780)	Acanthamoeba castellanii str. Neff	14923065
ACA1_159980	mRNA	ACA1_159980	NW_004457611.1	398166	401486	R	ACA1_159980	complement(join(<398166..398360,398420..398476,398786..398992,399105..399186,399497..399552,399718..399745,399840..399930,400017..400103,400252..400333,400461..400530,400634..400732,400829..400896,401050..401142,401248..401308,401371..>401486))	Acanthamoeba castellanii str. Neff	14923066
ACA1_159990	mRNA	ACA1_159990	NW_004457611.1	402669	404339	D	ACA1_159990	join(<402669..402838,402938..402987,403083..403164,403297..403386,403511..403592,403683..403931,404005..404061,404205..>404339)	Acanthamoeba castellanii str. Neff	14923067
ACA1_160000	mRNA	ACA1_160000	NW_004457611.1	404394	405755	R	ACA1_160000	complement(join(<404394..404458,404793..404874,404950..405394,405430..405524,405627..>405755))	Acanthamoeba castellanii str. Neff	14923068
ACA1_160010	mRNA	ACA1_160010	NW_004457611.1	407485	407817	D	ACA1_160010	<407485..>407817	Acanthamoeba castellanii str. Neff	14923069
ACA1_160020	mRNA	ACA1_160020	NW_004457611.1	408119	409461	R	ACA1_160020	complement(join(<408119..408183,408509..408590,408666..409110,409146..409240,409333..>409461))	Acanthamoeba castellanii str. Neff	14923070
ACA1_160030	mRNA	ACA1_160030	NW_004457611.1	410624	410856	D	ACA1_160030	join(<410624..410663,410717..>410856)	Acanthamoeba castellanii str. Neff	14923071
ACA1_160040	mRNA	ACA1_160040	NW_004457611.1	410902	413754	R	ACA1_160040	complement(join(<410902..411090,411193..411293,411419..411563,411690..411802,411907..412027,412131..412282,412365..412434,412498..412615,412729..412833,412909..413060,413140..413275,413359..413447,413529..413581,413658..>413754))	Acanthamoeba castellanii str. Neff	14923072
ACA1_160150	mRNA	ACA1_160150	NW_004457611.1	419508	420219	R	ACA1_160150	complement(join(<419508..419528,419679..419997,420050..>420219))	Acanthamoeba castellanii str. Neff	14923073
ACA1_160160	mRNA	ACA1_160160	NW_004457611.1	422217	423494	R	ACA1_160160	complement(<422217..>423494)	Acanthamoeba castellanii str. Neff	14923074
ACA1_160170	mRNA	ACA1_160170	NW_004457611.1	424064	426251	R	ACA1_160170	complement(join(<424064..424269,424354..424500,424618..424687,424813..425097,425171..425281,425370..425446,425535..425828,425918..426028,426125..>426251))	Acanthamoeba castellanii str. Neff	14923075
ACA1_160280	mRNA	ACA1_160280	NW_004457611.1	429381	429871	R	ACA1_160280	complement(join(<429381..429411,429498..429641,429777..>429871))	Acanthamoeba castellanii str. Neff	14923076
ACA1_160390	mRNA	ACA1_160390	NW_004457611.1	431161	432052	D	ACA1_160390	join(<431161..431188,431302..431388,431472..431542,431663..431803,431918..>432052)	Acanthamoeba castellanii str. Neff	14923077
ACA1_160400	mRNA	ACA1_160400	NW_004457611.1	432161	432397	R	ACA1_160400	complement(join(<432161..432328,432341..>432397))	Acanthamoeba castellanii str. Neff	14923078
ACA1_325410	mRNA	ACA1_325410	NW_004457610.1	11	1285	D	ACA1_325410	join(<11..175,380..472,519..690,706..870,963..>1285)	Acanthamoeba castellanii str. Neff	14922916
ACA1_325420	mRNA	ACA1_325420	NW_004457610.1	3618	4943	D	ACA1_325420	join(<3618..3899,3989..4136,4253..4408,4532..4680,4830..>4943)	Acanthamoeba castellanii str. Neff	14922890
ACA1_325430	mRNA	ACA1_325430	NW_004457610.1	4983	6092	R	ACA1_325430	complement(join(<4983..5249,5334..>6092))	Acanthamoeba castellanii str. Neff	14922891
ACA1_325440	mRNA	ACA1_325440	NW_004457610.1	6451	9316	D	ACA1_325440	join(<6451..6496,6564..6669,6733..6824,6931..7033,7108..7295,7399..7541,7624..7770,7856..7936,8011..8032,8102..8166,8261..8415,8458..8529,8712..8892,8962..9064,9162..>9316)	Acanthamoeba castellanii str. Neff	14922892
ACA1_325450	mRNA	ACA1_325450	NW_004457610.1	9619	10649	D	ACA1_325450	join(<9619..9939,10011..>10649)	Acanthamoeba castellanii str. Neff	14922893
ACA1_325460	mRNA	ACA1_325460	NW_004457610.1	10770	13617	R	ACA1_325460	complement(join(<10770..10897,10981..11147,11271..11376,11457..11538,11619..11803,11880..12021,12143..12228,12312..12411,12557..12625,12718..12769,12854..13537,13613..>13617))	Acanthamoeba castellanii str. Neff	14922894
ACA1_325470	mRNA	ACA1_325470	NW_004457610.1	14447	15434	R	ACA1_325470	complement(join(<14447..15007,15186..>15434))	Acanthamoeba castellanii str. Neff	14922895
ACA1_325480	mRNA	ACA1_325480	NW_004457610.1	17433	18619	D	ACA1_325480	join(<17433..17550,17669..17775,17867..>18619)	Acanthamoeba castellanii str. Neff	14922896
ACA1_325490	mRNA	ACA1_325490	NW_004457610.1	18877	21279	D	ACA1_325490	join(<18877..19004,19139..19380,19500..20124,20194..20296,20375..20460,20538..20652,20731..20825,21099..>21279)	Acanthamoeba castellanii str. Neff	14922897
ACA1_325500	mRNA	ACA1_325500	NW_004457610.1	21409	22149	D	ACA1_325500	join(<21409..21457,21543..21736,21873..22000,22080..>22149)	Acanthamoeba castellanii str. Neff	14922898
ACA1_325510	mRNA	ACA1_325510	NW_004457610.1	22363	23154	D	ACA1_325510	join(<22363..22957,23072..>23154)	Acanthamoeba castellanii str. Neff	14922899
ACA1_325520	mRNA	ACA1_325520	NW_004457610.1	23762	24443	R	ACA1_325520	complement(join(<23762..23866,23981..24153,24290..>24443))	Acanthamoeba castellanii str. Neff	14922900
ACA1_325530	mRNA	ACA1_325530	NW_004457610.1	24748	26890	R	ACA1_325530	complement(join(<24748..24867,24930..25075,25154..25370,25443..25562,25649..25713,25818..25948,26045..26177,26232..26442,26690..>26890))	Acanthamoeba castellanii str. Neff	14922901
ACA1_325540	mRNA	ACA1_325540	NW_004457610.1	28135	30660	D	ACA1_325540	join(<28135..28477,28573..28737,28838..28943,29031..29188,29273..29395,29506..29573,29657..29722,29816..30480,30552..>30660)	Acanthamoeba castellanii str. Neff	14922902
ACA1_325550	mRNA	ACA1_325550	NW_004457610.1	31386	32440	D	ACA1_325550	join(<31386..31481,31582..31665,31754..31891,32012..32211,32284..>32440)	Acanthamoeba castellanii str. Neff	14922903
ACA1_325560	mRNA	ACA1_325560	NW_004457610.1	32900	34593	D	ACA1_325560	join(<32900..32979,33124..33233,33307..33584,33718..33835,33945..34064,34182..34337,34445..>34593)	Acanthamoeba castellanii str. Neff	14922904
ACA1_325570	mRNA	ACA1_325570	NW_004457610.1	34963	35715	D	ACA1_325570	<34963..>35715	Acanthamoeba castellanii str. Neff	14922905
ACA1_325580	mRNA	ACA1_325580	NW_004457610.1	35870	38496	R	ACA1_325580	complement(join(<35870..35998,36102..36157,36233..36419,36501..36640,36755..36894,37033..37112,37269..37329,37427..37532,37615..37719,37837..37915,38016..38103,38204..>38496))	Acanthamoeba castellanii str. Neff	14922906
ACA1_325590	mRNA	ACA1_325590	NW_004457610.1	39133	40613	R	ACA1_325590	complement(join(<39133..39458,39721..39870,39950..40192,40349..>40613))	Acanthamoeba castellanii str. Neff	14922907
ACA1_325600	mRNA	ACA1_325600	NW_004457610.1	41269	45916	R	ACA1_325600	complement(join(<41269..41367,41475..41655,41722..41784,41864..41970,42068..42202,42304..42449,42539..42687,42770..42852,42960..43183,43288..43830,43968..44244,44323..44401,44477..44846,44934..45103,45184..45299,45449..45683,45771..>45916))	Acanthamoeba castellanii str. Neff	14922908
ACA1_325610	mRNA	ACA1_325610	NW_004457610.1	49405	54112	R	ACA1_325610	complement(join(<49405..49458,49644..49830,49908..50077,50182..50432,50510..50556,50644..50712,50793..50866,50974..52119,52238..52316,52396..52640,52734..53058,53115..53468,53562..53732,53832..>54112))	Acanthamoeba castellanii str. Neff	14922909
ACA1_325720	mRNA	ACA1_325720	NW_004457610.1	57744	59887	D	ACA1_325720	join(<57744..57867,58085..58252,58513..58655,58796..59492,59589..>59887)	Acanthamoeba castellanii str. Neff	14922910
ACA1_325730	mRNA	ACA1_325730	NW_004457610.1	60730	63119	D	ACA1_325730	join(<60730..60793,60885..61034,61131..61283,61384..61536,61647..61802,61882..>63119)	Acanthamoeba castellanii str. Neff	14922911
ACA1_325740	mRNA	ACA1_325740	NW_004457610.1	63259	64008	R	ACA1_325740	complement(join(<63259..63596,63696..63809,63960..>64008))	Acanthamoeba castellanii str. Neff	14922912
ACA1_325750	mRNA	ACA1_325750	NW_004457610.1	64249	65021	R	ACA1_325750	complement(join(<64249..64554,64692..64798,64973..>65021))	Acanthamoeba castellanii str. Neff	14922913
ACA1_325760	mRNA	ACA1_325760	NW_004457610.1	66175	66853	R	ACA1_325760	complement(join(<66175..66515,66583..66693,66805..>66853))	Acanthamoeba castellanii str. Neff	14922914
ACA1_325770	mRNA	ACA1_325770	NW_004457610.1	67231	67560	R	ACA1_325770	complement(<67231..>67560)	Acanthamoeba castellanii str. Neff	14922915
ACA1_022560	mRNA	ACA1_022560	NW_004457608.1	83	908	R	ACA1_022560	complement(join(<83..272,493..660,729..>908))	Acanthamoeba castellanii str. Neff	14922889
ACA1_022670	mRNA	ACA1_022670	NW_004457608.1	7576	9275	R	ACA1_022670	complement(join(<7576..7594,7859..7916,7954..8038,8096..8172,8372..8967,9121..>9275))	Acanthamoeba castellanii str. Neff	14922882
ACA1_022680	mRNA	ACA1_022680	NW_004457608.1	11843	12733	D	ACA1_022680	join(<11843..11882,11949..12142,12212..>12733)	Acanthamoeba castellanii str. Neff	14922880
ACA1_022700	mRNA	ACA1_022700	NW_004457608.1	16562	24940	R	ACA1_022700	complement(join(<16562..16807,16894..17010,17250..17300,17433..17507,17584..17836,17978..18374,18539..18869,19136..19378,19475..19709,19774..20467,20597..21008,21166..21372,21477..21594,21756..21957,22139..22412,22513..22765,22923..23038,23160..23615,23703..24270,24336..>24940))	Acanthamoeba castellanii str. Neff	14922883
ACA1_022710	mRNA	ACA1_022710	NW_004457608.1	25616	27871	D	ACA1_022710	join(<25616..25718,25834..25889,26137..26407,26633..26772,26875..27150,27202..27716,27742..>27871)	Acanthamoeba castellanii str. Neff	14922884
ACA1_022720	mRNA	ACA1_022720	NW_004457608.1	28849	29486	R	ACA1_022720	complement(join(<28849..29136,29331..>29486))	Acanthamoeba castellanii str. Neff	14922885
ACA1_022730	mRNA	ACA1_022730	NW_004457608.1	29941	30793	R	ACA1_022730	complement(join(<29941..29999,30053..30256,30334..30407,30521..30607,30723..>30793))	Acanthamoeba castellanii str. Neff	14922886
ACA1_022850	mRNA	ACA1_022850	NW_004457608.1	35793	41369	R	ACA1_022850	complement(join(<35793..37737,37965..38044,38138..39165,39301..39853,40071..40169,40334..40750,40884..41139,41317..>41369))	Acanthamoeba castellanii str. Neff	14922888
ACA1_348430	mRNA	ACA1_348430	NW_004457607.1	320	1773	R	ACA1_348430	complement(join(<320..572,586..810,831..1321,1336..>1773))	Acanthamoeba castellanii str. Neff	14922879
ACA1_348440	mRNA	ACA1_348440	NW_004457607.1	1859	2569	D	ACA1_348440	join(<1859..2171,2237..2519,2530..>2569)	Acanthamoeba castellanii str. Neff	14922877
ACA1_348550	mRNA	ACA1_348550	NW_004457607.1	9240	9704	D	ACA1_348550	<9240..>9704	Acanthamoeba castellanii str. Neff	14922878
ACA1_045920	mRNA	ACA1_045920	NW_004457606.1	202	469	D	ACA1_045920	join(<202..292,363..>469)	Acanthamoeba castellanii str. Neff	14922876
ACA1_045930	mRNA	ACA1_045930	NW_004457606.1	1799	2922	D	ACA1_045930	join(<1799..2597,2681..>2922)	Acanthamoeba castellanii str. Neff	14922811
ACA1_045940	mRNA	ACA1_045940	NW_004457606.1	7234	8316	D	ACA1_045940	join(<7234..7564,7787..>8316)	Acanthamoeba castellanii str. Neff	14922812
ACA1_045950	mRNA	ACA1_045950	NW_004457606.1	8427	11639	D	ACA1_045950	join(<8427..8544,8624..8816,8911..9053,9151..9536,9620..9790,9861..9968,10096..10608,10791..11335,11414..>11639)	Acanthamoeba castellanii str. Neff	14922813
ACA1_045960	mRNA	ACA1_045960	NW_004457606.1	13624	15956	R	ACA1_045960	complement(join(<13624..13729,13858..13993,14127..14211,14313..14392,14504..14589,14675..14811,15052..15128,15214..15330,15421..15598,15835..15879,15936..>15956))	Acanthamoeba castellanii str. Neff	14922814
ACA1_045970	mRNA	ACA1_045970	NW_004457606.1	16143	17789	D	ACA1_045970	join(<16143..16574,16714..16883,17060..>17789)	Acanthamoeba castellanii str. Neff	14922815
ACA1_045980	mRNA	ACA1_045980	NW_004457606.1	18556	20455	D	ACA1_045980	join(<18556..18696,18800..18846,18970..19085,19218..19381,19448..>20455)	Acanthamoeba castellanii str. Neff	14922816
ACA1_045990	mRNA	ACA1_045990	NW_004457606.1	20621	22072	R	ACA1_045990	complement(join(<20621..20899,20980..21172,21249..21339,21403..21522,21588..21713,21823..>22072))	Acanthamoeba castellanii str. Neff	14922817
ACA1_046010	mRNA	ACA1_046010	NW_004457606.1	28592	31281	D	ACA1_046010	join(<28592..28924,29080..>31281)	Acanthamoeba castellanii str. Neff	14922819
ACA1_046020	mRNA	ACA1_046020	NW_004457606.1	31660	32903	R	ACA1_046020	complement(join(<31660..31776,31899..31964,32045..32121,32206..32263,32380..32511,32597..32734,32862..>32903))	Acanthamoeba castellanii str. Neff	14922820
ACA1_046030	mRNA	ACA1_046030	NW_004457606.1	33176	33855	R	ACA1_046030	complement(join(<33176..33381,33459..>33855))	Acanthamoeba castellanii str. Neff	14922821
ACA1_046040	mRNA	ACA1_046040	NW_004457606.1	34696	35063	D	ACA1_046040	join(<34696..34818,34929..>35063)	Acanthamoeba castellanii str. Neff	14922822
ACA1_046050	mRNA	ACA1_046050	NW_004457606.1	35366	36424	R	ACA1_046050	complement(join(<35366..35859,36109..36220,36338..>36424))	Acanthamoeba castellanii str. Neff	14922823
ACA1_046060	mRNA	ACA1_046060	NW_004457606.1	37052	38076	R	ACA1_046060	complement(join(<37052..37610,37719..37847,37961..>38076))	Acanthamoeba castellanii str. Neff	14922824
ACA1_046070	mRNA	ACA1_046070	NW_004457606.1	38346	39083	D	ACA1_046070	join(<38346..38640,38764..>39083)	Acanthamoeba castellanii str. Neff	14922825
ACA1_046080	mRNA	ACA1_046080	NW_004457606.1	41417	42301	R	ACA1_046080	complement(join(<41417..41591,41729..41833,41921..42006,42077..>42301))	Acanthamoeba castellanii str. Neff	14922826
ACA1_046090	mRNA	ACA1_046090	NW_004457606.1	42501	51604	D	ACA1_046090	join(<42501..42914,43149..43293,43429..43529,43733..43836,43962..44133,44232..44396,44549..44647,44727..44855,44959..45078,45180..45253,45359..45479,45562..45747,45879..46013,46107..46238,46311..46456,46546..46778,46944..47140,47223..47389,47531..47609,47724..47840,47946..48107,48222..48254,48425..48679,48733..48930,49006..49152,49243..49422,49536..49622,49739..49870,49954..50094,50196..50370,50477..50622,50863..50970,51166..51260,51360..51498,51569..>51604)	Acanthamoeba castellanii str. Neff	14922827
ACA1_046100	mRNA	ACA1_046100	NW_004457606.1	52072	53756	D	ACA1_046100	join(<52072..52762,53201..53337,53388..53488,53618..>53756)	Acanthamoeba castellanii str. Neff	14922828
ACA1_046110	mRNA	ACA1_046110	NW_004457606.1	53916	54936	D	ACA1_046110	join(<53916..53973,54066..54222,54330..54421,54713..>54936)	Acanthamoeba castellanii str. Neff	14922829
ACA1_046120	mRNA	ACA1_046120	NW_004457606.1	55002	56272	R	ACA1_046120	complement(join(<55002..55319,55419..55485,55588..55645,55766..55835,55948..56107,56199..>56272))	Acanthamoeba castellanii str. Neff	14922830
ACA1_046130	mRNA	ACA1_046130	NW_004457606.1	56443	58908	D	ACA1_046130	join(<56443..56472,56620..56655,56880..57011,57100..57288,57376..57545,57657..57753,57875..57934,58031..58140,58234..58361,58480..58526,58594..>58908)	Acanthamoeba castellanii str. Neff	14922831
ACA1_046140	mRNA	ACA1_046140	NW_004457606.1	58940	60886	R	ACA1_046140	complement(join(<58940..59348,59581..60289,60305..60413,60426..60759,60867..>60886))	Acanthamoeba castellanii str. Neff	14922832
ACA1_046150	mRNA	ACA1_046150	NW_004457606.1	61082	63002	R	ACA1_046150	complement(join(<61082..61193,61291..>63002))	Acanthamoeba castellanii str. Neff	14922833
ACA1_046160	mRNA	ACA1_046160	NW_004457606.1	63621	72379	D	ACA1_046160	join(<63621..63734,63853..63936,64113..64265,64371..64513,64600..64769,64848..64971,65056..65243,65332..65417,65489..65634,65742..65890,66007..66146,66225..66306,66450..66577,66700..66850,66940..67045,67173..67322,67489..67635,67773..67840,68005..68201,68347..68513,68625..68716,68812..68928,69032..69151,69269..69393,69489..69689,69764..69877,69974..70078,70162..70267,70352..70464,70558..70682,70816..70882,71009..71158,71264..71381,71478..71688,71779..72108,72214..>72379)	Acanthamoeba castellanii str. Neff	14922834
ACA1_046170	mRNA	ACA1_046170	NW_004457606.1	73400	75836	R	ACA1_046170	complement(join(<73400..73608,73706..73968,74063..74141,74214..74372,74389..74556,74663..75746,75807..>75836))	Acanthamoeba castellanii str. Neff	14922835
ACA1_046390	mRNA	ACA1_046390	NW_004457606.1	84074	92059	R	ACA1_046390	complement(join(<84074..84248,84360..84544,84656..84893,85001..85220,85303..85431,85541..85749,85842..86294,86454..87049,87139..87348,87372..88199,88277..88461,88544..89250,89346..89582,89708..89826,89905..89994,90072..90183,90284..90497,90636..90747,90772..90826,90949..91186,91302..91747,91905..>92059))	Acanthamoeba castellanii str. Neff	14922837
ACA1_046400	mRNA	ACA1_046400	NW_004457606.1	92345	94770	R	ACA1_046400	complement(join(<92345..92628,92706..92870,92988..93075,93113..93182,93287..93393,93488..93571,93661..93857,93956..94081,94170..>94770))	Acanthamoeba castellanii str. Neff	14922838
ACA1_046410	mRNA	ACA1_046410	NW_004457606.1	95434	97349	R	ACA1_046410	complement(join(<95434..95649,95769..95845,95970..96042,96127..96198,96307..96400,96472..96550,96617..96714,96813..96888,96964..97058,97128..97211,97279..>97349))	Acanthamoeba castellanii str. Neff	14922839
ACA1_046420	mRNA	ACA1_046420	NW_004457606.1	97656	102621	R	ACA1_046420	complement(join(<97656..97832,97945..98008,98100..98254,98342..98560,98649..98822,98927..99142,99239..99352,99508..99665,99737..99894,100017..100179,100283..100388,100488..100762,100862..101053,101153..101309,101393..101497,101614..101715,102027..102099,102232..102326,102499..>102621))	Acanthamoeba castellanii str. Neff	14922840
ACA1_046430	mRNA	ACA1_046430	NW_004457606.1	102850	103314	D	ACA1_046430	<102850..>103314	Acanthamoeba castellanii str. Neff	14922841
ACA1_046440	mRNA	ACA1_046440	NW_004457606.1	103460	106603	D	ACA1_046440	join(<103460..103961,104109..104144,104301..104383,104463..104592,104776..104953,105080..105167,105251..105296,105361..105443,105580..105688,105786..105906,105971..106085,106181..106328,106407..>106603)	Acanthamoeba castellanii str. Neff	14922842
ACA1_046450	mRNA	ACA1_046450	NW_004457606.1	106955	107656	D	ACA1_046450	join(<106955..107051,107124..107245,107321..107371,107438..107517,107599..>107656)	Acanthamoeba castellanii str. Neff	14922843
ACA1_046460	mRNA	ACA1_046460	NW_004457606.1	108156	114367	D	ACA1_046460	join(<108156..108275,108348..108642,108798..108947,109030..109518,109585..110003,110078..110248,110322..110441,110516..110635,110837..110966,111043..111321,111401..111762,111873..112070,112157..112307,112388..112531,112627..112749,112842..113065,113148..113247,113388..113526,113612..113856,113979..114136,114251..>114367)	Acanthamoeba castellanii str. Neff	14922844
ACA1_046470	mRNA	ACA1_046470	NW_004457606.1	115070	117473	D	ACA1_046470	join(<115070..115276,115434..115544,115639..115935,116018..116093,116163..116362,116522..116606,116700..116897,116985..117306,117395..>117473)	Acanthamoeba castellanii str. Neff	14922845
ACA1_046480	mRNA	ACA1_046480	NW_004457606.1	117580	121283	R	ACA1_046480	complement(join(<117580..117923,118021..118237,118354..118490,118646..118752,118884..118959,119052..119090,119104..119302,119404..119471,119625..120464,120555..120765,120855..120950,121020..>121283))	Acanthamoeba castellanii str. Neff	14922846
ACA1_046490	mRNA	ACA1_046490	NW_004457606.1	122875	124415	R	ACA1_046490	complement(join(<122875..123034,123148..123278,123356..123412,123501..123552,123577..123719,123809..123904,124023..124166,124281..>124415))	Acanthamoeba castellanii str. Neff	14922847
ACA1_046500	mRNA	ACA1_046500	NW_004457606.1	124603	125606	R	ACA1_046500	complement(join(<124603..125049,125156..125234,125250..125359,125430..>125606))	Acanthamoeba castellanii str. Neff	14922848
ACA1_046510	mRNA	ACA1_046510	NW_004457606.1	125765	129773	R	ACA1_046510	complement(join(<125765..125992,126151..126201,126281..126371,126491..126624,126717..126862,126991..127104,127380..127548,127656..127742,127867..127950,128050..128678,128873..129035,129130..129214,129306..129451,129521..129566,129640..>129773))	Acanthamoeba castellanii str. Neff	14922849
ACA1_046520	mRNA	ACA1_046520	NW_004457606.1	129984	132292	D	ACA1_046520	join(<129984..130182,130280..130326,130404..130618,130726..130815,130932..131391,131529..131817,132081..>132292)	Acanthamoeba castellanii str. Neff	14922850
ACA1_046530	mRNA	ACA1_046530	NW_004457606.1	133512	135002	D	ACA1_046530	join(<133512..133649,133725..133925,133993..134153,134228..134338,134406..134541,134628..>135002)	Acanthamoeba castellanii str. Neff	14922851
ACA1_046540	mRNA	ACA1_046540	NW_004457606.1	135101	137264	D	ACA1_046540	join(<135101..135292,135423..135509,135581..135631,135740..135898,136001..136174,136300..136413,136560..136691,136810..136995,137085..>137264)	Acanthamoeba castellanii str. Neff	14922852
ACA1_046550	mRNA	ACA1_046550	NW_004457606.1	137392	140258	R	ACA1_046550	complement(join(<137392..137530,137627..137894,138000..138298,138397..138500,138619..138858,138979..139101,139280..139453,139533..139641,139740..139801,139941..>140258))	Acanthamoeba castellanii str. Neff	14922853
ACA1_046560	mRNA	ACA1_046560	NW_004457606.1	140439	142374	R	ACA1_046560	complement(join(<140439..140585,140683..140894,140974..141331,141640..141849,141970..142109,142191..142253,142323..>142374))	Acanthamoeba castellanii str. Neff	14922854
ACA1_046570	mRNA	ACA1_046570	NW_004457606.1	142498	145355	D	ACA1_046570	join(<142498..142684,142814..142903,143007..143156,143487..143629,143689..143776,143870..144288,144417..144729,144903..145068,145184..>145355)	Acanthamoeba castellanii str. Neff	14922855
ACA1_046580	mRNA	ACA1_046580	NW_004457606.1	146359	148174	D	ACA1_046580	join(<146359..146734,146871..147828,147949..>148174)	Acanthamoeba castellanii str. Neff	14922856
ACA1_046590	mRNA	ACA1_046590	NW_004457606.1	148603	149967	D	ACA1_046590	join(<148603..148627,148750..148873,148963..149076,149144..149263,149344..149497,149607..149764,149934..>149967)	Acanthamoeba castellanii str. Neff	14922857
ACA1_046600	mRNA	ACA1_046600	NW_004457606.1	150051	151459	D	ACA1_046600	join(<150051..150154,150231..150265,150345..150389,150482..150576,150656..150731,150803..150912,151001..151061,151172..151296,151403..>151459)	Acanthamoeba castellanii str. Neff	14922858
ACA1_046610	mRNA	ACA1_046610	NW_004457606.1	151836	152473	D	ACA1_046610	join(<151836..151905,151983..>152473)	Acanthamoeba castellanii str. Neff	14922859
ACA1_046620	mRNA	ACA1_046620	NW_004457606.1	153066	153497	D	ACA1_046620	join(<153066..153257,153357..>153497)	Acanthamoeba castellanii str. Neff	14922860
ACA1_046630	mRNA	ACA1_046630	NW_004457606.1	153794	155256	R	ACA1_046630	complement(join(<153794..153929,154027..154277,154350..154499,154602..154725,155084..>155256))	Acanthamoeba castellanii str. Neff	14922861
ACA1_046640	mRNA	ACA1_046640	NW_004457606.1	155343	160765	R	ACA1_046640	complement(join(<155343..155521,155666..155783,155865..155959,156000..156174,156548..156645,156731..156885,156969..157087,157241..157389,157599..157731,157810..157899,158091..158179,158269..158297,158482..158647,158725..158803,158883..158962,159045..159099,159294..159399,159467..159679,159778..159881,159980..160047,160139..160210,160344..160477,160557..160632,160699..>160765))	Acanthamoeba castellanii str. Neff	14922862
ACA1_046650	mRNA	ACA1_046650	NW_004457606.1	161177	161781	R	ACA1_046650	complement(join(<161177..161448,161550..>161781))	Acanthamoeba castellanii str. Neff	14922863
ACA1_046660	mRNA	ACA1_046660	NW_004457606.1	161994	167520	D	ACA1_046660	join(<161994..162113,162264..162290,162378..162423,162515..162630,162696..162815,162922..163011,163072..163160,163231..163315,163421..163724,163799..163911,164007..164059,164137..164229,164312..164418,164519..164644,164746..164849,164988..165191,165286..165443,165525..165618,165737..165866,165948..166006,166164..166274,166362..166475,166581..166673,166766..166881,166980..167318,167427..>167520)	Acanthamoeba castellanii str. Neff	14922864
ACA1_046670	mRNA	ACA1_046670	NW_004457606.1	167609	168247	R	ACA1_046670	complement(join(<167609..168099,168178..>168247))	Acanthamoeba castellanii str. Neff	14922865
ACA1_046680	mRNA	ACA1_046680	NW_004457606.1	168613	169585	R	ACA1_046680	complement(join(<168613..168821,168884..168962,169049..169141,169172..169296,169383..169434,169550..>169585))	Acanthamoeba castellanii str. Neff	14922866
ACA1_046690	mRNA	ACA1_046690	NW_004457606.1	170202	171651	D	ACA1_046690	join(<170202..170249,170348..170629,170764..170873,170962..171016,171096..171351,171479..>171651)	Acanthamoeba castellanii str. Neff	14922867
ACA1_046700	mRNA	ACA1_046700	NW_004457606.1	171861	172779	D	ACA1_046700	join(<171861..171986,172132..172318,172415..>172779)	Acanthamoeba castellanii str. Neff	14922868
ACA1_046710	mRNA	ACA1_046710	NW_004457606.1	172876	173747	R	ACA1_046710	complement(join(<172876..173156,173411..>173747))	Acanthamoeba castellanii str. Neff	14922869
ACA1_046720	mRNA	ACA1_046720	NW_004457606.1	174072	174583	D	ACA1_046720	join(<174072..174252,174310..174437,174518..>174583)	Acanthamoeba castellanii str. Neff	14922870
ACA1_046730	mRNA	ACA1_046730	NW_004457606.1	174714	178289	R	ACA1_046730	complement(join(<174714..174833,174903..174976,175061..175120,175237..175345,175427..175479,175549..175640,175767..175860,176020..176185,176281..176460,176547..176672,176742..177092,177210..177328,177396..177455,177538..177613,177749..177883,177977..178009,178104..178141,178232..>178289))	Acanthamoeba castellanii str. Neff	14922871
ACA1_046740	mRNA	ACA1_046740	NW_004457606.1	179316	181600	R	ACA1_046740	complement(join(<179316..179385,179463..179599,179674..179763,179862..179971,180039..180211,180301..180412,180491..180576,180663..180798,180893..181076,181157..>181600))	Acanthamoeba castellanii str. Neff	14922872
ACA1_046850	mRNA	ACA1_046850	NW_004457606.1	184074	184993	R	ACA1_046850	complement(join(<184074..184122,184196..184373,184458..184541,184603..184676,184764..>184993))	Acanthamoeba castellanii str. Neff	14922873
ACA1_046860	mRNA	ACA1_046860	NW_004457606.1	185798	187042	D	ACA1_046860	join(<185798..185855,185937..186030,186139..186198,186293..186369,186439..186516,186590..186681,186723..186864,186945..>187042)	Acanthamoeba castellanii str. Neff	14922874
ACA1_046870	mRNA	ACA1_046870	NW_004457606.1	187147	191932	R	ACA1_046870	complement(join(<187147..187286,187391..187509,187597..187735,187842..187972,188067..188184,188339..188456,188614..188778,188840..188939,189024..189105,189323..190428,190538..190643,190715..190801,190896..191049,191115..191184,191255..191347,191426..191535,191607..191708,191789..>191932))	Acanthamoeba castellanii str. Neff	14922875
ACA1_007720	mRNA	ACA1_007720	NW_004457604.1	56	486	D	ACA1_007720	join(<56..112,196..300,424..>486)	Acanthamoeba castellanii str. Neff	14922809
ACA1_007730	mRNA	ACA1_007730	NW_004457604.1	716	4652	D	ACA1_007730	join(<716..800,883..970,1047..1104,1160..1250,1333..1441,1535..1583,1742..1855,1924..2023,2122..2238,2352..2442,2603..2670,2762..2850,2928..3002,3079..3215,3344..3501,3654..3740,3852..3982,4093..4293,4396..4500,4593..>4652)	Acanthamoeba castellanii str. Neff	14922810
ACA1_007740	mRNA	ACA1_007740	NW_004457604.1	4822	10421	R	ACA1_007740	complement(join(<4822..5127,5150..5829,5923..6053,6209..6316,6446..6537,6635..6777,6865..6994,7071..7163,7252..7341,7436..7554,7644..7782,7844..7912,8019..8118,8220..8345,8465..8958,9118..9234,9335..9483,9784..9929,10345..>10421))	Acanthamoeba castellanii str. Neff	14922804
ACA1_007750	mRNA	ACA1_007750	NW_004457604.1	10988	19803	D	ACA1_007750	join(<10988..11052,11158..12090,12213..12396,12497..12673,12739..12768,12981..13151,13408..13475,13631..13731,13821..13951,14048..14116,14208..14291,14371..14421,14508..14673,14809..14954,15046..15170,15183..15857,16013..16091,16181..17890,17956..18027,18138..18248,18340..18429,18532..18621,18713..18781,18855..19220,19312..19371,19510..>19803)	Acanthamoeba castellanii str. Neff	14922805
ACA1_007760	mRNA	ACA1_007760	NW_004457604.1	20490	26476	D	ACA1_007760	join(<20490..20861,20943..21015,21122..21201,21296..21352,21464..21649,21713..21811,21878..22033,22139..22233,22325..22432,22550..22609,22683..22777,22850..22921,23058..23146,23234..23322,23423..23510,23603..23697,23791..23869,23969..24085,24183..24980,25070..25316,25568..26106,26183..26311,26399..>26476)	Acanthamoeba castellanii str. Neff	14922801
ACA1_007770	mRNA	ACA1_007770	NW_004457604.1	26912	27508	D	ACA1_007770	<26912..>27508	Acanthamoeba castellanii str. Neff	14922802
ACA1_007780	mRNA	ACA1_007780	NW_004457604.1	28059	28635	D	ACA1_007780	join(<28059..28143,28310..28410,28489..>28635)	Acanthamoeba castellanii str. Neff	14922803
ACA1_007790	mRNA	ACA1_007790	NW_004457604.1	28800	30356	R	ACA1_007790	complement(join(<28800..28838,28922..29180,29225..29351,29443..29567,29683..29906,29996..30069,30176..>30356))	Acanthamoeba castellanii str. Neff	14922806
ACA1_007800	mRNA	ACA1_007800	NW_004457604.1	30802	32623	R	ACA1_007800	complement(join(<30802..31155,31317..31412,31533..31646,31713..31781,31893..31975,32054..32146,32217..32418,32495..>32623))	Acanthamoeba castellanii str. Neff	14922807
ACA1_007810	mRNA	ACA1_007810	NW_004457604.1	33132	33461	R	ACA1_007810	complement(<33132..>33461)	Acanthamoeba castellanii str. Neff	14922808
ACA1_337160	mRNA	ACA1_337160	NW_004457603.1	37	538	D	ACA1_337160	join(<37..140,194..306,405..>538)	Acanthamoeba castellanii str. Neff	14922800
ACA1_337170	mRNA	ACA1_337170	NW_004457603.1	644	1586	D	ACA1_337170	join(<644..890,971..1499,1565..>1586)	Acanthamoeba castellanii str. Neff	14922792
ACA1_337280	mRNA	ACA1_337280	NW_004457603.1	4380	4946	D	ACA1_337280	<4380..>4946	Acanthamoeba castellanii str. Neff	14922793
ACA1_337290	mRNA	ACA1_337290	NW_004457603.1	5104	6577	R	ACA1_337290	complement(join(<5104..5335,5404..5615,5687..5972,6051..6256,6332..>6577))	Acanthamoeba castellanii str. Neff	14922794
ACA1_337300	mRNA	ACA1_337300	NW_004457603.1	7365	8122	D	ACA1_337300	join(<7365..7581,7635..7798,7826..>8122)	Acanthamoeba castellanii str. Neff	14922795
ACA1_337310	mRNA	ACA1_337310	NW_004457603.1	8655	9020	D	ACA1_337310	<8655..>9020	Acanthamoeba castellanii str. Neff	14922796
ACA1_337320	mRNA	ACA1_337320	NW_004457603.1	9340	10191	D	ACA1_337320	join(<9340..9550,9625..9692,9801..9921,10040..>10191)	Acanthamoeba castellanii str. Neff	14922797
ACA1_337330	mRNA	ACA1_337330	NW_004457603.1	10493	10672	R	ACA1_337330	complement(join(<10493..10633,10655..>10672))	Acanthamoeba castellanii str. Neff	14922798
ACA1_029510	mRNA	ACA1_029510	NW_004457602.1	124	1992	R	ACA1_029510	complement(join(<124..339,435..530,633..871,951..1069,1170..1318,1465..1511,1616..1711,1830..>1992))	Acanthamoeba castellanii str. Neff	14922790
ACA1_029520	mRNA	ACA1_029520	NW_004457602.1	2255	3043	D	ACA1_029520	join(<2255..2619,2734..>3043)	Acanthamoeba castellanii str. Neff	14922791
ACA1_029530	mRNA	ACA1_029530	NW_004457602.1	4860	5650	D	ACA1_029530	join(<4860..5218,5338..5418,5452..>5650)	Acanthamoeba castellanii str. Neff	14922788
ACA1_029640	mRNA	ACA1_029640	NW_004457602.1	9127	11773	R	ACA1_029640	complement(join(<9127..9132,9198..9393,9460..9539,9618..9773,9842..10209,10291..10379,10460..10578,10650..10989,11116..11177,11302..11549,11650..>11773))	Acanthamoeba castellanii str. Neff	14922789
ACA1_017430	mRNA	ACA1_017430	NW_004457601.1	487	3321	D	ACA1_017430	join(<487..609,765..854,929..999,1111..1199,1348..1443,3024..3074,3155..>3321)	Acanthamoeba castellanii str. Neff	14922787
ACA1_017540	mRNA	ACA1_017540	NW_004457601.1	3422	10683	R	ACA1_017540	complement(join(<3422..3516,3616..4121,9522..9614,9625..9740,9817..9915,10009..>10683))	Acanthamoeba castellanii str. Neff	14922786
ACA1_343130	mRNA	ACA1_343130	NW_004457599.1	710	1296	D	ACA1_343130	join(<710..781,889..>1296)	Acanthamoeba castellanii str. Neff	14922785
ACA1_343140	mRNA	ACA1_343140	NW_004457599.1	1421	2919	R	ACA1_343140	complement(join(<1421..1565,1657..1724,1815..1909,1997..2071,2252..2345,2404..2498,2582..2705,2815..>2919))	Acanthamoeba castellanii str. Neff	14922782
ACA1_343150	mRNA	ACA1_343150	NW_004457599.1	3164	4358	D	ACA1_343150	join(<3164..3491,3579..3839,3877..>4358)	Acanthamoeba castellanii str. Neff	14922783
ACA1_343160	mRNA	ACA1_343160	NW_004457599.1	7186	7665	D	ACA1_343160	join(<7186..7343,7419..>7665)	Acanthamoeba castellanii str. Neff	14922780
ACA1_343170	mRNA	ACA1_343170	NW_004457599.1	8040	10721	R	ACA1_343170	complement(join(<8040..8367,8529..8661,8784..8913,9071..9171,9275..9362,9456..9506,9606..9863,9933..9999,10087..10468,10538..>10721))	Acanthamoeba castellanii str. Neff	14922781
ACA1_343180	mRNA	ACA1_343180	NW_004457599.1	11880	13690	R	ACA1_343180	complement(join(<11880..11998,12088..12198,12270..12370,12463..12545,12626..12741,12847..12960,13050..13371,13604..>13690))	Acanthamoeba castellanii str. Neff	14922784
ACA1_343290	mRNA	ACA1_343290	NW_004457599.1	15192	15951	D	ACA1_343290	join(<15192..15395,15454..15622,15700..15834,15923..>15951)	Acanthamoeba castellanii str. Neff	14922779
ACA1_343300	mRNA	ACA1_343300	NW_004457599.1	16064	20978	R	ACA1_343300	complement(join(<16064..16152,16229..16729,16836..17018,17110..17201,17285..17466,17537..17696,17768..17853,17924..18014,18113..18234,18323..18404,18474..18541,18621..18695,18768..18836,18922..19072,19149..19258,19346..19446,19527..19593,19674..19722,19802..19861,19947..20122,20192..20271,20333..20412,20485..>20978))	Acanthamoeba castellanii str. Neff	14922775
ACA1_343310	mRNA	ACA1_343310	NW_004457599.1	21171	23996	R	ACA1_343310	complement(join(<21171..21316,21389..21512,21589..21601,21775..21920,21994..22152,22235..22326,22413..22529,22608..22646,22915..23007,23079..23188,23273..23405,23506..23565,23681..23739,23845..>23996))	Acanthamoeba castellanii str. Neff	14922776
ACA1_343620	mRNA	ACA1_343620	NW_004457599.1	26405	27008	R	ACA1_343620	complement(join(<26405..26537,26625..26719,26781..26867,26937..>27008))	Acanthamoeba castellanii str. Neff	14922777
ACA1_343730	mRNA	ACA1_343730	NW_004457599.1	28774	31096	D	ACA1_343730	join(<28774..28895,28973..29071,29151..29282,30503..30718,30801..>31096)	Acanthamoeba castellanii str. Neff	14922778
ACA1_384000	mRNA	ACA1_384000	NW_004457598.1	222	1757	D	ACA1_384000	join(<222..427,517..823,934..1003,1101..1312,1401..1566,1654..>1757)	Acanthamoeba castellanii str. Neff	14922774
ACA1_384010	mRNA	ACA1_384010	NW_004457598.1	2753	5332	R	ACA1_384010	complement(join(<2753..2803,2871..2950,3031..3079,3177..3241,3318..3407,3485..3615,3683..3739,3891..3978,4072..4169,4251..4316,4399..4527,4622..4738,4838..4921,4991..5109,5252..>5332))	Acanthamoeba castellanii str. Neff	14922612
ACA1_384020	mRNA	ACA1_384020	NW_004457598.1	5789	6226	D	ACA1_384020	join(<5789..5946,6079..>6226)	Acanthamoeba castellanii str. Neff	14922613
ACA1_384030	mRNA	ACA1_384030	NW_004457598.1	6567	8153	D	ACA1_384030	join(<6567..6682,6801..6938,7049..7262,7331..7451,7541..7632,7710..>8153)	Acanthamoeba castellanii str. Neff	14922614
ACA1_384040	mRNA	ACA1_384040	NW_004457598.1	8486	10590	R	ACA1_384040	complement(join(<8486..8655,8779..8834,8925..8989,9084..9167,9252..9317,9396..9449,9548..9610,9708..9770,9848..9909,9992..10038,10158..10273,10483..>10590))	Acanthamoeba castellanii str. Neff	14922615
ACA1_384050	mRNA	ACA1_384050	NW_004457598.1	10955	11693	D	ACA1_384050	join(<10955..11062,11166..11201,11317..11492,11588..>11693)	Acanthamoeba castellanii str. Neff	14922616
ACA1_384060	mRNA	ACA1_384060	NW_004457598.1	11762	12198	D	ACA1_384060	join(<11762..11992,12055..>12198)	Acanthamoeba castellanii str. Neff	14922607
ACA1_384070	mRNA	ACA1_384070	NW_004457598.1	12440	15676	D	ACA1_384070	join(<12440..12827,12937..13995,14087..14167,14273..14386,14492..14571,14678..>15676)	Acanthamoeba castellanii str. Neff	14922608
ACA1_384080	mRNA	ACA1_384080	NW_004457598.1	15741	16292	R	ACA1_384080	complement(join(<15741..15848,15943..16145,16283..>16292))	Acanthamoeba castellanii str. Neff	14922609
ACA1_384090	mRNA	ACA1_384090	NW_004457598.1	17657	19373	R	ACA1_384090	complement(join(<17657..17722,17785..17872,17987..18116,18215..18287,18371..18560,18667..18925,19001..19134,19222..>19373))	Acanthamoeba castellanii str. Neff	14922610
ACA1_384100	mRNA	ACA1_384100	NW_004457598.1	19582	20806	R	ACA1_384100	complement(join(<19582..19732,19841..20017,20088..20163,20304..20369,20465..20510,20663..>20806))	Acanthamoeba castellanii str. Neff	14922611
ACA1_384210	mRNA	ACA1_384210	NW_004457598.1	21552	22249	R	ACA1_384210	complement(join(<21552..21665,21725..21915,21993..22057,22176..>22249))	Acanthamoeba castellanii str. Neff	14922617
ACA1_384320	mRNA	ACA1_384320	NW_004457598.1	23821	27260	D	ACA1_384320	join(<23821..23916,24004..24112,24183..24372,24444..24572,24684..24806,25132..25228,25391..25689,25760..25888,25979..26101,26382..26487,26558..26856,26927..27055,27128..>27260)	Acanthamoeba castellanii str. Neff	14922618
ACA1_384330	mRNA	ACA1_384330	NW_004457598.1	27382	28802	D	ACA1_384330	join(<27382..27746,27813..27868,27946..28021,28120..28163,28241..28328,28399..28458,28545..28600,28705..>28802)	Acanthamoeba castellanii str. Neff	14922619
ACA1_384340	mRNA	ACA1_384340	NW_004457598.1	29022	30447	D	ACA1_384340	join(<29022..29119,29424..29529,29599..29670,29992..30081,30120..30229,30300..>30447)	Acanthamoeba castellanii str. Neff	14922620
ACA1_384350	mRNA	ACA1_384350	NW_004457598.1	30811	32310	D	ACA1_384350	join(<30811..31061,31134..31234,31302..31406,31481..31621,31724..31782,31868..32110,32185..>32310)	Acanthamoeba castellanii str. Neff	14922621
ACA1_384360	mRNA	ACA1_384360	NW_004457598.1	32532	33281	R	ACA1_384360	complement(join(<32532..32661,32737..32826,32914..32995,33185..>33281))	Acanthamoeba castellanii str. Neff	14922622
ACA1_384370	mRNA	ACA1_384370	NW_004457598.1	33448	34035	R	ACA1_384370	complement(<33448..>34035)	Acanthamoeba castellanii str. Neff	14922623
ACA1_384380	mRNA	ACA1_384380	NW_004457598.1	34463	35630	D	ACA1_384380	join(<34463..34506,34646..34696,34799..34894,34998..35070,35295..35394,35482..>35630)	Acanthamoeba castellanii str. Neff	14922624
ACA1_384400	mRNA	ACA1_384400	NW_004457598.1	36718	38508	R	ACA1_384400	complement(join(<36718..36842,36937..37111,37435..37511,37606..37758,37889..37965,38038..38161,38289..>38508))	Acanthamoeba castellanii str. Neff	14922626
ACA1_384510	mRNA	ACA1_384510	NW_004457598.1	38722	39320	R	ACA1_384510	complement(join(<38722..38985,39086..39167,39229..>39320))	Acanthamoeba castellanii str. Neff	14922627
ACA1_384520	mRNA	ACA1_384520	NW_004457598.1	39422	40669	R	ACA1_384520	complement(join(<39422..39553,39624..39699,39804..39865,39992..40072,40214..40275,40367..40464,40587..>40669))	Acanthamoeba castellanii str. Neff	14922628
ACA1_384530	mRNA	ACA1_384530	NW_004457598.1	41006	42715	D	ACA1_384530	join(<41006..41067,41132..41167,41290..41484,41592..41638,41785..41903,41991..42455,42557..>42715)	Acanthamoeba castellanii str. Neff	14922629
ACA1_384550	mRNA	ACA1_384550	NW_004457598.1	44788	46165	D	ACA1_384550	join(<44788..44824,45146..45267,45393..45482,45629..45806,45909..46000,46073..>46165)	Acanthamoeba castellanii str. Neff	14922631
ACA1_384560	mRNA	ACA1_384560	NW_004457598.1	46775	49902	D	ACA1_384560	join(<46775..46787,46832..47028,47057..47789,47895..48166,48247..48316,48448..48593,48690..49106,49147..49572,49660..>49902)	Acanthamoeba castellanii str. Neff	14922632
ACA1_384570	mRNA	ACA1_384570	NW_004457598.1	50211	54700	R	ACA1_384570	complement(join(<50211..50291,50403..50614,50718..50880,51024..51349,51428..51642,51783..51920,52007..52183,52261..52360,52518..52661,52779..52920,53013..53148,53287..53394,53485..53662,53782..53853,53938..54349,54464..>54700))	Acanthamoeba castellanii str. Neff	14922633
ACA1_384580	mRNA	ACA1_384580	NW_004457598.1	54814	58546	R	ACA1_384580	complement(join(<54814..55350,55440..55587,55659..55750,55836..56105,56289..56656,56737..56887,56982..57632,57757..57857,57970..58321,58484..>58546))	Acanthamoeba castellanii str. Neff	14922634
ACA1_384590	mRNA	ACA1_384590	NW_004457598.1	59538	60872	R	ACA1_384590	complement(join(<59538..59547,59636..59739,59810..59863,59961..60038,60121..60196,60321..60340,60421..60468,60573..60667,60761..>60872))	Acanthamoeba castellanii str. Neff	14922635
ACA1_384600	mRNA	ACA1_384600	NW_004457598.1	61335	63297	R	ACA1_384600	complement(join(<61335..61480,61552..61639,61723..61769,61848..62341,62440..62654,62743..62928,63025..>63297))	Acanthamoeba castellanii str. Neff	14922636
ACA1_384610	mRNA	ACA1_384610	NW_004457598.1	64280	65800	R	ACA1_384610	complement(<64280..>65800)	Acanthamoeba castellanii str. Neff	14922637
ACA1_384620	mRNA	ACA1_384620	NW_004457598.1	66048	68084	R	ACA1_384620	complement(join(<66048..66386,66467..66549,66632..66795,66868..66995,67103..67222,67257..67285,67359..67423,67499..67573,67666..67766,67839..67950,68056..>68084))	Acanthamoeba castellanii str. Neff	14922638
ACA1_384630	mRNA	ACA1_384630	NW_004457598.1	68522	71006	R	ACA1_384630	complement(join(<68522..68583,68675..68754,68827..68931,69041..69121,69192..69405,69481..69558,69662..69727,69802..69887,69968..70071,70170..70288,70388..70443,70534..70592,70688..70732,70908..>71006))	Acanthamoeba castellanii str. Neff	14922639
ACA1_384640	mRNA	ACA1_384640	NW_004457598.1	71291	76294	R	ACA1_384640	complement(join(<71291..71389,71490..71694,71772..71888,71955..72052,72144..72237,72312..72443,72550..72671,72756..72890,72981..73025,73206..73239,73332..73463,73563..73624,73740..73794,73887..74008,74171..74299,74411..74545,74634..74743,74855..74938,75075..75219,75335..75586,75770..>76294))	Acanthamoeba castellanii str. Neff	14922640
ACA1_384650	mRNA	ACA1_384650	NW_004457598.1	76881	78432	R	ACA1_384650	complement(join(<76881..76897,76990..77092,77136..77207,77287..77381,77455..77530,77624..77689,77760..77840,77936..77962,78042..78157,78185..78209,78325..>78432))	Acanthamoeba castellanii str. Neff	14922641
ACA1_384660	mRNA	ACA1_384660	NW_004457598.1	78591	79943	D	ACA1_384660	join(<78591..79574,79668..>79943)	Acanthamoeba castellanii str. Neff	14922642
ACA1_384670	mRNA	ACA1_384670	NW_004457598.1	80317	80895	D	ACA1_384670	join(<80317..80389,80543..>80895)	Acanthamoeba castellanii str. Neff	14922643
ACA1_384680	mRNA	ACA1_384680	NW_004457598.1	81532	82075	R	ACA1_384680	complement(join(<81532..81616,81728..81824,81961..>82075))	Acanthamoeba castellanii str. Neff	14922644
ACA1_384690	mRNA	ACA1_384690	NW_004457598.1	82702	86006	R	ACA1_384690	complement(join(<82702..83682,83811..85209,85301..85418,85850..>86006))	Acanthamoeba castellanii str. Neff	14922645
ACA1_384700	mRNA	ACA1_384700	NW_004457598.1	87393	90014	D	ACA1_384700	join(<87393..87416,87513..87824,87888..87994,88072..88211,88302..88446,88524..88713,88816..88944,89034..89131,89229..89430,89578..89677,89733..89816,89902..>90014)	Acanthamoeba castellanii str. Neff	14922646
ACA1_384710	mRNA	ACA1_384710	NW_004457598.1	90181	92188	D	ACA1_384710	join(<90181..90342,90480..90624,90742..91416,91490..91658,91744..>92188)	Acanthamoeba castellanii str. Neff	14922647
ACA1_384720	mRNA	ACA1_384720	NW_004457598.1	92427	92912	D	ACA1_384720	join(<92427..92534,92609..92713,92808..>92912)	Acanthamoeba castellanii str. Neff	14922648
ACA1_384740	mRNA	ACA1_384740	NW_004457598.1	93731	95894	R	ACA1_384740	complement(join(<93731..93891,93986..>95894))	Acanthamoeba castellanii str. Neff	14922650
ACA1_384750	mRNA	ACA1_384750	NW_004457598.1	95996	97050	R	ACA1_384750	complement(join(<95996..96122,96212..96442,96466..96479,96625..>97050))	Acanthamoeba castellanii str. Neff	14922651
ACA1_384760	mRNA	ACA1_384760	NW_004457598.1	97647	98797	R	ACA1_384760	complement(join(<97647..97771,97880..97992,98076..98121,98204..98265,98380..98461,98728..>98797))	Acanthamoeba castellanii str. Neff	14922652
ACA1_384770	mRNA	ACA1_384770	NW_004457598.1	99300	99869	D	ACA1_384770	join(<99300..99378,99512..99531,99771..>99869)	Acanthamoeba castellanii str. Neff	14922653
ACA1_384780	mRNA	ACA1_384780	NW_004457598.1	100121	102670	D	ACA1_384780	join(<100121..100259,100447..100963,101073..101287,101346..101879,101988..102157,102298..102465,102563..>102670)	Acanthamoeba castellanii str. Neff	14922654
ACA1_384790	mRNA	ACA1_384790	NW_004457598.1	102847	105246	R	ACA1_384790	complement(join(<102847..102979,103055..103407,103506..103663,103751..103919,103996..104175,104264..104392,104502..104669,104777..104882,105044..>105246))	Acanthamoeba castellanii str. Neff	14922655
ACA1_384800	mRNA	ACA1_384800	NW_004457598.1	105406	107900	D	ACA1_384800	join(<105406..105544,105636..105796,105902..106006,106109..106158,106258..106349,106462..106542,106625..106751,106883..107000,107159..107236,107336..107483,107549..107650,107734..>107900)	Acanthamoeba castellanii str. Neff	14922656
ACA1_384810	mRNA	ACA1_384810	NW_004457598.1	107959	108899	R	ACA1_384810	complement(join(<107959..108259,108384..108695,108728..108825,108858..>108899))	Acanthamoeba castellanii str. Neff	14922657
ACA1_384820	mRNA	ACA1_384820	NW_004457598.1	109079	110306	D	ACA1_384820	join(<109079..109467,109540..109702,109768..110168,110222..>110306)	Acanthamoeba castellanii str. Neff	14922658
ACA1_384830	mRNA	ACA1_384830	NW_004457598.1	110679	111793	R	ACA1_384830	complement(join(<110679..110795,110901..111109,111226..111352,111422..111444,111763..>111793))	Acanthamoeba castellanii str. Neff	14922659
ACA1_384840	mRNA	ACA1_384840	NW_004457598.1	112569	114633	R	ACA1_384840	complement(join(<112569..112618,112731..112813,112907..113019,113106..113208,113555..113764,113924..114089,114175..114319,114445..114489,114568..>114633))	Acanthamoeba castellanii str. Neff	14922660
ACA1_384850	mRNA	ACA1_384850	NW_004457598.1	114856	116489	R	ACA1_384850	complement(join(<114856..115091,115198..115291,115367..115465,115564..115706,115817..115947,116057..116234,116342..>116489))	Acanthamoeba castellanii str. Neff	14922661
ACA1_384860	mRNA	ACA1_384860	NW_004457598.1	116887	117786	D	ACA1_384860	join(<116887..117117,117184..117276,117366..117424,117504..117596,117696..>117786)	Acanthamoeba castellanii str. Neff	14922662
ACA1_384870	mRNA	ACA1_384870	NW_004457598.1	118228	128938	D	ACA1_384870	join(<118228..118851,118975..119119,119192..119422,119503..119627,119711..119783,119852..120477,120616..120945,120960..121137,121209..121611,121679..121840,121915..122040,122130..122293,122391..122502,122596..122708,122795..122909,122995..123073,123135..124832,124901..125241,125368..125572,125652..125761,125823..125930,126013..126136,126220..126472,126584..126947,127043..127155,127221..127313,127389..127561,127635..127760,127867..128026,128097..128421,128512..>128938)	Acanthamoeba castellanii str. Neff	14922663
ACA1_384880	mRNA	ACA1_384880	NW_004457598.1	129978	130917	D	ACA1_384880	join(<129978..130026,130102..130217,130312..130547,130686..>130917)	Acanthamoeba castellanii str. Neff	14922664
ACA1_384990	mRNA	ACA1_384990	NW_004457598.1	131403	132910	D	ACA1_384990	join(<131403..131420,131771..131950,132022..132564,132713..>132910)	Acanthamoeba castellanii str. Neff	14922665
ACA1_385100	mRNA	ACA1_385100	NW_004457598.1	133726	135589	R	ACA1_385100	complement(join(<133726..133825,133911..134052,134251..134403,134488..134613,134683..134848,134982..135163,135261..135423,135515..>135589))	Acanthamoeba castellanii str. Neff	14922666
ACA1_385110	mRNA	ACA1_385110	NW_004457598.1	135739	136327	R	ACA1_385110	complement(join(<135739..136057,136173..>136327))	Acanthamoeba castellanii str. Neff	14922667
ACA1_385120	mRNA	ACA1_385120	NW_004457598.1	137330	139711	D	ACA1_385120	join(<137330..137428,137561..137611,137716..137817,137906..138067,138156..138240,138310..138463,138544..138677,138749..138837,138940..139047,139133..139183,139272..139349,139445..139519,139637..>139711)	Acanthamoeba castellanii str. Neff	14922668
ACA1_385130	mRNA	ACA1_385130	NW_004457598.1	139876	141096	R	ACA1_385130	complement(join(<139876..140147,140251..140417,140508..140844,140952..>141096))	Acanthamoeba castellanii str. Neff	14922669
ACA1_385240	mRNA	ACA1_385240	NW_004457598.1	141640	141846	D	ACA1_385240	<141640..>141846	Acanthamoeba castellanii str. Neff	14922670
ACA1_385350	mRNA	ACA1_385350	NW_004457598.1	144752	145138	D	ACA1_385350	<144752..>145138	Acanthamoeba castellanii str. Neff	14922671
ACA1_385360	mRNA	ACA1_385360	NW_004457598.1	145694	149861	R	ACA1_385360	complement(join(<145694..145732,145817..146039,146174..146283,146392..146547,146663..146791,146864..146965,147057..147116,147190..147395,147498..147740,147812..148117,148211..148346,148449..148580,148687..148801,148882..149024,149117..149305,149382..149473,149567..>149861))	Acanthamoeba castellanii str. Neff	14922672
ACA1_385370	mRNA	ACA1_385370	NW_004457598.1	149923	153920	R	ACA1_385370	complement(join(<149923..150094,150173..150311,150397..150706,150776..150991,151076..151333,151416..151528,151612..151758,151853..151991,152061..152134,152210..152353,152435..152545,152587..152767,153029..153097,153210..153326,153483..>153920))	Acanthamoeba castellanii str. Neff	14922673
ACA1_385380	mRNA	ACA1_385380	NW_004457598.1	154557	156342	R	ACA1_385380	complement(join(<154557..155353,155428..155869,156053..156265,156328..>156342))	Acanthamoeba castellanii str. Neff	14922674
ACA1_385390	mRNA	ACA1_385390	NW_004457598.1	157123	163389	D	ACA1_385390	join(<157123..157150,157259..157438,157508..157594,157699..157871,157971..158370,158443..158873,158971..159420,159517..159920,160015..160350,160439..160793,160895..161704,161804..161972,162080..162138,162244..162418,162665..162929,163030..163120,163288..>163389)	Acanthamoeba castellanii str. Neff	14922675
ACA1_385400	mRNA	ACA1_385400	NW_004457598.1	163610	164647	R	ACA1_385400	complement(join(<163610..163721,163835..163891,163990..164030,164118..164152,164235..164387,164521..>164647))	Acanthamoeba castellanii str. Neff	14922676
ACA1_385410	mRNA	ACA1_385410	NW_004457598.1	165092	169064	D	ACA1_385410	join(<165092..165251,165372..165472,165644..165725,165855..166076,166161..166222,166319..166586,166692..167028,167108..167224,167294..167410,167493..167583,167659..167790,167883..168033,168130..168578,168667..168813,168945..>169064)	Acanthamoeba castellanii str. Neff	14922677
ACA1_385420	mRNA	ACA1_385420	NW_004457598.1	169383	171062	D	ACA1_385420	join(<169383..169729,169859..170051,170136..170236,170367..170418,170504..170672,170815..170945,170979..>171062)	Acanthamoeba castellanii str. Neff	14922678
ACA1_385430	mRNA	ACA1_385430	NW_004457598.1	171209	171874	R	ACA1_385430	complement(join(<171209..171580,171719..>171874))	Acanthamoeba castellanii str. Neff	14922679
ACA1_385440	mRNA	ACA1_385440	NW_004457598.1	171994	174821	R	ACA1_385440	complement(join(<171994..172339,172431..172497,172568..172661,172797..172945,173097..173239,173336..173514,173611..173718,173842..173970,174060..174271,174392..174513,174625..>174821))	Acanthamoeba castellanii str. Neff	14922680
ACA1_385460	mRNA	ACA1_385460	NW_004457598.1	176524	181179	R	ACA1_385460	complement(join(<176524..176586,176664..177082,177199..177306,177383..177557,177635..177781,177870..177951,178121..178215,178293..178362,178446..178509,178622..178691,178773..178875,178938..179020,179087..179155,179236..179322,179412..179478,179545..179708,179795..179860,179953..180016,180089..180174,180270..180368,180479..180550,180634..180695,180797..180868,180990..>181179))	Acanthamoeba castellanii str. Neff	14922682
ACA1_385470	mRNA	ACA1_385470	NW_004457598.1	182097	183848	D	ACA1_385470	<182097..>183848	Acanthamoeba castellanii str. Neff	14922683
ACA1_385480	mRNA	ACA1_385480	NW_004457598.1	184105	185019	R	ACA1_385480	complement(join(<184105..184197,184292..184364,184466..184631,184914..>185019))	Acanthamoeba castellanii str. Neff	14922684
ACA1_385490	mRNA	ACA1_385490	NW_004457598.1	185433	188843	D	ACA1_385490	join(<185433..185607,185835..186043,186174..186332,186431..186508,186592..186720,186827..186940,187038..187109,187217..187502,187516..188628,188710..>188843)	Acanthamoeba castellanii str. Neff	14922685
ACA1_385500	mRNA	ACA1_385500	NW_004457598.1	189364	194144	R	ACA1_385500	complement(join(<189364..189797,189902..189941,190057..190139,190259..190412,190445..190601,190708..190968,191100..191212,191287..191385,191487..191609,191729..191811,191906..192003,192115..192194,192271..192373,192491..192584,192662..192810,192897..193014,193117..193278,193365..193462,193620..193711,193971..>194144))	Acanthamoeba castellanii str. Neff	14922686
ACA1_385510	mRNA	ACA1_385510	NW_004457598.1	195404	196931	D	ACA1_385510	join(<195404..195481,195540..195577,195700..195830,195894..195979,196067..196124,196194..196349,196430..196585,196666..196770,196861..>196931)	Acanthamoeba castellanii str. Neff	14922687
ACA1_385520	mRNA	ACA1_385520	NW_004457598.1	197571	198040	D	ACA1_385520	join(<197571..197611,197681..197844,197925..>198040)	Acanthamoeba castellanii str. Neff	14922688
ACA1_385530	mRNA	ACA1_385530	NW_004457598.1	199005	203138	R	ACA1_385530	complement(join(<199005..199982,200045..200164,200236..200532,200862..201033,201125..201334,201425..201518,201606..201690,201781..201961,202118..202258,202347..202504,202613..202902,202985..>203138))	Acanthamoeba castellanii str. Neff	14922689
ACA1_385540	mRNA	ACA1_385540	NW_004457598.1	203478	206215	R	ACA1_385540	complement(join(<203478..203994,204108..204247,204354..204472,204556..204791,204905..205068,205194..205450,205544..205716,205861..206045,206162..>206215))	Acanthamoeba castellanii str. Neff	14922690
ACA1_385550	mRNA	ACA1_385550	NW_004457598.1	206707	208050	R	ACA1_385550	complement(<206707..>208050)	Acanthamoeba castellanii str. Neff	14922691
ACA1_385560	mRNA	ACA1_385560	NW_004457598.1	208529	210248	R	ACA1_385560	complement(join(<208529..209313,209409..209483,209572..210169,210222..>210248))	Acanthamoeba castellanii str. Neff	14922692
ACA1_385570	mRNA	ACA1_385570	NW_004457598.1	210725	213561	R	ACA1_385570	complement(join(<210725..210952,211031..211159,211278..211400,211493..211614,211695..211764,211847..211926,212021..212043,212164..212263,212341..212448,212531..212674,212820..213087,213210..213266,213415..>213561))	Acanthamoeba castellanii str. Neff	14922693
ACA1_385580	mRNA	ACA1_385580	NW_004457598.1	213727	214436	R	ACA1_385580	complement(join(<213727..213797,213911..>214436))	Acanthamoeba castellanii str. Neff	14922694
ACA1_385590	mRNA	ACA1_385590	NW_004457598.1	214454	214780	R	ACA1_385590	complement(join(<214454..214488,214567..>214780))	Acanthamoeba castellanii str. Neff	14922695
ACA1_385600	mRNA	ACA1_385600	NW_004457598.1	214795	215502	R	ACA1_385600	complement(join(<214795..214896,214974..215166,215267..>215502))	Acanthamoeba castellanii str. Neff	14922696
ACA1_385610	mRNA	ACA1_385610	NW_004457598.1	215899	217262	D	ACA1_385610	join(<215899..216014,216100..216682,216755..216876,216994..217096,217179..>217262)	Acanthamoeba castellanii str. Neff	14922697
ACA1_385620	mRNA	ACA1_385620	NW_004457598.1	217390	218760	R	ACA1_385620	complement(join(<217390..217639,217723..217819,217892..217998,218066..>218760))	Acanthamoeba castellanii str. Neff	14922698
ACA1_385630	mRNA	ACA1_385630	NW_004457598.1	219180	220434	R	ACA1_385630	complement(join(<219180..219415,219493..219620,219728..>220434))	Acanthamoeba castellanii str. Neff	14922699
ACA1_385640	mRNA	ACA1_385640	NW_004457598.1	220947	222671	D	ACA1_385640	join(<220947..221291,221465..221547,221656..221743,221865..221950,222052..222154,222315..222419,222537..>222671)	Acanthamoeba castellanii str. Neff	14922700
ACA1_385650	mRNA	ACA1_385650	NW_004457598.1	223074	227666	D	ACA1_385650	join(<223074..223185,223370..223590,223837..223955,224032..224072,224164..224375,224536..224698,224775..224882,224954..225169,225281..225391,225507..225641,225788..225862,225942..226147,226252..226379,226466..>227666)	Acanthamoeba castellanii str. Neff	14922701
ACA1_385660	mRNA	ACA1_385660	NW_004457598.1	229639	231825	D	ACA1_385660	join(<229639..229660,229677..229813,229898..230757,230857..230961,231053..231311,231410..231532,231652..>231825)	Acanthamoeba castellanii str. Neff	14922702
ACA1_385670	mRNA	ACA1_385670	NW_004457598.1	232094	234789	D	ACA1_385670	join(<232094..232245,232397..232462,232551..232760,232842..232971,233062..233224,233344..233492,233644..233859,233968..>234789)	Acanthamoeba castellanii str. Neff	14922703
ACA1_385680	mRNA	ACA1_385680	NW_004457598.1	235211	236523	D	ACA1_385680	join(<235211..235216,235396..235648,235817..236092,236184..236327,236462..>236523)	Acanthamoeba castellanii str. Neff	14922704
ACA1_385690	mRNA	ACA1_385690	NW_004457598.1	237272	238476	R	ACA1_385690	complement(join(<237272..237675,237754..237935,238014..238264,238399..>238476))	Acanthamoeba castellanii str. Neff	14922705
ACA1_385700	mRNA	ACA1_385700	NW_004457598.1	240824	242506	D	ACA1_385700	join(<240824..240963,241037..241121,241211..241285,241344..241441,241527..241652,241742..241959,242026..242117,242205..242322,242409..>242506)	Acanthamoeba castellanii str. Neff	14922706
ACA1_385710	mRNA	ACA1_385710	NW_004457598.1	242950	247764	R	ACA1_385710	complement(join(<242950..243257,243401..243529,243611..243684,243777..243854,243984..244104,244207..244368,244435..244554,244698..244781,244856..244944,245053..245123,245223..245292,245312..245345,245553..245703,245800..245919,246225..246305,246442..246877,246893..247370,247472..247603,247701..>247764))	Acanthamoeba castellanii str. Neff	14922707
ACA1_385720	mRNA	ACA1_385720	NW_004457598.1	248605	251741	D	ACA1_385720	join(<248605..248724,248891..248971,249089..249189,249324..249496,249635..249819,249921..249992,250072..250141,250276..250366,250428..250530,250633..250753,250860..250978,251056..251202,251301..251436,251560..>251741)	Acanthamoeba castellanii str. Neff	14922708
ACA1_385730	mRNA	ACA1_385730	NW_004457598.1	251834	254480	R	ACA1_385730	complement(join(<251834..251871,251988..252114,252222..252373,252530..252741,252862..252913,252998..253109,253251..253375,253473..253692,253762..253855,253960..254072,254208..254315,254424..>254480))	Acanthamoeba castellanii str. Neff	14922709
ACA1_385740	mRNA	ACA1_385740	NW_004457598.1	254808	255461	D	ACA1_385740	join(<254808..254855,254910..>255461)	Acanthamoeba castellanii str. Neff	14922710
ACA1_385750	mRNA	ACA1_385750	NW_004457598.1	256068	256711	R	ACA1_385750	complement(join(<256068..256080,256106..256197,256266..256359,256438..256556,256592..>256711))	Acanthamoeba castellanii str. Neff	14922711
ACA1_385760	mRNA	ACA1_385760	NW_004457598.1	257101	258203	R	ACA1_385760	complement(join(<257101..257226,257297..257493,257633..257708,257834..258046,258117..>258203))	Acanthamoeba castellanii str. Neff	14922712
ACA1_385770	mRNA	ACA1_385770	NW_004457598.1	259654	262525	R	ACA1_385770	complement(join(<259654..259733,259827..259962,260064..260181,260268..260290,260388..260506,260604..260727,260833..261026,261104..261173,261259..261330,261392..261505,261599..261669,261740..261912,262015..262118,262182..262271,262436..>262525))	Acanthamoeba castellanii str. Neff	14922713
ACA1_385780	mRNA	ACA1_385780	NW_004457598.1	262827	265992	R	ACA1_385780	complement(join(<262827..262972,263060..263339,263438..263556,263620..263770,263897..264090,264161..264233,264339..264410,264476..264589,264727..264797,265021..265387,265556..265645,265861..>265992))	Acanthamoeba castellanii str. Neff	14922714
ACA1_385800	mRNA	ACA1_385800	NW_004457598.1	269322	269796	R	ACA1_385800	complement(join(<269322..269745,269756..>269796))	Acanthamoeba castellanii str. Neff	14922716
ACA1_385810	mRNA	ACA1_385810	NW_004457598.1	270197	275071	D	ACA1_385810	join(<270197..270530,270679..270731,270805..270939,271054..272526,272592..272673,272778..272876,273007..273187,273255..273624,273765..273870,273999..274097,274200..274303,274408..274504,274606..274693,274772..274878,274965..>275071)	Acanthamoeba castellanii str. Neff	14922717
ACA1_385820	mRNA	ACA1_385820	NW_004457598.1	275435	278553	D	ACA1_385820	join(<275435..275493,275596..275647,275663..275715,275810..275885,275958..276019,276119..276193,276280..276350,276410..276532,276616..276682,276772..276919,277003..277097,277193..277491,277580..277703,277783..277913,278002..278162,278257..>278553)	Acanthamoeba castellanii str. Neff	14922718
ACA1_385830	mRNA	ACA1_385830	NW_004457598.1	278770	281427	D	ACA1_385830	join(<278770..279015,279278..279415,279480..279631,279736..279898,279969..280091,280168..280267,280370..280467,280552..280783,280858..280953,281036..281147,281244..>281427)	Acanthamoeba castellanii str. Neff	14922719
ACA1_385840	mRNA	ACA1_385840	NW_004457598.1	281763	283541	D	ACA1_385840	join(<281763..281853,281933..282031,282145..282237,282324..282388,282451..282559,282724..282847,283120..283175,283408..>283541)	Acanthamoeba castellanii str. Neff	14922720
ACA1_385850	mRNA	ACA1_385850	NW_004457598.1	284133	287771	D	ACA1_385850	join(<284133..284153,284262..284385,284605..284742,284951..285088,285201..285224,285287..285418,285611..285736,285818..285844,285927..286040,286107..286133,286231..286268,286402..286558,286652..286759,286793..286999,287075..287153,287229..287494,287554..>287771)	Acanthamoeba castellanii str. Neff	14922721
ACA1_385860	mRNA	ACA1_385860	NW_004457598.1	287888	291975	D	ACA1_385860	join(<287888..288007,288044..288135,288276..288372,288470..288612,288720..288860,288968..289052,289135..289304,289424..289556,289619..289705,289773..289867,289966..290147,290237..290315,290379..290444,290512..290680,290782..290960,291045..291139,291238..291434,291558..291683,291829..>291975)	Acanthamoeba castellanii str. Neff	14922722
ACA1_385870	mRNA	ACA1_385870	NW_004457598.1	292894	294828	R	ACA1_385870	complement(join(<292894..293677,293897..294055,294157..294496,294642..>294828))	Acanthamoeba castellanii str. Neff	14922723
ACA1_385880	mRNA	ACA1_385880	NW_004457598.1	295311	301691	R	ACA1_385880	complement(join(<295311..295457,295532..295659,295767..295926,296051..296186,296268..296842,296951..297066,297183..298329,298366..298423,298509..299198,299293..299397,299465..299513,299606..299731,299751..300043,300110..300335,300409..300674,300749..300827,300904..301029,301132..301242,301329..301533,301632..>301691))	Acanthamoeba castellanii str. Neff	14922724
ACA1_385890	mRNA	ACA1_385890	NW_004457598.1	302447	303191	R	ACA1_385890	complement(join(<302447..302460,302484..302615,302698..302721,302801..302935,303024..303047,303149..>303191))	Acanthamoeba castellanii str. Neff	14922725
ACA1_385900	mRNA	ACA1_385900	NW_004457598.1	304863	305399	D	ACA1_385900	<304863..>305399	Acanthamoeba castellanii str. Neff	14922726
ACA1_385910	mRNA	ACA1_385910	NW_004457598.1	305933	306640	D	ACA1_385910	join(<305933..306289,306575..>306640)	Acanthamoeba castellanii str. Neff	14922727
ACA1_385920	mRNA	ACA1_385920	NW_004457598.1	307162	310985	R	ACA1_385920	complement(join(<307162..307382,307482..307747,307826..307904,307990..308130,308234..308344,308441..308501,308564..308598,308720..308785,308981..309094,309215..309241,309314..309436,309520..309546,309614..309745,309817..309840,309951..310088,310285..310422,310645..310768,310965..>310985))	Acanthamoeba castellanii str. Neff	14922728
ACA1_385930	mRNA	ACA1_385930	NW_004457598.1	311251	312624	R	ACA1_385930	complement(join(<311251..311638,311770..311986,312089..312157,312237..312321,312439..>312624))	Acanthamoeba castellanii str. Neff	14922729
ACA1_385940	mRNA	ACA1_385940	NW_004457598.1	312776	314490	D	ACA1_385940	join(<312776..312955,313084..313171,313250..313318,313434..313650,313762..314052,314472..>314490)	Acanthamoeba castellanii str. Neff	14922730
ACA1_386050	mRNA	ACA1_386050	NW_004457598.1	314712	315086	D	ACA1_386050	<314712..>315086	Acanthamoeba castellanii str. Neff	14922731
ACA1_386060	mRNA	ACA1_386060	NW_004457598.1	315188	315580	R	ACA1_386060	complement(<315188..>315580)	Acanthamoeba castellanii str. Neff	14922732
ACA1_386070	mRNA	ACA1_386070	NW_004457598.1	315633	316166	D	ACA1_386070	join(<315633..315637,315764..>316166)	Acanthamoeba castellanii str. Neff	14922733
ACA1_386080	mRNA	ACA1_386080	NW_004457598.1	317096	317475	D	ACA1_386080	join(<317096..317290,317371..>317475)	Acanthamoeba castellanii str. Neff	14922734
ACA1_386090	mRNA	ACA1_386090	NW_004457598.1	317561	318025	D	ACA1_386090	<317561..>318025	Acanthamoeba castellanii str. Neff	14922735
ACA1_386100	mRNA	ACA1_386100	NW_004457598.1	318658	319559	R	ACA1_386100	complement(join(<318658..318915,318966..319085,319288..319398,319488..>319559))	Acanthamoeba castellanii str. Neff	14922736
ACA1_386210	mRNA	ACA1_386210	NW_004457598.1	320442	321048	D	ACA1_386210	join(<320442..320762,320908..>321048)	Acanthamoeba castellanii str. Neff	14922737
ACA1_386220	mRNA	ACA1_386220	NW_004457598.1	321159	321632	R	ACA1_386220	complement(<321159..>321632)	Acanthamoeba castellanii str. Neff	14922738
ACA1_386230	mRNA	ACA1_386230	NW_004457598.1	321684	322272	R	ACA1_386230	complement(join(<321684..322051,322098..>322272))	Acanthamoeba castellanii str. Neff	14922739
ACA1_386240	mRNA	ACA1_386240	NW_004457598.1	323456	327641	R	ACA1_386240	complement(join(<323456..323505,323662..324280,324365..324657,324741..324921,325013..325320,325431..325506,325618..325860,326150..326360,326663..326765,326955..327057,327129..>327641))	Acanthamoeba castellanii str. Neff	14922740
ACA1_386350	mRNA	ACA1_386350	NW_004457598.1	328224	332702	R	ACA1_386350	complement(join(<328224..328300,328474..328545,328726..328854,328955..329285,329367..329462,329556..329745,329852..330013,330114..330251,330380..330472,330581..330696,330801..330934,331018..331105,331216..331315,331437..332002,332211..332441,332622..>332702))	Acanthamoeba castellanii str. Neff	14922741
ACA1_386360	mRNA	ACA1_386360	NW_004457598.1	333683	335221	D	ACA1_386360	join(<333683..333950,334091..334456,334540..334860,335013..>335221)	Acanthamoeba castellanii str. Neff	14922742
ACA1_386370	mRNA	ACA1_386370	NW_004457598.1	335744	337792	D	ACA1_386370	join(<335744..335848,336073..336540,336618..336681,336788..336880,336963..337082,337140..337273,337411..337526,337696..>337792)	Acanthamoeba castellanii str. Neff	14922743
ACA1_386380	mRNA	ACA1_386380	NW_004457598.1	337890	345108	D	ACA1_386380	join(<337890..338296,338392..338581,338678..338773,338885..339099,339222..339376,339498..339698,339823..340673,340790..340907,341004..341106,341239..341449,341540..341672,341807..342121,342233..342364,342496..342834,342928..343223,343301..343776,343862..343949,344052..344651,344764..344874,344962..>345108)	Acanthamoeba castellanii str. Neff	14922744
ACA1_386390	mRNA	ACA1_386390	NW_004457598.1	346529	348552	D	ACA1_386390	join(<346529..346633,346832..347219,347258..347814,347893..>348552)	Acanthamoeba castellanii str. Neff	14922745
ACA1_386400	mRNA	ACA1_386400	NW_004457598.1	348620	349197	R	ACA1_386400	complement(join(<348620..348928,348985..>349197))	Acanthamoeba castellanii str. Neff	14922746
ACA1_386410	mRNA	ACA1_386410	NW_004457598.1	349897	350262	D	ACA1_386410	<349897..>350262	Acanthamoeba castellanii str. Neff	14922747
ACA1_386420	mRNA	ACA1_386420	NW_004457598.1	353219	354561	D	ACA1_386420	join(<353219..353291,353375..353472,353568..353738,353820..353964,354051..354179,354255..354318,354420..>354561)	Acanthamoeba castellanii str. Neff	14922748
ACA1_386430	mRNA	ACA1_386430	NW_004457598.1	354653	354925	R	ACA1_386430	complement(<354653..>354925)	Acanthamoeba castellanii str. Neff	14922749
ACA1_386440	mRNA	ACA1_386440	NW_004457598.1	355433	355915	R	ACA1_386440	complement(<355433..>355915)	Acanthamoeba castellanii str. Neff	14922750
ACA1_386460	mRNA	ACA1_386460	NW_004457598.1	357445	357831	D	ACA1_386460	<357445..>357831	Acanthamoeba castellanii str. Neff	14922752
ACA1_386470	mRNA	ACA1_386470	NW_004457598.1	357927	358516	D	ACA1_386470	join(<357927..358312,358342..>358516)	Acanthamoeba castellanii str. Neff	14922753
ACA1_386480	mRNA	ACA1_386480	NW_004457598.1	358667	359549	R	ACA1_386480	complement(join(<358667..359220,359453..>359549))	Acanthamoeba castellanii str. Neff	14922754
ACA1_386490	mRNA	ACA1_386490	NW_004457598.1	359841	360149	D	ACA1_386490	<359841..>360149	Acanthamoeba castellanii str. Neff	14922755
ACA1_386500	mRNA	ACA1_386500	NW_004457598.1	360898	361200	R	ACA1_386500	complement(<360898..>361200)	Acanthamoeba castellanii str. Neff	14922756
ACA1_386510	mRNA	ACA1_386510	NW_004457598.1	361956	362411	R	ACA1_386510	complement(join(<361956..362195,362253..>362411))	Acanthamoeba castellanii str. Neff	14922757
ACA1_386520	mRNA	ACA1_386520	NW_004457598.1	362487	362813	D	ACA1_386520	<362487..>362813	Acanthamoeba castellanii str. Neff	14922758
ACA1_386530	mRNA	ACA1_386530	NW_004457598.1	363033	363329	R	ACA1_386530	complement(join(<363033..363119,363144..>363329))	Acanthamoeba castellanii str. Neff	14922759
ACA1_386540	mRNA	ACA1_386540	NW_004457598.1	363381	363968	R	ACA1_386540	complement(<363381..>363968)	Acanthamoeba castellanii str. Neff	14922760
ACA1_386550	mRNA	ACA1_386550	NW_004457598.1	365660	366525	R	ACA1_386550	complement(join(<365660..365854,365965..>366525))	Acanthamoeba castellanii str. Neff	14922761
ACA1_386560	mRNA	ACA1_386560	NW_004457598.1	366538	367182	R	ACA1_386560	complement(join(<366538..366854,366872..366891,367013..>367182))	Acanthamoeba castellanii str. Neff	14922762
ACA1_386670	mRNA	ACA1_386670	NW_004457598.1	367950	368150	D	ACA1_386670	<367950..>368150	Acanthamoeba castellanii str. Neff	14922763
ACA1_386680	mRNA	ACA1_386680	NW_004457598.1	368176	368774	D	ACA1_386680	join(<368176..368721,368736..>368774)	Acanthamoeba castellanii str. Neff	14922764
ACA1_386790	mRNA	ACA1_386790	NW_004457598.1	369072	369323	D	ACA1_386790	<369072..>369323	Acanthamoeba castellanii str. Neff	14922765
ACA1_386800	mRNA	ACA1_386800	NW_004457598.1	371539	372140	D	ACA1_386800	join(<371539..371709,371817..>372140)	Acanthamoeba castellanii str. Neff	14922766
ACA1_386810	mRNA	ACA1_386810	NW_004457598.1	373832	374809	D	ACA1_386810	<373832..>374809	Acanthamoeba castellanii str. Neff	14922767
ACA1_386820	mRNA	ACA1_386820	NW_004457598.1	374835	375408	D	ACA1_386820	join(<374835..375126,375272..>375408)	Acanthamoeba castellanii str. Neff	14922768
ACA1_386930	mRNA	ACA1_386930	NW_004457598.1	376294	376917	R	ACA1_386930	complement(join(<376294..376482,376653..376780,376842..>376917))	Acanthamoeba castellanii str. Neff	14922769
ACA1_386940	mRNA	ACA1_386940	NW_004457598.1	377236	377624	R	ACA1_386940	complement(join(<377236..377382,377454..>377624))	Acanthamoeba castellanii str. Neff	14922770
ACA1_386950	mRNA	ACA1_386950	NW_004457598.1	380425	382947	R	ACA1_386950	complement(join(<380425..380432,380596..380791,380913..380992,381088..381223,381314..381406,381486..381619,381725..381846,381908..382186,382241..382355,382467..>382947))	Acanthamoeba castellanii str. Neff	14922771
ACA1_386960	mRNA	ACA1_386960	NW_004457598.1	383578	383916	R	ACA1_386960	complement(join(<383578..383596,383648..>383916))	Acanthamoeba castellanii str. Neff	14922772
ACA1_386970	mRNA	ACA1_386970	NW_004457598.1	384073	384974	R	ACA1_386970	complement(join(<384073..384206,384360..384475,384575..384723,384798..384822,384934..>384974))	Acanthamoeba castellanii str. Neff	14922773
ACA1_225780	mRNA	ACA1_225780	NW_004457596.1	9928	12068	R	ACA1_225780	complement(join(<9928..9939,9993..10235,10310..10543,10625..10684,11781..11878,11969..>12068))	Acanthamoeba castellanii str. Neff	14922420
ACA1_225890	mRNA	ACA1_225890	NW_004457596.1	12502	15001	D	ACA1_225890	join(<12502..12717,12891..12989,13054..13156,13228..13331,13418..13532,13607..13719,13789..13890,13955..14059,14133..14183,14248..14446,14544..>15001)	Acanthamoeba castellanii str. Neff	14922421
ACA1_225900	mRNA	ACA1_225900	NW_004457596.1	17906	20073	D	ACA1_225900	join(<17906..17997,18118..18403,18541..18719,18789..18963,19042..19127,19202..19331,19425..19556,19674..19818,19901..>20073)	Acanthamoeba castellanii str. Neff	14922422
ACA1_225910	mRNA	ACA1_225910	NW_004457596.1	20200	21169	R	ACA1_225910	complement(join(<20200..20388,20458..20520,20642..20741,20832..20983,21071..>21169))	Acanthamoeba castellanii str. Neff	14922423
ACA1_225920	mRNA	ACA1_225920	NW_004457596.1	21303	24121	R	ACA1_225920	complement(join(<21303..21489,21587..21683,21776..21847,21958..22102,22214..22341,22435..22498,22646..22711,22844..22903,22985..23119,23215..23418,23560..23723,23832..23925,24014..>24121))	Acanthamoeba castellanii str. Neff	14922424
ACA1_225940	mRNA	ACA1_225940	NW_004457596.1	26939	27682	R	ACA1_225940	complement(join(<26939..27104,27132..>27682))	Acanthamoeba castellanii str. Neff	14922426
ACA1_225950	mRNA	ACA1_225950	NW_004457596.1	28507	30193	R	ACA1_225950	complement(join(<28507..28934,29020..29164,29249..29368,29462..29557,29639..29711,29773..29833,29899..>30193))	Acanthamoeba castellanii str. Neff	14922427
ACA1_225960	mRNA	ACA1_225960	NW_004457596.1	30337	31952	D	ACA1_225960	join(<30337..30418,30528..30608,30726..30932,31240..31320,31403..31478,31558..31747,31824..>31952)	Acanthamoeba castellanii str. Neff	14922428
ACA1_226070	mRNA	ACA1_226070	NW_004457596.1	33538	33865	D	ACA1_226070	join(<33538..33708,33743..>33865)	Acanthamoeba castellanii str. Neff	14922429
ACA1_226180	mRNA	ACA1_226180	NW_004457596.1	35381	37980	D	ACA1_226180	join(<35381..35445,35578..35831,36111..36205,36298..36401,36468..36627,36688..36847,36948..37169,37247..37257,37268..37409,37484..37575,37656..37823,37858..>37980)	Acanthamoeba castellanii str. Neff	14922430
ACA1_226190	mRNA	ACA1_226190	NW_004457596.1	38160	40792	D	ACA1_226190	join(<38160..38585,38668..38906,38987..39137,39206..39397,39493..39724,39803..40005,40020..40301,40375..40634,40738..>40792)	Acanthamoeba castellanii str. Neff	14922431
ACA1_226200	mRNA	ACA1_226200	NW_004457596.1	41294	42334	D	ACA1_226200	<41294..>42334	Acanthamoeba castellanii str. Neff	14922432
ACA1_226210	mRNA	ACA1_226210	NW_004457596.1	42331	43339	R	ACA1_226210	complement(join(<42331..42506,42641..42705,42787..42893,42972..43066,43135..43195,43265..>43339))	Acanthamoeba castellanii str. Neff	14922433
ACA1_226320	mRNA	ACA1_226320	NW_004457596.1	43877	46270	D	ACA1_226320	join(<43877..44048,44164..44292,44395..44547,44638..44766,44857..44985,45077..45205,45286..45414,45499..45581,45818..>46270)	Acanthamoeba castellanii str. Neff	14922434
ACA1_226430	mRNA	ACA1_226430	NW_004457596.1	46474	46793	R	ACA1_226430	complement(join(<46474..46725,46767..>46793))	Acanthamoeba castellanii str. Neff	14922435
ACA1_226540	mRNA	ACA1_226540	NW_004457596.1	48994	49435	D	ACA1_226540	join(<48994..49108,49224..>49435)	Acanthamoeba castellanii str. Neff	14922436
ACA1_226550	mRNA	ACA1_226550	NW_004457596.1	49705	51947	D	ACA1_226550	join(<49705..50344,50482..50597,50688..50822,50926..51025,51066..51265,51341..51550,51633..51745,51839..>51947)	Acanthamoeba castellanii str. Neff	14922437
ACA1_226670	mRNA	ACA1_226670	NW_004457596.1	53153	53602	R	ACA1_226670	complement(<53153..>53602)	Acanthamoeba castellanii str. Neff	14922439
ACA1_226680	mRNA	ACA1_226680	NW_004457596.1	53798	54357	D	ACA1_226680	join(<53798..54125,54238..54325,54339..>54357)	Acanthamoeba castellanii str. Neff	14922440
ACA1_226690	mRNA	ACA1_226690	NW_004457596.1	54525	56831	R	ACA1_226690	complement(join(<54525..54596,54749..54889,54984..55199,55287..55551,55649..55697,55781..55904,56018..56174,56299..56390,56494..56641,56750..56800,56818..>56831))	Acanthamoeba castellanii str. Neff	14922441
ACA1_226700	mRNA	ACA1_226700	NW_004457596.1	57062	59450	D	ACA1_226700	join(<57062..57149,57229..57354,57430..57578,57679..57897,58005..58202,58283..58478,58580..58666,58761..58922,59003..59102,59192..>59450)	Acanthamoeba castellanii str. Neff	14922442
ACA1_226710	mRNA	ACA1_226710	NW_004457596.1	59540	62010	R	ACA1_226710	complement(join(<59540..60232,60322..60425,60509..60716,60810..60967,61214..61332,61550..>62010))	Acanthamoeba castellanii str. Neff	14922443
ACA1_226720	mRNA	ACA1_226720	NW_004457596.1	63045	64202	R	ACA1_226720	complement(<63045..>64202)	Acanthamoeba castellanii str. Neff	14922444
ACA1_226730	mRNA	ACA1_226730	NW_004457596.1	64747	68794	R	ACA1_226730	complement(join(<64747..64833,64903..65265,65350..65558,65643..65855,65953..66005,66191..66423,66542..66767,66841..66998,67081..67202,67351..67486,67590..67694,67793..67930,67994..68619,68734..>68794))	Acanthamoeba castellanii str. Neff	14922445
ACA1_226740	mRNA	ACA1_226740	NW_004457596.1	68956	69902	R	ACA1_226740	complement(join(<68956..69044,69111..69217,69283..69469,69586..69691,69771..>69902))	Acanthamoeba castellanii str. Neff	14922446
ACA1_226750	mRNA	ACA1_226750	NW_004457596.1	70208	72356	D	ACA1_226750	join(<70208..70352,70475..70716,70813..70963,71054..71093,71393..71529,71638..71759,71887..71973,72237..>72356)	Acanthamoeba castellanii str. Neff	14922447
ACA1_226760	mRNA	ACA1_226760	NW_004457596.1	72719	74681	D	ACA1_226760	join(<72719..72858,72950..73056,73195..73349,73461..73788,73906..>74681)	Acanthamoeba castellanii str. Neff	14922448
ACA1_226770	mRNA	ACA1_226770	NW_004457596.1	74758	76197	R	ACA1_226770	complement(join(<74758..74964,75216..75630,75749..75974,76034..76059,76070..>76197))	Acanthamoeba castellanii str. Neff	14922449
ACA1_226880	mRNA	ACA1_226880	NW_004457596.1	76924	79012	R	ACA1_226880	complement(join(<76924..77130,77280..77615,77779..78008,78068..78093,78104..78272,78360..78628,78708..78852,78889..>79012))	Acanthamoeba castellanii str. Neff	14922450
ACA1_226890	mRNA	ACA1_226890	NW_004457596.1	79169	79596	R	ACA1_226890	complement(join(<79169..79207,79270..79317,79393..>79596))	Acanthamoeba castellanii str. Neff	14922451
ACA1_226900	mRNA	ACA1_226900	NW_004457596.1	79677	80261	R	ACA1_226900	complement(join(<79677..79855,79933..80141,80191..>80261))	Acanthamoeba castellanii str. Neff	14922452
ACA1_227010	mRNA	ACA1_227010	NW_004457596.1	82416	83427	R	ACA1_227010	complement(join(<82416..82661,82740..82835,83015..83128,83215..>83427))	Acanthamoeba castellanii str. Neff	14922453
ACA1_227030	mRNA	ACA1_227030	NW_004457596.1	86635	87258	D	ACA1_227030	join(<86635..86734,86813..86964,87031..>87258)	Acanthamoeba castellanii str. Neff	14922455
ACA1_227050	mRNA	ACA1_227050	NW_004457596.1	88753	90197	D	ACA1_227050	join(<88753..88950,89080..89222,89312..89418,89515..89631,89766..89987,90091..>90197)	Acanthamoeba castellanii str. Neff	14922457
ACA1_227070	mRNA	ACA1_227070	NW_004457596.1	92814	94250	R	ACA1_227070	complement(join(<92814..92903,92996..93118,93318..93375,93457..93542,93842..93953,93989..94084,94144..>94250))	Acanthamoeba castellanii str. Neff	14922459
ACA1_227080	mRNA	ACA1_227080	NW_004457596.1	94537	96281	D	ACA1_227080	join(<94537..94749,94827..94913,95014..95156,95256..95344,95444..95499,95571..95748,95850..95964,96047..>96281)	Acanthamoeba castellanii str. Neff	14922460
ACA1_227090	mRNA	ACA1_227090	NW_004457596.1	96678	97212	D	ACA1_227090	join(<96678..96752,96897..96962,97030..>97212)	Acanthamoeba castellanii str. Neff	14922461
ACA1_227100	mRNA	ACA1_227100	NW_004457596.1	97501	99170	R	ACA1_227100	complement(join(<97501..97715,97817..97952,98120..98230,98297..98419,98485..98617,98697..98785,99099..>99170))	Acanthamoeba castellanii str. Neff	14922462
ACA1_227110	mRNA	ACA1_227110	NW_004457596.1	102416	103107	D	ACA1_227110	join(<102416..102596,102644..102848,102948..>103107)	Acanthamoeba castellanii str. Neff	14922463
ACA1_227120	mRNA	ACA1_227120	NW_004457596.1	103706	104427	D	ACA1_227120	join(<103706..103969,104380..>104427)	Acanthamoeba castellanii str. Neff	14922464
ACA1_227230	mRNA	ACA1_227230	NW_004457596.1	105041	105470	D	ACA1_227230	join(<105041..105165,105248..>105470)	Acanthamoeba castellanii str. Neff	14922465
ACA1_227240	mRNA	ACA1_227240	NW_004457596.1	105674	106476	D	ACA1_227240	join(<105674..105695,105770..105798,105880..105948,106086..106151,106219..106373,106452..>106476)	Acanthamoeba castellanii str. Neff	14922466
ACA1_227250	mRNA	ACA1_227250	NW_004457596.1	106678	107063	R	ACA1_227250	complement(join(<106678..106892,106994..>107063))	Acanthamoeba castellanii str. Neff	14922467
ACA1_227260	mRNA	ACA1_227260	NW_004457596.1	107196	109608	D	ACA1_227260	join(<107196..107887,107989..108113,108180..108263,108395..108546,108706..109125,109147..>109608)	Acanthamoeba castellanii str. Neff	14922468
ACA1_227370	mRNA	ACA1_227370	NW_004457596.1	111322	112864	D	ACA1_227370	join(<111322..111480,111567..111723,111808..111932,112055..112167,112238..112274,112406..>112864)	Acanthamoeba castellanii str. Neff	14922469
ACA1_227590	mRNA	ACA1_227590	NW_004457596.1	118474	118976	D	ACA1_227590	join(<118474..118829,118958..>118976)	Acanthamoeba castellanii str. Neff	14922471
ACA1_227700	mRNA	ACA1_227700	NW_004457596.1	119528	120459	R	ACA1_227700	complement(join(<119528..119581,119623..119783,119870..120035,120121..120218,120354..>120459))	Acanthamoeba castellanii str. Neff	14922472
ACA1_227710	mRNA	ACA1_227710	NW_004457596.1	120734	123087	D	ACA1_227710	join(<120734..120832,120932..121082,121150..121338,121421..>123087)	Acanthamoeba castellanii str. Neff	14922473
ACA1_227720	mRNA	ACA1_227720	NW_004457596.1	124019	124644	R	ACA1_227720	complement(join(<124019..124035,124198..124284,124483..124512,124611..>124644))	Acanthamoeba castellanii str. Neff	14922474
ACA1_227730	mRNA	ACA1_227730	NW_004457596.1	124893	127330	D	ACA1_227730	join(<124893..125183,125312..125421,125548..125608,125741..125842,125954..126064,126166..126269,126388..126574,126697..126816,126896..127061,127203..>127330)	Acanthamoeba castellanii str. Neff	14922475
ACA1_227740	mRNA	ACA1_227740	NW_004457596.1	127654	128615	R	ACA1_227740	complement(join(<127654..127659,127706..127789,127900..128331,128421..>128615))	Acanthamoeba castellanii str. Neff	14922476
ACA1_227750	mRNA	ACA1_227750	NW_004457596.1	129705	131055	D	ACA1_227750	join(<129705..129877,129954..130076,130154..130328,130377..130611,130673..>131055)	Acanthamoeba castellanii str. Neff	14922477
ACA1_227760	mRNA	ACA1_227760	NW_004457596.1	131776	132478	D	ACA1_227760	join(<131776..131928,131961..132006,132131..132189,132356..>132478)	Acanthamoeba castellanii str. Neff	14922478
ACA1_227770	mRNA	ACA1_227770	NW_004457596.1	132701	133838	R	ACA1_227770	complement(join(<132701..132736,132827..132910,133127..133558,133644..>133838))	Acanthamoeba castellanii str. Neff	14922479
ACA1_227780	mRNA	ACA1_227780	NW_004457596.1	134771	137044	D	ACA1_227780	join(<134771..134950,135041..135131,135211..135287,135380..135439,135519..135595,135674..135799,135887..135981,136078..136296,136377..136453,136749..136878,136959..>137044)	Acanthamoeba castellanii str. Neff	14922480
ACA1_227790	mRNA	ACA1_227790	NW_004457596.1	137433	138577	R	ACA1_227790	complement(join(<137433..137556,137619..137750,137814..137947,138010..138080,138202..138312,138388..138458,138522..>138577))	Acanthamoeba castellanii str. Neff	14922481
ACA1_227800	mRNA	ACA1_227800	NW_004457596.1	139483	140061	D	ACA1_227800	join(<139483..139645,139716..139843,139930..>140061)	Acanthamoeba castellanii str. Neff	14922482
ACA1_227810	mRNA	ACA1_227810	NW_004457596.1	140184	142556	D	ACA1_227810	join(<140184..140324,140407..140676,140758..140832,140940..141051,141133..141189,141279..141395,141468..141566,141698..141858,141968..142093,142163..142299,142445..>142556)	Acanthamoeba castellanii str. Neff	14922483
ACA1_227820	mRNA	ACA1_227820	NW_004457596.1	142799	147256	R	ACA1_227820	complement(join(<142799..142920,142990..143107,143242..143391,143496..143591,143789..143893,144002..144100,144198..144275,144349..144437,144595..144690,144794..144833,144995..145114,145236..145820,145928..146017,146108..146272,146369..146544,146773..146943,147058..>147256))	Acanthamoeba castellanii str. Neff	14922484
ACA1_227830	mRNA	ACA1_227830	NW_004457596.1	147849	152913	D	ACA1_227830	join(<147849..148064,148224..148464,148550..148742,148839..148948,149041..149149,149244..149355,149445..149617,149730..149793,151512..151581,151674..151782,151877..151988,152078..152250,152363..152451,152559..152691,152835..>152913)	Acanthamoeba castellanii str. Neff	14922485
ACA1_228040	mRNA	ACA1_228040	NW_004457596.1	153138	155104	D	ACA1_228040	join(<153138..154038,154065..>155104)	Acanthamoeba castellanii str. Neff	14922486
ACA1_228050	mRNA	ACA1_228050	NW_004457596.1	155215	158547	D	ACA1_228050	join(<155215..155334,155412..155553,155698..155803,155891..155989,156110..156170,156186..156280,156411..156496,156558..156648,156725..156807,156917..156985,157195..157520,157689..157966,158126..158220,158386..>158547)	Acanthamoeba castellanii str. Neff	14922487
ACA1_228260	mRNA	ACA1_228260	NW_004457596.1	158855	162115	D	ACA1_228260	join(<158855..158881,159023..159155,159255..159343,159545..159638,159711..159829,159939..160109,160191..160329,160415..160515,160602..160666,160747..160864,160955..161129,161198..161277,161635..161774,161878..162010,162074..>162115)	Acanthamoeba castellanii str. Neff	14922488
ACA1_228370	mRNA	ACA1_228370	NW_004457596.1	164434	165693	R	ACA1_228370	complement(join(<164434..164510,164605..164682,164757..164913,165008..165046,165089..165142,165284..165411,165492..165554,165618..>165693))	Acanthamoeba castellanii str. Neff	14922489
ACA1_228380	mRNA	ACA1_228380	NW_004457596.1	166630	171189	R	ACA1_228380	complement(join(<166630..166653,166710..166861,166943..167003,167071..167175,167279..167370,167452..167550,167644..167751,167845..167954,168037..168147,168234..168406,168492..168584,168655..168725,168812..168929,169058..169142,169199..169295,169360..169408,169681..169745,169811..169871,170123..170271,170366..170492,170573..170730,170825..170907,170981..>171189))	Acanthamoeba castellanii str. Neff	14922490
ACA1_228390	mRNA	ACA1_228390	NW_004457596.1	171257	172568	R	ACA1_228390	complement(join(<171257..171398,171422..171575,171648..171764,171872..171941,172015..172140,172218..172337,172416..>172568))	Acanthamoeba castellanii str. Neff	14922491
ACA1_228400	mRNA	ACA1_228400	NW_004457596.1	172913	173881	R	ACA1_228400	complement(join(<172913..172940,173119..173191,173533..>173881))	Acanthamoeba castellanii str. Neff	14922492
ACA1_228410	mRNA	ACA1_228410	NW_004457596.1	175398	178764	R	ACA1_228410	complement(join(<175398..175429,175507..175663,175753..175832,175913..175996,176065..176169,176777..177162,177243..177277,177290..177369,177454..177603,177667..177759,177829..178002,178094..178198,178256..178341,178395..178535,178613..>178764))	Acanthamoeba castellanii str. Neff	14922493
ACA1_228520	mRNA	ACA1_228520	NW_004457596.1	179783	180528	R	ACA1_228520	complement(join(<179783..179814,179890..180046,180144..180223,180304..180387,180456..>180528))	Acanthamoeba castellanii str. Neff	14922494
ACA1_228630	mRNA	ACA1_228630	NW_004457596.1	181384	183816	D	ACA1_228630	join(<181384..181480,181608..181675,181761..181880,181960..182115,182189..182242,182340..182435,182509..182599,182680..182951,183057..183200,183286..>183816)	Acanthamoeba castellanii str. Neff	14922495
ACA1_228640	mRNA	ACA1_228640	NW_004457596.1	183933	184265	D	ACA1_228640	<183933..>184265	Acanthamoeba castellanii str. Neff	14922496
ACA1_228650	mRNA	ACA1_228650	NW_004457596.1	184399	185644	R	ACA1_228650	complement(join(<184399..184482,184562..184721,184824..184897,185028..185158,185242..185370,185461..>185644))	Acanthamoeba castellanii str. Neff	14922497
ACA1_228660	mRNA	ACA1_228660	NW_004457596.1	185779	187469	R	ACA1_228660	complement(join(<185779..185862,186138..186274,186382..186466,186575..186652,186747..186859,186951..187015,187114..187187,187413..>187469))	Acanthamoeba castellanii str. Neff	14922498
ACA1_228670	mRNA	ACA1_228670	NW_004457596.1	187577	188361	D	ACA1_228670	join(<187577..187703,187773..188026,188137..>188361)	Acanthamoeba castellanii str. Neff	14922499
ACA1_228680	mRNA	ACA1_228680	NW_004457596.1	188590	188965	R	ACA1_228680	complement(join(<188590..188684,188860..>188965))	Acanthamoeba castellanii str. Neff	14922500
ACA1_228690	mRNA	ACA1_228690	NW_004457596.1	189527	192021	D	ACA1_228690	join(<189527..190311,190509..190602,190753..190820,190907..191037,191132..191192,191279..191341,191453..191511,191612..>192021)	Acanthamoeba castellanii str. Neff	14922501
ACA1_228700	mRNA	ACA1_228700	NW_004457596.1	192186	193154	D	ACA1_228700	join(<192186..192608,192630..>193154)	Acanthamoeba castellanii str. Neff	14922502
ACA1_228710	mRNA	ACA1_228710	NW_004457596.1	193387	195324	R	ACA1_228710	complement(join(<193387..193475,193570..193692,193765..193984,194101..194233,194332..194563,194695..194868,195072..>195324))	Acanthamoeba castellanii str. Neff	14922503
ACA1_228720	mRNA	ACA1_228720	NW_004457596.1	195550	197309	D	ACA1_228720	join(<195550..195972,196061..196202,196283..196361,196427..196517,196594..196689,196768..196893,197031..197102,197211..>197309)	Acanthamoeba castellanii str. Neff	14922504
ACA1_228730	mRNA	ACA1_228730	NW_004457596.1	197864	203027	D	ACA1_228730	join(<197864..198450,198681..198801,198882..198971,199090..199186,199285..201088,201163..201276,201364..202429,202609..202697,202786..202850,202954..>203027)	Acanthamoeba castellanii str. Neff	14922505
ACA1_228740	mRNA	ACA1_228740	NW_004457596.1	203468	205071	R	ACA1_228740	complement(join(<203468..203505,203604..203777,203877..203945,204057..204128,204207..204305,204401..204476,204624..204700,204785..204878,204991..>205071))	Acanthamoeba castellanii str. Neff	14922506
ACA1_228750	mRNA	ACA1_228750	NW_004457596.1	205197	206561	D	ACA1_228750	join(<205197..205344,205473..205530,205650..205757,205857..205954,206036..206096,206327..>206561)	Acanthamoeba castellanii str. Neff	14922507
ACA1_228760	mRNA	ACA1_228760	NW_004457596.1	206748	208777	D	ACA1_228760	join(<206748..206817,206943..207043,207124..207190,207275..207319,207407..207487,207605..207702,207790..207829,207925..208041,208143..208247,208350..208564,208685..>208777)	Acanthamoeba castellanii str. Neff	14922508
ACA1_228770	mRNA	ACA1_228770	NW_004457596.1	208881	213198	D	ACA1_228770	join(<208881..209127,209271..209379,209458..209578,209654..209730,209816..209951,210056..210148,210212..210315,210413..210954,211037..211145,211224..211344,211436..211488,211580..211715,211812..211883,211949..212052,212165..212413,212505..>213198)	Acanthamoeba castellanii str. Neff	14922509
ACA1_228780	mRNA	ACA1_228780	NW_004457596.1	213223	213907	R	ACA1_228780	complement(join(<213223..213743,213832..>213907))	Acanthamoeba castellanii str. Neff	14922510
ACA1_228790	mRNA	ACA1_228790	NW_004457596.1	214126	216353	D	ACA1_228790	join(<214126..214323,214411..214543,214630..214757,214897..216146,216248..>216353)	Acanthamoeba castellanii str. Neff	14922511
ACA1_228800	mRNA	ACA1_228800	NW_004457596.1	219475	221327	R	ACA1_228800	complement(join(<219475..219788,219877..220045,220147..220302,220998..221069,221142..>221327))	Acanthamoeba castellanii str. Neff	14922512
ACA1_228910	mRNA	ACA1_228910	NW_004457596.1	221517	224273	D	ACA1_228910	join(<221517..221604,221705..221754,221850..221941,222052..222180,222282..222404,222488..222557,222617..222724,222808..223349,223431..223524,223635..>224273)	Acanthamoeba castellanii str. Neff	14922513
ACA1_228920	mRNA	ACA1_228920	NW_004457596.1	225999	226436	D	ACA1_228920	<225999..>226436	Acanthamoeba castellanii str. Neff	14922514
ACA1_228930	mRNA	ACA1_228930	NW_004457596.1	226630	228537	R	ACA1_228930	complement(join(<226630..226704,226795..227097,227108..227185,227220..227770,227862..227992,228097..228182,228289..>228537))	Acanthamoeba castellanii str. Neff	14922515
ACA1_229040	mRNA	ACA1_229040	NW_004457596.1	230084	230521	R	ACA1_229040	complement(join(<230084..230091,230145..230249,230319..230408,230464..>230521))	Acanthamoeba castellanii str. Neff	14922516
ACA1_229150	mRNA	ACA1_229150	NW_004457596.1	231286	232280	R	ACA1_229150	complement(join(<231286..231294,231362..231448,231591..231716,231796..232048,232147..>232280))	Acanthamoeba castellanii str. Neff	14922517
ACA1_229160	mRNA	ACA1_229160	NW_004457596.1	232548	233778	D	ACA1_229160	join(<232548..232682,232825..233012,233093..233207,233301..233422,233508..233566,233756..>233778)	Acanthamoeba castellanii str. Neff	14922518
ACA1_229170	mRNA	ACA1_229170	NW_004457596.1	235656	237863	D	ACA1_229170	join(<235656..237064,237206..237332,237448..237562,237655..>237863)	Acanthamoeba castellanii str. Neff	14922519
ACA1_229180	mRNA	ACA1_229180	NW_004457596.1	238049	240127	R	ACA1_229180	complement(join(<238049..238115,238193..238355,238441..238526,238653..238711,238801..238916,239018..239167,239285..239366,239456..239601,239707..239826,239926..>240127))	Acanthamoeba castellanii str. Neff	14922520
ACA1_229190	mRNA	ACA1_229190	NW_004457596.1	240284	241446	D	ACA1_229190	join(<240284..240382,240540..240650,240755..240967,241047..241251,241310..>241446)	Acanthamoeba castellanii str. Neff	14922521
ACA1_229200	mRNA	ACA1_229200	NW_004457596.1	241778	242514	R	ACA1_229200	complement(join(<241778..242196,242415..>242514))	Acanthamoeba castellanii str. Neff	14922522
ACA1_229210	mRNA	ACA1_229210	NW_004457596.1	243071	243664	D	ACA1_229210	join(<243071..243082,243175..243459,243545..>243664)	Acanthamoeba castellanii str. Neff	14922523
ACA1_229230	mRNA	ACA1_229230	NW_004457596.1	247169	249161	R	ACA1_229230	complement(join(<247169..247497,247595..247774,247854..248055,248156..248262,248396..248540,248630..248839,248922..>249161))	Acanthamoeba castellanii str. Neff	14922525
ACA1_229250	mRNA	ACA1_229250	NW_004457596.1	250851	251249	D	ACA1_229250	<250851..>251249	Acanthamoeba castellanii str. Neff	14922527
ACA1_229260	mRNA	ACA1_229260	NW_004457596.1	251391	255102	R	ACA1_229260	complement(join(<251391..251528,251646..251792,252010..252083,252194..252337,252349..252510,252599..252706,252856..253198,253326..253942,254033..254203,254300..254374,254469..254570,254649..254715,254797..254913,254986..>255102))	Acanthamoeba castellanii str. Neff	14922528
ACA1_229370	mRNA	ACA1_229370	NW_004457596.1	255682	257013	D	ACA1_229370	join(<255682..255719,255803..255901,256210..256327,256430..256546,256630..256803,256882..>257013)	Acanthamoeba castellanii str. Neff	14922529
ACA1_229480	mRNA	ACA1_229480	NW_004457596.1	258359	258886	D	ACA1_229480	<258359..>258886	Acanthamoeba castellanii str. Neff	14922530
ACA1_229490	mRNA	ACA1_229490	NW_004457596.1	259291	260287	D	ACA1_229490	join(<259291..259611,259692..259928,260000..>260287)	Acanthamoeba castellanii str. Neff	14922531
ACA1_229500	mRNA	ACA1_229500	NW_004457596.1	260645	262120	D	ACA1_229500	<260645..>262120	Acanthamoeba castellanii str. Neff	14922532
ACA1_229510	mRNA	ACA1_229510	NW_004457596.1	262254	263455	D	ACA1_229510	join(<262254..262333,262410..262512,262578..262669,262764..262897,263024..263168,263268..263375,263404..>263455)	Acanthamoeba castellanii str. Neff	14922533
ACA1_229520	mRNA	ACA1_229520	NW_004457596.1	263983	266454	D	ACA1_229520	join(<263983..264086,264371..264383,264506..264545,264657..264688,264778..264873,264946..265087,265180..265309,265391..265514,265622..265759,265852..265968,266053..266226,266323..>266454)	Acanthamoeba castellanii str. Neff	14922534
ACA1_229530	mRNA	ACA1_229530	NW_004457596.1	267118	271360	D	ACA1_229530	join(<267118..267654,267743..267862,268080..268199,268285..268359,268453..268629,268730..268874,268984..269073,269176..270606,270727..270900,270971..271093,271161..>271360)	Acanthamoeba castellanii str. Neff	14922535
ACA1_229540	mRNA	ACA1_229540	NW_004457596.1	271439	272491	R	ACA1_229540	complement(join(<271439..271561,271646..271858,271981..272079,272142..272366,272402..>272491))	Acanthamoeba castellanii str. Neff	14922536
ACA1_229550	mRNA	ACA1_229550	NW_004457596.1	272909	277275	D	ACA1_229550	join(<272909..272960,273104..273250,273357..273409,273521..273640,273751..273903,274066..274135,274226..276140,276324..276849,277129..>277275)	Acanthamoeba castellanii str. Neff	14922537
ACA1_229560	mRNA	ACA1_229560	NW_004457596.1	277915	279323	R	ACA1_229560	complement(join(<277915..278030,278064..278121,278216..278323,278468..278546,278636..278730,278842..279027,279108..>279323))	Acanthamoeba castellanii str. Neff	14922538
ACA1_229570	mRNA	ACA1_229570	NW_004457596.1	279707	281295	R	ACA1_229570	complement(join(<279707..279868,279989..280061,280130..280212,280298..280357,280451..280569,280673..280817,280886..280946,281031..281105,281198..>281295))	Acanthamoeba castellanii str. Neff	14922539
ACA1_229580	mRNA	ACA1_229580	NW_004457596.1	281663	281993	R	ACA1_229580	complement(join(<281663..281837,281929..>281993))	Acanthamoeba castellanii str. Neff	14922540
ACA1_229610	mRNA	ACA1_229610	NW_004457596.1	292927	297585	R	ACA1_229610	complement(join(<292927..293133,293218..293312,293398..293507,293678..293873,293961..294081,294213..294344,294542..294686,294765..295041,295157..295248,295362..295566,295665..295763,295848..295929,295996..296084,296161..296284,296369..296500,296573..296703,296783..296986,297123..297240,297379..>297585))	Acanthamoeba castellanii str. Neff	14922543
ACA1_229620	mRNA	ACA1_229620	NW_004457596.1	300281	304030	R	ACA1_229620	complement(join(<300281..300296,300315..300491,300589..301106,301127..301330,301351..301569,301648..301716,301792..301959,302064..302250,302354..302423,302504..303754,303979..>304030))	Acanthamoeba castellanii str. Neff	14922544
ACA1_229730	mRNA	ACA1_229730	NW_004457596.1	305068	305635	R	ACA1_229730	complement(join(<305068..305190,305284..305487,305579..>305635))	Acanthamoeba castellanii str. Neff	14922545
ACA1_229940	mRNA	ACA1_229940	NW_004457596.1	309064	313417	D	ACA1_229940	join(<309064..309324,309414..309515,309624..309782,309871..310662,310789..310968,311055..311120,311189..311344,311447..311613,311718..311815,311925..312175,312305..312583,312680..312821,312873..313006,313128..313219,313303..>313417)	Acanthamoeba castellanii str. Neff	14922546
ACA1_229950	mRNA	ACA1_229950	NW_004457596.1	313773	314894	D	ACA1_229950	<313773..>314894	Acanthamoeba castellanii str. Neff	14922547
ACA1_229960	mRNA	ACA1_229960	NW_004457596.1	315232	316588	D	ACA1_229960	join(<315232..315414,315514..315612,315686..315760,315850..315996,316023..316288,316399..>316588)	Acanthamoeba castellanii str. Neff	14922548
ACA1_229970	mRNA	ACA1_229970	NW_004457596.1	317814	319424	D	ACA1_229970	join(<317814..317907,317982..318020,318088..318155,318404..318483,318557..318789,318815..318990,319080..319223,319359..>319424)	Acanthamoeba castellanii str. Neff	14922549
ACA1_230080	mRNA	ACA1_230080	NW_004457596.1	320471	323261	D	ACA1_230080	join(<320471..320564,320636..320674,320759..320807,321093..321153,321236..321484,321586..321886,321968..321993,322190..322657,322752..322883,323019..>323261)	Acanthamoeba castellanii str. Neff	14922550
ACA1_230190	mRNA	ACA1_230190	NW_004457596.1	323878	326427	D	ACA1_230190	join(<323878..323992,324121..324192,324291..324441,324637..325268,325332..325474,326199..326261,326350..>326427)	Acanthamoeba castellanii str. Neff	14922551
ACA1_230200	mRNA	ACA1_230200	NW_004457596.1	326604	327630	R	ACA1_230200	complement(join(<326604..326620,326717..326857,326949..327106,327134..327234,327370..>327630))	Acanthamoeba castellanii str. Neff	14922552
ACA1_230210	mRNA	ACA1_230210	NW_004457596.1	328002	329502	D	ACA1_230210	join(<328002..328229,328450..328524,328597..328752,328928..329029,329125..>329502)	Acanthamoeba castellanii str. Neff	14922553
ACA1_230220	mRNA	ACA1_230220	NW_004457596.1	329587	330010	R	ACA1_230220	complement(join(<329587..329742,329825..>330010))	Acanthamoeba castellanii str. Neff	14922554
ACA1_230230	mRNA	ACA1_230230	NW_004457596.1	331276	331703	D	ACA1_230230	join(<331276..331434,331500..>331703)	Acanthamoeba castellanii str. Neff	14922555
ACA1_230240	mRNA	ACA1_230240	NW_004457596.1	331832	333794	R	ACA1_230240	complement(join(<331832..331957,332065..332157,332223..333263,333351..333503,333744..>333794))	Acanthamoeba castellanii str. Neff	14922556
ACA1_230250	mRNA	ACA1_230250	NW_004457596.1	334086	335041	R	ACA1_230250	complement(join(<334086..334102,334185..334325,334415..334572,334600..334700,334850..>335041))	Acanthamoeba castellanii str. Neff	14922557
ACA1_230260	mRNA	ACA1_230260	NW_004457596.1	335217	336834	D	ACA1_230260	join(<335217..335236,335307..335337,335453..335701,335808..335882,335964..336119,336259..336360,336460..>336834)	Acanthamoeba castellanii str. Neff	14922558
ACA1_230270	mRNA	ACA1_230270	NW_004457596.1	336928	337413	R	ACA1_230270	complement(join(<336928..337098,337177..337338,337378..>337413))	Acanthamoeba castellanii str. Neff	14922559
ACA1_230280	mRNA	ACA1_230280	NW_004457596.1	337964	338807	D	ACA1_230280	join(<337964..338000,338106..338197,338367..338440,338526..338633,338732..>338807)	Acanthamoeba castellanii str. Neff	14922560
ACA1_230290	mRNA	ACA1_230290	NW_004457596.1	338929	339367	D	ACA1_230290	join(<338929..339087,339164..>339367)	Acanthamoeba castellanii str. Neff	14922561
ACA1_230300	mRNA	ACA1_230300	NW_004457596.1	339899	341417	D	ACA1_230300	join(<339899..339916,340041..340175,340273..340375,340745..340958,341062..341126,341284..>341417)	Acanthamoeba castellanii str. Neff	14922562
ACA1_230310	mRNA	ACA1_230310	NW_004457596.1	342515	344147	D	ACA1_230310	join(<342515..342605,342688..342958,343056..343197,343295..343386,343488..343602,343746..>344147)	Acanthamoeba castellanii str. Neff	14922563
ACA1_230320	mRNA	ACA1_230320	NW_004457596.1	344267	344760	R	ACA1_230320	complement(join(<344267..344388,344479..344622,344706..>344760))	Acanthamoeba castellanii str. Neff	14922564
ACA1_230430	mRNA	ACA1_230430	NW_004457596.1	346516	348068	R	ACA1_230430	complement(join(<346516..346642,347115..347185,347276..347364,347440..347547,347622..347673,347755..347837,347909..>348068))	Acanthamoeba castellanii str. Neff	14922565
ACA1_230440	mRNA	ACA1_230440	NW_004457596.1	348370	350803	D	ACA1_230440	join(<348370..348462,348570..348679,348786..348838,348907..349024,349126..349253,349328..349473,349565..349730,349808..350039,350072..350282,350358..350483,350558..>350803)	Acanthamoeba castellanii str. Neff	14922566
ACA1_230450	mRNA	ACA1_230450	NW_004457596.1	350917	351885	R	ACA1_230450	complement(join(<350917..351186,351232..>351885))	Acanthamoeba castellanii str. Neff	14922567
ACA1_230460	mRNA	ACA1_230460	NW_004457596.1	354068	354785	R	ACA1_230460	complement(join(<354068..354502,354576..>354785))	Acanthamoeba castellanii str. Neff	14922568
ACA1_230470	mRNA	ACA1_230470	NW_004457596.1	355536	357244	D	ACA1_230470	join(<355536..355598,355673..355828,355891..356093,356173..356415,356494..356650,356729..356960,357049..357173,357221..>357244)	Acanthamoeba castellanii str. Neff	14922569
ACA1_230490	mRNA	ACA1_230490	NW_004457596.1	358899	362410	D	ACA1_230490	join(<358899..359071,359372..359460,359581..359706,359960..360356,360444..360583,360671..360797,360900..361025,361120..361242,361319..361740,361853..361963,362082..>362410)	Acanthamoeba castellanii str. Neff	14922571
ACA1_230500	mRNA	ACA1_230500	NW_004457596.1	362690	365618	D	ACA1_230500	join(<362690..363047,363175..363236,363337..363405,363544..363615,363692..363815,363886..363978,364098..364162,364291..364382,364466..364600,364736..364851,364959..365078,365145..365215,365327..365439,365522..>365618)	Acanthamoeba castellanii str. Neff	14922572
ACA1_230510	mRNA	ACA1_230510	NW_004457596.1	367135	370051	R	ACA1_230510	complement(join(<367135..367350,367434..367743,367835..367949,368021..368092,368153..368278,368345..368478,368554..368604,368884..369005,369095..369220,369308..369567,369658..369812,369936..>370051))	Acanthamoeba castellanii str. Neff	14922573
ACA1_230520	mRNA	ACA1_230520	NW_004457596.1	370436	371944	R	ACA1_230520	complement(join(<370436..370705,370717..370842,370925..371059,371163..371251,371346..371518,371592..371650,371716..371874,371939..>371944))	Acanthamoeba castellanii str. Neff	14922574
ACA1_230530	mRNA	ACA1_230530	NW_004457596.1	372109	373709	D	ACA1_230530	join(<372109..372175,372255..372440,372535..372813,372885..372976,373054..373234,373309..373502,373587..>373709)	Acanthamoeba castellanii str. Neff	14922575
ACA1_230540	mRNA	ACA1_230540	NW_004457596.1	374338	375247	D	ACA1_230540	join(<374338..374608,374682..374692,374705..>375247)	Acanthamoeba castellanii str. Neff	14922576
ACA1_230550	mRNA	ACA1_230550	NW_004457596.1	376223	376765	R	ACA1_230550	complement(join(<376223..376361,376437..>376765))	Acanthamoeba castellanii str. Neff	14922577
ACA1_230570	mRNA	ACA1_230570	NW_004457596.1	378967	382076	R	ACA1_230570	complement(join(<378967..379087,379159..379321,379411..379563,379649..379766,379882..379992,380101..380193,380331..380409,380586..380667,380764..380831,381022..381092,381164..381256,381344..381401,381493..381766,381875..>382076))	Acanthamoeba castellanii str. Neff	14922579
ACA1_230580	mRNA	ACA1_230580	NW_004457596.1	382244	385070	R	ACA1_230580	complement(join(<382244..382347,382592..382763,382886..383042,383205..383280,383365..383525,383598..383698,383769..383861,383979..384090,384187..384258,384772..384871,384977..>385070))	Acanthamoeba castellanii str. Neff	14922580
ACA1_230790	mRNA	ACA1_230790	NW_004457596.1	385242	386485	D	ACA1_230790	join(<385242..386347,386380..>386485)	Acanthamoeba castellanii str. Neff	14922581
ACA1_230800	mRNA	ACA1_230800	NW_004457596.1	387147	389103	D	ACA1_230800	join(<387147..387346,387531..387734,387835..388068,388426..388702,388862..388879,388957..>389103)	Acanthamoeba castellanii str. Neff	14922582
ACA1_231010	mRNA	ACA1_231010	NW_004457596.1	389788	391128	D	ACA1_231010	join(<389788..389885,389972..390588,390653..>391128)	Acanthamoeba castellanii str. Neff	14922583
ACA1_231120	mRNA	ACA1_231120	NW_004457596.1	393521	394874	D	ACA1_231120	join(<393521..393674,393741..394022,394055..394401,394649..394753,394821..>394874)	Acanthamoeba castellanii str. Neff	14922584
ACA1_231130	mRNA	ACA1_231130	NW_004457596.1	402155	402712	D	ACA1_231130	join(<402155..402247,402536..>402712)	Acanthamoeba castellanii str. Neff	14922585
ACA1_231140	mRNA	ACA1_231140	NW_004457596.1	407993	408513	R	ACA1_231140	complement(join(<407993..408273,408396..>408513))	Acanthamoeba castellanii str. Neff	14922586
ACA1_231150	mRNA	ACA1_231150	NW_004457596.1	409316	410127	R	ACA1_231150	complement(join(<409316..409398,409930..410023,410092..>410127))	Acanthamoeba castellanii str. Neff	14922587
ACA1_231260	mRNA	ACA1_231260	NW_004457596.1	413852	415728	D	ACA1_231260	join(<413852..413956,414109..414198,414373..414510,414614..414833,414967..415035,415370..>415728)	Acanthamoeba castellanii str. Neff	14922588
ACA1_231270	mRNA	ACA1_231270	NW_004457596.1	416763	417070	D	ACA1_231270	join(<416763..416847,416967..>417070)	Acanthamoeba castellanii str. Neff	14922589
ACA1_231280	mRNA	ACA1_231280	NW_004457596.1	417098	417379	D	ACA1_231280	<417098..>417379	Acanthamoeba castellanii str. Neff	14922590
ACA1_231390	mRNA	ACA1_231390	NW_004457596.1	418336	418584	R	ACA1_231390	complement(join(<418336..418399,418466..>418584))	Acanthamoeba castellanii str. Neff	14922591
ACA1_231400	mRNA	ACA1_231400	NW_004457596.1	421944	422781	R	ACA1_231400	complement(join(<421944..421989,422089..422204,422761..>422781))	Acanthamoeba castellanii str. Neff	14922592
ACA1_231410	mRNA	ACA1_231410	NW_004457596.1	425970	426893	D	ACA1_231410	join(<425970..426068,426126..426281,426630..426678,426859..>426893)	Acanthamoeba castellanii str. Neff	14922593
ACA1_231420	mRNA	ACA1_231420	NW_004457596.1	427313	427654	R	ACA1_231420	complement(join(<427313..427475,427593..>427654))	Acanthamoeba castellanii str. Neff	14922594
ACA1_231430	mRNA	ACA1_231430	NW_004457596.1	428667	430716	D	ACA1_231430	join(<428667..429215,429486..429719,430047..430255,430521..>430716)	Acanthamoeba castellanii str. Neff	14922595
ACA1_231440	mRNA	ACA1_231440	NW_004457596.1	437531	437975	R	ACA1_231440	complement(join(<437531..437903,437956..>437975))	Acanthamoeba castellanii str. Neff	14922596
ACA1_231550	mRNA	ACA1_231550	NW_004457596.1	438323	439406	D	ACA1_231550	join(<438323..438342,438739..439027,439161..439178,439260..>439406)	Acanthamoeba castellanii str. Neff	14922597
ACA1_231560	mRNA	ACA1_231560	NW_004457596.1	439817	440644	D	ACA1_231560	join(<439817..439822,440054..440122,440189..440374,440439..440507,440594..>440644)	Acanthamoeba castellanii str. Neff	14922598
ACA1_231570	mRNA	ACA1_231570	NW_004457596.1	441619	443026	D	ACA1_231570	join(<441619..441655,441838..442544,442612..442716,442813..442917,442973..>443026)	Acanthamoeba castellanii str. Neff	14922599
ACA1_231580	mRNA	ACA1_231580	NW_004457596.1	443496	443978	R	ACA1_231580	complement(<443496..>443978)	Acanthamoeba castellanii str. Neff	14922600
ACA1_231690	mRNA	ACA1_231690	NW_004457596.1	444954	445366	R	ACA1_231690	complement(join(<444954..445154,445229..>445366))	Acanthamoeba castellanii str. Neff	14922601
ACA1_231800	mRNA	ACA1_231800	NW_004457596.1	446450	446916	R	ACA1_231800	complement(join(<446450..446459,446561..>446916))	Acanthamoeba castellanii str. Neff	14922602
ACA1_231810	mRNA	ACA1_231810	NW_004457596.1	447077	447722	D	ACA1_231810	join(<447077..447239,447366..447468,447542..>447722)	Acanthamoeba castellanii str. Neff	14922603
ACA1_231820	mRNA	ACA1_231820	NW_004457596.1	448610	449718	D	ACA1_231820	join(<448610..448668,449216..449338,449688..>449718)	Acanthamoeba castellanii str. Neff	14922604
ACA1_231930	mRNA	ACA1_231930	NW_004457596.1	452909	454305	R	ACA1_231930	complement(join(<452909..453162,453242..453357,453484..453599,453707..453851,453933..454065,454221..>454305))	Acanthamoeba castellanii str. Neff	14922605
ACA1_079560	mRNA	ACA1_079560	NW_004457595.1	15	1154	R	ACA1_079560	complement(join(<15..452,522..628,699..852,1080..>1154))	Acanthamoeba castellanii str. Neff	14922416
ACA1_079570	mRNA	ACA1_079570	NW_004457595.1	1555	1832	R	ACA1_079570	complement(join(<1555..1644,1671..>1832))	Acanthamoeba castellanii str. Neff	14922417
ACA1_079580	mRNA	ACA1_079580	NW_004457595.1	2683	3504	R	ACA1_079580	complement(join(<2683..2907,2962..3030,3061..3173,3323..3333,3380..>3504))	Acanthamoeba castellanii str. Neff	14922418
ACA1_079690	mRNA	ACA1_079690	NW_004457595.1	9772	11556	R	ACA1_079690	complement(join(<9772..10394,10460..10564,10640..10781,11037..11226,11237..>11556))	Acanthamoeba castellanii str. Neff	14922409
ACA1_079700	mRNA	ACA1_079700	NW_004457595.1	12524	13285	D	ACA1_079700	join(<12524..12778,13076..>13285)	Acanthamoeba castellanii str. Neff	14922410
ACA1_079710	mRNA	ACA1_079710	NW_004457595.1	13909	14171	D	ACA1_079710	<13909..>14171	Acanthamoeba castellanii str. Neff	14922411
ACA1_079720	mRNA	ACA1_079720	NW_004457595.1	15109	17045	D	ACA1_079720	join(<15109..15255,15280..15690,15714..16041,16428..16747,16971..>17045)	Acanthamoeba castellanii str. Neff	14922412
ACA1_079730	mRNA	ACA1_079730	NW_004457595.1	17232	17706	R	ACA1_079730	complement(join(<17232..17486,17569..>17706))	Acanthamoeba castellanii str. Neff	14922413
ACA1_079740	mRNA	ACA1_079740	NW_004457595.1	20200	20373	D	ACA1_079740	<20200..>20373	Acanthamoeba castellanii str. Neff	14922414
ACA1_079950	mRNA	ACA1_079950	NW_004457595.1	27736	28053	D	ACA1_079950	join(<27736..27754,27881..>28053)	Acanthamoeba castellanii str. Neff	14922415
ACA1_327900	mRNA	ACA1_327900	NW_004457594.1	74	1658	D	ACA1_327900	join(<74..461,583..732,793..921,1002..1151,1265..1323,1443..>1658)	Acanthamoeba castellanii str. Neff	14922408
ACA1_327910	mRNA	ACA1_327910	NW_004457594.1	1779	2080	R	ACA1_327910	complement(join(<1779..1910,2009..>2080))	Acanthamoeba castellanii str. Neff	14922399
ACA1_327920	mRNA	ACA1_327920	NW_004457594.1	3499	9005	R	ACA1_327920	complement(join(<3499..3587,3689..3850,3943..4066,4146..4234,4304..4379,4479..4739,4874..4979,5037..5197,5291..5386,5484..5549,5653..5721,5802..5906,6020..6157,6274..6331,6425..6527,6640..6822,6925..7054,7172..7298,7392..7525,7608..7736,7836..7920,8029..8152,8240..8300,8427..8597,8751..8827,8933..>9005))	Acanthamoeba castellanii str. Neff	14922404
ACA1_327930	mRNA	ACA1_327930	NW_004457594.1	9532	10208	D	ACA1_327930	join(<9532..9822,9916..10052,10115..>10208)	Acanthamoeba castellanii str. Neff	14922405
ACA1_327940	mRNA	ACA1_327940	NW_004457594.1	10322	10657	R	ACA1_327940	complement(join(<10322..10488,10576..>10657))	Acanthamoeba castellanii str. Neff	14922406
ACA1_327950	mRNA	ACA1_327950	NW_004457594.1	10803	11121	D	ACA1_327950	join(<10803..11026,11094..>11121)	Acanthamoeba castellanii str. Neff	14922407
ACA1_328060	mRNA	ACA1_328060	NW_004457594.1	12444	13996	R	ACA1_328060	complement(join(<12444..12545,12618..12756,12828..12964,13029..13095,13178..13266,13338..13430,13498..13592,13678..>13996))	Acanthamoeba castellanii str. Neff	14922402
ACA1_328070	mRNA	ACA1_328070	NW_004457594.1	14111	14764	R	ACA1_328070	complement(<14111..>14764)	Acanthamoeba castellanii str. Neff	14922403
ACA1_328080	mRNA	ACA1_328080	NW_004457594.1	15040	16287	R	ACA1_328080	complement(join(<15040..15129,15209..15264,15331..15448,15538..15609,15693..15777,15861..15894,15970..16158,16245..>16287))	Acanthamoeba castellanii str. Neff	14922400
ACA1_328090	mRNA	ACA1_328090	NW_004457594.1	16568	18073	D	ACA1_328090	join(<16568..16690,16766..17247,17329..17449,17513..17663,17730..17848,17918..>18073)	Acanthamoeba castellanii str. Neff	14922401
ACA1_181380	mRNA	ACA1_181380	NW_004457592.1	822	1194	D	ACA1_181380	join(<822..905,973..>1194)	Acanthamoeba castellanii str. Neff	14922398
ACA1_181390	mRNA	ACA1_181390	NW_004457592.1	1639	1987	D	ACA1_181390	join(<1639..1767,1928..>1987)	Acanthamoeba castellanii str. Neff	14922147
ACA1_181400	mRNA	ACA1_181400	NW_004457592.1	2038	3676	R	ACA1_181400	complement(join(<2038..2151,2232..2316,2419..2859,2939..3026,3168..3237,3332..3529,3611..>3676))	Acanthamoeba castellanii str. Neff	14922148
ACA1_181510	mRNA	ACA1_181510	NW_004457592.1	6123	6473	R	ACA1_181510	complement(join(<6123..6166,6198..6271,6356..>6473))	Acanthamoeba castellanii str. Neff	14922170
ACA1_181520	mRNA	ACA1_181520	NW_004457592.1	6755	7866	D	ACA1_181520	join(<6755..7207,7321..>7866)	Acanthamoeba castellanii str. Neff	14922171
ACA1_181530	mRNA	ACA1_181530	NW_004457592.1	8066	8681	R	ACA1_181530	complement(join(<8066..8145,8242..8306,8423..8519,8630..>8681))	Acanthamoeba castellanii str. Neff	14922172
ACA1_181540	mRNA	ACA1_181540	NW_004457592.1	9016	10234	D	ACA1_181540	join(<9016..9159,9256..9354,9457..9528,9689..9764,9837..9949,10043..>10234)	Acanthamoeba castellanii str. Neff	14922173
ACA1_181550	mRNA	ACA1_181550	NW_004457592.1	12126	14256	D	ACA1_181550	join(<12126..12458,12557..13739,13810..13868,13936..14047,14195..>14256)	Acanthamoeba castellanii str. Neff	14922174
ACA1_181560	mRNA	ACA1_181560	NW_004457592.1	14343	17493	D	ACA1_181560	join(<14343..14391,14537..14705,14781..14871,14970..15293,15493..17197,17300..>17493)	Acanthamoeba castellanii str. Neff	14922175
ACA1_181570	mRNA	ACA1_181570	NW_004457592.1	17937	18983	D	ACA1_181570	join(<17937..18611,18681..>18983)	Acanthamoeba castellanii str. Neff	14922176
ACA1_181580	mRNA	ACA1_181580	NW_004457592.1	19334	20902	R	ACA1_181580	complement(join(<19334..19441,19501..19566,19647..19721,19808..19931,20001..20109,20180..20462,20583..20693,20777..>20902))	Acanthamoeba castellanii str. Neff	14922177
ACA1_181590	mRNA	ACA1_181590	NW_004457592.1	21025	25195	D	ACA1_181590	join(<21025..21138,21263..21355,21437..21475,21549..21634,21713..21778,21854..21950,22029..22176,22258..22407,22724..22859,22934..23049,23117..23328,23432..23529,23639..23881,23960..24029,24119..24175,24271..24418,24515..24711,24864..24971,25049..>25195)	Acanthamoeba castellanii str. Neff	14922178
ACA1_181600	mRNA	ACA1_181600	NW_004457592.1	25259	25673	D	ACA1_181600	join(<25259..25457,25525..>25673)	Acanthamoeba castellanii str. Neff	14922179
ACA1_181610	mRNA	ACA1_181610	NW_004457592.1	25899	27705	R	ACA1_181610	complement(join(<25899..25943,26087..26221,26349..26452,26567..26665,26778..26866,26944..27046,27203..27401,27544..>27705))	Acanthamoeba castellanii str. Neff	14922180
ACA1_181620	mRNA	ACA1_181620	NW_004457592.1	28086	29353	D	ACA1_181620	join(<28086..28206,28540..28784,28866..28935,28959..29010,29050..>29353)	Acanthamoeba castellanii str. Neff	14922181
ACA1_181630	mRNA	ACA1_181630	NW_004457592.1	29609	31569	D	ACA1_181630	join(<29609..29643,29725..29811,29932..30150,30237..30306,30423..30506,30596..30719,30777..30880,30993..31077,31157..31240,31331..>31569)	Acanthamoeba castellanii str. Neff	14922182
ACA1_181640	mRNA	ACA1_181640	NW_004457592.1	31666	34081	D	ACA1_181640	join(<31666..31798,31890..32040,32148..32258,32346..32468,32593..32662,32748..32962,33045..33178,33272..33391,33484..33557,33633..33695,33788..>34081)	Acanthamoeba castellanii str. Neff	14922149
ACA1_181650	mRNA	ACA1_181650	NW_004457592.1	34164	34693	D	ACA1_181650	join(<34164..34245,34345..34446,34512..34583,34683..>34693)	Acanthamoeba castellanii str. Neff	14922150
ACA1_181660	mRNA	ACA1_181660	NW_004457592.1	34763	36109	D	ACA1_181660	join(<34763..34811,35002..35066,35131..35224,35300..35385,35455..35543,35634..35714,35789..35881,35947..35986,36059..>36109)	Acanthamoeba castellanii str. Neff	14922151
ACA1_181670	mRNA	ACA1_181670	NW_004457592.1	36423	37828	D	ACA1_181670	join(<36423..36533,36632..36701,36835..36922,37002..37457,37550..37634,37715..>37828)	Acanthamoeba castellanii str. Neff	14922152
ACA1_181680	mRNA	ACA1_181680	NW_004457592.1	38692	39249	R	ACA1_181680	complement(join(<38692..38731,38811..39017,39164..>39249))	Acanthamoeba castellanii str. Neff	14922153
ACA1_181690	mRNA	ACA1_181690	NW_004457592.1	39569	41634	R	ACA1_181690	complement(join(<39569..40387,40408..>41634))	Acanthamoeba castellanii str. Neff	14922154
ACA1_181700	mRNA	ACA1_181700	NW_004457592.1	46500	46829	D	ACA1_181700	join(<46500..46540,46652..>46829)	Acanthamoeba castellanii str. Neff	14922155
ACA1_181710	mRNA	ACA1_181710	NW_004457592.1	47201	47482	R	ACA1_181710	complement(<47201..>47482)	Acanthamoeba castellanii str. Neff	14922156
ACA1_181830	mRNA	ACA1_181830	NW_004457592.1	51496	56168	R	ACA1_181830	complement(join(<51496..51553,51736..51816,51928..52451,52565..52678,52779..52844,52966..53133,53254..53503,53578..53716,53800..54159,54246..54986,55135..56017,56148..>56168))	Acanthamoeba castellanii str. Neff	14922158
ACA1_181840	mRNA	ACA1_181840	NW_004457592.1	56776	58252	R	ACA1_181840	complement(join(<56776..56793,56935..57126,57218..57364,57445..57545,57883..>58252))	Acanthamoeba castellanii str. Neff	14922159
ACA1_181850	mRNA	ACA1_181850	NW_004457592.1	59363	60304	D	ACA1_181850	<59363..>60304	Acanthamoeba castellanii str. Neff	14922160
ACA1_181860	mRNA	ACA1_181860	NW_004457592.1	60405	61523	R	ACA1_181860	complement(join(<60405..60617,60661..60696,60998..61255,61503..>61523))	Acanthamoeba castellanii str. Neff	14922161
ACA1_181870	mRNA	ACA1_181870	NW_004457592.1	61828	64118	D	ACA1_181870	join(<61828..62074,62205..62377,62436..62778,62881..63016,63125..63238,63412..63564,63719..63834,63973..>64118)	Acanthamoeba castellanii str. Neff	14922162
ACA1_181890	mRNA	ACA1_181890	NW_004457592.1	66339	69034	R	ACA1_181890	complement(join(<66339..66483,66560..66732,66815..66867,66940..67050,67176..67304,67563..67670,67868..68076,68138..68274,68531..68604,68674..68803,68864..>69034))	Acanthamoeba castellanii str. Neff	14922164
ACA1_181900	mRNA	ACA1_181900	NW_004457592.1	69149	69764	R	ACA1_181900	complement(join(<69149..69270,69341..69439,69514..69685,69756..>69764))	Acanthamoeba castellanii str. Neff	14922165
ACA1_181910	mRNA	ACA1_181910	NW_004457592.1	69988	72337	R	ACA1_181910	complement(join(<69988..70018,70109..70221,70305..70401,70476..70597,70667..70709,70790..70883,70977..71070,71134..71229,71290..71362,71423..71534,71613..71730,71817..71929,72003..72043,72123..>72337))	Acanthamoeba castellanii str. Neff	14922166
ACA1_181920	mRNA	ACA1_181920	NW_004457592.1	72632	72844	R	ACA1_181920	complement(<72632..>72844)	Acanthamoeba castellanii str. Neff	14922167
ACA1_181930	mRNA	ACA1_181930	NW_004457592.1	73523	80665	D	ACA1_181930	join(<73523..73531,73564..73915,74000..74065,74157..74275,74358..74453,74537..74614,74685..74805,74871..74911,75000..75077,75161..75274,75360..75434,75591..75622,75708..75819,75894..76039,76100..76254,76334..76451,76521..76722,76788..76971,77045..77237,77324..77370,77485..77542,77615..78368,78480..78601,78664..78706,78803..78978,79071..79200,79277..79465,79634..79703,79802..79878,79981..80124,80222..80485,80591..>80665)	Acanthamoeba castellanii str. Neff	14922168
ACA1_181940	mRNA	ACA1_181940	NW_004457592.1	81206	89223	D	ACA1_181940	join(<81206..81775,81857..82711,82866..82970,83061..83204,83332..83512,83582..83748,83843..83965,84192..84358,84510..84611,84729..84903,85010..85107,85227..85329,85413..85691,85809..85910,86012..86495,86577..86694,86796..86973,87188..87295,87418..87591,87704..87906,88032..88155,88276..88387,88485..88604,88745..88962,89035..>89223)	Acanthamoeba castellanii str. Neff	14922169
ACA1_181950	mRNA	ACA1_181950	NW_004457592.1	89759	90642	D	ACA1_181950	join(<89759..89862,89947..90148,90260..90330,90429..>90642)	Acanthamoeba castellanii str. Neff	14922183
ACA1_181960	mRNA	ACA1_181960	NW_004457592.1	90802	92660	D	ACA1_181960	join(<90802..90943,91009..91173,91260..91373,91551..91645,91764..91853,92009..92143,92211..92418,92551..>92660)	Acanthamoeba castellanii str. Neff	14922184
ACA1_181970	mRNA	ACA1_181970	NW_004457592.1	93628	94353	R	ACA1_181970	complement(join(<93628..94131,94351..>94353))	Acanthamoeba castellanii str. Neff	14922185
ACA1_181980	mRNA	ACA1_181980	NW_004457592.1	94866	97728	D	ACA1_181980	join(<94866..95032,95173..95255,95343..95464,95540..95647,95738..95920,95988..96129,96195..96268,96373..96456,96566..96643,96741..96831,96928..97002,97090..97253,97385..97551,97635..>97728)	Acanthamoeba castellanii str. Neff	14922186
ACA1_181990	mRNA	ACA1_181990	NW_004457592.1	97827	98701	D	ACA1_181990	join(<97827..97949,98036..98102,98209..98505,98622..>98701)	Acanthamoeba castellanii str. Neff	14922187
ACA1_182000	mRNA	ACA1_182000	NW_004457592.1	98841	101514	D	ACA1_182000	join(<98841..99126,99210..99323,99421..99508,99613..99730,99844..99917,100170..100352,100513..100603,100685..100787,100875..100991,101093..>101514)	Acanthamoeba castellanii str. Neff	14922188
ACA1_182010	mRNA	ACA1_182010	NW_004457592.1	101671	103226	R	ACA1_182010	complement(join(<101671..102327,102494..102547,102615..102911,102990..>103226))	Acanthamoeba castellanii str. Neff	14922189
ACA1_182020	mRNA	ACA1_182020	NW_004457592.1	104358	105165	D	ACA1_182020	join(<104358..104562,104690..>105165)	Acanthamoeba castellanii str. Neff	14922190
ACA1_182030	mRNA	ACA1_182030	NW_004457592.1	105510	111171	R	ACA1_182030	complement(join(<105510..105803,105927..106095,106208..106336,106459..106783,106851..107076,107164..107798,107911..108064,108185..108407,108558..108684,108767..108893,108997..109124,109227..109349,109460..109599,109711..109906,110037..110165,110281..110368,110542..110655,110842..>111171))	Acanthamoeba castellanii str. Neff	14922191
ACA1_182040	mRNA	ACA1_182040	NW_004457592.1	111283	116187	R	ACA1_182040	complement(join(<111283..111555,111656..111892,112035..112233,112335..112559,112669..112853,112948..113049,113176..113517,113593..113759,113873..114030,114121..114195,114264..114391,114577..114684,114817..114908,115038..115255,115375..115544,115628..115746,115853..115988,116062..>116187))	Acanthamoeba castellanii str. Neff	14922192
ACA1_182050	mRNA	ACA1_182050	NW_004457592.1	116313	116498	R	ACA1_182050	complement(<116313..>116498)	Acanthamoeba castellanii str. Neff	14922193
ACA1_182060	mRNA	ACA1_182060	NW_004457592.1	116801	117832	D	ACA1_182060	<116801..>117832	Acanthamoeba castellanii str. Neff	14922194
ACA1_182070	mRNA	ACA1_182070	NW_004457592.1	117910	118657	R	ACA1_182070	complement(join(<117910..117974,118092..118263,118338..118376,118436..118480,118637..>118657))	Acanthamoeba castellanii str. Neff	14922195
ACA1_182080	mRNA	ACA1_182080	NW_004457592.1	119323	123087	R	ACA1_182080	complement(join(<119323..119740,119834..120004,120082..120245,120348..120572,120650..120729,120827..121975,122130..>123087))	Acanthamoeba castellanii str. Neff	14922196
ACA1_182090	mRNA	ACA1_182090	NW_004457592.1	123476	126167	R	ACA1_182090	complement(join(<123476..123911,123981..124698,124796..124895,125014..125115,125146..125263,125394..125483,125582..125735,125855..>126167))	Acanthamoeba castellanii str. Neff	14922197
ACA1_182100	mRNA	ACA1_182100	NW_004457592.1	126644	127467	D	ACA1_182100	join(<126644..126818,126905..126992,127079..127118,127225..>127467)	Acanthamoeba castellanii str. Neff	14922198
ACA1_182110	mRNA	ACA1_182110	NW_004457592.1	127767	130272	D	ACA1_182110	join(<127767..128043,128160..128244,128343..128441,128585..128825,128991..129449,129592..129687,129712..129767,129851..130036,130116..>130272)	Acanthamoeba castellanii str. Neff	14922199
ACA1_182120	mRNA	ACA1_182120	NW_004457592.1	131273	133814	D	ACA1_182120	join(<131273..131412,131474..131700,131796..131845,131970..132080,132210..132340,132407..132565,132680..132885,132978..133133,133198..133276,133366..133465,133568..133681,133779..>133814)	Acanthamoeba castellanii str. Neff	14922200
ACA1_182130	mRNA	ACA1_182130	NW_004457592.1	133905	137871	R	ACA1_182130	complement(join(<133905..134015,134068..134243,134304..134436,134563..134759,134877..134994,135056..135228,135323..135440,135676..135776,136106..136202,136318..136432,136519..136604,136717..136816,136929..137537,137774..>137871))	Acanthamoeba castellanii str. Neff	14922201
ACA1_182140	mRNA	ACA1_182140	NW_004457592.1	139079	140257	D	ACA1_182140	join(<139079..139396,139503..139619,139743..139828,139942..140056,140150..>140257)	Acanthamoeba castellanii str. Neff	14922202
ACA1_182150	mRNA	ACA1_182150	NW_004457592.1	141174	142791	D	ACA1_182150	join(<141174..141640,141727..141835,141964..142049,142131..142242,142323..142513,142566..>142791)	Acanthamoeba castellanii str. Neff	14922203
ACA1_182160	mRNA	ACA1_182160	NW_004457592.1	143499	145444	D	ACA1_182160	join(<143499..143882,144015..144205,144292..144394,144521..144606,144718..144835,144920..>145444)	Acanthamoeba castellanii str. Neff	14922204
ACA1_182170	mRNA	ACA1_182170	NW_004457592.1	145601	147529	D	ACA1_182170	join(<145601..145695,146054..146491,146644..146743,146825..146907,147082..147160,147251..>147529)	Acanthamoeba castellanii str. Neff	14922205
ACA1_182180	mRNA	ACA1_182180	NW_004457592.1	147511	149249	R	ACA1_182180	complement(join(<147511..147523,147625..147777,147922..148215,148284..148363,148440..149061,149212..>149249))	Acanthamoeba castellanii str. Neff	14922206
ACA1_182190	mRNA	ACA1_182190	NW_004457592.1	149817	151113	R	ACA1_182190	complement(join(<149817..150095,150134..150193,150311..150428,150513..150598,150675..150783,150801..150814,150859..>151113))	Acanthamoeba castellanii str. Neff	14922207
ACA1_182200	mRNA	ACA1_182200	NW_004457592.1	154507	156336	D	ACA1_182200	join(<154507..154632,154754..154919,155018..155119,155204..155301,155441..155547,155666..155868,155945..156033,156163..>156336)	Acanthamoeba castellanii str. Neff	14922208
ACA1_182210	mRNA	ACA1_182210	NW_004457592.1	156987	158800	D	ACA1_182210	join(<156987..157038,157157..157178,157232..157618,157654..157765,157941..158134,158269..158371,158470..158555,158647..>158800)	Acanthamoeba castellanii str. Neff	14922209
ACA1_182230	mRNA	ACA1_182230	NW_004457592.1	160497	162693	R	ACA1_182230	complement(join(<160497..160694,160767..160842,160928..161004,161092..161306,161401..161478,161539..161617,161716..161802,161911..162018,162125..162160,162303..162347,162422..162547,162616..>162693))	Acanthamoeba castellanii str. Neff	14922211
ACA1_182240	mRNA	ACA1_182240	NW_004457592.1	163004	163527	D	ACA1_182240	join(<163004..163070,163159..163289,163372..>163527)	Acanthamoeba castellanii str. Neff	14922212
ACA1_182250	mRNA	ACA1_182250	NW_004457592.1	163626	164877	R	ACA1_182250	complement(join(<163626..163978,164146..164484,164583..164720,164799..>164877))	Acanthamoeba castellanii str. Neff	14922213
ACA1_182260	mRNA	ACA1_182260	NW_004457592.1	164965	167175	R	ACA1_182260	complement(join(<164965..165120,165207..165367,165455..165588,165719..165776,165847..166035,166134..166328,166429..166605,166673..166771,166872..>167175))	Acanthamoeba castellanii str. Neff	14922214
ACA1_182270	mRNA	ACA1_182270	NW_004457592.1	167542	167986	R	ACA1_182270	complement(join(<167542..167571,167795..>167986))	Acanthamoeba castellanii str. Neff	14922215
ACA1_182280	mRNA	ACA1_182280	NW_004457592.1	169917	172070	R	ACA1_182280	complement(join(<169917..169987,170062..170434,170488..170651,170845..171247,171361..171472,171588..171684,171788..>172070))	Acanthamoeba castellanii str. Neff	14922216
ACA1_182290	mRNA	ACA1_182290	NW_004457592.1	172495	173329	D	ACA1_182290	join(<172495..172551,172631..172743,172839..172989,173132..>173329)	Acanthamoeba castellanii str. Neff	14922217
ACA1_182300	mRNA	ACA1_182300	NW_004457592.1	173660	178902	D	ACA1_182300	join(<173660..173721,173808..173852,173993..174171,174262..174451,174572..174974,175046..176400,176486..176763,176838..177362,177454..177722,177798..178562,178702..>178902)	Acanthamoeba castellanii str. Neff	14922218
ACA1_182310	mRNA	ACA1_182310	NW_004457592.1	179021	181129	R	ACA1_182310	complement(join(<179021..179584,179664..179822,179905..180154,180305..180446,180521..180719,180810..180934,181012..>181129))	Acanthamoeba castellanii str. Neff	14922219
ACA1_182320	mRNA	ACA1_182320	NW_004457592.1	181328	184503	D	ACA1_182320	join(<181328..181384,181666..181906,181989..182129,182232..182482,182582..182803,182883..183039,183126..183321,183383..183489,184053..184152,184259..184337,184453..>184503)	Acanthamoeba castellanii str. Neff	14922220
ACA1_182330	mRNA	ACA1_182330	NW_004457592.1	184641	185922	D	ACA1_182330	join(<184641..184796,184884..184971,185109..185236,185331..185484,185606..185703,185866..>185922)	Acanthamoeba castellanii str. Neff	14922221
ACA1_182340	mRNA	ACA1_182340	NW_004457592.1	185987	188993	R	ACA1_182340	complement(join(<185987..186245,186357..186721,186833..186943,187087..187366,187513..187634,187742..187906,188023..188672,188804..>188993))	Acanthamoeba castellanii str. Neff	14922222
ACA1_182350	mRNA	ACA1_182350	NW_004457592.1	189331	195138	R	ACA1_182350	complement(join(<189331..191293,191476..191962,192044..192225,192335..192483,192593..192934,193073..193518,193642..193971,194086..194230,194368..194489,194657..194780,194986..>195138))	Acanthamoeba castellanii str. Neff	14922223
ACA1_182360	mRNA	ACA1_182360	NW_004457592.1	195834	197766	D	ACA1_182360	join(<195834..196722,196829..196936,197034..197268,197430..>197766)	Acanthamoeba castellanii str. Neff	14922224
ACA1_182370	mRNA	ACA1_182370	NW_004457592.1	198063	199096	R	ACA1_182370	complement(join(<198063..198115,198266..198380,198575..198693,198830..198973,199084..>199096))	Acanthamoeba castellanii str. Neff	14922225
ACA1_182380	mRNA	ACA1_182380	NW_004457592.1	199556	202651	D	ACA1_182380	join(<199556..200102,200206..200396,200546..200719,200880..201014,201097..201526,201728..201772,201884..201971,202113..202233,202347..202457,202532..>202651)	Acanthamoeba castellanii str. Neff	14922226
ACA1_182390	mRNA	ACA1_182390	NW_004457592.1	203225	203629	D	ACA1_182390	<203225..>203629	Acanthamoeba castellanii str. Neff	14922227
ACA1_182400	mRNA	ACA1_182400	NW_004457592.1	204081	205922	D	ACA1_182400	join(<204081..204184,204265..204326,204540..204671,204815..204872,204962..205013,205154..205223,205408..205613,205734..>205922)	Acanthamoeba castellanii str. Neff	14922228
ACA1_182410	mRNA	ACA1_182410	NW_004457592.1	206099	207427	R	ACA1_182410	complement(join(<206099..206131,206215..206336,206452..206584,206689..206777,206900..206986,207090..207195,207347..>207427))	Acanthamoeba castellanii str. Neff	14922229
ACA1_182530	mRNA	ACA1_182530	NW_004457592.1	210738	215232	D	ACA1_182530	join(<210738..210813,210893..210961,211131..211384,211559..211874,212031..212410,212512..213252,213349..213642,213838..214263,214419..214706,214828..215000,215130..>215232)	Acanthamoeba castellanii str. Neff	14922231
ACA1_182540	mRNA	ACA1_182540	NW_004457592.1	215821	222134	D	ACA1_182540	join(<215821..215847,215859..215922,216080..216271,216431..216536,216687..216837,217017..217158,217325..217537,217700..217767,217927..218016,218208..218270,218374..218494,218627..218705,218902..218941,219029..219094,219357..219533,219669..219739,219827..219983,220130..220228,220358..220436,220553..220590,220824..220940,221205..221507,221638..221697,221862..>222134)	Acanthamoeba castellanii str. Neff	14922232
ACA1_182550	mRNA	ACA1_182550	NW_004457592.1	222871	228508	D	ACA1_182550	join(<222871..222948,223481..223802,224004..224114,224320..224405,224602..224762,224969..225093,225157..225303,225451..225547,225718..225831,225958..226018,226287..226390,226623..226750,226821..226846,226890..226970,227106..227363,227546..227629,227726..227828,227985..228127,228173..>228508)	Acanthamoeba castellanii str. Neff	14922233
ACA1_182660	mRNA	ACA1_182660	NW_004457592.1	228705	230364	D	ACA1_182660	join(<228705..228878,229002..229137,229251..229324,229577..229663,229844..229940,230016..230178,230343..>230364)	Acanthamoeba castellanii str. Neff	14922234
ACA1_182770	mRNA	ACA1_182770	NW_004457592.1	235909	237142	R	ACA1_182770	complement(join(<235909..236511,236594..236809,237068..>237142))	Acanthamoeba castellanii str. Neff	14922235
ACA1_182790	mRNA	ACA1_182790	NW_004457592.1	243088	248827	D	ACA1_182790	join(<243088..243177,243295..243496,243626..243660,243802..243886,244024..244192,244284..244356,244475..244544,244691..244785,244905..244977,245395..245459,245492..245633,245794..245846,246027..246144,246263..246323,246496..246624,246884..246995,247133..247238,247404..247476,247705..247825,247972..248011,248150..248228,248461..248614,248711..>248827)	Acanthamoeba castellanii str. Neff	14922237
ACA1_182800	mRNA	ACA1_182800	NW_004457592.1	248952	249939	R	ACA1_182800	complement(join(<248952..249099,249191..249513,249835..>249939))	Acanthamoeba castellanii str. Neff	14922238
ACA1_182810	mRNA	ACA1_182810	NW_004457592.1	250181	254195	D	ACA1_182810	join(<250181..250357,250555..250720,250864..250988,251176..251314,251910..252034,252216..252407,252758..252881,253015..253138,253267..253363,253555..253641,253849..253944,254019..254117,254139..>254195)	Acanthamoeba castellanii str. Neff	14922239
ACA1_182820	mRNA	ACA1_182820	NW_004457592.1	254204	255404	D	ACA1_182820	join(<254204..254338,254608..254762,254893..254989,255102..>255404)	Acanthamoeba castellanii str. Neff	14922240
ACA1_182830	mRNA	ACA1_182830	NW_004457592.1	255454	258023	R	ACA1_182830	complement(join(<255454..256243,256257..256309,256456..257407,257643..257723,257860..>258023))	Acanthamoeba castellanii str. Neff	14922241
ACA1_182840	mRNA	ACA1_182840	NW_004457592.1	260409	263558	R	ACA1_182840	complement(join(<260409..260625,260901..261001,261199..261323,261542..261631,261714..261907,262055..262209,262402..262519,262747..262855,263105..263240,263382..>263558))	Acanthamoeba castellanii str. Neff	14922242
ACA1_182850	mRNA	ACA1_182850	NW_004457592.1	264072	266343	R	ACA1_182850	complement(join(<264072..264129,264370..264559,264592..265147,265220..265849,265969..266083,266291..>266343))	Acanthamoeba castellanii str. Neff	14922243
ACA1_182860	mRNA	ACA1_182860	NW_004457592.1	266990	269282	R	ACA1_182860	complement(join(<266990..267307,267419..267641,267767..267911,267999..268271,268366..268512,268575..268926,269061..>269282))	Acanthamoeba castellanii str. Neff	14922244
ACA1_182870	mRNA	ACA1_182870	NW_004457592.1	269539	274093	D	ACA1_182870	join(<269539..269686,269842..270038,270164..270353,270479..270765,270915..270990,271129..271350,271454..271527,271632..271670,271743..271797,271923..272097,272234..272364,272527..272643,272777..272977,273124..273240,273363..>274093)	Acanthamoeba castellanii str. Neff	14922245
ACA1_182880	mRNA	ACA1_182880	NW_004457592.1	274266	283459	R	ACA1_182880	complement(join(<274266..274409,274567..274698,274809..274865,274989..275084,275252..275409,275544..275816,275894..276011,276108..276392,276506..276613,276747..276932,277134..277492,277609..277795,277910..278335,278454..278626,278751..278850,278972..279118,279223..279393,279489..279630,279751..280082,280196..280340,280448..281000,281124..281403,281533..281690,281780..281882,282008..282269,282358..282607,282872..282921,283009..283141,283294..>283459))	Acanthamoeba castellanii str. Neff	14922246
ACA1_182890	mRNA	ACA1_182890	NW_004457592.1	285253	287989	D	ACA1_182890	join(<285253..285759,285867..285929,286052..286135,286265..286347,286462..286607,286710..>287989)	Acanthamoeba castellanii str. Neff	14922247
ACA1_182900	mRNA	ACA1_182900	NW_004457592.1	288557	289264	R	ACA1_182900	complement(join(<288557..288603,288756..288967,289131..>289264))	Acanthamoeba castellanii str. Neff	14922248
ACA1_182910	mRNA	ACA1_182910	NW_004457592.1	289407	290455	D	ACA1_182910	join(<289407..289508,289613..289765,289975..290081,290230..>290455)	Acanthamoeba castellanii str. Neff	14922249
ACA1_182920	mRNA	ACA1_182920	NW_004457592.1	290646	291828	R	ACA1_182920	complement(join(<290646..290717,290802..290850,290974..291207,291325..291507,291713..>291828))	Acanthamoeba castellanii str. Neff	14922250
ACA1_182930	mRNA	ACA1_182930	NW_004457592.1	292305	292690	D	ACA1_182930	join(<292305..292401,292587..>292690)	Acanthamoeba castellanii str. Neff	14922251
ACA1_182940	mRNA	ACA1_182940	NW_004457592.1	292969	296063	D	ACA1_182940	join(<292969..293256,293516..293616,293688..293814,293880..294494,294598..294885,294978..295234,295348..295680,295757..295910,295989..>296063)	Acanthamoeba castellanii str. Neff	14922252
ACA1_182950	mRNA	ACA1_182950	NW_004457592.1	296402	298483	D	ACA1_182950	join(<296402..296533,296663..296687,296806..296918,297072..297158,297251..297480,297610..297622,297880..298014,298168..298278,298394..>298483)	Acanthamoeba castellanii str. Neff	14922253
ACA1_182960	mRNA	ACA1_182960	NW_004457592.1	299331	301724	R	ACA1_182960	complement(join(<299331..299518,299631..299821,299915..300038,300161..>301724))	Acanthamoeba castellanii str. Neff	14922254
ACA1_182970	mRNA	ACA1_182970	NW_004457592.1	302294	304668	R	ACA1_182970	complement(join(<302294..302629,302742..303282,303366..303592,303708..304094,304204..>304668))	Acanthamoeba castellanii str. Neff	14922255
ACA1_182980	mRNA	ACA1_182980	NW_004457592.1	304837	305930	R	ACA1_182980	complement(join(<304837..304980,305142..>305930))	Acanthamoeba castellanii str. Neff	14922256
ACA1_182990	mRNA	ACA1_182990	NW_004457592.1	306163	308338	R	ACA1_182990	complement(join(<306163..306429,306522..306671,306801..306895,306987..307072,307188..307489,307551..307664,307790..307935,308125..>308338))	Acanthamoeba castellanii str. Neff	14922257
ACA1_183000	mRNA	ACA1_183000	NW_004457592.1	308680	309736	D	ACA1_183000	join(<308680..308697,308826..308903,309022..309195,309438..309515,309620..>309736)	Acanthamoeba castellanii str. Neff	14922258
ACA1_183010	mRNA	ACA1_183010	NW_004457592.1	309757	311858	D	ACA1_183010	join(<309757..309867,309963..310040,310118..310184,310303..310388,310475..310635,310747..310857,310992..311129,311242..311394,311470..311582,311698..>311858)	Acanthamoeba castellanii str. Neff	14922259
ACA1_183020	mRNA	ACA1_183020	NW_004457592.1	314635	315714	R	ACA1_183020	complement(<314635..>315714)	Acanthamoeba castellanii str. Neff	14922260
ACA1_183030	mRNA	ACA1_183030	NW_004457592.1	316173	318352	R	ACA1_183030	complement(join(<316173..316340,316475..316591,316678..316806,316898..317912,318066..>318352))	Acanthamoeba castellanii str. Neff	14922261
ACA1_183040	mRNA	ACA1_183040	NW_004457592.1	318524	320874	D	ACA1_183040	join(<318524..318722,318925..319118,319212..320591,320677..>320874)	Acanthamoeba castellanii str. Neff	14922262
ACA1_183050	mRNA	ACA1_183050	NW_004457592.1	321732	326679	D	ACA1_183050	join(<321732..321757,321953..322167,322285..322473,322565..322720,322839..322991,323117..323266,323381..323545,323647..323933,324001..324314,324423..324541,324635..325468,325579..325655,325732..325843,325937..326317,326411..>326679)	Acanthamoeba castellanii str. Neff	14922263
ACA1_183060	mRNA	ACA1_183060	NW_004457592.1	327183	328747	R	ACA1_183060	complement(join(<327183..327333,327471..327827,327913..328029,328130..328446,328482..328503,328584..>328747))	Acanthamoeba castellanii str. Neff	14922264
ACA1_183070	mRNA	ACA1_183070	NW_004457592.1	329257	330684	R	ACA1_183070	complement(join(<329257..329388,329557..329670,329741..329828,329956..330044,330223..330228,330282..330309,330366..330460,330541..>330684))	Acanthamoeba castellanii str. Neff	14922265
ACA1_183080	mRNA	ACA1_183080	NW_004457592.1	330705	331401	R	ACA1_183080	complement(join(<330705..330883,330955..331009,331141..>331401))	Acanthamoeba castellanii str. Neff	14922266
ACA1_183090	mRNA	ACA1_183090	NW_004457592.1	331546	332827	D	ACA1_183090	join(<331546..331600,331850..331975,332097..>332827)	Acanthamoeba castellanii str. Neff	14922267
ACA1_183100	mRNA	ACA1_183100	NW_004457592.1	332922	334449	R	ACA1_183100	complement(join(<332922..333025,333149..333227,333384..333476,333681..333891,333980..334229,334392..>334449))	Acanthamoeba castellanii str. Neff	14922268
ACA1_183110	mRNA	ACA1_183110	NW_004457592.1	335413	336810	D	ACA1_183110	<335413..>336810	Acanthamoeba castellanii str. Neff	14922269
ACA1_183120	mRNA	ACA1_183120	NW_004457592.1	337051	338250	D	ACA1_183120	join(<337051..337214,337363..337465,337545..337650,337751..337884,338013..338111,338164..>338250)	Acanthamoeba castellanii str. Neff	14922270
ACA1_183130	mRNA	ACA1_183130	NW_004457592.1	338398	340452	R	ACA1_183130	complement(join(<338398..338433,338504..338654,338748..338850,338940..339027,339182..339310,339422..339518,339599..339666,339891..340024,340175..340253,340372..>340452))	Acanthamoeba castellanii str. Neff	14922271
ACA1_183140	mRNA	ACA1_183140	NW_004457592.1	340746	342174	R	ACA1_183140	complement(join(<340746..340877,341024..341159,341252..341319,341403..341488,341577..341646,341752..341810,341886..341945,342165..>342174))	Acanthamoeba castellanii str. Neff	14922272
ACA1_183150	mRNA	ACA1_183150	NW_004457592.1	342653	343579	D	ACA1_183150	<342653..>343579	Acanthamoeba castellanii str. Neff	14922273
ACA1_183160	mRNA	ACA1_183160	NW_004457592.1	344315	348686	D	ACA1_183160	join(<344315..344330,344576..344605,344640..344668,344760..344858,344987..345099,345194..345296,345391..345453,345685..345756,345852..345938,345986..346022,346293..346502,346671..346760,346859..346985,347081..347235,347370..347550,347648..347735,347799..347972,348070..348245,348330..348428,348503..>348686)	Acanthamoeba castellanii str. Neff	14922274
ACA1_183170	mRNA	ACA1_183170	NW_004457592.1	349082	351213	D	ACA1_183170	join(<349082..349381,349497..349652,349730..349969,350068..350245,350311..350453,350531..350605,350704..350947,351041..>351213)	Acanthamoeba castellanii str. Neff	14922275
ACA1_183180	mRNA	ACA1_183180	NW_004457592.1	351658	352134	D	ACA1_183180	join(<351658..351684,351802..>352134)	Acanthamoeba castellanii str. Neff	14922276
ACA1_183190	mRNA	ACA1_183190	NW_004457592.1	352171	354433	R	ACA1_183190	complement(join(<352171..352258,352340..352477,352681..352781,352888..353003,353122..353226,353342..353483,353817..353988,354094..354178,354298..>354433))	Acanthamoeba castellanii str. Neff	14922277
ACA1_183200	mRNA	ACA1_183200	NW_004457592.1	355737	356848	D	ACA1_183200	join(<355737..356149,356217..356544,356648..>356848)	Acanthamoeba castellanii str. Neff	14922278
ACA1_183210	mRNA	ACA1_183210	NW_004457592.1	356987	357911	R	ACA1_183210	complement(join(<356987..357210,357301..357377,357523..357657,357772..>357911))	Acanthamoeba castellanii str. Neff	14922279
ACA1_183220	mRNA	ACA1_183220	NW_004457592.1	358392	359506	R	ACA1_183220	complement(join(<358392..358544,358664..358732,358826..358897,359024..359166,359287..>359506))	Acanthamoeba castellanii str. Neff	14922280
ACA1_183230	mRNA	ACA1_183230	NW_004457592.1	359881	360348	D	ACA1_183230	<359881..>360348	Acanthamoeba castellanii str. Neff	14922281
ACA1_183240	mRNA	ACA1_183240	NW_004457592.1	360928	362763	D	ACA1_183240	join(<360928..360974,361040..361225,361337..361472,361560..361740,361815..362267,362477..362649,362725..>362763)	Acanthamoeba castellanii str. Neff	14922282
ACA1_183250	mRNA	ACA1_183250	NW_004457592.1	362987	364506	R	ACA1_183250	complement(join(<362987..363239,363306..363502,363602..363766,363834..363896,364001..364083,364178..364306,364395..>364506))	Acanthamoeba castellanii str. Neff	14922283
ACA1_183260	mRNA	ACA1_183260	NW_004457592.1	364659	365748	D	ACA1_183260	join(<364659..364956,365087..365196,365561..365613,365649..>365748)	Acanthamoeba castellanii str. Neff	14922284
ACA1_183270	mRNA	ACA1_183270	NW_004457592.1	365949	370657	D	ACA1_183270	join(<365949..366038,366489..366592,366706..367229,367365..367552,367634..367725,367788..367828,367924..368045,368171..368235,368341..368401,368477..368581,368704..368850,368969..369072,369130..>370657)	Acanthamoeba castellanii str. Neff	14922285
ACA1_183280	mRNA	ACA1_183280	NW_004457592.1	371102	372189	D	ACA1_183280	join(<371102..371180,371264..>372189)	Acanthamoeba castellanii str. Neff	14922286
ACA1_183290	mRNA	ACA1_183290	NW_004457592.1	372986	374041	D	ACA1_183290	join(<372986..373064,373098..>374041)	Acanthamoeba castellanii str. Neff	14922287
ACA1_183300	mRNA	ACA1_183300	NW_004457592.1	374543	375521	D	ACA1_183300	join(<374543..374782,374919..375144,375247..>375521)	Acanthamoeba castellanii str. Neff	14922288
ACA1_183310	mRNA	ACA1_183310	NW_004457592.1	375663	377883	D	ACA1_183310	join(<375663..375668,375763..375826,375941..376014,376126..376239,376354..376461,376599..376739,376846..377079,377204..377273,377406..377570,377666..>377883)	Acanthamoeba castellanii str. Neff	14922289
ACA1_183320	mRNA	ACA1_183320	NW_004457592.1	378073	379271	D	ACA1_183320	join(<378073..378415,378602..378693,378799..379045,379156..>379271)	Acanthamoeba castellanii str. Neff	14922290
ACA1_183330	mRNA	ACA1_183330	NW_004457592.1	379883	380557	R	ACA1_183330	complement(join(<379883..380179,380252..380306,380370..>380557))	Acanthamoeba castellanii str. Neff	14922291
ACA1_183340	mRNA	ACA1_183340	NW_004457592.1	380581	381309	R	ACA1_183340	complement(<380581..>381309)	Acanthamoeba castellanii str. Neff	14922292
ACA1_183350	mRNA	ACA1_183350	NW_004457592.1	383317	384692	D	ACA1_183350	join(<383317..383454,383574..383658,383763..383835,383946..384115,384267..384305,384406..>384692)	Acanthamoeba castellanii str. Neff	14922293
ACA1_183360	mRNA	ACA1_183360	NW_004457592.1	384860	385753	D	ACA1_183360	<384860..>385753	Acanthamoeba castellanii str. Neff	14922294
ACA1_183370	mRNA	ACA1_183370	NW_004457592.1	385917	389030	D	ACA1_183370	join(<385917..386204,386271..386432,386511..386720,386824..387207,387273..387397,387486..387607,387711..387845,387923..388081,388151..388250,388306..388428,388825..388889,388957..>389030)	Acanthamoeba castellanii str. Neff	14922295
ACA1_183380	mRNA	ACA1_183380	NW_004457592.1	389155	389478	R	ACA1_183380	complement(<389155..>389478)	Acanthamoeba castellanii str. Neff	14922296
ACA1_183390	mRNA	ACA1_183390	NW_004457592.1	390885	400340	R	ACA1_183390	complement(join(<390885..390894,391181..391304,391403..391442,391595..391769,391841..391903,391991..392429,392552..392709,392817..392915,393040..393220,393314..394073,394207..394404,394574..394741,394839..395030,395046..395185,395288..395718,395798..395918,395998..396111,396327..396446,396523..396898,397027..397159,397247..397367,397461..397606,397701..397813,397904..397993,398077..398520,398623..398714,398811..398915,399007..399330,399439..399589,399688..399995,400118..400164,400234..>400340))	Acanthamoeba castellanii str. Neff	14922297
ACA1_183400	mRNA	ACA1_183400	NW_004457592.1	400672	401788	D	ACA1_183400	join(<400672..400818,400923..401025,401112..401245,401409..401591,401654..>401788)	Acanthamoeba castellanii str. Neff	14922298
ACA1_183410	mRNA	ACA1_183410	NW_004457592.1	401900	402269	R	ACA1_183410	complement(join(<401900..401965,402043..402088,402163..>402269))	Acanthamoeba castellanii str. Neff	14922299
ACA1_183420	mRNA	ACA1_183420	NW_004457592.1	402382	404598	D	ACA1_183420	join(<402382..402456,402563..402643,402732..402812,402895..402952,403092..403204,403305..403455,403547..403619,403721..403889,403997..404148,404232..404359,404474..>404598)	Acanthamoeba castellanii str. Neff	14922300
ACA1_183430	mRNA	ACA1_183430	NW_004457592.1	405049	407768	D	ACA1_183430	join(<405049..405333,405444..405472,405593..405679,406357..406445,406567..406637,406761..406953,407051..407179,407244..407358,407469..407541,407643..>407768)	Acanthamoeba castellanii str. Neff	14922301
ACA1_183440	mRNA	ACA1_183440	NW_004457592.1	408156	410469	D	ACA1_183440	join(<408156..408219,408312..408412,408501..408819,408902..408970,409119..409259,409358..409573,409682..409818,409898..410011,410100..410288,410371..>410469)	Acanthamoeba castellanii str. Neff	14922302
ACA1_183460	mRNA	ACA1_183460	NW_004457592.1	416779	420209	R	ACA1_183460	complement(join(<416779..416846,416926..417086,417267..417344,417555..417642,417830..418586,418678..418837,418964..419138,419345..419435,419541..419626,419831..>420209))	Acanthamoeba castellanii str. Neff	14922304
ACA1_183470	mRNA	ACA1_183470	NW_004457592.1	420545	423847	D	ACA1_183470	join(<420545..420649,420797..420905,421068..421214,421295..421438,421525..421654,421746..421889,422048..422214,422319..422380,422504..422611,422810..423131,423261..423365,423452..423566,423691..>423847)	Acanthamoeba castellanii str. Neff	14922305
ACA1_183480	mRNA	ACA1_183480	NW_004457592.1	423944	426511	R	ACA1_183480	complement(join(<423944..424009,424169..424281,424396..424521,424655..424761,424853..424981,425064..425208,425314..425545,425652..425752,425870..425959,426076..426168,426294..426365,426457..>426511))	Acanthamoeba castellanii str. Neff	14922306
ACA1_183490	mRNA	ACA1_183490	NW_004457592.1	427248	431323	D	ACA1_183490	join(<427248..427283,427509..427593,427760..427904,428038..428131,428268..428351,428517..428580,428735..428822,429010..429131,429276..429345,429455..429569,429702..429846,429963..429988,430095..430370,430481..>431323)	Acanthamoeba castellanii str. Neff	14922307
ACA1_183500	mRNA	ACA1_183500	NW_004457592.1	432196	434039	D	ACA1_183500	join(<432196..432476,432647..432756,432887..433019,433179..433313,433401..433477,433630..433834,433931..>434039)	Acanthamoeba castellanii str. Neff	14922308
ACA1_183510	mRNA	ACA1_183510	NW_004457592.1	434227	436496	D	ACA1_183510	join(<434227..434386,434539..434669,434786..435019,435107..435305,435423..435522,435637..435741,435867..436221,436308..>436496)	Acanthamoeba castellanii str. Neff	14922309
ACA1_183520	mRNA	ACA1_183520	NW_004457592.1	436596	437531	D	ACA1_183520	<436596..>437531	Acanthamoeba castellanii str. Neff	14922310
ACA1_183530	mRNA	ACA1_183530	NW_004457592.1	438177	448232	R	ACA1_183530	complement(join(<438177..438350,438419..438498,438601..438726,438834..439113,439232..440713,440843..440996,441101..442584,442690..442934,443049..443197,443357..443448,443512..443673,443839..443942,444044..444253,444318..444481,444549..444627,444741..444846,444941..445050,445137..445220,445546..445599,445842..446232,446334..446536,446604..448048,448225..>448232))	Acanthamoeba castellanii str. Neff	14922311
ACA1_183540	mRNA	ACA1_183540	NW_004457592.1	449170	450396	D	ACA1_183540	<449170..>450396	Acanthamoeba castellanii str. Neff	14922312
ACA1_183560	mRNA	ACA1_183560	NW_004457592.1	454401	454943	D	ACA1_183560	join(<454401..454516,454589..454647,454711..454798,454877..>454943)	Acanthamoeba castellanii str. Neff	14922314
ACA1_183570	mRNA	ACA1_183570	NW_004457592.1	455075	456899	R	ACA1_183570	complement(join(<455075..455354,455437..455567,455692..455803,455908..456069,456180..456251,456337..456505,456626..>456899))	Acanthamoeba castellanii str. Neff	14922315
ACA1_183580	mRNA	ACA1_183580	NW_004457592.1	457128	458674	R	ACA1_183580	complement(join(<457128..457223,457372..457509,457626..457701,457777..457888,458021..458147,458279..>458674))	Acanthamoeba castellanii str. Neff	14922316
ACA1_183590	mRNA	ACA1_183590	NW_004457592.1	458989	460798	D	ACA1_183590	join(<458989..459211,459278..459377,459508..459703,459790..459942,460007..460232,460335..460468,460571..>460798)	Acanthamoeba castellanii str. Neff	14922317
ACA1_183600	mRNA	ACA1_183600	NW_004457592.1	460882	462740	R	ACA1_183600	complement(join(<460882..461542,461609..461715,461787..461815,461981..462098,462200..462351,462467..462544,462692..>462740))	Acanthamoeba castellanii str. Neff	14922318
ACA1_183610	mRNA	ACA1_183610	NW_004457592.1	462916	463763	R	ACA1_183610	complement(join(<462916..463303,463335..463419,463439..463537,463721..>463763))	Acanthamoeba castellanii str. Neff	14922319
ACA1_183620	mRNA	ACA1_183620	NW_004457592.1	464215	466189	R	ACA1_183620	complement(join(<464215..464416,464520..464713,464808..465563,465673..465798,465809..465916,466085..>466189))	Acanthamoeba castellanii str. Neff	14922320
ACA1_183630	mRNA	ACA1_183630	NW_004457592.1	466514	467539	R	ACA1_183630	complement(join(<466514..466699,466777..466919,466993..467176,467266..467376,467456..>467539))	Acanthamoeba castellanii str. Neff	14922321
ACA1_183640	mRNA	ACA1_183640	NW_004457592.1	469925	471656	R	ACA1_183640	complement(join(<469925..470032,470053..471063,471198..>471656))	Acanthamoeba castellanii str. Neff	14922322
ACA1_183650	mRNA	ACA1_183650	NW_004457592.1	471961	474069	D	ACA1_183650	join(<471961..472260,472353..472701,472770..472855,472952..473086,473459..473554,473653..473770,473858..>474069)	Acanthamoeba castellanii str. Neff	14922323
ACA1_183660	mRNA	ACA1_183660	NW_004457592.1	474186	476991	D	ACA1_183660	join(<474186..474381,474467..474532,474600..474721,474829..474948,475239..475359,475493..475646,475727..475844,475921..475999,476058..476139,476203..476361,476465..476556,476621..476691,476818..>476991)	Acanthamoeba castellanii str. Neff	14922324
ACA1_183670	mRNA	ACA1_183670	NW_004457592.1	477618	480023	D	ACA1_183670	join(<477618..477912,478010..478137,478235..478321,478408..478481,478562..478638,478699..478752,479001..479058,479144..479217,479326..479510,479664..479783,479901..>480023)	Acanthamoeba castellanii str. Neff	14922325
ACA1_183680	mRNA	ACA1_183680	NW_004457592.1	480258	481732	D	ACA1_183680	join(<480258..480408,480487..480515,480643..480785,480880..481215,481360..>481732)	Acanthamoeba castellanii str. Neff	14922326
ACA1_183690	mRNA	ACA1_183690	NW_004457592.1	483019	485038	R	ACA1_183690	complement(join(<483019..483195,483328..483391,483477..483495,483570..483620,483730..483807,483925..484386,484493..484919,484988..>485038))	Acanthamoeba castellanii str. Neff	14922327
ACA1_183700	mRNA	ACA1_183700	NW_004457592.1	485181	486089	R	ACA1_183700	complement(join(<485181..485243,485289..>486089))	Acanthamoeba castellanii str. Neff	14922328
ACA1_183710	mRNA	ACA1_183710	NW_004457592.1	486184	490453	R	ACA1_183710	complement(join(<486184..486251,486348..486454,486534..486802,486902..486994,487087..487179,487333..487376,487449..487518,487599..487687,487759..487850,487953..488037,488113..488189,488262..488555,488657..488722,488801..488879,488953..489128,489206..489312,489414..489545,489602..489963,490035..490296,490391..>490453))	Acanthamoeba castellanii str. Neff	14922329
ACA1_183720	mRNA	ACA1_183720	NW_004457592.1	490632	491270	D	ACA1_183720	join(<490632..490889,490971..>491270)	Acanthamoeba castellanii str. Neff	14922330
ACA1_183730	mRNA	ACA1_183730	NW_004457592.1	491314	492894	R	ACA1_183730	complement(join(<491314..491330,491471..491540,491551..491626,491712..491785,491872..491987,492068..492219,492410..>492894))	Acanthamoeba castellanii str. Neff	14922331
ACA1_183740	mRNA	ACA1_183740	NW_004457592.1	493196	495498	D	ACA1_183740	join(<493196..493341,493410..493531,493616..493681,493759..493889,493952..494022,494085..494187,494266..494359,494476..494828,495050..495210,495381..>495498)	Acanthamoeba castellanii str. Neff	14922332
ACA1_183750	mRNA	ACA1_183750	NW_004457592.1	495791	499248	D	ACA1_183750	join(<495791..496173,496297..496423,496656..496855,496941..497050,497173..497297,497482..497571,497692..497768,497846..498241,498369..498593,498675..498755,498873..498989,499089..>499248)	Acanthamoeba castellanii str. Neff	14922333
ACA1_183760	mRNA	ACA1_183760	NW_004457592.1	499287	501551	R	ACA1_183760	complement(join(<499287..499954,500039..500130,500263..500364,500520..500598,500690..500786,500920..501033,501143..501278,501475..>501551))	Acanthamoeba castellanii str. Neff	14922334
ACA1_183770	mRNA	ACA1_183770	NW_004457592.1	502512	505669	R	ACA1_183770	complement(join(<502512..502622,502706..502947,503036..503173,503257..503341,503463..503648,503742..503883,503961..504286,504409..504566,504717..504868,505004..505111,505213..505267,505492..>505669))	Acanthamoeba castellanii str. Neff	14922335
ACA1_183780	mRNA	ACA1_183780	NW_004457592.1	506084	507565	R	ACA1_183780	complement(join(<506084..507145,507323..>507565))	Acanthamoeba castellanii str. Neff	14922336
ACA1_183790	mRNA	ACA1_183790	NW_004457592.1	509348	509832	D	ACA1_183790	join(<509348..509357,509439..509733,509808..>509832)	Acanthamoeba castellanii str. Neff	14922337
ACA1_183900	mRNA	ACA1_183900	NW_004457592.1	512090	515888	D	ACA1_183900	join(<512090..512558,512667..512796,512882..512991,513105..513187,513280..513358,513461..513537,513630..513752,513861..513940,514014..514152,514243..514328,514425..514506,514607..514738,514854..514918,515020..515083,515224..515363,515543..515732,515814..>515888)	Acanthamoeba castellanii str. Neff	14922338
ACA1_183910	mRNA	ACA1_183910	NW_004457592.1	518050	519959	D	ACA1_183910	join(<518050..518173,518247..518332,518460..518648,518756..518836,518912..519064,519162..519350,519435..519627,519707..519789,519885..>519959)	Acanthamoeba castellanii str. Neff	14922339
ACA1_183920	mRNA	ACA1_183920	NW_004457592.1	520526	521383	D	ACA1_183920	<520526..>521383	Acanthamoeba castellanii str. Neff	14922340
ACA1_183930	mRNA	ACA1_183930	NW_004457592.1	521610	521974	R	ACA1_183930	complement(join(<521610..521708,521767..521837,521905..>521974))	Acanthamoeba castellanii str. Neff	14922341
ACA1_183940	mRNA	ACA1_183940	NW_004457592.1	522177	524694	R	ACA1_183940	complement(join(<522177..522289,522376..522528,522624..522701,522769..522894,522963..523058,523136..523246,523339..523378,523669..523798,523866..523947,524082..524160,524254..524414,524514..>524694))	Acanthamoeba castellanii str. Neff	14922342
ACA1_183950	mRNA	ACA1_183950	NW_004457592.1	525594	527554	R	ACA1_183950	complement(join(<525594..526001,526074..526181,526256..526351,526438..526571,526651..>527554))	Acanthamoeba castellanii str. Neff	14922343
ACA1_183960	mRNA	ACA1_183960	NW_004457592.1	527656	530544	R	ACA1_183960	complement(join(<527656..527800,527902..528043,528145..528227,528300..528415,528481..528585,528683..528778,528887..528936,529023..529171,529269..529352,529425..529517,529590..529674,529741..529930,530059..530153,530354..530373,530471..>530544))	Acanthamoeba castellanii str. Neff	14922344
ACA1_183970	mRNA	ACA1_183970	NW_004457592.1	530772	534285	R	ACA1_183970	complement(join(<530772..530980,531079..531672,531734..531829,531918..531964,532124..532217,532317..532391,532484..532561,532629..532700,532843..532902,532980..533051,533283..533357,533441..533533,533602..533676,533763..533863,533923..534067,534159..>534285))	Acanthamoeba castellanii str. Neff	14922345
ACA1_183980	mRNA	ACA1_183980	NW_004457592.1	534725	535842	R	ACA1_183980	complement(join(<534725..534859,534954..535038,535157..535259,535357..535503,535614..>535842))	Acanthamoeba castellanii str. Neff	14922346
ACA1_183990	mRNA	ACA1_183990	NW_004457592.1	536096	539836	D	ACA1_183990	join(<536096..536135,536200..536268,536352..536447,536527..536663,536762..536828,536987..537255,537330..537708,537814..538117,538193..538301,538707..538893,538963..539063,539181..539322,539413..539522,539609..>539836)	Acanthamoeba castellanii str. Neff	14922347
ACA1_184000	mRNA	ACA1_184000	NW_004457592.1	542974	543720	R	ACA1_184000	complement(join(<542974..542997,543124..543261,543403..543479,543627..>543720))	Acanthamoeba castellanii str. Neff	14922348
ACA1_184010	mRNA	ACA1_184010	NW_004457592.1	543999	544520	D	ACA1_184010	<543999..>544520	Acanthamoeba castellanii str. Neff	14922349
ACA1_184020	mRNA	ACA1_184020	NW_004457592.1	544887	546600	D	ACA1_184020	join(<544887..545550,545702..546318,546343..>546600)	Acanthamoeba castellanii str. Neff	14922350
ACA1_184030	mRNA	ACA1_184030	NW_004457592.1	547142	547621	D	ACA1_184030	join(<547142..547345,547418..>547621)	Acanthamoeba castellanii str. Neff	14922351
ACA1_184040	mRNA	ACA1_184040	NW_004457592.1	547793	548421	R	ACA1_184040	complement(join(<547793..547943,548020..548236,548319..>548421))	Acanthamoeba castellanii str. Neff	14922352
ACA1_184050	mRNA	ACA1_184050	NW_004457592.1	548590	550556	R	ACA1_184050	complement(join(<548590..548817,548915..549009,549081..549414,549516..549617,549703..549778,549884..549950,550024..550138,550240..550389,550491..>550556))	Acanthamoeba castellanii str. Neff	14922353
ACA1_184060	mRNA	ACA1_184060	NW_004457592.1	551017	552544	R	ACA1_184060	complement(join(<551017..551786,551905..>552544))	Acanthamoeba castellanii str. Neff	14922354
ACA1_184070	mRNA	ACA1_184070	NW_004457592.1	553121	554006	D	ACA1_184070	join(<553121..553315,553396..553572,553662..>554006)	Acanthamoeba castellanii str. Neff	14922355
ACA1_184080	mRNA	ACA1_184080	NW_004457592.1	554361	555706	D	ACA1_184080	join(<554361..554391,554520..554591,554661..554848,554908..554974,555085..555154,555228..555372,555479..555533,555645..>555706)	Acanthamoeba castellanii str. Neff	14922356
ACA1_184090	mRNA	ACA1_184090	NW_004457592.1	555804	558456	R	ACA1_184090	complement(join(<555804..555950,556083..556253,556444..556617,556724..556797,556897..556974,557080..557578,557682..557756,557917..558001,558129..558199,558292..>558456))	Acanthamoeba castellanii str. Neff	14922357
ACA1_184100	mRNA	ACA1_184100	NW_004457592.1	558952	560111	R	ACA1_184100	complement(join(<558952..559122,559230..>560111))	Acanthamoeba castellanii str. Neff	14922358
ACA1_184110	mRNA	ACA1_184110	NW_004457592.1	560978	563757	D	ACA1_184110	join(<560978..561007,561078..561164,561425..561552,561645..562409,562544..562778,562870..>563757)	Acanthamoeba castellanii str. Neff	14922359
ACA1_184120	mRNA	ACA1_184120	NW_004457592.1	564338	565672	R	ACA1_184120	complement(join(<564338..565351,565440..565534,565606..>565672))	Acanthamoeba castellanii str. Neff	14922360
ACA1_184130	mRNA	ACA1_184130	NW_004457592.1	566071	567405	R	ACA1_184130	complement(join(<566071..566871,566993..567119,567245..>567405))	Acanthamoeba castellanii str. Neff	14922361
ACA1_184140	mRNA	ACA1_184140	NW_004457592.1	567513	567962	R	ACA1_184140	complement(join(<567513..567740,567867..>567962))	Acanthamoeba castellanii str. Neff	14922362
ACA1_184150	mRNA	ACA1_184150	NW_004457592.1	568553	572286	R	ACA1_184150	complement(join(<568553..569069,569226..569344,569422..570247,570327..570492,570596..572018,572221..>572286))	Acanthamoeba castellanii str. Neff	14922363
ACA1_184160	mRNA	ACA1_184160	NW_004457592.1	573046	574744	D	ACA1_184160	join(<573046..573081,573214..573787,573912..574029,574141..574494,574585..>574744)	Acanthamoeba castellanii str. Neff	14922364
ACA1_184170	mRNA	ACA1_184170	NW_004457592.1	575002	575211	D	ACA1_184170	join(<575002..575136,575149..>575211)	Acanthamoeba castellanii str. Neff	14922365
ACA1_184180	mRNA	ACA1_184180	NW_004457592.1	576206	577245	D	ACA1_184180	join(<576206..576598,576676..>577245)	Acanthamoeba castellanii str. Neff	14922366
ACA1_184190	mRNA	ACA1_184190	NW_004457592.1	578205	581010	D	ACA1_184190	join(<578205..578652,578736..578873,578981..579354,579450..579520,579543..579590,579619..580171,580183..>581010)	Acanthamoeba castellanii str. Neff	14922367
ACA1_184200	mRNA	ACA1_184200	NW_004457592.1	581810	582482	R	ACA1_184200	complement(join(<581810..581944,582051..582141,582215..582319,582382..>582482))	Acanthamoeba castellanii str. Neff	14922368
ACA1_184210	mRNA	ACA1_184210	NW_004457592.1	582701	584099	R	ACA1_184210	complement(join(<582701..583029,583126..583284,583426..583525,583679..583797,583886..>584099))	Acanthamoeba castellanii str. Neff	14922369
ACA1_184220	mRNA	ACA1_184220	NW_004457592.1	584974	587724	R	ACA1_184220	complement(join(<584974..584981,585065..585187,585291..585797,585897..586207,586309..586388,586489..586542,586680..587272,587430..>587724))	Acanthamoeba castellanii str. Neff	14922370
ACA1_184230	mRNA	ACA1_184230	NW_004457592.1	588552	589529	R	ACA1_184230	complement(<588552..>589529)	Acanthamoeba castellanii str. Neff	14922371
ACA1_184240	mRNA	ACA1_184240	NW_004457592.1	591099	591410	R	ACA1_184240	complement(<591099..>591410)	Acanthamoeba castellanii str. Neff	14922372
ACA1_184250	mRNA	ACA1_184250	NW_004457592.1	591965	593370	D	ACA1_184250	join(<591965..592405,592473..592622,592693..592918,593031..593204,593285..>593370)	Acanthamoeba castellanii str. Neff	14922373
ACA1_184260	mRNA	ACA1_184260	NW_004457592.1	593468	596357	R	ACA1_184260	complement(join(<593468..593629,593721..593823,593920..594016,594090..594176,594327..594430,594505..594592,594668..594750,594826..594878,595175..595303,595449..595514,595588..595655,595727..595801,595934..596038,596099..596192,596271..>596357))	Acanthamoeba castellanii str. Neff	14922374
ACA1_184270	mRNA	ACA1_184270	NW_004457592.1	596787	600655	D	ACA1_184270	join(<596787..596905,597044..597137,597249..597342,597431..597520,597592..597705,597810..597899,597965..598030,598117..598197,598276..598367,598485..599019,599108..599215,599321..599455,599545..599655,599742..599922,599987..600039,600120..600137,600154..600306,600378..>600655)	Acanthamoeba castellanii str. Neff	14922375
ACA1_184280	mRNA	ACA1_184280	NW_004457592.1	600760	606228	D	ACA1_184280	join(<600760..600795,601017..601209,601298..601372,601432..601533,601619..601757,601847..601936,602093..602302,602392..602431,602511..602568,602652..602974,603057..603160,603251..603385,603450..603652,603738..603823,603910..604074,604158..604255,604324..604496,604594..604737,604812..604873,604959..605083,605166..605265,605336..605410,605472..605565,605651..605736,605806..605882,606015..>606228)	Acanthamoeba castellanii str. Neff	14922376
ACA1_184290	mRNA	ACA1_184290	NW_004457592.1	606392	611799	D	ACA1_184290	join(<606392..606497,606568..606629,606695..606787,606853..606918,606995..607097,607151..607299,607386..607461,607560..607690,607801..607901,607979..608102,608186..608269,608374..608493,608574..608784,608861..609036,609127..609264,609353..609436,609510..609569,609655..609759,609817..609890,609961..610077,610173..610296,610336..610485,610560..610664,610745..610795,610874..610957,611032..611122,611202..611356,611432..611560,611662..>611799)	Acanthamoeba castellanii str. Neff	14922377
ACA1_184300	mRNA	ACA1_184300	NW_004457592.1	612201	615305	D	ACA1_184300	join(<612201..612892,612989..614049,614134..614498,614610..>615305)	Acanthamoeba castellanii str. Neff	14922378
ACA1_184310	mRNA	ACA1_184310	NW_004457592.1	615698	617322	D	ACA1_184310	join(<615698..615775,615919..616024,616135..616303,616429..616770,616871..617104,617244..>617322)	Acanthamoeba castellanii str. Neff	14922379
ACA1_184320	mRNA	ACA1_184320	NW_004457592.1	617597	618088	R	ACA1_184320	complement(<617597..>618088)	Acanthamoeba castellanii str. Neff	14922380
ACA1_184330	mRNA	ACA1_184330	NW_004457592.1	618902	620588	R	ACA1_184330	complement(join(<618902..619473,619553..619706,619792..619910,620009..620246,620261..620473,620499..>620588))	Acanthamoeba castellanii str. Neff	14922381
ACA1_184340	mRNA	ACA1_184340	NW_004457592.1	620874	622499	R	ACA1_184340	complement(join(<620874..621179,621254..621366,621438..621597,621670..621747,621816..622256,622332..>622499))	Acanthamoeba castellanii str. Neff	14922382
ACA1_184360	mRNA	ACA1_184360	NW_004457592.1	626320	629170	R	ACA1_184360	complement(join(<626320..626636,626708..626873,626975..627117,627429..627758,627835..628077,628157..628250,628316..628939,629054..>629170))	Acanthamoeba castellanii str. Neff	14922384
ACA1_184370	mRNA	ACA1_184370	NW_004457592.1	629364	630578	D	ACA1_184370	join(<629364..629812,630027..630130,630177..630271,630359..630525,630539..>630578)	Acanthamoeba castellanii str. Neff	14922385
ACA1_184380	mRNA	ACA1_184380	NW_004457592.1	630995	631969	R	ACA1_184380	complement(join(<630995..631246,631359..631700,631826..>631969))	Acanthamoeba castellanii str. Neff	14922386
ACA1_184390	mRNA	ACA1_184390	NW_004457592.1	632584	633531	D	ACA1_184390	join(<632584..633021,633124..>633531)	Acanthamoeba castellanii str. Neff	14922387
ACA1_184400	mRNA	ACA1_184400	NW_004457592.1	633588	636320	R	ACA1_184400	complement(join(<633588..633898,633980..634145,634240..634382,634452..634538,634611..634994,635079..635324,635409..635502,635592..636194,636285..>636320))	Acanthamoeba castellanii str. Neff	14922388
ACA1_184410	mRNA	ACA1_184410	NW_004457592.1	636582	637880	R	ACA1_184410	complement(join(<636582..637419,637447..>637880))	Acanthamoeba castellanii str. Neff	14922389
ACA1_184420	mRNA	ACA1_184420	NW_004457592.1	638120	641268	D	ACA1_184420	join(<638120..638203,638327..638437,638590..638731,638812..638985,639080..639194,639300..639360,639455..639596,639681..639793,639853..639983,640093..640192,640286..640355,640462..640559,640663..640834,640902..640959,641038..641113,641242..>641268)	Acanthamoeba castellanii str. Neff	14922390
ACA1_184430	mRNA	ACA1_184430	NW_004457592.1	641783	644522	D	ACA1_184430	join(<641783..641890,642022..642142,642278..642363,642472..642589,642677..642737,642853..642941,643046..643167,643257..643449,643524..643591,643920..644014,644092..644204,644281..644348,644427..>644522)	Acanthamoeba castellanii str. Neff	14922391
ACA1_184440	mRNA	ACA1_184440	NW_004457592.1	644695	647037	R	ACA1_184440	complement(join(<644695..646456,646564..646684,646896..>647037))	Acanthamoeba castellanii str. Neff	14922392
ACA1_184450	mRNA	ACA1_184450	NW_004457592.1	647544	649735	D	ACA1_184450	join(<647544..647690,647842..648003,648128..648271,648360..648412,648520..648634,648734..648814,648884..648949,649044..649130,649202..649258,649337..649455,649534..>649735)	Acanthamoeba castellanii str. Neff	14922393
ACA1_184460	mRNA	ACA1_184460	NW_004457592.1	649856	651602	D	ACA1_184460	join(<649856..650022,650095..650211,650344..650407,650526..650648,650847..651042,651134..651212,651304..651367,651435..651490,651551..>651602)	Acanthamoeba castellanii str. Neff	14922394
ACA1_184470	mRNA	ACA1_184470	NW_004457592.1	652257	653428	D	ACA1_184470	join(<652257..652586,652694..652850,653111..653385,653414..>653428)	Acanthamoeba castellanii str. Neff	14922395
ACA1_184480	mRNA	ACA1_184480	NW_004457592.1	654000	654304	D	ACA1_184480	join(<654000..654212,654275..>654304)	Acanthamoeba castellanii str. Neff	14922396
ACA1_184490	mRNA	ACA1_184490	NW_004457592.1	654952	658058	D	ACA1_184490	join(<654952..655018,655138..655293,655376..655692,655799..655944,656029..656183,656260..656483,656598..656802,656906..657010,657108..657218,657288..657568,657672..>658058)	Acanthamoeba castellanii str. Neff	14922397
ACA1_110850	mRNA	ACA1_110850	NW_004457591.1	1	1313	R	ACA1_110850	complement(join(<1..115,176..241,307..444,509..764,837..>1313))	Acanthamoeba castellanii str. Neff	14922146
ACA1_110860	mRNA	ACA1_110860	NW_004457591.1	1777	4093	D	ACA1_110860	join(<1777..2157,2312..2465,2541..2625,2720..2831,2903..3063,3131..3263,3338..3450,3528..3648,3730..3841,3909..4006,4052..>4093)	Acanthamoeba castellanii str. Neff	14922131
ACA1_110870	mRNA	ACA1_110870	NW_004457591.1	4503	4913	D	ACA1_110870	<4503..>4913	Acanthamoeba castellanii str. Neff	14922132
ACA1_110880	mRNA	ACA1_110880	NW_004457591.1	5374	8551	D	ACA1_110880	join(<5374..5611,5667..5815,5887..6016,6046..6110,6187..6257,6380..6612,6704..6760,6876..6961,7133..7222,7410..7484,7684..7733,7844..7946,8041..8146,8232..8362,8453..>8551)	Acanthamoeba castellanii str. Neff	14922133
ACA1_110890	mRNA	ACA1_110890	NW_004457591.1	8980	11037	D	ACA1_110890	join(<8980..9085,9204..9498,9687..9814,9898..9931,10047..10255,10348..10505,10594..10693,10763..>11037)	Acanthamoeba castellanii str. Neff	14922134
ACA1_110900	mRNA	ACA1_110900	NW_004457591.1	11140	11821	R	ACA1_110900	complement(join(<11140..11297,11360..11417,11521..11536,11547..11607,11664..11727,11777..>11821))	Acanthamoeba castellanii str. Neff	14922135
ACA1_110910	mRNA	ACA1_110910	NW_004457591.1	12111	14913	R	ACA1_110910	complement(join(<12111..12473,12618..12739,12839..12957,13056..13306,13390..13523,13640..13806,13878..14004,14100..14209,14287..14392,14501..14612,14714..14800,14875..>14913))	Acanthamoeba castellanii str. Neff	14922136
ACA1_110920	mRNA	ACA1_110920	NW_004457591.1	15089	16316	R	ACA1_110920	complement(join(<15089..15097,15222..15332,15397..15441,15567..15716,15789..15866,15947..15987,16103..>16316))	Acanthamoeba castellanii str. Neff	14922137
ACA1_110930	mRNA	ACA1_110930	NW_004457591.1	16580	18188	R	ACA1_110930	complement(join(<16580..16863,16948..17058,17133..17181,17477..17861,17941..>18188))	Acanthamoeba castellanii str. Neff	14922138
ACA1_110940	mRNA	ACA1_110940	NW_004457591.1	18368	19764	D	ACA1_110940	join(<18368..19068,19323..>19764)	Acanthamoeba castellanii str. Neff	14922139
ACA1_111050	mRNA	ACA1_111050	NW_004457591.1	20249	20548	D	ACA1_111050	<20249..>20548	Acanthamoeba castellanii str. Neff	14922140
ACA1_111060	mRNA	ACA1_111060	NW_004457591.1	20754	22047	R	ACA1_111060	complement(join(<20754..20960,21047..21110,21188..21291,21393..21464,21601..21869,22014..>22047))	Acanthamoeba castellanii str. Neff	14922141
ACA1_111070	mRNA	ACA1_111070	NW_004457591.1	22255	25467	R	ACA1_111070	complement(join(<22255..23039,23119..23242,23327..23887,23989..24142,24297..24612,24690..>25467))	Acanthamoeba castellanii str. Neff	14922142
ACA1_111080	mRNA	ACA1_111080	NW_004457591.1	26729	31935	R	ACA1_111080	complement(join(<26729..26867,26960..27032,27105..27260,27357..27618,27662..27810,27892..28093,28205..28386,28487..28606,28749..28892,28987..29164,29259..29402,29503..29700,29794..30000,30071..30219,30361..30514,30613..30804,30941..31102,31273..31403,31534..31673,31883..>31935))	Acanthamoeba castellanii str. Neff	14922143
ACA1_111090	mRNA	ACA1_111090	NW_004457591.1	32432	32989	D	ACA1_111090	join(<32432..32481,32623..32758,32873..>32989)	Acanthamoeba castellanii str. Neff	14922144
ACA1_111100	mRNA	ACA1_111100	NW_004457591.1	33103	33590	D	ACA1_111100	join(<33103..33325,33427..>33590)	Acanthamoeba castellanii str. Neff	14922145
ACA1_024360	mRNA	ACA1_024360	NW_004457589.1	267	1505	D	ACA1_024360	join(<267..291,562..834,954..1171,1283..>1505)	Acanthamoeba castellanii str. Neff	14922130
ACA1_024370	mRNA	ACA1_024370	NW_004457589.1	1677	2591	R	ACA1_024370	complement(join(<1677..2360,2508..>2591))	Acanthamoeba castellanii str. Neff	14922129
ACA1_024380	mRNA	ACA1_024380	NW_004457589.1	3027	9583	R	ACA1_024380	complement(join(<3027..3147,3233..3627,3717..3785,3952..4198,4282..4557,4638..4744,4832..5064,5148..5303,5402..5981,6055..6395,6469..6725,6830..7031,7104..7587,7649..7747,7772..7925,7993..8323,8395..8536,8624..8794,8954..9076,9233..9337,9461..>9583))	Acanthamoeba castellanii str. Neff	14922123
ACA1_024390	mRNA	ACA1_024390	NW_004457589.1	10369	12724	D	ACA1_024390	join(<10369..10495,10568..10665,10880..10942,10986..11090,11172..11270,11361..11445,11507..11977,12048..12137,12233..12563,12634..>12724)	Acanthamoeba castellanii str. Neff	14922124
ACA1_024400	mRNA	ACA1_024400	NW_004457589.1	13026	13592	R	ACA1_024400	complement(<13026..>13592)	Acanthamoeba castellanii str. Neff	14922125
ACA1_024410	mRNA	ACA1_024410	NW_004457589.1	14934	23009	D	ACA1_024410	join(<14934..15323,15535..15639,15720..16299,16379..16690,16764..16931,17012..17409,17505..17621,17720..17846,17970..18384,18502..18629,18706..18812,18896..18973,19067..19181,19297..19491,19561..19712,19813..19962,20041..20186,20267..20698,20900..21205,21421..21610,21688..21911,21989..22128,22215..22540,22570..22822,22900..>23009)	Acanthamoeba castellanii str. Neff	14922126
ACA1_024420	mRNA	ACA1_024420	NW_004457589.1	23141	24824	D	ACA1_024420	join(<23141..23168,23243..23263,23335..23393,23470..23569,23651..23809,23875..24034,24122..24218,24278..24353,24449..24519,24693..>24824)	Acanthamoeba castellanii str. Neff	14922127
ACA1_024430	mRNA	ACA1_024430	NW_004457589.1	25004	25966	D	ACA1_024430	join(<25004..25223,25298..25431,25530..25629,25703..25766,25843..>25966)	Acanthamoeba castellanii str. Neff	14922128
ACA1_355230	mRNA	ACA1_355230	NW_004457588.1	120	1045	D	ACA1_355230	join(<120..456,573..715,811..894,971..>1045)	Acanthamoeba castellanii str. Neff	14922122
ACA1_355240	mRNA	ACA1_355240	NW_004457588.1	2758	5428	R	ACA1_355240	complement(join(<2758..2811,2887..3024,3117..3269,4597..4709,4812..5003,5095..5149,5208..5298,5379..>5428))	Acanthamoeba castellanii str. Neff	14922113
ACA1_355350	mRNA	ACA1_355350	NW_004457588.1	5635	6884	D	ACA1_355350	join(<5635..5666,5734..5816,5921..5965,6055..6129,6264..6504,6581..6694,6767..>6884)	Acanthamoeba castellanii str. Neff	14922114
ACA1_355360	mRNA	ACA1_355360	NW_004457588.1	6975	9543	R	ACA1_355360	complement(join(<6975..7141,7269..7379,7508..7647,7768..7910,7983..8039,8175..8300,8409..8570,8656..8717,8805..8886,8986..9088,9165..9225,9399..>9543))	Acanthamoeba castellanii str. Neff	14922115
ACA1_355470	mRNA	ACA1_355470	NW_004457588.1	10604	12261	R	ACA1_355470	complement(join(<10604..10770,10913..10997,11554..11748,11829..11974,12087..12170,12255..>12261))	Acanthamoeba castellanii str. Neff	14922119
ACA1_355590	mRNA	ACA1_355590	NW_004457588.1	14792	16168	R	ACA1_355590	complement(join(<14792..15072,15132..15290,15351..15513,15588..15715,15785..15884,15947..>16168))	Acanthamoeba castellanii str. Neff	14922105
ACA1_355610	mRNA	ACA1_355610	NW_004457588.1	18004	19086	R	ACA1_355610	complement(join(<18004..18069,18177..18309,18424..18499,18634..18712,18795..18973,19071..>19086))	Acanthamoeba castellanii str. Neff	14922118
ACA1_355720	mRNA	ACA1_355720	NW_004457588.1	22981	24556	R	ACA1_355720	complement(join(<22981..23524,23685..24160,24248..24396,24417..>24556))	Acanthamoeba castellanii str. Neff	14922120
ACA1_355730	mRNA	ACA1_355730	NW_004457588.1	25343	26558	D	ACA1_355730	join(<25343..25389,25631..25968,26049..26122,26282..26344,26358..>26558)	Acanthamoeba castellanii str. Neff	14922109
ACA1_355740	mRNA	ACA1_355740	NW_004457588.1	26746	27066	R	ACA1_355740	complement(join(<26746..26823,26907..26991,27056..>27066))	Acanthamoeba castellanii str. Neff	14922107
ACA1_355850	mRNA	ACA1_355850	NW_004457588.1	31538	33446	R	ACA1_355850	complement(join(<31538..31588,31650..31760,31857..31921,32013..32156,32282..32484,32572..32723,32819..32913,33005..33109,33204..33248,33323..>33446))	Acanthamoeba castellanii str. Neff	14922110
ACA1_355860	mRNA	ACA1_355860	NW_004457588.1	34153	36886	D	ACA1_355860	join(<34153..34277,34427..34574,34652..34788,34887..34984,35059..35203,35280..35421,35495..35624,35760..35857,35936..36084,36169..36297,36391..>36886)	Acanthamoeba castellanii str. Neff	14922112
ACA1_355970	mRNA	ACA1_355970	NW_004457588.1	37761	38826	D	ACA1_355970	join(<37761..37856,37934..38028,38135..38316,38408..38573,38676..>38826)	Acanthamoeba castellanii str. Neff	14922106
ACA1_355980	mRNA	ACA1_355980	NW_004457588.1	39316	41488	D	ACA1_355980	join(<39316..39636,39780..39846,39940..40121,40255..40807,40922..41075,41176..>41488)	Acanthamoeba castellanii str. Neff	14922108
ACA1_355990	mRNA	ACA1_355990	NW_004457588.1	41596	42087	R	ACA1_355990	complement(<41596..>42087)	Acanthamoeba castellanii str. Neff	14922116
ACA1_356000	mRNA	ACA1_356000	NW_004457588.1	42321	43588	R	ACA1_356000	complement(join(<42321..43345,43438..>43588))	Acanthamoeba castellanii str. Neff	14922117
ACA1_277120	mRNA	ACA1_277120	NW_004457586.1	21	504	D	ACA1_277120	join(<21..214,423..>504)	Acanthamoeba castellanii str. Neff	14922104
ACA1_277230	mRNA	ACA1_277230	NW_004457586.1	1102	1631	R	ACA1_277230	complement(join(<1102..1219,1320..1465,1593..>1631))	Acanthamoeba castellanii str. Neff	14921685
ACA1_277340	mRNA	ACA1_277340	NW_004457586.1	3874	4724	R	ACA1_277340	complement(join(<3874..3945,4019..4249,4322..4453,4479..4589,4656..>4724))	Acanthamoeba castellanii str. Neff	14921686
ACA1_277350	mRNA	ACA1_277350	NW_004457586.1	5693	11720	R	ACA1_277350	complement(join(<5693..6190,6277..6489,6551..6736,6840..7042,7122..7308,7409..7545,7668..8040,8134..8274,8358..8765,8858..9376,9466..9822,10032..10238,10337..10535,10677..10808,10896..11071,11158..11277,11356..11433,11535..>11720))	Acanthamoeba castellanii str. Neff	14921687
ACA1_277360	mRNA	ACA1_277360	NW_004457586.1	12360	13049	R	ACA1_277360	complement(join(<12360..12379,12549..12616,12742..>13049))	Acanthamoeba castellanii str. Neff	14921688
ACA1_277370	mRNA	ACA1_277370	NW_004457586.1	13198	17450	R	ACA1_277370	complement(join(<13198..14487,14553..14652,14755..14843,14913..15034,15121..15314,15400..15599,15680..15729,15820..15968,16076..16334,16410..16528,16626..16708,16823..16952,17335..>17450))	Acanthamoeba castellanii str. Neff	14921689
ACA1_277380	mRNA	ACA1_277380	NW_004457586.1	18342	19986	R	ACA1_277380	complement(join(<18342..18552,18637..18725,18777..18901,18971..19059,19143..19256,19338..19431,19514..19622,19705..19754,19848..>19986))	Acanthamoeba castellanii str. Neff	14921690
ACA1_277390	mRNA	ACA1_277390	NW_004457586.1	20139	21130	R	ACA1_277390	complement(join(<20139..20177,20210..20278,20373..20576,20648..20780,20853..>21130))	Acanthamoeba castellanii str. Neff	14921691
ACA1_277400	mRNA	ACA1_277400	NW_004457586.1	21329	25433	R	ACA1_277400	complement(join(<21329..22393,22467..22563,22665..22863,22949..23028,23140..23241,23310..23512,23594..23643,23729..23877,23960..24741,24845..24977,25216..>25433))	Acanthamoeba castellanii str. Neff	14921692
ACA1_277410	mRNA	ACA1_277410	NW_004457586.1	26884	28690	R	ACA1_277410	complement(join(<26884..27068,27169..27471,27545..27731,27809..28007,28097..28182,28265..28336,28410..28521,28587..>28690))	Acanthamoeba castellanii str. Neff	14921693
ACA1_277420	mRNA	ACA1_277420	NW_004457586.1	29124	29786	R	ACA1_277420	complement(join(<29124..29319,29386..29531,29595..>29786))	Acanthamoeba castellanii str. Neff	14921694
ACA1_277430	mRNA	ACA1_277430	NW_004457586.1	29888	30565	D	ACA1_277430	join(<29888..30167,30210..30275,30360..>30565)	Acanthamoeba castellanii str. Neff	14921695
ACA1_277440	mRNA	ACA1_277440	NW_004457586.1	30673	37796	R	ACA1_277440	complement(join(<30673..30804,30921..31027,31116..31313,31384..31466,31589..31682,31758..31967,32081..32185,32297..32361,32452..32539,32625..32715,32829..32905,33041..33184,33294..33444,33567..33681,33829..33960,34066..34183,34305..34357,34518..35005,35076..35155,35249..35318,35484..35579,35691..35908,35984..36080,36202..36264,36371..36535,36614..36693,36762..36893,36997..37157,37235..37273,37372..>37796))	Acanthamoeba castellanii str. Neff	14921696
ACA1_277460	mRNA	ACA1_277460	NW_004457586.1	47857	54468	D	ACA1_277460	join(<47857..48056,48455..48570,48592..48912,48994..49191,49258..49410,49547..49566,49689..49799,49865..49946,50038..50204,50285..50322,50413..50512,50593..50711,50782..50923,50993..51077,51177..51267,51369..51555,51624..51760,51840..52026,52124..52213,52290..52490,52555..52620,52685..52757,52867..52986,53078..53142,53216..53692,53775..54066,54142..54263,54397..>54468)	Acanthamoeba castellanii str. Neff	14921698
ACA1_277470	mRNA	ACA1_277470	NW_004457586.1	54746	58316	D	ACA1_277470	join(<54746..54762,54865..55026,55285..55327,55428..55539,55629..55705,55796..55872,56035..56200,56282..56344,56444..56527,56621..56767,56849..56959,57107..57250,57323..57367,57473..57560,57627..57687,57772..57868,57945..58049,58112..58176,58256..>58316)	Acanthamoeba castellanii str. Neff	14921699
ACA1_277480	mRNA	ACA1_277480	NW_004457586.1	58431	62070	R	ACA1_277480	complement(join(<58431..58599,58638..58717,58890..58982,59069..59173,59224..59281,59373..59446,59558..59640,59741..59867,59967..60047,60135..60248,60335..60417,60509..60614,60722..60790,60874..60969,61083..61160,61235..61383,61452..61520,62019..>62070))	Acanthamoeba castellanii str. Neff	14921700
ACA1_277490	mRNA	ACA1_277490	NW_004457586.1	63163	63684	R	ACA1_277490	complement(join(<63163..63215,63239..63410,63459..63580,63633..>63684))	Acanthamoeba castellanii str. Neff	14921701
ACA1_277500	mRNA	ACA1_277500	NW_004457586.1	64284	66087	R	ACA1_277500	complement(join(<64284..64294,64382..64536,64599..64723,64813..64999,65081..65178,65250..65335,65392..65513,65586..65650,65715..65807,66052..>66087))	Acanthamoeba castellanii str. Neff	14921702
ACA1_277510	mRNA	ACA1_277510	NW_004457586.1	66244	66761	R	ACA1_277510	complement(join(<66244..66394,66431..66470,66575..>66761))	Acanthamoeba castellanii str. Neff	14921703
ACA1_277520	mRNA	ACA1_277520	NW_004457586.1	67146	68824	D	ACA1_277520	join(<67146..67383,67482..67790,67877..67997,68083..68154,68220..68316,68443..68620,68694..>68824)	Acanthamoeba castellanii str. Neff	14921704
ACA1_277530	mRNA	ACA1_277530	NW_004457586.1	68945	70601	D	ACA1_277530	join(<68945..69281,69370..69450,69550..69685,69849..69864,69992..70109,70217..70479,70527..>70601)	Acanthamoeba castellanii str. Neff	14921705
ACA1_277540	mRNA	ACA1_277540	NW_004457586.1	70966	72376	D	ACA1_277540	join(<70966..71589,71685..71759,71828..71911,71980..72071,72136..>72376)	Acanthamoeba castellanii str. Neff	14921706
ACA1_277550	mRNA	ACA1_277550	NW_004457586.1	72694	73883	D	ACA1_277550	join(<72694..72789,72894..73124,73210..73371,73458..73547,73644..>73883)	Acanthamoeba castellanii str. Neff	14921707
ACA1_277560	mRNA	ACA1_277560	NW_004457586.1	74069	76498	R	ACA1_277560	complement(join(<74069..74127,74189..74362,74441..74553,74615..74736,74869..74974,75067..75156,75383..75471,75517..75585,75712..75786,75883..75977,76070..76181,76195..76237,76292..76332,76406..>76498))	Acanthamoeba castellanii str. Neff	14921708
ACA1_277570	mRNA	ACA1_277570	NW_004457586.1	79107	79623	D	ACA1_277570	join(<79107..79451,79522..>79623)	Acanthamoeba castellanii str. Neff	14921709
ACA1_277580	mRNA	ACA1_277580	NW_004457586.1	80006	81130	D	ACA1_277580	<80006..>81130	Acanthamoeba castellanii str. Neff	14921710
ACA1_277590	mRNA	ACA1_277590	NW_004457586.1	81601	83350	R	ACA1_277590	complement(join(<81601..81704,81779..81888,82250..82307,82378..82511,82639..82748,82830..82927,83027..83167,83266..>83350))	Acanthamoeba castellanii str. Neff	14921711
ACA1_277700	mRNA	ACA1_277700	NW_004457586.1	83590	85571	R	ACA1_277700	complement(join(<83590..83684,83796..83857,83922..83998,84090..84170,84246..84356,84424..84546,84672..84834,84922..85015,85171..85300,85396..85463,85538..>85571))	Acanthamoeba castellanii str. Neff	14921712
ACA1_277710	mRNA	ACA1_277710	NW_004457586.1	85734	86459	D	ACA1_277710	join(<85734..85794,85862..85942,86013..86134,86232..>86459)	Acanthamoeba castellanii str. Neff	14921713
ACA1_277720	mRNA	ACA1_277720	NW_004457586.1	86726	88351	D	ACA1_277720	join(<86726..86962,87048..87116,87130..87286,87351..87495,87578..87697,87768..87876,87948..88016,88095..88177,88255..>88351)	Acanthamoeba castellanii str. Neff	14922103
ACA1_277730	mRNA	ACA1_277730	NW_004457586.1	88545	89716	D	ACA1_277730	join(<88545..88607,88754..88789,88853..89029,89104..89232,89345..89431,89501..89591,89673..>89716)	Acanthamoeba castellanii str. Neff	14921714
ACA1_277740	mRNA	ACA1_277740	NW_004457586.1	90072	91341	D	ACA1_277740	join(<90072..90311,90401..90567,90639..90718,90791..90848,90918..90986,91176..>91341)	Acanthamoeba castellanii str. Neff	14921715
ACA1_277750	mRNA	ACA1_277750	NW_004457586.1	91746	92447	R	ACA1_277750	complement(join(<91746..92166,92254..>92447))	Acanthamoeba castellanii str. Neff	14921716
ACA1_277770	mRNA	ACA1_277770	NW_004457586.1	96028	97791	R	ACA1_277770	complement(join(<96028..96798,97023..97712,97786..>97791))	Acanthamoeba castellanii str. Neff	14921718
ACA1_277780	mRNA	ACA1_277780	NW_004457586.1	98143	100109	D	ACA1_277780	join(<98143..98451,98537..98598,98682..98787,98876..98942,99054..99148,99257..99327,99415..99500,99599..99723,99806..99892,99978..>100109)	Acanthamoeba castellanii str. Neff	14921719
ACA1_277790	mRNA	ACA1_277790	NW_004457586.1	100216	102852	R	ACA1_277790	complement(join(<100216..100319,100398..100522,100647..100707,100792..100963,101042..101131,101230..101337,101433..101518,101607..101710,101794..101852,101939..101990,102108..102207,102300..102377,102472..102565,102649..>102852))	Acanthamoeba castellanii str. Neff	14921720
ACA1_277800	mRNA	ACA1_277800	NW_004457586.1	103002	104987	R	ACA1_277800	complement(join(<103002..103130,103638..104576,104661..104723,104793..>104987))	Acanthamoeba castellanii str. Neff	14921721
ACA1_277810	mRNA	ACA1_277810	NW_004457586.1	105191	107039	R	ACA1_277810	complement(join(<105191..105303,105392..105529,105608..105671,105737..105826,105910..105993,106076..106219,106301..106648,106671..>107039))	Acanthamoeba castellanii str. Neff	14921722
ACA1_277830	mRNA	ACA1_277830	NW_004457586.1	109454	111007	D	ACA1_277830	join(<109454..110192,110263..110447,110529..110622,110706..>111007)	Acanthamoeba castellanii str. Neff	14921724
ACA1_277840	mRNA	ACA1_277840	NW_004457586.1	111760	112782	D	ACA1_277840	<111760..>112782	Acanthamoeba castellanii str. Neff	14921725
ACA1_277850	mRNA	ACA1_277850	NW_004457586.1	112942	114531	R	ACA1_277850	complement(join(<112942..113067,113145..113258,113327..113401,113491..113575,113657..113730,113801..113830,113921..114070,114151..114241,114302..>114531))	Acanthamoeba castellanii str. Neff	14921726
ACA1_277860	mRNA	ACA1_277860	NW_004457586.1	114706	115607	D	ACA1_277860	join(<114706..114763,114824..115140,115209..115418,115482..>115607)	Acanthamoeba castellanii str. Neff	14921727
ACA1_277870	mRNA	ACA1_277870	NW_004457586.1	115793	116252	D	ACA1_277870	join(<115793..116036,116086..>116252)	Acanthamoeba castellanii str. Neff	14921728
ACA1_277880	mRNA	ACA1_277880	NW_004457586.1	117085	120027	D	ACA1_277880	join(<117085..117166,117233..117294,117397..117533,117697..117787,117886..118018,118117..118255,118324..118445,118532..118607,118721..118798,118889..118949,119052..119164,119237..119301,119365..119477,119550..119652,119718..119888,119963..>120027)	Acanthamoeba castellanii str. Neff	14921729
ACA1_277890	mRNA	ACA1_277890	NW_004457586.1	120245	120931	R	ACA1_277890	complement(join(<120245..120343,120409..120501,120585..120709,120790..>120931))	Acanthamoeba castellanii str. Neff	14921730
ACA1_277900	mRNA	ACA1_277900	NW_004457586.1	121042	123097	R	ACA1_277900	complement(join(<121042..121161,121227..121451,121513..121695,121750..121968,122026..122205,122265..122473,122535..122633,122689..122814,122878..>123097))	Acanthamoeba castellanii str. Neff	14921731
ACA1_277910	mRNA	ACA1_277910	NW_004457586.1	123541	126799	R	ACA1_277910	complement(join(<123541..123806,123886..124053,124114..124283,124485..124657,124725..124787,124853..124941,125072..125217,125279..125398,125489..125611,125684..125856,125928..126252,126324..126475,126791..>126799))	Acanthamoeba castellanii str. Neff	14921732
ACA1_277920	mRNA	ACA1_277920	NW_004457586.1	127271	131460	D	ACA1_277920	join(<127271..127484,127615..128218,128408..128434,128526..128708,128775..128877,129037..129155,129260..129353,129446..129595,129680..129938,130028..130233,130342..130496,130519..130622,130683..130705,130746..131142,131210..>131460)	Acanthamoeba castellanii str. Neff	14921733
ACA1_277930	mRNA	ACA1_277930	NW_004457586.1	131509	132092	D	ACA1_277930	join(<131509..131722,131793..131878,131952..>132092)	Acanthamoeba castellanii str. Neff	14921734
ACA1_277940	mRNA	ACA1_277940	NW_004457586.1	132895	134587	R	ACA1_277940	complement(join(<132895..133040,133294..133363,133450..133596,133681..133822,133943..134007,134135..134266,134342..>134587))	Acanthamoeba castellanii str. Neff	14921735
ACA1_277950	mRNA	ACA1_277950	NW_004457586.1	135761	138081	D	ACA1_277950	join(<135761..135933,136045..136138,136288..>138081)	Acanthamoeba castellanii str. Neff	14921736
ACA1_277960	mRNA	ACA1_277960	NW_004457586.1	138942	139313	R	ACA1_277960	complement(<138942..>139313)	Acanthamoeba castellanii str. Neff	14921737
ACA1_277970	mRNA	ACA1_277970	NW_004457586.1	139692	141286	D	ACA1_277970	join(<139692..139905,140038..140194,140295..140488,140590..140670,140732..140800,140880..141022,141125..>141286)	Acanthamoeba castellanii str. Neff	14921738
ACA1_277980	mRNA	ACA1_277980	NW_004457586.1	142351	143483	D	ACA1_277980	join(<142351..142406,142550..142655,142718..142776,143122..143210,143287..>143483)	Acanthamoeba castellanii str. Neff	14921739
ACA1_277990	mRNA	ACA1_277990	NW_004457586.1	144118	149559	D	ACA1_277990	join(<144118..144193,144317..144475,144567..144671,144747..147222,147256..147560,147652..147836,147936..148063,148142..148268,148343..149339,149420..>149559)	Acanthamoeba castellanii str. Neff	14921740
ACA1_278000	mRNA	ACA1_278000	NW_004457586.1	150229	153070	D	ACA1_278000	join(<150229..150306,150327..150416,150524..150636,150705..150809,150894..150988,151088..151208,151323..151378,151515..151583,151675..151758,151868..152023,152124..152412,152488..152696,152795..152872,152958..>153070)	Acanthamoeba castellanii str. Neff	14921741
ACA1_278010	mRNA	ACA1_278010	NW_004457586.1	153822	155856	R	ACA1_278010	complement(join(<153822..154225,154324..154405,154420..154448,154473..154581,154682..154747,154831..155158,155255..155359,155472..155546,155642..>155856))	Acanthamoeba castellanii str. Neff	14921742
ACA1_278020	mRNA	ACA1_278020	NW_004457586.1	156031	158179	R	ACA1_278020	complement(join(<156031..156276,156373..156503,156587..156707,156793..156978,157043..157289,157408..157535,157639..157766,157861..>158179))	Acanthamoeba castellanii str. Neff	14921743
ACA1_278030	mRNA	ACA1_278030	NW_004457586.1	158328	160651	D	ACA1_278030	join(<158328..158381,158458..158627,158743..158880,158975..159109,159212..159359,159420..159633,159718..159933,160063..160103,160211..160357,160445..>160651)	Acanthamoeba castellanii str. Neff	14921744
ACA1_278040	mRNA	ACA1_278040	NW_004457586.1	160749	162271	R	ACA1_278040	complement(join(<160749..160899,160968..161108,161195..161346,161473..161920,162006..>162271))	Acanthamoeba castellanii str. Neff	14921745
ACA1_278050	mRNA	ACA1_278050	NW_004457586.1	162326	164161	R	ACA1_278050	complement(join(<162326..162579,162660..162716,162994..>164161))	Acanthamoeba castellanii str. Neff	14921746
ACA1_278060	mRNA	ACA1_278060	NW_004457586.1	164541	165186	R	ACA1_278060	complement(join(<164541..164731,164791..165022,165106..>165186))	Acanthamoeba castellanii str. Neff	14921747
ACA1_278070	mRNA	ACA1_278070	NW_004457586.1	165579	168230	R	ACA1_278070	complement(join(<165579..165716,165793..165865,165947..165981,166054..166103,166172..166244,166324..166406,166489..166610,166692..166813,166825..166998,167098..167161,167250..167337,167431..167499,167579..167671,167788..167888,167971..168037,168110..>168230))	Acanthamoeba castellanii str. Neff	14921748
ACA1_278080	mRNA	ACA1_278080	NW_004457586.1	168489	169275	R	ACA1_278080	complement(join(<168489..168666,168726..168859,168940..169023,169082..169155,169221..>169275))	Acanthamoeba castellanii str. Neff	14921749
ACA1_278090	mRNA	ACA1_278090	NW_004457586.1	169915	171231	D	ACA1_278090	join(<169915..169954,170031..170152,170236..>171231)	Acanthamoeba castellanii str. Neff	14921750
ACA1_278100	mRNA	ACA1_278100	NW_004457586.1	171468	173542	D	ACA1_278100	join(<171468..171536,171634..171658,171727..171766,171833..171866,172125..172205,172641..172844,172981..173079,173178..173288,173384..>173542)	Acanthamoeba castellanii str. Neff	14921751
ACA1_278110	mRNA	ACA1_278110	NW_004457586.1	173701	174575	D	ACA1_278110	join(<173701..173919,174008..174251,174337..>174575)	Acanthamoeba castellanii str. Neff	14921752
ACA1_278120	mRNA	ACA1_278120	NW_004457586.1	174790	175509	R	ACA1_278120	complement(join(<174790..175241,175344..>175509))	Acanthamoeba castellanii str. Neff	14921753
ACA1_278130	mRNA	ACA1_278130	NW_004457586.1	176136	177280	R	ACA1_278130	complement(join(<176136..176481,176593..177229,177244..>177280))	Acanthamoeba castellanii str. Neff	14921754
ACA1_278140	mRNA	ACA1_278140	NW_004457586.1	178339	179411	R	ACA1_278140	complement(join(<178339..178645,178767..179159,179305..>179411))	Acanthamoeba castellanii str. Neff	14921755
ACA1_278150	mRNA	ACA1_278150	NW_004457586.1	179573	180911	R	ACA1_278150	complement(join(<179573..179697,179793..180073,180151..180194,180261..180355,180463..180508,180569..180648,180722..>180911))	Acanthamoeba castellanii str. Neff	14921756
ACA1_278160	mRNA	ACA1_278160	NW_004457586.1	181322	181629	R	ACA1_278160	complement(join(<181322..181329,181355..181450,181524..>181629))	Acanthamoeba castellanii str. Neff	14921757
ACA1_278170	mRNA	ACA1_278170	NW_004457586.1	182098	185768	R	ACA1_278170	complement(join(<182098..182226,182322..182405,182517..182564,182648..182815,182903..183070,183152..183279,183362..183583,183664..183799,183879..184091,184176..184289,184398..184517,184613..184697,184768..184886,184968..185080,185226..185344,185469..185584,185694..>185768))	Acanthamoeba castellanii str. Neff	14921758
ACA1_278180	mRNA	ACA1_278180	NW_004457586.1	186228	187175	R	ACA1_278180	complement(join(<186228..186509,186658..186839,186939..187032,187104..>187175))	Acanthamoeba castellanii str. Neff	14921759
ACA1_278190	mRNA	ACA1_278190	NW_004457586.1	187279	188688	R	ACA1_278190	complement(join(<187279..187446,187528..187565,187635..187730,187824..187938,188056..188240,188339..188412,188576..>188688))	Acanthamoeba castellanii str. Neff	14921760
ACA1_278200	mRNA	ACA1_278200	NW_004457586.1	189277	191824	D	ACA1_278200	join(<189277..189439,189540..189904,190011..190128,190217..190248,190319..190424,190513..190547,190704..190817,190911..191077,191153..191298,191416..191538,191620..191753,191774..>191824)	Acanthamoeba castellanii str. Neff	14921761
ACA1_278310	mRNA	ACA1_278310	NW_004457586.1	192703	195303	D	ACA1_278310	join(<192703..192808,192890..192975,193182..193322,193403..193465,193718..193801,193866..193961,194036..194090,194172..194246,194472..194617,194860..195123,195220..>195303)	Acanthamoeba castellanii str. Neff	14921762
ACA1_278320	mRNA	ACA1_278320	NW_004457586.1	195466	196491	D	ACA1_278320	join(<195466..195667,195759..195840,195923..195978,196057..196179,196319..>196491)	Acanthamoeba castellanii str. Neff	14921763
ACA1_278330	mRNA	ACA1_278330	NW_004457586.1	196647	198568	D	ACA1_278330	join(<196647..196718,196833..196973,197054..197150,197239..197399,197489..197581,197798..197878,198081..198348,198444..>198568)	Acanthamoeba castellanii str. Neff	14921764
ACA1_278340	mRNA	ACA1_278340	NW_004457586.1	199371	201686	D	ACA1_278340	<199371..>201686	Acanthamoeba castellanii str. Neff	14921765
ACA1_278350	mRNA	ACA1_278350	NW_004457586.1	202226	205159	D	ACA1_278350	join(<202226..203339,203445..>205159)	Acanthamoeba castellanii str. Neff	14921766
ACA1_278460	mRNA	ACA1_278460	NW_004457586.1	205949	207363	D	ACA1_278460	join(<205949..206056,206153..206250,206341..206435,206463..206503,206586..206742,206809..207162,207245..>207363)	Acanthamoeba castellanii str. Neff	14921767
ACA1_278470	mRNA	ACA1_278470	NW_004457586.1	212179	212997	R	ACA1_278470	complement(join(<212179..212655,212875..>212997))	Acanthamoeba castellanii str. Neff	14921768
ACA1_278480	mRNA	ACA1_278480	NW_004457586.1	213340	213590	R	ACA1_278480	complement(join(<213340..213562,213574..>213590))	Acanthamoeba castellanii str. Neff	14921769
ACA1_278590	mRNA	ACA1_278590	NW_004457586.1	219487	219864	D	ACA1_278590	join(<219487..219575,219636..>219864)	Acanthamoeba castellanii str. Neff	14921770
ACA1_278600	mRNA	ACA1_278600	NW_004457586.1	221299	222307	D	ACA1_278600	join(<221299..221400,221500..221587,221662..221716,221812..>222307)	Acanthamoeba castellanii str. Neff	14921771
ACA1_278610	mRNA	ACA1_278610	NW_004457586.1	223679	225063	R	ACA1_278610	complement(join(<223679..223999,224057..224400,224594..224691,224915..>225063))	Acanthamoeba castellanii str. Neff	14921772
ACA1_278620	mRNA	ACA1_278620	NW_004457586.1	226765	227369	R	ACA1_278620	complement(join(<226765..226766,226805..226892,227021..227100,227285..>227369))	Acanthamoeba castellanii str. Neff	14921773
ACA1_278630	mRNA	ACA1_278630	NW_004457586.1	228093	229417	D	ACA1_278630	join(<228093..228843,229009..229150,229255..>229417)	Acanthamoeba castellanii str. Neff	14921774
ACA1_278740	mRNA	ACA1_278740	NW_004457586.1	231923	233308	R	ACA1_278740	complement(join(<231923..231928,231974..232210,232369..232505,232634..232787,232882..233004,233084..>233308))	Acanthamoeba castellanii str. Neff	14921775
ACA1_278750	mRNA	ACA1_278750	NW_004457586.1	234204	237671	D	ACA1_278750	join(<234204..235042,235144..235373,235459..235512,235601..235742,235847..235977,236057..236368,236476..236600,236683..236809,236901..237002,237093..237189,237265..237337,237414..>237671)	Acanthamoeba castellanii str. Neff	14921776
ACA1_278760	mRNA	ACA1_278760	NW_004457586.1	237854	238597	D	ACA1_278760	join(<237854..237901,238001..238031,238116..238185,238266..238445,238552..>238597)	Acanthamoeba castellanii str. Neff	14921777
ACA1_278770	mRNA	ACA1_278770	NW_004457586.1	238976	240390	D	ACA1_278770	join(<238976..239688,239730..>240390)	Acanthamoeba castellanii str. Neff	14921778
ACA1_278780	mRNA	ACA1_278780	NW_004457586.1	240575	241801	R	ACA1_278780	complement(join(<240575..240901,241017..241609,241729..>241801))	Acanthamoeba castellanii str. Neff	14921779
ACA1_278790	mRNA	ACA1_278790	NW_004457586.1	242241	242798	R	ACA1_278790	complement(join(<242241..242350,242433..242508,242580..>242798))	Acanthamoeba castellanii str. Neff	14921780
ACA1_278800	mRNA	ACA1_278800	NW_004457586.1	242897	243552	D	ACA1_278800	join(<242897..242961,243064..243083,243207..243281,243432..243492,243522..>243552)	Acanthamoeba castellanii str. Neff	14921781
ACA1_278810	mRNA	ACA1_278810	NW_004457586.1	243852	246539	D	ACA1_278810	join(<243852..244184,244315..244404,244494..244596,244693..244903,245037..245173,245270..245469,245624..245783,245845..246027,246113..246279,246363..>246539)	Acanthamoeba castellanii str. Neff	14921782
ACA1_278820	mRNA	ACA1_278820	NW_004457586.1	246720	250124	R	ACA1_278820	complement(join(<246720..246843,246947..248200,248275..248414,248481..248590,248681..248731,248800..248899,248950..249417,249498..>250124))	Acanthamoeba castellanii str. Neff	14921783
ACA1_278830	mRNA	ACA1_278830	NW_004457586.1	250391	251832	R	ACA1_278830	complement(join(<250391..250770,250875..>251832))	Acanthamoeba castellanii str. Neff	14921784
ACA1_278840	mRNA	ACA1_278840	NW_004457586.1	252664	253389	D	ACA1_278840	join(<252664..252796,252850..252933,253019..>253389)	Acanthamoeba castellanii str. Neff	14921785
ACA1_278850	mRNA	ACA1_278850	NW_004457586.1	254017	256793	D	ACA1_278850	join(<254017..254171,254270..254397,254478..254520,254848..254932,254949..255111,255234..256102,256299..>256793)	Acanthamoeba castellanii str. Neff	14921786
ACA1_278860	mRNA	ACA1_278860	NW_004457586.1	256918	260229	R	ACA1_278860	complement(join(<256918..256923,256971..257242,257338..257439,257511..257634,257736..257879,257957..258110,258183..258272,258371..258513,258625..258716,258801..258917,258999..259142,259223..259282,259394..259507,259590..259684,259751..259903,259970..260032,260195..>260229))	Acanthamoeba castellanii str. Neff	14921787
ACA1_278870	mRNA	ACA1_278870	NW_004457586.1	260695	263078	R	ACA1_278870	complement(join(<260695..262515,262530..>263078))	Acanthamoeba castellanii str. Neff	14921788
ACA1_278880	mRNA	ACA1_278880	NW_004457586.1	263785	269406	D	ACA1_278880	join(<263785..264234,264304..264608,264689..265304,265420..265620,265697..265756,265837..265950,266051..266149,266222..266613,266680..266753,266831..267464,267541..267671,267761..267913,267989..268526,268608..268737,268825..>269406)	Acanthamoeba castellanii str. Neff	14921789
ACA1_278890	mRNA	ACA1_278890	NW_004457586.1	269626	270515	D	ACA1_278890	join(<269626..270235,270322..>270515)	Acanthamoeba castellanii str. Neff	14921790
ACA1_278900	mRNA	ACA1_278900	NW_004457586.1	271102	273447	D	ACA1_278900	join(<271102..271265,271353..271851,271939..272443,272533..272601,272706..272854,272965..273223,273302..>273447)	Acanthamoeba castellanii str. Neff	14921791
ACA1_278910	mRNA	ACA1_278910	NW_004457586.1	273685	274300	R	ACA1_278910	complement(join(<273685..273908,273991..>274300))	Acanthamoeba castellanii str. Neff	14921792
ACA1_278920	mRNA	ACA1_278920	NW_004457586.1	274705	277466	D	ACA1_278920	join(<274705..275045,275138..275183,275246..275437,275475..275609,275692..275824,275941..276046,276121..276275,276369..276667,276758..276854,276940..277048,277139..>277466)	Acanthamoeba castellanii str. Neff	14921793
ACA1_278930	mRNA	ACA1_278930	NW_004457586.1	277544	280429	D	ACA1_278930	join(<277544..277799,277901..277951,278025..278103,278207..278384,278470..279498,279633..279824,279899..280083,280154..280201,280312..>280429)	Acanthamoeba castellanii str. Neff	14921794
ACA1_278940	mRNA	ACA1_278940	NW_004457586.1	280801	281829	D	ACA1_278940	join(<280801..280965,281055..281257,281326..281456,281486..>281829)	Acanthamoeba castellanii str. Neff	14921795
ACA1_278950	mRNA	ACA1_278950	NW_004457586.1	282089	284344	R	ACA1_278950	complement(join(<282089..282247,282331..282487,282551..282687,282783..282868,282884..282927,282951..283194,283282..283375,283522..283646,283773..284076,284144..>284344))	Acanthamoeba castellanii str. Neff	14921796
ACA1_278960	mRNA	ACA1_278960	NW_004457586.1	284776	286929	R	ACA1_278960	complement(join(<284776..284866,284971..285134,285220..285285,285381..285492,285578..285690,285778..285834,285903..285993,286081..286189,286229..286355,286435..>286929))	Acanthamoeba castellanii str. Neff	14921797
ACA1_278970	mRNA	ACA1_278970	NW_004457586.1	287344	287961	R	ACA1_278970	complement(<287344..>287961)	Acanthamoeba castellanii str. Neff	14921798
ACA1_278980	mRNA	ACA1_278980	NW_004457586.1	288451	290406	R	ACA1_278980	complement(join(<288451..288827,288907..288992,289070..289208,289293..289392,289485..289584,289661..289721,289824..290219,290304..>290406))	Acanthamoeba castellanii str. Neff	14921799
ACA1_278990	mRNA	ACA1_278990	NW_004457586.1	290691	291366	D	ACA1_278990	join(<290691..290850,290981..>291366)	Acanthamoeba castellanii str. Neff	14921800
ACA1_279000	mRNA	ACA1_279000	NW_004457586.1	291527	292478	D	ACA1_279000	join(<291527..291746,291833..291876,291947..292041,292123..292159,292252..292333,292420..>292478)	Acanthamoeba castellanii str. Neff	14921801
ACA1_279010	mRNA	ACA1_279010	NW_004457586.1	292881	293624	D	ACA1_279010	join(<292881..292998,293084..293222,293303..293415,293482..>293624)	Acanthamoeba castellanii str. Neff	14921802
ACA1_279020	mRNA	ACA1_279020	NW_004457586.1	293733	296507	R	ACA1_279020	complement(join(<293733..294363,294450..294580,294655..295026,295130..295271,295363..295546,295635..295722,295809..295866,295950..296031,296131..296367,296456..>296507))	Acanthamoeba castellanii str. Neff	14921803
ACA1_279030	mRNA	ACA1_279030	NW_004457586.1	296797	299925	R	ACA1_279030	complement(join(<296797..296955,297041..297205,297298..297440,297521..297697,297773..297930,298004..298157,298229..298363,298441..298645,298719..298883,298958..298985,299073..299245,299325..299510,299582..299670,299838..>299925))	Acanthamoeba castellanii str. Neff	14921804
ACA1_279040	mRNA	ACA1_279040	NW_004457586.1	300373	301054	D	ACA1_279040	join(<300373..300539,300608..300747,300808..300879,300945..>301054)	Acanthamoeba castellanii str. Neff	14921805
ACA1_279050	mRNA	ACA1_279050	NW_004457586.1	301301	302131	R	ACA1_279050	complement(join(<301301..301443,301574..301937,302030..>302131))	Acanthamoeba castellanii str. Neff	14921806
ACA1_279070	mRNA	ACA1_279070	NW_004457586.1	320454	322836	D	ACA1_279070	join(<320454..320838,320902..321074,321180..321347,321482..321686,321792..321936,322029..322252,322354..322452,322540..322638,322730..>322836)	Acanthamoeba castellanii str. Neff	14921808
ACA1_279080	mRNA	ACA1_279080	NW_004457586.1	322854	323271	D	ACA1_279080	join(<322854..323033,323095..>323271)	Acanthamoeba castellanii str. Neff	14921809
ACA1_279090	mRNA	ACA1_279090	NW_004457586.1	323371	325024	R	ACA1_279090	complement(join(<323371..323425,323514..323588,323674..323782,323864..323936,324006..324065,324130..324284,324356..324466,324531..324610,324675..>325024))	Acanthamoeba castellanii str. Neff	14921810
ACA1_279200	mRNA	ACA1_279200	NW_004457586.1	325847	331017	R	ACA1_279200	complement(join(<325847..325910,326022..326158,326252..326347,326476..326607,326681..326809,326910..329301,329360..329694,329823..330246,330343..330469,330777..330856,330980..>331017))	Acanthamoeba castellanii str. Neff	14921811
ACA1_279210	mRNA	ACA1_279210	NW_004457586.1	331210	332512	D	ACA1_279210	join(<331210..331677,331759..331822,331880..332061,332135..332378,332460..>332512)	Acanthamoeba castellanii str. Neff	14921812
ACA1_279220	mRNA	ACA1_279220	NW_004457586.1	332698	334950	R	ACA1_279220	complement(join(<332698..332861,332932..333039,333180..333421,333507..333634,333741..333825,333938..334149,334236..334316,334375..334479,334592..334707,334779..334843,334937..>334950))	Acanthamoeba castellanii str. Neff	14921813
ACA1_279230	mRNA	ACA1_279230	NW_004457586.1	335342	337019	D	ACA1_279230	join(<335342..335389,335466..335735,335809..335857,336050..336126,336212..336320,336388..336506,336617..336718,336813..>337019)	Acanthamoeba castellanii str. Neff	14921814
ACA1_279240	mRNA	ACA1_279240	NW_004457586.1	337482	339668	R	ACA1_279240	complement(join(<337482..337703,337751..337911,337989..338070,338281..338348,338414..338567,338654..338762,338859..338986,339002..339056,339132..339239,339331..339511,339650..>339668))	Acanthamoeba castellanii str. Neff	14921815
ACA1_279250	mRNA	ACA1_279250	NW_004457586.1	339977	341124	D	ACA1_279250	join(<339977..340842,340857..>341124)	Acanthamoeba castellanii str. Neff	14921816
ACA1_279260	mRNA	ACA1_279260	NW_004457586.1	341456	343964	R	ACA1_279260	complement(join(<341456..341660,341747..341866,341913..341919,342074..342338,342424..342513,342646..343262,343323..343536,343600..343688,343772..>343964))	Acanthamoeba castellanii str. Neff	14921817
ACA1_279270	mRNA	ACA1_279270	NW_004457586.1	344525	345399	D	ACA1_279270	join(<344525..344789,344861..>345399)	Acanthamoeba castellanii str. Neff	14921818
ACA1_279280	mRNA	ACA1_279280	NW_004457586.1	345516	347513	R	ACA1_279280	complement(join(<345516..345695,345772..345858,345922..346015,346087..346251,346319..346446,346540..346662,346743..346980,347099..347315,347462..>347513))	Acanthamoeba castellanii str. Neff	14921819
ACA1_279290	mRNA	ACA1_279290	NW_004457586.1	348048	350047	D	ACA1_279290	join(<348048..348627,348698..348868,348941..349070,349133..349321,349390..349468,349547..>350047)	Acanthamoeba castellanii str. Neff	14921820
ACA1_279300	mRNA	ACA1_279300	NW_004457586.1	350600	350962	D	ACA1_279300	<350600..>350962	Acanthamoeba castellanii str. Neff	14921821
ACA1_279310	mRNA	ACA1_279310	NW_004457586.1	351388	354618	D	ACA1_279310	join(<351388..351508,351758..351896,351976..352092,352160..352376,352457..352867,352938..353075,353163..353861,354002..354106,354210..354298,354353..354462,354536..>354618)	Acanthamoeba castellanii str. Neff	14921822
ACA1_279320	mRNA	ACA1_279320	NW_004457586.1	355077	359351	D	ACA1_279320	join(<355077..355175,355206..355406,355571..355718,355796..355963,356065..356135,356247..356366,356444..356611,356709..356841,356904..357017,357128..357334,357421..357502,357597..357695,357800..357896,357979..358147,358287..358396,358482..358547,358654..358842,358916..359097,359201..>359351)	Acanthamoeba castellanii str. Neff	14921823
ACA1_279330	mRNA	ACA1_279330	NW_004457586.1	359630	366757	R	ACA1_279330	complement(join(<359630..360025,360122..360327,360421..360903,361015..361277,361359..362103,362220..362367,362476..362537,362629..362725,362796..362933,363000..363259,363395..363645,363722..363869,363963..364098,364190..364330,364421..364589,364668..364746,364818..365167,365254..365567,365660..365939,366108..366265,366380..366440,366503..366605,366691..>366757))	Acanthamoeba castellanii str. Neff	14921824
ACA1_279340	mRNA	ACA1_279340	NW_004457586.1	366924	369545	R	ACA1_279340	complement(join(<366924..367223,367301..367498,367586..367738,367822..368055,368133..368204,368276..368352,368405..368465,368551..368646,368717..369160,369242..369346,369402..>369545))	Acanthamoeba castellanii str. Neff	14921825
ACA1_279350	mRNA	ACA1_279350	NW_004457586.1	369932	370433	R	ACA1_279350	complement(join(<369932..370028,370092..370278,370349..>370433))	Acanthamoeba castellanii str. Neff	14921826
ACA1_279360	mRNA	ACA1_279360	NW_004457586.1	370914	372194	R	ACA1_279360	complement(join(<370914..371146,371211..371344,371442..371531,371614..371693,371766..>372194))	Acanthamoeba castellanii str. Neff	14921827
ACA1_279370	mRNA	ACA1_279370	NW_004457586.1	372447	373854	D	ACA1_279370	join(<372447..372567,372704..372730,372758..373497,373609..>373854)	Acanthamoeba castellanii str. Neff	14921828
ACA1_279380	mRNA	ACA1_279380	NW_004457586.1	374187	374786	D	ACA1_279380	join(<374187..374375,374433..374543,374631..>374786)	Acanthamoeba castellanii str. Neff	14921829
ACA1_279390	mRNA	ACA1_279390	NW_004457586.1	374881	377787	R	ACA1_279390	complement(join(<374881..375470,375604..375717,375829..375918,376011..376095,376163..376282,376386..377217,377379..377505,377568..>377787))	Acanthamoeba castellanii str. Neff	14921830
ACA1_279400	mRNA	ACA1_279400	NW_004457586.1	377846	379355	R	ACA1_279400	complement(join(<377846..378033,378130..378260,378329..378521,378605..378907,378978..379095,379176..379247,379338..>379355))	Acanthamoeba castellanii str. Neff	14921831
ACA1_279410	mRNA	ACA1_279410	NW_004457586.1	379674	380230	D	ACA1_279410	join(<379674..379682,379788..379894,380038..380120,380217..>380230)	Acanthamoeba castellanii str. Neff	14921832
ACA1_279420	mRNA	ACA1_279420	NW_004457586.1	381282	382630	D	ACA1_279420	join(<381282..381677,381803..381866,381973..382284,382423..382489,382567..>382630)	Acanthamoeba castellanii str. Neff	14921833
ACA1_279430	mRNA	ACA1_279430	NW_004457586.1	382782	384187	R	ACA1_279430	complement(join(<382782..382822,382913..383099,383233..383343,383435..383589,383716..>384187))	Acanthamoeba castellanii str. Neff	14921834
ACA1_279440	mRNA	ACA1_279440	NW_004457586.1	384345	385440	D	ACA1_279440	join(<384345..384455,384539..385049,385111..385215,385283..>385440)	Acanthamoeba castellanii str. Neff	14921835
ACA1_279450	mRNA	ACA1_279450	NW_004457586.1	385650	387712	D	ACA1_279450	join(<385650..386036,386093..386433,386572..386730,386801..387024,387114..387239,387480..>387712)	Acanthamoeba castellanii str. Neff	14921836
ACA1_279460	mRNA	ACA1_279460	NW_004457586.1	388075	392389	D	ACA1_279460	join(<388075..388212,388309..388476,388554..388671,388787..389003,389086..389410,389528..389596,389699..389766,389841..389980,390051..390134,390257..390456,390568..390736,390821..390963,391141..391461,391582..391680,391756..391842,391924..392022,392096..392230,392309..>392389)	Acanthamoeba castellanii str. Neff	14921837
ACA1_279470	mRNA	ACA1_279470	NW_004457586.1	392603	394363	R	ACA1_279470	complement(<392603..>394363)	Acanthamoeba castellanii str. Neff	14921838
ACA1_279480	mRNA	ACA1_279480	NW_004457586.1	394958	400109	D	ACA1_279480	join(<394958..395109,395189..396428,396498..397462,397547..397772,397850..397946,398038..399689,399774..>400109)	Acanthamoeba castellanii str. Neff	14921839
ACA1_279490	mRNA	ACA1_279490	NW_004457586.1	400222	401322	R	ACA1_279490	complement(join(<400222..400301,400373..400644,400883..400989,401079..401153,401281..>401322))	Acanthamoeba castellanii str. Neff	14921840
ACA1_279500	mRNA	ACA1_279500	NW_004457586.1	401460	404268	R	ACA1_279500	complement(join(<401460..401680,401792..402022,402103..402238,402335..402505,402587..402744,402817..402976,403048..403195,403295..403410,403534..403824,403950..404067,404192..>404268))	Acanthamoeba castellanii str. Neff	14921841
ACA1_279510	mRNA	ACA1_279510	NW_004457586.1	404844	407710	R	ACA1_279510	complement(join(<404844..405192,405315..406047,406164..406305,406383..406747,406823..406971,407057..407205,407296..407521,407607..>407710))	Acanthamoeba castellanii str. Neff	14921842
ACA1_279520	mRNA	ACA1_279520	NW_004457586.1	408011	409137	R	ACA1_279520	complement(join(<408011..408151,408261..408373,408435..408504,408577..408725,408819..>409137))	Acanthamoeba castellanii str. Neff	14921843
ACA1_279530	mRNA	ACA1_279530	NW_004457586.1	409559	410663	D	ACA1_279530	join(<409559..409658,409720..409815,409892..409910,409984..410046,410126..410311,410392..410460,410555..>410663)	Acanthamoeba castellanii str. Neff	14921844
ACA1_279540	mRNA	ACA1_279540	NW_004457586.1	411125	411700	R	ACA1_279540	complement(join(<411125..411303,411374..411554,411638..>411700))	Acanthamoeba castellanii str. Neff	14921845
ACA1_279550	mRNA	ACA1_279550	NW_004457586.1	411835	413562	R	ACA1_279550	complement(join(<411835..411990,412120..412272,412360..412516,412591..412669,412786..412850,412951..413027,413130..413156,413263..>413562))	Acanthamoeba castellanii str. Neff	14921846
ACA1_279560	mRNA	ACA1_279560	NW_004457586.1	413645	415505	R	ACA1_279560	complement(join(<413645..413936,414004..414376,414439..414551,414627..414745,414814..414951,415020..415118,415191..415307,415371..>415505))	Acanthamoeba castellanii str. Neff	14921847
ACA1_279570	mRNA	ACA1_279570	NW_004457586.1	415893	417843	D	ACA1_279570	join(<415893..416051,416119..416173,416234..416343,416423..416486,416548..416623,416705..416945,417006..417259,417336..417529,417602..>417843)	Acanthamoeba castellanii str. Neff	14921848
ACA1_279580	mRNA	ACA1_279580	NW_004457586.1	418211	420021	D	ACA1_279580	join(<418211..418232,418362..418500,418588..418668,418760..418943,419047..419514,419599..419727,419815..>420021)	Acanthamoeba castellanii str. Neff	14921849
ACA1_279590	mRNA	ACA1_279590	NW_004457586.1	420582	421748	R	ACA1_279590	complement(join(<420582..420973,420996..421241,421306..421387,421605..>421748))	Acanthamoeba castellanii str. Neff	14921850
ACA1_279600	mRNA	ACA1_279600	NW_004457586.1	422989	424395	R	ACA1_279600	complement(join(<422989..423552,423656..423937,424042..>424395))	Acanthamoeba castellanii str. Neff	14921851
ACA1_279610	mRNA	ACA1_279610	NW_004457586.1	425425	425861	D	ACA1_279610	join(<425425..425491,425542..>425861)	Acanthamoeba castellanii str. Neff	14921852
ACA1_279620	mRNA	ACA1_279620	NW_004457586.1	425967	427141	D	ACA1_279620	join(<425967..426298,426459..426594,426681..426807,426879..>427141)	Acanthamoeba castellanii str. Neff	14921853
ACA1_279630	mRNA	ACA1_279630	NW_004457586.1	427260	432536	D	ACA1_279630	join(<427260..427436,427552..427673,427784..428177,428264..428380,428475..428602,428714..428903,428984..429203,429282..429413,429626..429810,429893..429979,430070..430577,430681..430826,430914..430998,431079..431170,431288..431416,431502..431834,431901..432005,432069..432156,432294..432362,432493..>432536)	Acanthamoeba castellanii str. Neff	14921854
ACA1_279740	mRNA	ACA1_279740	NW_004457586.1	433464	435002	D	ACA1_279740	join(<433464..433643,433736..433856,433935..434768,434851..>435002)	Acanthamoeba castellanii str. Neff	14921855
ACA1_279750	mRNA	ACA1_279750	NW_004457586.1	435231	438880	R	ACA1_279750	complement(join(<435231..435916,436020..436306,436368..436441,436527..437399,437482..438182,438281..438316,438411..438576,438649..438805,438876..>438880))	Acanthamoeba castellanii str. Neff	14921856
ACA1_279760	mRNA	ACA1_279760	NW_004457586.1	439617	442047	R	ACA1_279760	complement(join(<439617..439683,439802..439995,440073..440337,440411..441821,441903..>442047))	Acanthamoeba castellanii str. Neff	14921857
ACA1_279770	mRNA	ACA1_279770	NW_004457586.1	442154	444573	R	ACA1_279770	complement(join(<442154..442227,442262..442274,442319..442711,442797..442870,443193..443910,443996..444147,444242..444416,444487..>444573))	Acanthamoeba castellanii str. Neff	14921858
ACA1_279780	mRNA	ACA1_279780	NW_004457586.1	444753	445004	D	ACA1_279780	<444753..>445004	Acanthamoeba castellanii str. Neff	14921859
ACA1_279790	mRNA	ACA1_279790	NW_004457586.1	445607	446896	R	ACA1_279790	complement(join(<445607..445819,445900..446071,446135..446246,446313..446466,446533..446678,446767..>446896))	Acanthamoeba castellanii str. Neff	14921860
ACA1_279800	mRNA	ACA1_279800	NW_004457586.1	447078	453789	D	ACA1_279800	join(<447078..447484,447558..447641,447738..447961,448202..448375,448468..448527,448612..448747,448931..449051,449077..449368,449454..449696,449951..450041,450126..450280,450366..450441,450514..450652,450731..450995,451067..451198,451264..451376,451412..452257,452307..452504,452518..453231,453305..453395,453413..>453789)	Acanthamoeba castellanii str. Neff	14921861
ACA1_280010	mRNA	ACA1_280010	NW_004457586.1	453889	455817	D	ACA1_280010	join(<453889..454381,454482..454596,454697..454844,454936..>455817)	Acanthamoeba castellanii str. Neff	14921862
ACA1_280020	mRNA	ACA1_280020	NW_004457586.1	455973	457789	D	ACA1_280020	join(<455973..456530,456632..456719,456805..456875,456961..457213,457315..457597,457651..>457789)	Acanthamoeba castellanii str. Neff	14921863
ACA1_280030	mRNA	ACA1_280030	NW_004457586.1	457974	459378	D	ACA1_280030	join(<457974..458207,458294..458363,458441..458559,458637..458927,459020..459234,459324..459334,459347..>459378)	Acanthamoeba castellanii str. Neff	14921864
ACA1_280140	mRNA	ACA1_280140	NW_004457586.1	462347	462957	D	ACA1_280140	join(<462347..462493,462562..462692,462772..>462957)	Acanthamoeba castellanii str. Neff	14921865
ACA1_280260	mRNA	ACA1_280260	NW_004457586.1	467333	467956	R	ACA1_280260	complement(join(<467333..467427,467506..467578,467702..>467956))	Acanthamoeba castellanii str. Neff	14921867
ACA1_280270	mRNA	ACA1_280270	NW_004457586.1	468039	470046	R	ACA1_280270	complement(join(<468039..468102,468186..468258,468369..468623,468720..468906,468979..469058,469135..469320,469413..469489,469525..469687,469818..>470046))	Acanthamoeba castellanii str. Neff	14921868
ACA1_280280	mRNA	ACA1_280280	NW_004457586.1	470210	471734	R	ACA1_280280	complement(join(<470210..470919,471031..471187,471276..471334,471407..471538,471626..>471734))	Acanthamoeba castellanii str. Neff	14921869
ACA1_280290	mRNA	ACA1_280290	NW_004457586.1	471900	481627	R	ACA1_280290	complement(join(<471900..472060,472137..472227,472307..472918,472943..473209,473287..473570,473669..474886,474994..475087,475182..475422,475510..475844,475940..476125,476207..476340,476427..476549,476624..476797,476902..477075,477167..477288,477310..477365,477461..477547,477659..477978,478051..478149,478242..478434,478547..478704,478785..478908,479001..479117,479189..479350,479434..479580,479669..479962,480035..480199,480320..480575,480655..480977,481208..>481627))	Acanthamoeba castellanii str. Neff	14921870
ACA1_280300	mRNA	ACA1_280300	NW_004457586.1	482171	484391	R	ACA1_280300	complement(join(<482171..482431,482563..482696,482782..482899,482999..483134,483444..483766,483972..>484391))	Acanthamoeba castellanii str. Neff	14921871
ACA1_280510	mRNA	ACA1_280510	NW_004457586.1	485445	487306	R	ACA1_280510	complement(join(<485445..485496,485601..485739,485846..485972,486047..486189,486326..486423,486518..486570,486744..486904,487003..>487306))	Acanthamoeba castellanii str. Neff	14921872
ACA1_280520	mRNA	ACA1_280520	NW_004457586.1	487398	489378	R	ACA1_280520	complement(join(<487398..487466,487500..487728,487797..488002,488021..488154,488232..488444,488520..488734,488809..488936,489012..489151,489228..>489378))	Acanthamoeba castellanii str. Neff	14921873
ACA1_280530	mRNA	ACA1_280530	NW_004457586.1	489551	490353	R	ACA1_280530	complement(join(<489551..489644,489726..489996,490019..490147,490221..>490353))	Acanthamoeba castellanii str. Neff	14921874
ACA1_280540	mRNA	ACA1_280540	NW_004457586.1	490699	491418	D	ACA1_280540	join(<490699..490736,490846..490981,491076..491177,491263..>491418)	Acanthamoeba castellanii str. Neff	14921875
ACA1_280550	mRNA	ACA1_280550	NW_004457586.1	491494	492578	R	ACA1_280550	complement(join(<491494..491553,491664..491824,491974..492064,492128..492197,492282..492323,492430..>492578))	Acanthamoeba castellanii str. Neff	14921876
ACA1_280570	mRNA	ACA1_280570	NW_004457586.1	497356	501583	D	ACA1_280570	join(<497356..497657,497751..497885,497986..498286,498369..498567,498650..498745,498941..499483,499591..499790,499869..500072,500090..500237,500324..500454,500540..500839,500904..501045,501128..501342,501413..>501583)	Acanthamoeba castellanii str. Neff	14921878
ACA1_280580	mRNA	ACA1_280580	NW_004457586.1	501696	502040	R	ACA1_280580	complement(join(<501696..501822,501895..>502040))	Acanthamoeba castellanii str. Neff	14921879
ACA1_280590	mRNA	ACA1_280590	NW_004457586.1	502345	503173	D	ACA1_280590	join(<502345..502496,502630..>503173)	Acanthamoeba castellanii str. Neff	14921880
ACA1_280600	mRNA	ACA1_280600	NW_004457586.1	503348	504340	D	ACA1_280600	join(<503348..503545,503609..>504340)	Acanthamoeba castellanii str. Neff	14921881
ACA1_280610	mRNA	ACA1_280610	NW_004457586.1	504548	508025	D	ACA1_280610	join(<504548..504770,504882..505215,505230..505378,505472..505620,505721..505838,505912..506654,506768..507195,507283..507473,507562..>508025)	Acanthamoeba castellanii str. Neff	14921882
ACA1_280620	mRNA	ACA1_280620	NW_004457586.1	508105	510515	R	ACA1_280620	complement(join(<508105..508283,508382..508789,509019..509187,509362..509700,509791..509922,509997..510136,510213..510302,510395..>510515))	Acanthamoeba castellanii str. Neff	14921883
ACA1_280630	mRNA	ACA1_280630	NW_004457586.1	510795	513690	R	ACA1_280630	complement(join(<510795..510936,511066..511187,511266..511342,511436..511613,511714..511901,512010..512250,512319..512477,512597..512757,512846..512972,513080..513188,513286..513415,513561..>513690))	Acanthamoeba castellanii str. Neff	14921884
ACA1_280640	mRNA	ACA1_280640	NW_004457586.1	514036	517844	R	ACA1_280640	complement(join(<514036..514154,514265..514475,514577..514741,514834..515142,515227..515384,515457..516161,516261..516361,516439..516533,516629..516815,516932..516999,517085..517192,517323..517493,517584..>517844))	Acanthamoeba castellanii str. Neff	14921885
ACA1_280650	mRNA	ACA1_280650	NW_004457586.1	518236	520430	R	ACA1_280650	complement(join(<518236..518363,518453..518902,518982..519183,519271..519482,519565..519745,519791..520008,520033..520186,520270..520317,520419..>520430))	Acanthamoeba castellanii str. Neff	14921886
ACA1_280660	mRNA	ACA1_280660	NW_004457586.1	520668	521972	D	ACA1_280660	join(<520668..520800,520884..520994,521078..521183,521267..521356,521435..521554,521631..521712,521793..>521972)	Acanthamoeba castellanii str. Neff	14921887
ACA1_280670	mRNA	ACA1_280670	NW_004457586.1	522128	522764	R	ACA1_280670	complement(join(<522128..522327,522440..>522764))	Acanthamoeba castellanii str. Neff	14921888
ACA1_280680	mRNA	ACA1_280680	NW_004457586.1	523230	523916	R	ACA1_280680	complement(join(<523230..523331,523411..523461,523529..523593,523661..523754,523872..>523916))	Acanthamoeba castellanii str. Neff	14921889
ACA1_280690	mRNA	ACA1_280690	NW_004457586.1	524843	526004	D	ACA1_280690	join(<524843..524903,524963..525103,525206..525252,525314..525410,525488..525576,525660..>526004)	Acanthamoeba castellanii str. Neff	14921890
ACA1_280700	mRNA	ACA1_280700	NW_004457586.1	526603	527193	D	ACA1_280700	join(<526603..526776,526881..526971,527066..>527193)	Acanthamoeba castellanii str. Neff	14921891
ACA1_280710	mRNA	ACA1_280710	NW_004457586.1	527358	530233	D	ACA1_280710	join(<527358..527405,527478..527676,527745..527852,527924..529297,529398..>530233)	Acanthamoeba castellanii str. Neff	14921892
ACA1_280720	mRNA	ACA1_280720	NW_004457586.1	530456	530783	D	ACA1_280720	join(<530456..530591,530719..>530783)	Acanthamoeba castellanii str. Neff	14921893
ACA1_280830	mRNA	ACA1_280830	NW_004457586.1	531146	534210	D	ACA1_280830	join(<531146..531196,531227..531335,531411..531472,531503..531682,531935..532142,532178..532221,532285..532401,532478..532553,532663..532847,532926..532996,533085..533195,533292..533359,533432..533525,533634..533744,533837..533955,534044..>534210)	Acanthamoeba castellanii str. Neff	14921894
ACA1_280840	mRNA	ACA1_280840	NW_004457586.1	535518	539000	R	ACA1_280840	complement(join(<535518..535546,535631..535846,535933..536156,536234..536484,536563..536670,536840..536948,537098..537226,537376..537508,537619..537705,537793..537940,538038..538154,538254..538342,538488..538635,538719..538816,538904..>539000))	Acanthamoeba castellanii str. Neff	14921895
ACA1_280850	mRNA	ACA1_280850	NW_004457586.1	539103	540579	R	ACA1_280850	complement(join(<539103..539547,539741..539965,540034..540138,540212..>540579))	Acanthamoeba castellanii str. Neff	14921896
ACA1_280960	mRNA	ACA1_280960	NW_004457586.1	541529	542347	D	ACA1_280960	join(<541529..541579,541610..541718,541794..541855,541886..542065,542192..>542347)	Acanthamoeba castellanii str. Neff	14921897
ACA1_281070	mRNA	ACA1_281070	NW_004457586.1	542751	547193	R	ACA1_281070	complement(join(<542751..542846,542939..544813,544881..545023,545092..545185,545244..545384,545455..545547,545624..545755,545814..545897,546205..546313,546422..546550,546633..546765,546872..546958,547067..>547193))	Acanthamoeba castellanii str. Neff	14921898
ACA1_281180	mRNA	ACA1_281180	NW_004457586.1	548108	549543	R	ACA1_281180	complement(join(<548108..548188,548425..548580,548673..548777,548839..549003,549071..549160,549185..549218,549305..>549543))	Acanthamoeba castellanii str. Neff	14921899
ACA1_281190	mRNA	ACA1_281190	NW_004457586.1	549991	550971	D	ACA1_281190	join(<549991..550086,550159..550356,550439..550665,550737..>550971)	Acanthamoeba castellanii str. Neff	14921900
ACA1_281200	mRNA	ACA1_281200	NW_004457586.1	551062	560123	D	ACA1_281200	join(<551062..551211,551305..551372,551459..551589,551662..551787,551854..552014,552081..552214,552278..552575,552638..552746,552804..552934,553003..553200,553275..553418,553545..553808,553854..553967,554051..554188,554264..554437,554511..554774,554832..554897,554962..555099,555191..555329,555397..555568,555649..555782,555889..556100,556183..556294,556410..556494,556578..556668,556755..556835,556903..556988,557064..557242,557343..557467,557554..557619,557772..557848,557918..558032,558191..558892,558986..559122,559171..559537,559656..559784,559876..559947,560040..>560123)	Acanthamoeba castellanii str. Neff	14921901
ACA1_281210	mRNA	ACA1_281210	NW_004457586.1	560320	563452	R	ACA1_281210	complement(join(<560320..560740,560824..560917,561014..561260,561343..561591,561685..561841,561914..562215,562309..562517,562590..562664,562759..562886,562948..563027,563093..>563452))	Acanthamoeba castellanii str. Neff	14921902
ACA1_281220	mRNA	ACA1_281220	NW_004457586.1	564340	566092	D	ACA1_281220	join(<564340..564713,564800..564882,564984..565053,565092..565158,565234..565325,565391..565424,565561..565612,565741..565836,565904..566017,566091..>566092)	Acanthamoeba castellanii str. Neff	14921903
ACA1_281230	mRNA	ACA1_281230	NW_004457586.1	566614	567561	D	ACA1_281230	<566614..>567561	Acanthamoeba castellanii str. Neff	14921904
ACA1_281240	mRNA	ACA1_281240	NW_004457586.1	568258	570597	D	ACA1_281240	join(<568258..568346,568417..568639,568698..568862,568943..569114,569219..569378,569470..569575,569654..569762,569844..569953,570037..570117,570227..570364,570472..>570597)	Acanthamoeba castellanii str. Neff	14921905
ACA1_281250	mRNA	ACA1_281250	NW_004457586.1	570930	573640	D	ACA1_281250	join(<570930..570996,571103..571294,571407..571534,571623..571700,571822..571898,571964..572150,572290..572635,572716..572843,572953..573095,573238..>573640)	Acanthamoeba castellanii str. Neff	14921906
ACA1_281260	mRNA	ACA1_281260	NW_004457586.1	573692	577115	R	ACA1_281260	complement(join(<573692..574140,574277..574382,574543..574737,574823..574996,575073..575313,575415..575543,575662..575996,576081..576370,576454..576531,576625..576747,576899..>577115))	Acanthamoeba castellanii str. Neff	14921907
ACA1_281270	mRNA	ACA1_281270	NW_004457586.1	577150	578315	R	ACA1_281270	complement(join(<577150..577940,578093..578212,578291..>578315))	Acanthamoeba castellanii str. Neff	14921908
ACA1_281280	mRNA	ACA1_281280	NW_004457586.1	578455	579922	R	ACA1_281280	complement(join(<578455..578535,578639..578841,578974..579133,579213..579313,579394..579448,579522..579642,579810..>579922))	Acanthamoeba castellanii str. Neff	14921909
ACA1_281290	mRNA	ACA1_281290	NW_004457586.1	580249	581626	D	ACA1_281290	join(<580249..580441,580557..580715,580858..581052,581147..581320,581404..581564,581597..>581626)	Acanthamoeba castellanii str. Neff	14921910
ACA1_281300	mRNA	ACA1_281300	NW_004457586.1	581858	583820	D	ACA1_281300	join(<581858..582165,582234..582397,582690..582764,582854..582903,582996..583046,583115..583181,583272..583340,583412..583594,583717..>583820)	Acanthamoeba castellanii str. Neff	14921911
ACA1_281310	mRNA	ACA1_281310	NW_004457586.1	583967	584770	R	ACA1_281310	complement(<583967..>584770)	Acanthamoeba castellanii str. Neff	14921912
ACA1_281320	mRNA	ACA1_281320	NW_004457586.1	584898	588820	R	ACA1_281320	complement(join(<584898..585084,585242..585394,585569..585738,585823..585919,586046..586233,586319..586374,586477..586623,586731..586804,586907..587004,587088..587240,587313..587385,587459..587634,587703..587957,588053..588513,588676..>588820))	Acanthamoeba castellanii str. Neff	14921913
ACA1_281330	mRNA	ACA1_281330	NW_004457586.1	589012	591757	R	ACA1_281330	complement(join(<589012..589127,589218..589334,589406..589523,589596..589699,589768..589864,589953..590074,590148..590285,590364..590444,590525..590633,590719..590761,590840..590958,591046..591089,591160..591239,591317..591377,591462..591552,591650..>591757))	Acanthamoeba castellanii str. Neff	14921914
ACA1_281340	mRNA	ACA1_281340	NW_004457586.1	591888	593497	R	ACA1_281340	complement(join(<591888..591957,592047..592169,592382..592463,592546..592605,592809..592938,593028..593104,593187..593288,593344..593397,593461..>593497))	Acanthamoeba castellanii str. Neff	14921915
ACA1_281350	mRNA	ACA1_281350	NW_004457586.1	593520	593964	R	ACA1_281350	complement(join(<593520..593655,593724..593786,593876..>593964))	Acanthamoeba castellanii str. Neff	14921916
ACA1_281460	mRNA	ACA1_281460	NW_004457586.1	594233	595198	D	ACA1_281460	join(<594233..594243,594323..594453,594542..594623,594692..594747,594853..594972,595053..>595198)	Acanthamoeba castellanii str. Neff	14921917
ACA1_281570	mRNA	ACA1_281570	NW_004457586.1	597261	597760	R	ACA1_281570	complement(join(<597261..597314,597382..597444,597533..>597760))	Acanthamoeba castellanii str. Neff	14921918
ACA1_281580	mRNA	ACA1_281580	NW_004457586.1	597892	598858	D	ACA1_281580	join(<597892..598126,598210..598291,598362..598417,598514..598633,598713..>598858)	Acanthamoeba castellanii str. Neff	14921919
ACA1_281590	mRNA	ACA1_281590	NW_004457586.1	600079	601426	D	ACA1_281590	join(<600079..600402,600511..600690,600754..600822,600905..600990,601108..>601426)	Acanthamoeba castellanii str. Neff	14921920
ACA1_281600	mRNA	ACA1_281600	NW_004457586.1	601522	602920	R	ACA1_281600	complement(join(<601522..601736,601816..602388,602489..602574,602694..602742,602827..>602920))	Acanthamoeba castellanii str. Neff	14921921
ACA1_281610	mRNA	ACA1_281610	NW_004457586.1	603169	603622	D	ACA1_281610	join(<603169..603286,603317..603417,603515..>603622)	Acanthamoeba castellanii str. Neff	14921922
ACA1_281820	mRNA	ACA1_281820	NW_004457586.1	606547	608261	D	ACA1_281820	join(<606547..606554,606607..606700,606789..606943,606977..607084,607201..607310,607382..607444,607514..607600,607676..607769,607841..607920,608026..608132,608196..>608261)	Acanthamoeba castellanii str. Neff	14921923
ACA1_281930	mRNA	ACA1_281930	NW_004457586.1	609797	610823	D	ACA1_281930	join(<609797..609985,610069..610093,610163..610473,610575..>610823)	Acanthamoeba castellanii str. Neff	14921924
ACA1_281940	mRNA	ACA1_281940	NW_004457586.1	611166	611930	R	ACA1_281940	complement(join(<611166..611426,611510..611630,611720..611777,611855..>611930))	Acanthamoeba castellanii str. Neff	14921925
ACA1_281950	mRNA	ACA1_281950	NW_004457586.1	612134	614787	R	ACA1_281950	complement(join(<612134..612411,612487..612564,612639..612809,612886..613014,613080..613188,613254..613354,613467..613595,613680..613788,614042..614168,614280..614375,614452..614553,614654..>614787))	Acanthamoeba castellanii str. Neff	14921926
ACA1_282060	mRNA	ACA1_282060	NW_004457586.1	615603	616036	R	ACA1_282060	complement(join(<615603..615762,615858..>616036))	Acanthamoeba castellanii str. Neff	14921927
ACA1_282170	mRNA	ACA1_282170	NW_004457586.1	616210	617082	R	ACA1_282170	complement(join(<616210..616322,616412..616590,616646..616793,616859..616978,616992..>617082))	Acanthamoeba castellanii str. Neff	14921928
ACA1_282180	mRNA	ACA1_282180	NW_004457586.1	617499	621395	D	ACA1_282180	join(<617499..617636,617694..617769,617837..617952,618032..618158,618236..618372,618439..618541,618629..618726,618794..619072,619148..619376,619464..619719,619801..619891,619976..620081,620150..620316,620470..620710,620783..620902,620977..621061,621140..>621395)	Acanthamoeba castellanii str. Neff	14921929
ACA1_282190	mRNA	ACA1_282190	NW_004457586.1	621667	623734	R	ACA1_282190	complement(join(<621667..621758,621858..621905,621978..622053,622130..622267,622357..622504,622576..622680,622784..622904,623032..623109,623223..623299,623415..623499,623587..>623734))	Acanthamoeba castellanii str. Neff	14921930
ACA1_282200	mRNA	ACA1_282200	NW_004457586.1	623903	625646	D	ACA1_282200	join(<623903..624032,624105..624188,624244..624315,624737..624820,624868..624942,625011..625045,625141..625267,625324..625415,625491..>625646)	Acanthamoeba castellanii str. Neff	14921931
ACA1_282210	mRNA	ACA1_282210	NW_004457586.1	625819	628544	D	ACA1_282210	join(<625819..626109,626261..626407,626499..626593,626672..626743,626811..626878,626977..627137,627238..627390,627482..627570,627639..627739,627808..628219,628287..628399,628477..>628544)	Acanthamoeba castellanii str. Neff	14921932
ACA1_282220	mRNA	ACA1_282220	NW_004457586.1	628777	631950	D	ACA1_282220	join(<628777..629019,629144..629290,629385..629479,629559..629627,629724..629791,629954..630114,630220..630372,630470..630558,630633..630733,630813..631230,631339..631451,631814..>631950)	Acanthamoeba castellanii str. Neff	14921933
ACA1_282230	mRNA	ACA1_282230	NW_004457586.1	631688	632455	R	ACA1_282230	complement(join(<631688..631763,631861..631981,632099..632254,632317..>632455))	Acanthamoeba castellanii str. Neff	14921934
ACA1_282240	mRNA	ACA1_282240	NW_004457586.1	632612	637750	R	ACA1_282240	complement(join(<632612..632761,632840..632945,633097..633131,633237..633335,633443..633546,633690..633796,633921..635139,635279..635420,635504..635869,635976..636098,636167..636231,636301..636429,636520..>637750))	Acanthamoeba castellanii str. Neff	14921935
ACA1_282250	mRNA	ACA1_282250	NW_004457586.1	638687	639067	D	ACA1_282250	<638687..>639067	Acanthamoeba castellanii str. Neff	14921936
ACA1_282260	mRNA	ACA1_282260	NW_004457586.1	639488	640860	R	ACA1_282260	complement(join(<639488..639561,639649..639784,639866..639964,640044..640135,640197..640288,640380..640501,640581..640780,640818..>640860))	Acanthamoeba castellanii str. Neff	14921937
ACA1_282270	mRNA	ACA1_282270	NW_004457586.1	641071	643458	R	ACA1_282270	complement(join(<641071..641093,641232..641318,641383..641701,641775..641917,642000..>643458))	Acanthamoeba castellanii str. Neff	14921938
ACA1_282280	mRNA	ACA1_282280	NW_004457586.1	643785	644529	D	ACA1_282280	join(<643785..644015,644072..644186,644244..644323,644398..>644529)	Acanthamoeba castellanii str. Neff	14921939
ACA1_282290	mRNA	ACA1_282290	NW_004457586.1	644838	645150	D	ACA1_282290	join(<644838..644883,644939..>645150)	Acanthamoeba castellanii str. Neff	14921940
ACA1_282300	mRNA	ACA1_282300	NW_004457586.1	645483	646185	D	ACA1_282300	join(<645483..645602,645685..645733,645820..645979,646062..>646185)	Acanthamoeba castellanii str. Neff	14921941
ACA1_282310	mRNA	ACA1_282310	NW_004457586.1	646427	649548	D	ACA1_282310	join(<646427..646555,646637..646697,646797..646923,647002..647071,647205..647261,647329..647409,647544..647669,647779..647965,648048..648376,648446..648498,648663..648704,648813..649115,649182..>649548)	Acanthamoeba castellanii str. Neff	14921942
ACA1_282330	mRNA	ACA1_282330	NW_004457586.1	652543	653581	D	ACA1_282330	join(<652543..652645,652735..652856,652929..653012,653075..653163,653232..653367,653429..>653581)	Acanthamoeba castellanii str. Neff	14921944
ACA1_282340	mRNA	ACA1_282340	NW_004457586.1	653677	655940	R	ACA1_282340	complement(join(<653677..654705,654810..655530,655606..655719,655879..>655940))	Acanthamoeba castellanii str. Neff	14921945
ACA1_282350	mRNA	ACA1_282350	NW_004457586.1	656610	661155	R	ACA1_282350	complement(join(<656610..656747,656902..657089,657180..657299,657386..657497,657583..657697,657764..657881,657967..658242,658442..658561,658673..658808,658889..659077,659420..659488,659580..660034,660123..660238,660329..660454,660515..660603,660679..660870,660955..>661155))	Acanthamoeba castellanii str. Neff	14921946
ACA1_282360	mRNA	ACA1_282360	NW_004457586.1	661661	662969	R	ACA1_282360	complement(join(<661661..661898,661983..662074,662165..662236,662312..662493,662538..662645,662710..662761,662826..>662969))	Acanthamoeba castellanii str. Neff	14921947
ACA1_282370	mRNA	ACA1_282370	NW_004457586.1	663240	664275	D	ACA1_282370	join(<663240..663436,663528..663587,663680..663812,663892..663999,664090..>664275)	Acanthamoeba castellanii str. Neff	14921948
ACA1_282380	mRNA	ACA1_282380	NW_004457586.1	664432	666625	R	ACA1_282380	complement(join(<664432..664808,664927..665740,665821..665989,666101..666196,666273..666374,666492..>666625))	Acanthamoeba castellanii str. Neff	14921949
ACA1_282390	mRNA	ACA1_282390	NW_004457586.1	666951	671752	R	ACA1_282390	complement(join(<666951..667110,667211..667442,667518..667649,667671..667696,667781..667883,668000..668186,668263..668393,668447..668615,668715..668730,668748..669055,669159..669275,669344..669755,669849..670005,670052..670270,670326..670426,670532..670638,670726..670868,670938..671041,671295..671553,671644..>671752))	Acanthamoeba castellanii str. Neff	14921950
ACA1_282400	mRNA	ACA1_282400	NW_004457586.1	672811	676397	D	ACA1_282400	join(<672811..672937,673135..673304,673405..673458,673572..673759,673871..673973,674041..674152,674239..674340,674458..674564,674660..674802,674889..674958,675047..675281,675388..675514,675601..675727,675802..675879,675965..676116,676220..>676397)	Acanthamoeba castellanii str. Neff	14921951
ACA1_282410	mRNA	ACA1_282410	NW_004457586.1	676589	677372	D	ACA1_282410	join(<676589..676885,677007..>677372)	Acanthamoeba castellanii str. Neff	14921952
ACA1_282420	mRNA	ACA1_282420	NW_004457586.1	677460	678233	D	ACA1_282420	join(<677460..677577,677688..677933,678001..>678233)	Acanthamoeba castellanii str. Neff	14921953
ACA1_282430	mRNA	ACA1_282430	NW_004457586.1	679276	680216	R	ACA1_282430	complement(join(<679276..679649,679802..679859,679875..>680216))	Acanthamoeba castellanii str. Neff	14921954
ACA1_282440	mRNA	ACA1_282440	NW_004457586.1	680333	681696	D	ACA1_282440	join(<680333..680488,680557..680643,680742..680878,680961..681064,681136..681213,681312..681534,681600..>681696)	Acanthamoeba castellanii str. Neff	14921955
ACA1_282450	mRNA	ACA1_282450	NW_004457586.1	681840	682547	R	ACA1_282450	complement(join(<681840..682112,682254..>682547))	Acanthamoeba castellanii str. Neff	14921956
ACA1_282460	mRNA	ACA1_282460	NW_004457586.1	683181	686234	D	ACA1_282460	join(<683181..683325,683538..683589,683745..683765,683837..683931,684030..684242,684416..684684,684810..684838,684965..685097,685199..685428,685620..685846,685927..>686234)	Acanthamoeba castellanii str. Neff	14921957
ACA1_282470	mRNA	ACA1_282470	NW_004457586.1	687520	689620	R	ACA1_282470	complement(join(<687520..687582,687685..687822,687974..688049,688135..688229,688352..688594,688697..>689620))	Acanthamoeba castellanii str. Neff	14921958
ACA1_282480	mRNA	ACA1_282480	NW_004457586.1	690222	693604	D	ACA1_282480	join(<690222..690254,690564..690668,690751..690803,690941..690979,691086..691185,691290..691385,691512..693008,693123..693410,693494..>693604)	Acanthamoeba castellanii str. Neff	14921959
ACA1_282500	mRNA	ACA1_282500	NW_004457586.1	694792	696279	R	ACA1_282500	complement(join(<694792..694970,695051..695159,695275..695303,695487..695609,695699..695788,695892..>696279))	Acanthamoeba castellanii str. Neff	14921961
ACA1_282510	mRNA	ACA1_282510	NW_004457586.1	696352	697536	D	ACA1_282510	join(<696352..696358,696417..696594,696663..696792,696877..697014,697085..697219,697303..>697536)	Acanthamoeba castellanii str. Neff	14921962
ACA1_282520	mRNA	ACA1_282520	NW_004457586.1	697637	699029	D	ACA1_282520	join(<697637..697662,697728..697808,697874..697995,698073..698173,698245..698313,698397..698615,698689..698755,698830..>699029)	Acanthamoeba castellanii str. Neff	14921963
ACA1_282530	mRNA	ACA1_282530	NW_004457586.1	699112	705532	D	ACA1_282530	join(<699112..699140,699208..699357,699435..699537,699603..699743,699784..699892,699967..700195,700267..700363,700439..700621,700693..700763,700823..700914,700991..701099,701173..701320,701398..701485,701557..701642,701724..701825,701912..701995,702087..702344,702428..702506,702588..702676,702754..702843,702943..702999,703079..703144,703214..703477,703595..703726,703818..703883,703976..704105,704210..704322,704421..704537,704634..704757,704847..704944,705027..705088,705197..705269,705362..>705532)	Acanthamoeba castellanii str. Neff	14921964
ACA1_282540	mRNA	ACA1_282540	NW_004457586.1	705598	706874	R	ACA1_282540	complement(join(<705598..705760,705856..706070,706158..706383,706452..706575,706666..706740,706799..>706874))	Acanthamoeba castellanii str. Neff	14921965
ACA1_282550	mRNA	ACA1_282550	NW_004457586.1	707158	708234	D	ACA1_282550	join(<707158..707489,707589..>708234)	Acanthamoeba castellanii str. Neff	14921966
ACA1_282660	mRNA	ACA1_282660	NW_004457586.1	711676	714616	D	ACA1_282660	join(<711676..711733,711858..711893,711955..712051,712146..712437,712550..712924,713002..713126,713198..713303,713334..713506,713578..713713,713794..714095,714176..714240,714330..>714616)	Acanthamoeba castellanii str. Neff	14921967
ACA1_282670	mRNA	ACA1_282670	NW_004457586.1	715140	716801	D	ACA1_282670	join(<715140..715406,715529..715691,715755..715859,715930..716060,716142..716320,716399..>716801)	Acanthamoeba castellanii str. Neff	14921968
ACA1_282680	mRNA	ACA1_282680	NW_004457586.1	717205	717786	D	ACA1_282680	join(<717205..717417,717509..717626,717752..>717786)	Acanthamoeba castellanii str. Neff	14921969
ACA1_282690	mRNA	ACA1_282690	NW_004457586.1	718140	718949	D	ACA1_282690	join(<718140..718589,718604..718631,718744..>718949)	Acanthamoeba castellanii str. Neff	14921970
ACA1_282700	mRNA	ACA1_282700	NW_004457586.1	719108	719871	D	ACA1_282700	join(<719108..719212,719287..719351,719453..719549,719701..>719871)	Acanthamoeba castellanii str. Neff	14921971
ACA1_282710	mRNA	ACA1_282710	NW_004457586.1	720156	724205	D	ACA1_282710	join(<720156..720326,720443..720590,720710..720826,720912..721045,721147..721287,721374..721447,721523..721623,721702..721877,721899..722246,722381..722445,722535..722652,722719..722808,722847..723308,723375..723597,723689..723836,723914..>724205)	Acanthamoeba castellanii str. Neff	14921972
ACA1_282720	mRNA	ACA1_282720	NW_004457586.1	724290	725601	R	ACA1_282720	complement(join(<724290..724464,724532..724598,724667..724864,724933..725037,725110..725326,725403..725452,725541..>725601))	Acanthamoeba castellanii str. Neff	14921973
ACA1_282730	mRNA	ACA1_282730	NW_004457586.1	725821	727355	D	ACA1_282730	join(<725821..725829,726088..726190,726279..726310,726395..726676,726738..726872,726945..727065,727150..>727355)	Acanthamoeba castellanii str. Neff	14921974
ACA1_282740	mRNA	ACA1_282740	NW_004457586.1	727493	728771	D	ACA1_282740	join(<727493..727535,727599..727928,728001..728041,728125..728247,728325..728433,728515..728639,728703..>728771)	Acanthamoeba castellanii str. Neff	14921975
ACA1_282850	mRNA	ACA1_282850	NW_004457586.1	731221	735939	R	ACA1_282850	complement(join(<731221..731295,731501..731791,731983..732074,732319..732436,732507..732735,732929..733026,733218..733475,733548..733776,733962..734217,734238..734275,734477..734612,734677..734805,735057..735141,735202..735467,735676..735846,735930..>735939))	Acanthamoeba castellanii str. Neff	14921976
ACA1_282860	mRNA	ACA1_282860	NW_004457586.1	736834	739159	R	ACA1_282860	complement(join(<736834..737017,737088..737195,737282..737427,737587..737613,737945..738028,738114..738215,738302..738419,738507..738611,738693..738811,738917..739012,739082..>739159))	Acanthamoeba castellanii str. Neff	14921977
ACA1_282870	mRNA	ACA1_282870	NW_004457586.1	739314	739935	D	ACA1_282870	join(<739314..739692,739778..>739935)	Acanthamoeba castellanii str. Neff	14921978
ACA1_282880	mRNA	ACA1_282880	NW_004457586.1	740294	741409	D	ACA1_282880	join(<740294..740346,740424..740461,740524..740675,740769..740849,740947..741079,741176..741287,741391..>741409)	Acanthamoeba castellanii str. Neff	14921979
ACA1_282890	mRNA	ACA1_282890	NW_004457586.1	741726	743538	D	ACA1_282890	join(<741726..741834,741902..742068,742155..742218,742290..742371,742445..742511,742600..742803,743077..743351,743448..>743538)	Acanthamoeba castellanii str. Neff	14921980
ACA1_282900	mRNA	ACA1_282900	NW_004457586.1	743842	744279	R	ACA1_282900	complement(join(<743842..744152,744261..>744279))	Acanthamoeba castellanii str. Neff	14921981
ACA1_282910	mRNA	ACA1_282910	NW_004457586.1	744668	745309	D	ACA1_282910	join(<744668..744955,745037..>745309)	Acanthamoeba castellanii str. Neff	14921982
ACA1_282920	mRNA	ACA1_282920	NW_004457586.1	745443	747741	R	ACA1_282920	complement(join(<745443..745806,745899..745989,746064..746193,746294..746443,746544..746642,746719..746838,746919..747044,747152..747170,747251..747328,747404..747537,747607..>747741))	Acanthamoeba castellanii str. Neff	14921983
ACA1_282930	mRNA	ACA1_282930	NW_004457586.1	748219	750086	R	ACA1_282930	complement(join(<748219..748358,748437..748596,748665..748876,748970..749077,749211..749361,749422..749553,749655..749831,749955..750012,750046..>750086))	Acanthamoeba castellanii str. Neff	14921984
ACA1_282940	mRNA	ACA1_282940	NW_004457586.1	750521	752760	R	ACA1_282940	complement(join(<750521..750755,750861..750894,750998..751103,751182..751334,751408..751520,751626..751720,751790..751913,752007..752201,752286..752372,752455..752564,752639..>752760))	Acanthamoeba castellanii str. Neff	14921985
ACA1_282950	mRNA	ACA1_282950	NW_004457586.1	752965	753240	D	ACA1_282950	<752965..>753240	Acanthamoeba castellanii str. Neff	14921986
ACA1_282960	mRNA	ACA1_282960	NW_004457586.1	753315	755875	R	ACA1_282960	complement(join(<753315..753966,754056..754171,754256..754352,754418..754623,754754..754912,754998..755120,755206..755326,755673..>755875))	Acanthamoeba castellanii str. Neff	14921987
ACA1_282970	mRNA	ACA1_282970	NW_004457586.1	755991	757273	D	ACA1_282970	join(<755991..756039,756101..756337,756416..756532,756955..757043,757115..>757273)	Acanthamoeba castellanii str. Neff	14921988
ACA1_282980	mRNA	ACA1_282980	NW_004457586.1	757365	758282	R	ACA1_282980	complement(join(<757365..757507,757595..757726,757796..757935,758002..>758282))	Acanthamoeba castellanii str. Neff	14921989
ACA1_282990	mRNA	ACA1_282990	NW_004457586.1	758514	759657	D	ACA1_282990	join(<758514..758628,758700..758807,758866..759084,759143..759210,759280..759373,759442..759476,759550..>759657)	Acanthamoeba castellanii str. Neff	14921990
ACA1_283000	mRNA	ACA1_283000	NW_004457586.1	760288	763361	D	ACA1_283000	join(<760288..760341,760371..760442,760512..760580,760650..760721,760923..760991,761056..761127,761190..761261,761335..761409,761480..761548,761621..761692,761755..761826,761903..761974,762045..762116,762187..762261,762296..762391,762480..762537,762624..762923,762943..>763361)	Acanthamoeba castellanii str. Neff	14921991
ACA1_283010	mRNA	ACA1_283010	NW_004457586.1	763518	764119	R	ACA1_283010	complement(join(<763518..763677,763755..>764119))	Acanthamoeba castellanii str. Neff	14921992
ACA1_283030	mRNA	ACA1_283030	NW_004457586.1	769196	771981	D	ACA1_283030	join(<769196..769292,769402..769584,769693..769891,770017..770296,770414..770511,770596..770776,770885..770996,771058..771245,771414..771619,771732..>771981)	Acanthamoeba castellanii str. Neff	14921994
ACA1_283040	mRNA	ACA1_283040	NW_004457586.1	772069	773276	R	ACA1_283040	complement(join(<772069..772078,772191..772264,772372..772518,772605..772629,772649..772694,772759..772774,772842..772938,773002..773049,773152..>773276))	Acanthamoeba castellanii str. Neff	14921995
ACA1_283050	mRNA	ACA1_283050	NW_004457586.1	773569	774200	D	ACA1_283050	join(<773569..773683,773816..773943,774024..774069,774175..>774200)	Acanthamoeba castellanii str. Neff	14921996
ACA1_283060	mRNA	ACA1_283060	NW_004457586.1	774493	775054	D	ACA1_283060	join(<774493..774543,774589..774637,774697..774800,774860..774905,774978..>775054)	Acanthamoeba castellanii str. Neff	14921997
ACA1_283070	mRNA	ACA1_283070	NW_004457586.1	775250	776260	R	ACA1_283070	complement(join(<775250..775641,775717..>776260))	Acanthamoeba castellanii str. Neff	14921998
ACA1_283080	mRNA	ACA1_283080	NW_004457586.1	776490	783331	R	ACA1_283080	complement(join(<776490..776941,777698..777722,777783..777887,777981..778115,778234..778405,778502..778855,778930..779066,779164..779454,779533..779763,779849..779989,780059..780265,780340..780692,780770..780883,780958..781338,781414..781569,781634..781835,781929..781999,782101..>783331))	Acanthamoeba castellanii str. Neff	14921999
ACA1_283190	mRNA	ACA1_283190	NW_004457586.1	783503	785753	D	ACA1_283190	join(<783503..783803,783870..784040,784114..784308,784471..784563,784643..784764,784828..785118,785162..785274,785348..>785753)	Acanthamoeba castellanii str. Neff	14922000
ACA1_283200	mRNA	ACA1_283200	NW_004457586.1	786306	787022	D	ACA1_283200	join(<786306..786636,786721..>787022)	Acanthamoeba castellanii str. Neff	14922001
ACA1_283210	mRNA	ACA1_283210	NW_004457586.1	787136	790116	R	ACA1_283210	complement(join(<787136..787235,787356..787671,787780..787983,788114..788183,788274..788325,788449..788531,788642..788874,789059..789347,789512..789801,789988..790012,790081..>790116))	Acanthamoeba castellanii str. Neff	14922002
ACA1_283220	mRNA	ACA1_283220	NW_004457586.1	790398	793345	D	ACA1_283220	join(<790398..790496,790717..790794,790915..791022,791151..791282,791387..791520,791599..791674,791745..791864,791959..792215,792331..792498,792643..792805,792947..>793345)	Acanthamoeba castellanii str. Neff	14922003
ACA1_283230	mRNA	ACA1_283230	NW_004457586.1	793843	798217	D	ACA1_283230	join(<793843..794147,794313..794653,794763..794854,794970..795092,795280..795490,795579..795910,796041..796142,796256..796384,796493..796613,796710..796846,796993..797035,797127..797341,797441..797697,797800..798022,798116..>798217)	Acanthamoeba castellanii str. Neff	14922004
ACA1_283240	mRNA	ACA1_283240	NW_004457586.1	799621	800325	D	ACA1_283240	join(<799621..799966,800048..>800325)	Acanthamoeba castellanii str. Neff	14922005
ACA1_283250	mRNA	ACA1_283250	NW_004457586.1	800545	803475	R	ACA1_283250	complement(join(<800545..801029,801100..801324,801410..801525,801582..801711,801803..801963,802047..802163,802238..802298,802363..802508,802579..802640,802708..802835,802907..803042,803099..803333,803396..>803475))	Acanthamoeba castellanii str. Neff	14922006
ACA1_283260	mRNA	ACA1_283260	NW_004457586.1	804886	806501	D	ACA1_283260	join(<804886..805348,805480..805728,805838..806088,806199..>806501)	Acanthamoeba castellanii str. Neff	14922007
ACA1_283270	mRNA	ACA1_283270	NW_004457586.1	806819	807669	R	ACA1_283270	complement(join(<806819..807188,807280..807477,807554..>807669))	Acanthamoeba castellanii str. Neff	14922008
ACA1_283280	mRNA	ACA1_283280	NW_004457586.1	807844	808622	D	ACA1_283280	join(<807844..807963,808049..808176,808278..808380,808512..>808622)	Acanthamoeba castellanii str. Neff	14922009
ACA1_283290	mRNA	ACA1_283290	NW_004457586.1	808763	809761	R	ACA1_283290	complement(join(<808763..808972,809065..809224,809320..809397,809491..809593,809692..>809761))	Acanthamoeba castellanii str. Neff	14922010
ACA1_283300	mRNA	ACA1_283300	NW_004457586.1	809846	813260	R	ACA1_283300	complement(join(<809846..810166,810270..810562,810647..810856,810965..811096,811186..811361,811450..811591,811671..811843,811962..812094,812206..812302,812415..812571,812649..812705,812828..812966,813215..>813260))	Acanthamoeba castellanii str. Neff	14922011
ACA1_283310	mRNA	ACA1_283310	NW_004457586.1	813670	816423	R	ACA1_283310	complement(join(<813670..813872,813994..814168,814263..814379,814464..814527,814650..814795,814865..816288,816318..>816423))	Acanthamoeba castellanii str. Neff	14922012
ACA1_283320	mRNA	ACA1_283320	NW_004457586.1	816740	818542	D	ACA1_283320	<816740..>818542	Acanthamoeba castellanii str. Neff	14922013
ACA1_283430	mRNA	ACA1_283430	NW_004457586.1	818792	819754	R	ACA1_283430	complement(join(<818792..819149,819273..>819754))	Acanthamoeba castellanii str. Neff	14922014
ACA1_283440	mRNA	ACA1_283440	NW_004457586.1	819861	823395	D	ACA1_283440	join(<819861..819872,820129..820299,820415..820559,820653..820777,820989..821140,821255..821315,821486..821547,821680..821808,821908..822049,822181..822273,822382..822621,822687..822773,822878..822979,823118..823233,823326..>823395)	Acanthamoeba castellanii str. Neff	14922015
ACA1_283450	mRNA	ACA1_283450	NW_004457586.1	823524	825949	R	ACA1_283450	complement(join(<823524..823624,823715..823809,823878..823934,824007..824107,824162..824281,824404..824529,824676..824785,824921..825023,825199..825283,825376..825541,825634..825726,825823..>825949))	Acanthamoeba castellanii str. Neff	14922016
ACA1_283460	mRNA	ACA1_283460	NW_004457586.1	826135	827573	R	ACA1_283460	complement(join(<826135..826228,826325..826568,826670..826813,826925..827031,827144..827229,827378..827423,827458..>827573))	Acanthamoeba castellanii str. Neff	14922017
ACA1_283470	mRNA	ACA1_283470	NW_004457586.1	828053	836246	D	ACA1_283470	join(<828053..828110,828250..828321,828431..828522,828639..828729,828797..829165,829269..829301,829399..829521,829598..829669,829801..829943,830053..830197,830274..830420,830536..830596,830765..830852,830936..831025,831103..831204,831282..831425,831504..831651,831727..831870,831959..832113,832188..832293,832353..832951,833043..833120,833255..833359,833444..833737,833816..833902,834020..834307,834460..834544,834662..835387,835420..835542,835559..836061,836133..>836246)	Acanthamoeba castellanii str. Neff	14922018
ACA1_283480	mRNA	ACA1_283480	NW_004457586.1	836590	837023	D	ACA1_283480	join(<836590..836680,836752..836866,836933..>837023)	Acanthamoeba castellanii str. Neff	14922019
ACA1_283490	mRNA	ACA1_283490	NW_004457586.1	837319	838962	D	ACA1_283490	join(<837319..837514,837582..837691,837754..838142,838233..838357,838436..838511,838573..838644,838697..838734,838823..>838962)	Acanthamoeba castellanii str. Neff	14922020
ACA1_283500	mRNA	ACA1_283500	NW_004457586.1	840374	842136	R	ACA1_283500	complement(join(<840374..840601,840668..840988,841112..841258,841362..841631,841797..841888,842061..>842136))	Acanthamoeba castellanii str. Neff	14922021
ACA1_283510	mRNA	ACA1_283510	NW_004457586.1	842422	846224	D	ACA1_283510	join(<842422..842454,842608..842812,842940..843026,843152..843301,843408..843651,843729..844044,844123..844245,844344..844451,844531..844648,844788..844912,845016..845106,845225..845593,845671..845987,846024..>846224)	Acanthamoeba castellanii str. Neff	14922022
ACA1_283520	mRNA	ACA1_283520	NW_004457586.1	846640	850075	R	ACA1_283520	complement(join(<846640..847014,847138..847245,847361..847580,847672..847765,847859..847925,848007..848116,848183..848261,848390..848469,848564..848635,848750..848879,849024..849065,849153..849245,849447..849506,849667..849814,849909..>850075))	Acanthamoeba castellanii str. Neff	14922023
ACA1_283530	mRNA	ACA1_283530	NW_004457586.1	850174	853618	R	ACA1_283530	complement(join(<850174..850352,850442..850649,850724..850933,851015..851143,851250..851404,851478..851605,851692..851771,851870..852018,852100..852195,852317..852478,852582..852851,852965..853096,853204..853284,853379..853493,853592..>853618))	Acanthamoeba castellanii str. Neff	14922024
ACA1_283540	mRNA	ACA1_283540	NW_004457586.1	853828	854608	D	ACA1_283540	join(<853828..853969,854058..854212,854297..>854608)	Acanthamoeba castellanii str. Neff	14922025
ACA1_283550	mRNA	ACA1_283550	NW_004457586.1	854746	856445	R	ACA1_283550	complement(join(<854746..854888,855015..855229,855320..855510,855622..855753,855861..856282,856436..>856445))	Acanthamoeba castellanii str. Neff	14922026
ACA1_283560	mRNA	ACA1_283560	NW_004457586.1	856691	859789	D	ACA1_283560	join(<856691..856901,857225..857380,857456..857534,857637..857789,857915..858289,858362..858534,858607..858833,859014..859227,859317..>859789)	Acanthamoeba castellanii str. Neff	14922027
ACA1_283570	mRNA	ACA1_283570	NW_004457586.1	860881	861654	R	ACA1_283570	complement(join(<860881..861244,861305..>861654))	Acanthamoeba castellanii str. Neff	14922028
ACA1_283580	mRNA	ACA1_283580	NW_004457586.1	864724	865364	R	ACA1_283580	complement(join(<864724..865314,865353..>865364))	Acanthamoeba castellanii str. Neff	14922029
ACA1_283590	mRNA	ACA1_283590	NW_004457586.1	866368	869860	R	ACA1_283590	complement(join(<866368..866571,866683..866764,866844..866914,867028..867116,867262..867417,867497..867719,867865..867987,868072..868175,868291..868360,868470..868894,868988..869754,869847..>869860))	Acanthamoeba castellanii str. Neff	14922030
ACA1_283710	mRNA	ACA1_283710	NW_004457586.1	877418	878340	R	ACA1_283710	complement(join(<877418..877476,877580..877988,878090..878194,878323..>878340))	Acanthamoeba castellanii str. Neff	14922032
ACA1_283720	mRNA	ACA1_283720	NW_004457586.1	878695	880162	R	ACA1_283720	complement(join(<878695..878739,878999..879111,879238..879463,879545..879765,879842..879906,879938..879950,880015..>880162))	Acanthamoeba castellanii str. Neff	14922033
ACA1_283930	mRNA	ACA1_283930	NW_004457586.1	880909	882229	R	ACA1_283930	complement(join(<880909..881482,881569..881816,881827..881857,881973..>882229))	Acanthamoeba castellanii str. Neff	14922034
ACA1_283940	mRNA	ACA1_283940	NW_004457586.1	883063	883500	D	ACA1_283940	<883063..>883500	Acanthamoeba castellanii str. Neff	14922035
ACA1_283950	mRNA	ACA1_283950	NW_004457586.1	883963	884210	D	ACA1_283950	join(<883963..884010,884034..>884210)	Acanthamoeba castellanii str. Neff	14922036
ACA1_283960	mRNA	ACA1_283960	NW_004457586.1	884349	884744	R	ACA1_283960	complement(join(<884349..884502,884611..>884744))	Acanthamoeba castellanii str. Neff	14922037
ACA1_283970	mRNA	ACA1_283970	NW_004457586.1	885015	885917	R	ACA1_283970	complement(join(<885015..885465,885490..>885917))	Acanthamoeba castellanii str. Neff	14922038
ACA1_283980	mRNA	ACA1_283980	NW_004457586.1	886093	886426	R	ACA1_283980	complement(join(<886093..886144,886215..>886426))	Acanthamoeba castellanii str. Neff	14922039
ACA1_284090	mRNA	ACA1_284090	NW_004457586.1	887447	888576	R	ACA1_284090	complement(join(<887447..887538,887736..887887,887979..888179,888287..888392,888462..>888576))	Acanthamoeba castellanii str. Neff	14922040
ACA1_284100	mRNA	ACA1_284100	NW_004457586.1	888784	888954	R	ACA1_284100	complement(<888784..>888954)	Acanthamoeba castellanii str. Neff	14922041
ACA1_284210	mRNA	ACA1_284210	NW_004457586.1	890317	892007	R	ACA1_284210	complement(join(<890317..890414,890502..890665,890701..890831,890975..891139,891281..891401,891509..891613,891898..>892007))	Acanthamoeba castellanii str. Neff	14922042
ACA1_284220	mRNA	ACA1_284220	NW_004457586.1	892274	893071	R	ACA1_284220	complement(join(<892274..892336,892445..892557,892716..892748,892816..>893071))	Acanthamoeba castellanii str. Neff	14922043
ACA1_284230	mRNA	ACA1_284230	NW_004457586.1	893439	895644	R	ACA1_284230	complement(join(<893439..893524,893642..893769,893861..894134,894207..894347,894433..894792,894878..894983,895061..895159,895270..>895644))	Acanthamoeba castellanii str. Neff	14922044
ACA1_284240	mRNA	ACA1_284240	NW_004457586.1	896267	909994	R	ACA1_284240	complement(join(<896267..896789,896879..896976,897061..897236,897311..897441,897522..897580,897649..897762,897850..897968,898074..898259,898522..898595,898659..898762,898898..898989,899113..899201,899275..899378,899498..899629,899757..899962,900089..900161,900186..900242,900355..900460,900554..900673,900783..900866,900976..901787,901965..902592,902696..902901,903029..903101,903172..903260,903484..903596,903707..903822,903916..904029,904133..904216,904357..904488,904631..904890,904981..905095,905130..905278,905403..905540,905618..905703,905813..905882,905995..906143,906232..906328,906457..906565,906674..906873,906935..907058,907124..907292,907418..907508,907590..907681,907783..907861,907934..908135,908216..908464,908595..908719,908787..908891,909003..909196,909296..909359,909439..909480,909602..909689,909894..>909994))	Acanthamoeba castellanii str. Neff	14922045
ACA1_284250	mRNA	ACA1_284250	NW_004457586.1	910753	911943	D	ACA1_284250	join(<910753..910885,910980..911041,911145..911196,911259..911320,911445..911543,911632..>911943)	Acanthamoeba castellanii str. Neff	14922046
ACA1_284260	mRNA	ACA1_284260	NW_004457586.1	912068	915401	R	ACA1_284260	complement(join(<912068..913012,913110..913364,913454..913522,913534..913693,913771..913873,913948..914134,914198..914781,914858..>915401))	Acanthamoeba castellanii str. Neff	14922047
ACA1_284270	mRNA	ACA1_284270	NW_004457586.1	915538	916840	R	ACA1_284270	complement(join(<915538..915648,916263..916304,916394..916466,916557..916705,916793..>916840))	Acanthamoeba castellanii str. Neff	14922048
ACA1_284380	mRNA	ACA1_284380	NW_004457586.1	917010	917908	D	ACA1_284380	join(<917010..917151,917217..917486,917570..917677,917772..>917908)	Acanthamoeba castellanii str. Neff	14922049
ACA1_284500	mRNA	ACA1_284500	NW_004457586.1	923771	926448	D	ACA1_284500	join(<923771..924379,924516..924624,924841..924897,925059..925219,925301..925460,925590..925673,925772..925890,925981..926054,926127..>926448)	Acanthamoeba castellanii str. Neff	14922051
ACA1_284510	mRNA	ACA1_284510	NW_004457586.1	926760	928827	R	ACA1_284510	complement(join(<926760..927001,927022..927171,927256..927319,927429..927525,927603..927661,927737..927832,927902..928006,928089..928250,928345..928454,928516..928696,928798..>928827))	Acanthamoeba castellanii str. Neff	14922052
ACA1_284620	mRNA	ACA1_284620	NW_004457586.1	929255	930111	D	ACA1_284620	join(<929255..929446,929527..929643,929669..929849,929894..>930111)	Acanthamoeba castellanii str. Neff	14922053
ACA1_284730	mRNA	ACA1_284730	NW_004457586.1	932618	934058	R	ACA1_284730	complement(join(<932618..932646,932720..932923,932944..933093,933172..933235,933345..933441,933519..933577,933659..933754,933822..933926,934008..>934058))	Acanthamoeba castellanii str. Neff	14922054
ACA1_284840	mRNA	ACA1_284840	NW_004457586.1	934537	935955	D	ACA1_284840	join(<934537..934614,934798..934909,934964..935045,935204..935281,935387..935578,935703..>935955)	Acanthamoeba castellanii str. Neff	14922055
ACA1_284850	mRNA	ACA1_284850	NW_004457586.1	936651	938931	R	ACA1_284850	complement(join(<936651..937064,937181..937208,937354..937535,937637..937762,937899..938525,938599..>938931))	Acanthamoeba castellanii str. Neff	14922056
ACA1_285060	mRNA	ACA1_285060	NW_004457586.1	941132	942187	R	ACA1_285060	complement(join(<941132..941159,941257..941337,941393..941521,941586..941764,941825..941920,941992..942076,942147..>942187))	Acanthamoeba castellanii str. Neff	14922057
ACA1_285170	mRNA	ACA1_285170	NW_004457586.1	942319	944184	D	ACA1_285170	join(<942319..942389,942497..942598,942697..942778,943005..943084,943395..943472,943585..943776,943869..>944184)	Acanthamoeba castellanii str. Neff	14922058
ACA1_285180	mRNA	ACA1_285180	NW_004457586.1	945627	947308	D	ACA1_285180	join(<945627..945719,945887..946112,946303..946696,946770..946872,946940..946978,947037..947081,947150..>947308)	Acanthamoeba castellanii str. Neff	14922059
ACA1_285190	mRNA	ACA1_285190	NW_004457586.1	949200	953195	R	ACA1_285190	complement(join(<949200..949931,950029..950597,950662..950770,950843..950974,951047..951224,951297..951377,951432..951560,951634..951812,951880..951975,952047..952131,952202..952342,952414..952571,952635..952807,952906..953022,953075..>953195))	Acanthamoeba castellanii str. Neff	14922060
ACA1_285200	mRNA	ACA1_285200	NW_004457586.1	953566	957723	R	ACA1_285200	complement(join(<953566..954204,954288..954883,954999..955236,955322..955499,955584..955664,955743..955871,956025..956203,956289..956384,956480..956564,956657..956797,956867..957024,957101..957273,957360..957476,957591..>957723))	Acanthamoeba castellanii str. Neff	14922061
ACA1_285210	mRNA	ACA1_285210	NW_004457586.1	958392	961552	R	ACA1_285210	complement(join(<958392..958466,958589..958665,958742..958937,959064..959155,959231..959360,959466..959662,959766..959902,959996..960228,960313..960452,960585..960693,960827..960916,961061..961182,961326..961396,961491..>961552))	Acanthamoeba castellanii str. Neff	14922062
ACA1_285220	mRNA	ACA1_285220	NW_004457586.1	961641	963622	D	ACA1_285220	join(<961641..961649,961768..961878,961994..962563,962697..962768,962832..962901,963017..963136,963223..963345,963445..963499,963607..>963622)	Acanthamoeba castellanii str. Neff	14922063
ACA1_285330	mRNA	ACA1_285330	NW_004457586.1	965590	966021	R	ACA1_285330	complement(<965590..>966021)	Acanthamoeba castellanii str. Neff	14922064
ACA1_285340	mRNA	ACA1_285340	NW_004457586.1	966541	967691	R	ACA1_285340	complement(join(<966541..966572,966670..966892,967035..967120,967211..967347,967450..967531,967607..>967691))	Acanthamoeba castellanii str. Neff	14922065
ACA1_285450	mRNA	ACA1_285450	NW_004457586.1	967826	968812	R	ACA1_285450	complement(join(<967826..967989,968115..968231,968341..968477,968564..968645,968716..>968812))	Acanthamoeba castellanii str. Neff	14922066
ACA1_285460	mRNA	ACA1_285460	NW_004457586.1	970305	971226	D	ACA1_285460	join(<970305..970400,970480..>971226)	Acanthamoeba castellanii str. Neff	14922067
ACA1_285470	mRNA	ACA1_285470	NW_004457586.1	971974	974779	D	ACA1_285470	join(<971974..972666,972699..973059,973197..973359,973534..973834,973891..974043,974127..974432,974540..>974779)	Acanthamoeba castellanii str. Neff	14922068
ACA1_285480	mRNA	ACA1_285480	NW_004457586.1	975083	977526	R	ACA1_285480	complement(join(<975083..975126,975212..975353,975438..975554,975648..975794,975876..976145,976263..976426,976529..976663,976725..>977526))	Acanthamoeba castellanii str. Neff	14922069
ACA1_285490	mRNA	ACA1_285490	NW_004457586.1	977705	979776	R	ACA1_285490	complement(join(<977705..977785,977859..977949,978054..978115,978237..978368,978462..978589,978694..978850,978955..979087,979184..979560,979615..>979776))	Acanthamoeba castellanii str. Neff	14922070
ACA1_285500	mRNA	ACA1_285500	NW_004457586.1	980311	981138	D	ACA1_285500	join(<980311..980518,980609..980844,980859..980904,981035..>981138)	Acanthamoeba castellanii str. Neff	14922071
ACA1_285510	mRNA	ACA1_285510	NW_004457586.1	982164	983403	R	ACA1_285510	complement(join(<982164..982184,982343..982540,982595..982957,982999..>983403))	Acanthamoeba castellanii str. Neff	14922072
ACA1_285520	mRNA	ACA1_285520	NW_004457586.1	984048	984719	R	ACA1_285520	complement(join(<984048..984350,984537..>984719))	Acanthamoeba castellanii str. Neff	14922073
ACA1_285530	mRNA	ACA1_285530	NW_004457586.1	986562	986897	R	ACA1_285530	complement(join(<986562..986642,986676..>986897))	Acanthamoeba castellanii str. Neff	14922074
ACA1_285540	mRNA	ACA1_285540	NW_004457586.1	989430	995588	R	ACA1_285540	complement(join(<989430..990208,990280..990418,990493..990653,990745..991050,991119..991409,991478..991795,991867..992201,992295..992445,992516..992689,992794..992904,992982..993245,993336..993579,993669..993737,993807..993875,993963..994031,994109..994249,994343..994483,994580..994717,994809..994880,994949..995017,995093..995170,995295..995351,995424..>995588))	Acanthamoeba castellanii str. Neff	14922075
ACA1_285550	mRNA	ACA1_285550	NW_004457586.1	996160	1002181	R	ACA1_285550	complement(join(<996160..996398,996483..996735,996824..997526,997620..997709,997792..997947,998067..998156,998230..998383,998524..998692,998802..998897,998989..999068,999323..999446,999518..999664,999756..1000406,1000482..1001137,1001242..>1002181))	Acanthamoeba castellanii str. Neff	14922076
ACA1_285560	mRNA	ACA1_285560	NW_004457586.1	1003176	1005834	D	ACA1_285560	join(<1003176..1003203,1003276..1003683,1003747..1003823,1003898..1003988,1004082..1004185,1004252..1004422,1004491..1004644,1004731..1004870,1004944..1005019,1005084..1005191,1005257..1005312,1005410..1005516,1005615..1005645,1005709..>1005834)	Acanthamoeba castellanii str. Neff	14922077
ACA1_285570	mRNA	ACA1_285570	NW_004457586.1	1006155	1008098	D	ACA1_285570	join(<1006155..1006208,1006331..1006501,1006625..1006693,1006806..1006888,1007022..1007169,1007270..1007361,1007444..1007480,1007697..1007810,1007949..>1008098)	Acanthamoeba castellanii str. Neff	14922078
ACA1_285580	mRNA	ACA1_285580	NW_004457586.1	1008597	1008977	D	ACA1_285580	<1008597..>1008977	Acanthamoeba castellanii str. Neff	14922079
ACA1_285590	mRNA	ACA1_285590	NW_004457586.1	1009207	1009920	R	ACA1_285590	complement(join(<1009207..1009531,1009543..1009611,1009730..>1009920))	Acanthamoeba castellanii str. Neff	14922080
ACA1_285600	mRNA	ACA1_285600	NW_004457586.1	1010080	1010754	D	ACA1_285600	join(<1010080..1010149,1010378..1010483,1010679..>1010754)	Acanthamoeba castellanii str. Neff	14922081
ACA1_285610	mRNA	ACA1_285610	NW_004457586.1	1011434	1013742	R	ACA1_285610	complement(join(<1011434..1011759,1011889..1012051,1012238..1012337,1012479..1012687,1012793..1012951,1013071..1013306,1013469..>1013742))	Acanthamoeba castellanii str. Neff	14922082
ACA1_285620	mRNA	ACA1_285620	NW_004457586.1	1013863	1015744	R	ACA1_285620	complement(join(<1013863..1014026,1014113..1014271,1014380..1014583,1014639..1014782,1014906..1015019,1015096..1015254,1015332..1015490,1015594..>1015744))	Acanthamoeba castellanii str. Neff	14922083
ACA1_285630	mRNA	ACA1_285630	NW_004457586.1	1015884	1016643	D	ACA1_285630	join(<1015884..1015962,1016057..1016067,1016156..1016244,1016354..1016482,1016520..>1016643)	Acanthamoeba castellanii str. Neff	14922084
ACA1_285640	mRNA	ACA1_285640	NW_004457586.1	1016873	1018701	D	ACA1_285640	join(<1016873..1016978,1017053..1017126,1017188..1017277,1017453..1017579,1017687..1017789,1017909..1017974,1018120..1018298,1018387..1018461,1018583..>1018701)	Acanthamoeba castellanii str. Neff	14922085
ACA1_285650	mRNA	ACA1_285650	NW_004457586.1	1018807	1020498	R	ACA1_285650	complement(join(<1018807..1018945,1019052..1019584,1019665..>1020498))	Acanthamoeba castellanii str. Neff	14922086
ACA1_285660	mRNA	ACA1_285660	NW_004457586.1	1021099	1023338	R	ACA1_285660	complement(join(<1021099..1021112,1021153..1021497,1021542..1022538,1022670..>1023338))	Acanthamoeba castellanii str. Neff	14922087
ACA1_285670	mRNA	ACA1_285670	NW_004457586.1	1023843	1025012	R	ACA1_285670	complement(join(<1023843..1024656,1024721..1024823,1024949..>1025012))	Acanthamoeba castellanii str. Neff	14922088
ACA1_285680	mRNA	ACA1_285680	NW_004457586.1	1025180	1026415	D	ACA1_285680	join(<1025180..1025513,1025580..1025869,1025936..1026129,1026193..>1026415)	Acanthamoeba castellanii str. Neff	14922089
ACA1_285800	mRNA	ACA1_285800	NW_004457586.1	1027564	1027800	R	ACA1_285800	complement(<1027564..>1027800)	Acanthamoeba castellanii str. Neff	14922091
ACA1_285910	mRNA	ACA1_285910	NW_004457586.1	1028141	1028359	D	ACA1_285910	<1028141..>1028359	Acanthamoeba castellanii str. Neff	14922092
ACA1_286130	mRNA	ACA1_286130	NW_004457586.1	1032667	1037745	R	ACA1_286130	complement(join(<1032667..1032950,1033012..1033216,1033323..1033496,1033632..1033838,1033952..1034166,1034239..1034422,1034493..1034614,1034723..1034905,1035011..1035104,1035182..1035296,1035353..1035464,1035573..1035687,1035788..1036200,1036318..1036523,1036589..1036755,1036834..1036910,1036980..>1037745))	Acanthamoeba castellanii str. Neff	14922094
ACA1_286140	mRNA	ACA1_286140	NW_004457586.1	1038654	1040617	D	ACA1_286140	join(<1038654..1038943,1039221..1039310,1039412..1039505,1039607..1039687,1039794..1039841,1039933..1040055,1040158..1040256,1040369..>1040617)	Acanthamoeba castellanii str. Neff	14922095
ACA1_286150	mRNA	ACA1_286150	NW_004457586.1	1041084	1042876	D	ACA1_286150	join(<1041084..1041516,1041637..1041869,1041907..1042033,1042134..1042252,1042344..1042612,1042753..>1042876)	Acanthamoeba castellanii str. Neff	14922096
ACA1_286170	mRNA	ACA1_286170	NW_004457586.1	1049143	1052890	D	ACA1_286170	join(<1049143..1049364,1049511..1049621,1049723..1049816,1049935..1050033,1050155..1050268,1050356..1050451,1050548..1050677,1050771..1050848,1050953..1051043,1051109..1051206,1051279..1051593,1051713..1051777,1051857..1051931,1052020..1052115,1052244..1052393,1052511..1052730,1052836..>1052890)	Acanthamoeba castellanii str. Neff	14922098
ACA1_286180	mRNA	ACA1_286180	NW_004457586.1	1053297	1054303	R	ACA1_286180	complement(join(<1053297..1053499,1053573..1053679,1053777..1053902,1053993..1054056,1054123..>1054303))	Acanthamoeba castellanii str. Neff	14922099
ACA1_286390	mRNA	ACA1_286390	NW_004457586.1	1059563	1060068	D	ACA1_286390	join(<1059563..1060013,1060058..>1060068)	Acanthamoeba castellanii str. Neff	14922100
ACA1_286600	mRNA	ACA1_286600	NW_004457586.1	1068059	1075305	R	ACA1_286600	complement(join(<1068059..1069933,1070071..1071516,1071581..1072354,1072432..1072620,1072720..1072939,1073029..1073242,1073341..1073757,1073834..1073984,1074566..1075096,1075183..>1075305))	Acanthamoeba castellanii str. Neff	14922101
ACA1_052170	mRNA	ACA1_052170	NW_004457584.1	104	487	D	ACA1_052170	join(<104..211,320..>487)	Acanthamoeba castellanii str. Neff	14921684
ACA1_052180	mRNA	ACA1_052180	NW_004457584.1	595	2377	R	ACA1_052180	complement(join(<595..636,712..784,858..967,1113..1220,1355..1454,1575..1647,1813..1895,2015..2126,2260..>2377))	Acanthamoeba castellanii str. Neff	14921392
ACA1_052190	mRNA	ACA1_052190	NW_004457584.1	2532	5983	R	ACA1_052190	complement(join(<2532..2920,2994..4121,4206..4359,4459..4563,4644..4747,4880..5007,5117..5216,5308..5458,5554..5696,5800..>5983))	Acanthamoeba castellanii str. Neff	14921393
ACA1_052200	mRNA	ACA1_052200	NW_004457584.1	6139	7991	R	ACA1_052200	complement(join(<6139..6267,6389..6568,6689..6742,6820..6942,7065..7183,7317..7372,7450..7496,7621..7704,7800..>7991))	Acanthamoeba castellanii str. Neff	14921394
ACA1_052210	mRNA	ACA1_052210	NW_004457584.1	8564	10410	R	ACA1_052210	complement(join(<8564..8769,8889..9018,9108..9188,9282..9374,9486..9575,9654..9728,9822..9896,9985..10134,10219..>10410))	Acanthamoeba castellanii str. Neff	14921395
ACA1_052220	mRNA	ACA1_052220	NW_004457584.1	10652	14110	R	ACA1_052220	complement(join(<10652..10806,10901..10968,11097..11557,11623..11998,12084..>14110))	Acanthamoeba castellanii str. Neff	14921396
ACA1_052230	mRNA	ACA1_052230	NW_004457584.1	14671	15264	R	ACA1_052230	complement(<14671..>15264)	Acanthamoeba castellanii str. Neff	14921397
ACA1_052250	mRNA	ACA1_052250	NW_004457584.1	20000	23871	D	ACA1_052250	join(<20000..20174,20261..20330,20414..20585,20730..20851,20976..21123,21249..21364,21466..21583,21696..22003,22080..22176,22317..22418,22521..22613,22763..22898,23007..23197,23301..23385,23477..23700,23773..>23871)	Acanthamoeba castellanii str. Neff	14921399
ACA1_052260	mRNA	ACA1_052260	NW_004457584.1	23988	28139	R	ACA1_052260	complement(join(<23988..24058,24167..24301,24408..24689,24764..24889,25024..25149,25275..25437,25545..25678,25767..25901,26125..26199,26369..26440,26533..26607,26765..26830,26975..27136,27238..27351,27490..27661,27771..>28139))	Acanthamoeba castellanii str. Neff	14921400
ACA1_052270	mRNA	ACA1_052270	NW_004457584.1	28461	29724	D	ACA1_052270	join(<28461..28877,28965..29027,29099..29179,29332..>29724)	Acanthamoeba castellanii str. Neff	14921401
ACA1_052280	mRNA	ACA1_052280	NW_004457584.1	30281	32804	D	ACA1_052280	join(<30281..30345,30620..31354,31508..31607,31715..31800,31924..32038,32310..>32804)	Acanthamoeba castellanii str. Neff	14921402
ACA1_052290	mRNA	ACA1_052290	NW_004457584.1	33164	35711	D	ACA1_052290	join(<33164..33252,33473..34585,34756..34855,34941..35026,35120..>35711)	Acanthamoeba castellanii str. Neff	14921403
ACA1_052300	mRNA	ACA1_052300	NW_004457584.1	35792	40422	R	ACA1_052300	complement(join(<35792..36244,36334..36448,36583..36665,36767..36869,37005..37823,38249..38325,38406..38510,38543..38641,38738..38852,38967..39049,39147..39246,39327..39468,39676..40018,40333..>40422))	Acanthamoeba castellanii str. Neff	14921404
ACA1_052310	mRNA	ACA1_052310	NW_004457584.1	40958	41447	D	ACA1_052310	join(<40958..41035,41144..41239,41325..>41447)	Acanthamoeba castellanii str. Neff	14921405
ACA1_052320	mRNA	ACA1_052320	NW_004457584.1	41557	43327	R	ACA1_052320	complement(join(<41557..41825,41910..42045,42149..42241,42337..42476,42550..42672,42858..42980,43069..43214,43281..>43327))	Acanthamoeba castellanii str. Neff	14921406
ACA1_052330	mRNA	ACA1_052330	NW_004457584.1	43867	48636	R	ACA1_052330	complement(join(<43867..44023,44207..44692,44795..45679,45878..45983,46098..46263,46379..46521,46601..46709,46905..47071,47151..47253,47387..47553,47622..47885,47988..48098,48228..48288,48607..>48636))	Acanthamoeba castellanii str. Neff	14921407
ACA1_052340	mRNA	ACA1_052340	NW_004457584.1	49156	51134	D	ACA1_052340	join(<49156..49168,49492..49637,49696..49760,49875..49995,50074..50433,50569..50871,50988..>51134)	Acanthamoeba castellanii str. Neff	14921408
ACA1_052350	mRNA	ACA1_052350	NW_004457584.1	51303	52059	R	ACA1_052350	complement(join(<51303..51380,51448..51561,51636..51731,51805..51863,51934..51964,52033..>52059))	Acanthamoeba castellanii str. Neff	14921409
ACA1_052360	mRNA	ACA1_052360	NW_004457584.1	52327	53094	D	ACA1_052360	<52327..>53094	Acanthamoeba castellanii str. Neff	14921410
ACA1_052370	mRNA	ACA1_052370	NW_004457584.1	53389	54042	D	ACA1_052370	<53389..>54042	Acanthamoeba castellanii str. Neff	14921411
ACA1_052390	mRNA	ACA1_052390	NW_004457584.1	56756	60510	R	ACA1_052390	complement(join(<56756..56958,57063..57127,57201..57280,57443..57718,57799..57920,58004..58071,58154..58245,58318..58368,58440..58528,58625..58741,58846..58993,59320..59427,59592..59724,59905..59974,60181..60265,60412..>60510))	Acanthamoeba castellanii str. Neff	14921413
ACA1_052400	mRNA	ACA1_052400	NW_004457584.1	60743	65560	D	ACA1_052400	join(<60743..60772,60849..60917,61069..61137,61293..61447,61551..61612,61735..63602,63688..63891,64017..64211,64302..64394,64502..64597,64688..64794,64984..65132,65227..65347,65488..>65560)	Acanthamoeba castellanii str. Neff	14921414
ACA1_052420	mRNA	ACA1_052420	NW_004457584.1	67467	70127	D	ACA1_052420	join(<67467..67673,67754..67918,67956..68510,68550..69795,69826..>70127)	Acanthamoeba castellanii str. Neff	14921416
ACA1_052430	mRNA	ACA1_052430	NW_004457584.1	70600	75567	R	ACA1_052430	complement(join(<70600..70643,70724..71322,71419..71615,71681..72182,72265..72521,72596..73111,73228..73444,73489..73970,73997..74068,74161..74354,74397..74541,74662..74769,75025..75476,75540..>75567))	Acanthamoeba castellanii str. Neff	14921417
ACA1_052440	mRNA	ACA1_052440	NW_004457584.1	75748	77585	R	ACA1_052440	complement(join(<75748..75891,75962..76063,76146..76734,76798..77175,77256..77367,77459..>77585))	Acanthamoeba castellanii str. Neff	14921418
ACA1_052450	mRNA	ACA1_052450	NW_004457584.1	77718	78110	D	ACA1_052450	join(<77718..77846,77910..>78110)	Acanthamoeba castellanii str. Neff	14921419
ACA1_052460	mRNA	ACA1_052460	NW_004457584.1	78646	80832	D	ACA1_052460	join(<78646..78755,78854..80023,80091..80193,80338..80423,80541..80655,80731..>80832)	Acanthamoeba castellanii str. Neff	14921420
ACA1_052470	mRNA	ACA1_052470	NW_004457584.1	81224	82867	D	ACA1_052470	join(<81224..81460,81637..81864,81959..82072,82155..82312,82398..82527,82640..>82867)	Acanthamoeba castellanii str. Neff	14921421
ACA1_052480	mRNA	ACA1_052480	NW_004457584.1	82909	86428	R	ACA1_052480	complement(join(<82909..83111,83201..83729,83857..83982,84075..84277,84415..84542,84678..84804,84898..85205,85363..85849,85953..86087,86142..86279,86356..>86428))	Acanthamoeba castellanii str. Neff	14921422
ACA1_052490	mRNA	ACA1_052490	NW_004457584.1	86842	87798	D	ACA1_052490	join(<86842..87096,87307..>87798)	Acanthamoeba castellanii str. Neff	14921423
ACA1_052500	mRNA	ACA1_052500	NW_004457584.1	87950	91929	R	ACA1_052500	complement(join(<87950..88509,88556..88735,88835..88927,89037..89125,89283..89382,89554..89907,90023..90683,90834..91396,91654..91700,91886..>91929))	Acanthamoeba castellanii str. Neff	14921424
ACA1_052510	mRNA	ACA1_052510	NW_004457584.1	92128	93747	D	ACA1_052510	join(<92128..92273,92402..92523,92613..92676,92782..92876,93004..93043,93149..93252,93334..93398,93516..93617,93697..>93747)	Acanthamoeba castellanii str. Neff	14921425
ACA1_052520	mRNA	ACA1_052520	NW_004457584.1	93958	95999	D	ACA1_052520	join(<93958..93997,94181..94237,94322..94392,94455..94516,94589..94709,95099..95202,95322..95389,95485..95581,95678..>95999)	Acanthamoeba castellanii str. Neff	14921426
ACA1_052530	mRNA	ACA1_052530	NW_004457584.1	96137	99799	R	ACA1_052530	complement(join(<96137..96342,96429..96810,96918..97046,97152..97367,97522..97652,97786..97851,98060..98121,98207..98333,98418..98728,98805..99120,99281..99385,99499..99597,99727..>99799))	Acanthamoeba castellanii str. Neff	14921427
ACA1_052540	mRNA	ACA1_052540	NW_004457584.1	100115	102514	R	ACA1_052540	complement(join(<100115..100291,100379..100538,100679..100758,101062..101138,101220..101314,101579..101756,101956..102029,102360..>102514))	Acanthamoeba castellanii str. Neff	14921428
ACA1_052550	mRNA	ACA1_052550	NW_004457584.1	102685	103230	D	ACA1_052550	<102685..>103230	Acanthamoeba castellanii str. Neff	14921429
ACA1_052560	mRNA	ACA1_052560	NW_004457584.1	104498	105265	D	ACA1_052560	<104498..>105265	Acanthamoeba castellanii str. Neff	14921430
ACA1_052570	mRNA	ACA1_052570	NW_004457584.1	105775	107136	D	ACA1_052570	join(<105775..105936,106009..106183,106293..106472,106588..106796,106876..>107136)	Acanthamoeba castellanii str. Neff	14921431
ACA1_052580	mRNA	ACA1_052580	NW_004457584.1	107208	116843	R	ACA1_052580	complement(join(<107208..107408,107517..107597,107691..107866,107930..108029,108254..108440,108616..108680,108778..108906,109003..109103,109193..109423,109501..109554,109632..109739,109822..109981,110049..110267,110400..110777,110867..111004,111153..111379,111460..111544,111628..111771,111867..112495,112592..112751,112863..113003,113089..113226,113331..113471,113541..115103,115186..115485,115574..115714,115781..115961,116057..116143,116219..116285,116388..116518,116596..116660,116736..>116843))	Acanthamoeba castellanii str. Neff	14921432
ACA1_052590	mRNA	ACA1_052590	NW_004457584.1	117106	118051	D	ACA1_052590	join(<117106..117204,117290..117370,117430..117536,117596..117686,117830..117899,117921..>118051)	Acanthamoeba castellanii str. Neff	14921433
ACA1_052600	mRNA	ACA1_052600	NW_004457584.1	118770	122199	D	ACA1_052600	join(<118770..118784,118884..119046,119120..119270,119354..119427,119496..119618,119727..119878,119978..120058,120149..120213,120352..120412,120498..120639,120720..120844,120985..121101,121232..121348,121535..121647,121713..121734,121900..>122199)	Acanthamoeba castellanii str. Neff	14921434
ACA1_052610	mRNA	ACA1_052610	NW_004457584.1	122393	123587	D	ACA1_052610	join(<122393..122450,122595..122743,122849..122995,123116..123358,123438..>123587)	Acanthamoeba castellanii str. Neff	14921435
ACA1_052620	mRNA	ACA1_052620	NW_004457584.1	133304	136846	R	ACA1_052620	complement(join(<133304..133503,133629..134010,134149..134298,134410..134529,134600..134713,134828..134934,135229..135290,135443..135569,135676..136308,136402..136512,136609..136698,136768..>136846))	Acanthamoeba castellanii str. Neff	14921436
ACA1_052630	mRNA	ACA1_052630	NW_004457584.1	137251	138646	R	ACA1_052630	complement(join(<137251..137334,137453..137542,137676..137805,137895..138180,138310..>138646))	Acanthamoeba castellanii str. Neff	14921437
ACA1_052640	mRNA	ACA1_052640	NW_004457584.1	139290	142256	D	ACA1_052640	join(<139290..139467,139578..139742,139904..139980,140064..140159,140260..140358,140445..140658,140742..140813,140949..141079,141205..141400,141487..141602,141686..141983,142078..>142256)	Acanthamoeba castellanii str. Neff	14921438
ACA1_052650	mRNA	ACA1_052650	NW_004457584.1	142382	143398	R	ACA1_052650	complement(join(<142382..142623,142693..>143398))	Acanthamoeba castellanii str. Neff	14921439
ACA1_052660	mRNA	ACA1_052660	NW_004457584.1	143590	143868	D	ACA1_052660	<143590..>143868	Acanthamoeba castellanii str. Neff	14921440
ACA1_052670	mRNA	ACA1_052670	NW_004457584.1	144584	149974	D	ACA1_052670	join(<144584..144809,145223..146036,146139..146619,146662..146782,146853..>149974)	Acanthamoeba castellanii str. Neff	14921441
ACA1_052680	mRNA	ACA1_052680	NW_004457584.1	150232	151816	R	ACA1_052680	complement(join(<150232..150477,150556..150836,150989..151099,151276..151428,151528..>151816))	Acanthamoeba castellanii str. Neff	14921442
ACA1_052690	mRNA	ACA1_052690	NW_004457584.1	152130	155208	D	ACA1_052690	join(<152130..152920,152988..153115,153274..153465,153604..153821,154031..154150,154239..154320,154403..154489,154583..154705,154913..>155208)	Acanthamoeba castellanii str. Neff	14921443
ACA1_052710	mRNA	ACA1_052710	NW_004457584.1	157295	158448	D	ACA1_052710	join(<157295..157858,158040..158163,158303..>158448)	Acanthamoeba castellanii str. Neff	14921445
ACA1_052720	mRNA	ACA1_052720	NW_004457584.1	158799	164177	D	ACA1_052720	join(<158799..158958,159122..159199,159288..159350,159460..159710,159813..159998,160070..160200,160294..160463,160547..160709,160885..160966,161078..161269,161476..161730,161824..161905,162232..162399,162496..162593,162693..162785,162879..162935,163225..163387,163493..163823,163838..>164177)	Acanthamoeba castellanii str. Neff	14921446
ACA1_052730	mRNA	ACA1_052730	NW_004457584.1	164915	166951	R	ACA1_052730	complement(join(<164915..165310,165384..165441,165539..165727,165836..166008,166107..166288,166363..166580,166707..>166951))	Acanthamoeba castellanii str. Neff	14921447
ACA1_052740	mRNA	ACA1_052740	NW_004457584.1	167565	170818	D	ACA1_052740	join(<167565..168324,168481..168602,168700..168825,168976..169089,169192..169310,169445..169532,169632..169724,169859..170000,170102..170254,170333..170410,170488..170553,170673..>170818)	Acanthamoeba castellanii str. Neff	14921448
ACA1_052750	mRNA	ACA1_052750	NW_004457584.1	171164	173644	D	ACA1_052750	join(<171164..171695,171862..173376,173478..>173644)	Acanthamoeba castellanii str. Neff	14921449
ACA1_052760	mRNA	ACA1_052760	NW_004457584.1	174269	175474	R	ACA1_052760	complement(join(<174269..174344,174406..174538,174593..174752,174844..175142,175176..175274,175471..>175474))	Acanthamoeba castellanii str. Neff	14921450
ACA1_052770	mRNA	ACA1_052770	NW_004457584.1	175686	177136	R	ACA1_052770	complement(join(<175686..176437,176539..>177136))	Acanthamoeba castellanii str. Neff	14921451
ACA1_052780	mRNA	ACA1_052780	NW_004457584.1	177329	179919	R	ACA1_052780	complement(join(<177329..177671,177953..178097,178174..178266,178366..178501,178588..178771,178865..179037,179140..179256,179341..>179919))	Acanthamoeba castellanii str. Neff	14921452
ACA1_052790	mRNA	ACA1_052790	NW_004457584.1	180502	183542	R	ACA1_052790	complement(join(<180502..181806,181941..182621,182748..183305,183441..>183542))	Acanthamoeba castellanii str. Neff	14921453
ACA1_052800	mRNA	ACA1_052800	NW_004457584.1	184036	184749	D	ACA1_052800	<184036..>184749	Acanthamoeba castellanii str. Neff	14921454
ACA1_052810	mRNA	ACA1_052810	NW_004457584.1	184969	188125	R	ACA1_052810	complement(join(<184969..185300,185453..185525,185682..185756,185817..185891,185995..186098,186248..186416,186673..186758,186872..187029,187178..187343,187477..>188125))	Acanthamoeba castellanii str. Neff	14921455
ACA1_052820	mRNA	ACA1_052820	NW_004457584.1	188377	189853	R	ACA1_052820	complement(join(<188377..188631,188736..188844,188918..189025,189127..189265,189334..189553,189610..189684,189818..>189853))	Acanthamoeba castellanii str. Neff	14921456
ACA1_052830	mRNA	ACA1_052830	NW_004457584.1	189965	196707	R	ACA1_052830	complement(join(<189965..190176,190315..190382,190509..190599,190669..190761,190839..191050,191168..191380,191496..191645,191730..191873,192089..192203,192307..192375,192492..192686,192767..192935,193055..193272,193368..193460,193559..193715,193834..193943,194048..194212,194304..194450,194523..194643,194716..194849,194987..195170,195248..195473,195577..195779,195872..195976,196084..196220,196294..196319,196418..>196707))	Acanthamoeba castellanii str. Neff	14921457
ACA1_052840	mRNA	ACA1_052840	NW_004457584.1	197351	199115	D	ACA1_052840	join(<197351..197652,197740..198048,198146..198371,198405..198638,198660..>199115)	Acanthamoeba castellanii str. Neff	14921458
ACA1_052860	mRNA	ACA1_052860	NW_004457584.1	201153	202325	R	ACA1_052860	complement(join(<201153..201658,201761..201877,202007..>202325))	Acanthamoeba castellanii str. Neff	14921460
ACA1_052870	mRNA	ACA1_052870	NW_004457584.1	202731	204662	D	ACA1_052870	join(<202731..202967,203039..203137,203206..203263,203356..203434,203539..203626,203641..203787,203910..204078,204193..>204662)	Acanthamoeba castellanii str. Neff	14921461
ACA1_052880	mRNA	ACA1_052880	NW_004457584.1	205151	205504	D	ACA1_052880	<205151..>205504	Acanthamoeba castellanii str. Neff	14921462
ACA1_052890	mRNA	ACA1_052890	NW_004457584.1	205970	207219	D	ACA1_052890	join(<205970..205986,206406..206493,206508..206654,206774..206942,207057..>207219)	Acanthamoeba castellanii str. Neff	14921463
ACA1_053000	mRNA	ACA1_053000	NW_004457584.1	207829	208520	R	ACA1_053000	complement(join(<207829..207992,208109..208283,208437..>208520))	Acanthamoeba castellanii str. Neff	14921464
ACA1_053110	mRNA	ACA1_053110	NW_004457584.1	211613	218522	R	ACA1_053110	complement(join(<211613..211624,212785..212822,213098..213252,213378..214099,214182..214587,214690..215075,215103..216309,216416..216562,216664..216824,216978..217550,217651..217726,217876..218054,218200..218328,218394..>218522))	Acanthamoeba castellanii str. Neff	14921465
ACA1_053220	mRNA	ACA1_053220	NW_004457584.1	218826	226906	D	ACA1_053220	join(<218826..218882,218941..218973,218998..219180,219245..219489,219623..219755,219838..219997,220076..220170,220247..220456,220550..220672,220766..220887,220971..221525,221613..221844,221925..222144,222235..222333,222419..222585,222802..223002,223068..223139,223313..223979,224107..224378,224516..224645,224720..225160,225287..225564,225673..225822,225936..226190,226266..226586,226691..>226906)	Acanthamoeba castellanii str. Neff	14921466
ACA1_053230	mRNA	ACA1_053230	NW_004457584.1	226998	228628	R	ACA1_053230	complement(join(<226998..227147,227647..227808,227918..228178,228332..228436,228572..>228628))	Acanthamoeba castellanii str. Neff	14921467
ACA1_053240	mRNA	ACA1_053240	NW_004457584.1	229312	230931	D	ACA1_053240	join(<229312..229367,229450..229650,229731..229798,229910..230207,230301..>230931)	Acanthamoeba castellanii str. Neff	14921468
ACA1_053250	mRNA	ACA1_053250	NW_004457584.1	231002	236555	R	ACA1_053250	complement(join(<231002..231258,231395..231462,231618..231983,232112..232652,232771..232885,232966..233235,233348..233460,233656..233893,234031..234129,234265..234370,234485..234612,234702..234737,234890..234979,235068..235141,235255..235399,235520..235630,235803..235862,235969..236039,236130..236218,236294..236352,236457..>236555))	Acanthamoeba castellanii str. Neff	14921469
ACA1_053260	mRNA	ACA1_053260	NW_004457584.1	237032	238240	R	ACA1_053260	complement(join(<237032..237105,237176..237364,237485..237615,237690..237781,237844..238000,238086..>238240))	Acanthamoeba castellanii str. Neff	14921470
ACA1_053270	mRNA	ACA1_053270	NW_004457584.1	239022	241420	D	ACA1_053270	join(<239022..239136,239223..239359,239474..239560,239651..239782,239856..240023,240087..240196,240305..240479,240551..>241420)	Acanthamoeba castellanii str. Neff	14921471
ACA1_053280	mRNA	ACA1_053280	NW_004457584.1	242158	249205	D	ACA1_053280	join(<242158..242211,242238..242448,242577..242797,242931..243612,243706..243821,243843..244439,244514..244606,244684..244788,244873..245244,245355..245455,245564..245789,245891..246020,246123..246382,246488..246611,246642..246658,246696..246790,246909..247185,247288..247473,247558..247781,247873..248077,248179..248289,248398..248607,248701..248833,248936..249087,249185..>249205)	Acanthamoeba castellanii str. Neff	14921472
ACA1_053290	mRNA	ACA1_053290	NW_004457584.1	249847	250573	D	ACA1_053290	join(<249847..249958,250105..250263,250341..>250573)	Acanthamoeba castellanii str. Neff	14921473
ACA1_053300	mRNA	ACA1_053300	NW_004457584.1	250857	253972	D	ACA1_053300	join(<250857..251035,251163..251406,251531..251788,251884..252034,252131..252246,252360..252494,252586..252766,252890..253660,253770..>253972)	Acanthamoeba castellanii str. Neff	14921474
ACA1_053310	mRNA	ACA1_053310	NW_004457584.1	254781	261613	D	ACA1_053310	join(<254781..254838,254931..255033,255110..255170,255270..255407,255484..255792,255944..256257,256329..256678,256782..257023,257179..257277,257371..257512,257619..257766,257855..258102,258172..258548,258681..258777,258880..260271,260289..260499,260587..260843,260915..261120,261215..>261613)	Acanthamoeba castellanii str. Neff	14921475
ACA1_053320	mRNA	ACA1_053320	NW_004457584.1	261703	263653	R	ACA1_053320	complement(join(<261703..261765,262161..262233,262494..262573,262666..262797,262890..263122,263210..263305,263382..263506,263580..>263653))	Acanthamoeba castellanii str. Neff	14921476
ACA1_053330	mRNA	ACA1_053330	NW_004457584.1	264257	264469	D	ACA1_053330	<264257..>264469	Acanthamoeba castellanii str. Neff	14921477
ACA1_053340	mRNA	ACA1_053340	NW_004457584.1	265031	267020	R	ACA1_053340	complement(join(<265031..265383,265475..265684,265767..265973,266112..266205,266358..266611,266674..266805,266876..>267020))	Acanthamoeba castellanii str. Neff	14921478
ACA1_053350	mRNA	ACA1_053350	NW_004457584.1	267257	268147	D	ACA1_053350	join(<267257..267571,267711..267829,267952..267998,268098..>268147)	Acanthamoeba castellanii str. Neff	14921479
ACA1_053360	mRNA	ACA1_053360	NW_004457584.1	268401	269946	D	ACA1_053360	join(<268401..268682,268851..268950,269095..269298,269384..269537,269626..269740,269821..>269946)	Acanthamoeba castellanii str. Neff	14921480
ACA1_053370	mRNA	ACA1_053370	NW_004457584.1	270115	272195	R	ACA1_053370	complement(join(<270115..270222,270306..270546,270705..270841,270959..271226,271352..271478,271620..271827,272010..>272195))	Acanthamoeba castellanii str. Neff	14921481
ACA1_053380	mRNA	ACA1_053380	NW_004457584.1	272471	273363	R	ACA1_053380	complement(join(<272471..272603,272677..272793,272858..272908,273118..273142,273309..>273363))	Acanthamoeba castellanii str. Neff	14921482
ACA1_053390	mRNA	ACA1_053390	NW_004457584.1	274330	275031	R	ACA1_053390	complement(join(<274330..274392,274455..274509,274568..274675,274735..274836,274907..>275031))	Acanthamoeba castellanii str. Neff	14921483
ACA1_053400	mRNA	ACA1_053400	NW_004457584.1	275312	277057	R	ACA1_053400	complement(join(<275312..275362,275467..275616,275704..275893,275969..276165,276256..276378,276499..276636,276735..276779,276872..>277057))	Acanthamoeba castellanii str. Neff	14921484
ACA1_053410	mRNA	ACA1_053410	NW_004457584.1	277359	278653	R	ACA1_053410	complement(join(<277359..277550,277621..277707,277784..277851,277975..>278653))	Acanthamoeba castellanii str. Neff	14921485
ACA1_053420	mRNA	ACA1_053420	NW_004457584.1	278769	279395	D	ACA1_053420	<278769..>279395	Acanthamoeba castellanii str. Neff	14921486
ACA1_053430	mRNA	ACA1_053430	NW_004457584.1	279537	280785	R	ACA1_053430	complement(join(<279537..279922,280042..280169,280301..280358,280476..>280785))	Acanthamoeba castellanii str. Neff	14921487
ACA1_053440	mRNA	ACA1_053440	NW_004457584.1	281997	283679	R	ACA1_053440	complement(join(<281997..282037,282123..282346,282832..283034,283133..283234,283345..283397,283477..283576,283593..>283679))	Acanthamoeba castellanii str. Neff	14921488
ACA1_053450	mRNA	ACA1_053450	NW_004457584.1	283855	284911	D	ACA1_053450	join(<283855..283962,284015..284140,284237..>284911)	Acanthamoeba castellanii str. Neff	14921489
ACA1_053470	mRNA	ACA1_053470	NW_004457584.1	286420	287216	R	ACA1_053470	complement(join(<286420..286488,286568..286750,286802..286885,287097..>287216))	Acanthamoeba castellanii str. Neff	14921491
ACA1_053480	mRNA	ACA1_053480	NW_004457584.1	287608	289374	D	ACA1_053480	join(<287608..287662,287764..287885,287961..288049,288192..288531,288621..288678,288747..288813,288913..289039,289135..>289374)	Acanthamoeba castellanii str. Neff	14921492
ACA1_053490	mRNA	ACA1_053490	NW_004457584.1	289658	291170	D	ACA1_053490	join(<289658..289759,289998..290101,290324..290384,290588..290677,290751..290831,290898..>291170)	Acanthamoeba castellanii str. Neff	14921493
ACA1_053600	mRNA	ACA1_053600	NW_004457584.1	291434	292774	R	ACA1_053600	complement(join(<291434..291544,291687..291796,291937..292001,292147..292316,292556..>292774))	Acanthamoeba castellanii str. Neff	14921494
ACA1_053610	mRNA	ACA1_053610	NW_004457584.1	292993	295459	D	ACA1_053610	join(<292993..293110,293265..293336,293517..293586,293776..293881,294000..294071,294231..294355,294482..294607,294766..294907,295060..295163,295327..>295459)	Acanthamoeba castellanii str. Neff	14921495
ACA1_053620	mRNA	ACA1_053620	NW_004457584.1	295807	297748	R	ACA1_053620	complement(join(<295807..295998,296121..296443,296660..296696,297015..297067,297169..>297748))	Acanthamoeba castellanii str. Neff	14921496
ACA1_053630	mRNA	ACA1_053630	NW_004457584.1	298032	301013	D	ACA1_053630	join(<298032..298086,298272..298352,298408..298618,298776..298870,299045..299146,299463..299551,299692..299886,300325..300359,300486..300555,300724..300813,300855..300886,300929..>301013)	Acanthamoeba castellanii str. Neff	14921497
ACA1_053640	mRNA	ACA1_053640	NW_004457584.1	301388	304942	D	ACA1_053640	<301388..>304942	Acanthamoeba castellanii str. Neff	14921498
ACA1_053650	mRNA	ACA1_053650	NW_004457584.1	305096	307323	R	ACA1_053650	complement(join(<305096..305296,305400..305583,305707..305816,305906..306143,306335..306416,306549..>307323))	Acanthamoeba castellanii str. Neff	14921499
ACA1_053660	mRNA	ACA1_053660	NW_004457584.1	308383	311572	R	ACA1_053660	complement(join(<308383..309631,309786..309954,310104..310213,310318..310694,310810..311081,311548..>311572))	Acanthamoeba castellanii str. Neff	14921500
ACA1_053670	mRNA	ACA1_053670	NW_004457584.1	311767	314662	D	ACA1_053670	join(<311767..311977,312104..312307,312458..312553,312683..312852,313001..313216,313412..313539,313720..313876,313997..>314662)	Acanthamoeba castellanii str. Neff	14921501
ACA1_053780	mRNA	ACA1_053780	NW_004457584.1	316701	320917	R	ACA1_053780	complement(join(<316701..316991,317074..317238,317381..317587,317715..317972,318104..318391,318549..319958,320135..320203,320348..320459,320537..320631,320693..>320917))	Acanthamoeba castellanii str. Neff	14921502
ACA1_053790	mRNA	ACA1_053790	NW_004457584.1	321022	325490	R	ACA1_053790	complement(join(<321022..321445,321510..321590,321644..323652,323882..324064,324160..324230,324447..324522,324670..324763,325010..325120,325331..325365,325428..>325490))	Acanthamoeba castellanii str. Neff	14921503
ACA1_053800	mRNA	ACA1_053800	NW_004457584.1	325839	330236	R	ACA1_053800	complement(join(<325839..326079,326304..326437,326641..326738,326808..326992,327148..327248,327334..327731,327889..328060,328203..328378,328535..328614,328748..328898,329031..329136,329317..329444,329539..329635,329834..329917,330012..330095,330132..>330236))	Acanthamoeba castellanii str. Neff	14921504
ACA1_053810	mRNA	ACA1_053810	NW_004457584.1	329504	330236	R	ACA1_053810	complement(join(<329504..329635,329834..329917,330012..330095,330132..>330236))	Acanthamoeba castellanii str. Neff	14921505
ACA1_053820	mRNA	ACA1_053820	NW_004457584.1	330429	333003	D	ACA1_053820	join(<330429..331125,331282..331451,331542..331583,331809..331924,332081..332238,332326..332594,332797..>333003)	Acanthamoeba castellanii str. Neff	14921506
ACA1_053830	mRNA	ACA1_053830	NW_004457584.1	333086	333712	D	ACA1_053830	join(<333086..333219,333251..333307,333387..333545,333652..>333712)	Acanthamoeba castellanii str. Neff	14921507
ACA1_053840	mRNA	ACA1_053840	NW_004457584.1	333588	334353	R	ACA1_053840	complement(join(<333588..333963,334110..334160,334283..>334353))	Acanthamoeba castellanii str. Neff	14921508
ACA1_053850	mRNA	ACA1_053850	NW_004457584.1	334750	335761	D	ACA1_053850	join(<334750..334939,335037..335121,335233..335465,335607..>335761)	Acanthamoeba castellanii str. Neff	14921509
ACA1_053860	mRNA	ACA1_053860	NW_004457584.1	336016	338219	R	ACA1_053860	complement(join(<336016..336044,336162..336476,336630..336852,336996..>338219))	Acanthamoeba castellanii str. Neff	14921510
ACA1_053870	mRNA	ACA1_053870	NW_004457584.1	338524	340164	D	ACA1_053870	join(<338524..338656,338798..339691,339821..340056,340102..>340164)	Acanthamoeba castellanii str. Neff	14921511
ACA1_053880	mRNA	ACA1_053880	NW_004457584.1	340228	341853	R	ACA1_053880	complement(join(<340228..341142,341279..341416,341551..>341853))	Acanthamoeba castellanii str. Neff	14921512
ACA1_053890	mRNA	ACA1_053890	NW_004457584.1	342049	345423	R	ACA1_053890	complement(join(<342049..342192,342309..342485,342588..342936,343029..343231,343334..343842,343926..344081,344208..344423,344551..344928,344997..345035,345111..345261,345379..>345423))	Acanthamoeba castellanii str. Neff	14921513
ACA1_053900	mRNA	ACA1_053900	NW_004457584.1	349329	350185	R	ACA1_053900	complement(join(<349329..349367,349450..349638,350147..>350185))	Acanthamoeba castellanii str. Neff	14921514
ACA1_053910	mRNA	ACA1_053910	NW_004457584.1	351655	355100	R	ACA1_053910	complement(join(<351655..351822,351920..352098,352236..352406,352497..352706,352797..352969,353051..353207,353323..353475,353611..353730,353814..353920,354010..354082,354223..354348,354462..354501,354620..354717,354857..>355100))	Acanthamoeba castellanii str. Neff	14921515
ACA1_053920	mRNA	ACA1_053920	NW_004457584.1	355213	356956	R	ACA1_053920	complement(join(<355213..355332,355364..355504,355622..355912,356019..356122,356245..356367,356497..>356956))	Acanthamoeba castellanii str. Neff	14921516
ACA1_053930	mRNA	ACA1_053930	NW_004457584.1	357067	357488	D	ACA1_053930	join(<357067..357202,357337..>357488)	Acanthamoeba castellanii str. Neff	14921517
ACA1_053940	mRNA	ACA1_053940	NW_004457584.1	357664	358661	R	ACA1_053940	complement(join(<357664..357912,358014..358233,358317..358433,358564..>358661))	Acanthamoeba castellanii str. Neff	14921518
ACA1_053950	mRNA	ACA1_053950	NW_004457584.1	358731	360099	R	ACA1_053950	complement(join(<358731..358867,359069..359130,359249..359279,359351..359446,359628..359683,359812..359893,359985..>360099))	Acanthamoeba castellanii str. Neff	14921519
ACA1_053960	mRNA	ACA1_053960	NW_004457584.1	360231	361371	R	ACA1_053960	complement(join(<360231..360416,360552..360685,360815..360924,361025..361078,361196..>361371))	Acanthamoeba castellanii str. Neff	14921520
ACA1_053970	mRNA	ACA1_053970	NW_004457584.1	362175	363830	D	ACA1_053970	join(<362175..362647,362717..>363830)	Acanthamoeba castellanii str. Neff	14921521
ACA1_053980	mRNA	ACA1_053980	NW_004457584.1	363971	367167	R	ACA1_053980	complement(join(<363971..364259,364338..364471,364548..364839,365148..365521,365587..365747,365812..365920,366003..366139,366213..366389,366466..366584,366622..366833,366898..366971,367113..>367167))	Acanthamoeba castellanii str. Neff	14921522
ACA1_053990	mRNA	ACA1_053990	NW_004457584.1	367684	369186	R	ACA1_053990	complement(join(<367684..368037,368137..>369186))	Acanthamoeba castellanii str. Neff	14921523
ACA1_054000	mRNA	ACA1_054000	NW_004457584.1	369574	371215	D	ACA1_054000	join(<369574..369647,369784..369974,370043..370081,370161..370337,370427..370584,370689..370847,370922..371012,371109..>371215)	Acanthamoeba castellanii str. Neff	14921524
ACA1_054010	mRNA	ACA1_054010	NW_004457584.1	371366	372957	D	ACA1_054010	join(<371366..371456,371536..371846,371981..372181,372285..372426,372509..372660,372751..>372957)	Acanthamoeba castellanii str. Neff	14921525
ACA1_054020	mRNA	ACA1_054020	NW_004457584.1	373033	375677	R	ACA1_054020	complement(join(<373033..373212,373360..373447,373554..373786,374144..374259,374380..374591,374746..374853,374929..>375677))	Acanthamoeba castellanii str. Neff	14921526
ACA1_054030	mRNA	ACA1_054030	NW_004457584.1	375757	377265	R	ACA1_054030	complement(join(<375757..376613,376737..376842,376926..377024,377155..>377265))	Acanthamoeba castellanii str. Neff	14921527
ACA1_054040	mRNA	ACA1_054040	NW_004457584.1	377596	381550	R	ACA1_054040	complement(join(<377596..377606,377678..377925,378033..378204,378299..378451,378542..378672,378769..378872,378966..379060,379161..379233,379362..379510,379669..379787,379946..380163,380257..380328,380474..380604,380800..>381550))	Acanthamoeba castellanii str. Neff	14921528
ACA1_054060	mRNA	ACA1_054060	NW_004457584.1	388046	391439	R	ACA1_054060	complement(join(<388046..388320,388385..388458,388492..388642,388748..388893,389018..389359,389815..389861,390071..390173,390271..390372,390451..390532,390599..390733,390841..390919,391031..391226,391351..>391439))	Acanthamoeba castellanii str. Neff	14921530
ACA1_054070	mRNA	ACA1_054070	NW_004457584.1	391543	392578	R	ACA1_054070	complement(join(<391543..391704,391826..392106,392308..392388,392488..>392578))	Acanthamoeba castellanii str. Neff	14921531
ACA1_054080	mRNA	ACA1_054080	NW_004457584.1	394458	397205	R	ACA1_054080	complement(join(<394458..394601,394685..394816,394829..394987,395065..395126,395202..395339,395423..395677,395769..395996,396093..396155,396225..396404,396473..396602,396847..396962,397163..>397205))	Acanthamoeba castellanii str. Neff	14921532
ACA1_054090	mRNA	ACA1_054090	NW_004457584.1	398188	399828	R	ACA1_054090	complement(join(<398188..398387,398479..398586,398759..398813,398868..398950,399052..399129,399182..399329,399410..399508,399598..>399828))	Acanthamoeba castellanii str. Neff	14921533
ACA1_054100	mRNA	ACA1_054100	NW_004457584.1	401458	405275	D	ACA1_054100	join(<401458..401527,401636..401841,401969..402089,402260..402312,402445..402841,402941..402984,403070..403192,403270..403430,403544..403676,404020..404200,404307..404394,404520..404694,404822..404956,405105..>405275)	Acanthamoeba castellanii str. Neff	14921534
ACA1_054110	mRNA	ACA1_054110	NW_004457584.1	405534	406834	D	ACA1_054110	join(<405534..405591,405647..405767,405847..405892,405990..406092,406211..406393,406545..>406834)	Acanthamoeba castellanii str. Neff	14921535
ACA1_054120	mRNA	ACA1_054120	NW_004457584.1	406966	410925	R	ACA1_054120	complement(join(<406966..407275,407420..407520,407585..408050,408149..408322,408422..408575,408689..408873,408952..409049,409147..409213,409291..409477,409558..409809,409924..410030,410135..410201,410368..410459,410750..>410925))	Acanthamoeba castellanii str. Neff	14921536
ACA1_054130	mRNA	ACA1_054130	NW_004457584.1	411171	412506	R	ACA1_054130	complement(join(<411171..411385,411677..411800,411891..412043,412189..412276,412343..>412506))	Acanthamoeba castellanii str. Neff	14921537
ACA1_054140	mRNA	ACA1_054140	NW_004457584.1	413482	414021	D	ACA1_054140	join(<413482..413607,413659..>414021)	Acanthamoeba castellanii str. Neff	14921538
ACA1_054150	mRNA	ACA1_054150	NW_004457584.1	414102	414832	R	ACA1_054150	complement(join(<414102..414381,414459..>414832))	Acanthamoeba castellanii str. Neff	14921539
ACA1_054160	mRNA	ACA1_054160	NW_004457584.1	414972	417104	R	ACA1_054160	complement(<414972..>417104)	Acanthamoeba castellanii str. Neff	14921540
ACA1_054170	mRNA	ACA1_054170	NW_004457584.1	418292	419148	R	ACA1_054170	complement(join(<418292..418387,418518..418603,418730..418794,418865..418953,419047..>419148))	Acanthamoeba castellanii str. Neff	14921541
ACA1_054180	mRNA	ACA1_054180	NW_004457584.1	419267	420247	D	ACA1_054180	join(<419267..419404,419582..419797,419955..420012,420096..>420247)	Acanthamoeba castellanii str. Neff	14921542
ACA1_054190	mRNA	ACA1_054190	NW_004457584.1	420540	421618	D	ACA1_054190	join(<420540..420658,420865..420938,421047..421174,421302..421409,421505..>421618)	Acanthamoeba castellanii str. Neff	14921543
ACA1_054200	mRNA	ACA1_054200	NW_004457584.1	422180	424188	D	ACA1_054200	join(<422180..422612,422674..422795,422879..423103,423328..423712,423920..>424188)	Acanthamoeba castellanii str. Neff	14921544
ACA1_054220	mRNA	ACA1_054220	NW_004457584.1	431751	434313	R	ACA1_054220	complement(join(<431751..432200,432220..432869,432977..433256,433328..433499,433575..433735,433821..434028,434093..434183,434259..>434313))	Acanthamoeba castellanii str. Neff	14921546
ACA1_054230	mRNA	ACA1_054230	NW_004457584.1	437416	439551	D	ACA1_054230	join(<437416..437519,437581..437652,437784..437846,437926..438013,438107..438178,438267..438373,438503..438703,438806..438886,438986..439091,439187..439262,439367..>439551)	Acanthamoeba castellanii str. Neff	14921547
ACA1_054240	mRNA	ACA1_054240	NW_004457584.1	439832	441042	D	ACA1_054240	join(<439832..440059,440145..440210,440288..440397,440487..440548,440638..440754,440843..>441042)	Acanthamoeba castellanii str. Neff	14921548
ACA1_054250	mRNA	ACA1_054250	NW_004457584.1	441424	444549	D	ACA1_054250	join(<441424..441594,441857..441986,442129..442242,442361..442401,442446..442527,442682..442828,442970..443071,443140..443252,443335..443392,443473..443562,443693..443754,443855..443992,444081..444248,444364..>444549)	Acanthamoeba castellanii str. Neff	14921549
ACA1_054260	mRNA	ACA1_054260	NW_004457584.1	445661	446049	R	ACA1_054260	complement(join(<445661..445841,446003..>446049))	Acanthamoeba castellanii str. Neff	14921550
ACA1_054270	mRNA	ACA1_054270	NW_004457584.1	446387	450530	R	ACA1_054270	complement(join(<446387..446512,446609..446680,446790..446918,447010..447081,447146..447198,447262..447356,447494..447639,447723..447805,447872..447933,448042..448151,448230..448291,448382..448709,448787..448857,448955..449017,449095..449265,449362..449450,449532..449670,449751..449796,449913..450048,450406..>450530))	Acanthamoeba castellanii str. Neff	14921551
ACA1_054280	mRNA	ACA1_054280	NW_004457584.1	450871	454524	R	ACA1_054280	complement(join(<450871..451685,451765..451872,451960..452097,452180..452266,452362..452439,452527..452601,452663..452743,452848..452919,452987..453058,453192..453269,453336..453416,453500..453604,453708..453782,453962..454062,454164..454305,454440..>454524))	Acanthamoeba castellanii str. Neff	14921552
ACA1_054290	mRNA	ACA1_054290	NW_004457584.1	454826	455116	D	ACA1_054290	join(<454826..454994,455079..>455116)	Acanthamoeba castellanii str. Neff	14921553
ACA1_054300	mRNA	ACA1_054300	NW_004457584.1	455627	457026	D	ACA1_054300	join(<455627..455745,455934..456165,456262..456404,456500..456711,456794..>457026)	Acanthamoeba castellanii str. Neff	14921554
ACA1_054310	mRNA	ACA1_054310	NW_004457584.1	457078	461365	R	ACA1_054310	complement(join(<457078..457218,457289..457344,457443..457512,457675..457780,457866..457960,458030..458088,458168..458400,458463..458628,458748..458829,458960..459164,459247..459389,459462..459760,459868..459977,460076..460169,460253..460520,460625..461172,461257..>461365))	Acanthamoeba castellanii str. Neff	14921555
ACA1_054320	mRNA	ACA1_054320	NW_004457584.1	461777	468893	R	ACA1_054320	complement(join(<461777..464773,464871..>468893))	Acanthamoeba castellanii str. Neff	14921556
ACA1_054330	mRNA	ACA1_054330	NW_004457584.1	469301	469890	R	ACA1_054330	complement(join(<469301..469358,469504..469621,469675..469736,469838..>469890))	Acanthamoeba castellanii str. Neff	14921557
ACA1_054340	mRNA	ACA1_054340	NW_004457584.1	470421	471659	D	ACA1_054340	<470421..>471659	Acanthamoeba castellanii str. Neff	14921558
ACA1_054350	mRNA	ACA1_054350	NW_004457584.1	472041	472367	R	ACA1_054350	complement(join(<472041..472168,472238..>472367))	Acanthamoeba castellanii str. Neff	14921559
ACA1_054360	mRNA	ACA1_054360	NW_004457584.1	472561	474508	D	ACA1_054360	join(<472561..473019,473172..473282,473383..473705,473832..473898,473997..474080,474179..>474508)	Acanthamoeba castellanii str. Neff	14921560
ACA1_054370	mRNA	ACA1_054370	NW_004457584.1	474585	475644	R	ACA1_054370	complement(join(<474585..474673,474778..474981,475068..475211,475300..475423,475510..>475644))	Acanthamoeba castellanii str. Neff	14921561
ACA1_054380	mRNA	ACA1_054380	NW_004457584.1	475979	478290	R	ACA1_054380	complement(join(<475979..476314,476392..476529,476706..476879,476970..477109,477246..477583,477678..477869,477962..>478290))	Acanthamoeba castellanii str. Neff	14921562
ACA1_054390	mRNA	ACA1_054390	NW_004457584.1	478613	479696	D	ACA1_054390	join(<478613..478685,478757..478863,478936..479014,479095..479110,479129..479247,479309..479384,479468..>479696)	Acanthamoeba castellanii str. Neff	14921563
ACA1_054400	mRNA	ACA1_054400	NW_004457584.1	480076	481221	R	ACA1_054400	complement(<480076..>481221)	Acanthamoeba castellanii str. Neff	14921564
ACA1_054410	mRNA	ACA1_054410	NW_004457584.1	482333	488629	R	ACA1_054410	complement(join(<482333..482555,482992..483069,483342..483425,483526..483649,483781..483892,484009..484120,484218..484395,484492..484552,484648..484718,484803..484923,485052..485193,485512..485781,485895..486004,486118..486260,486343..486444,486560..486656,486718..486836,486948..487799,487940..488072,488100..488117,488189..488330,488523..>488629))	Acanthamoeba castellanii str. Neff	14921565
ACA1_054420	mRNA	ACA1_054420	NW_004457584.1	488871	490863	D	ACA1_054420	join(<488871..488905,489020..489089,489185..489284,489376..489612,489688..489822,489959..490058,490212..490308,490789..>490863)	Acanthamoeba castellanii str. Neff	14921566
ACA1_054430	mRNA	ACA1_054430	NW_004457584.1	491153	493149	R	ACA1_054430	complement(join(<491153..491412,491498..491996,492126..492230,492243..492338,492403..492561,492645..492841,492954..>493149))	Acanthamoeba castellanii str. Neff	14921567
ACA1_054440	mRNA	ACA1_054440	NW_004457584.1	493906	496752	R	ACA1_054440	complement(join(<493906..494231,494319..494403,494475..494614,494714..494884,495032..495123,495208..495265,495366..495474,495552..495717,495923..496000,496163..496275,496403..496470,496569..496634,496683..>496752))	Acanthamoeba castellanii str. Neff	14921568
ACA1_054450	mRNA	ACA1_054450	NW_004457584.1	496878	498343	D	ACA1_054450	join(<496878..496958,497052..497206,497292..497472,497781..497882,497979..498058,498141..498228,498299..>498343)	Acanthamoeba castellanii str. Neff	14921569
ACA1_054460	mRNA	ACA1_054460	NW_004457584.1	498883	501129	R	ACA1_054460	complement(join(<498883..499007,499089..499206,499228..499494,499574..499732,499825..500037,500138..500282,500389..500465,500689..>501129))	Acanthamoeba castellanii str. Neff	14921570
ACA1_054470	mRNA	ACA1_054470	NW_004457584.1	502777	508037	R	ACA1_054470	complement(join(<502777..502916,503014..503225,503304..503394,503520..503592,503680..503795,503880..504222,504333..504456,504611..504735,504839..504926,505004..505137,505254..505302,505403..505448,505509..505549,505650..505711,505822..505933,506029..506146,506217..506303,506421..506504,506569..506922,506998..507483,507577..507623,507714..507931,508017..>508037))	Acanthamoeba castellanii str. Neff	14921571
ACA1_054480	mRNA	ACA1_054480	NW_004457584.1	508573	510219	D	ACA1_054480	join(<508573..508737,508809..508980,509161..509184,509255..509366,509446..509533,509617..509797,509870..509980,510077..>510219)	Acanthamoeba castellanii str. Neff	14921572
ACA1_054490	mRNA	ACA1_054490	NW_004457584.1	510279	511413	R	ACA1_054490	complement(join(<510279..510577,510671..510757,510867..510951,511037..511139,511271..>511413))	Acanthamoeba castellanii str. Neff	14921573
ACA1_054500	mRNA	ACA1_054500	NW_004457584.1	511532	515308	R	ACA1_054500	complement(join(<511532..511723,511820..512009,512129..512319,512457..512582,512679..512810,512912..513039,513129..513222,513314..513494,513599..513762,513867..513963,514076..514335,514351..514381,514509..514578,514688..514798,514878..514938,515126..>515308))	Acanthamoeba castellanii str. Neff	14921574
ACA1_054510	mRNA	ACA1_054510	NW_004457584.1	515526	519013	R	ACA1_054510	complement(join(<515526..515756,515875..516024,516139..516267,516356..516430,516794..517065,517161..517732,517820..517944,518064..518166,518263..518349,518433..518505,518632..518803,518909..>519013))	Acanthamoeba castellanii str. Neff	14921575
ACA1_054520	mRNA	ACA1_054520	NW_004457584.1	519379	524376	D	ACA1_054520	join(<519379..519454,519541..519765,519850..519959,520027..520167,520370..520430,520513..520626,520702..520901,520983..521066,521148..521251,521325..521508,521649..521933,522020..522191,522257..522420,522544..522657,522745..522831,522897..523106,523224..523310,523414..523632,523742..523900,523985..524167,524263..>524376)	Acanthamoeba castellanii str. Neff	14921576
ACA1_054530	mRNA	ACA1_054530	NW_004457584.1	524999	527915	D	ACA1_054530	join(<524999..525116,525230..525396,525531..525689,525770..525845,525995..526101,526401..526477,526551..526650,526773..526953,527048..527134,527197..527426,527508..527615,527709..>527915)	Acanthamoeba castellanii str. Neff	14921577
ACA1_054540	mRNA	ACA1_054540	NW_004457584.1	528022	529269	R	ACA1_054540	complement(join(<528022..528390,528472..>529269))	Acanthamoeba castellanii str. Neff	14921578
ACA1_054550	mRNA	ACA1_054550	NW_004457584.1	529405	530221	R	ACA1_054550	complement(join(<529405..529482,529576..529761,529872..530006,530093..>530221))	Acanthamoeba castellanii str. Neff	14921579
ACA1_054560	mRNA	ACA1_054560	NW_004457584.1	530269	531494	R	ACA1_054560	complement(join(<530269..530484,530835..530968,531072..531172,531310..>531494))	Acanthamoeba castellanii str. Neff	14921580
ACA1_054570	mRNA	ACA1_054570	NW_004457584.1	531916	534389	R	ACA1_054570	complement(join(<531916..532064,532187..532345,532464..532603,532679..532920,533063..533244,533627..533711,533787..533877,533946..534089,534211..>534389))	Acanthamoeba castellanii str. Neff	14921581
ACA1_054580	mRNA	ACA1_054580	NW_004457584.1	534617	535623	R	ACA1_054580	complement(join(<534617..535288,535310..535490,535568..>535623))	Acanthamoeba castellanii str. Neff	14921582
ACA1_054590	mRNA	ACA1_054590	NW_004457584.1	536184	537323	R	ACA1_054590	complement(<536184..>537323)	Acanthamoeba castellanii str. Neff	14921583
ACA1_054600	mRNA	ACA1_054600	NW_004457584.1	538305	539599	R	ACA1_054600	complement(join(<538305..539367,539473..539484,539544..>539599))	Acanthamoeba castellanii str. Neff	14921584
ACA1_054610	mRNA	ACA1_054610	NW_004457584.1	540249	543102	D	ACA1_054610	join(<540249..540485,540572..540639,540754..540865,540932..541043,541138..541295,541416..541580,541656..541785,541886..542054,542139..542230,542307..542455,542577..542676,542802..542895,542994..>543102)	Acanthamoeba castellanii str. Neff	14921585
ACA1_054620	mRNA	ACA1_054620	NW_004457584.1	543139	545504	D	ACA1_054620	join(<543139..543302,543397..544353,544469..544627,544709..>545504)	Acanthamoeba castellanii str. Neff	14921586
ACA1_054630	mRNA	ACA1_054630	NW_004457584.1	545693	546765	D	ACA1_054630	join(<545693..545847,545945..546059,546151..546233,546375..546535,546641..>546765)	Acanthamoeba castellanii str. Neff	14921587
ACA1_054640	mRNA	ACA1_054640	NW_004457584.1	546866	548863	R	ACA1_054640	complement(join(<546866..547161,547269..547443,547603..547884,548003..548107,548120..548374,548453..>548863))	Acanthamoeba castellanii str. Neff	14921588
ACA1_054650	mRNA	ACA1_054650	NW_004457584.1	549316	550219	D	ACA1_054650	join(<549316..549472,549616..549938,550043..>550219)	Acanthamoeba castellanii str. Neff	14921589
ACA1_054660	mRNA	ACA1_054660	NW_004457584.1	550270	551075	R	ACA1_054660	complement(join(<550270..550930,550996..>551075))	Acanthamoeba castellanii str. Neff	14921590
ACA1_054670	mRNA	ACA1_054670	NW_004457584.1	551541	552235	R	ACA1_054670	complement(join(<551541..552113,552191..>552235))	Acanthamoeba castellanii str. Neff	14921591
ACA1_054680	mRNA	ACA1_054680	NW_004457584.1	552740	553085	R	ACA1_054680	complement(join(<552740..552748,552759..>553085))	Acanthamoeba castellanii str. Neff	14921592
ACA1_054690	mRNA	ACA1_054690	NW_004457584.1	553547	557756	R	ACA1_054690	complement(join(<553547..553606,553698..553795,553926..554078,554243..554336,554431..554579,554677..554818,554924..555051,555140..555205,555295..555403,555504..555620,555721..555863,555946..556067,556150..556271,556355..556456,556563..556637,556754..556843,556927..556989,557025..557159,557253..557354,557471..557548,557658..>557756))	Acanthamoeba castellanii str. Neff	14921593
ACA1_054700	mRNA	ACA1_054700	NW_004457584.1	558332	558872	R	ACA1_054700	complement(join(<558332..558453,558568..558665,558808..>558872))	Acanthamoeba castellanii str. Neff	14921594
ACA1_054710	mRNA	ACA1_054710	NW_004457584.1	558907	559529	R	ACA1_054710	complement(join(<558907..559063,559162..559211,559296..559354,559409..>559529))	Acanthamoeba castellanii str. Neff	14921595
ACA1_054720	mRNA	ACA1_054720	NW_004457584.1	559713	560528	R	ACA1_054720	complement(<559713..>560528)	Acanthamoeba castellanii str. Neff	14921596
ACA1_054730	mRNA	ACA1_054730	NW_004457584.1	560661	562852	R	ACA1_054730	complement(join(<560661..560910,560982..561139,561255..561377,561570..561711,561808..561958,562063..562112,562218..562405,562523..>562852))	Acanthamoeba castellanii str. Neff	14921597
ACA1_054740	mRNA	ACA1_054740	NW_004457584.1	563018	563940	D	ACA1_054740	join(<563018..563179,563288..563410,563485..563568,563684..563770,563857..>563940)	Acanthamoeba castellanii str. Neff	14921598
ACA1_054750	mRNA	ACA1_054750	NW_004457584.1	564008	565444	R	ACA1_054750	complement(join(<564008..564163,564250..564354,564440..564521,564592..564740,564870..565013,565088..565152,565252..>565444))	Acanthamoeba castellanii str. Neff	14921599
ACA1_054760	mRNA	ACA1_054760	NW_004457584.1	565866	567384	D	ACA1_054760	join(<565866..565896,565976..566071,566180..566232,566456..566528,566638..566681,566751..566825,566911..567019,567122..567240,567325..>567384)	Acanthamoeba castellanii str. Neff	14921600
ACA1_054770	mRNA	ACA1_054770	NW_004457584.1	567620	569943	D	ACA1_054770	join(<567620..567701,567731..568089,568166..568237,568287..568406,568568..568663,568736..568807,568874..568973,569038..569212,569306..569433,569511..569572,569656..569823,569890..>569943)	Acanthamoeba castellanii str. Neff	14921601
ACA1_054780	mRNA	ACA1_054780	NW_004457584.1	570301	571425	R	ACA1_054780	complement(join(<570301..570438,570515..570655,570799..570874,570974..571083,571167..571185,571283..>571425))	Acanthamoeba castellanii str. Neff	14921602
ACA1_054790	mRNA	ACA1_054790	NW_004457584.1	571750	574402	R	ACA1_054790	complement(join(<571750..571848,571953..572032,572128..572236,572333..572446,572589..572725,572810..573034,573104..573277,573360..573428,573505..573613,573723..573817,573895..574009,574148..574281,574378..>574402))	Acanthamoeba castellanii str. Neff	14921603
ACA1_054800	mRNA	ACA1_054800	NW_004457584.1	574771	576048	R	ACA1_054800	complement(join(<574771..575169,575311..>576048))	Acanthamoeba castellanii str. Neff	14921604
ACA1_054810	mRNA	ACA1_054810	NW_004457584.1	577022	578274	D	ACA1_054810	join(<577022..577741,578089..>578274)	Acanthamoeba castellanii str. Neff	14921605
ACA1_054820	mRNA	ACA1_054820	NW_004457584.1	578326	585643	R	ACA1_054820	complement(join(<578326..578519,578624..578691,578768..578865,578943..579022,579109..579274,579352..579859,579955..580061,580184..580257,580367..580452,580577..580655,580774..580901,581004..581068,581182..581269,581364..581453,581543..581622,581712..581806,581994..582117,582208..582336,582440..582628,582738..582842,582921..583016,583110..583195,583257..583336,583440..583483,583565..583663,583775..583935,584040..584122,584206..584335,584418..584445,584530..584622,584719..584842,584938..585013,585109..585155,585268..585325,585432..585475,585561..>585643))	Acanthamoeba castellanii str. Neff	14921606
ACA1_054830	mRNA	ACA1_054830	NW_004457584.1	585862	588690	D	ACA1_054830	join(<585862..585969,586052..586720,586800..587271,587354..587523,587617..588041,588180..>588690)	Acanthamoeba castellanii str. Neff	14921607
ACA1_054840	mRNA	ACA1_054840	NW_004457584.1	588723	591345	R	ACA1_054840	complement(join(<588723..588856,588951..589085,589185..589274,589345..589426,589507..589683,589809..589984,590064..590145,590236..590291,590367..590487,590597..590682,590755..590861,590949..591039,591125..591203,591286..>591345))	Acanthamoeba castellanii str. Neff	14921608
ACA1_054850	mRNA	ACA1_054850	NW_004457584.1	591432	592277	R	ACA1_054850	complement(join(<591432..591501,591623..591747,591852..591985,592109..>592277))	Acanthamoeba castellanii str. Neff	14921609
ACA1_054860	mRNA	ACA1_054860	NW_004457584.1	592442	593854	D	ACA1_054860	join(<592442..593116,593236..593314,593391..>593854)	Acanthamoeba castellanii str. Neff	14921610
ACA1_054870	mRNA	ACA1_054870	NW_004457584.1	593881	595103	R	ACA1_054870	complement(join(<593881..593945,594050..594234,594318..594546,594672..594830,594941..>595103))	Acanthamoeba castellanii str. Neff	14921611
ACA1_054880	mRNA	ACA1_054880	NW_004457584.1	596318	597797	D	ACA1_054880	join(<596318..596802,596888..596981,597056..597135,597264..597378,597483..>597797)	Acanthamoeba castellanii str. Neff	14921612
ACA1_054890	mRNA	ACA1_054890	NW_004457584.1	597840	603282	R	ACA1_054890	complement(join(<597840..598046,598189..598431,598568..598657,598733..598799,598886..599006,599118..599271,599380..599530,599596..599834,599961..600073,600162..601700,601773..602853,602947..603094,603176..>603282))	Acanthamoeba castellanii str. Neff	14921613
ACA1_054900	mRNA	ACA1_054900	NW_004457584.1	603532	604114	D	ACA1_054900	join(<603532..603607,603685..603743,603818..>604114)	Acanthamoeba castellanii str. Neff	14921614
ACA1_054910	mRNA	ACA1_054910	NW_004457584.1	604144	604921	R	ACA1_054910	complement(join(<604144..604245,604337..604471,604544..604639,604727..>604921))	Acanthamoeba castellanii str. Neff	14921615
ACA1_054920	mRNA	ACA1_054920	NW_004457584.1	605035	605979	R	ACA1_054920	complement(<605035..>605979)	Acanthamoeba castellanii str. Neff	14921616
ACA1_054930	mRNA	ACA1_054930	NW_004457584.1	606210	607943	D	ACA1_054930	join(<606210..606275,606377..606457,606512..606588,606673..606933,606995..607125,607208..607301,607385..607466,607532..607614,607676..607745,607848..>607943)	Acanthamoeba castellanii str. Neff	14921617
ACA1_054940	mRNA	ACA1_054940	NW_004457584.1	608251	608803	D	ACA1_054940	join(<608251..608488,608604..608670,608743..>608803)	Acanthamoeba castellanii str. Neff	14921618
ACA1_054950	mRNA	ACA1_054950	NW_004457584.1	609541	613419	D	ACA1_054950	join(<609541..610659,610731..610883,611056..611145,611246..611393,611464..611934,612002..612439,612461..612821,612974..613245,613327..613387,613401..>613419)	Acanthamoeba castellanii str. Neff	14921619
ACA1_054960	mRNA	ACA1_054960	NW_004457584.1	613448	613675	R	ACA1_054960	complement(<613448..>613675)	Acanthamoeba castellanii str. Neff	14921620
ACA1_054970	mRNA	ACA1_054970	NW_004457584.1	614218	616572	R	ACA1_054970	complement(join(<614218..614295,614391..614561,614633..615135,615227..615351,615466..615590,615681..615862,615947..616119,616211..>616572))	Acanthamoeba castellanii str. Neff	14921621
ACA1_054980	mRNA	ACA1_054980	NW_004457584.1	617139	620017	D	ACA1_054980	join(<617139..617291,617389..617950,618016..618101,618164..618292,618360..618494,618578..618646,618737..619370,619452..619537,619616..619736,619824..>620017)	Acanthamoeba castellanii str. Neff	14921622
ACA1_054990	mRNA	ACA1_054990	NW_004457584.1	620377	622461	D	ACA1_054990	join(<620377..620419,620518..620603,620695..620770,620858..621037,621170..621267,621392..621461,621553..621609,621704..621946,622114..622215,622298..622348,622424..>622461)	Acanthamoeba castellanii str. Neff	14921623
ACA1_055000	mRNA	ACA1_055000	NW_004457584.1	622799	625214	D	ACA1_055000	join(<622799..623107,623228..623652,623723..623838,623934..624484,624574..624850,624943..>625214)	Acanthamoeba castellanii str. Neff	14921624
ACA1_055010	mRNA	ACA1_055010	NW_004457584.1	625972	629338	D	ACA1_055010	join(<625972..626034,626260..626362,626453..626526,626718..626898,627047..627328,627458..627602,627707..627802,627888..627987,628107..628638,628826..629004,629111..>629338)	Acanthamoeba castellanii str. Neff	14921625
ACA1_055020	mRNA	ACA1_055020	NW_004457584.1	629478	629933	D	ACA1_055020	<629478..>629933	Acanthamoeba castellanii str. Neff	14921626
ACA1_055030	mRNA	ACA1_055030	NW_004457584.1	630009	637151	R	ACA1_055030	complement(join(<630009..630701,630799..630911,631050..631134,631214..631296,631399..631547,631631..631685,631793..631891,632045..632165,632279..632419,632544..632611,632693..632737,632815..632884,633004..633073,633153..633322,633431..633541,633673..633770,633865..634003,634095..634171,634266..634355,634440..634552,634641..635059,635162..635279,635371..635445,635522..635815,636244..636439,636586..636618,636724..636814,636993..>637151))	Acanthamoeba castellanii str. Neff	14921627
ACA1_055040	mRNA	ACA1_055040	NW_004457584.1	638262	640010	R	ACA1_055040	complement(<638262..>640010)	Acanthamoeba castellanii str. Neff	14921628
ACA1_055050	mRNA	ACA1_055050	NW_004457584.1	640391	641960	D	ACA1_055050	join(<640391..640473,640553..640790,640890..640926,641001..641714,641812..>641960)	Acanthamoeba castellanii str. Neff	14921629
ACA1_055060	mRNA	ACA1_055060	NW_004457584.1	642378	647121	D	ACA1_055060	join(<642378..642581,642706..642895,642979..643069,643204..643273,643374..643513,643624..643918,644097..644206,644295..644371,644460..644857,644945..645017,645602..645628,646275..646387,646473..646629,646717..646869,646942..647069,647095..>647121)	Acanthamoeba castellanii str. Neff	14921630
ACA1_055270	mRNA	ACA1_055270	NW_004457584.1	668909	670133	D	ACA1_055270	join(<668909..669067,669158..669290,669347..669633,669725..669849,669947..>670133)	Acanthamoeba castellanii str. Neff	14921631
ACA1_055280	mRNA	ACA1_055280	NW_004457584.1	670461	671534	D	ACA1_055280	join(<670461..670514,670586..670768,670880..670969,671055..>671534)	Acanthamoeba castellanii str. Neff	14921632
ACA1_055290	mRNA	ACA1_055290	NW_004457584.1	671655	674251	R	ACA1_055290	complement(join(<671655..671825,671848..671918,672053..672455,672536..672657,672763..673002,673099..673214,673336..673416,673525..673643,673796..>674251))	Acanthamoeba castellanii str. Neff	14921633
ACA1_055300	mRNA	ACA1_055300	NW_004457584.1	675229	676190	R	ACA1_055300	complement(join(<675229..675431,675473..675723,675841..>676190))	Acanthamoeba castellanii str. Neff	14921634
ACA1_055310	mRNA	ACA1_055310	NW_004457584.1	676361	677667	D	ACA1_055310	join(<676361..676641,676704..676813,676900..677031,677108..677289,677407..>677667)	Acanthamoeba castellanii str. Neff	14921635
ACA1_055320	mRNA	ACA1_055320	NW_004457584.1	678005	678283	D	ACA1_055320	<678005..>678283	Acanthamoeba castellanii str. Neff	14921636
ACA1_055330	mRNA	ACA1_055330	NW_004457584.1	678637	682014	D	ACA1_055330	join(<678637..678666,678765..678881,679053..679218,679299..679657,679739..679852,679914..680418,680479..681163,681239..681468,681530..681662,681720..681768,681841..681915,681988..>682014)	Acanthamoeba castellanii str. Neff	14921637
ACA1_055340	mRNA	ACA1_055340	NW_004457584.1	682264	687767	D	ACA1_055340	join(<682264..682401,682475..682555,682630..683061,683154..683275,683385..683487,683552..683749,683826..684152,684231..684281,684357..684498,684565..685359,685440..685554,685640..685880,685976..686288,686356..686475,686540..686767,686855..686980,687053..687235,687292..>687767)	Acanthamoeba castellanii str. Neff	14921638
ACA1_055350	mRNA	ACA1_055350	NW_004457584.1	687941	688544	D	ACA1_055350	join(<687941..688097,688174..>688544)	Acanthamoeba castellanii str. Neff	14921639
ACA1_055360	mRNA	ACA1_055360	NW_004457584.1	688756	689033	D	ACA1_055360	join(<688756..688917,688950..>689033)	Acanthamoeba castellanii str. Neff	14921640
ACA1_055370	mRNA	ACA1_055370	NW_004457584.1	690763	691366	R	ACA1_055370	complement(join(<690763..691133,691210..>691366))	Acanthamoeba castellanii str. Neff	14921641
ACA1_055380	mRNA	ACA1_055380	NW_004457584.1	691536	692232	R	ACA1_055380	complement(join(<691536..691781,691897..692000,692065..692182,692212..>692232))	Acanthamoeba castellanii str. Neff	14921642
ACA1_055390	mRNA	ACA1_055390	NW_004457584.1	692931	695365	R	ACA1_055390	complement(join(<692931..693091,693206..693225,693302..693398,693472..693584,693666..694126,694209..694337,694412..694658,694732..694862,694936..695237,695308..>695365))	Acanthamoeba castellanii str. Neff	14921643
ACA1_055400	mRNA	ACA1_055400	NW_004457584.1	696109	697177	R	ACA1_055400	complement(join(<696109..696198,696271..696379,696471..696596,696658..696776,696848..696940,697037..>697177))	Acanthamoeba castellanii str. Neff	14921644
ACA1_055410	mRNA	ACA1_055410	NW_004457584.1	697620	700761	D	ACA1_055410	join(<697620..697772,697989..698542,698589..698739,698860..699015,699087..699317,699463..699600,699678..699765,699867..700372,700469..700576,700681..>700761)	Acanthamoeba castellanii str. Neff	14921645
ACA1_055420	mRNA	ACA1_055420	NW_004457584.1	700798	701434	R	ACA1_055420	complement(join(<700798..701205,701282..>701434))	Acanthamoeba castellanii str. Neff	14921646
ACA1_055430	mRNA	ACA1_055430	NW_004457584.1	701916	704504	D	ACA1_055430	join(<701916..702096,702239..702301,702390..702650,702725..702817,702898..703066,703219..703309,703398..703532,703614..703699,703787..703894,703969..704083,704204..704286,704387..>704504)	Acanthamoeba castellanii str. Neff	14921647
ACA1_055440	mRNA	ACA1_055440	NW_004457584.1	704675	707204	D	ACA1_055440	join(<704675..704806,704875..704951,705080..705251,705339..705425,705544..705787,705893..706146,706281..706412,706524..706838,707046..>707204)	Acanthamoeba castellanii str. Neff	14921648
ACA1_055450	mRNA	ACA1_055450	NW_004457584.1	707522	708855	D	ACA1_055450	join(<707522..707544,707613..707727,707836..707896,707966..708076,708158..708264,708349..>708855)	Acanthamoeba castellanii str. Neff	14921649
ACA1_055460	mRNA	ACA1_055460	NW_004457584.1	708960	709679	D	ACA1_055460	join(<708960..709029,709060..709121,709257..>709679)	Acanthamoeba castellanii str. Neff	14921650
ACA1_055470	mRNA	ACA1_055470	NW_004457584.1	709849	711478	D	ACA1_055470	join(<709849..710028,710096..710151,710243..710384,710447..710502,710570..710910,711000..711222,711316..>711478)	Acanthamoeba castellanii str. Neff	14921651
ACA1_055480	mRNA	ACA1_055480	NW_004457584.1	711542	715775	R	ACA1_055480	complement(join(<711542..712113,712242..712392,712474..712581,712693..712814,712895..713135,713198..713410,713506..713620,713722..713854,713972..714150,714237..714337,714711..714842,714923..714972,715061..715177,715232..>715775))	Acanthamoeba castellanii str. Neff	14921652
ACA1_055490	mRNA	ACA1_055490	NW_004457584.1	715886	717801	D	ACA1_055490	join(<715886..716041,716153..716332,716494..716632,716774..716947,717078..717266,717366..717535,717625..>717801)	Acanthamoeba castellanii str. Neff	14921653
ACA1_055500	mRNA	ACA1_055500	NW_004457584.1	717900	719457	R	ACA1_055500	complement(join(<717900..718232,718322..718437,718503..718621,718693..718792,718860..718986,719083..>719457))	Acanthamoeba castellanii str. Neff	14921654
ACA1_055510	mRNA	ACA1_055510	NW_004457584.1	719845	722568	R	ACA1_055510	complement(join(<719845..719858,719949..720022,720125..720203,720291..720433,720525..720625,720876..720987,721081..721161,721260..721350,721443..721561,721624..721767,721843..721898,722069..722123,722235..722343,722502..>722568))	Acanthamoeba castellanii str. Neff	14921655
ACA1_055520	mRNA	ACA1_055520	NW_004457584.1	722706	724697	R	ACA1_055520	complement(join(<722706..722920,723030..723107,723204..723256,723364..723459,723537..723574,723645..723736,723830..723983,724049..724071,724173..724266,724370..724483,724572..>724697))	Acanthamoeba castellanii str. Neff	14921656
ACA1_055530	mRNA	ACA1_055530	NW_004457584.1	724885	725235	D	ACA1_055530	<724885..>725235	Acanthamoeba castellanii str. Neff	14921657
ACA1_055540	mRNA	ACA1_055540	NW_004457584.1	725498	727042	R	ACA1_055540	complement(join(<725498..725600,725720..725806,725919..726423,726502..>727042))	Acanthamoeba castellanii str. Neff	14921658
ACA1_055550	mRNA	ACA1_055550	NW_004457584.1	727440	728335	R	ACA1_055550	complement(join(<727440..728260,728329..>728335))	Acanthamoeba castellanii str. Neff	14921659
ACA1_055560	mRNA	ACA1_055560	NW_004457584.1	728697	729139	R	ACA1_055560	complement(join(<728697..728707,728781..728891,728956..>729139))	Acanthamoeba castellanii str. Neff	14921660
ACA1_055570	mRNA	ACA1_055570	NW_004457584.1	729942	731490	R	ACA1_055570	complement(join(<729942..730177,730264..730848,730937..731044,731169..731187,731255..731339,731424..731437,731476..>731490))	Acanthamoeba castellanii str. Neff	14921661
ACA1_055580	mRNA	ACA1_055580	NW_004457584.1	734444	738062	D	ACA1_055580	join(<734444..734676,734781..735468,735581..735686,735892..735973,736062..736142,736243..736293,736386..736719,736813..736886,737017..737185,737337..737411,737524..737657,737739..737841,737931..>738062)	Acanthamoeba castellanii str. Neff	14921662
ACA1_055590	mRNA	ACA1_055590	NW_004457584.1	738158	739418	R	ACA1_055590	complement(join(<738158..738193,738250..738374,738455..738615,738704..738780,738866..738948,739078..739242,739340..>739418))	Acanthamoeba castellanii str. Neff	14921663
ACA1_055600	mRNA	ACA1_055600	NW_004457584.1	739572	742507	R	ACA1_055600	complement(join(<739572..739621,739725..739856,739927..740124,740192..740281,740353..740497,740724..740816,740913..741005,741094..741210,741302..741370,741449..>742507))	Acanthamoeba castellanii str. Neff	14921664
ACA1_055610	mRNA	ACA1_055610	NW_004457584.1	743059	743951	R	ACA1_055610	complement(join(<743059..743390,743486..>743951))	Acanthamoeba castellanii str. Neff	14921665
ACA1_055620	mRNA	ACA1_055620	NW_004457584.1	744144	751139	R	ACA1_055620	complement(join(<744144..744313,744414..744643,744740..744843,744932..745003,745085..745254,745353..745811,745887..745991,746096..746219,746328..746498,746610..746696,746809..746977,747077..747182,747284..747383,747457..747556,747658..747752,747829..747918,748014..748094,748206..748444,748620..748758,748897..749154,749261..749390,749485..749629,749705..749813,749926..750019,750114..750199,750300..>751139))	Acanthamoeba castellanii str. Neff	14921666
ACA1_055630	mRNA	ACA1_055630	NW_004457584.1	751744	754940	R	ACA1_055630	complement(join(<751744..752126,752193..752295,752359..752445,752513..752572,752694..752765,752843..753094,753487..753570,753672..754444,754516..754647,754859..>754940))	Acanthamoeba castellanii str. Neff	14921667
ACA1_055640	mRNA	ACA1_055640	NW_004457584.1	755569	764362	D	ACA1_055640	join(<755569..756375,756500..756639,756722..756853,756945..757025,757120..757243,757334..757441,757534..757656,757764..758077,758147..758331,758414..758745,758828..758920,758991..759140,759235..759323,759402..759550,759643..759818,759894..760067,760134..760248,760330..761813,761921..>764362)	Acanthamoeba castellanii str. Neff	14921668
ACA1_055650	mRNA	ACA1_055650	NW_004457584.1	764561	766564	D	ACA1_055650	join(<764561..764653,764724..764974,765076..765196,765319..765404,765552..765650,765725..765894,766000..766124,766205..766325,766383..>766564)	Acanthamoeba castellanii str. Neff	14921669
ACA1_055660	mRNA	ACA1_055660	NW_004457584.1	766698	767928	D	ACA1_055660	join(<766698..766745,766854..766965,767042..767203,767262..767329,767462..767567,767642..767715,767776..>767928)	Acanthamoeba castellanii str. Neff	14921670
ACA1_055670	mRNA	ACA1_055670	NW_004457584.1	768113	768930	D	ACA1_055670	join(<768113..768269,768338..768660,768751..>768930)	Acanthamoeba castellanii str. Neff	14921671
ACA1_055680	mRNA	ACA1_055680	NW_004457584.1	768977	769479	R	ACA1_055680	complement(join(<768977..768987,769008..>769479))	Acanthamoeba castellanii str. Neff	14921672
ACA1_055790	mRNA	ACA1_055790	NW_004457584.1	770022	771247	D	ACA1_055790	join(<770022..770250,770482..770578,770589..770624,770668..770803,770899..771015,771122..>771247)	Acanthamoeba castellanii str. Neff	14921673
ACA1_055800	mRNA	ACA1_055800	NW_004457584.1	771659	773065	D	ACA1_055800	join(<771659..771833,771918..771988,772009..772091,772261..772400,772469..772791,772886..>773065)	Acanthamoeba castellanii str. Neff	14921674
ACA1_055810	mRNA	ACA1_055810	NW_004457584.1	773199	773617	R	ACA1_055810	complement(join(<773199..773396,773456..>773617))	Acanthamoeba castellanii str. Neff	14921675
ACA1_055820	mRNA	ACA1_055820	NW_004457584.1	773909	776001	D	ACA1_055820	join(<773909..774307,774410..774505,774642..774725,774834..774968,775093..775217,775306..775435,775522..>776001)	Acanthamoeba castellanii str. Neff	14921676
ACA1_055830	mRNA	ACA1_055830	NW_004457584.1	776059	778833	R	ACA1_055830	complement(join(<776059..776818,776926..777073,777150..777252,777329..777371,777445..777614,777701..777808,777940..778209,778274..778374,778473..778612,778742..>778833))	Acanthamoeba castellanii str. Neff	14921677
ACA1_055840	mRNA	ACA1_055840	NW_004457584.1	779271	780726	D	ACA1_055840	join(<779271..779697,779826..779875,780211..780289,780343..780453,780573..780596,780689..>780726)	Acanthamoeba castellanii str. Neff	14921678
ACA1_055950	mRNA	ACA1_055950	NW_004457584.1	785308	791689	D	ACA1_055950	join(<785308..785386,785473..785572,785665..785725,785914..786051,786130..786435,786538..786851,786942..787291,787383..787624,787752..787856,787959..788094,788169..788564,788661..788923,788996..789077,789149..789183,789304..789400,789519..789570,789655..789867,789897..790661,790690..790994,791092..791351,791390..>791689)	Acanthamoeba castellanii str. Neff	14921679
ACA1_055960	mRNA	ACA1_055960	NW_004457584.1	792291	792630	D	ACA1_055960	join(<792291..792462,792503..>792630)	Acanthamoeba castellanii str. Neff	14921680
ACA1_055970	mRNA	ACA1_055970	NW_004457584.1	792676	794213	R	ACA1_055970	complement(join(<792676..792713,792794..792923,792988..793534,793638..793752,793832..793933,794000..>794213))	Acanthamoeba castellanii str. Neff	14921681
ACA1_055980	mRNA	ACA1_055980	NW_004457584.1	795074	795655	D	ACA1_055980	join(<795074..795118,795179..795298,795389..>795655)	Acanthamoeba castellanii str. Neff	14921682
ACA1_055990	mRNA	ACA1_055990	NW_004457584.1	796226	797224	D	ACA1_055990	join(<796226..796590,796663..>797224)	Acanthamoeba castellanii str. Neff	14921683
ACA1_098380	mRNA	ACA1_098380	NW_004457582.1	217	816	R	ACA1_098380	complement(join(<217..686,747..>816))	Acanthamoeba castellanii str. Neff	14921391
ACA1_098390	mRNA	ACA1_098390	NW_004457582.1	1189	2525	R	ACA1_098390	complement(join(<1189..1589,1687..1790,1912..2011,2085..2263,2334..2383,2490..>2525))	Acanthamoeba castellanii str. Neff	14921364
ACA1_098400	mRNA	ACA1_098400	NW_004457582.1	2865	3391	D	ACA1_098400	join(<2865..3005,3125..3198,3271..>3391)	Acanthamoeba castellanii str. Neff	14921365
ACA1_098410	mRNA	ACA1_098410	NW_004457582.1	3451	5062	D	ACA1_098410	join(<3451..3628,3738..3890,3966..4160,4237..4404,4456..4529,4543..4552,4671..4754,4847..4912,5001..>5062)	Acanthamoeba castellanii str. Neff	14921355
ACA1_098420	mRNA	ACA1_098420	NW_004457582.1	5634	7999	D	ACA1_098420	join(<5634..5886,6318..6425,6513..6686,6799..6994,7109..7542,7677..>7999)	Acanthamoeba castellanii str. Neff	14921353
ACA1_098430	mRNA	ACA1_098430	NW_004457582.1	8353	11655	D	ACA1_098430	join(<8353..8921,9107..9224,9347..9457,9512..9577,9742..9894,9961..10044,10136..10321,10434..10641,10761..11089,11179..11354,11436..>11655)	Acanthamoeba castellanii str. Neff	14921354
ACA1_098450	mRNA	ACA1_098450	NW_004457582.1	15602	16566	R	ACA1_098450	complement(join(<15602..15915,16010..16448,16537..>16566))	Acanthamoeba castellanii str. Neff	14921357
ACA1_098460	mRNA	ACA1_098460	NW_004457582.1	17125	19404	D	ACA1_098460	join(<17125..17679,17759..17857,17943..18093,18177..18310,18474..18567,18641..18901,18971..19044,19148..19203,19323..>19404)	Acanthamoeba castellanii str. Neff	14921358
ACA1_098570	mRNA	ACA1_098570	NW_004457582.1	20247	20576	D	ACA1_098570	<20247..>20576	Acanthamoeba castellanii str. Neff	14921359
ACA1_098680	mRNA	ACA1_098680	NW_004457582.1	21125	22314	R	ACA1_098680	complement(join(<21125..21186,21318..21502,21601..21829,21911..22054,22146..>22314))	Acanthamoeba castellanii str. Neff	14921360
ACA1_098690	mRNA	ACA1_098690	NW_004457582.1	22665	27909	R	ACA1_098690	complement(join(<22665..22779,22876..23679,23781..23836,23940..24029,24133..24384,24509..24662,24769..24931,25026..25110,25199..25977,26052..26156,26304..>27909))	Acanthamoeba castellanii str. Neff	14921361
ACA1_098800	mRNA	ACA1_098800	NW_004457582.1	29807	32416	D	ACA1_098800	join(<29807..30057,30180..30309,30394..30457,30545..30688,30792..30884,30992..31101,31225..31286,31377..31463,31563..31722,31836..31861,31894..>32416)	Acanthamoeba castellanii str. Neff	14921362
ACA1_098810	mRNA	ACA1_098810	NW_004457582.1	32851	33555	D	ACA1_098810	join(<32851..33077,33162..33322,33476..>33555)	Acanthamoeba castellanii str. Neff	14921363
ACA1_098820	mRNA	ACA1_098820	NW_004457582.1	34606	35598	D	ACA1_098820	<34606..>35598	Acanthamoeba castellanii str. Neff	14921366
ACA1_098830	mRNA	ACA1_098830	NW_004457582.1	36009	37718	D	ACA1_098830	join(<36009..37147,37161..37168,37192..37356,37452..37512,37625..>37718)	Acanthamoeba castellanii str. Neff	14921367
ACA1_098840	mRNA	ACA1_098840	NW_004457582.1	38150	40934	R	ACA1_098840	complement(join(<38150..38345,38523..38791,38867..39702,39805..40471,40581..>40934))	Acanthamoeba castellanii str. Neff	14921368
ACA1_098860	mRNA	ACA1_098860	NW_004457582.1	44424	49481	D	ACA1_098860	join(<44424..44429,44440..44583,44709..45185,45271..45414,45531..45713,45789..45907,45975..46125,46199..46465,46537..46718,46826..47239,47306..47367,47459..47897,47976..48159,48303..48332,48428..48670,48795..48873,48974..49200,49296..>49481)	Acanthamoeba castellanii str. Neff	14921370
ACA1_098870	mRNA	ACA1_098870	NW_004457582.1	49569	51772	D	ACA1_098870	join(<49569..49753,49894..49965,50060..50140,50349..50597,50707..50792,50891..51006,51254..51389,51579..>51772)	Acanthamoeba castellanii str. Neff	14921371
ACA1_098880	mRNA	ACA1_098880	NW_004457582.1	51863	55776	R	ACA1_098880	complement(join(<51863..51940,51991..52116,52250..52313,52438..52532,52729..52869,52978..53034,53127..53295,53419..53498,53568..53714,53821..53940,54029..54103,54181..54237,54355..54518,54617..54688,54781..54860,55027..55109,55199..55360,55461..55539,55661..>55776))	Acanthamoeba castellanii str. Neff	14921372
ACA1_098890	mRNA	ACA1_098890	NW_004457582.1	56752	57894	D	ACA1_098890	join(<56752..56775,56908..56982,57139..57221,57295..57428,57451..57561,57776..>57894)	Acanthamoeba castellanii str. Neff	14921373
ACA1_098900	mRNA	ACA1_098900	NW_004457582.1	58808	60042	R	ACA1_098900	complement(join(<58808..58872,58938..>60042))	Acanthamoeba castellanii str. Neff	14921374
ACA1_098910	mRNA	ACA1_098910	NW_004457582.1	60297	61640	R	ACA1_098910	complement(join(<60297..61019,61122..61209,61301..61403,61538..>61640))	Acanthamoeba castellanii str. Neff	14921375
ACA1_098920	mRNA	ACA1_098920	NW_004457582.1	61882	66676	R	ACA1_098920	complement(join(<61882..61942,62076..62488,62568..62705,62820..62945,63055..63270,63350..63420,63513..63660,63774..63898,64016..64080,64187..64249,64355..64452,64613..64669,64767..64874,64962..65039,65150..65260,65370..65476,65578..65703,65835..66384,66554..>66676))	Acanthamoeba castellanii str. Neff	14921376
ACA1_098930	mRNA	ACA1_098930	NW_004457582.1	67444	71922	R	ACA1_098930	complement(join(<67444..67562,67646..67801,67868..68043,68155..68314,68350..68578,68683..68872,68974..69086,69147..69265,69427..69570,69685..69815,69907..69989,70091..70356,70476..70550,70627..70749,70852..70938,71025..71046,71068..71112,71219..71356,71461..71507,71591..71687,71842..>71922))	Acanthamoeba castellanii str. Neff	14921377
ACA1_098950	mRNA	ACA1_098950	NW_004457582.1	73739	74035	D	ACA1_098950	join(<73739..73861,73928..>74035)	Acanthamoeba castellanii str. Neff	14921379
ACA1_098960	mRNA	ACA1_098960	NW_004457582.1	74137	75606	D	ACA1_098960	join(<74137..74775,74868..75048,75140..75228,75301..>75606)	Acanthamoeba castellanii str. Neff	14921380
ACA1_098970	mRNA	ACA1_098970	NW_004457582.1	76040	76715	R	ACA1_098970	complement(join(<76040..76202,76280..76366,76459..76542,76609..>76715))	Acanthamoeba castellanii str. Neff	14921381
ACA1_098980	mRNA	ACA1_098980	NW_004457582.1	76797	82225	R	ACA1_098980	complement(join(<76797..79001,79148..79188,79295..79520,79621..79740,79818..81560,81654..81958,82162..>82225))	Acanthamoeba castellanii str. Neff	14921382
ACA1_098990	mRNA	ACA1_098990	NW_004457582.1	82796	85415	R	ACA1_098990	complement(join(<82796..85161,85284..85350,85410..>85415))	Acanthamoeba castellanii str. Neff	14921383
ACA1_099100	mRNA	ACA1_099100	NW_004457582.1	88708	92761	D	ACA1_099100	join(<88708..88800,88982..89008,89108..89202,89318..89429,89504..89611,89696..89827,89917..89969,90059..90167,90246..90371,90464..90534,90648..90912,91012..91129,91198..91961,92034..92130,92229..92401,92472..92615,92729..>92761)	Acanthamoeba castellanii str. Neff	14921384
ACA1_099210	mRNA	ACA1_099210	NW_004457582.1	95237	95749	D	ACA1_099210	join(<95237..95301,95321..95625,95685..>95749)	Acanthamoeba castellanii str. Neff	14921385
ACA1_099220	mRNA	ACA1_099220	NW_004457582.1	96276	97550	D	ACA1_099220	join(<96276..96421,96508..96577,96655..96731,96806..96881,96947..97072,97156..97355,97484..>97550)	Acanthamoeba castellanii str. Neff	14921386
ACA1_099230	mRNA	ACA1_099230	NW_004457582.1	97977	98529	R	ACA1_099230	complement(join(<97977..98067,98153..98216,98313..>98529))	Acanthamoeba castellanii str. Neff	14921387
ACA1_099240	mRNA	ACA1_099240	NW_004457582.1	99594	100513	D	ACA1_099240	join(<99594..99725,99753..99810,100100..100278,100388..>100513)	Acanthamoeba castellanii str. Neff	14921388
ACA1_099250	mRNA	ACA1_099250	NW_004457582.1	100641	101567	R	ACA1_099250	complement(<100641..>101567)	Acanthamoeba castellanii str. Neff	14921389
ACA1_099260	mRNA	ACA1_099260	NW_004457582.1	101918	103201	D	ACA1_099260	join(<101918..102386,102474..>103201)	Acanthamoeba castellanii str. Neff	14921390
ACA1_105130	mRNA	ACA1_105130	NW_004457581.1	58	1057	R	ACA1_105130	complement(join(<58..330,414..557,632..801,875..946,1009..>1057))	Acanthamoeba castellanii str. Neff	14921352
ACA1_105240	mRNA	ACA1_105240	NW_004457581.1	6643	7159	D	ACA1_105240	join(<6643..6817,6876..6937,6980..>7159)	Acanthamoeba castellanii str. Neff	14921349
ACA1_105260	mRNA	ACA1_105260	NW_004457581.1	11017	11454	R	ACA1_105260	complement(<11017..>11454)	Acanthamoeba castellanii str. Neff	14921351
ACA1_039620	mRNA	ACA1_039620	NW_004457579.1	148	4617	R	ACA1_039620	complement(join(<148..265,350..457,524..631,723..1053,1137..1200,1213..1263,1395..1478,1613..1872,1941..2203,2284..2358,2493..2624,2705..2789,2895..3015,3140..3316,3391..3469,3559..3646,3727..3837,3922..4004,4136..4293,4612..>4617))	Acanthamoeba castellanii str. Neff	14921346
ACA1_039630	mRNA	ACA1_039630	NW_004457579.1	4998	5513	R	ACA1_039630	complement(<4998..>5513)	Acanthamoeba castellanii str. Neff	14921343
ACA1_039640	mRNA	ACA1_039640	NW_004457579.1	5973	10933	D	ACA1_039640	join(<5973..6183,6295..8039,8053..9053,9555..9758,9816..9911,10011..10128,10276..10422,10498..10621,10714..10825,10855..>10933)	Acanthamoeba castellanii str. Neff	14921347
ACA1_039650	mRNA	ACA1_039650	NW_004457579.1	12248	13529	R	ACA1_039650	complement(join(<12248..12375,12461..12784,12936..13054,13160..13237,13357..>13529))	Acanthamoeba castellanii str. Neff	14921348
ACA1_039660	mRNA	ACA1_039660	NW_004457579.1	14339	18595	D	ACA1_039660	join(<14339..14445,14609..14713,14936..15099,15251..15682,15770..16427,16500..16774,16891..17072,17196..17295,17385..18104,18176..18290,18382..>18595)	Acanthamoeba castellanii str. Neff	14921344
ACA1_039770	mRNA	ACA1_039770	NW_004457579.1	30194	30525	D	ACA1_039770	join(<30194..30353,30413..>30525)	Acanthamoeba castellanii str. Neff	14921345
ACA1_000790	mRNA	ACA1_000790	NW_004457578.1	5136	5699	D	ACA1_000790	<5136..>5699	Acanthamoeba castellanii str. Neff	14921342
ACA1_000800	mRNA	ACA1_000800	NW_004457578.1	6120	6801	R	ACA1_000800	complement(join(<6120..6344,6410..6547,6685..>6801))	Acanthamoeba castellanii str. Neff	14921340
ACA1_000810	mRNA	ACA1_000810	NW_004457578.1	7075	7588	R	ACA1_000810	complement(join(<7075..7179,7300..7397,7546..>7588))	Acanthamoeba castellanii str. Neff	14921341
ACA1_000820	mRNA	ACA1_000820	NW_004457578.1	8485	13504	D	ACA1_000820	join(<8485..8859,8940..9107,9183..9531,9607..9709,9796..9880,9954..10098,10169..10871,10966..11325,11406..11481,11598..11656,11730..11787,11884..11937,12025..12171,12195..12263,12354..12444,12537..12597,12672..12784,12856..12947,13040..13124,13205..13273,13371..>13504)	Acanthamoeba castellanii str. Neff	14921337
ACA1_000830	mRNA	ACA1_000830	NW_004457578.1	13654	14449	R	ACA1_000830	complement(join(<13654..13931,14041..>14449))	Acanthamoeba castellanii str. Neff	14921338
ACA1_000840	mRNA	ACA1_000840	NW_004457578.1	15125	16896	D	ACA1_000840	join(<15125..15347,15452..15567,15655..15778,15908..16204,16354..16506,16654..16755,16844..>16896)	Acanthamoeba castellanii str. Neff	14921339
ACA1_302700	mRNA	ACA1_302700	NW_004457577.1	5631	7802	R	ACA1_302700	complement(join(<5631..5777,5892..5946,6088..6182,6255..6350,6517..6592,6659..6780,6864..7242,7351..>7802))	Acanthamoeba castellanii str. Neff	14921336
ACA1_302810	mRNA	ACA1_302810	NW_004457577.1	11128	14358	D	ACA1_302810	join(<11128..11156,11194..11276,11404..11529,11718..11780,11890..11953,12127..12313,12458..12547,12725..12781,12944..12986,13169..13242,13366..13410,13643..13720,13882..14019,14215..>14358)	Acanthamoeba castellanii str. Neff	14921335
ACA1_317650	mRNA	ACA1_317650	NW_004457575.1	1505	1895	R	ACA1_317650	complement(join(<1505..1649,1726..>1895))	Acanthamoeba castellanii str. Neff	14921333
ACA1_317660	mRNA	ACA1_317660	NW_004457575.1	2277	2642	R	ACA1_317660	complement(<2277..>2642)	Acanthamoeba castellanii str. Neff	14921334
ACA1_317670	mRNA	ACA1_317670	NW_004457575.1	2964	4082	R	ACA1_317670	complement(join(<2964..3553,3626..>4082))	Acanthamoeba castellanii str. Neff	14921331
ACA1_205660	mRNA	ACA1_205660	NW_004457574.1	21351	22805	D	ACA1_205660	join(<21351..21775,21862..22249,22373..22431,22469..>22805)	Acanthamoeba castellanii str. Neff	14921330
ACA1_205670	mRNA	ACA1_205670	NW_004457574.1	22927	25702	R	ACA1_205670	complement(join(<22927..23050,23139..23213,23312..23568,23679..23820,24117..24351,24469..24605,24712..24785,24955..25140,25293..25367,25462..25542,25634..>25702))	Acanthamoeba castellanii str. Neff	14921305
ACA1_205780	mRNA	ACA1_205780	NW_004457574.1	27227	27870	D	ACA1_205780	join(<27227..27479,27590..>27870)	Acanthamoeba castellanii str. Neff	14921306
ACA1_205890	mRNA	ACA1_205890	NW_004457574.1	29098	29332	R	ACA1_205890	complement(join(<29098..29115,29144..>29332))	Acanthamoeba castellanii str. Neff	14921307
ACA1_205900	mRNA	ACA1_205900	NW_004457574.1	31011	31637	R	ACA1_205900	complement(join(<31011..31470,31552..>31637))	Acanthamoeba castellanii str. Neff	14921308
ACA1_205910	mRNA	ACA1_205910	NW_004457574.1	32560	35020	D	ACA1_205910	join(<32560..32912,33005..33967,34056..34443,34574..>35020)	Acanthamoeba castellanii str. Neff	14921309
ACA1_205920	mRNA	ACA1_205920	NW_004457574.1	35139	39515	R	ACA1_205920	complement(join(<35139..35262,35348..35422,35522..35778,35871..36012,36084..36178,36343..36422,36514..36611,36671..36831,36977..37085,37178..37300,37395..37509,37613..37843,37971..38107,38229..38302,38430..38615,38736..38810,38888..38968,39068..39154,39236..39377,39490..>39515))	Acanthamoeba castellanii str. Neff	14921310
ACA1_205940	mRNA	ACA1_205940	NW_004457574.1	40788	42026	D	ACA1_205940	join(<40788..41207,41313..>42026)	Acanthamoeba castellanii str. Neff	14921312
ACA1_205950	mRNA	ACA1_205950	NW_004457574.1	42098	42751	R	ACA1_205950	complement(join(<42098..42258,42380..42548,42629..>42751))	Acanthamoeba castellanii str. Neff	14921313
ACA1_205960	mRNA	ACA1_205960	NW_004457574.1	42929	54445	R	ACA1_205960	complement(join(<42929..43348,43385..43414,43526..43627,43743..44211,44336..44435,44519..44607,44690..44930,45003..45154,45240..45381,45394..45516,45657..45951,46025..46218,46341..46420,46473..46636,46725..46898,46988..47145,47215..47360,47388..48330,48484..49801,49996..50241,50333..50438,50524..50678,50778..50936,51027..51167,51225..51374,51453..51573,51675..51768,51835..51949,52027..52134,52215..52474,52556..52618,52691..52905,52983..53069,53148..53422,53497..53622,53709..53852,53928..54026,54103..54336,54404..>54445))	Acanthamoeba castellanii str. Neff	14921314
ACA1_205970	mRNA	ACA1_205970	NW_004457574.1	54674	55936	R	ACA1_205970	complement(join(<54674..54691,54721..54813,54888..55024,55107..55230,55302..55411,55478..55683,55773..>55936))	Acanthamoeba castellanii str. Neff	14921315
ACA1_205980	mRNA	ACA1_205980	NW_004457574.1	56468	57789	D	ACA1_205980	join(<56468..56686,56806..56914,57002..57122,57198..57311,57416..57600,57692..>57789)	Acanthamoeba castellanii str. Neff	14921316
ACA1_205990	mRNA	ACA1_205990	NW_004457574.1	57868	60398	R	ACA1_205990	complement(join(<57868..57902,57969..58197,58289..58381,58446..58590,58671..58768,58850..58986,59086..59140,59217..59320,59400..59613,59773..59856,59932..59996,60061..60109,60234..>60398))	Acanthamoeba castellanii str. Neff	14921317
ACA1_206000	mRNA	ACA1_206000	NW_004457574.1	60576	61399	D	ACA1_206000	join(<60576..60822,61009..61166,61286..>61399)	Acanthamoeba castellanii str. Neff	14921318
ACA1_206010	mRNA	ACA1_206010	NW_004457574.1	61532	63060	R	ACA1_206010	complement(join(<61532..61625,61702..61835,61895..61938,62007..62114,62178..62213,62289..62316,62383..62430,62497..62573,62870..62979,63044..>63060))	Acanthamoeba castellanii str. Neff	14921319
ACA1_206020	mRNA	ACA1_206020	NW_004457574.1	63415	65376	D	ACA1_206020	join(<63415..63837,63923..64094,64306..64574,64647..64739,64830..64922,65025..65253,65357..>65376)	Acanthamoeba castellanii str. Neff	14921320
ACA1_206030	mRNA	ACA1_206030	NW_004457574.1	65779	67719	D	ACA1_206030	join(<65779..65867,65935..66013,66129..66261,66428..66654,66731..66813,66919..67020,67231..67271,67383..67566,67662..>67719)	Acanthamoeba castellanii str. Neff	14921321
ACA1_206040	mRNA	ACA1_206040	NW_004457574.1	68241	69922	D	ACA1_206040	join(<68241..68261,68344..68626,68717..68855,68949..69190,69283..69410,69494..>69922)	Acanthamoeba castellanii str. Neff	14921322
ACA1_206050	mRNA	ACA1_206050	NW_004457574.1	70041	71472	D	ACA1_206050	join(<70041..70165,70254..70428,70491..70583,70670..70790,70864..71084,71166..71228,71335..>71472)	Acanthamoeba castellanii str. Neff	14921323
ACA1_206060	mRNA	ACA1_206060	NW_004457574.1	71557	72738	D	ACA1_206060	join(<71557..71647,71727..71787,71869..71992,72082..72230,72313..72402,72474..>72738)	Acanthamoeba castellanii str. Neff	14921324
ACA1_206070	mRNA	ACA1_206070	NW_004457574.1	73299	74350	D	ACA1_206070	join(<73299..73369,73444..73545,73617..73862,73934..74023,74101..>74350)	Acanthamoeba castellanii str. Neff	14921325
ACA1_206080	mRNA	ACA1_206080	NW_004457574.1	74459	75094	R	ACA1_206080	complement(<74459..>75094)	Acanthamoeba castellanii str. Neff	14921326
ACA1_206090	mRNA	ACA1_206090	NW_004457574.1	77171	78091	D	ACA1_206090	join(<77171..77210,77319..77539,77664..77933,78015..>78091)	Acanthamoeba castellanii str. Neff	14921327
ACA1_206200	mRNA	ACA1_206200	NW_004457574.1	79943	80415	D	ACA1_206200	join(<79943..80049,80116..80197,80278..>80415)	Acanthamoeba castellanii str. Neff	14921328
ACA1_206210	mRNA	ACA1_206210	NW_004457574.1	80751	81297	R	ACA1_206210	complement(join(<80751..81104,81211..>81297))	Acanthamoeba castellanii str. Neff	14921329
ACA1_194500	mRNA	ACA1_194500	NW_004457573.1	1778	4281	D	ACA1_194500	join(<1778..1840,1933..2004,2118..2255,2348..2656,2958..3088,3187..3380,3487..3596,3673..>4281)	Acanthamoeba castellanii str. Neff	14921304
ACA1_194610	mRNA	ACA1_194610	NW_004457573.1	4312	8253	D	ACA1_194610	join(<4312..4436,4543..5056,5163..5279,5368..5729,5847..6000,6088..6243,6313..6410,6475..6639,6731..6884,6979..7087,7179..7828,7886..8000,8147..>8253)	Acanthamoeba castellanii str. Neff	14921265
ACA1_194720	mRNA	ACA1_194720	NW_004457573.1	9434	9630	R	ACA1_194720	complement(join(<9434..9596,9611..>9630))	Acanthamoeba castellanii str. Neff	14921275
ACA1_194830	mRNA	ACA1_194830	NW_004457573.1	12493	12972	D	ACA1_194830	<12493..>12972	Acanthamoeba castellanii str. Neff	14921276
ACA1_194840	mRNA	ACA1_194840	NW_004457573.1	13484	13924	D	ACA1_194840	join(<13484..13590,13612..>13924)	Acanthamoeba castellanii str. Neff	14921266
ACA1_194850	mRNA	ACA1_194850	NW_004457573.1	13988	14809	D	ACA1_194850	<13988..>14809	Acanthamoeba castellanii str. Neff	14921267
ACA1_194860	mRNA	ACA1_194860	NW_004457573.1	15313	17185	R	ACA1_194860	complement(join(<15313..15494,15609..15760,15916..16018,16110..16238,16370..16454,16792..16892,17014..>17185))	Acanthamoeba castellanii str. Neff	14921268
ACA1_194870	mRNA	ACA1_194870	NW_004457573.1	17660	20028	D	ACA1_194870	join(<17660..17714,17806..17851,17948..18073,18147..18274,18613..18672,18758..18868,18963..19060,19139..19289,19370..19445,19569..>20028)	Acanthamoeba castellanii str. Neff	14921269
ACA1_194880	mRNA	ACA1_194880	NW_004457573.1	20217	21788	R	ACA1_194880	complement(join(<20217..20388,20456..20594,20667..20779,20890..21001,21090..21134,21215..21322,21384..21493,21592..>21788))	Acanthamoeba castellanii str. Neff	14921270
ACA1_194890	mRNA	ACA1_194890	NW_004457573.1	22992	26341	R	ACA1_194890	complement(join(<22992..23147,23264..23358,23437..23536,23660..23739,23825..23893,23968..24109,24180..24287,24395..24477,24677..24734,24817..24941,25053..25188,25300..25407,25486..25556,25849..25882,25970..26044,26141..26192,26271..>26341))	Acanthamoeba castellanii str. Neff	14921271
ACA1_194900	mRNA	ACA1_194900	NW_004457573.1	26642	27272	R	ACA1_194900	complement(join(<26642..26782,27195..>27272))	Acanthamoeba castellanii str. Neff	14921272
ACA1_194910	mRNA	ACA1_194910	NW_004457573.1	27740	30505	R	ACA1_194910	complement(join(<27740..27839,27924..28018,28081..28154,28252..28392,28488..28590,28619..28813,28892..28941,29034..29181,29244..29469,29547..29626,29715..29778,29850..30034,30161..30299,30378..>30505))	Acanthamoeba castellanii str. Neff	14921273
ACA1_194920	mRNA	ACA1_194920	NW_004457573.1	30998	32177	D	ACA1_194920	join(<30998..31340,31418..31488,31595..31724,31853..32010,32130..>32177)	Acanthamoeba castellanii str. Neff	14921274
ACA1_194930	mRNA	ACA1_194930	NW_004457573.1	32463	34700	D	ACA1_194930	join(<32463..32581,32931..33301,33409..33543,33644..34080,34185..>34700)	Acanthamoeba castellanii str. Neff	14921277
ACA1_194940	mRNA	ACA1_194940	NW_004457573.1	34812	36916	R	ACA1_194940	complement(join(<34812..34979,35061..35175,35229..35287,35384..35515,35582..35681,35759..35878,35957..36061,36166..36220,36293..36379,36466..36538,36653..>36916))	Acanthamoeba castellanii str. Neff	14921278
ACA1_194950	mRNA	ACA1_194950	NW_004457573.1	37088	37542	D	ACA1_194950	join(<37088..37185,37245..37306,37421..>37542)	Acanthamoeba castellanii str. Neff	14921279
ACA1_194960	mRNA	ACA1_194960	NW_004457573.1	37617	42177	D	ACA1_194960	join(<37617..37823,37901..37999,38066..38161,38240..38336,38415..38512,38592..38723,38801..38908,38981..39088,39170..39247,39328..39465,39562..39755,39906..40091,40147..40388,40456..40693,40773..40896,41001..41166,41255..41331,41413..41513,41583..41783,41874..>42177)	Acanthamoeba castellanii str. Neff	14921280
ACA1_194970	mRNA	ACA1_194970	NW_004457573.1	42514	44409	D	ACA1_194970	join(<42514..42596,42679..42888,43029..43159,43278..43285,43364..43490,43568..43658,43748..43802,43877..44020,44109..44186,44287..>44409)	Acanthamoeba castellanii str. Neff	14921281
ACA1_194980	mRNA	ACA1_194980	NW_004457573.1	44605	45972	R	ACA1_194980	complement(join(<44605..44768,44861..44914,44998..45454,45718..>45972))	Acanthamoeba castellanii str. Neff	14921282
ACA1_194990	mRNA	ACA1_194990	NW_004457573.1	46146	47604	D	ACA1_194990	join(<46146..46283,46375..46499,46584..46674,46770..46838,46915..47053,47085..47397,47484..47579,47598..>47604)	Acanthamoeba castellanii str. Neff	14921283
ACA1_195000	mRNA	ACA1_195000	NW_004457573.1	47733	54045	D	ACA1_195000	join(<47733..47901,48027..48091,48174..48662,48752..48880,48979..49150,49243..49682,49793..49904,50011..50231,50322..50633,50719..50904,51023..51140,51215..51440,51520..51670,51777..52302,52405..52667,52750..52840,52923..53109,53192..53375,53458..53538,53630..53740,53833..>54045)	Acanthamoeba castellanii str. Neff	14921284
ACA1_195010	mRNA	ACA1_195010	NW_004457573.1	54262	54672	R	ACA1_195010	complement(<54262..>54672)	Acanthamoeba castellanii str. Neff	14921285
ACA1_195020	mRNA	ACA1_195020	NW_004457573.1	54800	57975	D	ACA1_195020	join(<54800..54988,55088..55306,55410..55518,55605..55716,55791..56250,56325..56476,56565..56675,56775..56974,57047..57570,57655..57768,57859..>57975)	Acanthamoeba castellanii str. Neff	14921286
ACA1_195030	mRNA	ACA1_195030	NW_004457573.1	58330	59239	D	ACA1_195030	join(<58330..58469,58576..58733,58874..58960,59061..>59239)	Acanthamoeba castellanii str. Neff	14921287
ACA1_195040	mRNA	ACA1_195040	NW_004457573.1	59466	60334	D	ACA1_195040	join(<59466..59624,59738..59829,59929..60020,60120..>60334)	Acanthamoeba castellanii str. Neff	14921288
ACA1_195050	mRNA	ACA1_195050	NW_004457573.1	60807	61971	D	ACA1_195050	join(<60807..60910,60995..61113,61195..61274,61371..61450,61530..61677,61795..>61971)	Acanthamoeba castellanii str. Neff	14921289
ACA1_195060	mRNA	ACA1_195060	NW_004457573.1	62102	64194	R	ACA1_195060	complement(join(<62102..62146,62216..62486,62632..63010,63117..63228,63311..63894,63983..64036,64110..>64194))	Acanthamoeba castellanii str. Neff	14921290
ACA1_195170	mRNA	ACA1_195170	NW_004457573.1	68010	68159	R	ACA1_195170	complement(<68010..>68159)	Acanthamoeba castellanii str. Neff	14921291
ACA1_195180	mRNA	ACA1_195180	NW_004457573.1	68581	69531	R	ACA1_195180	complement(<68581..>69531)	Acanthamoeba castellanii str. Neff	14921292
ACA1_195190	mRNA	ACA1_195190	NW_004457573.1	69716	70607	D	ACA1_195190	join(<69716..70142,70237..70353,70426..>70607)	Acanthamoeba castellanii str. Neff	14921293
ACA1_195200	mRNA	ACA1_195200	NW_004457573.1	70675	73905	D	ACA1_195200	join(<70675..71407,71499..71938,72019..72092,72175..72263,72341..72448,72533..72649,72726..72843,72918..73121,73217..73328,73405..>73905)	Acanthamoeba castellanii str. Neff	14921294
ACA1_195210	mRNA	ACA1_195210	NW_004457573.1	74116	75090	R	ACA1_195210	complement(<74116..>75090)	Acanthamoeba castellanii str. Neff	14921295
ACA1_195220	mRNA	ACA1_195220	NW_004457573.1	75706	76847	R	ACA1_195220	complement(join(<75706..75848,75971..76232,76326..76435,76516..76782,76829..>76847))	Acanthamoeba castellanii str. Neff	14921296
ACA1_195230	mRNA	ACA1_195230	NW_004457573.1	77381	81666	D	ACA1_195230	join(<77381..77759,77843..>81666)	Acanthamoeba castellanii str. Neff	14921297
ACA1_195240	mRNA	ACA1_195240	NW_004457573.1	82018	82528	D	ACA1_195240	join(<82018..82355,82411..>82528)	Acanthamoeba castellanii str. Neff	14921298
ACA1_195250	mRNA	ACA1_195250	NW_004457573.1	82581	84086	D	ACA1_195250	join(<82581..82635,82740..82816,82886..82999,83076..83401,83479..83563,83624..83740,83823..>84086)	Acanthamoeba castellanii str. Neff	14921299
ACA1_195260	mRNA	ACA1_195260	NW_004457573.1	84890	86972	D	ACA1_195260	join(<84890..85015,85072..85165,85349..85614,85691..85826,85950..86026,86086..86246,86306..86359,86563..86741,86830..86930,86952..>86972)	Acanthamoeba castellanii str. Neff	14921300
ACA1_195270	mRNA	ACA1_195270	NW_004457573.1	87250	87779	D	ACA1_195270	join(<87250..87373,87446..87502,87631..>87779)	Acanthamoeba castellanii str. Neff	14921301
ACA1_195280	mRNA	ACA1_195280	NW_004457573.1	87880	91054	D	ACA1_195280	join(<87880..87990,88009..88083,88094..88448,88518..88762,88845..89398,89470..89586,89599..89698,89806..89898,89978..>91054)	Acanthamoeba castellanii str. Neff	14921302
ACA1_195290	mRNA	ACA1_195290	NW_004457573.1	91130	92613	R	ACA1_195290	complement(join(<91130..91422,91488..91667,91737..92034,92164..92249,92332..92375,92462..>92613))	Acanthamoeba castellanii str. Neff	14921303
ACA1_352610	mRNA	ACA1_352610	NW_004457572.1	1630	5859	D	ACA1_352610	<1630..>5859	Acanthamoeba castellanii str. Neff	14921263
ACA1_352720	mRNA	ACA1_352720	NW_004457572.1	8759	9406	D	ACA1_352720	join(<8759..8920,8990..>9406)	Acanthamoeba castellanii str. Neff	14921264
ACA1_352730	mRNA	ACA1_352730	NW_004457572.1	11335	12144	D	ACA1_352730	join(<11335..11380,11437..11453,11546..11633,11872..11968,12054..>12144)	Acanthamoeba castellanii str. Neff	14921260
ACA1_352740	mRNA	ACA1_352740	NW_004457572.1	12212	12624	R	ACA1_352740	complement(join(<12212..12272,12479..>12624))	Acanthamoeba castellanii str. Neff	14921261
ACA1_352750	mRNA	ACA1_352750	NW_004457572.1	13470	15208	D	ACA1_352750	join(<13470..14733,14751..>15208)	Acanthamoeba castellanii str. Neff	14921262
ACA1_338740	mRNA	ACA1_338740	NW_004457570.1	22	745	D	ACA1_338740	join(<22..90,155..525,616..>745)	Acanthamoeba castellanii str. Neff	14921259
ACA1_338750	mRNA	ACA1_338750	NW_004457570.1	853	1166	R	ACA1_338750	complement(join(<853..1012,1027..>1166))	Acanthamoeba castellanii str. Neff	14921246
ACA1_338760	mRNA	ACA1_338760	NW_004457570.1	1275	2171	D	ACA1_338760	<1275..>2171	Acanthamoeba castellanii str. Neff	14921243
ACA1_338770	mRNA	ACA1_338770	NW_004457570.1	3187	4338	D	ACA1_338770	<3187..>4338	Acanthamoeba castellanii str. Neff	14921244
ACA1_338780	mRNA	ACA1_338780	NW_004457570.1	5214	5583	R	ACA1_338780	complement(join(<5214..5231,5242..5314,5396..>5583))	Acanthamoeba castellanii str. Neff	14921245
ACA1_338790	mRNA	ACA1_338790	NW_004457570.1	7001	7264	R	ACA1_338790	complement(<7001..>7264)	Acanthamoeba castellanii str. Neff	14921241
ACA1_338800	mRNA	ACA1_338800	NW_004457570.1	9867	12033	R	ACA1_338800	complement(join(<9867..9916,10060..10413,10711..10794,10871..11028,11133..11238,11327..11491,11598..11820,11836..11913,11986..>12033))	Acanthamoeba castellanii str. Neff	14921242
ACA1_338910	mRNA	ACA1_338910	NW_004457570.1	12692	14430	R	ACA1_338910	complement(join(<12692..12803,12922..13022,13038..13488,13499..13910,13986..14148,14236..>14430))	Acanthamoeba castellanii str. Neff	14921247
ACA1_338920	mRNA	ACA1_338920	NW_004457570.1	16626	17711	R	ACA1_338920	complement(join(<16626..16808,16824..17012,17069..17330,17584..>17711))	Acanthamoeba castellanii str. Neff	14921248
ACA1_338930	mRNA	ACA1_338930	NW_004457570.1	19368	21371	D	ACA1_338930	join(<19368..19609,19624..20027,20138..20185,21002..21169,21235..>21371)	Acanthamoeba castellanii str. Neff	14921249
ACA1_338940	mRNA	ACA1_338940	NW_004457570.1	22249	22991	D	ACA1_338940	join(<22249..22309,22365..22495,22778..22867,22941..>22991)	Acanthamoeba castellanii str. Neff	14921250
ACA1_338950	mRNA	ACA1_338950	NW_004457570.1	22910	23719	R	ACA1_338950	complement(<22910..>23719)	Acanthamoeba castellanii str. Neff	14921251
ACA1_338960	mRNA	ACA1_338960	NW_004457570.1	24246	24581	D	ACA1_338960	<24246..>24581	Acanthamoeba castellanii str. Neff	14921252
ACA1_338970	mRNA	ACA1_338970	NW_004457570.1	25301	25879	R	ACA1_338970	complement(join(<25301..25579,25592..>25879))	Acanthamoeba castellanii str. Neff	14921253
ACA1_338980	mRNA	ACA1_338980	NW_004457570.1	25965	27380	R	ACA1_338980	complement(<25965..>27380)	Acanthamoeba castellanii str. Neff	14921254
ACA1_338990	mRNA	ACA1_338990	NW_004457570.1	27469	27987	R	ACA1_338990	complement(<27469..>27987)	Acanthamoeba castellanii str. Neff	14921255
ACA1_339000	mRNA	ACA1_339000	NW_004457570.1	28559	28933	R	ACA1_339000	complement(join(<28559..28749,28819..>28933))	Acanthamoeba castellanii str. Neff	14921256
ACA1_339010	mRNA	ACA1_339010	NW_004457570.1	30314	31208	R	ACA1_339010	complement(join(<30314..30416,30612..30761,30780..30943,31029..>31208))	Acanthamoeba castellanii str. Neff	14921257
ACA1_339020	mRNA	ACA1_339020	NW_004457570.1	31220	31984	R	ACA1_339020	complement(<31220..>31984)	Acanthamoeba castellanii str. Neff	14921258
ACA1_184590	mRNA	ACA1_184590	NW_004457568.1	95	1721	R	ACA1_184590	complement(join(<95..336,365..452,537..600,686..816,862..1035,1138..1282,1399..>1721))	Acanthamoeba castellanii str. Neff	14921240
ACA1_184600	mRNA	ACA1_184600	NW_004457568.1	1868	5819	R	ACA1_184600	complement(join(<1868..2108,2196..2306,2322..2346,2424..2532,2613..2688,2761..2842,2942..3038,3120..3175,3236..3319,3395..3656,3718..3790,3879..3936,4044..4218,4292..4633,4705..4768,4837..4967,5081..5215,5294..5438,5521..>5819))	Acanthamoeba castellanii str. Neff	14921157
ACA1_184610	mRNA	ACA1_184610	NW_004457568.1	6617	10186	D	ACA1_184610	join(<6617..6795,6809..6815,6992..7262,7359..7771,7894..8074,8148..8866,8947..9024,9124..9232,9347..9779,9859..>10186)	Acanthamoeba castellanii str. Neff	14921158
ACA1_184620	mRNA	ACA1_184620	NW_004457568.1	10295	11788	D	ACA1_184620	join(<10295..10427,10569..10660,10779..11001,11115..11199,11235..11327,11433..11493,11597..>11788)	Acanthamoeba castellanii str. Neff	14921159
ACA1_184630	mRNA	ACA1_184630	NW_004457568.1	11927	13472	D	ACA1_184630	join(<11927..12191,12297..12337,12408..12527,12571..12813,12825..13079,13168..13262,13328..>13472)	Acanthamoeba castellanii str. Neff	14921160
ACA1_184640	mRNA	ACA1_184640	NW_004457568.1	13564	14816	D	ACA1_184640	join(<13564..13917,14020..14181,14247..14379,14469..14635,14706..>14816)	Acanthamoeba castellanii str. Neff	14921161
ACA1_184650	mRNA	ACA1_184650	NW_004457568.1	15012	27371	R	ACA1_184650	complement(<15012..>27371)	Acanthamoeba castellanii str. Neff	14921162
ACA1_184670	mRNA	ACA1_184670	NW_004457568.1	29543	32738	D	ACA1_184670	join(<29543..29690,30018..30159,30279..30388,30468..30553,30632..30706,30821..31467,31555..31666,31734..31820,31900..32117,32189..32458,32609..>32738)	Acanthamoeba castellanii str. Neff	14921164
ACA1_184680	mRNA	ACA1_184680	NW_004457568.1	33252	39127	D	ACA1_184680	join(<33252..33420,33516..33595,33675..33740,33795..33863,33934..34021,34118..34204,34291..34408,34487..34604,34709..34882,34974..35133,35210..35293,35422..35510,35618..35703,35787..35890,35990..36045,36160..36230,36342..36495,36640..36738,36834..36960,37054..37131,37214..37284,37479..37732,37829..37958,38053..38148,38264..38421,38492..38666,38788..38910,38999..>39127)	Acanthamoeba castellanii str. Neff	14921165
ACA1_184690	mRNA	ACA1_184690	NW_004457568.1	39231	40810	R	ACA1_184690	complement(join(<39231..39404,39482..39585,39687..39856,39940..40317,40446..>40810))	Acanthamoeba castellanii str. Neff	14921166
ACA1_184700	mRNA	ACA1_184700	NW_004457568.1	41025	46454	D	ACA1_184700	join(<41025..41063,41193..41255,41366..41446,41634..41738,41807..41876,41957..42258,42349..42378,42515..42584,42668..42764,42878..42976,43107..43193,43291..43461,43613..43734,43819..44050,44140..44292,44412..44606,44681..44749,44825..45074,45189..45337,45460..45569,45729..46156,46287..>46454)	Acanthamoeba castellanii str. Neff	14921167
ACA1_184710	mRNA	ACA1_184710	NW_004457568.1	46837	47936	D	ACA1_184710	join(<46837..46985,47084..47445,47548..>47936)	Acanthamoeba castellanii str. Neff	14921168
ACA1_184720	mRNA	ACA1_184720	NW_004457568.1	48501	51207	D	ACA1_184720	join(<48501..48761,48867..48961,49094..49313,49415..49475,49572..49741,49835..49946,50034..50180,50252..50307,50450..50619,50716..50882,50978..>51207)	Acanthamoeba castellanii str. Neff	14921169
ACA1_184730	mRNA	ACA1_184730	NW_004457568.1	51687	52577	R	ACA1_184730	complement(<51687..>52577)	Acanthamoeba castellanii str. Neff	14921170
ACA1_184740	mRNA	ACA1_184740	NW_004457568.1	54300	55301	R	ACA1_184740	complement(join(<54300..54530,54654..>55301))	Acanthamoeba castellanii str. Neff	14921171
ACA1_184750	mRNA	ACA1_184750	NW_004457568.1	55777	56265	D	ACA1_184750	<55777..>56265	Acanthamoeba castellanii str. Neff	14921172
ACA1_184760	mRNA	ACA1_184760	NW_004457568.1	56449	57292	R	ACA1_184760	complement(join(<56449..56806,56883..>57292))	Acanthamoeba castellanii str. Neff	14921173
ACA1_184770	mRNA	ACA1_184770	NW_004457568.1	57596	60723	R	ACA1_184770	complement(join(<57596..57717,57844..58005,58073..58348,58430..58538,58649..58831,58909..59063,59163..59281,59385..59454,59586..59672,59839..59935,60012..60145,60334..60417,60507..>60723))	Acanthamoeba castellanii str. Neff	14921174
ACA1_184780	mRNA	ACA1_184780	NW_004457568.1	60928	62785	D	ACA1_184780	join(<60928..60981,61186..61250,61368..61444,61561..61646,61728..61900,62000..62108,62207..62356,62480..62592,62671..>62785)	Acanthamoeba castellanii str. Neff	14921175
ACA1_184890	mRNA	ACA1_184890	NW_004457568.1	64132	64435	R	ACA1_184890	complement(join(<64132..64236,64322..>64435))	Acanthamoeba castellanii str. Neff	14921176
ACA1_184900	mRNA	ACA1_184900	NW_004457568.1	64643	67544	R	ACA1_184900	complement(join(<64643..64837,64944..65447,65538..65639,65732..65824,65920..65988,66081..66223,66371..66465,66541..66599,66695..66931,67039..67172,67244..>67544))	Acanthamoeba castellanii str. Neff	14921177
ACA1_184910	mRNA	ACA1_184910	NW_004457568.1	67987	69709	R	ACA1_184910	complement(join(<67987..68310,68436..68559,68661..68786,68870..68999,69113..69356,69647..>69709))	Acanthamoeba castellanii str. Neff	14921178
ACA1_184920	mRNA	ACA1_184920	NW_004457568.1	70165	71121	D	ACA1_184920	<70165..>71121	Acanthamoeba castellanii str. Neff	14921179
ACA1_184930	mRNA	ACA1_184930	NW_004457568.1	71610	74591	D	ACA1_184930	join(<71610..71765,71895..71949,72028..72107,72186..72212,72290..72362,72453..72628,72738..72819,72909..72970,73104..73129,73210..73301,73394..73478,73584..73616,73680..73747,73823..73923,73994..74092,74211..74345,74412..>74591)	Acanthamoeba castellanii str. Neff	14921180
ACA1_185040	mRNA	ACA1_185040	NW_004457568.1	74741	76179	R	ACA1_185040	complement(join(<74741..74904,74993..75111,75241..75682,75819..75933,76069..>76179))	Acanthamoeba castellanii str. Neff	14921181
ACA1_185050	mRNA	ACA1_185050	NW_004457568.1	76618	78144	D	ACA1_185050	join(<76618..76737,76901..77049,77241..77354,77432..77513,77586..77717,77835..77915,77983..>78144)	Acanthamoeba castellanii str. Neff	14921182
ACA1_185160	mRNA	ACA1_185160	NW_004457568.1	78577	80076	D	ACA1_185160	<78577..>80076	Acanthamoeba castellanii str. Neff	14921183
ACA1_185170	mRNA	ACA1_185170	NW_004457568.1	80321	81229	D	ACA1_185170	join(<80321..80525,80651..80720,80791..80977,81098..>81229)	Acanthamoeba castellanii str. Neff	14921184
ACA1_185180	mRNA	ACA1_185180	NW_004457568.1	81424	82520	R	ACA1_185180	complement(join(<81424..81511,81595..81730,81837..81927,82012..82109,82188..82258,82333..>82520))	Acanthamoeba castellanii str. Neff	14921185
ACA1_185190	mRNA	ACA1_185190	NW_004457568.1	83229	83585	R	ACA1_185190	complement(join(<83229..83316,83398..>83585))	Acanthamoeba castellanii str. Neff	14921186
ACA1_185300	mRNA	ACA1_185300	NW_004457568.1	86602	87055	D	ACA1_185300	join(<86602..86616,86666..>87055)	Acanthamoeba castellanii str. Neff	14921187
ACA1_185310	mRNA	ACA1_185310	NW_004457568.1	88368	90439	R	ACA1_185310	complement(join(<88368..88736,88839..89044,89123..89539,89629..>90439))	Acanthamoeba castellanii str. Neff	14921188
ACA1_185320	mRNA	ACA1_185320	NW_004457568.1	92736	95739	D	ACA1_185320	join(<92736..92795,92908..93644,93741..93897,93964..94324,94441..94680,94801..95050,95072..95157,95240..>95739)	Acanthamoeba castellanii str. Neff	14921239
ACA1_185330	mRNA	ACA1_185330	NW_004457568.1	95845	96120	R	ACA1_185330	complement(<95845..>96120)	Acanthamoeba castellanii str. Neff	14921189
ACA1_185340	mRNA	ACA1_185340	NW_004457568.1	96507	97263	R	ACA1_185340	complement(join(<96507..96918,97031..97147,97229..>97263))	Acanthamoeba castellanii str. Neff	14921190
ACA1_185460	mRNA	ACA1_185460	NW_004457568.1	102850	104415	R	ACA1_185460	complement(join(<102850..102894,102962..103144,103230..103428,103518..103714,103804..103903,104075..104244,104338..>104415))	Acanthamoeba castellanii str. Neff	14921192
ACA1_185570	mRNA	ACA1_185570	NW_004457568.1	107333	108832	R	ACA1_185570	complement(join(<107333..107877,107999..108118,108191..108268,108350..108615,108690..>108832))	Acanthamoeba castellanii str. Neff	14921193
ACA1_185580	mRNA	ACA1_185580	NW_004457568.1	109411	112109	D	ACA1_185580	join(<109411..109453,109549..109683,109852..109978,110092..110230,110352..110423,110548..110623,110716..110839,110934..111026,111094..111161,111237..111295,111372..111464,111552..111593,111691..111790,111877..>112109)	Acanthamoeba castellanii str. Neff	14921194
ACA1_185590	mRNA	ACA1_185590	NW_004457568.1	112258	114046	D	ACA1_185590	join(<112258..112338,112486..112555,112688..112827,112951..113022,113798..>114046)	Acanthamoeba castellanii str. Neff	14921195
ACA1_185700	mRNA	ACA1_185700	NW_004457568.1	114463	114814	D	ACA1_185700	join(<114463..114487,114557..114636,114707..>114814)	Acanthamoeba castellanii str. Neff	14921196
ACA1_185710	mRNA	ACA1_185710	NW_004457568.1	115470	116962	D	ACA1_185710	join(<115470..115575,115684..115798,116029..116186,116313..>116962)	Acanthamoeba castellanii str. Neff	14921197
ACA1_185720	mRNA	ACA1_185720	NW_004457568.1	117455	119177	D	ACA1_185720	join(<117455..117560,117720..117834,118050..118189,118378..118598,118665..>119177)	Acanthamoeba castellanii str. Neff	14921198
ACA1_185730	mRNA	ACA1_185730	NW_004457568.1	119271	121669	D	ACA1_185730	join(<119271..119409,119497..119667,119775..119920,120026..120097,120186..120297,120415..120599,120733..120788,120862..120987,121066..121241,121336..121503,121587..>121669)	Acanthamoeba castellanii str. Neff	14921199
ACA1_185740	mRNA	ACA1_185740	NW_004457568.1	121921	129683	R	ACA1_185740	complement(join(<121921..122052,122161..122309,122387..122516,122604..122700,122803..123380,123501..123660,123754..123859,123973..124234,124323..124440,124525..124714,124790..124864,124949..125215,125332..125400,125469..126101,126172..126596,126665..126756,126845..126921,126986..127240,127346..127457,127527..127637,127703..127870,127927..127972,128276..128349,128420..128505,128575..128712,128788..128960,129055..129222,129304..>129683))	Acanthamoeba castellanii str. Neff	14921200
ACA1_185850	mRNA	ACA1_185850	NW_004457568.1	132474	132926	R	ACA1_185850	complement(<132474..>132926)	Acanthamoeba castellanii str. Neff	14921201
ACA1_185860	mRNA	ACA1_185860	NW_004457568.1	133049	133411	R	ACA1_185860	complement(<133049..>133411)	Acanthamoeba castellanii str. Neff	14921202
ACA1_185870	mRNA	ACA1_185870	NW_004457568.1	133620	137280	R	ACA1_185870	complement(join(<133620..134296,134379..134880,135006..135215,135299..135389,135461..135538,135632..135703,135776..135934,136005..136122,136181..136331,136371..136445,136529..136637,136723..136782,136850..>137280))	Acanthamoeba castellanii str. Neff	14921203
ACA1_185880	mRNA	ACA1_185880	NW_004457568.1	137352	137721	R	ACA1_185880	complement(join(<137352..137515,137574..>137721))	Acanthamoeba castellanii str. Neff	14921204
ACA1_185890	mRNA	ACA1_185890	NW_004457568.1	138216	141406	D	ACA1_185890	join(<138216..138354,138465..138588,138690..138788,138875..140466,140557..141163,141253..>141406)	Acanthamoeba castellanii str. Neff	14921205
ACA1_185910	mRNA	ACA1_185910	NW_004457568.1	142572	143044	R	ACA1_185910	complement(join(<142572..142655,142772..142861,143015..>143044))	Acanthamoeba castellanii str. Neff	14921207
ACA1_186020	mRNA	ACA1_186020	NW_004457568.1	146299	147327	R	ACA1_186020	complement(join(<146299..147118,147218..>147327))	Acanthamoeba castellanii str. Neff	14921208
ACA1_186030	mRNA	ACA1_186030	NW_004457568.1	147764	150662	R	ACA1_186030	complement(join(<147764..150320,150436..150488,150564..>150662))	Acanthamoeba castellanii str. Neff	14921209
ACA1_186050	mRNA	ACA1_186050	NW_004457568.1	155546	159879	D	ACA1_186050	join(<155546..155616,155687..155780,155859..156046,156153..156177,156210..156675,156744..157540,157657..157854,157929..158055,158139..158320,158516..159302,159405..159535,159652..>159879)	Acanthamoeba castellanii str. Neff	14921211
ACA1_186060	mRNA	ACA1_186060	NW_004457568.1	160049	161164	R	ACA1_186060	complement(join(<160049..160412,160492..160727,160850..161033,161112..>161164))	Acanthamoeba castellanii str. Neff	14921212
ACA1_186070	mRNA	ACA1_186070	NW_004457568.1	161627	164480	R	ACA1_186070	complement(join(<161627..161833,161925..162025,162106..162392,162486..162625,162710..162881,162987..163056,163128..163262,163340..163441,163521..163703,163802..>164480))	Acanthamoeba castellanii str. Neff	14921213
ACA1_186080	mRNA	ACA1_186080	NW_004457568.1	165017	165419	D	ACA1_186080	join(<165017..165193,165204..165288,165403..>165419)	Acanthamoeba castellanii str. Neff	14921214
ACA1_186090	mRNA	ACA1_186090	NW_004457568.1	166147	167301	D	ACA1_186090	join(<166147..166357,166456..166553,166714..166882,166983..167114,167201..>167301)	Acanthamoeba castellanii str. Neff	14921215
ACA1_186200	mRNA	ACA1_186200	NW_004457568.1	168330	171274	D	ACA1_186200	join(<168330..168467,168486..168927,169064..169246,169317..169418,169492..169635,169697..169766,169845..169978,170047..170087,170166..170293,170371..170587,170663..170750,170828..170940,171020..>171274)	Acanthamoeba castellanii str. Neff	14921216
ACA1_186210	mRNA	ACA1_186210	NW_004457568.1	172439	173628	D	ACA1_186210	join(<172439..172649,172761..172909,173014..173182,173312..173443,173528..>173628)	Acanthamoeba castellanii str. Neff	14921217
ACA1_186220	mRNA	ACA1_186220	NW_004457568.1	174800	175472	R	ACA1_186220	complement(join(<174800..175381,175449..>175472))	Acanthamoeba castellanii str. Neff	14921218
ACA1_186330	mRNA	ACA1_186330	NW_004457568.1	175660	176184	D	ACA1_186330	<175660..>176184	Acanthamoeba castellanii str. Neff	14921219
ACA1_186340	mRNA	ACA1_186340	NW_004457568.1	176616	179025	R	ACA1_186340	complement(join(<176616..176651,176889..176982,177072..177142,177253..177379,177470..178278,178431..178475,178571..178650,178728..>179025))	Acanthamoeba castellanii str. Neff	14921220
ACA1_186350	mRNA	ACA1_186350	NW_004457568.1	179212	181266	R	ACA1_186350	complement(join(<179212..179391,179471..179566,179647..179754,179844..180047,180405..180605,180622..180774,180786..180995,181063..181089,181177..>181266))	Acanthamoeba castellanii str. Neff	14921221
ACA1_186670	mRNA	ACA1_186670	NW_004457568.1	182701	185713	R	ACA1_186670	complement(join(<182701..182745,182790..182993,183097..183204,183309..183355,183455..183688,183743..184381,184446..184549,184661..184822,184839..>185713))	Acanthamoeba castellanii str. Neff	14921223
ACA1_186680	mRNA	ACA1_186680	NW_004457568.1	186001	187350	D	ACA1_186680	join(<186001..186181,186306..186389,186489..186623,186777..186916,187005..187142,187249..>187350)	Acanthamoeba castellanii str. Neff	14921224
ACA1_186700	mRNA	ACA1_186700	NW_004457568.1	193687	198009	D	ACA1_186700	join(<193687..194110,194241..194360,194463..194534,194604..194675,194764..194847,194926..195027,195104..195152,195227..195265,195488..195566,195664..195723,195816..195975,196056..196130,196212..196277,196385..196456,196520..196605,196706..196742,196822..196896,196987..197063,197136..197200,197261..197306,197393..197483,197603..197695,197771..197854,197921..>198009)	Acanthamoeba castellanii str. Neff	14921226
ACA1_186720	mRNA	ACA1_186720	NW_004457568.1	200286	202155	D	ACA1_186720	join(<200286..200390,200741..200841,200937..201055,201147..201603,201673..201787,201858..201984,202091..>202155)	Acanthamoeba castellanii str. Neff	14921228
ACA1_186730	mRNA	ACA1_186730	NW_004457568.1	202260	207611	D	ACA1_186730	join(<202260..202468,202562..202659,202756..202866,202962..203083,203189..203315,203426..203532,203650..203706,203782..203856,203920..203965,204062..204134,204243..204432,204533..204704,204946..205072,205149..205269,205374..205502,205583..205718,205797..205984,206015..206089,206183..206254,206368..206476,206546..206670,206787..206858,206923..207008,207088..207214,207287..207460,207558..>207611)	Acanthamoeba castellanii str. Neff	14921229
ACA1_186740	mRNA	ACA1_186740	NW_004457568.1	208020	209636	D	ACA1_186740	join(<208020..208557,208777..>209636)	Acanthamoeba castellanii str. Neff	14921230
ACA1_186750	mRNA	ACA1_186750	NW_004457568.1	210202	211380	D	ACA1_186750	join(<210202..210258,210922..>211380)	Acanthamoeba castellanii str. Neff	14921231
ACA1_186860	mRNA	ACA1_186860	NW_004457568.1	211644	212657	D	ACA1_186860	join(<211644..211700,211800..211879,211968..212064,212254..212322,212421..>212657)	Acanthamoeba castellanii str. Neff	14921232
ACA1_186870	mRNA	ACA1_186870	NW_004457568.1	213998	216468	D	ACA1_186870	join(<213998..214086,214143..214224,214307..214400,214498..214665,214802..214976,215074..215397,215481..>216468)	Acanthamoeba castellanii str. Neff	14921233
ACA1_186880	mRNA	ACA1_186880	NW_004457568.1	216618	218660	D	ACA1_186880	join(<216618..217814,217937..218074,218185..218215,218272..>218660)	Acanthamoeba castellanii str. Neff	14921234
ACA1_186890	mRNA	ACA1_186890	NW_004457568.1	218795	219025	D	ACA1_186890	join(<218795..218973,219010..>219025)	Acanthamoeba castellanii str. Neff	14921235
ACA1_186900	mRNA	ACA1_186900	NW_004457568.1	219084	220669	R	ACA1_186900	complement(join(<219084..219202,219281..219364,219486..219661,219772..219860,219974..220157,220231..220450,220585..>220669))	Acanthamoeba castellanii str. Neff	14921236
ACA1_186910	mRNA	ACA1_186910	NW_004457568.1	221013	227422	D	ACA1_186910	join(<221013..221192,221264..221370,221442..221641,221736..222754,222824..223054,223142..223289,223359..223633,223730..223855,226964..>227422)	Acanthamoeba castellanii str. Neff	14921237
ACA1_187020	mRNA	ACA1_187020	NW_004457568.1	227611	228087	R	ACA1_187020	complement(<227611..>228087)	Acanthamoeba castellanii str. Neff	14921238
ACA1_027490	mRNA	ACA1_027490	NW_004457567.1	72	4227	R	ACA1_027490	complement(join(<72..92,306..370,452..722,808..1095,1167..1472,1541..1774,1867..2340,2429..2634,2751..2834,2918..3010,3114..3246,3322..3410,3509..3593,3653..3813,3888..>4227))	Acanthamoeba castellanii str. Neff	14921155
ACA1_027500	mRNA	ACA1_027500	NW_004457567.1	4785	7169	R	ACA1_027500	complement(join(<4785..4916,4987..5199,5268..5358,5455..5711,5792..5956,6036..6133,6227..6377,6504..6658,6735..6883,6957..6976,7077..>7169))	Acanthamoeba castellanii str. Neff	14921156
ACA1_027610	mRNA	ACA1_027610	NW_004457567.1	10763	11302	D	ACA1_027610	join(<10763..10819,10932..11042,11117..>11302)	Acanthamoeba castellanii str. Neff	14921152
ACA1_027620	mRNA	ACA1_027620	NW_004457567.1	11614	12863	R	ACA1_027620	complement(join(<11614..11661,11727..12179,12254..12380,12529..12661,12731..12747,12838..>12863))	Acanthamoeba castellanii str. Neff	14921153
ACA1_027630	mRNA	ACA1_027630	NW_004457567.1	13380	13733	D	ACA1_027630	join(<13380..13538,13611..>13733)	Acanthamoeba castellanii str. Neff	14921154
ACA1_029840	mRNA	ACA1_029840	NW_004457565.1	2062	4746	R	ACA1_029840	complement(join(<2062..2087,2098..2235,2386..2708,3019..3101,3200..3493,4150..4614,4741..>4746))	Acanthamoeba castellanii str. Neff	14921151
ACA1_030050	mRNA	ACA1_030050	NW_004457565.1	4932	5123	D	ACA1_030050	<4932..>5123	Acanthamoeba castellanii str. Neff	14921143
ACA1_030060	mRNA	ACA1_030060	NW_004457565.1	5160	7240	R	ACA1_030060	complement(join(<5160..5201,5354..5807,5887..6052,6251..6478,6573..6735,6820..7222,7236..>7240))	Acanthamoeba castellanii str. Neff	14921144
ACA1_030070	mRNA	ACA1_030070	NW_004457565.1	7825	9052	D	ACA1_030070	join(<7825..7869,8029..8112,8204..8333,8456..8649,8783..>9052)	Acanthamoeba castellanii str. Neff	14921145
ACA1_030080	mRNA	ACA1_030080	NW_004457565.1	9118	13382	R	ACA1_030080	complement(join(<9118..10258,10357..10592,10698..11023,11091..11155,11248..>13382))	Acanthamoeba castellanii str. Neff	14921146
ACA1_030200	mRNA	ACA1_030200	NW_004457565.1	27013	28241	R	ACA1_030200	complement(join(<27013..27737,27809..27911,28011..>28241))	Acanthamoeba castellanii str. Neff	14921148
ACA1_030210	mRNA	ACA1_030210	NW_004457565.1	29452	30059	D	ACA1_030210	join(<29452..29507,29618..>30059)	Acanthamoeba castellanii str. Neff	14921149
ACA1_030220	mRNA	ACA1_030220	NW_004457565.1	30077	34936	D	ACA1_030220	join(<30077..30248,30321..30548,30718..30883,30963..31416,31573..31857,32011..32224,32369..32605,32708..32884,33022..33651,33757..34406,34496..34812,34896..>34936)	Acanthamoeba castellanii str. Neff	14921150
ACA1_307240	mRNA	ACA1_307240	NW_004457563.1	20	1085	R	ACA1_307240	complement(join(<20..360,488..738,856..>1085))	Acanthamoeba castellanii str. Neff	14921141
ACA1_307250	mRNA	ACA1_307250	NW_004457563.1	1342	2009	R	ACA1_307250	complement(join(<1342..1413,1549..1618,1735..1829,1944..>2009))	Acanthamoeba castellanii str. Neff	14921142
ACA1_307260	mRNA	ACA1_307260	NW_004457563.1	2480	9654	D	ACA1_307260	join(<2480..2508,2808..3094,3794..3807,3879..3957,4042..4221,4329..4400,4524..4642,4735..4845,4972..5198,5312..5357,5502..5606,5725..5870,5958..6071,6171..6250,6328..6373,6474..6560,6665..6728,8291..8323,8431..8505,8623..8680,8790..8901,9007..9084,9157..9298,9433..>9654)	Acanthamoeba castellanii str. Neff	14921128
ACA1_307470	mRNA	ACA1_307470	NW_004457563.1	9803	11028	R	ACA1_307470	complement(join(<9803..9871,9964..10045,10167..10250,10366..10420,10567..10623,10710..>11028))	Acanthamoeba castellanii str. Neff	14921129
ACA1_307480	mRNA	ACA1_307480	NW_004457563.1	11551	14176	R	ACA1_307480	complement(join(<11551..11923,11992..12406,12477..12540,12649..12693,12792..12938,13039..13153,13218..13401,13484..13598,13703..13798,13871..13948,14123..>14176))	Acanthamoeba castellanii str. Neff	14921130
ACA1_307490	mRNA	ACA1_307490	NW_004457563.1	14990	17899	R	ACA1_307490	complement(join(<14990..15094,15156..15239,15310..15413,15524..15693,15755..15813,15918..16035,16138..16238,16363..16470,16678..16802,16894..17008,17108..17382,17520..17637,17780..>17899))	Acanthamoeba castellanii str. Neff	14921131
ACA1_307500	mRNA	ACA1_307500	NW_004457563.1	18225	21218	D	ACA1_307500	join(<18225..18327,18485..18525,18638..18767,18890..19146,19266..19343,19503..19610,19723..19893,20025..20143,20283..20382,20500..20643,20718..20859,20968..21053,21153..>21218)	Acanthamoeba castellanii str. Neff	14921132
ACA1_307510	mRNA	ACA1_307510	NW_004457563.1	21284	23108	R	ACA1_307510	complement(join(<21284..21462,21536..21548,21588..21664,21742..21865,21953..22031,22123..22175,22273..22393,22499..22656,22736..22849,22947..>23108))	Acanthamoeba castellanii str. Neff	14921133
ACA1_307520	mRNA	ACA1_307520	NW_004457563.1	23477	26597	R	ACA1_307520	complement(join(<23477..24058,24162..24434,24515..24644,24722..24963,25075..25225,25327..25442,25597..25714,25874..25965,26034..26089,26543..>26597))	Acanthamoeba castellanii str. Neff	14921134
ACA1_307530	mRNA	ACA1_307530	NW_004457563.1	26733	28875	D	ACA1_307530	join(<26733..26984,27135..27205,27297..27363,27447..27569,27661..27713,27802..27872,27970..28060,28179..28280,28402..28579,28708..>28875)	Acanthamoeba castellanii str. Neff	14921135
ACA1_307540	mRNA	ACA1_307540	NW_004457563.1	29451	32134	D	ACA1_307540	join(<29451..29680,29747..29768,29873..29976,30065..30248,30386..30475,30584..30786,30916..31009,31099..31224,31319..31480,31573..31812,31940..>32134)	Acanthamoeba castellanii str. Neff	14921136
ACA1_307550	mRNA	ACA1_307550	NW_004457563.1	32833	36229	D	ACA1_307550	join(<32833..33039,33119..33230,33300..33534,33822..34218,34345..34485,34602..34751,34875..34988,35133..35165,35208..35275,35393..35715,35925..>36229)	Acanthamoeba castellanii str. Neff	14921137
ACA1_307560	mRNA	ACA1_307560	NW_004457563.1	36446	38787	R	ACA1_307560	complement(join(<36446..36501,36589..36743,36851..36959,37041..37191,37384..37455,37683..37747,37959..38070,38178..38265,38426..38484,38551..>38787))	Acanthamoeba castellanii str. Neff	14921138
ACA1_307570	mRNA	ACA1_307570	NW_004457563.1	39206	40935	R	ACA1_307570	complement(join(<39206..39372,39477..39528,39614..39724,39803..40030,40156..>40935))	Acanthamoeba castellanii str. Neff	14921139
ACA1_307580	mRNA	ACA1_307580	NW_004457563.1	41841	42951	R	ACA1_307580	complement(join(<41841..42640,42739..42882,42945..>42951))	Acanthamoeba castellanii str. Neff	14921140
ACA1_320080	mRNA	ACA1_320080	NW_004457561.1	162	1093	D	ACA1_320080	join(<162..437,493..1051,1071..>1093)	Acanthamoeba castellanii str. Neff	14921124
ACA1_320090	mRNA	ACA1_320090	NW_004457561.1	1310	2203	D	ACA1_320090	join(<1310..1381,1450..1511,1600..1706,1821..1939,2039..>2203)	Acanthamoeba castellanii str. Neff	14921127
ACA1_320100	mRNA	ACA1_320100	NW_004457561.1	3524	8324	D	ACA1_320100	join(<3524..3710,6768..6987,7050..7150,7239..7362,7453..7523,7634..7770,7983..>8324)	Acanthamoeba castellanii str. Neff	14921125
ACA1_320310	mRNA	ACA1_320310	NW_004457561.1	8987	9307	D	ACA1_320310	join(<8987..9013,9116..>9307)	Acanthamoeba castellanii str. Neff	14921126
ACA1_320420	mRNA	ACA1_320420	NW_004457561.1	14489	16900	R	ACA1_320420	complement(join(<14489..14630,14733..14805,14932..15065,15126..15237,15325..15415,15427..15504,15545..15726,15834..15910,15980..16112,16199..16570,16735..>16900))	Acanthamoeba castellanii str. Neff	14921123
ACA1_012630	mRNA	ACA1_012630	NW_004457559.1	3228	3677	D	ACA1_012630	join(<3228..3383,3547..3635,3653..>3677)	Acanthamoeba castellanii str. Neff	14921111
ACA1_012740	mRNA	ACA1_012740	NW_004457559.1	4599	5929	D	ACA1_012740	join(<4599..4711,4824..4907,4982..5175,5537..5627,5705..5782,5833..>5929)	Acanthamoeba castellanii str. Neff	14921113
ACA1_012850	mRNA	ACA1_012850	NW_004457559.1	6490	6946	D	ACA1_012850	join(<6490..6628,6702..>6946)	Acanthamoeba castellanii str. Neff	14921114
ACA1_012960	mRNA	ACA1_012960	NW_004457559.1	12396	12876	R	ACA1_012960	complement(join(<12396..12499,12580..12686,12758..>12876))	Acanthamoeba castellanii str. Neff	14921115
ACA1_012970	mRNA	ACA1_012970	NW_004457559.1	13090	14810	D	ACA1_012970	join(<13090..13170,13238..13330,13406..13466,13573..13707,13797..13880,13975..14123,14194..14253,14317..14388,14469..14555,14637..>14810)	Acanthamoeba castellanii str. Neff	14921116
ACA1_012980	mRNA	ACA1_012980	NW_004457559.1	14923	16736	R	ACA1_012980	complement(join(<14923..15172,15249..15384,15476..15602,15667..15968,16053..16382,16463..16510,16532..>16736))	Acanthamoeba castellanii str. Neff	14921117
ACA1_012990	mRNA	ACA1_012990	NW_004457559.1	17332	20574	D	ACA1_012990	join(<17332..17413,17487..17523,17583..17653,17912..17999,18073..18178,18242..18328,18498..18605,18672..18813,18920..19015,19073..19153,19234..19391,19464..19633,19740..20004,20066..20162,20272..20436,20501..>20574)	Acanthamoeba castellanii str. Neff	14921120
ACA1_013000	mRNA	ACA1_013000	NW_004457559.1	20739	21234	R	ACA1_013000	complement(join(<20739..21124,21186..>21234))	Acanthamoeba castellanii str. Neff	14921122
ACA1_013010	mRNA	ACA1_013010	NW_004457559.1	21513	21908	D	ACA1_013010	join(<21513..21630,21682..>21908)	Acanthamoeba castellanii str. Neff	14921121
ACA1_013120	mRNA	ACA1_013120	NW_004457559.1	24373	25151	D	ACA1_013120	join(<24373..24391,24529..24600,24707..24788,24902..25013,25116..>25151)	Acanthamoeba castellanii str. Neff	14921118
ACA1_013230	mRNA	ACA1_013230	NW_004457559.1	28547	28820	R	ACA1_013230	complement(join(<28547..28556,28573..>28820))	Acanthamoeba castellanii str. Neff	14921112
ACA1_013240	mRNA	ACA1_013240	NW_004457559.1	29357	30549	D	ACA1_013240	join(<29357..29670,29759..29918,29988..30139,30220..30365,30458..>30549)	Acanthamoeba castellanii str. Neff	14921119
ACA1_111200	mRNA	ACA1_111200	NW_004457554.1	92	1669	D	ACA1_111200	join(<92..731,794..853,920..941,1276..>1669)	Acanthamoeba castellanii str. Neff	14921110
ACA1_111310	mRNA	ACA1_111310	NW_004457554.1	1842	3361	D	ACA1_111310	join(<1842..2486,2562..2756,2852..>3361)	Acanthamoeba castellanii str. Neff	14920748
ACA1_111320	mRNA	ACA1_111320	NW_004457554.1	3419	3822	R	ACA1_111320	complement(join(<3419..3761,3803..>3822))	Acanthamoeba castellanii str. Neff	14920747
ACA1_111430	mRNA	ACA1_111430	NW_004457554.1	5510	6312	D	ACA1_111430	join(<5510..5621,5749..5871,5934..5993,6060..6119,6178..6237,6269..>6312)	Acanthamoeba castellanii str. Neff	14920735
ACA1_111550	mRNA	ACA1_111550	NW_004457554.1	15241	18247	R	ACA1_111550	complement(join(<15241..15364,15450..15550,15642..15756,15855..15984,16117..16161,16254..16423,16542..16614,16690..16771,16849..16972,17062..17153,17266..17343,17425..17523,17645..17700,17811..17909,18121..>18247))	Acanthamoeba castellanii str. Neff	14920737
ACA1_111560	mRNA	ACA1_111560	NW_004457554.1	18402	20552	R	ACA1_111560	complement(join(<18402..18587,18726..18763,18839..18910,19010..19190,19423..19557,19641..19829,19921..20091,20222..20302,20391..>20552))	Acanthamoeba castellanii str. Neff	14920738
ACA1_111670	mRNA	ACA1_111670	NW_004457554.1	26266	27030	R	ACA1_111670	complement(join(<26266..26345,26435..26605,26715..26795,26884..>27030))	Acanthamoeba castellanii str. Neff	14920739
ACA1_111680	mRNA	ACA1_111680	NW_004457554.1	28124	31839	D	ACA1_111680	join(<28124..28514,28685..28840,28868..28999,29081..29237,29350..29518,29607..29846,29949..30056,30162..30293,30413..30535,30619..30741,30814..30911,31040..31403,31492..31654,31739..>31839)	Acanthamoeba castellanii str. Neff	14920740
ACA1_111690	mRNA	ACA1_111690	NW_004457554.1	32056	34550	R	ACA1_111690	complement(join(<32056..32485,32691..32779,32931..33027,33137..33867,33924..34112,34260..34386,34480..>34550))	Acanthamoeba castellanii str. Neff	14920741
ACA1_111700	mRNA	ACA1_111700	NW_004457554.1	34612	35555	D	ACA1_111700	join(<34612..35257,35347..>35555)	Acanthamoeba castellanii str. Neff	14920742
ACA1_111720	mRNA	ACA1_111720	NW_004457554.1	38228	39631	D	ACA1_111720	join(<38228..38299,38366..38480,38582..38652,38751..39007,39095..39266,39343..39445,39522..>39631)	Acanthamoeba castellanii str. Neff	14920744
ACA1_111730	mRNA	ACA1_111730	NW_004457554.1	39732	40326	R	ACA1_111730	complement(join(<39732..40108,40293..>40326))	Acanthamoeba castellanii str. Neff	14920745
ACA1_111740	mRNA	ACA1_111740	NW_004457554.1	40730	41661	D	ACA1_111740	join(<40730..40777,40898..40951,41029..41082,41162..41380,41461..>41661)	Acanthamoeba castellanii str. Neff	14920746
ACA1_111750	mRNA	ACA1_111750	NW_004457554.1	41645	42614	R	ACA1_111750	complement(join(<41645..41966,42031..42184,42267..42389,42500..>42614))	Acanthamoeba castellanii str. Neff	14920749
ACA1_111860	mRNA	ACA1_111860	NW_004457554.1	43413	49341	R	ACA1_111860	complement(join(<43413..43458,43569..43699,43833..43944,44143..44182,44295..44388,44494..44667,44785..44977,45073..45151,45249..45309,45538..45664,45739..45848,45980..46063,46144..46278,46370..46486,46610..46728,46833..46907,47079..47207,47251..47371,47492..47737,47834..48121,48316..48432,48586..48751,48868..49012,49123..49210,49285..>49341))	Acanthamoeba castellanii str. Neff	14920750
ACA1_111870	mRNA	ACA1_111870	NW_004457554.1	49494	57377	R	ACA1_111870	complement(join(<49494..49621,49726..49880,49967..50339,50420..50490,50581..50861,50925..50964,51097..51212,51306..51401,51498..51609,51703..52142,52160..52204,52238..52386,52467..52572,52663..52875,52986..53314,53452..53652,53741..53843,53917..54135,54214..54330,54429..54890,54964..55277,55357..55535,55638..55688,55710..55824,55922..56131,56148..56199,56225..56731,56800..56934,57171..57265,57338..>57377))	Acanthamoeba castellanii str. Neff	14920751
ACA1_111880	mRNA	ACA1_111880	NW_004457554.1	57696	59147	D	ACA1_111880	join(<57696..57764,57923..58711,58821..58979,59061..>59147)	Acanthamoeba castellanii str. Neff	14920752
ACA1_111890	mRNA	ACA1_111890	NW_004457554.1	59353	60582	D	ACA1_111890	join(<59353..59413,59520..59685,59760..59833,59921..60144,60227..60284,60458..>60582)	Acanthamoeba castellanii str. Neff	14920753
ACA1_111900	mRNA	ACA1_111900	NW_004457554.1	60607	65031	D	ACA1_111900	join(<60607..60687,60793..61113,61189..61335,61408..61614,61669..61857,61941..62105,62185..63148,63255..63493,63577..63741,63851..63994,64026..64138,64294..64489,64600..>65031)	Acanthamoeba castellanii str. Neff	14920754
ACA1_111910	mRNA	ACA1_111910	NW_004457554.1	65268	65746	D	ACA1_111910	join(<65268..65505,65580..>65746)	Acanthamoeba castellanii str. Neff	14920755
ACA1_111920	mRNA	ACA1_111920	NW_004457554.1	66136	67126	D	ACA1_111920	join(<66136..66697,66823..66994,67081..>67126)	Acanthamoeba castellanii str. Neff	14920756
ACA1_111930	mRNA	ACA1_111930	NW_004457554.1	67641	68266	D	ACA1_111930	join(<67641..67724,67837..67993,68139..>68266)	Acanthamoeba castellanii str. Neff	14920757
ACA1_111940	mRNA	ACA1_111940	NW_004457554.1	68497	68913	R	ACA1_111940	complement(<68497..>68913)	Acanthamoeba castellanii str. Neff	14920758
ACA1_111950	mRNA	ACA1_111950	NW_004457554.1	69505	73256	D	ACA1_111950	join(<69505..69586,69873..70017,70132..70342,70424..70550,70663..70853,70963..71061,71169..71407,71480..71731,71798..72012,72123..72566,72656..72772,72850..73073,73149..>73256)	Acanthamoeba castellanii str. Neff	14920759
ACA1_111960	mRNA	ACA1_111960	NW_004457554.1	73389	75722	R	ACA1_111960	complement(join(<73389..73541,73645..73770,73851..73906,74088..74198,74297..74414,74530..74591,74683..74776,74885..74970,75146..75245,75573..>75722))	Acanthamoeba castellanii str. Neff	14920760
ACA1_111970	mRNA	ACA1_111970	NW_004457554.1	76229	76630	D	ACA1_111970	<76229..>76630	Acanthamoeba castellanii str. Neff	14920761
ACA1_111980	mRNA	ACA1_111980	NW_004457554.1	76791	77700	D	ACA1_111980	join(<76791..76823,76865..76938,76955..77001,77130..77484,77565..>77700)	Acanthamoeba castellanii str. Neff	14920762
ACA1_111990	mRNA	ACA1_111990	NW_004457554.1	78170	79787	D	ACA1_111990	join(<78170..78656,78781..78900,79047..79121,79226..79285,79381..>79787)	Acanthamoeba castellanii str. Neff	14920763
ACA1_112000	mRNA	ACA1_112000	NW_004457554.1	80150	81978	D	ACA1_112000	join(<80150..80223,80342..80448,80543..80725,80859..80996,81078..81257,81390..81508,81600..81647,81742..>81978)	Acanthamoeba castellanii str. Neff	14920764
ACA1_112010	mRNA	ACA1_112010	NW_004457554.1	82488	83633	R	ACA1_112010	complement(join(<82488..82608,82707..82878,82994..83131,83359..83458,83469..>83633))	Acanthamoeba castellanii str. Neff	14920765
ACA1_112020	mRNA	ACA1_112020	NW_004457554.1	83824	87497	R	ACA1_112020	complement(join(<83824..83846,83933..84008,84088..84435,84540..84661,84731..84911,85165..85446,85562..85773,85853..87352,87434..>87497))	Acanthamoeba castellanii str. Neff	14920766
ACA1_112030	mRNA	ACA1_112030	NW_004457554.1	88011	89521	R	ACA1_112030	complement(join(<88011..88075,88190..88325,88412..88473,88575..88655,88785..88904,89064..89103,89187..89324,89510..>89521))	Acanthamoeba castellanii str. Neff	14920767
ACA1_112040	mRNA	ACA1_112040	NW_004457554.1	89859	95058	D	ACA1_112040	join(<89859..89950,90058..90128,90165..90281,90595..91019,91093..91426,91546..91655,91791..91860,92015..92065,92191..92379,92538..92753,92890..92948,93059..93140,93240..93340,93466..93553,93729..93950,93974..>95058)	Acanthamoeba castellanii str. Neff	14920768
ACA1_112050	mRNA	ACA1_112050	NW_004457554.1	95265	97132	D	ACA1_112050	join(<95265..96008,96179..96493,96618..96939,97038..>97132)	Acanthamoeba castellanii str. Neff	14920769
ACA1_112060	mRNA	ACA1_112060	NW_004457554.1	97445	98586	D	ACA1_112060	join(<97445..97505,97607..97723,97784..97853,97931..97975,98146..98335,98446..>98586)	Acanthamoeba castellanii str. Neff	14920770
ACA1_112070	mRNA	ACA1_112070	NW_004457554.1	98738	99717	R	ACA1_112070	complement(join(<98738..98942,98966..>99717))	Acanthamoeba castellanii str. Neff	14920771
ACA1_112080	mRNA	ACA1_112080	NW_004457554.1	100683	104401	D	ACA1_112080	join(<100683..101717,102432..103330,103435..103569,103678..>104401)	Acanthamoeba castellanii str. Neff	14920772
ACA1_112090	mRNA	ACA1_112090	NW_004457554.1	104798	107246	D	ACA1_112090	join(<104798..105019,105136..105281,105351..105435,105504..105654,105732..105795,105863..106310,106331..106496,106592..106753,106788..107203,107220..>107246)	Acanthamoeba castellanii str. Neff	14920773
ACA1_112100	mRNA	ACA1_112100	NW_004457554.1	108068	112292	D	ACA1_112100	join(<108068..108437,108546..108593,108665..108733,108870..109016,109110..109259,109346..109495,109637..109738,109900..110018,110142..110220,110323..110452,110564..110959,111090..111424,111519..111695,111777..111897,111959..112034,112080..>112292)	Acanthamoeba castellanii str. Neff	14920774
ACA1_112110	mRNA	ACA1_112110	NW_004457554.1	112382	116179	D	ACA1_112110	join(<112382..112593,112695..113037,113171..113257,113347..113414,113529..113646,113753..113863,113935..114026,114138..114235,114361..114477,114617..114865,114934..115025,115119..115285,115414..115511,115649..115735,115838..115968,116024..>116179)	Acanthamoeba castellanii str. Neff	14920775
ACA1_112120	mRNA	ACA1_112120	NW_004457554.1	116968	117355	R	ACA1_112120	complement(join(<116968..117068,117214..>117355))	Acanthamoeba castellanii str. Neff	14920776
ACA1_112130	mRNA	ACA1_112130	NW_004457554.1	117600	121862	D	ACA1_112130	join(<117600..117613,117631..118538,118646..119123,119211..119366,119492..119579,119720..119793,119910..120007,120155..120320,120453..120679,120790..120931,121062..121140,121232..121357,121470..>121862)	Acanthamoeba castellanii str. Neff	14920777
ACA1_112140	mRNA	ACA1_112140	NW_004457554.1	121927	123663	R	ACA1_112140	complement(join(<121927..121973,122066..122185,122280..122436,122592..122726,122849..122947,123047..123206,123323..>123663))	Acanthamoeba castellanii str. Neff	14920778
ACA1_112150	mRNA	ACA1_112150	NW_004457554.1	123798	129240	R	ACA1_112150	complement(join(<123798..123963,124087..124158,124293..124531,124630..124788,124919..125062,125182..125259,125379..125589,125731..125812,125960..126121,126202..126697,126766..126931,127028..127098,127198..127373,127575..127665,127776..127856,127978..128049,128134..128226,128321..128390,128408..128451,128629..128789,128902..128947,129085..>129240))	Acanthamoeba castellanii str. Neff	14920779
ACA1_112160	mRNA	ACA1_112160	NW_004457554.1	130027	133057	D	ACA1_112160	join(<130027..130274,130362..130450,130541..130612,130722..130780,130874..130925,131103..131244,131312..131470,131589..131679,131795..131917,132049..132356,132462..132604,132840..>133057)	Acanthamoeba castellanii str. Neff	14920780
ACA1_112170	mRNA	ACA1_112170	NW_004457554.1	134113	136736	D	ACA1_112170	join(<134113..135162,135250..135342,135450..135547,135638..135762,135837..135964,136072..136236,136340..136471,136560..>136736)	Acanthamoeba castellanii str. Neff	14920781
ACA1_112180	mRNA	ACA1_112180	NW_004457554.1	137200	140275	D	ACA1_112180	join(<137200..137670,137771..137877,138008..138130,138263..138362,138475..138535,138612..138695,138799..138965,139089..139281,139384..139537,139665..139758,139878..140039,140192..>140275)	Acanthamoeba castellanii str. Neff	14920782
ACA1_112190	mRNA	ACA1_112190	NW_004457554.1	140418	141554	R	ACA1_112190	complement(<140418..>141554)	Acanthamoeba castellanii str. Neff	14920783
ACA1_112200	mRNA	ACA1_112200	NW_004457554.1	141991	145640	R	ACA1_112200	complement(join(<141991..142162,142252..142455,142566..143248,143325..143420,143530..143735,143820..144110,144199..144568,144810..144923,145164..>145640))	Acanthamoeba castellanii str. Neff	14920784
ACA1_112210	mRNA	ACA1_112210	NW_004457554.1	146646	148861	D	ACA1_112210	join(<146646..146768,146919..146988,147161..147309,147402..147510,147614..147733,147862..148032,148301..148374,148489..148668,148799..>148861)	Acanthamoeba castellanii str. Neff	14920785
ACA1_112320	mRNA	ACA1_112320	NW_004457554.1	150455	151459	R	ACA1_112320	complement(join(<150455..150606,150708..150957,151084..151244,151318..>151459))	Acanthamoeba castellanii str. Neff	14920786
ACA1_112430	mRNA	ACA1_112430	NW_004457554.1	151709	153675	D	ACA1_112430	join(<151709..151817,151923..152042,152161..152331,152438..152622,152761..152834,152956..153135,153264..153354,153430..>153675)	Acanthamoeba castellanii str. Neff	14920787
ACA1_112450	mRNA	ACA1_112450	NW_004457554.1	155315	157724	R	ACA1_112450	complement(join(<155315..155466,155680..155929,156055..156215,156295..156454,156558..156655,156757..156939,157021..157185,157276..157330,157391..157576,157677..>157724))	Acanthamoeba castellanii str. Neff	14920789
ACA1_112460	mRNA	ACA1_112460	NW_004457554.1	158034	158615	R	ACA1_112460	complement(join(<158034..158119,158180..158341,158405..>158615))	Acanthamoeba castellanii str. Neff	14920790
ACA1_112470	mRNA	ACA1_112470	NW_004457554.1	159013	160736	R	ACA1_112470	complement(join(<159013..159264,159326..159387,159470..159585,159701..159857,159978..160083,160155..160222,160301..>160736))	Acanthamoeba castellanii str. Neff	14920791
ACA1_112480	mRNA	ACA1_112480	NW_004457554.1	160921	161505	D	ACA1_112480	<160921..>161505	Acanthamoeba castellanii str. Neff	14920792
ACA1_112490	mRNA	ACA1_112490	NW_004457554.1	162067	162423	D	ACA1_112490	join(<162067..162183,162280..>162423)	Acanthamoeba castellanii str. Neff	14920793
ACA1_112500	mRNA	ACA1_112500	NW_004457554.1	163219	170380	D	ACA1_112500	join(<163219..165987,166117..166228,166332..167717,167859..167956,168050..168325,168471..168722,168794..168901,169118..169207,169327..169410,169547..169645,169783..169906,169989..>170380)	Acanthamoeba castellanii str. Neff	14920794
ACA1_112510	mRNA	ACA1_112510	NW_004457554.1	171035	173533	R	ACA1_112510	complement(join(<171035..171402,171505..171673,171807..171927,172183..172303,172433..172498,172639..>173533))	Acanthamoeba castellanii str. Neff	14920795
ACA1_112520	mRNA	ACA1_112520	NW_004457554.1	174190	174666	D	ACA1_112520	join(<174190..174354,174448..>174666)	Acanthamoeba castellanii str. Neff	14920796
ACA1_112530	mRNA	ACA1_112530	NW_004457554.1	175053	179002	D	ACA1_112530	join(<175053..175132,175373..176300,176419..176974,177080..177136,177240..177393,177479..177689,177761..178003,178131..178259,178351..178493,178586..178763,178853..>179002)	Acanthamoeba castellanii str. Neff	14920797
ACA1_112540	mRNA	ACA1_112540	NW_004457554.1	179113	180778	R	ACA1_112540	complement(join(<179113..179273,179381..179537,179660..179767,179897..180273,180466..>180778))	Acanthamoeba castellanii str. Neff	14920798
ACA1_112550	mRNA	ACA1_112550	NW_004457554.1	181435	182718	R	ACA1_112550	complement(join(<181435..181560,181672..181779,181891..182126,182267..182282,182377..182427,182513..182604,182706..>182718))	Acanthamoeba castellanii str. Neff	14920799
ACA1_112560	mRNA	ACA1_112560	NW_004457554.1	182990	185386	D	ACA1_112560	join(<182990..183467,183547..183740,183857..183906,184031..184209,184282..184428,184514..184611,184706..184846,184952..185051,185151..>185386)	Acanthamoeba castellanii str. Neff	14920800
ACA1_112570	mRNA	ACA1_112570	NW_004457554.1	185491	190212	R	ACA1_112570	complement(join(<185491..185626,185837..185969,186075..186260,186353..186598,186683..186790,186933..187021,187118..187225,187354..187422,187600..188012,188079..188170,188222..188360,188481..188563,188648..189144,189327..189457,189603..189670,189804..>190212))	Acanthamoeba castellanii str. Neff	14920801
ACA1_112580	mRNA	ACA1_112580	NW_004457554.1	190547	193008	D	ACA1_112580	join(<190547..190550,190681..190986,190999..191736,191829..191867,191980..192125,192216..192320,192435..192526,192618..192732,192838..>193008)	Acanthamoeba castellanii str. Neff	14920802
ACA1_112590	mRNA	ACA1_112590	NW_004457554.1	193242	195737	D	ACA1_112590	join(<193242..194147,194264..194738,194854..194944,195000..195151,195217..195528,195607..>195737)	Acanthamoeba castellanii str. Neff	14920803
ACA1_112600	mRNA	ACA1_112600	NW_004457554.1	195837	196121	R	ACA1_112600	complement(join(<195837..195925,195992..>196121))	Acanthamoeba castellanii str. Neff	14920804
ACA1_112610	mRNA	ACA1_112610	NW_004457554.1	196282	199008	R	ACA1_112610	complement(join(<196282..196431,196504..196585,196682..196980,197100..197196,197296..197367,197459..197562,197698..197853,197924..198097,198220..198321,198443..198587,198697..198856,198936..>199008))	Acanthamoeba castellanii str. Neff	14920805
ACA1_112620	mRNA	ACA1_112620	NW_004457554.1	199222	200795	D	ACA1_112620	join(<199222..199686,199786..200481,200571..>200795)	Acanthamoeba castellanii str. Neff	14920806
ACA1_112640	mRNA	ACA1_112640	NW_004457554.1	202708	205405	D	ACA1_112640	join(<202708..202863,202989..203111,203197..203353,203494..203838,203937..203989,204133..204258,204409..204458,204531..204614,204808..204864,204949..205045,205107..205170,205260..>205405)	Acanthamoeba castellanii str. Neff	14920808
ACA1_112650	mRNA	ACA1_112650	NW_004457554.1	205483	206677	R	ACA1_112650	complement(join(<205483..205677,205774..206040,206120..206186,206292..206403,206506..>206677))	Acanthamoeba castellanii str. Neff	14920809
ACA1_112660	mRNA	ACA1_112660	NW_004457554.1	207166	211664	D	ACA1_112660	join(<207166..208469,208557..210662,210738..211081,211202..211296,211533..>211664)	Acanthamoeba castellanii str. Neff	14920810
ACA1_112670	mRNA	ACA1_112670	NW_004457554.1	212082	212448	R	ACA1_112670	complement(join(<212082..212291,212398..>212448))	Acanthamoeba castellanii str. Neff	14920811
ACA1_112780	mRNA	ACA1_112780	NW_004457554.1	212989	213499	D	ACA1_112780	join(<212989..213158,213262..>213499)	Acanthamoeba castellanii str. Neff	14920812
ACA1_112790	mRNA	ACA1_112790	NW_004457554.1	213911	215034	R	ACA1_112790	complement(join(<213911..214120,214210..214306,214435..214523,214605..214726,214836..>215034))	Acanthamoeba castellanii str. Neff	14920813
ACA1_112800	mRNA	ACA1_112800	NW_004457554.1	215125	216676	R	ACA1_112800	complement(join(<215125..215219,215304..215412,215503..215552,215626..215762,215862..216159,216258..216420,216530..>216676))	Acanthamoeba castellanii str. Neff	14920814
ACA1_112810	mRNA	ACA1_112810	NW_004457554.1	217453	223115	D	ACA1_112810	join(<217453..217908,218137..218315,218379..218559,218632..220005,220098..220196,220270..220364,220483..220723,220804..220946,221048..221225,221347..221511,221641..221860,221952..222065,222199..222314,222414..222549,222658..222750,222834..222919,223014..>223115)	Acanthamoeba castellanii str. Neff	14920815
ACA1_112820	mRNA	ACA1_112820	NW_004457554.1	223535	224292	R	ACA1_112820	complement(join(<223535..223584,223644..>224292))	Acanthamoeba castellanii str. Neff	14920816
ACA1_112830	mRNA	ACA1_112830	NW_004457554.1	225144	227958	R	ACA1_112830	complement(join(<225144..225152,225181..225300,225447..225471,225558..225646,225740..225861,225983..226230,226268..226361,226465..226573,226680..226729,226815..226954,227026..227305,227359..227533,227644..227776,227918..>227958))	Acanthamoeba castellanii str. Neff	14920817
ACA1_112840	mRNA	ACA1_112840	NW_004457554.1	228184	230217	R	ACA1_112840	complement(join(<228184..229797,230014..>230217))	Acanthamoeba castellanii str. Neff	14920818
ACA1_112850	mRNA	ACA1_112850	NW_004457554.1	231074	234899	D	ACA1_112850	join(<231074..231317,231387..231452,231552..231755,231857..232018,232077..232225,232256..232453,232552..232685,232759..232911,233000..233077,233177..233275,233359..233511,233592..233776,233878..234061,234185..234321,234400..234480,234569..234641,234731..>234899)	Acanthamoeba castellanii str. Neff	14920819
ACA1_112860	mRNA	ACA1_112860	NW_004457554.1	235101	235712	R	ACA1_112860	complement(join(<235101..235298,235380..>235712))	Acanthamoeba castellanii str. Neff	14920820
ACA1_112870	mRNA	ACA1_112870	NW_004457554.1	235895	237292	D	ACA1_112870	join(<235895..236057,236149..236260,236387..236453,236556..236660,236803..236964,237083..>237292)	Acanthamoeba castellanii str. Neff	14920821
ACA1_112880	mRNA	ACA1_112880	NW_004457554.1	237862	239527	R	ACA1_112880	complement(join(<237862..238050,238151..238324,238415..238523,238638..238766,238859..239013,239103..239281,239395..>239527))	Acanthamoeba castellanii str. Neff	14920822
ACA1_112890	mRNA	ACA1_112890	NW_004457554.1	239930	242810	R	ACA1_112890	complement(join(<239930..240098,240198..240386,240492..240588,240835..240958,241057..241142,241263..241404,241524..241631,241731..241740,241807..241910,242058..242189,242358..242620,242726..>242810))	Acanthamoeba castellanii str. Neff	14920823
ACA1_112900	mRNA	ACA1_112900	NW_004457554.1	243141	244613	D	ACA1_112900	join(<243141..243378,243439..243521,243617..243803,243904..244034,244120..244284,244374..>244613)	Acanthamoeba castellanii str. Neff	14920824
ACA1_112910	mRNA	ACA1_112910	NW_004457554.1	244726	246942	D	ACA1_112910	join(<244726..244977,245108..245144,245226..245324,245456..245602,245685..245784,245865..245969,246063..246148,246230..246300,246443..246539,246608..246728,246831..>246942)	Acanthamoeba castellanii str. Neff	14920825
ACA1_112920	mRNA	ACA1_112920	NW_004457554.1	247304	249457	D	ACA1_112920	join(<247304..247475,247579..247686,247779..247875,247967..248075,248145..248267,248391..248535,248616..248704,248792..248882,248979..>249457)	Acanthamoeba castellanii str. Neff	14920826
ACA1_112930	mRNA	ACA1_112930	NW_004457554.1	249527	250725	R	ACA1_112930	complement(join(<249527..249625,249734..249874,249987..250235,250365..250441,250587..>250725))	Acanthamoeba castellanii str. Neff	14920827
ACA1_112940	mRNA	ACA1_112940	NW_004457554.1	250775	251907	R	ACA1_112940	complement(join(<250775..250780,250908..251039,251135..251294,251442..251557,251656..>251907))	Acanthamoeba castellanii str. Neff	14920828
ACA1_112950	mRNA	ACA1_112950	NW_004457554.1	252087	257001	R	ACA1_112950	complement(join(<252087..252182,252306..252412,252521..252614,252687..252842,252945..253133,253217..253324,253410..253478,253563..253724,253804..253952,254019..254110,254203..254337,254429..254809,254918..254962,255030..255166,255249..255359,255474..255644,255720..255877,256017..>257001))	Acanthamoeba castellanii str. Neff	14920829
ACA1_112960	mRNA	ACA1_112960	NW_004457554.1	257167	258718	D	ACA1_112960	join(<257167..257350,257497..257630,257720..257865,257931..258096,258174..258278,258384..258528,258627..>258718)	Acanthamoeba castellanii str. Neff	14920830
ACA1_112970	mRNA	ACA1_112970	NW_004457554.1	259026	261181	D	ACA1_112970	join(<259026..259089,259167..259267,259468..259652,259841..259906,259977..260165,260289..260367,260470..260712,260784..260906,261044..>261181)	Acanthamoeba castellanii str. Neff	14920831
ACA1_112980	mRNA	ACA1_112980	NW_004457554.1	261328	267888	D	ACA1_112980	join(<261328..261510,261637..261715,261860..261901,262026..262297,262432..262494,262573..262621,262726..262753,262859..262948,263072..263195,263382..263492,263581..263651,263747..263847,263928..263983,264194..264400,264551..264656,264870..264952,265060..265143,265396..265526,265617..265749,265900..265978,266061..266134,266234..266420,266547..266614,266790..266871,267013..267091,267274..267463,267552..267732,267818..>267888)	Acanthamoeba castellanii str. Neff	14920832
ACA1_113190	mRNA	ACA1_113190	NW_004457554.1	268708	269996	D	ACA1_113190	join(<268708..268902,268999..269130,269264..269365,269458..269564,269582..>269996)	Acanthamoeba castellanii str. Neff	14920833
ACA1_113200	mRNA	ACA1_113200	NW_004457554.1	270140	270931	R	ACA1_113200	complement(join(<270140..270175,270212..270370,270485..270639,270775..270827,270891..>270931))	Acanthamoeba castellanii str. Neff	14920834
ACA1_113310	mRNA	ACA1_113310	NW_004457554.1	271098	271406	D	ACA1_113310	<271098..>271406	Acanthamoeba castellanii str. Neff	14920835
ACA1_113420	mRNA	ACA1_113420	NW_004457554.1	273363	273521	D	ACA1_113420	<273363..>273521	Acanthamoeba castellanii str. Neff	14920836
ACA1_113430	mRNA	ACA1_113430	NW_004457554.1	274010	274396	R	ACA1_113430	complement(<274010..>274396)	Acanthamoeba castellanii str. Neff	14920837
ACA1_113440	mRNA	ACA1_113440	NW_004457554.1	274558	277351	D	ACA1_113440	join(<274558..274743,274854..275010,275201..275370,275492..275550,275787..275843,275950..275976,276135..276245,276357..276420,276531..276640,276823..277101,277222..>277351)	Acanthamoeba castellanii str. Neff	14920838
ACA1_113450	mRNA	ACA1_113450	NW_004457554.1	277880	278737	D	ACA1_113450	<277880..>278737	Acanthamoeba castellanii str. Neff	14920839
ACA1_113460	mRNA	ACA1_113460	NW_004457554.1	279007	282276	R	ACA1_113460	complement(join(<279007..279121,279276..279420,279545..279662,279771..279871,280016..280169,280293..280494,280646..280761,280924..281076,281240..281455,281560..281700,281887..282028,282107..>282276))	Acanthamoeba castellanii str. Neff	14920840
ACA1_113470	mRNA	ACA1_113470	NW_004457554.1	282595	287517	R	ACA1_113470	complement(join(<282595..282742,282766..283538,283653..283722,283885..284131,284299..284443,284609..284758,284881..285132,285252..285516,285687..285726,285870..285923,286020..286151,286261..286407,286540..286608,286743..286776,286886..286980,287096..287190,287309..>287517))	Acanthamoeba castellanii str. Neff	14920841
ACA1_113480	mRNA	ACA1_113480	NW_004457554.1	287692	293487	R	ACA1_113480	complement(join(<287692..287838,287971..288166,288239..288333,288412..288459,288568..288981,288994..289042,289172..289316,289493..289716,289811..289945,290212..290334,290508..290620,290831..291252,291397..291484,291679..291828,291932..292095,292357..292409,292684..292942,293064..>293487))	Acanthamoeba castellanii str. Neff	14920842
ACA1_113490	mRNA	ACA1_113490	NW_004457554.1	293756	297186	R	ACA1_113490	complement(join(<293756..293914,294055..294158,294363..294422,294532..294625,294776..294835,294992..295110,295258..295300,295464..295569,295694..295777,295873..295920,296038..296110,296221..296279,296421..296515,296607..296719,296787..>297186))	Acanthamoeba castellanii str. Neff	14920843
ACA1_113500	mRNA	ACA1_113500	NW_004457554.1	300313	302370	D	ACA1_113500	<300313..>302370	Acanthamoeba castellanii str. Neff	14920844
ACA1_113510	mRNA	ACA1_113510	NW_004457554.1	302954	307882	D	ACA1_113510	join(<302954..303246,303465..303512,303594..303837,303925..304104,304242..304335,304477..304529,304809..305048,305172..305402,305509..305710,305902..306525,306744..307027,307126..307334,307439..307563,307737..>307882)	Acanthamoeba castellanii str. Neff	14920845
ACA1_113520	mRNA	ACA1_113520	NW_004457554.1	308002	308655	R	ACA1_113520	complement(join(<308002..308322,308395..>308655))	Acanthamoeba castellanii str. Neff	14920846
ACA1_113530	mRNA	ACA1_113530	NW_004457554.1	309048	310774	D	ACA1_113530	join(<309048..309179,309359..309519,309570..309600,309686..309815,309995..310070,310188..310263,310338..310396,310456..>310774)	Acanthamoeba castellanii str. Neff	14920847
ACA1_113540	mRNA	ACA1_113540	NW_004457554.1	313230	314996	R	ACA1_113540	complement(join(<313230..313249,313356..313580,313659..313799,313874..314042,314080..314179,314265..314491,314619..314829,314914..>314996))	Acanthamoeba castellanii str. Neff	14920848
ACA1_113550	mRNA	ACA1_113550	NW_004457554.1	315138	316034	R	ACA1_113550	complement(join(<315138..315464,315580..315629,315812..>316034))	Acanthamoeba castellanii str. Neff	14920849
ACA1_113560	mRNA	ACA1_113560	NW_004457554.1	316125	322352	R	ACA1_113560	complement(join(<316125..317612,317681..317759,317915..318059,318162..318267,318424..319114,319289..319472,319686..319767,319997..320076,320327..320418,320675..320802,321018..321125,321312..321431,321592..321720,321869..322062,322226..>322352))	Acanthamoeba castellanii str. Neff	14920850
ACA1_113570	mRNA	ACA1_113570	NW_004457554.1	322697	323843	R	ACA1_113570	complement(join(<322697..322833,322844..322902,323050..323176,323232..323310,323489..323596,323673..>323843))	Acanthamoeba castellanii str. Neff	14920851
ACA1_113580	mRNA	ACA1_113580	NW_004457554.1	324359	325352	R	ACA1_113580	complement(join(<324359..324523,324680..324781,324803..324903,324973..325042,325143..>325352))	Acanthamoeba castellanii str. Neff	14920852
ACA1_113590	mRNA	ACA1_113590	NW_004457554.1	325900	327863	D	ACA1_113590	join(<325900..326713,326856..326909,327050..327129,327279..>327863)	Acanthamoeba castellanii str. Neff	14920853
ACA1_113600	mRNA	ACA1_113600	NW_004457554.1	328280	330109	D	ACA1_113600	join(<328280..328492,328612..328668,328785..328866,328929..329049,329201..329459,329578..329736,329837..>330109)	Acanthamoeba castellanii str. Neff	14920854
ACA1_113610	mRNA	ACA1_113610	NW_004457554.1	330282	332805	R	ACA1_113610	complement(join(<330282..330836,331015..331149,331507..331658,331806..331967,332147..332312,332451..332491,332670..>332805))	Acanthamoeba castellanii str. Neff	14920855
ACA1_113620	mRNA	ACA1_113620	NW_004457554.1	333031	335140	R	ACA1_113620	complement(join(<333031..333308,333362..333457,333503..333718,333870..334008,334177..334247,334450..>335140))	Acanthamoeba castellanii str. Neff	14920856
ACA1_113630	mRNA	ACA1_113630	NW_004457554.1	336385	337524	D	ACA1_113630	join(<336385..337222,337343..>337524)	Acanthamoeba castellanii str. Neff	14920857
ACA1_113640	mRNA	ACA1_113640	NW_004457554.1	339639	342196	D	ACA1_113640	join(<339639..339837,340108..340549,340592..340727,340803..341169,341400..341615,341745..>342196)	Acanthamoeba castellanii str. Neff	14920858
ACA1_113650	mRNA	ACA1_113650	NW_004457554.1	342572	343682	D	ACA1_113650	join(<342572..342687,342817..343048,343173..343300,343385..>343682)	Acanthamoeba castellanii str. Neff	14920859
ACA1_113660	mRNA	ACA1_113660	NW_004457554.1	343819	344837	R	ACA1_113660	complement(join(<343819..343997,344125..344264,344411..344577,344673..344745,344758..>344837))	Acanthamoeba castellanii str. Neff	14920860
ACA1_113670	mRNA	ACA1_113670	NW_004457554.1	344918	346979	R	ACA1_113670	complement(join(<344918..345171,345292..345366,345569..345611,345662..345796,345920..346195,346391..346446,346556..>346979))	Acanthamoeba castellanii str. Neff	14920861
ACA1_113680	mRNA	ACA1_113680	NW_004457554.1	347123	350591	R	ACA1_113680	complement(join(<347123..347296,347497..347553,347624..347725,347911..348092,348217..348301,348410..348603,348819..348896,349060..349159,349523..349628,349795..349865,350147..350233,350372..350432,350539..>350591))	Acanthamoeba castellanii str. Neff	14920862
ACA1_113700	mRNA	ACA1_113700	NW_004457554.1	355597	357807	R	ACA1_113700	complement(join(<355597..355802,355922..355993,356096..356301,356531..356637,356747..356803,356905..357040,357203..357299,357687..>357807))	Acanthamoeba castellanii str. Neff	14920864
ACA1_113710	mRNA	ACA1_113710	NW_004457554.1	358588	360267	D	ACA1_113710	join(<358588..358764,358842..358935,359021..359070,359210..359362,359457..359636,359745..359967,360053..>360267)	Acanthamoeba castellanii str. Neff	14920865
ACA1_113720	mRNA	ACA1_113720	NW_004457554.1	360584	361249	D	ACA1_113720	<360584..>361249	Acanthamoeba castellanii str. Neff	14920866
ACA1_113730	mRNA	ACA1_113730	NW_004457554.1	361445	362280	D	ACA1_113730	join(<361445..361489,361753..>362280)	Acanthamoeba castellanii str. Neff	14920867
ACA1_113740	mRNA	ACA1_113740	NW_004457554.1	362632	363191	D	ACA1_113740	join(<362632..362720,362807..362964,363043..>363191)	Acanthamoeba castellanii str. Neff	14920868
ACA1_113750	mRNA	ACA1_113750	NW_004457554.1	363236	364728	D	ACA1_113750	join(<363236..363300,363441..363546,363829..363882,363987..364060,364176..364473,364582..>364728)	Acanthamoeba castellanii str. Neff	14920869
ACA1_113760	mRNA	ACA1_113760	NW_004457554.1	364796	365419	R	ACA1_113760	complement(join(<364796..364929,365047..365143,365249..>365419))	Acanthamoeba castellanii str. Neff	14920870
ACA1_113770	mRNA	ACA1_113770	NW_004457554.1	365605	370759	D	ACA1_113770	join(<365605..365911,366020..366151,366259..366362,366519..366736,366875..367043,367152..367232,367479..367688,367799..367880,368020..368131,368245..368326,368420..368483,368598..368699,368863..368946,369022..369236,369322..369382,369450..369550,369680..369785,369855..369911,370060..370168,370298..370357,370426..>370759)	Acanthamoeba castellanii str. Neff	14920871
ACA1_113780	mRNA	ACA1_113780	NW_004457554.1	370905	372338	D	ACA1_113780	join(<370905..371190,371259..371347,371464..371695,371830..371922,372013..372113,372195..>372338)	Acanthamoeba castellanii str. Neff	14920872
ACA1_113790	mRNA	ACA1_113790	NW_004457554.1	372526	374418	D	ACA1_113790	join(<372526..372562,372643..372792,372924..373085,373176..373372,373438..373491,373631..373803,373883..373926,374027..374135,374232..>374418)	Acanthamoeba castellanii str. Neff	14920873
ACA1_113800	mRNA	ACA1_113800	NW_004457554.1	374477	376819	R	ACA1_113800	complement(join(<374477..375099,375221..375977,376070..>376819))	Acanthamoeba castellanii str. Neff	14920874
ACA1_113810	mRNA	ACA1_113810	NW_004457554.1	377164	377966	R	ACA1_113810	complement(join(<377164..377568,377649..>377966))	Acanthamoeba castellanii str. Neff	14920875
ACA1_113820	mRNA	ACA1_113820	NW_004457554.1	378196	381258	R	ACA1_113820	complement(join(<378196..378329,378396..378893,378977..379078,379194..379511,379584..379685,379789..379929,380085..380178,380525..380725,380740..>381258))	Acanthamoeba castellanii str. Neff	14920876
ACA1_113830	mRNA	ACA1_113830	NW_004457554.1	382752	385723	D	ACA1_113830	join(<382752..382807,382891..382983,383005..383343,383776..384107,384229..384385,384529..384615,384749..384902,385018..385147,385259..385474,385568..385605,385682..>385723)	Acanthamoeba castellanii str. Neff	14920877
ACA1_113840	mRNA	ACA1_113840	NW_004457554.1	385957	386938	D	ACA1_113840	join(<385957..386230,386356..386506,386619..386700,386783..>386938)	Acanthamoeba castellanii str. Neff	14920878
ACA1_113850	mRNA	ACA1_113850	NW_004457554.1	387015	387958	R	ACA1_113850	complement(join(<387015..387080,387182..387282,387363..387422,387517..387612,387703..387832,387920..>387958))	Acanthamoeba castellanii str. Neff	14920879
ACA1_113860	mRNA	ACA1_113860	NW_004457554.1	388372	391139	D	ACA1_113860	join(<388372..388539,388648..388749,388864..388966,389058..389186,389285..389376,389470..389601,389664..389734,389892..390126,390218..390316,390440..390558,390651..390882,391029..>391139)	Acanthamoeba castellanii str. Neff	14920880
ACA1_113870	mRNA	ACA1_113870	NW_004457554.1	391599	397302	D	ACA1_113870	join(<391599..391704,391810..391942,392101..392225,392332..392445,392549..392641,392776..392913,393000..393189,393269..393324,393452..393544,393625..393671,393806..393861,393972..394111,394217..394303,394439..394569,394659..394793,394923..395088,395200..395339,395492..395599,395641..395648,395756..395824,396018..396188,396334..396412,396511..396587,396704..396807,396951..397111,397204..>397302)	Acanthamoeba castellanii str. Neff	14920881
ACA1_113880	mRNA	ACA1_113880	NW_004457554.1	397587	400601	R	ACA1_113880	complement(join(<397587..397647,397737..397824,397931..398244,398354..399220,399274..399649,399753..400260,400491..>400601))	Acanthamoeba castellanii str. Neff	14920882
ACA1_113890	mRNA	ACA1_113890	NW_004457554.1	401299	402092	R	ACA1_113890	complement(join(<401299..401877,401976..>402092))	Acanthamoeba castellanii str. Neff	14920883
ACA1_113900	mRNA	ACA1_113900	NW_004457554.1	403098	408324	D	ACA1_113900	join(<403098..403149,403455..404496,404592..404700,404813..405028,405146..405292,405399..405534,405606..405726,405740..406082,406179..406595,406682..406812,406915..407008,407100..407271,407373..407569,407650..407727,407805..407897,407981..408065,408164..>408324)	Acanthamoeba castellanii str. Neff	14920884
ACA1_113910	mRNA	ACA1_113910	NW_004457554.1	408530	415555	R	ACA1_113910	complement(join(<408530..408733,408816..408956,409036..409191,409303..409546,409641..409752,409827..410133,410267..410407,410510..410656,410772..410886,411003..411095,411167..411212,411380..411527,411620..411814,411933..412079,412186..412351,412428..412619,412996..413142,413258..413403,413511..413633,413720..413899,414030..414199,414337..414423,414504..414620,414734..414848,414915..415078,415157..415217,415382..>415555))	Acanthamoeba castellanii str. Neff	14920885
ACA1_113920	mRNA	ACA1_113920	NW_004457554.1	415654	417834	D	ACA1_113920	join(<415654..415755,415850..416014,416153..416421,416506..416612,416730..416896,416979..417144,417254..417396,417496..417603,417715..>417834)	Acanthamoeba castellanii str. Neff	14920886
ACA1_113930	mRNA	ACA1_113930	NW_004457554.1	417933	420272	R	ACA1_113930	complement(join(<417933..418176,418291..418502,418606..418859,418956..419185,419277..419376,419462..419589,419677..419989,420122..>420272))	Acanthamoeba castellanii str. Neff	14920887
ACA1_113940	mRNA	ACA1_113940	NW_004457554.1	420446	425538	R	ACA1_113940	complement(join(<420446..420989,421120..421242,421371..421492,421620..421919,422021..422179,422258..422410,422562..422654,422761..422946,423033..423167,423308..423944,424066..424202,424314..424434,424571..424905,425045..425304,425418..>425538))	Acanthamoeba castellanii str. Neff	14920888
ACA1_113950	mRNA	ACA1_113950	NW_004457554.1	425608	426172	D	ACA1_113950	join(<425608..425869,425969..426024,426101..>426172)	Acanthamoeba castellanii str. Neff	14920889
ACA1_113970	mRNA	ACA1_113970	NW_004457554.1	428467	429551	R	ACA1_113970	complement(join(<428467..429070,429184..>429551))	Acanthamoeba castellanii str. Neff	14920891
ACA1_113980	mRNA	ACA1_113980	NW_004457554.1	429812	430721	D	ACA1_113980	join(<429812..430013,430101..430486,430506..>430721)	Acanthamoeba castellanii str. Neff	14920892
ACA1_113990	mRNA	ACA1_113990	NW_004457554.1	430731	431582	R	ACA1_113990	complement(join(<430731..430803,430904..431004,431171..431234,431322..431412,431534..>431582))	Acanthamoeba castellanii str. Neff	14920893
ACA1_114100	mRNA	ACA1_114100	NW_004457554.1	433070	433563	R	ACA1_114100	complement(join(<433070..433110,433194..>433563))	Acanthamoeba castellanii str. Neff	14920894
ACA1_114110	mRNA	ACA1_114110	NW_004457554.1	433788	434834	D	ACA1_114110	join(<433788..434134,434194..434370,434381..>434834)	Acanthamoeba castellanii str. Neff	14920895
ACA1_114120	mRNA	ACA1_114120	NW_004457554.1	434857	435595	R	ACA1_114120	complement(join(<434857..434929,435010..435110,435230..435293,435381..435471,435547..>435595))	Acanthamoeba castellanii str. Neff	14920896
ACA1_114130	mRNA	ACA1_114130	NW_004457554.1	435842	437218	R	ACA1_114130	complement(join(<435842..435978,436108..436270,436378..436608,436649..436911,437086..>437218))	Acanthamoeba castellanii str. Neff	14920897
ACA1_114140	mRNA	ACA1_114140	NW_004457554.1	437627	438779	D	ACA1_114140	join(<437627..437785,437883..438040,438091..438166,438314..438509,438622..>438779)	Acanthamoeba castellanii str. Neff	14920898
ACA1_114150	mRNA	ACA1_114150	NW_004457554.1	438875	440905	R	ACA1_114150	complement(join(<438875..439018,439120..439202,439331..439440,439513..439646,439755..439899,439967..440112,440212..440399,440547..440649,440807..>440905))	Acanthamoeba castellanii str. Neff	14920899
ACA1_114160	mRNA	ACA1_114160	NW_004457554.1	441109	442091	R	ACA1_114160	complement(join(<441109..441673,441745..>442091))	Acanthamoeba castellanii str. Neff	14920900
ACA1_114270	mRNA	ACA1_114270	NW_004457554.1	445142	447755	R	ACA1_114270	complement(join(<445142..445627,445736..445986,446088..446303,446380..447031,447151..447255,447681..>447755))	Acanthamoeba castellanii str. Neff	14920901
ACA1_114300	mRNA	ACA1_114300	NW_004457554.1	455934	458793	D	ACA1_114300	join(<455934..456081,456216..456367,456535..456606,456708..456761,456897..456986,457125..457248,457415..457504,457595..457686,457808..457950,458071..458183,458654..>458793)	Acanthamoeba castellanii str. Neff	14920904
ACA1_114410	mRNA	ACA1_114410	NW_004457554.1	459121	460694	D	ACA1_114410	join(<459121..459243,459392..459437,459667..459811,459880..460315,460405..460574,460649..>460694)	Acanthamoeba castellanii str. Neff	14920905
ACA1_114420	mRNA	ACA1_114420	NW_004457554.1	460775	463660	R	ACA1_114420	complement(join(<460775..460900,461172..461257,461374..461459,461492..461604,461713..461794,461896..461989,462148..462264,462400..462521,462667..462769,463117..463381,463490..>463660))	Acanthamoeba castellanii str. Neff	14920906
ACA1_114430	mRNA	ACA1_114430	NW_004457554.1	463771	470306	R	ACA1_114430	complement(join(<463771..463887,463966..464126,464223..464467,464554..464692,464768..464957,465032..465088,465184..465324,465400..465620,465710..466041,466144..466328,466428..466618,466796..467200,467313..467331,467521..467580,467705..467830,467914..468173,468261..468378,468458..468666,468836..469049,469124..469398,469526..470003,470223..>470306))	Acanthamoeba castellanii str. Neff	14920907
ACA1_114440	mRNA	ACA1_114440	NW_004457554.1	470632	473179	R	ACA1_114440	complement(join(<470632..470742,470860..471011,471098..471164,471252..471341,471431..471528,471630..471762,471847..471947,472073..472181,472296..472477,472652..472772,472865..472907,473037..>473179))	Acanthamoeba castellanii str. Neff	14920908
ACA1_114450	mRNA	ACA1_114450	NW_004457554.1	473477	476775	R	ACA1_114450	complement(join(<473477..473487,473587..473707,473817..473911,474031..474163,474293..474348,474455..474578,474661..474706,474791..474922,474992..475059,475157..475264,475339..475467,475578..475682,475878..475940,476073..476214,476354..476448,476558..476635,476740..>476775))	Acanthamoeba castellanii str. Neff	14920909
ACA1_114460	mRNA	ACA1_114460	NW_004457554.1	477139	477534	R	ACA1_114460	complement(<477139..>477534)	Acanthamoeba castellanii str. Neff	14920910
ACA1_114470	mRNA	ACA1_114470	NW_004457554.1	477987	483667	D	ACA1_114470	join(<477987..478156,478252..478387,478455..478544,478658..478729,478794..478862,478937..479722,479781..480692,480789..480915,480997..481115,481213..481346,481485..481527,481611..481775,481800..481866,481994..482028,482226..482446,482529..482617,482770..482878,483015..483180,483254..>483667)	Acanthamoeba castellanii str. Neff	14920911
ACA1_114480	mRNA	ACA1_114480	NW_004457554.1	484009	485560	D	ACA1_114480	join(<484009..484383,484628..484684,484742..>485560)	Acanthamoeba castellanii str. Neff	14920912
ACA1_114490	mRNA	ACA1_114490	NW_004457554.1	485992	486522	D	ACA1_114490	join(<485992..486086,486164..486314,486421..>486522)	Acanthamoeba castellanii str. Neff	14920913
ACA1_114500	mRNA	ACA1_114500	NW_004457554.1	486621	488806	R	ACA1_114500	complement(join(<486621..486753,486820..486959,487043..487243,487348..487494,487583..487740,487840..487925,487992..>488806))	Acanthamoeba castellanii str. Neff	14920914
ACA1_114510	mRNA	ACA1_114510	NW_004457554.1	489270	491192	D	ACA1_114510	join(<489270..489534,489612..489764,489927..490067,490178..490342,490426..490590,490688..490850,490982..>491192)	Acanthamoeba castellanii str. Neff	14920915
ACA1_114520	mRNA	ACA1_114520	NW_004457554.1	491597	493782	R	ACA1_114520	complement(join(<491597..491760,491904..492057,492171..492254,492311..492505,492630..492754,492867..492963,493083..493149,493239..493298,493374..493512,493593..>493782))	Acanthamoeba castellanii str. Neff	14920916
ACA1_114530	mRNA	ACA1_114530	NW_004457554.1	494371	502639	D	ACA1_114530	join(<494371..494676,494712..494972,495008..495236,495358..495598,495694..495884,496013..496169,496274..496358,496459..496608,496703..496999,497126..497441,497513..497733,497864..497978,498016..498718,498804..498997,499123..499409,499486..499601,499684..499762,499849..499971,500059..500128,500294..500571,500686..500877,501002..501075,501389..501551,501675..502380,502404..>502639)	Acanthamoeba castellanii str. Neff	14920917
ACA1_114540	mRNA	ACA1_114540	NW_004457554.1	502768	504527	R	ACA1_114540	complement(join(<502768..502827,502900..503026,503153..503331,503457..503593,503725..503826,503930..>504527))	Acanthamoeba castellanii str. Neff	14920918
ACA1_114550	mRNA	ACA1_114550	NW_004457554.1	504887	508591	R	ACA1_114550	complement(join(<504887..505066,505285..505403,505587..505811,505931..507506,507573..507901,507976..>508591))	Acanthamoeba castellanii str. Neff	14920919
ACA1_114560	mRNA	ACA1_114560	NW_004457554.1	509235	513234	D	ACA1_114560	join(<509235..509314,509382..509506,509584..509777,509896..510048,510137..510403,510514..510675,510778..510928,511030..511171,511264..511405,511494..511584,511706..511901,512015..512120,512252..512413,512498..512600,512674..512940,513044..>513234)	Acanthamoeba castellanii str. Neff	14920920
ACA1_114570	mRNA	ACA1_114570	NW_004457554.1	513395	514721	R	ACA1_114570	complement(join(<513395..513524,513609..513759,513895..514095,514167..514334,514439..>514721))	Acanthamoeba castellanii str. Neff	14920921
ACA1_114580	mRNA	ACA1_114580	NW_004457554.1	515102	516742	R	ACA1_114580	complement(join(<515102..516183,516406..>516742))	Acanthamoeba castellanii str. Neff	14920922
ACA1_114590	mRNA	ACA1_114590	NW_004457554.1	517514	519449	R	ACA1_114590	complement(join(<517514..517525,517610..517662,517782..517824,517947..518027,518182..518294,518411..518436,518589..518609,518713..518789,518947..519096,519336..>519449))	Acanthamoeba castellanii str. Neff	14920923
ACA1_114600	mRNA	ACA1_114600	NW_004457554.1	519294	520499	D	ACA1_114600	join(<519294..519428,519671..519829,519921..519964,520123..520203,520322..>520499)	Acanthamoeba castellanii str. Neff	14920925
ACA1_114620	mRNA	ACA1_114620	NW_004457554.1	527460	528110	D	ACA1_114620	join(<527460..527485,527768..>528110)	Acanthamoeba castellanii str. Neff	14920926
ACA1_114630	mRNA	ACA1_114630	NW_004457554.1	528328	530468	D	ACA1_114630	join(<528328..528389,528520..528706,528913..529111,529269..529395,529467..529587,529698..529835,529969..530134,530230..530301,530440..>530468)	Acanthamoeba castellanii str. Neff	14920927
ACA1_114640	mRNA	ACA1_114640	NW_004457554.1	530845	531177	D	ACA1_114640	join(<530845..530880,530965..>531177)	Acanthamoeba castellanii str. Neff	14920928
ACA1_114650	mRNA	ACA1_114650	NW_004457554.1	531291	531714	R	ACA1_114650	complement(join(<531291..531392,531466..531548,531645..>531714))	Acanthamoeba castellanii str. Neff	14920929
ACA1_114660	mRNA	ACA1_114660	NW_004457554.1	531983	537880	R	ACA1_114660	complement(join(<531983..532135,532270..532414,532574..532697,532862..532949,533060..533182,533297..533511,533596..533782,533850..533970,534292..534403,534575..534955,535277..535424,535549..535650,535854..536079,536174..536352,536523..536627,536724..536808,536936..537053,537153..537418,537567..537721,537806..>537880))	Acanthamoeba castellanii str. Neff	14920930
ACA1_114770	mRNA	ACA1_114770	NW_004457554.1	538052	540095	D	ACA1_114770	join(<538052..538683,538774..539732,539815..>540095)	Acanthamoeba castellanii str. Neff	14920931
ACA1_114780	mRNA	ACA1_114780	NW_004457554.1	540265	542354	R	ACA1_114780	complement(join(<540265..541644,541655..542221,542322..>542354))	Acanthamoeba castellanii str. Neff	14920932
ACA1_114790	mRNA	ACA1_114790	NW_004457554.1	542531	545052	D	ACA1_114790	join(<542531..542839,542948..543066,543166..543838,543887..544519,544612..544819,544946..>545052)	Acanthamoeba castellanii str. Neff	14920933
ACA1_114800	mRNA	ACA1_114800	NW_004457554.1	545155	547020	D	ACA1_114800	join(<545155..545379,545581..545663,545761..545843,546019..546083,546200..546264,546348..546427,546551..546688,546797..>547020)	Acanthamoeba castellanii str. Neff	14920934
ACA1_114810	mRNA	ACA1_114810	NW_004457554.1	547154	548707	D	ACA1_114810	join(<547154..547298,547376..547447,547587..547813,547911..548094,548187..548260,548366..548506,548615..>548707)	Acanthamoeba castellanii str. Neff	14920935
ACA1_114820	mRNA	ACA1_114820	NW_004457554.1	548964	553399	D	ACA1_114820	join(<548964..549163,549294..549520,549637..549685,549786..549912,549998..550184,550332..550501,550589..550714,550800..551005,551285..551417,551511..551611,551715..551781,551870..552153,552227..552286,552393..552537,552607..552762,552886..552966,553064..553198,553271..>553399)	Acanthamoeba castellanii str. Neff	14920936
ACA1_114830	mRNA	ACA1_114830	NW_004457554.1	553508	553933	D	ACA1_114830	<553508..>553933	Acanthamoeba castellanii str. Neff	14920937
ACA1_114840	mRNA	ACA1_114840	NW_004457554.1	555183	559853	D	ACA1_114840	join(<555183..555296,555426..555719,555819..556590,556716..556766,556853..557024,557165..557247,557361..557459,557609..557714,557808..557938,558022..558197,558493..558594,558744..558884,558990..559119,559252..559330,559429..559497,559604..559674,559768..>559853)	Acanthamoeba castellanii str. Neff	14920938
ACA1_114850	mRNA	ACA1_114850	NW_004457554.1	561061	566840	D	ACA1_114850	join(<561061..561071,561090..561474,561577..561771,562123..562395,562500..562711,562809..562890,563011..563088,563185..563864,563932..564126,564207..564595,564736..564839,564975..565066,565242..565357,565468..>566840)	Acanthamoeba castellanii str. Neff	14920939
ACA1_114860	mRNA	ACA1_114860	NW_004457554.1	567007	569027	R	ACA1_114860	complement(join(<567007..567689,567814..567975,568123..568266,568357..568485,568550..568623,568747..>569027))	Acanthamoeba castellanii str. Neff	14920940
ACA1_114870	mRNA	ACA1_114870	NW_004457554.1	569314	572909	D	ACA1_114870	join(<569314..569532,569605..569913,570048..570114,570208..570383,570473..570532,570657..570774,570885..570996,571131..571229,571356..571675,571792..571922,572013..572228,572315..572632,572718..>572909)	Acanthamoeba castellanii str. Neff	14920941
ACA1_114880	mRNA	ACA1_114880	NW_004457554.1	573397	573825	D	ACA1_114880	<573397..>573825	Acanthamoeba castellanii str. Neff	14920942
ACA1_114890	mRNA	ACA1_114890	NW_004457554.1	574478	575336	D	ACA1_114890	join(<574478..574688,574786..>575336)	Acanthamoeba castellanii str. Neff	14920943
ACA1_114900	mRNA	ACA1_114900	NW_004457554.1	575469	581329	R	ACA1_114900	complement(join(<575469..575738,576094..576152,576254..576366,576478..576604,576762..576860,576960..577032,577193..577238,577359..577510,577608..577759,577839..578092,578166..578382,578544..578712,578889..579067,579158..579382,579473..579577,579677..579749,579853..579927,580012..580082,580200..580430,580542..580711,580819..580847,580941..581123,581252..>581329))	Acanthamoeba castellanii str. Neff	14920944
ACA1_114910	mRNA	ACA1_114910	NW_004457554.1	581867	585824	R	ACA1_114910	complement(join(<581867..582367,582389..582408,582520..582788,582803..582912,583012..583124,583221..584155,584275..584350,584420..584477,584579..584767,584909..585075,585185..585314,585439..585661,585814..>585824))	Acanthamoeba castellanii str. Neff	14920945
ACA1_114920	mRNA	ACA1_114920	NW_004457554.1	586508	587783	D	ACA1_114920	join(<586508..586689,586786..586926,587017..587100,587181..587222,587331..587667,587760..>587783)	Acanthamoeba castellanii str. Neff	14920946
ACA1_114930	mRNA	ACA1_114930	NW_004457554.1	588090	593206	D	ACA1_114930	join(<588090..588245,588538..588627,588704..589143,589238..589338,589430..589572,589661..589756,590044..590070,590087..590326,590453..590596,590680..590883,590979..591233,591565..591686,591806..591908,592036..592197,592366..592494,592604..592795,592931..>593206)	Acanthamoeba castellanii str. Neff	14920947
ACA1_115040	mRNA	ACA1_115040	NW_004457554.1	593302	595114	R	ACA1_115040	complement(join(<593302..593832,593946..594062,594172..594335,594424..594526,594625..594850,594932..594989,595084..>595114))	Acanthamoeba castellanii str. Neff	14920948
ACA1_115050	mRNA	ACA1_115050	NW_004457554.1	596007	596976	D	ACA1_115050	join(<596007..596217,596360..596571,596674..>596976)	Acanthamoeba castellanii str. Neff	14920949
ACA1_115160	mRNA	ACA1_115160	NW_004457554.1	597585	598162	R	ACA1_115160	complement(join(<597585..597797,597944..>598162))	Acanthamoeba castellanii str. Neff	14920950
ACA1_115170	mRNA	ACA1_115170	NW_004457554.1	598524	601055	D	ACA1_115170	join(<598524..598781,598860..599298,599389..599502,599669..599800,599899..600003,600164..600373,600506..600621,600705..>601055)	Acanthamoeba castellanii str. Neff	14920951
ACA1_115180	mRNA	ACA1_115180	NW_004457554.1	601191	601745	R	ACA1_115180	complement(<601191..>601745)	Acanthamoeba castellanii str. Neff	14920952
ACA1_115190	mRNA	ACA1_115190	NW_004457554.1	602054	602417	D	ACA1_115190	join(<602054..602190,602273..602288,602370..>602417)	Acanthamoeba castellanii str. Neff	14920953
ACA1_115200	mRNA	ACA1_115200	NW_004457554.1	602622	603886	D	ACA1_115200	join(<602622..602678,602772..602992,603105..603303,603470..>603886)	Acanthamoeba castellanii str. Neff	14920954
ACA1_115210	mRNA	ACA1_115210	NW_004457554.1	603939	604977	R	ACA1_115210	complement(join(<603939..604206,604273..604442,604526..604625,604691..>604977))	Acanthamoeba castellanii str. Neff	14920955
ACA1_115220	mRNA	ACA1_115220	NW_004457554.1	605337	606473	R	ACA1_115220	complement(join(<605337..605593,605696..605867,605930..606030,606140..>606473))	Acanthamoeba castellanii str. Neff	14920956
ACA1_115230	mRNA	ACA1_115230	NW_004457554.1	606852	610197	D	ACA1_115230	join(<606852..606973,607070..607258,607451..607601,607754..607934,608056..608193,608314..608411,608494..608655,608757..608897,609004..609062,609155..609331,609457..609578,609690..609787,609889..>610197)	Acanthamoeba castellanii str. Neff	14920957
ACA1_115240	mRNA	ACA1_115240	NW_004457554.1	610338	610789	D	ACA1_115240	join(<610338..610529,610645..>610789)	Acanthamoeba castellanii str. Neff	14920958
ACA1_115350	mRNA	ACA1_115350	NW_004457554.1	611493	612286	D	ACA1_115350	join(<611493..611684,611795..611939,612015..>612286)	Acanthamoeba castellanii str. Neff	14920959
ACA1_115360	mRNA	ACA1_115360	NW_004457554.1	613351	616075	R	ACA1_115360	complement(join(<613351..613510,613598..613999,614077..614392,614477..614738,614810..614890,614958..615206,615285..615420,615486..>616075))	Acanthamoeba castellanii str. Neff	14920960
ACA1_115370	mRNA	ACA1_115370	NW_004457554.1	616917	617567	D	ACA1_115370	join(<616917..616951,617019..617060,617121..617255,617471..>617567)	Acanthamoeba castellanii str. Neff	14920961
ACA1_115380	mRNA	ACA1_115380	NW_004457554.1	618198	620844	D	ACA1_115380	join(<618198..618368,618468..618747,618837..618899,618983..619152,619319..619519,619603..619776,619900..620119,620234..>620844)	Acanthamoeba castellanii str. Neff	14920962
ACA1_115390	mRNA	ACA1_115390	NW_004457554.1	620967	622716	R	ACA1_115390	complement(join(<620967..621055,621186..621288,621361..621496,621554..621722,621784..621875,621946..622098,622179..622286,622361..>622716))	Acanthamoeba castellanii str. Neff	14920963
ACA1_115400	mRNA	ACA1_115400	NW_004457554.1	623159	625422	D	ACA1_115400	join(<623159..623364,623441..623545,623632..623762,623898..623975,624095..624459,624589..624768,624843..624959,625078..>625422)	Acanthamoeba castellanii str. Neff	14920964
ACA1_115410	mRNA	ACA1_115410	NW_004457554.1	625613	629417	R	ACA1_115410	complement(join(<625613..625672,625804..625890,626175..626278,626428..626551,626652..626729,626842..626920,627043..627176,627319..627536,627656..627720,627797..627993,628144..628197,628303..628377,628395..628401,628578..628682,628779..628940,629042..629166,629247..>629417))	Acanthamoeba castellanii str. Neff	14920965
ACA1_115420	mRNA	ACA1_115420	NW_004457554.1	629707	630981	R	ACA1_115420	complement(join(<629707..630041,630148..630252,630350..630587,630784..>630981))	Acanthamoeba castellanii str. Neff	14920966
ACA1_115430	mRNA	ACA1_115430	NW_004457554.1	631201	634975	D	ACA1_115430	join(<631201..631338,631474..631599,631704..631976,632102..632152,632304..632497,632580..632678,632801..633068,633146..633287,633396..633532,633665..633763,633871..633949,634043..634143,634215..634451,634631..>634975)	Acanthamoeba castellanii str. Neff	14920967
ACA1_115540	mRNA	ACA1_115540	NW_004457554.1	635550	636432	D	ACA1_115540	join(<635550..635595,635665..635795,636013..>636432)	Acanthamoeba castellanii str. Neff	14920968
ACA1_115650	mRNA	ACA1_115650	NW_004457554.1	637061	637809	D	ACA1_115650	join(<637061..637106,637176..637320,637430..637681,637761..>637809)	Acanthamoeba castellanii str. Neff	14920969
ACA1_115660	mRNA	ACA1_115660	NW_004457554.1	637833	638400	R	ACA1_115660	complement(join(<637833..638186,638371..>638400))	Acanthamoeba castellanii str. Neff	14920970
ACA1_115670	mRNA	ACA1_115670	NW_004457554.1	638541	642558	R	ACA1_115670	complement(join(<638541..638761,638914..639228,639306..639437,639562..639664,639768..639902,640001..640266,640367..640432,640535..640655,640752..641059,641175..641337,641471..641537,641620..641681,641781..641879,641978..642067,642179..642336,642459..>642558))	Acanthamoeba castellanii str. Neff	14920971
ACA1_115680	mRNA	ACA1_115680	NW_004457554.1	643342	645136	R	ACA1_115680	complement(join(<643342..643402,643483..643613,643741..644004,644103..644153,644187..644303,644544..644623,644690..644795,644899..645000,645080..>645136))	Acanthamoeba castellanii str. Neff	14920972
ACA1_115690	mRNA	ACA1_115690	NW_004457554.1	646096	650825	D	ACA1_115690	join(<646096..646122,646155..646227,646311..646397,646473..646609,646732..646850,646954..647073,647156..647305,647433..647511,647657..647812,647883..648409,648558..648857,648931..649292,649400..649789,649854..650025,650134..650303,650397..650507,650575..>650825)	Acanthamoeba castellanii str. Neff	14920973
ACA1_115700	mRNA	ACA1_115700	NW_004457554.1	650938	652447	R	ACA1_115700	complement(join(<650938..651452,651551..651827,651932..652182,652297..>652447))	Acanthamoeba castellanii str. Neff	14920974
ACA1_115710	mRNA	ACA1_115710	NW_004457554.1	652595	654711	R	ACA1_115710	complement(join(<652595..652743,652835..652966,653056..653476,653589..653702,653802..654032,654120..654215,654357..654549,654659..>654711))	Acanthamoeba castellanii str. Neff	14920975
ACA1_115720	mRNA	ACA1_115720	NW_004457554.1	654943	656567	R	ACA1_115720	complement(join(<654943..655080,655141..655269,655394..655495,655580..655692,655816..655955,656058..656430,656534..>656567))	Acanthamoeba castellanii str. Neff	14920976
ACA1_115730	mRNA	ACA1_115730	NW_004457554.1	657043	658750	D	ACA1_115730	join(<657043..658119,658206..658358,658586..>658750)	Acanthamoeba castellanii str. Neff	14920977
ACA1_115740	mRNA	ACA1_115740	NW_004457554.1	658943	660611	D	ACA1_115740	join(<658943..658954,659064..659202,659327..659434,659534..659644,659759..659970,660039..660364,660461..>660611)	Acanthamoeba castellanii str. Neff	14920978
ACA1_115750	mRNA	ACA1_115750	NW_004457554.1	660702	661715	R	ACA1_115750	complement(join(<660702..660889,660968..661450,661547..>661715))	Acanthamoeba castellanii str. Neff	14920979
ACA1_115760	mRNA	ACA1_115760	NW_004457554.1	661756	662409	R	ACA1_115760	complement(join(<661756..661786,661928..662012,662151..>662409))	Acanthamoeba castellanii str. Neff	14920980
ACA1_115770	mRNA	ACA1_115770	NW_004457554.1	662517	665178	R	ACA1_115770	complement(join(<662517..662688,662793..662861,662955..663058,663128..663272,663380..663486,663591..663691,663774..663875,663981..664025,664103..664178,664243..664362,664458..664579,664764..>665178))	Acanthamoeba castellanii str. Neff	14920981
ACA1_115780	mRNA	ACA1_115780	NW_004457554.1	668874	670396	R	ACA1_115780	complement(join(<668874..669068,669417..669647,669804..669973,670222..>670396))	Acanthamoeba castellanii str. Neff	14920982
ACA1_115790	mRNA	ACA1_115790	NW_004457554.1	670776	673126	R	ACA1_115790	complement(join(<670776..670795,670818..670934,670993..671701,671766..671900,671984..>673126))	Acanthamoeba castellanii str. Neff	14920983
ACA1_115800	mRNA	ACA1_115800	NW_004457554.1	673404	674352	R	ACA1_115800	complement(join(<673404..673430,673502..673578,673652..673838,673899..674223,674282..>674352))	Acanthamoeba castellanii str. Neff	14920984
ACA1_115820	mRNA	ACA1_115820	NW_004457554.1	682553	683863	R	ACA1_115820	complement(join(<682553..682795,682910..683058,683165..683296,683492..683737,683803..>683863))	Acanthamoeba castellanii str. Neff	14920986
ACA1_115830	mRNA	ACA1_115830	NW_004457554.1	684230	686316	D	ACA1_115830	join(<684230..684383,684460..684533,684628..684729,684831..684979,685101..685197,685312..685431,685550..685783,685880..685962,686045..686129,686218..686268,686311..>686316)	Acanthamoeba castellanii str. Neff	14920987
ACA1_115840	mRNA	ACA1_115840	NW_004457554.1	686637	687352	R	ACA1_115840	complement(join(<686637..686702,686789..686993,687160..687236,687254..>687352))	Acanthamoeba castellanii str. Neff	14920988
ACA1_115850	mRNA	ACA1_115850	NW_004457554.1	687701	688256	R	ACA1_115850	complement(join(<687701..687823,687897..687997,688088..>688256))	Acanthamoeba castellanii str. Neff	14920989
ACA1_115860	mRNA	ACA1_115860	NW_004457554.1	688407	691849	R	ACA1_115860	complement(join(<688407..688502,688589..688700,688805..688960,689049..689277,689368..689500,689599..689753,689818..689868,689968..690303,690414..690605,690704..690804,690915..691051,691151..691216,691298..691508,691628..691746,691838..>691849))	Acanthamoeba castellanii str. Neff	14920990
ACA1_115870	mRNA	ACA1_115870	NW_004457554.1	692469	693875	R	ACA1_115870	complement(join(<692469..692719,692797..693157,693231..693337,693443..>693875))	Acanthamoeba castellanii str. Neff	14920991
ACA1_115880	mRNA	ACA1_115880	NW_004457554.1	694764	698508	D	ACA1_115880	join(<694764..695294,695512..695691,695780..696030,696138..696324,696409..697494,697563..697887,697958..>698508)	Acanthamoeba castellanii str. Neff	14920992
ACA1_115890	mRNA	ACA1_115890	NW_004457554.1	698886	702073	R	ACA1_115890	complement(join(<698886..698898,699009..699025,699168..699785,699889..699978,700120..700228,700341..700446,700559..700700,700919..701110,701202..701294,701378..>702073))	Acanthamoeba castellanii str. Neff	14920993
ACA1_116000	mRNA	ACA1_116000	NW_004457554.1	704194	704745	R	ACA1_116000	complement(<704194..>704745)	Acanthamoeba castellanii str. Neff	14920994
ACA1_116010	mRNA	ACA1_116010	NW_004457554.1	705635	706139	D	ACA1_116010	join(<705635..705967,705996..>706139)	Acanthamoeba castellanii str. Neff	14920995
ACA1_116020	mRNA	ACA1_116020	NW_004457554.1	706409	708571	D	ACA1_116020	join(<706409..706526,706636..706658,706737..706837,706934..707018,707121..707208,707282..707386,707483..707680,707782..707885,708193..708277,708366..>708571)	Acanthamoeba castellanii str. Neff	14920996
ACA1_116130	mRNA	ACA1_116130	NW_004457554.1	708755	709960	D	ACA1_116130	join(<708755..708868,709012..709138,709202..709254,709446..709541,709628..709732,709832..>709960)	Acanthamoeba castellanii str. Neff	14920997
ACA1_116140	mRNA	ACA1_116140	NW_004457554.1	710062	712378	D	ACA1_116140	join(<710062..710249,710365..710497,710592..710748,710854..711026,711134..711352,711421..711562,711673..711921,712029..712144,712259..>712378)	Acanthamoeba castellanii str. Neff	14920998
ACA1_116150	mRNA	ACA1_116150	NW_004457554.1	712410	712873	R	ACA1_116150	complement(join(<712410..712604,712688..>712873))	Acanthamoeba castellanii str. Neff	14920999
ACA1_116160	mRNA	ACA1_116160	NW_004457554.1	713145	714581	D	ACA1_116160	<713145..>714581	Acanthamoeba castellanii str. Neff	14921000
ACA1_116170	mRNA	ACA1_116170	NW_004457554.1	715152	718621	R	ACA1_116170	complement(join(<715152..715331,715413..716234,716374..716477,716583..716717,716800..716886,716973..717143,717208..717420,717571..717678,718086..718193,718306..718473,718570..>718621))	Acanthamoeba castellanii str. Neff	14921001
ACA1_116180	mRNA	ACA1_116180	NW_004457554.1	718807	720117	D	ACA1_116180	join(<718807..718831,718916..718997,719094..719221,719310..719498,719596..719791,720003..>720117)	Acanthamoeba castellanii str. Neff	14921002
ACA1_116190	mRNA	ACA1_116190	NW_004457554.1	719952	723768	R	ACA1_116190	complement(join(<719952..720156,720241..720386,720450..720764,720808..720993,721086..721198,721299..721428,721581..721670,721744..721816,721928..722057,722173..722289,722366..722919,722979..723397,723544..>723768))	Acanthamoeba castellanii str. Neff	14921003
ACA1_116200	mRNA	ACA1_116200	NW_004457554.1	723921	725945	D	ACA1_116200	join(<723921..724028,724111..724244,724320..724539,724645..724842,724920..725438,725520..>725945)	Acanthamoeba castellanii str. Neff	14921004
ACA1_116210	mRNA	ACA1_116210	NW_004457554.1	726036	727931	D	ACA1_116210	join(<726036..726526,726610..727100,727187..727308,727393..727579,727660..>727931)	Acanthamoeba castellanii str. Neff	14921005
ACA1_116220	mRNA	ACA1_116220	NW_004457554.1	728244	729083	D	ACA1_116220	<728244..>729083	Acanthamoeba castellanii str. Neff	14921006
ACA1_116230	mRNA	ACA1_116230	NW_004457554.1	729589	733129	D	ACA1_116230	join(<729589..730170,730243..730421,730514..730680,730784..730919,731024..731190,731269..731451,731543..731608,731677..731797,731868..731957,732045..732121,732225..732419,732499..732762,732834..>733129)	Acanthamoeba castellanii str. Neff	14921007
ACA1_116240	mRNA	ACA1_116240	NW_004457554.1	733537	735223	D	ACA1_116240	join(<733537..733772,733860..734528,734605..>735223)	Acanthamoeba castellanii str. Neff	14921008
ACA1_116250	mRNA	ACA1_116250	NW_004457554.1	735279	738699	R	ACA1_116250	complement(join(<735279..735402,735498..735592,735706..735757,735888..735995,736086..736159,736177..736237,736341..736402,736487..736956,737043..737640,737720..737822,737943..737995,738062..738202,738296..738409,738556..>738699))	Acanthamoeba castellanii str. Neff	14921009
ACA1_116260	mRNA	ACA1_116260	NW_004457554.1	738890	742858	R	ACA1_116260	complement(join(<738890..739232,739346..739608,739783..739965,740035..740220,740297..740401,740508..740643,740693..740781,740890..741235,741333..741428,741523..741671,741777..741843,741905..741969,742200..742268,742325..742413,742506..742620,742784..>742858))	Acanthamoeba castellanii str. Neff	14921010
ACA1_116270	mRNA	ACA1_116270	NW_004457554.1	743135	744741	D	ACA1_116270	join(<743135..743317,743443..743506,743572..743693,743794..743933,744009..744118,744230..744387,744498..744545,744628..>744741)	Acanthamoeba castellanii str. Neff	14921011
ACA1_116280	mRNA	ACA1_116280	NW_004457554.1	745025	747112	R	ACA1_116280	complement(join(<745025..745138,745226..745324,745391..745542,745610..745739,745827..745910,746011..746166,746252..746326,746506..746739,746821..746928,747026..>747112))	Acanthamoeba castellanii str. Neff	14921012
ACA1_116390	mRNA	ACA1_116390	NW_004457554.1	747315	749409	R	ACA1_116390	complement(join(<747315..748658,748733..748933,749033..749091,749233..749256,749301..>749409))	Acanthamoeba castellanii str. Neff	14921013
ACA1_116400	mRNA	ACA1_116400	NW_004457554.1	749729	750564	D	ACA1_116400	join(<749729..749848,750044..750144,750236..750362,750436..>750564)	Acanthamoeba castellanii str. Neff	14921014
ACA1_116410	mRNA	ACA1_116410	NW_004457554.1	750931	752337	D	ACA1_116410	join(<750931..750960,751257..751309,751323..>752337)	Acanthamoeba castellanii str. Neff	14921015
ACA1_116420	mRNA	ACA1_116420	NW_004457554.1	752536	753660	D	ACA1_116420	join(<752536..752629,752697..752800,752967..753026,753185..753414,753522..>753660)	Acanthamoeba castellanii str. Neff	14921016
ACA1_116430	mRNA	ACA1_116430	NW_004457554.1	755467	756538	D	ACA1_116430	join(<755467..755688,755775..755837,755907..755996,756077..756165,756244..>756538)	Acanthamoeba castellanii str. Neff	14921017
ACA1_116440	mRNA	ACA1_116440	NW_004457554.1	757461	758145	R	ACA1_116440	complement(join(<757461..757648,757722..>758145))	Acanthamoeba castellanii str. Neff	14921018
ACA1_116450	mRNA	ACA1_116450	NW_004457554.1	758314	759124	R	ACA1_116450	complement(join(<758314..758583,758681..758758,758840..>759124))	Acanthamoeba castellanii str. Neff	14921019
ACA1_116460	mRNA	ACA1_116460	NW_004457554.1	759252	759790	R	ACA1_116460	complement(join(<759252..759356,759459..759601,759667..>759790))	Acanthamoeba castellanii str. Neff	14921020
ACA1_116470	mRNA	ACA1_116470	NW_004457554.1	759971	761785	D	ACA1_116470	join(<759971..760133,760197..760380,760451..760509,760657..760774,760854..760979,761063..761283,761303..761543,761641..>761785)	Acanthamoeba castellanii str. Neff	14921021
ACA1_116480	mRNA	ACA1_116480	NW_004457554.1	761921	763399	D	ACA1_116480	join(<761921..761999,762068..762159,762232..762336,762399..762438,762716..762854,762931..763024,763091..763255,763333..763365,763379..>763399)	Acanthamoeba castellanii str. Neff	14921022
ACA1_116490	mRNA	ACA1_116490	NW_004457554.1	763595	764667	D	ACA1_116490	join(<763595..763645,763765..763848,763946..763980,764057..764185,764267..764409,764558..>764667)	Acanthamoeba castellanii str. Neff	14921023
ACA1_116500	mRNA	ACA1_116500	NW_004457554.1	764816	768266	R	ACA1_116500	complement(join(<764816..764919,764988..765099,765213..765484,765545..765761,765872..766022,766135..766229,766327..767697,767790..>768266))	Acanthamoeba castellanii str. Neff	14921024
ACA1_116510	mRNA	ACA1_116510	NW_004457554.1	768470	770935	D	ACA1_116510	join(<768470..768859,768959..769352,769433..769521,769615..769650,769728..769842,769926..770047,770122..770264,770343..770674,770787..>770935)	Acanthamoeba castellanii str. Neff	14921025
ACA1_116520	mRNA	ACA1_116520	NW_004457554.1	771156	771656	R	ACA1_116520	complement(join(<771156..771569,771636..>771656))	Acanthamoeba castellanii str. Neff	14921026
ACA1_116530	mRNA	ACA1_116530	NW_004457554.1	772688	773972	D	ACA1_116530	join(<772688..772867,772999..773155,773249..773431,773603..773706,773820..>773972)	Acanthamoeba castellanii str. Neff	14921027
ACA1_116540	mRNA	ACA1_116540	NW_004457554.1	774109	775073	R	ACA1_116540	complement(join(<774109..774906,775032..>775073))	Acanthamoeba castellanii str. Neff	14921028
ACA1_116550	mRNA	ACA1_116550	NW_004457554.1	775257	779730	R	ACA1_116550	complement(join(<775257..775340,775458..775588,775698..775821,775999..776085,776185..776292,776361..776518,776614..776677,776798..776927,777213..777353,777463..777628,777698..777887,777959..778030,778100..778218,778292..778375,778453..778567,778640..778712,778780..778886,778973..779049,779113..779278,779364..779438,779557..779643,779677..>779730))	Acanthamoeba castellanii str. Neff	14921029
ACA1_116560	mRNA	ACA1_116560	NW_004457554.1	779833	784082	R	ACA1_116560	complement(join(<779833..780372,780457..780806,780892..781018,781095..781207,781309..781449,781521..781587,781665..781738,781822..782725,782935..783080,783167..783262,783332..783979,784007..>784082))	Acanthamoeba castellanii str. Neff	14921030
ACA1_116580	mRNA	ACA1_116580	NW_004457554.1	790099	792491	R	ACA1_116580	complement(join(<790099..790178,790264..790350,790445..790628,790797..790951,791030..791147,791269..791450,791552..791665,791764..791878,792003..792118,792212..792272,792399..>792491))	Acanthamoeba castellanii str. Neff	14921032
ACA1_116590	mRNA	ACA1_116590	NW_004457554.1	792658	794905	R	ACA1_116590	complement(join(<792658..792985,793092..793936,794216..794320,794417..794480,794559..>794905))	Acanthamoeba castellanii str. Neff	14921033
ACA1_116600	mRNA	ACA1_116600	NW_004457554.1	795405	796193	D	ACA1_116600	join(<795405..795538,795622..795716,795784..795816,795936..796043,796111..>796193)	Acanthamoeba castellanii str. Neff	14921034
ACA1_116610	mRNA	ACA1_116610	NW_004457554.1	796385	809644	R	ACA1_116610	complement(join(<796385..796484,796575..796785,796882..798446,798519..798649,798721..800333,800349..803197,803270..806132,806218..807151,807220..807341,807417..808725,808833..809148,809216..809325,809408..809494,809582..>809644))	Acanthamoeba castellanii str. Neff	14921035
ACA1_116620	mRNA	ACA1_116620	NW_004457554.1	810255	814157	D	ACA1_116620	join(<810255..810430,810570..810659,810766..810984,811090..811114,811235..811394,811461..811546,811566..811757,811823..811930,811998..812136,812217..812355,812416..812620,812694..>814157)	Acanthamoeba castellanii str. Neff	14921036
ACA1_116630	mRNA	ACA1_116630	NW_004457554.1	814424	816509	D	ACA1_116630	join(<814424..814537,814649..814768,814869..814979,815059..815117,815239..815365,815494..815580,815660..815788,815896..815983,816059..816114,816205..816307,816385..>816509)	Acanthamoeba castellanii str. Neff	14921037
ACA1_116640	mRNA	ACA1_116640	NW_004457554.1	816583	817394	R	ACA1_116640	complement(join(<816583..816976,816991..>817394))	Acanthamoeba castellanii str. Neff	14921038
ACA1_116650	mRNA	ACA1_116650	NW_004457554.1	817939	818486	D	ACA1_116650	join(<817939..818063,818139..818267,818366..>818486)	Acanthamoeba castellanii str. Neff	14921039
ACA1_116660	mRNA	ACA1_116660	NW_004457554.1	818586	825007	R	ACA1_116660	complement(join(<818586..819455,819544..819648,819735..819797,819876..820060,820120..820238,820317..820384,820479..820772,821048..821153,821231..821322,821606..821675,821812..821875,821982..822079,822170..822288,822367..822617,822722..822791,822880..822929,823014..823148,823220..823444,823542..823617,823690..823809,823916..824056,824156..824277,824353..824719,824771..>825007))	Acanthamoeba castellanii str. Neff	14921040
ACA1_116670	mRNA	ACA1_116670	NW_004457554.1	825210	826316	R	ACA1_116670	complement(join(<825210..825588,825749..825946,825966..826010,826081..>826316))	Acanthamoeba castellanii str. Neff	14921041
ACA1_116680	mRNA	ACA1_116680	NW_004457554.1	826817	827688	R	ACA1_116680	complement(join(<826817..826865,826925..826974,827050..827230,827341..827395,827477..827583,827642..>827688))	Acanthamoeba castellanii str. Neff	14921042
ACA1_116690	mRNA	ACA1_116690	NW_004457554.1	827968	829472	D	ACA1_116690	join(<827968..828096,828212..828287,828416..828582,828668..828827,828919..829173,829261..>829472)	Acanthamoeba castellanii str. Neff	14921043
ACA1_116700	mRNA	ACA1_116700	NW_004457554.1	829571	830364	R	ACA1_116700	complement(join(<829571..829619,829698..829873,829996..830051,830131..830229,830319..>830364))	Acanthamoeba castellanii str. Neff	14921044
ACA1_116710	mRNA	ACA1_116710	NW_004457554.1	830740	832863	R	ACA1_116710	complement(join(<830740..830863,831009..831171,831282..831416,831536..831584,831882..831962,832178..832333,832451..832577,832703..>832863))	Acanthamoeba castellanii str. Neff	14921045
ACA1_116720	mRNA	ACA1_116720	NW_004457554.1	833204	834832	D	ACA1_116720	join(<833204..833341,833414..833488,833552..833657,833740..833850,833942..834015,834097..834209,834296..834467,834554..>834832)	Acanthamoeba castellanii str. Neff	14921046
ACA1_116730	mRNA	ACA1_116730	NW_004457554.1	835369	838222	D	ACA1_116730	join(<835369..836500,836623..836705,836803..837150,837236..837421,837511..837568,837645..837774,837855..837932,838018..>838222)	Acanthamoeba castellanii str. Neff	14921047
ACA1_116740	mRNA	ACA1_116740	NW_004457554.1	838497	840487	D	ACA1_116740	join(<838497..838674,838758..838858,838947..839044,839134..839211,839289..839406,839490..839568,839638..839696,839777..839936,840023..840166,840255..>840487)	Acanthamoeba castellanii str. Neff	14921048
ACA1_116750	mRNA	ACA1_116750	NW_004457554.1	840606	841723	D	ACA1_116750	join(<840606..840644,840735..841040,841140..841294,841427..841529,841619..>841723)	Acanthamoeba castellanii str. Neff	14921049
ACA1_116760	mRNA	ACA1_116760	NW_004457554.1	842024	843071	D	ACA1_116760	join(<842024..842288,842428..842665,842762..>843071)	Acanthamoeba castellanii str. Neff	14921050
ACA1_116770	mRNA	ACA1_116770	NW_004457554.1	843173	844773	R	ACA1_116770	complement(join(<843173..843300,843388..843470,843597..843661,843788..843891,843968..844106,844185..844262,844407..844519,844632..>844773))	Acanthamoeba castellanii str. Neff	14921051
ACA1_116780	mRNA	ACA1_116780	NW_004457554.1	845457	848985	D	ACA1_116780	join(<845457..845525,845602..846044,846132..846381,846487..846864,846977..848026,848109..848216,848328..848408,848535..848747,848854..>848985)	Acanthamoeba castellanii str. Neff	14921052
ACA1_116790	mRNA	ACA1_116790	NW_004457554.1	849053	851496	R	ACA1_116790	complement(join(<849053..849282,849380..849720,849815..850008,850123..850250,850417..850474,850541..850669,850820..850942,851068..851144,851295..>851496))	Acanthamoeba castellanii str. Neff	14921053
ACA1_116800	mRNA	ACA1_116800	NW_004457554.1	851695	852642	R	ACA1_116800	complement(join(<851695..851703,851825..852002,852139..852298,852421..852436,852469..>852642))	Acanthamoeba castellanii str. Neff	14921054
ACA1_116810	mRNA	ACA1_116810	NW_004457554.1	853367	854584	D	ACA1_116810	join(<853367..853424,853512..853594,853676..853692,853779..853837,853931..854060,854114..854145,854213..854318,854536..>854584)	Acanthamoeba castellanii str. Neff	14921055
ACA1_116820	mRNA	ACA1_116820	NW_004457554.1	854647	855915	D	ACA1_116820	join(<854647..854791,854859..855052,855156..855295,855396..855507,855616..>855915)	Acanthamoeba castellanii str. Neff	14921056
ACA1_116840	mRNA	ACA1_116840	NW_004457554.1	856656	857502	D	ACA1_116840	join(<856656..856962,857109..857222,857290..857330,857383..>857502)	Acanthamoeba castellanii str. Neff	14921058
ACA1_116850	mRNA	ACA1_116850	NW_004457554.1	857651	861383	D	ACA1_116850	join(<857651..857749,857847..858278,858390..858576,858652..858688,858731..858793,858878..859026,859103..859490,859592..859712,859817..859879,859977..860166,860270..860341,860415..860680,860714..861119,861214..>861383)	Acanthamoeba castellanii str. Neff	14921059
ACA1_116860	mRNA	ACA1_116860	NW_004457554.1	861898	863225	D	ACA1_116860	join(<861898..862139,862232..>863225)	Acanthamoeba castellanii str. Neff	14921060
ACA1_116870	mRNA	ACA1_116870	NW_004457554.1	863438	865554	R	ACA1_116870	complement(join(<863438..863469,863561..863686,863781..863881,863963..864029,864112..864180,864265..864386,864458..864545,864646..864732,864857..864947,865029..865182,865276..865322,865402..>865554))	Acanthamoeba castellanii str. Neff	14921061
ACA1_116880	mRNA	ACA1_116880	NW_004457554.1	866209	866927	D	ACA1_116880	join(<866209..866443,866506..866580,866713..>866927)	Acanthamoeba castellanii str. Neff	14921062
ACA1_116890	mRNA	ACA1_116890	NW_004457554.1	866947	867611	R	ACA1_116890	complement(join(<866947..867087,867130..867217,867301..867360,867445..>867611))	Acanthamoeba castellanii str. Neff	14921063
ACA1_116900	mRNA	ACA1_116900	NW_004457554.1	867938	869249	D	ACA1_116900	join(<867938..868250,868348..868435,868546..868624,868737..868835,868952..869134,869190..>869249)	Acanthamoeba castellanii str. Neff	14921064
ACA1_116910	mRNA	ACA1_116910	NW_004457554.1	869608	872764	D	ACA1_116910	join(<869608..869668,869775..870107,870211..870263,870428..870499,870625..870692,870772..870858,870961..871074,871153..871265,871363..871423,871564..871624,871718..871823,871907..872263,872365..872613,872724..>872764)	Acanthamoeba castellanii str. Neff	14921065
ACA1_116920	mRNA	ACA1_116920	NW_004457554.1	873084	874597	R	ACA1_116920	complement(join(<873084..873203,873260..873458,873570..873673,873764..873842,874008..>874597))	Acanthamoeba castellanii str. Neff	14921066
ACA1_116930	mRNA	ACA1_116930	NW_004457554.1	875320	876144	D	ACA1_116930	<875320..>876144	Acanthamoeba castellanii str. Neff	14921067
ACA1_116940	mRNA	ACA1_116940	NW_004457554.1	876593	878145	D	ACA1_116940	join(<876593..877073,877205..877318,877405..877488,877588..877795,877875..>878145)	Acanthamoeba castellanii str. Neff	14921068
ACA1_116950	mRNA	ACA1_116950	NW_004457554.1	880463	882349	D	ACA1_116950	<880463..>882349	Acanthamoeba castellanii str. Neff	14921069
ACA1_116960	mRNA	ACA1_116960	NW_004457554.1	882435	883125	D	ACA1_116960	join(<882435..882551,882644..882717,882795..882847,882998..>883125)	Acanthamoeba castellanii str. Neff	14921070
ACA1_116970	mRNA	ACA1_116970	NW_004457554.1	883270	884409	D	ACA1_116970	join(<883270..883545,883698..883789,883869..883947,884040..884099,884203..>884409)	Acanthamoeba castellanii str. Neff	14921071
ACA1_116980	mRNA	ACA1_116980	NW_004457554.1	884771	885140	D	ACA1_116980	join(<884771..884872,884938..885010,885088..>885140)	Acanthamoeba castellanii str. Neff	14921072
ACA1_116990	mRNA	ACA1_116990	NW_004457554.1	885304	887721	D	ACA1_116990	join(<885304..885438,885526..885639,885732..885859,885974..886068,886157..886289,886365..886478,886532..886756,886862..886931,887011..887170,887245..887326,887444..887537,887602..>887721)	Acanthamoeba castellanii str. Neff	14921073
ACA1_117000	mRNA	ACA1_117000	NW_004457554.1	888773	890628	D	ACA1_117000	join(<888773..889558,889622..890017,890114..890228,890312..>890628)	Acanthamoeba castellanii str. Neff	14921074
ACA1_117010	mRNA	ACA1_117010	NW_004457554.1	891199	891915	D	ACA1_117010	join(<891199..891271,891470..>891915)	Acanthamoeba castellanii str. Neff	14921075
ACA1_117020	mRNA	ACA1_117020	NW_004457554.1	892085	894369	D	ACA1_117020	join(<892085..892201,892292..892408,892543..892765,892860..892992,893072..893185,893264..893437,893506..893575,893669..893810,893896..893977,894082..894175,894253..>894369)	Acanthamoeba castellanii str. Neff	14921076
ACA1_117030	mRNA	ACA1_117030	NW_004457554.1	895458	896354	D	ACA1_117030	join(<895458..895944,896092..>896354)	Acanthamoeba castellanii str. Neff	14921077
ACA1_117040	mRNA	ACA1_117040	NW_004457554.1	896851	898880	D	ACA1_117040	join(<896851..896942,897049..897130,897250..897312,897495..897617,897780..897882,897985..898088,898202..898301,898387..898460,898573..898726,898810..>898880)	Acanthamoeba castellanii str. Neff	14921078
ACA1_117050	mRNA	ACA1_117050	NW_004457554.1	899178	900230	R	ACA1_117050	complement(join(<899178..899970,900061..>900230))	Acanthamoeba castellanii str. Neff	14921079
ACA1_117060	mRNA	ACA1_117060	NW_004457554.1	900741	904118	D	ACA1_117060	join(<900741..901130,901250..901353,901434..901500,901588..901675,901800..901968,902098..902229,902371..902423,902640..902777,902896..903039,903156..903341,903438..903515,903598..>904118)	Acanthamoeba castellanii str. Neff	14921080
ACA1_117070	mRNA	ACA1_117070	NW_004457554.1	904477	907415	R	ACA1_117070	complement(join(<904477..904670,904757..904786,904907..905326,905359..905556,905736..905824,905906..905975,906055..906160,906294..906406,906498..906596,906683..906917,906981..907114,907277..>907415))	Acanthamoeba castellanii str. Neff	14921081
ACA1_117080	mRNA	ACA1_117080	NW_004457554.1	907777	910878	D	ACA1_117080	join(<907777..908378,908453..908515,908659..908762,908860..908980,909208..909353,909428..909556,909676..909747,909822..909978,910066..910163,910249..910415,910490..910613,910706..>910878)	Acanthamoeba castellanii str. Neff	14921082
ACA1_117090	mRNA	ACA1_117090	NW_004457554.1	911094	914635	R	ACA1_117090	complement(join(<911094..911278,911299..911365,911453..911691,911807..911907,911991..912535,912631..912756,912830..912919,912990..913189,913274..913402,913490..913567,913852..913989,914155..>914635))	Acanthamoeba castellanii str. Neff	14921083
ACA1_117100	mRNA	ACA1_117100	NW_004457554.1	915091	918099	D	ACA1_117100	join(<915091..915259,915463..915575,915655..915668,915725..915849,915929..916058,916148..916176,916265..916399,916496..916748,916854..917178,917554..917769,917852..917939,918014..>918099)	Acanthamoeba castellanii str. Neff	14921084
ACA1_117110	mRNA	ACA1_117110	NW_004457554.1	918597	920331	R	ACA1_117110	complement(join(<918597..919022,919104..919216,919293..919425,919579..919818,919905..919968,920082..920188,920281..>920331))	Acanthamoeba castellanii str. Neff	14921085
ACA1_117120	mRNA	ACA1_117120	NW_004457554.1	920429	920894	R	ACA1_117120	complement(join(<920429..920449,920604..>920894))	Acanthamoeba castellanii str. Neff	14921086
ACA1_117130	mRNA	ACA1_117130	NW_004457554.1	921505	923008	D	ACA1_117130	join(<921505..921916,922028..922265,922355..922442,922519..922596,922677..922807,922894..>923008)	Acanthamoeba castellanii str. Neff	14921087
ACA1_117140	mRNA	ACA1_117140	NW_004457554.1	923796	926923	D	ACA1_117140	join(<923796..923852,923919..923999,924110..924278,924351..924496,924569..924684,924759..924904,925012..925131,925210..925298,925394..925834,925904..>926923)	Acanthamoeba castellanii str. Neff	14921088
ACA1_117150	mRNA	ACA1_117150	NW_004457554.1	927120	927700	D	ACA1_117150	join(<927120..927228,927315..927446,927552..>927700)	Acanthamoeba castellanii str. Neff	14921089
ACA1_117160	mRNA	ACA1_117160	NW_004457554.1	927847	930726	R	ACA1_117160	complement(join(<927847..927954,928040..928099,928185..928266,928390..928455,928553..928685,928738..928851,928920..928947,929117..929207,929240..929406,929478..929577,929665..929916,930017..930139,930208..930298,930364..930418,930484..>930726))	Acanthamoeba castellanii str. Neff	14921090
ACA1_117170	mRNA	ACA1_117170	NW_004457554.1	930888	933754	R	ACA1_117170	complement(join(<930888..931215,931400..931473,931540..931599,931671..931772,931888..932205,932287..932360,932435..932534,932645..932689,932763..932873,932974..933120,933189..933287,933386..933421,933511..933584,933694..>933754))	Acanthamoeba castellanii str. Neff	14921091
ACA1_117180	mRNA	ACA1_117180	NW_004457554.1	934208	940519	R	ACA1_117180	complement(join(<934208..934400,934467..934547,934609..934939,935020..935228,935350..935560,935630..935879,935936..936113,936194..936410,936491..936744,936821..937220,937300..937546,937622..937923,938004..938223,938293..938525,938547..938728,938801..938941,939014..939563,939634..939874,939947..939989,940072..940390,940456..>940519))	Acanthamoeba castellanii str. Neff	14921092
ACA1_117190	mRNA	ACA1_117190	NW_004457554.1	940672	942545	R	ACA1_117190	complement(join(<940672..941319,941347..941578,941603..942330,942396..>942545))	Acanthamoeba castellanii str. Neff	14921093
ACA1_117200	mRNA	ACA1_117200	NW_004457554.1	943270	948615	R	ACA1_117200	complement(join(<943270..943536,943554..943777,943878..943939,944028..944280,944304..944359,944456..944681,944769..944827,944898..945126,945209..945615,945698..945920,945974..946029,946129..946357,946453..946508,946587..946815,946884..946939,947035..947269,947343..947398,947462..947684,947762..947799,947917..948010,948157..948388,948412..948534,948610..>948615))	Acanthamoeba castellanii str. Neff	14921094
ACA1_117210	mRNA	ACA1_117210	NW_004457554.1	949885	951560	D	ACA1_117210	join(<949885..950546,950687..950759,950839..950904,950973..951067,951151..951238,951321..>951560)	Acanthamoeba castellanii str. Neff	14921095
ACA1_117220	mRNA	ACA1_117220	NW_004457554.1	951789	953018	D	ACA1_117220	join(<951789..951825,951898..951921,952058..952151,952235..952353,952423..952493,952586..952718,952810..>953018)	Acanthamoeba castellanii str. Neff	14921096
ACA1_117230	mRNA	ACA1_117230	NW_004457554.1	953066	954326	R	ACA1_117230	complement(join(<953066..953244,953316..953459,953527..953702,953773..>954326))	Acanthamoeba castellanii str. Neff	14921097
ACA1_117240	mRNA	ACA1_117240	NW_004457554.1	954563	961694	R	ACA1_117240	complement(join(<954563..954679,954753..954856,954933..954994,955069..955117,955213..955324,955397..955518,955631..955762,955802..955910,956009..956018,956133..956219,956302..956516,956624..956730,956817..956900,957013..957478,957834..957920,958002..958139,958259..958378,958485..958561,958640..958739,958834..958935,959008..959145,959221..959269,959343..959409,959486..959629,959705..959883,959984..960080,960184..960243,960320..960417,960497..960690,960775..960903,960997..961028,961123..961243,961342..961418,961610..>961694))	Acanthamoeba castellanii str. Neff	14921098
ACA1_117250	mRNA	ACA1_117250	NW_004457554.1	962020	963282	D	ACA1_117250	join(<962020..962048,962163..962442,962508..962634,962711..962820,962912..963069,963159..>963282)	Acanthamoeba castellanii str. Neff	14921099
ACA1_117260	mRNA	ACA1_117260	NW_004457554.1	963446	965026	D	ACA1_117260	join(<963446..963626,963728..963840,963923..964076,964148..964249,964310..964387,964460..964542,964616..964811,964902..>965026)	Acanthamoeba castellanii str. Neff	14921100
ACA1_117270	mRNA	ACA1_117270	NW_004457554.1	965499	967666	D	ACA1_117270	join(<965499..966593,966670..966766,966850..966954,967043..967092,967190..>967666)	Acanthamoeba castellanii str. Neff	14921101
ACA1_117280	mRNA	ACA1_117280	NW_004457554.1	967738	968495	R	ACA1_117280	complement(join(<967738..968321,968402..>968495))	Acanthamoeba castellanii str. Neff	14921102
ACA1_117290	mRNA	ACA1_117290	NW_004457554.1	968951	971174	D	ACA1_117290	join(<968951..969711,969776..970356,970441..970567,970649..970890,970966..>971174)	Acanthamoeba castellanii str. Neff	14921103
ACA1_117300	mRNA	ACA1_117300	NW_004457554.1	971405	972136	R	ACA1_117300	complement(join(<971405..971474,971569..971702,971768..971884,971960..>972136))	Acanthamoeba castellanii str. Neff	14921104
ACA1_117310	mRNA	ACA1_117310	NW_004457554.1	972305	973484	D	ACA1_117310	join(<972305..972499,972591..972852,972914..972951,973025..973145,973211..973328,973403..>973484)	Acanthamoeba castellanii str. Neff	14921105
ACA1_117320	mRNA	ACA1_117320	NW_004457554.1	973575	976467	R	ACA1_117320	complement(join(<973575..973716,973793..973879,973967..974148,974222..974584,974668..974825,974899..975026,975095..975172,975260..975536,975602..975697,975774..975882,975969..976028,976107..976186,976275..>976467))	Acanthamoeba castellanii str. Neff	14921106
ACA1_117330	mRNA	ACA1_117330	NW_004457554.1	976797	979152	D	ACA1_117330	join(<976797..977184,977313..977557,977662..978175,978288..978414,978486..>979152)	Acanthamoeba castellanii str. Neff	14921107
ACA1_117350	mRNA	ACA1_117350	NW_004457554.1	983118	984577	D	ACA1_117350	join(<983118..983227,983332..983651,983790..983860,984032..984451,984497..>984577)	Acanthamoeba castellanii str. Neff	14921109
ACA1_006680	mRNA	ACA1_006680	NW_004457552.1	350	1016	D	ACA1_006680	join(<350..496,626..815,886..>1016)	Acanthamoeba castellanii str. Neff	14920734
ACA1_006790	mRNA	ACA1_006790	NW_004457552.1	3125	4304	D	ACA1_006790	join(<3125..3215,3287..3439,3841..3935,4092..>4304)	Acanthamoeba castellanii str. Neff	14920733
ACA1_007000	mRNA	ACA1_007000	NW_004457552.1	7032	8371	D	ACA1_007000	join(<7032..7161,7246..7291,7406..7523,7628..7719,7836..8163,8237..>8371)	Acanthamoeba castellanii str. Neff	14920731
ACA1_007010	mRNA	ACA1_007010	NW_004457552.1	8983	11092	D	ACA1_007010	join(<8983..9001,9080..9399,9470..9571,9662..9782,9870..10057,10121..>11092)	Acanthamoeba castellanii str. Neff	14920732
ACA1_049530	mRNA	ACA1_049530	NW_004457549.1	777	1384	R	ACA1_049530	complement(join(<777..849,1001..1218,1286..>1384))	Acanthamoeba castellanii str. Neff	14920730
ACA1_049640	mRNA	ACA1_049640	NW_004457549.1	2966	3859	R	ACA1_049640	complement(<2966..>3859)	Acanthamoeba castellanii str. Neff	14920691
ACA1_049750	mRNA	ACA1_049750	NW_004457549.1	7072	7494	R	ACA1_049750	complement(join(<7072..7216,7346..>7494))	Acanthamoeba castellanii str. Neff	14920692
ACA1_049760	mRNA	ACA1_049760	NW_004457549.1	8417	10005	R	ACA1_049760	complement(join(<8417..8555,9224..9614,9696..>10005))	Acanthamoeba castellanii str. Neff	14920693
ACA1_049990	mRNA	ACA1_049990	NW_004457549.1	22784	25150	D	ACA1_049990	join(<22784..22933,23043..23249,23343..23470,23581..23814,23907..23971,24079..24465,24683..24824,24955..>25150)	Acanthamoeba castellanii str. Neff	14920696
ACA1_050000	mRNA	ACA1_050000	NW_004457549.1	25237	27554	R	ACA1_050000	complement(join(<25237..25504,25588..25646,25714..25842,25957..26100,26208..26309,26413..26548,26672..27309,27477..>27554))	Acanthamoeba castellanii str. Neff	14920697
ACA1_050010	mRNA	ACA1_050010	NW_004457549.1	27732	30148	D	ACA1_050010	join(<27732..28061,28240..28317,28824..28967,29076..29182,29269..29408,29525..29647,29742..>30148)	Acanthamoeba castellanii str. Neff	14920698
ACA1_050120	mRNA	ACA1_050120	NW_004457549.1	32522	35436	D	ACA1_050120	join(<32522..32691,32841..32938,33069..33176,33250..33380,33574..33739,33813..33902,34108..34395,34495..34586,34707..34881,34976..>35436)	Acanthamoeba castellanii str. Neff	14920699
ACA1_050130	mRNA	ACA1_050130	NW_004457549.1	35909	37718	D	ACA1_050130	join(<35909..35954,36051..36148,36217..36329,36471..36705,36760..36942,37149..37208,37354..37416,37482..37537,37646..>37718)	Acanthamoeba castellanii str. Neff	14920700
ACA1_050140	mRNA	ACA1_050140	NW_004457549.1	37807	41216	R	ACA1_050140	complement(join(<37807..37955,38038..38208,38303..38428,38536..38600,38674..38725,38805..38865,39087..39209,39280..39429,39502..39599,39685..39837,39981..40048,40131..40276,40386..40509,40628..40687,40753..40891,41012..>41216))	Acanthamoeba castellanii str. Neff	14920701
ACA1_050150	mRNA	ACA1_050150	NW_004457549.1	41699	42756	D	ACA1_050150	join(<41699..41769,41841..41937,42003..42070,42159..42274,42333..42556,42628..>42756)	Acanthamoeba castellanii str. Neff	14920702
ACA1_050170	mRNA	ACA1_050170	NW_004457549.1	47237	47672	R	ACA1_050170	complement(join(<47237..47416,47547..>47672))	Acanthamoeba castellanii str. Neff	14920704
ACA1_050180	mRNA	ACA1_050180	NW_004457549.1	48237	49984	D	ACA1_050180	join(<48237..48294,48368..48448,48550..48628,48715..48820,48940..49070,49159..49328,49602..49759,49841..>49984)	Acanthamoeba castellanii str. Neff	14920705
ACA1_050190	mRNA	ACA1_050190	NW_004457549.1	50635	52188	R	ACA1_050190	complement(join(<50635..50798,50882..50991,51100..51420,51547..51705,51784..51890,52021..>52188))	Acanthamoeba castellanii str. Neff	14920706
ACA1_050200	mRNA	ACA1_050200	NW_004457549.1	53339	55126	D	ACA1_050200	join(<53339..53420,53519..53649,53737..53819,53917..54124,54190..54318,54387..54470,54560..54739,54831..54929,55016..>55126)	Acanthamoeba castellanii str. Neff	14920707
ACA1_050210	mRNA	ACA1_050210	NW_004457549.1	55413	57722	D	ACA1_050210	join(<55413..55467,55571..55657,55754..55795,55978..56050,56147..56242,56333..56391,56494..56519,56814..56882,56964..57275,57349..57403,57471..57573,57659..>57722)	Acanthamoeba castellanii str. Neff	14920708
ACA1_050220	mRNA	ACA1_050220	NW_004457549.1	59596	61254	R	ACA1_050220	complement(join(<59596..60011,60173..60292,60414..60467,60551..60683,60807..60835,61032..>61254))	Acanthamoeba castellanii str. Neff	14920709
ACA1_050330	mRNA	ACA1_050330	NW_004457549.1	62355	66932	R	ACA1_050330	complement(join(<62355..62366,62441..62627,62738..62827,62925..63021,63084..63178,63244..64634,64718..66097,66213..>66932))	Acanthamoeba castellanii str. Neff	14920710
ACA1_050340	mRNA	ACA1_050340	NW_004457549.1	68009	72183	R	ACA1_050340	complement(join(<68009..68193,68255..68371,68447..68520,68593..69008,69090..69173,69249..69332,69410..69471,69538..69890,70010..>72183))	Acanthamoeba castellanii str. Neff	14920711
ACA1_050350	mRNA	ACA1_050350	NW_004457549.1	73346	76407	R	ACA1_050350	complement(join(<73346..73483,73643..73779,73853..73919,73998..74120,74184..74225,74248..74254,74350..74453,74659..74860,74946..75093,75179..75277,75357..75485,75573..75668,75776..75891,76006..76082,76186..>76407))	Acanthamoeba castellanii str. Neff	14920712
ACA1_050360	mRNA	ACA1_050360	NW_004457549.1	76812	78888	R	ACA1_050360	complement(join(<76812..77208,77299..77425,77522..77612,77682..77810,77944..77953,78032..78067,78180..78236,78299..78405,78511..78586,78662..>78888))	Acanthamoeba castellanii str. Neff	14920713
ACA1_050370	mRNA	ACA1_050370	NW_004457549.1	79305	82103	D	ACA1_050370	join(<79305..79319,79525..79968,80090..80251,80332..80428,80506..80595,80678..80706,80824..80854,80931..81049,81126..81248,81346..81451,81538..81570,81681..81757,81837..81891,81979..>82103)	Acanthamoeba castellanii str. Neff	14920714
ACA1_050380	mRNA	ACA1_050380	NW_004457549.1	83204	84877	D	ACA1_050380	join(<83204..83402,83482..83705,83790..84330,84414..>84877)	Acanthamoeba castellanii str. Neff	14920715
ACA1_050390	mRNA	ACA1_050390	NW_004457549.1	84847	85635	R	ACA1_050390	complement(join(<84847..84870,84939..85025,85115..85233,85341..>85635))	Acanthamoeba castellanii str. Neff	14920716
ACA1_050400	mRNA	ACA1_050400	NW_004457549.1	85931	86636	D	ACA1_050400	join(<85931..86032,86101..86277,86352..86493,86569..>86636)	Acanthamoeba castellanii str. Neff	14920717
ACA1_050410	mRNA	ACA1_050410	NW_004457549.1	87175	87802	D	ACA1_050410	join(<87175..87282,87342..87406,87472..87575,87645..>87802)	Acanthamoeba castellanii str. Neff	14920718
ACA1_050420	mRNA	ACA1_050420	NW_004457549.1	87848	88662	D	ACA1_050420	join(<87848..88373,88433..>88662)	Acanthamoeba castellanii str. Neff	14920719
ACA1_050430	mRNA	ACA1_050430	NW_004457549.1	88736	90107	R	ACA1_050430	complement(join(<88736..89203,89267..89482,89583..89678,89779..89966,90062..>90107))	Acanthamoeba castellanii str. Neff	14920720
ACA1_050440	mRNA	ACA1_050440	NW_004457549.1	90501	91563	R	ACA1_050440	complement(join(<90501..90695,90817..90929,91047..>91563))	Acanthamoeba castellanii str. Neff	14920721
ACA1_050450	mRNA	ACA1_050450	NW_004457549.1	91706	92327	D	ACA1_050450	join(<91706..91754,91839..91877,91991..92143,92218..>92327)	Acanthamoeba castellanii str. Neff	14920722
ACA1_050460	mRNA	ACA1_050460	NW_004457549.1	92479	94594	D	ACA1_050460	join(<92479..92558,92675..92715,92813..92915,93049..93266,93420..93578,93663..93737,93832..93978,94065..94172,94244..94321,94401..>94594)	Acanthamoeba castellanii str. Neff	14920723
ACA1_050470	mRNA	ACA1_050470	NW_004457549.1	94775	97068	D	ACA1_050470	join(<94775..95314,95347..95488,95553..95652,95723..96445,96543..>97068)	Acanthamoeba castellanii str. Neff	14920724
ACA1_050480	mRNA	ACA1_050480	NW_004457549.1	97350	105047	D	ACA1_050480	join(<97350..97474,97538..97624,97760..99515,99585..100733,100848..104562,104653..>105047)	Acanthamoeba castellanii str. Neff	14920725
ACA1_050490	mRNA	ACA1_050490	NW_004457549.1	105203	106263	R	ACA1_050490	complement(join(<105203..105307,105379..105513,105591..105684,105748..105818,105899..105969,106052..106120,106197..>106263))	Acanthamoeba castellanii str. Neff	14920726
ACA1_050500	mRNA	ACA1_050500	NW_004457549.1	106649	108272	R	ACA1_050500	complement(join(<106649..106972,107046..107134,107196..107314,107386..107672,107749..107817,107882..108080,108175..>108272))	Acanthamoeba castellanii str. Neff	14920727
ACA1_050510	mRNA	ACA1_050510	NW_004457549.1	109122	109979	D	ACA1_050510	join(<109122..109193,109262..109363,109438..109512,109599..109705,109775..>109979)	Acanthamoeba castellanii str. Neff	14920728
ACA1_050520	mRNA	ACA1_050520	NW_004457549.1	110225	112573	D	ACA1_050520	join(<110225..110291,110372..110485,110620..110713,110823..111018,111083..111158,111230..111255,111363..111522,111610..111696,111781..111879,111961..112116,112233..112323,112463..112479,112515..>112573)	Acanthamoeba castellanii str. Neff	14920729
ACA1_009160	mRNA	ACA1_009160	NW_004457547.1	50	818	D	ACA1_009160	join(<50..502,621..>818)	Acanthamoeba castellanii str. Neff	14920690
ACA1_009170	mRNA	ACA1_009170	NW_004457547.1	1141	4219	D	ACA1_009170	join(<1141..1243,1467..1566,1669..1717,1867..2010,2163..2471,2538..2851,2963..3321,3408..3480,3545..3737,3881..3958,4028..>4219)	Acanthamoeba castellanii str. Neff	14920689
ACA1_009280	mRNA	ACA1_009280	NW_004457547.1	5424	5740	D	ACA1_009280	join(<5424..5612,5635..5699,5725..>5740)	Acanthamoeba castellanii str. Neff	14920688
ACA1_133110	mRNA	ACA1_133110	NW_004457545.1	173	301	D	ACA1_133110	<173..>301	Acanthamoeba castellanii str. Neff	14920687
ACA1_133120	mRNA	ACA1_133120	NW_004457545.1	2016	3478	R	ACA1_133120	complement(join(<2016..2183,2283..2423,2496..2642,2734..2816,2921..2967,3037..3079,3148..3179,3363..>3478))	Acanthamoeba castellanii str. Neff	14920649
ACA1_133130	mRNA	ACA1_133130	NW_004457545.1	5146	6724	D	ACA1_133130	join(<5146..5306,5641..6566,6699..>6724)	Acanthamoeba castellanii str. Neff	14920650
ACA1_133140	mRNA	ACA1_133140	NW_004457545.1	7254	10586	R	ACA1_133140	complement(join(<7254..8004,8095..8185,8261..8380,8451..8606,8670..8821,8897..9184,9254..9359,9421..9507,9577..9764,9824..10071,10142..10474,10566..>10586))	Acanthamoeba castellanii str. Neff	14920641
ACA1_133150	mRNA	ACA1_133150	NW_004457545.1	10678	12297	R	ACA1_133150	complement(join(<10678..10859,10939..11072,11147..11242,11312..11393,11459..11555,11618..11781,11860..11988,12114..>12297))	Acanthamoeba castellanii str. Neff	14920642
ACA1_133160	mRNA	ACA1_133160	NW_004457545.1	12760	13669	D	ACA1_133160	join(<12760..13576,13647..>13669)	Acanthamoeba castellanii str. Neff	14920643
ACA1_133170	mRNA	ACA1_133170	NW_004457545.1	13775	15938	D	ACA1_133170	join(<13775..14246,14326..14414,14483..14570,14643..14774,14867..15007,15097..15147,15248..15372,15453..15608,15702..>15938)	Acanthamoeba castellanii str. Neff	14920644
ACA1_133180	mRNA	ACA1_133180	NW_004457545.1	16436	17389	R	ACA1_133180	complement(<16436..>17389)	Acanthamoeba castellanii str. Neff	14920645
ACA1_133200	mRNA	ACA1_133200	NW_004457545.1	19038	24787	R	ACA1_133200	complement(join(<19038..19929,20020..20160,20247..20338,20415..22016,22116..22231,22321..22443,22509..22613,22710..22879,22970..23070,23161..24305,24601..>24787))	Acanthamoeba castellanii str. Neff	14920647
ACA1_133210	mRNA	ACA1_133210	NW_004457545.1	25509	27039	D	ACA1_133210	join(<25509..25632,25700..25830,25906..26085,26146..26265,26335..>27039)	Acanthamoeba castellanii str. Neff	14920648
ACA1_133320	mRNA	ACA1_133320	NW_004457545.1	29151	31711	D	ACA1_133320	join(<29151..29877,29998..30087,30121..30431,30462..31061,31083..31138,31231..31451,31524..>31711)	Acanthamoeba castellanii str. Neff	14920651
ACA1_133330	mRNA	ACA1_133330	NW_004457545.1	31903	33984	D	ACA1_133330	join(<31903..32071,32183..32322,32395..32445,32549..32724,32830..32999,33147..33253,33323..33384,33475..33577,33663..33817,33921..>33984)	Acanthamoeba castellanii str. Neff	14920652
ACA1_133340	mRNA	ACA1_133340	NW_004457545.1	34057	35563	R	ACA1_133340	complement(join(<34057..34977,35046..35220,35295..>35563))	Acanthamoeba castellanii str. Neff	14920653
ACA1_133350	mRNA	ACA1_133350	NW_004457545.1	35753	37519	R	ACA1_133350	complement(join(<35753..35983,36055..36253,36330..36463,36576..36672,36773..36873,36967..37041,37139..37253,37329..>37519))	Acanthamoeba castellanii str. Neff	14920654
ACA1_133360	mRNA	ACA1_133360	NW_004457545.1	37677	38459	R	ACA1_133360	complement(join(<37677..37809,37879..37945,38021..38082,38103..38232,38294..>38459))	Acanthamoeba castellanii str. Neff	14920655
ACA1_133370	mRNA	ACA1_133370	NW_004457545.1	38701	40748	R	ACA1_133370	complement(join(<38701..38840,38925..39283,39353..39496,39610..>40748))	Acanthamoeba castellanii str. Neff	14920656
ACA1_133380	mRNA	ACA1_133380	NW_004457545.1	40816	41701	R	ACA1_133380	complement(join(<40816..41482,41565..>41701))	Acanthamoeba castellanii str. Neff	14920657
ACA1_133390	mRNA	ACA1_133390	NW_004457545.1	41856	45447	R	ACA1_133390	complement(join(<41856..41931,42146..42771,42861..42974,43034..43077,43304..43631,43704..43843,43925..44038,44121..44246,44311..44338,44401..44570,44635..44743,44865..45081,45180..45276,45348..>45447))	Acanthamoeba castellanii str. Neff	14920658
ACA1_133400	mRNA	ACA1_133400	NW_004457545.1	45699	47224	R	ACA1_133400	complement(join(<45699..45856,45895..46132,46217..46687,46719..47115,47184..>47224))	Acanthamoeba castellanii str. Neff	14920659
ACA1_133410	mRNA	ACA1_133410	NW_004457545.1	48025	49678	R	ACA1_133410	complement(join(<48025..48088,48155..48314,48393..48569,48650..48685,48760..48843,48918..49073,49142..49336,49447..>49678))	Acanthamoeba castellanii str. Neff	14920660
ACA1_133420	mRNA	ACA1_133420	NW_004457545.1	49807	50100	D	ACA1_133420	join(<49807..49977,50047..>50100)	Acanthamoeba castellanii str. Neff	14920661
ACA1_133430	mRNA	ACA1_133430	NW_004457545.1	50258	51510	D	ACA1_133430	join(<50258..50524,50601..50728,50812..50902,50965..51144,51238..51363,51442..>51510)	Acanthamoeba castellanii str. Neff	14920662
ACA1_133440	mRNA	ACA1_133440	NW_004457545.1	52064	54538	R	ACA1_133440	complement(join(<52064..52793,53046..>54538))	Acanthamoeba castellanii str. Neff	14920663
ACA1_133450	mRNA	ACA1_133450	NW_004457545.1	55572	60540	D	ACA1_133450	join(<55572..55591,55717..55787,55889..56467,56487..56641,56715..56798,56888..57010,57116..57234,57333..57463,57565..57673,57792..58527,58628..58774,58889..59054,59094..59182,59313..59429,59536..59613,59704..59791,59870..59967,60071..60189,60276..>60540)	Acanthamoeba castellanii str. Neff	14920664
ACA1_133460	mRNA	ACA1_133460	NW_004457545.1	60632	61491	D	ACA1_133460	join(<60632..60893,60986..61200,61315..>61491)	Acanthamoeba castellanii str. Neff	14920665
ACA1_133470	mRNA	ACA1_133470	NW_004457545.1	61507	63588	R	ACA1_133470	complement(join(<61507..61817,61887..61987,62071..62230,62317..62332,62373..62521,62592..62726,62825..62984,63012..63129,63205..63251,63324..63475,63525..>63588))	Acanthamoeba castellanii str. Neff	14920666
ACA1_133480	mRNA	ACA1_133480	NW_004457545.1	63855	64840	D	ACA1_133480	join(<63855..63897,63909..64015,64076..64173,64235..64308,64392..64483,64565..64673,64737..>64840)	Acanthamoeba castellanii str. Neff	14920667
ACA1_133490	mRNA	ACA1_133490	NW_004457545.1	65446	67650	D	ACA1_133490	join(<65446..65612,65697..65743,65822..65981,66049..66167,66266..66576,66695..66813,66893..67005,67073..67165,67252..67343,67441..>67650)	Acanthamoeba castellanii str. Neff	14920668
ACA1_133500	mRNA	ACA1_133500	NW_004457545.1	68616	71885	D	ACA1_133500	<68616..>71885	Acanthamoeba castellanii str. Neff	14920669
ACA1_133510	mRNA	ACA1_133510	NW_004457545.1	72470	74538	D	ACA1_133510	join(<72470..72502,72599..72695,72773..72864,72932..73006,73113..73196,73284..73371,73454..73539,73637..73816,73961..74025,74147..74275,74382..>74538)	Acanthamoeba castellanii str. Neff	14920670
ACA1_133520	mRNA	ACA1_133520	NW_004457545.1	74873	75760	D	ACA1_133520	join(<74873..74939,74967..>75760)	Acanthamoeba castellanii str. Neff	14920671
ACA1_133530	mRNA	ACA1_133530	NW_004457545.1	75964	76638	D	ACA1_133530	<75964..>76638	Acanthamoeba castellanii str. Neff	14920672
ACA1_133540	mRNA	ACA1_133540	NW_004457545.1	76813	78060	D	ACA1_133540	join(<76813..76854,76943..77053,77236..77341,77441..77549,77634..77765,77862..>78060)	Acanthamoeba castellanii str. Neff	14920673
ACA1_133550	mRNA	ACA1_133550	NW_004457545.1	78421	79307	D	ACA1_133550	join(<78421..78481,78544..78717,78791..78927,78987..79089,79147..>79307)	Acanthamoeba castellanii str. Neff	14920674
ACA1_133560	mRNA	ACA1_133560	NW_004457545.1	79841	86432	D	ACA1_133560	join(<79841..79859,80010..80273,80360..80454,80534..80626,80704..80838,80910..81128,81210..81372,81454..81750,81818..81956,82037..82148,82235..82317,82395..82829,82891..83026,83112..84003,84078..84331,84414..84760,84832..86173,86253..>86432)	Acanthamoeba castellanii str. Neff	14920675
ACA1_133570	mRNA	ACA1_133570	NW_004457545.1	86570	87490	R	ACA1_133570	complement(join(<86570..86946,87107..87308,87350..>87490))	Acanthamoeba castellanii str. Neff	14920676
ACA1_133580	mRNA	ACA1_133580	NW_004457545.1	87614	89338	D	ACA1_133580	join(<87614..88013,88084..88575,88712..88882,88962..89113,89213..>89338)	Acanthamoeba castellanii str. Neff	14920677
ACA1_133590	mRNA	ACA1_133590	NW_004457545.1	89550	91408	R	ACA1_133590	complement(join(<89550..89660,89755..89865,90020..90285,90359..90639,90716..90786,90890..91014,91282..>91408))	Acanthamoeba castellanii str. Neff	14920678
ACA1_133600	mRNA	ACA1_133600	NW_004457545.1	91639	94250	R	ACA1_133600	complement(join(<91639..93394,93554..93725,93833..94070,94209..>94250))	Acanthamoeba castellanii str. Neff	14920679
ACA1_133610	mRNA	ACA1_133610	NW_004457545.1	94605	95348	R	ACA1_133610	complement(join(<94605..94633,94736..94819,94931..95168,95307..>95348))	Acanthamoeba castellanii str. Neff	14920680
ACA1_133720	mRNA	ACA1_133720	NW_004457545.1	95880	97100	D	ACA1_133720	join(<95880..96746,96813..>97100)	Acanthamoeba castellanii str. Neff	14920681
ACA1_133730	mRNA	ACA1_133730	NW_004457545.1	97372	98764	D	ACA1_133730	join(<97372..98370,98480..>98764)	Acanthamoeba castellanii str. Neff	14920682
ACA1_133740	mRNA	ACA1_133740	NW_004457545.1	99022	99295	R	ACA1_133740	complement(join(<99022..99102,99182..>99295))	Acanthamoeba castellanii str. Neff	14920683
ACA1_133850	mRNA	ACA1_133850	NW_004457545.1	99495	99973	R	ACA1_133850	complement(join(<99495..99509,99523..99651,99719..>99973))	Acanthamoeba castellanii str. Neff	14920684
ACA1_133860	mRNA	ACA1_133860	NW_004457545.1	100321	100996	R	ACA1_133860	complement(join(<100321..100502,100566..100687,100761..100804,100874..>100996))	Acanthamoeba castellanii str. Neff	14920685
ACA1_133970	mRNA	ACA1_133970	NW_004457545.1	101953	102274	R	ACA1_133970	complement(join(<101953..102033,102113..>102274))	Acanthamoeba castellanii str. Neff	14920686
ACA1_124010	mRNA	ACA1_124010	NW_004457542.1	77	2292	R	ACA1_124010	complement(join(<77..182,299..420,537..635,788..965,1054..1196,1455..1625,1719..1867,2058..>2292))	Acanthamoeba castellanii str. Neff	14920634
ACA1_124120	mRNA	ACA1_124120	NW_004457542.1	2636	3168	R	ACA1_124120	complement(join(<2636..2704,2799..2875,2984..3047,3121..>3168))	Acanthamoeba castellanii str. Neff	14920633
ACA1_124230	mRNA	ACA1_124230	NW_004457542.1	5122	6594	R	ACA1_124230	complement(join(<5122..5213,5376..5508,5634..5713,5780..5846,5950..6063,6082..6469,6578..>6594))	Acanthamoeba castellanii str. Neff	14920636
ACA1_124240	mRNA	ACA1_124240	NW_004457542.1	7105	8253	R	ACA1_124240	complement(join(<7105..7160,7240..7291,7373..7466,7545..7660,7734..7850,7953..8006,8122..>8253))	Acanthamoeba castellanii str. Neff	14920638
ACA1_124250	mRNA	ACA1_124250	NW_004457542.1	8456	9130	R	ACA1_124250	complement(join(<8456..8682,8805..8902,9006..>9130))	Acanthamoeba castellanii str. Neff	14920639
ACA1_124260	mRNA	ACA1_124260	NW_004457542.1	9244	10213	R	ACA1_124260	complement(join(<9244..9493,9876..>10213))	Acanthamoeba castellanii str. Neff	14920640
ACA1_124470	mRNA	ACA1_124470	NW_004457542.1	14834	15366	D	ACA1_124470	join(<14834..14870,15085..15278,15325..>15366)	Acanthamoeba castellanii str. Neff	14920637
ACA1_124480	mRNA	ACA1_124480	NW_004457542.1	17254	17864	R	ACA1_124480	complement(join(<17254..17487,17577..17710,17801..>17864))	Acanthamoeba castellanii str. Neff	14920635
ACA1_124590	mRNA	ACA1_124590	NW_004457542.1	22969	24280	D	ACA1_124590	join(<22969..22991,23112..23246,23293..23489,23616..23711,23791..23937,24027..>24280)	Acanthamoeba castellanii str. Neff	14920632
ACA1_197290	mRNA	ACA1_197290	NW_004457538.1	77	725	D	ACA1_197290	join(<77..168,253..356,424..>725)	Acanthamoeba castellanii str. Neff	14920631
ACA1_197300	mRNA	ACA1_197300	NW_004457538.1	770	1560	R	ACA1_197300	complement(join(<770..918,995..1069,1154..1400,1498..>1560))	Acanthamoeba castellanii str. Neff	14920403
ACA1_197310	mRNA	ACA1_197310	NW_004457538.1	3890	4260	R	ACA1_197310	complement(join(<3890..4171,4195..>4260))	Acanthamoeba castellanii str. Neff	14920404
ACA1_197320	mRNA	ACA1_197320	NW_004457538.1	4370	5472	R	ACA1_197320	complement(join(<4370..5322,5391..>5472))	Acanthamoeba castellanii str. Neff	14920405
ACA1_197330	mRNA	ACA1_197330	NW_004457538.1	5752	7628	R	ACA1_197330	complement(join(<5752..6171,6347..6409,6491..6686,6757..6902,6993..7087,7213..7314,7366..7472,7573..>7628))	Acanthamoeba castellanii str. Neff	14920406
ACA1_197440	mRNA	ACA1_197440	NW_004457538.1	7814	10043	R	ACA1_197440	complement(join(<7814..7856,7927..8028,8104..8222,8293..8351,8424..8606,8694..8804,8882..8960,9038..9169,9251..9353,9447..9537,9628..9735,9800..>10043))	Acanthamoeba castellanii str. Neff	14920407
ACA1_197450	mRNA	ACA1_197450	NW_004457538.1	10692	11923	R	ACA1_197450	complement(join(<10692..10916,10993..11127,11200..11291,11355..11462,11537..11608,11684..11768,11849..>11923))	Acanthamoeba castellanii str. Neff	14920408
ACA1_197460	mRNA	ACA1_197460	NW_004457538.1	11942	12511	R	ACA1_197460	complement(join(<11942..12091,12153..12314,12380..>12511))	Acanthamoeba castellanii str. Neff	14920409
ACA1_197470	mRNA	ACA1_197470	NW_004457538.1	13264	19917	D	ACA1_197470	join(<13264..13431,13584..13739,13944..14131,14235..14374,14630..14763,14872..14987,15076..15168,15267..15404,15488..15667,15750..15854,15969..16053,16136..16231,16338..16543,16614..16768,16951..17025,17206..17277,17373..17863,17978..18089,18172..18281,18574..18917,19002..19316,19414..19733,19862..>19917)	Acanthamoeba castellanii str. Neff	14920410
ACA1_197480	mRNA	ACA1_197480	NW_004457538.1	20136	22211	D	ACA1_197480	join(<20136..20242,20313..20465,20550..20942,21011..21098,21161..21234,21391..21574,21660..21881,22014..>22211)	Acanthamoeba castellanii str. Neff	14920411
ACA1_197490	mRNA	ACA1_197490	NW_004457538.1	22486	26044	D	ACA1_197490	join(<22486..22538,22704..22836,22972..23075,23203..23284,23394..23570,23724..23955,24071..24424,24544..24728,24827..25055,25127..25481,25567..25643,25959..>26044)	Acanthamoeba castellanii str. Neff	14920412
ACA1_197600	mRNA	ACA1_197600	NW_004457538.1	26540	28087	R	ACA1_197600	complement(join(<26540..26611,26740..26872,26962..27179,27319..27404,27514..27601,27729..27798,27891..27943,28025..>28087))	Acanthamoeba castellanii str. Neff	14920413
ACA1_197610	mRNA	ACA1_197610	NW_004457538.1	28527	32515	R	ACA1_197610	complement(join(<28527..28652,29886..30084,30207..30431,30542..30704,30827..31138,31219..31330,31422..31489,31625..31667,31715..31827,31930..32136,32368..>32515))	Acanthamoeba castellanii str. Neff	14920414
ACA1_197720	mRNA	ACA1_197720	NW_004457538.1	33600	34443	D	ACA1_197720	join(<33600..33800,33881..34105,34235..34350,34425..>34443)	Acanthamoeba castellanii str. Neff	14920415
ACA1_197730	mRNA	ACA1_197730	NW_004457538.1	34481	37993	R	ACA1_197730	complement(join(<34481..34619,34700..34890,35020..35571,35661..35771,35897..36034,36123..36266,36282..37052,37126..37428,37548..37717,37849..>37993))	Acanthamoeba castellanii str. Neff	14920416
ACA1_197840	mRNA	ACA1_197840	NW_004457538.1	38331	39146	D	ACA1_197840	<38331..>39146	Acanthamoeba castellanii str. Neff	14920417
ACA1_197850	mRNA	ACA1_197850	NW_004457538.1	39216	40920	R	ACA1_197850	complement(join(<39216..39375,39505..39614,39698..39797,39885..39981,40110..40179,40275..40430,40514..40621,40720..>40920))	Acanthamoeba castellanii str. Neff	14920418
ACA1_197860	mRNA	ACA1_197860	NW_004457538.1	41413	42876	D	ACA1_197860	join(<41413..41562,41692..41767,41859..41974,42063..42144,42273..42328,42396..42497,42576..42737,42826..>42876)	Acanthamoeba castellanii str. Neff	14920419
ACA1_197870	mRNA	ACA1_197870	NW_004457538.1	43245	45202	D	ACA1_197870	join(<43245..43471,43657..44165,44238..44615,44725..44842,44913..44973,45059..>45202)	Acanthamoeba castellanii str. Neff	14920420
ACA1_197880	mRNA	ACA1_197880	NW_004457538.1	45810	46764	R	ACA1_197880	complement(join(<45810..46052,46120..46521,46606..>46764))	Acanthamoeba castellanii str. Neff	14920421
ACA1_197890	mRNA	ACA1_197890	NW_004457538.1	47778	50154	D	ACA1_197890	join(<47778..47808,47915..48015,48132..48477,48555..48632,48719..49967,50013..>50154)	Acanthamoeba castellanii str. Neff	14920422
ACA1_197900	mRNA	ACA1_197900	NW_004457538.1	50593	53834	R	ACA1_197900	complement(join(<50593..50691,50807..50906,51005..51138,51266..51469,51584..51676,51782..51955,52143..52268,52644..52730,52846..52945,53045..53178,53428..53631,53742..>53834))	Acanthamoeba castellanii str. Neff	14920423
ACA1_198110	mRNA	ACA1_198110	NW_004457538.1	54248	54621	R	ACA1_198110	complement(join(<54248..54490,54514..>54621))	Acanthamoeba castellanii str. Neff	14920424
ACA1_198120	mRNA	ACA1_198120	NW_004457538.1	54782	57285	D	ACA1_198120	join(<54782..54991,55056..55112,55139..55267,55382..55534,55671..55829,55951..56070,56179..56313,56381..56510,56648..56795,56911..57060,57207..>57285)	Acanthamoeba castellanii str. Neff	14920425
ACA1_198130	mRNA	ACA1_198130	NW_004457538.1	57150	58050	R	ACA1_198130	complement(join(<57150..57514,57684..>58050))	Acanthamoeba castellanii str. Neff	14920426
ACA1_198140	mRNA	ACA1_198140	NW_004457538.1	58587	61355	R	ACA1_198140	complement(join(<58587..58862,58939..59067,59136..59288,59367..59617,59730..60315,60511..60942,61023..>61355))	Acanthamoeba castellanii str. Neff	14920427
ACA1_198250	mRNA	ACA1_198250	NW_004457538.1	63450	66669	D	ACA1_198250	join(<63450..63656,63722..63778,63848..63931,64088..64198,64337..64495,64634..64753,64889..64990,65054..65183,65368..65515,65679..65828,65976..66075,66161..66357,66477..>66669)	Acanthamoeba castellanii str. Neff	14920428
ACA1_198260	mRNA	ACA1_198260	NW_004457538.1	66756	66962	R	ACA1_198260	complement(<66756..>66962)	Acanthamoeba castellanii str. Neff	14920429
ACA1_198270	mRNA	ACA1_198270	NW_004457538.1	67583	68975	R	ACA1_198270	complement(join(<67583..67689,67773..68008,68116..68287,68384..>68975))	Acanthamoeba castellanii str. Neff	14920430
ACA1_198280	mRNA	ACA1_198280	NW_004457538.1	69817	71405	R	ACA1_198280	complement(join(<69817..69939,70039..70227,70346..70416,70499..70586,70693..70812,70891..71086,71269..>71405))	Acanthamoeba castellanii str. Neff	14920431
ACA1_198290	mRNA	ACA1_198290	NW_004457538.1	71893	74076	D	ACA1_198290	join(<71893..72010,72168..72275,72367..72415,72492..73023,73109..73226,73314..73529,73634..>74076)	Acanthamoeba castellanii str. Neff	14920432
ACA1_198300	mRNA	ACA1_198300	NW_004457538.1	75082	76677	R	ACA1_198300	complement(join(<75082..75156,75254..75387,75505..75688,75779..75853,75959..76180,76288..76440,76624..>76677))	Acanthamoeba castellanii str. Neff	14920433
ACA1_198310	mRNA	ACA1_198310	NW_004457538.1	77036	77299	D	ACA1_198310	join(<77036..77058,77083..>77299)	Acanthamoeba castellanii str. Neff	14920434
ACA1_198320	mRNA	ACA1_198320	NW_004457538.1	77494	80873	R	ACA1_198320	complement(join(<77494..77661,77835..77930,78070..78200,78294..78420,78518..78631,78704..78755,78849..78967,79082..79204,79273..79409,79550..79784,79843..79909,79991..80241,80331..80438,80559..80639,80727..>80873))	Acanthamoeba castellanii str. Neff	14920435
ACA1_198330	mRNA	ACA1_198330	NW_004457538.1	81540	82294	D	ACA1_198330	join(<81540..81902,81968..>82294)	Acanthamoeba castellanii str. Neff	14920436
ACA1_198340	mRNA	ACA1_198340	NW_004457538.1	82418	83804	R	ACA1_198340	complement(join(<82418..82459,82542..82599,82726..82828,82929..82983,83065..83176,83275..83417,83512..83569,83644..>83804))	Acanthamoeba castellanii str. Neff	14920437
ACA1_198350	mRNA	ACA1_198350	NW_004457538.1	83987	87716	R	ACA1_198350	complement(join(<83987..85099,85183..85751,85978..86055,86150..>87716))	Acanthamoeba castellanii str. Neff	14920438
ACA1_198360	mRNA	ACA1_198360	NW_004457538.1	89679	91679	R	ACA1_198360	complement(join(<89679..89805,89894..90041,90093..90257,90392..90528,90817..90958,91135..91209,91346..91498,91595..>91679))	Acanthamoeba castellanii str. Neff	14920439
ACA1_198370	mRNA	ACA1_198370	NW_004457538.1	91940	93623	R	ACA1_198370	complement(join(<91940..91953,91986..92133,92231..92479,92571..92821,92908..93014,93098..93180,93269..93409,93531..>93623))	Acanthamoeba castellanii str. Neff	14920440
ACA1_198380	mRNA	ACA1_198380	NW_004457538.1	94048	100362	R	ACA1_198380	complement(join(<94048..95669,95776..95953,96055..96297,96393..96505,96605..96698,96795..96914,97028..97317,97435..97537,97667..97810,97902..98009,98086..98182,98260..98671,98842..98881,99017..99150,99241..99559,99772..99816,99878..100114,100273..>100362))	Acanthamoeba castellanii str. Neff	14920441
ACA1_198390	mRNA	ACA1_198390	NW_004457538.1	101173	102419	R	ACA1_198390	complement(join(<101173..101291,101400..101502,101602..101759,101837..101887,101960..102040,102107..>102419))	Acanthamoeba castellanii str. Neff	14920442
ACA1_198400	mRNA	ACA1_198400	NW_004457538.1	102729	104408	R	ACA1_198400	complement(join(<102729..103133,103228..103286,103360..103417,103545..103635,103766..103859,104038..104173,104245..104278,104353..>104408))	Acanthamoeba castellanii str. Neff	14920443
ACA1_198410	mRNA	ACA1_198410	NW_004457538.1	104934	106357	D	ACA1_198410	join(<104934..105215,105302..105627,105712..105806,105909..>106357)	Acanthamoeba castellanii str. Neff	14920444
ACA1_198430	mRNA	ACA1_198430	NW_004457538.1	109231	112330	D	ACA1_198430	join(<109231..109318,109463..109595,109723..109785,109856..110681,110783..111214,111294..111686,111776..>112330)	Acanthamoeba castellanii str. Neff	14920446
ACA1_198440	mRNA	ACA1_198440	NW_004457538.1	112632	113031	R	ACA1_198440	complement(join(<112632..112706,112786..>113031))	Acanthamoeba castellanii str. Neff	14920447
ACA1_198450	mRNA	ACA1_198450	NW_004457538.1	113625	116904	R	ACA1_198450	complement(join(<113625..113753,113835..113988,114141..114685,114764..114913,114987..115095,115182..115393,115504..115676,115756..115853,115947..116069,116153..116244,116326..116397,116479..>116904))	Acanthamoeba castellanii str. Neff	14920448
ACA1_198460	mRNA	ACA1_198460	NW_004457538.1	117423	120032	D	ACA1_198460	join(<117423..117495,117566..117690,117765..117851,117946..118066,118159..118301,118441..118662,118722..118927,119008..119149,119257..119697,119802..>120032)	Acanthamoeba castellanii str. Neff	14920449
ACA1_198470	mRNA	ACA1_198470	NW_004457538.1	120707	122393	R	ACA1_198470	complement(join(<120707..121796,121993..>122393))	Acanthamoeba castellanii str. Neff	14920450
ACA1_198480	mRNA	ACA1_198480	NW_004457538.1	122823	125748	D	ACA1_198480	join(<122823..122946,123007..123077,123170..123277,123289..123355,123486..123548,123654..123724,123855..123971,124090..124168,124309..124468,124563..124661,124744..124887,124975..125119,125236..>125748)	Acanthamoeba castellanii str. Neff	14920451
ACA1_198490	mRNA	ACA1_198490	NW_004457538.1	125828	126662	R	ACA1_198490	complement(join(<125828..125904,125972..126106,126180..126331,126424..>126662))	Acanthamoeba castellanii str. Neff	14920452
ACA1_198500	mRNA	ACA1_198500	NW_004457538.1	126831	128398	D	ACA1_198500	join(<126831..127204,127294..127436,127541..127648,127733..127854,127972..128126,128281..>128398)	Acanthamoeba castellanii str. Neff	14920453
ACA1_198510	mRNA	ACA1_198510	NW_004457538.1	128965	130662	D	ACA1_198510	<128965..>130662	Acanthamoeba castellanii str. Neff	14920454
ACA1_198520	mRNA	ACA1_198520	NW_004457538.1	131140	133029	R	ACA1_198520	complement(join(<131140..131270,131390..131500,131616..131730,131832..132030,132169..132211,132330..132428,132779..132850,132951..>133029))	Acanthamoeba castellanii str. Neff	14920455
ACA1_198530	mRNA	ACA1_198530	NW_004457538.1	133266	134962	R	ACA1_198530	complement(join(<133266..133386,133490..133746,133826..133936,134025..134158,134241..134374,134491..134575,134687..134840,134927..>134962))	Acanthamoeba castellanii str. Neff	14920456
ACA1_198540	mRNA	ACA1_198540	NW_004457538.1	135620	140891	D	ACA1_198540	join(<135620..135743,135862..135967,136036..136172,136246..136451,136558..136680,136800..136928,137055..137314,137386..137560,137663..137766,137956..138130,138236..138346,138471..138551,138662..138895,139041..139163,139297..139488,139576..139791,139925..140050,140160..140254,140352..140506,140632..>140891)	Acanthamoeba castellanii str. Neff	14920457
ACA1_198550	mRNA	ACA1_198550	NW_004457538.1	141015	141977	R	ACA1_198550	complement(join(<141015..141192,141290..141548,141642..141784,141907..>141977))	Acanthamoeba castellanii str. Neff	14920458
ACA1_198560	mRNA	ACA1_198560	NW_004457538.1	143570	144884	R	ACA1_198560	complement(join(<143570..143644,143738..143872,143949..144047,144147..144296,144405..144506,144657..>144884))	Acanthamoeba castellanii str. Neff	14920459
ACA1_198570	mRNA	ACA1_198570	NW_004457538.1	145306	146888	D	ACA1_198570	join(<145306..145697,145778..145931,146057..146488,146601..146688,146779..>146888)	Acanthamoeba castellanii str. Neff	14920460
ACA1_198580	mRNA	ACA1_198580	NW_004457538.1	147150	149386	D	ACA1_198580	join(<147150..147206,147289..147319,147541..147815,147910..148048,148177..148454,148546..148743,148851..149077,149149..>149386)	Acanthamoeba castellanii str. Neff	14920461
ACA1_198690	mRNA	ACA1_198690	NW_004457538.1	151550	153928	D	ACA1_198690	join(<151550..152050,152150..152285,152385..152422,152533..153630,153722..>153928)	Acanthamoeba castellanii str. Neff	14920462
ACA1_198700	mRNA	ACA1_198700	NW_004457538.1	154144	156357	R	ACA1_198700	complement(join(<154144..154317,154379..154621,154710..154865,154914..155062,155149..155247,155327..155406,155540..155594,155714..155791,155949..>156357))	Acanthamoeba castellanii str. Neff	14920463
ACA1_198710	mRNA	ACA1_198710	NW_004457538.1	156801	158938	R	ACA1_198710	complement(join(<156801..157228,157329..157623,158702..>158938))	Acanthamoeba castellanii str. Neff	14920464
ACA1_198820	mRNA	ACA1_198820	NW_004457538.1	159689	163136	D	ACA1_198820	join(<159689..160353,160560..160719,160880..161002,161120..161280,161398..161488,161573..161770,161857..161916,162053..162216,162292..162361,162435..162612,162742..162878,163008..>163136)	Acanthamoeba castellanii str. Neff	14920465
ACA1_198830	mRNA	ACA1_198830	NW_004457538.1	163290	164355	R	ACA1_198830	complement(join(<163290..163523,163606..>164355))	Acanthamoeba castellanii str. Neff	14920466
ACA1_198840	mRNA	ACA1_198840	NW_004457538.1	164503	166918	D	ACA1_198840	join(<164503..164635,164744..164840,164961..165171,165273..165459,165548..165613,165706..165813,165926..166067,166235..166362,166494..>166918)	Acanthamoeba castellanii str. Neff	14920467
ACA1_198850	mRNA	ACA1_198850	NW_004457538.1	168308	169218	R	ACA1_198850	complement(join(<168308..168505,168666..168758,168835..168946,169014..169087,169165..>169218))	Acanthamoeba castellanii str. Neff	14920468
ACA1_198970	mRNA	ACA1_198970	NW_004457538.1	177551	184226	R	ACA1_198970	complement(join(<177551..177643,177773..177938,178052..178146,178255..178436,178582..179001,179156..179299,179421..179514,179607..179905,180023..180207,180286..180389,180535..180606,180665..181198,181283..181478,181555..182000,182130..182166,182251..182337,182451..182539,182618..182745,182816..182888,183099..183257,183367..183489,183654..183740,183899..183978,184118..>184226))	Acanthamoeba castellanii str. Neff	14920470
ACA1_198980	mRNA	ACA1_198980	NW_004457538.1	184535	187816	R	ACA1_198980	complement(join(<184535..184726,184966..185037,185071..185129,185330..185354,185433..185558,185654..185706,185791..185896,186076..186150,186261..186356,186485..186527,186629..186716,186848..186987,187110..187231,187353..187390,187591..>187816))	Acanthamoeba castellanii str. Neff	14920471
ACA1_198990	mRNA	ACA1_198990	NW_004457538.1	188316	188852	D	ACA1_198990	<188316..>188852	Acanthamoeba castellanii str. Neff	14920472
ACA1_199000	mRNA	ACA1_199000	NW_004457538.1	189035	190434	R	ACA1_199000	complement(join(<189035..189196,189328..189380,189458..189542,189634..189735,189790..>190434))	Acanthamoeba castellanii str. Neff	14920473
ACA1_199010	mRNA	ACA1_199010	NW_004457538.1	190685	192864	D	ACA1_199010	join(<190685..190788,190974..191070,191193..191264,191375..191514,191622..191646,191877..192086,192183..192296,192393..192510,192605..>192864)	Acanthamoeba castellanii str. Neff	14920474
ACA1_199020	mRNA	ACA1_199020	NW_004457538.1	192958	196823	R	ACA1_199020	complement(join(<192958..193356,193484..193606,193743..193847,193999..194064,194186..194307,194406..194616,194706..194851,195047..195116,195272..195355,195436..195546,195694..195809,195899..196060,196154..>196823))	Acanthamoeba castellanii str. Neff	14920475
ACA1_199030	mRNA	ACA1_199030	NW_004457538.1	197532	201371	R	ACA1_199030	complement(join(<197532..197739,197818..198079,198215..198315,198417..198519,198643..198740,198847..198902,199037..199120,199216..199317,199443..199544,199843..199949,200048..200540,200642..200720,200812..201004,201095..201191,201264..>201371))	Acanthamoeba castellanii str. Neff	14920476
ACA1_199040	mRNA	ACA1_199040	NW_004457538.1	201723	205735	R	ACA1_199040	complement(join(<201723..202384,202497..202653,202801..202878,202944..203057,203169..203238,203346..203444,203544..203758,203840..203931,204057..204144,204259..204522,204694..204816,204931..205261,205333..205486,205636..>205735))	Acanthamoeba castellanii str. Neff	14920477
ACA1_199050	mRNA	ACA1_199050	NW_004457538.1	205884	208145	R	ACA1_199050	complement(join(<205884..206369,206498..206563,206708..206902,206996..207169,207193..207507,207652..207699,207725..207801,207899..>208145))	Acanthamoeba castellanii str. Neff	14920478
ACA1_199060	mRNA	ACA1_199060	NW_004457538.1	209240	212039	R	ACA1_199060	complement(join(<209240..209342,209435..209526,209609..209724,209806..209902,210030..210254,210340..210404,210484..210594,210672..210841,210937..211020,211109..211253,211318..211402,211496..211594,211732..211825,211900..>212039))	Acanthamoeba castellanii str. Neff	14920479
ACA1_199070	mRNA	ACA1_199070	NW_004457538.1	212452	213048	R	ACA1_199070	complement(join(<212452..212967,213043..>213048))	Acanthamoeba castellanii str. Neff	14920480
ACA1_199080	mRNA	ACA1_199080	NW_004457538.1	213755	215681	R	ACA1_199080	complement(join(<213755..214015,214361..214543,214569..214883,215014..215162,215263..215446,215673..>215681))	Acanthamoeba castellanii str. Neff	14920481
ACA1_199290	mRNA	ACA1_199290	NW_004457538.1	217069	219416	D	ACA1_199290	join(<217069..217090,217200..217280,217374..217421,217557..217714,217802..217921,218031..218844,218950..>219416)	Acanthamoeba castellanii str. Neff	14920482
ACA1_199300	mRNA	ACA1_199300	NW_004457538.1	219666	220856	R	ACA1_199300	complement(join(<219666..220115,220228..220364,220481..>220856))	Acanthamoeba castellanii str. Neff	14920483
ACA1_199310	mRNA	ACA1_199310	NW_004457538.1	221180	222501	D	ACA1_199310	join(<221180..221561,221668..221888,221968..>222501)	Acanthamoeba castellanii str. Neff	14920484
ACA1_199320	mRNA	ACA1_199320	NW_004457538.1	223094	224452	D	ACA1_199320	join(<223094..223226,223366..223428,223526..223580,223738..223909,223985..224169,224305..>224452)	Acanthamoeba castellanii str. Neff	14920485
ACA1_199330	mRNA	ACA1_199330	NW_004457538.1	224652	226718	D	ACA1_199330	<224652..>226718	Acanthamoeba castellanii str. Neff	14920486
ACA1_199340	mRNA	ACA1_199340	NW_004457538.1	226789	229003	R	ACA1_199340	complement(join(<226789..226890,226986..227179,227259..227323,227408..227495,227599..228040,228112..228260,228360..228453,228525..228578,228677..228748,228842..>229003))	Acanthamoeba castellanii str. Neff	14920487
ACA1_199350	mRNA	ACA1_199350	NW_004457538.1	229517	230457	R	ACA1_199350	complement(join(<229517..229603,229713..229878,230180..>230457))	Acanthamoeba castellanii str. Neff	14920488
ACA1_199360	mRNA	ACA1_199360	NW_004457538.1	231775	234273	R	ACA1_199360	complement(join(<231775..232364,232428..232550,232611..232754,232986..233031,233156..233232,233339..233410,233662..233823,233893..233970,234065..234165,234245..>234273))	Acanthamoeba castellanii str. Neff	14920489
ACA1_199370	mRNA	ACA1_199370	NW_004457538.1	234960	239710	R	ACA1_199370	complement(join(<234960..235100,235215..235474,235574..235905,236019..236090,236182..236295,236395..236578,236660..238382,238476..238856,238948..239146,239262..239353,239452..239578,239673..>239710))	Acanthamoeba castellanii str. Neff	14920490
ACA1_199480	mRNA	ACA1_199480	NW_004457538.1	241182	243227	R	ACA1_199480	complement(join(<241182..241273,241362..241431,241523..241644,241734..241816,241902..242002,242064..242187,242294..242429,242510..242552,242621..242717,242837..242974,243115..>243227))	Acanthamoeba castellanii str. Neff	14920491
ACA1_199490	mRNA	ACA1_199490	NW_004457538.1	243375	245266	D	ACA1_199490	join(<243375..243507,243588..243916,243997..244102,244245..244425,244522..245121,245200..>245266)	Acanthamoeba castellanii str. Neff	14920492
ACA1_199500	mRNA	ACA1_199500	NW_004457538.1	246769	249675	D	ACA1_199500	join(<246769..246917,247064..247190,247294..247349,247481..247552,247647..247733,247817..247986,248060..248169,248279..248443,248514..248627,248735..248790,248908..249005,249141..249243,249332..249429,249542..>249675)	Acanthamoeba castellanii str. Neff	14920493
ACA1_199520	mRNA	ACA1_199520	NW_004457538.1	251869	255057	D	ACA1_199520	join(<251869..251988,252186..252448,252549..252733,252845..252934,253123..253583,253707..253877,253998..254165,254253..254433,254520..254675,254764..254817,254951..>255057)	Acanthamoeba castellanii str. Neff	14920495
ACA1_199530	mRNA	ACA1_199530	NW_004457538.1	255331	256376	R	ACA1_199530	complement(join(<255331..255875,255998..>256376))	Acanthamoeba castellanii str. Neff	14920496
ACA1_199540	mRNA	ACA1_199540	NW_004457538.1	256613	257859	D	ACA1_199540	join(<256613..256796,256901..256965,256989..257094,257189..>257859)	Acanthamoeba castellanii str. Neff	14920497
ACA1_199550	mRNA	ACA1_199550	NW_004457538.1	257974	260698	R	ACA1_199550	complement(join(<257974..259032,259155..259241,259331..259504,259607..259678,259761..259847,259892..260016,260094..260208,260350..260465,260566..>260698))	Acanthamoeba castellanii str. Neff	14920498
ACA1_199560	mRNA	ACA1_199560	NW_004457538.1	260783	262085	R	ACA1_199560	complement(join(<260783..261406,261464..261564,261643..261797,261866..261989,262055..>262085))	Acanthamoeba castellanii str. Neff	14920499
ACA1_199570	mRNA	ACA1_199570	NW_004457538.1	262429	264076	R	ACA1_199570	complement(join(<262429..262535,262727..262808,262933..263050,263230..263886,263958..>264076))	Acanthamoeba castellanii str. Neff	14920500
ACA1_199580	mRNA	ACA1_199580	NW_004457538.1	264843	265478	R	ACA1_199580	complement(join(<264843..265338,265363..>265478))	Acanthamoeba castellanii str. Neff	14920501
ACA1_199590	mRNA	ACA1_199590	NW_004457538.1	266349	268081	R	ACA1_199590	complement(join(<266349..266948,266963..267214,267375..267502,267517..267537,267820..>268081))	Acanthamoeba castellanii str. Neff	14920502
ACA1_199600	mRNA	ACA1_199600	NW_004457538.1	270744	273051	D	ACA1_199600	join(<270744..271804,271893..272113,272240..272451,272562..272765,272878..>273051)	Acanthamoeba castellanii str. Neff	14920503
ACA1_199610	mRNA	ACA1_199610	NW_004457538.1	273053	274002	D	ACA1_199610	join(<273053..273166,273262..273416,273500..273580,273678..273797,273873..>274002)	Acanthamoeba castellanii str. Neff	14920504
ACA1_199620	mRNA	ACA1_199620	NW_004457538.1	274468	280743	D	ACA1_199620	join(<274468..275404,275582..275621,275775..276198,276333..276674,276762..276825,276941..277030,277077..277223,277439..277531,277645..277832,278023..278140,278345..278412,278647..278759,278851..278989,279175..279222,279262..279300,279440..279559,279653..279725,279832..279963,280091..280172,280266..280389,280474..280581,280666..>280743)	Acanthamoeba castellanii str. Neff	14920505
ACA1_199630	mRNA	ACA1_199630	NW_004457538.1	280803	282161	R	ACA1_199630	complement(join(<280803..280964,281072..281181,281352..281475,281553..281776,281857..281900,281968..282051,282139..>282161))	Acanthamoeba castellanii str. Neff	14920506
ACA1_199640	mRNA	ACA1_199640	NW_004457538.1	284578	287348	R	ACA1_199640	complement(join(<284578..286220,286551..286627,286769..286810,286898..287020,287305..>287348))	Acanthamoeba castellanii str. Neff	14920507
ACA1_199650	mRNA	ACA1_199650	NW_004457538.1	288448	288888	D	ACA1_199650	join(<288448..288494,288738..>288888)	Acanthamoeba castellanii str. Neff	14920508
ACA1_199660	mRNA	ACA1_199660	NW_004457538.1	289239	290449	D	ACA1_199660	join(<289239..289243,289288..289357,289379..>290449)	Acanthamoeba castellanii str. Neff	14920509
ACA1_199670	mRNA	ACA1_199670	NW_004457538.1	290804	291721	D	ACA1_199670	join(<290804..290809,290930..291061,291294..291327,291540..>291721)	Acanthamoeba castellanii str. Neff	14920510
ACA1_199680	mRNA	ACA1_199680	NW_004457538.1	291802	296569	D	ACA1_199680	join(<291802..291841,292080..292142,292250..292350,292491..292613,292767..292892,293032..293100,293236..293290,293460..293530,293579..293683,293701..293778,293974..294130,294165..294286,294512..294570,294686..294753,294972..295046,295268..295359,295463..295588,295733..295863,296002..296095,296194..296241,296324..296406,296530..>296569)	Acanthamoeba castellanii str. Neff	14920511
ACA1_199700	mRNA	ACA1_199700	NW_004457538.1	300844	302918	D	ACA1_199700	join(<300844..300899,301049..301171,301409..301538,301770..>302918)	Acanthamoeba castellanii str. Neff	14920513
ACA1_199710	mRNA	ACA1_199710	NW_004457538.1	303406	307113	D	ACA1_199710	join(<303406..303474,303664..303769,303980..304132,304242..304346,304468..304704,304843..305022,305123..305228,305408..305487,305714..305922,306132..306264,306415..306526,306675..306768,306780..306906,306971..>307113)	Acanthamoeba castellanii str. Neff	14920514
ACA1_199720	mRNA	ACA1_199720	NW_004457538.1	307394	309985	R	ACA1_199720	complement(join(<307394..307546,307664..307738,307811..307881,307974..308057,308152..308334,308458..308559,308694..308754,308926..308968,309080..309279,309376..309422,309595..>309985))	Acanthamoeba castellanii str. Neff	14920515
ACA1_199730	mRNA	ACA1_199730	NW_004457538.1	310160	312007	D	ACA1_199730	join(<310160..310437,310518..310617,310821..310943,311257..311386,311469..311549,311642..311709,311851..311873,311935..>312007)	Acanthamoeba castellanii str. Neff	14920516
ACA1_199740	mRNA	ACA1_199740	NW_004457538.1	313961	316477	R	ACA1_199740	complement(join(<313961..314122,314462..314547,314648..314761,314846..314933,315054..315232,315418..315524,315723..315782,315867..315969,316116..316188,316400..>316477))	Acanthamoeba castellanii str. Neff	14920517
ACA1_199750	mRNA	ACA1_199750	NW_004457538.1	317258	319167	R	ACA1_199750	complement(join(<317258..317340,317481..317593,317731..317842,318032..318093,318382..318462,318567..318652,318965..319007,319076..>319167))	Acanthamoeba castellanii str. Neff	14920518
ACA1_199760	mRNA	ACA1_199760	NW_004457538.1	320781	321493	R	ACA1_199760	complement(join(<320781..320804,320942..321033,321067..321376,321428..>321493))	Acanthamoeba castellanii str. Neff	14920519
ACA1_199770	mRNA	ACA1_199770	NW_004457538.1	322385	324228	D	ACA1_199770	join(<322385..322552,322701..322799,322868..322966,323493..323538,323600..323727,323819..323900,324197..>324228)	Acanthamoeba castellanii str. Neff	14920520
ACA1_199780	mRNA	ACA1_199780	NW_004457538.1	324683	327566	R	ACA1_199780	complement(join(<324683..324759,324830..324939,325076..325319,325619..325731,325883..325944,326144..326256,326359..326425,326545..326689,326912..326982,327111..327146,327309..327405,327475..>327566))	Acanthamoeba castellanii str. Neff	14920521
ACA1_199790	mRNA	ACA1_199790	NW_004457538.1	329625	330925	D	ACA1_199790	join(<329625..329824,329950..330001,330020..>330925)	Acanthamoeba castellanii str. Neff	14920522
ACA1_199810	mRNA	ACA1_199810	NW_004457538.1	333853	337090	D	ACA1_199810	join(<333853..334046,334141..334174,334209..334318,334399..334594,334717..334901,335269..335394,335495..335678,335796..335948,336090..336373,336533..336608,336807..336902,337007..>337090)	Acanthamoeba castellanii str. Neff	14920524
ACA1_199830	mRNA	ACA1_199830	NW_004457538.1	343701	349313	R	ACA1_199830	complement(join(<343701..343877,343978..344170,344298..344389,344499..344579,344722..344841,344937..345039,345138..345337,345555..345623,345764..345877,345988..346079,346199..346523,346719..346784,346884..347142,347252..347360,347476..347617,347754..347922,348002..348075,348176..348275,348426..348549,348708..348807,348981..349082,349224..>349313))	Acanthamoeba castellanii str. Neff	14920526
ACA1_199940	mRNA	ACA1_199940	NW_004457538.1	350479	352555	D	ACA1_199940	join(<350479..350491,351000..351118,351274..351334,351427..351653,351743..351933,352009..352115,352222..352292,352415..>352555)	Acanthamoeba castellanii str. Neff	14920527
ACA1_199950	mRNA	ACA1_199950	NW_004457538.1	352818	354403	R	ACA1_199950	complement(join(<352818..353453,353532..354239,354350..>354403))	Acanthamoeba castellanii str. Neff	14920528
ACA1_199960	mRNA	ACA1_199960	NW_004457538.1	355807	359517	R	ACA1_199960	complement(join(<355807..356203,356353..356662,356740..356983,357057..357415,357495..357549,357626..357849,357969..358221,358431..358525,358612..358842,358948..359318,359438..>359517))	Acanthamoeba castellanii str. Neff	14920529
ACA1_199970	mRNA	ACA1_199970	NW_004457538.1	360449	362984	R	ACA1_199970	complement(join(<360449..360514,360609..360788,360880..361063,361140..361240,361357..361595,361667..361865,361945..362016,362123..362195,362302..362444,362592..362717,362841..>362984))	Acanthamoeba castellanii str. Neff	14920530
ACA1_199980	mRNA	ACA1_199980	NW_004457538.1	363269	363920	D	ACA1_199980	join(<363269..363302,363484..>363920)	Acanthamoeba castellanii str. Neff	14920531
ACA1_199990	mRNA	ACA1_199990	NW_004457538.1	364060	365230	D	ACA1_199990	join(<364060..364168,364272..364412,364515..>365230)	Acanthamoeba castellanii str. Neff	14920532
ACA1_200000	mRNA	ACA1_200000	NW_004457538.1	365390	367230	R	ACA1_200000	complement(join(<365390..365602,365701..365781,365871..366050,366164..366300,366438..366558,366633..366695,366802..367043,367155..>367230))	Acanthamoeba castellanii str. Neff	14920533
ACA1_200010	mRNA	ACA1_200010	NW_004457538.1	367539	370537	D	ACA1_200010	join(<367539..367930,368029..368152,368213..368219,368287..368354,368533..368607,368710..368772,368900..369082,369198..369396,369484..369565,369638..369647,369732..369791,369904..370095,370202..>370537)	Acanthamoeba castellanii str. Neff	14920534
ACA1_200020	mRNA	ACA1_200020	NW_004457538.1	371194	373466	D	ACA1_200020	join(<371194..371356,371404..371557,371694..371913,372008..372095,372180..372449,372556..372725,372795..373085,373170..373295,373311..>373466)	Acanthamoeba castellanii str. Neff	14920535
ACA1_200030	mRNA	ACA1_200030	NW_004457538.1	373672	376788	D	ACA1_200030	join(<373672..373705,373788..374116,374239..374396,374503..374729,374796..375040,375131..375272,375318..375623,375914..376008,376105..376227,376297..376359,376459..>376788)	Acanthamoeba castellanii str. Neff	14920536
ACA1_200050	mRNA	ACA1_200050	NW_004457538.1	378809	384379	R	ACA1_200050	complement(join(<378809..378877,378978..379115,379219..379377,379486..379529,379663..379849,379924..380006,380112..380239,380373..380473,380594..380710,380826..380943,381065..381120,381298..381450,381512..381576,381690..381969,382056..382171,382233..382368,382487..382784,382883..383013,383153..383235,383321..383807,383893..383990,384080..384306,384357..>384379))	Acanthamoeba castellanii str. Neff	14920538
ACA1_200060	mRNA	ACA1_200060	NW_004457538.1	384849	385505	R	ACA1_200060	complement(<384849..>385505)	Acanthamoeba castellanii str. Neff	14920539
ACA1_200070	mRNA	ACA1_200070	NW_004457538.1	385709	387257	D	ACA1_200070	join(<385709..385942,386019..386154,386241..386317,386396..386477,386589..386684,386780..386863,386965..387146,387204..>387257)	Acanthamoeba castellanii str. Neff	14920540
ACA1_200080	mRNA	ACA1_200080	NW_004457538.1	387426	388919	R	ACA1_200080	complement(<387426..>388919)	Acanthamoeba castellanii str. Neff	14920541
ACA1_200090	mRNA	ACA1_200090	NW_004457538.1	389345	389842	R	ACA1_200090	complement(<389345..>389842)	Acanthamoeba castellanii str. Neff	14920542
ACA1_200100	mRNA	ACA1_200100	NW_004457538.1	390159	391169	R	ACA1_200100	complement(join(<390159..390262,390354..390425,390540..390869,391004..>391169))	Acanthamoeba castellanii str. Neff	14920543
ACA1_200110	mRNA	ACA1_200110	NW_004457538.1	391403	394688	D	ACA1_200110	join(<391403..391648,391727..391769,391848..392046,392150..392250,392356..392492,392656..392845,392956..393057,393152..393218,393347..393478,393551..393640,393761..393826,393848..393893,393990..394045,394152..394258,394424..394504,394594..>394688)	Acanthamoeba castellanii str. Neff	14920544
ACA1_200120	mRNA	ACA1_200120	NW_004457538.1	394836	399286	R	ACA1_200120	complement(join(<394836..394932,395020..395177,395278..395362,395456..395542,395582..395663,395806..395890,395978..396043,396142..396265,396362..396465,396544..396591,396827..396970,397051..397132,397282..397677,397785..397848,397971..398127,398480..398913,399256..>399286))	Acanthamoeba castellanii str. Neff	14920545
ACA1_200130	mRNA	ACA1_200130	NW_004457538.1	399688	400739	D	ACA1_200130	join(<399688..399873,400115..400186,400303..400419,400518..>400739)	Acanthamoeba castellanii str. Neff	14920546
ACA1_200140	mRNA	ACA1_200140	NW_004457538.1	400963	404755	D	ACA1_200140	join(<400963..401211,401300..401393,401473..401824,401904..401958,402081..402158,402237..402446,402567..402775,402863..402983,403061..403517,403691..403898,404039..404135,404217..404287,404395..404534,404643..>404755)	Acanthamoeba castellanii str. Neff	14920547
ACA1_200150	mRNA	ACA1_200150	NW_004457538.1	405029	405832	R	ACA1_200150	complement(join(<405029..405095,405222..405303,405445..405615,405718..>405832))	Acanthamoeba castellanii str. Neff	14920548
ACA1_200160	mRNA	ACA1_200160	NW_004457538.1	406156	409930	D	ACA1_200160	join(<406156..406177,406303..406754,406909..406999,407111..407577,407674..408106,408198..408376,408452..408826,408925..409010,409129..409339,409430..409519,409616..>409930)	Acanthamoeba castellanii str. Neff	14920549
ACA1_200170	mRNA	ACA1_200170	NW_004457538.1	410128	410546	R	ACA1_200170	complement(join(<410128..410150,410224..410295,410408..>410546))	Acanthamoeba castellanii str. Neff	14920550
ACA1_200180	mRNA	ACA1_200180	NW_004457538.1	411211	411548	D	ACA1_200180	join(<411211..411244,411343..>411548)	Acanthamoeba castellanii str. Neff	14920551
ACA1_200190	mRNA	ACA1_200190	NW_004457538.1	411865	412527	R	ACA1_200190	complement(<411865..>412527)	Acanthamoeba castellanii str. Neff	14920552
ACA1_200200	mRNA	ACA1_200200	NW_004457538.1	412731	414199	R	ACA1_200200	complement(join(<412731..412749,412841..412947,413083..413201,413325..413405,413513..413621,413735..413839,413927..>414199))	Acanthamoeba castellanii str. Neff	14920553
ACA1_200210	mRNA	ACA1_200210	NW_004457538.1	414301	416080	D	ACA1_200210	join(<414301..414446,414511..414580,414666..414767,414854..414913,415000..415076,415178..415280,415369..415431,415560..415686,415791..415922,416046..>416080)	Acanthamoeba castellanii str. Neff	14920554
ACA1_200220	mRNA	ACA1_200220	NW_004457538.1	416443	418140	D	ACA1_200220	join(<416443..416526,416613..416731,416822..416908,416994..417100,417164..417249,417512..417771,417855..>418140)	Acanthamoeba castellanii str. Neff	14920555
ACA1_200230	mRNA	ACA1_200230	NW_004457538.1	418286	418722	R	ACA1_200230	complement(join(<418286..418350,418430..418595,418693..>418722))	Acanthamoeba castellanii str. Neff	14920556
ACA1_200240	mRNA	ACA1_200240	NW_004457538.1	418801	424690	R	ACA1_200240	complement(join(<418801..418890,418977..419031,419112..419174,419280..419408,419548..419661,419756..419936,420066..420288,420430..420483,420569..420676,420765..420857,420989..421233,421333..421477,421664..421848,421959..422004,422093..422228,422301..422493,422615..422752,422805..422931,423041..423153,423298..423406,423506..423590,423722..423979,424070..424400,424498..>424690))	Acanthamoeba castellanii str. Neff	14920557
ACA1_200250	mRNA	ACA1_200250	NW_004457538.1	425056	427540	R	ACA1_200250	complement(join(<425056..425121,425221..425366,425468..425668,425738..425935,426009..426074,426157..426231,426368..426437,426559..426696,427009..427113,427217..427245,427341..427370,427531..>427540))	Acanthamoeba castellanii str. Neff	14920558
ACA1_200360	mRNA	ACA1_200360	NW_004457538.1	428064	429220	D	ACA1_200360	join(<428064..428430,428590..428775,428908..428999,429164..>429220)	Acanthamoeba castellanii str. Neff	14920559
ACA1_200370	mRNA	ACA1_200370	NW_004457538.1	429387	431750	D	ACA1_200370	join(<429387..429944,430088..430270,430395..430659,430784..430990,431108..431135,431215..431258,431275..>431750)	Acanthamoeba castellanii str. Neff	14920560
ACA1_200380	mRNA	ACA1_200380	NW_004457538.1	431828	435234	R	ACA1_200380	complement(join(<431828..432015,432106..432192,432307..432369,432388..432545,432659..433033,433102..433184,433267..433671,433771..433883,433987..434057,434302..434381,434468..434552,434919..435018,435162..>435234))	Acanthamoeba castellanii str. Neff	14920561
ACA1_200390	mRNA	ACA1_200390	NW_004457538.1	435339	436040	R	ACA1_200390	complement(<435339..>436040)	Acanthamoeba castellanii str. Neff	14920562
ACA1_200400	mRNA	ACA1_200400	NW_004457538.1	436220	437782	R	ACA1_200400	complement(join(<436220..436327,436538..436630,436710..436826,436908..436988,437107..437374,437500..437605,437740..>437782))	Acanthamoeba castellanii str. Neff	14920563
ACA1_200410	mRNA	ACA1_200410	NW_004457538.1	437881	440035	D	ACA1_200410	join(<437881..437911,437926..437945,437962..438046,438253..438476,438593..438692,438784..438881,439046..439198,439289..439430,439541..439681,439794..439892,440010..>440035)	Acanthamoeba castellanii str. Neff	14920564
ACA1_200420	mRNA	ACA1_200420	NW_004457538.1	440102	441590	R	ACA1_200420	complement(join(<440102..440309,440412..440581,440680..440787,440897..440964,441140..441194,441286..441339,441450..>441590))	Acanthamoeba castellanii str. Neff	14920565
ACA1_200430	mRNA	ACA1_200430	NW_004457538.1	442058	443491	R	ACA1_200430	complement(join(<442058..442414,442662..443122,443179..>443491))	Acanthamoeba castellanii str. Neff	14920566
ACA1_200540	mRNA	ACA1_200540	NW_004457538.1	444123	445052	D	ACA1_200540	join(<444123..444785,444957..>445052)	Acanthamoeba castellanii str. Neff	14920567
ACA1_200550	mRNA	ACA1_200550	NW_004457538.1	445337	447056	R	ACA1_200550	complement(join(<445337..445431,445585..445747,445854..446000,446118..446203,446334..446427,446553..446876,446985..>447056))	Acanthamoeba castellanii str. Neff	14920568
ACA1_200560	mRNA	ACA1_200560	NW_004457538.1	447923	449772	R	ACA1_200560	complement(join(<447923..448013,448089..448142,448230..448311,448417..448510,448603..448706,448791..449033,449122..449232,449332..449449,449563..>449772))	Acanthamoeba castellanii str. Neff	14920569
ACA1_200570	mRNA	ACA1_200570	NW_004457538.1	450572	452872	D	ACA1_200570	join(<450572..450773,450933..451013,451143..451247,451286..451383,451491..451698,451813..451891,452000..452052,452160..452232,452551..452656,452750..>452872)	Acanthamoeba castellanii str. Neff	14920570
ACA1_200680	mRNA	ACA1_200680	NW_004457538.1	453699	454272	D	ACA1_200680	join(<453699..453818,453944..454059,454153..454222,454237..>454272)	Acanthamoeba castellanii str. Neff	14920571
ACA1_200690	mRNA	ACA1_200690	NW_004457538.1	455405	457290	R	ACA1_200690	complement(join(<455405..455495,455571..455624,455712..455793,455899..455992,456085..456188,456295..456537,456625..456735,456841..456958,457081..>457290))	Acanthamoeba castellanii str. Neff	14920572
ACA1_200900	mRNA	ACA1_200900	NW_004457538.1	458834	460681	D	ACA1_200900	join(<458834..459035,459157..459237,459367..459471,459522..459618,460365..460470,460559..>460681)	Acanthamoeba castellanii str. Neff	14920573
ACA1_201010	mRNA	ACA1_201010	NW_004457538.1	461574	462887	D	ACA1_201010	join(<461574..461693,461766..461935,462024..462093,462175..462273,462344..462387,462452..462546,462621..462694,462777..>462887)	Acanthamoeba castellanii str. Neff	14920574
ACA1_201020	mRNA	ACA1_201020	NW_004457538.1	462997	465919	D	ACA1_201020	join(<462997..463240,463304..463417,463498..463874,464001..464391,464483..464616,464709..464847,465020..465186,465308..465477,465607..>465919)	Acanthamoeba castellanii str. Neff	14920575
ACA1_201030	mRNA	ACA1_201030	NW_004457538.1	466208	468100	R	ACA1_201030	complement(join(<466208..466234,466284..466450,466626..466776,466906..466956,467020..467069,467206..467280,467414..467487,467589..467735,467827..467941,468055..>468100))	Acanthamoeba castellanii str. Neff	14920576
ACA1_201040	mRNA	ACA1_201040	NW_004457538.1	469472	471302	D	ACA1_201040	join(<469472..469480,469631..470679,470753..>471302)	Acanthamoeba castellanii str. Neff	14920577
ACA1_201050	mRNA	ACA1_201050	NW_004457538.1	472361	472975	R	ACA1_201050	complement(join(<472361..472435,472565..>472975))	Acanthamoeba castellanii str. Neff	14920578
ACA1_201060	mRNA	ACA1_201060	NW_004457538.1	473252	474322	D	ACA1_201060	join(<473252..473509,473547..473725,473800..>474322)	Acanthamoeba castellanii str. Neff	14920579
ACA1_201070	mRNA	ACA1_201070	NW_004457538.1	476204	476629	R	ACA1_201070	complement(<476204..>476629)	Acanthamoeba castellanii str. Neff	14920580
ACA1_201080	mRNA	ACA1_201080	NW_004457538.1	477522	477947	R	ACA1_201080	complement(<477522..>477947)	Acanthamoeba castellanii str. Neff	14920581
ACA1_201090	mRNA	ACA1_201090	NW_004457538.1	479397	479822	R	ACA1_201090	complement(<479397..>479822)	Acanthamoeba castellanii str. Neff	14920582
ACA1_201100	mRNA	ACA1_201100	NW_004457538.1	480096	480676	R	ACA1_201100	complement(join(<480096..480387,480411..>480676))	Acanthamoeba castellanii str. Neff	14920583
ACA1_201110	mRNA	ACA1_201110	NW_004457538.1	481776	482510	R	ACA1_201110	complement(join(<481776..481835,482055..482129,482400..>482510))	Acanthamoeba castellanii str. Neff	14920584
ACA1_201120	mRNA	ACA1_201120	NW_004457538.1	483763	484082	R	ACA1_201120	complement(join(<483763..483948,484026..>484082))	Acanthamoeba castellanii str. Neff	14920585
ACA1_201130	mRNA	ACA1_201130	NW_004457538.1	484682	488008	D	ACA1_201130	join(<484682..484734,484859..485624,485711..485854,485936..486020,486196..486280,486361..486444,486529..486653,486744..486860,487226..487728,487844..>488008)	Acanthamoeba castellanii str. Neff	14920586
ACA1_201140	mRNA	ACA1_201140	NW_004457538.1	489798	490751	R	ACA1_201140	complement(join(<489798..489861,489967..490151,490227..490328,490443..>490751))	Acanthamoeba castellanii str. Neff	14920587
ACA1_201160	mRNA	ACA1_201160	NW_004457538.1	492715	497030	R	ACA1_201160	complement(join(<492715..492777,492867..492964,493085..493183,493325..493453,493538..493597,493690..493863,493985..494075,494184..494375,494481..494652,494741..494805,494900..494971,495089..495170,495254..495353,495619..495733,495825..495884,496005..496072,496289..>497030))	Acanthamoeba castellanii str. Neff	14920588
ACA1_201170	mRNA	ACA1_201170	NW_004457538.1	498230	499601	D	ACA1_201170	join(<498230..498391,498571..498888,499011..499186,499298..499460,499569..>499601)	Acanthamoeba castellanii str. Neff	14920590
ACA1_201180	mRNA	ACA1_201180	NW_004457538.1	499840	501601	R	ACA1_201180	complement(join(<499840..500009,500088..500184,500269..500377,500480..500581,500703..500823,500954..501021,501311..501386,501466..>501601))	Acanthamoeba castellanii str. Neff	14920591
ACA1_201190	mRNA	ACA1_201190	NW_004457538.1	502097	503365	D	ACA1_201190	join(<502097..502196,502289..502350,502417..502456,502547..502617,502778..502930,503081..>503365)	Acanthamoeba castellanii str. Neff	14920592
ACA1_201200	mRNA	ACA1_201200	NW_004457538.1	503471	505806	D	ACA1_201200	join(<503471..503623,503707..503819,503899..503978,504037..504188,504245..504448,504523..504676,504747..504845,504941..505066,505172..505354,505490..>505806)	Acanthamoeba castellanii str. Neff	14920593
ACA1_201210	mRNA	ACA1_201210	NW_004457538.1	506501	508435	R	ACA1_201210	complement(join(<506501..506878,506960..507352,507432..507779,507889..508218,508313..>508435))	Acanthamoeba castellanii str. Neff	14920594
ACA1_201220	mRNA	ACA1_201220	NW_004457538.1	509757	511337	D	ACA1_201220	join(<509757..509977,510031..510646,510975..511077,511222..>511337)	Acanthamoeba castellanii str. Neff	14920595
ACA1_201330	mRNA	ACA1_201330	NW_004457538.1	512146	512977	D	ACA1_201330	join(<512146..512279,512355..512760,512834..>512977)	Acanthamoeba castellanii str. Neff	14920596
ACA1_201340	mRNA	ACA1_201340	NW_004457538.1	513771	528630	R	ACA1_201340	complement(join(<513771..513968,514048..514332,514406..514543,514658..514755,514855..515082,515231..515382,515478..515619,515723..515804,515895..515965,516056..516188,516277..516602,516696..516783,516867..516953,517015..517079,517160..517239,517362..517515,517599..517688,517758..517830,517923..518029,518145..518386,518564..518796,518860..519498,519591..519992,520071..520232,520310..520588,520669..520865,520936..521181,521298..521560,521681..521909,521990..522260,522394..522528,522650..522829,522955..523308,523391..523484,523591..523706,523776..523841,523917..524100,524399..524616,524706..524852,524965..525100,525182..525287,525396..525780,525911..526027,526115..526388,526553..526689,526779..526831,526902..526968,527049..527218,527373..527481,527575..527684,527786..527865,527965..528087,528186..528267,528522..>528630))	Acanthamoeba castellanii str. Neff	14920597
ACA1_201350	mRNA	ACA1_201350	NW_004457538.1	528936	529598	R	ACA1_201350	complement(<528936..>529598)	Acanthamoeba castellanii str. Neff	14920598
ACA1_201360	mRNA	ACA1_201360	NW_004457538.1	529830	531891	R	ACA1_201360	complement(join(<529830..529944,530194..530272,530425..530555,530591..530840,530911..531001,531081..531245,531352..531445,531761..>531891))	Acanthamoeba castellanii str. Neff	14920599
ACA1_201370	mRNA	ACA1_201370	NW_004457538.1	532125	536713	D	ACA1_201370	join(<532125..532451,532582..533064,533227..533613,533687..533857,533929..534065,534149..534341,534422..534499,534585..534925,535007..535095,535230..535359,535485..535622,535724..535860,535941..536030,536109..536472,536548..>536713)	Acanthamoeba castellanii str. Neff	14920600
ACA1_201380	mRNA	ACA1_201380	NW_004457538.1	538047	538914	R	ACA1_201380	complement(join(<538047..538280,538363..>538914))	Acanthamoeba castellanii str. Neff	14920601
ACA1_201390	mRNA	ACA1_201390	NW_004457538.1	539661	542279	R	ACA1_201390	complement(join(<539661..539728,539815..539986,540070..540405,540539..540745,540836..541291,541369..541539,541641..541740,541804..541913,542010..>542279))	Acanthamoeba castellanii str. Neff	14920602
ACA1_201400	mRNA	ACA1_201400	NW_004457538.1	542964	544410	D	ACA1_201400	join(<542964..543101,543194..543440,543519..543628,543714..543939,544034..544206,544291..>544410)	Acanthamoeba castellanii str. Neff	14920603
ACA1_201410	mRNA	ACA1_201410	NW_004457538.1	546592	547463	R	ACA1_201410	complement(join(<546592..546759,546786..546952,547010..547178,547252..547340,547424..>547463))	Acanthamoeba castellanii str. Neff	14920604
ACA1_201420	mRNA	ACA1_201420	NW_004457538.1	547696	548314	D	ACA1_201420	join(<547696..547720,547830..>548314)	Acanthamoeba castellanii str. Neff	14920605
ACA1_201430	mRNA	ACA1_201430	NW_004457538.1	549572	550239	D	ACA1_201430	join(<549572..549669,549726..>550239)	Acanthamoeba castellanii str. Neff	14920606
ACA1_201440	mRNA	ACA1_201440	NW_004457538.1	551696	553226	R	ACA1_201440	complement(join(<551696..552402,552472..552628,552846..>553226))	Acanthamoeba castellanii str. Neff	14920607
ACA1_201450	mRNA	ACA1_201450	NW_004457538.1	553549	554547	D	ACA1_201450	join(<553549..553615,553692..553769,553886..553995,554103..554229,554293..554397,554489..>554547)	Acanthamoeba castellanii str. Neff	14920608
ACA1_201460	mRNA	ACA1_201460	NW_004457538.1	554724	558074	R	ACA1_201460	complement(join(<554724..554864,554974..555180,555261..555386,555462..555598,555682..555755,555854..556173,556216..556756,556861..556991,557076..557100,557208..557302,557385..557530,557671..557798,557929..>558074))	Acanthamoeba castellanii str. Neff	14920609
ACA1_201470	mRNA	ACA1_201470	NW_004457538.1	558767	560154	R	ACA1_201470	complement(join(<558767..558877,558951..559037,559126..559304,559405..559482,559573..559589,559681..559727,559834..559854,559935..560005,560115..>560154))	Acanthamoeba castellanii str. Neff	14920610
ACA1_201480	mRNA	ACA1_201480	NW_004457538.1	560710	562160	D	ACA1_201480	join(<560710..560737,560808..561034,561100..561472,561543..561811,561882..>562160)	Acanthamoeba castellanii str. Neff	14920611
ACA1_201490	mRNA	ACA1_201490	NW_004457538.1	563823	572622	D	ACA1_201490	join(<563823..563840,563951..564032,564119..564173,564275..564436,564527..564577,564678..564749,564872..564954,565035..565105,565203..565305,565400..565569,565702..565770,565869..565939,566050..566108,566193..566330,566424..566455,566766..566922,567089..567164,567233..567321,567332..567491,567509..567615,567698..567909,568093..568292,568423..568560,568841..568980,569098..569450,569558..569665,569744..570145,570222..570314,570479..570715,570785..570859,570955..571043,571116..571205,571287..571369,571475..571523,571589..571673,571739..571852,571962..572037,572134..572184,572363..>572622)	Acanthamoeba castellanii str. Neff	14920612
ACA1_201500	mRNA	ACA1_201500	NW_004457538.1	573242	575132	D	ACA1_201500	join(<573242..573247,573310..573617,573732..573793,573916..574001,574093..574165,574254..574370,574459..574587,574666..>575132)	Acanthamoeba castellanii str. Neff	14920613
ACA1_201510	mRNA	ACA1_201510	NW_004457538.1	575252	578365	D	ACA1_201510	join(<575252..575344,575437..575481,575553..575627,575723..575885,575993..576113,576178..576248,576350..576475,576582..576658,576748..576854,576955..577042,577155..577414,577495..577546,577643..577726,577802..577863,577924..577999,578091..578151,578256..>578365)	Acanthamoeba castellanii str. Neff	14920614
ACA1_201520	mRNA	ACA1_201520	NW_004457538.1	578615	579060	R	ACA1_201520	complement(join(<578615..578701,578826..578918,579013..>579060))	Acanthamoeba castellanii str. Neff	14920615
ACA1_201530	mRNA	ACA1_201530	NW_004457538.1	579444	582588	D	ACA1_201530	join(<579444..579586,579671..579717,579783..579835,579976..580123,580230..580516,580640..580704,580837..581079,581177..581366,581446..>582588)	Acanthamoeba castellanii str. Neff	14920616
ACA1_201540	mRNA	ACA1_201540	NW_004457538.1	582630	584521	R	ACA1_201540	complement(join(<582630..582842,582984..583132,583236..583374,583539..583654,583756..583953,584033..584072,584180..>584521))	Acanthamoeba castellanii str. Neff	14920617
ACA1_201550	mRNA	ACA1_201550	NW_004457538.1	585308	585949	D	ACA1_201550	join(<585308..585427,585464..>585949)	Acanthamoeba castellanii str. Neff	14920618
ACA1_201560	mRNA	ACA1_201560	NW_004457538.1	586451	591130	R	ACA1_201560	complement(join(<586451..586592,586692..586822,586884..586950,587047..587241,587349..587518,587618..587648,587703..587776,587853..588552,588664..588751,588829..588921,589001..589104,589197..589342,589408..589532,589615..589723,589800..589884,590003..590452,590534..590678,590791..590955,591040..>591130))	Acanthamoeba castellanii str. Neff	14920619
ACA1_201570	mRNA	ACA1_201570	NW_004457538.1	591322	592679	R	ACA1_201570	complement(join(<591322..591340,591375..591447,591518..591695,591788..591942,592031..592146,592360..>592679))	Acanthamoeba castellanii str. Neff	14920620
ACA1_201580	mRNA	ACA1_201580	NW_004457538.1	593466	595213	D	ACA1_201580	join(<593466..593478,593645..593773,593895..593972,594077..594293,594375..594758,594854..595040,595133..>595213)	Acanthamoeba castellanii str. Neff	14920621
ACA1_201590	mRNA	ACA1_201590	NW_004457538.1	595242	596454	R	ACA1_201590	complement(join(<595242..595597,595799..596008,596081..596202,596276..>596454))	Acanthamoeba castellanii str. Neff	14920622
ACA1_201600	mRNA	ACA1_201600	NW_004457538.1	596471	597334	R	ACA1_201600	complement(join(<596471..596713,596828..>597334))	Acanthamoeba castellanii str. Neff	14920623
ACA1_201610	mRNA	ACA1_201610	NW_004457538.1	597527	599712	D	ACA1_201610	join(<597527..597589,597691..597728,597824..597939,598098..598184,598250..598341,598471..598521,598549..598709,598817..598925,599015..599146,599264..599360,599439..599543,599624..>599712)	Acanthamoeba castellanii str. Neff	14920624
ACA1_201620	mRNA	ACA1_201620	NW_004457538.1	600478	606379	R	ACA1_201620	complement(join(<600478..600524,600660..600760,600880..601040,601135..601235,601324..601421,601598..601842,601934..602284,602395..602454,602536..602639,602742..602841,602950..603063,603133..603227,603312..603371,603496..603580,603670..603751,603876..603968,604035..604302,604428..604519,604603..604706,604795..604861,604965..605084,605157..605249,605338..605579,605663..605764,605900..605984,606057..>606379))	Acanthamoeba castellanii str. Neff	14920625
ACA1_201630	mRNA	ACA1_201630	NW_004457538.1	606552	607007	D	ACA1_201630	join(<606552..606714,606811..>607007)	Acanthamoeba castellanii str. Neff	14920626
ACA1_201640	mRNA	ACA1_201640	NW_004457538.1	607503	608468	D	ACA1_201640	join(<607503..607671,607760..607878,607973..608018,608107..>608468)	Acanthamoeba castellanii str. Neff	14920627
ACA1_201650	mRNA	ACA1_201650	NW_004457538.1	608649	609994	R	ACA1_201650	complement(join(<608649..609141,609218..609404,609480..609590,609684..609828,609902..>609994))	Acanthamoeba castellanii str. Neff	14920628
ACA1_201660	mRNA	ACA1_201660	NW_004457538.1	610223	612332	R	ACA1_201660	complement(join(<610223..610501,610660..610858,610940..611154,611205..>612332))	Acanthamoeba castellanii str. Neff	14920629
ACA1_201670	mRNA	ACA1_201670	NW_004457538.1	612502	614081	R	ACA1_201670	complement(join(<612502..612678,612792..612893,612975..613092,613173..613273,613347..613441,613538..613667,613775..613835,613927..613976,614061..>614081))	Acanthamoeba castellanii str. Neff	14920630
ACA1_261750	mRNA	ACA1_261750	NW_004457532.1	97	5136	D	ACA1_261750	join(<97..203,363..451,651..803,868..966,1025..1138,1203..1391,1491..1589,1655..1867,1942..2058,2129..2191,2270..2556,2611..>5136)	Acanthamoeba castellanii str. Neff	14920369
ACA1_261860	mRNA	ACA1_261860	NW_004457532.1	5690	6559	D	ACA1_261860	join(<5690..6285,6379..>6559)	Acanthamoeba castellanii str. Neff	14920402
ACA1_261970	mRNA	ACA1_261970	NW_004457532.1	9385	10694	R	ACA1_261970	complement(join(<9385..9418,9452..9639,9744..9897,9998..10113,10224..10532,10626..>10694))	Acanthamoeba castellanii str. Neff	14920391
ACA1_261980	mRNA	ACA1_261980	NW_004457532.1	11198	12817	D	ACA1_261980	join(<11198..11344,11423..11551,11690..11789,11869..12145,12225..12361,12473..12567,12662..>12817)	Acanthamoeba castellanii str. Neff	14920392
ACA1_261990	mRNA	ACA1_261990	NW_004457532.1	12914	14003	D	ACA1_261990	join(<12914..13301,13312..13400,13662..13790,13869..>14003)	Acanthamoeba castellanii str. Neff	14920393
ACA1_262100	mRNA	ACA1_262100	NW_004457532.1	14116	16836	D	ACA1_262100	join(<14116..14286,14358..14486,16144..>16836)	Acanthamoeba castellanii str. Neff	14920394
ACA1_262210	mRNA	ACA1_262210	NW_004457532.1	16994	25429	R	ACA1_262210	complement(join(<16994..17258,17354..17504,17604..17723,17856..17975,18083..18256,18361..19369,19487..19589,19604..19995,20100..20435,20505..20623,20711..20987,21085..21176,21273..21473,21564..21682,21776..21885,21962..22104,22167..22715,22807..22882,22967..23344,23416..23729,23831..24179,24242..24466,24560..24889,24982..25114,25248..>25429))	Acanthamoeba castellanii str. Neff	14920395
ACA1_262320	mRNA	ACA1_262320	NW_004457532.1	25807	27169	R	ACA1_262320	complement(join(<25807..26028,26191..26346,26437..26600,26738..26924,27035..>27169))	Acanthamoeba castellanii str. Neff	14920396
ACA1_262330	mRNA	ACA1_262330	NW_004457532.1	27708	31488	D	ACA1_262330	join(<27708..27771,27927..28038,28136..28205,28376..28458,28537..28651,28749..28859,28944..29007,29105..29208,29269..29355,29452..29727,29813..29942,30016..30177,30254..30378,30459..30596,30685..31356,31423..>31488)	Acanthamoeba castellanii str. Neff	14920397
ACA1_262340	mRNA	ACA1_262340	NW_004457532.1	31707	32334	R	ACA1_262340	complement(join(<31707..31903,32109..>32334))	Acanthamoeba castellanii str. Neff	14920398
ACA1_262350	mRNA	ACA1_262350	NW_004457532.1	32592	35574	D	ACA1_262350	join(<32592..32667,32738..32800,32874..32990,33085..33229,33500..33679,33781..33969,34044..34103,34192..34249,34351..34408,34475..34569,34653..34710,34845..34981,35029..35269,35367..35433,35508..>35574)	Acanthamoeba castellanii str. Neff	14920399
ACA1_262360	mRNA	ACA1_262360	NW_004457532.1	35808	37687	R	ACA1_262360	complement(join(<35808..35985,36133..36396,36509..36630,36765..36839,36920..37062,37153..37337,37530..>37687))	Acanthamoeba castellanii str. Neff	14920400
ACA1_262370	mRNA	ACA1_262370	NW_004457532.1	37879	39112	D	ACA1_262370	join(<37879..38179,38260..38387,38478..38621,38721..38927,39014..>39112)	Acanthamoeba castellanii str. Neff	14920401
ACA1_262380	mRNA	ACA1_262380	NW_004457532.1	39284	40045	R	ACA1_262380	complement(<39284..>40045)	Acanthamoeba castellanii str. Neff	14920370
ACA1_262390	mRNA	ACA1_262390	NW_004457532.1	40160	42904	R	ACA1_262390	complement(join(<40160..40398,40464..40586,40611..40671,40693..40851,40938..41075,41169..41205,41240..41295,41413..41531,41639..41695,41792..42037,42088..42178,42259..42328,42449..42508,42597..42679,42752..>42904))	Acanthamoeba castellanii str. Neff	14920371
ACA1_262400	mRNA	ACA1_262400	NW_004457532.1	43047	44926	D	ACA1_262400	join(<43047..43217,43303..43369,43470..43571,43672..43768,43851..43977,44094..44229,44341..44430,44530..44605,44695..44793,44884..>44926)	Acanthamoeba castellanii str. Neff	14920372
ACA1_262410	mRNA	ACA1_262410	NW_004457532.1	45682	51571	D	ACA1_262410	join(<45682..45809,46050..46174,46295..47115,47198..47346,47464..47615,47693..47938,48040..49490,49592..>51571)	Acanthamoeba castellanii str. Neff	14920373
ACA1_262520	mRNA	ACA1_262520	NW_004457532.1	54346	54852	R	ACA1_262520	complement(join(<54346..54363,54544..54664,54707..>54852))	Acanthamoeba castellanii str. Neff	14920374
ACA1_262530	mRNA	ACA1_262530	NW_004457532.1	55169	56256	D	ACA1_262530	join(<55169..55300,55441..>56256)	Acanthamoeba castellanii str. Neff	14920375
ACA1_262540	mRNA	ACA1_262540	NW_004457532.1	56442	58886	R	ACA1_262540	complement(join(<56442..56701,56832..57510,57602..58354,58440..>58886))	Acanthamoeba castellanii str. Neff	14920376
ACA1_262550	mRNA	ACA1_262550	NW_004457532.1	59051	60418	D	ACA1_262550	join(<59051..59545,59665..59814,59917..60063,60143..60248,60342..>60418)	Acanthamoeba castellanii str. Neff	14920377
ACA1_262660	mRNA	ACA1_262660	NW_004457532.1	61263	63240	R	ACA1_262660	complement(join(<61263..61567,61627..61726,61799..61858,61963..62187,62283..62296,62628..62848,62939..63048,63157..>63240))	Acanthamoeba castellanii str. Neff	14920378
ACA1_262770	mRNA	ACA1_262770	NW_004457532.1	63415	66169	D	ACA1_262770	join(<63415..63511,63585..63640,63711..63768,63832..65207,65252..65702,65883..>66169)	Acanthamoeba castellanii str. Neff	14920379
ACA1_262890	mRNA	ACA1_262890	NW_004457532.1	68341	68810	R	ACA1_262890	complement(join(<68341..68438,68591..>68810))	Acanthamoeba castellanii str. Neff	14920381
ACA1_263000	mRNA	ACA1_263000	NW_004457532.1	70489	73269	R	ACA1_263000	complement(join(<70489..70579,70685..70717,70738..70798,70881..70950,71017..71144,71240..71357,71435..71536,71608..71784,71845..71981,72054..72172,72238..72331,72416..72550,72654..72908,73050..>73269))	Acanthamoeba castellanii str. Neff	14920382
ACA1_263010	mRNA	ACA1_263010	NW_004457532.1	74657	75289	D	ACA1_263010	<74657..>75289	Acanthamoeba castellanii str. Neff	14920383
ACA1_263020	mRNA	ACA1_263020	NW_004457532.1	75346	80987	R	ACA1_263020	complement(join(<75346..76019,76077..76534,76595..76758,76831..76870,76947..77247,77411..77510,77585..77689,77757..77981,78079..78157,78257..78371,78459..78528,78610..78737,78824..78941,79030..79131,79202..79378,79463..79599,79672..79790,79852..79921,80011..80153,80250..80471,80552..80634,80736..80816,80925..>80987))	Acanthamoeba castellanii str. Neff	14920384
ACA1_263040	mRNA	ACA1_263040	NW_004457532.1	82193	86726	R	ACA1_263040	complement(join(<82193..82588,82605..82648,82672..82696,82757..82891,82986..83551,83660..84027,84131..84238,84472..84594,84698..84881,85012..85437,85562..85742,85861..86184,86351..86573,86674..>86726))	Acanthamoeba castellanii str. Neff	14920386
ACA1_263150	mRNA	ACA1_263150	NW_004457532.1	86882	87660	R	ACA1_263150	complement(join(<86882..86917,87148..87409,87446..>87660))	Acanthamoeba castellanii str. Neff	14920387
ACA1_263160	mRNA	ACA1_263160	NW_004457532.1	87861	89254	R	ACA1_263160	complement(join(<87861..88222,88374..88465,88596..88936,89084..>89254))	Acanthamoeba castellanii str. Neff	14920388
ACA1_263170	mRNA	ACA1_263170	NW_004457532.1	90718	92757	D	ACA1_263170	join(<90718..90748,90830..92337,92465..92511,92619..>92757)	Acanthamoeba castellanii str. Neff	14920389
ACA1_263180	mRNA	ACA1_263180	NW_004457532.1	93138	94895	D	ACA1_263180	join(<93138..93373,93526..93586,93669..93723,93856..94028,94138..94234,94362..94560,94733..>94895)	Acanthamoeba castellanii str. Neff	14920390
ACA1_263190	mRNA	ACA1_263190	NW_004457532.1	95126	98199	D	ACA1_263190	join(<95126..95208,95251..95410,95533..95697,95864..95951,96108..96271,96421..96670,96803..97132,97248..97437,97521..97629,98167..>98199)	Acanthamoeba castellanii str. Neff	14919982
ACA1_263500	mRNA	ACA1_263500	NW_004457532.1	101902	102739	D	ACA1_263500	join(<101902..102236,102697..>102739)	Acanthamoeba castellanii str. Neff	14919983
ACA1_263610	mRNA	ACA1_263610	NW_004457532.1	103927	105581	D	ACA1_263610	join(<103927..104100,104192..104388,104477..104628,104874..104974,105076..105302,105563..>105581)	Acanthamoeba castellanii str. Neff	14919984
ACA1_263820	mRNA	ACA1_263820	NW_004457532.1	107038	107560	D	ACA1_263820	join(<107038..107523,107555..>107560)	Acanthamoeba castellanii str. Neff	14919985
ACA1_263830	mRNA	ACA1_263830	NW_004457532.1	107739	108412	D	ACA1_263830	join(<107739..108202,108379..>108412)	Acanthamoeba castellanii str. Neff	14919986
ACA1_263840	mRNA	ACA1_263840	NW_004457532.1	110795	113409	R	ACA1_263840	complement(join(<110795..111110,111477..111551,111615..111760,111865..111934,112025..112130,112225..112341,112430..112526,112635..112760,112870..112969,113042..113087,113196..>113409))	Acanthamoeba castellanii str. Neff	14919987
ACA1_263850	mRNA	ACA1_263850	NW_004457532.1	113765	120642	R	ACA1_263850	complement(join(<113765..113895,113976..114078,114183..114562,114668..115123,115213..115469,115595..116260,116353..116552,116629..116787,116875..116991,117083..117178,117263..117423,117506..117713,117778..117968,118083..118150,118263..118400,118590..118673,118745..118887,118992..119097,119273..119673,119798..120044,120125..120473,120567..>120642))	Acanthamoeba castellanii str. Neff	14919988
ACA1_263860	mRNA	ACA1_263860	NW_004457532.1	121044	122986	R	ACA1_263860	complement(join(<121044..121195,121307..121449,121547..121670,121792..121872,121973..122133,122241..122757,122884..>122986))	Acanthamoeba castellanii str. Neff	14919989
ACA1_263870	mRNA	ACA1_263870	NW_004457532.1	123152	124956	R	ACA1_263870	complement(join(<123152..123350,123469..123582,123681..123783,123881..123953,124033..124121,124239..124317,124454..124597,124698..124823,124912..>124956))	Acanthamoeba castellanii str. Neff	14919990
ACA1_263880	mRNA	ACA1_263880	NW_004457532.1	125573	126424	D	ACA1_263880	<125573..>126424	Acanthamoeba castellanii str. Neff	14919991
ACA1_263890	mRNA	ACA1_263890	NW_004457532.1	126641	127623	R	ACA1_263890	complement(join(<126641..126878,126975..127106,127202..>127623))	Acanthamoeba castellanii str. Neff	14919992
ACA1_263900	mRNA	ACA1_263900	NW_004457532.1	127729	131508	R	ACA1_263900	complement(join(<127729..127997,128078..128237,128356..128517,128582..128660,128752..128917,129037..131015,131063..>131508))	Acanthamoeba castellanii str. Neff	14919993
ACA1_263910	mRNA	ACA1_263910	NW_004457532.1	132103	133493	R	ACA1_263910	complement(join(<132103..132184,132277..132323,132465..132560,132647..132769,132845..132933,133046..133142,133205..133287,133356..133422,133485..>133493))	Acanthamoeba castellanii str. Neff	14919994
ACA1_263920	mRNA	ACA1_263920	NW_004457532.1	133915	135292	D	ACA1_263920	join(<133915..134034,134126..134552,134642..134751,134817..134842,134865..134913,135041..135109,135206..>135292)	Acanthamoeba castellanii str. Neff	14919995
ACA1_263930	mRNA	ACA1_263930	NW_004457532.1	135495	136449	R	ACA1_263930	complement(join(<135495..135594,135807..135927,135990..136079,136137..136220,136287..>136449))	Acanthamoeba castellanii str. Neff	14919996
ACA1_263940	mRNA	ACA1_263940	NW_004457532.1	136652	139685	R	ACA1_263940	complement(join(<136652..136707,136753..137338,137421..137615,137690..137956,138028..138179,138251..138369,138450..138529,138591..139003,139098..139261,139353..139487,139561..>139685))	Acanthamoeba castellanii str. Neff	14919997
ACA1_263950	mRNA	ACA1_263950	NW_004457532.1	140161	141126	R	ACA1_263950	complement(join(<140161..140348,140417..140546,140629..140681,140758..140836,140974..>141126))	Acanthamoeba castellanii str. Neff	14919998
ACA1_263960	mRNA	ACA1_263960	NW_004457532.1	141217	142566	R	ACA1_263960	complement(join(<141217..141324,141403..141463,141575..141616,141787..141980,142114..>142566))	Acanthamoeba castellanii str. Neff	14919999
ACA1_263970	mRNA	ACA1_263970	NW_004457532.1	142727	144015	D	ACA1_263970	join(<142727..142894,143136..143199,143306..143367,143477..143591,143732..143766,143849..143917,143986..>144015)	Acanthamoeba castellanii str. Neff	14920000
ACA1_263980	mRNA	ACA1_263980	NW_004457532.1	144333	146355	D	ACA1_263980	join(<144333..144419,144500..144610,144749..145741,145828..>146355)	Acanthamoeba castellanii str. Neff	14920001
ACA1_263990	mRNA	ACA1_263990	NW_004457532.1	146846	149485	R	ACA1_263990	complement(<146846..>149485)	Acanthamoeba castellanii str. Neff	14920002
ACA1_264000	mRNA	ACA1_264000	NW_004457532.1	149739	151030	R	ACA1_264000	complement(join(<149739..149917,150018..150041,150137..150363,150430..150579,150673..150751,150856..>151030))	Acanthamoeba castellanii str. Neff	14920003
ACA1_264010	mRNA	ACA1_264010	NW_004457532.1	151222	151845	D	ACA1_264010	<151222..>151845	Acanthamoeba castellanii str. Neff	14920004
ACA1_264020	mRNA	ACA1_264020	NW_004457532.1	152306	156133	D	ACA1_264020	join(<152306..152428,152601..152703,152778..152862,152966..153033,153158..153288,153395..153491,153566..153643,153746..154004,154111..154227,154318..154395,154499..154688,154781..155051,155127..155454,155560..>156133)	Acanthamoeba castellanii str. Neff	14920005
ACA1_264030	mRNA	ACA1_264030	NW_004457532.1	156625	157840	R	ACA1_264030	complement(join(<156625..156763,156832..157110,157175..157285,157351..157472,157579..157629,157703..>157840))	Acanthamoeba castellanii str. Neff	14920006
ACA1_264050	mRNA	ACA1_264050	NW_004457532.1	165231	168643	R	ACA1_264050	complement(join(<165231..165262,165330..165401,165525..165636,165713..165768,165840..165874,165982..166080,166127..166338,166408..166834,166921..167066,167152..167257,167320..167381,167467..167596,167666..167709,167779..167847,167919..168032,168105..168248,168320..168464,168558..>168643))	Acanthamoeba castellanii str. Neff	14920008
ACA1_264060	mRNA	ACA1_264060	NW_004457532.1	169307	169921	D	ACA1_264060	join(<169307..169702,169784..>169921)	Acanthamoeba castellanii str. Neff	14920009
ACA1_264070	mRNA	ACA1_264070	NW_004457532.1	170197	174220	D	ACA1_264070	join(<170197..170379,170511..170620,170686..171099,171172..171249,171357..171433,171511..171632,171728..171919,172014..172266,172338..172404,172479..172537,172635..173181,173277..173374,173453..173572,173663..173817,173901..174017,174080..>174220)	Acanthamoeba castellanii str. Neff	14920010
ACA1_264080	mRNA	ACA1_264080	NW_004457532.1	174343	175360	R	ACA1_264080	complement(join(<174343..174504,174618..174855,174939..175065,175135..>175360))	Acanthamoeba castellanii str. Neff	14920011
ACA1_264090	mRNA	ACA1_264090	NW_004457532.1	175611	185817	D	ACA1_264090	join(<175611..175751,175883..175989,176082..176165,176290..176397,176432..176543,176606..176669,176751..176764,176850..176916,176984..177087,177192..177321,177383..177557,177635..177728,177801..177973,178048..178210,178292..178559,178642..178711,178785..179014,179100..179222,179308..179683,179786..179893,180002..180164,180267..180336,180410..180557,180717..180816,180904..181038,181114..181198,181291..181380,181457..181633,181707..181806,181911..182050,182162..182291,182369..182489,182565..182710,182790..182931,183034..183079,183167..183379,183460..183770,183852..183937,184023..184149,184229..184378,184466..184670,184758..185020,185102..185426,185513..185604,185683..>185817)	Acanthamoeba castellanii str. Neff	14920012
ACA1_264100	mRNA	ACA1_264100	NW_004457532.1	186125	190317	D	ACA1_264100	join(<186125..186211,186305..186548,186644..186848,186928..187006,187128..187715,187821..188077,188164..188458,188770..188829,188906..189048,189151..189241,189344..189490,189569..189710,189801..190071,190170..>190317)	Acanthamoeba castellanii str. Neff	14920013
ACA1_264110	mRNA	ACA1_264110	NW_004457532.1	190586	192099	D	ACA1_264110	join(<190586..190607,190693..191529,191762..>192099)	Acanthamoeba castellanii str. Neff	14920014
ACA1_264120	mRNA	ACA1_264120	NW_004457532.1	192393	194915	R	ACA1_264120	complement(join(<192393..193061,193151..193318,193447..193611,193744..194015,194153..194234,194307..>194915))	Acanthamoeba castellanii str. Neff	14920015
ACA1_264130	mRNA	ACA1_264130	NW_004457532.1	195141	197188	R	ACA1_264130	complement(join(<195141..195434,195587..195679,195771..195923,196035..196219,196334..196424,196517..196663,196750..196868,196950..197085,197147..>197188))	Acanthamoeba castellanii str. Neff	14920016
ACA1_264140	mRNA	ACA1_264140	NW_004457532.1	198026	199960	D	ACA1_264140	<198026..>199960	Acanthamoeba castellanii str. Neff	14920017
ACA1_264150	mRNA	ACA1_264150	NW_004457532.1	200115	202395	R	ACA1_264150	complement(join(<200115..200414,200487..200549,200617..200738,200852..201266,201345..201585,201667..201817,201874..202087,202168..202227,202360..>202395))	Acanthamoeba castellanii str. Neff	14920018
ACA1_264160	mRNA	ACA1_264160	NW_004457532.1	202840	204030	D	ACA1_264160	join(<202840..202987,203060..203107,203185..203588,203671..>204030)	Acanthamoeba castellanii str. Neff	14920019
ACA1_264170	mRNA	ACA1_264170	NW_004457532.1	204161	205184	R	ACA1_264170	complement(join(<204161..204499,204601..204899,204962..>205184))	Acanthamoeba castellanii str. Neff	14920020
ACA1_264180	mRNA	ACA1_264180	NW_004457532.1	205951	207220	D	ACA1_264180	join(<205951..206043,206125..206427,206506..206659,206723..206798,206890..206973,207073..>207220)	Acanthamoeba castellanii str. Neff	14920021
ACA1_264190	mRNA	ACA1_264190	NW_004457532.1	207712	209150	D	ACA1_264190	join(<207712..208263,208314..>209150)	Acanthamoeba castellanii str. Neff	14920022
ACA1_264200	mRNA	ACA1_264200	NW_004457532.1	209284	210148	R	ACA1_264200	complement(join(<209284..209393,209476..209712,209792..209942,210023..>210148))	Acanthamoeba castellanii str. Neff	14920023
ACA1_264210	mRNA	ACA1_264210	NW_004457532.1	210382	212112	R	ACA1_264210	complement(<210382..>212112)	Acanthamoeba castellanii str. Neff	14920024
ACA1_264220	mRNA	ACA1_264220	NW_004457532.1	212557	214711	D	ACA1_264220	join(<212557..212956,213019..213331,213420..213501,213593..213832,213938..214016,214078..214215,214376..214500,214583..>214711)	Acanthamoeba castellanii str. Neff	14920025
ACA1_264230	mRNA	ACA1_264230	NW_004457532.1	215303	216726	D	ACA1_264230	join(<215303..215364,215518..215636,215714..215862,215953..216003,216091..216345,216502..>216726)	Acanthamoeba castellanii str. Neff	14920026
ACA1_264240	mRNA	ACA1_264240	NW_004457532.1	216873	218945	R	ACA1_264240	complement(join(<216873..216951,217030..217120,217229..218574,218588..218738,218828..>218945))	Acanthamoeba castellanii str. Neff	14920027
ACA1_264250	mRNA	ACA1_264250	NW_004457532.1	220076	222333	D	ACA1_264250	join(<220076..220157,220273..220347,220609..220769,220836..221101,221182..221520,221652..>222333)	Acanthamoeba castellanii str. Neff	14920028
ACA1_264260	mRNA	ACA1_264260	NW_004457532.1	222886	226088	D	ACA1_264260	join(<222886..222985,223078..223177,223301..223382,223521..223610,223703..223882,224050..224121,224247..224347,224475..224616,224708..224829,224924..225027,225134..225542,225649..225682,225699..225853,225968..>226088)	Acanthamoeba castellanii str. Neff	14920029
ACA1_264270	mRNA	ACA1_264270	NW_004457532.1	225944	228014	R	ACA1_264270	complement(join(<225944..226332,226433..226686,226776..227158,227254..227336,227518..227620,227702..227768,227865..>228014))	Acanthamoeba castellanii str. Neff	14920030
ACA1_264280	mRNA	ACA1_264280	NW_004457532.1	228276	229002	R	ACA1_264280	complement(join(<228276..228394,228481..228606,228723..>229002))	Acanthamoeba castellanii str. Neff	14920031
ACA1_264290	mRNA	ACA1_264290	NW_004457532.1	229328	231028	R	ACA1_264290	complement(join(<229328..229423,229532..229608,229696..229822,229917..229995,230074..230134,230232..230333,230426..230542,230624..230670,230747..230901,230990..>231028))	Acanthamoeba castellanii str. Neff	14920032
ACA1_264300	mRNA	ACA1_264300	NW_004457532.1	231280	231714	R	ACA1_264300	complement(<231280..>231714)	Acanthamoeba castellanii str. Neff	14920033
ACA1_264320	mRNA	ACA1_264320	NW_004457532.1	235001	239466	R	ACA1_264320	complement(join(<235001..235282,235368..235487,235566..235736,235839..235944,236013..236209,236282..236376,236466..236693,236787..236866,236976..237124,237235..238962,239189..239246,239321..>239466))	Acanthamoeba castellanii str. Neff	14920035
ACA1_264330	mRNA	ACA1_264330	NW_004457532.1	239760	241258	D	ACA1_264330	join(<239760..240115,240192..240267,240381..240438,240536..240681,240785..>241258)	Acanthamoeba castellanii str. Neff	14920036
ACA1_264340	mRNA	ACA1_264340	NW_004457532.1	241716	243979	D	ACA1_264340	join(<241716..242789,242908..243042,243131..243304,243401..243712,243791..>243979)	Acanthamoeba castellanii str. Neff	14920037
ACA1_264360	mRNA	ACA1_264360	NW_004457532.1	245722	250191	D	ACA1_264360	join(<245722..245838,245906..246051,246116..246407,246519..246726,246796..246833,246988..247110,247194..247246,247339..247574,247663..247829,247921..247982,248041..248119,248194..248365,248434..248513,248590..248808,248894..248999,249100..249206,249297..249483,249543..249632,249705..250014,250080..>250191)	Acanthamoeba castellanii str. Neff	14920039
ACA1_264370	mRNA	ACA1_264370	NW_004457532.1	250418	254700	D	ACA1_264370	join(<250418..250439,250591..251805,251896..252378,252464..252604,252696..252859,252928..253050,253156..253221,253374..253472,253592..253750,253834..253950,254052..254149,254260..254365,254475..254604,254675..>254700)	Acanthamoeba castellanii str. Neff	14920040
ACA1_264380	mRNA	ACA1_264380	NW_004457532.1	254986	256432	R	ACA1_264380	complement(join(<254986..255049,255113..255225,255322..255387,255478..255576,255667..255714,255792..255988,256088..256205,256289..>256432))	Acanthamoeba castellanii str. Neff	14920041
ACA1_264390	mRNA	ACA1_264390	NW_004457532.1	256590	257611	D	ACA1_264390	join(<256590..256967,256996..257107,257205..257275,257355..257473,257581..>257611)	Acanthamoeba castellanii str. Neff	14920042
ACA1_264400	mRNA	ACA1_264400	NW_004457532.1	258233	261164	D	ACA1_264400	join(<258233..258258,258361..258495,258579..258728,258838..258966,259062..259517,259647..260254,260414..260660,260774..260944,261017..>261164)	Acanthamoeba castellanii str. Neff	14920043
ACA1_264410	mRNA	ACA1_264410	NW_004457532.1	261254	261839	R	ACA1_264410	complement(join(<261254..261370,261454..261548,261617..>261839))	Acanthamoeba castellanii str. Neff	14920044
ACA1_264420	mRNA	ACA1_264420	NW_004457532.1	262036	265319	D	ACA1_264420	join(<262036..262715,262890..263040,263131..263229,263378..263561,263661..263759,263861..263978,264064..264404,264475..264654,264760..264898,264995..265093,265169..>265319)	Acanthamoeba castellanii str. Neff	14920045
ACA1_264440	mRNA	ACA1_264440	NW_004457532.1	287121	288686	D	ACA1_264440	join(<287121..287226,287291..287401,287478..287523,287590..287646,287715..287799,287881..287964,288022..288132,288213..288362,288438..>288686)	Acanthamoeba castellanii str. Neff	14920047
ACA1_264450	mRNA	ACA1_264450	NW_004457532.1	289061	293458	D	ACA1_264450	join(<289061..289137,289182..289462,289546..289871,289977..290093,290158..290303,290427..290484,290567..290675,290741..290836,290911..291122,291189..291568,291647..291780,291842..291925,292033..292190,292279..292348,292433..292602,292659..292914,293007..>293458)	Acanthamoeba castellanii str. Neff	14920048
ACA1_264460	mRNA	ACA1_264460	NW_004457532.1	293633	294798	R	ACA1_264460	complement(join(<293633..293675,293833..293954,294031..294092,294172..294313,294428..294506,294623..294673,294743..>294798))	Acanthamoeba castellanii str. Neff	14920049
ACA1_264470	mRNA	ACA1_264470	NW_004457532.1	295117	295522	D	ACA1_264470	join(<295117..295307,295333..295422,295477..>295522)	Acanthamoeba castellanii str. Neff	14920050
ACA1_264480	mRNA	ACA1_264480	NW_004457532.1	301864	302672	D	ACA1_264480	join(<301864..301941,302012..302068,302392..302487,302568..>302672)	Acanthamoeba castellanii str. Neff	14920051
ACA1_264490	mRNA	ACA1_264490	NW_004457532.1	304468	305263	D	ACA1_264490	join(<304468..304688,304763..305121,305220..>305263)	Acanthamoeba castellanii str. Neff	14920052
ACA1_264500	mRNA	ACA1_264500	NW_004457532.1	305405	306085	R	ACA1_264500	complement(<305405..>306085)	Acanthamoeba castellanii str. Neff	14920053
ACA1_264510	mRNA	ACA1_264510	NW_004457532.1	306494	309727	R	ACA1_264510	complement(join(<306494..306505,306601..308162,308287..>309727))	Acanthamoeba castellanii str. Neff	14920054
ACA1_264520	mRNA	ACA1_264520	NW_004457532.1	310178	311737	R	ACA1_264520	complement(join(<310178..310205,310374..310437,310519..310619,310690..310768,310846..310968,311060..311158,311269..>311737))	Acanthamoeba castellanii str. Neff	14920055
ACA1_264530	mRNA	ACA1_264530	NW_004457532.1	312689	313362	D	ACA1_264530	join(<312689..312986,313001..>313362)	Acanthamoeba castellanii str. Neff	14920056
ACA1_264540	mRNA	ACA1_264540	NW_004457532.1	313537	317742	R	ACA1_264540	complement(join(<313537..313730,313831..313984,314097..314255,314353..314451,314534..314668,314750..315030,315152..315268,315418..315479,315578..315678,315776..315865,315944..316098,316182..316469,316560..316709,316801..317022,317175..317573,317700..>317742))	Acanthamoeba castellanii str. Neff	14920057
ACA1_264550	mRNA	ACA1_264550	NW_004457532.1	317886	319897	D	ACA1_264550	join(<317886..317925,318008..318285,318376..318466,318588..318678,318760..318940,319034..319147,319253..319403,319498..319649,319733..>319897)	Acanthamoeba castellanii str. Neff	14920058
ACA1_264560	mRNA	ACA1_264560	NW_004457532.1	320055	324117	R	ACA1_264560	complement(join(<320055..320220,320345..320944,321024..321117,321201..321283,321575..321761,321855..321926,322056..322206,322295..322339,322477..322565,322637..322716,322804..322976,323072..323171,323251..323349,323436..323551,323695..323795,323889..>324117))	Acanthamoeba castellanii str. Neff	14920059
ACA1_264570	mRNA	ACA1_264570	NW_004457532.1	324830	327128	D	ACA1_264570	join(<324830..324878,324964..325071,325165..325288,325423..325520,325599..325702,325805..325845,325906..326023,326108..326202,326279..326438,326517..326621,326700..326906,326979..>327128)	Acanthamoeba castellanii str. Neff	14920060
ACA1_264580	mRNA	ACA1_264580	NW_004457532.1	327302	329018	R	ACA1_264580	complement(join(<327302..327606,327686..327863,327945..328051,328127..328238,328320..328407,328486..328577,328651..328679,328749..328867,328936..>329018))	Acanthamoeba castellanii str. Neff	14920061
ACA1_264590	mRNA	ACA1_264590	NW_004457532.1	329194	330268	R	ACA1_264590	complement(join(<329194..329262,329328..329529,329613..329734,329802..329852,329919..330008,330068..>330268))	Acanthamoeba castellanii str. Neff	14920062
ACA1_264600	mRNA	ACA1_264600	NW_004457532.1	330590	335568	D	ACA1_264600	join(<330590..330599,330668..331015,331120..331196,331221..331287,331377..331525,331620..331743,331852..331977,332082..332282,332376..332538,332565..332739,332883..333024,333098..333226,333314..333491,333562..333650,333732..333858,333897..334053,334143..334277,334359..334508,334744..>335568)	Acanthamoeba castellanii str. Neff	14920063
ACA1_264610	mRNA	ACA1_264610	NW_004457532.1	335666	337491	R	ACA1_264610	complement(join(<335666..335846,335953..336100,336221..336400,336494..336586,336678..336797,336937..337048,337180..>337491))	Acanthamoeba castellanii str. Neff	14920064
ACA1_264620	mRNA	ACA1_264620	NW_004457532.1	337812	340937	D	ACA1_264620	join(<337812..337985,338034..>340937)	Acanthamoeba castellanii str. Neff	14920065
ACA1_264630	mRNA	ACA1_264630	NW_004457532.1	341092	342010	D	ACA1_264630	join(<341092..341255,341353..341467,341561..341711,341812..341880,341958..>342010)	Acanthamoeba castellanii str. Neff	14920066
ACA1_264640	mRNA	ACA1_264640	NW_004457532.1	342265	349745	D	ACA1_264640	join(<342265..342559,342630..342839,342917..343029,343133..343327,343340..343408,343502..343607,343700..343806,343905..344006,344096..344220,344382..344483,344555..344675,344770..344910,344987..345063,345156..345284,345353..345536,345615..346052,346108..346282,346376..346452,346553..346818,346891..346999,347090..347164,347240..348299,348345..348474,348585..348702,348793..348908,348980..349148,349231..349343,349430..>349745)	Acanthamoeba castellanii str. Neff	14920067
ACA1_264650	mRNA	ACA1_264650	NW_004457532.1	349829	351982	D	ACA1_264650	join(<349829..349899,349991..350739,350818..350893,350973..351084,351190..351303,351386..>351982)	Acanthamoeba castellanii str. Neff	14920068
ACA1_264660	mRNA	ACA1_264660	NW_004457532.1	352495	354770	D	ACA1_264660	join(<352495..352611,352783..352913,353019..353103,353328..353456,353538..353769,353859..354013,354135..>354770)	Acanthamoeba castellanii str. Neff	14920069
ACA1_264670	mRNA	ACA1_264670	NW_004457532.1	354995	355387	R	ACA1_264670	complement(<354995..>355387)	Acanthamoeba castellanii str. Neff	14920070
ACA1_264680	mRNA	ACA1_264680	NW_004457532.1	356040	358137	D	ACA1_264680	join(<356040..356206,356349..356495,356593..356686,356872..357026,357151..357346,357500..357996,358014..>358137)	Acanthamoeba castellanii str. Neff	14920071
ACA1_264690	mRNA	ACA1_264690	NW_004457532.1	358489	360670	D	ACA1_264690	join(<358489..358608,358709..359153,359300..359495,359610..359683,359855..360036,360173..360266,360340..360475,360532..>360670)	Acanthamoeba castellanii str. Neff	14920072
ACA1_264700	mRNA	ACA1_264700	NW_004457532.1	361208	361993	D	ACA1_264700	<361208..>361993	Acanthamoeba castellanii str. Neff	14920073
ACA1_264710	mRNA	ACA1_264710	NW_004457532.1	362551	367287	R	ACA1_264710	complement(join(<362551..362675,362782..363239,363314..363441,363512..363623,363767..363885,364032..364153,364295..364370,364466..364617,364689..364830,364937..365185,365278..365448,365493..365566,365664..365815,365921..366104,366206..366427,366513..366831,366898..367043,367110..>367287))	Acanthamoeba castellanii str. Neff	14920074
ACA1_264720	mRNA	ACA1_264720	NW_004457532.1	367666	368151	D	ACA1_264720	<367666..>368151	Acanthamoeba castellanii str. Neff	14920075
ACA1_264730	mRNA	ACA1_264730	NW_004457532.1	368261	369809	R	ACA1_264730	complement(join(<368261..368538,368615..368750,368842..368997,369083..369210,369299..369452,369564..>369809))	Acanthamoeba castellanii str. Neff	14920076
ACA1_264740	mRNA	ACA1_264740	NW_004457532.1	370640	371800	D	ACA1_264740	<370640..>371800	Acanthamoeba castellanii str. Neff	14920077
ACA1_264750	mRNA	ACA1_264750	NW_004457532.1	371978	372813	D	ACA1_264750	join(<371978..372081,372142..372281,372362..372486,372557..372624,372699..>372813)	Acanthamoeba castellanii str. Neff	14920078
ACA1_264760	mRNA	ACA1_264760	NW_004457532.1	372986	373794	D	ACA1_264760	join(<372986..373208,373270..373420,373509..>373794)	Acanthamoeba castellanii str. Neff	14920079
ACA1_264770	mRNA	ACA1_264770	NW_004457532.1	373942	375619	D	ACA1_264770	join(<373942..374161,374240..374859,374905..375018,375089..375182,375348..>375619)	Acanthamoeba castellanii str. Neff	14920080
ACA1_264780	mRNA	ACA1_264780	NW_004457532.1	376181	376480	D	ACA1_264780	<376181..>376480	Acanthamoeba castellanii str. Neff	14920081
ACA1_264790	mRNA	ACA1_264790	NW_004457532.1	377034	377246	D	ACA1_264790	<377034..>377246	Acanthamoeba castellanii str. Neff	14920082
ACA1_264800	mRNA	ACA1_264800	NW_004457532.1	377408	378716	D	ACA1_264800	join(<377408..377609,377717..377828,377932..378083,378174..378308,378392..378555,378630..>378716)	Acanthamoeba castellanii str. Neff	14920083
ACA1_264810	mRNA	ACA1_264810	NW_004457532.1	378845	380870	D	ACA1_264810	join(<378845..378948,379072..379189,379260..379403,379430..379555,379656..379779,379904..380214,380255..380269,380355..380434,380561..>380870)	Acanthamoeba castellanii str. Neff	14920084
ACA1_264820	mRNA	ACA1_264820	NW_004457532.1	380893	383441	R	ACA1_264820	complement(join(<380893..381119,381218..381486,381571..381652,381730..381888,382035..382113,382217..383287,383427..>383441))	Acanthamoeba castellanii str. Neff	14920085
ACA1_264830	mRNA	ACA1_264830	NW_004457532.1	383703	385573	R	ACA1_264830	complement(join(<383703..383845,383955..384034,384158..384290,384415..>385573))	Acanthamoeba castellanii str. Neff	14920086
ACA1_264840	mRNA	ACA1_264840	NW_004457532.1	386194	388973	R	ACA1_264840	complement(join(<386194..386204,386285..386424,386469..386620,386702..386774,386843..386981,387055..387180,387250..387540,387613..387721,387939..387981,388055..388157,388235..>388973))	Acanthamoeba castellanii str. Neff	14920087
ACA1_264850	mRNA	ACA1_264850	NW_004457532.1	389466	390377	D	ACA1_264850	join(<389466..389582,389655..389766,389858..389950,390063..390203,390280..>390377)	Acanthamoeba castellanii str. Neff	14920088
ACA1_264860	mRNA	ACA1_264860	NW_004457532.1	390470	392469	R	ACA1_264860	complement(join(<390470..390560,390668..391039,391133..>392469))	Acanthamoeba castellanii str. Neff	14920089
ACA1_264870	mRNA	ACA1_264870	NW_004457532.1	393021	393937	D	ACA1_264870	join(<393021..393143,393261..393415,393521..393648,393819..>393937)	Acanthamoeba castellanii str. Neff	14920090
ACA1_264880	mRNA	ACA1_264880	NW_004457532.1	394238	396688	D	ACA1_264880	join(<394238..394334,394438..394493,394607..394661,394751..394835,394944..395076,395213..395466,395582..395808,395914..396059,396205..396473,396577..>396688)	Acanthamoeba castellanii str. Neff	14920091
ACA1_264890	mRNA	ACA1_264890	NW_004457532.1	396781	398526	R	ACA1_264890	complement(join(<396781..397016,397117..397359,397474..397593,397702..397851,397967..398078,398159..398250,398349..>398526))	Acanthamoeba castellanii str. Neff	14920092
ACA1_264900	mRNA	ACA1_264900	NW_004457532.1	398810	399619	D	ACA1_264900	join(<398810..398954,398980..399005,399053..>399619)	Acanthamoeba castellanii str. Neff	14920093
ACA1_264910	mRNA	ACA1_264910	NW_004457532.1	400079	401538	D	ACA1_264910	join(<400079..400315,400570..400646,401041..401291,401318..>401538)	Acanthamoeba castellanii str. Neff	14920094
ACA1_264920	mRNA	ACA1_264920	NW_004457532.1	401865	408269	R	ACA1_264920	complement(join(<401865..401969,402073..402194,402282..402347,402437..402704,402845..403021,403107..404018,404104..404229,404336..404446,404507..404632,404715..404825,404916..405041,405147..405257,405353..405478,405577..405687,405790..405915,406048..406158,406246..406377,406503..406613,406699..406824,406925..407007,407134..407269,407360..407447,407530..407687,407781..408029,408216..>408269))	Acanthamoeba castellanii str. Neff	14920095
ACA1_264930	mRNA	ACA1_264930	NW_004457532.1	408674	410007	D	ACA1_264930	join(<408674..408716,408854..408985,409081..409191,409299..409624,409645..>410007)	Acanthamoeba castellanii str. Neff	14920096
ACA1_265140	mRNA	ACA1_265140	NW_004457532.1	411300	412667	R	ACA1_265140	complement(join(<411300..411413,411503..411579,411689..411754,411871..412061,412195..412356,412464..>412667))	Acanthamoeba castellanii str. Neff	14920097
ACA1_265250	mRNA	ACA1_265250	NW_004457532.1	412779	415849	D	ACA1_265250	join(<412779..412850,412958..413308,413392..413502,413593..413747,413847..414876,415034..415304,415391..415456,415538..415659,415745..>415849)	Acanthamoeba castellanii str. Neff	14920098
ACA1_265260	mRNA	ACA1_265260	NW_004457532.1	415943	416655	D	ACA1_265260	join(<415943..416110,416200..416306,416354..416422,416523..>416655)	Acanthamoeba castellanii str. Neff	14920099
ACA1_265270	mRNA	ACA1_265270	NW_004457532.1	416738	417173	D	ACA1_265270	join(<416738..416971,417066..>417173)	Acanthamoeba castellanii str. Neff	14920100
ACA1_265280	mRNA	ACA1_265280	NW_004457532.1	417693	419104	D	ACA1_265280	join(<417693..417803,417906..417980,418102..418206,418310..418415,418531..418673,418757..418869,418984..>419104)	Acanthamoeba castellanii str. Neff	14920101
ACA1_265290	mRNA	ACA1_265290	NW_004457532.1	419225	428693	R	ACA1_265290	complement(join(<419225..419299,419649..419782,419880..419993,420083..420159,420260..420325,420460..420650,420768..420929,421026..422368,422442..423017,423117..423221,423303..423435,423549..423685,423807..423914,423990..424136,424567..424749,424809..424940,425063..425191,425257..425587,425668..425876,425938..426228,426293..426418,426511..426663,426781..426918,427041..427187,427268..427417,427511..427633,427721..427849,427956..428084,428173..428293,428376..428441,428562..>428693))	Acanthamoeba castellanii str. Neff	14920102
ACA1_265300	mRNA	ACA1_265300	NW_004457532.1	428948	432699	D	ACA1_265300	join(<428948..429153,429229..429343,429428..429583,429656..429774,429850..429974,430054..430182,430260..430366,430438..430474,430606..430720,430806..430968,431044..431118,431200..431367,431438..431539,431616..431681,431746..431835,431914..431997,432057..432158,432246..432380,432444..432509,432634..>432699)	Acanthamoeba castellanii str. Neff	14920103
ACA1_265310	mRNA	ACA1_265310	NW_004457532.1	433037	436630	D	ACA1_265310	join(<433037..433077,433257..433415,433478..433595,433665..433735,433857..433953,434094..434474,434572..434759,434850..434929,435043..435221,435326..435621,435740..435934,436029..436108,436186..436239,436331..436452,436598..>436630)	Acanthamoeba castellanii str. Neff	14920104
ACA1_265320	mRNA	ACA1_265320	NW_004457532.1	437006	439039	R	ACA1_265320	complement(join(<437006..437102,437174..437450,437484..437573,437671..437730,437817..437892,437956..438340,438401..438476,438555..438680,438716..438858,438948..>439039))	Acanthamoeba castellanii str. Neff	14920105
ACA1_265330	mRNA	ACA1_265330	NW_004457532.1	439401	440875	D	ACA1_265330	join(<439401..439491,439637..439842,439917..439975,440063..440206,440336..440447,440537..440752,440861..>440875)	Acanthamoeba castellanii str. Neff	14920106
ACA1_265340	mRNA	ACA1_265340	NW_004457532.1	441477	449179	D	ACA1_265340	join(<441477..441605,441761..441844,442169..442372,442517..442597,442681..442731,442811..442916,442984..443745,443824..444000,444080..444189,444284..444415,444506..445011,445126..445180,445279..445434,445526..445647,445884..446010,446128..446316,446410..446576,446658..446832,446928..447389,447482..447626,447716..447817,447895..448014,448109..448350,448436..>449179)	Acanthamoeba castellanii str. Neff	14920107
ACA1_265360	mRNA	ACA1_265360	NW_004457532.1	451560	452759	R	ACA1_265360	complement(<451560..>452759)	Acanthamoeba castellanii str. Neff	14920109
ACA1_265370	mRNA	ACA1_265370	NW_004457532.1	453245	454018	R	ACA1_265370	complement(join(<453245..453553,453619..453773,453841..>454018))	Acanthamoeba castellanii str. Neff	14920110
ACA1_265380	mRNA	ACA1_265380	NW_004457532.1	454230	456573	R	ACA1_265380	complement(join(<454230..454661,454743..455003,455068..455141,455214..455303,455378..455492,455574..455635,455722..455824,455908..456011,456153..>456573))	Acanthamoeba castellanii str. Neff	14920111
ACA1_265390	mRNA	ACA1_265390	NW_004457532.1	457046	458334	D	ACA1_265390	join(<457046..457134,457206..457362,457472..457592,457673..457854,457930..>458334)	Acanthamoeba castellanii str. Neff	14920112
ACA1_265400	mRNA	ACA1_265400	NW_004457532.1	458616	462651	D	ACA1_265400	join(<458616..458666,458738..458872,458941..459037,459143..459266,459461..459646,459745..459952,460049..460180,460291..460446,460561..460709,460823..460963,461041..461179,461267..461347,461449..461742,461823..461892,461986..462137,462215..462367,462451..>462651)	Acanthamoeba castellanii str. Neff	14920113
ACA1_265410	mRNA	ACA1_265410	NW_004457532.1	462823	463116	R	ACA1_265410	complement(<462823..>463116)	Acanthamoeba castellanii str. Neff	14920114
ACA1_265420	mRNA	ACA1_265420	NW_004457532.1	463732	466088	D	ACA1_265420	join(<463732..464953,465025..465566,465727..465875,465938..>466088)	Acanthamoeba castellanii str. Neff	14920115
ACA1_265430	mRNA	ACA1_265430	NW_004457532.1	466164	468221	D	ACA1_265430	join(<466164..466197,466228..466286,466366..466401,466499..467107,467185..467241,467370..467454,467553..467776,467872..468023,468110..>468221)	Acanthamoeba castellanii str. Neff	14920116
ACA1_265440	mRNA	ACA1_265440	NW_004457532.1	468553	478557	D	ACA1_265440	join(<468553..468675,468920..468967,469081..469401,469571..469661,469769..469867,469955..470051,470137..470270,470393..470667,470768..470874,470971..471079,471173..471314,471383..471652,471755..471930,472073..472144,472225..472357,472432..472500,472578..472646,472750..472892,473046..473200,473280..473375,473450..473663,473758..473848,473934..473968,474014..474813,474919..475024,475144..475258,475344..475584,475684..475846,475934..476091,476244..476540,476633..476795,476885..476978,477070..477266,477393..477715,477810..477993,478121..478327,478498..>478557)	Acanthamoeba castellanii str. Neff	14920117
ACA1_265450	mRNA	ACA1_265450	NW_004457532.1	479224	483628	D	ACA1_265450	join(<479224..479279,479379..479552,479655..479724,479818..480057,480102..480599,480713..480815,480894..481003,481112..481208,481282..481332,481407..481508,481627..481863,481984..482061,482129..482202,482277..482447,482519..482602,482688..482795,482902..483034,483117..483199,483276..483332,483398..>483628)	Acanthamoeba castellanii str. Neff	14920118
ACA1_265460	mRNA	ACA1_265460	NW_004457532.1	483823	486706	R	ACA1_265460	complement(join(<483823..483933,484010..484153,484222..484384,484530..484651,484803..484913,484926..485167,485240..485420,485543..485731,485819..>486706))	Acanthamoeba castellanii str. Neff	14920119
ACA1_265470	mRNA	ACA1_265470	NW_004457532.1	486880	487827	D	ACA1_265470	<486880..>487827	Acanthamoeba castellanii str. Neff	14920120
ACA1_265480	mRNA	ACA1_265480	NW_004457532.1	487977	492659	R	ACA1_265480	complement(join(<487977..488834,488863..490323,490426..490477,490525..490864,490878..492488,492500..>492659))	Acanthamoeba castellanii str. Neff	14920121
ACA1_265490	mRNA	ACA1_265490	NW_004457532.1	493458	494558	D	ACA1_265490	join(<493458..493616,493631..494010,494133..494433,494478..>494558)	Acanthamoeba castellanii str. Neff	14920122
ACA1_265500	mRNA	ACA1_265500	NW_004457532.1	494790	497354	R	ACA1_265500	complement(join(<494790..494988,495071..495229,495292..495421,495558..495735,495827..496064,496152..496810,496923..497020,497144..>497354))	Acanthamoeba castellanii str. Neff	14920123
ACA1_265510	mRNA	ACA1_265510	NW_004457532.1	497753	499212	D	ACA1_265510	join(<497753..497858,497930..498057,498238..498417,498513..498618,498729..498871,498970..>499212)	Acanthamoeba castellanii str. Neff	14920124
ACA1_265520	mRNA	ACA1_265520	NW_004457532.1	499298	500902	R	ACA1_265520	complement(join(<499298..499559,499634..499770,499875..499964,500061..500149,500190..500238,500324..500421,500513..500621,500708..>500902))	Acanthamoeba castellanii str. Neff	14920125
ACA1_265530	mRNA	ACA1_265530	NW_004457532.1	501352	502240	D	ACA1_265530	join(<501352..501381,501449..501504,501572..501628,501705..501837,501926..501988,502070..>502240)	Acanthamoeba castellanii str. Neff	14920126
ACA1_265540	mRNA	ACA1_265540	NW_004457532.1	502377	504899	R	ACA1_265540	complement(join(<502377..502563,502641..502825,502912..503015,503117..503310,503504..503581,503638..503824,503897..503963,504022..504186,504294..504392,504443..504554,504647..504687,504777..>504899))	Acanthamoeba castellanii str. Neff	14920127
ACA1_265550	mRNA	ACA1_265550	NW_004457532.1	505194	506818	R	ACA1_265550	complement(join(<505194..505496,505585..505676,505745..505805,505882..506069,506240..506435,506523..506629,506683..>506818))	Acanthamoeba castellanii str. Neff	14920128
ACA1_265560	mRNA	ACA1_265560	NW_004457532.1	508416	512658	D	ACA1_265560	join(<508416..508810,508916..509034,509123..509388,509465..509544,509611..509678,509750..509790,509814..509999,510095..510245,510316..510522,510627..510718,510807..510918,511001..511181,511274..511366,511458..512058,512125..512234,512358..>512658)	Acanthamoeba castellanii str. Neff	14920129
ACA1_265570	mRNA	ACA1_265570	NW_004457532.1	512984	513964	R	ACA1_265570	complement(join(<512984..513477,513551..513779,513914..>513964))	Acanthamoeba castellanii str. Neff	14920130
ACA1_265580	mRNA	ACA1_265580	NW_004457532.1	515025	516119	R	ACA1_265580	complement(join(<515025..515090,515160..515342,515437..515648,515758..515899,516057..>516119))	Acanthamoeba castellanii str. Neff	14920131
ACA1_265590	mRNA	ACA1_265590	NW_004457532.1	516279	517363	D	ACA1_265590	join(<516279..516344,516429..516617,516737..516839,516966..517122,517228..>517363)	Acanthamoeba castellanii str. Neff	14920132
ACA1_265600	mRNA	ACA1_265600	NW_004457532.1	517634	524904	R	ACA1_265600	complement(join(<517634..517763,517868..517934,518039..518162,518273..518437,518538..518716,518846..519074,519193..519453,519537..519701,519887..520227,520298..520508,520672..521358,521468..521863,521975..522422,522521..522785,522852..523128,523207..523530,523630..523791,523896..523974,524053..524147,524242..524360,524442..524679,524812..>524904))	Acanthamoeba castellanii str. Neff	14920133
ACA1_265610	mRNA	ACA1_265610	NW_004457532.1	525447	525989	R	ACA1_265610	complement(<525447..>525989)	Acanthamoeba castellanii str. Neff	14920134
ACA1_265620	mRNA	ACA1_265620	NW_004457532.1	526006	526560	R	ACA1_265620	complement(join(<526006..526071,526230..526325,526387..>526560))	Acanthamoeba castellanii str. Neff	14920135
ACA1_265830	mRNA	ACA1_265830	NW_004457532.1	529273	530391	R	ACA1_265830	complement(join(<529273..529497,529587..529631,529709..529863,529927..530035,530117..530187,530265..>530391))	Acanthamoeba castellanii str. Neff	14920136
ACA1_265840	mRNA	ACA1_265840	NW_004457532.1	530444	532021	R	ACA1_265840	complement(join(<530444..530598,530682..530786,530862..530933,531011..531113,531208..531344,531416..531555,531625..531693,531732..531763,531824..>532021))	Acanthamoeba castellanii str. Neff	14920137
ACA1_265850	mRNA	ACA1_265850	NW_004457532.1	532314	535402	R	ACA1_265850	complement(join(<532314..532518,532600..532760,532845..533020,533107..533176,533242..533383,533471..533684,533756..533925,533950..533995,534076..534261,534340..534574,534645..534748,534817..534887,534980..535112,535164..535280,535336..>535402))	Acanthamoeba castellanii str. Neff	14920138
ACA1_265860	mRNA	ACA1_265860	NW_004457532.1	535684	536175	R	ACA1_265860	complement(<535684..>536175)	Acanthamoeba castellanii str. Neff	14920139
ACA1_265870	mRNA	ACA1_265870	NW_004457532.1	536513	536845	D	ACA1_265870	<536513..>536845	Acanthamoeba castellanii str. Neff	14920140
ACA1_265880	mRNA	ACA1_265880	NW_004457532.1	537596	538087	R	ACA1_265880	complement(<537596..>538087)	Acanthamoeba castellanii str. Neff	14920141
ACA1_265890	mRNA	ACA1_265890	NW_004457532.1	538338	539431	R	ACA1_265890	complement(join(<538338..538973,539057..>539431))	Acanthamoeba castellanii str. Neff	14920142
ACA1_265900	mRNA	ACA1_265900	NW_004457532.1	539602	543318	D	ACA1_265900	join(<539602..540509,540632..540713,540812..540913,541038..541279,541451..541590,541724..541813,541900..541947,542067..542113,542222..542308,542447..542526,542597..542632,542730..542982,543052..543135,543217..>543318)	Acanthamoeba castellanii str. Neff	14920143
ACA1_265910	mRNA	ACA1_265910	NW_004457532.1	543433	545818	R	ACA1_265910	complement(join(<543433..543669,543771..543953,544054..544279,544371..544452,544528..544674,544780..544885,544970..545155,545343..545422,545479..>545818))	Acanthamoeba castellanii str. Neff	14920144
ACA1_265920	mRNA	ACA1_265920	NW_004457532.1	547442	547838	R	ACA1_265920	complement(join(<547442..547596,547697..>547838))	Acanthamoeba castellanii str. Neff	14920145
ACA1_265930	mRNA	ACA1_265930	NW_004457532.1	548135	550799	R	ACA1_265930	complement(join(<548135..548391,548480..548547,548630..548828,548943..548979,549062..549526,549637..549756,549850..550104,550204..550356,550472..550556,550640..550694,550757..>550799))	Acanthamoeba castellanii str. Neff	14920146
ACA1_265940	mRNA	ACA1_265940	NW_004457532.1	551217	551662	D	ACA1_265940	join(<551217..551316,551388..551456,551544..>551662)	Acanthamoeba castellanii str. Neff	14920147
ACA1_265950	mRNA	ACA1_265950	NW_004457532.1	552004	553431	R	ACA1_265950	complement(join(<552004..552268,552368..552587,552660..552876,552967..553108,553200..553311,553401..>553431))	Acanthamoeba castellanii str. Neff	14920148
ACA1_265960	mRNA	ACA1_265960	NW_004457532.1	554059	554948	R	ACA1_265960	complement(join(<554059..554280,554392..554640,554745..554873,554943..>554948))	Acanthamoeba castellanii str. Neff	14920149
ACA1_265970	mRNA	ACA1_265970	NW_004457532.1	555713	561179	D	ACA1_265970	join(<555713..556880,556970..557040,557142..557215,557307..557412,557497..557555,557640..557747,557864..557956,558043..558162,558253..559853,559928..560679,560760..>561179)	Acanthamoeba castellanii str. Neff	14920150
ACA1_265980	mRNA	ACA1_265980	NW_004457532.1	561357	562835	D	ACA1_265980	join(<561357..561474,561622..561739,561912..562139,562310..>562835)	Acanthamoeba castellanii str. Neff	14920151
ACA1_265990	mRNA	ACA1_265990	NW_004457532.1	562956	563487	D	ACA1_265990	join(<562956..563103,563194..563300,563371..>563487)	Acanthamoeba castellanii str. Neff	14920152
ACA1_266000	mRNA	ACA1_266000	NW_004457532.1	563581	566880	R	ACA1_266000	complement(join(<563581..563678,563763..563831,563944..564010,564083..564153,564245..564384,564491..564593,564695..564755,564827..564970,565091..565177,565257..565354,565437..565477,565558..565596,565684..565781,565897..565977,566071..566124,566221..>566880))	Acanthamoeba castellanii str. Neff	14920153
ACA1_266010	mRNA	ACA1_266010	NW_004457532.1	567696	570959	D	ACA1_266010	join(<567696..567768,567874..568318,568409..569072,569190..569389,569473..569631,569729..570083,570210..570676,570761..>570959)	Acanthamoeba castellanii str. Neff	14920154
ACA1_266020	mRNA	ACA1_266020	NW_004457532.1	571060	574183	R	ACA1_266020	complement(join(<571060..571238,571339..571508,571576..571795,571883..572086,572169..572271,572354..572479,572628..572754,572833..572994,573128..573222,573339..573458,573538..573618,573711..573892,574066..>574183))	Acanthamoeba castellanii str. Neff	14920155
ACA1_266030	mRNA	ACA1_266030	NW_004457532.1	574570	575519	R	ACA1_266030	complement(join(<574570..574590,574674..575345,575372..575455,575475..>575519))	Acanthamoeba castellanii str. Neff	14920156
ACA1_266040	mRNA	ACA1_266040	NW_004457532.1	578979	579321	D	ACA1_266040	join(<578979..579026,579097..>579321)	Acanthamoeba castellanii str. Neff	14920157
ACA1_266050	mRNA	ACA1_266050	NW_004457532.1	580779	581483	R	ACA1_266050	complement(join(<580779..580912,580972..581101,581210..581242,581439..>581483))	Acanthamoeba castellanii str. Neff	14920158
ACA1_266070	mRNA	ACA1_266070	NW_004457532.1	585168	586946	R	ACA1_266070	complement(<585168..>586946)	Acanthamoeba castellanii str. Neff	14920160
ACA1_266080	mRNA	ACA1_266080	NW_004457532.1	588949	590294	R	ACA1_266080	complement(join(<588949..589201,589367..589844,589916..>590294))	Acanthamoeba castellanii str. Neff	14920161
ACA1_266090	mRNA	ACA1_266090	NW_004457532.1	591023	594149	D	ACA1_266090	join(<591023..591062,591345..592220,592312..593573,593643..593722,593822..593961,594109..>594149)	Acanthamoeba castellanii str. Neff	14920162
ACA1_266100	mRNA	ACA1_266100	NW_004457532.1	594190	597014	D	ACA1_266100	join(<594190..594243,594357..594445,594487..594563,594659..594724,594838..594968,595064..595136,595231..595313,595377..595487,595628..596039,596116..596407,596519..596682,596794..>597014)	Acanthamoeba castellanii str. Neff	14920163
ACA1_266110	mRNA	ACA1_266110	NW_004457532.1	597458	605926	D	ACA1_266110	join(<597458..597484,597648..597838,597967..598014,598121..598189,598313..598391,598479..598590,598706..598857,598982..599098,599167..599282,599358..599404,599463..599544,599614..599727,599800..599882,599961..600059,600147..600284,600358..600494,600561..600719,600796..600952,601020..601183,601298..601405,601499..601576,601672..602169,602250..602392,602479..602609,602702..602836,602942..603026,603104..603305,603404..603538,603615..603685,603798..603926,603998..604097,604205..604268,604368..604485,604603..604768,604872..604980,605137..605264,605356..605502,605579..605713,605786..>605926)	Acanthamoeba castellanii str. Neff	14920164
ACA1_266120	mRNA	ACA1_266120	NW_004457532.1	606007	607977	D	ACA1_266120	join(<606007..606223,606429..606515,606590..606976,607086..607294,607407..607493,607675..>607977)	Acanthamoeba castellanii str. Neff	14920165
ACA1_266130	mRNA	ACA1_266130	NW_004457532.1	608333	611785	R	ACA1_266130	complement(join(<608333..608427,608693..608855,608921..609277,609504..609618,609731..609851,609933..610153,610276..610382,610467..610604,610718..610908,611002..611106,611230..>611785))	Acanthamoeba castellanii str. Neff	14920166
ACA1_266140	mRNA	ACA1_266140	NW_004457532.1	612137	613722	R	ACA1_266140	complement(join(<612137..612202,612276..612357,612423..612539,612610..612721,612820..612883,612961..613157,613281..>613722))	Acanthamoeba castellanii str. Neff	14920167
ACA1_266150	mRNA	ACA1_266150	NW_004457532.1	613842	618202	R	ACA1_266150	complement(join(<613842..614141,614233..614419,614567..614754,614857..615065,615149..615278,615383..615532,615596..615806,615908..615999,616071..616259,616347..616567,616629..616701,616794..616953,617022..617161,617240..617474,617567..617636,617727..617834,617920..>618202))	Acanthamoeba castellanii str. Neff	14920168
ACA1_266160	mRNA	ACA1_266160	NW_004457532.1	618733	619788	D	ACA1_266160	join(<618733..618928,619030..619170,619241..619410,619496..619615,619702..>619788)	Acanthamoeba castellanii str. Neff	14920169
ACA1_266170	mRNA	ACA1_266170	NW_004457532.1	619961	622826	R	ACA1_266170	complement(join(<619961..620269,620373..620479,620542..620657,620729..620797,620882..621086,621229..621362,621443..621537,621649..621723,621847..622015,622172..622285,622387..>622826))	Acanthamoeba castellanii str. Neff	14920170
ACA1_266180	mRNA	ACA1_266180	NW_004457532.1	623228	625474	D	ACA1_266180	join(<623228..623476,623608..623788,623879..624076,624158..624334,624424..624588,624691..624850,624947..625049,625110..625212,625290..>625474)	Acanthamoeba castellanii str. Neff	14920171
ACA1_266190	mRNA	ACA1_266190	NW_004457532.1	625661	628046	R	ACA1_266190	complement(join(<625661..626177,626306..626453,626549..626615,626708..626814,626888..627118,627182..627240,627303..627412,627528..627633,627727..627892,628007..>628046))	Acanthamoeba castellanii str. Neff	14920172
ACA1_266200	mRNA	ACA1_266200	NW_004457532.1	628499	630629	D	ACA1_266200	join(<628499..628720,628847..629414,629601..629771,629846..629982,630081..630161,630284..630404,630490..>630629)	Acanthamoeba castellanii str. Neff	14920173
ACA1_266210	mRNA	ACA1_266210	NW_004457532.1	630731	632158	R	ACA1_266210	complement(join(<630731..630932,631008..631215,631288..631625,631712..631833,631949..>632158))	Acanthamoeba castellanii str. Neff	14920174
ACA1_266220	mRNA	ACA1_266220	NW_004457532.1	632610	633632	D	ACA1_266220	join(<632610..633065,633159..633308,633417..>633632)	Acanthamoeba castellanii str. Neff	14920175
ACA1_266230	mRNA	ACA1_266230	NW_004457532.1	634149	639280	D	ACA1_266230	join(<634149..634727,634928..635053,635150..635374,635467..636975,637062..637129,637291..637429,637520..637607,637703..638288,638371..638678,638769..638959,639035..>639280)	Acanthamoeba castellanii str. Neff	14920176
ACA1_266240	mRNA	ACA1_266240	NW_004457532.1	639679	642822	D	ACA1_266240	join(<639679..639801,639868..640222,640372..640476,640589..640779,640870..641007,641110..641219,641319..641515,641589..641706,641796..641916,642026..642325,642397..642571,642695..>642822)	Acanthamoeba castellanii str. Neff	14920177
ACA1_266250	mRNA	ACA1_266250	NW_004457532.1	643021	643934	R	ACA1_266250	complement(join(<643021..643180,643286..643469,643586..>643934))	Acanthamoeba castellanii str. Neff	14920178
ACA1_266260	mRNA	ACA1_266260	NW_004457532.1	644555	647469	D	ACA1_266260	join(<644555..645023,645134..645222,645391..645522,645617..645769,645861..645961,646054..646280,646351..646459,646551..646665,646813..647118,647191..>647469)	Acanthamoeba castellanii str. Neff	14920179
ACA1_266270	mRNA	ACA1_266270	NW_004457532.1	647905	649540	R	ACA1_266270	complement(join(<647905..648064,648182..648365,648512..648642,648749..648864,648967..649173,649275..649343,649436..>649540))	Acanthamoeba castellanii str. Neff	14920180
ACA1_266280	mRNA	ACA1_266280	NW_004457532.1	649740	652973	D	ACA1_266280	join(<649740..651086,651166..651301,651381..651619,651708..651784,651876..651981,652081..652281,652295..652397,652494..652691,652768..>652973)	Acanthamoeba castellanii str. Neff	14920181
ACA1_266290	mRNA	ACA1_266290	NW_004457532.1	653320	654015	D	ACA1_266290	<653320..>654015	Acanthamoeba castellanii str. Neff	14920182
ACA1_266300	mRNA	ACA1_266300	NW_004457532.1	654144	657500	D	ACA1_266300	<654144..>657500	Acanthamoeba castellanii str. Neff	14920183
ACA1_266310	mRNA	ACA1_266310	NW_004457532.1	657568	658428	D	ACA1_266310	<657568..>658428	Acanthamoeba castellanii str. Neff	14920184
ACA1_266320	mRNA	ACA1_266320	NW_004457532.1	658941	662416	D	ACA1_266320	join(<658941..659060,659177..659332,659401..659485,659550..659655,659751..660666,660768..660851,660962..661198,661282..661413,661540..661604,661672..661777,661877..>662416)	Acanthamoeba castellanii str. Neff	14920185
ACA1_266330	mRNA	ACA1_266330	NW_004457532.1	662633	665455	R	ACA1_266330	complement(join(<662633..662848,662949..663340,663488..663626,663736..663809,663948..664701,664783..665188,665307..>665455))	Acanthamoeba castellanii str. Neff	14920186
ACA1_266340	mRNA	ACA1_266340	NW_004457532.1	665588	668524	D	ACA1_266340	join(<665588..665753,665869..666072,666115..666230,666320..666488,666629..666811,666945..667148,667245..667361,667444..667562,667742..667782,667929..668035,668135..668263,668373..>668524)	Acanthamoeba castellanii str. Neff	14920187
ACA1_266350	mRNA	ACA1_266350	NW_004457532.1	668564	668976	R	ACA1_266350	complement(join(<668564..668793,668853..>668976))	Acanthamoeba castellanii str. Neff	14920188
ACA1_266360	mRNA	ACA1_266360	NW_004457532.1	669222	671186	D	ACA1_266360	join(<669222..669473,669537..669650,669739..669898,669975..670138,670217..670450,670522..670682,670760..>671186)	Acanthamoeba castellanii str. Neff	14920189
ACA1_266370	mRNA	ACA1_266370	NW_004457532.1	671379	672558	D	ACA1_266370	join(<671379..671565,671665..671838,671954..672049,672164..>672558)	Acanthamoeba castellanii str. Neff	14920190
ACA1_266380	mRNA	ACA1_266380	NW_004457532.1	672666	676204	R	ACA1_266380	complement(join(<672666..672854,672965..673054,673140..673220,673301..673380,673518..673605,673713..673754,673852..673905,674012..674092,674243..674341,674482..674553,674669..674757,674837..674965,675056..675127,675298..675489,675522..675632,675753..675861,675965..676088,676128..>676204))	Acanthamoeba castellanii str. Neff	14920191
ACA1_266390	mRNA	ACA1_266390	NW_004457532.1	676482	679665	D	ACA1_266390	join(<676482..676920,677096..677769,677892..678041,678130..678198,678307..678666,678856..678865,678926..679151,679239..679365,679477..>679665)	Acanthamoeba castellanii str. Neff	14920192
ACA1_266500	mRNA	ACA1_266500	NW_004457532.1	680154	682008	D	ACA1_266500	join(<680154..680501,680599..680708,680861..680996,681305..681481,681622..681705,681883..>682008)	Acanthamoeba castellanii str. Neff	14920193
ACA1_266510	mRNA	ACA1_266510	NW_004457532.1	682129	685595	R	ACA1_266510	complement(join(<682129..682302,682461..682474,682637..682888,683006..683108,683317..683433,683540..683645,683763..683833,683973..684211,684321..684373,684449..684537,684680..684749,684869..684966,684981..>685595))	Acanthamoeba castellanii str. Neff	14920194
ACA1_266520	mRNA	ACA1_266520	NW_004457532.1	685809	686219	D	ACA1_266520	<685809..>686219	Acanthamoeba castellanii str. Neff	14920195
ACA1_266530	mRNA	ACA1_266530	NW_004457532.1	686434	689788	R	ACA1_266530	complement(join(<686434..686535,686614..686740,686821..686990,687066..687161,687276..687407,687496..688265,688363..688416,688517..688648,688749..688843,688912..688983,689087..689218,689314..689425,689500..>689788))	Acanthamoeba castellanii str. Neff	14920196
ACA1_266750	mRNA	ACA1_266750	NW_004457532.1	702891	705007	R	ACA1_266750	complement(join(<702891..703126,703197..703371,703486..703581,703671..703874,703952..704077,704157..704273,704372..704441,704526..704625,704699..704771,704894..>705007))	Acanthamoeba castellanii str. Neff	14920198
ACA1_266760	mRNA	ACA1_266760	NW_004457532.1	705247	707468	D	ACA1_266760	join(<705247..705299,705390..705465,705530..705685,705815..705904,705979..706074,706146..706249,706623..706719,706872..706940,706986..707055,707161..>707468)	Acanthamoeba castellanii str. Neff	14920199
ACA1_266770	mRNA	ACA1_266770	NW_004457532.1	708091	709131	D	ACA1_266770	join(<708091..708237,708361..708640,708721..708924,709052..>709131)	Acanthamoeba castellanii str. Neff	14920200
ACA1_266780	mRNA	ACA1_266780	NW_004457532.1	709330	712642	R	ACA1_266780	complement(join(<709330..709548,709650..709875,710007..710434,710681..710904,711124..711294,711416..711745,711847..711979,712040..>712642))	Acanthamoeba castellanii str. Neff	14920201
ACA1_266790	mRNA	ACA1_266790	NW_004457532.1	713947	714726	R	ACA1_266790	complement(<713947..>714726)	Acanthamoeba castellanii str. Neff	14920202
ACA1_266800	mRNA	ACA1_266800	NW_004457532.1	715194	718880	D	ACA1_266800	join(<715194..715660,715856..715934,716056..716152,716230..716391,716481..716658,716778..716880,716966..717748,717826..718179,718269..>718880)	Acanthamoeba castellanii str. Neff	14920203
ACA1_266810	mRNA	ACA1_266810	NW_004457532.1	719135	722185	R	ACA1_266810	complement(join(<719135..719404,719537..719647,719738..719842,719995..720120,720284..720368,720430..720627,720752..720838,720980..721173,721279..721414,721515..721616,721743..721938,722068..>722185))	Acanthamoeba castellanii str. Neff	14920204
ACA1_266820	mRNA	ACA1_266820	NW_004457532.1	722374	723916	D	ACA1_266820	join(<722374..722776,722904..722943,723031..723145,723267..723423,723520..723659,723779..>723916)	Acanthamoeba castellanii str. Neff	14920205
ACA1_266830	mRNA	ACA1_266830	NW_004457532.1	724343	727896	R	ACA1_266830	complement(join(<724343..724508,724548..724601,724742..724809,724976..725067,725154..725221,725338..725412,725515..725635,725764..725993,726130..726198,726324..726445,726547..726672,726789..726943,727083..727387,727462..727515,727618..727707,727826..>727896))	Acanthamoeba castellanii str. Neff	14920206
ACA1_266840	mRNA	ACA1_266840	NW_004457532.1	727985	729932	D	ACA1_266840	join(<727985..728096,728464..728552,728650..728698,728836..728906,729241..729321,729408..729497,729626..729679,729837..>729932)	Acanthamoeba castellanii str. Neff	14920207
ACA1_266850	mRNA	ACA1_266850	NW_004457532.1	730263	731699	R	ACA1_266850	complement(join(<730263..730453,730533..730686,730809..730938,731208..731568,731648..>731699))	Acanthamoeba castellanii str. Neff	14920208
ACA1_266860	mRNA	ACA1_266860	NW_004457532.1	734490	735519	R	ACA1_266860	complement(join(<734490..734934,735047..735124,735169..735216,735227..735317,735372..>735519))	Acanthamoeba castellanii str. Neff	14920209
ACA1_266870	mRNA	ACA1_266870	NW_004457532.1	735788	740064	R	ACA1_266870	complement(join(<735788..738127,738212..738313,738422..738518,738572..738752,738838..738966,739048..739194,739244..739692,739763..739837,740021..>740064))	Acanthamoeba castellanii str. Neff	14920210
ACA1_266880	mRNA	ACA1_266880	NW_004457532.1	740673	745747	D	ACA1_266880	join(<740673..740952,741037..741191,741261..741351,741430..741578,741818..741935,741992..742108,742181..742253,742343..742507,742589..742663,742752..742849,742923..742982,743008..743093,743177..743280,743361..743532,743594..>745747)	Acanthamoeba castellanii str. Neff	14920211
ACA1_266890	mRNA	ACA1_266890	NW_004457532.1	745837	746769	R	ACA1_266890	complement(join(<745837..746493,746662..>746769))	Acanthamoeba castellanii str. Neff	14920212
ACA1_266900	mRNA	ACA1_266900	NW_004457532.1	747204	749360	D	ACA1_266900	join(<747204..748092,748215..748309,748415..748540,748669..748779,748882..749028,749169..>749360)	Acanthamoeba castellanii str. Neff	14920213
ACA1_266910	mRNA	ACA1_266910	NW_004457532.1	749601	750860	R	ACA1_266910	complement(join(<749601..749980,750082..750395,750481..750567,750661..>750860))	Acanthamoeba castellanii str. Neff	14920214
ACA1_266920	mRNA	ACA1_266920	NW_004457532.1	751889	752377	D	ACA1_266920	join(<751889..752091,752128..>752377)	Acanthamoeba castellanii str. Neff	14920215
ACA1_266930	mRNA	ACA1_266930	NW_004457532.1	752603	753800	D	ACA1_266930	join(<752603..753289,753396..753530,753651..>753800)	Acanthamoeba castellanii str. Neff	14920216
ACA1_266940	mRNA	ACA1_266940	NW_004457532.1	755809	756847	R	ACA1_266940	complement(join(<755809..755929,756031..756127,756206..756384,756515..756588,756658..756759,756833..>756847))	Acanthamoeba castellanii str. Neff	14920217
ACA1_266950	mRNA	ACA1_266950	NW_004457532.1	757267	758806	D	ACA1_266950	join(<757267..757607,757702..757902,757977..758391,758459..>758806)	Acanthamoeba castellanii str. Neff	14920218
ACA1_266960	mRNA	ACA1_266960	NW_004457532.1	758926	763166	R	ACA1_266960	complement(join(<758926..759195,759331..759928,760107..760231,760344..760482,760549..760723,760867..760966,761069..761180,761243..761418,761547..761722,761804..762064,762176..762332,762463..762609,762697..762834,762957..>763166))	Acanthamoeba castellanii str. Neff	14920219
ACA1_266970	mRNA	ACA1_266970	NW_004457532.1	763378	766043	D	ACA1_266970	join(<763378..763416,763480..763824,763916..764159,764282..764321,764411..764502,764584..764726,764822..765039,765218..765335,765431..765586,765733..765832,765931..>766043)	Acanthamoeba castellanii str. Neff	14920220
ACA1_266980	mRNA	ACA1_266980	NW_004457532.1	766123	768175	R	ACA1_266980	complement(join(<766123..766314,766378..766539,766644..766736,766885..766989,767086..767243,767330..767495,767577..767770,767878..>768175))	Acanthamoeba castellanii str. Neff	14920221
ACA1_266990	mRNA	ACA1_266990	NW_004457532.1	768780	771758	D	ACA1_266990	join(<768780..769078,769160..769254,769371..769501,769597..769747,769835..769940,770039..770119,770249..770351,770491..770639,770720..770835,770963..771077,771158..771249,771370..771448,771557..>771758)	Acanthamoeba castellanii str. Neff	14920222
ACA1_267000	mRNA	ACA1_267000	NW_004457532.1	772509	775181	D	ACA1_267000	join(<772509..772955,773032..773280,773469..773629,773789..773895,773985..774417,774533..774652,774745..775010,775096..>775181)	Acanthamoeba castellanii str. Neff	14920223
ACA1_267010	mRNA	ACA1_267010	NW_004457532.1	775550	776128	R	ACA1_267010	complement(<775550..>776128)	Acanthamoeba castellanii str. Neff	14920224
ACA1_267020	mRNA	ACA1_267020	NW_004457532.1	776396	777140	D	ACA1_267020	join(<776396..776445,776629..776733,776773..776810,776911..>777140)	Acanthamoeba castellanii str. Neff	14920225
ACA1_267030	mRNA	ACA1_267030	NW_004457532.1	777385	779246	D	ACA1_267030	join(<777385..777490,777556..777910,777992..778342,778357..778451,778578..778723,778815..778959,779035..>779246)	Acanthamoeba castellanii str. Neff	14920226
ACA1_267040	mRNA	ACA1_267040	NW_004457532.1	779536	782293	R	ACA1_267040	complement(join(<779536..779938,780059..780141,780246..780407,780530..781174,781266..781408,781495..781953,782263..>782293))	Acanthamoeba castellanii str. Neff	14920227
ACA1_267050	mRNA	ACA1_267050	NW_004457532.1	782471	782976	R	ACA1_267050	complement(join(<782471..782691,782919..>782976))	Acanthamoeba castellanii str. Neff	14920228
ACA1_267070	mRNA	ACA1_267070	NW_004457532.1	785697	786084	R	ACA1_267070	complement(join(<785697..785761,785867..785918,785956..>786084))	Acanthamoeba castellanii str. Neff	14920230
ACA1_267080	mRNA	ACA1_267080	NW_004457532.1	786754	794181	D	ACA1_267080	join(<786754..786831,787001..787075,787221..787358,787446..787754,787821..787905,787978..788263,788329..788522,788600..788736,788788..789057,789152..789410,789512..789659,789730..790249,790336..790452,790539..790903,791011..791161,791306..791709,791798..791965,792052..792308,792558..792832,792937..793105,793251..793559,793871..>794181)	Acanthamoeba castellanii str. Neff	14920231
ACA1_267090	mRNA	ACA1_267090	NW_004457532.1	794249	798034	D	ACA1_267090	join(<794249..794342,794416..794556,794677..794754,794867..794986,795097..795203,795275..795440,795521..795702,795776..795885,795957..796573,796694..796783,796969..797012,797131..797292,797395..797595,797699..797788,797927..>798034)	Acanthamoeba castellanii str. Neff	14920232
ACA1_267100	mRNA	ACA1_267100	NW_004457532.1	798094	800962	R	ACA1_267100	complement(join(<798094..798272,798339..798600,798666..799130,799217..799343,799431..799509,799644..799826,799943..800072,800184..800266,800392..800482,800567..800711,800841..>800962))	Acanthamoeba castellanii str. Neff	14920233
ACA1_267110	mRNA	ACA1_267110	NW_004457532.1	801384	802684	D	ACA1_267110	join(<801384..801595,801682..801768,801851..802007,802090..802246,802314..>802684)	Acanthamoeba castellanii str. Neff	14920234
ACA1_267130	mRNA	ACA1_267130	NW_004457532.1	803746	806174	R	ACA1_267130	complement(join(<803746..803902,804024..804571,804588..804753,804843..804964,805052..805101,805207..805390,805645..805780,805978..>806174))	Acanthamoeba castellanii str. Neff	14920236
ACA1_267140	mRNA	ACA1_267140	NW_004457532.1	806999	808811	R	ACA1_267140	complement(join(<806999..807034,807126..807317,807453..807990,808097..808257,808410..808509,808651..>808811))	Acanthamoeba castellanii str. Neff	14920237
ACA1_267150	mRNA	ACA1_267150	NW_004457532.1	808968	810837	R	ACA1_267150	complement(join(<808968..809142,809229..809342,809415..809526,809617..809704,809828..810000,810210..810331,810465..810602,810788..>810837))	Acanthamoeba castellanii str. Neff	14920238
ACA1_267160	mRNA	ACA1_267160	NW_004457532.1	811295	812337	R	ACA1_267160	complement(join(<811295..811474,811538..811613,811692..811804,811872..811923,812027..812139,812215..>812337))	Acanthamoeba castellanii str. Neff	14920239
ACA1_267170	mRNA	ACA1_267170	NW_004457532.1	812512	813944	D	ACA1_267170	join(<812512..812580,812680..812778,812850..812943,813087..813218,813265..813387,813485..813552,813653..813758,813838..>813944)	Acanthamoeba castellanii str. Neff	14920240
ACA1_267180	mRNA	ACA1_267180	NW_004457532.1	814307	824172	D	ACA1_267180	join(<814307..814536,814873..814962,815064..815440,815564..815732,815842..816206,816297..816424,816507..816631,816730..816902,816985..817148,817300..817584,817614..817820,817920..818130,818215..818429,818572..818865,818935..819082,819165..819505,819603..819883,819973..820198,820275..820423,820512..820737,820854..821069,821159..821317,821396..821516,821635..822027,822097..822173,822269..822849,822950..823271,823359..823562,823675..823795,823884..823986,824076..>824172)	Acanthamoeba castellanii str. Neff	14920241
ACA1_267190	mRNA	ACA1_267190	NW_004457532.1	824342	826446	R	ACA1_267190	complement(join(<824342..824486,824582..824714,824804..824906,824958..825077,825167..825269,825374..825624,825711..825802,825844..826006,826096..826162,826238..>826446))	Acanthamoeba castellanii str. Neff	14920242
ACA1_267200	mRNA	ACA1_267200	NW_004457532.1	827187	830151	D	ACA1_267200	join(<827187..827352,827463..827812,827920..828122,828221..828308,828389..828445,828546..828639,828680..828766,828873..829182,829318..829400,829522..829758,829841..829931,830076..>830151)	Acanthamoeba castellanii str. Neff	14920243
ACA1_267210	mRNA	ACA1_267210	NW_004457532.1	830240	831530	R	ACA1_267210	complement(join(<830240..830355,830429..830496,830573..830789,830991..831062,831153..831249,831332..831377,831469..>831530))	Acanthamoeba castellanii str. Neff	14920244
ACA1_267220	mRNA	ACA1_267220	NW_004457532.1	831756	832119	D	ACA1_267220	join(<831756..831903,832031..>832119)	Acanthamoeba castellanii str. Neff	14920245
ACA1_267230	mRNA	ACA1_267230	NW_004457532.1	832323	835104	R	ACA1_267230	complement(join(<832323..832553,832700..832878,832990..833345,833449..833528,833617..833823,833938..834197,834282..834365,834503..834532,834600..834848,835017..>835104))	Acanthamoeba castellanii str. Neff	14920246
ACA1_267240	mRNA	ACA1_267240	NW_004457532.1	835485	836529	R	ACA1_267240	complement(join(<835485..835609,835731..835859,836044..836096,836202..836316,836451..>836529))	Acanthamoeba castellanii str. Neff	14920247
ACA1_267250	mRNA	ACA1_267250	NW_004457532.1	837035	838402	D	ACA1_267250	join(<837035..837110,837190..837327,837407..837475,837568..837628,837713..837744,837853..838048,838153..>838402)	Acanthamoeba castellanii str. Neff	14920248
ACA1_267260	mRNA	ACA1_267260	NW_004457532.1	838629	840329	D	ACA1_267260	join(<838629..838649,838718..838915,839021..839120,839188..839291,839392..839560,839613..839752,839831..839972,840298..>840329)	Acanthamoeba castellanii str. Neff	14920249
ACA1_267270	mRNA	ACA1_267270	NW_004457532.1	841487	842071	R	ACA1_267270	complement(join(<841487..841789,841902..842003,842042..>842071))	Acanthamoeba castellanii str. Neff	14920250
ACA1_267280	mRNA	ACA1_267280	NW_004457532.1	842465	845717	D	ACA1_267280	join(<842465..842495,842636..842835,842927..843045,843167..843332,843422..843642,843731..844325,844419..>845717)	Acanthamoeba castellanii str. Neff	14920251
ACA1_267290	mRNA	ACA1_267290	NW_004457532.1	845942	848246	D	ACA1_267290	join(<845942..846551,846694..846789,846904..847104,847198..847407,847519..847625,847708..847779,847895..848029,848109..>848246)	Acanthamoeba castellanii str. Neff	14920252
ACA1_267300	mRNA	ACA1_267300	NW_004457532.1	848397	851943	R	ACA1_267300	complement(join(<848397..848654,848756..848869,848972..849096,849190..849247,849381..849443,849674..849886,849985..850180,850266..850547,850650..850873,850981..851171,851290..851401,851470..851670,851707..>851943))	Acanthamoeba castellanii str. Neff	14920253
ACA1_267310	mRNA	ACA1_267310	NW_004457532.1	852439	854803	R	ACA1_267310	complement(join(<852439..852612,852707..852778,852918..853058,853116..853211,853340..853827,853957..854060,854148..854160,854313..854452,854625..>854803))	Acanthamoeba castellanii str. Neff	14920254
ACA1_267320	mRNA	ACA1_267320	NW_004457532.1	854900	855936	R	ACA1_267320	complement(join(<854900..855046,855135..855337,855412..855539,855812..>855936))	Acanthamoeba castellanii str. Neff	14920255
ACA1_267330	mRNA	ACA1_267330	NW_004457532.1	856242	859036	D	ACA1_267330	join(<856242..856541,856766..856895,857027..857160,857362..857456,857561..857626,857714..857787,857899..858059,858143..858263,858410..858531,858604..858667,858723..858808,858905..>859036)	Acanthamoeba castellanii str. Neff	14920256
ACA1_267340	mRNA	ACA1_267340	NW_004457532.1	859182	860657	R	ACA1_267340	complement(join(<859182..859259,859365..859511,859581..859690,859750..859813,859893..859947,860035..860179,860254..860409,860534..>860657))	Acanthamoeba castellanii str. Neff	14920257
ACA1_267460	mRNA	ACA1_267460	NW_004457532.1	865034	865345	R	ACA1_267460	complement(<865034..>865345)	Acanthamoeba castellanii str. Neff	14920259
ACA1_267570	mRNA	ACA1_267570	NW_004457532.1	866453	866839	D	ACA1_267570	join(<866453..866566,866664..866739,866754..>866839)	Acanthamoeba castellanii str. Neff	14920260
ACA1_267680	mRNA	ACA1_267680	NW_004457532.1	867836	869562	R	ACA1_267680	complement(join(<867836..867951,867969..>869562))	Acanthamoeba castellanii str. Neff	14920261
ACA1_267690	mRNA	ACA1_267690	NW_004457532.1	869867	870202	R	ACA1_267690	complement(join(<869867..869899,870023..>870202))	Acanthamoeba castellanii str. Neff	14920262
ACA1_267700	mRNA	ACA1_267700	NW_004457532.1	870614	871798	D	ACA1_267700	join(<870614..871089,871378..871607,871689..>871798)	Acanthamoeba castellanii str. Neff	14920263
ACA1_267810	mRNA	ACA1_267810	NW_004457532.1	872456	873160	D	ACA1_267810	join(<872456..872973,873052..>873160)	Acanthamoeba castellanii str. Neff	14920264
ACA1_267820	mRNA	ACA1_267820	NW_004457532.1	873706	877200	D	ACA1_267820	join(<873706..873716,873758..873847,873996..874669,874783..874937,875018..875143,875294..875433,875549..875656,875731..875960,876030..876070,876090..876145,876278..876342,876449..876540,876629..876756,876843..>877200)	Acanthamoeba castellanii str. Neff	14920265
ACA1_267830	mRNA	ACA1_267830	NW_004457532.1	877355	877657	D	ACA1_267830	join(<877355..877477,877541..>877657)	Acanthamoeba castellanii str. Neff	14920266
ACA1_267840	mRNA	ACA1_267840	NW_004457532.1	877738	879740	R	ACA1_267840	complement(join(<877738..877828,877960..878039,878157..878253,878376..878483,878624..878669,878829..878904,879015..879214,879327..879538,879697..>879740))	Acanthamoeba castellanii str. Neff	14920267
ACA1_267860	mRNA	ACA1_267860	NW_004457532.1	885438	887933	R	ACA1_267860	complement(join(<885438..885588,885673..885901,885996..886081,886163..886256,886421..887126,887280..887377,887452..887556,887630..>887933))	Acanthamoeba castellanii str. Neff	14920269
ACA1_267870	mRNA	ACA1_267870	NW_004457532.1	888653	890889	D	ACA1_267870	join(<888653..888682,888798..888952,889032..889104,889220..889408,889512..889946,890032..890168,890264..890466,890560..890692,890775..>890889)	Acanthamoeba castellanii str. Neff	14920270
ACA1_267880	mRNA	ACA1_267880	NW_004457532.1	891042	891766	R	ACA1_267880	complement(join(<891042..891254,891348..891619,891721..>891766))	Acanthamoeba castellanii str. Neff	14920271
ACA1_267890	mRNA	ACA1_267890	NW_004457532.1	891997	892986	R	ACA1_267890	complement(join(<891997..892097,892164..892335,892481..892753,892852..>892986))	Acanthamoeba castellanii str. Neff	14920272
ACA1_267900	mRNA	ACA1_267900	NW_004457532.1	893268	896964	D	ACA1_267900	join(<893268..893417,893505..893574,893685..893816,893967..894085,894205..894313,894451..894735,894824..894942,895119..895243,895356..895521,896083..896220,896344..896482,896648..896751,896869..>896964)	Acanthamoeba castellanii str. Neff	14920273
ACA1_268110	mRNA	ACA1_268110	NW_004457532.1	898222	899173	D	ACA1_268110	join(<898222..898237,898494..898606,898749..898901,899125..899155,899166..>899173)	Acanthamoeba castellanii str. Neff	14920274
ACA1_268420	mRNA	ACA1_268420	NW_004457532.1	901068	904873	D	ACA1_268420	join(<901068..901190,901419..901510,901688..901784,901925..901995,902140..902233,902334..902485,902644..902764,902882..902964,903126..903280,903395..903468,903674..903832,903886..904004,904112..904211,904341..904413,904558..904673,904769..>904873)	Acanthamoeba castellanii str. Neff	14920275
ACA1_268430	mRNA	ACA1_268430	NW_004457532.1	905183	907433	R	ACA1_268430	complement(join(<905183..905691,905839..905997,906115..906362,906475..906609,906709..906826,907038..907121,907220..>907433))	Acanthamoeba castellanii str. Neff	14920276
ACA1_268540	mRNA	ACA1_268540	NW_004457532.1	908190	911207	D	ACA1_268540	join(<908190..908225,908335..908443,908587..908633,908700..908858,908950..909078,909178..909294,909407..909521,909627..909739,909984..910079,910206..>911207)	Acanthamoeba castellanii str. Neff	14920277
ACA1_268750	mRNA	ACA1_268750	NW_004457532.1	911750	912567	D	ACA1_268750	join(<911750..911892,912049..912240,912429..>912567)	Acanthamoeba castellanii str. Neff	14920278
ACA1_268760	mRNA	ACA1_268760	NW_004457532.1	913045	917958	R	ACA1_268760	complement(join(<913045..913155,913258..913387,913506..913551,913659..913682,913790..913901,913982..914008,914045..914167,914341..914592,914720..914879,915011..915198,915244..915416,915559..915655,915766..915794,916019..916101,916297..916360,916559..916621,916748..916788,916910..916922,917063..917114,917308..917444,917603..917800,917952..>917958))	Acanthamoeba castellanii str. Neff	14920279
ACA1_268770	mRNA	ACA1_268770	NW_004457532.1	918261	930141	R	ACA1_268770	complement(join(<918261..918568,918743..918959,919276..919503,919628..919966,920147..920278,920403..920534,920627..920752,920827..921038,921169..921274,921418..921587,921825..922059,922259..922636,922718..922934,923022..923176,923430..923585,923738..923939,924037..924101,924239..924360,924472..924637,924751..924828,925020..925112,925257..925385,925656..925785,925897..926048,926242..926346,927179..927282,927523..927623,927722..927843,928055..928189,928390..928559,928723..928939,929161..929271,929371..929521,929678..>930141))	Acanthamoeba castellanii str. Neff	14920280
ACA1_268880	mRNA	ACA1_268880	NW_004457532.1	930327	931133	D	ACA1_268880	join(<930327..930386,930492..930738,930988..>931133)	Acanthamoeba castellanii str. Neff	14920281
ACA1_268890	mRNA	ACA1_268890	NW_004457532.1	931715	932906	D	ACA1_268890	join(<931715..931852,932092..932210,932422..932495,932647..>932906)	Acanthamoeba castellanii str. Neff	14920282
ACA1_268900	mRNA	ACA1_268900	NW_004457532.1	933031	934276	D	ACA1_268900	join(<933031..933282,933368..933427,933658..933783,933925..934098,934259..>934276)	Acanthamoeba castellanii str. Neff	14920283
ACA1_268910	mRNA	ACA1_268910	NW_004457532.1	937149	938758	R	ACA1_268910	complement(join(<937149..937859,937952..938197,938296..938348,938422..938629,938750..>938758))	Acanthamoeba castellanii str. Neff	14920284
ACA1_268920	mRNA	ACA1_268920	NW_004457532.1	939024	943775	R	ACA1_268920	complement(join(<939024..939702,939859..940037,940122..940263,940416..940624,940761..941444,941677..941914,942059..942148,942263..942403,942512..942622,942744..942913,942929..942990,943376..>943775))	Acanthamoeba castellanii str. Neff	14920285
ACA1_268930	mRNA	ACA1_268930	NW_004457532.1	944241	946424	D	ACA1_268930	join(<944241..944267,944368..944457,944618..944740,944881..945051,945141..945260,945363..945505,945665..946301,946362..>946424)	Acanthamoeba castellanii str. Neff	14920286
ACA1_268940	mRNA	ACA1_268940	NW_004457532.1	946636	949569	R	ACA1_268940	complement(join(<946636..946782,947126..947244,947327..947385,948246..949387,949531..>949569))	Acanthamoeba castellanii str. Neff	14920287
ACA1_269150	mRNA	ACA1_269150	NW_004457532.1	951327	959311	D	ACA1_269150	join(<951327..951468,951753..951956,952127..952181,952402..952417,952511..952551,952647..952769,952995..953001,953182..953449,953534..953611,953776..953996,954074..954169,954257..955755,955867..955891,956076..956236,956370..956765,957060..957117,957245..957554,957684..957782,958003..958083,958183..958268,958462..958519,958605..958683,958807..958879,959000..959106,959212..>959311)	Acanthamoeba castellanii str. Neff	14920288
ACA1_269260	mRNA	ACA1_269260	NW_004457532.1	959466	960889	R	ACA1_269260	complement(join(<959466..959544,959685..959768,959844..959981,960105..960246,960381..960397,960510..960577,960676..960749,960856..>960889))	Acanthamoeba castellanii str. Neff	14920289
ACA1_269270	mRNA	ACA1_269270	NW_004457532.1	961364	963131	D	ACA1_269270	join(<961364..961793,961912..961979,962103..962223,962344..962462,962616..>963131)	Acanthamoeba castellanii str. Neff	14920290
ACA1_269280	mRNA	ACA1_269280	NW_004457532.1	963830	965298	R	ACA1_269280	complement(join(<963830..964272,964434..964523,964605..964944,965014..>965298))	Acanthamoeba castellanii str. Neff	14920291
ACA1_269290	mRNA	ACA1_269290	NW_004457532.1	965436	967414	D	ACA1_269290	join(<965436..965510,965562..965618,965629..965717,965837..966006,966177..966277,966398..966527,966626..966738,966828..966912,967011..>967414)	Acanthamoeba castellanii str. Neff	14920292
ACA1_269300	mRNA	ACA1_269300	NW_004457532.1	967540	968113	R	ACA1_269300	complement(join(<967540..967672,967833..967910,968004..>968113))	Acanthamoeba castellanii str. Neff	14920293
ACA1_269310	mRNA	ACA1_269310	NW_004457532.1	968295	970904	R	ACA1_269310	complement(join(<968295..968330,968452..968504,968608..968680,968805..968920,969005..969133,969222..969460,969557..969708,969882..969944,970064..970198,970295..970383,970509..970536,970669..970806,970881..>970904))	Acanthamoeba castellanii str. Neff	14920294
ACA1_269320	mRNA	ACA1_269320	NW_004457532.1	971155	972517	R	ACA1_269320	complement(join(<971155..971302,971372..971642,971722..971980,972072..972191,972320..>972517))	Acanthamoeba castellanii str. Neff	14920295
ACA1_269330	mRNA	ACA1_269330	NW_004457532.1	972619	973241	R	ACA1_269330	complement(join(<972619..972812,972901..972987,973091..>973241))	Acanthamoeba castellanii str. Neff	14920296
ACA1_269340	mRNA	ACA1_269340	NW_004457532.1	973908	976717	R	ACA1_269340	complement(join(<973908..974059,974166..974292,974379..974454,974564..974718,974798..974913,974988..975129,975213..975374,975459..975641,975763..975903,976025..976123,976291..976370,976482..976555,976638..>976717))	Acanthamoeba castellanii str. Neff	14920297
ACA1_269350	mRNA	ACA1_269350	NW_004457532.1	977158	983717	R	ACA1_269350	complement(join(<977158..977383,977478..977622,977745..978003,978197..978389,978472..978581,978665..978758,978832..979108,979242..979425,979531..979693,979795..980003,980124..980377,980483..980573,980676..980777,980873..981000,981112..981442,981539..981630,981695..981705,981722..981809,981933..981998,982072..982208,982282..982377,982469..982557,982665..982784,982910..983042,983143..983276,983386..983412,983452..983570,983651..>983717))	Acanthamoeba castellanii str. Neff	14920298
ACA1_269360	mRNA	ACA1_269360	NW_004457532.1	984139	984814	D	ACA1_269360	join(<984139..984178,984308..984399,984441..984573,984639..>984814)	Acanthamoeba castellanii str. Neff	14920299
ACA1_269370	mRNA	ACA1_269370	NW_004457532.1	985908	990254	D	ACA1_269370	join(<985908..987220,987277..987500,987541..987882,988071..988175,988297..989527,989653..989744,989845..989902,990011..990060,990121..>990254)	Acanthamoeba castellanii str. Neff	14920300
ACA1_269380	mRNA	ACA1_269380	NW_004457532.1	990747	993297	D	ACA1_269380	join(<990747..991130,991245..991275,991378..991502,991636..>993297)	Acanthamoeba castellanii str. Neff	14920301
ACA1_269390	mRNA	ACA1_269390	NW_004457532.1	993754	995929	D	ACA1_269390	join(<993754..993928,994008..994045,994152..994240,994310..994395,994544..994621,994739..994812,994944..995032,995102..995237,995386..995448,995531..995584,995705..>995929)	Acanthamoeba castellanii str. Neff	14920302
ACA1_269400	mRNA	ACA1_269400	NW_004457532.1	996060	996737	D	ACA1_269400	<996060..>996737	Acanthamoeba castellanii str. Neff	14920303
ACA1_269410	mRNA	ACA1_269410	NW_004457532.1	997102	999421	D	ACA1_269410	join(<997102..997374,997496..997725,997812..997914,998021..998087,998210..998367,998452..998583,998649..998727,998855..998965,999037..999172,999247..>999421)	Acanthamoeba castellanii str. Neff	14920304
ACA1_269430	mRNA	ACA1_269430	NW_004457532.1	1003636	1004438	D	ACA1_269430	join(<1003636..1003705,1003794..1003879,1003985..1004080,1004156..1004282,1004376..1004418,1004432..>1004438)	Acanthamoeba castellanii str. Neff	14920306
ACA1_269440	mRNA	ACA1_269440	NW_004457532.1	1004424	1005084	R	ACA1_269440	complement(join(<1004424..1004622,1004693..1004778,1004989..>1005084))	Acanthamoeba castellanii str. Neff	14920307
ACA1_269650	mRNA	ACA1_269650	NW_004457532.1	1006180	1007209	D	ACA1_269650	join(<1006180..1006249,1006338..1006423,1006504..1006599,1006675..1006801,1006895..1007022,1007049..1007093,1007126..>1007209)	Acanthamoeba castellanii str. Neff	14920308
ACA1_269660	mRNA	ACA1_269660	NW_004457532.1	1008765	1010766	D	ACA1_269660	join(<1008765..1009100,1009181..1009256,1009332..1009378,1009466..1009747,1009846..>1010766)	Acanthamoeba castellanii str. Neff	14920309
ACA1_269670	mRNA	ACA1_269670	NW_004457532.1	1010877	1013457	R	ACA1_269670	complement(join(<1010877..1010966,1011079..1011158,1011256..1011366,1011498..1011564,1011638..1011784,1011941..1011994,1012132..1012237,1012363..1012454,1012543..1012746,1012841..1012991,1013063..1013158,1013321..>1013457))	Acanthamoeba castellanii str. Neff	14920310
ACA1_269680	mRNA	ACA1_269680	NW_004457532.1	1015100	1017975	R	ACA1_269680	complement(join(<1015100..1015177,1015492..1015544,1015639..1015779,1015858..1016051,1016142..1016214,1016291..1016408,1016490..1016581,1016647..1016797,1016882..1016990,1017097..1017228,1017378..1017467,1017579..1017674,1017809..>1017975))	Acanthamoeba castellanii str. Neff	14920311
ACA1_269690	mRNA	ACA1_269690	NW_004457532.1	1018300	1019250	D	ACA1_269690	join(<1018300..1018474,1018577..>1019250)	Acanthamoeba castellanii str. Neff	14920312
ACA1_269700	mRNA	ACA1_269700	NW_004457532.1	1019375	1020377	R	ACA1_269700	complement(join(<1019375..1019433,1019547..1019702,1019786..1019976,1020101..1020199,1020298..>1020377))	Acanthamoeba castellanii str. Neff	14920313
ACA1_269710	mRNA	ACA1_269710	NW_004457532.1	1020780	1025069	D	ACA1_269710	join(<1020780..1022823,1022925..1023029,1023130..1023210,1023331..1023427,1023570..1023689,1023799..1023943,1024111..1024213,1024334..1024395,1024497..1024593,1024694..1024827,1024941..>1025069)	Acanthamoeba castellanii str. Neff	14920314
ACA1_269720	mRNA	ACA1_269720	NW_004457532.1	1025432	1026425	D	ACA1_269720	join(<1025432..1025606,1025736..1025879,1025996..1026122,1026209..1026247,1026335..>1026425)	Acanthamoeba castellanii str. Neff	14920315
ACA1_269730	mRNA	ACA1_269730	NW_004457532.1	1026625	1029411	D	ACA1_269730	join(<1026625..1026630,1026720..1026795,1026910..1027056,1027220..1027320,1027476..1027580,1027747..1027788,1027933..1028102,1028228..1028806,1028882..1029026,1029107..1029176,1029257..>1029411)	Acanthamoeba castellanii str. Neff	14920316
ACA1_269740	mRNA	ACA1_269740	NW_004457532.1	1029508	1031748	R	ACA1_269740	complement(join(<1029508..1029624,1029923..1030089,1030184..1030244,1030396..1030516,1030641..1030744,1030905..1030979,1031075..1031182,1031330..1031496,1031640..>1031748))	Acanthamoeba castellanii str. Neff	14920317
ACA1_269750	mRNA	ACA1_269750	NW_004457532.1	1031852	1032811	D	ACA1_269750	join(<1031852..1032178,1032261..1032282,1032379..1032454,1032556..1032640,1032737..>1032811)	Acanthamoeba castellanii str. Neff	14920318
ACA1_269760	mRNA	ACA1_269760	NW_004457532.1	1033276	1035022	D	ACA1_269760	join(<1033276..1033660,1033792..1034685,1034817..>1035022)	Acanthamoeba castellanii str. Neff	14920319
ACA1_269770	mRNA	ACA1_269770	NW_004457532.1	1035444	1037113	D	ACA1_269770	join(<1035444..1035923,1036010..1036137,1036234..1036335,1036607..1036883,1036976..>1037113)	Acanthamoeba castellanii str. Neff	14920320
ACA1_269780	mRNA	ACA1_269780	NW_004457532.1	1038755	1041378	R	ACA1_269780	complement(join(<1038755..1039830,1039938..1039998,1040154..1040247,1040520..1040671,1040836..1040976,1041074..1041137,1041269..>1041378))	Acanthamoeba castellanii str. Neff	14920321
ACA1_269790	mRNA	ACA1_269790	NW_004457532.1	1042970	1045922	R	ACA1_269790	complement(join(<1042970..1043096,1043218..1043333,1043446..1043637,1043729..1043808,1043889..1043981,1044088..1044161,1044266..1044354,1044456..1044609,1044775..1044873,1044996..1045023,1045119..1045173,1045282..1045374,1045581..>1045922))	Acanthamoeba castellanii str. Neff	14920322
ACA1_269800	mRNA	ACA1_269800	NW_004457532.1	1046864	1048197	D	ACA1_269800	join(<1046864..1046983,1047130..1047429,1047481..1047753,1047832..1047911,1047997..1048069,1048093..>1048197)	Acanthamoeba castellanii str. Neff	14920323
ACA1_269810	mRNA	ACA1_269810	NW_004457532.1	1048401	1049394	R	ACA1_269810	complement(join(<1048401..1048580,1048666..1048773,1049053..>1049394))	Acanthamoeba castellanii str. Neff	14920324
ACA1_269820	mRNA	ACA1_269820	NW_004457532.1	1049908	1050750	D	ACA1_269820	<1049908..>1050750	Acanthamoeba castellanii str. Neff	14920325
ACA1_269830	mRNA	ACA1_269830	NW_004457532.1	1051255	1056803	D	ACA1_269830	join(<1051255..1051445,1051586..1051736,1051851..1051956,1052070..1052278,1052362..1052454,1052625..1052786,1052893..1052957,1053103..1053244,1053311..1053449,1053551..1053650,1053768..1053926,1053975..1054263,1054370..1054650,1054745..1054923,1055016..1055108,1055208..1055230,1055454..1055598,1055664..1055856,1055953..1056235,1056324..1056579,1056709..>1056803)	Acanthamoeba castellanii str. Neff	14920326
ACA1_270160	mRNA	ACA1_270160	NW_004457532.1	1065748	1066691	R	ACA1_270160	complement(join(<1065748..1066194,1066269..1066346,1066512..>1066691))	Acanthamoeba castellanii str. Neff	14920329
ACA1_270170	mRNA	ACA1_270170	NW_004457532.1	1066934	1068889	R	ACA1_270170	complement(join(<1066934..1067660,1067730..1068058,1068320..>1068889))	Acanthamoeba castellanii str. Neff	14920330
ACA1_270180	mRNA	ACA1_270180	NW_004457532.1	1069137	1071670	R	ACA1_270180	complement(join(<1069137..1069322,1069402..1069477,1069580..1069694,1069770..1069880,1070012..1070158,1070238..1070394,1070487..1070553,1070689..1070832,1070939..1071033,1071109..1071223,1071330..1071402,1071481..>1071670))	Acanthamoeba castellanii str. Neff	14920331
ACA1_270190	mRNA	ACA1_270190	NW_004457532.1	1073568	1075257	R	ACA1_270190	complement(join(<1073568..1074224,1074271..>1075257))	Acanthamoeba castellanii str. Neff	14920332
ACA1_270200	mRNA	ACA1_270200	NW_004457532.1	1076032	1078709	R	ACA1_270200	complement(join(<1076032..1076205,1076300..1076475,1076594..1076690,1076776..1076880,1076968..1077138,1077316..1077393,1077428..1077559,1077648..1077763,1077888..1078175,1078261..1078425,1078508..>1078709))	Acanthamoeba castellanii str. Neff	14920333
ACA1_270210	mRNA	ACA1_270210	NW_004457532.1	1078855	1079317	R	ACA1_270210	complement(join(<1078855..1079151,1079216..>1079317))	Acanthamoeba castellanii str. Neff	14920334
ACA1_270220	mRNA	ACA1_270220	NW_004457532.1	1079459	1080240	R	ACA1_270220	complement(join(<1079459..1079632,1079709..1079801,1079956..1080065,1080144..>1080240))	Acanthamoeba castellanii str. Neff	14920335
ACA1_270230	mRNA	ACA1_270230	NW_004457532.1	1080587	1085106	D	ACA1_270230	join(<1080587..1080737,1080824..1081384,1081462..1081989,1082088..1082289,1082341..1083185,1083200..1083708,1083740..1083905,1083995..1084072,1084166..>1085106)	Acanthamoeba castellanii str. Neff	14920336
ACA1_270240	mRNA	ACA1_270240	NW_004457532.1	1085321	1087577	R	ACA1_270240	complement(join(<1085321..1085408,1085521..1085654,1085718..1085833,1085918..1086064,1086154..1086262,1086323..1086482,1086547..1086621,1086710..1086786,1086895..1086961,1087065..1087180,1087216..1087314,1087410..1087509,1087555..>1087577))	Acanthamoeba castellanii str. Neff	14920337
ACA1_270250	mRNA	ACA1_270250	NW_004457532.1	1087721	1089845	R	ACA1_270250	complement(join(<1087721..1087901,1087977..1088339,1088414..1088502,1088600..1088733,1088826..1088998,1089162..1089340,1089469..1089621,1089729..>1089845))	Acanthamoeba castellanii str. Neff	14920338
ACA1_270260	mRNA	ACA1_270260	NW_004457532.1	1090170	1091043	R	ACA1_270260	complement(join(<1090170..1090352,1090456..1090581,1090690..>1091043))	Acanthamoeba castellanii str. Neff	14920339
ACA1_270270	mRNA	ACA1_270270	NW_004457532.1	1091377	1098093	D	ACA1_270270	join(<1091377..1091934,1092169..1092306,1092426..1092506,1092639..1092732,1092819..1092904,1093053..1093190,1093273..1094196,1094274..1094308,1094433..1094501,1094591..1094670,1094758..1094859,1094920..1095193,1095303..1095394,1095532..1095677,1095760..1095872,1095957..1095994,1096163..1096182,1096323..1096448,1096590..1096745,1096857..1097510,1097656..>1098093)	Acanthamoeba castellanii str. Neff	14920340
ACA1_270280	mRNA	ACA1_270280	NW_004457532.1	1099136	1099981	D	ACA1_270280	<1099136..>1099981	Acanthamoeba castellanii str. Neff	14920341
ACA1_270300	mRNA	ACA1_270300	NW_004457532.1	1105549	1106575	D	ACA1_270300	join(<1105549..1105788,1105911..1106021,1106131..1106236,1106325..>1106575)	Acanthamoeba castellanii str. Neff	14920343
ACA1_270310	mRNA	ACA1_270310	NW_004457532.1	1106701	1108203	R	ACA1_270310	complement(join(<1106701..1106895,1106983..1107134,1107247..1107320,1107433..1107482,1107493..1107693,1107823..1108022,1108116..>1108203))	Acanthamoeba castellanii str. Neff	14920344
ACA1_270320	mRNA	ACA1_270320	NW_004457532.1	1108646	1112165	D	ACA1_270320	join(<1108646..1108759,1109043..1109224,1109351..1109481,1109492..1109553,1109800..1110035,1110082..1110170,1110331..1110341,1110554..1110771,1110880..1111070,1111166..1111239,1111354..1111472,1111561..1111633,1111759..1111796,1111876..1111951,1112052..>1112165)	Acanthamoeba castellanii str. Neff	14920345
ACA1_270330	mRNA	ACA1_270330	NW_004457532.1	1112759	1114435	R	ACA1_270330	complement(join(<1112759..1113474,1113556..>1114435))	Acanthamoeba castellanii str. Neff	14920346
ACA1_270340	mRNA	ACA1_270340	NW_004457532.1	1114777	1115244	D	ACA1_270340	<1114777..>1115244	Acanthamoeba castellanii str. Neff	14920347
ACA1_270350	mRNA	ACA1_270350	NW_004457532.1	1115347	1116948	R	ACA1_270350	complement(join(<1115347..1115586,1115776..1115895,1115978..1116098,1116180..1116405,1116498..>1116948))	Acanthamoeba castellanii str. Neff	14920348
ACA1_270360	mRNA	ACA1_270360	NW_004457532.1	1117206	1122040	R	ACA1_270360	complement(join(<1117206..1117318,1117409..1117630,1117724..1117847,1117922..1118027,1118111..1118268,1118372..1118448,1118523..1118601,1118695..1118786,1118914..1119022,1119095..1119219,1119327..1119446,1119534..1119956,1120040..1120250,1120341..1120612,1120692..1120845,1120944..1120999,1121058..1121148,1121201..1121347,1121434..1121558,1121628..1121792,1121914..>1122040))	Acanthamoeba castellanii str. Neff	14920349
ACA1_270370	mRNA	ACA1_270370	NW_004457532.1	1122813	1123950	D	ACA1_270370	join(<1122813..1122894,1122987..1123104,1123266..1123368,1123472..1123539,1123622..1123786,1123938..>1123950)	Acanthamoeba castellanii str. Neff	14920350
ACA1_270480	mRNA	ACA1_270480	NW_004457532.1	1128376	1128844	R	ACA1_270480	complement(join(<1128376..1128419,1128470..1128570,1128620..1128688,1128798..>1128844))	Acanthamoeba castellanii str. Neff	14920351
ACA1_270490	mRNA	ACA1_270490	NW_004457532.1	1129347	1130033	R	ACA1_270490	complement(<1129347..>1130033)	Acanthamoeba castellanii str. Neff	14920352
ACA1_270500	mRNA	ACA1_270500	NW_004457532.1	1130235	1136431	R	ACA1_270500	complement(join(<1130235..1130885,1130980..1131045,1131140..1131232,1131364..1131447,1131576..1131683,1131781..1131876,1134122..1134603,1134888..1135031,1135279..1135339,1135444..1135549,1136310..>1136431))	Acanthamoeba castellanii str. Neff	14920353
ACA1_270610	mRNA	ACA1_270610	NW_004457532.1	1136972	1140265	R	ACA1_270610	complement(join(<1136972..1137343,1137449..1137516,1137623..1137983,1138141..1138549,1138645..1139153,1139269..1139384,1139474..1139588,1139664..1139694,1139761..1139834,1139910..1139987,1140046..1140121,1140216..>1140265))	Acanthamoeba castellanii str. Neff	14920354
ACA1_270620	mRNA	ACA1_270620	NW_004457532.1	1140794	1145115	R	ACA1_270620	complement(join(<1140794..1140977,1141042..1141294,1141367..1141446,1141536..1141660,1141743..1141858,1141950..1142040,1142132..1142283,1142357..1142505,1142592..1142795,1142888..1142976,1143064..1143170,1143306..1143387,1143517..1143646,1143727..1143810,1143891..1143983,1144072..1144162,1144249..1144334,1144419..1144542,1144641..1144788,1144864..1144945,1145012..>1145115))	Acanthamoeba castellanii str. Neff	14920355
ACA1_270630	mRNA	ACA1_270630	NW_004457532.1	1145193	1145636	R	ACA1_270630	complement(<1145193..>1145636)	Acanthamoeba castellanii str. Neff	14920356
ACA1_270640	mRNA	ACA1_270640	NW_004457532.1	1145710	1147041	R	ACA1_270640	complement(join(<1145710..1145867,1145961..1146076,1146179..1146367,1146446..1146543,1146664..>1147041))	Acanthamoeba castellanii str. Neff	14920357
ACA1_270650	mRNA	ACA1_270650	NW_004457532.1	1147737	1148138	D	ACA1_270650	join(<1147737..1147915,1148024..>1148138)	Acanthamoeba castellanii str. Neff	14920358
ACA1_270660	mRNA	ACA1_270660	NW_004457532.1	1148364	1149086	R	ACA1_270660	complement(join(<1148364..1148461,1148528..1148624,1148709..1148888,1148952..>1149086))	Acanthamoeba castellanii str. Neff	14920359
ACA1_270670	mRNA	ACA1_270670	NW_004457532.1	1149733	1150185	R	ACA1_270670	complement(<1149733..>1150185)	Acanthamoeba castellanii str. Neff	14920360
ACA1_270690	mRNA	ACA1_270690	NW_004457532.1	1154623	1157233	D	ACA1_270690	join(<1154623..1154696,1154796..1155256,1155384..1155546,1155639..1155778,1155853..1156125,1156223..1156372,1156447..1156618,1156706..1156844,1156940..1157075,1157107..1157126,1157165..>1157233)	Acanthamoeba castellanii str. Neff	14920362
ACA1_270700	mRNA	ACA1_270700	NW_004457532.1	1157670	1161500	D	ACA1_270700	join(<1157670..1157793,1157896..1157934,1158059..1158161,1158286..1158406,1158554..1158677,1158771..1158810,1158914..1159015,1159083..1159131,1159216..1159324,1159439..1159527,1159604..1159648,1159766..1159919,1159996..1160254,1160356..1160459,1160548..1160598,1160673..1160744,1160826..1160920,1161161..1161229,1161320..1161386,1161484..>1161500)	Acanthamoeba castellanii str. Neff	14920363
ACA1_270810	mRNA	ACA1_270810	NW_004457532.1	1162208	1163390	D	ACA1_270810	join(<1162208..1162318,1162453..1162552,1162634..1162728,1162822..1162947,1163030..1163098,1163194..1163275,1163374..>1163390)	Acanthamoeba castellanii str. Neff	14920364
ACA1_270930	mRNA	ACA1_270930	NW_004457532.1	1170674	1171099	D	ACA1_270930	join(<1170674..1170781,1170818..>1171099)	Acanthamoeba castellanii str. Neff	14920366
ACA1_270940	mRNA	ACA1_270940	NW_004457532.1	1171316	1172405	R	ACA1_270940	complement(join(<1171316..1171557,1171655..1172125,1172192..>1172405))	Acanthamoeba castellanii str. Neff	14920367
ACA1_270950	mRNA	ACA1_270950	NW_004457532.1	1172556	1176948	R	ACA1_270950	complement(join(<1172556..1173164,1173298..1173390,1173503..1173610,1173690..1173768,1173864..1174011,1174107..1174453,1174511..1174702,1174769..1174907,1176223..1176442,1176549..1176622,1176744..1176810,1176861..>1176948))	Acanthamoeba castellanii str. Neff	14920368
ACA1_031780	mRNA	ACA1_031780	NW_004457530.1	361	2118	R	ACA1_031780	complement(join(<361..628,718..804,905..978,1098..1238,1326..1398,1475..1566,1639..1694,1845..1935,2029..>2118))	Acanthamoeba castellanii str. Neff	14919981
ACA1_031790	mRNA	ACA1_031790	NW_004457530.1	2573	4964	D	ACA1_031790	join(<2573..2746,2769..2850,3011..3111,3200..3273,3411..3510,3591..3687,3810..3908,4005..4130,4244..4321,4446..4512,4592..4698,4831..>4964)	Acanthamoeba castellanii str. Neff	14919968
ACA1_031800	mRNA	ACA1_031800	NW_004457530.1	5294	8657	D	ACA1_031800	join(<5294..5306,5475..5558,5623..5716,5986..6125,6223..6323,6434..6661,6815..6922,7062..7231,7325..7367,7457..7565,7674..7750,7826..7893,7991..>8657)	Acanthamoeba castellanii str. Neff	14919969
ACA1_031810	mRNA	ACA1_031810	NW_004457530.1	9200	9864	D	ACA1_031810	join(<9200..9379,9445..9558,9580..>9864)	Acanthamoeba castellanii str. Neff	14919959
ACA1_031820	mRNA	ACA1_031820	NW_004457530.1	10464	14352	D	ACA1_031820	join(<10464..10475,10643..10807,10923..11141,11213..11300,11397..11961,12042..>14352)	Acanthamoeba castellanii str. Neff	14919960
ACA1_031830	mRNA	ACA1_031830	NW_004457530.1	14530	16008	D	ACA1_031830	join(<14530..14683,14780..14943,15025..15184,15291..15515,15602..15712,15926..>16008)	Acanthamoeba castellanii str. Neff	14919961
ACA1_031840	mRNA	ACA1_031840	NW_004457530.1	18101	18641	R	ACA1_031840	complement(join(<18101..18119,18146..18374,18391..18568,18579..>18641))	Acanthamoeba castellanii str. Neff	14919962
ACA1_031850	mRNA	ACA1_031850	NW_004457530.1	19572	22153	R	ACA1_031850	complement(join(<19572..19619,19759..19968,20039..20147,20236..20329,20467..20561,20620..20699,20798..20867,21041..21117,21278..>22153))	Acanthamoeba castellanii str. Neff	14919963
ACA1_031860	mRNA	ACA1_031860	NW_004457530.1	22501	24088	D	ACA1_031860	join(<22501..22604,22681..22804,22913..23015,23096..23453,23584..23697,23854..>24088)	Acanthamoeba castellanii str. Neff	14919964
ACA1_031870	mRNA	ACA1_031870	NW_004457530.1	24244	25415	R	ACA1_031870	complement(join(<24244..24346,24465..24541,24632..24675,24773..24830,24949..25004,25152..25258,25339..>25415))	Acanthamoeba castellanii str. Neff	14919965
ACA1_031880	mRNA	ACA1_031880	NW_004457530.1	26132	26932	R	ACA1_031880	complement(<26132..>26932)	Acanthamoeba castellanii str. Neff	14919966
ACA1_031890	mRNA	ACA1_031890	NW_004457530.1	27548	32923	D	ACA1_031890	join(<27548..30484,30677..>32923)	Acanthamoeba castellanii str. Neff	14919967
ACA1_031900	mRNA	ACA1_031900	NW_004457530.1	32998	34674	R	ACA1_031900	complement(join(<32998..33624,33768..33904,33971..34124,34189..34568,34635..>34674))	Acanthamoeba castellanii str. Neff	14919970
ACA1_031910	mRNA	ACA1_031910	NW_004457530.1	34913	35653	R	ACA1_031910	complement(join(<34913..35061,35163..35262,35395..35514,35618..>35653))	Acanthamoeba castellanii str. Neff	14919971
ACA1_031920	mRNA	ACA1_031920	NW_004457530.1	35912	37057	R	ACA1_031920	complement(join(<35912..35975,36077..36133,36216..36341,36422..36654,36761..36883,36959..>37057))	Acanthamoeba castellanii str. Neff	14919972
ACA1_031930	mRNA	ACA1_031930	NW_004457530.1	37156	38035	D	ACA1_031930	join(<37156..37295,37445..37533,37628..37713,37813..37918,38010..>38035)	Acanthamoeba castellanii str. Neff	14919973
ACA1_031940	mRNA	ACA1_031940	NW_004457530.1	38400	39126	D	ACA1_031940	join(<38400..38606,38686..38805,38875..>39126)	Acanthamoeba castellanii str. Neff	14919974
ACA1_031950	mRNA	ACA1_031950	NW_004457530.1	39604	41106	D	ACA1_031950	join(<39604..39720,39830..39898,39980..40094,40181..40271,40346..40451,40539..40636,40714..40789,40867..>41106)	Acanthamoeba castellanii str. Neff	14919975
ACA1_031960	mRNA	ACA1_031960	NW_004457530.1	41450	42723	D	ACA1_031960	join(<41450..41688,41768..41818,41887..42151,42225..42352,42429..42516,42607..>42723)	Acanthamoeba castellanii str. Neff	14919976
ACA1_031970	mRNA	ACA1_031970	NW_004457530.1	42879	44950	D	ACA1_031970	join(<42879..43174,43389..43408,43460..43519,43799..43935,44066..44294,44544..44625,44709..44794,44925..>44950)	Acanthamoeba castellanii str. Neff	14919977
ACA1_031980	mRNA	ACA1_031980	NW_004457530.1	45046	45733	R	ACA1_031980	complement(join(<45046..45365,45463..45510,45577..>45733))	Acanthamoeba castellanii str. Neff	14919978
ACA1_031990	mRNA	ACA1_031990	NW_004457530.1	45828	49565	R	ACA1_031990	complement(join(<45828..46646,46816..46898,46993..47481,47602..47670,47746..47847,47926..48038,48471..48562,48758..48837,48981..49090,49181..49265,49460..>49565))	Acanthamoeba castellanii str. Neff	14919979
ACA1_032000	mRNA	ACA1_032000	NW_004457530.1	50253	53264	D	ACA1_032000	join(<50253..51018,51141..51230,51327..51414,51501..51851,51964..52077,52155..52635,52719..52797,52887..53050,53166..>53264)	Acanthamoeba castellanii str. Neff	14919980
ACA1_007510	mRNA	ACA1_007510	NW_004457528.1	3156	3538	D	ACA1_007510	join(<3156..3243,3317..3466,3531..>3538)	Acanthamoeba castellanii str. Neff	14919958
ACA1_007620	mRNA	ACA1_007620	NW_004457528.1	9844	10803	D	ACA1_007620	join(<9844..9982,10163..>10803)	Acanthamoeba castellanii str. Neff	14919957
ACA1_335880	mRNA	ACA1_335880	NW_004457526.1	82	485	R	ACA1_335880	complement(join(<82..186,336..>485))	Acanthamoeba castellanii str. Neff	14919930
ACA1_335890	mRNA	ACA1_335890	NW_004457526.1	615	2574	R	ACA1_335890	complement(join(<615..803,914..1039,1111..1169,1266..1315,1406..1592,1690..1823,1927..1996,2078..2148,2243..2290,2388..2478,2547..>2574))	Acanthamoeba castellanii str. Neff	14919931
ACA1_335900	mRNA	ACA1_335900	NW_004457526.1	2869	5116	D	ACA1_335900	join(<2869..3078,3171..3222,3331..3415,3509..3575,3709..3880,4031..4084,4213..4466,4546..4629,4754..>5116)	Acanthamoeba castellanii str. Neff	14919932
ACA1_335910	mRNA	ACA1_335910	NW_004457526.1	5362	6011	D	ACA1_335910	join(<5362..5475,5597..5755,5850..>6011)	Acanthamoeba castellanii str. Neff	14919933
ACA1_335920	mRNA	ACA1_335920	NW_004457526.1	6333	7022	R	ACA1_335920	complement(<6333..>7022)	Acanthamoeba castellanii str. Neff	14919934
ACA1_335930	mRNA	ACA1_335930	NW_004457526.1	7344	7746	D	ACA1_335930	join(<7344..7425,7525..7575,7685..>7746)	Acanthamoeba castellanii str. Neff	14919935
ACA1_335940	mRNA	ACA1_335940	NW_004457526.1	8082	10805	R	ACA1_335940	complement(join(<8082..8135,8207..8321,8410..8675,8806..8982,9121..9194,9296..9509,9646..9780,9871..10005,10109..10605,10790..>10805))	Acanthamoeba castellanii str. Neff	14919936
ACA1_335950	mRNA	ACA1_335950	NW_004457526.1	11177	13294	R	ACA1_335950	complement(<11177..>13294)	Acanthamoeba castellanii str. Neff	14919937
ACA1_335960	mRNA	ACA1_335960	NW_004457526.1	13309	14086	R	ACA1_335960	complement(join(<13309..13435,13776..13862,13944..>14086))	Acanthamoeba castellanii str. Neff	14919938
ACA1_335970	mRNA	ACA1_335970	NW_004457526.1	14347	16394	R	ACA1_335970	complement(join(<14347..14596,14690..14898,15058..15198,15290..15375,15460..15619,15728..15821,15954..16065,16181..>16394))	Acanthamoeba castellanii str. Neff	14919939
ACA1_335980	mRNA	ACA1_335980	NW_004457526.1	16715	18342	R	ACA1_335980	complement(join(<16715..17041,17265..17406,17503..17627,17721..17932,18156..>18342))	Acanthamoeba castellanii str. Neff	14919940
ACA1_335990	mRNA	ACA1_335990	NW_004457526.1	18462	20975	D	ACA1_335990	join(<18462..18479,18623..18738,18844..19001,19152..19244,19710..19739,19764..19838,19970..20040,20151..20241,20365..20456,20620..20723,20870..>20975)	Acanthamoeba castellanii str. Neff	14919941
ACA1_336100	mRNA	ACA1_336100	NW_004457526.1	24209	25100	R	ACA1_336100	complement(join(<24209..24490,24580..24873,24959..24993,25094..>25100))	Acanthamoeba castellanii str. Neff	14919942
ACA1_336110	mRNA	ACA1_336110	NW_004457526.1	25267	26847	R	ACA1_336110	complement(join(<25267..25719,25911..26010,26139..26221,26282..26373,26478..26564,26688..>26847))	Acanthamoeba castellanii str. Neff	14919943
ACA1_336120	mRNA	ACA1_336120	NW_004457526.1	27222	29651	D	ACA1_336120	join(<27222..27863,27963..>29651)	Acanthamoeba castellanii str. Neff	14919944
ACA1_336130	mRNA	ACA1_336130	NW_004457526.1	30002	33782	R	ACA1_336130	complement(join(<30002..30135,30261..30413,30744..31919,32009..32160,32405..32756,32834..32939,33038..33144,33219..33361,33455..33581,33692..>33782))	Acanthamoeba castellanii str. Neff	14919945
ACA1_336140	mRNA	ACA1_336140	NW_004457526.1	34295	35623	R	ACA1_336140	complement(join(<34295..34567,34637..34752,34833..35381,35521..>35623))	Acanthamoeba castellanii str. Neff	14919946
ACA1_336150	mRNA	ACA1_336150	NW_004457526.1	36005	42349	D	ACA1_336150	join(<36005..36168,36360..36418,36550..36661,36743..36856,37053..37845,37958..38026,38124..38247,38353..38441,38545..38642,38731..38845,38946..39011,39096..39179,39325..39483,39586..39680,39784..40456,40532..40660,40816..40938,41036..41074,41272..41433,41518..41640,41703..41804,41879..42043,42155..>42349)	Acanthamoeba castellanii str. Neff	14919947
ACA1_336160	mRNA	ACA1_336160	NW_004457526.1	43660	48792	D	ACA1_336160	join(<43660..43665,43729..43929,44035..44084,44180..44334,44426..44557,44671..44891,44977..45461,45540..45695,47963..48114,48203..48273,48385..48468,48557..48614,48704..>48792)	Acanthamoeba castellanii str. Neff	14919948
ACA1_336370	mRNA	ACA1_336370	NW_004457526.1	52148	52882	D	ACA1_336370	<52148..>52882	Acanthamoeba castellanii str. Neff	14919949
ACA1_336380	mRNA	ACA1_336380	NW_004457526.1	53672	58245	R	ACA1_336380	complement(join(<53672..54200,54304..54492,54568..54829,54906..55110,55202..55372,55491..55583,55698..56011,56080..56143,56248..56343,56494..56732,56833..56958,57123..57281,57600..>58245))	Acanthamoeba castellanii str. Neff	14919950
ACA1_336390	mRNA	ACA1_336390	NW_004457526.1	59034	67609	D	ACA1_336390	join(<59034..59114,59277..59349,59468..59583,59740..60004,60113..60234,60349..60498,60597..60716,60847..60968,61103..61267,61358..61422,61536..61622,61701..61903,61996..62171,62259..62409,62525..62681,62785..62880,62980..63143,63198..63284,63347..63463,63555..63794,63870..64058,64153..64282,64350..64494,64600..64668,64777..64927,65021..65124,65213..65318,65414..65530,65629..65778,65864..66055,66163..66541,66639..66829,66965..67045,67240..67383,67463..>67609)	Acanthamoeba castellanii str. Neff	14919951
ACA1_336400	mRNA	ACA1_336400	NW_004457526.1	67968	69302	D	ACA1_336400	<67968..>69302	Acanthamoeba castellanii str. Neff	14919952
ACA1_336410	mRNA	ACA1_336410	NW_004457526.1	69559	71652	D	ACA1_336410	join(<69559..69748,70014..70145,70231..70353,70480..70611,70700..70825,70930..71006,71128..71260,71378..>71652)	Acanthamoeba castellanii str. Neff	14919953
ACA1_336420	mRNA	ACA1_336420	NW_004457526.1	71702	73018	R	ACA1_336420	complement(<71702..>73018)	Acanthamoeba castellanii str. Neff	14919954
ACA1_336430	mRNA	ACA1_336430	NW_004457526.1	73316	75573	R	ACA1_336430	complement(join(<73316..73444,73559..73640,73738..73870,73980..74159,74240..74361,74501..74628,74752..74795,74883..75326,75531..>75573))	Acanthamoeba castellanii str. Neff	14919955
ACA1_336440	mRNA	ACA1_336440	NW_004457526.1	76889	78432	R	ACA1_336440	complement(join(<76889..77037,77149..77188,77305..77399,77540..77620,77704..77740,78085..78250,78335..>78432))	Acanthamoeba castellanii str. Neff	14919956
ACA1_301220	mRNA	ACA1_301220	NW_004457524.1	258	4064	R	ACA1_301220	complement(join(<258..266,352..518,601..820,917..1000,1084..1188,1299..1411,1515..1613,1734..1792,1881..1979,2080..2241,2335..2429,2553..2818,2925..3046,3170..3309,3414..3548,3663..3808,3877..3907,3990..>4064))	Acanthamoeba castellanii str. Neff	14919929
ACA1_301230	mRNA	ACA1_301230	NW_004457524.1	4196	6862	R	ACA1_301230	complement(join(<4196..4291,4363..4448,4540..4634,4712..4809,4873..5071,5170..5237,5385..5519,5606..5743,5825..5881,6003..6306,6342..6401,6421..6647,6731..>6862))	Acanthamoeba castellanii str. Neff	14919926
ACA1_301240	mRNA	ACA1_301240	NW_004457524.1	6985	7817	D	ACA1_301240	join(<6985..7149,7237..7377,7536..7657,7748..>7817)	Acanthamoeba castellanii str. Neff	14919925
ACA1_301250	mRNA	ACA1_301250	NW_004457524.1	8029	9585	R	ACA1_301250	complement(join(<8029..8096,8197..8349,8434..8512,8595..8645,8736..8880,9001..9091,9150..9238,9356..9415,9500..>9585))	Acanthamoeba castellanii str. Neff	14919927
ACA1_301260	mRNA	ACA1_301260	NW_004457524.1	9900	11916	R	ACA1_301260	complement(join(<9900..10439,10522..10839,10942..11092,11201..11338,11433..11555,11665..11738,11845..>11916))	Acanthamoeba castellanii str. Neff	14919928
ACA1_323310	mRNA	ACA1_323310	NW_004457522.1	444	2038	D	ACA1_323310	join(<444..572,653..853,933..988,1066..1691,1772..1842,1928..>2038)	Acanthamoeba castellanii str. Neff	14919924
ACA1_323320	mRNA	ACA1_323320	NW_004457522.1	2099	3626	R	ACA1_323320	complement(join(<2099..2626,2687..2959,3045..3137,3213..3311,3398..3473,3562..>3626))	Acanthamoeba castellanii str. Neff	14919908
ACA1_323330	mRNA	ACA1_323330	NW_004457522.1	3763	7279	R	ACA1_323330	complement(join(<3763..3861,3940..4038,4103..4156,4220..4383,4466..4574,4647..4760,4821..4877,4953..5095,5167..5225,5303..5424,5488..5795,6011..6074,6326..6454,6527..6604,6668..6855,6924..6964,7082..7138,7209..>7279))	Acanthamoeba castellanii str. Neff	14919917
ACA1_323340	mRNA	ACA1_323340	NW_004457522.1	7703	8388	R	ACA1_323340	complement(join(<7703..7910,7976..8059,8112..8226,8295..>8388))	Acanthamoeba castellanii str. Neff	14919914
ACA1_323350	mRNA	ACA1_323350	NW_004457522.1	8635	10480	R	ACA1_323350	complement(join(<8635..8732,8808..8912,8983..9049,9117..9197,9255..9386,9450..9563,9632..9695,9775..9857,9930..10099,10203..10312,10410..>10480))	Acanthamoeba castellanii str. Neff	14919915
ACA1_323360	mRNA	ACA1_323360	NW_004457522.1	10682	11852	R	ACA1_323360	complement(join(<10682..10732,10803..10856,10934..11022,11111..11198,11285..11367,11462..11593,11672..11740,11816..>11852))	Acanthamoeba castellanii str. Neff	14919916
ACA1_323370	mRNA	ACA1_323370	NW_004457522.1	11968	12885	R	ACA1_323370	complement(join(<11968..11999,12066..12129,12201..12393,12456..12569,12639..12780,12837..>12885))	Acanthamoeba castellanii str. Neff	14919923
ACA1_323380	mRNA	ACA1_323380	NW_004457522.1	13688	15231	R	ACA1_323380	complement(join(<13688..13754,13827..13936,14006..14088,14178..14296,14361..14689,14744..14794,14959..15067,15152..>15231))	Acanthamoeba castellanii str. Neff	14919902
ACA1_323390	mRNA	ACA1_323390	NW_004457522.1	15283	16189	R	ACA1_323390	complement(join(<15283..15417,15522..15628,15724..15806,15939..>16189))	Acanthamoeba castellanii str. Neff	14919903
ACA1_323400	mRNA	ACA1_323400	NW_004457522.1	16248	18543	R	ACA1_323400	complement(join(<16248..16375,16511..16675,16766..16831,16899..17049,17119..17247,17321..17481,17563..17713,17798..17902,17991..18106,18219..>18543))	Acanthamoeba castellanii str. Neff	14919904
ACA1_323410	mRNA	ACA1_323410	NW_004457522.1	18774	19521	R	ACA1_323410	complement(join(<18774..18961,19037..19128,19199..>19521))	Acanthamoeba castellanii str. Neff	14919905
ACA1_323420	mRNA	ACA1_323420	NW_004457522.1	19802	20785	D	ACA1_323420	join(<19802..19946,20052..20152,20284..20446,20527..20606,20699..>20785)	Acanthamoeba castellanii str. Neff	14919906
ACA1_323430	mRNA	ACA1_323430	NW_004457522.1	21033	22184	D	ACA1_323430	join(<21033..21120,21218..21313,21416..21543,21625..21742,21821..21892,21997..>22184)	Acanthamoeba castellanii str. Neff	14919907
ACA1_323440	mRNA	ACA1_323440	NW_004457522.1	22402	23382	D	ACA1_323440	join(<22402..22687,22856..>23382)	Acanthamoeba castellanii str. Neff	14919909
ACA1_323450	mRNA	ACA1_323450	NW_004457522.1	23568	23894	D	ACA1_323450	<23568..>23894	Acanthamoeba castellanii str. Neff	14919910
ACA1_323460	mRNA	ACA1_323460	NW_004457522.1	23993	26721	R	ACA1_323460	complement(join(<23993..24859,25062..25142,25257..25331,25428..25523,25615..25660,25798..25874,25973..26130,26243..26366,26677..>26721))	Acanthamoeba castellanii str. Neff	14919911
ACA1_323470	mRNA	ACA1_323470	NW_004457522.1	26936	27825	R	ACA1_323470	complement(join(<26936..27123,27231..>27825))	Acanthamoeba castellanii str. Neff	14919912
ACA1_323480	mRNA	ACA1_323480	NW_004457522.1	28549	32486	D	ACA1_323480	join(<28549..28584,28754..28862,28970..29099,29192..29309,29383..29461,29547..29744,29840..29922,30008..30100,30182..30274,30347..30447,30513..30636,30707..30884,30961..31030,31565..31760,31823..31887,31963..32109,32170..32272,32370..>32486)	Acanthamoeba castellanii str. Neff	14919913
ACA1_323490	mRNA	ACA1_323490	NW_004457522.1	32842	36521	D	ACA1_323490	join(<32842..33474,33586..33696,33801..33851,33954..34055,34134..34241,34336..34410,34508..34615,34745..34801,34932..35062,35151..35250,35396..35456,35557..35666,35789..35894,35978..36325,36415..>36521)	Acanthamoeba castellanii str. Neff	14919918
ACA1_323500	mRNA	ACA1_323500	NW_004457522.1	36805	38584	D	ACA1_323500	join(<36805..36886,36956..37305,37339..37514,37594..37766,37853..38031,38110..38247,38343..38423,38495..>38584)	Acanthamoeba castellanii str. Neff	14919919
ACA1_323510	mRNA	ACA1_323510	NW_004457522.1	39112	39849	D	ACA1_323510	join(<39112..39259,39356..>39849)	Acanthamoeba castellanii str. Neff	14919920
ACA1_323520	mRNA	ACA1_323520	NW_004457522.1	39969	41710	R	ACA1_323520	complement(join(<39969..40087,40161..40352,40389..40480,40594..40680,40752..40881,40968..41031,41118..41224,41299..41386,41443..41558,41572..>41710))	Acanthamoeba castellanii str. Neff	14919921
ACA1_323530	mRNA	ACA1_323530	NW_004457522.1	41861	43843	D	ACA1_323530	join(<41861..42176,42289..42737,42804..42919,42986..43087,43187..43592,43706..>43843)	Acanthamoeba castellanii str. Neff	14919922
ACA1_232030	mRNA	ACA1_232030	NW_004457518.1	215	1118	R	ACA1_232030	complement(join(<215..445,551..668,838..>1118))	Acanthamoeba castellanii str. Neff	14919869
ACA1_232140	mRNA	ACA1_232140	NW_004457518.1	7011	7513	D	ACA1_232140	join(<7011..7161,7235..7334,7474..>7513)	Acanthamoeba castellanii str. Neff	14919767
ACA1_232250	mRNA	ACA1_232250	NW_004457518.1	8187	8486	R	ACA1_232250	complement(<8187..>8486)	Acanthamoeba castellanii str. Neff	14919870
ACA1_232260	mRNA	ACA1_232260	NW_004457518.1	8816	11440	D	ACA1_232260	join(<8816..8922,9099..9186,9314..9428,9543..10010,10110..10337,10421..10468,10545..>11440)	Acanthamoeba castellanii str. Neff	14919871
ACA1_232270	mRNA	ACA1_232270	NW_004457518.1	11541	15775	D	ACA1_232270	join(<11541..11582,11695..11964,12087..12144,12283..12423,12540..12640,12784..12877,12957..13066,13228..13268,13548..13880,14030..14078,14501..14541,14835..15176,15456..15582,15662..>15775)	Acanthamoeba castellanii str. Neff	14919872
ACA1_232380	mRNA	ACA1_232380	NW_004457518.1	15874	17034	R	ACA1_232380	complement(join(<15874..16100,16232..16466,16532..16820,16940..>17034))	Acanthamoeba castellanii str. Neff	14919873
ACA1_232390	mRNA	ACA1_232390	NW_004457518.1	17924	18906	D	ACA1_232390	join(<17924..18005,18097..18290,18377..18668,18761..>18906)	Acanthamoeba castellanii str. Neff	14919874
ACA1_232400	mRNA	ACA1_232400	NW_004457518.1	19069	20521	R	ACA1_232400	complement(join(<19069..19166,19268..19361,19455..19526,19652..19789,19884..19960,20059..20252,20484..>20521))	Acanthamoeba castellanii str. Neff	14919875
ACA1_232410	mRNA	ACA1_232410	NW_004457518.1	20707	21893	D	ACA1_232410	join(<20707..20872,20983..21137,21259..21440,21555..21739,21823..>21893)	Acanthamoeba castellanii str. Neff	14919876
ACA1_232420	mRNA	ACA1_232420	NW_004457518.1	21971	23074	D	ACA1_232420	join(<21971..22066,22183..22374,22499..22625,22740..22853,22953..>23074)	Acanthamoeba castellanii str. Neff	14919877
ACA1_232430	mRNA	ACA1_232430	NW_004457518.1	23245	24459	D	ACA1_232430	join(<23245..23373,23450..23612,23688..23775,23842..24130,24202..>24459)	Acanthamoeba castellanii str. Neff	14919878
ACA1_232440	mRNA	ACA1_232440	NW_004457518.1	24570	26738	R	ACA1_232440	complement(join(<24570..24910,24998..25947,26032..26138,26203..26236,26332..>26738))	Acanthamoeba castellanii str. Neff	14919879
ACA1_232450	mRNA	ACA1_232450	NW_004457518.1	27383	29222	R	ACA1_232450	complement(join(<27383..28082,28177..28330,28435..28615,28713..28788,28882..29006,29043..>29222))	Acanthamoeba castellanii str. Neff	14919880
ACA1_232460	mRNA	ACA1_232460	NW_004457518.1	30647	34809	D	ACA1_232460	join(<30647..30752,30890..31101,31238..31294,31397..32573,32669..32766,32851..32990,33085..33145,33298..33406,33544..33605,33838..33964,34083..34165,34280..34369,34461..34554,34682..>34809)	Acanthamoeba castellanii str. Neff	14919881
ACA1_232470	mRNA	ACA1_232470	NW_004457518.1	35167	35738	R	ACA1_232470	complement(join(<35167..35230,35309..35445,35550..>35738))	Acanthamoeba castellanii str. Neff	14919882
ACA1_232480	mRNA	ACA1_232480	NW_004457518.1	35923	36437	R	ACA1_232480	complement(join(<35923..36063,36153..>36437))	Acanthamoeba castellanii str. Neff	14919883
ACA1_232490	mRNA	ACA1_232490	NW_004457518.1	37739	40159	D	ACA1_232490	join(<37739..38361,38640..39994,40077..>40159)	Acanthamoeba castellanii str. Neff	14919884
ACA1_232500	mRNA	ACA1_232500	NW_004457518.1	40592	42409	D	ACA1_232500	join(<40592..40888,40997..41176,41255..41351,41427..41502,41602..41725,41809..41902,41988..42125,42231..>42409)	Acanthamoeba castellanii str. Neff	14919885
ACA1_232520	mRNA	ACA1_232520	NW_004457518.1	44976	49307	D	ACA1_232520	join(<44976..45243,45419..45614,45688..45837,45967..46465,46540..46695,46892..47056,47162..47191,48226..48249,48335..48499,48605..48967,49025..49172,49252..>49307)	Acanthamoeba castellanii str. Neff	14919887
ACA1_232630	mRNA	ACA1_232630	NW_004457518.1	49784	51135	D	ACA1_232630	join(<49784..49841,49918..50129,50247..50367,50503..50586,50723..50846,50988..>51135)	Acanthamoeba castellanii str. Neff	14919888
ACA1_232640	mRNA	ACA1_232640	NW_004457518.1	51382	53166	R	ACA1_232640	complement(join(<51382..51614,51641..51715,51758..51919,52059..52628,52755..52881,53032..>53166))	Acanthamoeba castellanii str. Neff	14919889
ACA1_232650	mRNA	ACA1_232650	NW_004457518.1	53326	55944	R	ACA1_232650	complement(join(<53326..53446,53534..53726,53831..53887,53966..54157,54246..54372,54496..54608,54749..54829,54911..55017,55128..55213,55341..55459,55565..55696,55785..55820,55899..>55944))	Acanthamoeba castellanii str. Neff	14919890
ACA1_232660	mRNA	ACA1_232660	NW_004457518.1	56085	57423	D	ACA1_232660	join(<56085..56243,56424..56752,56863..56965,57076..>57423)	Acanthamoeba castellanii str. Neff	14919891
ACA1_232670	mRNA	ACA1_232670	NW_004457518.1	57698	63920	D	ACA1_232670	join(<57698..57742,57922..58042,58138..58186,58265..58434,58538..58675,58762..58883,58994..59138,59242..59575,59647..59852,59967..60230,60312..60505,60602..61607,61708..>63920)	Acanthamoeba castellanii str. Neff	14919892
ACA1_232680	mRNA	ACA1_232680	NW_004457518.1	64296	67406	D	ACA1_232680	join(<64296..65027,65195..65366,65446..65531,65730..65807,65977..66004,66109..66287,66556..66663,66793..67035,67145..67211,67312..>67406)	Acanthamoeba castellanii str. Neff	14919893
ACA1_232690	mRNA	ACA1_232690	NW_004457518.1	67992	69955	R	ACA1_232690	complement(join(<67992..68073,68166..68326,68460..68636,68738..68888,69547..69718,69784..>69955))	Acanthamoeba castellanii str. Neff	14919894
ACA1_232800	mRNA	ACA1_232800	NW_004457518.1	70285	72402	R	ACA1_232800	complement(join(<70285..70416,70515..70645,70750..70888,71008..71090,71221..71296,71415..71474,71604..71660,71843..72063,72264..>72402))	Acanthamoeba castellanii str. Neff	14919895
ACA1_232810	mRNA	ACA1_232810	NW_004457518.1	72501	75446	D	ACA1_232810	join(<72501..72613,72729..72826,73013..73079,73219..73330,73432..73775,73892..73986,74114..74223,74375..74570,74649..74763,74892..74943,75063..75095,75182..75268,75345..>75446)	Acanthamoeba castellanii str. Neff	14919896
ACA1_232820	mRNA	ACA1_232820	NW_004457518.1	75609	82994	R	ACA1_232820	complement(join(<75609..75695,75807..75905,75978..76142,76277..76383,76511..76667,76789..76932,77029..77226,77369..77559,77648..78150,78302..78551,78667..79038,79154..79325,79476..79597,79721..79904,80032..80174,80298..82556,82724..82826,82965..>82994))	Acanthamoeba castellanii str. Neff	14919897
ACA1_232830	mRNA	ACA1_232830	NW_004457518.1	83601	84345	R	ACA1_232830	complement(join(<83601..83672,83760..83915,84060..84122,84217..>84345))	Acanthamoeba castellanii str. Neff	14919898
ACA1_232840	mRNA	ACA1_232840	NW_004457518.1	84485	86566	R	ACA1_232840	complement(join(<84485..84682,84765..84998,85124..85278,85404..85599,85700..85817,85980..>86566))	Acanthamoeba castellanii str. Neff	14919899
ACA1_232850	mRNA	ACA1_232850	NW_004457518.1	86663	87087	D	ACA1_232850	join(<86663..86755,86899..>87087)	Acanthamoeba castellanii str. Neff	14919900
ACA1_232860	mRNA	ACA1_232860	NW_004457518.1	87090	89570	D	ACA1_232860	join(<87090..87244,87329..87360,87516..87626,87758..87864,87959..88446,88581..88652,88771..88851,88952..>89570)	Acanthamoeba castellanii str. Neff	14919901
ACA1_232870	mRNA	ACA1_232870	NW_004457518.1	89830	90983	D	ACA1_232870	join(<89830..89884,89951..90108,90258..90531,90635..90745,90865..>90983)	Acanthamoeba castellanii str. Neff	14919698
ACA1_232880	mRNA	ACA1_232880	NW_004457518.1	91211	97121	D	ACA1_232880	join(<91211..91474,91594..91648,91899..92034,92206..92371,92548..92684,92813..92916,93012..93094,93328..93501,93685..93894,93975..94416,94640..94788,94865..94943,95073..95341,95467..95515,96043..96089,96241..96274,96346..96473,96633..96747,96937..>97121)	Acanthamoeba castellanii str. Neff	14919699
ACA1_232990	mRNA	ACA1_232990	NW_004457518.1	97212	98146	D	ACA1_232990	join(<97212..97380,97456..97513,97602..97738,97829..97918,97977..>98146)	Acanthamoeba castellanii str. Neff	14919700
ACA1_233000	mRNA	ACA1_233000	NW_004457518.1	98234	99669	R	ACA1_233000	complement(join(<98234..98451,98600..98659,98764..98839,98939..98991,99133..99364,99460..>99669))	Acanthamoeba castellanii str. Neff	14919701
ACA1_233020	mRNA	ACA1_233020	NW_004457518.1	105681	107533	R	ACA1_233020	complement(join(<105681..105959,106079..106215,106344..106489,106635..107083,107261..>107533))	Acanthamoeba castellanii str. Neff	14919703
ACA1_233030	mRNA	ACA1_233030	NW_004457518.1	108369	109835	D	ACA1_233030	join(<108369..108525,108689..109148,109344..109488,109620..>109835)	Acanthamoeba castellanii str. Neff	14919704
ACA1_233040	mRNA	ACA1_233040	NW_004457518.1	110047	113395	R	ACA1_233040	complement(join(<110047..110159,110244..110395,110583..110736,110891..110968,111084..111255,111464..111610,111758..111859,112018..112167,112399..112459,112584..>113395))	Acanthamoeba castellanii str. Neff	14919705
ACA1_233050	mRNA	ACA1_233050	NW_004457518.1	113663	114685	D	ACA1_233050	join(<113663..113792,114093..>114685)	Acanthamoeba castellanii str. Neff	14919706
ACA1_233060	mRNA	ACA1_233060	NW_004457518.1	115774	118282	D	ACA1_233060	join(<115774..115940,116124..116222,116522..116619,116700..116839,116943..117072,117200..117258,117391..117474,117566..117660,117787..117946,118039..118109,118276..>118282)	Acanthamoeba castellanii str. Neff	14919707
ACA1_233070	mRNA	ACA1_233070	NW_004457518.1	118411	119836	D	ACA1_233070	join(<118411..118616,118696..118783,118909..118965,119065..119188,119256..119352,119522..119626,119761..>119836)	Acanthamoeba castellanii str. Neff	14919708
ACA1_233080	mRNA	ACA1_233080	NW_004457518.1	120104	124098	D	ACA1_233080	join(<120104..120289,120375..120519,120634..120960,121180..121217,121278..121566,121618..121710,121895..121966,122112..122206,122335..122545,122647..122695,122925..123035,123221..123424,123591..123870,123907..>124098)	Acanthamoeba castellanii str. Neff	14919709
ACA1_233090	mRNA	ACA1_233090	NW_004457518.1	124283	127284	D	ACA1_233090	join(<124283..124732,124831..124962,125065..125255,125400..125543,125630..125717,125834..125965,126109..126216,126334..126463,126512..126550,126564..126857,126929..>127284)	Acanthamoeba castellanii str. Neff	14919710
ACA1_233300	mRNA	ACA1_233300	NW_004457518.1	133207	134056	D	ACA1_233300	join(<133207..133452,133532..133633,133707..134032,134047..>134056)	Acanthamoeba castellanii str. Neff	14919711
ACA1_233410	mRNA	ACA1_233410	NW_004457518.1	135908	137073	D	ACA1_233410	join(<135908..135969,136044..136301,136401..136540,136623..136713,136806..136931,137025..>137073)	Acanthamoeba castellanii str. Neff	14919712
ACA1_233420	mRNA	ACA1_233420	NW_004457518.1	137196	138574	D	ACA1_233420	join(<137196..137341,137461..137601,137681..137790,137820..138193,138261..138350,138428..>138574)	Acanthamoeba castellanii str. Neff	14919713
ACA1_233430	mRNA	ACA1_233430	NW_004457518.1	138783	141514	R	ACA1_233430	complement(join(<138783..138822,138848..139131,139245..139324,139411..139566,139645..139719,139820..139903,139979..140050,140127..140273,140659..140742,140822..140893,140975..141084,141171..141324,141427..>141514))	Acanthamoeba castellanii str. Neff	14919714
ACA1_233440	mRNA	ACA1_233440	NW_004457518.1	142084	144036	R	ACA1_233440	complement(<142084..>144036)	Acanthamoeba castellanii str. Neff	14919715
ACA1_233450	mRNA	ACA1_233450	NW_004457518.1	144590	149641	D	ACA1_233450	join(<144590..147216,147334..>149641)	Acanthamoeba castellanii str. Neff	14919716
ACA1_233460	mRNA	ACA1_233460	NW_004457518.1	149697	150275	R	ACA1_233460	complement(<149697..>150275)	Acanthamoeba castellanii str. Neff	14919717
ACA1_233470	mRNA	ACA1_233470	NW_004457518.1	150536	152201	D	ACA1_233470	join(<150536..150590,150688..151193,151263..>152201)	Acanthamoeba castellanii str. Neff	14919718
ACA1_233480	mRNA	ACA1_233480	NW_004457518.1	152611	152943	D	ACA1_233480	<152611..>152943	Acanthamoeba castellanii str. Neff	14919719
ACA1_233590	mRNA	ACA1_233590	NW_004457518.1	154156	159912	D	ACA1_233590	join(<154156..154257,154400..154505,154595..154757,154842..154929,155029..155345,155416..155492,155606..155713,155778..155899,156062..157225,157332..157422,157489..157585,157697..157989,158085..158221,158590..>159912)	Acanthamoeba castellanii str. Neff	14919720
ACA1_233600	mRNA	ACA1_233600	NW_004457518.1	160086	162130	D	ACA1_233600	join(<160086..160444,160587..160656,160724..160829,160894..160959,161131..161308,161369..161706,161794..161927,161987..>162130)	Acanthamoeba castellanii str. Neff	14919721
ACA1_233610	mRNA	ACA1_233610	NW_004457518.1	162242	163796	D	ACA1_233610	join(<162242..162482,162561..162738,162816..163148,163252..163472,163603..>163796)	Acanthamoeba castellanii str. Neff	14919722
ACA1_233620	mRNA	ACA1_233620	NW_004457518.1	163904	165541	D	ACA1_233620	join(<163904..164091,164134..164323,164408..164572,164651..>165541)	Acanthamoeba castellanii str. Neff	14919723
ACA1_233630	mRNA	ACA1_233630	NW_004457518.1	165724	168007	D	ACA1_233630	join(<165724..167826,167897..>168007)	Acanthamoeba castellanii str. Neff	14919724
ACA1_233740	mRNA	ACA1_233740	NW_004457518.1	169623	169940	D	ACA1_233740	<169623..>169940	Acanthamoeba castellanii str. Neff	14919725
ACA1_233850	mRNA	ACA1_233850	NW_004457518.1	171361	171753	D	ACA1_233850	join(<171361..171540,171646..>171753)	Acanthamoeba castellanii str. Neff	14919726
ACA1_233860	mRNA	ACA1_233860	NW_004457518.1	171820	173384	R	ACA1_233860	complement(join(<171820..172158,172293..172536,172620..172846,172995..173144,173250..>173384))	Acanthamoeba castellanii str. Neff	14919727
ACA1_233870	mRNA	ACA1_233870	NW_004457518.1	173618	175036	R	ACA1_233870	complement(join(<173618..173852,173958..174121,174223..174325,174442..174537,174648..174794,174909..>175036))	Acanthamoeba castellanii str. Neff	14919728
ACA1_233880	mRNA	ACA1_233880	NW_004457518.1	175318	178240	D	ACA1_233880	join(<175318..175413,175547..175735,175821..175938,176019..176147,176236..176370,176487..176626,176729..176819,176909..177067,177222..177350,177457..177565,177718..177829,177878..177983,178062..>178240)	Acanthamoeba castellanii str. Neff	14919729
ACA1_233990	mRNA	ACA1_233990	NW_004457518.1	179785	180952	D	ACA1_233990	join(<179785..179937,180122..180261,180458..180560,180644..180742,180857..>180952)	Acanthamoeba castellanii str. Neff	14919730
ACA1_234000	mRNA	ACA1_234000	NW_004457518.1	181222	184293	D	ACA1_234000	join(<181222..181341,181434..181511,181601..181714,181805..181934,182060..182188,182277..182411,182512..182651,182778..182883,182974..183132,183273..183401,183525..183633,183733..183844,183939..184011,184115..>184293)	Acanthamoeba castellanii str. Neff	14919731
ACA1_234010	mRNA	ACA1_234010	NW_004457518.1	184818	185006	D	ACA1_234010	<184818..>185006	Acanthamoeba castellanii str. Neff	14919732
ACA1_234020	mRNA	ACA1_234020	NW_004457518.1	185341	186195	R	ACA1_234020	complement(<185341..>186195)	Acanthamoeba castellanii str. Neff	14919733
ACA1_234030	mRNA	ACA1_234030	NW_004457518.1	186511	186894	D	ACA1_234030	<186511..>186894	Acanthamoeba castellanii str. Neff	14919734
ACA1_234040	mRNA	ACA1_234040	NW_004457518.1	187626	188823	D	ACA1_234040	join(<187626..187958,188051..188134,188218..188330,188436..>188823)	Acanthamoeba castellanii str. Neff	14919735
ACA1_234050	mRNA	ACA1_234050	NW_004457518.1	188949	190821	D	ACA1_234050	join(<188949..188979,189075..189180,189285..189405,189509..189613,189906..190005,190078..190134,190252..190361,190472..190510,190603..>190821)	Acanthamoeba castellanii str. Neff	14919736
ACA1_234060	mRNA	ACA1_234060	NW_004457518.1	191050	192805	R	ACA1_234060	complement(join(<191050..191178,191267..191448,191551..191723,191790..191944,192042..192139,192267..192449,192589..>192805))	Acanthamoeba castellanii str. Neff	14919737
ACA1_234070	mRNA	ACA1_234070	NW_004457518.1	193160	194483	D	ACA1_234070	join(<193160..193198,193302..193401,193512..193585,193654..193754,193825..193906,194004..194063,194177..194251,194388..>194483)	Acanthamoeba castellanii str. Neff	14919738
ACA1_234080	mRNA	ACA1_234080	NW_004457518.1	194661	196924	D	ACA1_234080	join(<194661..194778,194900..195104,195189..195407,195500..195596,195696..195824,195906..195989,196131..196179,196274..196473,196550..196615,196685..>196924)	Acanthamoeba castellanii str. Neff	14919739
ACA1_234090	mRNA	ACA1_234090	NW_004457518.1	197022	197733	D	ACA1_234090	join(<197022..197158,197225..197337,197435..>197733)	Acanthamoeba castellanii str. Neff	14919740
ACA1_234100	mRNA	ACA1_234100	NW_004457518.1	198068	201428	D	ACA1_234100	join(<198068..198163,198315..198408,198552..198644,198763..199002,199091..199477,199619..199690,199762..199826,199960..200004,200092..200173,200247..200340,200465..200581,200670..200788,200890..>201428)	Acanthamoeba castellanii str. Neff	14919741
ACA1_234110	mRNA	ACA1_234110	NW_004457518.1	201799	203551	D	ACA1_234110	join(<201799..201928,202001..202121,202231..202306,202458..202607,202725..202845,202984..203060,203130..203365,203464..>203551)	Acanthamoeba castellanii str. Neff	14919742
ACA1_234120	mRNA	ACA1_234120	NW_004457518.1	203737	205324	R	ACA1_234120	complement(join(<203737..204596,204768..204950,205011..205143,205244..>205324))	Acanthamoeba castellanii str. Neff	14919743
ACA1_234130	mRNA	ACA1_234130	NW_004457518.1	205629	205987	D	ACA1_234130	join(<205629..205797,205971..>205987)	Acanthamoeba castellanii str. Neff	14919744
ACA1_234140	mRNA	ACA1_234140	NW_004457518.1	206145	207896	D	ACA1_234140	join(<206145..206257,206365..206429,206497..206549,206679..206774,206966..207022,207095..207209,207415..207547,207640..207719,207787..>207896)	Acanthamoeba castellanii str. Neff	14919745
ACA1_234150	mRNA	ACA1_234150	NW_004457518.1	208021	212119	D	ACA1_234150	join(<208021..208084,208097..208290,208465..208617,208696..208785,208917..209135,209323..209422,209531..209811,209907..210110,210208..210363,210508..210670,210795..211125,211212..211823,211936..>212119)	Acanthamoeba castellanii str. Neff	14919746
ACA1_234160	mRNA	ACA1_234160	NW_004457518.1	212447	213676	R	ACA1_234160	complement(join(<212447..212734,212837..213079,213149..213486,213634..>213676))	Acanthamoeba castellanii str. Neff	14919747
ACA1_234170	mRNA	ACA1_234170	NW_004457518.1	213999	216394	D	ACA1_234170	join(<213999..214031,214212..214544,214666..214791,215037..215207,215384..215470,215607..215666,215895..216027,216207..>216394)	Acanthamoeba castellanii str. Neff	14919748
ACA1_234180	mRNA	ACA1_234180	NW_004457518.1	217827	218540	D	ACA1_234180	<217827..>218540	Acanthamoeba castellanii str. Neff	14919749
ACA1_234190	mRNA	ACA1_234190	NW_004457518.1	222484	223017	D	ACA1_234190	join(<222484..222544,222599..222660,222961..>223017)	Acanthamoeba castellanii str. Neff	14919750
ACA1_234200	mRNA	ACA1_234200	NW_004457518.1	223473	224908	R	ACA1_234200	complement(join(<223473..223867,223987..224102,224469..>224908))	Acanthamoeba castellanii str. Neff	14919751
ACA1_234210	mRNA	ACA1_234210	NW_004457518.1	225144	225685	R	ACA1_234210	complement(join(<225144..225341,225572..>225685))	Acanthamoeba castellanii str. Neff	14919752
ACA1_234220	mRNA	ACA1_234220	NW_004457518.1	226013	231339	R	ACA1_234220	complement(join(<226013..226027,226068..226262,226420..226493,226610..226721,226848..227006,227108..228097,228292..228387,228492..228566,228749..228853,229019..229096,229178..229872,230014..230524,230772..230938,231043..231117,231288..>231339))	Acanthamoeba castellanii str. Neff	14919753
ACA1_234230	mRNA	ACA1_234230	NW_004457518.1	231574	234609	D	ACA1_234230	join(<231574..232076,232215..232283,232358..232567,232704..232776,233062..233189,233310..233495,233880..234054,234160..>234609)	Acanthamoeba castellanii str. Neff	14919754
ACA1_234240	mRNA	ACA1_234240	NW_004457518.1	237650	243498	D	ACA1_234240	join(<237650..237746,237822..238030,238185..238298,238483..238621,238818..238982,239102..239211,239349..239559,239628..239877,240042..240150,240278..240439,240512..240630,240645..240726,240854..241000,241069..241251,241316..241618,241802..242169,242393..242604,242725..242818,243006..>243498)	Acanthamoeba castellanii str. Neff	14919755
ACA1_234250	mRNA	ACA1_234250	NW_004457518.1	243635	253428	R	ACA1_234250	complement(join(<243635..243756,243989..244108,244383..244508,244664..244770,244950..245091,245256..245387,245499..245630,245862..245984,246283..246405,246498..246654,246799..246890,246990..247118,247305..247430,247576..247698,247905..247952,248082..248293,248455..248550,248629..248642,248673..248900,249097..249211,249299..249378,249493..249596,249751..250203,250332..250466,250555..250656,250826..250978,251126..251224,251399..251470,251646..251768,252003..252108,252204..252254,252402..252465,252567..252744,252900..253126,253304..>253428))	Acanthamoeba castellanii str. Neff	14919756
ACA1_234260	mRNA	ACA1_234260	NW_004457518.1	254519	255661	D	ACA1_234260	join(<254519..254566,254608..254794,254973..255198,255304..255364,255471..255563,255650..>255661)	Acanthamoeba castellanii str. Neff	14919757
ACA1_234270	mRNA	ACA1_234270	NW_004457518.1	255706	256488	D	ACA1_234270	join(<255706..255773,256137..>256488)	Acanthamoeba castellanii str. Neff	14919758
ACA1_234280	mRNA	ACA1_234280	NW_004457518.1	256752	259386	D	ACA1_234280	join(<256752..257434,257549..257657,257768..257872,257999..258164,258230..258350,258481..258521,258620..258701,258774..258917,258996..259084,259149..259183,259279..>259386)	Acanthamoeba castellanii str. Neff	14919759
ACA1_234290	mRNA	ACA1_234290	NW_004457518.1	261428	263364	R	ACA1_234290	complement(join(<261428..261484,261543..261655,261735..261812,261955..262109,262219..262354,262495..262627,262719..262833,262946..263047,263132..263219,263298..>263364))	Acanthamoeba castellanii str. Neff	14919760
ACA1_234300	mRNA	ACA1_234300	NW_004457518.1	263421	268645	R	ACA1_234300	complement(join(<263421..263615,263749..264195,264353..264434,264552..264897,265047..265161,265467..265578,265778..265865,265973..266091,266258..266380,266778..266864,266969..267098,267307..267412,267521..267615,267742..267838,267998..>268645))	Acanthamoeba castellanii str. Neff	14919761
ACA1_234310	mRNA	ACA1_234310	NW_004457518.1	268801	271850	R	ACA1_234310	complement(join(<268801..269210,269303..269591,269699..269956,270069..270559,270725..270887,270976..271181,271350..271693,271708..>271850))	Acanthamoeba castellanii str. Neff	14919762
ACA1_234320	mRNA	ACA1_234320	NW_004457518.1	272581	275633	R	ACA1_234320	complement(join(<272581..273869,274098..274247,274398..274562,274645..274983,275058..275187,275484..>275633))	Acanthamoeba castellanii str. Neff	14919763
ACA1_234330	mRNA	ACA1_234330	NW_004457518.1	275841	277168	R	ACA1_234330	complement(join(<275841..275972,276051..276148,276295..276323,276489..276562,276755..>277168))	Acanthamoeba castellanii str. Neff	14919764
ACA1_234340	mRNA	ACA1_234340	NW_004457518.1	277456	282895	D	ACA1_234340	join(<277456..277776,277950..278054,278208..278257,278495..278647,278760..279011,279177..279358,279540..279655,279833..279931,280064..280161,280267..280511,280705..281132,281329..281523,281630..281808,281974..>282895)	Acanthamoeba castellanii str. Neff	14919765
ACA1_234350	mRNA	ACA1_234350	NW_004457518.1	283062	289040	R	ACA1_234350	complement(join(<283062..283211,283287..283420,283552..283709,283793..284491,284619..284710,284889..285524,285547..285572,285777..286656,286755..>289040))	Acanthamoeba castellanii str. Neff	14919766
ACA1_234460	mRNA	ACA1_234460	NW_004457518.1	289322	290038	D	ACA1_234460	join(<289322..289388,289516..289735,289846..>290038)	Acanthamoeba castellanii str. Neff	14919768
ACA1_234470	mRNA	ACA1_234470	NW_004457518.1	290334	294818	R	ACA1_234470	complement(join(<290334..290990,291244..291338,291459..291608,291728..291811,292030..292202,292325..292398,292499..292682,292754..292981,293105..293265,293460..293545,293636..293706,293800..293934,294321..294410,294527..294600,294699..>294818))	Acanthamoeba castellanii str. Neff	14919769
ACA1_234580	mRNA	ACA1_234580	NW_004457518.1	295729	297368	R	ACA1_234580	complement(join(<295729..296462,296568..296786,296868..296998,297078..297101,297167..297216,297285..>297368))	Acanthamoeba castellanii str. Neff	14919770
ACA1_234590	mRNA	ACA1_234590	NW_004457518.1	298060	300418	D	ACA1_234590	join(<298060..298243,298359..298572,298710..299382,299499..299642,299741..299812,299918..300063,300170..300260,300341..>300418)	Acanthamoeba castellanii str. Neff	14919771
ACA1_234600	mRNA	ACA1_234600	NW_004457518.1	302432	303851	D	ACA1_234600	join(<302432..303040,303182..303433,303514..303604,303694..>303851)	Acanthamoeba castellanii str. Neff	14919772
ACA1_234610	mRNA	ACA1_234610	NW_004457518.1	304096	305152	R	ACA1_234610	complement(join(<304096..304233,304313..304362,304441..304569,304638..304780,304858..304894,304969..305014,305087..>305152))	Acanthamoeba castellanii str. Neff	14919773
ACA1_234620	mRNA	ACA1_234620	NW_004457518.1	305617	307462	D	ACA1_234620	join(<305617..306774,307232..>307462)	Acanthamoeba castellanii str. Neff	14919774
ACA1_234730	mRNA	ACA1_234730	NW_004457518.1	307819	308867	D	ACA1_234730	join(<307819..307941,308017..308350,308422..>308867)	Acanthamoeba castellanii str. Neff	14919775
ACA1_234740	mRNA	ACA1_234740	NW_004457518.1	309004	311079	R	ACA1_234740	complement(join(<309004..309081,309141..309377,309491..309682,309819..309953,310066..310185,310329..310496,310630..>311079))	Acanthamoeba castellanii str. Neff	14919776
ACA1_234750	mRNA	ACA1_234750	NW_004457518.1	311461	311910	R	ACA1_234750	complement(join(<311461..311631,311704..>311910))	Acanthamoeba castellanii str. Neff	14919777
ACA1_234760	mRNA	ACA1_234760	NW_004457518.1	311999	313741	R	ACA1_234760	complement(join(<311999..312537,312606..312704,312778..312828,312907..313098,313186..>313741))	Acanthamoeba castellanii str. Neff	14919778
ACA1_234770	mRNA	ACA1_234770	NW_004457518.1	313964	315204	R	ACA1_234770	complement(join(<313964..314388,314454..314544,314626..314697,314765..314972,315059..>315204))	Acanthamoeba castellanii str. Neff	14919779
ACA1_234780	mRNA	ACA1_234780	NW_004457518.1	315704	316835	R	ACA1_234780	complement(join(<315704..315778,315883..316042,316128..316227,316340..316568,316716..>316835))	Acanthamoeba castellanii str. Neff	14919780
ACA1_234790	mRNA	ACA1_234790	NW_004457518.1	317166	319874	R	ACA1_234790	complement(join(<317166..317398,317492..318347,318459..318697,318795..318905,319025..319197,319313..319568,319757..>319874))	Acanthamoeba castellanii str. Neff	14919781
ACA1_234800	mRNA	ACA1_234800	NW_004457518.1	319943	321704	R	ACA1_234800	complement(join(<319943..320050,320171..320310,320402..>321704))	Acanthamoeba castellanii str. Neff	14919782
ACA1_234810	mRNA	ACA1_234810	NW_004457518.1	321916	322417	R	ACA1_234810	complement(join(<321916..322033,322131..322231,322367..>322417))	Acanthamoeba castellanii str. Neff	14919783
ACA1_234820	mRNA	ACA1_234820	NW_004457518.1	322784	325015	R	ACA1_234820	complement(join(<322784..322846,322949..323181,323279..323438,323513..323620,323701..323809,323893..324096,324209..324314,324435..324585,324705..324776,324862..324941,325009..>325015))	Acanthamoeba castellanii str. Neff	14919784
ACA1_234930	mRNA	ACA1_234930	NW_004457518.1	325345	325667	D	ACA1_234930	join(<325345..325410,325509..>325667)	Acanthamoeba castellanii str. Neff	14919785
ACA1_235040	mRNA	ACA1_235040	NW_004457518.1	326463	327384	R	ACA1_235040	complement(join(<326463..326642,326756..326874,327028..327141,327234..>327384))	Acanthamoeba castellanii str. Neff	14919786
ACA1_235050	mRNA	ACA1_235050	NW_004457518.1	327808	329651	D	ACA1_235050	join(<327808..327865,327958..328035,328181..328288,328412..328522,328621..328858,328952..>329651)	Acanthamoeba castellanii str. Neff	14919787
ACA1_235060	mRNA	ACA1_235060	NW_004457518.1	329691	330471	R	ACA1_235060	complement(join(<329691..329873,329972..330291,330396..>330471))	Acanthamoeba castellanii str. Neff	14919788
ACA1_235070	mRNA	ACA1_235070	NW_004457518.1	330723	332651	R	ACA1_235070	complement(join(<330723..331201,331321..331603,331692..331932,332018..332160,332511..>332651))	Acanthamoeba castellanii str. Neff	14919789
ACA1_235080	mRNA	ACA1_235080	NW_004457518.1	333405	334544	R	ACA1_235080	complement(<333405..>334544)	Acanthamoeba castellanii str. Neff	14919790
ACA1_235090	mRNA	ACA1_235090	NW_004457518.1	335372	336782	R	ACA1_235090	complement(join(<335372..335653,335759..335832,335930..336006,336101..336155,336166..336232,336343..336425,336518..336627,336697..>336782))	Acanthamoeba castellanii str. Neff	14919791
ACA1_235200	mRNA	ACA1_235200	NW_004457518.1	338619	340230	R	ACA1_235200	complement(join(<338619..338667,338871..339042,339119..339258,339343..339458,339539..339696,339766..339840,340038..>340230))	Acanthamoeba castellanii str. Neff	14919792
ACA1_235410	mRNA	ACA1_235410	NW_004457518.1	340595	344147	D	ACA1_235410	join(<340595..340712,340883..341013,341162..341265,341361..341519,341688..341864,341992..342140,342309..342490,342570..342656,342727..342837,342864..342939,343067..343230,343331..343406,343490..343720,343842..343992,344129..>344147)	Acanthamoeba castellanii str. Neff	14919793
ACA1_235420	mRNA	ACA1_235420	NW_004457518.1	344577	345292	D	ACA1_235420	join(<344577..345028,345096..345269,345280..>345292)	Acanthamoeba castellanii str. Neff	14919794
ACA1_235530	mRNA	ACA1_235530	NW_004457518.1	347493	349092	R	ACA1_235530	complement(join(<347493..347656,347796..347957,348074..348317,348388..348543,348683..348828,348923..348956,349015..>349092))	Acanthamoeba castellanii str. Neff	14919795
ACA1_235540	mRNA	ACA1_235540	NW_004457518.1	349213	349739	R	ACA1_235540	complement(join(<349213..349395,349477..349599,349674..>349739))	Acanthamoeba castellanii str. Neff	14919796
ACA1_235650	mRNA	ACA1_235650	NW_004457518.1	350264	350530	D	ACA1_235650	<350264..>350530	Acanthamoeba castellanii str. Neff	14919797
ACA1_235660	mRNA	ACA1_235660	NW_004457518.1	350738	351383	D	ACA1_235660	join(<350738..350836,350985..351136,351215..>351383)	Acanthamoeba castellanii str. Neff	14919798
ACA1_235670	mRNA	ACA1_235670	NW_004457518.1	351389	352071	R	ACA1_235670	complement(join(<351389..351550,351615..351708,351842..>352071))	Acanthamoeba castellanii str. Neff	14919799
ACA1_235680	mRNA	ACA1_235680	NW_004457518.1	353004	355992	R	ACA1_235680	complement(join(<353004..353131,353427..353543,353639..353800,353898..353996,354110..354189,354318..354478,354561..354685,354799..354940,355020..355224,355298..355383,355458..355643,355683..355805,355942..>355992))	Acanthamoeba castellanii str. Neff	14919800
ACA1_235690	mRNA	ACA1_235690	NW_004457518.1	357028	358569	R	ACA1_235690	complement(join(<357028..357305,357541..357721,357796..358062,358154..358445,358481..>358569))	Acanthamoeba castellanii str. Neff	14919801
ACA1_235700	mRNA	ACA1_235700	NW_004457518.1	359180	360363	R	ACA1_235700	complement(join(<359180..359324,359469..359572,359697..359805,359978..360113,360189..>360363))	Acanthamoeba castellanii str. Neff	14919802
ACA1_235710	mRNA	ACA1_235710	NW_004457518.1	360772	361787	D	ACA1_235710	join(<360772..360795,360895..361693,361711..>361787)	Acanthamoeba castellanii str. Neff	14919803
ACA1_235720	mRNA	ACA1_235720	NW_004457518.1	361984	362702	D	ACA1_235720	join(<361984..362242,362335..362448,362527..>362702)	Acanthamoeba castellanii str. Neff	14919804
ACA1_235730	mRNA	ACA1_235730	NW_004457518.1	363312	366497	D	ACA1_235730	join(<363312..363606,363708..363940,364050..364114,364218..364488,364578..364970,365067..>366497)	Acanthamoeba castellanii str. Neff	14919805
ACA1_235740	mRNA	ACA1_235740	NW_004457518.1	367216	368592	R	ACA1_235740	complement(join(<367216..367321,367343..367391,367469..367549,367627..367788,367870..367923,367989..>368592))	Acanthamoeba castellanii str. Neff	14919806
ACA1_235750	mRNA	ACA1_235750	NW_004457518.1	368922	369718	D	ACA1_235750	join(<368922..369096,369217..369271,369398..369449,369566..>369718)	Acanthamoeba castellanii str. Neff	14919807
ACA1_235760	mRNA	ACA1_235760	NW_004457518.1	369951	373107	D	ACA1_235760	join(<369951..372665,372781..>373107)	Acanthamoeba castellanii str. Neff	14919808
ACA1_235770	mRNA	ACA1_235770	NW_004457518.1	373168	374728	R	ACA1_235770	complement(join(<373168..374140,374207..374658,374720..>374728))	Acanthamoeba castellanii str. Neff	14919809
ACA1_235780	mRNA	ACA1_235780	NW_004457518.1	375286	376630	D	ACA1_235780	join(<375286..375672,375807..375894,375980..376053,376127..>376630)	Acanthamoeba castellanii str. Neff	14919810
ACA1_235890	mRNA	ACA1_235890	NW_004457518.1	378429	380667	D	ACA1_235890	join(<378429..378818,378966..379053,379139..379241,379359..379526,379615..380267,380366..>380667)	Acanthamoeba castellanii str. Neff	14919811
ACA1_235900	mRNA	ACA1_235900	NW_004457518.1	380865	381240	D	ACA1_235900	join(<380865..380981,381106..>381240)	Acanthamoeba castellanii str. Neff	14919812
ACA1_235910	mRNA	ACA1_235910	NW_004457518.1	381587	384064	R	ACA1_235910	complement(join(<381587..381613,381683..382257,382326..382565,382854..382984,383050..383138,383229..383326,383400..383609,383681..383815,383899..>384064))	Acanthamoeba castellanii str. Neff	14919813
ACA1_235920	mRNA	ACA1_235920	NW_004457518.1	384716	386209	R	ACA1_235920	complement(join(<384716..385063,385149..385357,385436..385520,385600..385729,385818..385913,386015..386121,386201..>386209))	Acanthamoeba castellanii str. Neff	14919814
ACA1_235930	mRNA	ACA1_235930	NW_004457518.1	386580	387756	R	ACA1_235930	complement(join(<386580..386821,386892..387084,387157..>387756))	Acanthamoeba castellanii str. Neff	14919815
ACA1_235940	mRNA	ACA1_235940	NW_004457518.1	387848	389296	D	ACA1_235940	join(<387848..388630,388788..388892,389006..389087,389205..>389296)	Acanthamoeba castellanii str. Neff	14919816
ACA1_236050	mRNA	ACA1_236050	NW_004457518.1	389589	390596	D	ACA1_236050	join(<389589..389789,390088..390192,390306..390387,390505..>390596)	Acanthamoeba castellanii str. Neff	14919817
ACA1_236060	mRNA	ACA1_236060	NW_004457518.1	390800	394643	D	ACA1_236060	join(<390800..390991,391069..391537,391612..391665,391813..392014,392083..392164,392228..392452,392526..392730,392817..392957,393025..393229,393291..393597,393628..393798,393859..393896,393907..394002,394074..394339,394420..>394643)	Acanthamoeba castellanii str. Neff	14919818
ACA1_236070	mRNA	ACA1_236070	NW_004457518.1	394707	398455	D	ACA1_236070	join(<394707..394833,394922..395285,395390..395470,395538..395770,395838..395967,396070..396272,396407..396453,396523..396792,396884..397048,397159..397331,397400..397675,397779..397918,398006..398131,398223..>398455)	Acanthamoeba castellanii str. Neff	14919819
ACA1_236080	mRNA	ACA1_236080	NW_004457518.1	399547	400523	R	ACA1_236080	complement(join(<399547..399638,399713..400043,400152..>400523))	Acanthamoeba castellanii str. Neff	14919820
ACA1_236090	mRNA	ACA1_236090	NW_004457518.1	402113	404110	R	ACA1_236090	complement(join(<402113..402247,402315..402368,402451..402523,402614..402798,402922..403194,403326..403415,403503..403807,403960..>404110))	Acanthamoeba castellanii str. Neff	14919821
ACA1_236100	mRNA	ACA1_236100	NW_004457518.1	404298	405718	R	ACA1_236100	complement(join(<404298..404422,404520..404570,404639..405194,405369..405488,405572..>405718))	Acanthamoeba castellanii str. Neff	14919822
ACA1_236110	mRNA	ACA1_236110	NW_004457518.1	405938	408864	R	ACA1_236110	complement(join(<405938..406081,406195..406447,406543..406745,406832..406948,406999..407408,407486..407563,407637..407774,407860..408205,408277..408617,408729..>408864))	Acanthamoeba castellanii str. Neff	14919823
ACA1_236120	mRNA	ACA1_236120	NW_004457518.1	409545	410284	D	ACA1_236120	join(<409545..409646,409716..409767,409835..409896,409979..>410284)	Acanthamoeba castellanii str. Neff	14919824
ACA1_236130	mRNA	ACA1_236130	NW_004457518.1	410518	412331	D	ACA1_236130	join(<410518..410601,410711..410808,411067..411185,411281..411309,411404..411490,411619..411714,411768..411969,412059..412143,412250..>412331)	Acanthamoeba castellanii str. Neff	14919825
ACA1_236140	mRNA	ACA1_236140	NW_004457518.1	412622	413758	R	ACA1_236140	complement(join(<412622..413185,413267..413541,413647..>413758))	Acanthamoeba castellanii str. Neff	14919826
ACA1_236150	mRNA	ACA1_236150	NW_004457518.1	414435	419974	R	ACA1_236150	complement(join(<414435..415327,415420..415567,415705..416024,416109..416236,416322..417420,417493..418011,418112..418217,418330..418419,418447..418505,418572..418665,418759..419001,419117..419356,419474..419563,419747..>419974))	Acanthamoeba castellanii str. Neff	14919827
ACA1_236160	mRNA	ACA1_236160	NW_004457518.1	420230	422905	R	ACA1_236160	complement(join(<420230..420484,420562..420657,420735..420826,420900..421026,421111..421186,421250..421413,421497..421565,421632..421724,421794..421954,422031..422126,422198..422418,422488..422563,422638..422823,422884..>422905))	Acanthamoeba castellanii str. Neff	14919828
ACA1_236170	mRNA	ACA1_236170	NW_004457518.1	423209	424435	R	ACA1_236170	complement(join(<423209..423327,423412..423528,423626..423650,423802..423909,423999..424150,424215..424268,424333..>424435))	Acanthamoeba castellanii str. Neff	14919829
ACA1_236180	mRNA	ACA1_236180	NW_004457518.1	425064	427684	R	ACA1_236180	complement(join(<425064..425683,425778..426315,426425..426455,426475..426748,426845..427310,427634..>427684))	Acanthamoeba castellanii str. Neff	14919830
ACA1_236290	mRNA	ACA1_236290	NW_004457518.1	428107	429679	D	ACA1_236290	join(<428107..428184,428481..428609,428688..428780,428901..428974,429062..429170,429234..429339,429422..429515,429577..>429679)	Acanthamoeba castellanii str. Neff	14919831
ACA1_236300	mRNA	ACA1_236300	NW_004457518.1	429903	430576	D	ACA1_236300	join(<429903..429954,430044..430144,430247..>430576)	Acanthamoeba castellanii str. Neff	14919832
ACA1_236310	mRNA	ACA1_236310	NW_004457518.1	431195	437226	D	ACA1_236310	join(<431195..431375,431476..431604,431685..431751,431859..431965,432054..432180,432296..432437,432544..432575,432626..432632,432650..432721,432808..432936,433030..433106,433180..433301,433383..433454,433524..433678,433811..433921,433998..434061,434139..434210,434304..434393,434467..434540,434619..434733,434827..434955,435064..435181,435264..435328,435460..435633,435729..435803,435862..435941,436018..436276,436354..436425,436507..436664,436753..437023,437093..>437226)	Acanthamoeba castellanii str. Neff	14919833
ACA1_236320	mRNA	ACA1_236320	NW_004457518.1	437502	439922	D	ACA1_236320	join(<437502..437574,437701..437812,437982..438056,438162..438243,438317..438469,438580..438746,438899..439077,439164..439544,439660..439786,439871..>439922)	Acanthamoeba castellanii str. Neff	14919834
ACA1_236330	mRNA	ACA1_236330	NW_004457518.1	440149	441150	D	ACA1_236330	join(<440149..440790,440863..>441150)	Acanthamoeba castellanii str. Neff	14919835
ACA1_236340	mRNA	ACA1_236340	NW_004457518.1	441241	442213	R	ACA1_236340	complement(join(<441241..441290,441374..441442,441555..441699,441809..441923,442032..>442213))	Acanthamoeba castellanii str. Neff	14919836
ACA1_236350	mRNA	ACA1_236350	NW_004457518.1	442365	444110	D	ACA1_236350	join(<442365..442541,442788..442899,442979..443098,443205..443297,443381..443560,443674..443821,443930..>444110)	Acanthamoeba castellanii str. Neff	14919837
ACA1_236360	mRNA	ACA1_236360	NW_004457518.1	444322	445238	R	ACA1_236360	complement(join(<444322..444489,444618..444748,444851..445079,445173..>445238))	Acanthamoeba castellanii str. Neff	14919838
ACA1_236470	mRNA	ACA1_236470	NW_004457518.1	451247	451818	R	ACA1_236470	complement(join(<451247..451615,451783..>451818))	Acanthamoeba castellanii str. Neff	14919839
ACA1_236480	mRNA	ACA1_236480	NW_004457518.1	453025	453588	R	ACA1_236480	complement(join(<453025..453463,453563..>453588))	Acanthamoeba castellanii str. Neff	14919840
ACA1_236490	mRNA	ACA1_236490	NW_004457518.1	453905	454474	D	ACA1_236490	<453905..>454474	Acanthamoeba castellanii str. Neff	14919841
ACA1_236500	mRNA	ACA1_236500	NW_004457518.1	454684	456241	R	ACA1_236500	complement(join(<454684..455055,455144..455257,455341..455487,455557..455903,456133..>456241))	Acanthamoeba castellanii str. Neff	14919842
ACA1_236510	mRNA	ACA1_236510	NW_004457518.1	456485	459637	D	ACA1_236510	join(<456485..456516,456727..457024,457127..457255,457364..457555,457665..457766,457860..457994,458089..458226,458339..458836,458919..458997,459092..459151,459236..459424,459498..>459637)	Acanthamoeba castellanii str. Neff	14919843
ACA1_236520	mRNA	ACA1_236520	NW_004457518.1	460465	460848	R	ACA1_236520	complement(join(<460465..460525,460617..460734,460803..>460848))	Acanthamoeba castellanii str. Neff	14919844
ACA1_236630	mRNA	ACA1_236630	NW_004457518.1	462844	465279	R	ACA1_236630	complement(join(<462844..462944,463029..463130,463223..463307,463396..463524,463614..463705,463787..464018,464126..464249,464351..464466,464557..464582,464762..464809,465045..>465279))	Acanthamoeba castellanii str. Neff	14919845
ACA1_236640	mRNA	ACA1_236640	NW_004457518.1	465550	465986	D	ACA1_236640	join(<465550..465574,465802..>465986)	Acanthamoeba castellanii str. Neff	14919846
ACA1_236650	mRNA	ACA1_236650	NW_004457518.1	466303	469355	D	ACA1_236650	join(<466303..466578,466804..467092,467161..467300,467416..468216,468303..468489,468761..469038,469125..>469355)	Acanthamoeba castellanii str. Neff	14919847
ACA1_236660	mRNA	ACA1_236660	NW_004457518.1	469507	471198	R	ACA1_236660	complement(join(<469507..469789,469876..469955,470035..470115,470271..470425,470489..470635,470719..470875,470976..471093,471164..>471198))	Acanthamoeba castellanii str. Neff	14919848
ACA1_236670	mRNA	ACA1_236670	NW_004457518.1	471467	471997	D	ACA1_236670	join(<471467..471583,471710..>471997)	Acanthamoeba castellanii str. Neff	14919849
ACA1_236680	mRNA	ACA1_236680	NW_004457518.1	472339	473101	D	ACA1_236680	join(<472339..472553,472640..472824,472908..>473101)	Acanthamoeba castellanii str. Neff	14919850
ACA1_236690	mRNA	ACA1_236690	NW_004457518.1	473221	474211	D	ACA1_236690	join(<473221..473328,473518..473572,473646..473755,473832..473904,473994..>474211)	Acanthamoeba castellanii str. Neff	14919851
ACA1_236700	mRNA	ACA1_236700	NW_004457518.1	474909	477252	R	ACA1_236700	complement(join(<474909..475026,475057..475170,475259..>477252))	Acanthamoeba castellanii str. Neff	14919852
ACA1_236710	mRNA	ACA1_236710	NW_004457518.1	475409	476823	D	ACA1_236710	<475409..>476823	Acanthamoeba castellanii str. Neff	14919854
ACA1_236820	mRNA	ACA1_236820	NW_004457518.1	477531	478336	D	ACA1_236820	join(<477531..477990,478116..>478336)	Acanthamoeba castellanii str. Neff	14919853
ACA1_236930	mRNA	ACA1_236930	NW_004457518.1	484924	485289	D	ACA1_236930	<484924..>485289	Acanthamoeba castellanii str. Neff	14919855
ACA1_236940	mRNA	ACA1_236940	NW_004457518.1	485708	486744	R	ACA1_236940	complement(join(<485708..485814,485892..486009,486116..486169,486263..486328,486436..486531,486646..>486744))	Acanthamoeba castellanii str. Neff	14919856
ACA1_237050	mRNA	ACA1_237050	NW_004457518.1	492164	494452	D	ACA1_237050	join(<492164..492192,492218..492467,492641..492704,492785..492909,493058..493090,493223..493343,493433..493564,493649..493719,493796..493912,493986..494159,494222..>494452)	Acanthamoeba castellanii str. Neff	14919857
ACA1_237160	mRNA	ACA1_237160	NW_004457518.1	495260	497932	R	ACA1_237160	complement(join(<495260..495426,495505..495666,495771..495846,495956..496068,496165..496234,496380..496550,496768..496971,497065..497235,497403..497506,497585..497846,497909..>497932))	Acanthamoeba castellanii str. Neff	14919858
ACA1_237270	mRNA	ACA1_237270	NW_004457518.1	500118	500861	D	ACA1_237270	join(<500118..500186,500282..500332,500413..500533,500610..500666,500740..>500861)	Acanthamoeba castellanii str. Neff	14919859
ACA1_237280	mRNA	ACA1_237280	NW_004457518.1	500909	502429	R	ACA1_237280	complement(join(<500909..501206,501291..501381,501455..501482,501560..501695,501928..502040,502123..502176,502245..502320,502386..>502429))	Acanthamoeba castellanii str. Neff	14919860
ACA1_237290	mRNA	ACA1_237290	NW_004457518.1	502616	503747	R	ACA1_237290	complement(join(<502616..502765,502886..503035,503272..503287,503358..503415,503477..>503747))	Acanthamoeba castellanii str. Neff	14919861
ACA1_237410	mRNA	ACA1_237410	NW_004457518.1	504472	504874	R	ACA1_237410	complement(join(<504472..504588,504669..504722,504791..>504874))	Acanthamoeba castellanii str. Neff	14919863
ACA1_237430	mRNA	ACA1_237430	NW_004457518.1	509265	510016	D	ACA1_237430	join(<509265..509404,509490..509607,509692..509756,509832..509865,509939..>510016)	Acanthamoeba castellanii str. Neff	14919865
ACA1_237440	mRNA	ACA1_237440	NW_004457518.1	510084	511189	R	ACA1_237440	complement(join(<510084..510159,510231..510345,510423..510548,510623..510767,510878..511003,511058..>511189))	Acanthamoeba castellanii str. Neff	14919866
ACA1_237550	mRNA	ACA1_237550	NW_004457518.1	515718	516296	D	ACA1_237550	<515718..>516296	Acanthamoeba castellanii str. Neff	14919867
ACA1_237560	mRNA	ACA1_237560	NW_004457518.1	516482	517563	D	ACA1_237560	join(<516482..516796,516912..516983,517070..517181,517347..517420,517498..>517563)	Acanthamoeba castellanii str. Neff	14919868
ACA1_036870	mRNA	ACA1_036870	NW_004457516.1	3862	4151	R	ACA1_036870	complement(<3862..>4151)	Acanthamoeba castellanii str. Neff	14919666
ACA1_036880	mRNA	ACA1_036880	NW_004457516.1	4438	5835	R	ACA1_036880	complement(join(<4438..4611,4691..4918,4996..5195,5285..5608,5682..>5835))	Acanthamoeba castellanii str. Neff	14919697
ACA1_036890	mRNA	ACA1_036890	NW_004457516.1	6184	7411	D	ACA1_036890	join(<6184..6275,6341..6413,6499..6541,6604..6668,6808..6844,6933..7021,7112..7210,7286..>7411)	Acanthamoeba castellanii str. Neff	14919685
ACA1_036900	mRNA	ACA1_036900	NW_004457516.1	7838	9665	D	ACA1_036900	join(<7838..8314,8438..8771,8848..9410,9498..>9665)	Acanthamoeba castellanii str. Neff	14919686
ACA1_036910	mRNA	ACA1_036910	NW_004457516.1	9986	11085	D	ACA1_036910	join(<9986..10170,10302..10767,10960..>11085)	Acanthamoeba castellanii str. Neff	14919687
ACA1_036920	mRNA	ACA1_036920	NW_004457516.1	11772	14497	R	ACA1_036920	complement(join(<11772..11930,12015..12126,12243..12370,12470..12568,12661..12732,12841..13035,13104..13212,13347..13710,13831..>14497))	Acanthamoeba castellanii str. Neff	14919688
ACA1_036930	mRNA	ACA1_036930	NW_004457516.1	15202	16726	R	ACA1_036930	complement(join(<15202..15438,15521..15628,15717..15831,15902..15962,16063..16187,16273..16415,16490..>16726))	Acanthamoeba castellanii str. Neff	14919689
ACA1_036940	mRNA	ACA1_036940	NW_004457516.1	17120	19080	D	ACA1_036940	join(<17120..18234,18357..>19080)	Acanthamoeba castellanii str. Neff	14919690
ACA1_036950	mRNA	ACA1_036950	NW_004457516.1	19318	21279	D	ACA1_036950	join(<19318..19449,19522..>21279)	Acanthamoeba castellanii str. Neff	14919691
ACA1_036960	mRNA	ACA1_036960	NW_004457516.1	21482	28063	D	ACA1_036960	join(<21482..21640,21708..21833,21940..22095,22183..22285,22386..22476,22539..22628,22743..22854,22962..23101,23192..23289,23384..23562,23638..23839,23933..24061,24212..24315,24410..24566,24653..24765,24881..25045,25169..25346,25444..25602,25697..25796,25936..26142,26234..26403,26546..26715,26819..26907,26991..27178,27254..27514,27653..27825,27953..>28063)	Acanthamoeba castellanii str. Neff	14919692
ACA1_036970	mRNA	ACA1_036970	NW_004457516.1	28181	28556	R	ACA1_036970	complement(join(<28181..28257,28343..>28556))	Acanthamoeba castellanii str. Neff	14919693
ACA1_036980	mRNA	ACA1_036980	NW_004457516.1	28767	30107	R	ACA1_036980	complement(join(<28767..28803,28814..29025,29100..29250,29314..29438,29529..29560,29645..29701,29774..>30107))	Acanthamoeba castellanii str. Neff	14919694
ACA1_036990	mRNA	ACA1_036990	NW_004457516.1	30351	33036	R	ACA1_036990	complement(join(<30351..30409,30510..30551,30628..30729,30812..30895,30973..31024,31117..31220,31315..31376,31462..31523,31628..31796,31910..32150,32244..32289,32382..32414,32509..32608,32691..32758,32824..>33036))	Acanthamoeba castellanii str. Neff	14919695
ACA1_037000	mRNA	ACA1_037000	NW_004457516.1	33212	33406	D	ACA1_037000	<33212..>33406	Acanthamoeba castellanii str. Neff	14919696
ACA1_037010	mRNA	ACA1_037010	NW_004457516.1	33660	34675	R	ACA1_037010	complement(join(<33660..34495,34576..>34675))	Acanthamoeba castellanii str. Neff	14919667
ACA1_037020	mRNA	ACA1_037020	NW_004457516.1	34745	36526	R	ACA1_037020	complement(join(<34745..35125,35206..35420,35487..35607,35714..35974,36113..>36526))	Acanthamoeba castellanii str. Neff	14919668
ACA1_037030	mRNA	ACA1_037030	NW_004457516.1	37195	38418	R	ACA1_037030	complement(join(<37195..37320,37392..37541,37634..37736,37820..37981,37994..38174,38246..38320,38388..>38418))	Acanthamoeba castellanii str. Neff	14919669
ACA1_037040	mRNA	ACA1_037040	NW_004457516.1	38844	39082	R	ACA1_037040	complement(join(<38844..38954,39017..>39082))	Acanthamoeba castellanii str. Neff	14919670
ACA1_037050	mRNA	ACA1_037050	NW_004457516.1	39616	40473	R	ACA1_037050	complement(<39616..>40473)	Acanthamoeba castellanii str. Neff	14919671
ACA1_037060	mRNA	ACA1_037060	NW_004457516.1	41157	46747	D	ACA1_037060	join(<41157..41290,41380..41764,41846..41893,41918..41944,42040..42494,42517..43780,43798..43983,44018..45281,45353..45468,45538..46109,46172..46507,46609..>46747)	Acanthamoeba castellanii str. Neff	14919672
ACA1_037070	mRNA	ACA1_037070	NW_004457516.1	46842	47967	R	ACA1_037070	complement(join(<46842..47027,47122..47264,47389..47522,47627..47724,47794..>47967))	Acanthamoeba castellanii str. Neff	14919673
ACA1_037080	mRNA	ACA1_037080	NW_004457516.1	48330	50429	D	ACA1_037080	<48330..>50429	Acanthamoeba castellanii str. Neff	14919674
ACA1_037090	mRNA	ACA1_037090	NW_004457516.1	50966	56959	D	ACA1_037090	join(<50966..51485,51598..51719,51806..51871,51954..52104,52190..52259,52356..52518,52607..52754,52823..52940,53045..53103,53213..53412,53530..53605,53706..53807,53882..54092,54265..54401,54469..54900,54986..55155,55252..55401,55521..55587,55731..55834,55915..56152,56236..56430,56501..56654,56719..>56959)	Acanthamoeba castellanii str. Neff	14919675
ACA1_037100	mRNA	ACA1_037100	NW_004457516.1	57074	58631	R	ACA1_037100	complement(join(<57074..57246,57348..57521,57603..57674,57761..57824,57900..58154,58260..>58631))	Acanthamoeba castellanii str. Neff	14919676
ACA1_037110	mRNA	ACA1_037110	NW_004457516.1	58861	63373	R	ACA1_037110	complement(join(<58861..59011,59107..59260,59347..59564,59656..59975,60043..60280,60347..60674,60755..60842,61218..61441,61519..61702,61795..61908,62245..62361,62652..62727,62800..62909,63017..63183,63271..>63373))	Acanthamoeba castellanii str. Neff	14919677
ACA1_037120	mRNA	ACA1_037120	NW_004457516.1	63607	64623	D	ACA1_037120	join(<63607..63751,63843..63918,64006..64087,64165..64263,64362..64431,64499..>64623)	Acanthamoeba castellanii str. Neff	14919678
ACA1_037130	mRNA	ACA1_037130	NW_004457516.1	64712	66037	R	ACA1_037130	complement(<64712..>66037)	Acanthamoeba castellanii str. Neff	14919679
ACA1_037140	mRNA	ACA1_037140	NW_004457516.1	66140	67480	D	ACA1_037140	join(<66140..66283,66296..>67480)	Acanthamoeba castellanii str. Neff	14919680
ACA1_037150	mRNA	ACA1_037150	NW_004457516.1	67655	68630	D	ACA1_037150	join(<67655..67912,68025..68306,68383..68462,68546..>68630)	Acanthamoeba castellanii str. Neff	14919681
ACA1_037160	mRNA	ACA1_037160	NW_004457516.1	68716	72841	R	ACA1_037160	complement(join(<68716..68867,68986..69145,69232..69333,69446..69535,69638..69766,69849..69965,70058..70183,70283..70384,70491..70631,70725..70827,70906..70969,71054..71129,71226..71380,71469..71658,71718..71812,71877..72262,72417..72549,72694..>72841))	Acanthamoeba castellanii str. Neff	14919682
ACA1_037170	mRNA	ACA1_037170	NW_004457516.1	73210	78162	D	ACA1_037170	join(<73210..73336,73358..73518,73595..73666,73733..73822,73917..73948,74073..74433,74695..74805,74874..74892,74956..75112,75195..75295,75391..75506,75586..75683,75775..75839,75915..76057,76184..76255,76332..76360,76448..76589,76667..76708,76783..76932,76998..77128,77196..77265,77358..77864,77920..>78162)	Acanthamoeba castellanii str. Neff	14919683
ACA1_037180	mRNA	ACA1_037180	NW_004457516.1	78230	78765	R	ACA1_037180	complement(join(<78230..78528,78618..>78765))	Acanthamoeba castellanii str. Neff	14919684
ACA1_037190	mRNA	ACA1_037190	NW_004457516.1	78897	80952	D	ACA1_037190	join(<78897..79051,79141..79244,79302..79401,79665..79804,79880..79992,80101..80442,80530..80647,80759..>80952)	Acanthamoeba castellanii str. Neff	14919654
ACA1_037200	mRNA	ACA1_037200	NW_004457516.1	81045	81555	D	ACA1_037200	join(<81045..81185,81328..>81555)	Acanthamoeba castellanii str. Neff	14919655
ACA1_037210	mRNA	ACA1_037210	NW_004457516.1	81653	84102	R	ACA1_037210	complement(join(<81653..81862,81934..82549,82842..82972,83061..83201,83414..83581,83698..83806,83981..>84102))	Acanthamoeba castellanii str. Neff	14919656
ACA1_037220	mRNA	ACA1_037220	NW_004457516.1	84348	86075	R	ACA1_037220	complement(join(<84348..84473,84558..84691,84782..84882,84987..85054,85123..85221,85678..85785,85807..85899,85986..>86075))	Acanthamoeba castellanii str. Neff	14919657
ACA1_037430	mRNA	ACA1_037430	NW_004457516.1	86956	88670	R	ACA1_037430	complement(join(<86956..87143,87235..87670,87762..87890,88015..88140,88242..88322,88391..88423,88578..>88670))	Acanthamoeba castellanii str. Neff	14919658
ACA1_037440	mRNA	ACA1_037440	NW_004457516.1	88822	92296	R	ACA1_037440	complement(join(<88822..88879,88971..89081,89172..89308,89525..89626,89720..89824,89927..90007,90097..90186,90281..90398,90503..90611,90683..90773,90861..90987,91080..91168,91279..91369,91660..91678,91764..91935,92000..>92296))	Acanthamoeba castellanii str. Neff	14919659
ACA1_037450	mRNA	ACA1_037450	NW_004457516.1	93307	93956	D	ACA1_037450	join(<93307..93445,93507..93548,93622..93782,93846..>93956)	Acanthamoeba castellanii str. Neff	14919660
ACA1_037460	mRNA	ACA1_037460	NW_004457516.1	94014	94551	R	ACA1_037460	complement(join(<94014..94045,94123..94377,94470..>94551))	Acanthamoeba castellanii str. Neff	14919661
ACA1_037470	mRNA	ACA1_037470	NW_004457516.1	95076	97625	R	ACA1_037470	complement(join(<95076..95197,95289..95494,95563..95715,95800..96938,97055..97343,97552..>97625))	Acanthamoeba castellanii str. Neff	14919662
ACA1_037480	mRNA	ACA1_037480	NW_004457516.1	97985	100616	R	ACA1_037480	complement(join(<97985..98148,98254..98328,98437..98513,98602..98650,98755..98874,98969..99033,99121..99193,99275..99349,99457..99534,99682..99742,99849..99943,100011..100048,100121..100206,100294..100391,100532..>100616))	Acanthamoeba castellanii str. Neff	14919663
ACA1_037490	mRNA	ACA1_037490	NW_004457516.1	100985	103358	R	ACA1_037490	complement(join(<100985..101295,101320..102390,102470..102610,102719..102877,103023..103144,103258..>103358))	Acanthamoeba castellanii str. Neff	14919664
ACA1_037500	mRNA	ACA1_037500	NW_004457516.1	103779	104342	R	ACA1_037500	complement(<103779..>104342)	Acanthamoeba castellanii str. Neff	14919665
ACA1_166550	mRNA	ACA1_166550	NW_004457514.1	49	436	R	ACA1_166550	complement(join(<49..225,317..>436))	Acanthamoeba castellanii str. Neff	14919642
ACA1_166560	mRNA	ACA1_166560	NW_004457514.1	2326	4701	R	ACA1_166560	complement(join(<2326..2411,2577..2702,2771..3169,3249..3378,3447..3549,3615..3745,3822..3897,3968..4097,4193..4294,4359..4506,4633..>4701))	Acanthamoeba castellanii str. Neff	14919640
ACA1_166770	mRNA	ACA1_166770	NW_004457514.1	8462	9489	R	ACA1_166770	complement(join(<8462..8786,8879..9012,9121..9240,9319..>9489))	Acanthamoeba castellanii str. Neff	14919641
ACA1_166780	mRNA	ACA1_166780	NW_004457514.1	10503	11060	D	ACA1_166780	join(<10503..10799,10851..10883,10956..>11060)	Acanthamoeba castellanii str. Neff	14919643
ACA1_166900	mRNA	ACA1_166900	NW_004457514.1	22032	25533	R	ACA1_166900	complement(join(<22032..23420,23521..23691,23789..23902,23997..24090,24187..24362,24499..24678,24791..24853,24967..>25533))	Acanthamoeba castellanii str. Neff	14919645
ACA1_166910	mRNA	ACA1_166910	NW_004457514.1	25796	27569	R	ACA1_166910	complement(join(<25796..26499,26560..26789,26864..26933,27003..27215,27314..>27569))	Acanthamoeba castellanii str. Neff	14919646
ACA1_166930	mRNA	ACA1_166930	NW_004457514.1	30255	31900	R	ACA1_166930	complement(join(<30255..30494,30613..30744,30813..30962,31027..31097,31176..31246,31316..31349,31421..31540,31610..31708,31771..>31900))	Acanthamoeba castellanii str. Neff	14919648
ACA1_166940	mRNA	ACA1_166940	NW_004457514.1	32021	36402	R	ACA1_166940	complement(join(<32021..32227,32310..32615,32694..32834,32937..33044,33074..33232,33326..33502,33584..33676,33765..33981,34094..34320,34409..34560,34660..34774,34872..35104,35197..35371,35472..35612,35685..35854,35946..36017,36090..36137,36300..>36402))	Acanthamoeba castellanii str. Neff	14919649
ACA1_166960	mRNA	ACA1_166960	NW_004457514.1	39043	40271	D	ACA1_166960	join(<39043..39283,39385..39530,39625..39784,39870..40008,40100..>40271)	Acanthamoeba castellanii str. Neff	14919651
ACA1_166970	mRNA	ACA1_166970	NW_004457514.1	40414	43556	D	ACA1_166970	join(<40414..40498,40575..40623,40695..40806,40883..41059,41161..41403,41522..41804,41877..41979,42078..42155,42237..42293,42401..42511,42612..42753,42840..42899,42987..43041,43130..43145,43235..43365,43453..>43556)	Acanthamoeba castellanii str. Neff	14919652
ACA1_166980	mRNA	ACA1_166980	NW_004457514.1	43713	47674	R	ACA1_166980	complement(join(<43713..43793,43897..44465,44551..44635,44753..44911,45041..45324,45426..45496,45577..45646,45738..45802,45914..45969,46082..46702,47396..>47674))	Acanthamoeba castellanii str. Neff	14919653
ACA1_166990	mRNA	ACA1_166990	NW_004457514.1	48526	49110	R	ACA1_166990	complement(join(<48526..48683,48744..>49110))	Acanthamoeba castellanii str. Neff	14919626
ACA1_167000	mRNA	ACA1_167000	NW_004457514.1	49242	49927	D	ACA1_167000	join(<49242..49434,49523..49644,49799..>49927)	Acanthamoeba castellanii str. Neff	14919627
ACA1_167010	mRNA	ACA1_167010	NW_004457514.1	50383	54320	D	ACA1_167010	join(<50383..50902,51193..51318,51384..51646,51780..51952,52038..52144,52222..52309,52375..52507,52584..52710,52792..52914,52938..53063,53148..53250,53329..53401,53473..53540,53610..53701,53780..53934,54006..>54320)	Acanthamoeba castellanii str. Neff	14919628
ACA1_167020	mRNA	ACA1_167020	NW_004457514.1	54547	58817	D	ACA1_167020	join(<54547..54764,54833..54950,55061..55189,55282..55499,55597..55686,55769..55895,55973..56119,56217..56265,56368..56512,56595..56694,56785..56900,57005..57078,57147..57205,57415..57595,57675..57765,57857..57955,58037..>58817)	Acanthamoeba castellanii str. Neff	14919629
ACA1_167030	mRNA	ACA1_167030	NW_004457514.1	59305	59923	D	ACA1_167030	join(<59305..59432,59503..59624,59739..>59923)	Acanthamoeba castellanii str. Neff	14919630
ACA1_167040	mRNA	ACA1_167040	NW_004457514.1	60127	61438	D	ACA1_167040	join(<60127..60474,60607..60663,60748..60858,60983..61130,61248..>61438)	Acanthamoeba castellanii str. Neff	14919631
ACA1_167050	mRNA	ACA1_167050	NW_004457514.1	61553	63528	R	ACA1_167050	complement(join(<61553..61752,61811..61957,62046..62360,62561..62693,62803..63077,63164..63243,63305..63402,63472..>63528))	Acanthamoeba castellanii str. Neff	14919632
ACA1_167060	mRNA	ACA1_167060	NW_004457514.1	63647	65738	R	ACA1_167060	complement(join(<63647..63815,63892..63979,64050..64270,64297..64713,64729..64757,64836..64989,65029..65210,65346..>65738))	Acanthamoeba castellanii str. Neff	14919633
ACA1_167070	mRNA	ACA1_167070	NW_004457514.1	65845	72774	R	ACA1_167070	complement(join(<65845..66780,67006..67313,67398..67716,67786..68000,68230..68835,69042..69281,69348..69474,69666..69776,69995..70411,70598..70828,70905..72148,72207..72356,72425..72632,72736..>72774))	Acanthamoeba castellanii str. Neff	14919634
ACA1_167080	mRNA	ACA1_167080	NW_004457514.1	75138	75938	D	ACA1_167080	join(<75138..75260,75331..75370,75445..75602,75668..75743,75820..>75938)	Acanthamoeba castellanii str. Neff	14919635
ACA1_167090	mRNA	ACA1_167090	NW_004457514.1	76081	77042	R	ACA1_167090	complement(join(<76081..76323,76395..76461,76518..76743,76799..76883,76953..>77042))	Acanthamoeba castellanii str. Neff	14919636
ACA1_167100	mRNA	ACA1_167100	NW_004457514.1	78288	79824	D	ACA1_167100	join(<78288..78345,78422..79563,79648..>79824)	Acanthamoeba castellanii str. Neff	14919637
ACA1_167110	mRNA	ACA1_167110	NW_004457514.1	80008	82202	D	ACA1_167110	join(<80008..81206,81286..81465,81575..81727,81796..81898,82006..82090,82144..>82202)	Acanthamoeba castellanii str. Neff	14919638
ACA1_167120	mRNA	ACA1_167120	NW_004457514.1	82877	83225	D	ACA1_167120	join(<82877..82999,83070..>83225)	Acanthamoeba castellanii str. Neff	14919639
ACA1_150200	mRNA	ACA1_150200	NW_004457511.1	40	380	R	ACA1_150200	complement(join(<40..169,265..>380))	Acanthamoeba castellanii str. Neff	14919625
ACA1_150310	mRNA	ACA1_150310	NW_004457511.1	2901	4975	R	ACA1_150310	complement(join(<2901..3633,3705..3790,3810..3856,3868..3940,4068..4135,4259..4397,4491..4566,4674..>4975))	Acanthamoeba castellanii str. Neff	14919585
ACA1_150320	mRNA	ACA1_150320	NW_004457511.1	5143	6619	D	ACA1_150320	join(<5143..5753,5830..5992,6102..6221,6298..6563,6604..>6619)	Acanthamoeba castellanii str. Neff	14919586
ACA1_150430	mRNA	ACA1_150430	NW_004457511.1	6866	9035	D	ACA1_150430	join(<6866..6928,7012..7147,7235..7370,7442..7689,7773..8032,8109..8225,8305..8401,8471..8532,8631..8833,8900..>9035)	Acanthamoeba castellanii str. Neff	14919587
ACA1_150540	mRNA	ACA1_150540	NW_004457511.1	11233	11656	D	ACA1_150540	join(<11233..11453,11557..>11656)	Acanthamoeba castellanii str. Neff	14919588
ACA1_150550	mRNA	ACA1_150550	NW_004457511.1	12154	12415	D	ACA1_150550	join(<12154..12163,12246..>12415)	Acanthamoeba castellanii str. Neff	14919589
ACA1_150560	mRNA	ACA1_150560	NW_004457511.1	12571	12942	R	ACA1_150560	complement(join(<12571..12630,12696..12758,12823..>12942))	Acanthamoeba castellanii str. Neff	14919590
ACA1_150570	mRNA	ACA1_150570	NW_004457511.1	13438	14440	R	ACA1_150570	complement(join(<13438..13500,13564..13660,13792..13948,14044..14076,14287..>14440))	Acanthamoeba castellanii str. Neff	14919591
ACA1_150580	mRNA	ACA1_150580	NW_004457511.1	14843	16074	D	ACA1_150580	join(<14843..15040,15120..15871,15975..>16074)	Acanthamoeba castellanii str. Neff	14919592
ACA1_150590	mRNA	ACA1_150590	NW_004457511.1	16572	17604	D	ACA1_150590	join(<16572..16581,16667..16809,17293..>17604)	Acanthamoeba castellanii str. Neff	14919593
ACA1_150700	mRNA	ACA1_150700	NW_004457511.1	17843	19399	R	ACA1_150700	complement(join(<17843..18904,19076..19267,19325..>19399))	Acanthamoeba castellanii str. Neff	14919594
ACA1_150710	mRNA	ACA1_150710	NW_004457511.1	19939	22778	D	ACA1_150710	join(<19939..20017,20074..20210,20271..20364,20422..20479,20559..20652,20751..>22778)	Acanthamoeba castellanii str. Neff	14919595
ACA1_150720	mRNA	ACA1_150720	NW_004457511.1	23689	26694	R	ACA1_150720	complement(join(<23689..23763,23849..23953,24032..24138,24301..24390,24479..24601,24711..24813,24944..25002,25150..25244,25359..25474,25616..25722,25832..25878,26001..26078,26204..26273,26353..26505,26679..>26694))	Acanthamoeba castellanii str. Neff	14919596
ACA1_150730	mRNA	ACA1_150730	NW_004457511.1	26946	29627	D	ACA1_150730	join(<26946..27009,27170..27283,27430..27554,27649..27713,27815..>29627)	Acanthamoeba castellanii str. Neff	14919597
ACA1_150740	mRNA	ACA1_150740	NW_004457511.1	29815	31339	R	ACA1_150740	complement(join(<29815..30054,30172..30248,30317..30383,30444..30536,30661..30765,30858..31037,31111..31163,31249..>31339))	Acanthamoeba castellanii str. Neff	14919598
ACA1_150950	mRNA	ACA1_150950	NW_004457511.1	31527	35965	D	ACA1_150950	join(<31527..31777,31850..31920,32059..32129,32240..32346,32477..32541,32642..32698,32751..32882,33022..33128,33271..33380,33490..33602,33680..33798,33875..33997,34028..34196,34298..34364,34468..34574,34657..34732,34876..34978,35059..35369,35468..35691,35826..>35965)	Acanthamoeba castellanii str. Neff	14919599
ACA1_150960	mRNA	ACA1_150960	NW_004457511.1	36326	38137	D	ACA1_150960	join(<36326..36454,36598..36741,36912..36948,37043..37247,37297..37400,37540..37788,37896..>38137)	Acanthamoeba castellanii str. Neff	14919600
ACA1_151070	mRNA	ACA1_151070	NW_004457511.1	43864	44784	D	ACA1_151070	join(<43864..44268,44338..>44784)	Acanthamoeba castellanii str. Neff	14919601
ACA1_151080	mRNA	ACA1_151080	NW_004457511.1	44781	47174	R	ACA1_151080	complement(join(<44781..44973,45068..45219,45307..45370,45511..45587,45748..45825,45967..46078,46172..46232,46352..46556,46675..46839,46876..46962,47001..>47174))	Acanthamoeba castellanii str. Neff	14919602
ACA1_151090	mRNA	ACA1_151090	NW_004457511.1	47469	50695	R	ACA1_151090	complement(join(<47469..47546,47636..47723,47886..48041,48173..48267,48486..48567,48667..48785,48998..49098,49218..49289,49423..49551,49643..49768,49917..49995,50168..>50695))	Acanthamoeba castellanii str. Neff	14919603
ACA1_151100	mRNA	ACA1_151100	NW_004457511.1	50801	57640	R	ACA1_151100	complement(join(<50801..51131,51299..51417,51571..51837,52165..52287,52483..52713,52913..53017,53162..53352,53510..53570,53655..53807,54011..54193,54432..54545,54661..54771,54846..54915,55087..55212,55307..55419,55552..55699,55808..56040,56197..56270,56457..56601,56789..56953,57081..57206,57413..>57640))	Acanthamoeba castellanii str. Neff	14919604
ACA1_151110	mRNA	ACA1_151110	NW_004457511.1	58010	63498	D	ACA1_151110	join(<58010..58574,58705..58808,59025..59171,59385..59537,59702..59958,60058..60238,60407..60512,60618..60700,60835..60928,60952..60987,61066..61200,61346..61503,61649..61753,61873..62053,62170..62254,62367..62479,62591..62739,62881..63070,63175..63278,63394..>63498)	Acanthamoeba castellanii str. Neff	14919605
ACA1_151230	mRNA	ACA1_151230	NW_004457511.1	75000	75455	D	ACA1_151230	<75000..>75455	Acanthamoeba castellanii str. Neff	14919607
ACA1_151240	mRNA	ACA1_151240	NW_004457511.1	75785	80603	R	ACA1_151240	complement(join(<75785..75792,75827..75931,76063..78904,79099..79232,79345..79564,79773..79890,80122..80333,80517..>80603))	Acanthamoeba castellanii str. Neff	14919608
ACA1_151250	mRNA	ACA1_151250	NW_004457511.1	81053	82866	D	ACA1_151250	join(<81053..81709,81862..82026,82160..82275,82360..82510,82619..82742,82766..>82866)	Acanthamoeba castellanii str. Neff	14919609
ACA1_151260	mRNA	ACA1_151260	NW_004457511.1	82961	85573	D	ACA1_151260	join(<82961..83170,83291..83566,83727..83784,83886..84008,84148..84217,84262..84270,84320..85044,85175..85295,85450..>85573)	Acanthamoeba castellanii str. Neff	14919610
ACA1_151270	mRNA	ACA1_151270	NW_004457511.1	86677	88425	D	ACA1_151270	join(<86677..86883,86897..87631,87726..87851,87958..>88425)	Acanthamoeba castellanii str. Neff	14919611
ACA1_151280	mRNA	ACA1_151280	NW_004457511.1	88557	91308	D	ACA1_151280	join(<88557..88665,88733..88835,88969..89059,89266..89323,89534..89598,89761..89829,89993..90123,90313..90399,90510..90647,90802..90898,90994..91098,91195..>91308)	Acanthamoeba castellanii str. Neff	14919612
ACA1_151290	mRNA	ACA1_151290	NW_004457511.1	91403	95120	R	ACA1_151290	complement(join(<91403..91659,91831..91968,92147..92332,92429..93005,93122..93334,93467..93565,93640..93869,93969..94193,94339..94436,94522..94738,94821..94959,95088..>95120))	Acanthamoeba castellanii str. Neff	14919613
ACA1_151300	mRNA	ACA1_151300	NW_004457511.1	95575	96645	D	ACA1_151300	join(<95575..95672,95778..95958,96131..96512,96599..>96645)	Acanthamoeba castellanii str. Neff	14919614
ACA1_151310	mRNA	ACA1_151310	NW_004457511.1	96939	99931	R	ACA1_151310	complement(join(<96939..97235,97327..97453,97557..97715,97843..97900,98042..98114,98188..98483,98603..98633,98752..98831,99189..99267,99334..99401,99464..99510,99612..>99931))	Acanthamoeba castellanii str. Neff	14919615
ACA1_151320	mRNA	ACA1_151320	NW_004457511.1	100308	103573	R	ACA1_151320	complement(join(<100308..100415,100523..100615,100736..100848,101032..101065,101220..101380,101463..101605,101784..101944,102093..102232,102348..102512,102608..102682,102769..103003,103109..103326,103552..>103573))	Acanthamoeba castellanii str. Neff	14919616
ACA1_151330	mRNA	ACA1_151330	NW_004457511.1	103887	106961	R	ACA1_151330	complement(join(<103887..104062,104153..104276,104351..104444,104536..104579,104648..104712,104794..104922,105014..105140,105237..105292,105401..105506,105630..105769,105874..106137,106221..106350,106467..106580,106706..106771,106857..>106961))	Acanthamoeba castellanii str. Neff	14919617
ACA1_151340	mRNA	ACA1_151340	NW_004457511.1	107494	108443	D	ACA1_151340	join(<107494..107789,107991..108061,108151..>108443)	Acanthamoeba castellanii str. Neff	14919618
ACA1_151350	mRNA	ACA1_151350	NW_004457511.1	108588	111790	D	ACA1_151350	join(<108588..108749,109113..109148,109286..109372,109982..110069,110163..110242,110408..110493,110586..110631,110743..110877,111012..111131,111226..111331,111437..111600,111683..>111790)	Acanthamoeba castellanii str. Neff	14919619
ACA1_151360	mRNA	ACA1_151360	NW_004457511.1	112557	114141	D	ACA1_151360	join(<112557..112718,112816..113431,113507..113645,113760..>114141)	Acanthamoeba castellanii str. Neff	14919620
ACA1_151370	mRNA	ACA1_151370	NW_004457511.1	114295	117460	R	ACA1_151370	complement(join(<114295..114342,114475..114543,114605..114655,114760..114984,115091..115195,115333..115458,115610..115713,115796..115895,116014..116087,116213..116330,116464..116540,116652..116769,116882..117017,117049..117237,117390..>117460))	Acanthamoeba castellanii str. Neff	14919621
ACA1_151380	mRNA	ACA1_151380	NW_004457511.1	118281	118567	R	ACA1_151380	complement(join(<118281..118354,118414..>118567))	Acanthamoeba castellanii str. Neff	14919622
ACA1_151390	mRNA	ACA1_151390	NW_004457511.1	119598	119845	R	ACA1_151390	complement(join(<119598..119656,119704..>119845))	Acanthamoeba castellanii str. Neff	14919623
ACA1_151400	mRNA	ACA1_151400	NW_004457511.1	120077	120493	R	ACA1_151400	complement(join(<120077..120303,120358..>120493))	Acanthamoeba castellanii str. Neff	14919624
ACA1_166220	mRNA	ACA1_166220	NW_004457509.1	50	544	D	ACA1_166220	join(<50..270,388..>544)	Acanthamoeba castellanii str. Neff	14919584
ACA1_166330	mRNA	ACA1_166330	NW_004457509.1	5960	6367	R	ACA1_166330	complement(<5960..>6367)	Acanthamoeba castellanii str. Neff	14919582
ACA1_166340	mRNA	ACA1_166340	NW_004457509.1	6795	7928	R	ACA1_166340	complement(join(<6795..7170,7381..7683,7786..>7928))	Acanthamoeba castellanii str. Neff	14919583
ACA1_166450	mRNA	ACA1_166450	NW_004457509.1	14919	16057	D	ACA1_166450	join(<14919..14987,15045..15158,15240..15752,15890..>16057)	Acanthamoeba castellanii str. Neff	14919581
ACA1_000210	mRNA	ACA1_000210	NW_004457507.1	7839	8176	D	ACA1_000210	join(<7839..7935,8079..>8176)	Acanthamoeba castellanii str. Neff	14919579
ACA1_000220	mRNA	ACA1_000220	NW_004457507.1	8261	8804	R	ACA1_000220	complement(join(<8261..8475,8576..>8804))	Acanthamoeba castellanii str. Neff	14919580
ACA1_000330	mRNA	ACA1_000330	NW_004457507.1	14739	19223	R	ACA1_000330	complement(join(<14739..14852,14935..16239,16318..16456,16546..16715,16824..16942,17023..17178,17276..17407,17497..17639,17729..17917,18001..18400,18779..18941,19047..>19223))	Acanthamoeba castellanii str. Neff	14919578
ACA1_317980	mRNA	ACA1_317980	NW_004457505.1	13402	14210	D	ACA1_317980	join(<13402..13602,13661..13777,13856..13936,14071..14169,14193..>14210)	Acanthamoeba castellanii str. Neff	14919577
ACA1_317990	mRNA	ACA1_317990	NW_004457505.1	14241	14880	D	ACA1_317990	join(<14241..14311,14374..14481,14583..>14880)	Acanthamoeba castellanii str. Neff	14919576
ACA1_040420	mRNA	ACA1_040420	NW_004457503.1	32	359	R	ACA1_040420	complement(join(<32..96,155..>359))	Acanthamoeba castellanii str. Neff	14919564
ACA1_040430	mRNA	ACA1_040430	NW_004457503.1	443	937	D	ACA1_040430	<443..>937	Acanthamoeba castellanii str. Neff	14919569
ACA1_040440	mRNA	ACA1_040440	NW_004457503.1	1622	5129	R	ACA1_040440	complement(join(<1622..1875,1948..2015,2090..2249,2319..2398,2503..2649,2726..2802,2888..2989,3132..3447,3542..3725,3825..3942,4046..4110,4124..4146,4391..4491,4605..4772,4854..>5129))	Acanthamoeba castellanii str. Neff	14919570
ACA1_040450	mRNA	ACA1_040450	NW_004457503.1	5544	7251	D	ACA1_040450	join(<5544..5670,5751..5839,6046..6140,6225..6298,6382..6480,6554..6656,6748..6799,6862..6990,7081..>7251)	Acanthamoeba castellanii str. Neff	14919565
ACA1_040460	mRNA	ACA1_040460	NW_004457503.1	7408	8843	R	ACA1_040460	complement(join(<7408..7573,7675..7984,8074..8390,8494..8603,8670..>8843))	Acanthamoeba castellanii str. Neff	14919566
ACA1_040470	mRNA	ACA1_040470	NW_004457503.1	9061	12333	D	ACA1_040470	join(<9061..9158,9248..9320,9432..9577,9672..9769,9836..9898,9967..10028,10102..10219,10300..10378,10460..10481,10581..10666,10729..10773,10852..10895,10971..11088,11156..11180,11264..11374,11471..11596,11683..11824,11911..12210,12293..>12333)	Acanthamoeba castellanii str. Neff	14919567
ACA1_040480	mRNA	ACA1_040480	NW_004457503.1	12983	16666	D	ACA1_040480	join(<12983..13207,13277..13424,13499..13551,13619..13709,13779..13921,14056..14182,14277..14374,14439..14484,14607..14644,14724..14813,14895..14994,15074..15203,15292..15326,15423..15523,15606..15665,15751..16045,16128..16223,16308..16459,16514..>16666)	Acanthamoeba castellanii str. Neff	14919568
ACA1_040500	mRNA	ACA1_040500	NW_004457503.1	20629	23506	R	ACA1_040500	complement(join(<20629..20716,20799..20932,21034..21147,21255..21440,21552..21617,21746..22012,22089..22195,22277..22445,22530..22629,22752..22897,23093..23154,23260..>23506))	Acanthamoeba castellanii str. Neff	14919572
ACA1_040510	mRNA	ACA1_040510	NW_004457503.1	23728	25423	R	ACA1_040510	complement(join(<23728..24012,24109..24267,24349..24472,24570..24702,24779..24895,24997..>25423))	Acanthamoeba castellanii str. Neff	14919573
ACA1_040520	mRNA	ACA1_040520	NW_004457503.1	25550	27385	D	ACA1_040520	join(<25550..25643,25721..25879,25955..26068,26145..26224,26345..26437,26528..26611,26718..26898,26981..27133,27192..>27385)	Acanthamoeba castellanii str. Neff	14919574
ACA1_040530	mRNA	ACA1_040530	NW_004457503.1	27456	29760	R	ACA1_040530	complement(join(<27456..27500,27725..27812,27861..28009,28094..28145,28229..28287,28358..28436,28518..28609,28748..28809,28884..29022,29166..29340,29438..29587,29723..>29760))	Acanthamoeba castellanii str. Neff	14919575
ACA1_040640	mRNA	ACA1_040640	NW_004457503.1	33087	34831	D	ACA1_040640	join(<33087..33164,33263..33380,33458..33535,33632..33701,33770..34121,34203..34263,34340..34519,34616..34788,34826..>34831)	Acanthamoeba castellanii str. Neff	14919533
ACA1_040650	mRNA	ACA1_040650	NW_004457503.1	36401	37697	D	ACA1_040650	join(<36401..36617,36820..36918,37199..37434,37521..>37697)	Acanthamoeba castellanii str. Neff	14919534
ACA1_040660	mRNA	ACA1_040660	NW_004457503.1	38008	39110	D	ACA1_040660	join(<38008..38185,38265..38389,38449..38808,38903..38948,39013..>39110)	Acanthamoeba castellanii str. Neff	14919535
ACA1_040670	mRNA	ACA1_040670	NW_004457503.1	39604	41974	D	ACA1_040670	join(<39604..39805,39866..40117,40205..40394,40482..40663,40763..40931,41031..41111,41184..41490,41587..41646,41708..>41974)	Acanthamoeba castellanii str. Neff	14919536
ACA1_040680	mRNA	ACA1_040680	NW_004457503.1	42678	47102	D	ACA1_040680	join(<42678..42898,43158..43216,43343..43455,43538..43636,43713..44293,44365..44654,44725..44881,44971..45142,45223..45335,45429..45579,45668..45774,45847..46273,46325..46585,46739..46897,47010..>47102)	Acanthamoeba castellanii str. Neff	14919537
ACA1_040690	mRNA	ACA1_040690	NW_004457503.1	48012	52235	D	ACA1_040690	join(<48012..48081,48161..48327,48493..48582,48698..48865,49028..49437,49532..49590,49815..50024,50118..50337,50422..50593,50698..50807,50891..50996,51147..>52235)	Acanthamoeba castellanii str. Neff	14919538
ACA1_040700	mRNA	ACA1_040700	NW_004457503.1	52381	55010	R	ACA1_040700	complement(join(<52381..52688,52786..52901,52994..53080,53150..53313,53395..53592,53682..53940,54029..54157,54228..54278,54420..54517,54651..54748,54788..>55010))	Acanthamoeba castellanii str. Neff	14919539
ACA1_040710	mRNA	ACA1_040710	NW_004457503.1	55468	58645	D	ACA1_040710	join(<55468..55935,56051..56241,56331..56475,56562..56753,56855..57068,57174..57248,57316..57461,57546..57866,57927..58022,58099..58245,58335..58409,58517..>58645)	Acanthamoeba castellanii str. Neff	14919540
ACA1_040720	mRNA	ACA1_040720	NW_004457503.1	59000	64266	D	ACA1_040720	join(<59000..59161,59226..59387,59449..59468,59563..59753,59841..59980,60081..60403,60485..60711,60802..60979,61085..61279,61362..61455,61544..61979,62075..62136,62207..63069,63187..63472,63559..63777,63862..>64266)	Acanthamoeba castellanii str. Neff	14919541
ACA1_040730	mRNA	ACA1_040730	NW_004457503.1	64451	71096	R	ACA1_040730	complement(join(<64451..65095,65260..65628,65739..65998,66083..66277,66357..66645,66740..66883,66960..67081,67161..67463,67576..68170,68334..68404,68486..68938,69044..69183,69287..69849,69883..69901,70041..70191,70277..70397,70534..70675,70786..70880,70998..>71096))	Acanthamoeba castellanii str. Neff	14919542
ACA1_040740	mRNA	ACA1_040740	NW_004457503.1	71577	72999	D	ACA1_040740	join(<71577..71936,72033..72076,72228..72323,72413..72572,72660..72762,72779..>72999)	Acanthamoeba castellanii str. Neff	14919543
ACA1_040750	mRNA	ACA1_040750	NW_004457503.1	73368	75515	D	ACA1_040750	join(<73368..73736,73841..73979,74081..74349,74454..74681,74778..74903,74999..75091,75213..>75515)	Acanthamoeba castellanii str. Neff	14919544
ACA1_040760	mRNA	ACA1_040760	NW_004457503.1	75657	76643	R	ACA1_040760	complement(join(<75657..75776,75847..75930,76054..76175,76269..76448,76535..>76643))	Acanthamoeba castellanii str. Neff	14919545
ACA1_040770	mRNA	ACA1_040770	NW_004457503.1	76934	80739	R	ACA1_040770	complement(join(<76934..77356,77445..78047,78531..78760,78844..79005,79107..>80739))	Acanthamoeba castellanii str. Neff	14919546
ACA1_040780	mRNA	ACA1_040780	NW_004457503.1	81109	81575	R	ACA1_040780	complement(join(<81109..81467,81527..>81575))	Acanthamoeba castellanii str. Neff	14919547
ACA1_040790	mRNA	ACA1_040790	NW_004457503.1	81981	84554	R	ACA1_040790	complement(<81981..>84554)	Acanthamoeba castellanii str. Neff	14919548
ACA1_040800	mRNA	ACA1_040800	NW_004457503.1	84793	87465	D	ACA1_040800	join(<84793..85094,85220..85545,85714..85797,85867..86095,86172..86287,86384..86473,86543..86603,86699..86793,86886..86936,87013..87135,87215..87328,87392..>87465)	Acanthamoeba castellanii str. Neff	14919549
ACA1_040810	mRNA	ACA1_040810	NW_004457503.1	87612	87936	D	ACA1_040810	join(<87612..87710,87793..>87936)	Acanthamoeba castellanii str. Neff	14919550
ACA1_040820	mRNA	ACA1_040820	NW_004457503.1	88051	88978	R	ACA1_040820	complement(join(<88051..88629,88691..>88978))	Acanthamoeba castellanii str. Neff	14919551
ACA1_040830	mRNA	ACA1_040830	NW_004457503.1	89139	90003	R	ACA1_040830	complement(join(<89139..89216,89312..89446,89519..89562,89621..89718,89790..89889,89955..>90003))	Acanthamoeba castellanii str. Neff	14919552
ACA1_040840	mRNA	ACA1_040840	NW_004457503.1	90159	93954	R	ACA1_040840	complement(join(<90159..90181,90299..90470,90542..90602,90670..90858,90909..91030,91098..91238,91321..91473,91535..91682,91754..91851,91944..92100,92166..92233,92312..92518,92610..92717,92814..92915,92977..93288,93372..93523,93595..93643,93709..>93954))	Acanthamoeba castellanii str. Neff	14919553
ACA1_040850	mRNA	ACA1_040850	NW_004457503.1	94135	94741	D	ACA1_040850	join(<94135..94245,94319..>94741)	Acanthamoeba castellanii str. Neff	14919554
ACA1_040860	mRNA	ACA1_040860	NW_004457503.1	94971	96469	R	ACA1_040860	complement(join(<94971..95096,95194..95388,95461..95592,95665..95860,95937..96038,96115..96221,96287..>96469))	Acanthamoeba castellanii str. Neff	14919555
ACA1_040870	mRNA	ACA1_040870	NW_004457503.1	96605	98140	R	ACA1_040870	complement(<96605..>98140)	Acanthamoeba castellanii str. Neff	14919556
ACA1_040880	mRNA	ACA1_040880	NW_004457503.1	98360	104015	R	ACA1_040880	complement(join(<98360..98434,98537..98584,98668..98793,98874..98937,98960..99099,99191..99252,99445..99555,99628..100810,100891..101015,101098..101210,101266..101411,101504..101564,101630..102781,102859..102929,103002..103057,103125..103241,103319..103856,103959..>104015))	Acanthamoeba castellanii str. Neff	14919557
ACA1_040890	mRNA	ACA1_040890	NW_004457503.1	104168	105029	R	ACA1_040890	complement(join(<104168..104372,104432..104557,104693..104726,104816..>105029))	Acanthamoeba castellanii str. Neff	14919558
ACA1_041000	mRNA	ACA1_041000	NW_004457503.1	105216	105386	D	ACA1_041000	<105216..>105386	Acanthamoeba castellanii str. Neff	14919559
ACA1_041110	mRNA	ACA1_041110	NW_004457503.1	105950	106477	D	ACA1_041110	join(<105950..106373,106449..>106477)	Acanthamoeba castellanii str. Neff	14919560
ACA1_041220	mRNA	ACA1_041220	NW_004457503.1	107873	108336	D	ACA1_041220	join(<107873..108040,108123..108272,108295..>108336)	Acanthamoeba castellanii str. Neff	14919561
ACA1_041430	mRNA	ACA1_041430	NW_004457503.1	113347	115892	D	ACA1_041430	join(<113347..113659,113746..113878,113959..114130,115029..115475,115507..115606,115682..115792,115873..>115892)	Acanthamoeba castellanii str. Neff	14919562
ACA1_041640	mRNA	ACA1_041640	NW_004457503.1	116625	117374	D	ACA1_041640	<116625..>117374	Acanthamoeba castellanii str. Neff	14919563
ACA1_015470	mRNA	ACA1_015470	NW_004457501.1	28	1179	R	ACA1_015470	complement(join(<28..833,891..>1179))	Acanthamoeba castellanii str. Neff	14919524
ACA1_015480	mRNA	ACA1_015480	NW_004457501.1	1528	2818	D	ACA1_015480	join(<1528..1738,1821..1937,2031..2123,2231..2347,2432..2551,2631..>2818)	Acanthamoeba castellanii str. Neff	14919521
ACA1_015490	mRNA	ACA1_015490	NW_004457501.1	2914	4487	D	ACA1_015490	join(<2914..3028,3129..3254,3332..3464,3536..3648,3747..3872,3949..4080,4160..4282,4354..>4487)	Acanthamoeba castellanii str. Neff	14919522
ACA1_015500	mRNA	ACA1_015500	NW_004457501.1	5301	7977	D	ACA1_015500	join(<5301..5408,5481..5564,5657..5749,5838..5962,6050..6124,6198..6268,6352..6416,6531..6616,6694..6852,6958..7056,7121..7193,7252..7309,7386..7446,7545..7627,7682..7800,7870..>7977)	Acanthamoeba castellanii str. Neff	14919523
ACA1_015510	mRNA	ACA1_015510	NW_004457501.1	8072	11473	R	ACA1_015510	complement(join(<8072..8162,8254..8363,8444..8567,8723..8790,8861..8968,9052..9162,9334..9401,9453..9522,9599..9669,9816..10011,10100..10214,10306..10370,10489..10909,10990..11078,11167..11218,11292..>11473))	Acanthamoeba castellanii str. Neff	14919520
ACA1_015520	mRNA	ACA1_015520	NW_004457501.1	11573	12667	R	ACA1_015520	complement(<11573..>12667)	Acanthamoeba castellanii str. Neff	14919525
ACA1_015530	mRNA	ACA1_015530	NW_004457501.1	13083	13931	D	ACA1_015530	<13083..>13931	Acanthamoeba castellanii str. Neff	14919526
ACA1_015540	mRNA	ACA1_015540	NW_004457501.1	14584	15945	D	ACA1_015540	join(<14584..14743,14790..15763,15859..>15945)	Acanthamoeba castellanii str. Neff	14919527
ACA1_015550	mRNA	ACA1_015550	NW_004457501.1	16796	19633	R	ACA1_015550	complement(join(<16796..17789,17875..17979,18067..18181,18259..18406,18478..18523,18628..18845,18971..19063,19133..>19633))	Acanthamoeba castellanii str. Neff	14919528
ACA1_015560	mRNA	ACA1_015560	NW_004457501.1	20130	21254	D	ACA1_015560	join(<20130..20286,20377..20456,20519..20616,20699..20788,20876..20968,21050..21136,21206..>21254)	Acanthamoeba castellanii str. Neff	14919529
ACA1_015580	mRNA	ACA1_015580	NW_004457501.1	24516	25093	D	ACA1_015580	join(<24516..24578,24656..24737,24811..24898,24961..>25093)	Acanthamoeba castellanii str. Neff	14919531
ACA1_015590	mRNA	ACA1_015590	NW_004457501.1	25250	26450	D	ACA1_015590	join(<25250..25282,25361..25445,25546..25650,25771..25951,26015..26151,26218..>26450)	Acanthamoeba castellanii str. Neff	14919532
ACA1_392690	mRNA	ACA1_392690	NW_004457498.1	73	769	D	ACA1_392690	join(<73..135,208..414,533..>769)	Acanthamoeba castellanii str. Neff	14919433
ACA1_392810	mRNA	ACA1_392810	NW_004457498.1	7720	8028	R	ACA1_392810	complement(<7720..>8028)	Acanthamoeba castellanii str. Neff	14919480
ACA1_392920	mRNA	ACA1_392920	NW_004457498.1	8675	8947	D	ACA1_392920	<8675..>8947	Acanthamoeba castellanii str. Neff	14919481
ACA1_392930	mRNA	ACA1_392930	NW_004457498.1	9018	9924	D	ACA1_392930	join(<9018..9497,9620..9741,9816..>9924)	Acanthamoeba castellanii str. Neff	14919482
ACA1_392940	mRNA	ACA1_392940	NW_004457498.1	9911	11145	R	ACA1_392940	complement(join(<9911..10138,10217..10308,10387..10488,10567..10645,10722..10792,10869..10912,10994..>11145))	Acanthamoeba castellanii str. Neff	14919483
ACA1_392950	mRNA	ACA1_392950	NW_004457498.1	12118	14769	D	ACA1_392950	join(<12118..12340,12423..12496,12594..12696,12778..12980,13077..13181,13277..13315,13373..13408,13488..13561,13649..13763,13835..13917,13995..14068,14156..14226,14321..14542,14656..>14769)	Acanthamoeba castellanii str. Neff	14919484
ACA1_392960	mRNA	ACA1_392960	NW_004457498.1	14898	15831	R	ACA1_392960	complement(join(<14898..14970,15041..15093,15166..15243,15320..15423,15516..15622,15713..>15831))	Acanthamoeba castellanii str. Neff	14919434
ACA1_392970	mRNA	ACA1_392970	NW_004457498.1	16025	18002	D	ACA1_392970	join(<16025..16432,16542..16629,16719..16834,16926..>18002)	Acanthamoeba castellanii str. Neff	14919435
ACA1_392980	mRNA	ACA1_392980	NW_004457498.1	18154	19835	D	ACA1_392980	join(<18154..18357,18456..18659,18761..18842,18938..18999,19062..19308,19405..19533,19617..19735,19806..>19835)	Acanthamoeba castellanii str. Neff	14919436
ACA1_392990	mRNA	ACA1_392990	NW_004457498.1	21236	23788	D	ACA1_392990	join(<21236..21382,21467..21590,21791..21851,21912..22042,22149..22244,22319..22397,22491..22533,22635..22690,22762..22819,22888..22960,23036..23113,23199..23249,23320..23370,23439..23586,23677..>23788)	Acanthamoeba castellanii str. Neff	14919437
ACA1_393000	mRNA	ACA1_393000	NW_004457498.1	23866	25254	R	ACA1_393000	complement(<23866..>25254)	Acanthamoeba castellanii str. Neff	14919438
ACA1_393010	mRNA	ACA1_393010	NW_004457498.1	25804	27774	D	ACA1_393010	join(<25804..25917,25976..26030,26100..26211,26295..26409,26487..26612,26710..26923,27010..27320,27400..>27774)	Acanthamoeba castellanii str. Neff	14919439
ACA1_393020	mRNA	ACA1_393020	NW_004457498.1	28117	28469	D	ACA1_393020	join(<28117..28228,28303..>28469)	Acanthamoeba castellanii str. Neff	14919440
ACA1_393030	mRNA	ACA1_393030	NW_004457498.1	29263	29715	D	ACA1_393030	join(<29263..29500,29582..>29715)	Acanthamoeba castellanii str. Neff	14919441
ACA1_393040	mRNA	ACA1_393040	NW_004457498.1	30426	30808	D	ACA1_393040	join(<30426..30567,30633..>30808)	Acanthamoeba castellanii str. Neff	14919442
ACA1_393050	mRNA	ACA1_393050	NW_004457498.1	30957	34492	R	ACA1_393050	complement(join(<30957..31216,31311..31394,31470..31623,31717..31878,31966..32061,32143..32250,32358..32520,32615..32961,33102..33186,33288..33723,34036..>34492))	Acanthamoeba castellanii str. Neff	14919443
ACA1_393060	mRNA	ACA1_393060	NW_004457498.1	34766	38538	R	ACA1_393060	complement(join(<34766..34909,34920..35361,35394..36054,36129..36616,36693..36789,36861..36940,37030..37103,37164..37306,37376..37509,37592..>38538))	Acanthamoeba castellanii str. Neff	14919444
ACA1_393070	mRNA	ACA1_393070	NW_004457498.1	39344	46104	D	ACA1_393070	join(<39344..39495,39566..39639,39708..39791,39887..39939,40009..40059,40139..40238,40337..40505,40595..40751,40826..40961,43589..43717,43782..43904,44109..44191,44343..44450,44523..44586,44658..44746,44822..44935,44997..45170,45256..>46104)	Acanthamoeba castellanii str. Neff	14919445
ACA1_393280	mRNA	ACA1_393280	NW_004457498.1	49788	52935	D	ACA1_393280	join(<49788..49876,49940..50066,50094..50211,50278..50388,50467..50523,50597..50686,50773..50906,50977..51114,51193..51330,51396..51513,51570..51635,51704..51837,51916..52043,52128..52203,52288..>52935)	Acanthamoeba castellanii str. Neff	14919446
ACA1_393390	mRNA	ACA1_393390	NW_004457498.1	54371	56516	D	ACA1_393390	join(<54371..54443,54557..54659,54834..54963,55085..55238,55383..55702,55799..55937,56054..56259,56370..>56516)	Acanthamoeba castellanii str. Neff	14919447
ACA1_393400	mRNA	ACA1_393400	NW_004457498.1	56693	57728	R	ACA1_393400	complement(join(<56693..56737,56838..57129,57577..>57728))	Acanthamoeba castellanii str. Neff	14919448
ACA1_393510	mRNA	ACA1_393510	NW_004457498.1	57968	58761	D	ACA1_393510	join(<57968..58519,58678..>58761)	Acanthamoeba castellanii str. Neff	14919449
ACA1_393520	mRNA	ACA1_393520	NW_004457498.1	59294	62321	R	ACA1_393520	complement(join(<59294..59656,59736..60172,60278..60488,60596..60685,60808..61528,61666..61847,61940..62110,62247..>62321))	Acanthamoeba castellanii str. Neff	14919450
ACA1_393530	mRNA	ACA1_393530	NW_004457498.1	63031	65991	D	ACA1_393530	join(<63031..63579,63694..63773,63898..63992,64085..64212,64358..64446,64577..64692,64795..64922,65075..65345,65401..65775,65861..>65991)	Acanthamoeba castellanii str. Neff	14919451
ACA1_393540	mRNA	ACA1_393540	NW_004457498.1	66097	66791	D	ACA1_393540	join(<66097..66466,66535..>66791)	Acanthamoeba castellanii str. Neff	14919452
ACA1_393550	mRNA	ACA1_393550	NW_004457498.1	67434	68370	R	ACA1_393550	complement(join(<67434..67716,67850..67912,68011..68089,68289..>68370))	Acanthamoeba castellanii str. Neff	14919453
ACA1_393560	mRNA	ACA1_393560	NW_004457498.1	68671	69764	D	ACA1_393560	join(<68671..68675,68801..68853,68921..69058,69140..69303,69408..>69764)	Acanthamoeba castellanii str. Neff	14919454
ACA1_393570	mRNA	ACA1_393570	NW_004457498.1	69965	73704	R	ACA1_393570	complement(join(<69965..70015,70104..70216,70294..70677,70813..70927,71004..72233,72328..>73704))	Acanthamoeba castellanii str. Neff	14919455
ACA1_393580	mRNA	ACA1_393580	NW_004457498.1	73707	74806	R	ACA1_393580	complement(join(<73707..73731,73863..73986,74271..74524,74748..>74806))	Acanthamoeba castellanii str. Neff	14919456
ACA1_393590	mRNA	ACA1_393590	NW_004457498.1	75308	77257	R	ACA1_393590	complement(join(<75308..75466,75558..75624,75708..75781,75858..75960,76206..76520,76609..76790,76892..77062,77183..>77257))	Acanthamoeba castellanii str. Neff	14919457
ACA1_393700	mRNA	ACA1_393700	NW_004457498.1	78454	81690	D	ACA1_393700	join(<78454..78879,78951..79059,79135..79208,79273..79381,79486..79619,79704..79827,79911..80021,80099..80209,80284..80376,80477..80677,80791..80905,81101..81194,81299..81451,81532..>81690)	Acanthamoeba castellanii str. Neff	14919458
ACA1_393910	mRNA	ACA1_393910	NW_004457498.1	82755	83895	D	ACA1_393910	join(<82755..82824,82928..>83895)	Acanthamoeba castellanii str. Neff	14919459
ACA1_393920	mRNA	ACA1_393920	NW_004457498.1	84011	86718	R	ACA1_393920	complement(join(<84011..84250,84417..84917,85112..85180,85642..85870,86065..86081,86333..86418,86475..>86718))	Acanthamoeba castellanii str. Neff	14919460
ACA1_394030	mRNA	ACA1_394030	NW_004457498.1	87165	87923	R	ACA1_394030	complement(join(<87165..87388,87485..87600,87697..>87923))	Acanthamoeba castellanii str. Neff	14919461
ACA1_394140	mRNA	ACA1_394140	NW_004457498.1	90001	90761	R	ACA1_394140	complement(join(<90001..90137,90230..90505,90605..>90761))	Acanthamoeba castellanii str. Neff	14919462
ACA1_394150	mRNA	ACA1_394150	NW_004457498.1	91064	94255	R	ACA1_394150	complement(join(<91064..91167,91236..91417,91522..91795,91877..92041,92106..92182,92259..92335,92443..92806,92936..93047,93123..93175,93254..93346,93426..93478,93551..93730,93893..94018,94118..>94255))	Acanthamoeba castellanii str. Neff	14919463
ACA1_394260	mRNA	ACA1_394260	NW_004457498.1	96027	96514	R	ACA1_394260	complement(join(<96027..96146,96250..96350,96445..>96514))	Acanthamoeba castellanii str. Neff	14919464
ACA1_394270	mRNA	ACA1_394270	NW_004457498.1	96900	98795	D	ACA1_394270	join(<96900..96957,97017..97076,97332..97434,97502..97701,97774..97887,97961..98051,98126..98224,98280..98566,98644..>98795)	Acanthamoeba castellanii str. Neff	14919465
ACA1_394280	mRNA	ACA1_394280	NW_004457498.1	99188	100047	D	ACA1_394280	join(<99188..99531,99617..99732,99824..>100047)	Acanthamoeba castellanii str. Neff	14919466
ACA1_394290	mRNA	ACA1_394290	NW_004457498.1	100194	101063	R	ACA1_394290	complement(join(<100194..100324,100430..>101063))	Acanthamoeba castellanii str. Neff	14919467
ACA1_394400	mRNA	ACA1_394400	NW_004457498.1	101630	103261	R	ACA1_394400	complement(join(<101630..101889,102025..102559,102631..102805,102932..103101,103175..>103261))	Acanthamoeba castellanii str. Neff	14919468
ACA1_394410	mRNA	ACA1_394410	NW_004457498.1	103837	103983	D	ACA1_394410	<103837..>103983	Acanthamoeba castellanii str. Neff	14919469
ACA1_394520	mRNA	ACA1_394520	NW_004457498.1	107080	108295	D	ACA1_394520	join(<107080..107287,107352..107434,107465..107590,107746..107877,108050..>108295)	Acanthamoeba castellanii str. Neff	14919470
ACA1_394530	mRNA	ACA1_394530	NW_004457498.1	108518	108870	D	ACA1_394530	join(<108518..108571,108628..>108870)	Acanthamoeba castellanii str. Neff	14919471
ACA1_394540	mRNA	ACA1_394540	NW_004457498.1	108878	109375	D	ACA1_394540	join(<108878..108925,108977..>109375)	Acanthamoeba castellanii str. Neff	14919472
ACA1_394560	mRNA	ACA1_394560	NW_004457498.1	110229	110814	D	ACA1_394560	join(<110229..110289,110354..>110814)	Acanthamoeba castellanii str. Neff	14919474
ACA1_394570	mRNA	ACA1_394570	NW_004457498.1	110892	111491	R	ACA1_394570	complement(join(<110892..111035,111112..111237,111306..>111491))	Acanthamoeba castellanii str. Neff	14919475
ACA1_394580	mRNA	ACA1_394580	NW_004457498.1	112774	113612	D	ACA1_394580	join(<112774..112929,113009..113161,113208..>113612)	Acanthamoeba castellanii str. Neff	14919476
ACA1_394590	mRNA	ACA1_394590	NW_004457498.1	114666	115545	D	ACA1_394590	join(<114666..114912,114983..>115545)	Acanthamoeba castellanii str. Neff	14919477
ACA1_394600	mRNA	ACA1_394600	NW_004457498.1	115590	121597	R	ACA1_394600	complement(join(<115590..115604,115710..115854,115986..116140,116231..116549,116642..116809,116892..117156,117237..117327,117411..117975,118148..118224,118322..118393,118521..119657,119831..119925,120040..120124,120234..120373,120470..121075,121177..121279,121370..>121597))	Acanthamoeba castellanii str. Neff	14919478
ACA1_394610	mRNA	ACA1_394610	NW_004457498.1	121781	123502	D	ACA1_394610	join(<121781..121869,121946..122005,122084..122168,122246..122319,122399..122512,122592..122661,122718..122819,122913..123149,123242..>123502)	Acanthamoeba castellanii str. Neff	14919485
ACA1_394620	mRNA	ACA1_394620	NW_004457498.1	123564	129268	R	ACA1_394620	complement(join(<123564..123699,124027..124255,124360..125172,125292..125370,125443..125521,125605..125665,125734..125860,125925..126012,126103..126178,126267..126421,126518..126570,126638..126712,126786..126853,126913..127382,127456..127808,127889..127964,128025..128080,128156..128361,128421..128544,128611..128702,128772..128862,128937..129065,129263..>129268))	Acanthamoeba castellanii str. Neff	14919486
ACA1_394730	mRNA	ACA1_394730	NW_004457498.1	130500	131344	R	ACA1_394730	complement(join(<130500..130583,130691..130776,130858..130945,131037..131130,131193..>131344))	Acanthamoeba castellanii str. Neff	14919487
ACA1_394740	mRNA	ACA1_394740	NW_004457498.1	131403	132624	R	ACA1_394740	complement(join(<131403..131670,131738..131860,132097..132164,132231..132306,132506..>132624))	Acanthamoeba castellanii str. Neff	14919488
ACA1_394750	mRNA	ACA1_394750	NW_004457498.1	132730	137990	R	ACA1_394750	complement(join(<132730..132867,135514..135585,135685..135738,135805..135939,136061..136183,136280..136517,136640..136759,136833..136927,137044..137128,137236..137507,137605..137690,137790..137841,137931..>137990))	Acanthamoeba castellanii str. Neff	14919489
ACA1_394860	mRNA	ACA1_394860	NW_004457498.1	138676	141563	D	ACA1_394860	join(<138676..138745,138832..138890,138968..139129,139201..139317,139396..139507,139608..139775,139913..140017,140091..140162,140302..140342,140475..140559,140645..140832,140946..141041,141129..141344,141420..>141563)	Acanthamoeba castellanii str. Neff	14919490
ACA1_394970	mRNA	ACA1_394970	NW_004457498.1	145235	147105	D	ACA1_394970	join(<145235..145287,145518..145628,145716..145812,145959..146882,147064..>147105)	Acanthamoeba castellanii str. Neff	14919491
ACA1_395180	mRNA	ACA1_395180	NW_004457498.1	148370	150057	D	ACA1_395180	join(<148370..148585,148659..148850,148938..149071,149153..149244,149326..149402,149483..149546,149634..149710,149815..>150057)	Acanthamoeba castellanii str. Neff	14919492
ACA1_395190	mRNA	ACA1_395190	NW_004457498.1	151915	153686	D	ACA1_395190	join(<151915..152105,152196..152309,152333..152381,152427..152723,152937..152976,153050..153177,153247..153319,153389..153444,153600..>153686)	Acanthamoeba castellanii str. Neff	14919493
ACA1_395200	mRNA	ACA1_395200	NW_004457498.1	154164	154578	D	ACA1_395200	join(<154164..154230,154292..>154578)	Acanthamoeba castellanii str. Neff	14919494
ACA1_395210	mRNA	ACA1_395210	NW_004457498.1	154773	156907	R	ACA1_395210	complement(join(<154773..154928,155015..155157,155250..155360,155473..155650,155810..155873,155954..156052,156136..156206,156287..156373,156526..156582,156653..156746,156822..>156907))	Acanthamoeba castellanii str. Neff	14919495
ACA1_395220	mRNA	ACA1_395220	NW_004457498.1	157003	158093	D	ACA1_395220	join(<157003..157296,157401..157505,157585..157662,157758..157894,157979..>158093)	Acanthamoeba castellanii str. Neff	14919496
ACA1_395230	mRNA	ACA1_395230	NW_004457498.1	159112	162302	D	ACA1_395230	join(<159112..159323,159713..159945,160029..160156,160251..160473,160555..162169,162269..>162302)	Acanthamoeba castellanii str. Neff	14919497
ACA1_395240	mRNA	ACA1_395240	NW_004457498.1	162781	163339	R	ACA1_395240	complement(join(<162781..162891,162977..>163339))	Acanthamoeba castellanii str. Neff	14919498
ACA1_395250	mRNA	ACA1_395250	NW_004457498.1	163482	164241	D	ACA1_395250	join(<163482..163562,163663..163752,163831..163984,164171..>164241)	Acanthamoeba castellanii str. Neff	14919499
ACA1_395260	mRNA	ACA1_395260	NW_004457498.1	164328	165582	R	ACA1_395260	complement(join(<164328..164456,164553..164765,164847..164900,165220..>165582))	Acanthamoeba castellanii str. Neff	14919500
ACA1_395370	mRNA	ACA1_395370	NW_004457498.1	165680	166043	D	ACA1_395370	join(<165680..165799,165900..>166043)	Acanthamoeba castellanii str. Neff	14919501
ACA1_395380	mRNA	ACA1_395380	NW_004457498.1	166316	167235	D	ACA1_395380	join(<166316..166405,166493..166696,166777..>167235)	Acanthamoeba castellanii str. Neff	14919502
ACA1_395390	mRNA	ACA1_395390	NW_004457498.1	167281	167787	R	ACA1_395390	complement(join(<167281..167514,167532..167580,167684..>167787))	Acanthamoeba castellanii str. Neff	14919503
ACA1_395410	mRNA	ACA1_395410	NW_004457498.1	170598	172685	R	ACA1_395410	complement(join(<170598..170766,170928..170977,171102..171215,171253..171366,171512..171665,171806..171948,172037..172095,172177..172306,172322..172373,172540..>172685))	Acanthamoeba castellanii str. Neff	14919505
ACA1_395420	mRNA	ACA1_395420	NW_004457498.1	173029	173452	R	ACA1_395420	complement(join(<173029..173196,173279..>173452))	Acanthamoeba castellanii str. Neff	14919506
ACA1_395460	mRNA	ACA1_395460	NW_004457498.1	182302	183882	D	ACA1_395460	join(<182302..182801,182912..183020,183122..183322,183391..>183882)	Acanthamoeba castellanii str. Neff	14919510
ACA1_395470	mRNA	ACA1_395470	NW_004457498.1	184052	186653	D	ACA1_395470	join(<184052..184200,184325..185431,185519..185630,185778..185972,186060..>186653)	Acanthamoeba castellanii str. Neff	14919511
ACA1_395480	mRNA	ACA1_395480	NW_004457498.1	186794	191692	R	ACA1_395480	complement(join(<186794..186892,186976..187268,187283..187625,187707..187766,187850..188011,188113..188241,188333..188370,188447..188514,188623..188708,188785..188874,188979..189065,189240..189320,189406..189470,189563..189615,189727..189808,189880..190001,190093..190239,190267..190390,190497..190599,190688..190775,190870..190928,190998..191135,191232..191302,191382..191416,191529..>191692))	Acanthamoeba castellanii str. Neff	14919512
ACA1_395490	mRNA	ACA1_395490	NW_004457498.1	192873	193808	D	ACA1_395490	join(<192873..193152,193281..193388,193480..>193808)	Acanthamoeba castellanii str. Neff	14919513
ACA1_395500	mRNA	ACA1_395500	NW_004457498.1	194368	195860	R	ACA1_395500	complement(join(<194368..194703,194777..194895,194995..195064,195178..195233,195322..195399,195499..195595,195681..195748,195845..>195860))	Acanthamoeba castellanii str. Neff	14919514
ACA1_395510	mRNA	ACA1_395510	NW_004457498.1	196053	196672	D	ACA1_395510	join(<196053..196262,196348..196407,196559..>196672)	Acanthamoeba castellanii str. Neff	14919515
ACA1_395520	mRNA	ACA1_395520	NW_004457498.1	197038	198863	D	ACA1_395520	join(<197038..197120,197379..197452,197580..197622,197848..198034,198260..198347,198472..198723,198784..>198863)	Acanthamoeba castellanii str. Neff	14919516
ACA1_395530	mRNA	ACA1_395530	NW_004457498.1	200028	202218	R	ACA1_395530	complement(join(<200028..200081,200111..200485,200583..200783,200866..200977,201073..201187,201236..201491,201504..201830,201906..202044,202133..>202218))	Acanthamoeba castellanii str. Neff	14919517
ACA1_395540	mRNA	ACA1_395540	NW_004457498.1	202518	204389	R	ACA1_395540	complement(join(<202518..202997,203087..203287,203395..203503,203614..203753,203769..204056,204069..>204389))	Acanthamoeba castellanii str. Neff	14919518
ACA1_395550	mRNA	ACA1_395550	NW_004457498.1	204949	207215	R	ACA1_395550	complement(join(<204949..205503,205590..205793,205874..205985,206119..206585,206598..>207215))	Acanthamoeba castellanii str. Neff	14919519
ACA1_298630	mRNA	ACA1_298630	NW_004457496.1	1257	6322	R	ACA1_298630	complement(join(<1257..1310,1393..1491,1626..1727,1884..1994,2040..2046,2067..2242,2326..2403,2524..2726,2838..2946,3046..3177,3287..3419,3544..3671,3762..3855,3952..4060,4168..4324,4416..4522,4648..4723,4863..4993,5130..5235,5347..5428,5590..5660,5756..5862,5963..6045,6192..>6322))	Acanthamoeba castellanii str. Neff	14919423
ACA1_298640	mRNA	ACA1_298640	NW_004457496.1	7058	9092	D	ACA1_298640	join(<7058..7385,7551..7645,7777..7868,7974..8069,8163..8231,8309..8401,8499..8592,8698..8788,8866..>9092)	Acanthamoeba castellanii str. Neff	14919432
ACA1_298650	mRNA	ACA1_298650	NW_004457496.1	9394	12759	D	ACA1_298650	join(<9394..9546,9652..9893,10019..10175,10272..10347,10472..10581,10682..10923,11142..11284,11411..11642,11776..11902,12041..12188,12278..12456,12493..>12759)	Acanthamoeba castellanii str. Neff	14919424
ACA1_298660	mRNA	ACA1_298660	NW_004457496.1	13186	18158	D	ACA1_298660	join(<13186..13238,13361..13419,13552..13704,13942..14119,14215..14321,14413..14804,14891..14957,15027..15906,16012..16141,16269..16355,16479..17447,17652..>18158)	Acanthamoeba castellanii str. Neff	14919425
ACA1_298670	mRNA	ACA1_298670	NW_004457496.1	18220	21447	R	ACA1_298670	complement(join(<18220..18535,18701..18794,18985..19082,19213..19352,19499..19607,19761..19876,20004..20396,20508..20581,20683..20774,20887..21080,21192..21270,21356..>21447))	Acanthamoeba castellanii str. Neff	14919426
ACA1_298780	mRNA	ACA1_298780	NW_004457496.1	22392	24148	D	ACA1_298780	join(<22392..22619,22728..22797,22880..23283,23437..23543,23664..23912,23989..>24148)	Acanthamoeba castellanii str. Neff	14919427
ACA1_298790	mRNA	ACA1_298790	NW_004457496.1	24390	28708	D	ACA1_298790	join(<24390..24743,24844..24921,25021..25159,25292..25367,25436..25547,25606..25762,25894..26060,26182..26363,26473..26689,26764..26944,27061..27288,27403..27455,27551..27695,27794..28060,28168..28479,28587..>28708)	Acanthamoeba castellanii str. Neff	14919428
ACA1_298800	mRNA	ACA1_298800	NW_004457496.1	28875	32784	R	ACA1_298800	complement(join(<28875..28994,29065..29439,29539..29623,29708..29845,29962..30131,30247..30342,30458..30553,30664..30816,30917..30969,31067..31309,31426..31504,31636..31707,31820..31913,32064..32382,32414..32606,32707..>32784))	Acanthamoeba castellanii str. Neff	14919429
ACA1_298810	mRNA	ACA1_298810	NW_004457496.1	33229	34755	R	ACA1_298810	complement(join(<33229..33344,33448..33702,33836..33926,34013..34138,34209..34362,34459..34565,34651..>34755))	Acanthamoeba castellanii str. Neff	14919430
ACA1_298820	mRNA	ACA1_298820	NW_004457496.1	35154	36197	D	ACA1_298820	join(<35154..35229,35467..>36197)	Acanthamoeba castellanii str. Neff	14919431
ACA1_298830	mRNA	ACA1_298830	NW_004457496.1	36316	38195	D	ACA1_298830	join(<36316..36992,37023..37107,37168..38034,38046..>38195)	Acanthamoeba castellanii str. Neff	14919419
ACA1_298840	mRNA	ACA1_298840	NW_004457496.1	38635	39473	R	ACA1_298840	complement(join(<38635..38766,38972..39081,39176..>39473))	Acanthamoeba castellanii str. Neff	14919420
ACA1_298850	mRNA	ACA1_298850	NW_004457496.1	39847	42647	D	ACA1_298850	join(<39847..40263,40372..40560,40692..40874,40986..41498,41589..41957,42041..42121,42207..>42647)	Acanthamoeba castellanii str. Neff	14919421
ACA1_298860	mRNA	ACA1_298860	NW_004457496.1	42810	46079	R	ACA1_298860	complement(join(<42810..43187,43325..43364,43382..43432,43506..43760,43901..44001,44149..44245,44339..44532,44702..44856,44969..45069,45160..45449,45576..45743,45818..45893,45970..>46079))	Acanthamoeba castellanii str. Neff	14919422
ACA1_313850	mRNA	ACA1_313850	NW_004457493.1	43	1378	D	ACA1_313850	join(<43..408,483..639,708..964,1036..1187,1276..>1378)	Acanthamoeba castellanii str. Neff	14919413
ACA1_313860	mRNA	ACA1_313860	NW_004457493.1	1619	4965	R	ACA1_313860	complement(join(<1619..1919,1999..2108,2203..2645,2715..2976,3028..3082,3243..3363,3472..3562,3694..3887,3976..4053,4140..>4965))	Acanthamoeba castellanii str. Neff	14919415
ACA1_313870	mRNA	ACA1_313870	NW_004457493.1	5431	7418	R	ACA1_313870	complement(join(<5431..5653,5724..5824,5903..6022,6093..6215,6285..6347,6394..6609,6680..6831,6874..6943,7099..7299,7413..>7418))	Acanthamoeba castellanii str. Neff	14919417
ACA1_313890	mRNA	ACA1_313890	NW_004457493.1	10259	10732	D	ACA1_313890	<10259..>10732	Acanthamoeba castellanii str. Neff	14919418
ACA1_313900	mRNA	ACA1_313900	NW_004457493.1	10821	14425	D	ACA1_313900	join(<10821..10943,11005..11077,11161..11276,11370..11468,11571..11698,11751..11822,11907..12043,12132..12236,12311..12386,12479..12569,12643..12756,12828..12959,13037..13195,13285..13386,13472..13637,13721..13848,13928..14068,14157..14276,14363..>14425)	Acanthamoeba castellanii str. Neff	14919414
ACA1_153830	mRNA	ACA1_153830	NW_004457490.1	22	2169	R	ACA1_153830	complement(join(<22..77,190..300,416..492,578..640,737..795,878..962,1068..1166,1934..>2169))	Acanthamoeba castellanii str. Neff	14919409
ACA1_153940	mRNA	ACA1_153940	NW_004457490.1	5135	5563	R	ACA1_153940	complement(join(<5135..5308,5324..>5563))	Acanthamoeba castellanii str. Neff	14919412
ACA1_153950	mRNA	ACA1_153950	NW_004457490.1	6816	10799	R	ACA1_153950	complement(join(<6816..6897,6990..7071,7259..7441,7527..7580,7661..7775,7901..8001,8081..8323,8443..8538,8615..8686,8783..8927,9020..9150,9218..9273,9356..9447,10581..>10799))	Acanthamoeba castellanii str. Neff	14919410
ACA1_154060	mRNA	ACA1_154060	NW_004457490.1	12479	14708	R	ACA1_154060	complement(join(<12479..12694,12806..12871,12984..13065,13175..13312,13414..13502,13635..13757,13883..14041,14193..14267,14403..14504,14676..>14708))	Acanthamoeba castellanii str. Neff	14919411
ACA1_154170	mRNA	ACA1_154170	NW_004457490.1	15712	17361	D	ACA1_154170	join(<15712..16003,16091..16171,16270..16402,16534..16652,16721..16808,16933..17022,17105..17184,17267..>17361)	Acanthamoeba castellanii str. Neff	14919351
ACA1_154180	mRNA	ACA1_154180	NW_004457490.1	17592	18478	D	ACA1_154180	join(<17592..18071,18215..>18478)	Acanthamoeba castellanii str. Neff	14919352
ACA1_154190	mRNA	ACA1_154190	NW_004457490.1	18522	19490	R	ACA1_154190	complement(join(<18522..18654,18715..18865,18980..19211,19320..>19490))	Acanthamoeba castellanii str. Neff	14919403
ACA1_154200	mRNA	ACA1_154200	NW_004457490.1	19751	23334	R	ACA1_154200	complement(join(<19751..19917,20006..20188,20257..20425,20548..20651,20724..20792,20869..21030,21138..21233,21310..21381,21472..21616,21714..21844,21978..22131,22224..22387,22475..22576,22650..22748,22811..22879,22953..23031,23140..>23334))	Acanthamoeba castellanii str. Neff	14919404
ACA1_154210	mRNA	ACA1_154210	NW_004457490.1	23487	25636	R	ACA1_154210	complement(join(<23487..23654,23751..23845,23903..24002,24143..24251,24325..24429,24492..24568,24644..24699,24778..24928,25037..25131,25213..25331,25611..>25636))	Acanthamoeba castellanii str. Neff	14919405
ACA1_154220	mRNA	ACA1_154220	NW_004457490.1	25799	27284	D	ACA1_154220	join(<25799..25901,26019..26343,26423..26552,26625..26764,26882..>27284)	Acanthamoeba castellanii str. Neff	14919406
ACA1_154230	mRNA	ACA1_154230	NW_004457490.1	27779	28705	D	ACA1_154230	join(<27779..27824,27949..28044,28122..28173,28268..28525,28654..>28705)	Acanthamoeba castellanii str. Neff	14919407
ACA1_154240	mRNA	ACA1_154240	NW_004457490.1	28897	31403	R	ACA1_154240	complement(join(<28897..28966,29060..29155,29274..29329,29378..29443,29527..29660,29764..29860,29949..30005,30075..30261,30393..30502,30599..30739,30871..30922,31051..31109,31194..>31403))	Acanthamoeba castellanii str. Neff	14919408
ACA1_154250	mRNA	ACA1_154250	NW_004457490.1	31771	33583	D	ACA1_154250	join(<31771..31906,32000..32569,32682..32810,32910..33078,33158..33315,33414..>33583)	Acanthamoeba castellanii str. Neff	14919353
ACA1_154260	mRNA	ACA1_154260	NW_004457490.1	34658	35034	D	ACA1_154260	join(<34658..34818,34920..>35034)	Acanthamoeba castellanii str. Neff	14919354
ACA1_154270	mRNA	ACA1_154270	NW_004457490.1	36638	37292	D	ACA1_154270	join(<36638..36668,36982..37110,37213..>37292)	Acanthamoeba castellanii str. Neff	14919355
ACA1_154290	mRNA	ACA1_154290	NW_004457490.1	39907	44536	R	ACA1_154290	complement(join(<39907..40004,40100..40206,40385..40485,40571..40659,40793..40904,40997..41081,41208..41299,43331..43431,43532..43601,43700..43876,43894..44062,44086..44196,44430..>44536))	Acanthamoeba castellanii str. Neff	14919357
ACA1_154400	mRNA	ACA1_154400	NW_004457490.1	44596	49849	R	ACA1_154400	complement(join(<44596..44774,44859..45133,45223..46348,46446..46795,46823..46871,46950..47869,47932..48104,48198..48349,48408..48635,48743..48881,48963..49080,49163..49364,49502..49530,49620..>49849))	Acanthamoeba castellanii str. Neff	14919358
ACA1_154410	mRNA	ACA1_154410	NW_004457490.1	50309	52471	D	ACA1_154410	join(<50309..50771,50829..50939,50999..51116,51179..51273,51347..51374,51450..51556,51673..51730,51772..51901,52005..52218,52287..>52471)	Acanthamoeba castellanii str. Neff	14919359
ACA1_154540	mRNA	ACA1_154540	NW_004457490.1	61535	63482	R	ACA1_154540	complement(join(<61535..61636,61765..61885,62122..62206,62306..62362,62417..62495,62574..62660,62729..62854,62915..63039,63120..63186,63263..63370,63432..>63482))	Acanthamoeba castellanii str. Neff	14919362
ACA1_154550	mRNA	ACA1_154550	NW_004457490.1	63728	66582	D	ACA1_154550	join(<63728..63848,63924..63979,64072..64266,64293..64358,64454..64577,64675..64790,64889..64999,65086..65233,65329..65438,65526..65721,65814..65917,65952..66068,66254..66370,66457..>66582)	Acanthamoeba castellanii str. Neff	14919363
ACA1_154560	mRNA	ACA1_154560	NW_004457490.1	67461	68182	D	ACA1_154560	join(<67461..67979,68156..>68182)	Acanthamoeba castellanii str. Neff	14919364
ACA1_154670	mRNA	ACA1_154670	NW_004457490.1	68935	72938	D	ACA1_154670	join(<68935..69619,69707..69857,69970..70053,70137..70536,70631..71183,71252..71391,71462..71616,71707..72028,72080..72152,72244..72382,72479..72650,72738..>72938)	Acanthamoeba castellanii str. Neff	14919365
ACA1_154680	mRNA	ACA1_154680	NW_004457490.1	72980	77569	D	ACA1_154680	join(<72980..73152,73228..73316,73397..73662,73736..73840,73940..74000,74136..74458,74529..75113,75275..75393,75472..75755,75875..76011,76086..76142,76363..77380,77478..>77569)	Acanthamoeba castellanii str. Neff	14919366
ACA1_154690	mRNA	ACA1_154690	NW_004457490.1	77658	80210	D	ACA1_154690	join(<77658..77713,77807..78020,78121..78274,78373..78498,78652..78734,78928..79019,79034..79079,79209..79371,79450..79531,79673..79758,79864..80023,80159..>80210)	Acanthamoeba castellanii str. Neff	14919367
ACA1_154700	mRNA	ACA1_154700	NW_004457490.1	80299	80646	R	ACA1_154700	complement(<80299..>80646)	Acanthamoeba castellanii str. Neff	14919368
ACA1_154710	mRNA	ACA1_154710	NW_004457490.1	80782	86899	R	ACA1_154710	complement(join(<80782..80916,81005..81102,81183..81456,81562..81631,81750..81874,81981..82111,82205..82463,82572..82711,82818..83058,83265..83312,83386..83508,83584..83655,83775..83846,83949..84033,84121..84246,84357..84478,84663..84750,84823..84944,85031..85077,85145..85232,85336..85500,85582..85671,85756..85917,86031..86107,86338..86389,86467..86711,86803..>86899))	Acanthamoeba castellanii str. Neff	14919383
ACA1_154720	mRNA	ACA1_154720	NW_004457490.1	88699	89818	D	ACA1_154720	join(<88699..89080,89092..89159,89273..89600,89682..>89818)	Acanthamoeba castellanii str. Neff	14919384
ACA1_154730	mRNA	ACA1_154730	NW_004457490.1	90023	91859	D	ACA1_154730	join(<90023..90479,90591..90693,90789..90865,90988..91129,91221..91295,91387..91444,91528..91600,91795..>91859)	Acanthamoeba castellanii str. Neff	14919385
ACA1_154840	mRNA	ACA1_154840	NW_004457490.1	93085	94563	D	ACA1_154840	join(<93085..93274,93651..93713,93837..93905,94023..94082,94160..>94563)	Acanthamoeba castellanii str. Neff	14919386
ACA1_154950	mRNA	ACA1_154950	NW_004457490.1	94859	96223	D	ACA1_154950	join(<94859..95101,95170..95690,95796..96153,96218..>96223)	Acanthamoeba castellanii str. Neff	14919387
ACA1_155060	mRNA	ACA1_155060	NW_004457490.1	96831	98579	D	ACA1_155060	join(<96831..96850,97143..97492,97565..97704,97792..97943,98048..>98579)	Acanthamoeba castellanii str. Neff	14919388
ACA1_155070	mRNA	ACA1_155070	NW_004457490.1	98871	99858	D	ACA1_155070	join(<98871..99039,99158..>99858)	Acanthamoeba castellanii str. Neff	14919389
ACA1_155080	mRNA	ACA1_155080	NW_004457490.1	99964	101692	R	ACA1_155080	complement(join(<99964..100815,100847..>101692))	Acanthamoeba castellanii str. Neff	14919390
ACA1_155090	mRNA	ACA1_155090	NW_004457490.1	101978	104361	R	ACA1_155090	complement(join(<101978..102064,102199..102389,102483..102553,102691..102794,102926..103036,103081..103201,103288..103399,103510..103718,103808..103929,104019..104066,104144..104209,104320..>104361))	Acanthamoeba castellanii str. Neff	14919391
ACA1_155100	mRNA	ACA1_155100	NW_004457490.1	104599	105629	D	ACA1_155100	join(<104599..104769,105217..105294,105351..105404,105534..>105629)	Acanthamoeba castellanii str. Neff	14919392
ACA1_155110	mRNA	ACA1_155110	NW_004457490.1	106063	107524	R	ACA1_155110	complement(join(<106063..106123,106207..106366,106456..106621,106714..106838,106963..>107524))	Acanthamoeba castellanii str. Neff	14919393
ACA1_155120	mRNA	ACA1_155120	NW_004457490.1	108185	109426	R	ACA1_155120	complement(join(<108185..108263,108358..108450,108558..108635,108728..108825,108899..109070,109083..109159,109231..109354,109383..>109426))	Acanthamoeba castellanii str. Neff	14919394
ACA1_155130	mRNA	ACA1_155130	NW_004457490.1	110430	116207	D	ACA1_155130	join(<110430..110507,110607..110690,110772..111073,111189..111308,111417..111599,111749..112143,112239..112304,112442..112884,112974..113075,113178..113282,113369..113458,113545..113706,113783..113907,113992..114056,114128..114213,114333..114416,114581..114722,114851..114927,114998..115123,115205..115345,115415..115552,115688..115825,115902..115988,116106..>116207)	Acanthamoeba castellanii str. Neff	14919395
ACA1_155140	mRNA	ACA1_155140	NW_004457490.1	116325	117258	D	ACA1_155140	join(<116325..116522,116638..116803,116941..117060,117149..>117258)	Acanthamoeba castellanii str. Neff	14919396
ACA1_155150	mRNA	ACA1_155150	NW_004457490.1	117218	117627	R	ACA1_155150	complement(join(<117218..117461,117575..>117627))	Acanthamoeba castellanii str. Neff	14919397
ACA1_155160	mRNA	ACA1_155160	NW_004457490.1	117818	118596	D	ACA1_155160	join(<117818..118088,118238..>118596)	Acanthamoeba castellanii str. Neff	14919398
ACA1_155170	mRNA	ACA1_155170	NW_004457490.1	118796	119617	D	ACA1_155170	join(<118796..118975,119060..119120,119280..119371,119456..>119617)	Acanthamoeba castellanii str. Neff	14919399
ACA1_155180	mRNA	ACA1_155180	NW_004457490.1	119761	120296	D	ACA1_155180	join(<119761..119875,119953..120138,120256..>120296)	Acanthamoeba castellanii str. Neff	14919400
ACA1_155190	mRNA	ACA1_155190	NW_004457490.1	120392	121739	R	ACA1_155190	complement(join(<120392..120553,120584..120747,120861..121128,121270..121399,121483..121586,121689..>121739))	Acanthamoeba castellanii str. Neff	14919401
ACA1_155200	mRNA	ACA1_155200	NW_004457490.1	122001	123031	R	ACA1_155200	complement(join(<122001..122662,122698..122821,122870..>123031))	Acanthamoeba castellanii str. Neff	14919402
ACA1_155210	mRNA	ACA1_155210	NW_004457490.1	124548	126594	R	ACA1_155210	complement(join(<124548..124653,124774..125078,125161..125222,125321..125494,125612..125747,125851..125910,126061..126408,126502..>126594))	Acanthamoeba castellanii str. Neff	14919313
ACA1_155220	mRNA	ACA1_155220	NW_004457490.1	126833	128118	D	ACA1_155220	join(<126833..127021,127098..127174,127262..127369,127441..127592,127665..127830,127903..128035,128110..>128118)	Acanthamoeba castellanii str. Neff	14919314
ACA1_155230	mRNA	ACA1_155230	NW_004457490.1	128364	130857	D	ACA1_155230	join(<128364..128672,128917..129006,129091..129225,129345..129480,129516..129659,129739..129911,130005..130060,130139..130234,130319..130424,130570..130691,130752..>130857)	Acanthamoeba castellanii str. Neff	14919315
ACA1_155240	mRNA	ACA1_155240	NW_004457490.1	130935	132656	R	ACA1_155240	complement(join(<130935..131051,131149..131252,131329..131391,131491..131568,131671..131752,131878..131962,132037..132088,132183..132309,132395..132476,132556..>132656))	Acanthamoeba castellanii str. Neff	14919316
ACA1_155260	mRNA	ACA1_155260	NW_004457490.1	134078	135783	R	ACA1_155260	complement(join(<134078..134626,134756..134898,134996..135079,135173..135621,135704..>135783))	Acanthamoeba castellanii str. Neff	14919318
ACA1_155270	mRNA	ACA1_155270	NW_004457490.1	136295	137780	D	ACA1_155270	join(<136295..136505,136576..136751,136844..136994,137125..137531,137598..>137780)	Acanthamoeba castellanii str. Neff	14919319
ACA1_155280	mRNA	ACA1_155280	NW_004457490.1	139006	140425	R	ACA1_155280	complement(join(<139006..139151,139277..139550,139609..139871,139978..140092,140246..>140425))	Acanthamoeba castellanii str. Neff	14919320
ACA1_155290	mRNA	ACA1_155290	NW_004457490.1	140817	141373	R	ACA1_155290	complement(join(<140817..140947,140968..>141373))	Acanthamoeba castellanii str. Neff	14919321
ACA1_155300	mRNA	ACA1_155300	NW_004457490.1	142877	144011	R	ACA1_155300	complement(join(<142877..143086,143181..143388,143499..143552,143659..143782,143861..>144011))	Acanthamoeba castellanii str. Neff	14919322
ACA1_155310	mRNA	ACA1_155310	NW_004457490.1	144145	145883	R	ACA1_155310	complement(join(<144145..144274,144556..144799,144876..145003,145287..145497,145589..>145883))	Acanthamoeba castellanii str. Neff	14919323
ACA1_155420	mRNA	ACA1_155420	NW_004457490.1	146128	148115	D	ACA1_155420	join(<146128..146172,146353..146465,146595..146680,146848..146934,147061..147209,147304..147397,147524..147617,147688..147738,147753..147779,147869..147947,148026..>148115)	Acanthamoeba castellanii str. Neff	14919324
ACA1_155430	mRNA	ACA1_155430	NW_004457490.1	148224	150025	D	ACA1_155430	join(<148224..148250,148359..148413,148536..148699,148823..149365,149470..149559,149639..149864,149889..>150025)	Acanthamoeba castellanii str. Neff	14919325
ACA1_155440	mRNA	ACA1_155440	NW_004457490.1	150093	158123	R	ACA1_155440	complement(join(<150093..150281,150368..150573,150658..150859,150952..151071,151148..151273,151400..151603,151679..151894,151976..152124,152244..152486,152609..152921,152993..153111,153244..153352,153645..153773,153858..153972,154125..154305,154380..154464,154550..154714,154828..155130,155298..155381,155516..155629,155705..155770,155841..156161,156247..156400,156549..156953,157034..157406,157518..157641,157758..157832,158100..>158123))	Acanthamoeba castellanii str. Neff	14919326
ACA1_155450	mRNA	ACA1_155450	NW_004457490.1	158542	160990	R	ACA1_155450	complement(join(<158542..158822,158921..159229,159330..159731,159808..160435,160577..>160990))	Acanthamoeba castellanii str. Neff	14919327
ACA1_155460	mRNA	ACA1_155460	NW_004457490.1	162085	163218	R	ACA1_155460	complement(join(<162085..162267,162347..162605,162682..162818,162916..>163218))	Acanthamoeba castellanii str. Neff	14919328
ACA1_155470	mRNA	ACA1_155470	NW_004457490.1	163315	165362	R	ACA1_155470	complement(join(<163315..163461,163565..164011,164143..164363,164436..164626,164710..164879,164963..165157,165240..>165362))	Acanthamoeba castellanii str. Neff	14919329
ACA1_155480	mRNA	ACA1_155480	NW_004457490.1	166491	167226	R	ACA1_155480	complement(join(<166491..166682,166746..166808,166900..166977,167086..>167226))	Acanthamoeba castellanii str. Neff	14919330
ACA1_155490	mRNA	ACA1_155490	NW_004457490.1	168260	174195	D	ACA1_155490	join(<168260..168397,168617..168664,168787..169002,169146..169214,169401..169487,169574..169703,169799..169844,169954..170002,170042..170107,170144..170227,170419..170503,170541..170650,170752..170812,170879..170970,171073..171273,171474..171573,171690..171766,171867..171991,172081..172172,172257..172328,172400..172449,172465..172563,172657..172739,172896..173067,173186..173323,173406..173504,173643..173720,173803..>174195)	Acanthamoeba castellanii str. Neff	14919331
ACA1_155500	mRNA	ACA1_155500	NW_004457490.1	174284	177333	R	ACA1_155500	complement(join(<174284..174742,174858..174932,175266..175562,175677..175774,175878..176103,176240..176344,176389..176554,176677..176941,177041..177151,177324..>177333))	Acanthamoeba castellanii str. Neff	14919332
ACA1_155510	mRNA	ACA1_155510	NW_004457490.1	177761	178970	R	ACA1_155510	complement(join(<177761..178876,178965..>178970))	Acanthamoeba castellanii str. Neff	14919333
ACA1_155520	mRNA	ACA1_155520	NW_004457490.1	179241	180152	D	ACA1_155520	join(<179241..179342,179437..179662,179861..179983,180058..>180152)	Acanthamoeba castellanii str. Neff	14919334
ACA1_155530	mRNA	ACA1_155530	NW_004457490.1	180501	181591	D	ACA1_155530	join(<180501..180906,180975..>181591)	Acanthamoeba castellanii str. Neff	14919335
ACA1_155540	mRNA	ACA1_155540	NW_004457490.1	181651	182250	R	ACA1_155540	complement(<181651..>182250)	Acanthamoeba castellanii str. Neff	14919336
ACA1_155550	mRNA	ACA1_155550	NW_004457490.1	182937	184619	D	ACA1_155550	join(<182937..183052,183155..183257,183358..183455,183683..183848,183933..184089,184156..>184619)	Acanthamoeba castellanii str. Neff	14919337
ACA1_155560	mRNA	ACA1_155560	NW_004457490.1	184830	186822	R	ACA1_155560	complement(join(<184830..185112,185185..185350,185451..185562,185646..185789,185897..186009,186085..186202,186313..186444,186568..>186822))	Acanthamoeba castellanii str. Neff	14919338
ACA1_155570	mRNA	ACA1_155570	NW_004457490.1	188518	189478	R	ACA1_155570	complement(join(<188518..189145,189258..>189478))	Acanthamoeba castellanii str. Neff	14919339
ACA1_155580	mRNA	ACA1_155580	NW_004457490.1	190416	193355	D	ACA1_155580	join(<190416..190523,190593..191037,191131..191341,191456..191594,191688..191870,191941..192103,192176..192598,192715..>193355)	Acanthamoeba castellanii str. Neff	14919340
ACA1_155590	mRNA	ACA1_155590	NW_004457490.1	194423	195754	R	ACA1_155590	complement(join(<194423..194524,194604..194926,195062..195453,195512..195609,195695..>195754))	Acanthamoeba castellanii str. Neff	14919341
ACA1_155600	mRNA	ACA1_155600	NW_004457490.1	195941	197153	D	ACA1_155600	join(<195941..196105,196281..196346,196434..196564,196610..197000,197082..>197153)	Acanthamoeba castellanii str. Neff	14919342
ACA1_155610	mRNA	ACA1_155610	NW_004457490.1	197284	200125	D	ACA1_155610	join(<197284..197863,197943..198043,198120..198290,198369..198475,198697..199066,199158..199616,199699..199888,200013..>200125)	Acanthamoeba castellanii str. Neff	14919343
ACA1_155620	mRNA	ACA1_155620	NW_004457490.1	200602	201945	D	ACA1_155620	<200602..>201945	Acanthamoeba castellanii str. Neff	14919344
ACA1_155630	mRNA	ACA1_155630	NW_004457490.1	202091	204192	R	ACA1_155630	complement(join(<202091..202191,202261..202306,202376..202490,202572..202633,202733..202829,202919..203047,203133..203242,203373..203548,203857..204000,204105..>204192))	Acanthamoeba castellanii str. Neff	14919345
ACA1_155640	mRNA	ACA1_155640	NW_004457490.1	204346	207426	R	ACA1_155640	complement(join(<204346..205363,205552..205693,205774..205923,206029..206150,206187..206305,206421..206577,206681..206730,206806..206918,207050..207151,207270..>207426))	Acanthamoeba castellanii str. Neff	14919346
ACA1_155650	mRNA	ACA1_155650	NW_004457490.1	207478	208907	R	ACA1_155650	complement(join(<207478..207696,207809..208110,208200..208582,208687..>208907))	Acanthamoeba castellanii str. Neff	14919347
ACA1_155660	mRNA	ACA1_155660	NW_004457490.1	209470	211169	D	ACA1_155660	join(<209470..209610,209775..209862,210161..210204,210282..210441,210528..210653,210751..211011,211102..>211169)	Acanthamoeba castellanii str. Neff	14919348
ACA1_155670	mRNA	ACA1_155670	NW_004457490.1	211603	213258	D	ACA1_155670	join(<211603..211866,211978..212071,212178..212265,212358..212467,212577..212658,212739..212842,212957..213053,213147..>213258)	Acanthamoeba castellanii str. Neff	14919349
ACA1_155680	mRNA	ACA1_155680	NW_004457490.1	213424	214090	R	ACA1_155680	complement(join(<213424..213526,213652..213959,214022..>214090))	Acanthamoeba castellanii str. Neff	14919350
ACA1_155690	mRNA	ACA1_155690	NW_004457490.1	214648	216522	D	ACA1_155690	<214648..>216522	Acanthamoeba castellanii str. Neff	14919369
ACA1_155700	mRNA	ACA1_155700	NW_004457490.1	216665	221607	R	ACA1_155700	complement(join(<216665..216739,216815..217241,217331..217554,217637..217767,217876..217978,218051..218330,218426..218966,219048..219294,219362..219478,219568..220233,220309..220542,220641..220877,221016..221338,221408..221492,221575..>221607))	Acanthamoeba castellanii str. Neff	14919370
ACA1_155710	mRNA	ACA1_155710	NW_004457490.1	221787	223898	R	ACA1_155710	complement(join(<221787..222182,222249..222498,222585..222709,222810..222905,222989..223089,223156..223275,223353..223532,223646..223694,223827..>223898))	Acanthamoeba castellanii str. Neff	14919371
ACA1_155730	mRNA	ACA1_155730	NW_004457490.1	226098	229294	R	ACA1_155730	complement(join(<226098..226248,226293..226449,226531..226623,226735..226846,226905..227079,227159..227277,227495..227593,227670..227822,227897..227989,228079..228165,228259..228356,228488..228538,228627..228771,228863..228932,229000..229041,229137..>229294))	Acanthamoeba castellanii str. Neff	14919373
ACA1_155740	mRNA	ACA1_155740	NW_004457490.1	229908	233909	D	ACA1_155740	join(<229908..230006,230086..230234,230392..230842,231015..231243,231337..231413,231511..231828,231927..232183,232207..232339,232359..232421,232514..232622,232706..232803,232916..233024,233112..233239,233331..233432,233549..233591,233676..233731,233814..>233909)	Acanthamoeba castellanii str. Neff	14919374
ACA1_155750	mRNA	ACA1_155750	NW_004457490.1	234120	234765	D	ACA1_155750	join(<234120..234124,234254..234342,234455..>234765)	Acanthamoeba castellanii str. Neff	14919375
ACA1_155760	mRNA	ACA1_155760	NW_004457490.1	235242	236182	D	ACA1_155760	join(<235242..235363,235474..235775,235844..235951,236040..>236182)	Acanthamoeba castellanii str. Neff	14919376
ACA1_155770	mRNA	ACA1_155770	NW_004457490.1	236811	237504	R	ACA1_155770	complement(join(<236811..237036,237299..>237504))	Acanthamoeba castellanii str. Neff	14919377
ACA1_155780	mRNA	ACA1_155780	NW_004457490.1	238125	239911	D	ACA1_155780	join(<238125..238339,238414..238499,238612..238753,238796..239013,239102..239178,239254..239316,239408..>239911)	Acanthamoeba castellanii str. Neff	14919378
ACA1_155790	mRNA	ACA1_155790	NW_004457490.1	240720	243795	D	ACA1_155790	join(<240720..240890,240972..241054,241166..241310,241400..241501,241592..243481,243577..>243795)	Acanthamoeba castellanii str. Neff	14919379
ACA1_155800	mRNA	ACA1_155800	NW_004457490.1	243923	244219	R	ACA1_155800	complement(<243923..>244219)	Acanthamoeba castellanii str. Neff	14919380
ACA1_155810	mRNA	ACA1_155810	NW_004457490.1	244462	247203	D	ACA1_155810	join(<244462..244747,244838..244899,245016..245102,245204..245308,245405..245570,245666..245711,245788..245889,245978..246101,246178..246426,246532..246604,246669..246760,246853..>247203)	Acanthamoeba castellanii str. Neff	14919381
ACA1_155820	mRNA	ACA1_155820	NW_004457490.1	248440	250281	D	ACA1_155820	join(<248440..248776,248895..249059,249161..249266,249348..249505,249596..249718,249822..249889,250165..>250281)	Acanthamoeba castellanii str. Neff	14919382
ACA1_044360	mRNA	ACA1_044360	NW_004457486.1	383	3477	R	ACA1_044360	complement(join(<383..421,536..603,685..1248,1800..2087,2216..2351,2440..2576,2661..2772,3055..3174,3415..>3477))	Acanthamoeba castellanii str. Neff	14919312
ACA1_044370	mRNA	ACA1_044370	NW_004457486.1	4198	4972	D	ACA1_044370	join(<4198..4249,4372..4510,4936..>4972)	Acanthamoeba castellanii str. Neff	14919304
ACA1_044380	mRNA	ACA1_044380	NW_004457486.1	5706	7164	D	ACA1_044380	join(<5706..5815,5920..6239,6332..6447,6619..7038,7084..>7164)	Acanthamoeba castellanii str. Neff	14919305
ACA1_044390	mRNA	ACA1_044390	NW_004457486.1	7627	8040	R	ACA1_044390	complement(<7627..>8040)	Acanthamoeba castellanii str. Neff	14919306
ACA1_044400	mRNA	ACA1_044400	NW_004457486.1	12146	12383	R	ACA1_044400	complement(join(<12146..12207,12245..>12383))	Acanthamoeba castellanii str. Neff	14919307
ACA1_044410	mRNA	ACA1_044410	NW_004457486.1	12774	13391	D	ACA1_044410	<12774..>13391	Acanthamoeba castellanii str. Neff	14919308
ACA1_044430	mRNA	ACA1_044430	NW_004457486.1	19342	19608	R	ACA1_044430	complement(join(<19342..19506,19582..>19608))	Acanthamoeba castellanii str. Neff	14919310
ACA1_044440	mRNA	ACA1_044440	NW_004457486.1	20372	20902	D	ACA1_044440	join(<20372..20444,20471..20583,20735..>20902)	Acanthamoeba castellanii str. Neff	14919311
ACA1_044450	mRNA	ACA1_044450	NW_004457486.1	21232	21686	D	ACA1_044450	join(<21232..21420,21518..21576,21593..>21686)	Acanthamoeba castellanii str. Neff	14919236
ACA1_044460	mRNA	ACA1_044460	NW_004457486.1	21765	23617	R	ACA1_044460	complement(join(<21765..22473,22594..22693,22787..22841,23116..23185,23239..23346,23457..>23617))	Acanthamoeba castellanii str. Neff	14919237
ACA1_044470	mRNA	ACA1_044470	NW_004457486.1	24034	25010	R	ACA1_044470	complement(join(<24034..24686,24710..>25010))	Acanthamoeba castellanii str. Neff	14919238
ACA1_044480	mRNA	ACA1_044480	NW_004457486.1	25826	29242	R	ACA1_044480	complement(join(<25826..25870,25987..26094,26168..26334,26390..26555,26684..26833,26936..27080,27183..27255,27368..27501,27559..27670,28006..28140,28232..28308,28378..28510,28978..>29242))	Acanthamoeba castellanii str. Neff	14919239
ACA1_044690	mRNA	ACA1_044690	NW_004457486.1	29623	30605	D	ACA1_044690	join(<29623..30147,30247..30351,30441..>30605)	Acanthamoeba castellanii str. Neff	14919240
ACA1_044700	mRNA	ACA1_044700	NW_004457486.1	30854	32307	R	ACA1_044700	complement(join(<30854..30961,31055..31135,31216..31268,31306..31496,31604..31738,31819..31951,32034..>32307))	Acanthamoeba castellanii str. Neff	14919241
ACA1_044710	mRNA	ACA1_044710	NW_004457486.1	32909	36230	D	ACA1_044710	join(<32909..32935,33104..33169,33284..33352,33486..33628,33734..33937,34023..34083,34184..34319,34414..34506,34598..34793,34881..35031,35292..>36230)	Acanthamoeba castellanii str. Neff	14919242
ACA1_044720	mRNA	ACA1_044720	NW_004457486.1	36419	38057	R	ACA1_044720	complement(join(<36419..36577,36674..36793,36895..36951,37162..37293,37455..37539,37614..37692,37787..37892,37962..>38057))	Acanthamoeba castellanii str. Neff	14919243
ACA1_044730	mRNA	ACA1_044730	NW_004457486.1	40088	41422	D	ACA1_044730	<40088..>41422	Acanthamoeba castellanii str. Neff	14919244
ACA1_044740	mRNA	ACA1_044740	NW_004457486.1	41814	42761	R	ACA1_044740	complement(join(<41814..42325,42401..>42761))	Acanthamoeba castellanii str. Neff	14919245
ACA1_044750	mRNA	ACA1_044750	NW_004457486.1	42897	43864	R	ACA1_044750	complement(join(<42897..43088,43253..43350,43421..43538,43778..>43864))	Acanthamoeba castellanii str. Neff	14919246
ACA1_044760	mRNA	ACA1_044760	NW_004457486.1	44512	45180	D	ACA1_044760	<44512..>45180	Acanthamoeba castellanii str. Neff	14919247
ACA1_044770	mRNA	ACA1_044770	NW_004457486.1	45459	48497	R	ACA1_044770	complement(join(<45459..45829,45946..45986,46013..46111,46207..46488,46591..46730,46834..47240,47328..47446,47536..47707,47789..47954,48051..48229,48344..>48497))	Acanthamoeba castellanii str. Neff	14919248
ACA1_044780	mRNA	ACA1_044780	NW_004457486.1	49603	49740	D	ACA1_044780	<49603..>49740	Acanthamoeba castellanii str. Neff	14919249
ACA1_044890	mRNA	ACA1_044890	NW_004457486.1	55961	56260	R	ACA1_044890	complement(<55961..>56260)	Acanthamoeba castellanii str. Neff	14919250
ACA1_044900	mRNA	ACA1_044900	NW_004457486.1	56408	57037	D	ACA1_044900	join(<56408..56596,56840..>57037)	Acanthamoeba castellanii str. Neff	14919251
ACA1_044910	mRNA	ACA1_044910	NW_004457486.1	57499	58158	R	ACA1_044910	complement(<57499..>58158)	Acanthamoeba castellanii str. Neff	14919252
ACA1_044920	mRNA	ACA1_044920	NW_004457486.1	59335	60262	R	ACA1_044920	complement(join(<59335..59391,59489..59578,59776..59846,59934..60019,60147..>60262))	Acanthamoeba castellanii str. Neff	14919253
ACA1_044930	mRNA	ACA1_044930	NW_004457486.1	60627	65081	D	ACA1_044930	join(<60627..60713,61300..62638,62777..63377,63482..>65081)	Acanthamoeba castellanii str. Neff	14919254
ACA1_044940	mRNA	ACA1_044940	NW_004457486.1	65485	69686	R	ACA1_044940	complement(join(<65485..65873,65985..66405,66559..66806,66903..66966,67064..67215,67361..67472,67697..67749,68037..68186,68563..68632,68821..69032,69150..69263,69342..69470,69566..>69686))	Acanthamoeba castellanii str. Neff	14919255
ACA1_045050	mRNA	ACA1_045050	NW_004457486.1	69943	70226	D	ACA1_045050	join(<69943..69982,70063..>70226)	Acanthamoeba castellanii str. Neff	14919256
ACA1_045060	mRNA	ACA1_045060	NW_004457486.1	70397	72694	D	ACA1_045060	join(<70397..70647,70747..70883,70974..71058,71174..71269,71342..71408,71554..71827,71902..72081,72226..72381,72474..>72694)	Acanthamoeba castellanii str. Neff	14919257
ACA1_045070	mRNA	ACA1_045070	NW_004457486.1	72837	73662	R	ACA1_045070	complement(join(<72837..73165,73267..73403,73502..>73662))	Acanthamoeba castellanii str. Neff	14919258
ACA1_045080	mRNA	ACA1_045080	NW_004457486.1	73828	75440	D	ACA1_045080	join(<73828..73861,73937..74220,74285..74344,74444..75018,75129..75221,75317..>75440)	Acanthamoeba castellanii str. Neff	14919259
ACA1_045090	mRNA	ACA1_045090	NW_004457486.1	75567	77622	R	ACA1_045090	complement(join(<75567..75656,75762..75851,75972..76073,76179..76230,76300..76408,76731..76826,76967..77008,77086..77208,77283..77398,77514..77548,77575..>77622))	Acanthamoeba castellanii str. Neff	14919260
ACA1_045200	mRNA	ACA1_045200	NW_004457486.1	77817	79418	R	ACA1_045200	complement(join(<77817..78108,78197..78322,78420..78489,78621..78768,78868..78998,79156..79267,79338..>79418))	Acanthamoeba castellanii str. Neff	14919261
ACA1_045210	mRNA	ACA1_045210	NW_004457486.1	79502	81703	D	ACA1_045210	join(<79502..79606,79691..79790,79881..80092,80146..80301,80337..80466,80572..80652,80703..80944,81016..81115,81183..>81703)	Acanthamoeba castellanii str. Neff	14919262
ACA1_045220	mRNA	ACA1_045220	NW_004457486.1	82232	85509	D	ACA1_045220	join(<82232..82339,82450..82537,82657..82790,82953..83058,83110..83161,83252..83395,83501..83689,83818..83919,84030..84114,84212..84307,84428..84606,84673..84833,84911..85039,85146..85300,85315..>85509)	Acanthamoeba castellanii str. Neff	14919263
ACA1_045230	mRNA	ACA1_045230	NW_004457486.1	85553	90515	D	ACA1_045230	join(<85553..85780,85940..86045,86139..86247,86324..86534,86629..86761,86843..86975,87069..87174,87243..87318,87394..87519,87618..87744,87994..88100,88223..88331,88407..88559,88656..88686,88778..89181,89266..89353,89479..89751,89838..89898,90049..>90515)	Acanthamoeba castellanii str. Neff	14919264
ACA1_045250	mRNA	ACA1_045250	NW_004457486.1	93587	94394	D	ACA1_045250	join(<93587..93674,93745..93796,93896..94017,94101..94242,94325..>94394)	Acanthamoeba castellanii str. Neff	14919266
ACA1_045260	mRNA	ACA1_045260	NW_004457486.1	94477	101717	R	ACA1_045260	complement(join(<94477..94799,94905..95204,95280..95448,95558..95829,95932..96040,96141..96285,96373..96537,96623..96842,96912..97068,97159..97309,97483..97682,97772..97930,98020..98136,98229..98343,98420..98821,98959..99106,99224..99901,99915..100168,100280..100716,100758..101093,101186..101323,101479..101562,101655..>101717))	Acanthamoeba castellanii str. Neff	14919267
ACA1_045270	mRNA	ACA1_045270	NW_004457486.1	102245	103285	D	ACA1_045270	join(<102245..102381,102455..102594,102741..102853,102969..103060,103162..>103285)	Acanthamoeba castellanii str. Neff	14919268
ACA1_045280	mRNA	ACA1_045280	NW_004457486.1	103709	107989	D	ACA1_045280	join(<103709..103735,103901..104039,104163..104259,104380..104497,104645..104736,104848..104908,104996..105049,105125..105189,105302..105411,105506..105679,105752..106829,106910..106973,107000..107570,107673..>107989)	Acanthamoeba castellanii str. Neff	14919269
ACA1_045290	mRNA	ACA1_045290	NW_004457486.1	108128	109353	R	ACA1_045290	complement(join(<108128..108190,108278..108468,108649..108714,108773..108889,108983..109130,109222..>109353))	Acanthamoeba castellanii str. Neff	14919270
ACA1_045300	mRNA	ACA1_045300	NW_004457486.1	109695	110819	R	ACA1_045300	complement(join(<109695..110031,110126..110240,110332..110449,110573..110688,110753..>110819))	Acanthamoeba castellanii str. Neff	14919271
ACA1_045310	mRNA	ACA1_045310	NW_004457486.1	111359	112234	R	ACA1_045310	complement(join(<111359..111721,111819..111891,111977..112005,112118..>112234))	Acanthamoeba castellanii str. Neff	14919272
ACA1_045320	mRNA	ACA1_045320	NW_004457486.1	114169	116096	D	ACA1_045320	join(<114169..115473,115552..115649,115731..115861,115936..>116096)	Acanthamoeba castellanii str. Neff	14919273
ACA1_045330	mRNA	ACA1_045330	NW_004457486.1	116123	117345	D	ACA1_045330	join(<116123..116202,116291..117060,117122..>117345)	Acanthamoeba castellanii str. Neff	14919274
ACA1_045340	mRNA	ACA1_045340	NW_004457486.1	117475	118624	D	ACA1_045340	join(<117475..117816,118010..>118624)	Acanthamoeba castellanii str. Neff	14919275
ACA1_045360	mRNA	ACA1_045360	NW_004457486.1	122234	123233	R	ACA1_045360	complement(join(<122234..122356,122437..122555,122634..122791,122862..122946,123021..123122,123182..>123233))	Acanthamoeba castellanii str. Neff	14919277
ACA1_045370	mRNA	ACA1_045370	NW_004457486.1	124077	125645	D	ACA1_045370	join(<124077..124357,124476..124636,124753..124953,125035..125145,125236..125373,125467..>125645)	Acanthamoeba castellanii str. Neff	14919278
ACA1_045380	mRNA	ACA1_045380	NW_004457486.1	126597	128851	D	ACA1_045380	join(<126597..126660,126967..127090,127173..127282,127486..127719,127739..127930,127944..127998,128014..128118,128134..>128851)	Acanthamoeba castellanii str. Neff	14919279
ACA1_045390	mRNA	ACA1_045390	NW_004457486.1	129536	131602	D	ACA1_045390	join(<129536..129813,129905..130040,130140..130460,130506..130668,130783..130827,130951..131039,131162..131240,131337..>131602)	Acanthamoeba castellanii str. Neff	14919280
ACA1_045410	mRNA	ACA1_045410	NW_004457486.1	137466	138628	D	ACA1_045410	join(<137466..137480,137501..137601,137759..137868,137962..138064,138144..138345,138410..>138628)	Acanthamoeba castellanii str. Neff	14919282
ACA1_045420	mRNA	ACA1_045420	NW_004457486.1	138760	140717	D	ACA1_045420	join(<138760..138838,138982..139083,139169..139257,139478..139548,139844..139925,140034..140225,140296..140349,140417..140473,140583..>140717)	Acanthamoeba castellanii str. Neff	14919283
ACA1_045430	mRNA	ACA1_045430	NW_004457486.1	142128	144315	D	ACA1_045430	join(<142128..142229,142406..142748,142793..>144315)	Acanthamoeba castellanii str. Neff	14919284
ACA1_045440	mRNA	ACA1_045440	NW_004457486.1	144379	146579	R	ACA1_045440	complement(join(<144379..144566,144651..144774,144873..145010,145170..145324,145426..145642,145774..145916,146066..146216,146298..>146579))	Acanthamoeba castellanii str. Neff	14919285
ACA1_045450	mRNA	ACA1_045450	NW_004457486.1	146826	147249	R	ACA1_045450	complement(join(<146826..146851,147048..>147249))	Acanthamoeba castellanii str. Neff	14919286
ACA1_045460	mRNA	ACA1_045460	NW_004457486.1	147597	150169	R	ACA1_045460	complement(join(<147597..147695,147791..147922,148024..148111,148178..148322,148439..148546,148609..148714,148828..148965,149054..149170,149254..149401,149565..>150169))	Acanthamoeba castellanii str. Neff	14919287
ACA1_045470	mRNA	ACA1_045470	NW_004457486.1	151604	155699	D	ACA1_045470	join(<151604..151635,151884..152073,152145..152291,152415..152537,152684..153743,153857..154026,154155..154254,154338..154469,154728..154876,154981..155089,155174..155313,155452..155534,155624..>155699)	Acanthamoeba castellanii str. Neff	14919288
ACA1_045480	mRNA	ACA1_045480	NW_004457486.1	155940	156275	R	ACA1_045480	complement(join(<155940..156124,156191..>156275))	Acanthamoeba castellanii str. Neff	14919289
ACA1_045590	mRNA	ACA1_045590	NW_004457486.1	157252	158165	D	ACA1_045590	join(<157252..157317,157433..157541,157627..157766,157912..157994,158090..>158165)	Acanthamoeba castellanii str. Neff	14919290
ACA1_045600	mRNA	ACA1_045600	NW_004457486.1	158456	161218	R	ACA1_045600	complement(join(<158456..158640,158746..158845,158935..159084,159212..159291,159419..159637,159751..159888,160043..160161,160289..160364,160452..160578,160638..160792,160911..161052,161159..>161218))	Acanthamoeba castellanii str. Neff	14919291
ACA1_045610	mRNA	ACA1_045610	NW_004457486.1	162175	162986	R	ACA1_045610	complement(join(<162175..162234,162346..162500,162678..162819,162927..>162986))	Acanthamoeba castellanii str. Neff	14919292
ACA1_045620	mRNA	ACA1_045620	NW_004457486.1	164200	165147	D	ACA1_045620	<164200..>165147	Acanthamoeba castellanii str. Neff	14919293
ACA1_045630	mRNA	ACA1_045630	NW_004457486.1	165272	166838	R	ACA1_045630	complement(join(<165272..165426,165546..165616,165713..165810,165881..166071,166200..166296,166550..166776,166832..>166838))	Acanthamoeba castellanii str. Neff	14919294
ACA1_045640	mRNA	ACA1_045640	NW_004457486.1	167097	168083	D	ACA1_045640	join(<167097..167192,167384..167458,167531..167658,167777..>168083)	Acanthamoeba castellanii str. Neff	14919295
ACA1_045650	mRNA	ACA1_045650	NW_004457486.1	168268	168748	R	ACA1_045650	complement(join(<168268..168404,168493..>168748))	Acanthamoeba castellanii str. Neff	14919296
ACA1_045660	mRNA	ACA1_045660	NW_004457486.1	169055	170041	R	ACA1_045660	complement(join(<169055..169288,169381..169910,170026..>170041))	Acanthamoeba castellanii str. Neff	14919297
ACA1_045670	mRNA	ACA1_045670	NW_004457486.1	170501	171379	R	ACA1_045670	complement(join(<170501..170743,170950..171060,171151..171239,171310..>171379))	Acanthamoeba castellanii str. Neff	14919298
ACA1_045680	mRNA	ACA1_045680	NW_004457486.1	172627	176029	R	ACA1_045680	complement(join(<172627..172892,173034..173231,173319..173467,173569..174072,174169..174319,174408..174558,174627..>176029))	Acanthamoeba castellanii str. Neff	14919299
ACA1_045690	mRNA	ACA1_045690	NW_004457486.1	177156	178096	D	ACA1_045690	join(<177156..177950,177962..>178096)	Acanthamoeba castellanii str. Neff	14919300
ACA1_045700	mRNA	ACA1_045700	NW_004457486.1	179075	180670	D	ACA1_045700	join(<179075..179309,179408..179523,179630..179710,179802..179867,179954..180304,180389..180490,180503..>180670)	Acanthamoeba castellanii str. Neff	14919301
ACA1_045710	mRNA	ACA1_045710	NW_004457486.1	180785	182515	R	ACA1_045710	complement(join(<180785..180919,181036..181176,181294..181364,181446..181532,181646..181747,181839..181997,182085..182214,182345..>182515))	Acanthamoeba castellanii str. Neff	14919302
ACA1_045720	mRNA	ACA1_045720	NW_004457486.1	182978	188103	D	ACA1_045720	join(<182978..183383,183524..183728,183866..184009,184083..184163,184307..184313,184352..184551,184595..184619,184734..185066,185164..185406,185481..185589,185681..185965,186037..186173,186264..186323,186433..186612,186712..186894,187003..187108,187205..187315,187391..187684,187770..187846,187957..>188103)	Acanthamoeba castellanii str. Neff	14919303
ACA1_314960	mRNA	ACA1_314960	NW_004457484.1	115	1285	R	ACA1_314960	complement(join(<115..277,377..470,550..661,724..827,945..1054,1134..>1285))	Acanthamoeba castellanii str. Neff	14919235
ACA1_314970	mRNA	ACA1_314970	NW_004457484.1	2490	5227	D	ACA1_314970	join(<2490..2658,2763..2943,3024..3096,3202..3368,3457..3566,3657..4120,4256..4355,4562..4665,4767..4907,4997..5061,5182..>5227)	Acanthamoeba castellanii str. Neff	14919224
ACA1_314980	mRNA	ACA1_314980	NW_004457484.1	5502	6750	R	ACA1_314980	complement(join(<5502..5704,5838..6214,6288..6403,6616..>6750))	Acanthamoeba castellanii str. Neff	14919234
ACA1_314990	mRNA	ACA1_314990	NW_004457484.1	6914	8547	R	ACA1_314990	complement(join(<6914..7305,7413..7547,7642..7734,7886..8050,8154..8328,8425..>8547))	Acanthamoeba castellanii str. Neff	14919225
ACA1_315000	mRNA	ACA1_315000	NW_004457484.1	8755	11048	R	ACA1_315000	complement(join(<8755..8783,8803..8879,9012..9077,9153..9340,9443..9514,9609..9718,9797..9891,9962..10025,10213..10271,10360..10422,10561..10666,10742..10862,10935..>11048))	Acanthamoeba castellanii str. Neff	14919226
ACA1_315010	mRNA	ACA1_315010	NW_004457484.1	12812	14288	D	ACA1_315010	join(<12812..13030,13116..13166,13243..13319,13403..13520,13605..13765,13831..13924,14020..14152,14233..>14288)	Acanthamoeba castellanii str. Neff	14919227
ACA1_315020	mRNA	ACA1_315020	NW_004457484.1	14376	18980	D	ACA1_315020	join(<14376..14413,14490..14590,14683..14766,14860..15031,15123..15174,15283..15349,15408..15629,15721..15870,16006..16108,16233..16314,16413..16533,16655..16739,16861..17057,17164..17237,17343..17421,17529..17626,17749..17846,17977..18039,18144..18751,18871..>18980)	Acanthamoeba castellanii str. Neff	14919228
ACA1_315030	mRNA	ACA1_315030	NW_004457484.1	19234	19605	D	ACA1_315030	join(<19234..19344,19405..>19605)	Acanthamoeba castellanii str. Neff	14919229
ACA1_315040	mRNA	ACA1_315040	NW_004457484.1	20242	22888	D	ACA1_315040	join(<20242..20248,20564..20848,21058..21635,21668..>22888)	Acanthamoeba castellanii str. Neff	14919230
ACA1_315050	mRNA	ACA1_315050	NW_004457484.1	23063	24847	R	ACA1_315050	complement(join(<23063..23439,23531..23635,23739..23787,23931..23973,24110..24177,24286..24336,24429..24482,24591..24653,24734..>24847))	Acanthamoeba castellanii str. Neff	14919231
ACA1_315060	mRNA	ACA1_315060	NW_004457484.1	25139	26988	R	ACA1_315060	complement(join(<25139..25531,25622..25740,25838..25903,25984..26134,26238..26351,26441..26562,26661..26780,26898..>26988))	Acanthamoeba castellanii str. Neff	14919232
ACA1_315070	mRNA	ACA1_315070	NW_004457484.1	27377	28631	D	ACA1_315070	join(<27377..27494,27585..27649,27739..27826,27898..27965,28075..28203,28310..28481,28558..>28631)	Acanthamoeba castellanii str. Neff	14919233
ACA1_300350	mRNA	ACA1_300350	NW_004457482.1	5	388	D	ACA1_300350	<5..>388	Acanthamoeba castellanii str. Neff	14919216
ACA1_300360	mRNA	ACA1_300360	NW_004457482.1	1095	3102	D	ACA1_300360	join(<1095..1244,1594..1790,1898..1989,2139..2239,2810..2954,3044..>3102)	Acanthamoeba castellanii str. Neff	14919223
ACA1_300470	mRNA	ACA1_300470	NW_004457482.1	3205	4836	R	ACA1_300470	complement(join(<3205..3315,3419..3507,3578..3692,3767..3849,3933..4082,4279..4395,4504..4559,4694..>4836))	Acanthamoeba castellanii str. Neff	14919219
ACA1_300490	mRNA	ACA1_300490	NW_004457482.1	6947	8107	R	ACA1_300490	complement(join(<6947..7484,7602..7673,7759..7839,7965..>8107))	Acanthamoeba castellanii str. Neff	14919222
ACA1_300500	mRNA	ACA1_300500	NW_004457482.1	10175	11924	D	ACA1_300500	join(<10175..10207,10318..10405,10516..10700,10790..10877,10996..11073,11157..11237,11381..11388,11405..11515,11631..>11924)	Acanthamoeba castellanii str. Neff	14919221
ACA1_300510	mRNA	ACA1_300510	NW_004457482.1	12084	13637	R	ACA1_300510	complement(join(<12084..12123,12226..12286,12418..12571,12662..12800,12898..12980,13091..13236,13385..13463,13623..>13637))	Acanthamoeba castellanii str. Neff	14919217
ACA1_300520	mRNA	ACA1_300520	NW_004457482.1	13781	20544	D	ACA1_300520	join(<13781..13858,13938..13991,14092..14133,14208..14260,14353..14452,14685..15126,15270..15430,15554..15584,15704..15778,15867..15958,16070..16135,16237..16338,19216..19353,19499..19656,19743..19917,19996..20116,20198..20286,20380..>20544)	Acanthamoeba castellanii str. Neff	14919218
ACA1_011380	mRNA	ACA1_011380	NW_004457480.1	103	932	D	ACA1_011380	join(<103..213,350..401,487..603,733..>932)	Acanthamoeba castellanii str. Neff	14919212
ACA1_011490	mRNA	ACA1_011490	NW_004457480.1	6874	8930	D	ACA1_011490	join(<6874..7027,7132..7211,7314..7396,7466..7562,7647..7773,7874..7982,8061..8135,8212..8275,8336..8414,8530..8807,8907..>8930)	Acanthamoeba castellanii str. Neff	14919215
ACA1_011600	mRNA	ACA1_011600	NW_004457480.1	10684	11022	R	ACA1_011600	complement(join(<10684..10805,10878..>11022))	Acanthamoeba castellanii str. Neff	14919214
ACA1_011810	mRNA	ACA1_011810	NW_004457480.1	14817	15751	R	ACA1_011810	complement(join(<14817..15244,15378..15508,15687..>15751))	Acanthamoeba castellanii str. Neff	14919213
ACA1_136730	mRNA	ACA1_136730	NW_004457477.1	489	1226	R	ACA1_136730	complement(join(<489..1060,1139..>1226))	Acanthamoeba castellanii str. Neff	14919196
ACA1_136740	mRNA	ACA1_136740	NW_004457477.1	1317	1976	R	ACA1_136740	complement(<1317..>1976)	Acanthamoeba castellanii str. Neff	14919158
ACA1_136750	mRNA	ACA1_136750	NW_004457477.1	3133	3525	R	ACA1_136750	complement(join(<3133..3184,3311..>3525))	Acanthamoeba castellanii str. Neff	14919159
ACA1_136760	mRNA	ACA1_136760	NW_004457477.1	3901	4803	R	ACA1_136760	complement(join(<3901..4422,4497..4677,4700..>4803))	Acanthamoeba castellanii str. Neff	14919197
ACA1_136770	mRNA	ACA1_136770	NW_004457477.1	5569	6405	D	ACA1_136770	join(<5569..5790,5875..>6405)	Acanthamoeba castellanii str. Neff	14919150
ACA1_136780	mRNA	ACA1_136780	NW_004457477.1	6624	8471	D	ACA1_136780	join(<6624..6818,6912..7077,7153..8148,8279..8360,8441..>8471)	Acanthamoeba castellanii str. Neff	14919151
ACA1_136790	mRNA	ACA1_136790	NW_004457477.1	9371	11908	D	ACA1_136790	join(<9371..9719,9828..9992,10083..10188,10293..10450,10527..10649,10738..10805,10902..10967,11049..11701,11791..>11908)	Acanthamoeba castellanii str. Neff	14919152
ACA1_136800	mRNA	ACA1_136800	NW_004457477.1	13280	14689	R	ACA1_136800	complement(<13280..>14689)	Acanthamoeba castellanii str. Neff	14919153
ACA1_136810	mRNA	ACA1_136810	NW_004457477.1	14871	16138	R	ACA1_136810	complement(join(<14871..14891,14942..14994,15121..15570,15667..>16138))	Acanthamoeba castellanii str. Neff	14919154
ACA1_136820	mRNA	ACA1_136820	NW_004457477.1	17334	17971	R	ACA1_136820	complement(join(<17334..17592,17616..>17971))	Acanthamoeba castellanii str. Neff	14919155
ACA1_136830	mRNA	ACA1_136830	NW_004457477.1	18133	18462	R	ACA1_136830	complement(<18133..>18462)	Acanthamoeba castellanii str. Neff	14919156
ACA1_136840	mRNA	ACA1_136840	NW_004457477.1	18998	19341	R	ACA1_136840	complement(join(<18998..19159,19255..>19341))	Acanthamoeba castellanii str. Neff	14919157
ACA1_136850	mRNA	ACA1_136850	NW_004457477.1	20854	21243	R	ACA1_136850	complement(<20854..>21243)	Acanthamoeba castellanii str. Neff	14919139
ACA1_137060	mRNA	ACA1_137060	NW_004457477.1	24323	27697	D	ACA1_137060	join(<24323..25250,25403..25869,26825..>27697)	Acanthamoeba castellanii str. Neff	14919140
ACA1_137270	mRNA	ACA1_137270	NW_004457477.1	28634	29496	R	ACA1_137270	complement(join(<28634..28883,28962..29286,29370..>29496))	Acanthamoeba castellanii str. Neff	14919141
ACA1_137280	mRNA	ACA1_137280	NW_004457477.1	29798	30143	R	ACA1_137280	complement(join(<29798..29916,29927..30091,30116..>30143))	Acanthamoeba castellanii str. Neff	14919142
ACA1_137290	mRNA	ACA1_137290	NW_004457477.1	30694	31414	D	ACA1_137290	join(<30694..30965,31083..31143,31174..31278,31358..>31414)	Acanthamoeba castellanii str. Neff	14919143
ACA1_137300	mRNA	ACA1_137300	NW_004457477.1	31731	33821	D	ACA1_137300	join(<31731..31810,31825..32135,32189..32291,32407..32482,32671..32866,33455..33534,33786..>33821)	Acanthamoeba castellanii str. Neff	14919144
ACA1_137310	mRNA	ACA1_137310	NW_004457477.1	34295	39382	R	ACA1_137310	complement(join(<34295..34387,34593..34706,34783..34905,35040..35118,35207..35294,35607..35700,35769..35904,35944..35999,36082..36222,36301..36527,36650..36796,36912..36975,37048..37092,37193..37294,37411..37495,37717..38702,38794..38969,39226..>39382))	Acanthamoeba castellanii str. Neff	14919145
ACA1_137420	mRNA	ACA1_137420	NW_004457477.1	39723	40836	R	ACA1_137420	complement(join(<39723..40236,40430..40576,40678..40722,40811..>40836))	Acanthamoeba castellanii str. Neff	14919146
ACA1_137430	mRNA	ACA1_137430	NW_004457477.1	41055	44972	D	ACA1_137430	join(<41055..41262,41399..41576,41623..41701,41785..41834,42131..42243,42327..42421,42506..42581,42652..42693,42780..42919,42994..43151,43221..43363,43441..43534,43625..43679,43781..44605,44684..44758,44862..>44972)	Acanthamoeba castellanii str. Neff	14919147
ACA1_137440	mRNA	ACA1_137440	NW_004457477.1	45144	45806	D	ACA1_137440	join(<45144..45352,45438..45540,45628..45771,45798..>45806)	Acanthamoeba castellanii str. Neff	14919148
ACA1_137450	mRNA	ACA1_137450	NW_004457477.1	46006	47286	D	ACA1_137450	join(<46006..46560,46728..47090,47212..>47286)	Acanthamoeba castellanii str. Neff	14919149
ACA1_137460	mRNA	ACA1_137460	NW_004457477.1	48551	51163	D	ACA1_137460	join(<48551..48717,48753..48839,48911..49021,49169..49247,49322..49651,49688..49968,50038..>51163)	Acanthamoeba castellanii str. Neff	14919160
ACA1_137470	mRNA	ACA1_137470	NW_004457477.1	51745	53624	R	ACA1_137470	complement(join(<51745..51783,51995..52201,52281..52395,52525..52666,52765..52857,53008..53086,53253..53398,53498..>53624))	Acanthamoeba castellanii str. Neff	14919161
ACA1_137580	mRNA	ACA1_137580	NW_004457477.1	55812	58741	R	ACA1_137580	complement(join(<55812..56076,56201..56334,56460..57173,57268..57908,58131..58215,58296..58427,58534..58673,58708..>58741))	Acanthamoeba castellanii str. Neff	14919162
ACA1_137590	mRNA	ACA1_137590	NW_004457477.1	59261	59556	D	ACA1_137590	join(<59261..59282,59297..>59556)	Acanthamoeba castellanii str. Neff	14919163
ACA1_137600	mRNA	ACA1_137600	NW_004457477.1	59796	60373	D	ACA1_137600	join(<59796..60148,60211..>60373)	Acanthamoeba castellanii str. Neff	14919164
ACA1_137620	mRNA	ACA1_137620	NW_004457477.1	61778	62241	D	ACA1_137620	join(<61778..61906,61963..>62241)	Acanthamoeba castellanii str. Neff	14919166
ACA1_137630	mRNA	ACA1_137630	NW_004457477.1	62329	62622	D	ACA1_137630	<62329..>62622	Acanthamoeba castellanii str. Neff	14919167
ACA1_137640	mRNA	ACA1_137640	NW_004457477.1	62768	63058	R	ACA1_137640	complement(<62768..>63058)	Acanthamoeba castellanii str. Neff	14919168
ACA1_137650	mRNA	ACA1_137650	NW_004457477.1	63430	65539	R	ACA1_137650	complement(join(<63430..63716,63791..63875,63953..64084,64167..64281,64368..64512,64598..64784,64872..65020,65126..65305,65365..>65539))	Acanthamoeba castellanii str. Neff	14919169
ACA1_137760	mRNA	ACA1_137760	NW_004457477.1	67705	68686	D	ACA1_137760	join(<67705..67724,67795..67855,67926..68060,68175..68252,68384..68464,68579..>68686)	Acanthamoeba castellanii str. Neff	14919170
ACA1_137770	mRNA	ACA1_137770	NW_004457477.1	68857	70385	R	ACA1_137770	complement(join(<68857..69131,69236..69373,69460..69570,69675..69965,70052..>70385))	Acanthamoeba castellanii str. Neff	14919171
ACA1_137780	mRNA	ACA1_137780	NW_004457477.1	70507	71161	R	ACA1_137780	complement(join(<70507..70618,70701..>71161))	Acanthamoeba castellanii str. Neff	14919172
ACA1_137790	mRNA	ACA1_137790	NW_004457477.1	72156	72868	R	ACA1_137790	complement(join(<72156..72181,72302..72417,72484..72675,72756..>72868))	Acanthamoeba castellanii str. Neff	14919173
ACA1_137800	mRNA	ACA1_137800	NW_004457477.1	73061	73756	R	ACA1_137800	complement(join(<73061..73288,73384..73593,73685..>73756))	Acanthamoeba castellanii str. Neff	14919174
ACA1_137810	mRNA	ACA1_137810	NW_004457477.1	73893	76491	R	ACA1_137810	complement(join(<73893..74103,74201..74334,74461..74515,74623..75501,75630..75859,75970..76135,76256..76340,76401..>76491))	Acanthamoeba castellanii str. Neff	14919175
ACA1_137820	mRNA	ACA1_137820	NW_004457477.1	76877	77724	D	ACA1_137820	join(<76877..77127,77304..77415,77431..>77724)	Acanthamoeba castellanii str. Neff	14919176
ACA1_137930	mRNA	ACA1_137930	NW_004457477.1	78432	78704	R	ACA1_137930	complement(<78432..>78704)	Acanthamoeba castellanii str. Neff	14919198
ACA1_138040	mRNA	ACA1_138040	NW_004457477.1	79006	79989	D	ACA1_138040	<79006..>79989	Acanthamoeba castellanii str. Neff	14919199
ACA1_138050	mRNA	ACA1_138050	NW_004457477.1	80373	82876	D	ACA1_138050	join(<80373..80435,80446..80535,80622..80738,80807..80980,81077..81202,81312..81401,81494..81592,81666..82298,82406..82483,82637..>82876)	Acanthamoeba castellanii str. Neff	14919200
ACA1_138060	mRNA	ACA1_138060	NW_004457477.1	83282	84418	R	ACA1_138060	complement(join(<83282..83603,83726..83840,83980..84153,84228..84282,84359..>84418))	Acanthamoeba castellanii str. Neff	14919201
ACA1_138070	mRNA	ACA1_138070	NW_004457477.1	85084	91470	R	ACA1_138070	complement(join(<85084..85276,85350..85430,85515..85872,85956..86167,86237..86699,86719..86790,86930..87075,87156..87372,87523..87797,87879..88146,88296..88427,88505..88586,88670..88840,88985..89140,89243..89316,89388..89607,89684..90146,90219..90329,90431..90977,91068..>91470))	Acanthamoeba castellanii str. Neff	14919202
ACA1_138180	mRNA	ACA1_138180	NW_004457477.1	92090	96388	R	ACA1_138180	complement(join(<92090..92164,92246..92377,92484..92609,92656..92744,93249..93378,93529..93639,93826..93943,94012..94114,94206..94347,94434..94594,94690..94813,94885..95021,95225..95323,95344..95559,95708..95779,95866..96045,96145..96198,96277..>96388))	Acanthamoeba castellanii str. Neff	14919203
ACA1_138290	mRNA	ACA1_138290	NW_004457477.1	96489	96896	D	ACA1_138290	join(<96489..96589,96695..>96896)	Acanthamoeba castellanii str. Neff	14919204
ACA1_138300	mRNA	ACA1_138300	NW_004457477.1	96948	98446	R	ACA1_138300	complement(join(<96948..97010,97114..97405,97474..97673,97755..97807,97911..98040,98195..98295,98398..>98446))	Acanthamoeba castellanii str. Neff	14919205
ACA1_138310	mRNA	ACA1_138310	NW_004457477.1	98834	104000	D	ACA1_138310	join(<98834..99739,99864..99951,100139..100239,100701..100738,101016..101141,101351..101492,101604..102029,102126..102317,102427..102588,102698..102835,102937..103096,103218..103790,103885..>104000)	Acanthamoeba castellanii str. Neff	14919206
ACA1_138320	mRNA	ACA1_138320	NW_004457477.1	104348	106642	D	ACA1_138320	join(<104348..104374,104582..104746,104866..105017,105166..105244,105360..105452,105555..105739,105826..>106642)	Acanthamoeba castellanii str. Neff	14919207
ACA1_138330	mRNA	ACA1_138330	NW_004457477.1	106792	109353	R	ACA1_138330	complement(join(<106792..107756,107863..108047,108157..108272,108417..108559,108642..108756,109013..109143,109302..>109353))	Acanthamoeba castellanii str. Neff	14919208
ACA1_138340	mRNA	ACA1_138340	NW_004457477.1	110034	113308	D	ACA1_138340	join(<110034..110072,110191..110287,110347..110384,110490..110591,110670..110811,110961..112107,112256..112542,112638..112708,112784..112900,112981..113061,113171..>113308)	Acanthamoeba castellanii str. Neff	14919209
ACA1_138350	mRNA	ACA1_138350	NW_004457477.1	113863	116301	D	ACA1_138350	join(<113863..114060,114180..114371,114461..114595,114727..114876,114998..115109,115214..115351,115469..115659,115719..115848,115929..116055,116145..>116301)	Acanthamoeba castellanii str. Neff	14919210
ACA1_138360	mRNA	ACA1_138360	NW_004457477.1	116517	117567	R	ACA1_138360	complement(join(<116517..116719,116836..116911,117001..117099,117158..117226,117310..117362,117468..>117567))	Acanthamoeba castellanii str. Neff	14919211
ACA1_138370	mRNA	ACA1_138370	NW_004457477.1	117939	120428	R	ACA1_138370	complement(join(<117939..118044,118122..118261,118327..118773,118849..118885,118945..119000,119075..119264,119403..119515,119713..119805,119835..120007,120116..120264,120388..>120428))	Acanthamoeba castellanii str. Neff	14919177
ACA1_138380	mRNA	ACA1_138380	NW_004457477.1	120789	122327	D	ACA1_138380	join(<120789..121230,121364..121481,121601..121805,121976..122110,122190..>122327)	Acanthamoeba castellanii str. Neff	14919178
ACA1_138390	mRNA	ACA1_138390	NW_004457477.1	123247	125481	R	ACA1_138390	complement(join(<123247..123369,123492..123691,123807..124785,124800..125001,125125..125237,125311..>125481))	Acanthamoeba castellanii str. Neff	14919179
ACA1_138400	mRNA	ACA1_138400	NW_004457477.1	126871	129093	R	ACA1_138400	complement(join(<126871..126990,127014..127794,127862..127901,128087..128194,128369..128486,128578..128657,128709..128817,128962..>129093))	Acanthamoeba castellanii str. Neff	14919180
ACA1_138410	mRNA	ACA1_138410	NW_004457477.1	130656	132123	R	ACA1_138410	complement(join(<130656..130783,130890..131213,131313..131473,131600..131677,131846..>132123))	Acanthamoeba castellanii str. Neff	14919181
ACA1_138420	mRNA	ACA1_138420	NW_004457477.1	132303	135339	R	ACA1_138420	complement(join(<132303..132402,132498..132642,132866..133038,133203..133338,133435..133741,133826..133941,134042..134138,134259..134626,134737..134806,134896..135085,135317..>135339))	Acanthamoeba castellanii str. Neff	14919182
ACA1_138430	mRNA	ACA1_138430	NW_004457477.1	135459	138939	D	ACA1_138430	join(<135459..135683,135936..136021,136194..136420,136559..138294,138409..138543,138664..138760,138803..>138939)	Acanthamoeba castellanii str. Neff	14919183
ACA1_138440	mRNA	ACA1_138440	NW_004457477.1	139879	140137	R	ACA1_138440	complement(join(<139879..140028,140090..>140137))	Acanthamoeba castellanii str. Neff	14919184
ACA1_138450	mRNA	ACA1_138450	NW_004457477.1	140834	142302	R	ACA1_138450	complement(join(<140834..140949,141055..141218,141308..141408,141513..141628,141710..141830,141931..142002,142150..>142302))	Acanthamoeba castellanii str. Neff	14919185
ACA1_138460	mRNA	ACA1_138460	NW_004457477.1	142818	145911	R	ACA1_138460	complement(join(<142818..142998,143069..143224,143296..143432,143510..144025,144104..144534,144657..144733,144827..144977,145071..145132,145205..145308,145396..145463,145546..145609,145681..>145911))	Acanthamoeba castellanii str. Neff	14919186
ACA1_138470	mRNA	ACA1_138470	NW_004457477.1	146323	147564	D	ACA1_138470	join(<146323..146356,146424..146497,146584..146674,146762..146878,146961..147008,147108..147254,147323..>147564)	Acanthamoeba castellanii str. Neff	14919187
ACA1_138480	mRNA	ACA1_138480	NW_004457477.1	148338	149033	R	ACA1_138480	complement(join(<148338..148666,148751..148817,148890..>149033))	Acanthamoeba castellanii str. Neff	14919188
ACA1_138490	mRNA	ACA1_138490	NW_004457477.1	149388	152703	R	ACA1_138490	complement(join(<149388..149453,149568..149669,149746..149862,149978..150033,150177..150357,150446..150574,150680..150754,150947..151024,151105..151175,151247..151355,151659..151741,151806..>152703))	Acanthamoeba castellanii str. Neff	14919189
ACA1_138500	mRNA	ACA1_138500	NW_004457477.1	153453	154938	R	ACA1_138500	complement(join(<153453..153574,153799..153921,154017..154146,154262..154329,154456..154581,154674..154800,154915..>154938))	Acanthamoeba castellanii str. Neff	14919190
ACA1_138510	mRNA	ACA1_138510	NW_004457477.1	155475	158788	D	ACA1_138510	join(<155475..155595,155699..155900,155971..156166,156240..156407,156495..156621,156697..156824,156897..156958,157061..157190,157265..157351,157424..157520,157578..157640,157781..157942,158014..158114,158202..158266,158398..>158788)	Acanthamoeba castellanii str. Neff	14919191
ACA1_138520	mRNA	ACA1_138520	NW_004457477.1	159376	161522	D	ACA1_138520	join(<159376..159708,159798..159915,160019..160269,160391..160596,160692..160772,160908..161038,161137..161261,161361..>161522)	Acanthamoeba castellanii str. Neff	14919192
ACA1_138530	mRNA	ACA1_138530	NW_004457477.1	161652	162518	R	ACA1_138530	complement(join(<161652..161962,162095..>162518))	Acanthamoeba castellanii str. Neff	14919193
ACA1_138540	mRNA	ACA1_138540	NW_004457477.1	162615	163765	R	ACA1_138540	complement(join(<162615..163357,163447..>163765))	Acanthamoeba castellanii str. Neff	14919194
ACA1_138650	mRNA	ACA1_138650	NW_004457477.1	169276	169884	R	ACA1_138650	complement(join(<169276..169473,169624..169736,169815..>169884))	Acanthamoeba castellanii str. Neff	14919195
ACA1_321540	mRNA	ACA1_321540	NW_004457475.1	63	284	D	ACA1_321540	<63..>284	Acanthamoeba castellanii str. Neff	14919130
ACA1_321550	mRNA	ACA1_321550	NW_004457475.1	751	2506	R	ACA1_321550	complement(join(<751..950,1152..1297,1374..1472,1626..1954,2050..2071,2082..2370,2467..>2506))	Acanthamoeba castellanii str. Neff	14919136
ACA1_321560	mRNA	ACA1_321560	NW_004457475.1	2780	4875	R	ACA1_321560	complement(join(<2780..2979,3084..3235,3354..3476,3621..3723,3818..3895,4012..4143,4242..4331,4434..>4875))	Acanthamoeba castellanii str. Neff	14919137
ACA1_321570	mRNA	ACA1_321570	NW_004457475.1	5069	7157	R	ACA1_321570	complement(join(<5069..5128,5236..5310,5390..5452,5559..5633,5755..5846,5938..6082,6165..6263,6349..6408,6492..6537,6607..6681,6760..6861,7012..>7157))	Acanthamoeba castellanii str. Neff	14919138
ACA1_321580	mRNA	ACA1_321580	NW_004457475.1	7499	9936	D	ACA1_321580	join(<7499..7609,7684..7757,7847..7939,8032..8104,8188..8271,8321..8449,8518..8636,8691..8864,8946..9045,9127..9365,9461..9578,9662..9727,9823..>9936)	Acanthamoeba castellanii str. Neff	14919131
ACA1_321590	mRNA	ACA1_321590	NW_004457475.1	11149	13515	D	ACA1_321590	join(<11149..11226,11303..11365,11462..11793,11875..11936,11982..12219,12301..12680,12708..12902,12985..13071,13173..13202,13221..13306,13378..>13515)	Acanthamoeba castellanii str. Neff	14919132
ACA1_321600	mRNA	ACA1_321600	NW_004457475.1	13965	21104	D	ACA1_321600	join(<13965..14078,14253..14400,14622..14775,14859..15539,15768..16066,16146..16301,16390..17114,17221..17535,17575..18197,18308..18547,18639..19006,19082..19202,19330..19473,19492..19739,19888..19994,20058..20724,20807..21022,21097..>21104)	Acanthamoeba castellanii str. Neff	14919133
ACA1_321610	mRNA	ACA1_321610	NW_004457475.1	21512	24338	D	ACA1_321610	join(<21512..21863,21981..22123,22200..22458,22545..22784,22885..23273,23453..23907,24000..24109,24190..>24338)	Acanthamoeba castellanii str. Neff	14919134
ACA1_321620	mRNA	ACA1_321620	NW_004457475.1	24517	27347	R	ACA1_321620	complement(join(<24517..24915,25020..25225,25342..25770,25835..25943,26025..27122,27240..>27347))	Acanthamoeba castellanii str. Neff	14919135
ACA1_310050	mRNA	ACA1_310050	NW_004457473.1	1194	3410	D	ACA1_310050	join(<1194..1344,1387..1492,1573..1795,2418..2540,2612..2677,2762..3004,3102..>3410)	Acanthamoeba castellanii str. Neff	14919123
ACA1_310370	mRNA	ACA1_310370	NW_004457473.1	5598	5915	D	ACA1_310370	join(<5598..5784,5863..>5915)	Acanthamoeba castellanii str. Neff	14919121
ACA1_310480	mRNA	ACA1_310480	NW_004457473.1	6277	8787	R	ACA1_310480	complement(join(<6277..6492,6581..6751,6892..7166,7283..7555,7634..7975,8084..8133,8246..8608,8747..>8787))	Acanthamoeba castellanii str. Neff	14919124
ACA1_310490	mRNA	ACA1_310490	NW_004457473.1	9037	11131	D	ACA1_310490	join(<9037..9094,9193..9332,9423..9520,9604..9695,9823..9903,9978..10045,10181..10300,10412..10913,10995..>11131)	Acanthamoeba castellanii str. Neff	14919125
ACA1_310500	mRNA	ACA1_310500	NW_004457473.1	11476	13052	D	ACA1_310500	join(<11476..11562,11671..11761,11823..12113,12190..12551,12822..>13052)	Acanthamoeba castellanii str. Neff	14919126
ACA1_310610	mRNA	ACA1_310610	NW_004457473.1	13136	15127	R	ACA1_310610	complement(join(<13136..13162,13239..13565,13674..13799,13899..14188,14271..14449,14574..14666,14808..>15127))	Acanthamoeba castellanii str. Neff	14919127
ACA1_310620	mRNA	ACA1_310620	NW_004457473.1	15518	18556	R	ACA1_310620	complement(join(<15518..15889,15970..16204,16286..16862,16945..17019,17086..17259,17353..17697,17785..18243,18355..>18556))	Acanthamoeba castellanii str. Neff	14919128
ACA1_310630	mRNA	ACA1_310630	NW_004457473.1	19298	20194	R	ACA1_310630	complement(join(<19298..19345,19423..19669,19767..19972,20075..>20194))	Acanthamoeba castellanii str. Neff	14919129
ACA1_119590	mRNA	ACA1_119590	NW_004457471.1	944	2362	R	ACA1_119590	complement(join(<944..1036,1058..1098,1192..1348,1432..1632,1787..1952,2043..>2362))	Acanthamoeba castellanii str. Neff	14919114
ACA1_119600	mRNA	ACA1_119600	NW_004457471.1	2504	4430	D	ACA1_119600	join(<2504..2724,2805..2923,3000..3076,3183..3460,3549..3805,3914..4122,4212..>4430)	Acanthamoeba castellanii str. Neff	14919120
ACA1_119610	mRNA	ACA1_119610	NW_004457471.1	4683	6730	D	ACA1_119610	join(<4683..4722,4777..4885,5001..5122,5250..5326,5455..5616,5713..5807,5913..6169,6241..6449,6533..>6730)	Acanthamoeba castellanii str. Neff	14919115
ACA1_119730	mRNA	ACA1_119730	NW_004457471.1	9184	10556	D	ACA1_119730	join(<9184..9379,9491..9583,9709..9804,9874..10017,10092..10219,10285..10407,10521..>10556)	Acanthamoeba castellanii str. Neff	14919118
ACA1_119840	mRNA	ACA1_119840	NW_004457471.1	15685	16168	D	ACA1_119840	join(<15685..15786,15859..16023,16121..>16168)	Acanthamoeba castellanii str. Neff	14919116
ACA1_367650	mRNA	ACA1_367650	NW_004457466.1	1262	3342	D	ACA1_367650	join(<1262..2417,2578..3136,3162..>3342)	Acanthamoeba castellanii str. Neff	14919025
ACA1_367760	mRNA	ACA1_367760	NW_004457466.1	3761	4198	D	ACA1_367760	join(<3761..3814,3832..4173,4193..>4198)	Acanthamoeba castellanii str. Neff	14918988
ACA1_367770	mRNA	ACA1_367770	NW_004457466.1	4485	6030	R	ACA1_367770	complement(join(<4485..4725,4810..4958,5060..5135,5210..5362,5456..5550,5623..5763,5893..>6030))	Acanthamoeba castellanii str. Neff	14918986
ACA1_367880	mRNA	ACA1_367880	NW_004457466.1	6417	7482	R	ACA1_367880	complement(join(<6417..6427,6456..>7482))	Acanthamoeba castellanii str. Neff	14918987
ACA1_367890	mRNA	ACA1_367890	NW_004457466.1	8102	9632	R	ACA1_367890	complement(join(<8102..8291,8390..8464,8549..8616,8765..8887,8974..9160,9277..9478,9563..>9632))	Acanthamoeba castellanii str. Neff	14918989
ACA1_367900	mRNA	ACA1_367900	NW_004457466.1	9872	11226	D	ACA1_367900	join(<9872..9900,10009..10081,10190..10237,10333..10563,10687..10728,10859..10965,11118..>11226)	Acanthamoeba castellanii str. Neff	14918990
ACA1_367910	mRNA	ACA1_367910	NW_004457466.1	11811	14523	D	ACA1_367910	join(<11811..12044,12210..12429,12589..12702,12798..13180,13229..13328,13433..13552,13652..13857,13941..14103,14216..>14523)	Acanthamoeba castellanii str. Neff	14918991
ACA1_367920	mRNA	ACA1_367920	NW_004457466.1	14814	15717	R	ACA1_367920	complement(join(<14814..15210,15374..>15717))	Acanthamoeba castellanii str. Neff	14918992
ACA1_367930	mRNA	ACA1_367930	NW_004457466.1	15984	16559	R	ACA1_367930	complement(<15984..>16559)	Acanthamoeba castellanii str. Neff	14918993
ACA1_367940	mRNA	ACA1_367940	NW_004457466.1	17066	19638	D	ACA1_367940	join(<17066..17207,17338..17646,17793..18095,18229..18711,18830..>19638)	Acanthamoeba castellanii str. Neff	14918994
ACA1_367950	mRNA	ACA1_367950	NW_004457466.1	19849	21929	D	ACA1_367950	join(<19849..20302,20462..20585,20674..20951,21020..21154,21186..21408,21500..>21929)	Acanthamoeba castellanii str. Neff	14918995
ACA1_367960	mRNA	ACA1_367960	NW_004457466.1	22027	22614	D	ACA1_367960	<22027..>22614	Acanthamoeba castellanii str. Neff	14918996
ACA1_367970	mRNA	ACA1_367970	NW_004457466.1	22985	29184	D	ACA1_367970	join(<22985..23279,23399..23426,23543..23670,23771..23896,24045..24330,24389..24491,24651..24822,24913..25013,25077..25151,25254..27651,27761..27874,27994..28188,28267..28396,28503..>29184)	Acanthamoeba castellanii str. Neff	14918997
ACA1_367980	mRNA	ACA1_367980	NW_004457466.1	29341	32084	R	ACA1_367980	complement(join(<29341..29525,29618..29785,29892..30033,30117..30200,30278..30462,30575..30668,30759..30991,31089..31206,31333..31424,31505..31619,31722..>32084))	Acanthamoeba castellanii str. Neff	14918998
ACA1_367990	mRNA	ACA1_367990	NW_004457466.1	32322	33236	D	ACA1_367990	join(<32322..32601,32702..33003,33099..>33236)	Acanthamoeba castellanii str. Neff	14918999
ACA1_368010	mRNA	ACA1_368010	NW_004457466.1	36900	37594	D	ACA1_368010	join(<36900..36940,37005..37184,37255..37358,37449..>37594)	Acanthamoeba castellanii str. Neff	14918891
ACA1_368020	mRNA	ACA1_368020	NW_004457466.1	37690	38320	R	ACA1_368020	complement(join(<37690..37727,37819..37950,38031..38081,38170..>38320))	Acanthamoeba castellanii str. Neff	14918892
ACA1_368030	mRNA	ACA1_368030	NW_004457466.1	38508	39928	R	ACA1_368030	complement(join(<38508..38702,38714..38848,38916..39077,39123..39296,39397..39633,39770..>39928))	Acanthamoeba castellanii str. Neff	14918893
ACA1_368040	mRNA	ACA1_368040	NW_004457466.1	40273	41874	D	ACA1_368040	join(<40273..40278,40395..40677,40800..40943,41022..41140,41233..41374,41465..41610,41704..>41874)	Acanthamoeba castellanii str. Neff	14918894
ACA1_368050	mRNA	ACA1_368050	NW_004457466.1	42181	43081	D	ACA1_368050	join(<42181..42255,42479..42586,42678..42824,42929..>43081)	Acanthamoeba castellanii str. Neff	14918895
ACA1_368060	mRNA	ACA1_368060	NW_004457466.1	43361	46789	D	ACA1_368060	join(<43361..44389,44532..44836,44897..45032,45129..46053,46175..46321,46399..46486,46567..>46789)	Acanthamoeba castellanii str. Neff	14918896
ACA1_368070	mRNA	ACA1_368070	NW_004457466.1	46863	47282	R	ACA1_368070	complement(<46863..>47282)	Acanthamoeba castellanii str. Neff	14918897
ACA1_368080	mRNA	ACA1_368080	NW_004457466.1	47478	50512	R	ACA1_368080	complement(join(<47478..48062,48126..48424,48547..49179,49281..49417,49489..49774,50068..>50512))	Acanthamoeba castellanii str. Neff	14918898
ACA1_368090	mRNA	ACA1_368090	NW_004457466.1	51780	53759	R	ACA1_368090	complement(join(<51780..51858,51934..52138,52209..52379,52460..52587,52664..52718,52793..52883,52959..53152,53257..53348,53443..53507,53682..>53759))	Acanthamoeba castellanii str. Neff	14918899
ACA1_368100	mRNA	ACA1_368100	NW_004457466.1	53940	55646	D	ACA1_368100	join(<53940..54137,54244..54347,54421..54571,54650..54777,54866..55075,55162..55315,55395..>55646)	Acanthamoeba castellanii str. Neff	14918900
ACA1_368110	mRNA	ACA1_368110	NW_004457466.1	56036	58677	D	ACA1_368110	join(<56036..56254,56338..56916,56981..57086,57168..57236,57347..57481,57550..57668,57742..57847,57930..58309,58474..>58677)	Acanthamoeba castellanii str. Neff	14918901
ACA1_368120	mRNA	ACA1_368120	NW_004457466.1	59156	61252	D	ACA1_368120	join(<59156..59518,59614..60373,60442..60539,60632..60861,60957..61092,61172..>61252)	Acanthamoeba castellanii str. Neff	14918902
ACA1_368130	mRNA	ACA1_368130	NW_004457466.1	61878	63095	R	ACA1_368130	complement(<61878..>63095)	Acanthamoeba castellanii str. Neff	14918903
ACA1_368140	mRNA	ACA1_368140	NW_004457466.1	64314	66871	R	ACA1_368140	complement(join(<64314..65474,65570..65693,65790..66043,66119..66267,66373..66404,66481..66573,66651..66756,66835..>66871))	Acanthamoeba castellanii str. Neff	14918904
ACA1_368150	mRNA	ACA1_368150	NW_004457466.1	67581	68865	R	ACA1_368150	complement(join(<67581..67691,67882..68567,68787..>68865))	Acanthamoeba castellanii str. Neff	14918905
ACA1_368160	mRNA	ACA1_368160	NW_004457466.1	69245	70863	D	ACA1_368160	join(<69245..69271,69496..70498,70610..>70863)	Acanthamoeba castellanii str. Neff	14918906
ACA1_368170	mRNA	ACA1_368170	NW_004457466.1	71093	71756	D	ACA1_368170	join(<71093..71184,71348..71420,71538..>71756)	Acanthamoeba castellanii str. Neff	14918907
ACA1_368180	mRNA	ACA1_368180	NW_004457466.1	71956	73988	R	ACA1_368180	complement(join(<71956..72008,72141..72244,72315..72463,72535..72627,72689..72849,72943..73106,73185..73514,73549..73720,73790..>73988))	Acanthamoeba castellanii str. Neff	14918908
ACA1_368190	mRNA	ACA1_368190	NW_004457466.1	74143	75019	D	ACA1_368190	join(<74143..74247,74346..74537,74618..74697,74765..74887,74971..>75019)	Acanthamoeba castellanii str. Neff	14918909
ACA1_368200	mRNA	ACA1_368200	NW_004457466.1	75177	78684	R	ACA1_368200	complement(join(<75177..75320,75401..75544,75611..75766,75874..76032,76112..76199,76269..76341,76425..76631,76729..76810,76885..77027,77149..77273,77416..77483,77560..77685,77815..77920,77989..78077,78214..78281,78358..78534,78624..>78684))	Acanthamoeba castellanii str. Neff	14918910
ACA1_368210	mRNA	ACA1_368210	NW_004457466.1	78806	80102	D	ACA1_368210	join(<78806..79853,79939..>80102)	Acanthamoeba castellanii str. Neff	14918911
ACA1_368220	mRNA	ACA1_368220	NW_004457466.1	80375	83364	R	ACA1_368220	complement(join(<80375..80823,80958..81339,81467..81597,81695..81896,81981..82196,82288..82761,82947..83102,83191..>83364))	Acanthamoeba castellanii str. Neff	14918912
ACA1_368230	mRNA	ACA1_368230	NW_004457466.1	83575	85978	R	ACA1_368230	complement(join(<83575..83896,84046..84177,84272..85074,85159..85448,85534..85669,85736..>85978))	Acanthamoeba castellanii str. Neff	14918913
ACA1_368240	mRNA	ACA1_368240	NW_004457466.1	86299	88264	D	ACA1_368240	join(<86299..86495,86555..86826,86924..87018,87185..87226,87315..87606,87693..87904,87968..88077,88162..>88264)	Acanthamoeba castellanii str. Neff	14918914
ACA1_368250	mRNA	ACA1_368250	NW_004457466.1	88366	90777	R	ACA1_368250	complement(join(<88366..88463,88556..88688,88764..88835,88907..89013,89092..89166,89244..89375,89467..89583,89669..89808,89881..89970,90052..90161,90269..90320,90390..90501,90594..>90777))	Acanthamoeba castellanii str. Neff	14918915
ACA1_368260	mRNA	ACA1_368260	NW_004457466.1	91966	95898	D	ACA1_368260	join(<91966..92431,92500..92710,92786..92942,93015..93149,93221..93875,93963..94105,94176..94327,94379..94494,94569..94724,94791..94962,95040..95232,95299..95362,95434..95603,95668..>95898)	Acanthamoeba castellanii str. Neff	14918916
ACA1_368270	mRNA	ACA1_368270	NW_004457466.1	96623	101034	D	ACA1_368270	join(<96623..96745,96818..96959,97062..97475,97518..97741,97816..97940,98022..98188,98251..98355,98417..98492,98503..98641,98711..98806,98883..99117,99171..99357,99440..100271,100347..100417,100491..100583,100675..100828,100891..>101034)	Acanthamoeba castellanii str. Neff	14918917
ACA1_368280	mRNA	ACA1_368280	NW_004457466.1	101257	110878	D	ACA1_368280	join(<101257..101551,101697..101786,101849..101950,102088..102210,102322..102444,102566..102672,102774..102915,102994..103137,103225..103332,103454..103615,103709..103828,103913..104080,104177..104302,104384..104518,104601..104699,104762..105292,105381..105559,105642..105729,105800..107609,107701..107711,107732..108403,108472..108776,108861..108984,109052..109206,109300..109425,109511..109711,109784..109910,110029..110135,110276..110392,110465..110569,110684..>110878)	Acanthamoeba castellanii str. Neff	14918918
ACA1_368290	mRNA	ACA1_368290	NW_004457466.1	111432	113524	D	ACA1_368290	join(<111432..112496,112606..112703,112870..112958,113044..113185,113256..113329,113424..>113524)	Acanthamoeba castellanii str. Neff	14918919
ACA1_368300	mRNA	ACA1_368300	NW_004457466.1	113662	116432	R	ACA1_368300	complement(join(<113662..113748,113810..113940,114031..114111,114186..114366,114502..114585,114688..114762,114930..115063,115136..115203,115317..115415,115525..115649,115741..115984,116062..116227,116318..>116432))	Acanthamoeba castellanii str. Neff	14918920
ACA1_368310	mRNA	ACA1_368310	NW_004457466.1	116531	117376	R	ACA1_368310	complement(join(<116531..116976,117079..117112,117176..>117376))	Acanthamoeba castellanii str. Neff	14918921
ACA1_368320	mRNA	ACA1_368320	NW_004457466.1	117532	119244	R	ACA1_368320	complement(join(<117532..117702,117797..118042,118122..118204,118287..118468,118557..118681,118777..118833,118915..>119244))	Acanthamoeba castellanii str. Neff	14918922
ACA1_368430	mRNA	ACA1_368430	NW_004457466.1	120571	122079	R	ACA1_368430	complement(join(<120571..120592,120793..120859,121000..121119,121204..121321,121400..121527,121625..121755,121871..>122079))	Acanthamoeba castellanii str. Neff	14918923
ACA1_368550	mRNA	ACA1_368550	NW_004457466.1	126778	127796	D	ACA1_368550	join(<126778..126847,126860..126927,127044..127129,127202..>127796)	Acanthamoeba castellanii str. Neff	14918925
ACA1_368560	mRNA	ACA1_368560	NW_004457466.1	128404	132813	R	ACA1_368560	complement(join(<128404..128461,128573..128767,129094..130080,130173..130465,130581..130757,130887..131083,131192..131306,131408..131489,131597..131733,131832..132020,132079..132224,132323..132371,132484..132648,132715..>132813))	Acanthamoeba castellanii str. Neff	14918926
ACA1_368670	mRNA	ACA1_368670	NW_004457466.1	133406	135046	R	ACA1_368670	complement(join(<133406..133515,133663..133824,133905..134063,134143..134221,134288..134366,134429..134510,134776..>135046))	Acanthamoeba castellanii str. Neff	14918927
ACA1_368680	mRNA	ACA1_368680	NW_004457466.1	135132	138638	R	ACA1_368680	complement(join(<135132..135444,135518..135825,135920..136000,136094..136202,136291..136403,136488..136656,136725..136842,136917..137043,137113..137267,137350..137444,137543..137709,137774..137962,138097..138237,138324..138379,138458..>138638))	Acanthamoeba castellanii str. Neff	14918928
ACA1_368690	mRNA	ACA1_368690	NW_004457466.1	139005	139954	R	ACA1_368690	complement(join(<139005..139085,139178..139279,139343..139431,139493..139566,139628..139793,139894..>139954))	Acanthamoeba castellanii str. Neff	14918929
ACA1_368700	mRNA	ACA1_368700	NW_004457466.1	140122	141285	R	ACA1_368700	complement(join(<140122..140250,140315..140516,140597..140703,140790..140966,141053..141165,141243..>141285))	Acanthamoeba castellanii str. Neff	14918930
ACA1_368710	mRNA	ACA1_368710	NW_004457466.1	141383	144034	D	ACA1_368710	join(<141383..141515,141642..141742,141835..141946,142029..142185,142218..142300,142396..142466,142544..142674,142782..142885,142971..143272,143424..143850,143937..>144034)	Acanthamoeba castellanii str. Neff	14918931
ACA1_368720	mRNA	ACA1_368720	NW_004457466.1	144122	148483	R	ACA1_368720	complement(join(<144122..144457,144572..144715,144806..144961,145061..145153,145306..145464,145558..145934,146044..146233,146359..146860,146991..>148483))	Acanthamoeba castellanii str. Neff	14918932
ACA1_368730	mRNA	ACA1_368730	NW_004457466.1	148924	150443	R	ACA1_368730	complement(join(<148924..148987,149089..149257,149359..149718,149810..149914,149998..150183,150281..>150443))	Acanthamoeba castellanii str. Neff	14918933
ACA1_368740	mRNA	ACA1_368740	NW_004457466.1	151054	153631	D	ACA1_368740	join(<151054..151740,151868..151992,152141..152204,152320..152608,152726..152947,153057..153353,153423..>153631)	Acanthamoeba castellanii str. Neff	14919072
ACA1_368750	mRNA	ACA1_368750	NW_004457466.1	153818	154702	R	ACA1_368750	complement(join(<153818..154294,154375..154488,154556..>154702))	Acanthamoeba castellanii str. Neff	14919073
ACA1_368760	mRNA	ACA1_368760	NW_004457466.1	154972	155781	R	ACA1_368760	complement(join(<154972..155136,155260..155315,155384..155510,155595..155635,155742..>155781))	Acanthamoeba castellanii str. Neff	14919074
ACA1_368770	mRNA	ACA1_368770	NW_004457466.1	156119	159357	R	ACA1_368770	complement(join(<156119..156337,156408..156783,156853..157034,157107..157312,157399..157495,157573..157685,157758..157874,157951..158083,158157..158287,158381..158587,158669..158727,158806..158958,158987..>159357))	Acanthamoeba castellanii str. Neff	14919075
ACA1_368780	mRNA	ACA1_368780	NW_004457466.1	160057	161529	R	ACA1_368780	complement(join(<160057..160237,160297..160391,160520..160564,160634..160739,160819..161011,161073..161158,161238..161289,161385..>161529))	Acanthamoeba castellanii str. Neff	14919076
ACA1_368790	mRNA	ACA1_368790	NW_004457466.1	162216	165008	D	ACA1_368790	join(<162216..162584,162762..162884,162964..163320,163398..163548,163634..163790,163892..164127,164198..164352,164421..164558,164637..164760,164821..>165008)	Acanthamoeba castellanii str. Neff	14919077
ACA1_368800	mRNA	ACA1_368800	NW_004457466.1	165453	166846	D	ACA1_368800	join(<165453..165640,165732..165901,166010..166210,166302..>166846)	Acanthamoeba castellanii str. Neff	14919078
ACA1_368810	mRNA	ACA1_368810	NW_004457466.1	167075	168695	D	ACA1_368810	join(<167075..167323,167396..167557,167624..167675,167744..167840,167917..168068,168161..168218,168284..168342,168418..>168695)	Acanthamoeba castellanii str. Neff	14919079
ACA1_368820	mRNA	ACA1_368820	NW_004457466.1	168921	170517	D	ACA1_368820	join(<168921..168939,169130..>170517)	Acanthamoeba castellanii str. Neff	14919080
ACA1_368830	mRNA	ACA1_368830	NW_004457466.1	170648	171883	R	ACA1_368830	complement(join(<170648..170793,170879..170918,171001..171109,171189..171268,171364..171550,171615..171685,171737..>171883))	Acanthamoeba castellanii str. Neff	14919081
ACA1_368840	mRNA	ACA1_368840	NW_004457466.1	172352	172819	D	ACA1_368840	join(<172352..172534,172571..>172819)	Acanthamoeba castellanii str. Neff	14919082
ACA1_368850	mRNA	ACA1_368850	NW_004457466.1	173463	176847	D	ACA1_368850	join(<173463..173577,173672..173737,173837..174050,174082..174170,174260..174382,174464..174549,174624..174749,174838..175061,175144..175299,175383..175550,175627..176098,176196..176538,176633..>176847)	Acanthamoeba castellanii str. Neff	14919083
ACA1_368860	mRNA	ACA1_368860	NW_004457466.1	177181	177999	D	ACA1_368860	join(<177181..177530,177654..>177999)	Acanthamoeba castellanii str. Neff	14919084
ACA1_368870	mRNA	ACA1_368870	NW_004457466.1	178133	180344	R	ACA1_368870	complement(join(<178133..178208,178257..178362,178484..178546,178614..178736,178818..179047,179160..179338,179425..179579,179666..>180344))	Acanthamoeba castellanii str. Neff	14919085
ACA1_368880	mRNA	ACA1_368880	NW_004457466.1	180659	182926	D	ACA1_368880	join(<180659..181158,181238..181367,181495..181613,181713..182110,182188..182711,182792..>182926)	Acanthamoeba castellanii str. Neff	14919086
ACA1_368890	mRNA	ACA1_368890	NW_004457466.1	183021	187622	D	ACA1_368890	join(<183021..183228,183365..183469,183563..183730,183816..184113,184179..184417,184489..184586,184648..184698,184780..184902,184981..185180,185262..185416,185504..185595,185662..185754,185821..186039,186239..186324,186406..186484,186573..186959,187029..187230,187304..187407,187449..>187622)	Acanthamoeba castellanii str. Neff	14919087
ACA1_368900	mRNA	ACA1_368900	NW_004457466.1	188176	192062	D	ACA1_368900	join(<188176..188297,188377..188499,188753..188868,188950..189030,189138..189290,189323..189600,189628..189886,189976..190123,190499..190560,190651..190757,190832..190952,191026..191301,191374..>192062)	Acanthamoeba castellanii str. Neff	14919088
ACA1_368910	mRNA	ACA1_368910	NW_004457466.1	192231	196562	D	ACA1_368910	join(<192231..192925,193127..193214,193307..193379,193449..193582,193687..193837,193961..194058,194118..194186,194268..194325,194436..194554,194644..194711,194840..195113,195284..195469,195559..195761,195872..196169,196239..>196562)	Acanthamoeba castellanii str. Neff	14919089
ACA1_368920	mRNA	ACA1_368920	NW_004457466.1	196852	199349	D	ACA1_368920	join(<196852..197085,197174..197257,197332..197430,197531..197754,197823..197938,198178..198232,198335..198507,198590..198679,198744..198842,198938..199216,199300..>199349)	Acanthamoeba castellanii str. Neff	14919090
ACA1_368930	mRNA	ACA1_368930	NW_004457466.1	199475	200101	R	ACA1_368930	complement(<199475..>200101)	Acanthamoeba castellanii str. Neff	14919091
ACA1_368940	mRNA	ACA1_368940	NW_004457466.1	201021	202693	D	ACA1_368940	join(<201021..201056,201102..201206,201296..201386,201484..201562,201633..201724,201805..201937,202025..202184,202291..202389,202468..202545,202619..>202693)	Acanthamoeba castellanii str. Neff	14919092
ACA1_368950	mRNA	ACA1_368950	NW_004457466.1	202901	204021	R	ACA1_368950	complement(join(<202901..203224,203298..203432,203457..203846,203923..>204021))	Acanthamoeba castellanii str. Neff	14919093
ACA1_368960	mRNA	ACA1_368960	NW_004457466.1	204252	204620	R	ACA1_368960	complement(<204252..>204620)	Acanthamoeba castellanii str. Neff	14919094
ACA1_368970	mRNA	ACA1_368970	NW_004457466.1	204766	206719	R	ACA1_368970	complement(join(<204766..204867,204963..205048,205118..205298,205370..205549,205651..205711,205813..206033,206113..206231,206309..206398,206587..>206719))	Acanthamoeba castellanii str. Neff	14919095
ACA1_368980	mRNA	ACA1_368980	NW_004457466.1	206933	211234	R	ACA1_368980	complement(join(<206933..206967,207062..207225,207303..207450,207532..207611,207735..208036,208153..208220,208309..208606,208677..208803,208984..209360,209432..209613,209683..209811,209885..209997,210099..211008,211147..>211234))	Acanthamoeba castellanii str. Neff	14919096
ACA1_368990	mRNA	ACA1_368990	NW_004457466.1	211761	212991	D	ACA1_368990	join(<211761..211927,211989..212050,212115..212291,212382..212876,212954..>212991)	Acanthamoeba castellanii str. Neff	14919097
ACA1_369000	mRNA	ACA1_369000	NW_004457466.1	213087	214053	R	ACA1_369000	complement(join(<213087..213295,213412..213618,213699..213815,213924..>214053))	Acanthamoeba castellanii str. Neff	14919098
ACA1_369010	mRNA	ACA1_369010	NW_004457466.1	214305	224104	R	ACA1_369010	complement(join(<214305..214386,214469..214603,214687..214777,214845..215010,215104..215209,215294..215501,215562..215713,215784..215921,216004..216051,216121..216533,216557..216718,216808..216922,217003..217116,217189..217346,217426..217544,217604..217864,217953..218073,218139..218285,218365..218458,218545..218665,218763..219013,219087..219210,219280..219447,219525..219687,219751..219889,219954..220152,220215..220308,220372..220525,220599..220752,220826..220976,221047..221173,221250..221479,221579..221887,221964..222107,222179..222360,222433..222448,222466..222624,222692..222856,222921..223011,223083..223248,223311..223468,223531..223685,223766..223858,223922..223981,224045..>224104))	Acanthamoeba castellanii str. Neff	14919099
ACA1_369020	mRNA	ACA1_369020	NW_004457466.1	224621	225255	D	ACA1_369020	join(<224621..224927,225056..>225255)	Acanthamoeba castellanii str. Neff	14919100
ACA1_369030	mRNA	ACA1_369030	NW_004457466.1	225627	226676	R	ACA1_369030	complement(join(<225627..225830,225928..225957,226128..226220,226280..226375,226452..226526,226656..>226676))	Acanthamoeba castellanii str. Neff	14919101
ACA1_369040	mRNA	ACA1_369040	NW_004457466.1	226923	227802	R	ACA1_369040	complement(join(<226923..226988,227069..227158,227340..227419,227487..227621,227754..>227802))	Acanthamoeba castellanii str. Neff	14919102
ACA1_369050	mRNA	ACA1_369050	NW_004457466.1	227955	230337	D	ACA1_369050	join(<227955..228327,228479..228530,228617..228702,228821..229013,229112..229187,229244..229537,229596..229789,229883..230010,230068..230144,230239..>230337)	Acanthamoeba castellanii str. Neff	14919103
ACA1_369060	mRNA	ACA1_369060	NW_004457466.1	230418	230863	D	ACA1_369060	join(<230418..230440,230528..230677,230746..>230863)	Acanthamoeba castellanii str. Neff	14919104
ACA1_369070	mRNA	ACA1_369070	NW_004457466.1	230931	231347	R	ACA1_369070	complement(<230931..>231347)	Acanthamoeba castellanii str. Neff	14919105
ACA1_369080	mRNA	ACA1_369080	NW_004457466.1	231451	238748	R	ACA1_369080	complement(join(<231451..231666,231771..231969,232056..232249,232316..232645,232749..232880,232949..233236,233423..233528,233624..233757,233858..233957,234031..234126,234242..234387,234470..234717,234798..234915,234982..235256,235357..235438,235527..235688,235760..235864,235935..236084,236166..236276,236353..236475,236572..236672,236779..236936,237002..237242,237319..237457,237546..237664,237752..237837,237934..238086,238184..238311,238394..238638,238679..>238748))	Acanthamoeba castellanii str. Neff	14919106
ACA1_369090	mRNA	ACA1_369090	NW_004457466.1	238988	241891	R	ACA1_369090	complement(join(<238988..239056,239129..239265,239336..239462,239536..239655,239724..239798,239868..240044,240137..240241,240306..240376,240453..240580,240660..240703,240789..240941,241014..241067,241137..241226,241307..241476,241658..241760,241835..>241891))	Acanthamoeba castellanii str. Neff	14919107
ACA1_369100	mRNA	ACA1_369100	NW_004457466.1	242117	246373	D	ACA1_369100	join(<242117..242579,242660..242745,242810..242876,242965..243108,243182..243254,243323..243389,243463..243555,243642..243734,243809..243888,243974..244174,244252..244326,244391..244511,244604..244699,244776..245327,245415..245498,245571..245709,245772..>246373)	Acanthamoeba castellanii str. Neff	14919108
ACA1_369110	mRNA	ACA1_369110	NW_004457466.1	246611	246841	R	ACA1_369110	complement(<246611..>246841)	Acanthamoeba castellanii str. Neff	14919109
ACA1_369120	mRNA	ACA1_369120	NW_004457466.1	247234	248178	D	ACA1_369120	join(<247234..247552,247634..247786,247853..>248178)	Acanthamoeba castellanii str. Neff	14919110
ACA1_369130	mRNA	ACA1_369130	NW_004457466.1	248690	251862	D	ACA1_369130	join(<248690..248711,248756..248803,249124..249188,249686..249796,249810..249914,250073..250131,250196..250293,250355..250416,250447..250579,250641..250793,250863..251046,251127..251184,251366..251426,251505..251581,251698..>251862)	Acanthamoeba castellanii str. Neff	14919111
ACA1_369140	mRNA	ACA1_369140	NW_004457466.1	252018	256271	D	ACA1_369140	join(<252018..252231,252244..252344,252425..253077,253163..253853,253912..254173,254265..254455,254562..254642,254736..>256271)	Acanthamoeba castellanii str. Neff	14919112
ACA1_369150	mRNA	ACA1_369150	NW_004457466.1	256565	261041	R	ACA1_369150	complement(join(<256565..256904,256980..257222,257324..257732,257811..257943,258039..258275,258357..258608,258699..258780,258870..258949,259032..259154,259253..259392,259569..259646,259748..259871,259934..260165,260246..260353,260424..260530,260721..260806,260900..>261041))	Acanthamoeba castellanii str. Neff	14919113
ACA1_369160	mRNA	ACA1_369160	NW_004457466.1	261536	264418	D	ACA1_369160	join(<261536..261566,261864..261953,262066..262191,262260..262312,262395..262470,262550..262617,262687..262781,262848..262961,263041..263147,263212..263263,263329..263471,263542..263612,263680..263783,263847..263949,264016..264133,264200..264261,264332..>264418)	Acanthamoeba castellanii str. Neff	14918845
ACA1_369170	mRNA	ACA1_369170	NW_004457466.1	264570	265655	D	ACA1_369170	join(<264570..264682,264782..264848,264942..265051,265142..265231,265318..265418,265489..265583,265647..>265655)	Acanthamoeba castellanii str. Neff	14918846
ACA1_369180	mRNA	ACA1_369180	NW_004457466.1	266467	268067	D	ACA1_369180	join(<266467..267241,267360..267533,267603..267725,267788..267890,267968..>268067)	Acanthamoeba castellanii str. Neff	14918847
ACA1_369190	mRNA	ACA1_369190	NW_004457466.1	268413	270611	D	ACA1_369190	join(<268413..268491,268583..268776,268870..269034,269109..269245,269329..269362,269442..269580,269661..269764,269842..270050,270111..270426,270453..>270611)	Acanthamoeba castellanii str. Neff	14918848
ACA1_369200	mRNA	ACA1_369200	NW_004457466.1	270747	273754	R	ACA1_369200	complement(join(<270747..270901,270975..271043,271117..271186,271262..271537,271621..271871,271976..272105,272214..272356,272454..272601,272672..272780,272862..272940,272984..273040,273066..273152,273236..273306,273402..>273754))	Acanthamoeba castellanii str. Neff	14918849
ACA1_369210	mRNA	ACA1_369210	NW_004457466.1	273903	274199	R	ACA1_369210	complement(<273903..>274199)	Acanthamoeba castellanii str. Neff	14918850
ACA1_369220	mRNA	ACA1_369220	NW_004457466.1	274520	278089	R	ACA1_369220	complement(join(<274520..274621,274736..274857,274922..275111,275187..275252,275362..275402,275512..275603,275675..275763,275848..275979,276061..276186,276427..276502,276581..276732,276829..276942,277048..277122,277197..277274,277381..277605,277670..277791,277927..>278089))	Acanthamoeba castellanii str. Neff	14918851
ACA1_369230	mRNA	ACA1_369230	NW_004457466.1	278252	279701	R	ACA1_369230	complement(join(<278252..278700,278790..278921,279000..279404,279467..>279701))	Acanthamoeba castellanii str. Neff	14918852
ACA1_369240	mRNA	ACA1_369240	NW_004457466.1	279770	282918	R	ACA1_369240	complement(join(<279770..279950,280026..280121,280223..280409,280532..281105,281174..281278,281345..281512,281587..281688,281716..281777,281870..281962,282072..282199,282264..282403,282495..282565,282636..282750,282877..>282918))	Acanthamoeba castellanii str. Neff	14918853
ACA1_369250	mRNA	ACA1_369250	NW_004457466.1	283041	285075	R	ACA1_369250	complement(join(<283041..283142,283211..283405,283481..283660,283748..283879,283977..284174,284276..284326,284402..284556,284669..284759,284832..284903,285016..>285075))	Acanthamoeba castellanii str. Neff	14918854
ACA1_369260	mRNA	ACA1_369260	NW_004457466.1	285183	285809	D	ACA1_369260	join(<285183..285218,285319..285444,285510..285640,285764..>285809)	Acanthamoeba castellanii str. Neff	14918855
ACA1_369270	mRNA	ACA1_369270	NW_004457466.1	286193	287232	D	ACA1_369270	join(<286193..286334,286396..286464,286534..286599,286679..286757,286821..286917,286970..287038,287125..>287232)	Acanthamoeba castellanii str. Neff	14918856
ACA1_369280	mRNA	ACA1_369280	NW_004457466.1	287432	288592	R	ACA1_369280	complement(join(<287432..287888,287975..288192,288299..>288592))	Acanthamoeba castellanii str. Neff	14918857
ACA1_369290	mRNA	ACA1_369290	NW_004457466.1	288676	289413	R	ACA1_369290	complement(join(<288676..289265,289326..>289413))	Acanthamoeba castellanii str. Neff	14918858
ACA1_369300	mRNA	ACA1_369300	NW_004457466.1	289924	290550	D	ACA1_369300	<289924..>290550	Acanthamoeba castellanii str. Neff	14918859
ACA1_369310	mRNA	ACA1_369310	NW_004457466.1	290654	296932	R	ACA1_369310	complement(join(<290654..290806,290884..291049,291130..291471,291553..291661,291769..291913,291999..292172,292300..292446,292599..292624,292784..292794,292832..292884,292969..293222,293297..293430,293639..293748,293818..294305,294420..294599,294661..295049,295208..296803,296913..>296932))	Acanthamoeba castellanii str. Neff	14918860
ACA1_369320	mRNA	ACA1_369320	NW_004457466.1	297394	302251	D	ACA1_369320	join(<297394..297420,297666..297805,297918..298240,298374..298507,298614..298838,298941..299042,299140..299304,299343..299472,299545..299747,299867..299946,300053..300152,300265..300481,300593..300720,300813..301089,301179..301378,301506..301580,301662..301768,301866..301977,302078..>302251)	Acanthamoeba castellanii str. Neff	14918861
ACA1_369330	mRNA	ACA1_369330	NW_004457466.1	302477	303451	D	ACA1_369330	join(<302477..302542,302612..302657,302749..302810,302936..303009,303079..>303451)	Acanthamoeba castellanii str. Neff	14918862
ACA1_369340	mRNA	ACA1_369340	NW_004457466.1	304305	304576	R	ACA1_369340	complement(join(<304305..304388,304514..>304576))	Acanthamoeba castellanii str. Neff	14918863
ACA1_369360	mRNA	ACA1_369360	NW_004457466.1	306459	307421	D	ACA1_369360	join(<306459..306797,306924..307136,307152..>307421)	Acanthamoeba castellanii str. Neff	14919026
ACA1_369470	mRNA	ACA1_369470	NW_004457466.1	307911	309295	R	ACA1_369470	complement(join(<307911..308004,308104..308281,308372..308472,308499..308713,308906..309112,309218..>309295))	Acanthamoeba castellanii str. Neff	14919027
ACA1_369480	mRNA	ACA1_369480	NW_004457466.1	309670	310964	R	ACA1_369480	complement(join(<309670..309917,309997..310081,310165..310357,310436..310484,310564..310629,310775..310830,310939..>310964))	Acanthamoeba castellanii str. Neff	14919028
ACA1_369490	mRNA	ACA1_369490	NW_004457466.1	311282	312121	R	ACA1_369490	complement(join(<311282..311322,311404..311963,312114..>312121))	Acanthamoeba castellanii str. Neff	14919029
ACA1_369500	mRNA	ACA1_369500	NW_004457466.1	312436	316795	R	ACA1_369500	complement(join(<312436..312604,313057..313241,313262..313446,313563..313763,313844..313925,314038..314108,314196..314304,314436..314645,314727..314898,315018..315127,315255..315396,315516..315658,315756..315887,315961..316086,316206..316396,316524..316647,316763..>316795))	Acanthamoeba castellanii str. Neff	14919030
ACA1_369510	mRNA	ACA1_369510	NW_004457466.1	317288	320420	R	ACA1_369510	complement(join(<317288..317449,317554..317710,317799..317848,317888..318043,318188..318274,318414..318608,318683..318798,318888..319021,319112..319224,319297..319482,319651..319920,319987..320127,320211..>320420))	Acanthamoeba castellanii str. Neff	14919031
ACA1_369520	mRNA	ACA1_369520	NW_004457466.1	321081	321894	D	ACA1_369520	join(<321081..321665,321742..>321894)	Acanthamoeba castellanii str. Neff	14919032
ACA1_369530	mRNA	ACA1_369530	NW_004457466.1	322122	323987	R	ACA1_369530	complement(join(<322122..322198,322257..322431,322492..322752,322901..322919,322936..322979,323063..323108,323195..323351,323492..323605,323690..323822,323898..>323987))	Acanthamoeba castellanii str. Neff	14919033
ACA1_369540	mRNA	ACA1_369540	NW_004457466.1	324211	327072	R	ACA1_369540	complement(join(<324211..324303,324397..324500,324600..324708,324797..325252,325330..325488,325610..325687,325836..325995,326083..326246,326345..326521,326633..326704,326812..326874,326944..>327072))	Acanthamoeba castellanii str. Neff	14919034
ACA1_369550	mRNA	ACA1_369550	NW_004457466.1	327807	330438	D	ACA1_369550	join(<327807..327968,328054..328274,328422..328743,328834..328913,329000..329114,329198..329617,329767..329893,329978..330090,330168..330257,330349..>330438)	Acanthamoeba castellanii str. Neff	14919035
ACA1_369560	mRNA	ACA1_369560	NW_004457466.1	330676	333227	R	ACA1_369560	complement(join(<330676..331098,331182..331318,331401..331965,332077..332214,332295..332414,332489..332974,333037..333175,333208..>333227))	Acanthamoeba castellanii str. Neff	14919036
ACA1_369570	mRNA	ACA1_369570	NW_004457466.1	333350	334942	D	ACA1_369570	join(<333350..333541,333699..333908,334006..334097,334235..334407,334530..>334942)	Acanthamoeba castellanii str. Neff	14919037
ACA1_369580	mRNA	ACA1_369580	NW_004457466.1	335208	337930	D	ACA1_369580	join(<335208..335708,335850..335910,335979..336368,336463..337466,337583..337732,337805..>337930)	Acanthamoeba castellanii str. Neff	14919038
ACA1_369590	mRNA	ACA1_369590	NW_004457466.1	338117	342524	R	ACA1_369590	complement(join(<338117..338368,338442..338615,338706..338933,339038..339166,339245..339393,339506..339665,339755..339937,340030..340214,340350..340530,340644..340771,340859..341065,341204..341342,341464..341721,341797..341957,342087..342315,342441..>342524))	Acanthamoeba castellanii str. Neff	14919039
ACA1_369600	mRNA	ACA1_369600	NW_004457466.1	342747	343922	D	ACA1_369600	join(<342747..342879,343005..343077,343264..343336,343422..343551,343619..343722,343821..>343922)	Acanthamoeba castellanii str. Neff	14919040
ACA1_369610	mRNA	ACA1_369610	NW_004457466.1	344200	345937	D	ACA1_369610	join(<344200..344322,344454..344487,344576..344719,344821..344931,345022..345206,345298..345369,345461..345535,345611..345704,345807..>345937)	Acanthamoeba castellanii str. Neff	14919041
ACA1_369620	mRNA	ACA1_369620	NW_004457466.1	346084	346308	R	ACA1_369620	complement(<346084..>346308)	Acanthamoeba castellanii str. Neff	14919042
ACA1_369630	mRNA	ACA1_369630	NW_004457466.1	346452	346679	R	ACA1_369630	complement(<346452..>346679)	Acanthamoeba castellanii str. Neff	14919043
ACA1_369640	mRNA	ACA1_369640	NW_004457466.1	346861	348544	D	ACA1_369640	join(<346861..347277,347370..347522,347618..347695,347802..347861,347946..348108,348230..348297,348371..>348544)	Acanthamoeba castellanii str. Neff	14919044
ACA1_369650	mRNA	ACA1_369650	NW_004457466.1	349338	350370	D	ACA1_369650	join(<349338..349596,349662..349834,349907..350048,350126..>350370)	Acanthamoeba castellanii str. Neff	14919045
ACA1_369660	mRNA	ACA1_369660	NW_004457466.1	350461	353307	R	ACA1_369660	complement(join(<350461..350666,350761..350925,350998..351159,351235..351757,351869..352058,352152..352305,352422..352567,352600..352784,352884..353119,353214..>353307))	Acanthamoeba castellanii str. Neff	14919046
ACA1_369670	mRNA	ACA1_369670	NW_004457466.1	353845	359756	D	ACA1_369670	join(<353845..354048,354220..354316,354406..354608,354677..354866,354945..355221,355319..355417,355510..355615,355699..355803,355868..356011,356094..356339,356454..356597,356697..356788,356886..357261,357357..357488,357651..357794,357864..357991,358151..358355,358447..358554,358629..358750,358822..358933,359017..359196,359265..359372,359451..359525,359586..>359756)	Acanthamoeba castellanii str. Neff	14919047
ACA1_369680	mRNA	ACA1_369680	NW_004457466.1	360459	361440	D	ACA1_369680	join(<360459..360533,360703..360808,360876..361040,361126..361233,361316..>361440)	Acanthamoeba castellanii str. Neff	14919048
ACA1_369690	mRNA	ACA1_369690	NW_004457466.1	361660	362636	D	ACA1_369690	join(<361660..361948,362012..362196,362294..362410,362496..>362636)	Acanthamoeba castellanii str. Neff	14919049
ACA1_369700	mRNA	ACA1_369700	NW_004457466.1	362790	364361	R	ACA1_369700	complement(join(<362790..363003,363139..363324,363449..363718,363825..363877,364053..>364361))	Acanthamoeba castellanii str. Neff	14918964
ACA1_369710	mRNA	ACA1_369710	NW_004457466.1	365195	367274	D	ACA1_369710	join(<365195..365398,365531..365819,365929..366147,366253..366373,366470..>367274)	Acanthamoeba castellanii str. Neff	14918965
ACA1_369720	mRNA	ACA1_369720	NW_004457466.1	367409	368778	R	ACA1_369720	complement(join(<367409..367484,367580..367695,367745..367826,367920..367996,368045..368110,368251..368301,368380..368437,368523..368585,368717..>368778))	Acanthamoeba castellanii str. Neff	14918966
ACA1_369730	mRNA	ACA1_369730	NW_004457466.1	369055	370607	R	ACA1_369730	complement(join(<369055..369380,369454..369590,369679..369813,369901..370024,370114..370222,370330..370437,370533..>370607))	Acanthamoeba castellanii str. Neff	14918967
ACA1_369740	mRNA	ACA1_369740	NW_004457466.1	371143	372598	R	ACA1_369740	complement(join(<371143..371337,371426..371537,371610..371655,371729..371852,371918..372043,372146..372227,372303..>372598))	Acanthamoeba castellanii str. Neff	14918968
ACA1_369750	mRNA	ACA1_369750	NW_004457466.1	372874	373708	D	ACA1_369750	join(<372874..372951,373014..373112,373210..373290,373390..373493,373567..>373708)	Acanthamoeba castellanii str. Neff	14918969
ACA1_369760	mRNA	ACA1_369760	NW_004457466.1	374215	375002	D	ACA1_369760	join(<374215..374324,374433..374743,374863..>375002)	Acanthamoeba castellanii str. Neff	14918970
ACA1_369770	mRNA	ACA1_369770	NW_004457466.1	375181	377114	R	ACA1_369770	complement(join(<375181..375424,375506..375608,375679..375825,375896..376042,376088..376260,376371..376543,376616..376769,377071..>377114))	Acanthamoeba castellanii str. Neff	14918971
ACA1_369780	mRNA	ACA1_369780	NW_004457466.1	377228	377572	R	ACA1_369780	complement(join(<377228..377415,377521..>377572))	Acanthamoeba castellanii str. Neff	14918972
ACA1_369790	mRNA	ACA1_369790	NW_004457466.1	378525	378908	D	ACA1_369790	join(<378525..378604,378681..378836,378854..>378908)	Acanthamoeba castellanii str. Neff	14918973
ACA1_369800	mRNA	ACA1_369800	NW_004457466.1	378999	381077	R	ACA1_369800	complement(join(<378999..379186,379292..379384,379479..379547,379620..379716,379809..379957,380065..380175,380282..380355,380436..380610,380771..>381077))	Acanthamoeba castellanii str. Neff	14918974
ACA1_369810	mRNA	ACA1_369810	NW_004457466.1	381475	384600	D	ACA1_369810	join(<381475..381726,381798..382053,382139..382344,382456..382586,382688..382820,382949..383053,383158..383246,383339..383394,383551..383666,383748..383864,383968..>384600)	Acanthamoeba castellanii str. Neff	14918975
ACA1_369820	mRNA	ACA1_369820	NW_004457466.1	384675	387635	R	ACA1_369820	complement(join(<384675..384752,384843..384943,385018..385125,385263..385402,385479..385611,385728..385786,385890..386030,386123..386334,386418..386548,386660..386761,386851..386877,386991..387204,387334..387402,387534..>387635))	Acanthamoeba castellanii str. Neff	14918976
ACA1_369830	mRNA	ACA1_369830	NW_004457466.1	387844	388821	D	ACA1_369830	join(<387844..387867,387901..387966,388035..388092,388172..388275,388371..388593,388670..>388821)	Acanthamoeba castellanii str. Neff	14918977
ACA1_369840	mRNA	ACA1_369840	NW_004457466.1	389024	392040	R	ACA1_369840	complement(join(<389024..389407,389497..389774,389867..389977,390071..390175,390251..390455,390538..390761,390854..390978,391052..391254,391286..391599,391701..391853,391977..>392040))	Acanthamoeba castellanii str. Neff	14918978
ACA1_369850	mRNA	ACA1_369850	NW_004457466.1	392551	396237	R	ACA1_369850	complement(join(<392551..392757,392836..392999,393096..393246,393331..393444,393552..393674,393766..393934,394059..394244,394338..394487,394569..394798,394884..394993,395106..395233,395312..395379,395447..395580,395663..395768,395844..396055,396132..>396237))	Acanthamoeba castellanii str. Neff	14918979
ACA1_369860	mRNA	ACA1_369860	NW_004457466.1	397076	397733	D	ACA1_369860	join(<397076..397192,397265..397360,397436..397576,397647..>397733)	Acanthamoeba castellanii str. Neff	14918980
ACA1_369870	mRNA	ACA1_369870	NW_004457466.1	397968	399866	R	ACA1_369870	complement(join(<397968..398000,398082..398160,398236..398483,398557..398776,398872..398969,399069..399296,399398..399697,399777..>399866))	Acanthamoeba castellanii str. Neff	14918981
ACA1_369880	mRNA	ACA1_369880	NW_004457466.1	400034	402053	D	ACA1_369880	join(<400034..400121,400236..400264,400334..400493,400569..400671,400767..400911,401013..401048,401135..401233,401306..401481,401558..401681,401758..401970,402039..>402053)	Acanthamoeba castellanii str. Neff	14918982
ACA1_369890	mRNA	ACA1_369890	NW_004457466.1	402277	403024	R	ACA1_369890	complement(join(<402277..402418,402493..402644,402704..402776,402847..402895,402973..>403024))	Acanthamoeba castellanii str. Neff	14918983
ACA1_369900	mRNA	ACA1_369900	NW_004457466.1	403207	404556	D	ACA1_369900	join(<403207..404006,404104..404254,404359..>404556)	Acanthamoeba castellanii str. Neff	14918984
ACA1_369910	mRNA	ACA1_369910	NW_004457466.1	404916	405374	D	ACA1_369910	<404916..>405374	Acanthamoeba castellanii str. Neff	14918985
ACA1_369920	mRNA	ACA1_369920	NW_004457466.1	405548	410439	R	ACA1_369920	complement(join(<405548..405655,405741..405794,405875..405999,406756..406798,406894..406947,407043..407167,407266..407383,407545..407654,407671..407683,407792..407904,408055..408148,408214..408379,408466..408623,408656..408754,408879..409098,409180..409326,409412..409514,409598..409812,409923..410053,410236..>410439))	Acanthamoeba castellanii str. Neff	14919050
ACA1_370030	mRNA	ACA1_370030	NW_004457466.1	410575	411132	D	ACA1_370030	join(<410575..410580,410665..410731,410851..410899,410988..>411132)	Acanthamoeba castellanii str. Neff	14919051
ACA1_370040	mRNA	ACA1_370040	NW_004457466.1	411230	415557	R	ACA1_370040	complement(join(<411230..411354,411450..411594,411685..412161,412235..412344,412410..412530,412621..412805,412937..413089,413189..413386,413492..413713,413878..413982,414080..414119,414203..414336,414436..414563,414648..414749,414811..414937,415023..>415557))	Acanthamoeba castellanii str. Neff	14919052
ACA1_370050	mRNA	ACA1_370050	NW_004457466.1	415635	420500	R	ACA1_370050	complement(join(<415635..415919,415988..416161,416244..416960,417058..417312,417389..417667,417746..418008,418073..418181,418254..418493,418564..419640,419717..420058,420120..420311,420387..>420500))	Acanthamoeba castellanii str. Neff	14919053
ACA1_370060	mRNA	ACA1_370060	NW_004457466.1	420850	428006	D	ACA1_370060	join(<420850..421299,421464..>428006)	Acanthamoeba castellanii str. Neff	14919054
ACA1_370070	mRNA	ACA1_370070	NW_004457466.1	428996	431845	D	ACA1_370070	join(<428996..429735,429866..430107,430192..430411,430514..430630,430738..430847,430935..431155,431247..431455,431526..431583,431663..>431845)	Acanthamoeba castellanii str. Neff	14919055
ACA1_370080	mRNA	ACA1_370080	NW_004457466.1	431964	435470	R	ACA1_370080	complement(join(<431964..432155,432268..432521,432639..432803,432882..433014,433103..433173,433234..433330,433430..433686,433788..433990,434053..434194,434303..434473,434529..434678,434765..434896,434984..435113,435202..435231,435336..>435470))	Acanthamoeba castellanii str. Neff	14919056
ACA1_370090	mRNA	ACA1_370090	NW_004457466.1	435627	436813	R	ACA1_370090	complement(join(<435627..435762,435854..435984,436061..436176,436265..436370,436448..436507,436584..436653,436737..>436813))	Acanthamoeba castellanii str. Neff	14919057
ACA1_370100	mRNA	ACA1_370100	NW_004457466.1	436972	438238	D	ACA1_370100	join(<436972..437116,437159..437388,437503..437575,437691..>438238)	Acanthamoeba castellanii str. Neff	14919058
ACA1_370110	mRNA	ACA1_370110	NW_004457466.1	438275	439977	D	ACA1_370110	join(<438275..438461,438528..438670,438740..438854,438958..439121,439186..439320,439407..439523,439636..>439977)	Acanthamoeba castellanii str. Neff	14919059
ACA1_370120	mRNA	ACA1_370120	NW_004457466.1	440255	442398	D	ACA1_370120	join(<440255..440299,440588..440717,440796..440999,441103..441225,441304..441396,441505..441594,441702..441803,441876..442166,442283..>442398)	Acanthamoeba castellanii str. Neff	14919060
ACA1_370140	mRNA	ACA1_370140	NW_004457466.1	446362	449310	D	ACA1_370140	join(<446362..446462,446567..446693,446824..447025,447136..447318,447416..447728,447814..447962,448042..448091,448166..448368,448430..448611,448700..448919,448995..>449310)	Acanthamoeba castellanii str. Neff	14919062
ACA1_370150	mRNA	ACA1_370150	NW_004457466.1	450423	451952	D	ACA1_370150	join(<450423..450489,450548..450911,450981..451074,451155..451333,451422..451551,451638..>451952)	Acanthamoeba castellanii str. Neff	14919063
ACA1_370160	mRNA	ACA1_370160	NW_004457466.1	452220	452495	D	ACA1_370160	join(<452220..452232,452260..>452495)	Acanthamoeba castellanii str. Neff	14919064
ACA1_370170	mRNA	ACA1_370170	NW_004457466.1	453162	454376	D	ACA1_370170	join(<453162..453534,453646..453775,453845..453935,454017..454188,454297..>454376)	Acanthamoeba castellanii str. Neff	14919065
ACA1_370180	mRNA	ACA1_370180	NW_004457466.1	454517	457496	D	ACA1_370180	join(<454517..454727,454867..454951,455094..455160,455274..455368,455460..455530,455626..455805,455887..455988,456107..456220,456315..456407,456499..456621,456710..456791,456896..457101,457178..457325,457412..>457496)	Acanthamoeba castellanii str. Neff	14919066
ACA1_370190	mRNA	ACA1_370190	NW_004457466.1	457633	458826	R	ACA1_370190	complement(join(<457633..457796,457951..458128,458203..458306,458384..458486,458576..458658,458766..458790,458818..>458826))	Acanthamoeba castellanii str. Neff	14919067
ACA1_370200	mRNA	ACA1_370200	NW_004457466.1	459082	462890	R	ACA1_370200	complement(join(<459082..459276,459393..459554,459638..459738,459830..459921,460012..460153,460262..460341,460440..460513,460611..460742,460817..460893,461048..461237,461344..461427,461560..461619,461692..461829,462030..462113,462184..462296,462393..462443,462597..462746,462866..>462890))	Acanthamoeba castellanii str. Neff	14919068
ACA1_370210	mRNA	ACA1_370210	NW_004457466.1	463380	466190	D	ACA1_370210	join(<463380..463447,463578..463951,464080..464165,464319..464487,464509..464646,464780..465379,465449..465592,465795..465873,465958..466017,466109..>466190)	Acanthamoeba castellanii str. Neff	14919069
ACA1_370220	mRNA	ACA1_370220	NW_004457466.1	466824	468517	D	ACA1_370220	join(<466824..468277,468295..>468517)	Acanthamoeba castellanii str. Neff	14919070
ACA1_370230	mRNA	ACA1_370230	NW_004457466.1	468666	469613	R	ACA1_370230	complement(join(<468666..468935,469053..469166,469281..469339,469433..>469613))	Acanthamoeba castellanii str. Neff	14919071
ACA1_370240	mRNA	ACA1_370240	NW_004457466.1	470611	471836	R	ACA1_370240	complement(join(<470611..470656,470751..470884,470957..471139,471197..471253,471320..471423,471497..471695,471756..>471836))	Acanthamoeba castellanii str. Neff	14919000
ACA1_370250	mRNA	ACA1_370250	NW_004457466.1	472361	473201	D	ACA1_370250	join(<472361..472419,472479..472566,472622..472766,472834..472953,473020..>473201)	Acanthamoeba castellanii str. Neff	14919001
ACA1_370260	mRNA	ACA1_370260	NW_004457466.1	473544	478575	D	ACA1_370260	join(<473544..473719,473854..473934,474006..474072,474154..474239,474328..474458,474536..474621,474867..474962,475066..475196,475270..475369,475407..475643,475686..475755,475825..475867,475879..475962,476018..476049,476134..476297,476379..476507,476589..476855,476921..477117,477228..477288,477580..477660,477800..477855,477949..477985,478055..478150,478284..478354,478443..>478575)	Acanthamoeba castellanii str. Neff	14919002
ACA1_370270	mRNA	ACA1_370270	NW_004457466.1	478680	485553	R	ACA1_370270	complement(join(<478680..478935,479013..479293,479396..479505,479648..479822,480089..480162,480273..480345,480556..480645,480737..480854,480898..481286,481380..481663,481725..481833,481927..482142,482216..482357,482454..482587,482692..482839,482912..483100,483280..483463,483530..483603,483686..484085,484156..484286,484371..484501,484595..484723,484815..484979,485062..485187,485262..485353,485433..>485553))	Acanthamoeba castellanii str. Neff	14919003
ACA1_370280	mRNA	ACA1_370280	NW_004457466.1	486101	487137	D	ACA1_370280	join(<486101..486208,486281..486764,486838..486918,487046..>487137)	Acanthamoeba castellanii str. Neff	14919004
ACA1_370290	mRNA	ACA1_370290	NW_004457466.1	487753	488874	R	ACA1_370290	complement(join(<487753..487881,488046..488180,488293..488402,488612..488756,488857..>488874))	Acanthamoeba castellanii str. Neff	14919005
ACA1_370300	mRNA	ACA1_370300	NW_004457466.1	489296	491428	R	ACA1_370300	complement(join(<489296..489361,489447..489520,489591..489711,489780..490213,490275..490379,490457..490504,490579..490668,490744..490881,490982..491066,491173..491259,491420..>491428))	Acanthamoeba castellanii str. Neff	14919006
ACA1_370310	mRNA	ACA1_370310	NW_004457466.1	491700	497508	D	ACA1_370310	join(<491700..492345,492357..492414,492487..492695,492791..492868,492939..492992,493081..493182,493254..493316,493397..493469,493545..493635,493702..493734,493815..493897,493987..494115,494210..494354,494378..494418,494432..494512,494613..494704,494809..494946,495035..495236,495284..495426,495537..495633,495717..495847,495876..495905,495918..496002,496115..496245,496324..496688,496797..496850,496991..497064,497142..497250,497365..>497508)	Acanthamoeba castellanii str. Neff	14919007
ACA1_370320	mRNA	ACA1_370320	NW_004457466.1	497646	498603	D	ACA1_370320	join(<497646..497966,498078..498197,498310..>498603)	Acanthamoeba castellanii str. Neff	14919008
ACA1_370330	mRNA	ACA1_370330	NW_004457466.1	498664	503752	R	ACA1_370330	complement(join(<498664..499636,499705..500041,500714..501066,501080..501353,501368..502007,502049..502123,502138..502299,502315..502482,502591..502980,503015..503533,503645..>503752))	Acanthamoeba castellanii str. Neff	14919009
ACA1_370440	mRNA	ACA1_370440	NW_004457466.1	500234	500545	D	ACA1_370440	<500234..>500545	Acanthamoeba castellanii str. Neff	14919010
ACA1_370550	mRNA	ACA1_370550	NW_004457466.1	503887	504495	D	ACA1_370550	<503887..>504495	Acanthamoeba castellanii str. Neff	14919012
ACA1_370660	mRNA	ACA1_370660	NW_004457466.1	506212	506819	R	ACA1_370660	complement(join(<506212..506648,506717..>506819))	Acanthamoeba castellanii str. Neff	14919011
ACA1_370670	mRNA	ACA1_370670	NW_004457466.1	508091	508730	D	ACA1_370670	join(<508091..508446,508464..508590,508692..>508730)	Acanthamoeba castellanii str. Neff	14919013
ACA1_370780	mRNA	ACA1_370780	NW_004457466.1	512220	512660	D	ACA1_370780	<512220..>512660	Acanthamoeba castellanii str. Neff	14919014
ACA1_370790	mRNA	ACA1_370790	NW_004457466.1	513545	513784	R	ACA1_370790	complement(<513545..>513784)	Acanthamoeba castellanii str. Neff	14919015
ACA1_370800	mRNA	ACA1_370800	NW_004457466.1	513845	514123	R	ACA1_370800	complement(<513845..>514123)	Acanthamoeba castellanii str. Neff	14919016
ACA1_370910	mRNA	ACA1_370910	NW_004457466.1	514541	515354	D	ACA1_370910	join(<514541..514708,514779..514835,515142..515240,515322..>515354)	Acanthamoeba castellanii str. Neff	14919017
ACA1_370920	mRNA	ACA1_370920	NW_004457466.1	515495	516305	D	ACA1_370920	join(<515495..515612,515735..515873,516218..>516305)	Acanthamoeba castellanii str. Neff	14919018
ACA1_370930	mRNA	ACA1_370930	NW_004457466.1	518450	518965	R	ACA1_370930	complement(join(<518450..518631,518869..>518965))	Acanthamoeba castellanii str. Neff	14919019
ACA1_370940	mRNA	ACA1_370940	NW_004457466.1	519246	519540	R	ACA1_370940	complement(join(<519246..519393,519410..>519540))	Acanthamoeba castellanii str. Neff	14919020
ACA1_371060	mRNA	ACA1_371060	NW_004457466.1	520623	521458	R	ACA1_371060	complement(join(<520623..520640,521090..>521458))	Acanthamoeba castellanii str. Neff	14919022
ACA1_371070	mRNA	ACA1_371070	NW_004457466.1	522888	523625	D	ACA1_371070	join(<522888..523077,523114..523265,523434..>523625)	Acanthamoeba castellanii str. Neff	14919023
ACA1_371180	mRNA	ACA1_371180	NW_004457466.1	528631	528882	R	ACA1_371180	complement(<528631..>528882)	Acanthamoeba castellanii str. Neff	14919024
ACA1_371190	mRNA	ACA1_371190	NW_004457466.1	528981	529697	D	ACA1_371190	join(<528981..529304,529572..>529697)	Acanthamoeba castellanii str. Neff	14918934
ACA1_371200	mRNA	ACA1_371200	NW_004457466.1	529772	530379	D	ACA1_371200	join(<529772..530272,530290..>530379)	Acanthamoeba castellanii str. Neff	14918935
ACA1_371210	mRNA	ACA1_371210	NW_004457466.1	530481	530888	R	ACA1_371210	complement(join(<530481..530583,530653..>530888))	Acanthamoeba castellanii str. Neff	14918936
ACA1_371220	mRNA	ACA1_371220	NW_004457466.1	530970	531200	R	ACA1_371220	complement(<530970..>531200)	Acanthamoeba castellanii str. Neff	14918937
ACA1_371230	mRNA	ACA1_371230	NW_004457466.1	531266	531797	R	ACA1_371230	complement(join(<531266..531503,531679..>531797))	Acanthamoeba castellanii str. Neff	14918938
ACA1_371240	mRNA	ACA1_371240	NW_004457466.1	532056	532235	D	ACA1_371240	<532056..>532235	Acanthamoeba castellanii str. Neff	14918939
ACA1_371250	mRNA	ACA1_371250	NW_004457466.1	532960	533373	R	ACA1_371250	complement(join(<532960..533154,533260..>533373))	Acanthamoeba castellanii str. Neff	14918940
ACA1_371260	mRNA	ACA1_371260	NW_004457466.1	533449	534052	D	ACA1_371260	join(<533449..533766,533912..>534052)	Acanthamoeba castellanii str. Neff	14918941
ACA1_371270	mRNA	ACA1_371270	NW_004457466.1	534163	534639	R	ACA1_371270	complement(<534163..>534639)	Acanthamoeba castellanii str. Neff	14918942
ACA1_371280	mRNA	ACA1_371280	NW_004457466.1	534691	535283	R	ACA1_371280	complement(join(<534691..534933,534954..>535283))	Acanthamoeba castellanii str. Neff	14918943
ACA1_371290	mRNA	ACA1_371290	NW_004457466.1	535411	535934	D	ACA1_371290	join(<535411..535670,535709..>535934)	Acanthamoeba castellanii str. Neff	14918944
ACA1_371300	mRNA	ACA1_371300	NW_004457466.1	537913	538408	D	ACA1_371300	join(<537913..538229,538267..>538408)	Acanthamoeba castellanii str. Neff	14918945
ACA1_371310	mRNA	ACA1_371310	NW_004457466.1	538389	540703	R	ACA1_371310	complement(join(<538389..538760,538848..539423,539517..540046,540199..>540703))	Acanthamoeba castellanii str. Neff	14918946
ACA1_371320	mRNA	ACA1_371320	NW_004457466.1	541205	546318	R	ACA1_371320	complement(join(<541205..541333,541404..541464,541552..541691,541781..541916,542002..542083,542152..542240,542325..542425,542503..542580,542658..542794,542862..542981,543057..543618,543736..543794,543864..544044,544130..544220,544319..544386,544502..544573,544658..544895,544967..545088,545192..545645,545782..545852,545916..546018,546089..>546318))	Acanthamoeba castellanii str. Neff	14918947
ACA1_371330	mRNA	ACA1_371330	NW_004457466.1	546287	547626	D	ACA1_371330	join(<546287..546355,546606..546645,546720..546864,546958..547164,547233..>547626)	Acanthamoeba castellanii str. Neff	14918948
ACA1_371440	mRNA	ACA1_371440	NW_004457466.1	547782	548698	R	ACA1_371440	complement(join(<547782..547818,547955..548166,548291..548422,548585..>548698))	Acanthamoeba castellanii str. Neff	14918950
ACA1_371450	mRNA	ACA1_371450	NW_004457466.1	551656	552531	D	ACA1_371450	join(<551656..552095,552213..>552531)	Acanthamoeba castellanii str. Neff	14918949
ACA1_371460	mRNA	ACA1_371460	NW_004457466.1	552630	554383	R	ACA1_371460	complement(join(<552630..552756,552879..552931,553117..553274,553341..553494,553551..553640,553723..553835,553923..554127,554240..>554383))	Acanthamoeba castellanii str. Neff	14918951
ACA1_371570	mRNA	ACA1_371570	NW_004457466.1	554610	555099	D	ACA1_371570	join(<554610..554892,555014..>555099)	Acanthamoeba castellanii str. Neff	14918952
ACA1_371590	mRNA	ACA1_371590	NW_004457466.1	557377	558417	R	ACA1_371590	complement(join(<557377..557502,557564..557689,557799..557895,557999..558210,558349..>558417))	Acanthamoeba castellanii str. Neff	14918954
ACA1_371610	mRNA	ACA1_371610	NW_004457466.1	559713	562112	R	ACA1_371610	complement(join(<559713..559839,559954..560017,560081..560171,560280..560396,560516..560585,560705..560872,560887..560936,560965..561161,561420..561610,561679..561829,561926..>562112))	Acanthamoeba castellanii str. Neff	14918956
ACA1_371620	mRNA	ACA1_371620	NW_004457466.1	562477	565948	R	ACA1_371620	complement(join(<562477..563892,564140..564275,564372..564606,564948..565024,565125..565257,565401..565591,565651..565762,565843..>565948))	Acanthamoeba castellanii str. Neff	14918957
ACA1_371630	mRNA	ACA1_371630	NW_004457466.1	566297	567142	D	ACA1_371630	join(<566297..566364,566462..566677,566767..>567142)	Acanthamoeba castellanii str. Neff	14918958
ACA1_371640	mRNA	ACA1_371640	NW_004457466.1	567313	570154	D	ACA1_371640	join(<567313..567426,567508..567568,567646..567764,567844..568002,568089..568211,568311..568421,568513..568634,568839..568936,569032..569183,569320..569538,569579..569628,569736..569893,569976..>570154)	Acanthamoeba castellanii str. Neff	14918959
ACA1_371660	mRNA	ACA1_371660	NW_004457466.1	570755	572342	D	ACA1_371660	join(<570755..570875,570940..571027,571147..571275,571405..571551,571667..571828,571901..572082,572170..>572342)	Acanthamoeba castellanii str. Neff	14918961
ACA1_371670	mRNA	ACA1_371670	NW_004457466.1	572522	575992	R	ACA1_371670	complement(join(<572522..572686,572844..572994,573060..573259,573369..573468,573523..573662,573756..573874,573950..574031,574098..574195,574272..574365,574497..574873,575022..575301,575360..575758,575774..>575992))	Acanthamoeba castellanii str. Neff	14918962
ACA1_371680	mRNA	ACA1_371680	NW_004457466.1	576259	577839	R	ACA1_371680	complement(join(<576259..576882,576960..577079,577173..577349,577434..577564,577638..>577839))	Acanthamoeba castellanii str. Neff	14918963
ACA1_371700	mRNA	ACA1_371700	NW_004457466.1	581874	586357	R	ACA1_371700	complement(join(<581874..582510,582591..582676,582770..583054,583118..583165,583266..583300,583434..583620,583762..583957,584069..584166,584260..584407,584502..584659,584753..584794,584866..585048,585142..585217,585288..585573,585720..585804,585928..586002,586111..586194,586286..>586357))	Acanthamoeba castellanii str. Neff	14918866
ACA1_371710	mRNA	ACA1_371710	NW_004457466.1	586649	588087	R	ACA1_371710	complement(join(<586649..586749,586830..586920,586999..587073,587160..587255,587329..587403,587474..587791,587908..>588087))	Acanthamoeba castellanii str. Neff	14918867
ACA1_371730	mRNA	ACA1_371730	NW_004457466.1	594807	596282	D	ACA1_371730	join(<594807..595914,596002..>596282)	Acanthamoeba castellanii str. Neff	14918869
ACA1_371740	mRNA	ACA1_371740	NW_004457466.1	596762	598835	R	ACA1_371740	complement(join(<596762..596958,597047..597164,597223..597618,597731..597876,597989..598085,598200..598375,598489..598597,598707..>598835))	Acanthamoeba castellanii str. Neff	14918870
ACA1_371750	mRNA	ACA1_371750	NW_004457466.1	599112	599527	D	ACA1_371750	join(<599112..599158,599335..>599527)	Acanthamoeba castellanii str. Neff	14918871
ACA1_371760	mRNA	ACA1_371760	NW_004457466.1	600198	601351	R	ACA1_371760	complement(join(<600198..600447,600612..600622,600731..600814,600922..601021,601162..601229,601304..>601351))	Acanthamoeba castellanii str. Neff	14918872
ACA1_371770	mRNA	ACA1_371770	NW_004457466.1	602001	603209	R	ACA1_371770	complement(join(<602001..602136,602399..602527,602619..602729,602824..>603209))	Acanthamoeba castellanii str. Neff	14918873
ACA1_371780	mRNA	ACA1_371780	NW_004457466.1	603456	603746	D	ACA1_371780	<603456..>603746	Acanthamoeba castellanii str. Neff	14918874
ACA1_371900	mRNA	ACA1_371900	NW_004457466.1	608804	609797	R	ACA1_371900	complement(join(<608804..609040,609126..609221,609300..609455,609568..609647,609704..>609797))	Acanthamoeba castellanii str. Neff	14918876
ACA1_372020	mRNA	ACA1_372020	NW_004457466.1	614722	616324	R	ACA1_372020	complement(join(<614722..615143,615239..615500,615608..>616324))	Acanthamoeba castellanii str. Neff	14918878
ACA1_372030	mRNA	ACA1_372030	NW_004457466.1	617109	617333	D	ACA1_372030	<617109..>617333	Acanthamoeba castellanii str. Neff	14918879
ACA1_372040	mRNA	ACA1_372040	NW_004457466.1	617442	620376	R	ACA1_372040	complement(join(<617442..617898,617987..618028,618124..618284,618475..618598,618696..619773,620058..>620376))	Acanthamoeba castellanii str. Neff	14918880
ACA1_372050	mRNA	ACA1_372050	NW_004457466.1	620795	622840	D	ACA1_372050	join(<620795..620898,621096..621230,621360..621469,621676..621818,621947..622066,622173..622308,622418..622550,622643..622734,622800..>622840)	Acanthamoeba castellanii str. Neff	14918881
ACA1_372060	mRNA	ACA1_372060	NW_004457466.1	622976	624484	R	ACA1_372060	complement(join(<622976..623350,623476..623722,623796..623941,624024..624148,624218..624290,624377..>624484))	Acanthamoeba castellanii str. Neff	14918882
ACA1_372070	mRNA	ACA1_372070	NW_004457466.1	624904	626371	R	ACA1_372070	complement(join(<624904..625094,625204..625310,625420..625540,625611..625747,625843..625977,626072..626146,626208..>626371))	Acanthamoeba castellanii str. Neff	14918883
ACA1_372100	mRNA	ACA1_372100	NW_004457466.1	632239	634614	D	ACA1_372100	join(<632239..632319,632424..632531,632600..632710,632810..632953,633025..633109,633191..633303,633389..633424,633456..633589,633666..633747,633830..633930,634003..634084,634195..634380,634465..>634614)	Acanthamoeba castellanii str. Neff	14918886
ACA1_372110	mRNA	ACA1_372110	NW_004457466.1	635238	636025	D	ACA1_372110	join(<635238..635269,635293..635500,635572..635673,635741..635850,635929..>636025)	Acanthamoeba castellanii str. Neff	14918887
ACA1_372220	mRNA	ACA1_372220	NW_004457466.1	640963	642280	D	ACA1_372220	join(<640963..640969,641065..641191,641275..641348,641410..641493,641578..641759,641829..641862,641939..642036,642146..>642280)	Acanthamoeba castellanii str. Neff	14918888
ACA1_372230	mRNA	ACA1_372230	NW_004457466.1	642864	644220	R	ACA1_372230	complement(join(<642864..643430,643539..643964,644023..>644220))	Acanthamoeba castellanii str. Neff	14918889
ACA1_161190	mRNA	ACA1_161190	NW_004457464.1	2107	2829	R	ACA1_161190	complement(<2107..>2829)	Acanthamoeba castellanii str. Neff	14918813
ACA1_161300	mRNA	ACA1_161300	NW_004457464.1	3792	6716	D	ACA1_161300	join(<3792..3930,4109..4255,4375..4476,6631..>6716)	Acanthamoeba castellanii str. Neff	14918838
ACA1_161410	mRNA	ACA1_161410	NW_004457464.1	7418	10048	D	ACA1_161410	join(<7418..7621,9654..9859,9931..>10048)	Acanthamoeba castellanii str. Neff	14918839
ACA1_161520	mRNA	ACA1_161520	NW_004457464.1	10166	13821	R	ACA1_161520	complement(join(<10166..10810,10834..11310,11408..11545,11676..11846,11955..12041,12132..12284,12401..12544,13261..13503,13693..>13821))	Acanthamoeba castellanii str. Neff	14918840
ACA1_161630	mRNA	ACA1_161630	NW_004457464.1	14183	16034	R	ACA1_161630	complement(join(<14183..14297,14414..14589,14684..14775,14854..15648,15760..15907,15999..>16034))	Acanthamoeba castellanii str. Neff	14918841
ACA1_161750	mRNA	ACA1_161750	NW_004457464.1	19587	20851	R	ACA1_161750	complement(join(<19587..19681,19748..19838,19941..20030,20184..20239,20321..20414,20513..>20851))	Acanthamoeba castellanii str. Neff	14918843
ACA1_161760	mRNA	ACA1_161760	NW_004457464.1	21022	22277	R	ACA1_161760	complement(join(<21022..21252,21349..21505,21715..>22277))	Acanthamoeba castellanii str. Neff	14918844
ACA1_161870	mRNA	ACA1_161870	NW_004457464.1	22448	24070	R	ACA1_161870	complement(join(<22448..22683,22761..22915,23034..23172,23255..23341,23420..23530,23568..23704,23783..23893,23974..>24070))	Acanthamoeba castellanii str. Neff	14918814
ACA1_161880	mRNA	ACA1_161880	NW_004457464.1	24374	25224	D	ACA1_161880	join(<24374..24478,24585..24707,24805..24870,24964..>25224)	Acanthamoeba castellanii str. Neff	14918815
ACA1_161990	mRNA	ACA1_161990	NW_004457464.1	26146	27443	D	ACA1_161990	join(<26146..26322,26394..26592,26654..26846,26911..27141,27221..>27443)	Acanthamoeba castellanii str. Neff	14918816
ACA1_162000	mRNA	ACA1_162000	NW_004457464.1	27955	28846	D	ACA1_162000	join(<27955..28003,28085..28202,28255..28377,28429..28560,28714..>28846)	Acanthamoeba castellanii str. Neff	14918817
ACA1_162110	mRNA	ACA1_162110	NW_004457464.1	30461	30893	D	ACA1_162110	join(<30461..30647,30724..>30893)	Acanthamoeba castellanii str. Neff	14918818
ACA1_162120	mRNA	ACA1_162120	NW_004457464.1	31097	35789	D	ACA1_162120	join(<31097..31246,31282..31332,31512..31935,32211..32272,32408..33211,33361..33495,33597..33650,33740..33923,34035..34797,34919..34976,35076..>35789)	Acanthamoeba castellanii str. Neff	14918819
ACA1_162230	mRNA	ACA1_162230	NW_004457464.1	35975	38365	D	ACA1_162230	join(<35975..36295,36416..36514,36608..36724,36869..36941,37037..37231,37355..37552,37637..37734,37837..37982,38101..>38365)	Acanthamoeba castellanii str. Neff	14918820
ACA1_162240	mRNA	ACA1_162240	NW_004457464.1	38616	38846	R	ACA1_162240	complement(<38616..>38846)	Acanthamoeba castellanii str. Neff	14918821
ACA1_162350	mRNA	ACA1_162350	NW_004457464.1	40634	41550	D	ACA1_162350	join(<40634..41152,41251..>41550)	Acanthamoeba castellanii str. Neff	14918822
ACA1_162360	mRNA	ACA1_162360	NW_004457464.1	41694	42619	D	ACA1_162360	join(<41694..41812,41965..>42619)	Acanthamoeba castellanii str. Neff	14918823
ACA1_162370	mRNA	ACA1_162370	NW_004457464.1	42725	44577	R	ACA1_162370	complement(join(<42725..42852,42930..43032,43116..43208,43288..43408,43557..43576,43765..43855,43976..>44577))	Acanthamoeba castellanii str. Neff	14918824
ACA1_162380	mRNA	ACA1_162380	NW_004457464.1	45165	45690	D	ACA1_162380	join(<45165..45285,45394..45447,45539..>45690)	Acanthamoeba castellanii str. Neff	14918825
ACA1_162490	mRNA	ACA1_162490	NW_004457464.1	45998	48864	D	ACA1_162490	join(<45998..46082,46207..46327,46428..46618,46672..46742,46823..46899,47010..47109,47201..47320,47383..47457,47588..47662,47764..47859,47954..48038,48125..48286,48360..48440,48540..48655,48736..>48864)	Acanthamoeba castellanii str. Neff	14918826
ACA1_162500	mRNA	ACA1_162500	NW_004457464.1	49049	49678	R	ACA1_162500	complement(join(<49049..49146,49244..49376,49451..>49678))	Acanthamoeba castellanii str. Neff	14918827
ACA1_162510	mRNA	ACA1_162510	NW_004457464.1	50188	53749	D	ACA1_162510	join(<50188..50369,50544..50586,50733..50844,50963..51018,51119..51269,51397..51665,51833..51916,51979..52054,52127..52197,52330..52413,52498..52579,52695..52756,52827..52965,53036..53096,53191..53365,53501..53586,53683..>53749)	Acanthamoeba castellanii str. Neff	14918828
ACA1_162520	mRNA	ACA1_162520	NW_004457464.1	53886	54332	R	ACA1_162520	complement(<53886..>54332)	Acanthamoeba castellanii str. Neff	14918829
ACA1_162530	mRNA	ACA1_162530	NW_004457464.1	54669	58275	R	ACA1_162530	complement(join(<54669..55327,55585..55741,55864..56078,56401..56544,56614..56671,56851..57114,57256..57382,57505..57703,57925..57997,58222..>58275))	Acanthamoeba castellanii str. Neff	14918830
ACA1_162540	mRNA	ACA1_162540	NW_004457464.1	59055	59675	R	ACA1_162540	complement(join(<59055..59065,59153..>59675))	Acanthamoeba castellanii str. Neff	14918831
ACA1_162550	mRNA	ACA1_162550	NW_004457464.1	59789	61863	R	ACA1_162550	complement(join(<59789..59915,59996..60099,60211..60395,60488..60609,60687..60802,61138..61259,61380..61483,61553..61654,61751..>61863))	Acanthamoeba castellanii str. Neff	14918832
ACA1_162660	mRNA	ACA1_162660	NW_004457464.1	63155	63531	D	ACA1_162660	join(<63155..63181,63313..>63531)	Acanthamoeba castellanii str. Neff	14918833
ACA1_162670	mRNA	ACA1_162670	NW_004457464.1	63717	64567	R	ACA1_162670	complement(join(<63717..63874,63959..64105,64201..64305,64414..>64567))	Acanthamoeba castellanii str. Neff	14918834
ACA1_162780	mRNA	ACA1_162780	NW_004457464.1	69753	70597	R	ACA1_162780	complement(join(<69753..69795,69880..69971,70038..70146,70238..70311,70506..>70597))	Acanthamoeba castellanii str. Neff	14918835
ACA1_162890	mRNA	ACA1_162890	NW_004457464.1	75567	76868	D	ACA1_162890	join(<75567..75638,75735..75803,75926..76002,76091..76180,76288..76449,76553..76664,76773..>76868)	Acanthamoeba castellanii str. Neff	14918836
ACA1_163110	mRNA	ACA1_163110	NW_004457464.1	83917	85532	R	ACA1_163110	complement(join(<83917..84011,84100..84183,84284..84431,84509..84595,84693..84778,84942..84982,85060..85131,85284..85419,85490..>85532))	Acanthamoeba castellanii str. Neff	14918802
ACA1_163130	mRNA	ACA1_163130	NW_004457464.1	87149	88045	R	ACA1_163130	complement(<87149..>88045)	Acanthamoeba castellanii str. Neff	14918804
ACA1_163140	mRNA	ACA1_163140	NW_004457464.1	88336	89384	D	ACA1_163140	join(<88336..88426,88577..88829,88945..89103,89198..>89384)	Acanthamoeba castellanii str. Neff	14918805
ACA1_163150	mRNA	ACA1_163150	NW_004457464.1	89656	91879	D	ACA1_163150	join(<89656..89933,90076..90148,90250..90384,90514..90571,90665..90790,90854..91064,91135..91234,91378..91440,91514..>91879)	Acanthamoeba castellanii str. Neff	14918806
ACA1_163160	mRNA	ACA1_163160	NW_004457464.1	91892	94319	R	ACA1_163160	complement(join(<91892..92095,92185..92409,92529..92804,92960..93189,93299..93400,93499..94030,94143..>94319))	Acanthamoeba castellanii str. Neff	14918807
ACA1_163170	mRNA	ACA1_163170	NW_004457464.1	95618	97376	R	ACA1_163170	complement(join(<95618..96430,96562..96889,96962..97177,97188..97266,97346..>97376))	Acanthamoeba castellanii str. Neff	14918808
ACA1_163180	mRNA	ACA1_163180	NW_004457464.1	97412	97926	R	ACA1_163180	complement(join(<97412..97557,97617..97773,97837..>97926))	Acanthamoeba castellanii str. Neff	14918809
ACA1_163190	mRNA	ACA1_163190	NW_004457464.1	98106	99634	R	ACA1_163190	complement(join(<98106..98150,98240..98391,98495..98578,98694..98818,98922..99224,99405..>99634))	Acanthamoeba castellanii str. Neff	14918810
ACA1_163200	mRNA	ACA1_163200	NW_004457464.1	99948	100574	R	ACA1_163200	complement(join(<99948..100060,100160..100328,100461..>100574))	Acanthamoeba castellanii str. Neff	14918811
ACA1_163210	mRNA	ACA1_163210	NW_004457464.1	101177	101995	D	ACA1_163210	join(<101177..101396,101465..101554,101664..101796,101899..>101995)	Acanthamoeba castellanii str. Neff	14918812
ACA1_083530	mRNA	ACA1_083530	NW_004457462.1	116	1192	R	ACA1_083530	complement(join(<116..203,283..469,553..657,760..920,999..>1192))	Acanthamoeba castellanii str. Neff	14918801
ACA1_083640	mRNA	ACA1_083640	NW_004457462.1	6735	8808	R	ACA1_083640	complement(join(<6735..7207,7312..7366,7441..7550,7684..7780,7875..7975,8106..8246,8317..8374,8464..8700,8764..>8808))	Acanthamoeba castellanii str. Neff	14918794
ACA1_083660	mRNA	ACA1_083660	NW_004457462.1	11178	11453	D	ACA1_083660	<11178..>11453	Acanthamoeba castellanii str. Neff	14918796
ACA1_083770	mRNA	ACA1_083770	NW_004457462.1	12729	13302	D	ACA1_083770	join(<12729..12812,13032..13192,13209..>13302)	Acanthamoeba castellanii str. Neff	14918797
ACA1_083780	mRNA	ACA1_083780	NW_004457462.1	13886	14161	D	ACA1_083780	<13886..>14161	Acanthamoeba castellanii str. Neff	14918798
ACA1_083890	mRNA	ACA1_083890	NW_004457462.1	15902	18195	D	ACA1_083890	join(<15902..16024,16098..16202,16288..16503,16593..16727,16815..16934,17020..17147,17226..17292,17371..17554,17630..17762,17889..17978,18159..>18195)	Acanthamoeba castellanii str. Neff	14918799
ACA1_083900	mRNA	ACA1_083900	NW_004457462.1	19003	23404	D	ACA1_083900	join(<19003..19100,19162..19236,19323..19432,19523..19816,19885..20000,20090..20177,20263..20381,20481..20575,20670..21775,21870..21933,22011..22126,22197..22397,22476..22861,22905..23228,23243..>23404)	Acanthamoeba castellanii str. Neff	14918800
ACA1_083910	mRNA	ACA1_083910	NW_004457462.1	23876	26036	D	ACA1_083910	join(<23876..23991,24083..24312,24440..24555,24669..24706,24850..25018,25210..25342,25430..25617,25701..25807,25904..>26036)	Acanthamoeba castellanii str. Neff	14918790
ACA1_083920	mRNA	ACA1_083920	NW_004457462.1	26216	26901	R	ACA1_083920	complement(join(<26216..26293,26360..26617,26680..>26901))	Acanthamoeba castellanii str. Neff	14918791
ACA1_083930	mRNA	ACA1_083930	NW_004457462.1	27308	28972	R	ACA1_083930	complement(join(<27308..28101,28163..28633,28730..28809,28923..>28972))	Acanthamoeba castellanii str. Neff	14918792
ACA1_083940	mRNA	ACA1_083940	NW_004457462.1	29950	30483	R	ACA1_083940	complement(join(<29950..29985,30085..30285,30361..>30483))	Acanthamoeba castellanii str. Neff	14918793
ACA1_102320	mRNA	ACA1_102320	NW_004457460.1	459	754	R	ACA1_102320	complement(join(<459..602,650..>754))	Acanthamoeba castellanii str. Neff	14918789
ACA1_102330	mRNA	ACA1_102330	NW_004457460.1	1122	1401	D	ACA1_102330	join(<1122..1316,1338..>1401)	Acanthamoeba castellanii str. Neff	14918784
ACA1_102450	mRNA	ACA1_102450	NW_004457460.1	7304	8731	R	ACA1_102450	complement(join(<7304..8523,8617..>8731))	Acanthamoeba castellanii str. Neff	14918785
ACA1_102460	mRNA	ACA1_102460	NW_004457460.1	9159	10637	D	ACA1_102460	<9159..>10637	Acanthamoeba castellanii str. Neff	14918786
ACA1_102470	mRNA	ACA1_102470	NW_004457460.1	11481	12147	R	ACA1_102470	complement(join(<11481..11863,11938..12064,12103..>12147))	Acanthamoeba castellanii str. Neff	14918787
ACA1_102480	mRNA	ACA1_102480	NW_004457460.1	14738	18775	R	ACA1_102480	complement(join(<14738..14806,15156..15221,15316..15408,15534..15617,15750..15857,15975..16114,16207..16348,16454..16543,16622..16707,16832..16967,17078..17137,17228..17539,17624..17806,17949..18085,18151..>18775))	Acanthamoeba castellanii str. Neff	14918782
ACA1_102790	mRNA	ACA1_102790	NW_004457460.1	28192	28884	R	ACA1_102790	complement(join(<28192..28296,28370..28449,28538..28662,28751..>28884))	Acanthamoeba castellanii str. Neff	14918783
ACA1_315590	mRNA	ACA1_315590	NW_004457458.1	27	1837	R	ACA1_315590	complement(join(<27..196,325..414,580..1054,1158..1409,1505..1596,1705..>1837))	Acanthamoeba castellanii str. Neff	14918781
ACA1_315600	mRNA	ACA1_315600	NW_004457458.1	2039	3795	R	ACA1_315600	complement(join(<2039..2164,2261..3529,3611..3645,3750..>3795))	Acanthamoeba castellanii str. Neff	14918776
ACA1_315610	mRNA	ACA1_315610	NW_004457458.1	4172	4783	D	ACA1_315610	join(<4172..4241,4320..>4783)	Acanthamoeba castellanii str. Neff	14918777
ACA1_315620	mRNA	ACA1_315620	NW_004457458.1	4871	6908	R	ACA1_315620	complement(join(<4871..5075,5168..5322,5411..5548,5662..5861,6091..6225,6293..6397,6516..6753,6876..>6908))	Acanthamoeba castellanii str. Neff	14918778
ACA1_315630	mRNA	ACA1_315630	NW_004457458.1	7829	9784	R	ACA1_315630	complement(join(<7829..7924,8024..8143,8239..8298,8440..8656,8743..8860,9004..9120,9202..9274,9377..9448,9611..>9784))	Acanthamoeba castellanii str. Neff	14918779
ACA1_315640	mRNA	ACA1_315640	NW_004457458.1	10223	10851	D	ACA1_315640	join(<10223..10508,10583..>10851)	Acanthamoeba castellanii str. Neff	14918780
ACA1_327110	mRNA	ACA1_327110	NW_004457456.1	1906	2313	D	ACA1_327110	<1906..>2313	Acanthamoeba castellanii str. Neff	14918772
ACA1_327230	mRNA	ACA1_327230	NW_004457456.1	3700	8607	D	ACA1_327230	join(<3700..3839,3921..4060,4076..4176,4203..4327,4409..4605,4681..4839,4921..5051,5134..5215,5292..5397,5468..5735,5841..5972,6057..6215,6293..6440,6531..7039,7133..7213,7328..7521,7592..7782,7839..8053,8148..8323,8448..>8607)	Acanthamoeba castellanii str. Neff	14918769
ACA1_327240	mRNA	ACA1_327240	NW_004457456.1	8692	9275	D	ACA1_327240	join(<8692..8806,8877..9066,9161..>9275)	Acanthamoeba castellanii str. Neff	14918770
ACA1_327250	mRNA	ACA1_327250	NW_004457456.1	9513	11814	D	ACA1_327250	join(<9513..10713,11033..>11814)	Acanthamoeba castellanii str. Neff	14918771
ACA1_327260	mRNA	ACA1_327260	NW_004457456.1	11938	12495	R	ACA1_327260	complement(join(<11938..12302,12335..12375,12416..>12495))	Acanthamoeba castellanii str. Neff	14918773
ACA1_327270	mRNA	ACA1_327270	NW_004457456.1	12807	13666	D	ACA1_327270	join(<12807..12845,12934..13000,13085..13194,13264..13323,13389..13505,13535..>13666)	Acanthamoeba castellanii str. Neff	14918774
ACA1_206310	mRNA	ACA1_206310	NW_004457453.1	33	1772	D	ACA1_206310	join(<33..128,271..406,502..672,801..906,1058..1171,1263..1425,1566..>1772)	Acanthamoeba castellanii str. Neff	14918689
ACA1_206320	mRNA	ACA1_206320	NW_004457453.1	1970	6458	R	ACA1_206320	complement(join(<1970..2455,2534..2854,2960..3052,3122..3211,3285..3390,3478..3611,3721..3893,4002..4131,4228..4616,4674..4806,4881..5273,5355..5431,5537..5559,5728..>6458))	Acanthamoeba castellanii str. Neff	14918690
ACA1_206330	mRNA	ACA1_206330	NW_004457453.1	7924	11235	D	ACA1_206330	join(<7924..8166,8254..8489,8549..8624,8725..8822,8902..9017,9082..9133,9208..9412,9508..9647,9738..9885,9982..10107,10191..10254,10333..10473,10574..>11235)	Acanthamoeba castellanii str. Neff	14918691
ACA1_206340	mRNA	ACA1_206340	NW_004457453.1	11680	14147	D	ACA1_206340	join(<11680..11829,11939..11969,12058..12197,12264..12362,12445..12776,12842..13379,13459..13903,13999..>14147)	Acanthamoeba castellanii str. Neff	14918679
ACA1_206350	mRNA	ACA1_206350	NW_004457453.1	14280	14684	D	ACA1_206350	join(<14280..14460,14548..>14684)	Acanthamoeba castellanii str. Neff	14918680
ACA1_206360	mRNA	ACA1_206360	NW_004457453.1	14807	16091	D	ACA1_206360	join(<14807..15236,15308..15644,15713..>16091)	Acanthamoeba castellanii str. Neff	14918681
ACA1_206370	mRNA	ACA1_206370	NW_004457453.1	16415	17783	D	ACA1_206370	join(<16415..16645,16735..16916,16952..16966,16978..17105,17178..17262,17335..17397,17472..17638,17713..>17783)	Acanthamoeba castellanii str. Neff	14918682
ACA1_206380	mRNA	ACA1_206380	NW_004457453.1	17878	18996	D	ACA1_206380	join(<17878..18025,18090..18232,18316..18427,18526..18748,18810..>18996)	Acanthamoeba castellanii str. Neff	14918683
ACA1_206390	mRNA	ACA1_206390	NW_004457453.1	19102	20126	R	ACA1_206390	complement(join(<19102..19128,19145..19177,19401..19883,20016..>20126))	Acanthamoeba castellanii str. Neff	14918684
ACA1_206500	mRNA	ACA1_206500	NW_004457453.1	20455	20986	D	ACA1_206500	join(<20455..20493,20597..20715,20794..>20986)	Acanthamoeba castellanii str. Neff	14918685
ACA1_206510	mRNA	ACA1_206510	NW_004457453.1	21285	21589	D	ACA1_206510	join(<21285..21352,21442..>21589)	Acanthamoeba castellanii str. Neff	14918686
ACA1_206620	mRNA	ACA1_206620	NW_004457453.1	23785	26054	D	ACA1_206620	join(<23785..23968,24048..24149,24209..24367,24435..24609,24692..24821,24908..24950,25054..25192,25301..25397,25486..25563,25641..25811,25923..>26054)	Acanthamoeba castellanii str. Neff	14918687
ACA1_206630	mRNA	ACA1_206630	NW_004457453.1	26274	27368	R	ACA1_206630	complement(<26274..>27368)	Acanthamoeba castellanii str. Neff	14918688
ACA1_206740	mRNA	ACA1_206740	NW_004457453.1	27769	28279	D	ACA1_206740	join(<27769..27779,27830..27936,28014..>28279)	Acanthamoeba castellanii str. Neff	14918637
ACA1_206750	mRNA	ACA1_206750	NW_004457453.1	28337	29701	R	ACA1_206750	complement(<28337..>29701)	Acanthamoeba castellanii str. Neff	14918638
ACA1_206760	mRNA	ACA1_206760	NW_004457453.1	30125	35589	D	ACA1_206760	join(<30125..30793,30896..31165,31198..31908,32205..32286,32363..32584,32681..33083,33156..33694,33802..34971,35047..35114,35208..35469,35543..>35589)	Acanthamoeba castellanii str. Neff	14918639
ACA1_206870	mRNA	ACA1_206870	NW_004457453.1	35805	36541	R	ACA1_206870	complement(join(<35805..36050,36130..36258,36356..>36541))	Acanthamoeba castellanii str. Neff	14918640
ACA1_206980	mRNA	ACA1_206980	NW_004457453.1	40228	40995	R	ACA1_206980	complement(join(<40228..40634,40779..>40995))	Acanthamoeba castellanii str. Neff	14918641
ACA1_207090	mRNA	ACA1_207090	NW_004457453.1	43850	44676	D	ACA1_207090	join(<43850..43984,43996..>44676)	Acanthamoeba castellanii str. Neff	14918642
ACA1_207200	mRNA	ACA1_207200	NW_004457453.1	50205	51821	D	ACA1_207200	join(<50205..50389,50509..50626,50785..50901,51020..51120,51247..51374,51480..51562,51801..>51821)	Acanthamoeba castellanii str. Neff	14918643
ACA1_207310	mRNA	ACA1_207310	NW_004457453.1	51939	52106	R	ACA1_207310	complement(<51939..>52106)	Acanthamoeba castellanii str. Neff	14918644
ACA1_207320	mRNA	ACA1_207320	NW_004457453.1	52632	54195	D	ACA1_207320	join(<52632..52794,52951..53111,53183..53303,53400..53528,53598..53768,53858..>54195)	Acanthamoeba castellanii str. Neff	14918645
ACA1_207330	mRNA	ACA1_207330	NW_004457453.1	54438	55443	R	ACA1_207330	complement(join(<54438..54656,54763..54864,55002..55142,55252..>55443))	Acanthamoeba castellanii str. Neff	14918646
ACA1_207340	mRNA	ACA1_207340	NW_004457453.1	55870	57241	D	ACA1_207340	join(<55870..55966,56110..56213,56331..56404,56524..56589,56712..56870,56971..>57241)	Acanthamoeba castellanii str. Neff	14918647
ACA1_207350	mRNA	ACA1_207350	NW_004457453.1	57356	59637	R	ACA1_207350	complement(join(<57356..57517,57638..57784,57880..58009,58118..58206,58282..58421,58481..58610,58745..58888,59007..59285,59397..59519,59608..>59637))	Acanthamoeba castellanii str. Neff	14918648
ACA1_207360	mRNA	ACA1_207360	NW_004457453.1	60138	62549	R	ACA1_207360	complement(join(<60138..60403,60508..60643,60743..60838,60896..61053,61163..61352,61450..61641,61680..62061,62132..62336,62474..>62549))	Acanthamoeba castellanii str. Neff	14918649
ACA1_207470	mRNA	ACA1_207470	NW_004457453.1	64698	66871	D	ACA1_207470	join(<64698..64838,64917..65055,65168..65208,65233..65410,65579..65663,65726..65909,66026..66201,66318..66690,66767..>66871)	Acanthamoeba castellanii str. Neff	14918650
ACA1_207480	mRNA	ACA1_207480	NW_004457453.1	67584	68349	R	ACA1_207480	complement(join(<67584..67730,67813..67970,68049..>68349))	Acanthamoeba castellanii str. Neff	14918651
ACA1_207490	mRNA	ACA1_207490	NW_004457453.1	68904	71934	R	ACA1_207490	complement(join(<68904..68911,68967..69049,69154..69301,69401..69513,69624..69688,69716..69799,69842..69893,69966..70033,70119..70182,70533..70696,70809..70932,70950..70981,71110..71316,71403..71567,71647..71742,71821..>71934))	Acanthamoeba castellanii str. Neff	14918652
ACA1_207500	mRNA	ACA1_207500	NW_004457453.1	72419	74041	R	ACA1_207500	complement(join(<72419..72940,73004..73371,73445..73696,73787..73846,74005..>74041))	Acanthamoeba castellanii str. Neff	14918653
ACA1_207510	mRNA	ACA1_207510	NW_004457453.1	74365	78005	D	ACA1_207510	join(<74365..74594,74711..74800,74911..75112,75188..75325,75413..75574,76663..76914,77115..77252,77346..77564,77649..77813,77937..>78005)	Acanthamoeba castellanii str. Neff	14918746
ACA1_207820	mRNA	ACA1_207820	NW_004457453.1	79781	80674	D	ACA1_207820	<79781..>80674	Acanthamoeba castellanii str. Neff	14918747
ACA1_207830	mRNA	ACA1_207830	NW_004457453.1	81278	83115	D	ACA1_207830	join(<81278..81524,81768..81895,81975..82133,82257..82497,82708..82913,83038..>83115)	Acanthamoeba castellanii str. Neff	14918748
ACA1_207940	mRNA	ACA1_207940	NW_004457453.1	84053	90385	D	ACA1_207940	join(<84053..84094,84184..84322,84450..84643,84755..85076,85158..85279,85397..85519,85646..85906,86011..86187,86287..86782,86862..87908,88017..88473,88564..>90385)	Acanthamoeba castellanii str. Neff	14918749
ACA1_207950	mRNA	ACA1_207950	NW_004457453.1	91585	91906	R	ACA1_207950	complement(join(<91585..91757,91798..>91906))	Acanthamoeba castellanii str. Neff	14918750
ACA1_207960	mRNA	ACA1_207960	NW_004457453.1	92993	93445	R	ACA1_207960	complement(join(<92993..93178,93383..>93445))	Acanthamoeba castellanii str. Neff	14918751
ACA1_207970	mRNA	ACA1_207970	NW_004457453.1	93824	95490	R	ACA1_207970	complement(join(<93824..94027,94104..94310,94419..94547,94631..94688,94734..95053,95147..95325,95418..>95490))	Acanthamoeba castellanii str. Neff	14918752
ACA1_208080	mRNA	ACA1_208080	NW_004457453.1	96018	96754	R	ACA1_208080	complement(join(<96018..96036,96142..96544,96676..>96754))	Acanthamoeba castellanii str. Neff	14918753
ACA1_208090	mRNA	ACA1_208090	NW_004457453.1	97108	100066	R	ACA1_208090	complement(join(<97108..97311,97400..97606,97711..97839,97905..97962,98008..98327,98435..98613,98697..99083,99179..99271,99377..99661,99910..>100066))	Acanthamoeba castellanii str. Neff	14918754
ACA1_208100	mRNA	ACA1_208100	NW_004457453.1	100575	102426	D	ACA1_208100	join(<100575..100678,100805..101353,101428..101787,101901..>102426)	Acanthamoeba castellanii str. Neff	14918755
ACA1_208110	mRNA	ACA1_208110	NW_004457453.1	102994	107861	D	ACA1_208110	join(<102994..103119,103242..103376,103461..103733,103797..103910,103992..104141,104192..104351,104452..104751,104865..105130,105223..105445,105543..105734,105832..106022,106140..106352,106449..106529,106606..106766,106872..106926,107022..>107861)	Acanthamoeba castellanii str. Neff	14918756
ACA1_208120	mRNA	ACA1_208120	NW_004457453.1	108010	109245	D	ACA1_208120	join(<108010..108039,108132..108404,108537..108615,108644..>109245)	Acanthamoeba castellanii str. Neff	14918757
ACA1_208130	mRNA	ACA1_208130	NW_004457453.1	109462	112591	R	ACA1_208130	complement(join(<109462..109480,109574..109639,109719..109871,109962..110165,110285..110913,110996..111097,111211..111291,111353..111433,111553..111622,111706..111872,111955..112041,112110..112230,112386..>112591))	Acanthamoeba castellanii str. Neff	14918758
ACA1_208140	mRNA	ACA1_208140	NW_004457453.1	112985	114126	R	ACA1_208140	complement(join(<112985..113072,113266..113556,113786..113957,114036..>114126))	Acanthamoeba castellanii str. Neff	14918759
ACA1_208150	mRNA	ACA1_208150	NW_004457453.1	114998	116049	D	ACA1_208150	join(<114998..115084,115184..115282,115451..115767,115881..>116049)	Acanthamoeba castellanii str. Neff	14918760
ACA1_208170	mRNA	ACA1_208170	NW_004457453.1	117100	118707	D	ACA1_208170	join(<117100..117268,117351..117608,117691..117779,117869..117964,118045..118107,118207..118435,118529..>118707)	Acanthamoeba castellanii str. Neff	14918762
ACA1_208180	mRNA	ACA1_208180	NW_004457453.1	119261	123471	D	ACA1_208180	join(<119261..119460,119586..119703,119813..120089,120171..120844,120879..122132,122216..122455,122538..123027,123146..123228,123358..>123471)	Acanthamoeba castellanii str. Neff	14918763
ACA1_208190	mRNA	ACA1_208190	NW_004457453.1	124815	125318	R	ACA1_208190	complement(<124815..>125318)	Acanthamoeba castellanii str. Neff	14918764
ACA1_208200	mRNA	ACA1_208200	NW_004457453.1	125576	127395	R	ACA1_208200	complement(join(<125576..125836,126015..126163,126290..126371,126514..126859,126947..127035,127192..>127395))	Acanthamoeba castellanii str. Neff	14918765
ACA1_208210	mRNA	ACA1_208210	NW_004457453.1	127841	129233	R	ACA1_208210	complement(join(<127841..128008,128084..128250,128334..128433,128526..128595,128677..128755,128849..128931,129007..>129233))	Acanthamoeba castellanii str. Neff	14918766
ACA1_208220	mRNA	ACA1_208220	NW_004457453.1	129498	133099	D	ACA1_208220	join(<129498..129586,129695..129841,129949..130079,130166..130241,130355..130618,130734..130835,130915..131043,131144..131228,131366..131500,131594..131662,131691..131942,132049..132185,132301..132424,132899..>133099)	Acanthamoeba castellanii str. Neff	14918767
ACA1_208230	mRNA	ACA1_208230	NW_004457453.1	133365	139959	D	ACA1_208230	join(<133365..133797,133891..133995,134129..134291,134428..134534,134655..134787,134910..135030,135097..135168,135282..135404,135572..135688,135782..135979,136141..136427,136512..136618,136743..136924,137008..137283,137405..137485,137614..137913,137999..138559,138634..138746,138812..138945,139055..139146,139266..139338,139475..139572,139696..>139959)	Acanthamoeba castellanii str. Neff	14918692
ACA1_208240	mRNA	ACA1_208240	NW_004457453.1	140562	142192	R	ACA1_208240	complement(join(<140562..140675,140733..140812,140910..141023,141093..141185,141281..141338,141442..141542,141643..141718,141836..141923,142056..>142192))	Acanthamoeba castellanii str. Neff	14918693
ACA1_208250	mRNA	ACA1_208250	NW_004457453.1	144032	145398	R	ACA1_208250	complement(join(<144032..144082,144161..144240,144427..144544,144680..144770,144866..145003,145151..>145398))	Acanthamoeba castellanii str. Neff	14918694
ACA1_208260	mRNA	ACA1_208260	NW_004457453.1	145505	149262	R	ACA1_208260	complement(join(<145505..145582,145704..145861,145986..146141,146261..146361,146404..146578,146674..146862,146947..147033,147093..147194,147281..147433,147527..147653,147750..147895,147962..148106,148227..148304,148406..148493,148648..148718,148791..148931,149029..>149262))	Acanthamoeba castellanii str. Neff	14918695
ACA1_208270	mRNA	ACA1_208270	NW_004457453.1	149792	150464	R	ACA1_208270	complement(join(<149792..149864,150033..150201,150395..>150464))	Acanthamoeba castellanii str. Neff	14918696
ACA1_208280	mRNA	ACA1_208280	NW_004457453.1	150587	151751	D	ACA1_208280	join(<150587..150695,150776..150925,151064..151184,151274..151381,151457..>151751)	Acanthamoeba castellanii str. Neff	14918697
ACA1_208290	mRNA	ACA1_208290	NW_004457453.1	151835	153841	R	ACA1_208290	complement(join(<151835..151968,152024..152161,152264..152388,152484..152591,152679..152979,153118..>153841))	Acanthamoeba castellanii str. Neff	14918698
ACA1_208300	mRNA	ACA1_208300	NW_004457453.1	154338	156419	R	ACA1_208300	complement(join(<154338..154447,154575..154685,154836..154917,154991..155110,155174..155403,155496..155662,155771..155933,156047..>156419))	Acanthamoeba castellanii str. Neff	14918699
ACA1_208310	mRNA	ACA1_208310	NW_004457453.1	156683	158976	R	ACA1_208310	complement(join(<156683..156889,156972..157037,157127..157329,157407..157485,157511..157651,157745..157897,158001..158038,158173..158327,158526..158727,158865..>158976))	Acanthamoeba castellanii str. Neff	14918700
ACA1_208320	mRNA	ACA1_208320	NW_004457453.1	159215	161723	R	ACA1_208320	complement(join(<159215..159529,159633..159699,159769..159917,159983..160066,160190..160282,160340..160709,160801..160885,160964..161025,161087..161168,161245..161382,161486..>161723))	Acanthamoeba castellanii str. Neff	14918701
ACA1_208330	mRNA	ACA1_208330	NW_004457453.1	161924	165392	R	ACA1_208330	complement(join(<161924..162106,162188..162295,162411..162506,162605..162790,162918..163190,163278..163385,163463..163540,163647..163781,163900..163998,164161..164260,164337..164532,164643..164751,164908..165065,165353..>165392))	Acanthamoeba castellanii str. Neff	14918702
ACA1_208340	mRNA	ACA1_208340	NW_004457453.1	165491	165837	R	ACA1_208340	complement(join(<165491..165546,165627..165774,165817..>165837))	Acanthamoeba castellanii str. Neff	14918703
ACA1_208350	mRNA	ACA1_208350	NW_004457453.1	166024	168905	R	ACA1_208350	complement(join(<166024..168758,168800..>168905))	Acanthamoeba castellanii str. Neff	14918704
ACA1_208360	mRNA	ACA1_208360	NW_004457453.1	169185	171208	D	ACA1_208360	join(<169185..169253,169638..169746,169802..169865,170057..171073,171166..>171208)	Acanthamoeba castellanii str. Neff	14918705
ACA1_208370	mRNA	ACA1_208370	NW_004457453.1	171378	174024	D	ACA1_208370	join(<171378..171523,171848..171953,172142..172257,172495..172585,172681..172948,173033..173220,173338..173694,173775..173895,173984..>174024)	Acanthamoeba castellanii str. Neff	14918706
ACA1_208380	mRNA	ACA1_208380	NW_004457453.1	174629	176245	D	ACA1_208380	join(<174629..174814,174896..175102,175210..175334,175442..175597,175716..175854,175940..176113,176210..>176245)	Acanthamoeba castellanii str. Neff	14918707
ACA1_208390	mRNA	ACA1_208390	NW_004457453.1	177025	178024	D	ACA1_208390	join(<177025..177271,177365..177433,177638..177753,177833..>178024)	Acanthamoeba castellanii str. Neff	14918708
ACA1_208400	mRNA	ACA1_208400	NW_004457453.1	178222	183032	D	ACA1_208400	join(<178222..178358,178427..178481,178587..178752,178859..179218,179318..179427,179525..179777,179916..180206,180385..180485,180582..180660,180789..180948,181037..181162,181271..181393,181501..181573,181708..181821,181899..182039,182177..182256,182413..182512,182664..182801,182916..>183032)	Acanthamoeba castellanii str. Neff	14918709
ACA1_208410	mRNA	ACA1_208410	NW_004457453.1	183330	186420	R	ACA1_208410	complement(join(<183330..183551,183650..183762,183867..184010,184082..184193,184266..184324,184406..184568,184692..184757,184838..184993,185103..185183,185284..185496,185648..185774,186221..>186420))	Acanthamoeba castellanii str. Neff	14918710
ACA1_208420	mRNA	ACA1_208420	NW_004457453.1	187143	189681	R	ACA1_208420	complement(join(<187143..187335,187445..187628,187755..187832,187952..188080,188221..188373,188420..188496,188534..188660,188751..188894,189021..189213,189404..189512,189611..>189681))	Acanthamoeba castellanii str. Neff	14918711
ACA1_208430	mRNA	ACA1_208430	NW_004457453.1	189769	192283	D	ACA1_208430	join(<189769..189819,189938..189993,190172..190256,190366..191078,191176..>192283)	Acanthamoeba castellanii str. Neff	14918654
ACA1_208440	mRNA	ACA1_208440	NW_004457453.1	192469	194317	R	ACA1_208440	complement(join(<192469..192606,192695..192772,192880..193008,193123..193177,193324..193436,193575..193751,193947..194017,194116..>194317))	Acanthamoeba castellanii str. Neff	14918655
ACA1_208450	mRNA	ACA1_208450	NW_004457453.1	194839	196228	R	ACA1_208450	complement(join(<194839..195197,195290..195469,195552..195911,196030..>196228))	Acanthamoeba castellanii str. Neff	14918656
ACA1_208460	mRNA	ACA1_208460	NW_004457453.1	196987	199132	R	ACA1_208460	complement(join(<196987..197296,197368..197549,197687..197801,197911..198057,198175..198318,198448..198658,198757..198886,198995..>199132))	Acanthamoeba castellanii str. Neff	14918657
ACA1_208470	mRNA	ACA1_208470	NW_004457453.1	199859	203211	D	ACA1_208470	join(<199859..200334,200482..200617,200863..200917,201033..201164,201245..201319,201452..201578,201680..201792,201935..202059,202180..202274,202361..202458,202620..202675,202854..202941,203063..>203211)	Acanthamoeba castellanii str. Neff	14918658
ACA1_208480	mRNA	ACA1_208480	NW_004457453.1	204166	207432	D	ACA1_208480	join(<204166..204597,204636..204710,204940..205602,205699..205885,205964..206115,206201..206273,206387..206527,206623..206711,206797..207033,207313..>207432)	Acanthamoeba castellanii str. Neff	14918659
ACA1_208490	mRNA	ACA1_208490	NW_004457453.1	207803	209001	D	ACA1_208490	join(<207803..208367,208445..>209001)	Acanthamoeba castellanii str. Neff	14918660
ACA1_208500	mRNA	ACA1_208500	NW_004457453.1	209115	212030	D	ACA1_208500	join(<209115..209184,209227..209447,209522..209612,209740..209979,210118..210179,210291..210486,210572..210631,210711..210829,210929..211190,211258..211369,211466..211520,211616..211713,211818..211902,211979..>212030)	Acanthamoeba castellanii str. Neff	14918661
ACA1_208510	mRNA	ACA1_208510	NW_004457453.1	214100	214644	R	ACA1_208510	complement(join(<214100..214480,214564..>214644))	Acanthamoeba castellanii str. Neff	14918662
ACA1_208530	mRNA	ACA1_208530	NW_004457453.1	215623	216444	R	ACA1_208530	complement(join(<215623..215812,215942..216215,216360..>216444))	Acanthamoeba castellanii str. Neff	14918664
ACA1_208540	mRNA	ACA1_208540	NW_004457453.1	217811	219298	D	ACA1_208540	<217811..>219298	Acanthamoeba castellanii str. Neff	14918665
ACA1_208550	mRNA	ACA1_208550	NW_004457453.1	219373	220668	R	ACA1_208550	complement(join(<219373..219474,219583..219668,219784..219957,220164..220439,220596..>220668))	Acanthamoeba castellanii str. Neff	14918666
ACA1_208570	mRNA	ACA1_208570	NW_004457453.1	224309	226115	D	ACA1_208570	join(<224309..224668,224920..225010,225141..225318,225427..225741,225836..>226115)	Acanthamoeba castellanii str. Neff	14918668
ACA1_208580	mRNA	ACA1_208580	NW_004457453.1	226365	229289	R	ACA1_208580	complement(join(<226365..226524,226594..226673,226779..226897,227000..227116,227207..227240,227331..227435,227527..227635,227757..227842,227905..228036,228142..228249,228466..228524,228598..228725,228837..228969,229187..>229289))	Acanthamoeba castellanii str. Neff	14918669
ACA1_208600	mRNA	ACA1_208600	NW_004457453.1	235774	237125	D	ACA1_208600	join(<235774..235827,235925..236030,236111..236221,236309..236496,236583..236708,236799..>237125)	Acanthamoeba castellanii str. Neff	14918671
ACA1_208610	mRNA	ACA1_208610	NW_004457453.1	237211	239189	D	ACA1_208610	join(<237211..237337,237404..237535,237660..237797,237887..237996,238061..238132,238205..238348,238429..238524,238608..238723,238774..238930,239097..>239189)	Acanthamoeba castellanii str. Neff	14918672
ACA1_208620	mRNA	ACA1_208620	NW_004457453.1	239985	244646	D	ACA1_208620	join(<239985..240354,240558..240642,240722..240890,241026..241142,241232..241316,241453..241529,241640..241711,241802..241893,242028..242150,242243..242303,242403..242541,242664..242791,242877..242940,243018..243424,243525..243618,243720..244038,244140..244259,244363..244412,244501..>244646)	Acanthamoeba castellanii str. Neff	14918673
ACA1_208730	mRNA	ACA1_208730	NW_004457453.1	246660	247182	R	ACA1_208730	complement(join(<246660..246907,246922..>247182))	Acanthamoeba castellanii str. Neff	14918674
ACA1_208840	mRNA	ACA1_208840	NW_004457453.1	250447	251649	R	ACA1_208840	complement(join(<250447..250452,250563..251066,251206..>251649))	Acanthamoeba castellanii str. Neff	14918675
ACA1_208850	mRNA	ACA1_208850	NW_004457453.1	252875	254733	R	ACA1_208850	complement(join(<252875..252937,253084..253292,253411..253507,254290..>254733))	Acanthamoeba castellanii str. Neff	14918676
ACA1_208960	mRNA	ACA1_208960	NW_004457453.1	255833	259722	R	ACA1_208960	complement(join(<255833..255895,256012..256220,256344..256440,256549..256653,256771..256889,256970..257060,257208..257460,257601..257710,257845..258001,258146..258249,258326..258436,258544..258792,258880..258980,259092..259239,259540..>259722))	Acanthamoeba castellanii str. Neff	14918677
ACA1_208970	mRNA	ACA1_208970	NW_004457453.1	260895	262770	D	ACA1_208970	join(<260895..260929,260996..261102,261171..261293,261354..261459,261523..261987,262066..262283,262361..>262770)	Acanthamoeba castellanii str. Neff	14918678
ACA1_208980	mRNA	ACA1_208980	NW_004457453.1	263012	263670	D	ACA1_208980	join(<263012..263248,263323..>263670)	Acanthamoeba castellanii str. Neff	14918712
ACA1_209100	mRNA	ACA1_209100	NW_004457453.1	267612	272034	R	ACA1_209100	complement(join(<267612..267743,267827..269788,269864..269998,270060..270317,270412..270492,270577..270644,270725..270850,270926..271051,271125..271334,271430..271497,271669..271724,271858..>272034))	Acanthamoeba castellanii str. Neff	14918714
ACA1_209110	mRNA	ACA1_209110	NW_004457453.1	272315	274106	D	ACA1_209110	join(<272315..272439,272521..272560,272629..272728,272819..272941,273077..273168,273248..273278,273361..273560,273649..273832,273991..>274106)	Acanthamoeba castellanii str. Neff	14918715
ACA1_209120	mRNA	ACA1_209120	NW_004457453.1	274796	278207	D	ACA1_209120	join(<274796..274872,274997..275132,275209..275353,275457..275829,275934..276070,276147..276196,276297..276405,276513..276606,276715..276798,276927..277015,277126..277247,277334..277520,277601..277674,277740..277811,277915..278012,278111..>278207)	Acanthamoeba castellanii str. Neff	14918716
ACA1_209230	mRNA	ACA1_209230	NW_004457453.1	280755	281482	D	ACA1_209230	join(<280755..280758,280847..280920,280974..281060,281184..281300,281366..>281482)	Acanthamoeba castellanii str. Neff	14918717
ACA1_209240	mRNA	ACA1_209240	NW_004457453.1	281665	282189	R	ACA1_209240	complement(join(<281665..282014,282096..>282189))	Acanthamoeba castellanii str. Neff	14918718
ACA1_209250	mRNA	ACA1_209250	NW_004457453.1	282871	284115	R	ACA1_209250	complement(<282871..>284115)	Acanthamoeba castellanii str. Neff	14918719
ACA1_209260	mRNA	ACA1_209260	NW_004457453.1	284795	285749	R	ACA1_209260	complement(join(<284795..285177,285253..285405,285488..285550,285599..>285749))	Acanthamoeba castellanii str. Neff	14918720
ACA1_209370	mRNA	ACA1_209370	NW_004457453.1	286382	286697	D	ACA1_209370	join(<286382..286484,286564..>286697)	Acanthamoeba castellanii str. Neff	14918721
ACA1_209380	mRNA	ACA1_209380	NW_004457453.1	288114	289736	D	ACA1_209380	<288114..>289736	Acanthamoeba castellanii str. Neff	14918722
ACA1_209420	mRNA	ACA1_209420	NW_004457453.1	298222	301467	D	ACA1_209420	join(<298222..298534,298625..298713,298819..298936,299035..299123,299261..299332,299509..299672,299737..299811,299925..300201,300317..300519,300617..300735,300811..300926,301079..301199,301283..>301467)	Acanthamoeba castellanii str. Neff	14918726
ACA1_209530	mRNA	ACA1_209530	NW_004457453.1	302273	304892	R	ACA1_209530	complement(join(<302273..302452,302556..302714,302828..302907,302982..303079,303232..303389,303525..303618,303747..303998,304080..304173,304259..304439,304576..304753,304819..>304892))	Acanthamoeba castellanii str. Neff	14918727
ACA1_209540	mRNA	ACA1_209540	NW_004457453.1	307051	307314	D	ACA1_209540	join(<307051..307142,307170..>307314)	Acanthamoeba castellanii str. Neff	14918728
ACA1_209650	mRNA	ACA1_209650	NW_004457453.1	308605	308920	D	ACA1_209650	join(<308605..308707,308787..>308920)	Acanthamoeba castellanii str. Neff	14918729
ACA1_209660	mRNA	ACA1_209660	NW_004457453.1	309184	312175	D	ACA1_209660	join(<309184..309188,309569..309707,309875..309957,310026..310071,310568..>312175)	Acanthamoeba castellanii str. Neff	14918730
ACA1_209770	mRNA	ACA1_209770	NW_004457453.1	313119	314169	D	ACA1_209770	join(<313119..313141,313305..313404,313423..313619,313675..313883,314072..>314169)	Acanthamoeba castellanii str. Neff	14918731
ACA1_209780	mRNA	ACA1_209780	NW_004457453.1	314222	317725	R	ACA1_209780	complement(join(<314222..314656,314740..314979,315059..315168,315270..315824,315907..315992,316068..316224,316351..316539,316615..316735,316789..316993,317078..317260,317342..317579,317605..>317725))	Acanthamoeba castellanii str. Neff	14918732
ACA1_209790	mRNA	ACA1_209790	NW_004457453.1	318295	323859	R	ACA1_209790	complement(join(<318295..319162,319273..319819,319933..320029,320113..321268,321349..321475,321549..321834,321907..321971,322032..322784,322876..323051,323206..323666,323731..>323859))	Acanthamoeba castellanii str. Neff	14918733
ACA1_209800	mRNA	ACA1_209800	NW_004457453.1	324745	325771	D	ACA1_209800	join(<324745..325230,325345..325487,325600..>325771)	Acanthamoeba castellanii str. Neff	14918734
ACA1_209820	mRNA	ACA1_209820	NW_004457453.1	332812	333971	R	ACA1_209820	complement(join(<332812..332910,333024..333083,333163..333216,333336..>333971))	Acanthamoeba castellanii str. Neff	14918736
ACA1_209830	mRNA	ACA1_209830	NW_004457453.1	334121	335539	R	ACA1_209830	complement(join(<334121..334190,334289..334544,334617..334671,334768..334884,334950..335084,335205..335320,335404..>335539))	Acanthamoeba castellanii str. Neff	14918737
ACA1_209840	mRNA	ACA1_209840	NW_004457453.1	335707	336672	D	ACA1_209840	join(<335707..335769,335822..336040,336115..>336672)	Acanthamoeba castellanii str. Neff	14918738
ACA1_209850	mRNA	ACA1_209850	NW_004457453.1	337346	338786	R	ACA1_209850	complement(join(<337346..337472,337569..337658,337791..337865,337957..338062,338154..338282,338429..338503,338651..>338786))	Acanthamoeba castellanii str. Neff	14918739
ACA1_209860	mRNA	ACA1_209860	NW_004457453.1	339018	341820	R	ACA1_209860	complement(join(<339018..339397,339516..339630,339719..339777,339899..339970,340105..340198,340286..340311,340397..340620,340753..340879,341032..341083,341226..341281,341375..341460,341564..341645,341772..>341820))	Acanthamoeba castellanii str. Neff	14918740
ACA1_209870	mRNA	ACA1_209870	NW_004457453.1	342604	344370	D	ACA1_209870	<342604..>344370	Acanthamoeba castellanii str. Neff	14918741
ACA1_209890	mRNA	ACA1_209890	NW_004457453.1	346546	356042	D	ACA1_209890	join(<346546..346734,346811..347107,347268..347657,347751..348057,348149..348704,348792..348957,349028..349139,349214..349922,351819..354429,354563..354719,354802..355287,355388..355646,355780..355919,356020..>356042)	Acanthamoeba castellanii str. Neff	14918743
ACA1_210100	mRNA	ACA1_210100	NW_004457453.1	358658	361786	R	ACA1_210100	complement(join(<358658..358855,359299..359418,359528..359625,359733..359835,359935..360129,360326..360414,360531..360645,360759..360967,361107..361246,361341..361368,361495..361576,361667..>361786))	Acanthamoeba castellanii str. Neff	14918744
ACA1_210110	mRNA	ACA1_210110	NW_004457453.1	361997	364425	R	ACA1_210110	complement(join(<361997..362224,362309..362470,362593..363069,363148..363309,363384..363526,363656..363899,363969..364126,364197..>364425))	Acanthamoeba castellanii str. Neff	14918745
ACA1_014490	mRNA	ACA1_014490	NW_004457451.1	26	3983	D	ACA1_014490	join(<26..211,364..448,470..549,620..705,794..951,1099..1198,1280..1377,1491..1606,1715..1852,1960..2108,2246..2357,2439..2641,2727..2837,2957..3052,3133..3344,3424..3489,3621..3742,3858..>3983)	Acanthamoeba castellanii str. Neff	14918636
ACA1_014500	mRNA	ACA1_014500	NW_004457451.1	4221	5288	D	ACA1_014500	<4221..>5288	Acanthamoeba castellanii str. Neff	14918634
ACA1_014510	mRNA	ACA1_014510	NW_004457451.1	5939	9048	R	ACA1_014510	complement(join(<5939..6061,6152..6268,6374..6487,6599..6710,6797..6905,6978..7142,7287..7466,7575..7714,7842..8012,8129..8231,8371..8447,8570..>9048))	Acanthamoeba castellanii str. Neff	14918635
ACA1_014520	mRNA	ACA1_014520	NW_004457451.1	9238	11760	R	ACA1_014520	complement(join(<9238..10817,10887..11138,11244..>11760))	Acanthamoeba castellanii str. Neff	14918633
ACA1_350700	mRNA	ACA1_350700	NW_004457449.1	42	889	R	ACA1_350700	complement(join(<42..368,385..765,884..>889))	Acanthamoeba castellanii str. Neff	14918629
ACA1_350710	mRNA	ACA1_350710	NW_004457449.1	1143	1959	D	ACA1_350710	join(<1143..1244,1361..1586,1675..1797,1865..>1959)	Acanthamoeba castellanii str. Neff	14918628
ACA1_350820	mRNA	ACA1_350820	NW_004457449.1	6167	8214	R	ACA1_350820	complement(join(<6167..6449,6554..6719,6823..6934,7044..7187,7295..7407,7488..7605,7705..7836,7957..>8214))	Acanthamoeba castellanii str. Neff	14918632
ACA1_350830	mRNA	ACA1_350830	NW_004457449.1	8568	9535	R	ACA1_350830	complement(join(<8568..9195,9315..>9535))	Acanthamoeba castellanii str. Neff	14918630
ACA1_350940	mRNA	ACA1_350940	NW_004457449.1	15740	16009	D	ACA1_350940	<15740..>16009	Acanthamoeba castellanii str. Neff	14918631
ACA1_312880	mRNA	ACA1_312880	NW_004457447.1	5252	6851	R	ACA1_312880	complement(join(<5252..5367,5451..5624,5702..5805,5884..6369,6439..6526,6587..6684,6751..>6851))	Acanthamoeba castellanii str. Neff	14918627
ACA1_313090	mRNA	ACA1_313090	NW_004457447.1	14234	16495	R	ACA1_313090	complement(join(<14234..14335,14422..14493,14587..14659,14763..14904,14997..15072,15165..15310,15389..15429,15995..16159,16243..16307,16412..>16495))	Acanthamoeba castellanii str. Neff	14918626
ACA1_308880	mRNA	ACA1_308880	NW_004457446.1	51	1189	D	ACA1_308880	join(<51..526,604..>1189)	Acanthamoeba castellanii str. Neff	14918625
ACA1_308990	mRNA	ACA1_308990	NW_004457446.1	5367	6344	R	ACA1_308990	complement(join(<5367..5633,5726..5856,5991..6071,6158..6288,6325..>6344))	Acanthamoeba castellanii str. Neff	14918624
ACA1_309100	mRNA	ACA1_309100	NW_004457446.1	6514	7351	R	ACA1_309100	complement(join(<6514..6668,6791..6899,7067..>7351))	Acanthamoeba castellanii str. Neff	14918623
ACA1_247940	mRNA	ACA1_247940	NW_004457445.1	575	974	D	ACA1_247940	join(<575..840,908..>974)	Acanthamoeba castellanii str. Neff	14918592
ACA1_247950	mRNA	ACA1_247950	NW_004457445.1	1461	1947	R	ACA1_247950	complement(join(<1461..1669,1750..1860,1938..>1947))	Acanthamoeba castellanii str. Neff	14918560
ACA1_248060	mRNA	ACA1_248060	NW_004457445.1	2532	4494	R	ACA1_248060	complement(join(<2532..2610,2682..2713,2970..3101,3163..3317,3414..>4494))	Acanthamoeba castellanii str. Neff	14918619
ACA1_248070	mRNA	ACA1_248070	NW_004457445.1	5743	6575	D	ACA1_248070	join(<5743..5954,6089..6205,6272..>6575)	Acanthamoeba castellanii str. Neff	14918620
ACA1_248080	mRNA	ACA1_248080	NW_004457445.1	8695	11535	R	ACA1_248080	complement(join(<8695..8739,8903..9076,9346..9501,9635..9691,9769..9909,9986..10146,10249..10416,10509..10635,10736..10849,10941..11008,11077..11179,11298..11375,11461..>11535))	Acanthamoeba castellanii str. Neff	14918621
ACA1_248190	mRNA	ACA1_248190	NW_004457445.1	12102	23543	D	ACA1_248190	join(<12102..12223,12320..12478,12580..12708,12799..12910,12991..13166,13258..13348,13421..13552,13689..14013,14115..14336,14427..14571,14647..14847,14897..15458,15747..15809,15899..17271,17371..17498,17553..17700,17802..17912,17999..18141,18224..18747,18847..18967,19070..19530,19618..19900,19997..20236,20353..20417,20513..20586,20661..20783,20876..20939,21028..21184,21284..21399,21487..21564,21637..21851,22001..22326,22418..22807,22873..22959,23032..>23543)	Acanthamoeba castellanii str. Neff	14918622
ACA1_248200	mRNA	ACA1_248200	NW_004457445.1	23748	25381	D	ACA1_248200	join(<23748..24176,24246..24344,24413..24521,24593..24859,24925..25037,25238..>25381)	Acanthamoeba castellanii str. Neff	14918579
ACA1_248210	mRNA	ACA1_248210	NW_004457445.1	25409	29703	R	ACA1_248210	complement(join(<25409..25471,25548..25688,25767..25927,26037..26204,26293..26419,26503..26616,26706..26773,26856..26958,27052..27129,27231..27329,27410..27571,27669..27719,27826..27979,28064..28149,28233..28400,28524..28601,28667..28745,28866..28977,29071..29231,29316..29431,29530..>29703))	Acanthamoeba castellanii str. Neff	14918580
ACA1_248220	mRNA	ACA1_248220	NW_004457445.1	29851	34289	R	ACA1_248220	complement(join(<29851..29913,29998..30138,30215..30375,30461..30628,30726..30852,30948..31061,31152..31219,31288..31390,31508..31585,31661..31759,31890..32051,32133..32187,32230..32418,32515..32600,32681..32845,32944..33021,33114..33192,33294..33405,33519..33679,33856..33971,34116..>34289))	Acanthamoeba castellanii str. Neff	14918581
ACA1_248230	mRNA	ACA1_248230	NW_004457445.1	34478	35506	R	ACA1_248230	complement(join(<34478..34539,34611..34739,34839..34918,34999..35071,35268..35359,35436..>35506))	Acanthamoeba castellanii str. Neff	14918582
ACA1_248340	mRNA	ACA1_248340	NW_004457445.1	35740	36126	D	ACA1_248340	<35740..>36126	Acanthamoeba castellanii str. Neff	14918583
ACA1_248350	mRNA	ACA1_248350	NW_004457445.1	36476	36832	R	ACA1_248350	complement(join(<36476..36615,36688..>36832))	Acanthamoeba castellanii str. Neff	14918584
ACA1_248360	mRNA	ACA1_248360	NW_004457445.1	36953	43813	R	ACA1_248360	complement(join(<36953..37138,37210..37325,37393..37522,37604..37668,37731..37966,38077..38347,38462..38642,38705..38817,38906..39062,39146..39253,39369..39467,39580..39674,39754..39888,39975..40026,40116..40252,40341..40420,40521..40629,40738..41057,41239..41349,41438..41575,41684..41742,41794..41816,41927..42075,42165..42364,42481..42585,42710..42807,42913..43064,43262..43328,43402..43519,43625..>43813))	Acanthamoeba castellanii str. Neff	14918585
ACA1_248370	mRNA	ACA1_248370	NW_004457445.1	44147	46869	D	ACA1_248370	join(<44147..44257,44342..44514,44537..44636,44683..44877,45029..45210,45314..45449,45561..45763,45850..46025,46123..46451,46675..>46869)	Acanthamoeba castellanii str. Neff	14918586
ACA1_248380	mRNA	ACA1_248380	NW_004457445.1	47016	51975	R	ACA1_248380	complement(join(<47016..47402,47467..47611,47701..48035,48261..48375,48461..48722,48912..49107,49315..49478,49603..49746,49857..49908,49998..50069,50151..50287,50431..50509,50650..50822,50945..51104,51181..51243,51332..51454,51540..51692,51788..51867,51966..>51975))	Acanthamoeba castellanii str. Neff	14918561
ACA1_248390	mRNA	ACA1_248390	NW_004457445.1	52671	54033	R	ACA1_248390	complement(join(<52671..52700,52725..52868,52978..53112,53224..53469,53532..53678,53789..53934,53994..>54033))	Acanthamoeba castellanii str. Neff	14918562
ACA1_248400	mRNA	ACA1_248400	NW_004457445.1	56197	57886	R	ACA1_248400	complement(join(<56197..56271,56367..56740,56806..56859,57002..57083,57120..57176,57266..57375,57444..57525,57623..57783,57850..>57886))	Acanthamoeba castellanii str. Neff	14918563
ACA1_248410	mRNA	ACA1_248410	NW_004457445.1	58726	69118	R	ACA1_248410	complement(join(<58726..58794,58881..59174,59352..59382,59452..59545,59619..59812,59895..59974,60077..60197,60305..60849,60929..61016,61122..61279,61368..61765,61838..62004,62073..62200,62279..62402,62489..62632,62739..62912,63015..63103,63189..63363,63449..63593,63682..63786,63913..64066,64141..64300,64381..64644,64716..64898,64970..65056,65130..65230,65298..65449,65566..65793,65876..66062,66152..66277,66348..66510,66584..66699,66773..66888,66959..67266,67340..67498,67533..67717,67782..67881,67959..68123,68223..68719,68825..68956,69071..>69118))	Acanthamoeba castellanii str. Neff	14918564
ACA1_248420	mRNA	ACA1_248420	NW_004457445.1	69286	69748	R	ACA1_248420	complement(join(<69286..69552,69653..>69748))	Acanthamoeba castellanii str. Neff	14918565
ACA1_248530	mRNA	ACA1_248530	NW_004457445.1	70276	72630	R	ACA1_248530	complement(join(<70276..70467,70552..70708,70783..70957,71056..71116,71198..71439,71509..71818,71872..72005,72086..72206,72358..>72630))	Acanthamoeba castellanii str. Neff	14918566
ACA1_248540	mRNA	ACA1_248540	NW_004457445.1	73041	73664	D	ACA1_248540	join(<73041..73049,73112..73235,73410..73487,73567..>73664)	Acanthamoeba castellanii str. Neff	14918567
ACA1_248560	mRNA	ACA1_248560	NW_004457445.1	79538	83647	R	ACA1_248560	complement(join(<79538..79645,79716..79848,79939..80737,80852..81314,81423..81498,81593..81705,81870..81968,82169..82244,82332..82444,82555..82711,82838..82989,83106..83329,83485..>83647))	Acanthamoeba castellanii str. Neff	14918569
ACA1_248570	mRNA	ACA1_248570	NW_004457445.1	84875	87156	R	ACA1_248570	complement(join(<84875..84959,85116..85222,85356..85468,85628..85768,85852..85991,86092..86237,86319..86427,86526..86614,86709..86914,86985..>87156))	Acanthamoeba castellanii str. Neff	14918570
ACA1_248580	mRNA	ACA1_248580	NW_004457445.1	87423	90761	R	ACA1_248580	complement(join(<87423..87590,87678..87787,87864..88486,88579..89249,89348..89509,89628..89775,89859..90287,90391..90473,90564..>90761))	Acanthamoeba castellanii str. Neff	14918571
ACA1_248590	mRNA	ACA1_248590	NW_004457445.1	91331	92793	R	ACA1_248590	complement(join(<91331..91799,91831..91919,92011..92474,92568..92666,92766..>92793))	Acanthamoeba castellanii str. Neff	14918572
ACA1_248600	mRNA	ACA1_248600	NW_004457445.1	93253	94780	D	ACA1_248600	join(<93253..93354,93480..93525,93626..93706,93780..94444,94516..94650,94727..>94780)	Acanthamoeba castellanii str. Neff	14918573
ACA1_248610	mRNA	ACA1_248610	NW_004457445.1	95026	95757	D	ACA1_248610	<95026..>95757	Acanthamoeba castellanii str. Neff	14918574
ACA1_248620	mRNA	ACA1_248620	NW_004457445.1	96252	98253	D	ACA1_248620	join(<96252..96260,96307..96425,96500..96624,96751..96899,97002..97172,97278..97747,97824..98026,98090..>98253)	Acanthamoeba castellanii str. Neff	14918575
ACA1_248630	mRNA	ACA1_248630	NW_004457445.1	98403	100016	D	ACA1_248630	join(<98403..98586,98692..98823,98932..99219,99325..99506,99582..>100016)	Acanthamoeba castellanii str. Neff	14918576
ACA1_248640	mRNA	ACA1_248640	NW_004457445.1	100466	101792	D	ACA1_248640	join(<100466..100650,100758..100992,101205..>101792)	Acanthamoeba castellanii str. Neff	14918577
ACA1_248650	mRNA	ACA1_248650	NW_004457445.1	102247	103823	D	ACA1_248650	join(<102247..102338,102406..102562,102681..102778,102932..103047,103125..103291,103410..>103823)	Acanthamoeba castellanii str. Neff	14918578
ACA1_248660	mRNA	ACA1_248660	NW_004457445.1	103886	105927	R	ACA1_248660	complement(join(<103886..103978,104069..104298,104382..104837,104964..>105927))	Acanthamoeba castellanii str. Neff	14918593
ACA1_248670	mRNA	ACA1_248670	NW_004457445.1	106275	107817	R	ACA1_248670	complement(join(<106275..106598,106722..106904,106976..107088,107171..107329,107387..107468,107577..107639,107749..>107817))	Acanthamoeba castellanii str. Neff	14918594
ACA1_248680	mRNA	ACA1_248680	NW_004457445.1	108455	117342	D	ACA1_248680	join(<108455..109934,110021..110138,110239..110410,110485..110570,110655..110746,110844..110948,111109..111260,111342..111505,111600..111742,111854..111982,112269..112383,112490..112605,112729..112976,113060..113695,113767..113844,113996..114075,114196..114379,114475..114614,114692..114821,114907..115110,115193..115373,115451..115674,115852..>117342)	Acanthamoeba castellanii str. Neff	14918595
ACA1_248690	mRNA	ACA1_248690	NW_004457445.1	117780	121833	R	ACA1_248690	complement(join(<117780..118453,118555..118702,118790..118915,119005..119215,119343..120517,120716..120787,120877..121104,121191..121307,121366..>121833))	Acanthamoeba castellanii str. Neff	14918596
ACA1_248800	mRNA	ACA1_248800	NW_004457445.1	122317	122907	D	ACA1_248800	<122317..>122907	Acanthamoeba castellanii str. Neff	14918597
ACA1_248810	mRNA	ACA1_248810	NW_004457445.1	123542	124682	R	ACA1_248810	complement(join(<123542..123695,123793..123917,124016..124208,124299..124380,124453..124524,124595..>124682))	Acanthamoeba castellanii str. Neff	14918598
ACA1_248820	mRNA	ACA1_248820	NW_004457445.1	125571	132382	D	ACA1_248820	join(<125571..125631,125694..125764,125844..125879,125976..126098,126170..126472,126548..126632,126732..126961,127116..127260,127344..127456,127530..127763,127850..128108,128180..128327,128422..129061,129231..129589,129699..129840,129931..130310,130421..130845,130997..131331,131432..131600,131694..131999,132090..>132382)	Acanthamoeba castellanii str. Neff	14918599
ACA1_248830	mRNA	ACA1_248830	NW_004457445.1	132523	134693	R	ACA1_248830	complement(join(<132523..132641,132772..133090,133215..133273,133363..133490,133620..133656,133958..>134693))	Acanthamoeba castellanii str. Neff	14918600
ACA1_248840	mRNA	ACA1_248840	NW_004457445.1	134787	135897	R	ACA1_248840	complement(join(<134787..135257,135276..135424,135502..135673,135772..>135897))	Acanthamoeba castellanii str. Neff	14918601
ACA1_248850	mRNA	ACA1_248850	NW_004457445.1	135946	136869	R	ACA1_248850	complement(join(<135946..135986,136062..136167,136264..136376,136470..136642,136751..>136869))	Acanthamoeba castellanii str. Neff	14918602
ACA1_248860	mRNA	ACA1_248860	NW_004457445.1	137256	138071	D	ACA1_248860	join(<137256..137382,137493..137619,137683..137880,138005..>138071)	Acanthamoeba castellanii str. Neff	14918603
ACA1_248870	mRNA	ACA1_248870	NW_004457445.1	139017	139858	R	ACA1_248870	complement(join(<139017..139147,139266..139373,139462..>139858))	Acanthamoeba castellanii str. Neff	14918604
ACA1_248880	mRNA	ACA1_248880	NW_004457445.1	139873	140476	R	ACA1_248880	complement(join(<139873..139998,140228..>140476))	Acanthamoeba castellanii str. Neff	14918605
ACA1_248990	mRNA	ACA1_248990	NW_004457445.1	141212	141673	R	ACA1_248990	complement(join(<141212..141249,141463..>141673))	Acanthamoeba castellanii str. Neff	14918606
ACA1_249100	mRNA	ACA1_249100	NW_004457445.1	141924	142811	R	ACA1_249100	complement(<141924..>142811)	Acanthamoeba castellanii str. Neff	14918607
ACA1_249120	mRNA	ACA1_249120	NW_004457445.1	144510	144768	R	ACA1_249120	complement(join(<144510..144589,144600..>144768))	Acanthamoeba castellanii str. Neff	14918609
ACA1_249130	mRNA	ACA1_249130	NW_004457445.1	145014	146567	R	ACA1_249130	complement(join(<145014..145107,145174..145441,145520..145646,145737..145901,145974..146071,146139..146144,146346..146394,146505..>146567))	Acanthamoeba castellanii str. Neff	14918610
ACA1_249150	mRNA	ACA1_249150	NW_004457445.1	152437	153353	R	ACA1_249150	complement(join(<152437..152479,152581..152726,153318..>153353))	Acanthamoeba castellanii str. Neff	14918612
ACA1_249160	mRNA	ACA1_249160	NW_004457445.1	153966	155470	R	ACA1_249160	complement(join(<153966..154806,154818..>155470))	Acanthamoeba castellanii str. Neff	14918613
ACA1_249170	mRNA	ACA1_249170	NW_004457445.1	156428	157651	D	ACA1_249170	join(<156428..156739,156963..157287,157350..>157651)	Acanthamoeba castellanii str. Neff	14918614
ACA1_249280	mRNA	ACA1_249280	NW_004457445.1	158109	159778	R	ACA1_249280	complement(join(<158109..158303,158371..158688,158906..159072,159141..159151,159166..159320,159377..159689,159768..>159778))	Acanthamoeba castellanii str. Neff	14918615
ACA1_249290	mRNA	ACA1_249290	NW_004457445.1	160442	162312	D	ACA1_249290	join(<160442..161578,161642..161749,161811..162121,162189..>162312)	Acanthamoeba castellanii str. Neff	14918616
ACA1_249310	mRNA	ACA1_249310	NW_004457445.1	165191	166548	D	ACA1_249310	join(<165191..165227,165319..165907,165921..165949,166022..>166548)	Acanthamoeba castellanii str. Neff	14918618
ACA1_249320	mRNA	ACA1_249320	NW_004457445.1	167107	168546	D	ACA1_249320	<167107..>168546	Acanthamoeba castellanii str. Neff	14918587
ACA1_249330	mRNA	ACA1_249330	NW_004457445.1	168844	170068	D	ACA1_249330	join(<168844..168983,169078..169186,169254..169364,169462..169531,169616..169763,169900..>170068)	Acanthamoeba castellanii str. Neff	14918588
ACA1_249340	mRNA	ACA1_249340	NW_004457445.1	170186	170979	D	ACA1_249340	join(<170186..170293,170357..170439,170525..170654,170839..>170979)	Acanthamoeba castellanii str. Neff	14918589
ACA1_249350	mRNA	ACA1_249350	NW_004457445.1	171066	172704	R	ACA1_249350	complement(join(<171066..171125,171248..171342,171454..171605,171688..171731,171845..172051,172158..172233,172568..>172704))	Acanthamoeba castellanii str. Neff	14918590
ACA1_249460	mRNA	ACA1_249460	NW_004457445.1	176174	180028	D	ACA1_249460	join(<176174..176234,176512..176665,176775..176927,177010..177154,179019..179142,179275..179470,179544..179785,179829..>180028)	Acanthamoeba castellanii str. Neff	14918591
ACA1_029360	mRNA	ACA1_029360	NW_004457444.1	326	800	R	ACA1_029360	complement(join(<326..415,532..654,741..>800))	Acanthamoeba castellanii str. Neff	14918557
ACA1_029370	mRNA	ACA1_029370	NW_004457444.1	1203	2712	D	ACA1_029370	join(<1203..1403,1574..1659,1772..1878,2026..2169,2259..2505,2619..>2712)	Acanthamoeba castellanii str. Neff	14918554
ACA1_029380	mRNA	ACA1_029380	NW_004457444.1	2890	5300	D	ACA1_029380	join(<2890..3016,3126..3218,3311..3476,3569..3653,3772..3874,4053..4162,4275..4400,4523..4617,4745..4807,4877..4933,5036..5130,5200..>5300)	Acanthamoeba castellanii str. Neff	14918558
ACA1_029390	mRNA	ACA1_029390	NW_004457444.1	5434	9187	R	ACA1_029390	complement(join(<5434..5503,5598..5713,5806..5907,6018..6108,6191..6319,6368..6408,6473..6565,6702..6843,6959..7087,7193..7254,7422..7482,7610..7761,7979..8103,8197..8341,8559..8729,9143..>9187))	Acanthamoeba castellanii str. Neff	14918559
ACA1_029400	mRNA	ACA1_029400	NW_004457444.1	9058	10027	D	ACA1_029400	join(<9058..9542,9670..>10027)	Acanthamoeba castellanii str. Neff	14918556
ACA1_029410	mRNA	ACA1_029410	NW_004457444.1	10085	10551	R	ACA1_029410	complement(<10085..>10551)	Acanthamoeba castellanii str. Neff	14918555
ACA1_316120	mRNA	ACA1_316120	NW_004457443.1	8121	8582	D	ACA1_316120	join(<8121..8132,8208..>8582)	Acanthamoeba castellanii str. Neff	14918552
ACA1_316230	mRNA	ACA1_316230	NW_004457443.1	11228	11820	D	ACA1_316230	join(<11228..11299,11440..>11820)	Acanthamoeba castellanii str. Neff	14918553
ACA1_316340	mRNA	ACA1_316340	NW_004457443.1	13871	15963	R	ACA1_316340	complement(join(<13871..14012,14092..14472,14597..14732,14829..14994,15245..15269,15372..15482,15618..15735,15852..>15963))	Acanthamoeba castellanii str. Neff	14918551
ACA1_316550	mRNA	ACA1_316550	NW_004457443.1	17023	19553	D	ACA1_316550	join(<17023..17067,17198..17260,17280..17313,17375..17523,17602..17684,17807..18031,18125..18209,18287..18351,18644..18697,18786..18843,18913..19034,19388..>19553)	Acanthamoeba castellanii str. Neff	14918550
ACA1_056770	mRNA	ACA1_056770	NW_004457442.1	670	975	D	ACA1_056770	join(<670..728,792..>975)	Acanthamoeba castellanii str. Neff	14917895
ACA1_056880	mRNA	ACA1_056880	NW_004457442.1	2040	2528	R	ACA1_056880	complement(<2040..>2528)	Acanthamoeba castellanii str. Neff	14918320
ACA1_056890	mRNA	ACA1_056890	NW_004457442.1	4696	5460	D	ACA1_056890	join(<4696..4893,4909..>5460)	Acanthamoeba castellanii str. Neff	14918156
ACA1_056900	mRNA	ACA1_056900	NW_004457442.1	6590	6841	D	ACA1_056900	<6590..>6841	Acanthamoeba castellanii str. Neff	14918157
ACA1_056910	mRNA	ACA1_056910	NW_004457442.1	8487	8846	D	ACA1_056910	<8487..>8846	Acanthamoeba castellanii str. Neff	14918535
ACA1_056920	mRNA	ACA1_056920	NW_004457442.1	9210	9569	D	ACA1_056920	<9210..>9569	Acanthamoeba castellanii str. Neff	14918536
ACA1_056940	mRNA	ACA1_056940	NW_004457442.1	10533	11701	D	ACA1_056940	join(<10533..10944,11021..11300,11427..11544,11669..>11701)	Acanthamoeba castellanii str. Neff	14918538
ACA1_056950	mRNA	ACA1_056950	NW_004457442.1	12159	13532	D	ACA1_056950	join(<12159..12479,12519..>13532)	Acanthamoeba castellanii str. Neff	14918539
ACA1_056960	mRNA	ACA1_056960	NW_004457442.1	13595	14619	D	ACA1_056960	join(<13595..13694,13720..13778,13978..>14619)	Acanthamoeba castellanii str. Neff	14918540
ACA1_056970	mRNA	ACA1_056970	NW_004457442.1	14973	16041	R	ACA1_056970	complement(join(<14973..15029,15127..>16041))	Acanthamoeba castellanii str. Neff	14918541
ACA1_056980	mRNA	ACA1_056980	NW_004457442.1	19081	19440	D	ACA1_056980	<19081..>19440	Acanthamoeba castellanii str. Neff	14918542
ACA1_056990	mRNA	ACA1_056990	NW_004457442.1	19795	20049	D	ACA1_056990	join(<19795..19930,19970..>20049)	Acanthamoeba castellanii str. Neff	14918543
ACA1_057000	mRNA	ACA1_057000	NW_004457442.1	20362	21261	D	ACA1_057000	<20362..>21261	Acanthamoeba castellanii str. Neff	14918544
ACA1_057010	mRNA	ACA1_057010	NW_004457442.1	21275	22776	R	ACA1_057010	complement(join(<21275..21966,22068..22191,22246..>22776))	Acanthamoeba castellanii str. Neff	14918545
ACA1_057020	mRNA	ACA1_057020	NW_004457442.1	22867	23839	D	ACA1_057020	join(<22867..23569,23649..>23839)	Acanthamoeba castellanii str. Neff	14918546
ACA1_057030	mRNA	ACA1_057030	NW_004457442.1	24190	25455	D	ACA1_057030	<24190..>25455	Acanthamoeba castellanii str. Neff	14918547
ACA1_057040	mRNA	ACA1_057040	NW_004457442.1	26443	27421	R	ACA1_057040	complement(join(<26443..26707,26727..>27421))	Acanthamoeba castellanii str. Neff	14918548
ACA1_057050	mRNA	ACA1_057050	NW_004457442.1	29262	31219	R	ACA1_057050	complement(join(<29262..29421,29507..29588,29676..29914,29996..30254,30338..30498,30565..30655,30728..30943,31039..>31219))	Acanthamoeba castellanii str. Neff	14918549
ACA1_057060	mRNA	ACA1_057060	NW_004457442.1	31816	35634	R	ACA1_057060	complement(join(<31816..32035,32146..32323,32407..32587,32674..32850,32949..33188,33447..33638,33727..33790,33883..33963,34046..34167,34336..34490,34583..34625,34703..34830,34983..35153,35260..35412,35514..>35634))	Acanthamoeba castellanii str. Neff	14918040
ACA1_057070	mRNA	ACA1_057070	NW_004457442.1	36446	37334	R	ACA1_057070	complement(join(<36446..36497,36653..36803,37067..>37334))	Acanthamoeba castellanii str. Neff	14918041
ACA1_057080	mRNA	ACA1_057080	NW_004457442.1	38104	39825	R	ACA1_057080	complement(join(<38104..38313,38441..38540,38634..38809,39162..39507,39614..>39825))	Acanthamoeba castellanii str. Neff	14918042
ACA1_057090	mRNA	ACA1_057090	NW_004457442.1	39939	41506	R	ACA1_057090	complement(join(<39939..40070,40137..40232,40300..40383,40456..40590,40698..40738,40843..40990,41120..41191,41287..41348,41452..>41506))	Acanthamoeba castellanii str. Neff	14918043
ACA1_057100	mRNA	ACA1_057100	NW_004457442.1	41584	46562	R	ACA1_057100	complement(join(<41584..42216,42291..42449,42535..42818,42896..42974,43087..43181,43275..43350,43417..43523,43605..43671,43772..43904,43988..44082,44147..44248,44342..44480,44550..44589,44672..44807,44904..44995,45089..45176,45278..45445,45523..45567,45659..45958,46085..46221,46367..>46562))	Acanthamoeba castellanii str. Neff	14918044
ACA1_057110	mRNA	ACA1_057110	NW_004457442.1	46838	49756	R	ACA1_057110	complement(join(<46838..47217,47278..47322,47394..47577,47664..48018,48092..48302,48383..48401,48488..48663,48732..48807,48880..49048,49143..49338,49501..49599,49678..>49756))	Acanthamoeba castellanii str. Neff	14918045
ACA1_057120	mRNA	ACA1_057120	NW_004457442.1	51971	53833	D	ACA1_057120	join(<51971..52153,52224..52368,52442..52528,52617..52677,52758..52892,52973..53096,53163..53280,53376..53518,53591..>53833)	Acanthamoeba castellanii str. Neff	14918046
ACA1_057130	mRNA	ACA1_057130	NW_004457442.1	53942	55567	R	ACA1_057130	complement(join(<53942..54147,54219..54314,54439..54606,54686..54949,55013..55175,55299..55399,55504..>55567))	Acanthamoeba castellanii str. Neff	14918047
ACA1_057140	mRNA	ACA1_057140	NW_004457442.1	55704	58192	D	ACA1_057140	join(<55704..56208,56370..56522,56663..56839,56944..57071,57150..57195,57277..57353,57435..57627,57716..57886,57997..58055,58166..>58192)	Acanthamoeba castellanii str. Neff	14918048
ACA1_057150	mRNA	ACA1_057150	NW_004457442.1	58507	62184	D	ACA1_057150	join(<58507..59743,59861..60013,60123..60455,60501..60663,60764..60854,60941..61013,61107..61231,61312..61397,61491..>62184)	Acanthamoeba castellanii str. Neff	14918158
ACA1_057160	mRNA	ACA1_057160	NW_004457442.1	62302	63276	R	ACA1_057160	complement(join(<62302..62542,62620..62755,62851..62933,63035..>63276))	Acanthamoeba castellanii str. Neff	14918159
ACA1_057170	mRNA	ACA1_057170	NW_004457442.1	64005	67036	R	ACA1_057170	complement(join(<64005..64109,64213..64327,64398..64463,64556..64727,64842..64916,65053..65911,65960..66157,66303..66424,66500..66629,66740..>67036))	Acanthamoeba castellanii str. Neff	14918160
ACA1_057180	mRNA	ACA1_057180	NW_004457442.1	67543	68846	D	ACA1_057180	join(<67543..68097,68164..68304,68400..>68846)	Acanthamoeba castellanii str. Neff	14918161
ACA1_057200	mRNA	ACA1_057200	NW_004457442.1	82039	84465	R	ACA1_057200	complement(join(<82039..82083,82162..82249,82325..82404,82493..82727,82850..83026,83146..83300,83386..83441,83518..83597,83711..83870,83953..84289,84433..>84465))	Acanthamoeba castellanii str. Neff	14918163
ACA1_057210	mRNA	ACA1_057210	NW_004457442.1	84654	85575	R	ACA1_057210	complement(join(<84654..84801,84884..85003,85118..>85575))	Acanthamoeba castellanii str. Neff	14918164
ACA1_057220	mRNA	ACA1_057220	NW_004457442.1	85755	86855	R	ACA1_057220	complement(<85755..>86855)	Acanthamoeba castellanii str. Neff	14918165
ACA1_057230	mRNA	ACA1_057230	NW_004457442.1	87661	92570	D	ACA1_057230	join(<87661..88759,88841..89137,89234..89368,89451..89816,89879..89951,90115..90304,90379..90691,90775..90882,90962..91088,91332..91500,91524..91827,91913..91952,92035..92127,92234..>92570)	Acanthamoeba castellanii str. Neff	14918166
ACA1_057240	mRNA	ACA1_057240	NW_004457442.1	93120	96183	R	ACA1_057240	complement(join(<93120..93229,93335..93466,93568..93792,93915..93987,94042..94130,94241..94399,94495..94567,94657..95023,95117..95296,95388..95471,95568..95634,95756..95884,96033..>96183))	Acanthamoeba castellanii str. Neff	14918167
ACA1_057250	mRNA	ACA1_057250	NW_004457442.1	96538	98802	R	ACA1_057250	complement(join(<96538..96705,96752..96888,96983..97203,97368..97440,97509..97669,97744..97916,97983..98252,98647..>98802))	Acanthamoeba castellanii str. Neff	14918168
ACA1_057270	mRNA	ACA1_057270	NW_004457442.1	110923	111423	D	ACA1_057270	join(<110923..110958,111250..>111423)	Acanthamoeba castellanii str. Neff	14918170
ACA1_057280	mRNA	ACA1_057280	NW_004457442.1	111603	114443	D	ACA1_057280	join(<111603..111687,111762..111868,111953..112042,112111..112201,112264..112362,112462..112605,112677..112740,112827..112878,112951..113008,113076..113233,113321..113469,113529..113619,113694..113789,113861..113968,114032..114143,114226..>114443)	Acanthamoeba castellanii str. Neff	14918171
ACA1_057290	mRNA	ACA1_057290	NW_004457442.1	114631	116277	R	ACA1_057290	complement(join(<114631..114696,114780..114938,115037..115117,115304..115311,115324..115496,115577..115647,115759..>116277))	Acanthamoeba castellanii str. Neff	14918172
ACA1_057300	mRNA	ACA1_057300	NW_004457442.1	116458	117450	D	ACA1_057300	<116458..>117450	Acanthamoeba castellanii str. Neff	14918173
ACA1_057310	mRNA	ACA1_057310	NW_004457442.1	117529	118724	R	ACA1_057310	complement(join(<117529..117701,117814..117943,118013..118159,118288..118395,118524..>118724))	Acanthamoeba castellanii str. Neff	14918174
ACA1_057320	mRNA	ACA1_057320	NW_004457442.1	118853	120562	R	ACA1_057320	complement(join(<118853..119142,119219..119832,119910..120021,120096..120211,120297..>120562))	Acanthamoeba castellanii str. Neff	14918175
ACA1_057330	mRNA	ACA1_057330	NW_004457442.1	120823	121521	D	ACA1_057330	<120823..>121521	Acanthamoeba castellanii str. Neff	14918176
ACA1_057340	mRNA	ACA1_057340	NW_004457442.1	121728	122360	R	ACA1_057340	complement(<121728..>122360)	Acanthamoeba castellanii str. Neff	14918177
ACA1_057360	mRNA	ACA1_057360	NW_004457442.1	123123	124431	D	ACA1_057360	join(<123123..123236,123302..123410,123516..123661,123725..123788,123876..123934,124040..124235,124358..>124431)	Acanthamoeba castellanii str. Neff	14918179
ACA1_057370	mRNA	ACA1_057370	NW_004457442.1	124563	129438	D	ACA1_057370	join(<124563..124650,124765..125008,125133..>129438)	Acanthamoeba castellanii str. Neff	14918180
ACA1_057380	mRNA	ACA1_057380	NW_004457442.1	129540	130196	R	ACA1_057380	complement(<129540..>130196)	Acanthamoeba castellanii str. Neff	14918181
ACA1_057390	mRNA	ACA1_057390	NW_004457442.1	130505	131245	R	ACA1_057390	complement(join(<130505..130707,130834..>131245))	Acanthamoeba castellanii str. Neff	14918448
ACA1_057400	mRNA	ACA1_057400	NW_004457442.1	131509	135751	D	ACA1_057400	join(<131509..131962,132086..132202,132302..132472,132571..132645,132714..132788,132880..132948,133025..133111,133226..133357,133470..133871,133945..134067,134481..134633,134764..134922,135004..135093,135207..135485,135702..>135751)	Acanthamoeba castellanii str. Neff	14918449
ACA1_057410	mRNA	ACA1_057410	NW_004457442.1	135839	136473	R	ACA1_057410	complement(join(<135839..135966,136036..136140,136206..>136473))	Acanthamoeba castellanii str. Neff	14918450
ACA1_057420	mRNA	ACA1_057420	NW_004457442.1	137157	139524	D	ACA1_057420	join(<137157..137690,137793..138065,138173..138447,138513..139009,139088..>139524)	Acanthamoeba castellanii str. Neff	14918451
ACA1_057430	mRNA	ACA1_057430	NW_004457442.1	139613	142076	R	ACA1_057430	complement(join(<139613..140169,140269..140398,140478..140621,140699..140798,140901..141113,141204..141406,141576..>142076))	Acanthamoeba castellanii str. Neff	14918452
ACA1_057440	mRNA	ACA1_057440	NW_004457442.1	142200	143908	D	ACA1_057440	join(<142200..142547,142631..142748,142988..143305,143421..143593,143705..>143908)	Acanthamoeba castellanii str. Neff	14918453
ACA1_057450	mRNA	ACA1_057450	NW_004457442.1	144302	145268	D	ACA1_057450	join(<144302..144453,144543..144661,144804..145030,145140..>145268)	Acanthamoeba castellanii str. Neff	14918454
ACA1_057460	mRNA	ACA1_057460	NW_004457442.1	145341	147916	R	ACA1_057460	complement(join(<145341..145497,145599..145729,145890..147412,147513..147564,147731..>147916))	Acanthamoeba castellanii str. Neff	14918455
ACA1_057470	mRNA	ACA1_057470	NW_004457442.1	148062	149145	R	ACA1_057470	complement(join(<148062..148395,148508..>149145))	Acanthamoeba castellanii str. Neff	14918456
ACA1_057490	mRNA	ACA1_057490	NW_004457442.1	150513	152552	R	ACA1_057490	complement(join(<150513..150616,150699..150851,150919..150994,151072..151184,151275..151390,151470..151582,151678..151781,151867..151933,152012..152131,152229..>152552))	Acanthamoeba castellanii str. Neff	14918458
ACA1_057500	mRNA	ACA1_057500	NW_004457442.1	153347	153711	D	ACA1_057500	join(<153347..153423,153508..153597,153660..>153711)	Acanthamoeba castellanii str. Neff	14918459
ACA1_057510	mRNA	ACA1_057510	NW_004457442.1	154021	155617	R	ACA1_057510	complement(join(<154021..154226,154296..154490,154572..154669,154749..154874,155043..155178,155449..>155617))	Acanthamoeba castellanii str. Neff	14918460
ACA1_057520	mRNA	ACA1_057520	NW_004457442.1	156003	159343	D	ACA1_057520	join(<156003..156147,156244..156398,156468..156542,156618..156713,156762..156871,156941..157412,157495..157636,157738..158538,158607..158722,158808..158895,158979..>159343)	Acanthamoeba castellanii str. Neff	14918461
ACA1_057530	mRNA	ACA1_057530	NW_004457442.1	159641	162495	D	ACA1_057530	join(<159641..159728,159850..159878,159990..160048,160148..160236,160399..160469,160554..160613,160690..160818,160961..161081,161174..161334,161430..161660,161748..161893,162115..162230,162332..>162495)	Acanthamoeba castellanii str. Neff	14918462
ACA1_057540	mRNA	ACA1_057540	NW_004457442.1	163004	164948	D	ACA1_057540	join(<163004..163063,163202..163356,163433..163762,163926..164233,164313..164477,164560..164619,164848..>164948)	Acanthamoeba castellanii str. Neff	14918463
ACA1_057550	mRNA	ACA1_057550	NW_004457442.1	164297	165683	R	ACA1_057550	complement(join(<164297..164461,164532..164678,164859..164960,165070..165146,165202..165242,165408..165472,165552..>165683))	Acanthamoeba castellanii str. Neff	14918464
ACA1_057560	mRNA	ACA1_057560	NW_004457442.1	166306	167567	R	ACA1_057560	complement(join(<166306..166379,166563..166812,167031..167221,167276..>167567))	Acanthamoeba castellanii str. Neff	14918465
ACA1_057570	mRNA	ACA1_057570	NW_004457442.1	169036	170202	D	ACA1_057570	join(<169036..169126,169159..169226,169283..169462,169530..169697,169915..>170202)	Acanthamoeba castellanii str. Neff	14918466
ACA1_057780	mRNA	ACA1_057780	NW_004457442.1	177260	177769	R	ACA1_057780	complement(join(<177260..177288,177625..>177769))	Acanthamoeba castellanii str. Neff	14918467
ACA1_057790	mRNA	ACA1_057790	NW_004457442.1	179297	180306	D	ACA1_057790	join(<179297..179391,179505..179612,179702..179913,180011..>180306)	Acanthamoeba castellanii str. Neff	14918468
ACA1_057800	mRNA	ACA1_057800	NW_004457442.1	180813	182052	R	ACA1_057800	complement(join(<180813..181157,181235..181668,181788..>182052))	Acanthamoeba castellanii str. Neff	14918469
ACA1_057810	mRNA	ACA1_057810	NW_004457442.1	183529	186216	D	ACA1_057810	join(<183529..183645,183754..183861,184007..184127,184234..184325,184393..184485,184559..184621,184723..184811,184881..184940,185049..185150,185228..185351,185447..185458,185537..185673,185746..185832,185973..>186216)	Acanthamoeba castellanii str. Neff	14918470
ACA1_057820	mRNA	ACA1_057820	NW_004457442.1	186259	187784	R	ACA1_057820	complement(join(<186259..186380,186558..186668,186781..186866,186951..187025,187137..187302,187400..187630,187697..>187784))	Acanthamoeba castellanii str. Neff	14918471
ACA1_057830	mRNA	ACA1_057830	NW_004457442.1	188219	189390	D	ACA1_057830	join(<188219..188270,188433..188700,188775..188871,188956..189045,189109..>189390)	Acanthamoeba castellanii str. Neff	14918346
ACA1_057840	mRNA	ACA1_057840	NW_004457442.1	189568	193205	D	ACA1_057840	join(<189568..189790,189929..190012,190041..190631,190724..190879,190953..191055,191128..191221,191340..191466,191556..191701,191785..191853,191920..192002,192081..192282,192367..192488,192557..192649,192722..192787,192857..192935,193041..>193205)	Acanthamoeba castellanii str. Neff	14918347
ACA1_057850	mRNA	ACA1_057850	NW_004457442.1	193229	194482	D	ACA1_057850	join(<193229..193845,193912..>194482)	Acanthamoeba castellanii str. Neff	14918348
ACA1_057860	mRNA	ACA1_057860	NW_004457442.1	194554	196762	D	ACA1_057860	join(<194554..194920,195047..195151,195243..195329,195410..195466,195549..195617,195704..196149,196276..196561,196579..196599,196659..>196762)	Acanthamoeba castellanii str. Neff	14918349
ACA1_057870	mRNA	ACA1_057870	NW_004457442.1	197876	198994	R	ACA1_057870	complement(join(<197876..198211,198289..198528,198608..>198994))	Acanthamoeba castellanii str. Neff	14918350
ACA1_057880	mRNA	ACA1_057880	NW_004457442.1	199030	200589	R	ACA1_057880	complement(join(<199030..199157,199239..199437,199578..199750,199827..199922,200012..200159,200244..200359,200439..>200589))	Acanthamoeba castellanii str. Neff	14918351
ACA1_057890	mRNA	ACA1_057890	NW_004457442.1	202350	204661	R	ACA1_057890	complement(join(<202350..202468,202645..202800,202862..203231,203402..203529,203591..203870,203949..204055,204468..204522,204623..>204661))	Acanthamoeba castellanii str. Neff	14918352
ACA1_057900	mRNA	ACA1_057900	NW_004457442.1	205322	205414	R	ACA1_057900	complement(<205322..>205414)	Acanthamoeba castellanii str. Neff	14918353
ACA1_057910	mRNA	ACA1_057910	NW_004457442.1	206585	207137	D	ACA1_057910	join(<206585..206683,206832..>207137)	Acanthamoeba castellanii str. Neff	14918354
ACA1_057920	mRNA	ACA1_057920	NW_004457442.1	207211	207540	D	ACA1_057920	join(<207211..207378,207460..>207540)	Acanthamoeba castellanii str. Neff	14918355
ACA1_057930	mRNA	ACA1_057930	NW_004457442.1	210220	210739	R	ACA1_057930	complement(join(<210220..210429,210518..210631,210698..>210739))	Acanthamoeba castellanii str. Neff	14918356
ACA1_057940	mRNA	ACA1_057940	NW_004457442.1	211883	216586	D	ACA1_057940	join(<211883..211987,212201..212325,212393..212547,212639..212719,212797..212853,212942..213070,213174..213312,213396..213555,213641..213767,213843..213964,214039..214102,214166..214420,214485..214671,214752..214919,214999..215141,215237..215358,215437..215630,215718..215772,215852..216037,216104..216418,216488..>216586)	Acanthamoeba castellanii str. Neff	14918357
ACA1_057950	mRNA	ACA1_057950	NW_004457442.1	216660	217364	R	ACA1_057950	complement(join(<216660..217148,217188..>217364))	Acanthamoeba castellanii str. Neff	14918358
ACA1_057960	mRNA	ACA1_057960	NW_004457442.1	217625	223413	D	ACA1_057960	join(<217625..217683,217739..217824,217961..218113,218157..218209,218282..218335,218456..218545,218653..218784,218882..218992,219058..219195,219296..219381,219502..220116,220197..220346,220433..220538,220600..220706,220785..220842,220937..221017,221106..221233,221358..221408,221535..221722,221809..221904,221969..222072,222193..222244,222333..222422,222503..222582,222661..>223413)	Acanthamoeba castellanii str. Neff	14918359
ACA1_057970	mRNA	ACA1_057970	NW_004457442.1	223575	224800	R	ACA1_057970	complement(join(<223575..223763,223862..224012,224098..224368,224452..224601,224707..>224800))	Acanthamoeba castellanii str. Neff	14918360
ACA1_057980	mRNA	ACA1_057980	NW_004457442.1	225805	226615	R	ACA1_057980	complement(join(<225805..225835,226041..>226615))	Acanthamoeba castellanii str. Neff	14918361
ACA1_057990	mRNA	ACA1_057990	NW_004457442.1	227027	228092	R	ACA1_057990	complement(join(<227027..227067,227133..227235,227612..227961,228041..>228092))	Acanthamoeba castellanii str. Neff	14918362
ACA1_058000	mRNA	ACA1_058000	NW_004457442.1	228550	229763	D	ACA1_058000	join(<228550..228814,228900..229120,229230..229352,229430..229524,229607..>229763)	Acanthamoeba castellanii str. Neff	14918363
ACA1_058010	mRNA	ACA1_058010	NW_004457442.1	229954	231637	D	ACA1_058010	join(<229954..230098,230273..230331,230402..230545,230639..230752,230867..230991,231075..231275,231348..231439,231522..>231637)	Acanthamoeba castellanii str. Neff	14918364
ACA1_058020	mRNA	ACA1_058020	NW_004457442.1	231853	232881	R	ACA1_058020	complement(join(<231853..232040,232130..232392,232484..>232881))	Acanthamoeba castellanii str. Neff	14918365
ACA1_058030	mRNA	ACA1_058030	NW_004457442.1	233689	234621	D	ACA1_058030	join(<233689..233754,233829..233912,234011..234102,234184..234244,234353..234454,234550..>234621)	Acanthamoeba castellanii str. Neff	14918366
ACA1_058040	mRNA	ACA1_058040	NW_004457442.1	235120	235740	R	ACA1_058040	complement(<235120..>235740)	Acanthamoeba castellanii str. Neff	14918426
ACA1_058050	mRNA	ACA1_058050	NW_004457442.1	236094	240011	R	ACA1_058050	complement(join(<236094..236419,236506..236650,236757..236904,236974..237137,237176..237282,237339..237458,237532..237676,237765..237837,237908..238001,238090..238261,238435..238565,238632..238796,238871..239330,239426..239546,239653..>240011))	Acanthamoeba castellanii str. Neff	14918427
ACA1_058060	mRNA	ACA1_058060	NW_004457442.1	240687	243848	R	ACA1_058060	complement(join(<240687..240997,241104..241287,241360..242004,242114..242233,242319..242445,242521..242572,242710..242881,242960..243058,243196..243276,243368..243435,243528..243594,243708..>243848))	Acanthamoeba castellanii str. Neff	14918428
ACA1_058070	mRNA	ACA1_058070	NW_004457442.1	244163	246469	R	ACA1_058070	complement(join(<244163..244503,244667..244747,244843..244974,245070..245226,245303..245423,245482..245569,245659..245735,245797..245866,245945..246077,246140..246234,246352..>246469))	Acanthamoeba castellanii str. Neff	14918429
ACA1_058080	mRNA	ACA1_058080	NW_004457442.1	246856	248653	R	ACA1_058080	complement(join(<246856..246905,246974..247797,247872..248020,248079..248161,248395..248479,248558..>248653))	Acanthamoeba castellanii str. Neff	14918430
ACA1_058090	mRNA	ACA1_058090	NW_004457442.1	249129	250312	D	ACA1_058090	join(<249129..249368,249465..249579,249649..249840,249906..>250312)	Acanthamoeba castellanii str. Neff	14918431
ACA1_058100	mRNA	ACA1_058100	NW_004457442.1	250722	254372	D	ACA1_058100	join(<250722..251042,251103..251233,251254..251566,251637..251709,251773..251919,251987..252193,252263..252498,252590..252785,252883..>254372)	Acanthamoeba castellanii str. Neff	14918432
ACA1_058110	mRNA	ACA1_058110	NW_004457442.1	254701	255321	D	ACA1_058110	<254701..>255321	Acanthamoeba castellanii str. Neff	14918433
ACA1_058120	mRNA	ACA1_058120	NW_004457442.1	255536	257686	R	ACA1_058120	complement(<255536..>257686)	Acanthamoeba castellanii str. Neff	14918434
ACA1_058130	mRNA	ACA1_058130	NW_004457442.1	257868	258293	R	ACA1_058130	complement(join(<257868..258121,258179..>258293))	Acanthamoeba castellanii str. Neff	14918435
ACA1_058140	mRNA	ACA1_058140	NW_004457442.1	258395	259842	D	ACA1_058140	join(<258395..258784,258864..258902,258999..259084,259174..259429,259573..>259842)	Acanthamoeba castellanii str. Neff	14918436
ACA1_058150	mRNA	ACA1_058150	NW_004457442.1	260169	261203	D	ACA1_058150	join(<260169..260337,260402..260541,260607..260735,260808..260886,260992..>261203)	Acanthamoeba castellanii str. Neff	14918437
ACA1_058160	mRNA	ACA1_058160	NW_004457442.1	261395	261808	R	ACA1_058160	complement(join(<261395..261682,261782..>261808))	Acanthamoeba castellanii str. Neff	14918438
ACA1_058170	mRNA	ACA1_058170	NW_004457442.1	262517	264265	D	ACA1_058170	join(<262517..263284,263367..263487,263572..263676,263775..264120,264193..>264265)	Acanthamoeba castellanii str. Neff	14918439
ACA1_058180	mRNA	ACA1_058180	NW_004457442.1	264374	265635	R	ACA1_058180	complement(join(<264374..264529,264608..264791,264879..265263,265413..>265635))	Acanthamoeba castellanii str. Neff	14918440
ACA1_058190	mRNA	ACA1_058190	NW_004457442.1	265912	268761	R	ACA1_058190	complement(join(<265912..265989,266096..266863,267098..267325,267388..267478,267556..267680,267763..>268761))	Acanthamoeba castellanii str. Neff	14918441
ACA1_058200	mRNA	ACA1_058200	NW_004457442.1	268990	270397	D	ACA1_058200	join(<268990..269131,269224..269298,269386..269493,269513..269656,269743..269816,269882..269984,270083..270209,270313..>270397)	Acanthamoeba castellanii str. Neff	14918442
ACA1_058210	mRNA	ACA1_058210	NW_004457442.1	270441	272946	R	ACA1_058210	complement(join(<270441..270454,270550..270675,270764..270905,270978..271053,271187..271347,271433..271567,271665..271821,272016..272088,272217..272304,272397..272459,272764..>272946))	Acanthamoeba castellanii str. Neff	14918443
ACA1_058220	mRNA	ACA1_058220	NW_004457442.1	273136	274409	D	ACA1_058220	join(<273136..273140,273231..273589,273652..>274409)	Acanthamoeba castellanii str. Neff	14918444
ACA1_058230	mRNA	ACA1_058230	NW_004457442.1	274547	276858	R	ACA1_058230	complement(join(<274547..274646,274725..274817,274918..276272,276401..276480,276560..276695,276766..>276858))	Acanthamoeba castellanii str. Neff	14918445
ACA1_058240	mRNA	ACA1_058240	NW_004457442.1	277218	281629	D	ACA1_058240	join(<277218..277288,277359..277494,277577..277728,277795..278001,278070..278202,278273..278452,278565..279165,279264..279322,279396..279511,279609..279700,279846..279971,280062..280180,280290..280362,280466..280661,280748..280891,280958..281057,281156..>281629)	Acanthamoeba castellanii str. Neff	14918446
ACA1_058250	mRNA	ACA1_058250	NW_004457442.1	282277	282865	D	ACA1_058250	join(<282277..282602,282664..>282865)	Acanthamoeba castellanii str. Neff	14918447
ACA1_058260	mRNA	ACA1_058260	NW_004457442.1	282985	284461	R	ACA1_058260	complement(join(<282985..283325,283431..283550,283674..283696,283812..>284461))	Acanthamoeba castellanii str. Neff	14918514
ACA1_058270	mRNA	ACA1_058270	NW_004457442.1	285301	286215	D	ACA1_058270	join(<285301..285351,285419..285579,285658..285779,285853..285900,285984..286099,286165..>286215)	Acanthamoeba castellanii str. Neff	14918515
ACA1_058280	mRNA	ACA1_058280	NW_004457442.1	286439	288586	R	ACA1_058280	complement(join(<286439..286913,287041..287200,287293..287420,287555..287616,287767..287856,287987..288078,288232..>288586))	Acanthamoeba castellanii str. Neff	14918516
ACA1_058290	mRNA	ACA1_058290	NW_004457442.1	288778	290464	D	ACA1_058290	join(<288778..289066,289182..289805,289893..>290464)	Acanthamoeba castellanii str. Neff	14918517
ACA1_058300	mRNA	ACA1_058300	NW_004457442.1	290928	297418	D	ACA1_058300	join(<290928..291693,291832..292124,292212..292257,292387..293154,293258..293296,293388..293563,293707..294463,294636..294773,294887..295008,295143..295229,295291..295356,295476..295583,295713..295820,295906..296064,296157..296219,296328..296463,296687..296820,297113..>297418)	Acanthamoeba castellanii str. Neff	14918518
ACA1_058310	mRNA	ACA1_058310	NW_004457442.1	297675	298598	D	ACA1_058310	join(<297675..297875,297918..>298598)	Acanthamoeba castellanii str. Neff	14918519
ACA1_058320	mRNA	ACA1_058320	NW_004457442.1	298820	300166	D	ACA1_058320	join(<298820..298949,299102..299236,299333..299449,299535..299688,299760..299907,299987..>300166)	Acanthamoeba castellanii str. Neff	14918520
ACA1_058330	mRNA	ACA1_058330	NW_004457442.1	300575	301054	D	ACA1_058330	join(<300575..300666,300724..>301054)	Acanthamoeba castellanii str. Neff	14918521
ACA1_058340	mRNA	ACA1_058340	NW_004457442.1	301433	303755	R	ACA1_058340	complement(join(<301433..301857,301929..302056,302126..302265,302293..302382,302484..302546,302630..302737,302844..302929,303017..303138,303227..303384,303458..303574,303636..>303755))	Acanthamoeba castellanii str. Neff	14918522
ACA1_058350	mRNA	ACA1_058350	NW_004457442.1	303862	308893	D	ACA1_058350	join(<303862..304179,304285..304395,304503..304644,304741..304840,304935..305049,305145..305266,305350..305750,305817..305942,306145..306257,306354..306456,306531..307069,307131..307188,307275..307459,307490..307501,307578..307706,307781..308185,308282..308401,308478..308774,308843..>308893)	Acanthamoeba castellanii str. Neff	14918523
ACA1_058360	mRNA	ACA1_058360	NW_004457442.1	309167	310778	R	ACA1_058360	complement(join(<309167..310188,310293..310395,310467..310743,310771..>310778))	Acanthamoeba castellanii str. Neff	14918524
ACA1_058370	mRNA	ACA1_058370	NW_004457442.1	312090	315472	D	ACA1_058370	join(<312090..312183,312308..312504,312600..312940,313014..313445,313555..313734,313831..313883,313985..314261,314349..314424,314510..315308,315393..>315472)	Acanthamoeba castellanii str. Neff	14918525
ACA1_058380	mRNA	ACA1_058380	NW_004457442.1	315838	316588	D	ACA1_058380	join(<315838..315920,315994..316195,316283..>316588)	Acanthamoeba castellanii str. Neff	14918526
ACA1_058390	mRNA	ACA1_058390	NW_004457442.1	316740	317467	R	ACA1_058390	complement(join(<316740..316938,317066..317085,317153..>317467))	Acanthamoeba castellanii str. Neff	14918527
ACA1_058400	mRNA	ACA1_058400	NW_004457442.1	317673	318401	R	ACA1_058400	complement(join(<317673..317978,318066..318240,318310..>318401))	Acanthamoeba castellanii str. Neff	14918528
ACA1_058410	mRNA	ACA1_058410	NW_004457442.1	318734	319454	R	ACA1_058410	complement(join(<318734..319039,319113..319329,319360..>319454))	Acanthamoeba castellanii str. Neff	14918529
ACA1_058420	mRNA	ACA1_058420	NW_004457442.1	319719	322122	D	ACA1_058420	join(<319719..319796,319894..320010,320109..320177,320310..320465,320549..320641,320743..320903,321045..321189,321314..321418,321484..321764,321858..>322122)	Acanthamoeba castellanii str. Neff	14918530
ACA1_058430	mRNA	ACA1_058430	NW_004457442.1	322236	322784	R	ACA1_058430	complement(join(<322236..322529,322623..>322784))	Acanthamoeba castellanii str. Neff	14918531
ACA1_058440	mRNA	ACA1_058440	NW_004457442.1	323330	324933	R	ACA1_058440	complement(join(<323330..323672,323820..323909,323988..324072,324091..324178,324253..324343,324460..324590,324811..>324933))	Acanthamoeba castellanii str. Neff	14918532
ACA1_058450	mRNA	ACA1_058450	NW_004457442.1	325147	327111	R	ACA1_058450	complement(join(<325147..325333,325413..325569,325725..325889,325966..326067,326189..326375,326479..326717,326829..>327111))	Acanthamoeba castellanii str. Neff	14918533
ACA1_058460	mRNA	ACA1_058460	NW_004457442.1	327499	328016	D	ACA1_058460	join(<327499..327673,327925..>328016)	Acanthamoeba castellanii str. Neff	14918534
ACA1_058470	mRNA	ACA1_058470	NW_004457442.1	328708	329488	D	ACA1_058470	join(<328708..328764,328825..329004,329064..329084,329136..329189,329225..>329488)	Acanthamoeba castellanii str. Neff	14918069
ACA1_058480	mRNA	ACA1_058480	NW_004457442.1	330542	330829	D	ACA1_058480	<330542..>330829	Acanthamoeba castellanii str. Neff	14918070
ACA1_058490	mRNA	ACA1_058490	NW_004457442.1	332039	333685	D	ACA1_058490	join(<332039..332395,332761..332934,333011..333089,333240..333382,333458..>333685)	Acanthamoeba castellanii str. Neff	14918071
ACA1_058500	mRNA	ACA1_058500	NW_004457442.1	334054	335699	R	ACA1_058500	complement(join(<334054..334235,334350..334755,334855..335174,335516..>335699))	Acanthamoeba castellanii str. Neff	14918072
ACA1_058510	mRNA	ACA1_058510	NW_004457442.1	336428	338198	D	ACA1_058510	join(<336428..336493,336598..337662,337808..337979,338065..>338198)	Acanthamoeba castellanii str. Neff	14918073
ACA1_058520	mRNA	ACA1_058520	NW_004457442.1	338934	342273	R	ACA1_058520	complement(join(<338934..339096,339215..339616,339690..339837,340011..340111,340257..340324,340425..340534,340646..340828,340960..341038,341136..341200,341278..341932,342190..>342273))	Acanthamoeba castellanii str. Neff	14918074
ACA1_058530	mRNA	ACA1_058530	NW_004457442.1	343370	346552	D	ACA1_058530	join(<343370..343909,344007..344047,344069..344153,344181..344287,344404..344621,344741..344834,344965..345095,345240..345371,345479..345630,345779..345914,346013..346122,346229..>346552)	Acanthamoeba castellanii str. Neff	14918075
ACA1_058540	mRNA	ACA1_058540	NW_004457442.1	346743	347593	R	ACA1_058540	complement(join(<346743..346865,346955..>347593))	Acanthamoeba castellanii str. Neff	14918076
ACA1_058550	mRNA	ACA1_058550	NW_004457442.1	347847	349933	R	ACA1_058550	complement(join(<347847..347946,348042..348189,348272..348428,348520..348571,348665..348784,348885..>349933))	Acanthamoeba castellanii str. Neff	14918077
ACA1_058560	mRNA	ACA1_058560	NW_004457442.1	350192	352890	R	ACA1_058560	complement(join(<350192..350338,350440..350556,350643..350749,350824..351030,351139..351267,351415..351561,351654..352409,352607..352717,352836..>352890))	Acanthamoeba castellanii str. Neff	14918078
ACA1_058570	mRNA	ACA1_058570	NW_004457442.1	353806	355615	R	ACA1_058570	complement(join(<353806..354646,354782..354884,355065..355162,355260..>355615))	Acanthamoeba castellanii str. Neff	14918079
ACA1_058580	mRNA	ACA1_058580	NW_004457442.1	355982	356278	D	ACA1_058580	<355982..>356278	Acanthamoeba castellanii str. Neff	14918080
ACA1_058590	mRNA	ACA1_058590	NW_004457442.1	356560	359711	D	ACA1_058590	join(<356560..356627,356785..356895,357023..357084,357172..357319,357422..357508,357590..357646,357715..357797,357898..358025,358149..358282,358353..358548,358628..358705,358819..358908,358994..359144,359289..359462,359566..>359711)	Acanthamoeba castellanii str. Neff	14918081
ACA1_058700	mRNA	ACA1_058700	NW_004457442.1	360285	361720	D	ACA1_058700	join(<360285..360866,360938..361132,361213..361472,361555..>361720)	Acanthamoeba castellanii str. Neff	14918082
ACA1_058710	mRNA	ACA1_058710	NW_004457442.1	362101	362696	R	ACA1_058710	complement(join(<362101..362421,362538..>362696))	Acanthamoeba castellanii str. Neff	14918083
ACA1_058720	mRNA	ACA1_058720	NW_004457442.1	363092	364136	R	ACA1_058720	complement(join(<363092..363174,363270..363360,363455..363582,363682..363804,363920..>364136))	Acanthamoeba castellanii str. Neff	14918084
ACA1_058730	mRNA	ACA1_058730	NW_004457442.1	364339	365839	D	ACA1_058730	join(<364339..364504,364608..364743,364772..364990,365112..365236,365324..365373,365460..365546,365627..>365839)	Acanthamoeba castellanii str. Neff	14918085
ACA1_058740	mRNA	ACA1_058740	NW_004457442.1	366518	371499	D	ACA1_058740	join(<366518..366811,366916..367089,367175..367351,367438..367827,367904..368089,368387..368490,368572..369433,369501..369845,370129..370384,370614..370761,370851..370936,371036..371226,371320..>371499)	Acanthamoeba castellanii str. Neff	14918086
ACA1_058750	mRNA	ACA1_058750	NW_004457442.1	372453	376310	D	ACA1_058750	join(<372453..372572,372652..372843,372927..373036,373139..373261,373385..373479,373623..373719,373810..373913,373975..374167,374311..374465,374569..374668,374753..374836,374960..375053,375187..375302,375620..375803,375904..376008,376092..>376310)	Acanthamoeba castellanii str. Neff	14918087
ACA1_058760	mRNA	ACA1_058760	NW_004457442.1	376550	377632	D	ACA1_058760	<376550..>377632	Acanthamoeba castellanii str. Neff	14918088
ACA1_058770	mRNA	ACA1_058770	NW_004457442.1	377911	378716	R	ACA1_058770	complement(join(<377911..378156,378238..378529,378563..378602,378713..>378716))	Acanthamoeba castellanii str. Neff	14918089
ACA1_058780	mRNA	ACA1_058780	NW_004457442.1	378893	381427	R	ACA1_058780	complement(join(<378893..379043,379173..379297,379405..379516,379610..379683,379756..379848,379933..380021,380128..380194,380268..380397,380453..380565,380662..380732,380814..380921,381008..381108,381219..>381427))	Acanthamoeba castellanii str. Neff	14918090
ACA1_058790	mRNA	ACA1_058790	NW_004457442.1	381694	383451	R	ACA1_058790	complement(join(<381694..381877,381976..382120,382224..382495,382578..382643,382710..382818,382884..383108,383202..>383451))	Acanthamoeba castellanii str. Neff	14918091
ACA1_058800	mRNA	ACA1_058800	NW_004457442.1	383725	384980	D	ACA1_058800	join(<383725..383806,383872..383998,384191..384833,384948..>384980)	Acanthamoeba castellanii str. Neff	14918321
ACA1_058810	mRNA	ACA1_058810	NW_004457442.1	385471	387036	D	ACA1_058810	<385471..>387036	Acanthamoeba castellanii str. Neff	14918322
ACA1_058820	mRNA	ACA1_058820	NW_004457442.1	388253	389619	D	ACA1_058820	join(<388253..388276,388370..388451,388545..388656,389037..389262,389392..>389619)	Acanthamoeba castellanii str. Neff	14918323
ACA1_058830	mRNA	ACA1_058830	NW_004457442.1	389781	390949	R	ACA1_058830	complement(join(<389781..390005,390272..390346,390459..390536,390595..390643,390713..390794,390877..>390949))	Acanthamoeba castellanii str. Neff	14918324
ACA1_058840	mRNA	ACA1_058840	NW_004457442.1	391235	394044	R	ACA1_058840	complement(join(<391235..392263,392345..392653,392746..393402,393493..393824,393975..>394044))	Acanthamoeba castellanii str. Neff	14918325
ACA1_058850	mRNA	ACA1_058850	NW_004457442.1	394434	396684	R	ACA1_058850	complement(join(<394434..395667,395788..396465,396587..>396684))	Acanthamoeba castellanii str. Neff	14918326
ACA1_058860	mRNA	ACA1_058860	NW_004457442.1	397035	398200	R	ACA1_058860	complement(join(<397035..397187,397294..397495,397621..397784,397913..>398200))	Acanthamoeba castellanii str. Neff	14918327
ACA1_058880	mRNA	ACA1_058880	NW_004457442.1	400787	401702	D	ACA1_058880	join(<400787..400922,400993..401073,401135..401182,401293..>401702)	Acanthamoeba castellanii str. Neff	14918329
ACA1_058890	mRNA	ACA1_058890	NW_004457442.1	401868	404141	R	ACA1_058890	complement(join(<401868..402219,402317..402428,402537..402669,402736..403131,403319..403907,404041..>404141))	Acanthamoeba castellanii str. Neff	14918330
ACA1_058900	mRNA	ACA1_058900	NW_004457442.1	405673	407788	R	ACA1_058900	complement(join(<405673..405849,405964..406187,406267..406516,406580..406689,406954..>407788))	Acanthamoeba castellanii str. Neff	14918331
ACA1_058910	mRNA	ACA1_058910	NW_004457442.1	408375	409501	D	ACA1_058910	join(<408375..408402,408484..408942,409010..409184,409300..>409501)	Acanthamoeba castellanii str. Neff	14918332
ACA1_058920	mRNA	ACA1_058920	NW_004457442.1	409675	411142	R	ACA1_058920	complement(join(<409675..409897,410024..410597,410697..410847,410942..>411142))	Acanthamoeba castellanii str. Neff	14918333
ACA1_058930	mRNA	ACA1_058930	NW_004457442.1	411283	412483	R	ACA1_058930	complement(join(<411283..411493,411576..411687,411769..412233,412342..>412483))	Acanthamoeba castellanii str. Neff	14918334
ACA1_058940	mRNA	ACA1_058940	NW_004457442.1	412843	415664	R	ACA1_058940	complement(join(<412843..412941,413019..413180,413313..413474,413612..413892,414030..414170,414283..414390,415079..415161,415332..415396,415653..>415664))	Acanthamoeba castellanii str. Neff	14918335
ACA1_059050	mRNA	ACA1_059050	NW_004457442.1	419665	421514	R	ACA1_059050	complement(join(<419665..420177,421020..>421514))	Acanthamoeba castellanii str. Neff	14918336
ACA1_059160	mRNA	ACA1_059160	NW_004457442.1	423402	423869	R	ACA1_059160	complement(join(<423402..423663,423793..>423869))	Acanthamoeba castellanii str. Neff	14918337
ACA1_059170	mRNA	ACA1_059170	NW_004457442.1	427097	428605	R	ACA1_059170	complement(join(<427097..427239,427362..427517,427579..427954,428125..428252,428314..>428605))	Acanthamoeba castellanii str. Neff	14918338
ACA1_059280	mRNA	ACA1_059280	NW_004457442.1	431901	432230	D	ACA1_059280	join(<431901..432068,432150..>432230)	Acanthamoeba castellanii str. Neff	14918339
ACA1_059290	mRNA	ACA1_059290	NW_004457442.1	435932	438208	D	ACA1_059290	<435932..>438208	Acanthamoeba castellanii str. Neff	14918340
ACA1_059300	mRNA	ACA1_059300	NW_004457442.1	438337	439678	R	ACA1_059300	complement(join(<438337..438447,438556..438694,438816..438973,439095..439253,439380..439534,439618..>439678))	Acanthamoeba castellanii str. Neff	14918341
ACA1_059310	mRNA	ACA1_059310	NW_004457442.1	439820	442164	R	ACA1_059310	complement(join(<439820..439843,440173..>442164))	Acanthamoeba castellanii str. Neff	14918342
ACA1_059420	mRNA	ACA1_059420	NW_004457442.1	442317	444608	R	ACA1_059420	complement(<442317..>444608)	Acanthamoeba castellanii str. Neff	14918343
ACA1_059430	mRNA	ACA1_059430	NW_004457442.1	444829	446332	R	ACA1_059430	complement(join(<444829..445899,445992..446052,446214..>446332))	Acanthamoeba castellanii str. Neff	14918344
ACA1_059440	mRNA	ACA1_059440	NW_004457442.1	446607	448187	R	ACA1_059440	complement(join(<446607..446708,446870..447520,447589..447903,447984..>448187))	Acanthamoeba castellanii str. Neff	14918345
ACA1_059450	mRNA	ACA1_059450	NW_004457442.1	448310	449997	D	ACA1_059450	join(<448310..448603,448758..448869,449216..449349,449455..449699,449775..449818,449921..>449997)	Acanthamoeba castellanii str. Neff	14917834
ACA1_059460	mRNA	ACA1_059460	NW_004457442.1	450241	450990	D	ACA1_059460	join(<450241..450483,450589..>450990)	Acanthamoeba castellanii str. Neff	14917835
ACA1_059470	mRNA	ACA1_059470	NW_004457442.1	451305	452583	D	ACA1_059470	join(<451305..451470,451533..451576,451645..451721,451784..451928,452026..452241,452330..452409,452517..>452583)	Acanthamoeba castellanii str. Neff	14917836
ACA1_059480	mRNA	ACA1_059480	NW_004457442.1	452968	453705	D	ACA1_059480	join(<452968..453066,453169..453266,453345..453454,453548..>453705)	Acanthamoeba castellanii str. Neff	14917837
ACA1_059490	mRNA	ACA1_059490	NW_004457442.1	454046	455056	D	ACA1_059490	join(<454046..454156,454267..454329,454365..454425,454503..454613,454704..454898,454977..>455056)	Acanthamoeba castellanii str. Neff	14917838
ACA1_059500	mRNA	ACA1_059500	NW_004457442.1	455387	457747	D	ACA1_059500	<455387..>457747	Acanthamoeba castellanii str. Neff	14917839
ACA1_059510	mRNA	ACA1_059510	NW_004457442.1	457869	459047	R	ACA1_059510	complement(join(<457869..458082,458164..458311,458462..458627,458788..458867,458960..>459047))	Acanthamoeba castellanii str. Neff	14917840
ACA1_059520	mRNA	ACA1_059520	NW_004457442.1	459347	461511	R	ACA1_059520	complement(join(<459347..459733,459857..460033,460136..460303,460377..460562,460632..460906,460997..461107,461240..461355,461450..>461511))	Acanthamoeba castellanii str. Neff	14917841
ACA1_059530	mRNA	ACA1_059530	NW_004457442.1	461633	462389	R	ACA1_059530	complement(join(<461633..461764,461852..461942,462118..462217,462293..>462389))	Acanthamoeba castellanii str. Neff	14917842
ACA1_059540	mRNA	ACA1_059540	NW_004457442.1	462844	464896	D	ACA1_059540	join(<462844..462871,463012..463310,463421..463534,463650..463983,464052..464353,464439..464691,464769..>464896)	Acanthamoeba castellanii str. Neff	14917843
ACA1_059550	mRNA	ACA1_059550	NW_004457442.1	465077	465940	D	ACA1_059550	join(<465077..465576,465778..>465940)	Acanthamoeba castellanii str. Neff	14917844
ACA1_059560	mRNA	ACA1_059560	NW_004457442.1	466741	467508	D	ACA1_059560	<466741..>467508	Acanthamoeba castellanii str. Neff	14917845
ACA1_059570	mRNA	ACA1_059570	NW_004457442.1	467851	474877	D	ACA1_059570	join(<467851..468017,468101..468488,468603..468774,468886..469116,469226..469403,469562..470256,470522..470623,470758..470994,471063..471248,471391..472005,472086..472276,472375..472770,472910..473217,473301..473518,473601..473738,473816..474150,474227..>474877)	Acanthamoeba castellanii str. Neff	14917846
ACA1_059580	mRNA	ACA1_059580	NW_004457442.1	474958	480579	D	ACA1_059580	join(<474958..474969,475138..475663,475784..476781,476889..477046,477132..478965,479058..479329,479379..>480579)	Acanthamoeba castellanii str. Neff	14917847
ACA1_059590	mRNA	ACA1_059590	NW_004457442.1	480974	493514	R	ACA1_059590	complement(join(<480974..482177,482287..482537,482641..483006,483088..483945,484048..484402,484521..484612,484720..485717,485843..486929,487006..487340,487418..487555,487656..487873,487966..488273,488525..488932,489011..489201,489331..489984,490052..490237,490330..490566,490687..490741,490754..490903,490968..491733,491888..492065,492164..492394,492544..492715,492844..493231,493348..>493514))	Acanthamoeba castellanii str. Neff	14917848
ACA1_059600	mRNA	ACA1_059600	NW_004457442.1	494398	496711	D	ACA1_059600	join(<494398..494473,494582..494705,494799..494908,495131..496362,496373..>496711)	Acanthamoeba castellanii str. Neff	14917849
ACA1_059610	mRNA	ACA1_059610	NW_004457442.1	496773	499665	R	ACA1_059610	complement(join(<496773..497332,497455..497538,497619..497707,497849..498079,498173..498254,498328..498451,498563..498679,498789..499114,499200..499390,499472..>499665))	Acanthamoeba castellanii str. Neff	14917850
ACA1_059620	mRNA	ACA1_059620	NW_004457442.1	499867	500130	D	ACA1_059620	<499867..>500130	Acanthamoeba castellanii str. Neff	14917851
ACA1_059730	mRNA	ACA1_059730	NW_004457442.1	503403	503567	R	ACA1_059730	complement(<503403..>503567)	Acanthamoeba castellanii str. Neff	14917852
ACA1_059740	mRNA	ACA1_059740	NW_004457442.1	504053	506223	R	ACA1_059740	complement(join(<504053..504898,504985..505149,505265..505436,505528..505712,505822..506079,506209..>506223))	Acanthamoeba castellanii str. Neff	14917853
ACA1_059750	mRNA	ACA1_059750	NW_004457442.1	506408	509497	D	ACA1_059750	join(<506408..506532,506727..506790,507063..507135,507199..507377,507505..507582,507662..507728,507846..507898,507974..508016,508124..508205,508305..508353,508486..508553,508671..508757,508857..508941,509048..509194,509312..509412,509464..>509497)	Acanthamoeba castellanii str. Neff	14917854
ACA1_059760	mRNA	ACA1_059760	NW_004457442.1	510568	512424	D	ACA1_059760	join(<510568..510977,511140..511293,511471..>512424)	Acanthamoeba castellanii str. Neff	14917855
ACA1_059770	mRNA	ACA1_059770	NW_004457442.1	512556	515553	R	ACA1_059770	complement(join(<512556..512783,512875..512985,513085..513252,513332..513433,513577..513687,513780..513992,514160..514441,514629..514727,514836..514886,514960..515042,515144..515195,515276..515411,515486..>515553))	Acanthamoeba castellanii str. Neff	14917856
ACA1_059780	mRNA	ACA1_059780	NW_004457442.1	515645	516333	R	ACA1_059780	complement(join(<515645..515661,515675..516117,516257..>516333))	Acanthamoeba castellanii str. Neff	14917857
ACA1_059790	mRNA	ACA1_059790	NW_004457442.1	516511	517669	R	ACA1_059790	complement(join(<516511..516678,516970..517095,517316..517351,517380..517507,517552..>517669))	Acanthamoeba castellanii str. Neff	14917858
ACA1_059800	mRNA	ACA1_059800	NW_004457442.1	517765	520272	D	ACA1_059800	join(<517765..517816,517977..518071,518202..518287,518419..518545,518637..518778,518859..519130,519227..519294,519427..519500,519595..519648,519882..519938,520015..520056,520138..520220,520237..>520272)	Acanthamoeba castellanii str. Neff	14917859
ACA1_059810	mRNA	ACA1_059810	NW_004457442.1	520591	523204	D	ACA1_059810	join(<520591..521830,522075..522170,522262..522840,522981..>523204)	Acanthamoeba castellanii str. Neff	14917860
ACA1_059820	mRNA	ACA1_059820	NW_004457442.1	523434	528883	D	ACA1_059820	join(<523434..523530,523620..523696,523771..523812,523904..524000,524099..524217,524335..524450,524553..524709,524844..524926,525019..525099,525193..525333,525389..525444,525558..525648,525768..525870,525965..526057,526223..526409,526497..526666,526803..526913,526994..527167,527271..527435,527578..527673,527785..527980,528048..528119,528203..528390,528487..528651,528758..>528883)	Acanthamoeba castellanii str. Neff	14917861
ACA1_059830	mRNA	ACA1_059830	NW_004457442.1	529077	533522	R	ACA1_059830	complement(join(<529077..529154,529318..529394,529545..529701,529805..529977,530266..530338,530444..530631,530739..531900,532016..532154,532269..532396,532513..532652,532788..532975,533089..>533522))	Acanthamoeba castellanii str. Neff	14917862
ACA1_059840	mRNA	ACA1_059840	NW_004457442.1	534186	538882	D	ACA1_059840	join(<534186..534329,534471..534565,534678..534874,534959..535047,535166..535249,535404..535500,535561..535710,535821..535899,535993..536200,536295..536539,536676..536739,536866..536935,537012..537074,537168..537347,537446..537795,537893..538197,538348..538465,538584..538679,538766..>538882)	Acanthamoeba castellanii str. Neff	14917863
ACA1_059850	mRNA	ACA1_059850	NW_004457442.1	539145	540595	R	ACA1_059850	complement(join(<539145..539236,539316..539367,539570..539689,539812..539931,540095..>540595))	Acanthamoeba castellanii str. Neff	14917864
ACA1_059860	mRNA	ACA1_059860	NW_004457442.1	540881	545039	D	ACA1_059860	join(<540881..542167,542251..542511,542663..542774,542847..543036,543132..543214,543304..543774,543858..543934,544012..544344,544423..544608,544671..>545039)	Acanthamoeba castellanii str. Neff	14917865
ACA1_059870	mRNA	ACA1_059870	NW_004457442.1	545801	551340	D	ACA1_059870	join(<545801..545830,546147..546368,546505..546709,546794..546851,547010..547140,547314..547378,547723..547900,548013..548153,548300..548461,548563..548698,548828..548980,549178..549257,549388..549506,549698..549784,549963..550076,550211..550324,550440..550591,550690..550765,550868..550982,551117..>551340)	Acanthamoeba castellanii str. Neff	14917866
ACA1_059980	mRNA	ACA1_059980	NW_004457442.1	552000	556517	R	ACA1_059980	complement(join(<552000..552285,552367..552511,552685..552795,552973..553363,553483..553625,553699..553884,554009..554117,554288..554353,554508..554600,554712..554846,555003..555174,555313..555361,555449..555494,555573..555709,555804..556070,556166..>556517))	Acanthamoeba castellanii str. Neff	14917867
ACA1_059990	mRNA	ACA1_059990	NW_004457442.1	557004	558941	D	ACA1_059990	join(<557004..557081,557190..557337,557541..557665,557747..557812,557924..557972,558116..558208,558329..558436,558528..558645,558707..558807,558895..>558941)	Acanthamoeba castellanii str. Neff	14917868
ACA1_060000	mRNA	ACA1_060000	NW_004457442.1	559239	560156	R	ACA1_060000	complement(<559239..>560156)	Acanthamoeba castellanii str. Neff	14917869
ACA1_060010	mRNA	ACA1_060010	NW_004457442.1	560468	561790	D	ACA1_060010	join(<560468..560741,560916..560976,561083..561185,561319..561411,561525..561656,561743..>561790)	Acanthamoeba castellanii str. Neff	14917870
ACA1_060020	mRNA	ACA1_060020	NW_004457442.1	561900	563699	R	ACA1_060020	complement(join(<561900..562028,562106..562214,562327..562435,562522..562589,562698..562796,562908..562984,563115..563220,563306..563426,563609..>563699))	Acanthamoeba castellanii str. Neff	14917871
ACA1_060030	mRNA	ACA1_060030	NW_004457442.1	563878	566418	D	ACA1_060030	join(<563878..564020,564117..564176,564320..564418,564556..564639,564746..564848,564967..565355,565409..565520,565643..565711,565806..565889,565972..566055,566125..>566418)	Acanthamoeba castellanii str. Neff	14917872
ACA1_060040	mRNA	ACA1_060040	NW_004457442.1	566821	571332	D	ACA1_060040	join(<566821..566971,567173..567303,567556..567641,567726..567771,567876..567942,568017..568137,568218..568413,568505..568661,568742..568883,568991..569046,569119..569337,569399..569610,569688..569831,569934..570175,570287..570560,570638..571096,571177..>571332)	Acanthamoeba castellanii str. Neff	14917873
ACA1_060050	mRNA	ACA1_060050	NW_004457442.1	571477	572469	R	ACA1_060050	complement(join(<571477..571719,571835..571912,572083..>572469))	Acanthamoeba castellanii str. Neff	14918367
ACA1_060060	mRNA	ACA1_060060	NW_004457442.1	574495	575145	R	ACA1_060060	complement(<574495..>575145)	Acanthamoeba castellanii str. Neff	14918368
ACA1_060070	mRNA	ACA1_060070	NW_004457442.1	575267	576073	R	ACA1_060070	complement(join(<575267..575770,575810..>576073))	Acanthamoeba castellanii str. Neff	14918369
ACA1_060080	mRNA	ACA1_060080	NW_004457442.1	576871	577972	R	ACA1_060080	complement(join(<576871..577482,577522..577579,577605..>577972))	Acanthamoeba castellanii str. Neff	14918370
ACA1_060090	mRNA	ACA1_060090	NW_004457442.1	578750	580577	R	ACA1_060090	complement(join(<578750..578775,578886..579024,579197..579430,579505..579653,579847..579856,579954..580118,580206..580241,580374..>580577))	Acanthamoeba castellanii str. Neff	14918371
ACA1_060100	mRNA	ACA1_060100	NW_004457442.1	580794	586054	D	ACA1_060100	join(<580794..580869,580999..581116,581207..581251,581565..581642,581726..581951,582116..582280,582438..582603,582689..583071,583161..583286,583423..583514,583617..583678,583776..583939,584018..584099,584198..584909,585062..585188,585261..585584,585717..585905,586031..>586054)	Acanthamoeba castellanii str. Neff	14918372
ACA1_060110	mRNA	ACA1_060110	NW_004457442.1	586587	588336	D	ACA1_060110	join(<586587..587048,587145..587237,587362..>588336)	Acanthamoeba castellanii str. Neff	14918373
ACA1_060120	mRNA	ACA1_060120	NW_004457442.1	589012	589513	D	ACA1_060120	join(<589012..589070,589168..589250,589324..589412,589487..>589513)	Acanthamoeba castellanii str. Neff	14918374
ACA1_060130	mRNA	ACA1_060130	NW_004457442.1	590074	594386	R	ACA1_060130	complement(join(<590074..590364,590468..590689,590768..590894,591065..591162,591311..591493,591612..591783,591856..592098,592245..592434,592550..592708,592817..592855,593007..593172,593245..593319,593567..593613,593692..593803,593960..594069,594293..>594386))	Acanthamoeba castellanii str. Neff	14918375
ACA1_060140	mRNA	ACA1_060140	NW_004457442.1	594741	596008	D	ACA1_060140	join(<594741..594803,594856..594930,594993..595092,595165..595289,595376..595423,595714..595771,595884..>596008)	Acanthamoeba castellanii str. Neff	14918376
ACA1_060150	mRNA	ACA1_060150	NW_004457442.1	596270	598455	D	ACA1_060150	join(<596270..596620,596813..596937,597106..597276,597372..597453,597558..597657,597753..598052,598159..598247,598327..>598455)	Acanthamoeba castellanii str. Neff	14918377
ACA1_060160	mRNA	ACA1_060160	NW_004457442.1	598528	601861	R	ACA1_060160	complement(join(<598528..599339,599444..599517,599528..599608,599643..599729,599850..599977,600114..600253,600322..600426,600484..>601861))	Acanthamoeba castellanii str. Neff	14918378
ACA1_060170	mRNA	ACA1_060170	NW_004457442.1	602264	606286	R	ACA1_060170	complement(<602264..>606286)	Acanthamoeba castellanii str. Neff	14918379
ACA1_060180	mRNA	ACA1_060180	NW_004457442.1	606297	608055	R	ACA1_060180	complement(join(<606297..606596,606673..606757,606842..606931,607044..607088,607214..607328,607420..607502,607680..607819,607978..>608055))	Acanthamoeba castellanii str. Neff	14918380
ACA1_060190	mRNA	ACA1_060190	NW_004457442.1	608331	609712	D	ACA1_060190	join(<608331..608482,608620..608716,608830..608912,609041..609129,609248..609409,609513..>609712)	Acanthamoeba castellanii str. Neff	14918381
ACA1_060200	mRNA	ACA1_060200	NW_004457442.1	609888	612794	R	ACA1_060200	complement(join(<609888..610100,610234..610379,610523..610711,610881..611051,611152..611251,611370..611459,611648..611991,612098..612384,612496..612625,612713..>612794))	Acanthamoeba castellanii str. Neff	14918382
ACA1_060210	mRNA	ACA1_060210	NW_004457442.1	613157	614502	D	ACA1_060210	join(<613157..613202,613310..613404,613493..613571,613669..613731,613866..614036,614174..>614502)	Acanthamoeba castellanii str. Neff	14918383
ACA1_060220	mRNA	ACA1_060220	NW_004457442.1	614827	621510	D	ACA1_060220	<614827..>621510	Acanthamoeba castellanii str. Neff	14918384
ACA1_060230	mRNA	ACA1_060230	NW_004457442.1	623058	624803	D	ACA1_060230	join(<623058..623180,623354..623477,623572..>624803)	Acanthamoeba castellanii str. Neff	14918385
ACA1_060240	mRNA	ACA1_060240	NW_004457442.1	625182	626300	R	ACA1_060240	complement(join(<625182..626066,626271..>626300))	Acanthamoeba castellanii str. Neff	14918386
ACA1_060250	mRNA	ACA1_060250	NW_004457442.1	626467	628144	R	ACA1_060250	complement(join(<626467..626597,626698..626783,626907..627094,627215..627421,627466..627637,627774..627875,627984..>628144))	Acanthamoeba castellanii str. Neff	14918387
ACA1_060260	mRNA	ACA1_060260	NW_004457442.1	628275	632144	R	ACA1_060260	complement(join(<628275..628708,628852..629318,629449..629560,629753..629919,630164..630262,630401..630467,630639..630721,630884..630975,631323..631492,631609..631685,631897..631986,632074..>632144))	Acanthamoeba castellanii str. Neff	14917874
ACA1_060270	mRNA	ACA1_060270	NW_004457442.1	632354	633735	R	ACA1_060270	complement(join(<632354..632676,632781..632963,633121..633471,633612..>633735))	Acanthamoeba castellanii str. Neff	14917875
ACA1_060280	mRNA	ACA1_060280	NW_004457442.1	633879	634749	R	ACA1_060280	complement(join(<633879..633975,633998..634060,634142..634234,634406..>634749))	Acanthamoeba castellanii str. Neff	14917876
ACA1_060290	mRNA	ACA1_060290	NW_004457442.1	636214	639123	D	ACA1_060290	join(<636214..636716,636870..637045,637261..637444,637566..>639123)	Acanthamoeba castellanii str. Neff	14917877
ACA1_060300	mRNA	ACA1_060300	NW_004457442.1	639392	640901	D	ACA1_060300	join(<639392..639465,639634..639922,640145..640255,640365..640461,640600..>640901)	Acanthamoeba castellanii str. Neff	14917878
ACA1_060310	mRNA	ACA1_060310	NW_004457442.1	640949	642126	D	ACA1_060310	join(<640949..641071,641236..641295,641452..641575,641675..>642126)	Acanthamoeba castellanii str. Neff	14917879
ACA1_060320	mRNA	ACA1_060320	NW_004457442.1	642203	646407	R	ACA1_060320	complement(join(<642203..642347,642417..642551,642689..642760,642850..643487,643503..643559,643586..643621,643636..643744,643949..644018,644132..644267,644418..644484,644618..644734,644840..644941,645146..645224,645400..645472,645620..645729,645931..646008,646197..>646407))	Acanthamoeba castellanii str. Neff	14917880
ACA1_060330	mRNA	ACA1_060330	NW_004457442.1	646519	648900	R	ACA1_060330	complement(join(<646519..646714,646967..647078,647271..647480,647659..647733,647843..648036,648215..648316,648464..>648900))	Acanthamoeba castellanii str. Neff	14917881
ACA1_060340	mRNA	ACA1_060340	NW_004457442.1	649282	649993	D	ACA1_060340	join(<649282..649575,649694..649765,649871..>649993)	Acanthamoeba castellanii str. Neff	14917882
ACA1_060350	mRNA	ACA1_060350	NW_004457442.1	650906	656345	D	ACA1_060350	join(<650906..650935,651105..652059,652263..652327,652498..652614,652713..652797,652955..653703,653854..653961,654068..655346,655478..655558,655702..>656345)	Acanthamoeba castellanii str. Neff	14917883
ACA1_060360	mRNA	ACA1_060360	NW_004457442.1	658687	660305	R	ACA1_060360	complement(join(<658687..658700,658734..658850,658919..658952,659107..659235,659355..659455,659553..659670,659776..659887,660247..>660305))	Acanthamoeba castellanii str. Neff	14917884
ACA1_060370	mRNA	ACA1_060370	NW_004457442.1	661156	662874	R	ACA1_060370	complement(join(<661156..661188,661288..661403,661632..661716,661803..661858,661972..662083,662197..662286,662800..>662874))	Acanthamoeba castellanii str. Neff	14917885
ACA1_060380	mRNA	ACA1_060380	NW_004457442.1	662979	666163	R	ACA1_060380	complement(join(<662979..663121,663325..663405,663482..663689,663818..663950,664034..664444,664564..664618,664776..664872,664956..664993,665246..665424,665538..665803,665879..>666163))	Acanthamoeba castellanii str. Neff	14917886
ACA1_060390	mRNA	ACA1_060390	NW_004457442.1	666247	669328	R	ACA1_060390	complement(join(<666247..666405,666475..666807,666919..666992,667152..667277,667480..667562,667737..667812,667957..668145,668353..668499,668623..668781,668932..669096,669262..>669328))	Acanthamoeba castellanii str. Neff	14917887
ACA1_060400	mRNA	ACA1_060400	NW_004457442.1	669816	672765	D	ACA1_060400	join(<669816..669917,670108..670260,670395..670548,670747..670828,671207..671274,671442..671533,671622..671750,671956..672100,672206..672312,672448..672585,672709..>672765)	Acanthamoeba castellanii str. Neff	14917888
ACA1_060410	mRNA	ACA1_060410	NW_004457442.1	672934	673255	R	ACA1_060410	complement(join(<672934..673059,673148..>673255))	Acanthamoeba castellanii str. Neff	14917889
ACA1_060420	mRNA	ACA1_060420	NW_004457442.1	673551	675405	R	ACA1_060420	complement(join(<673551..673589,673706..673836,674151..674176,674313..674532,674630..674774,674971..>675405))	Acanthamoeba castellanii str. Neff	14917890
ACA1_060430	mRNA	ACA1_060430	NW_004457442.1	679809	680345	D	ACA1_060430	join(<679809..679979,680016..>680345)	Acanthamoeba castellanii str. Neff	14917891
ACA1_060440	mRNA	ACA1_060440	NW_004457442.1	680802	682522	R	ACA1_060440	complement(join(<680802..680837,681120..681276,681435..681554,681783..681924,682034..682086,682209..>682522))	Acanthamoeba castellanii str. Neff	14917892
ACA1_060450	mRNA	ACA1_060450	NW_004457442.1	682737	686597	D	ACA1_060450	join(<682737..682904,683056..683400,683609..683728,683833..683934,684065..684131,684220..684309,684374..684593,684706..684780,684870..685255,685349..685451,685540..685634,685799..685833,685945..686026,686200..>686597)	Acanthamoeba castellanii str. Neff	14917893
ACA1_060460	mRNA	ACA1_060460	NW_004457442.1	686907	688125	D	ACA1_060460	join(<686907..687529,687687..>688125)	Acanthamoeba castellanii str. Neff	14917894
ACA1_060470	mRNA	ACA1_060470	NW_004457442.1	688248	690162	R	ACA1_060470	complement(join(<688248..688667,688805..688939,689104..689247,689343..689563,689691..>690162))	Acanthamoeba castellanii str. Neff	14918018
ACA1_060480	mRNA	ACA1_060480	NW_004457442.1	690431	691843	R	ACA1_060480	complement(join(<690431..690608,690711..690807,690894..690972,691096..691554,691610..>691843))	Acanthamoeba castellanii str. Neff	14918019
ACA1_060490	mRNA	ACA1_060490	NW_004457442.1	691976	694325	R	ACA1_060490	complement(join(<691976..692781,692797..692943,693047..693229,693380..693948,694042..694172,694230..>694325))	Acanthamoeba castellanii str. Neff	14918020
ACA1_060500	mRNA	ACA1_060500	NW_004457442.1	694413	695594	D	ACA1_060500	<694413..>695594	Acanthamoeba castellanii str. Neff	14918021
ACA1_060510	mRNA	ACA1_060510	NW_004457442.1	695979	699653	D	ACA1_060510	join(<695979..696361,696492..696600,696700..696839,696976..697079,697189..697284,697404..697548,697835..698072,698196..698284,698404..698530,698629..698959,699093..699214,699309..699471,699571..>699653)	Acanthamoeba castellanii str. Neff	14918022
ACA1_060520	mRNA	ACA1_060520	NW_004457442.1	699913	701265	R	ACA1_060520	complement(join(<699913..700197,700284..700437,700586..>701265))	Acanthamoeba castellanii str. Neff	14918023
ACA1_060530	mRNA	ACA1_060530	NW_004457442.1	702111	703472	D	ACA1_060530	join(<702111..702275,702351..702515,702622..702702,702839..702952,703113..>703472)	Acanthamoeba castellanii str. Neff	14918024
ACA1_060540	mRNA	ACA1_060540	NW_004457442.1	703635	705436	R	ACA1_060540	complement(join(<703635..704190,704440..704543,704634..705251,705371..>705436))	Acanthamoeba castellanii str. Neff	14918025
ACA1_060550	mRNA	ACA1_060550	NW_004457442.1	706240	707833	D	ACA1_060550	join(<706240..706246,706338..706858,706914..707069,707255..707451,707507..707705,707780..>707833)	Acanthamoeba castellanii str. Neff	14918026
ACA1_060560	mRNA	ACA1_060560	NW_004457442.1	707901	708399	R	ACA1_060560	complement(join(<707901..708180,708272..>708399))	Acanthamoeba castellanii str. Neff	14918027
ACA1_060570	mRNA	ACA1_060570	NW_004457442.1	708810	709507	D	ACA1_060570	join(<708810..708882,708977..709109,709173..709272,709352..>709507)	Acanthamoeba castellanii str. Neff	14918028
ACA1_060580	mRNA	ACA1_060580	NW_004457442.1	709784	710884	R	ACA1_060580	complement(<709784..>710884)	Acanthamoeba castellanii str. Neff	14918029
ACA1_060590	mRNA	ACA1_060590	NW_004457442.1	711176	712152	D	ACA1_060590	join(<711176..711932,712013..>712152)	Acanthamoeba castellanii str. Neff	14918030
ACA1_060600	mRNA	ACA1_060600	NW_004457442.1	712325	712893	R	ACA1_060600	complement(join(<712325..712423,712633..>712893))	Acanthamoeba castellanii str. Neff	14918031
ACA1_060610	mRNA	ACA1_060610	NW_004457442.1	713272	715628	D	ACA1_060610	join(<713272..713288,713361..713455,713524..713735,713813..714082,714302..714518,714615..714779,714875..715255,715315..>715628)	Acanthamoeba castellanii str. Neff	14918032
ACA1_060620	mRNA	ACA1_060620	NW_004457442.1	716310	719206	R	ACA1_060620	complement(join(<716310..716393,716465..716685,716772..717038,717133..717301,717407..717558,717674..717796,717932..718024,718107..718365,718508..718600,718688..>719206))	Acanthamoeba castellanii str. Neff	14918033
ACA1_060630	mRNA	ACA1_060630	NW_004457442.1	719893	721551	R	ACA1_060630	complement(join(<719893..720087,720187..720314,720413..720515,720618..720779,720939..721126,721269..721395,721540..>721551))	Acanthamoeba castellanii str. Neff	14918034
ACA1_060640	mRNA	ACA1_060640	NW_004457442.1	721864	722788	R	ACA1_060640	complement(join(<721864..721969,722094..722203,722292..722381,722455..722638,722724..>722788))	Acanthamoeba castellanii str. Neff	14918035
ACA1_060650	mRNA	ACA1_060650	NW_004457442.1	722970	726856	D	ACA1_060650	join(<722970..723380,723611..724492,724623..724755,724876..724928,725020..725098,725211..725239,725350..725428,725518..725593,725681..725784,726019..726225,726304..726494,726608..>726856)	Acanthamoeba castellanii str. Neff	14918036
ACA1_060660	mRNA	ACA1_060660	NW_004457442.1	727090	728749	D	ACA1_060660	join(<727090..727185,727281..727366,727453..727514,727624..727829,727948..728023,728099..728174,728206..728397,728518..728607,728644..>728749)	Acanthamoeba castellanii str. Neff	14918037
ACA1_060670	mRNA	ACA1_060670	NW_004457442.1	728968	731499	D	ACA1_060670	join(<728968..729044,729280..729402,729518..729657,729788..729939,730035..730119,730228..730304,730373..730479,730555..730630,730721..730794,730930..731054,731163..731271,731373..>731499)	Acanthamoeba castellanii str. Neff	14918038
ACA1_060680	mRNA	ACA1_060680	NW_004457442.1	732012	732554	D	ACA1_060680	<732012..>732554	Acanthamoeba castellanii str. Neff	14918039
ACA1_060690	mRNA	ACA1_060690	NW_004457442.1	732943	733482	D	ACA1_060690	<732943..>733482	Acanthamoeba castellanii str. Neff	14918261
ACA1_060700	mRNA	ACA1_060700	NW_004457442.1	733935	734591	D	ACA1_060700	<733935..>734591	Acanthamoeba castellanii str. Neff	14918262
ACA1_060710	mRNA	ACA1_060710	NW_004457442.1	734768	737632	R	ACA1_060710	complement(join(<734768..734920,735047..735176,735285..735403,735514..735615,735758..735848,735996..736057,736144..736332,736472..736594,736653..736728,736800..736920,737009..737163,737246..737441,737545..>737632))	Acanthamoeba castellanii str. Neff	14918263
ACA1_060720	mRNA	ACA1_060720	NW_004457442.1	737949	745035	R	ACA1_060720	complement(join(<737949..740387,740401..740977,741116..742602,742660..743517,743548..743924,744000..>745035))	Acanthamoeba castellanii str. Neff	14918264
ACA1_060740	mRNA	ACA1_060740	NW_004457442.1	746580	749531	R	ACA1_060740	complement(join(<746580..747077,747090..747203,747413..748321,748454..748644,749288..>749531))	Acanthamoeba castellanii str. Neff	14918265
ACA1_060750	mRNA	ACA1_060750	NW_004457442.1	750907	759379	R	ACA1_060750	complement(join(<750907..751140,751357..751506,751615..752274,752359..752490,753711..753827,754014..754739,755040..755129,755555..756676,756779..757965,758064..758265,758370..758426,758437..758594,758678..758842,758977..759077,759193..759331,759367..>759379))	Acanthamoeba castellanii str. Neff	14918266
ACA1_060860	mRNA	ACA1_060860	NW_004457442.1	760128	764842	R	ACA1_060860	complement(join(<760128..761870,762022..762081,762092..762607,762643..762737,762843..762946,763050..763203,763281..763362,763643..763923,763988..764463,764541..>764842))	Acanthamoeba castellanii str. Neff	14918267
ACA1_060870	mRNA	ACA1_060870	NW_004457442.1	765198	765860	D	ACA1_060870	<765198..>765860	Acanthamoeba castellanii str. Neff	14918268
ACA1_060880	mRNA	ACA1_060880	NW_004457442.1	766527	767216	R	ACA1_060880	complement(join(<766527..766982,767010..>767216))	Acanthamoeba castellanii str. Neff	14918269
ACA1_060890	mRNA	ACA1_060890	NW_004457442.1	767538	773266	R	ACA1_060890	complement(join(<767538..767686,767857..767979,768060..768390,768474..769057,769167..769253,769342..769468,769548..769825,769892..770003,770093..770939,771063..771164,771252..771465,771551..771778,771889..772416,772691..772794,773115..>773266))	Acanthamoeba castellanii str. Neff	14918270
ACA1_060900	mRNA	ACA1_060900	NW_004457442.1	773627	775212	R	ACA1_060900	complement(join(<773627..774784,774910..>775212))	Acanthamoeba castellanii str. Neff	14918271
ACA1_060910	mRNA	ACA1_060910	NW_004457442.1	775570	777471	R	ACA1_060910	complement(join(<775570..776202,776220..776912,776985..777361,777465..>777471))	Acanthamoeba castellanii str. Neff	14918272
ACA1_060920	mRNA	ACA1_060920	NW_004457442.1	778570	781721	R	ACA1_060920	complement(join(<778570..778751,778838..778912,779009..779077,779185..779329,779534..779670,779834..779879,779952..780343,780404..780517,780570..780659,780829..780888,780994..781141,781238..781530,781652..>781721))	Acanthamoeba castellanii str. Neff	14918273
ACA1_060930	mRNA	ACA1_060930	NW_004457442.1	782233	784277	D	ACA1_060930	join(<782233..782291,782461..782550,782618..782725,782873..>784277)	Acanthamoeba castellanii str. Neff	14918274
ACA1_060940	mRNA	ACA1_060940	NW_004457442.1	784418	786131	R	ACA1_060940	complement(join(<784418..784504,784584..785178,785328..785577,785690..786088,786107..>786131))	Acanthamoeba castellanii str. Neff	14918275
ACA1_060950	mRNA	ACA1_060950	NW_004457442.1	786784	787891	D	ACA1_060950	join(<786784..787614,787685..>787891)	Acanthamoeba castellanii str. Neff	14918276
ACA1_060960	mRNA	ACA1_060960	NW_004457442.1	788050	789030	R	ACA1_060960	complement(join(<788050..788142,788179..>789030))	Acanthamoeba castellanii str. Neff	14918277
ACA1_060970	mRNA	ACA1_060970	NW_004457442.1	789221	792056	R	ACA1_060970	complement(join(<789221..789256,789514..789582,789674..789881,789956..790065,790226..790622,790710..790933,791014..791412,791589..791705,791814..>792056))	Acanthamoeba castellanii str. Neff	14918278
ACA1_060980	mRNA	ACA1_060980	NW_004457442.1	792182	792808	R	ACA1_060980	complement(join(<792182..792566,792717..>792808))	Acanthamoeba castellanii str. Neff	14918279
ACA1_060990	mRNA	ACA1_060990	NW_004457442.1	793154	795920	R	ACA1_060990	complement(join(<793154..793259,793336..793412,793496..793644,793710..793799,793859..793948,793978..794075,794197..794301,794442..794624,794714..794812,794900..795001,795153..795203,795330..795423,795504..795684,795807..>795920))	Acanthamoeba castellanii str. Neff	14918280
ACA1_061000	mRNA	ACA1_061000	NW_004457442.1	796179	798185	R	ACA1_061000	complement(join(<796179..796250,796329..796498,796585..796689,796797..796926,797084..797173,797281..797379,797679..797736,797852..797940,798093..>798185))	Acanthamoeba castellanii str. Neff	14918281
ACA1_061010	mRNA	ACA1_061010	NW_004457442.1	798468	799056	R	ACA1_061010	complement(join(<798468..798530,798656..798761,798971..>799056))	Acanthamoeba castellanii str. Neff	14918282
ACA1_061020	mRNA	ACA1_061020	NW_004457442.1	799144	800305	R	ACA1_061020	complement(join(<799144..799274,799341..799448,799523..799627,799710..799816,799878..799951,800147..>800305))	Acanthamoeba castellanii str. Neff	14917998
ACA1_061030	mRNA	ACA1_061030	NW_004457442.1	801746	803846	D	ACA1_061030	join(<801746..801893,801988..802052,802214..802300,802383..>803846)	Acanthamoeba castellanii str. Neff	14917999
ACA1_061040	mRNA	ACA1_061040	NW_004457442.1	804177	806567	D	ACA1_061040	join(<804177..804436,804520..804640,804818..804922,805036..805187,805285..805370,805585..805649,805717..805806,805913..806024,806106..806192,806283..806347,806430..>806567)	Acanthamoeba castellanii str. Neff	14918000
ACA1_061050	mRNA	ACA1_061050	NW_004457442.1	807038	808415	D	ACA1_061050	join(<807038..807101,807193..>808415)	Acanthamoeba castellanii str. Neff	14918001
ACA1_061060	mRNA	ACA1_061060	NW_004457442.1	808578	810427	R	ACA1_061060	complement(join(<808578..808639,808973..809136,809209..809363,809551..809693,809759..809843,810060..810220,810316..>810427))	Acanthamoeba castellanii str. Neff	14918002
ACA1_061070	mRNA	ACA1_061070	NW_004457442.1	810710	813388	D	ACA1_061070	join(<810710..810892,811033..811141,811214..811305,811438..811645,811880..811972,812089..812174,812293..812379,812447..812507,812628..812693,812798..812899,812986..813137,813242..>813388)	Acanthamoeba castellanii str. Neff	14918003
ACA1_061080	mRNA	ACA1_061080	NW_004457442.1	813652	815556	R	ACA1_061080	complement(join(<813652..813754,813856..813978,814083..814381,814483..814578,814662..814805,814889..815019,815204..815375,815518..>815556))	Acanthamoeba castellanii str. Neff	14918004
ACA1_061090	mRNA	ACA1_061090	NW_004457442.1	815966	819703	D	ACA1_061090	join(<815966..816060,816145..816184,816282..816408,816509..816639,816756..816875,816975..817089,817220..817305,817384..817506,817570..817715,817823..817943,818026..818248,818375..818856,818996..>819703)	Acanthamoeba castellanii str. Neff	14918005
ACA1_061100	mRNA	ACA1_061100	NW_004457442.1	819800	821084	R	ACA1_061100	complement(join(<819800..820169,820245..820437,820488..820577,820636..820740,820973..>821084))	Acanthamoeba castellanii str. Neff	14918006
ACA1_061110	mRNA	ACA1_061110	NW_004457442.1	821522	822449	R	ACA1_061110	complement(join(<821522..821719,821794..822071,822166..822256,822333..>822449))	Acanthamoeba castellanii str. Neff	14918007
ACA1_061120	mRNA	ACA1_061120	NW_004457442.1	822537	827634	R	ACA1_061120	complement(join(<822537..822640,822738..822855,822979..825449,825536..825601,825694..825828,825936..826005,826117..826203,826294..826372,826452..826800,826942..827005,827127..827205,827275..827355,827489..>827634))	Acanthamoeba castellanii str. Neff	14918008
ACA1_061130	mRNA	ACA1_061130	NW_004457442.1	828109	830180	R	ACA1_061130	complement(join(<828109..828186,828222..828410,828501..828573,828658..828754,828839..828996,829056..829154,829229..829406,829467..829579,829657..>830180))	Acanthamoeba castellanii str. Neff	14918009
ACA1_061140	mRNA	ACA1_061140	NW_004457442.1	831032	834184	R	ACA1_061140	complement(join(<831032..831226,831329..831634,831710..831829,831959..832213,832315..833025,833353..833415,833693..>834184))	Acanthamoeba castellanii str. Neff	14918010
ACA1_061150	mRNA	ACA1_061150	NW_004457442.1	835048	842489	R	ACA1_061150	complement(join(<835048..835271,835405..836185,836258..836773,836864..837026,837154..837418,837533..837695,837821..837923,838019..838295,838383..838958,839034..839357,839470..839893,840010..840124,840196..840426,840610..840710,840785..840844,840937..841340,841485..841839,841927..842215,842356..>842489))	Acanthamoeba castellanii str. Neff	14918011
ACA1_061160	mRNA	ACA1_061160	NW_004457442.1	842997	844174	R	ACA1_061160	complement(join(<842997..843039,843133..843184,843406..843496,843574..843935,844024..>844174))	Acanthamoeba castellanii str. Neff	14918012
ACA1_061170	mRNA	ACA1_061170	NW_004457442.1	844437	845660	R	ACA1_061170	complement(join(<844437..844539,844645..844894,844999..845155,845448..>845660))	Acanthamoeba castellanii str. Neff	14918013
ACA1_061180	mRNA	ACA1_061180	NW_004457442.1	845962	848927	R	ACA1_061180	complement(join(<845962..846686,846763..846835,846918..847011,847123..847255,847326..847436,847526..848467,848539..848576,848644..>848927))	Acanthamoeba castellanii str. Neff	14918014
ACA1_061190	mRNA	ACA1_061190	NW_004457442.1	849074	850852	D	ACA1_061190	join(<849074..849198,849278..849411,849483..849578,849684..849823,850048..850183,850262..850746,850823..>850852)	Acanthamoeba castellanii str. Neff	14918015
ACA1_061200	mRNA	ACA1_061200	NW_004457442.1	851011	853856	D	ACA1_061200	join(<851011..851116,851229..851374,851473..851578,851675..851779,851898..851977,852088..852162,852276..852400,852508..852656,852763..852971,853154..853352,853442..853548,853677..>853856)	Acanthamoeba castellanii str. Neff	14918016
ACA1_061210	mRNA	ACA1_061210	NW_004457442.1	853986	855664	D	ACA1_061210	join(<853986..854169,854248..854362,854466..854572,854706..854781,854861..855084,855171..>855664)	Acanthamoeba castellanii str. Neff	14918017
ACA1_061220	mRNA	ACA1_061220	NW_004457442.1	856109	856744	D	ACA1_061220	join(<856109..856351,856451..>856744)	Acanthamoeba castellanii str. Neff	14917958
ACA1_061230	mRNA	ACA1_061230	NW_004457442.1	857338	859289	R	ACA1_061230	complement(join(<857338..857410,857515..>859289))	Acanthamoeba castellanii str. Neff	14917959
ACA1_061240	mRNA	ACA1_061240	NW_004457442.1	859418	866270	R	ACA1_061240	complement(join(<859418..859596,859667..859880,859961..860122,860186..860472,860689..860980,861070..861188,861299..861589,861684..861858,861999..862116,862190..862334,862410..862503,862581..862743,862844..863404,863476..863664,863738..863865,863948..864084,864153..864237,864332..864470,864575..864699,864802..864900,865020..865076,865163..865263,865343..>866270))	Acanthamoeba castellanii str. Neff	14917960
ACA1_061250	mRNA	ACA1_061250	NW_004457442.1	866517	867139	D	ACA1_061250	join(<866517..866602,866673..866748,866813..866886,866961..867032,867106..>867139)	Acanthamoeba castellanii str. Neff	14917961
ACA1_061260	mRNA	ACA1_061260	NW_004457442.1	867645	869467	D	ACA1_061260	join(<867645..869205,869223..>869467)	Acanthamoeba castellanii str. Neff	14917962
ACA1_061270	mRNA	ACA1_061270	NW_004457442.1	869621	870345	R	ACA1_061270	complement(join(<869621..869798,869838..870177,870192..>870345))	Acanthamoeba castellanii str. Neff	14917963
ACA1_061280	mRNA	ACA1_061280	NW_004457442.1	870713	873410	D	ACA1_061280	join(<870713..870780,870930..871031,871220..871350,871475..871535,871622..871731,871867..871988,872132..872284,872434..872575,872678..872721,872811..872845,872987..873071,873198..>873410)	Acanthamoeba castellanii str. Neff	14917964
ACA1_061290	mRNA	ACA1_061290	NW_004457442.1	873419	873625	D	ACA1_061290	<873419..>873625	Acanthamoeba castellanii str. Neff	14917965
ACA1_061300	mRNA	ACA1_061300	NW_004457442.1	873779	878106	R	ACA1_061300	complement(join(<873779..873917,874011..875001,875149..875292,875417..875561,875635..875904,876115..876172,876298..876447,876571..876662,876770..877238,877330..877899,878039..>878106))	Acanthamoeba castellanii str. Neff	14917966
ACA1_061310	mRNA	ACA1_061310	NW_004457442.1	878575	878955	R	ACA1_061310	complement(join(<878575..878866,878927..>878955))	Acanthamoeba castellanii str. Neff	14917967
ACA1_061320	mRNA	ACA1_061320	NW_004457442.1	879237	882369	D	ACA1_061320	join(<879237..879333,879398..879618,879746..880031,880092..880451,880573..880733,880822..880951,881047..881322,881396..881488,881575..881741,881847..882129,882269..>882369)	Acanthamoeba castellanii str. Neff	14917968
ACA1_061330	mRNA	ACA1_061330	NW_004457442.1	882484	884856	R	ACA1_061330	complement(join(<882484..882550,882635..882752,882867..882974,883063..883186,883346..883506,883589..883639,883711..883746,883844..883949,884098..884231,884328..884380,884476..884542,884618..884639,884707..>884856))	Acanthamoeba castellanii str. Neff	14917969
ACA1_061340	mRNA	ACA1_061340	NW_004457442.1	885397	886189	R	ACA1_061340	complement(join(<885397..885566,885654..885784,885864..885960,886054..>886189))	Acanthamoeba castellanii str. Neff	14917970
ACA1_061350	mRNA	ACA1_061350	NW_004457442.1	886875	890174	D	ACA1_061350	join(<886875..887004,887067..887103,887276..887421,887532..887619,887759..887846,887935..888002,888142..888294,888368..888512,888593..888705,888786..888903,888974..889045,889183..889335,889432..889556,889649..889801,889883..890035,890126..>890174)	Acanthamoeba castellanii str. Neff	14917971
ACA1_061370	mRNA	ACA1_061370	NW_004457442.1	893285	899266	D	ACA1_061370	join(<893285..894278,894389..894429,894611..894680,894807..894964,895045..895096,895211..895346,895542..895803,895937..896067,896154..896396,896653..896797,896886..897009,897155..897310,897389..897564,897759..897899,897971..898135,898240..898362,898522..898752,898889..>899266)	Acanthamoeba castellanii str. Neff	14917973
ACA1_061390	mRNA	ACA1_061390	NW_004457442.1	900082	912500	R	ACA1_061390	complement(join(<900082..900284,900401..900766,900867..900999,901102..901293,901371..901486,901551..901689,901822..901926,901993..902108,902169..902523,902609..902730,902811..902930,903018..903221,903298..903438,903511..903688,903786..903842,903944..904200,904280..904497,904585..904739,904817..905048,905131..905394,905474..905591,905677..905813,905896..906075,906170..906306,906396..906578,906649..906887,906960..907207,907280..907503,907571..907732,907817..908040,908126..908329,908429..908974,909082..909196,909282..909479,909566..909679,909800..909927,910010..910222,910291..910438,910526..911367,911478..912309,912393..>912500))	Acanthamoeba castellanii str. Neff	14917975
ACA1_061400	mRNA	ACA1_061400	NW_004457442.1	912999	914717	R	ACA1_061400	complement(join(<912999..913056,913149..913251,913343..913564,913629..913817,913897..914070,914177..914338,914418..914526,914646..>914717))	Acanthamoeba castellanii str. Neff	14917976
ACA1_061410	mRNA	ACA1_061410	NW_004457442.1	914844	917610	D	ACA1_061410	join(<914844..914900,915155..915221,915302..915419,915520..915790,915872..916024,916266..916336,916509..916614,916703..916733,916831..916940,917023..917133,917242..917310,917383..917430,917512..>917610)	Acanthamoeba castellanii str. Neff	14918472
ACA1_061420	mRNA	ACA1_061420	NW_004457442.1	918272	926289	D	ACA1_061420	join(<918272..918454,918553..918657,918736..918837,918952..919122,919216..919364,919426..919649,919727..919870,919935..920122,920219..920510,920577..920720,920835..921248,921340..921687,921776..922518,922609..922659,922969..923178,923263..923415,923586..923702,923813..923869,923948..924001,924062..924185,924283..924381,924498..924597,924687..924733,924816..924954,925098..925204,925319..925401,925562..925684,925791..925938,926016..926108,926195..>926289)	Acanthamoeba castellanii str. Neff	14918473
ACA1_061430	mRNA	ACA1_061430	NW_004457442.1	926397	927206	R	ACA1_061430	complement(join(<926397..926501,926622..926878,926900..927027,927094..>927206))	Acanthamoeba castellanii str. Neff	14918474
ACA1_061440	mRNA	ACA1_061440	NW_004457442.1	927336	931701	R	ACA1_061440	complement(join(<927336..927442,927521..927707,927800..927965,928137..928507,928626..928770,928843..928985,929102..929158,929262..929328,929475..929851,929928..930047,930132..930257,930277..930364,930410..930483,930608..930739,930814..>931701))	Acanthamoeba castellanii str. Neff	14918475
ACA1_061450	mRNA	ACA1_061450	NW_004457442.1	932146	932433	D	ACA1_061450	<932146..>932433	Acanthamoeba castellanii str. Neff	14918476
ACA1_061460	mRNA	ACA1_061460	NW_004457442.1	932538	935051	R	ACA1_061460	complement(join(<932538..932652,932734..932956,933048..933185,933261..933377,933436..933545,933650..933776,933854..933991,934146..934356,934448..934597,934740..>935051))	Acanthamoeba castellanii str. Neff	14918477
ACA1_061470	mRNA	ACA1_061470	NW_004457442.1	935717	937265	R	ACA1_061470	complement(join(<935717..936026,936119..936960,937164..>937265))	Acanthamoeba castellanii str. Neff	14918478
ACA1_061480	mRNA	ACA1_061480	NW_004457442.1	937394	940028	R	ACA1_061480	complement(join(<937394..938604,938715..938987,939235..939785,939994..>940028))	Acanthamoeba castellanii str. Neff	14918479
ACA1_061490	mRNA	ACA1_061490	NW_004457442.1	940357	942177	R	ACA1_061490	complement(join(<940357..940417,940565..940590,940685..941267,941438..941501,941592..>942177))	Acanthamoeba castellanii str. Neff	14918480
ACA1_061500	mRNA	ACA1_061500	NW_004457442.1	942424	947805	D	ACA1_061500	join(<942424..942490,942597..942815,943019..943078,943251..943300,943401..943535,943653..943715,943799..943859,943924..944040,944130..944176,944265..944369,944467..944520,944647..944837,944917..945073,945207..945591,945681..945838,945996..946487,946644..946862,946947..947129,947324..947506,947659..>947805)	Acanthamoeba castellanii str. Neff	14918481
ACA1_061510	mRNA	ACA1_061510	NW_004457442.1	948216	953293	D	ACA1_061510	join(<948216..948273,948344..948565,948716..948825,948925..949128,949230..949290,949385..949498,949583..949782,949866..949949,950054..950157,950279..950462,950543..950794,950865..951042,951216..951496,951630..951716,951815..952030,952133..952219,952302..952520,952624..952806,952926..953108,953189..>953293)	Acanthamoeba castellanii str. Neff	14918482
ACA1_061520	mRNA	ACA1_061520	NW_004457442.1	953452	954008	D	ACA1_061520	join(<953452..953499,953595..953621,953693..953755,953874..>954008)	Acanthamoeba castellanii str. Neff	14918483
ACA1_061530	mRNA	ACA1_061530	NW_004457442.1	954159	955005	R	ACA1_061530	complement(join(<954159..954456,954535..954853,954996..>955005))	Acanthamoeba castellanii str. Neff	14918484
ACA1_061540	mRNA	ACA1_061540	NW_004457442.1	955381	960080	R	ACA1_061540	complement(join(<955381..955838,955920..956004,956096..956559,956642..956801,956871..957059,957165..957299,957397..957530,957632..957771,957850..957920,958007..958221,958319..958508,958604..958856,958939..959033,959131..959194,959291..959412,959526..959591,959678..959804,959941..>960080))	Acanthamoeba castellanii str. Neff	14918485
ACA1_061550	mRNA	ACA1_061550	NW_004457442.1	960344	961261	D	ACA1_061550	join(<960344..960401,960481..960874,960956..961053,961113..>961261)	Acanthamoeba castellanii str. Neff	14918486
ACA1_061560	mRNA	ACA1_061560	NW_004457442.1	961356	962658	R	ACA1_061560	complement(join(<961356..962033,962253..962335,962439..>962658))	Acanthamoeba castellanii str. Neff	14918487
ACA1_061570	mRNA	ACA1_061570	NW_004457442.1	962931	964475	R	ACA1_061570	complement(join(<962931..963596,963681..963779,963855..963989,964070..964176,964244..>964475))	Acanthamoeba castellanii str. Neff	14918488
ACA1_061580	mRNA	ACA1_061580	NW_004457442.1	965253	966602	D	ACA1_061580	join(<965253..965956,966065..>966602)	Acanthamoeba castellanii str. Neff	14918489
ACA1_061590	mRNA	ACA1_061590	NW_004457442.1	967095	969421	R	ACA1_061590	complement(join(<967095..967230,967338..967400,967492..967857,967952..968050,968119..968175,968265..968385,968517..968573,968699..968751,968845..968915,969011..969079,969164..969278,969351..>969421))	Acanthamoeba castellanii str. Neff	14918490
ACA1_061600	mRNA	ACA1_061600	NW_004457442.1	969508	973337	R	ACA1_061600	complement(join(<969508..969606,969697..969803,969889..970007,970090..970164,970241..970283,970365..970491,970660..970787,970897..971038,971131..971229,971310..971389,971500..971632,971733..971862,971996..972096,972164..972297,972433..972519,972732..972837,972885..>973337))	Acanthamoeba castellanii str. Neff	14917818
ACA1_061610	mRNA	ACA1_061610	NW_004457442.1	973476	983750	R	ACA1_061610	complement(join(<973476..973601,973691..973843,973967..974110,974244..974366,974501..974661,974744..974852,974997..976252,976358..976541,976613..977150,977185..977255,977315..977738,977823..977978,978105..978252,978345..978444,978594..978797,978954..979097,979239..979462,979567..979798,979904..980021,980200..980670,980745..980831,980934..981070,981214..981243,981396..981517,981681..981801,981979..982055,982150..982372,982459..982548,982693..982818,982912..983012,983109..983251,983371..>983750))	Acanthamoeba castellanii str. Neff	14917819
ACA1_061620	mRNA	ACA1_061620	NW_004457442.1	984421	986100	R	ACA1_061620	complement(join(<984421..984566,984646..984786,985006..985160,985234..985397,985440..985522,985597..985699,985733..985858,985927..>986100))	Acanthamoeba castellanii str. Neff	14917820
ACA1_061630	mRNA	ACA1_061630	NW_004457442.1	986285	990025	D	ACA1_061630	join(<986285..986546,986637..986893,986996..987396,987539..987668,987760..987900,988024..988177,988292..988420,988518..988671,988797..988921,989010..989143,989237..989370,989461..989550,989608..989690,989763..>990025)	Acanthamoeba castellanii str. Neff	14917821
ACA1_061640	mRNA	ACA1_061640	NW_004457442.1	990624	992812	D	ACA1_061640	join(<990624..990734,990859..991014,991094..991176,991252..991355,991434..991601,991777..991918,992044..992146,992223..992278,992365..992470,992555..>992812)	Acanthamoeba castellanii str. Neff	14917822
ACA1_061650	mRNA	ACA1_061650	NW_004457442.1	992998	996542	R	ACA1_061650	complement(join(<992998..993325,993406..993547,993625..993744,993864..993974,994068..994168,994250..994395,994507..994639,994725..994768,994937..995085,995294..995318,995392..995492,995579..995870,995995..996092,996157..996262,996393..996430,996470..>996542))	Acanthamoeba castellanii str. Neff	14917823
ACA1_061660	mRNA	ACA1_061660	NW_004457442.1	996784	997362	D	ACA1_061660	<996784..>997362	Acanthamoeba castellanii str. Neff	14917824
ACA1_061670	mRNA	ACA1_061670	NW_004457442.1	997690	1003365	R	ACA1_061670	complement(join(<997690..998798,998897..999024,999108..999237,999362..999525,999602..999687,999791..999846,999913..1000033,1000152..1000290,1000365..1000462,1000605..1001014,1001085..1001264,1001360..1001473,1001552..1001738,1001829..1001906,1002011..1002178,1002285..1002349,1002428..1002503,1002602..1002731,1002830..1002912,1003019..1003158,1003290..>1003365))	Acanthamoeba castellanii str. Neff	14917825
ACA1_061680	mRNA	ACA1_061680	NW_004457442.1	1004464	1010714	D	ACA1_061680	join(<1004464..1004866,1005023..1005114,1005216..1005263,1005346..1005471,1005716..1005752,1005827..1005900,1006122..1006190,1006314..1006389,1006488..1006536,1006608..1006713,1006845..1006967,1007072..1007150,1007261..1007350,1007419..1007515,1007593..1007673,1007955..1008006,1008130..1008229,1008315..1008718,1008815..1009569,1009661..1010082,1010168..1010291,1010402..>1010714)	Acanthamoeba castellanii str. Neff	14917826
ACA1_061690	mRNA	ACA1_061690	NW_004457442.1	1010805	1011988	D	ACA1_061690	join(<1010805..1010910,1010991..1011104,1011209..1011309,1011436..1011542,1011588..1011666,1011785..>1011988)	Acanthamoeba castellanii str. Neff	14917827
ACA1_061700	mRNA	ACA1_061700	NW_004457442.1	1012206	1014401	D	ACA1_061700	join(<1012206..1012396,1012519..1012685,1012752..1012847,1013008..1013194,1013366..1013449,1013523..1013591,1013686..1013822,1013922..1014099,1014194..>1014401)	Acanthamoeba castellanii str. Neff	14917828
ACA1_061710	mRNA	ACA1_061710	NW_004457442.1	1014805	1016539	D	ACA1_061710	join(<1014805..1015227,1015359..1015425,1015518..1015602,1015721..1016185,1016278..>1016539)	Acanthamoeba castellanii str. Neff	14917829
ACA1_061730	mRNA	ACA1_061730	NW_004457442.1	1024166	1026217	R	ACA1_061730	complement(join(<1024166..1025674,1025749..1025847,1025914..1025985,1026002..>1026217))	Acanthamoeba castellanii str. Neff	14917831
ACA1_061740	mRNA	ACA1_061740	NW_004457442.1	1026925	1032728	D	ACA1_061740	join(<1026925..1028303,1028381..1029958,1030039..1030189,1030261..1030395,1030476..1030547,1030619..1030818,1030888..1030987,1031079..1031197,1031294..1031374,1031457..1031569,1031645..1031750,1031841..1031961,1032053..1032302,1032397..1032458,1032554..1032631,1032708..>1032728)	Acanthamoeba castellanii str. Neff	14917832
ACA1_061750	mRNA	ACA1_061750	NW_004457442.1	1033056	1033645	D	ACA1_061750	join(<1033056..1033151,1033281..1033365,1033455..>1033645)	Acanthamoeba castellanii str. Neff	14917833
ACA1_061760	mRNA	ACA1_061760	NW_004457442.1	1033822	1036521	D	ACA1_061760	join(<1033822..1034013,1034120..1034213,1034327..1034507,1034594..1034814,1034910..1035007,1035144..1035208,1035284..1035392,1035449..1035527,1035601..1035687,1035775..1035871,1035966..1036081,1036226..1036325,1036431..>1036521)	Acanthamoeba castellanii str. Neff	14918222
ACA1_061770	mRNA	ACA1_061770	NW_004457442.1	1036715	1039073	R	ACA1_061770	complement(join(<1036715..1036856,1036966..1037029,1037091..1037231,1037355..1037430,1037513..1037625,1037729..1037840,1037979..1038044,1038120..1038254,1038363..1038433,1038543..1038680,1038794..1038891,1039006..>1039073))	Acanthamoeba castellanii str. Neff	14918223
ACA1_061780	mRNA	ACA1_061780	NW_004457442.1	1040105	1043650	D	ACA1_061780	join(<1040105..1040341,1040502..1040757,1040825..1040917,1040988..1041103,1041184..1041299,1041405..1041534,1041616..1041744,1041825..1041944,1042056..1042189,1042262..1042427,1042518..1042656,1042755..1043020,1043094..1043305,1043371..>1043650)	Acanthamoeba castellanii str. Neff	14918224
ACA1_061790	mRNA	ACA1_061790	NW_004457442.1	1043979	1045694	D	ACA1_061790	join(<1043979..1044532,1044710..1044969,1045043..1045258,1045333..>1045694)	Acanthamoeba castellanii str. Neff	14918225
ACA1_061800	mRNA	ACA1_061800	NW_004457442.1	1045787	1047898	R	ACA1_061800	complement(join(<1045787..1045907,1045991..1046448,1046581..1047614,1047706..>1047898))	Acanthamoeba castellanii str. Neff	14918226
ACA1_061810	mRNA	ACA1_061810	NW_004457442.1	1048135	1052029	D	ACA1_061810	join(<1048135..1048432,1048498..1048599,1048702..1048829,1048967..1049110,1049214..1049287,1049357..1049442,1049516..1049805,1049876..1050037,1050131..1050245,1050316..1050712,1050765..1050882,1050981..1051159,1051225..1051357,1051430..1051564,1051646..1051776,1051882..>1052029)	Acanthamoeba castellanii str. Neff	14918227
ACA1_061830	mRNA	ACA1_061830	NW_004457442.1	1053556	1058057	R	ACA1_061830	complement(join(<1053556..1053899,1053984..1054106,1054213..1054339,1054448..1054521,1054620..1054716,1054802..1054897,1055029..1055197,1055325..1055456,1055569..1055752,1055852..1056173,1056295..1056970,1057076..1057400,1057490..1057626,1057771..1057860,1058017..>1058057))	Acanthamoeba castellanii str. Neff	14918229
ACA1_061840	mRNA	ACA1_061840	NW_004457442.1	1058188	1061620	R	ACA1_061840	complement(join(<1058188..1058305,1058381..1059494,1059584..1059731,1059900..1059958,1060039..1060114,1060180..1060249,1060297..1060322,1060365..1060477,1060549..1060618,1060677..1060767,1060864..1060927,1061086..1061171,1061239..1061384,1061459..>1061620))	Acanthamoeba castellanii str. Neff	14918230
ACA1_061850	mRNA	ACA1_061850	NW_004457442.1	1063277	1065206	D	ACA1_061850	join(<1063277..1063330,1063358..1063903,1063970..1064158,1064227..1064423,1064501..1064661,1064740..1064910,1064982..1065099,1065161..>1065206)	Acanthamoeba castellanii str. Neff	14918231
ACA1_061860	mRNA	ACA1_061860	NW_004457442.1	1065452	1066896	D	ACA1_061860	join(<1065452..1065715,1065790..1065857,1065950..1066109,1066179..1066285,1066359..1066548,1066618..>1066896)	Acanthamoeba castellanii str. Neff	14918232
ACA1_061870	mRNA	ACA1_061870	NW_004457442.1	1068690	1069548	D	ACA1_061870	join(<1068690..1068720,1068804..1068932,1069009..1069166,1069264..1069341,1069426..>1069548)	Acanthamoeba castellanii str. Neff	14918233
ACA1_061880	mRNA	ACA1_061880	NW_004457442.1	1069710	1070376	R	ACA1_061880	complement(join(<1069710..1069882,1069968..>1070376))	Acanthamoeba castellanii str. Neff	14918234
ACA1_061890	mRNA	ACA1_061890	NW_004457442.1	1070695	1072632	R	ACA1_061890	complement(join(<1070695..1070828,1070906..1071001,1071064..1071157,1071233..1071466,1071565..1071680,1071767..1071854,1071944..1072162,1072245..1072334,1072432..>1072632))	Acanthamoeba castellanii str. Neff	14918235
ACA1_061900	mRNA	ACA1_061900	NW_004457442.1	1072676	1075932	R	ACA1_061900	complement(join(<1072676..1072934,1073043..1073163,1073399..1073541,1073610..1073764,1073855..1073918,1073995..1074126,1074214..1074373,1074466..1074598,1074680..1074877,1074961..1075032,1075140..1075231,1075469..1075566,1075676..>1075932))	Acanthamoeba castellanii str. Neff	14918236
ACA1_061910	mRNA	ACA1_061910	NW_004457442.1	1076446	1078183	D	ACA1_061910	join(<1076446..1076815,1076878..1077093,1077202..1077359,1077482..1077583,1077653..>1078183)	Acanthamoeba castellanii str. Neff	14918237
ACA1_061920	mRNA	ACA1_061920	NW_004457442.1	1078336	1079858	R	ACA1_061920	complement(join(<1078336..1078425,1078506..1078595,1078682..1079152,1079242..1079703,1079790..>1079858))	Acanthamoeba castellanii str. Neff	14918238
ACA1_061930	mRNA	ACA1_061930	NW_004457442.1	1080183	1081570	R	ACA1_061930	complement(join(<1080183..1080240,1080300..1080384,1080449..1080511,1080570..1080702,1080817..1080884,1080980..1081160,1081228..1081298,1081366..>1081570))	Acanthamoeba castellanii str. Neff	14918239
ACA1_061940	mRNA	ACA1_061940	NW_004457442.1	1081841	1082688	R	ACA1_061940	complement(join(<1081841..1081906,1081985..1082082,1082149..1082266,1082389..>1082688))	Acanthamoeba castellanii str. Neff	14918240
ACA1_061950	mRNA	ACA1_061950	NW_004457442.1	1082897	1084006	R	ACA1_061950	complement(join(<1082897..1083239,1083331..1083440,1083671..>1084006))	Acanthamoeba castellanii str. Neff	14918241
ACA1_061960	mRNA	ACA1_061960	NW_004457442.1	1084422	1088256	R	ACA1_061960	complement(join(<1084422..1085614,1085687..1086244,1086326..1086943,1087099..1087764,1088013..>1088256))	Acanthamoeba castellanii str. Neff	14918117
ACA1_061970	mRNA	ACA1_061970	NW_004457442.1	1088706	1091729	R	ACA1_061970	complement(join(<1088706..1089175,1089255..1089362,1089443..1089614,1089678..1089782,1090079..1090294,1090359..1090508,1090721..1090834,1090933..1091001,1091272..1091341,1091416..1091556,1091635..>1091729))	Acanthamoeba castellanii str. Neff	14918118
ACA1_061980	mRNA	ACA1_061980	NW_004457442.1	1092350	1093279	D	ACA1_061980	join(<1092350..1092531,1092603..1092694,1092765..1092866,1092948..1093017,1093087..>1093279)	Acanthamoeba castellanii str. Neff	14918119
ACA1_061990	mRNA	ACA1_061990	NW_004457442.1	1093451	1099264	D	ACA1_061990	join(<1093451..1093502,1093622..1093677,1093814..1093927,1094011..1094136,1094208..1094578,1094692..1094784,1094855..1094925,1094999..1095203,1095287..1095388,1095466..1095757,1095848..1096022,1096122..1096271,1096388..1096512,1096623..1096697,1096809..1096950,1097048..1097179,1097310..1097378,1097471..1097525,1097621..1097841,1097930..1098038,1098157..1098280,1098357..1098411,1098484..1098521,1098570..1098656,1098758..1098913,1099139..>1099264)	Acanthamoeba castellanii str. Neff	14918120
ACA1_062000	mRNA	ACA1_062000	NW_004457442.1	1099602	1100663	R	ACA1_062000	complement(join(<1099602..1100468,1100652..>1100663))	Acanthamoeba castellanii str. Neff	14918121
ACA1_062010	mRNA	ACA1_062010	NW_004457442.1	1101149	1102303	R	ACA1_062010	complement(join(<1101149..1101269,1101350..1101480,1101833..>1102303))	Acanthamoeba castellanii str. Neff	14918122
ACA1_062020	mRNA	ACA1_062020	NW_004457442.1	1102894	1105188	D	ACA1_062020	join(<1102894..1102927,1103002..1103065,1103226..1103369,1103478..1103533,1103654..1103824,1103934..1104306,1104398..1104523,1104643..1104764,1104845..>1105188)	Acanthamoeba castellanii str. Neff	14918123
ACA1_062030	mRNA	ACA1_062030	NW_004457442.1	1104846	1107283	R	ACA1_062030	complement(join(<1104846..1104893,1104988..1105184,1105356..1105503,1105608..1105725,1105798..1106061,1106140..1106241,1106331..1106556,1106620..1106670,1106827..>1107283))	Acanthamoeba castellanii str. Neff	14918124
ACA1_062040	mRNA	ACA1_062040	NW_004457442.1	1107351	1108913	R	ACA1_062040	complement(join(<1107351..1108161,1108249..1108407,1108515..1108773,1108850..>1108913))	Acanthamoeba castellanii str. Neff	14918125
ACA1_062050	mRNA	ACA1_062050	NW_004457442.1	1110053	1111692	D	ACA1_062050	join(<1110053..1110195,1110275..1110771,1110840..1110910,1110979..>1111692)	Acanthamoeba castellanii str. Neff	14918126
ACA1_062060	mRNA	ACA1_062060	NW_004457442.1	1112057	1115901	D	ACA1_062060	join(<1112057..1112113,1112260..1112808,1112921..1112997,1113073..1113150,1113266..1113375,1113516..1113633,1114525..1114628,1114729..1114836,1114928..1115049,1115184..1115415,1115499..1115679,1115763..>1115901)	Acanthamoeba castellanii str. Neff	14918127
ACA1_062070	mRNA	ACA1_062070	NW_004457442.1	1113817	1114213	R	ACA1_062070	complement(join(<1113817..1114002,1114133..>1114213))	Acanthamoeba castellanii str. Neff	14918128
ACA1_062080	mRNA	ACA1_062080	NW_004457442.1	1116038	1117892	R	ACA1_062080	complement(join(<1116038..1116354,1116432..1116544,1116657..1116765,1116849..1117108,1117221..1117397,1117471..1117584,1117651..1117747,1117853..>1117892))	Acanthamoeba castellanii str. Neff	14918129
ACA1_062090	mRNA	ACA1_062090	NW_004457442.1	1118242	1120412	D	ACA1_062090	join(<1118242..1118355,1118412..1118458,1118534..1118627,1118708..1118798,1118885..1118971,1119038..1119120,1119196..1119390,1119463..1119567,1119648..1119875,1119952..1120044,1120107..>1120412)	Acanthamoeba castellanii str. Neff	14918130
ACA1_062100	mRNA	ACA1_062100	NW_004457442.1	1120546	1121055	R	ACA1_062100	complement(join(<1120546..1120560,1120649..1120752,1120842..>1121055))	Acanthamoeba castellanii str. Neff	14918131
ACA1_062110	mRNA	ACA1_062110	NW_004457442.1	1121329	1122884	R	ACA1_062110	complement(join(<1121329..1121580,1121638..1122089,1122458..1122575,1122666..>1122884))	Acanthamoeba castellanii str. Neff	14918132
ACA1_062120	mRNA	ACA1_062120	NW_004457442.1	1123084	1125916	D	ACA1_062120	join(<1123084..1123094,1123476..1123554,1123669..1123938,1124014..1124119,1124213..1124323,1124460..1124574,1124646..1124794,1124875..1125660,1125747..>1125916)	Acanthamoeba castellanii str. Neff	14918133
ACA1_062130	mRNA	ACA1_062130	NW_004457442.1	1126161	1127692	D	ACA1_062130	join(<1126161..1126354,1126444..1126506,1126597..1126711,1126800..1126865,1126984..1127085,1127168..1127350,1127418..1127490,1127628..>1127692)	Acanthamoeba castellanii str. Neff	14918134
ACA1_062140	mRNA	ACA1_062140	NW_004457442.1	1127583	1128388	R	ACA1_062140	complement(join(<1127583..1127688,1127767..1127826,1127961..>1128388))	Acanthamoeba castellanii str. Neff	14918135
ACA1_062150	mRNA	ACA1_062150	NW_004457442.1	1128559	1130653	R	ACA1_062150	complement(join(<1128559..1128704,1128822..1129005,1129084..1129209,1129290..1129490,1129585..1129701,1129815..1129933,1130003..1130105,1130248..1130397,1130519..>1130653))	Acanthamoeba castellanii str. Neff	14918136
ACA1_062160	mRNA	ACA1_062160	NW_004457442.1	1130923	1133251	D	ACA1_062160	join(<1130923..1130997,1131077..1131525,1131639..1131695,1131774..1131908,1131996..1132163,1132282..1132433,1132508..1132756,1132878..1132960,1133045..>1133251)	Acanthamoeba castellanii str. Neff	14918137
ACA1_062170	mRNA	ACA1_062170	NW_004457442.1	1133304	1134119	R	ACA1_062170	complement(<1133304..>1134119)	Acanthamoeba castellanii str. Neff	14917915
ACA1_062180	mRNA	ACA1_062180	NW_004457442.1	1134433	1135646	R	ACA1_062180	complement(join(<1134433..1134693,1134782..1134910,1135013..1135104,1135179..1135272,1135341..>1135646))	Acanthamoeba castellanii str. Neff	14917916
ACA1_062190	mRNA	ACA1_062190	NW_004457442.1	1135847	1136598	D	ACA1_062190	join(<1135847..1135981,1136073..1136204,1136235..1136253,1136345..>1136598)	Acanthamoeba castellanii str. Neff	14917917
ACA1_062200	mRNA	ACA1_062200	NW_004457442.1	1136793	1138240	R	ACA1_062200	complement(join(<1136793..1137001,1137137..1137307,1137378..1137493,1137559..1137630,1137714..1137844,1137929..1138047,1138204..>1138240))	Acanthamoeba castellanii str. Neff	14917918
ACA1_062210	mRNA	ACA1_062210	NW_004457442.1	1138819	1140913	D	ACA1_062210	join(<1138819..1138860,1138899..1139345,1139439..1139604,1139705..1139892,1139995..1140083,1140120..1140187,1140310..1140580,1140655..>1140913)	Acanthamoeba castellanii str. Neff	14917919
ACA1_062220	mRNA	ACA1_062220	NW_004457442.1	1141458	1142504	D	ACA1_062220	join(<1141458..1141994,1142040..>1142504)	Acanthamoeba castellanii str. Neff	14917920
ACA1_062230	mRNA	ACA1_062230	NW_004457442.1	1142671	1144447	R	ACA1_062230	complement(join(<1142671..1143182,1143262..1143343,1143433..1143503,1143576..1143764,1143867..1144263,1144394..>1144447))	Acanthamoeba castellanii str. Neff	14917921
ACA1_062240	mRNA	ACA1_062240	NW_004457442.1	1144610	1148344	R	ACA1_062240	complement(join(<1144610..1144845,1144952..1145053,1145147..1145209,1145286..1146006,1146110..1146213,1146290..1146392,1146485..1146521,1146630..1146763,1146839..1146968,1147059..1147146,1147234..1147344,1147437..1147599,1147913..1148011,1148138..>1148344))	Acanthamoeba castellanii str. Neff	14917922
ACA1_062250	mRNA	ACA1_062250	NW_004457442.1	1149300	1150813	R	ACA1_062250	complement(join(<1149300..1149887,1149954..1150181,1150292..1150343,1150492..1150594,1150747..>1150813))	Acanthamoeba castellanii str. Neff	14917923
ACA1_062260	mRNA	ACA1_062260	NW_004457442.1	1150971	1154293	D	ACA1_062260	join(<1150971..1151094,1151220..1151287,1151383..1151547,1151643..1151754,1151864..1152029,1152107..1152261,1152337..1152368,1152521..1152717,1152795..1152883,1152976..1153104,1153182..1153304,1153383..1153456,1153530..1153589,1153658..1153853,1153929..1154133,1154200..>1154293)	Acanthamoeba castellanii str. Neff	14917924
ACA1_062270	mRNA	ACA1_062270	NW_004457442.1	1154436	1156054	D	ACA1_062270	join(<1154436..1154596,1154677..1154763,1154869..1154933,1155025..1155121,1155213..1155289,1155410..1155548,1155628..1155658,1155734..1155826,1155965..>1156054)	Acanthamoeba castellanii str. Neff	14917925
ACA1_062280	mRNA	ACA1_062280	NW_004457442.1	1156161	1157838	R	ACA1_062280	complement(join(<1156161..1156358,1156429..1156541,1156642..1156724,1156818..1156890,1156987..1157078,1157186..1157267,1157395..1157467,1157728..>1157838))	Acanthamoeba castellanii str. Neff	14917926
ACA1_062290	mRNA	ACA1_062290	NW_004457442.1	1157991	1158867	D	ACA1_062290	join(<1157991..1158184,1158267..1158476,1158579..1158686,1158801..>1158867)	Acanthamoeba castellanii str. Neff	14917927
ACA1_062300	mRNA	ACA1_062300	NW_004457442.1	1158952	1159515	D	ACA1_062300	join(<1158952..1159040,1159110..1159305,1159399..1159418,1159485..>1159515)	Acanthamoeba castellanii str. Neff	14917928
ACA1_062310	mRNA	ACA1_062310	NW_004457442.1	1159795	1160869	D	ACA1_062310	join(<1159795..1159843,1159915..1159986,1160080..1160216,1160266..1160320,1160413..1160488,1160596..1160703,1160767..>1160869)	Acanthamoeba castellanii str. Neff	14917929
ACA1_062320	mRNA	ACA1_062320	NW_004457442.1	1161094	1164132	D	ACA1_062320	join(<1161094..1161802,1161833..1162146,1162203..1162750,1162827..1163084,1163196..1163552,1163638..1163821,1163895..1163982,1164065..>1164132)	Acanthamoeba castellanii str. Neff	14917930
ACA1_062330	mRNA	ACA1_062330	NW_004457442.1	1164502	1167390	D	ACA1_062330	join(<1164502..1165955,1166021..1166275,1166382..1166502,1166594..1166793,1166866..1167052,1167141..1167228,1167302..>1167390)	Acanthamoeba castellanii str. Neff	14917931
ACA1_062340	mRNA	ACA1_062340	NW_004457442.1	1167524	1168725	R	ACA1_062340	complement(join(<1167524..1167702,1167769..1167968,1168046..1168092,1168223..1168279,1168357..>1168725))	Acanthamoeba castellanii str. Neff	14917932
ACA1_062350	mRNA	ACA1_062350	NW_004457442.1	1168945	1169722	D	ACA1_062350	join(<1168945..1168959,1169053..1169155,1169225..1169339,1169435..1169576,1169651..>1169722)	Acanthamoeba castellanii str. Neff	14917933
ACA1_062360	mRNA	ACA1_062360	NW_004457442.1	1170006	1170931	R	ACA1_062360	complement(join(<1170006..1170437,1170743..>1170931))	Acanthamoeba castellanii str. Neff	14917934
ACA1_062370	mRNA	ACA1_062370	NW_004457442.1	1171675	1173794	R	ACA1_062370	complement(join(<1171675..1171836,1171961..1172047,1172255..1172364,1172865..1172942,1173036..1173114,1173223..1173334,1173399..1173480,1173581..1173721,1173791..>1173794))	Acanthamoeba castellanii str. Neff	14917935
ACA1_062380	mRNA	ACA1_062380	NW_004457442.1	1173916	1174878	R	ACA1_062380	complement(join(<1173916..1174359,1174430..1174547,1174640..>1174878))	Acanthamoeba castellanii str. Neff	14917936
ACA1_062400	mRNA	ACA1_062400	NW_004457442.1	1179547	1180113	D	ACA1_062400	<1179547..>1180113	Acanthamoeba castellanii str. Neff	14918050
ACA1_062410	mRNA	ACA1_062410	NW_004457442.1	1180349	1182892	R	ACA1_062410	complement(join(<1180349..1180401,1180477..1180607,1180692..1180752,1180821..1180894,1180970..1181112,1181215..1181302,1181376..1181480,1181617..1181660,1181698..1181770,1181876..1181923,1182002..1182246,1182335..1182457,1182536..1182653,1182723..>1182892))	Acanthamoeba castellanii str. Neff	14918051
ACA1_062420	mRNA	ACA1_062420	NW_004457442.1	1183217	1184143	R	ACA1_062420	complement(join(<1183217..1183681,1183727..>1184143))	Acanthamoeba castellanii str. Neff	14918052
ACA1_062430	mRNA	ACA1_062430	NW_004457442.1	1185125	1187285	R	ACA1_062430	complement(join(<1185125..1185256,1185343..1185392,1185468..1185515,1185581..1185648,1185721..1186474,1186550..1186621,1186686..1186791,1186883..1186941,1187029..1187120,1187197..>1187285))	Acanthamoeba castellanii str. Neff	14918053
ACA1_062440	mRNA	ACA1_062440	NW_004457442.1	1187470	1188333	D	ACA1_062440	join(<1187470..1187712,1187782..>1188333)	Acanthamoeba castellanii str. Neff	14918054
ACA1_062450	mRNA	ACA1_062450	NW_004457442.1	1188749	1191015	D	ACA1_062450	join(<1188749..1188856,1188898..1189350,1189434..1189554,1189641..1189944,1190009..1190079,1190161..1190305,1190373..1190447,1190519..1190711,1190968..>1191015)	Acanthamoeba castellanii str. Neff	14918055
ACA1_062460	mRNA	ACA1_062460	NW_004457442.1	1192400	1198964	D	ACA1_062460	join(<1192400..1192794,1192870..1192974,1193206..1193324,1193397..1193556,1193645..1194477,1194540..1194625,1194702..1195058,1195072..1195269,1195447..1195773,1195877..1195927,1196106..1196315,1196408..1196527,1196640..1196712,1196785..1197232,1197339..1197483,1197574..1197689,1197810..1197939,1198319..1198510,1198596..1198745,1198827..>1198964)	Acanthamoeba castellanii str. Neff	14918056
ACA1_062470	mRNA	ACA1_062470	NW_004457442.1	1199266	1201523	R	ACA1_062470	complement(join(<1199266..1199358,1199447..1199623,1199719..1199782,1199859..1200060,1200133..1200245,1200359..1200421,1200545..1200656,1200921..1201006,1201088..1201221,1201326..>1201523))	Acanthamoeba castellanii str. Neff	14918057
ACA1_062480	mRNA	ACA1_062480	NW_004457442.1	1201708	1204279	R	ACA1_062480	complement(join(<1201708..1201983,1202076..1202581,1202650..1202809,1202888..1203015,1203088..1203154,1203230..1203525,1203609..1203771,1203844..1203904,1203979..1204034,1204109..>1204279))	Acanthamoeba castellanii str. Neff	14918058
ACA1_062490	mRNA	ACA1_062490	NW_004457442.1	1204629	1205798	R	ACA1_062490	complement(join(<1204629..1204869,1204932..1205166,1205240..>1205798))	Acanthamoeba castellanii str. Neff	14918059
ACA1_062500	mRNA	ACA1_062500	NW_004457442.1	1206636	1207590	R	ACA1_062500	complement(join(<1206636..1206937,1207026..>1207590))	Acanthamoeba castellanii str. Neff	14918060
ACA1_062510	mRNA	ACA1_062510	NW_004457442.1	1208141	1209774	R	ACA1_062510	complement(join(<1208141..1208474,1208562..1208715,1208804..1209026,1209153..1209410,1209499..>1209774))	Acanthamoeba castellanii str. Neff	14918061
ACA1_062520	mRNA	ACA1_062520	NW_004457442.1	1210486	1211428	D	ACA1_062520	join(<1210486..1210617,1210817..>1211428)	Acanthamoeba castellanii str. Neff	14918062
ACA1_062530	mRNA	ACA1_062530	NW_004457442.1	1211608	1217814	R	ACA1_062530	complement(join(<1211608..1211771,1211869..1211941,1212020..1212176,1212291..1212358,1212435..1212638,1212728..1212788,1212883..1212987,1213083..1213168,1213291..1213659,1213755..1213876,1213989..1214142,1214269..1214466,1214630..1214793,1214873..1214988,1215065..1215185,1215254..1215480,1215573..1215714,1215795..1215965,1216038..1216254,1216303..1216424,1216505..1216714,1216796..1216898,1216992..1217123,1217190..1217474,1217527..>1217814))	Acanthamoeba castellanii str. Neff	14918063
ACA1_062550	mRNA	ACA1_062550	NW_004457442.1	1223197	1228720	D	ACA1_062550	join(<1223197..1223251,1223312..1224540,1224618..1224693,1224762..1224853,1224911..1224957,1225018..1225870,1225952..1226027,1226104..1226238,1226324..1226448,1226541..1226607,1226678..1227117,1227182..1227267,1227362..1227785,1227848..1227934,1228021..1228202,1228263..1228360,1228444..1228501,1228570..>1228720)	Acanthamoeba castellanii str. Neff	14918065
ACA1_062560	mRNA	ACA1_062560	NW_004457442.1	1229200	1231956	D	ACA1_062560	join(<1229200..1229241,1229547..1229732,1229801..1229970,1230033..1230172,1230236..1230333,1230434..1230509,1230600..1230720,1230801..1230885,1230957..1231206,1231278..1231696,1231798..>1231956)	Acanthamoeba castellanii str. Neff	14918066
ACA1_062570	mRNA	ACA1_062570	NW_004457442.1	1232875	1236913	R	ACA1_062570	complement(join(<1232875..1232946,1233018..1233135,1233226..1233374,1233458..1233532,1233632..1233801,1233902..1234209,1234457..1234490,1234529..1234721,1234774..1234919,1234989..1236015,1236089..1236193,1236301..1236425,1236511..>1236913))	Acanthamoeba castellanii str. Neff	14918067
ACA1_062580	mRNA	ACA1_062580	NW_004457442.1	1237238	1238569	R	ACA1_062580	complement(join(<1237238..1237304,1237368..1237456,1237529..1237672,1237748..1237853,1237927..1238000,1238036..1238158,1238217..1238303,1238384..1238448,1238521..>1238569))	Acanthamoeba castellanii str. Neff	14918068
ACA1_062590	mRNA	ACA1_062590	NW_004457442.1	1238911	1250925	D	ACA1_062590	join(<1238911..1239154,1239309..1239519,1239579..1239780,1239862..1239987,1240064..1240182,1240275..1240394,1240469..1240611,1240691..1240927,1240997..1241113,1241188..1241311,1241393..1241563,1241646..1242228,1242299..1242470,1242554..1242724,1242815..1242894,1242968..1243114,1243206..1243555,1243624..1243734,1243808..1243974,1244058..1244446,1244518..1244607,1244703..1244834,1244944..1245036,1245129..1245522,1245607..1245719,1245802..1246143,1246234..1246485,1246566..1246692,1246795..1246938,1247044..1247226,1247315..1247394,1247494..1247617,1247730..1247933,1247977..1248125,1248210..1248316,1248379..1248515,1248606..1248735,1248867..1249426,1249542..1249722,1249810..1250660,1250744..>1250925)	Acanthamoeba castellanii str. Neff	14918407
ACA1_062600	mRNA	ACA1_062600	NW_004457442.1	1251149	1251732	R	ACA1_062600	complement(join(<1251149..1251269,1251354..1251577,1251652..>1251732))	Acanthamoeba castellanii str. Neff	14918408
ACA1_062610	mRNA	ACA1_062610	NW_004457442.1	1252369	1253820	D	ACA1_062610	join(<1252369..1252426,1252527..1252633,1252691..1253200,1253266..>1253820)	Acanthamoeba castellanii str. Neff	14918409
ACA1_062620	mRNA	ACA1_062620	NW_004457442.1	1253870	1257322	R	ACA1_062620	complement(join(<1253870..1253888,1254110..1254308,1254395..1254533,1254625..1254723,1254808..1254906,1254982..1255130,1255212..1255896,1255951..1256640,1256722..1256850,1256861..1256904,1257015..1257143,1257211..>1257322))	Acanthamoeba castellanii str. Neff	14918410
ACA1_062630	mRNA	ACA1_062630	NW_004457442.1	1257391	1258166	R	ACA1_062630	complement(join(<1257391..1257477,1257697..1257819,1257938..1258021,1258095..>1258166))	Acanthamoeba castellanii str. Neff	14918411
ACA1_062640	mRNA	ACA1_062640	NW_004457442.1	1258604	1260302	R	ACA1_062640	complement(join(<1258604..1258713,1258811..1258867,1259026..1259112,1259196..1259363,1259552..>1260302))	Acanthamoeba castellanii str. Neff	14918412
ACA1_062650	mRNA	ACA1_062650	NW_004457442.1	1260890	1267598	D	ACA1_062650	join(<1260890..1261055,1261139..1261209,1261293..1261422,1261527..1261742,1261838..1262118,1262186..1262367,1262522..1262654,1262716..1262895,1262975..1263094,1263188..1263319,1263415..1263665,1263738..1263835,1263925..1263977,1264066..1264261,1264342..1264481,1264586..1264669,1264807..1264872,1264965..1265086,1265321..1265480,1265632..1265739,1265799..1265891,1266021..1266436,1266501..1266766,1266832..1267069,1267161..1267308,1267368..>1267598)	Acanthamoeba castellanii str. Neff	14918413
ACA1_062660	mRNA	ACA1_062660	NW_004457442.1	1267826	1268451	D	ACA1_062660	join(<1267826..1267911,1267974..1268216,1268388..>1268451)	Acanthamoeba castellanii str. Neff	14918414
ACA1_062670	mRNA	ACA1_062670	NW_004457442.1	1268661	1270724	R	ACA1_062670	complement(join(<1268661..1268724,1268828..1268954,1269045..1269217,1269305..1269381,1269490..1269621,1269736..1269911,1270049..1270113,1270229..1270313,1270403..>1270724))	Acanthamoeba castellanii str. Neff	14918415
ACA1_062680	mRNA	ACA1_062680	NW_004457442.1	1271161	1272863	D	ACA1_062680	join(<1271161..1271604,1271746..1271935,1272032..1272111,1272201..1272290,1272417..1272561,1272679..>1272863)	Acanthamoeba castellanii str. Neff	14918416
ACA1_062690	mRNA	ACA1_062690	NW_004457442.1	1273051	1276834	R	ACA1_062690	complement(join(<1273051..1273312,1273397..1273571,1273667..1273784,1273902..1274013,1274110..1274279,1274383..1274501,1274618..1275077,1275174..1275332,1275415..1275714,1275812..1276390,1276508..>1276834))	Acanthamoeba castellanii str. Neff	14918417
ACA1_062700	mRNA	ACA1_062700	NW_004457442.1	1276989	1277994	D	ACA1_062700	join(<1276989..1277101,1277165..1277253,1277320..1277431,1277504..1277606,1277668..1277743,1277861..>1277994)	Acanthamoeba castellanii str. Neff	14918418
ACA1_062710	mRNA	ACA1_062710	NW_004457442.1	1278822	1278937	D	ACA1_062710	<1278822..>1278937	Acanthamoeba castellanii str. Neff	14918419
ACA1_062820	mRNA	ACA1_062820	NW_004457442.1	1282714	1283877	D	ACA1_062820	<1282714..>1283877	Acanthamoeba castellanii str. Neff	14918420
ACA1_062830	mRNA	ACA1_062830	NW_004457442.1	1283955	1284715	R	ACA1_062830	complement(join(<1283955..1284053,1284210..1284326,1284413..>1284715))	Acanthamoeba castellanii str. Neff	14918421
ACA1_062840	mRNA	ACA1_062840	NW_004457442.1	1284750	1285177	R	ACA1_062840	complement(join(<1284750..1284845,1284938..>1285177))	Acanthamoeba castellanii str. Neff	14918422
ACA1_062850	mRNA	ACA1_062850	NW_004457442.1	1285371	1287596	D	ACA1_062850	join(<1285371..1285512,1285583..1285680,1285751..1285850,1285915..1286012,1286096..1286155,1286278..1286377,1286468..1286617,1286789..1286880,1286966..1287090,1287170..1287408,1287499..>1287596)	Acanthamoeba castellanii str. Neff	14918423
ACA1_062860	mRNA	ACA1_062860	NW_004457442.1	1287690	1295365	R	ACA1_062860	complement(join(<1287690..1287778,1287872..1288061,1288146..1288319,1288417..1288539,1288649..1288730,1288860..1288957,1289058..1289200,1289302..1289383,1289522..1289653,1289784..1289923,1290047..1290182,1290293..1290362,1290457..1290540,1290678..1290739,1290870..1290987,1291070..1291145,1291316..1291450,1291575..1291649,1291786..1291849,1291940..1292031,1292193..1292276,1292370..1292515,1292655..1292897,1293151..1293405,1293492..1293591,1293659..1293826,1293903..1294064,1294148..1294297,1294388..1294599,1294671..>1295365))	Acanthamoeba castellanii str. Neff	14918424
ACA1_062870	mRNA	ACA1_062870	NW_004457442.1	1295883	1297259	R	ACA1_062870	complement(<1295883..>1297259)	Acanthamoeba castellanii str. Neff	14918425
ACA1_062880	mRNA	ACA1_062880	NW_004457442.1	1297744	1300072	D	ACA1_062880	join(<1297744..1297823,1297890..1297979,1298072..1298156,1298235..1298291,1298353..1298429,1298520..1298634,1298757..1298833,1299092..1299258,1299351..1299475,1299555..1299652,1299736..1299820,1299902..>1300072)	Acanthamoeba castellanii str. Neff	14918242
ACA1_062890	mRNA	ACA1_062890	NW_004457442.1	1301275	1307377	D	ACA1_062890	join(<1301275..1302240,1302320..1303358,1303450..1304671,1304768..1305266,1305352..1305464,1305537..1305595,1305710..1305896,1306028..1306108,1306174..1306279,1306381..1306495,1306627..1306820,1306889..>1307377)	Acanthamoeba castellanii str. Neff	14918243
ACA1_062900	mRNA	ACA1_062900	NW_004457442.1	1308504	1310998	D	ACA1_062900	join(<1308504..1308608,1308668..1308751,1308816..1308875,1308947..1309015,1309028..1309092,1309160..1309239,1309330..1309416,1309527..1309657,1309740..1309908,1309969..1310073,1310165..1310283,1310385..1310460,1310566..1310703,1310808..>1310998)	Acanthamoeba castellanii str. Neff	14918244
ACA1_062910	mRNA	ACA1_062910	NW_004457442.1	1311082	1312111	D	ACA1_062910	join(<1311082..1311169,1311244..1311332,1311411..1311534,1311599..1311806,1311880..>1312111)	Acanthamoeba castellanii str. Neff	14918245
ACA1_062920	mRNA	ACA1_062920	NW_004457442.1	1312775	1314248	D	ACA1_062920	join(<1312775..1312788,1312896..1312968,1313107..1313206,1313443..1313461,1313536..1313616,1313745..1313841,1313939..1314000,1314155..>1314248)	Acanthamoeba castellanii str. Neff	14918246
ACA1_062930	mRNA	ACA1_062930	NW_004457442.1	1314409	1315416	R	ACA1_062930	complement(join(<1314409..1314496,1314589..1314637,1314752..1314870,1314987..1315085,1315166..>1315416))	Acanthamoeba castellanii str. Neff	14918247
ACA1_063040	mRNA	ACA1_063040	NW_004457442.1	1316214	1316851	R	ACA1_063040	complement(join(<1316214..1316335,1316566..>1316851))	Acanthamoeba castellanii str. Neff	14918248
ACA1_063050	mRNA	ACA1_063050	NW_004457442.1	1317465	1319245	D	ACA1_063050	join(<1317465..1317580,1317850..1318057,1318182..1318320,1318392..1318512,1318602..1318752,1318812..1318924,1319005..>1319245)	Acanthamoeba castellanii str. Neff	14918249
ACA1_063060	mRNA	ACA1_063060	NW_004457442.1	1319522	1320262	D	ACA1_063060	join(<1319522..1319726,1319838..>1320262)	Acanthamoeba castellanii str. Neff	14918250
ACA1_063070	mRNA	ACA1_063070	NW_004457442.1	1320836	1322082	D	ACA1_063070	join(<1320836..1320973,1321062..1321175,1321286..1321415,1321479..1321723,1321790..1321900,1321975..>1322082)	Acanthamoeba castellanii str. Neff	14918251
ACA1_063080	mRNA	ACA1_063080	NW_004457442.1	1322141	1322713	R	ACA1_063080	complement(join(<1322141..1322622,1322689..>1322713))	Acanthamoeba castellanii str. Neff	14918252
ACA1_063090	mRNA	ACA1_063090	NW_004457442.1	1323614	1326826	R	ACA1_063090	complement(join(<1323614..1323840,1323938..1324495,1324551..1324853,1325106..1325201,1325266..1325349,1325741..1325818,1325913..1325978,1326047..1326124,1326187..1326288,1326379..1326444,1326509..1326615,1326699..>1326826))	Acanthamoeba castellanii str. Neff	14918253
ACA1_063100	mRNA	ACA1_063100	NW_004457442.1	1327280	1330691	R	ACA1_063100	complement(join(<1327280..1327503,1327600..1328157,1328242..1328349,1328427..1328564,1328630..1328812,1328899..1328985,1329206..1329298,1329381..1329458,1329547..1329612,1329860..1329967,1330038..1330103,1330179..1330288,1330377..1330479,1330631..>1330691))	Acanthamoeba castellanii str. Neff	14918254
ACA1_063110	mRNA	ACA1_063110	NW_004457442.1	1331046	1333610	D	ACA1_063110	join(<1331046..1331050,1331194..1331307,1331441..1331567,1331683..1331788,1331891..1332018,1332092..1332263,1332442..1332640,1332711..1332837,1332920..1333066,1333143..1333280,1333428..>1333610)	Acanthamoeba castellanii str. Neff	14918255
ACA1_063120	mRNA	ACA1_063120	NW_004457442.1	1333869	1336529	R	ACA1_063120	complement(join(<1333869..1333968,1334047..1334104,1334191..1334323,1334413..1334503,1334597..1334778,1334897..1335045,1335186..1335303,1335410..1335605,1335677..1335784,1335852..1335971,1336118..1336239,1336371..>1336529))	Acanthamoeba castellanii str. Neff	14918256
ACA1_063130	mRNA	ACA1_063130	NW_004457442.1	1336762	1338668	R	ACA1_063130	complement(join(<1336762..1337535,1337641..1337744,1337815..1338091,1338149..1338294,1338380..1338512,1338621..>1338668))	Acanthamoeba castellanii str. Neff	14918257
ACA1_063140	mRNA	ACA1_063140	NW_004457442.1	1339158	1341308	R	ACA1_063140	complement(join(<1339158..1339479,1339562..1339661,1339737..1339842,1339946..1340047,1340270..1340374,1340468..1340544,1340630..1340684,1340790..1340886,1340950..1341052,1341141..1341210,1341285..>1341308))	Acanthamoeba castellanii str. Neff	14918258
ACA1_063150	mRNA	ACA1_063150	NW_004457442.1	1341639	1344229	R	ACA1_063150	complement(join(<1341639..1341951,1342019..1342118,1342201..1342306,1342400..1342501,1342591..1342647,1342743..1342847,1342933..1343009,1343097..1343151,1343222..1343351,1343431..1343533,1343614..1343683,1343755..1343865,1344044..>1344229))	Acanthamoeba castellanii str. Neff	14918259
ACA1_063160	mRNA	ACA1_063160	NW_004457442.1	1345145	1346501	R	ACA1_063160	complement(join(<1345145..1346224,1346451..>1346501))	Acanthamoeba castellanii str. Neff	14918260
ACA1_063170	mRNA	ACA1_063170	NW_004457442.1	1347822	1348780	R	ACA1_063170	complement(join(<1347822..1347974,1348095..1348217,1348329..1348430,1348494..1348565,1348631..>1348780))	Acanthamoeba castellanii str. Neff	14917896
ACA1_063180	mRNA	ACA1_063180	NW_004457442.1	1348995	1349757	D	ACA1_063180	join(<1348995..1349086,1349187..1349257,1349300..1349484,1349590..>1349757)	Acanthamoeba castellanii str. Neff	14917897
ACA1_063190	mRNA	ACA1_063190	NW_004457442.1	1349944	1351252	R	ACA1_063190	complement(join(<1349944..1350080,1350157..1350226,1350339..1350417,1350493..1350554,1350652..1350745,1350899..1350998,1351177..>1351252))	Acanthamoeba castellanii str. Neff	14917898
ACA1_063200	mRNA	ACA1_063200	NW_004457442.1	1351715	1352755	D	ACA1_063200	<1351715..>1352755	Acanthamoeba castellanii str. Neff	14917899
ACA1_063210	mRNA	ACA1_063210	NW_004457442.1	1352869	1358588	R	ACA1_063210	complement(join(<1352869..1353683,1353741..1354066,1354149..1354225,1354304..1354669,1355001..1355138,1355227..1355403,1355501..1355658,1355737..1355839,1355911..1356033,1356110..1356231,1356326..1356400,1356463..1356556,1356889..1356978,1357146..1357571,1357687..1357868,1357946..>1358588))	Acanthamoeba castellanii str. Neff	14917900
ACA1_063220	mRNA	ACA1_063220	NW_004457442.1	1358863	1361521	D	ACA1_063220	join(<1358863..1359092,1359169..1359267,1359364..1359461,1359557..1359710,1359903..1359937,1360023..1360115,1360190..1360287,1360376..1360536,1360618..1360891,1360979..1361034,1361101..1361197,1361342..>1361521)	Acanthamoeba castellanii str. Neff	14917901
ACA1_063230	mRNA	ACA1_063230	NW_004457442.1	1361608	1362587	R	ACA1_063230	complement(join(<1361608..1361746,1361841..1361945,1362040..1362150,1362243..1362338,1362436..>1362587))	Acanthamoeba castellanii str. Neff	14917902
ACA1_063240	mRNA	ACA1_063240	NW_004457442.1	1363075	1364752	R	ACA1_063240	complement(join(<1363075..1363428,1363504..1363585,1363652..1363768,1363824..1363939,1363995..1364264,1364339..1364404,1364475..1364638,1364704..>1364752))	Acanthamoeba castellanii str. Neff	14917903
ACA1_063250	mRNA	ACA1_063250	NW_004457442.1	1365076	1365904	R	ACA1_063250	complement(join(<1365076..1365496,1365636..>1365904))	Acanthamoeba castellanii str. Neff	14917904
ACA1_063260	mRNA	ACA1_063260	NW_004457442.1	1365834	1369639	D	ACA1_063260	join(<1365834..1365890,1366042..1366140,1366171..1366227,1366308..1366381,1366475..1366552,1366649..1366781,1366852..1366938,1367040..1367573,1367669..1367748,1367859..1367950,1368040..1368594,1368690..1368778,1368860..1368904,1368989..1369087,1369156..1369245,1369305..1369387,1369453..>1369639)	Acanthamoeba castellanii str. Neff	14917906
ACA1_063270	mRNA	ACA1_063270	NW_004457442.1	1369962	1371035	D	ACA1_063270	join(<1369962..1370034,1370155..1370220,1370285..1370781,1370871..>1371035)	Acanthamoeba castellanii str. Neff	14917905
ACA1_063280	mRNA	ACA1_063280	NW_004457442.1	1371237	1372123	R	ACA1_063280	complement(join(<1371237..1371695,1371747..1371853,1371942..1372008,1372097..>1372123))	Acanthamoeba castellanii str. Neff	14917907
ACA1_063290	mRNA	ACA1_063290	NW_004457442.1	1372317	1373703	R	ACA1_063290	complement(join(<1372317..1372534,1372629..>1373703))	Acanthamoeba castellanii str. Neff	14917908
ACA1_063300	mRNA	ACA1_063300	NW_004457442.1	1373923	1378666	R	ACA1_063300	complement(join(<1373923..1374006,1374088..1374215,1374296..1374387,1374479..1374659,1374742..1374834,1374893..1374959,1375079..1375148,1375246..1375374,1375475..1375533,1375622..1375702,1375806..1375878,1376101..1376241,1376331..1376418,1376515..1376582,1376662..1376737,1376802..1376853,1376921..1377010,1377082..1377149,1377226..1377304,1377376..1377523,1377607..1377784,1377849..1377890,1377979..>1378666))	Acanthamoeba castellanii str. Neff	14917909
ACA1_063310	mRNA	ACA1_063310	NW_004457442.1	1379546	1380835	D	ACA1_063310	join(<1379546..1379713,1379777..1379832,1379915..1380019,1380343..1380387,1380453..1380624,1380773..>1380835)	Acanthamoeba castellanii str. Neff	14917910
ACA1_063320	mRNA	ACA1_063320	NW_004457442.1	1381139	1382710	D	ACA1_063320	join(<1381139..1382398,1382477..>1382710)	Acanthamoeba castellanii str. Neff	14917911
ACA1_063330	mRNA	ACA1_063330	NW_004457442.1	1382898	1388276	R	ACA1_063330	complement(join(<1382898..1383002,1383077..1383197,1383449..1383509,1383806..1383888,1383969..1384038,1384115..1384225,1384307..1384440,1384519..1384601,1384676..1384768,1384803..1384865,1385121..1385265,1385330..1385379,1385445..1385550,1385644..1385735,1385833..1385917,1385998..1386032,1386111..1386196,1386291..1386455,1386541..1386691,1386769..1386827,1386932..1387062,1387146..1387272,1387347..1387443,1387530..1387626,1387711..1387820,1387907..1388058,1388156..>1388276))	Acanthamoeba castellanii str. Neff	14917912
ACA1_063340	mRNA	ACA1_063340	NW_004457442.1	1388893	1392427	D	ACA1_063340	join(<1388893..1389009,1389175..1389289,1389424..1389593,1389693..1389873,1389964..1390035,1390126..1390282,1390360..1390414,1390583..1390711,1390798..1390889,1390972..1391167,1391250..1391374,1391479..1391623,1391772..1391830,1391909..1391990,1392051..1392176,1392314..>1392427)	Acanthamoeba castellanii str. Neff	14917913
ACA1_063350	mRNA	ACA1_063350	NW_004457442.1	1392712	1392984	D	ACA1_063350	<1392712..>1392984	Acanthamoeba castellanii str. Neff	14917914
ACA1_063360	mRNA	ACA1_063360	NW_004457442.1	1393565	1394068	D	ACA1_063360	<1393565..>1394068	Acanthamoeba castellanii str. Neff	14918283
ACA1_063370	mRNA	ACA1_063370	NW_004457442.1	1394348	1394833	D	ACA1_063370	<1394348..>1394833	Acanthamoeba castellanii str. Neff	14918284
ACA1_063380	mRNA	ACA1_063380	NW_004457442.1	1395357	1398701	R	ACA1_063380	complement(<1395357..>1398701)	Acanthamoeba castellanii str. Neff	14918285
ACA1_063390	mRNA	ACA1_063390	NW_004457442.1	1399093	1399732	D	ACA1_063390	join(<1399093..1399113,1399333..1399540,1399623..>1399732)	Acanthamoeba castellanii str. Neff	14918286
ACA1_063400	mRNA	ACA1_063400	NW_004457442.1	1400070	1400944	D	ACA1_063400	join(<1400070..1400390,1400531..1400743,1400822..>1400944)	Acanthamoeba castellanii str. Neff	14918287
ACA1_063410	mRNA	ACA1_063410	NW_004457442.1	1401132	1402811	R	ACA1_063410	complement(<1401132..>1402811)	Acanthamoeba castellanii str. Neff	14918288
ACA1_063420	mRNA	ACA1_063420	NW_004457442.1	1403207	1405562	R	ACA1_063420	complement(join(<1403207..1403262,1403342..1403456,1403555..1403617,1403694..1403776,1403856..1403931,1404031..1404134,1404232..1404335,1404425..1404531,1404630..1404737,1404828..1404939,1405028..1405168,1405263..1405458,1405544..>1405562))	Acanthamoeba castellanii str. Neff	14918289
ACA1_063430	mRNA	ACA1_063430	NW_004457442.1	1405714	1408361	D	ACA1_063430	join(<1405714..1405764,1406282..1406491,1406630..1406803,1406918..1407025,1407097..1407303,1407370..1407772,1407869..1408009,1408075..>1408361)	Acanthamoeba castellanii str. Neff	14918290
ACA1_063440	mRNA	ACA1_063440	NW_004457442.1	1409058	1411310	D	ACA1_063440	join(<1409058..1409600,1409657..1410250,1410314..1410763,1410780..>1411310)	Acanthamoeba castellanii str. Neff	14918291
ACA1_063450	mRNA	ACA1_063450	NW_004457442.1	1411530	1412984	R	ACA1_063450	complement(join(<1411530..1412132,1412238..1412438,1412521..1412632,1412712..1412911,1412976..>1412984))	Acanthamoeba castellanii str. Neff	14918292
ACA1_063460	mRNA	ACA1_063460	NW_004457442.1	1413669	1415782	R	ACA1_063460	complement(join(<1413669..1413890,1413969..1414064,1414134..1414231,1414297..1414375,1414434..1414542,1414606..1414742,1414849..1414956,1415041..1415404,1415463..>1415782))	Acanthamoeba castellanii str. Neff	14918293
ACA1_063470	mRNA	ACA1_063470	NW_004457442.1	1415924	1426838	R	ACA1_063470	complement(join(<1415924..1416019,1416108..1416325,1416410..1416515,1416746..1416877,1416967..1417067,1417132..1417245,1417323..1417449,1417526..1418041,1418142..1418428,1418522..1418609,1418692..1418834,1418918..1418984,1419109..1419182,1419276..1419746,1419821..1419956,1420014..1420161,1420228..1420372,1420486..1420617,1420732..1420871,1420941..1421023,1421116..1421328,1421395..1421792,1421858..1421965,1422106..1422170,1422234..1422359,1422437..1422800,1422891..1422925,1422996..1423266,1423328..1423765,1423950..1424093,1424142..1424273,1424347..1424427,1424502..1424574,1424701..1424936,1425103..1425426,1425486..1425682,1425775..1425947,1426012..1426154,1426229..1426609,1426694..>1426838))	Acanthamoeba castellanii str. Neff	14918294
ACA1_063480	mRNA	ACA1_063480	NW_004457442.1	1427118	1429327	D	ACA1_063480	join(<1427118..1427196,1427330..1427343,1427354..1427449,1427804..1428369,1428433..1428544,1428630..1428833,1428947..>1429327)	Acanthamoeba castellanii str. Neff	14918295
ACA1_063490	mRNA	ACA1_063490	NW_004457442.1	1429405	1431767	R	ACA1_063490	complement(join(<1429405..1429650,1429748..1429894,1429975..1430088,1430158..1430336,1430539..1430821,1430893..1431266,1431528..1431556,1431640..>1431767))	Acanthamoeba castellanii str. Neff	14918296
ACA1_063500	mRNA	ACA1_063500	NW_004457442.1	1432069	1435544	D	ACA1_063500	join(<1432069..1432222,1432321..1432406,1432485..1432628,1432740..1432881,1432974..1433105,1433209..1433323,1433416..1433650,1433743..1433930,1434036..1434109,1434179..1434270,1434359..1434437,1434533..1434592,1434678..1434781,1434862..1435268,1435409..>1435544)	Acanthamoeba castellanii str. Neff	14918297
ACA1_063510	mRNA	ACA1_063510	NW_004457442.1	1435706	1441425	R	ACA1_063510	complement(join(<1435706..1435786,1435867..1436070,1436176..1436283,1436352..1436955,1437046..1437250,1437318..1437731,1437856..1437973,1438046..1438319,1438447..1438576,1438660..1438804,1438926..1439104,1439183..1439312,1439395..1439650,1439855..1439903,1439993..1440110,1440214..1440383,1440491..1440746,1440931..1441022,1441123..1441230,1441404..>1441425))	Acanthamoeba castellanii str. Neff	14918298
ACA1_063520	mRNA	ACA1_063520	NW_004457442.1	1441724	1443270	R	ACA1_063520	complement(join(<1441724..1442603,1442679..1443203,1443257..>1443270))	Acanthamoeba castellanii str. Neff	14918299
ACA1_063530	mRNA	ACA1_063530	NW_004457442.1	1444146	1446174	D	ACA1_063530	join(<1444146..1444288,1444418..1444617,1444717..1445010,1445086..1445156,1445234..1445455,1445549..1445678,1445760..1445944,1446019..>1446174)	Acanthamoeba castellanii str. Neff	14918300
ACA1_063540	mRNA	ACA1_063540	NW_004457442.1	1446418	1447679	D	ACA1_063540	join(<1446418..1446534,1446605..1446742,1446809..1446998,1447083..1447429,1447542..>1447679)	Acanthamoeba castellanii str. Neff	14918301
ACA1_063550	mRNA	ACA1_063550	NW_004457442.1	1447925	1448823	R	ACA1_063550	complement(join(<1447925..1447951,1448195..1448414,1448544..1448570,1448669..>1448823))	Acanthamoeba castellanii str. Neff	14918302
ACA1_063560	mRNA	ACA1_063560	NW_004457442.1	1448992	1450383	D	ACA1_063560	join(<1448992..1449108,1449243..1449380,1449473..1449613,1449717..1449774,1449837..1450132,1450213..>1450383)	Acanthamoeba castellanii str. Neff	14917796
ACA1_063570	mRNA	ACA1_063570	NW_004457442.1	1450876	1452586	D	ACA1_063570	join(<1450876..1451075,1451155..1451464,1451504..>1452586)	Acanthamoeba castellanii str. Neff	14917797
ACA1_063580	mRNA	ACA1_063580	NW_004457442.1	1452780	1453952	D	ACA1_063580	join(<1452780..1452878,1452962..1453099,1453169..1453309,1453373..1453430,1453535..1453682,1453871..>1453952)	Acanthamoeba castellanii str. Neff	14917798
ACA1_063590	mRNA	ACA1_063590	NW_004457442.1	1454387	1457726	D	ACA1_063590	join(<1454387..1455779,1455869..1456007,1456082..1456184,1456281..1456531,1456618..1456711,1456794..1456874,1456965..1457134,1457206..1457286,1457356..1457455,1457571..>1457726)	Acanthamoeba castellanii str. Neff	14917799
ACA1_063600	mRNA	ACA1_063600	NW_004457442.1	1457849	1459151	R	ACA1_063600	complement(join(<1457849..1457937,1458009..1458125,1458215..1458284,1458381..>1459151))	Acanthamoeba castellanii str. Neff	14917800
ACA1_063610	mRNA	ACA1_063610	NW_004457442.1	1459351	1460038	R	ACA1_063610	complement(join(<1459351..1459509,1459571..1459658,1459742..1459832,1459966..>1460038))	Acanthamoeba castellanii str. Neff	14917801
ACA1_063620	mRNA	ACA1_063620	NW_004457442.1	1460483	1463449	R	ACA1_063620	complement(join(<1460483..1461012,1461076..1461387,1461482..1461893,1461988..1462059,1462313..1462375,1462520..1462782,1462873..1463003,1463064..1463218,1463306..>1463449))	Acanthamoeba castellanii str. Neff	14917802
ACA1_063630	mRNA	ACA1_063630	NW_004457442.1	1463736	1464146	R	ACA1_063630	complement(join(<1463736..1463812,1463873..>1464146))	Acanthamoeba castellanii str. Neff	14917803
ACA1_063640	mRNA	ACA1_063640	NW_004457442.1	1464559	1466019	D	ACA1_063640	join(<1464559..1464686,1464777..1464885,1464978..1465091,1465192..1465259,1465341..1465377,1465457..1465717,1465819..>1466019)	Acanthamoeba castellanii str. Neff	14917804
ACA1_063650	mRNA	ACA1_063650	NW_004457442.1	1466088	1466534	R	ACA1_063650	complement(join(<1466088..1466340,1466425..>1466534))	Acanthamoeba castellanii str. Neff	14917805
ACA1_063660	mRNA	ACA1_063660	NW_004457442.1	1466976	1468283	D	ACA1_063660	join(<1466976..1467933,1468120..>1468283)	Acanthamoeba castellanii str. Neff	14917806
ACA1_063670	mRNA	ACA1_063670	NW_004457442.1	1468363	1470170	D	ACA1_063670	join(<1468363..1468506,1468660..1468792,1468890..1468935,1469039..1469133,1469194..1469276,1469447..1469629,1469711..1469855,1469937..1470034,1470117..>1470170)	Acanthamoeba castellanii str. Neff	14917807
ACA1_063680	mRNA	ACA1_063680	NW_004457442.1	1470615	1474548	D	ACA1_063680	join(<1470615..1474529,1474540..>1474548)	Acanthamoeba castellanii str. Neff	14917808
ACA1_063690	mRNA	ACA1_063690	NW_004457442.1	1475096	1476976	R	ACA1_063690	complement(join(<1475096..1475674,1475730..1476053,1476158..>1476976))	Acanthamoeba castellanii str. Neff	14917809
ACA1_063700	mRNA	ACA1_063700	NW_004457442.1	1477275	1478189	R	ACA1_063700	complement(join(<1477275..1477396,1477505..1477716,1477784..1477961,1478027..>1478189))	Acanthamoeba castellanii str. Neff	14917810
ACA1_063710	mRNA	ACA1_063710	NW_004457442.1	1478564	1479022	D	ACA1_063710	<1478564..>1479022	Acanthamoeba castellanii str. Neff	14917811
ACA1_063720	mRNA	ACA1_063720	NW_004457442.1	1479995	1487561	R	ACA1_063720	complement(join(<1479995..1480348,1480417..1480723,1480798..1480994,1481084..1481397,1481478..1481665,1481732..1482630,1482726..1482947,1483076..1483262,1483342..1483678,1483768..1483893,1483976..1484192,1484266..1484354,1484434..1485163,1485249..1485922,1485997..1486183,1486307..1486447,1486523..1486666,1486797..1487082,1487223..1487281,1487421..>1487561))	Acanthamoeba castellanii str. Neff	14917812
ACA1_063730	mRNA	ACA1_063730	NW_004457442.1	1487730	1491959	R	ACA1_063730	complement(join(<1487730..1487933,1488015..1488058,1488135..1488288,1488366..1488428,1488505..1488626,1488695..1488837,1488913..1488968,1489050..1489173,1489242..1489368,1489431..1489479,1489572..1489662,1489741..1489880,1489966..1490056,1490129..1490231,1490315..1490528,1490598..1490786,1490874..1491155,1491237..1491361,1491430..1491612,1491675..1491776,1491869..>1491959))	Acanthamoeba castellanii str. Neff	14917813
ACA1_063740	mRNA	ACA1_063740	NW_004457442.1	1492174	1494231	R	ACA1_063740	complement(join(<1492174..1492463,1492534..1492697,1492780..1492988,1493076..1493148,1493226..1493458,1493554..1493619,1493686..1493710,1493800..1493873,1494034..>1494231))	Acanthamoeba castellanii str. Neff	14917814
ACA1_063750	mRNA	ACA1_063750	NW_004457442.1	1495157	1496607	D	ACA1_063750	join(<1495157..1495335,1495373..1495603,1495667..1495816,1495888..1496034,1496107..1496312,1496395..1496469,1496537..>1496607)	Acanthamoeba castellanii str. Neff	14917815
ACA1_063760	mRNA	ACA1_063760	NW_004457442.1	1496673	1497587	D	ACA1_063760	join(<1496673..1496768,1496977..1497103,1497187..1497266,1497381..>1497587)	Acanthamoeba castellanii str. Neff	14917816
ACA1_063770	mRNA	ACA1_063770	NW_004457442.1	1497713	1498548	D	ACA1_063770	join(<1497713..1497962,1498121..>1498548)	Acanthamoeba castellanii str. Neff	14917817
ACA1_063780	mRNA	ACA1_063780	NW_004457442.1	1499366	1503738	D	ACA1_063780	join(<1499366..1499462,1499823..1499992,1500071..1500472,1500569..1500678,1500778..1501041,1501132..1501252,1501974..1502114,1502216..1502310,1502403..>1503738)	Acanthamoeba castellanii str. Neff	14917937
ACA1_063790	mRNA	ACA1_063790	NW_004457442.1	1504199	1505519	R	ACA1_063790	complement(join(<1504199..1504328,1504393..1504530,1504637..1504745,1504847..>1505519))	Acanthamoeba castellanii str. Neff	14917938
ACA1_063800	mRNA	ACA1_063800	NW_004457442.1	1505883	1509025	R	ACA1_063800	complement(join(<1505883..1505946,1506037..1506142,1506203..1506266,1506368..1506441,1506525..1506577,1506665..1506741,1506871..1506948,1507075..1507134,1507220..1507318,1507420..1507911,1507986..1508227,1508344..1508475,1508650..>1509025))	Acanthamoeba castellanii str. Neff	14917939
ACA1_063810	mRNA	ACA1_063810	NW_004457442.1	1509229	1510757	D	ACA1_063810	join(<1509229..1509489,1509576..1509733,1509995..1510076,1510163..1510224,1510315..1510423,1510533..>1510757)	Acanthamoeba castellanii str. Neff	14917940
ACA1_063820	mRNA	ACA1_063820	NW_004457442.1	1511349	1514123	D	ACA1_063820	join(<1511349..1511721,1511852..1511949,1512030..1512107,1512180..1512263,1512387..1512590,1512670..1512786,1512883..1513006,1513084..1513178,1513272..1513374,1513491..1513607,1513702..1513884,1513930..>1514123)	Acanthamoeba castellanii str. Neff	14917941
ACA1_063830	mRNA	ACA1_063830	NW_004457442.1	1514303	1515588	D	ACA1_063830	join(<1514303..1514474,1514603..1514650,1514756..1514803,1514924..1515023,1515090..1515478,1515548..>1515588)	Acanthamoeba castellanii str. Neff	14917942
ACA1_063840	mRNA	ACA1_063840	NW_004457442.1	1515864	1516851	R	ACA1_063840	complement(join(<1515864..1516535,1516558..>1516851))	Acanthamoeba castellanii str. Neff	14917943
ACA1_063850	mRNA	ACA1_063850	NW_004457442.1	1518365	1519033	D	ACA1_063850	join(<1518365..1518421,1518492..1518615,1518699..1518839,1518906..>1519033)	Acanthamoeba castellanii str. Neff	14917944
ACA1_063860	mRNA	ACA1_063860	NW_004457442.1	1519116	1519875	R	ACA1_063860	complement(join(<1519116..1519308,1519512..1519646,1519739..>1519875))	Acanthamoeba castellanii str. Neff	14917945
ACA1_063870	mRNA	ACA1_063870	NW_004457442.1	1521238	1522661	D	ACA1_063870	join(<1521238..1521312,1521454..1522068,1522159..1522320,1522440..>1522661)	Acanthamoeba castellanii str. Neff	14917946
ACA1_063880	mRNA	ACA1_063880	NW_004457442.1	1523251	1525193	R	ACA1_063880	complement(join(<1523251..1523366,1523443..1523598,1523660..1523765,1523913..1524052,1524126..1524234,1524315..1524435,1524615..1524703,1524783..1524913,1524992..>1525193))	Acanthamoeba castellanii str. Neff	14917947
ACA1_063890	mRNA	ACA1_063890	NW_004457442.1	1526076	1527877	D	ACA1_063890	join(<1526076..1526169,1526289..1526488,1526661..1526744,1526815..1526970,1527059..1527245,1527338..1527483,1527539..>1527877)	Acanthamoeba castellanii str. Neff	14917948
ACA1_063900	mRNA	ACA1_063900	NW_004457442.1	1528162	1534055	D	ACA1_063900	join(<1528162..1528284,1528375..1528461,1528529..1528696,1528787..1528962,1529040..1529154,1529251..1529479,1529554..1529777,1529818..1529988,1530059..1530163,1530236..1530337,1530412..1530623,1530696..1530785,1530864..1530991,1531056..1531149,1531215..1531344,1531452..1531661,1531732..1531845,1531925..1532019,1532105..1532306,1532395..1532564,1532644..1532823,1532901..1533042,1533124..1533302,1533373..1533532,1533620..1533816,1533896..>1534055)	Acanthamoeba castellanii str. Neff	14917949
ACA1_063910	mRNA	ACA1_063910	NW_004457442.1	1534572	1535830	D	ACA1_063910	join(<1534572..1534599,1534663..1534801,1534885..1535012,1535092..1535236,1535330..1535400,1535496..>1535830)	Acanthamoeba castellanii str. Neff	14917950
ACA1_063920	mRNA	ACA1_063920	NW_004457442.1	1536068	1537260	R	ACA1_063920	complement(join(<1536068..1536283,1536367..1536485,1536595..1536936,1537011..>1537260))	Acanthamoeba castellanii str. Neff	14917951
ACA1_063930	mRNA	ACA1_063930	NW_004457442.1	1537357	1539026	R	ACA1_063930	complement(join(<1537357..1537653,1537743..1537883,1537990..1538163,1538202..1538248,1538321..1538536,1538553..1538616,1538721..1538918,1538958..>1539026))	Acanthamoeba castellanii str. Neff	14917952
ACA1_063940	mRNA	ACA1_063940	NW_004457442.1	1539190	1540117	D	ACA1_063940	join(<1539190..1539855,1539989..>1540117)	Acanthamoeba castellanii str. Neff	14917953
ACA1_063950	mRNA	ACA1_063950	NW_004457442.1	1540705	1543841	D	ACA1_063950	join(<1540705..1540789,1541012..1541316,1541410..1541499,1541559..1541715,1541872..1542021,1542099..1542302,1542377..1542474,1542548..1542618,1542715..1542815,1542907..1543017,1543097..1543209,1543299..1543449,1543521..1543637,1543750..>1543841)	Acanthamoeba castellanii str. Neff	14917954
ACA1_063960	mRNA	ACA1_063960	NW_004457442.1	1543990	1544819	D	ACA1_063960	join(<1543990..1544482,1544563..>1544819)	Acanthamoeba castellanii str. Neff	14917955
ACA1_063970	mRNA	ACA1_063970	NW_004457442.1	1545014	1548900	R	ACA1_063970	complement(join(<1545014..1545324,1545431..1545592,1545627..1545776,1546006..1546083,1546172..1546255,1546352..1546447,1546547..1546696,1547106..1547310,1547405..1547514,1548358..1548446,1548535..1548647,1548753..1548849,1548887..>1548900))	Acanthamoeba castellanii str. Neff	14917956
ACA1_064180	mRNA	ACA1_064180	NW_004457442.1	1550165	1550886	D	ACA1_064180	join(<1550165..1550221,1550304..1550438,1550501..1550532,1550660..1550755,1550832..>1550886)	Acanthamoeba castellanii str. Neff	14917957
ACA1_064190	mRNA	ACA1_064190	NW_004457442.1	1551390	1553708	D	ACA1_064190	join(<1551390..1551603,1551876..1551938,1552025..1552152,1552246..1552317,1552411..1552554,1552641..1552826,1552907..1553016,1553087..1553501,1553595..>1553708)	Acanthamoeba castellanii str. Neff	14918303
ACA1_064200	mRNA	ACA1_064200	NW_004457442.1	1554229	1557738	D	ACA1_064200	join(<1554229..1554253,1554537..1554601,1554705..1554774,1554863..1554913,1555014..1555075,1555163..1555201,1555293..1555347,1555463..1555540,1555668..1555738,1555845..1555862,1555940..1555975,1556059..1556135,1556209..1556262,1556372..1556406,1556507..1556600,1556703..1556774,1556868..1556922,1557000..1557050,1557133..1557234,1557325..1557395,1557473..1557573,1557656..>1557738)	Acanthamoeba castellanii str. Neff	14918304
ACA1_064210	mRNA	ACA1_064210	NW_004457442.1	1557908	1561197	D	ACA1_064210	join(<1557908..1558036,1558164..1558216,1558292..1558392,1558488..1558599,1558647..1558748,1558843..1558926,1558998..1559257,1559345..1559436,1559587..1559640,1559747..1559811,1559924..1559999,1560082..1560237,1560327..1560434,1560518..1560661,1560744..1560974,1561057..>1561197)	Acanthamoeba castellanii str. Neff	14918305
ACA1_064220	mRNA	ACA1_064220	NW_004457442.1	1561330	1562659	D	ACA1_064220	join(<1561330..1561551,1561632..1561814,1561875..1562389,1562509..>1562659)	Acanthamoeba castellanii str. Neff	14918306
ACA1_064230	mRNA	ACA1_064230	NW_004457442.1	1563000	1565202	R	ACA1_064230	complement(join(<1563000..1563047,1563259..1563369,1563572..1563697,1563841..1563948,1564022..1564101,1564205..1564333,1564414..1564663,1564722..1564880,1564979..1565075,1565147..>1565202))	Acanthamoeba castellanii str. Neff	14918307
ACA1_064240	mRNA	ACA1_064240	NW_004457442.1	1565303	1567235	D	ACA1_064240	join(<1565303..1565362,1565432..1565564,1565665..1565797,1565893..1566001,1566070..1566159,1566224..1566300,1566369..1566459,1566551..1566634,1566720..1566850,1566931..1567024,1567107..>1567235)	Acanthamoeba castellanii str. Neff	14918308
ACA1_064250	mRNA	ACA1_064250	NW_004457442.1	1567389	1572278	D	ACA1_064250	join(<1567389..1567449,1567511..1567722,1567799..1567883,1568013..1568124,1568196..1568318,1568401..1568689,1568777..1569006,1569083..1569157,1569277..1569399,1569508..1569738,1569819..1569897,1569959..1570056,1570134..1570362,1570452..1570570,1570642..1570974,1571059..1571167,1571252..1571431,1571522..1571720,1571791..1571945,1572031..1572108,1572231..>1572278)	Acanthamoeba castellanii str. Neff	14918309
ACA1_064260	mRNA	ACA1_064260	NW_004457442.1	1572405	1573286	R	ACA1_064260	complement(join(<1572405..1572520,1572605..1572711,1572797..1572969,1573042..1573148,1573232..>1573286))	Acanthamoeba castellanii str. Neff	14918310
ACA1_064270	mRNA	ACA1_064270	NW_004457442.1	1573986	1574901	R	ACA1_064270	complement(join(<1573986..1574123,1574232..1574314,1574434..1574526,1574595..1574669,1574769..>1574901))	Acanthamoeba castellanii str. Neff	14918311
ACA1_064280	mRNA	ACA1_064280	NW_004457442.1	1575187	1575749	D	ACA1_064280	join(<1575187..1575314,1575401..>1575749)	Acanthamoeba castellanii str. Neff	14918312
ACA1_064290	mRNA	ACA1_064290	NW_004457442.1	1575912	1580100	R	ACA1_064290	complement(join(<1575912..1576110,1576189..1576373,1576457..1576678,1576736..1576868,1576942..1577046,1577166..1577264,1577318..1577562,1577652..1577765,1577838..1577953,1578002..1578140,1578195..1578375,1578455..1578510,1578604..1578643,1578784..1579082,1579161..1579335,1579430..1579555,1579666..1579811,1579880..1579969,1580029..>1580100))	Acanthamoeba castellanii str. Neff	14918313
ACA1_064310	mRNA	ACA1_064310	NW_004457442.1	1582565	1584596	R	ACA1_064310	complement(join(<1582565..1582642,1582722..1582839,1582933..1582967,1583029..1583195,1583290..1583470,1583553..1583635,1583730..1583872,1583994..1584081,1584188..1584317,1584534..>1584596))	Acanthamoeba castellanii str. Neff	14918315
ACA1_064320	mRNA	ACA1_064320	NW_004457442.1	1584759	1587251	D	ACA1_064320	join(<1584759..1584882,1585076..1585151,1585314..1585391,1585493..1585599,1585782..1585932,1586038..1586155,1586318..1586616,1586702..1586805,1586898..1587009,1587110..>1587251)	Acanthamoeba castellanii str. Neff	14918316
ACA1_064330	mRNA	ACA1_064330	NW_004457442.1	1587285	1592686	R	ACA1_064330	complement(join(<1587285..1587565,1587679..1588041,1588170..1588358,1588443..1588565,1588640..1588927,1588992..1589120,1589194..1589298,1589366..1589425,1589543..1589782,1589867..1589974,1590096..1590245,1590356..1590467,1590555..1590647,1590746..1590813,1590917..1590950,1591056..1591149,1591224..1591405,1591546..1591643,1591716..1591926,1592002..1592097,1592202..1592275,1592358..1592458,1592553..>1592686))	Acanthamoeba castellanii str. Neff	14918317
ACA1_064340	mRNA	ACA1_064340	NW_004457442.1	1592925	1597093	R	ACA1_064340	complement(join(<1592925..1594023,1594086..1594245,1594316..1594485,1594569..1594623,1594694..1594821,1594906..1595089,1595152..1595512,1595599..1595684,1595769..1595826,1595931..1595998,1596079..1596360,1596429..1596492,1596573..1596668,1596750..1596853,1596967..>1597093))	Acanthamoeba castellanii str. Neff	14918318
ACA1_064350	mRNA	ACA1_064350	NW_004457442.1	1597751	1602270	R	ACA1_064350	complement(join(<1597751..1598536,1598592..1599221,1599298..1599382,1599462..1599534,1599635..1599789,1599838..1599976,1600057..1600230,1600311..1600425,1600506..1600919,1600946..1601110,1601170..1601364,1601461..1601574,1601685..1601764,1601835..1601903,1602072..>1602270))	Acanthamoeba castellanii str. Neff	14918319
ACA1_064360	mRNA	ACA1_064360	NW_004457442.1	1602821	1605696	D	ACA1_064360	join(<1602821..1602972,1603062..1603149,1603239..1603462,1603564..1603736,1603831..1604114,1604174..1604317,1604409..1604575,1604668..1604795,1604873..1605198,1605266..1605408,1605494..1605551,1605610..>1605696)	Acanthamoeba castellanii str. Neff	14918491
ACA1_064370	mRNA	ACA1_064370	NW_004457442.1	1606370	1607218	D	ACA1_064370	join(<1606370..1606522,1606581..1606804,1606868..1607057,1607124..>1607218)	Acanthamoeba castellanii str. Neff	14918492
ACA1_064380	mRNA	ACA1_064380	NW_004457442.1	1607289	1608260	D	ACA1_064380	<1607289..>1608260	Acanthamoeba castellanii str. Neff	14918493
ACA1_064400	mRNA	ACA1_064400	NW_004457442.1	1612519	1613938	R	ACA1_064400	complement(join(<1612519..1613130,1613211..1613381,1613498..>1613938))	Acanthamoeba castellanii str. Neff	14918495
ACA1_064410	mRNA	ACA1_064410	NW_004457442.1	1614336	1615761	R	ACA1_064410	complement(join(<1614336..1614887,1614992..1615122,1615242..1615344,1615527..1615579,1615692..>1615761))	Acanthamoeba castellanii str. Neff	14918496
ACA1_064420	mRNA	ACA1_064420	NW_004457442.1	1616079	1617421	D	ACA1_064420	join(<1616079..1616127,1616259..1616307,1616399..1616484,1616648..1616769,1616933..1617056,1617141..1617256,1617365..>1617421)	Acanthamoeba castellanii str. Neff	14918497
ACA1_064430	mRNA	ACA1_064430	NW_004457442.1	1617721	1618508	D	ACA1_064430	join(<1617721..1618145,1618233..1618356,1618461..>1618508)	Acanthamoeba castellanii str. Neff	14918498
ACA1_064440	mRNA	ACA1_064440	NW_004457442.1	1618809	1623131	R	ACA1_064440	complement(join(<1618809..1619591,1619652..1619794,1619916..1620038,1620293..1620440,1620541..1621047,1621128..1621305,1621411..1621534,1621628..1621711,1621814..1621973,1622056..1622156,1622286..1622420,1622613..1622816,1622885..>1623131))	Acanthamoeba castellanii str. Neff	14918499
ACA1_064450	mRNA	ACA1_064450	NW_004457442.1	1623488	1623819	D	ACA1_064450	join(<1623488..1623543,1623612..>1623819)	Acanthamoeba castellanii str. Neff	14918500
ACA1_064460	mRNA	ACA1_064460	NW_004457442.1	1624109	1625482	R	ACA1_064460	complement(<1624109..>1625482)	Acanthamoeba castellanii str. Neff	14918501
ACA1_064480	mRNA	ACA1_064480	NW_004457442.1	1626680	1627123	D	ACA1_064480	join(<1626680..1626722,1626810..1626946,1627016..>1627123)	Acanthamoeba castellanii str. Neff	14918503
ACA1_064490	mRNA	ACA1_064490	NW_004457442.1	1627522	1628525	D	ACA1_064490	join(<1627522..1627528,1627593..1627688,1627765..1627904,1628017..1628105,1628175..1628218,1628297..1628383,1628452..>1628525)	Acanthamoeba castellanii str. Neff	14918504
ACA1_064500	mRNA	ACA1_064500	NW_004457442.1	1628748	1629246	R	ACA1_064500	complement(join(<1628748..1628756,1628848..1629029,1629126..>1629246))	Acanthamoeba castellanii str. Neff	14918505
ACA1_064510	mRNA	ACA1_064510	NW_004457442.1	1629495	1630889	R	ACA1_064510	complement(join(<1629495..1629686,1629787..1629940,1630011..1630081,1630168..1630314,1630461..1630538,1630611..1630654,1630754..>1630889))	Acanthamoeba castellanii str. Neff	14918506
ACA1_064520	mRNA	ACA1_064520	NW_004457442.1	1631071	1635050	R	ACA1_064520	complement(join(<1631071..1631208,1631337..1631404,1631484..1631572,1631650..1631730,1631831..1631898,1632074..1632443,1632525..1632645,1632720..1632957,1633050..1633107,1633210..1633313,1633397..1633568,1633659..1633830,1633941..1633984,1634060..1634131,1634248..1634381,1634572..1634633,1634675..>1635050))	Acanthamoeba castellanii str. Neff	14918507
ACA1_064530	mRNA	ACA1_064530	NW_004457442.1	1635181	1637257	D	ACA1_064530	join(<1635181..1635285,1635414..1635443,1635724..1635933,1635986..1636100,1636185..1636286,1636368..1636540,1636615..1636683,1636775..1636869,1636961..1637062,1637146..>1637257)	Acanthamoeba castellanii str. Neff	14918508
ACA1_064540	mRNA	ACA1_064540	NW_004457442.1	1637343	1639305	R	ACA1_064540	complement(join(<1637343..1637914,1638019..1638097,1638241..1638347,1638483..>1639305))	Acanthamoeba castellanii str. Neff	14918509
ACA1_064550	mRNA	ACA1_064550	NW_004457442.1	1639490	1641868	R	ACA1_064550	complement(join(<1639490..1639549,1639622..1639689,1639780..1639853,1639951..1640072,1640166..1640354,1640420..1640538,1640689..1640903,1640993..1641466,1641556..1641690,1641798..>1641868))	Acanthamoeba castellanii str. Neff	14918510
ACA1_064560	mRNA	ACA1_064560	NW_004457442.1	1642421	1644292	D	ACA1_064560	<1642421..>1644292	Acanthamoeba castellanii str. Neff	14918511
ACA1_064570	mRNA	ACA1_064570	NW_004457442.1	1644446	1647240	D	ACA1_064570	join(<1644446..1645234,1645355..1645492,1645561..1645623,1645711..1645850,1645939..1646047,1646102..1646422,1646505..1646653,1646731..1646942,1647017..>1647240)	Acanthamoeba castellanii str. Neff	14918512
ACA1_064580	mRNA	ACA1_064580	NW_004457442.1	1647344	1648947	R	ACA1_064580	complement(join(<1647344..1647407,1647527..1647661,1647775..1647856,1647933..1648001,1648156..1648303,1648372..1648461,1648560..1648723,1648806..>1648947))	Acanthamoeba castellanii str. Neff	14918513
ACA1_064590	mRNA	ACA1_064590	NW_004457442.1	1650194	1650991	D	ACA1_064590	<1650194..>1650991	Acanthamoeba castellanii str. Neff	14918182
ACA1_064600	mRNA	ACA1_064600	NW_004457442.1	1651251	1652137	R	ACA1_064600	complement(join(<1651251..1651652,1651767..1651925,1652021..>1652137))	Acanthamoeba castellanii str. Neff	14918183
ACA1_064610	mRNA	ACA1_064610	NW_004457442.1	1652257	1655257	R	ACA1_064610	complement(join(<1652257..1654408,1654523..1654633,1654719..1654782,1654918..>1655257))	Acanthamoeba castellanii str. Neff	14918184
ACA1_064620	mRNA	ACA1_064620	NW_004457442.1	1655847	1661570	R	ACA1_064620	complement(join(<1655847..1656003,1656094..1656185,1656272..1656388,1656465..1656551,1656641..1656765,1656872..1656960,1657068..1657177,1657261..1657956,1658048..1658113,1658237..1658323,1658432..1658566,1658701..1658906,1659007..1659160,1659230..1659271,1659351..1659456,1659636..1659690,1659771..1659910,1659982..1660062,1660135..1660196,1660319..1660406,1660512..1660621,1660739..1660783,1660873..1660971,1661101..1661208,1661346..>1661570))	Acanthamoeba castellanii str. Neff	14918185
ACA1_064630	mRNA	ACA1_064630	NW_004457442.1	1661847	1662292	D	ACA1_064630	join(<1661847..1661970,1662123..>1662292)	Acanthamoeba castellanii str. Neff	14918186
ACA1_064640	mRNA	ACA1_064640	NW_004457442.1	1662463	1664101	R	ACA1_064640	complement(join(<1662463..1662549,1662673..1662892,1663006..1663102,1663231..1663332,1663425..1663501,1663565..1663669,1663771..1663880,1664045..>1664101))	Acanthamoeba castellanii str. Neff	14918187
ACA1_064650	mRNA	ACA1_064650	NW_004457442.1	1664269	1664862	R	ACA1_064650	complement(join(<1664269..1664521,1664801..>1664862))	Acanthamoeba castellanii str. Neff	14918188
ACA1_064660	mRNA	ACA1_064660	NW_004457442.1	1665107	1666452	R	ACA1_064660	complement(join(<1665107..1665219,1665313..1665382,1665456..1665571,1665665..1665790,1665899..1665960,1666055..1666161,1666276..>1666452))	Acanthamoeba castellanii str. Neff	14918189
ACA1_064670	mRNA	ACA1_064670	NW_004457442.1	1666840	1667554	D	ACA1_064670	join(<1666840..1667305,1667436..>1667554)	Acanthamoeba castellanii str. Neff	14918190
ACA1_064680	mRNA	ACA1_064680	NW_004457442.1	1667712	1669863	R	ACA1_064680	complement(join(<1667712..1668012,1668095..>1669863))	Acanthamoeba castellanii str. Neff	14918191
ACA1_064690	mRNA	ACA1_064690	NW_004457442.1	1670939	1673429	R	ACA1_064690	complement(join(<1670939..1671030,1671177..1671407,1671478..1671670,1671758..1672057,1672158..1672208,1672292..1672436,1672512..1672672,1672748..1672837,1672911..1673005,1673107..1673196,1673280..1673348,1673384..>1673429))	Acanthamoeba castellanii str. Neff	14918192
ACA1_064700	mRNA	ACA1_064700	NW_004457442.1	1673714	1676200	R	ACA1_064700	complement(join(<1673714..1673966,1674093..1674262,1674364..1674466,1674677..1674857,1674929..1675211,1675310..1675614,1675728..1676000,1676176..>1676200))	Acanthamoeba castellanii str. Neff	14918193
ACA1_064710	mRNA	ACA1_064710	NW_004457442.1	1676392	1677173	R	ACA1_064710	complement(join(<1676392..1676510,1676572..1676650,1676714..1676771,1676858..1676902,1676977..>1677173))	Acanthamoeba castellanii str. Neff	14918194
ACA1_064720	mRNA	ACA1_064720	NW_004457442.1	1677374	1678233	R	ACA1_064720	complement(join(<1677374..1677654,1677729..1677782,1677870..1677945,1678052..1678132,1678198..>1678233))	Acanthamoeba castellanii str. Neff	14918195
ACA1_064730	mRNA	ACA1_064730	NW_004457442.1	1679566	1683349	D	ACA1_064730	join(<1679566..1680447,1680518..1680634,1680719..1680862,1681021..1681197,1681281..1681400,1681507..1681594,1681688..1681858,1682004..1682063,1682147..1682440,1682520..1682584,1682673..1682971,1683065..1683194,1683290..>1683349)	Acanthamoeba castellanii str. Neff	14918196
ACA1_064740	mRNA	ACA1_064740	NW_004457442.1	1684177	1684879	R	ACA1_064740	complement(join(<1684177..1684543,1684629..>1684879))	Acanthamoeba castellanii str. Neff	14918197
ACA1_064750	mRNA	ACA1_064750	NW_004457442.1	1685446	1686713	R	ACA1_064750	complement(join(<1685446..1685508,1685650..1685792,1685961..1686088,1686169..>1686713))	Acanthamoeba castellanii str. Neff	14918198
ACA1_064760	mRNA	ACA1_064760	NW_004457442.1	1687051	1687598	R	ACA1_064760	complement(join(<1687051..1687193,1687313..1687350,1687486..>1687598))	Acanthamoeba castellanii str. Neff	14918199
ACA1_064770	mRNA	ACA1_064770	NW_004457442.1	1689604	1691233	R	ACA1_064770	complement(join(<1689604..1689998,1690674..1690820,1690925..1691048,1691120..>1691233))	Acanthamoeba castellanii str. Neff	14918200
ACA1_064780	mRNA	ACA1_064780	NW_004457442.1	1691772	1692092	D	ACA1_064780	<1691772..>1692092	Acanthamoeba castellanii str. Neff	14918201
ACA1_064790	mRNA	ACA1_064790	NW_004457442.1	1694620	1694969	D	ACA1_064790	join(<1694620..1694639,1694786..>1694969)	Acanthamoeba castellanii str. Neff	14918202
ACA1_064800	mRNA	ACA1_064800	NW_004457442.1	1695678	1702674	R	ACA1_064800	complement(join(<1695678..1696399,1696479..1697054,1697115..1697377,1697457..1698494,1698570..1698769,1698785..1699009,1699080..1699196,1699269..1699528,1699612..1699856,1699902..1700082,1700164..1700302,1700373..1700516,1700576..1700889,1700988..1701340,1701433..1701746,1701844..1702155,1702229..1702366,1702445..1702529,1702589..>1702674))	Acanthamoeba castellanii str. Neff	14918203
ACA1_064810	mRNA	ACA1_064810	NW_004457442.1	1703608	1705916	R	ACA1_064810	complement(join(<1703608..1703861,1703982..1704086,1704148..1704201,1704284..1704388,1704470..1704648,1704719..1704788,1705022..1705187,1705220..1705367,1705475..1705544,1705629..1705676,1705748..1705832,1705890..>1705916))	Acanthamoeba castellanii str. Neff	14917776
ACA1_064820	mRNA	ACA1_064820	NW_004457442.1	1706754	1707344	R	ACA1_064820	complement(<1706754..>1707344)	Acanthamoeba castellanii str. Neff	14917777
ACA1_064830	mRNA	ACA1_064830	NW_004457442.1	1707844	1709724	R	ACA1_064830	complement(join(<1707844..1708045,1708155..1708915,1708931..1709090,1709224..1709337,1709417..>1709724))	Acanthamoeba castellanii str. Neff	14917778
ACA1_064840	mRNA	ACA1_064840	NW_004457442.1	1710034	1712431	R	ACA1_064840	complement(join(<1710034..1710084,1710161..1710241,1710344..1710470,1710528..1710605,1710675..1710777,1710845..1710926,1711007..1711090,1711168..1711225,1711307..1711398,1711472..1711761,1711828..1711945,1712040..1712127,1712199..1712296,1712387..>1712431))	Acanthamoeba castellanii str. Neff	14917779
ACA1_064850	mRNA	ACA1_064850	NW_004457442.1	1712838	1713988	R	ACA1_064850	complement(join(<1712838..1713025,1713092..1713576,1713702..>1713988))	Acanthamoeba castellanii str. Neff	14917780
ACA1_064860	mRNA	ACA1_064860	NW_004457442.1	1714314	1715237	D	ACA1_064860	join(<1714314..1714476,1714574..1714844,1714937..>1715237)	Acanthamoeba castellanii str. Neff	14917781
ACA1_064870	mRNA	ACA1_064870	NW_004457442.1	1715978	1716421	R	ACA1_064870	complement(join(<1715978..1716055,1716152..1716198,1716274..>1716421))	Acanthamoeba castellanii str. Neff	14917782
ACA1_064880	mRNA	ACA1_064880	NW_004457442.1	1716727	1717159	D	ACA1_064880	join(<1716727..1716854,1716937..1716964,1717061..>1717159)	Acanthamoeba castellanii str. Neff	14917783
ACA1_064890	mRNA	ACA1_064890	NW_004457442.1	1717956	1719686	D	ACA1_064890	<1717956..>1719686	Acanthamoeba castellanii str. Neff	14917784
ACA1_064900	mRNA	ACA1_064900	NW_004457442.1	1720101	1720784	R	ACA1_064900	complement(join(<1720101..1720186,1720264..1720381,1720467..1720582,1720670..>1720784))	Acanthamoeba castellanii str. Neff	14917785
ACA1_064910	mRNA	ACA1_064910	NW_004457442.1	1720815	1722178	R	ACA1_064910	complement(join(<1720815..1720908,1721021..1721094,1721176..1721261,1721368..1721446,1721534..1721643,1721810..1721898,1721970..1722018,1722088..>1722178))	Acanthamoeba castellanii str. Neff	14917786
ACA1_064920	mRNA	ACA1_064920	NW_004457442.1	1722478	1724773	D	ACA1_064920	join(<1722478..1722609,1722817..1722929,1723019..1723106,1723206..1723316,1723408..1723527,1723634..1723726,1723805..1723878,1723964..1724103,1724243..1724360,1724441..1724558,1724651..>1724773)	Acanthamoeba castellanii str. Neff	14917787
ACA1_064930	mRNA	ACA1_064930	NW_004457442.1	1725629	1728812	R	ACA1_064930	complement(join(<1725629..1726058,1726270..1726492,1726562..1726613,1726710..1726931,1727013..1727454,1727563..1727666,1727769..1727935,1728013..1728169,1728261..1728397,1728454..1728492,1728692..>1728812))	Acanthamoeba castellanii str. Neff	14917788
ACA1_064940	mRNA	ACA1_064940	NW_004457442.1	1728906	1729741	D	ACA1_064940	join(<1728906..1729023,1729098..1729330,1729420..1729568,1729675..>1729741)	Acanthamoeba castellanii str. Neff	14917789
ACA1_064950	mRNA	ACA1_064950	NW_004457442.1	1730033	1731337	D	ACA1_064950	join(<1730033..1730203,1730279..1730321,1730397..1730683,1730906..>1731337)	Acanthamoeba castellanii str. Neff	14917790
ACA1_064960	mRNA	ACA1_064960	NW_004457442.1	1731563	1733849	D	ACA1_064960	join(<1731563..1731659,1731750..1731852,1731959..1732047,1732115..1732184,1732283..1732385,1732469..1732601,1732690..1732842,1732931..1733053,1733178..1733339,1733411..1733559,1733643..>1733849)	Acanthamoeba castellanii str. Neff	14917791
ACA1_064970	mRNA	ACA1_064970	NW_004457442.1	1733935	1734448	R	ACA1_064970	complement(join(<1733935..1734284,1734313..>1734448))	Acanthamoeba castellanii str. Neff	14917792
ACA1_064980	mRNA	ACA1_064980	NW_004457442.1	1734698	1744722	R	ACA1_064980	complement(join(<1734698..1734820,1734921..1735047,1735150..1735246,1735344..1735554,1735647..1735778,1735860..1735946,1736068..1736229,1736318..1736437,1736511..1736713,1736838..1737194,1737264..1737432,1737514..1737678,1737794..1737931,1738028..1738216,1738305..1738415,1738489..1738623,1738732..1738935,1739030..1739086,1739261..1739509,1739591..1739673,1739794..1739941,1740016..1740128,1740229..1740444,1740517..1740614,1740786..1741015,1741084..1741239,1741332..1741433,1741519..1741664,1741777..1741917,1742027..1742125,1742205..1742470,1742581..1742966,1743065..1743168,1743210..1743291,1743375..1743497,1743577..1743691,1743791..1743904,1743997..1744130,1744210..1744419,1744540..>1744722))	Acanthamoeba castellanii str. Neff	14917793
ACA1_064990	mRNA	ACA1_064990	NW_004457442.1	1745522	1747886	D	ACA1_064990	join(<1745522..1745699,1745797..1745894,1745985..1746126,1746210..1746311,1746391..1746486,1746678..1746733,1746805..1747484,1747522..1747676,1747744..>1747886)	Acanthamoeba castellanii str. Neff	14917794
ACA1_065000	mRNA	ACA1_065000	NW_004457442.1	1748312	1750653	D	ACA1_065000	join(<1748312..1748392,1748505..1749033,1749132..1749287,1749370..1749515,1749611..1749708,1749783..>1750653)	Acanthamoeba castellanii str. Neff	14917795
ACA1_065010	mRNA	ACA1_065010	NW_004457442.1	1751648	1752991	D	ACA1_065010	join(<1751648..1751723,1751842..1752439,1752564..1752755,1752817..>1752991)	Acanthamoeba castellanii str. Neff	14918388
ACA1_065020	mRNA	ACA1_065020	NW_004457442.1	1753889	1755922	R	ACA1_065020	complement(join(<1753889..1753933,1753950..1753982,1754060..1754309,1754396..1755421,1755499..1755690,1755867..>1755922))	Acanthamoeba castellanii str. Neff	14918389
ACA1_065030	mRNA	ACA1_065030	NW_004457442.1	1756596	1757358	D	ACA1_065030	join(<1756596..1756782,1756859..>1757358)	Acanthamoeba castellanii str. Neff	14918390
ACA1_065040	mRNA	ACA1_065040	NW_004457442.1	1757536	1760771	R	ACA1_065040	complement(join(<1757536..1757855,1757939..1758083,1758213..1758395,1758538..1758677,1758748..1758823,1759023..1759273,1759392..1759545,1759657..1759755,1759834..1759975,1760087..1760160,1760268..1760325,1760431..1760566,1760711..>1760771))	Acanthamoeba castellanii str. Neff	14918391
ACA1_065060	mRNA	ACA1_065060	NW_004457442.1	1763827	1765686	R	ACA1_065060	complement(join(<1763827..1764218,1764308..1764411,1764494..1764672,1764758..1764820,1764999..1765214,1765289..1765384,1765477..>1765686))	Acanthamoeba castellanii str. Neff	14918393
ACA1_065070	mRNA	ACA1_065070	NW_004457442.1	1765770	1774508	R	ACA1_065070	complement(join(<1765770..1765898,1766012..1766090,1766169..1766258,1766342..1766436,1766536..1766652,1766721..1766838,1766919..1767016,1767097..1767320,1767399..1767467,1767541..1767654,1767729..1767884,1767957..1768068,1768141..1768232,1768313..1768412,1768527..1768727,1768805..1768912,1768956..1769025,1769105..1769223,1769298..1769579,1769671..1769808,1769870..1770010,1770082..1770163,1770249..1770330,1770425..1770509,1770574..1770682,1770718..1770885,1770968..1771105,1771170..1771276,1771352..1771522,1771596..1771705,1771792..1771911,1772013..1772108,1772179..1772253,1772334..1772457,1772536..1772657,1772771..1772825,1772925..1773064,1773153..1773296,1773364..1773584,1773669..1773754,1773831..>1774508))	Acanthamoeba castellanii str. Neff	14918394
ACA1_065080	mRNA	ACA1_065080	NW_004457442.1	1774547	1776826	R	ACA1_065080	complement(join(<1774547..1776050,1776175..1776316,1776345..1776475,1776557..1776638,1776748..>1776826))	Acanthamoeba castellanii str. Neff	14918395
ACA1_065090	mRNA	ACA1_065090	NW_004457442.1	1777398	1783090	D	ACA1_065090	join(<1777398..1777536,1777616..1777687,1777761..1777820,1777898..1777999,1778101..1778180,1778269..1778365,1778444..1778613,1778708..1780276,1780333..1780428,1780495..1780646,1780720..1780878,1780954..1781098,1781160..1781316,1781384..1781479,1781538..1782307,1782392..1782476,1782553..1782692,1782770..>1783090)	Acanthamoeba castellanii str. Neff	14918396
ACA1_065100	mRNA	ACA1_065100	NW_004457442.1	1784441	1786228	D	ACA1_065100	join(<1784441..1784721,1785132..1785207,1785312..1785399,1785507..1785649,1785725..1785879,1785964..1786029,1786114..>1786228)	Acanthamoeba castellanii str. Neff	14918397
ACA1_065110	mRNA	ACA1_065110	NW_004457442.1	1786675	1790229	D	ACA1_065110	join(<1786675..1786742,1786804..1786916,1786980..1787176,1787296..1787426,1787518..1787689,1787792..1788053,1788164..1788235,1788444..1788531,1788624..1788805,1788927..1789046,1789134..1789186,1789269..1789353,1789454..1789585,1789676..1789871,1789964..1790067,1790144..>1790229)	Acanthamoeba castellanii str. Neff	14918398
ACA1_065120	mRNA	ACA1_065120	NW_004457442.1	1790421	1791217	D	ACA1_065120	join(<1790421..1790545,1790779..1790963,1791063..>1791217)	Acanthamoeba castellanii str. Neff	14918399
ACA1_065130	mRNA	ACA1_065130	NW_004457442.1	1791698	1794427	D	ACA1_065130	join(<1791698..1791792,1791961..1792076,1792172..1792350,1792410..1792582,1792657..1792797,1792877..1793055,1793130..1793231,1793331..1793419,1793504..1793607,1793673..1793791,1793890..1794371,1794419..>1794427)	Acanthamoeba castellanii str. Neff	14918400
ACA1_065140	mRNA	ACA1_065140	NW_004457442.1	1794691	1797049	R	ACA1_065140	complement(join(<1794691..1794800,1794902..1794985,1795066..1795140,1795238..1795309,1795404..1795557,1795726..1795924,1796007..1796084,1796209..1796282,1796388..1796456,1796546..1796643,1796722..1796812,1796939..>1797049))	Acanthamoeba castellanii str. Neff	14918401
ACA1_065150	mRNA	ACA1_065150	NW_004457442.1	1797173	1798250	R	ACA1_065150	complement(join(<1797173..1797365,1797606..1797713,1797785..1797879,1797992..1798064,1798135..>1798250))	Acanthamoeba castellanii str. Neff	14918402
ACA1_065160	mRNA	ACA1_065160	NW_004457442.1	1798920	1802442	D	ACA1_065160	join(<1798920..1798924,1798939..1799030,1799129..1799251,1799328..1799441,1799507..1799641,1799710..1799955,1800027..1800149,1800221..1800662,1800768..1801033,1801177..1801308,1801383..1801541,1801621..1801770,1801860..1802009,1802087..>1802442)	Acanthamoeba castellanii str. Neff	14918403
ACA1_065180	mRNA	ACA1_065180	NW_004457442.1	1807100	1810066	D	ACA1_065180	join(<1807100..1807534,1807633..1808019,1808086..1808214,1808297..1808394,1808476..1808622,1808684..1808785,1808859..1809008,1809072..1809580,1809690..>1810066)	Acanthamoeba castellanii str. Neff	14918405
ACA1_065190	mRNA	ACA1_065190	NW_004457442.1	1809745	1813482	R	ACA1_065190	complement(join(<1809745..1810034,1810246..1810301,1810365..1810463,1810577..1810775,1810884..1810939,1811048..1811319,1811394..1811441,1811584..1811641,1811730..1811810,1811899..1811953,1812104..1812251,1812336..1812472,1812581..1812945,1813029..1813141,1813215..1813313,1813402..>1813482))	Acanthamoeba castellanii str. Neff	14918406
ACA1_065200	mRNA	ACA1_065200	NW_004457442.1	1814139	1814690	D	ACA1_065200	join(<1814139..1814213,1814247..>1814690)	Acanthamoeba castellanii str. Neff	14918138
ACA1_065210	mRNA	ACA1_065210	NW_004457442.1	1814945	1816784	D	ACA1_065210	join(<1814945..1815106,1815195..1815279,1815356..1815514,1815586..1815722,1815797..1815858,1815939..1816072,1816139..1816194,1816253..1816441,1816518..1816570,1816658..>1816784)	Acanthamoeba castellanii str. Neff	14918139
ACA1_065220	mRNA	ACA1_065220	NW_004457442.1	1817090	1825037	D	ACA1_065220	join(<1817090..1817222,1817264..1817288,1817300..1817536,1817608..1817686,1817747..1817861,1817945..1818129,1818229..1818438,1818527..1818632,1818757..1818866,1818941..1819052,1819202..1819337,1819478..1819951,1820050..1820516,1820600..1820932,1821041..1821129,1821279..1821505,1821728..1821857,1821950..1822095,1822208..1822535,1822624..1822691,1822800..1822881,1822999..1823079,1823191..1823939,1824028..1824088,1824369..>1825037)	Acanthamoeba castellanii str. Neff	14918140
ACA1_065230	mRNA	ACA1_065230	NW_004457442.1	1825101	1830570	R	ACA1_065230	complement(join(<1825101..1825223,1825310..1825427,1825552..1825720,1825809..1825930,1826043..1826122,1826249..1826348,1826454..1826518,1826635..1826891,1826972..1827080,1827204..1827314,1827537..1827613,1827708..1827836,1827915..1828037,1828136..1828318,1828390..1828837,1828928..1829013,1829114..1829279,1829368..1829496,1829688..1829809,1829930..1830020,1830087..1830126,1830269..>1830570))	Acanthamoeba castellanii str. Neff	14918141
ACA1_065240	mRNA	ACA1_065240	NW_004457442.1	1831502	1832108	D	ACA1_065240	join(<1831502..1831566,1831687..1831760,1831859..1831965,1832043..>1832108)	Acanthamoeba castellanii str. Neff	14918142
ACA1_065250	mRNA	ACA1_065250	NW_004457442.1	1832392	1832927	R	ACA1_065250	complement(join(<1832392..1832582,1832660..>1832927))	Acanthamoeba castellanii str. Neff	14918143
ACA1_065260	mRNA	ACA1_065260	NW_004457442.1	1833202	1834951	D	ACA1_065260	join(<1833202..1833226,1833306..1833410,1833791..1833870,1833968..1834045,1834122..1834210,1834281..1834475,1834579..1834787,1834872..>1834951)	Acanthamoeba castellanii str. Neff	14918144
ACA1_065270	mRNA	ACA1_065270	NW_004457442.1	1835063	1841158	D	ACA1_065270	join(<1835063..1835156,1835271..1835406,1835501..1835572,1835652..1835883,1835995..1836480,1836563..1836722,1836804..1836883,1837007..1837121,1837193..1837307,1837383..1837581,1837649..1837808,1837880..1838068,1838142..1838299,1838372..1838615,1838752..1838852,1838950..1839053,1839145..1839266,1839346..1839516,1839590..1839686,1839938..1840055,1840175..1840369,1840400..1840455,1840533..1840678,1840752..1840905,1840999..>1841158)	Acanthamoeba castellanii str. Neff	14918145
ACA1_065280	mRNA	ACA1_065280	NW_004457442.1	1841513	1842649	D	ACA1_065280	join(<1841513..1842027,1842325..>1842649)	Acanthamoeba castellanii str. Neff	14918146
ACA1_065290	mRNA	ACA1_065290	NW_004457442.1	1842811	1843350	R	ACA1_065290	complement(join(<1842811..1842940,1843007..>1843350))	Acanthamoeba castellanii str. Neff	14918147
ACA1_065400	mRNA	ACA1_065400	NW_004457442.1	1844932	1845968	R	ACA1_065400	complement(join(<1844932..1845241,1845403..1845732,1845811..>1845968))	Acanthamoeba castellanii str. Neff	14918148
ACA1_065410	mRNA	ACA1_065410	NW_004457442.1	1846795	1848047	D	ACA1_065410	join(<1846795..1846817,1847038..1847479,1847517..1847588,1847685..>1848047)	Acanthamoeba castellanii str. Neff	14918149
ACA1_065420	mRNA	ACA1_065420	NW_004457442.1	1848993	1849363	D	ACA1_065420	join(<1848993..1849278,1849305..>1849363)	Acanthamoeba castellanii str. Neff	14918150
ACA1_065430	mRNA	ACA1_065430	NW_004457442.1	1850795	1851394	D	ACA1_065430	join(<1850795..1850863,1851005..>1851394)	Acanthamoeba castellanii str. Neff	14918151
ACA1_065440	mRNA	ACA1_065440	NW_004457442.1	1852046	1852678	D	ACA1_065440	join(<1852046..1852081,1852127..>1852678)	Acanthamoeba castellanii str. Neff	14918152
ACA1_065450	mRNA	ACA1_065450	NW_004457442.1	1853268	1858172	R	ACA1_065450	complement(join(<1853268..1853683,1853762..1854001,1854067..1854162,1854228..1854417,1854463..1854586,1854661..1854726,1854801..1854901,1855044..1855162,1855248..1855330,1855396..1855516,1855591..1855695,1855770..1855835,1855918..1856131,1856219..1856385,1856458..1856637,1856726..1856798,1856869..1856985,1857068..1857169,1857226..1857470,1857559..1857717,1857791..>1858172))	Acanthamoeba castellanii str. Neff	14918153
ACA1_065460	mRNA	ACA1_065460	NW_004457442.1	1858580	1863269	R	ACA1_065460	complement(join(<1858580..1858681,1858757..1858850,1858949..1859119,1859197..1859341,1859422..1860443,1860582..1860738,1860817..1860882,1861028..1861165,1861230..1861307,1861384..1861479,1861549..1861771,1861864..1861974,1862055..1862147,1862233..1862304,1862369..1862430,1862509..1862580,1862734..1862806,1862892..>1863269))	Acanthamoeba castellanii str. Neff	14918154
ACA1_065470	mRNA	ACA1_065470	NW_004457442.1	1863582	1865577	R	ACA1_065470	complement(join(<1863582..1864272,1864380..1864474,1864547..1864772,1864841..1864920,1864993..1865152,1865393..>1865577))	Acanthamoeba castellanii str. Neff	14918155
ACA1_065480	mRNA	ACA1_065480	NW_004457442.1	1866229	1866969	R	ACA1_065480	complement(join(<1866229..1866300,1866311..1866370,1866451..>1866969))	Acanthamoeba castellanii str. Neff	14917977
ACA1_065590	mRNA	ACA1_065590	NW_004457442.1	1867766	1868311	D	ACA1_065590	<1867766..>1868311	Acanthamoeba castellanii str. Neff	14917978
ACA1_065700	mRNA	ACA1_065700	NW_004457442.1	1873141	1875791	D	ACA1_065700	join(<1873141..1873157,1873244..1873378,1873504..1873717,1873786..1873819,1873893..1874072,1874150..1874213,1874283..1874325,1874391..1874573,1874677..1874730,1874829..1874885,1874968..1875010,1875082..1875275,1875409..1875549,1875687..>1875791)	Acanthamoeba castellanii str. Neff	14917979
ACA1_065710	mRNA	ACA1_065710	NW_004457442.1	1876830	1877956	D	ACA1_065710	join(<1876830..1877483,1877565..1877668,1877755..>1877956)	Acanthamoeba castellanii str. Neff	14917980
ACA1_065720	mRNA	ACA1_065720	NW_004457442.1	1878546	1879027	R	ACA1_065720	complement(join(<1878546..1878805,1878895..>1879027))	Acanthamoeba castellanii str. Neff	14917981
ACA1_065740	mRNA	ACA1_065740	NW_004457442.1	1888291	1888673	R	ACA1_065740	complement(join(<1888291..1888368,1888431..>1888673))	Acanthamoeba castellanii str. Neff	14917983
ACA1_065750	mRNA	ACA1_065750	NW_004457442.1	1888788	1890455	R	ACA1_065750	complement(join(<1888788..1888908,1889155..1889253,1889360..1889466,1889552..1889614,1889715..1890119,1890204..>1890455))	Acanthamoeba castellanii str. Neff	14917984
ACA1_065760	mRNA	ACA1_065760	NW_004457442.1	1890633	1891656	R	ACA1_065760	complement(join(<1890633..1890788,1890869..1891142,1891222..1891366,1891443..>1891656))	Acanthamoeba castellanii str. Neff	14917985
ACA1_065770	mRNA	ACA1_065770	NW_004457442.1	1892206	1901658	R	ACA1_065770	complement(join(<1892206..1892367,1892471..1892592,1892677..1892804,1892878..1892965,1893043..1893169,1893262..1893327,1893417..1893542,1893641..1893695,1893763..1893940,1894025..1894234,1894335..1894470,1894653..1894780,1894852..1895053,1895213..1895396,1895511..1895650,1895745..1895862,1895976..1896370,1896453..1896560,1896651..1896730,1896831..1896912,1897001..1897082,1897172..1897283,1897453..1898478,1898541..1898631,1898717..1898790,1898964..1899025,1899134..1899228,1899330..1899509,1899604..1899773,1899820..1899871,1899948..1900093,1900188..1900285,1900357..1900657,1900697..1900889,1900998..1901060,1901137..1901208,1901362..>1901658))	Acanthamoeba castellanii str. Neff	14917986
ACA1_065780	mRNA	ACA1_065780	NW_004457442.1	1902479	1903351	D	ACA1_065780	join(<1902479..1902736,1902854..>1903351)	Acanthamoeba castellanii str. Neff	14917987
ACA1_065790	mRNA	ACA1_065790	NW_004457442.1	1904369	1905051	D	ACA1_065790	join(<1904369..1904416,1904544..1904669,1904743..>1905051)	Acanthamoeba castellanii str. Neff	14917988
ACA1_065800	mRNA	ACA1_065800	NW_004457442.1	1905143	1911452	D	ACA1_065800	join(<1905143..1905266,1905307..1905592,1905691..1905878,1905947..1906059,1906149..1906382,1906463..1906721,1906802..1906959,1907076..1907556,1907642..1907742,1907829..1908187,1908282..1908438,1908513..1908678,1908756..1908969,1909069..1909381,1909456..1909564,1909639..1909952,1910053..1910221,1910292..1910597,1910664..1910988,1911233..>1911452)	Acanthamoeba castellanii str. Neff	14917989
ACA1_065810	mRNA	ACA1_065810	NW_004457442.1	1912340	1913722	R	ACA1_065810	complement(join(<1912340..1912571,1912650..1913114,1913180..1913394,1913456..>1913722))	Acanthamoeba castellanii str. Neff	14917990
ACA1_065820	mRNA	ACA1_065820	NW_004457442.1	1914028	1918303	D	ACA1_065820	join(<1914028..1914303,1914429..1914530,1914642..1914749,1914884..1915000,1915098..1915171,1915262..1915908,1916007..1916503,1916609..1916764,1916854..1916978,1917053..1917125,1917215..1917347,1917427..1918118,1918205..>1918303)	Acanthamoeba castellanii str. Neff	14917991
ACA1_065830	mRNA	ACA1_065830	NW_004457442.1	1918725	1920759	R	ACA1_065830	complement(join(<1918725..1918735,1918904..1918952,1919301..1919740,1919823..1919901,1919975..1920051,1920129..>1920759))	Acanthamoeba castellanii str. Neff	14917992
ACA1_065840	mRNA	ACA1_065840	NW_004457442.1	1921174	1922778	D	ACA1_065840	join(<1921174..1921317,1921420..1921510,1921619..1921696,1921771..1921822,1921943..1922033,1922120..1922227,1922299..1922361,1922465..1922538,1922709..>1922778)	Acanthamoeba castellanii str. Neff	14917993
ACA1_065860	mRNA	ACA1_065860	NW_004457442.1	1929859	1934656	R	ACA1_065860	complement(join(<1929859..1929986,1930049..1930310,1930405..1930498,1930569..1930850,1930988..1931087,1931182..1931278,1931329..1931588,1931658..1931749,1931826..1931920,1931992..1932091,1932299..1932364,1932403..1932621,1932713..1932904,1932980..1933103,1933180..1933311,1933374..1933515,1933595..1933822,1933900..1934028,1934095..1934186,1934283..1934528,1934587..>1934656))	Acanthamoeba castellanii str. Neff	14917995
ACA1_065870	mRNA	ACA1_065870	NW_004457442.1	1934907	1936467	D	ACA1_065870	join(<1934907..1936076,1936156..>1936467)	Acanthamoeba castellanii str. Neff	14917996
ACA1_065880	mRNA	ACA1_065880	NW_004457442.1	1936152	1939643	R	ACA1_065880	complement(join(<1936152..1936263,1936345..1936436,1936643..1937877,1937975..1938203,1938279..1938438,1938508..1938690,1938900..1938981,1939089..1939177,1939251..1939360,1939608..>1939643))	Acanthamoeba castellanii str. Neff	14917997
ACA1_065890	mRNA	ACA1_065890	NW_004457442.1	1939728	1941758	D	ACA1_065890	join(<1939728..1939824,1939895..1939971,1940042..1940150,1940278..1940423,1940539..1940912,1941005..1941150,1941247..1941533,1941600..>1941758)	Acanthamoeba castellanii str. Neff	14918204
ACA1_065900	mRNA	ACA1_065900	NW_004457442.1	1941876	1943349	R	ACA1_065900	complement(join(<1941876..1942129,1942220..1942408,1942543..1942637,1942712..1942857,1942985..1943053,1943143..1943201,1943307..>1943349))	Acanthamoeba castellanii str. Neff	14918205
ACA1_065910	mRNA	ACA1_065910	NW_004457442.1	1944532	1946880	D	ACA1_065910	join(<1944532..1944900,1945002..1945204,1945278..1945634,1945718..1945841,1945920..1946046,1946136..1946593,1946773..>1946880)	Acanthamoeba castellanii str. Neff	14918206
ACA1_065920	mRNA	ACA1_065920	NW_004457442.1	1946769	1951253	R	ACA1_065920	complement(join(<1946769..1947186,1947280..1947788,1947859..1947918,1947985..1948075,1948190..1948263,1948352..1948406,1948494..1948677,1948748..1948832,1948954..1949045,1949154..1949273,1949335..1949589,1949665..1949817,1949902..1949985,1950091..1950162,1950263..1950475,1950565..1950748,1950840..1950955,1951100..>1951253))	Acanthamoeba castellanii str. Neff	14918207
ACA1_065930	mRNA	ACA1_065930	NW_004457442.1	1951476	1953744	R	ACA1_065930	complement(join(<1951476..1951637,1951723..1951888,1951962..1952089,1952170..1952229,1952324..1952426,1952499..1953141,1953153..1953324,1953350..1953415,1953483..1953599,1953673..>1953744))	Acanthamoeba castellanii str. Neff	14918208
ACA1_065940	mRNA	ACA1_065940	NW_004457442.1	1953826	1959350	D	ACA1_065940	join(<1953826..1953922,1954044..1954112,1954185..1954410,1954466..1954572,1954644..1954786,1954864..1954964,1955043..1955130,1955197..1955295,1955379..1955504,1955581..1955689,1955783..1955920,1955992..1956062,1956137..1956232,1956305..1956366,1956445..1956584,1956618..1956809,1956901..1957073,1957150..1957317,1957384..1957479,1957558..1957714,1957814..1957932,1958028..1958128,1958205..1958292,1958375..1958530,1958622..1958789,1958870..1958951,1959068..1959146,1959194..>1959350)	Acanthamoeba castellanii str. Neff	14918209
ACA1_065950	mRNA	ACA1_065950	NW_004457442.1	1959529	1961122	D	ACA1_065950	join(<1959529..1959546,1959598..1959646,1959752..1959831,1959950..1960115,1960249..1960396,1960524..1960670,1960936..>1961122)	Acanthamoeba castellanii str. Neff	14918210
ACA1_065960	mRNA	ACA1_065960	NW_004457442.1	1960816	1962975	R	ACA1_065960	complement(<1960816..>1962975)	Acanthamoeba castellanii str. Neff	14918211
ACA1_065970	mRNA	ACA1_065970	NW_004457442.1	1963614	1964339	R	ACA1_065970	complement(join(<1963614..1963755,1963877..1963947,1964011..1964112,1964211..>1964339))	Acanthamoeba castellanii str. Neff	14918212
ACA1_065980	mRNA	ACA1_065980	NW_004457442.1	1964543	1968551	R	ACA1_065980	complement(join(<1964543..1964852,1964974..1965087,1965154..1965233,1965319..1965450,1965527..1965759,1965844..1966367,1966452..1966562,1966639..1966776,1966845..1966998,1967092..1967208,1967271..1967447,1967570..1967876,1967940..1968121,1968215..1968412,1968506..>1968551))	Acanthamoeba castellanii str. Neff	14918213
ACA1_065990	mRNA	ACA1_065990	NW_004457442.1	1969242	1969757	R	ACA1_065990	complement(<1969242..>1969757)	Acanthamoeba castellanii str. Neff	14918214
ACA1_066000	mRNA	ACA1_066000	NW_004457442.1	1970229	1971455	D	ACA1_066000	join(<1970229..1970290,1970441..1970682,1970765..1971115,1971229..>1971455)	Acanthamoeba castellanii str. Neff	14918215
ACA1_066010	mRNA	ACA1_066010	NW_004457442.1	1971695	1972308	R	ACA1_066010	complement(join(<1971695..1971811,1971911..1971994,1972084..1972155,1972219..>1972308))	Acanthamoeba castellanii str. Neff	14918216
ACA1_066020	mRNA	ACA1_066020	NW_004457442.1	1972770	1974955	D	ACA1_066020	join(<1972770..1973039,1973072..1973175,1973259..1973386,1973482..1973564,1973641..1973713,1973785..1973843,1973945..1974091,1974180..1974254,1974353..1974442,1974530..>1974955)	Acanthamoeba castellanii str. Neff	14918217
ACA1_066030	mRNA	ACA1_066030	NW_004457442.1	1975071	1978977	R	ACA1_066030	complement(join(<1975071..1975169,1975289..1975360,1975539..1975653,1975760..1975835,1975898..1976030,1976124..1976212,1976296..1976375,1976452..1976591,1976723..1976830,1976934..1977555,1977639..1977717,1977810..>1978977))	Acanthamoeba castellanii str. Neff	14918218
ACA1_066040	mRNA	ACA1_066040	NW_004457442.1	1979465	1981740	R	ACA1_066040	complement(join(<1979465..1979612,1979701..1979837,1979912..1980510,1980579..>1981740))	Acanthamoeba castellanii str. Neff	14918219
ACA1_066050	mRNA	ACA1_066050	NW_004457442.1	1982386	1987251	R	ACA1_066050	complement(join(<1982386..1982487,1982548..1982679,1982756..1982880,1982962..1983072,1983158..1983244,1983340..1983484,1983581..1983735,1983822..1983958,1984046..1984116,1984205..1984279,1984365..1984472,1984550..1984628,1984707..1984794,1984862..1984968,1985036..1985180,1985251..1985367,1985428..1985841,1986083..1986199,1986263..1986335,1986415..1986566,1986596..1986664,1986727..1986850,1986926..1987032,1987173..>1987251))	Acanthamoeba castellanii str. Neff	14918220
ACA1_066060	mRNA	ACA1_066060	NW_004457442.1	1988100	1989961	R	ACA1_066060	complement(join(<1988100..1988172,1988265..1988727,1988813..1988996,1989093..1989230,1989294..1989419,1989556..1989724,1989822..>1989961))	Acanthamoeba castellanii str. Neff	14918221
ACA1_066070	mRNA	ACA1_066070	NW_004457442.1	1990336	1991817	R	ACA1_066070	complement(<1990336..>1991817)	Acanthamoeba castellanii str. Neff	14918092
ACA1_066080	mRNA	ACA1_066080	NW_004457442.1	1992413	1993870	R	ACA1_066080	complement(<1992413..>1993870)	Acanthamoeba castellanii str. Neff	14918093
ACA1_066090	mRNA	ACA1_066090	NW_004457442.1	1994618	1995178	D	ACA1_066090	<1994618..>1995178	Acanthamoeba castellanii str. Neff	14918094
ACA1_066100	mRNA	ACA1_066100	NW_004457442.1	1995270	1997840	R	ACA1_066100	complement(join(<1995270..1996153,1996247..1996336,1996417..1996693,1996769..1996906,1997005..1997133,1997235..1997292,1997574..1997616,1997729..>1997840))	Acanthamoeba castellanii str. Neff	14918095
ACA1_066110	mRNA	ACA1_066110	NW_004457442.1	1998144	1998876	D	ACA1_066110	join(<1998144..1998301,1998403..1998575,1998668..>1998876)	Acanthamoeba castellanii str. Neff	14918096
ACA1_066120	mRNA	ACA1_066120	NW_004457442.1	1999091	2002381	R	ACA1_066120	complement(join(<1999091..1999581,1999749..1999875,1999961..2000075,2000203..2000354,2000487..2000684,2000829..2001025,2001150..2001267,2001398..2001493,2001623..2002042,2002214..>2002381))	Acanthamoeba castellanii str. Neff	14918097
ACA1_066130	mRNA	ACA1_066130	NW_004457442.1	2002759	2003139	D	ACA1_066130	<2002759..>2003139	Acanthamoeba castellanii str. Neff	14918098
ACA1_066140	mRNA	ACA1_066140	NW_004457442.1	2003519	2004399	R	ACA1_066140	complement(join(<2003519..2003680,2003892..2004164,2004331..>2004399))	Acanthamoeba castellanii str. Neff	14918099
ACA1_066150	mRNA	ACA1_066150	NW_004457442.1	2004798	2015975	D	ACA1_066150	join(<2004798..2004923,2005023..2005112,2005187..2005281,2005405..2005573,2005683..2005749,2005864..2005962,2006052..2006155,2006258..2006359,2006452..2006515,2006641..2006759,2006866..2006943,2007043..2007204,2007298..2007432,2007544..2007690,2007781..2007945,2008102..2008203,2008289..2008374,2008467..2008614,2008710..2008777,2008866..2008995,2009085..2009174,2009253..2009341,2009405..2009601,2009686..2009777,2009891..2010030,2010109..2010253,2010356..2010567,2010668..2010779,2010891..2011025,2011113..2011191,2011285..2011404,2011485..2011633,2011717..2011841,2011922..2012189,2012261..2012380,2012449..2012535,2012643..2012765,2012866..2012974,2013046..2013202,2013279..2013417,2013507..2013623,2013715..2013827,2013928..2014058,2014193..2014400,2014513..2014675,2014786..2014911,2014983..2015092,2015185..2015323,2015412..2015549,2015698..2015817,2015913..>2015975)	Acanthamoeba castellanii str. Neff	14918100
ACA1_066160	mRNA	ACA1_066160	NW_004457442.1	2017085	2018058	R	ACA1_066160	complement(join(<2017085..2017136,2017190..2017376,2017448..2017534,2017601..2017938,2018004..>2018058))	Acanthamoeba castellanii str. Neff	14918101
ACA1_066170	mRNA	ACA1_066170	NW_004457442.1	2018369	2021602	R	ACA1_066170	complement(<2018369..>2021602)	Acanthamoeba castellanii str. Neff	14918102
ACA1_066180	mRNA	ACA1_066180	NW_004457442.1	2021934	2022756	D	ACA1_066180	join(<2021934..2022137,2022249..2022354,2022485..>2022756)	Acanthamoeba castellanii str. Neff	14918103
ACA1_066200	mRNA	ACA1_066200	NW_004457442.1	2023750	2023971	R	ACA1_066200	complement(<2023750..>2023971)	Acanthamoeba castellanii str. Neff	14918105
ACA1_066210	mRNA	ACA1_066210	NW_004457442.1	2023998	2024575	D	ACA1_066210	join(<2023998..2024274,2024337..>2024575)	Acanthamoeba castellanii str. Neff	14918106
ACA1_066220	mRNA	ACA1_066220	NW_004457442.1	2024982	2026111	R	ACA1_066220	complement(join(<2024982..2025367,2025400..>2026111))	Acanthamoeba castellanii str. Neff	14918107
ACA1_066230	mRNA	ACA1_066230	NW_004457442.1	2027068	2027676	R	ACA1_066230	complement(<2027068..>2027676)	Acanthamoeba castellanii str. Neff	14918108
ACA1_066240	mRNA	ACA1_066240	NW_004457442.1	2027914	2028692	R	ACA1_066240	complement(join(<2027914..2028453,2028471..>2028692))	Acanthamoeba castellanii str. Neff	14918109
ACA1_066250	mRNA	ACA1_066250	NW_004457442.1	2028754	2030273	R	ACA1_066250	complement(join(<2028754..2028849,2028937..2029860,2029890..>2030273))	Acanthamoeba castellanii str. Neff	14918110
ACA1_066260	mRNA	ACA1_066260	NW_004457442.1	2030304	2030684	R	ACA1_066260	complement(<2030304..>2030684)	Acanthamoeba castellanii str. Neff	14918111
ACA1_066270	mRNA	ACA1_066270	NW_004457442.1	2030955	2031907	R	ACA1_066270	complement(join(<2030955..2031285,2031360..>2031907))	Acanthamoeba castellanii str. Neff	14918112
ACA1_066280	mRNA	ACA1_066280	NW_004457442.1	2031949	2033097	R	ACA1_066280	complement(<2031949..>2033097)	Acanthamoeba castellanii str. Neff	14918113
ACA1_066290	mRNA	ACA1_066290	NW_004457442.1	2033419	2034555	D	ACA1_066290	join(<2033419..2033845,2033921..>2034555)	Acanthamoeba castellanii str. Neff	14918114
ACA1_066300	mRNA	ACA1_066300	NW_004457442.1	2034677	2035183	R	ACA1_066300	complement(<2034677..>2035183)	Acanthamoeba castellanii str. Neff	14918115
ACA1_066310	mRNA	ACA1_066310	NW_004457442.1	2035892	2036325	R	ACA1_066310	complement(join(<2035892..2035984,2036176..>2036325))	Acanthamoeba castellanii str. Neff	14918116
ACA1_132010	mRNA	ACA1_132010	NW_004457441.1	34	462	R	ACA1_132010	complement(<34..>462)	Acanthamoeba castellanii str. Neff	14917765
ACA1_132120	mRNA	ACA1_132120	NW_004457441.1	6116	6807	D	ACA1_132120	join(<6116..6338,6537..6646,6658..>6807)	Acanthamoeba castellanii str. Neff	14917773
ACA1_132130	mRNA	ACA1_132130	NW_004457441.1	6861	7408	R	ACA1_132130	complement(join(<6861..6983,7070..>7408))	Acanthamoeba castellanii str. Neff	14917774
ACA1_132140	mRNA	ACA1_132140	NW_004457441.1	8121	10839	R	ACA1_132140	complement(join(<8121..8439,8605..8743,8900..9035,9157..9318,9441..9561,9666..9703,9769..9859,10037..10130,10262..10307,10505..10607,10679..>10839))	Acanthamoeba castellanii str. Neff	14917750
ACA1_132350	mRNA	ACA1_132350	NW_004457441.1	13692	15871	R	ACA1_132350	complement(join(<13692..13803,13873..13972,14113..14244,14315..14529,14632..14742,14863..15009,15122..15399,15564..15608,15730..>15871))	Acanthamoeba castellanii str. Neff	14917751
ACA1_132360	mRNA	ACA1_132360	NW_004457441.1	17320	20503	R	ACA1_132360	complement(join(<17320..17664,17748..17906,18024..18157,18234..18422,18538..18815,18908..19116,19201..19359,19434..19749,19813..20039,20134..20230,20349..>20503))	Acanthamoeba castellanii str. Neff	14917752
ACA1_132370	mRNA	ACA1_132370	NW_004457441.1	20795	21031	R	ACA1_132370	complement(join(<20795..20855,20967..>21031))	Acanthamoeba castellanii str. Neff	14917766
ACA1_132380	mRNA	ACA1_132380	NW_004457441.1	21368	21777	D	ACA1_132380	join(<21368..21470,21695..>21777)	Acanthamoeba castellanii str. Neff	14917767
ACA1_132390	mRNA	ACA1_132390	NW_004457441.1	21905	22361	D	ACA1_132390	join(<21905..21986,22210..>22361)	Acanthamoeba castellanii str. Neff	14917768
ACA1_132400	mRNA	ACA1_132400	NW_004457441.1	22686	23640	D	ACA1_132400	join(<22686..22859,22957..>23640)	Acanthamoeba castellanii str. Neff	14917769
ACA1_132410	mRNA	ACA1_132410	NW_004457441.1	23871	25884	R	ACA1_132410	complement(join(<23871..23909,23926..23980,24162..24434,24549..24745,24842..24918,25031..25101,25149..25193,25280..25347,25442..25606,25732..>25884))	Acanthamoeba castellanii str. Neff	14917770
ACA1_132420	mRNA	ACA1_132420	NW_004457441.1	26735	28059	R	ACA1_132420	complement(join(<26735..27397,27557..27713,27809..>28059))	Acanthamoeba castellanii str. Neff	14917771
ACA1_132430	mRNA	ACA1_132430	NW_004457441.1	28282	30306	R	ACA1_132430	complement(join(<28282..28325,28390..28516,28680..28794,28927..29109,29228..29612,29626..29750,29857..29981,30077..30161,30269..>30306))	Acanthamoeba castellanii str. Neff	14917772
ACA1_132540	mRNA	ACA1_132540	NW_004457441.1	31196	31363	D	ACA1_132540	<31196..>31363	Acanthamoeba castellanii str. Neff	14917753
ACA1_132550	mRNA	ACA1_132550	NW_004457441.1	31387	32544	R	ACA1_132550	complement(join(<31387..31875,31893..32024,32089..32275,32303..32415,32455..>32544))	Acanthamoeba castellanii str. Neff	14917754
ACA1_132560	mRNA	ACA1_132560	NW_004457441.1	33643	35092	R	ACA1_132560	complement(join(<33643..33835,33952..34659,34686..34924,34964..>35092))	Acanthamoeba castellanii str. Neff	14917755
ACA1_132570	mRNA	ACA1_132570	NW_004457441.1	35346	36943	R	ACA1_132570	complement(join(<35346..35352,35530..35752,35846..35956,36054..36463,36591..36691,36785..>36943))	Acanthamoeba castellanii str. Neff	14917756
ACA1_132580	mRNA	ACA1_132580	NW_004457441.1	37313	38751	D	ACA1_132580	join(<37313..37689,37781..37868,37975..>38751)	Acanthamoeba castellanii str. Neff	14917757
ACA1_132590	mRNA	ACA1_132590	NW_004457441.1	39477	40107	D	ACA1_132590	join(<39477..39838,39921..>40107)	Acanthamoeba castellanii str. Neff	14917758
ACA1_132600	mRNA	ACA1_132600	NW_004457441.1	40788	44000	D	ACA1_132600	join(<40788..41048,41139..41236,41371..41774,41933..42043,42137..42366,42557..42736,42942..43306,43396..43660,43839..>44000)	Acanthamoeba castellanii str. Neff	14917759
ACA1_132610	mRNA	ACA1_132610	NW_004457441.1	44205	45478	D	ACA1_132610	join(<44205..44455,44549..44705,44858..>45478)	Acanthamoeba castellanii str. Neff	14917760
ACA1_132620	mRNA	ACA1_132620	NW_004457441.1	45551	47239	R	ACA1_132620	complement(join(<45551..45599,45693..45759,45868..46015,46111..46169,46262..46448,46571..46737,46861..>47239))	Acanthamoeba castellanii str. Neff	14917761
ACA1_132630	mRNA	ACA1_132630	NW_004457441.1	47595	49262	D	ACA1_132630	join(<47595..47816,48023..48105,48256..48343,48443..48544,48569..48691,48788..48968,49066..>49262)	Acanthamoeba castellanii str. Neff	14917762
ACA1_132640	mRNA	ACA1_132640	NW_004457441.1	49491	55213	R	ACA1_132640	complement(join(<49491..50261,50276..50662,50800..50922,51071..51147,51268..51400,51482..51555,51667..51800,51904..52059,52147..52297,52439..52544,53052..53863,54091..>55213))	Acanthamoeba castellanii str. Neff	14917763
ACA1_132660	mRNA	ACA1_132660	NW_004457441.1	60047	63377	D	ACA1_132660	join(<60047..60115,60410..60490,60613..60798,60884..60949,61031..61149,61271..61466,61536..61679,61750..61907,62014..62090,62182..62258,62350..62475,62729..62835,62943..63123,63246..>63377)	Acanthamoeba castellanii str. Neff	14917735
ACA1_132670	mRNA	ACA1_132670	NW_004457441.1	63551	64722	R	ACA1_132670	complement(join(<63551..63672,63775..63874,63952..64017,64118..64192,64270..64350,64486..64530,64630..>64722))	Acanthamoeba castellanii str. Neff	14917736
ACA1_132680	mRNA	ACA1_132680	NW_004457441.1	64848	65523	R	ACA1_132680	complement(join(<64848..64937,65074..>65523))	Acanthamoeba castellanii str. Neff	14917737
ACA1_132800	mRNA	ACA1_132800	NW_004457441.1	72811	76993	R	ACA1_132800	complement(join(<72811..72833,72893..72970,73074..73361,73428..73509,73601..73650,73741..73812,73918..73978,74078..74239,74326..74484,74603..74708,74788..74945,75036..75116,75192..75299,75421..75515,75597..75680,75751..75922,76010..76078,76141..76215,76503..76540,76619..76662,76742..76804,76872..>76993))	Acanthamoeba castellanii str. Neff	14917739
ACA1_132810	mRNA	ACA1_132810	NW_004457441.1	78433	78680	R	ACA1_132810	complement(join(<78433..78491,78539..>78680))	Acanthamoeba castellanii str. Neff	14917740
ACA1_132830	mRNA	ACA1_132830	NW_004457441.1	81625	82965	R	ACA1_132830	complement(<81625..>82965)	Acanthamoeba castellanii str. Neff	14917742
ACA1_132840	mRNA	ACA1_132840	NW_004457441.1	83355	85361	D	ACA1_132840	join(<83355..83623,83691..83850,83929..84030,84115..84240,84323..84415,84485..84557,84631..84716,84789..84887,84960..85154,85242..>85361)	Acanthamoeba castellanii str. Neff	14917743
ACA1_132850	mRNA	ACA1_132850	NW_004457441.1	85890	87643	D	ACA1_132850	join(<85890..85957,86049..86120,86240..86323,86428..86503,86630..86674,86798..86886,86985..87142,87220..87390,87489..87572,87630..>87643)	Acanthamoeba castellanii str. Neff	14917744
ACA1_132860	mRNA	ACA1_132860	NW_004457441.1	88158	89650	D	ACA1_132860	join(<88158..88226,88328..88398,88491..88551,88654..88724,88816..88898,89017..89160,89231..89306,89358..89407,89487..>89650)	Acanthamoeba castellanii str. Neff	14917745
ACA1_132870	mRNA	ACA1_132870	NW_004457441.1	89825	90920	D	ACA1_132870	join(<89825..89831,89933..90030,90108..90181,90262..90403,90469..90514,90604..90776,90876..>90920)	Acanthamoeba castellanii str. Neff	14917746
ACA1_132880	mRNA	ACA1_132880	NW_004457441.1	91251	92227	D	ACA1_132880	join(<91251..91389,91482..91577,91650..91809,91910..92027,92099..>92227)	Acanthamoeba castellanii str. Neff	14917747
ACA1_132890	mRNA	ACA1_132890	NW_004457441.1	92326	95411	D	ACA1_132890	join(<92326..92419,92492..92576,92672..92769,92850..92902,92966..93044,93140..93273,93344..93433,93528..93644,93753..93810,93883..94025,94107..94211,94309..94440,94468..94623,94730..94801,94886..95099,95162..95242,95326..>95411)	Acanthamoeba castellanii str. Neff	14917748
ACA1_132900	mRNA	ACA1_132900	NW_004457441.1	95933	98856	D	ACA1_132900	join(<95933..96180,96806..97105,98090..98242,98321..98385,98451..98597,98699..>98856)	Acanthamoeba castellanii str. Neff	14917749
ACA1_133010	mRNA	ACA1_133010	NW_004457441.1	101380	103987	D	ACA1_133010	join(<101380..101453,101504..101557,101624..101705,101778..102275,102341..102598,102669..102821,102839..102952,103110..103193,103627..103833,103859..>103987)	Acanthamoeba castellanii str. Neff	14917775
ACA1_020460	mRNA	ACA1_020460	NW_004457440.1	5697	7027	R	ACA1_020460	complement(join(<5697..5756,5771..>7027))	Acanthamoeba castellanii str. Neff	14917731
ACA1_020470	mRNA	ACA1_020470	NW_004457440.1	7058	7438	R	ACA1_020470	complement(<7058..>7438)	Acanthamoeba castellanii str. Neff	14917732
ACA1_020480	mRNA	ACA1_020480	NW_004457440.1	7753	8928	R	ACA1_020480	complement(join(<7753..8458,8480..>8928))	Acanthamoeba castellanii str. Neff	14917733
ACA1_020490	mRNA	ACA1_020490	NW_004457440.1	8970	9745	R	ACA1_020490	complement(join(<8970..9050,9151..9345,9384..9641,9677..>9745))	Acanthamoeba castellanii str. Neff	14917734
ACA1_020500	mRNA	ACA1_020500	NW_004457440.1	11666	13911	D	ACA1_020500	join(<11666..12125,12500..12685,12731..12834,12934..13299,13393..>13911)	Acanthamoeba castellanii str. Neff	14917727
ACA1_020510	mRNA	ACA1_020510	NW_004457440.1	15079	15603	D	ACA1_020510	<15079..>15603	Acanthamoeba castellanii str. Neff	14917728
ACA1_020520	mRNA	ACA1_020520	NW_004457440.1	16468	17411	D	ACA1_020520	join(<16468..17242,17377..>17411)	Acanthamoeba castellanii str. Neff	14917729
ACA1_020530	mRNA	ACA1_020530	NW_004457440.1	20010	20732	D	ACA1_020530	<20010..>20732	Acanthamoeba castellanii str. Neff	14917730
ACA1_002430	mRNA	ACA1_002430	NW_004457439.1	85	1711	R	ACA1_002430	complement(join(<85..156,244..311,425..447,514..622,705..780,918..973,1064..1142,1229..1303,1390..1406,1552..>1711))	Acanthamoeba castellanii str. Neff	14917724
ACA1_002440	mRNA	ACA1_002440	NW_004457439.1	2197	2952	D	ACA1_002440	join(<2197..2336,2414..2483,2545..2670,2737..>2952)	Acanthamoeba castellanii str. Neff	14917725
ACA1_002450	mRNA	ACA1_002450	NW_004457439.1	3032	3921	D	ACA1_002450	join(<3032..3054,3126..3186,3247..3351,3434..3577,3660..3780,3845..>3921)	Acanthamoeba castellanii str. Neff	14917726
ACA1_002460	mRNA	ACA1_002460	NW_004457439.1	3998	4873	D	ACA1_002460	join(<3998..4128,4206..4290,4527..4624,4663..>4873)	Acanthamoeba castellanii str. Neff	14917718
ACA1_002470	mRNA	ACA1_002470	NW_004457439.1	5213	5698	D	ACA1_002470	join(<5213..5281,5413..5530,5616..>5698)	Acanthamoeba castellanii str. Neff	14917719
ACA1_002480	mRNA	ACA1_002480	NW_004457439.1	5820	6587	R	ACA1_002480	complement(<5820..>6587)	Acanthamoeba castellanii str. Neff	14917720
ACA1_002490	mRNA	ACA1_002490	NW_004457439.1	7127	8249	R	ACA1_002490	complement(join(<7127..7378,7452..7570,7675..7734,7809..8012,8084..>8249))	Acanthamoeba castellanii str. Neff	14917721
ACA1_002500	mRNA	ACA1_002500	NW_004457439.1	8550	10929	D	ACA1_002500	join(<8550..8773,8852..8966,9043..9176,9297..9421,9544..9698,9805..9946,10020..10208,10284..10413,10493..10553,10613..10752,10842..>10929)	Acanthamoeba castellanii str. Neff	14917722
ACA1_002510	mRNA	ACA1_002510	NW_004457439.1	11735	12781	D	ACA1_002510	<11735..>12781	Acanthamoeba castellanii str. Neff	14917723
ACA1_304160	mRNA	ACA1_304160	NW_004457438.1	163	672	D	ACA1_304160	<163..>672	Acanthamoeba castellanii str. Neff	14917717
ACA1_304270	mRNA	ACA1_304270	NW_004457438.1	4225	11419	D	ACA1_304270	join(<4225..4436,4589..4695,4825..4920,5151..5335,5501..5629,5724..5978,6085..6224,6337..6470,6580..6683,6764..7337,7436..7561,7691..8005,8101..8218,8318..8474,8615..8828,8914..9018,9119..9232,9347..9435,9541..9703,9801..9946,10043..10351,10454..10719,10801..>11419)	Acanthamoeba castellanii str. Neff	14917715
ACA1_304280	mRNA	ACA1_304280	NW_004457438.1	12463	13022	R	ACA1_304280	complement(join(<12463..12948,12981..>13022))	Acanthamoeba castellanii str. Neff	14917716
ACA1_304290	mRNA	ACA1_304290	NW_004457438.1	15033	16117	D	ACA1_304290	join(<15033..15469,15724..15931,15992..16018,16049..>16117)	Acanthamoeba castellanii str. Neff	14917701
ACA1_304300	mRNA	ACA1_304300	NW_004457438.1	16348	17455	R	ACA1_304300	complement(join(<16348..16515,16568..16702,16724..>17455))	Acanthamoeba castellanii str. Neff	14917702
ACA1_304310	mRNA	ACA1_304310	NW_004457438.1	18187	19218	D	ACA1_304310	join(<18187..18607,18689..>19218)	Acanthamoeba castellanii str. Neff	14917703
ACA1_304320	mRNA	ACA1_304320	NW_004457438.1	19785	20296	R	ACA1_304320	complement(join(<19785..20101,20128..>20296))	Acanthamoeba castellanii str. Neff	14917704
ACA1_304330	mRNA	ACA1_304330	NW_004457438.1	20315	21159	R	ACA1_304330	complement(join(<20315..20324,20348..>21159))	Acanthamoeba castellanii str. Neff	14917705
ACA1_304340	mRNA	ACA1_304340	NW_004457438.1	21228	22395	R	ACA1_304340	complement(join(<21228..21854,21905..22219,22240..>22395))	Acanthamoeba castellanii str. Neff	14917706
ACA1_304350	mRNA	ACA1_304350	NW_004457438.1	22886	23479	R	ACA1_304350	complement(<22886..>23479)	Acanthamoeba castellanii str. Neff	14917707
ACA1_304360	mRNA	ACA1_304360	NW_004457438.1	23612	25518	D	ACA1_304360	join(<23612..23752,23841..23910,23992..24041,24135..24320,24433..24510,24604..24682,24785..24976,25115..25216,25361..>25518)	Acanthamoeba castellanii str. Neff	14917708
ACA1_304370	mRNA	ACA1_304370	NW_004457438.1	25641	26240	R	ACA1_304370	complement(<25641..>26240)	Acanthamoeba castellanii str. Neff	14917709
ACA1_304380	mRNA	ACA1_304380	NW_004457438.1	26485	27615	R	ACA1_304380	complement(join(<26485..26657,26751..26852,26938..26975,27062..27179,27271..27356,27440..>27615))	Acanthamoeba castellanii str. Neff	14917710
ACA1_304390	mRNA	ACA1_304390	NW_004457438.1	28475	30575	D	ACA1_304390	join(<28475..28914,29973..30039,30211..30392,30464..>30575)	Acanthamoeba castellanii str. Neff	14917711
ACA1_304500	mRNA	ACA1_304500	NW_004457438.1	30684	31193	R	ACA1_304500	complement(<30684..>31193)	Acanthamoeba castellanii str. Neff	14917712
ACA1_304510	mRNA	ACA1_304510	NW_004457438.1	32042	34363	D	ACA1_304510	join(<32042..32516,32675..32994,33303..33392,33470..33593,33745..33878,33980..34111,34163..34220,34344..>34363)	Acanthamoeba castellanii str. Neff	14917713
ACA1_304520	mRNA	ACA1_304520	NW_004457438.1	35252	36005	R	ACA1_304520	complement(<35252..>36005)	Acanthamoeba castellanii str. Neff	14917714
ACA1_127860	mRNA	ACA1_127860	NW_004457437.1	6520	7394	R	ACA1_127860	complement(join(<6520..6763,6799..6986,7031..7141,7155..>7394))	Acanthamoeba castellanii str. Neff	14917700
ACA1_127870	mRNA	ACA1_127870	NW_004457437.1	7451	8344	R	ACA1_127870	complement(join(<7451..7879,7936..8085,8146..8237,8320..>8344))	Acanthamoeba castellanii str. Neff	14917687
ACA1_127880	mRNA	ACA1_127880	NW_004457437.1	8389	9413	D	ACA1_127880	join(<8389..8424,8484..8562,8674..8703,8769..8822,8937..9029,9133..9203,9291..>9413)	Acanthamoeba castellanii str. Neff	14917688
ACA1_127890	mRNA	ACA1_127890	NW_004457437.1	9513	11112	R	ACA1_127890	complement(join(<9513..10016,10237..10329,10617..10757,10862..10920,11058..>11112))	Acanthamoeba castellanii str. Neff	14917689
ACA1_127900	mRNA	ACA1_127900	NW_004457437.1	11453	12032	D	ACA1_127900	join(<11453..11551,11721..>12032)	Acanthamoeba castellanii str. Neff	14917678
ACA1_127910	mRNA	ACA1_127910	NW_004457437.1	13690	15012	D	ACA1_127910	join(<13690..13767,14082..14334,14443..14727,14798..>15012)	Acanthamoeba castellanii str. Neff	14917679
ACA1_128020	mRNA	ACA1_128020	NW_004457437.1	15110	18453	D	ACA1_128020	join(<15110..15146,15363..15689,15788..15886,15969..16044,16181..16296,16369..16470,16552..16638,16791..16952,17030..17088,17180..17347,17521..17574,17703..17810,17978..18126,18167..18358,18429..>18453)	Acanthamoeba castellanii str. Neff	14917680
ACA1_128040	mRNA	ACA1_128040	NW_004457437.1	25147	31620	D	ACA1_128040	join(<25147..26091,26196..26411,26511..26606,26742..26871,26965..27077,27157..27334,27448..27551,27683..27889,28021..28130,28207..28270,28338..28450,28572..28776,28901..29002,29098..29162,29305..29421,29546..29687,29778..29927,30035..30150,30360..30476,30579..30669,30772..30863,31093..31150,31306..>31620)	Acanthamoeba castellanii str. Neff	14917682
ACA1_128050	mRNA	ACA1_128050	NW_004457437.1	32112	32904	D	ACA1_128050	join(<32112..32185,32418..32484,32530..>32904)	Acanthamoeba castellanii str. Neff	14917683
ACA1_128170	mRNA	ACA1_128170	NW_004457437.1	36895	43383	D	ACA1_128170	join(<36895..36980,37179..37311,37434..37527,37662..37690,37929..38051,38147..38268,38409..38605,38719..38986,39128..39342,39460..39584,39735..39885,39994..40291,40378..40500,40623..40774,40860..41030,41152..41248,41363..41513,41603..41862,41954..42253,42404..42545,42700..42822,42953..43087,43186..>43383)	Acanthamoeba castellanii str. Neff	14917685
ACA1_128180	mRNA	ACA1_128180	NW_004457437.1	43434	44837	R	ACA1_128180	complement(join(<43434..43511,43639..43787,43909..44024,44111..44235,44329..44409,44433..44502,44620..>44837))	Acanthamoeba castellanii str. Neff	14917686
ACA1_128190	mRNA	ACA1_128190	NW_004457437.1	45025	45427	D	ACA1_128190	join(<45025..45159,45257..>45427)	Acanthamoeba castellanii str. Neff	14917666
ACA1_128200	mRNA	ACA1_128200	NW_004457437.1	45588	47067	R	ACA1_128200	complement(join(<45588..45706,45753..45813,45910..46067,46152..46269,46383..46549,46642..46717,46840..>47067))	Acanthamoeba castellanii str. Neff	14917667
ACA1_128210	mRNA	ACA1_128210	NW_004457437.1	47719	49446	R	ACA1_128210	complement(join(<47719..48390,48431..48642,48987..49116,49237..>49446))	Acanthamoeba castellanii str. Neff	14917668
ACA1_128220	mRNA	ACA1_128220	NW_004457437.1	51197	51619	D	ACA1_128220	join(<51197..51243,51424..>51619)	Acanthamoeba castellanii str. Neff	14917669
ACA1_128230	mRNA	ACA1_128230	NW_004457437.1	52313	52871	R	ACA1_128230	complement(join(<52313..52548,52620..52788,52845..>52871))	Acanthamoeba castellanii str. Neff	14917670
ACA1_128240	mRNA	ACA1_128240	NW_004457437.1	53934	57468	D	ACA1_128240	join(<53934..53941,54276..54362,54725..54854,55424..55729,55835..55990,56272..56388,56491..56652,56771..56893,56991..57125,57274..>57468)	Acanthamoeba castellanii str. Neff	14917671
ACA1_128450	mRNA	ACA1_128450	NW_004457437.1	59032	60176	R	ACA1_128450	complement(join(<59032..59646,59750..59944,60045..>60176))	Acanthamoeba castellanii str. Neff	14917672
ACA1_128470	mRNA	ACA1_128470	NW_004457437.1	63863	65750	D	ACA1_128470	join(<63863..63926,64012..64054,64145..64231,64407..64545,64566..64696,64833..64926,65053..65296,65434..65588,65679..>65750)	Acanthamoeba castellanii str. Neff	14917674
ACA1_128480	mRNA	ACA1_128480	NW_004457437.1	66216	68634	R	ACA1_128480	complement(join(<66216..66262,66368..66442,66556..66656,66785..67005,67123..67397,67497..67968,68149..>68634))	Acanthamoeba castellanii str. Neff	14917675
ACA1_128490	mRNA	ACA1_128490	NW_004457437.1	68849	72570	R	ACA1_128490	complement(join(<68849..69793,69927..70450,70535..70721,70821..71045,71148..71267,71368..71595,71682..72088,72181..72350,72428..>72570))	Acanthamoeba castellanii str. Neff	14917676
ACA1_128500	mRNA	ACA1_128500	NW_004457437.1	72947	73936	R	ACA1_128500	complement(join(<72947..73108,73228..73280,73367..73459,73585..73626,73719..73761,73868..>73936))	Acanthamoeba castellanii str. Neff	14917677
ACA1_128510	mRNA	ACA1_128510	NW_004457437.1	74241	76193	D	ACA1_128510	join(<74241..74426,74518..74949,75084..>76193)	Acanthamoeba castellanii str. Neff	14917655
ACA1_128520	mRNA	ACA1_128520	NW_004457437.1	76693	78248	R	ACA1_128520	complement(join(<76693..76778,76844..77091,77106..77306,77587..77703,77789..77873,78017..>78248))	Acanthamoeba castellanii str. Neff	14917656
ACA1_128530	mRNA	ACA1_128530	NW_004457437.1	79133	80055	D	ACA1_128530	join(<79133..79438,79552..>80055)	Acanthamoeba castellanii str. Neff	14917657
ACA1_128540	mRNA	ACA1_128540	NW_004457437.1	80356	81074	R	ACA1_128540	complement(join(<80356..80470,80558..80747,80829..80913,80940..>81074))	Acanthamoeba castellanii str. Neff	14917658
ACA1_128550	mRNA	ACA1_128550	NW_004457437.1	81835	82332	D	ACA1_128550	join(<81835..82024,82091..>82332)	Acanthamoeba castellanii str. Neff	14917659
ACA1_128560	mRNA	ACA1_128560	NW_004457437.1	86548	89405	R	ACA1_128560	complement(join(<86548..86684,86777..86954,87029..87182,87277..87346,87476..87560,87679..87766,87887..87943,88013..88225,88327..88517,88600..88753,88838..88985,89141..>89405))	Acanthamoeba castellanii str. Neff	14917660
ACA1_128570	mRNA	ACA1_128570	NW_004457437.1	89499	92227	R	ACA1_128570	complement(join(<89499..89706,89811..89974,90063..90310,90433..90603,90673..90733,90824..90925,91042..91143,91216..91324,91405..91555,91613..91755,91808..91891,91979..92058,92138..>92227))	Acanthamoeba castellanii str. Neff	14917661
ACA1_128580	mRNA	ACA1_128580	NW_004457437.1	92474	95137	D	ACA1_128580	join(<92474..92565,92737..92942,93025..93122,93185..93265,93413..93776,94179..94209,94377..94461,94522..94651,94777..94894,94999..>95137)	Acanthamoeba castellanii str. Neff	14917662
ACA1_128690	mRNA	ACA1_128690	NW_004457437.1	97896	98183	R	ACA1_128690	complement(<97896..>98183)	Acanthamoeba castellanii str. Neff	14917663
ACA1_128800	mRNA	ACA1_128800	NW_004457437.1	98699	99650	D	ACA1_128800	join(<98699..98842,98926..99255,99345..>99650)	Acanthamoeba castellanii str. Neff	14917664
ACA1_128810	mRNA	ACA1_128810	NW_004457437.1	100114	102005	R	ACA1_128810	complement(join(<100114..100375,100491..100627,100715..100981,101064..101498,101679..>102005))	Acanthamoeba castellanii str. Neff	14917665
ACA1_128820	mRNA	ACA1_128820	NW_004457437.1	102291	103766	R	ACA1_128820	complement(join(<102291..102421,102480..102587,102642..102753,102820..102961,103020..103132,103220..103540,103620..>103766))	Acanthamoeba castellanii str. Neff	14917690
ACA1_128830	mRNA	ACA1_128830	NW_004457437.1	104191	106101	D	ACA1_128830	join(<104191..104254,104348..104440,104520..104655,104793..104895,104961..105058,105134..105293,105381..105537,105605..>106101)	Acanthamoeba castellanii str. Neff	14917691
ACA1_128840	mRNA	ACA1_128840	NW_004457437.1	107416	108284	D	ACA1_128840	join(<107416..107550,107667..107728,107795..108026,108093..108167,108249..>108284)	Acanthamoeba castellanii str. Neff	14917692
ACA1_128850	mRNA	ACA1_128850	NW_004457437.1	108391	112040	R	ACA1_128850	complement(join(<108391..108631,108724..109435,109456..109844,109930..110148,110249..110405,110486..110660,110759..110919,111056..111269,111383..111694,111903..>112040))	Acanthamoeba castellanii str. Neff	14917693
ACA1_128870	mRNA	ACA1_128870	NW_004457437.1	114183	115101	R	ACA1_128870	complement(join(<114183..114304,114375..114443,114552..114595,114668..>115101))	Acanthamoeba castellanii str. Neff	14917695
ACA1_128980	mRNA	ACA1_128980	NW_004457437.1	115603	115952	R	ACA1_128980	complement(join(<115603..115722,115863..>115952))	Acanthamoeba castellanii str. Neff	14917696
ACA1_128990	mRNA	ACA1_128990	NW_004457437.1	117119	119170	R	ACA1_128990	complement(join(<117119..117428,117486..117708,117816..117918,118018..118179,118281..118453,118590..118725,119018..>119170))	Acanthamoeba castellanii str. Neff	14917697
ACA1_129000	mRNA	ACA1_129000	NW_004457437.1	119918	120984	R	ACA1_129000	complement(join(<119918..120081,120145..120364,120434..120506,120587..120661,120779..120882,120964..>120984))	Acanthamoeba castellanii str. Neff	14917698
ACA1_129010	mRNA	ACA1_129010	NW_004457437.1	121551	124880	R	ACA1_129010	complement(join(<121551..121898,124049..124221,124368..124460,124657..124701,124793..>124880))	Acanthamoeba castellanii str. Neff	14917699
ACA1_049090	mRNA	ACA1_049090	NW_004457436.1	6176	8207	D	ACA1_049090	join(<6176..6284,6526..6566,6702..6988,7073..7179,7294..7475,7559..7834,7930..8010,8109..>8207)	Acanthamoeba castellanii str. Neff	14917654
ACA1_049200	mRNA	ACA1_049200	NW_004457436.1	12386	12761	R	ACA1_049200	complement(join(<12386..12494,12625..>12761))	Acanthamoeba castellanii str. Neff	14917651
ACA1_049210	mRNA	ACA1_049210	NW_004457436.1	15552	16837	R	ACA1_049210	complement(join(<15552..15602,15687..15766,15919..16036,16175..16265,16354..16491,16590..>16837))	Acanthamoeba castellanii str. Neff	14917650
ACA1_049320	mRNA	ACA1_049320	NW_004457436.1	21113	21783	R	ACA1_049320	complement(join(<21113..21185,21354..21522,21714..>21783))	Acanthamoeba castellanii str. Neff	14917652
ACA1_049330	mRNA	ACA1_049330	NW_004457436.1	21908	22251	D	ACA1_049330	join(<21908..22019,22100..>22251)	Acanthamoeba castellanii str. Neff	14917653
ACA1_041740	mRNA	ACA1_041740	NW_004457435.1	160	772	D	ACA1_041740	join(<160..207,289..504,589..663,728..>772)	Acanthamoeba castellanii str. Neff	14917560
ACA1_041750	mRNA	ACA1_041750	NW_004457435.1	911	1697	D	ACA1_041750	join(<911..970,1044..>1697)	Acanthamoeba castellanii str. Neff	14917625
ACA1_041760	mRNA	ACA1_041760	NW_004457435.1	1799	5101	R	ACA1_041760	complement(join(<1799..1927,2137..2312,2388..2484,2580..2666,2796..2969,3056..3133,3219..3715,3783..3876,3951..4021,4112..4499,4586..>5101))	Acanthamoeba castellanii str. Neff	14917626
ACA1_041770	mRNA	ACA1_041770	NW_004457435.1	5610	6442	R	ACA1_041770	complement(join(<5610..5721,5808..5869,6036..6079,6158..6220,6289..>6442))	Acanthamoeba castellanii str. Neff	14917627
ACA1_041780	mRNA	ACA1_041780	NW_004457435.1	6981	8056	D	ACA1_041780	join(<6981..7164,7248..7363,7443..7524,7614..7729,7813..7884,7970..>8056)	Acanthamoeba castellanii str. Neff	14917596
ACA1_041790	mRNA	ACA1_041790	NW_004457435.1	8164	13073	D	ACA1_041790	join(<8164..8598,8755..8970,9097..9245,9319..9399,9536..9644,9731..9902,10048..10258,10349..10430,10513..10607,10658..10850,10973..11125,11213..11299,11402..11533,11623..11697,11773..11934,12073..12191,12292..12396,12528..12651,12742..12909,12981..>13073)	Acanthamoeba castellanii str. Neff	14917597
ACA1_041900	mRNA	ACA1_041900	NW_004457435.1	14286	16501	D	ACA1_041900	join(<14286..14360,14490..14562,14595..14742,14858..14949,15031..15612,15726..15891,16010..16296,16401..>16501)	Acanthamoeba castellanii str. Neff	14917593
ACA1_041910	mRNA	ACA1_041910	NW_004457435.1	16606	19093	R	ACA1_041910	complement(join(<16606..16698,16783..16953,17057..17183,17283..17358,17435..17564,17632..17726,17798..17921,17989..18124,18189..18311,18385..18626,18710..>19093))	Acanthamoeba castellanii str. Neff	14917594
ACA1_041920	mRNA	ACA1_041920	NW_004457435.1	19719	21602	D	ACA1_041920	join(<19719..19828,19899..19948,20068..20123,20226..20319,20414..20605,20710..20846,20917..21000,21089..21277,21364..21447,21534..>21602)	Acanthamoeba castellanii str. Neff	14917595
ACA1_041930	mRNA	ACA1_041930	NW_004457435.1	21711	22331	D	ACA1_041930	join(<21711..21824,21890..21980,22135..22161,22238..>22331)	Acanthamoeba castellanii str. Neff	14917614
ACA1_041940	mRNA	ACA1_041940	NW_004457435.1	22529	23605	D	ACA1_041940	join(<22529..22667,22745..22881,22970..23053,23125..23208,23289..23393,23432..>23605)	Acanthamoeba castellanii str. Neff	14917615
ACA1_041950	mRNA	ACA1_041950	NW_004457435.1	24125	26125	D	ACA1_041950	join(<24125..24252,24320..24375,24460..24515,24715..24805,24937..25131,25223..25356,25438..25605,25682..25786,25882..25968,26054..>26125)	Acanthamoeba castellanii str. Neff	14917616
ACA1_041960	mRNA	ACA1_041960	NW_004457435.1	26461	27382	D	ACA1_041960	join(<26461..26559,26623..26722,26792..26899,26974..27048,27107..27222,27305..>27382)	Acanthamoeba castellanii str. Neff	14917617
ACA1_041970	mRNA	ACA1_041970	NW_004457435.1	28184	29235	D	ACA1_041970	join(<28184..28422,28511..28614,28700..29040,29098..>29235)	Acanthamoeba castellanii str. Neff	14917618
ACA1_041980	mRNA	ACA1_041980	NW_004457435.1	29910	30485	D	ACA1_041980	join(<29910..29928,29954..30058,30138..30236,30301..>30485)	Acanthamoeba castellanii str. Neff	14917619
ACA1_041990	mRNA	ACA1_041990	NW_004457435.1	30611	32548	R	ACA1_041990	complement(join(<30611..31142,31300..31419,31510..31603,31741..31840,31942..32020,32134..32222,32303..>32548))	Acanthamoeba castellanii str. Neff	14917620
ACA1_042000	mRNA	ACA1_042000	NW_004457435.1	32596	33358	D	ACA1_042000	join(<32596..32601,32869..33027,33108..33212,33287..>33358)	Acanthamoeba castellanii str. Neff	14917621
ACA1_042010	mRNA	ACA1_042010	NW_004457435.1	33568	35800	R	ACA1_042010	complement(join(<33568..33738,33841..33965,34075..34147,34219..34304,34376..34484,34577..34625,34692..34740,34827..34898,35049..35172,35265..35360,35437..35508,35576..35663,35730..>35800))	Acanthamoeba castellanii str. Neff	14917622
ACA1_042020	mRNA	ACA1_042020	NW_004457435.1	36311	39981	R	ACA1_042020	complement(join(<36311..36400,36479..36550,36670..36731,36833..36938,37047..37138,37197..37286,37370..37428,37518..37594,37675..37723,37824..37907,38026..38087,38219..38283,38360..38417,38503..38585,38656..38743,38790..39099,39158..39379,39454..39497,39589..39637,39719..39783,39895..>39981))	Acanthamoeba castellanii str. Neff	14917623
ACA1_042030	mRNA	ACA1_042030	NW_004457435.1	40822	43440	D	ACA1_042030	join(<40822..41065,41189..41336,41419..41511,41595..41655,41767..41886,41961..42053,42139..42207,42372..42476,42583..42644,42769..43072,43168..43229,43338..>43440)	Acanthamoeba castellanii str. Neff	14917624
ACA1_042040	mRNA	ACA1_042040	NW_004457435.1	43712	45878	R	ACA1_042040	complement(join(<43712..43928,44065..44117,44206..44273,44357..44498,44577..44608,44709..44825,44930..45112,45184..45263,45340..45488,45593..45656,45715..>45878))	Acanthamoeba castellanii str. Neff	14917580
ACA1_042070	mRNA	ACA1_042070	NW_004457435.1	50840	54166	D	ACA1_042070	join(<50840..50864,50934..50971,51057..51209,51301..51434,51505..51538,51617..51735,51805..51851,52053..52134,52227..52272,52369..52430,52480..52540,52617..52710,52804..52956,53031..53114,53202..53268,53353..53400,53503..53567,53675..53726,53834..53936,54011..>54166)	Acanthamoeba castellanii str. Neff	14917583
ACA1_042080	mRNA	ACA1_042080	NW_004457435.1	54255	54473	R	ACA1_042080	complement(<54255..>54473)	Acanthamoeba castellanii str. Neff	14917584
ACA1_042090	mRNA	ACA1_042090	NW_004457435.1	54839	55958	D	ACA1_042090	join(<54839..54912,54955..55225,55436..55521,55588..55745,55840..>55958)	Acanthamoeba castellanii str. Neff	14917585
ACA1_042210	mRNA	ACA1_042210	NW_004457435.1	56887	59861	D	ACA1_042210	join(<56887..57293,57454..58820,58895..59254,59338..59645,59760..>59861)	Acanthamoeba castellanii str. Neff	14917587
ACA1_042220	mRNA	ACA1_042220	NW_004457435.1	60089	61778	R	ACA1_042220	complement(join(<60089..60185,60242..60619,60688..60804,61002..61104,61168..61267,61334..61608,61673..>61778))	Acanthamoeba castellanii str. Neff	14917588
ACA1_042230	mRNA	ACA1_042230	NW_004457435.1	62367	63836	D	ACA1_042230	<62367..>63836	Acanthamoeba castellanii str. Neff	14917589
ACA1_042240	mRNA	ACA1_042240	NW_004457435.1	63957	67809	R	ACA1_042240	complement(join(<63957..64031,64048..65037,65135..66700,66807..66868,66998..67076,67162..67296,67408..67568,67641..>67809))	Acanthamoeba castellanii str. Neff	14917590
ACA1_042250	mRNA	ACA1_042250	NW_004457435.1	68777	71298	R	ACA1_042250	complement(join(<68777..69303,69402..69481,69558..69790,69863..69959,70029..70122,70206..70374,70453..70535,70614..70694,70776..70875,71047..>71298))	Acanthamoeba castellanii str. Neff	14917591
ACA1_042260	mRNA	ACA1_042260	NW_004457435.1	71725	73046	D	ACA1_042260	join(<71725..71835,72044..72466,72552..72870,72922..>73046)	Acanthamoeba castellanii str. Neff	14917592
ACA1_042270	mRNA	ACA1_042270	NW_004457435.1	73126	74482	R	ACA1_042270	complement(join(<73126..73190,73247..73324,73383..73716,73795..74276,74338..>74482))	Acanthamoeba castellanii str. Neff	14917598
ACA1_042280	mRNA	ACA1_042280	NW_004457435.1	74819	76839	R	ACA1_042280	complement(join(<74819..74884,74979..75047,75138..75201,75294..75376,75442..75514,75641..75774,75853..75879,75950..76077,76169..76325,76471..76586,76599..>76839))	Acanthamoeba castellanii str. Neff	14917599
ACA1_042300	mRNA	ACA1_042300	NW_004457435.1	81024	81453	R	ACA1_042300	complement(join(<81024..81094,81165..>81453))	Acanthamoeba castellanii str. Neff	14917601
ACA1_042310	mRNA	ACA1_042310	NW_004457435.1	82088	84968	R	ACA1_042310	complement(join(<82088..82658,82765..82949,83057..83215,83345..83469,83601..83704,83774..83896,84087..84195,84287..84330,84433..84585,84709..>84968))	Acanthamoeba castellanii str. Neff	14917602
ACA1_042320	mRNA	ACA1_042320	NW_004457435.1	85131	85922	R	ACA1_042320	complement(join(<85131..85241,85338..85492,85619..>85922))	Acanthamoeba castellanii str. Neff	14917603
ACA1_042330	mRNA	ACA1_042330	NW_004457435.1	86067	87065	D	ACA1_042330	join(<86067..86185,86269..86485,86561..86746,86907..>87065)	Acanthamoeba castellanii str. Neff	14917604
ACA1_042340	mRNA	ACA1_042340	NW_004457435.1	86405	87836	R	ACA1_042340	complement(join(<86405..86740,87225..87398,87459..>87836))	Acanthamoeba castellanii str. Neff	14917605
ACA1_042450	mRNA	ACA1_042450	NW_004457435.1	89303	89707	R	ACA1_042450	complement(<89303..>89707)	Acanthamoeba castellanii str. Neff	14917606
ACA1_042560	mRNA	ACA1_042560	NW_004457435.1	89953	90312	D	ACA1_042560	<89953..>90312	Acanthamoeba castellanii str. Neff	14917607
ACA1_042670	mRNA	ACA1_042670	NW_004457435.1	91728	92411	D	ACA1_042670	join(<91728..91849,91951..92145,92240..>92411)	Acanthamoeba castellanii str. Neff	14917608
ACA1_042680	mRNA	ACA1_042680	NW_004457435.1	92574	93581	R	ACA1_042680	complement(join(<92574..92710,92824..92899,93060..93216,93298..>93581))	Acanthamoeba castellanii str. Neff	14917609
ACA1_042690	mRNA	ACA1_042690	NW_004457435.1	94175	95101	D	ACA1_042690	join(<94175..94234,94313..94395,94482..94620,94699..94919,95083..>95101)	Acanthamoeba castellanii str. Neff	14917610
ACA1_042800	mRNA	ACA1_042800	NW_004457435.1	97550	100843	R	ACA1_042800	complement(join(<97550..97572,97592..98445,98571..98623,98740..98820,98894..99032,99124..99303,99419..99609,99706..99851,99950..100055,100138..100313,100384..100619,100691..>100843))	Acanthamoeba castellanii str. Neff	14917611
ACA1_042810	mRNA	ACA1_042810	NW_004457435.1	100856	101401	R	ACA1_042810	complement(join(<100856..100998,101020..101121,101254..>101401))	Acanthamoeba castellanii str. Neff	14917612
ACA1_042820	mRNA	ACA1_042820	NW_004457435.1	101935	103283	R	ACA1_042820	complement(join(<101935..101978,102077..102380,102423..>103283))	Acanthamoeba castellanii str. Neff	14917613
ACA1_042830	mRNA	ACA1_042830	NW_004457435.1	103300	103937	R	ACA1_042830	complement(join(<103300..103575,103689..>103937))	Acanthamoeba castellanii str. Neff	14917628
ACA1_042840	mRNA	ACA1_042840	NW_004457435.1	104393	105749	D	ACA1_042840	join(<104393..104456,104965..>105749)	Acanthamoeba castellanii str. Neff	14917629
ACA1_042850	mRNA	ACA1_042850	NW_004457435.1	106093	111138	D	ACA1_042850	join(<106093..106136,106154..106349,106463..108070,108267..108421,108734..108812,108937..109596,109864..>111138)	Acanthamoeba castellanii str. Neff	14917630
ACA1_042860	mRNA	ACA1_042860	NW_004457435.1	111504	113421	D	ACA1_042860	join(<111504..111680,111776..111825,111894..112030,112133..112264,112420..112516,112718..112787,112903..112971,113102..113176,113260..>113421)	Acanthamoeba castellanii str. Neff	14917631
ACA1_042870	mRNA	ACA1_042870	NW_004457435.1	113578	116447	R	ACA1_042870	complement(join(<113578..113797,114067..114170,114259..114529,114630..114771,114872..115230,115338..115438,115575..115700,115821..116061,116209..>116447))	Acanthamoeba castellanii str. Neff	14917632
ACA1_042880	mRNA	ACA1_042880	NW_004457435.1	117062	117609	D	ACA1_042880	join(<117062..117352,117541..>117609)	Acanthamoeba castellanii str. Neff	14917633
ACA1_042990	mRNA	ACA1_042990	NW_004457435.1	117606	118009	R	ACA1_042990	complement(join(<117606..117825,117915..>118009))	Acanthamoeba castellanii str. Neff	14917634
ACA1_043100	mRNA	ACA1_043100	NW_004457435.1	118937	120473	R	ACA1_043100	complement(join(<118937..119276,119366..119466,119605..119730,119858..120098,120235..>120473))	Acanthamoeba castellanii str. Neff	14917635
ACA1_043110	mRNA	ACA1_043110	NW_004457435.1	120955	122397	D	ACA1_043110	join(<120955..121759,121815..122006,122079..122256,122331..>122397)	Acanthamoeba castellanii str. Neff	14917636
ACA1_043120	mRNA	ACA1_043120	NW_004457435.1	122553	125563	R	ACA1_043120	complement(join(<122553..122759,122859..123001,123104..123245,123319..123420,123519..123599,123696..123849,123956..124161,124263..124358,124493..124610,124719..124839,124908..124997,125094..125189,125280..125384,125455..>125563))	Acanthamoeba castellanii str. Neff	14917637
ACA1_043130	mRNA	ACA1_043130	NW_004457435.1	125685	126323	R	ACA1_043130	complement(join(<125685..125792,125857..125902,125977..126077,126174..>126323))	Acanthamoeba castellanii str. Neff	14917638
ACA1_043140	mRNA	ACA1_043140	NW_004457435.1	126512	129003	R	ACA1_043140	complement(join(<126512..126729,126789..126915,127023..127229,127355..127441,127538..127624,127705..127872,127983..128078,128158..128369,128457..128561,128653..128691,128772..>129003))	Acanthamoeba castellanii str. Neff	14917639
ACA1_043150	mRNA	ACA1_043150	NW_004457435.1	129532	133166	R	ACA1_043150	complement(join(<129532..129606,129754..129820,129910..130391,130448..130528,130626..130724,130801..130977,131076..131236,131315..131364,131450..131517,131607..131791,131879..132301,132392..>133166))	Acanthamoeba castellanii str. Neff	14917640
ACA1_043160	mRNA	ACA1_043160	NW_004457435.1	133354	134871	D	ACA1_043160	join(<133354..133486,133565..133683,133794..133864,133933..134002,134082..134181,134383..134486,134522..134551,134785..>134871)	Acanthamoeba castellanii str. Neff	14917641
ACA1_043170	mRNA	ACA1_043170	NW_004457435.1	134975	135219	R	ACA1_043170	complement(join(<134975..135058,135130..>135219))	Acanthamoeba castellanii str. Neff	14917642
ACA1_043180	mRNA	ACA1_043180	NW_004457435.1	135596	136597	D	ACA1_043180	join(<135596..135721,135805..136234,136335..>136597)	Acanthamoeba castellanii str. Neff	14917643
ACA1_043190	mRNA	ACA1_043190	NW_004457435.1	136675	137412	R	ACA1_043190	complement(join(<136675..136795,136871..137070,137139..137290,137394..>137412))	Acanthamoeba castellanii str. Neff	14917644
ACA1_043200	mRNA	ACA1_043200	NW_004457435.1	137694	138187	R	ACA1_043200	complement(join(<137694..137786,137869..138025,138093..>138187))	Acanthamoeba castellanii str. Neff	14917645
ACA1_043210	mRNA	ACA1_043210	NW_004457435.1	138907	139116	R	ACA1_043210	complement(<138907..>139116)	Acanthamoeba castellanii str. Neff	14917646
ACA1_043220	mRNA	ACA1_043220	NW_004457435.1	139549	141224	R	ACA1_043220	complement(join(<139549..139871,139933..140094,140240..140338,140443..140568,140671..141040,141126..>141224))	Acanthamoeba castellanii str. Neff	14917647
ACA1_043230	mRNA	ACA1_043230	NW_004457435.1	141693	143373	R	ACA1_043230	complement(join(<141693..141698,141734..141814,141884..141988,142056..142171,142263..142547,142615..142705,142767..142817,142897..142962,143115..143166,143237..>143373))	Acanthamoeba castellanii str. Neff	14917648
ACA1_043240	mRNA	ACA1_043240	NW_004457435.1	143545	144363	R	ACA1_043240	complement(join(<143545..143571,143610..143717,143828..143902,143962..144156,144250..>144363))	Acanthamoeba castellanii str. Neff	14917649
ACA1_043250	mRNA	ACA1_043250	NW_004457435.1	145610	147050	D	ACA1_043250	join(<145610..145712,145809..145990,146077..146193,146316..146421,146519..146620,146706..146837,146917..>147050)	Acanthamoeba castellanii str. Neff	14917561
ACA1_043260	mRNA	ACA1_043260	NW_004457435.1	147160	150585	R	ACA1_043260	complement(join(<147160..147264,147348..147461,147615..147682,147799..147917,148013..148141,148228..148366,148457..148575,148660..148786,148859..149036,149107..149280,149364..149453,149531..149616,149713..149794,149868..149944,150056..150161,150307..>150585))	Acanthamoeba castellanii str. Neff	14917562
ACA1_043270	mRNA	ACA1_043270	NW_004457435.1	151043	152097	R	ACA1_043270	complement(join(<151043..151114,151203..151303,151421..151514,151632..151700,151790..151930,152050..>152097))	Acanthamoeba castellanii str. Neff	14917563
ACA1_043280	mRNA	ACA1_043280	NW_004457435.1	152589	156366	R	ACA1_043280	complement(join(<152589..152767,152864..153038,153115..153190,153299..153374,153480..153596,153677..153785,153895..153983,154064..154127,154210..154317,154420..154483,154570..154647,154737..154807,154932..155869,155985..>156366))	Acanthamoeba castellanii str. Neff	14917564
ACA1_043290	mRNA	ACA1_043290	NW_004457435.1	157126	157785	D	ACA1_043290	<157126..>157785	Acanthamoeba castellanii str. Neff	14917565
ACA1_043300	mRNA	ACA1_043300	NW_004457435.1	158055	162013	D	ACA1_043300	join(<158055..158178,158445..158593,158693..158917,159014..159084,159219..159242,159324..159471,159571..159634,159725..159811,159886..159959,160087..160187,160269..160314,160461..160535,160652..160728,160830..161172,161244..161366,161572..161665,161764..161832,161919..>162013)	Acanthamoeba castellanii str. Neff	14917566
ACA1_043310	mRNA	ACA1_043310	NW_004457435.1	162138	162939	R	ACA1_043310	complement(join(<162138..162450,162564..162682,162835..>162939))	Acanthamoeba castellanii str. Neff	14917567
ACA1_043320	mRNA	ACA1_043320	NW_004457435.1	163782	165115	D	ACA1_043320	join(<163782..163884,163985..164160,164250..164469,164554..164658,164731..164865,164979..>165115)	Acanthamoeba castellanii str. Neff	14917568
ACA1_043330	mRNA	ACA1_043330	NW_004457435.1	165184	165455	R	ACA1_043330	complement(join(<165184..165280,165358..>165455))	Acanthamoeba castellanii str. Neff	14917569
ACA1_043340	mRNA	ACA1_043340	NW_004457435.1	165745	167709	D	ACA1_043340	join(<165745..165843,165953..166036,166141..166299,166505..166654,166853..167032,167113..167225,167360..167436,167528..>167709)	Acanthamoeba castellanii str. Neff	14917570
ACA1_043350	mRNA	ACA1_043350	NW_004457435.1	167812	169513	D	ACA1_043350	join(<167812..168004,168219..168365,168503..168691,168806..168904,169049..169182,169252..169329,169448..>169513)	Acanthamoeba castellanii str. Neff	14917571
ACA1_043360	mRNA	ACA1_043360	NW_004457435.1	169648	173738	R	ACA1_043360	complement(join(<169648..169756,169882..170130,170237..170396,170498..170645,170739..170930,171018..171137,171251..171412,171530..171628,171914..172002,172129..172216,172301..172363,172520..172590,172666..172715,172806..172831,172943..173047,173388..>173738))	Acanthamoeba castellanii str. Neff	14917572
ACA1_043570	mRNA	ACA1_043570	NW_004457435.1	174027	175431	D	ACA1_043570	join(<174027..174135,174200..174319,174403..174550,174682..174848,174996..175177,175294..>175431)	Acanthamoeba castellanii str. Neff	14917573
ACA1_043580	mRNA	ACA1_043580	NW_004457435.1	175923	179266	R	ACA1_043580	complement(join(<175923..176057,176145..176252,176413..176511,176632..176819,176923..177040,177148..177236,177369..177456,177541..177603,177751..177821,177898..177947,178042..178067,178185..178723,178826..178911,179037..179170,179234..>179266))	Acanthamoeba castellanii str. Neff	14917574
ACA1_043590	mRNA	ACA1_043590	NW_004457435.1	180526	181140	R	ACA1_043590	complement(join(<180526..180594,180697..180806,180883..180998,181082..>181140))	Acanthamoeba castellanii str. Neff	14917575
ACA1_043600	mRNA	ACA1_043600	NW_004457435.1	181489	182276	R	ACA1_043600	complement(join(<181489..181708,181793..181911,181980..182107,182216..>182276))	Acanthamoeba castellanii str. Neff	14917576
ACA1_043610	mRNA	ACA1_043610	NW_004457435.1	182384	184825	R	ACA1_043610	complement(join(<182384..182815,183012..183065,183096..183233,183394..183520,183617..183709,183813..183936,184025..184100,184178..184249,184458..184596,184719..>184825))	Acanthamoeba castellanii str. Neff	14917577
ACA1_043620	mRNA	ACA1_043620	NW_004457435.1	185437	186312	D	ACA1_043620	join(<185437..185684,185813..185905,186003..186120,186244..>186312)	Acanthamoeba castellanii str. Neff	14917578
ACA1_043630	mRNA	ACA1_043630	NW_004457435.1	186372	188514	D	ACA1_043630	join(<186372..186614,186815..186902,186974..187041,187111..187182,187203..187232,187331..187401,187486..187622,187707..187912,188054..188230,188341..>188514)	Acanthamoeba castellanii str. Neff	14917579
ACA1_043640	mRNA	ACA1_043640	NW_004457435.1	188679	191370	D	ACA1_043640	join(<188679..188925,189061..189187,189305..189383,189486..189570,189671..189766,189901..190085,190179..190234,190357..190479,190557..190649,190728..190816,190891..191058,191180..>191370)	Acanthamoeba castellanii str. Neff	14917556
ACA1_043650	mRNA	ACA1_043650	NW_004457435.1	191458	193818	R	ACA1_043650	complement(join(<191458..191600,191769..191936,192006..192319,192423..192478,192574..192650,192822..192923,193029..193209,193335..193413,193507..193636,193767..>193818))	Acanthamoeba castellanii str. Neff	14917557
ACA1_043660	mRNA	ACA1_043660	NW_004457435.1	194511	197394	D	ACA1_043660	join(<194511..194790,194853..194992,195083..195248,195389..195487,195580..195716,195803..195938,196056..196188,196280..196412,196532..196664,196732..196999,197076..>197394)	Acanthamoeba castellanii str. Neff	14917558
ACA1_043670	mRNA	ACA1_043670	NW_004457435.1	197433	204225	D	ACA1_043670	join(<197433..197472,197556..197630,197748..197840,197931..198014,198090..198202,198358..198405,198497..198595,198673..199075,199164..199329,199420..199487,199567..199658,199771..199869,199961..199988,200000..200121,200192..200258,200426..200499,200581..200817,200932..201113,201251..201363,201473..201598,201671..201862,201993..202073,202174..202274,202653..202761,202891..202977,203099..203237,203348..203539,203622..203968,204080..>204225)	Acanthamoeba castellanii str. Neff	14917559
ACA1_382080	mRNA	ACA1_382080	NW_004457434.1	555	1387	R	ACA1_382080	complement(join(<555..614,722..784,872..964,1086..1129,1185..1205,1306..>1387))	Acanthamoeba castellanii str. Neff	14917550
ACA1_382090	mRNA	ACA1_382090	NW_004457434.1	1697	1974	D	ACA1_382090	join(<1697..1850,1922..>1974)	Acanthamoeba castellanii str. Neff	14917505
ACA1_382100	mRNA	ACA1_382100	NW_004457434.1	2051	2965	R	ACA1_382100	complement(join(<2051..2298,2378..2525,2622..2709,2790..>2965))	Acanthamoeba castellanii str. Neff	14917551
ACA1_382110	mRNA	ACA1_382110	NW_004457434.1	3182	3955	R	ACA1_382110	complement(join(<3182..3303,3416..3503,3610..3850,3927..>3955))	Acanthamoeba castellanii str. Neff	14917552
ACA1_382120	mRNA	ACA1_382120	NW_004457434.1	4648	5619	D	ACA1_382120	join(<4648..4686,4768..4842,5022..5329,5562..>5619)	Acanthamoeba castellanii str. Neff	14917553
ACA1_382130	mRNA	ACA1_382130	NW_004457434.1	6221	7515	D	ACA1_382130	join(<6221..6275,6365..6428,6564..6704,6716..6842,7004..7138,7208..7273,7357..>7515)	Acanthamoeba castellanii str. Neff	14917554
ACA1_382140	mRNA	ACA1_382140	NW_004457434.1	8002	9553	D	ACA1_382140	join(<8002..8030,8182..8302,8490..8636,8726..8836,9009..9115,9256..9375,9532..>9553)	Acanthamoeba castellanii str. Neff	14917555
ACA1_382250	mRNA	ACA1_382250	NW_004457434.1	9584	12471	R	ACA1_382250	complement(join(<9584..9758,9849..10130,10243..10338,10405..10471,10586..10704,10825..10931,11020..11075,11144..11238,11324..11449,11546..11630,11847..11915,12036..12120,12374..>12471))	Acanthamoeba castellanii str. Neff	14917471
ACA1_382260	mRNA	ACA1_382260	NW_004457434.1	12680	13999	R	ACA1_382260	complement(join(<12680..12852,12951..13506,13610..>13999))	Acanthamoeba castellanii str. Neff	14917472
ACA1_382270	mRNA	ACA1_382270	NW_004457434.1	14476	19380	R	ACA1_382270	complement(join(<14476..14556,14690..14827,14893..15007,15098..15803,15893..16074,16171..16317,16441..17649,17672..17748,17833..17965,18050..18197,18277..18369,18457..18643,18740..18879,19079..19199,19297..>19380))	Acanthamoeba castellanii str. Neff	14917473
ACA1_382280	mRNA	ACA1_382280	NW_004457434.1	20154	21982	R	ACA1_382280	complement(join(<20154..20240,20325..20453,20573..20831,20948..21020,21084..21291,21370..21587,21655..21774,21841..>21982))	Acanthamoeba castellanii str. Neff	14917474
ACA1_382290	mRNA	ACA1_382290	NW_004457434.1	23006	23721	D	ACA1_382290	join(<23006..23065,23182..23274,23347..23414,23497..23618,23681..>23721)	Acanthamoeba castellanii str. Neff	14917475
ACA1_382300	mRNA	ACA1_382300	NW_004457434.1	24823	27022	D	ACA1_382300	join(<24823..24976,25194..25422,25459..26560,26606..>27022)	Acanthamoeba castellanii str. Neff	14917476
ACA1_382310	mRNA	ACA1_382310	NW_004457434.1	27550	28291	R	ACA1_382310	complement(join(<27550..27592,27716..27872,27966..28026,28090..28115,28222..>28291))	Acanthamoeba castellanii str. Neff	14917477
ACA1_382330	mRNA	ACA1_382330	NW_004457434.1	29798	30572	R	ACA1_382330	complement(join(<29798..29837,29920..29991,30098..30230,30434..>30572))	Acanthamoeba castellanii str. Neff	14917479
ACA1_382340	mRNA	ACA1_382340	NW_004457434.1	33164	33421	D	ACA1_382340	<33164..>33421	Acanthamoeba castellanii str. Neff	14917480
ACA1_382350	mRNA	ACA1_382350	NW_004457434.1	34904	36945	R	ACA1_382350	complement(join(<34904..36281,36387..36494,36558..36647,36887..>36945))	Acanthamoeba castellanii str. Neff	14917481
ACA1_382360	mRNA	ACA1_382360	NW_004457434.1	37754	38560	D	ACA1_382360	join(<37754..37875,37973..38176,38269..38388,38458..>38560)	Acanthamoeba castellanii str. Neff	14917482
ACA1_382370	mRNA	ACA1_382370	NW_004457434.1	38878	43378	R	ACA1_382370	complement(join(<38878..39078,39180..39410,39510..39719,39867..39961,40077..40175,40302..40526,40614..40814,40982..41104,41184..41319,41419..41495,41615..41699,41823..42005,42086..42250,42321..42433,42471..42663,42749..42876,42985..43174,43304..>43378))	Acanthamoeba castellanii str. Neff	14917483
ACA1_382380	mRNA	ACA1_382380	NW_004457434.1	44088	47074	D	ACA1_382380	join(<44088..44150,44270..44374,44441..44688,44813..44910,44990..45110,45217..45368,45449..45527,45613..45685,45776..45874,45945..46028,46108..46149,46236..46296,46395..>47074)	Acanthamoeba castellanii str. Neff	14917484
ACA1_382390	mRNA	ACA1_382390	NW_004457434.1	47452	51468	D	ACA1_382390	join(<47452..47580,47719..47792,47871..47955,48033..48227,48325..48538,48637..48797,48916..49084,49194..49350,49438..49656,49773..50010,50098..50822,50901..>51468)	Acanthamoeba castellanii str. Neff	14917495
ACA1_382400	mRNA	ACA1_382400	NW_004457434.1	51565	55388	R	ACA1_382400	complement(join(<51565..51712,51811..51955,52034..52249,52402..52636,52756..52899,52999..53144,53250..53362,53454..53595,53710..53881,53955..54148,54351..54537,54635..54722,54883..55044,55127..55250,55343..>55388))	Acanthamoeba castellanii str. Neff	14917496
ACA1_382510	mRNA	ACA1_382510	NW_004457434.1	57953	60493	D	ACA1_382510	join(<57953..58048,58111..58485,58571..59102,59333..59861,60211..>60493)	Acanthamoeba castellanii str. Neff	14917497
ACA1_382520	mRNA	ACA1_382520	NW_004457434.1	60561	62058	D	ACA1_382520	join(<60561..60675,60787..60947,61034..61129,61221..61306,61427..61619,61722..61858,61926..>62058)	Acanthamoeba castellanii str. Neff	14917498
ACA1_382530	mRNA	ACA1_382530	NW_004457434.1	62337	66140	D	ACA1_382530	join(<62337..62515,62766..62928,63005..63085,63169..63344,63421..63737,63857..64034,64135..64324,64399..64499,64631..64886,64964..65032,65169..65289,65443..65698,65773..65930,66031..>66140)	Acanthamoeba castellanii str. Neff	14917499
ACA1_382540	mRNA	ACA1_382540	NW_004457434.1	66240	69919	R	ACA1_382540	complement(join(<66240..67053,67233..67417,67536..67630,67728..67796,67923..67970,68160..69523,69669..>69919))	Acanthamoeba castellanii str. Neff	14917500
ACA1_382550	mRNA	ACA1_382550	NW_004457434.1	70262	71054	D	ACA1_382550	join(<70262..70367,70430..70485,70597..70755,70867..70936,71005..>71054)	Acanthamoeba castellanii str. Neff	14917501
ACA1_382570	mRNA	ACA1_382570	NW_004457434.1	75068	75974	D	ACA1_382570	join(<75068..75187,75386..75451,75520..75642,75822..>75974)	Acanthamoeba castellanii str. Neff	14917503
ACA1_382580	mRNA	ACA1_382580	NW_004457434.1	76120	78470	D	ACA1_382580	join(<76120..76219,76426..76627,76715..76768,76858..76909,76995..77104,77184..77280,77372..77714,77841..78043,78118..78183,78264..>78470)	Acanthamoeba castellanii str. Neff	14917504
ACA1_382590	mRNA	ACA1_382590	NW_004457434.1	79131	80985	R	ACA1_382590	complement(join(<79131..79390,79461..79717,79770..79789,79898..80058,80112..80285,80349..80485,80561..>80985))	Acanthamoeba castellanii str. Neff	14917485
ACA1_382600	mRNA	ACA1_382600	NW_004457434.1	81128	81369	R	ACA1_382600	complement(join(<81128..81333,81351..>81369))	Acanthamoeba castellanii str. Neff	14917486
ACA1_382610	mRNA	ACA1_382610	NW_004457434.1	81681	85621	R	ACA1_382610	complement(join(<81681..81883,82015..82871,83023..83378,83534..83801,83960..84241,84326..84488,84639..84897,85054..85169,85321..85411,85502..>85621))	Acanthamoeba castellanii str. Neff	14917487
ACA1_382620	mRNA	ACA1_382620	NW_004457434.1	86048	87593	D	ACA1_382620	join(<86048..86314,86396..86613,86696..86972,87064..87263,87464..>87593)	Acanthamoeba castellanii str. Neff	14917488
ACA1_382630	mRNA	ACA1_382630	NW_004457434.1	87766	90340	R	ACA1_382630	complement(join(<87766..87972,88097..88162,88236..88438,88555..88603,88698..88817,88937..89089,89197..89293,89384..89493,89604..89655,89764..89817,89942..90143,90247..>90340))	Acanthamoeba castellanii str. Neff	14917489
ACA1_382640	mRNA	ACA1_382640	NW_004457434.1	90667	95293	D	ACA1_382640	join(<90667..90786,90897..90987,91121..91236,91374..91632,91808..91970,92072..92353,92832..93099,93254..93621,93778..94025,94137..94859,95091..>95293)	Acanthamoeba castellanii str. Neff	14917490
ACA1_382650	mRNA	ACA1_382650	NW_004457434.1	95764	96829	D	ACA1_382650	join(<95764..95821,95944..96014,96088..96466,96627..>96829)	Acanthamoeba castellanii str. Neff	14917491
ACA1_382660	mRNA	ACA1_382660	NW_004457434.1	96950	98916	D	ACA1_382660	join(<96950..97371,97509..97585,97646..97773,97939..98052,98134..98464,98604..98783,98885..>98916)	Acanthamoeba castellanii str. Neff	14917492
ACA1_382670	mRNA	ACA1_382670	NW_004457434.1	99068	108458	R	ACA1_382670	complement(join(<99068..99484,99496..99585,99687..100202,100869..100912,100995..101063,101294..101437,101554..101691,101799..101914,102031..102220,102293..102350,102416..102468,103040..103598,103718..104230,104747..104790,104870..104938,105102..105245,105362..105499,105667..105724,105790..105849,105922..106020,106218..106289,106367..106456,106529..106626,106710..106782,106867..106935,106998..107081,107193..107251,107314..107399,107461..107599,107703..108239,108305..>108458))	Acanthamoeba castellanii str. Neff	14917493
ACA1_382880	mRNA	ACA1_382880	NW_004457434.1	108835	109710	R	ACA1_382880	complement(<108835..>109710)	Acanthamoeba castellanii str. Neff	14917494
ACA1_382890	mRNA	ACA1_382890	NW_004457434.1	110512	111662	D	ACA1_382890	join(<110512..110756,110846..>111662)	Acanthamoeba castellanii str. Neff	14917507
ACA1_382900	mRNA	ACA1_382900	NW_004457434.1	111713	112579	R	ACA1_382900	complement(join(<111713..112026,112111..112168,112291..112394,112495..>112579))	Acanthamoeba castellanii str. Neff	14917508
ACA1_382910	mRNA	ACA1_382910	NW_004457434.1	113423	117518	D	ACA1_382910	join(<113423..113584,113709..113906,113986..114106,114342..114507,114565..114663,114738..114913,115016..115146,115213..115419,115523..115804,115887..116070,116188..116303,116424..>117518)	Acanthamoeba castellanii str. Neff	14917509
ACA1_382920	mRNA	ACA1_382920	NW_004457434.1	118211	120755	R	ACA1_382920	complement(join(<118211..118413,118509..118628,118728..118910,118984..119112,119199..119288,119371..119536,119613..119768,119852..120003,120077..120156,120228..120334,120417..120592,120665..>120755))	Acanthamoeba castellanii str. Neff	14917510
ACA1_382930	mRNA	ACA1_382930	NW_004457434.1	121113	121730	R	ACA1_382930	complement(join(<121113..121177,121257..121452,121529..121645,121728..>121730))	Acanthamoeba castellanii str. Neff	14917511
ACA1_383050	mRNA	ACA1_383050	NW_004457434.1	126014	133150	D	ACA1_383050	join(<126014..126090,126214..126265,126378..126482,126562..126717,126840..126988,127083..127287,127388..127451,127559..127708,127801..127853,127914..128052,128138..128175,128271..128513,128606..129010,129167..129254,129325..129419,129443..129538,129612..129727,129859..130024,130109..130206,130298..130435,130503..130654,130764..130908,131003..131168,131252..131482,131565..131682,131792..132036,132076..132217,132309..132442,132560..132774,132860..133015,133108..>133150)	Acanthamoeba castellanii str. Neff	14917513
ACA1_383060	mRNA	ACA1_383060	NW_004457434.1	133230	134210	D	ACA1_383060	join(<133230..133477,133861..134017,134124..>134210)	Acanthamoeba castellanii str. Neff	14917514
ACA1_383070	mRNA	ACA1_383070	NW_004457434.1	134494	136087	D	ACA1_383070	join(<134494..134695,134775..134923,134998..135091,135160..135229,135248..135449,135597..135668,135739..135825,135917..>136087)	Acanthamoeba castellanii str. Neff	14917515
ACA1_383080	mRNA	ACA1_383080	NW_004457434.1	136362	137490	D	ACA1_383080	join(<136362..136480,136562..136749,136817..137004,137104..>137490)	Acanthamoeba castellanii str. Neff	14917516
ACA1_383090	mRNA	ACA1_383090	NW_004457434.1	137394	139806	R	ACA1_383090	complement(join(<137394..137442,137456..137498,137611..137751,137826..137942,138046..138234,138388..138513,138793..138925,139007..139162,139235..139475,139572..139633,139744..>139806))	Acanthamoeba castellanii str. Neff	14917517
ACA1_383100	mRNA	ACA1_383100	NW_004457434.1	139928	141468	D	ACA1_383100	join(<139928..140154,140232..140290,140385..140527,140659..140987,141062..141138,141212..>141468)	Acanthamoeba castellanii str. Neff	14917518
ACA1_383110	mRNA	ACA1_383110	NW_004457434.1	141554	142147	R	ACA1_383110	complement(<141554..>142147)	Acanthamoeba castellanii str. Neff	14917519
ACA1_383120	mRNA	ACA1_383120	NW_004457434.1	142523	144780	R	ACA1_383120	complement(join(<142523..143905,143996..144176,144344..>144780))	Acanthamoeba castellanii str. Neff	14917520
ACA1_383130	mRNA	ACA1_383130	NW_004457434.1	145839	146544	R	ACA1_383130	complement(join(<145839..145847,145862..145923,146025..>146544))	Acanthamoeba castellanii str. Neff	14917521
ACA1_383140	mRNA	ACA1_383140	NW_004457434.1	147193	150175	D	ACA1_383140	join(<147193..147360,147474..147563,147643..149712,149831..>150175)	Acanthamoeba castellanii str. Neff	14917522
ACA1_383150	mRNA	ACA1_383150	NW_004457434.1	150109	151146	R	ACA1_383150	complement(join(<150109..150120,150253..>151146))	Acanthamoeba castellanii str. Neff	14917523
ACA1_383160	mRNA	ACA1_383160	NW_004457434.1	151406	154087	D	ACA1_383160	join(<151406..151460,151530..151752,151834..151887,153709..>154087)	Acanthamoeba castellanii str. Neff	14917524
ACA1_383370	mRNA	ACA1_383370	NW_004457434.1	155908	156953	D	ACA1_383370	join(<155908..155983,156051..156091,156160..156222,156295..156474,156553..156606,156678..>156953)	Acanthamoeba castellanii str. Neff	14917525
ACA1_383380	mRNA	ACA1_383380	NW_004457434.1	157086	159421	D	ACA1_383380	join(<157086..157191,157255..157388,157469..157583,157708..157953,158029..158112,158201..158416,158508..158649,158723..158777,158839..158948,159032..159102,159170..159237,159299..>159421)	Acanthamoeba castellanii str. Neff	14917526
ACA1_383390	mRNA	ACA1_383390	NW_004457434.1	159658	160001	D	ACA1_383390	join(<159658..159683,159707..>160001)	Acanthamoeba castellanii str. Neff	14917527
ACA1_383400	mRNA	ACA1_383400	NW_004457434.1	160484	161338	R	ACA1_383400	complement(join(<160484..161049,161134..>161338))	Acanthamoeba castellanii str. Neff	14917528
ACA1_383410	mRNA	ACA1_383410	NW_004457434.1	161857	163016	D	ACA1_383410	join(<161857..162120,162219..162290,162347..162666,162812..162896,162981..>163016)	Acanthamoeba castellanii str. Neff	14917529
ACA1_383420	mRNA	ACA1_383420	NW_004457434.1	163670	164171	R	ACA1_383420	complement(join(<163670..163981,164082..>164171))	Acanthamoeba castellanii str. Neff	14917530
ACA1_383430	mRNA	ACA1_383430	NW_004457434.1	164503	167151	D	ACA1_383430	join(<164503..164542,164652..164821,164920..165053,165196..166334,166434..166591,166696..166880,166962..>167151)	Acanthamoeba castellanii str. Neff	14917531
ACA1_383440	mRNA	ACA1_383440	NW_004457434.1	167413	167733	D	ACA1_383440	join(<167413..167438,167493..>167733)	Acanthamoeba castellanii str. Neff	14917532
ACA1_383450	mRNA	ACA1_383450	NW_004457434.1	168483	170623	R	ACA1_383450	complement(join(<168483..168645,168723..168900,168994..169095,169201..169364,169445..169515,169613..169688,169788..169927,170008..170122,170195..170364,170432..>170623))	Acanthamoeba castellanii str. Neff	14917533
ACA1_383460	mRNA	ACA1_383460	NW_004457434.1	170770	171364	R	ACA1_383460	complement(join(<170770..170948,171020..171110,171200..>171364))	Acanthamoeba castellanii str. Neff	14917534
ACA1_383470	mRNA	ACA1_383470	NW_004457434.1	171976	178664	D	ACA1_383470	join(<171976..172302,172387..172713,172734..172756,172850..172976,173082..173230,173308..173368,173444..173527,173607..173784,173894..174226,174424..174567,174645..175421,175495..175613,175722..175886,175957..176203,176275..176402,176508..177108,177207..177334,177429..177553,177626..177723,177829..178223,178266..>178664)	Acanthamoeba castellanii str. Neff	14917535
ACA1_383480	mRNA	ACA1_383480	NW_004457434.1	179042	179432	D	ACA1_383480	join(<179042..179054,179152..>179432)	Acanthamoeba castellanii str. Neff	14917536
ACA1_383490	mRNA	ACA1_383490	NW_004457434.1	179566	184867	R	ACA1_383490	complement(join(<179566..179669,179784..179996,180143..180634,180725..181082,181192..181320,181405..181500,181611..181738,181818..181919,182043..182195,182322..182414,182496..182622,182702..182811,182881..182938,183050..183154,183234..183383,183473..183556,183658..183857,183947..184075,184176..184247,184364..184666,184840..>184867))	Acanthamoeba castellanii str. Neff	14917537
ACA1_383500	mRNA	ACA1_383500	NW_004457434.1	185138	186497	D	ACA1_383500	join(<185138..185765,185855..186070,186131..186259,186328..>186497)	Acanthamoeba castellanii str. Neff	14917538
ACA1_383510	mRNA	ACA1_383510	NW_004457434.1	186536	187304	R	ACA1_383510	complement(join(<186536..186659,186723..186875,186968..187026,187116..>187304))	Acanthamoeba castellanii str. Neff	14917539
ACA1_383520	mRNA	ACA1_383520	NW_004457434.1	187563	188063	R	ACA1_383520	complement(join(<187563..187943,188001..>188063))	Acanthamoeba castellanii str. Neff	14917540
ACA1_383540	mRNA	ACA1_383540	NW_004457434.1	205419	206341	R	ACA1_383540	complement(join(<205419..205564,205630..205687,205749..205823,205892..>206341))	Acanthamoeba castellanii str. Neff	14917542
ACA1_383560	mRNA	ACA1_383560	NW_004457434.1	207744	212462	R	ACA1_383560	complement(join(<207744..207991,208013..208200,208272..208395,208462..209301,209503..209730,209810..209951,210050..210250,210321..210392,210481..210580,210671..210795,210876..210981,211062..211194,211271..211354,211422..211551,211638..>212462))	Acanthamoeba castellanii str. Neff	14917544
ACA1_383570	mRNA	ACA1_383570	NW_004457434.1	212595	212918	D	ACA1_383570	<212595..>212918	Acanthamoeba castellanii str. Neff	14917545
ACA1_383580	mRNA	ACA1_383580	NW_004457434.1	213106	215535	R	ACA1_383580	complement(join(<213106..213801,213838..213941,214121..214315,214517..214687,214751..214879,214965..215085,215169..215244,215318..>215535))	Acanthamoeba castellanii str. Neff	14917546
ACA1_383590	mRNA	ACA1_383590	NW_004457434.1	216408	221066	R	ACA1_383590	complement(join(<216408..217080,217156..217288,217372..217623,217932..218007,218089..218190,218259..218490,218596..219075,219112..219235,219332..219409,219495..219708,219796..219887,219958..220025,220126..220230,220312..220424,220515..>221066))	Acanthamoeba castellanii str. Neff	14917547
ACA1_383600	mRNA	ACA1_383600	NW_004457434.1	222805	225345	R	ACA1_383600	complement(join(<222805..223030,223103..223128,223146..223182,223276..223370,223758..223901,223977..224186,224281..224385,224461..224601,224771..224914,225002..225085,225154..>225345))	Acanthamoeba castellanii str. Neff	14917548
ACA1_383610	mRNA	ACA1_383610	NW_004457434.1	225791	228486	D	ACA1_383610	join(<225791..225841,225930..225990,226088..226164,226242..226374,226466..226599,226736..226862,226942..227004,227077..227140,227211..227394,227453..227560,227646..227745,227828..227910,227980..228093,228168..228305,228409..>228486)	Acanthamoeba castellanii str. Neff	14917549
ACA1_383620	mRNA	ACA1_383620	NW_004457434.1	228756	233391	D	ACA1_383620	join(<228756..228813,228920..229014,229112..229201,229281..229337,229427..229501,229560..229621,229718..229789,229857..229921,230001..230133,230207..230291,230374..230445,230518..230655,230730..230788,230855..230955,231034..231149,231364..231433,231515..231585,231662..231757,232162..232245,232314..232398,232490..232578,232654..232719,232810..232918,233018..233064,233170..>233391)	Acanthamoeba castellanii str. Neff	14917453
ACA1_383630	mRNA	ACA1_383630	NW_004457434.1	233644	235422	D	ACA1_383630	join(<233644..233752,233852..234073,234173..234405,234485..234733,234852..235001,235150..235263,235342..>235422)	Acanthamoeba castellanii str. Neff	14917454
ACA1_383640	mRNA	ACA1_383640	NW_004457434.1	235638	238770	R	ACA1_383640	complement(join(<235638..235723,235801..236014,236122..236292,236396..236586,236674..237002,237077..237352,237449..237549,237651..237726,237808..238005,238181..238282,238381..238464,238547..>238770))	Acanthamoeba castellanii str. Neff	14917455
ACA1_383650	mRNA	ACA1_383650	NW_004457434.1	238810	239229	D	ACA1_383650	<238810..>239229	Acanthamoeba castellanii str. Neff	14917456
ACA1_383660	mRNA	ACA1_383660	NW_004457434.1	239373	241286	D	ACA1_383660	join(<239373..239409,239653..239758,239836..239911,240003..240089,240201..240313,240398..240604,240677..240864,240940..>241286)	Acanthamoeba castellanii str. Neff	14917457
ACA1_383670	mRNA	ACA1_383670	NW_004457434.1	241354	242703	R	ACA1_383670	complement(join(<241354..241434,241536..241720,241837..241947,242121..242206,242421..242480,242657..>242703))	Acanthamoeba castellanii str. Neff	14917458
ACA1_383680	mRNA	ACA1_383680	NW_004457434.1	243243	244290	R	ACA1_383680	complement(join(<243243..244198,244248..>244290))	Acanthamoeba castellanii str. Neff	14917459
ACA1_383690	mRNA	ACA1_383690	NW_004457434.1	245487	246457	R	ACA1_383690	complement(join(<245487..245687,245804..245905,245971..246125,246195..246314,246391..>246457))	Acanthamoeba castellanii str. Neff	14917460
ACA1_383700	mRNA	ACA1_383700	NW_004457434.1	246710	249513	D	ACA1_383700	join(<246710..246889,246977..247054,247128..247382,247484..247540,247653..247820,247889..247951,248072..248173,248274..248498,248515..248587,248655..248783,248875..248954,249055..249139,249218..249344,249417..>249513)	Acanthamoeba castellanii str. Neff	14917461
ACA1_383710	mRNA	ACA1_383710	NW_004457434.1	249834	252460	D	ACA1_383710	join(<249834..249911,249984..250062,250150..250297,250362..250506,250594..250680,250762..250884,250966..251073,251156..251305,251370..251465,251535..251646,251740..251804,251886..252045,252132..252253,252335..>252460)	Acanthamoeba castellanii str. Neff	14917462
ACA1_383720	mRNA	ACA1_383720	NW_004457434.1	253029	254738	D	ACA1_383720	join(<253029..253179,253256..253356,253467..253727,253839..254001,254090..254123,254206..254320,254407..254486,254567..254682,254728..>254738)	Acanthamoeba castellanii str. Neff	14917463
ACA1_383730	mRNA	ACA1_383730	NW_004457434.1	255360	256504	R	ACA1_383730	complement(join(<255360..255577,255677..255741,255811..255994,256090..256228,256403..>256504))	Acanthamoeba castellanii str. Neff	14917464
ACA1_383740	mRNA	ACA1_383740	NW_004457434.1	256721	257782	D	ACA1_383740	join(<256721..256785,256862..256932,257071..257139,257224..257403,257491..257583,257667..>257782)	Acanthamoeba castellanii str. Neff	14917465
ACA1_383750	mRNA	ACA1_383750	NW_004457434.1	258265	262173	D	ACA1_383750	join(<258265..258381,258436..258612,258683..258793,258885..258969,259045..259100,259179..260300,260451..260502,260543..260878,260966..261119,261196..261349,261408..261546,261636..261875,261959..>262173)	Acanthamoeba castellanii str. Neff	14917466
ACA1_383770	mRNA	ACA1_383770	NW_004457434.1	274235	277023	D	ACA1_383770	join(<274235..275638,275749..276231,276246..276664,276705..276885,276925..>277023)	Acanthamoeba castellanii str. Neff	14917468
ACA1_383780	mRNA	ACA1_383780	NW_004457434.1	277117	279266	D	ACA1_383780	join(<277117..277209,277278..277428,277509..277606,277686..277749,277836..277942,278038..278172,278270..278403,278445..278571,278701..278818,278889..279026,279112..>279266)	Acanthamoeba castellanii str. Neff	14917469
ACA1_383790	mRNA	ACA1_383790	NW_004457434.1	279701	283135	D	ACA1_383790	join(<279701..280038,280068..280133,280370..280442,280478..280635,280739..280957,281168..281174,281273..281376,281452..281578,281673..281787,281863..282069,282191..282302,282387..282542,282634..>283135)	Acanthamoeba castellanii str. Neff	14917470
ACA1_383800	mRNA	ACA1_383800	NW_004457434.1	283209	285089	R	ACA1_383800	complement(join(<283209..283358,283661..283844,283918..284100,284245..284384,284478..284592,284656..>285089))	Acanthamoeba castellanii str. Neff	14917506
ACA1_120250	mRNA	ACA1_120250	NW_004457433.1	11959	12783	D	ACA1_120250	join(<11959..11997,12067..12161,12266..12287,12386..12446,12532..12624,12746..>12783)	Acanthamoeba castellanii str. Neff	14917451
ACA1_120360	mRNA	ACA1_120360	NW_004457433.1	13047	14101	R	ACA1_120360	complement(join(<13047..13200,13279..13330,13415..13519,13626..13682,13784..13919,14039..>14101))	Acanthamoeba castellanii str. Neff	14917452
ACA1_019960	mRNA	ACA1_019960	NW_004457432.1	150	3084	D	ACA1_019960	join(<150..219,299..384,460..617,698..815,921..1032,1100..1155,1242..1313,1387..1459,1556..1656,1774..1900,2008..2110,2214..2309,2399..2472,2633..2724,2810..2900,3002..>3084)	Acanthamoeba castellanii str. Neff	14917447
ACA1_019980	mRNA	ACA1_019980	NW_004457432.1	5468	6135	R	ACA1_019980	complement(join(<5468..5953,6037..>6135))	Acanthamoeba castellanii str. Neff	14917449
ACA1_019990	mRNA	ACA1_019990	NW_004457432.1	7835	10797	D	ACA1_019990	join(<7835..8013,8184..8229,8284..8398,8476..8555,8618..8717,8788..8993,9061..9123,9202..9285,9372..9447,9514..9584,9655..9765,9834..9915,9983..10044,10106..10150,10222..10309,10410..10441,10553..10606,10681..>10797)	Acanthamoeba castellanii str. Neff	14917450
ACA1_087290	mRNA	ACA1_087290	NW_004457431.1	808	1047	R	ACA1_087290	complement(<808..>1047)	Acanthamoeba castellanii str. Neff	14917313
ACA1_087300	mRNA	ACA1_087300	NW_004457431.1	2052	5076	D	ACA1_087300	join(<2052..2091,2186..2406,2515..2784,2866..2972,3040..3156,3187..3307,3377..3970,4091..4360,4425..4534,4601..4714,4780..4861,4939..>5076)	Acanthamoeba castellanii str. Neff	14917408
ACA1_087310	mRNA	ACA1_087310	NW_004457431.1	5828	6429	R	ACA1_087310	complement(join(<5828..6071,6180..6269,6332..>6429))	Acanthamoeba castellanii str. Neff	14917409
ACA1_087320	mRNA	ACA1_087320	NW_004457431.1	7775	9405	R	ACA1_087320	complement(join(<7775..8554,8633..8893,8974..>9405))	Acanthamoeba castellanii str. Neff	14917402
ACA1_087330	mRNA	ACA1_087330	NW_004457431.1	9921	10160	D	ACA1_087330	<9921..>10160	Acanthamoeba castellanii str. Neff	14917403
ACA1_087340	mRNA	ACA1_087340	NW_004457431.1	10724	11350	D	ACA1_087340	<10724..>11350	Acanthamoeba castellanii str. Neff	14917404
ACA1_087350	mRNA	ACA1_087350	NW_004457431.1	11513	13560	D	ACA1_087350	join(<11513..11655,11771..11987,12084..12211,12293..12401,12532..12629,12708..12801,12895..13007,13092..>13560)	Acanthamoeba castellanii str. Neff	14917405
ACA1_087360	mRNA	ACA1_087360	NW_004457431.1	14439	18226	D	ACA1_087360	join(<14439..14538,14697..14812,14902..15298,15413..15862,15980..16135,16214..16342,16416..16495,16572..16698,16773..17022,17123..17504,17610..17810,17924..>18226)	Acanthamoeba castellanii str. Neff	14917406
ACA1_087370	mRNA	ACA1_087370	NW_004457431.1	18418	19102	D	ACA1_087370	join(<18418..18503,18600..18738,18806..>19102)	Acanthamoeba castellanii str. Neff	14917407
ACA1_087380	mRNA	ACA1_087380	NW_004457431.1	19337	21598	D	ACA1_087380	join(<19337..19491,19569..19719,19770..19880,19950..20070,20114..20343,20456..20518,20617..20705,20763..20819,21057..21177,21297..21445,21505..>21598)	Acanthamoeba castellanii str. Neff	14917262
ACA1_087390	mRNA	ACA1_087390	NW_004457431.1	22065	23389	D	ACA1_087390	join(<22065..22234,22346..22496,22611..22700,22781..22901,22968..23164,23252..>23389)	Acanthamoeba castellanii str. Neff	14917263
ACA1_087400	mRNA	ACA1_087400	NW_004457431.1	23580	24736	D	ACA1_087400	join(<23580..23608,23694..23774,23903..24026,24115..24257,24322..24414,24481..>24736)	Acanthamoeba castellanii str. Neff	14917264
ACA1_087410	mRNA	ACA1_087410	NW_004457431.1	25149	25790	D	ACA1_087410	join(<25149..25232,25451..25576,25701..>25790)	Acanthamoeba castellanii str. Neff	14917265
ACA1_087420	mRNA	ACA1_087420	NW_004457431.1	25883	27897	D	ACA1_087420	join(<25883..25988,26059..26255,26365..26427,26499..26581,26737..26793,26862..26942,27026..27149,27239..27387,27463..27555,27645..>27897)	Acanthamoeba castellanii str. Neff	14917266
ACA1_087430	mRNA	ACA1_087430	NW_004457431.1	28071	28295	R	ACA1_087430	complement(join(<28071..28219,28232..>28295))	Acanthamoeba castellanii str. Neff	14917267
ACA1_087440	mRNA	ACA1_087440	NW_004457431.1	28975	30031	D	ACA1_087440	join(<28975..29386,29451..>30031)	Acanthamoeba castellanii str. Neff	14917268
ACA1_087450	mRNA	ACA1_087450	NW_004457431.1	31117	33601	R	ACA1_087450	complement(join(<31117..31372,31443..31535,31607..31755,31813..31936,32040..32138,32342..32430,32502..32564,32637..32854,32900..33020,33116..33157,33169..33364,33441..>33601))	Acanthamoeba castellanii str. Neff	14917269
ACA1_087460	mRNA	ACA1_087460	NW_004457431.1	33824	35195	R	ACA1_087460	complement(join(<33824..34805,34883..35048,35126..>35195))	Acanthamoeba castellanii str. Neff	14917270
ACA1_087470	mRNA	ACA1_087470	NW_004457431.1	35723	36921	R	ACA1_087470	complement(join(<35723..36073,36205..36293,36397..36482,36593..>36921))	Acanthamoeba castellanii str. Neff	14917271
ACA1_087480	mRNA	ACA1_087480	NW_004457431.1	37288	38574	R	ACA1_087480	complement(join(<37288..37395,37491..37595,37673..37849,37945..38208,38461..>38574))	Acanthamoeba castellanii str. Neff	14917352
ACA1_087490	mRNA	ACA1_087490	NW_004457431.1	39101	40183	D	ACA1_087490	<39101..>40183	Acanthamoeba castellanii str. Neff	14917353
ACA1_087500	mRNA	ACA1_087500	NW_004457431.1	40643	44659	D	ACA1_087500	join(<40643..40826,41073..41118,41181..41236,41305..41385,41470..41556,41653..41800,41880..41985,42114..42215,42338..42432,42568..42656,42733..42809,42891..42970,43062..43163,43290..43382,43466..43562,43692..43761,43864..43919,44028..44114,44264..44367,44479..>44659)	Acanthamoeba castellanii str. Neff	14917354
ACA1_087510	mRNA	ACA1_087510	NW_004457431.1	44728	48071	D	ACA1_087510	join(<44728..44909,45010..45200,45363..45640,45787..45957,46056..46230,46370..46478,46580..46786,46906..47010,47086..47221,47362..47498,47574..47826,47913..>48071)	Acanthamoeba castellanii str. Neff	14917355
ACA1_087520	mRNA	ACA1_087520	NW_004457431.1	48221	50797	R	ACA1_087520	complement(join(<48221..48306,48450..48714,48809..48953,49070..49173,49310..49414,49498..49682,49787..49875,49980..50073,50219..50294,50394..50469,50586..>50797))	Acanthamoeba castellanii str. Neff	14917356
ACA1_087530	mRNA	ACA1_087530	NW_004457431.1	51052	53029	D	ACA1_087530	join(<51052..51108,51208..51291,51403..51486,51610..51673,51769..51859,51951..52081,52165..52270,52355..52468,52570..52773,52852..>53029)	Acanthamoeba castellanii str. Neff	14917357
ACA1_087540	mRNA	ACA1_087540	NW_004457431.1	53469	54494	D	ACA1_087540	join(<53469..53828,53839..54252,54396..>54494)	Acanthamoeba castellanii str. Neff	14917358
ACA1_087550	mRNA	ACA1_087550	NW_004457431.1	54633	56710	D	ACA1_087550	join(<54633..54751,54852..54996,55094..55218,55298..55537,55708..55842,56017..56390,56475..>56710)	Acanthamoeba castellanii str. Neff	14917359
ACA1_087560	mRNA	ACA1_087560	NW_004457431.1	56977	57885	R	ACA1_087560	complement(join(<56977..57105,57208..57238,57322..57486,57554..57649,57731..>57885))	Acanthamoeba castellanii str. Neff	14917360
ACA1_087570	mRNA	ACA1_087570	NW_004457431.1	58132	63210	R	ACA1_087570	complement(join(<58132..61533,61620..61796,61870..61985,62105..62204,62348..62488,62560..62830,62903..>63210))	Acanthamoeba castellanii str. Neff	14917361
ACA1_087580	mRNA	ACA1_087580	NW_004457431.1	63473	63816	R	ACA1_087580	complement(join(<63473..63580,63685..>63816))	Acanthamoeba castellanii str. Neff	14917362
ACA1_087600	mRNA	ACA1_087600	NW_004457431.1	66599	68093	R	ACA1_087600	complement(join(<66599..66838,66925..67220,67299..67461,67561..67742,67841..>68093))	Acanthamoeba castellanii str. Neff	14917364
ACA1_087610	mRNA	ACA1_087610	NW_004457431.1	69222	78090	D	ACA1_087610	join(<69222..69378,69463..69574,69713..69974,70115..70650,70779..70965,71052..71144,71253..71391,71485..71563,71646..71778,71897..72061,72140..72298,72492..72600,72683..72763,72885..73063,73170..73211,73305..73418,73615..73807,73943..74040,74126..74221,74383..74517,74715..74964,75067..75975,76107..76192,76305..76406,76481..76551,76626..76687,76811..76917,77047..77219,77334..77511,77632..>78090)	Acanthamoeba castellanii str. Neff	14917365
ACA1_087620	mRNA	ACA1_087620	NW_004457431.1	78845	80647	R	ACA1_087620	complement(join(<78845..79053,79150..79372,79487..79771,79859..>80647))	Acanthamoeba castellanii str. Neff	14917366
ACA1_087630	mRNA	ACA1_087630	NW_004457431.1	81137	84007	R	ACA1_087630	complement(join(<81137..81567,81686..81821,81907..82066,82127..82256,82332..82431,82504..82651,82788..82916,83002..83081,83156..83257,83333..83512,83602..83740,83833..83977,84001..>84007))	Acanthamoeba castellanii str. Neff	14917368
ACA1_087640	mRNA	ACA1_087640	NW_004457431.1	84052	88537	R	ACA1_087640	complement(join(<84052..84215,84292..84497,84580..84674,84799..84982,85087..85208,85301..85454,85506..85609,85683..85794,85916..85997,86065..86121,86190..86253,86325..86467,86532..86622,86693..86918,86958..87101,87185..87351,87413..87566,87637..87696,87767..87836,87904..88254,88363..>88537))	Acanthamoeba castellanii str. Neff	14917369
ACA1_087650	mRNA	ACA1_087650	NW_004457431.1	89196	92927	R	ACA1_087650	complement(join(<89196..89327,89420..89689,89764..90092,90219..90336,90483..90740,90832..90910,90998..91158,91201..91370,91480..91639,91768..91907,92014..92155,92262..92321,92401..92505,92581..92683,92869..>92927))	Acanthamoeba castellanii str. Neff	14917370
ACA1_087660	mRNA	ACA1_087660	NW_004457431.1	93352	93843	D	ACA1_087660	join(<93352..93476,93543..93661,93731..>93843)	Acanthamoeba castellanii str. Neff	14917371
ACA1_087670	mRNA	ACA1_087670	NW_004457431.1	94037	95834	R	ACA1_087670	complement(join(<94037..95209,95306..95554,95748..>95834))	Acanthamoeba castellanii str. Neff	14917372
ACA1_087680	mRNA	ACA1_087680	NW_004457431.1	96149	98509	R	ACA1_087680	complement(join(<96149..96882,96969..97387,97463..97515,97592..97674,97780..98027,98109..>98509))	Acanthamoeba castellanii str. Neff	14917373
ACA1_087700	mRNA	ACA1_087700	NW_004457431.1	101377	101790	D	ACA1_087700	<101377..>101790	Acanthamoeba castellanii str. Neff	14917375
ACA1_087710	mRNA	ACA1_087710	NW_004457431.1	102650	104829	D	ACA1_087710	join(<102650..102786,102872..103242,103304..103380,103469..103622,103705..103818,103891..103978,104008..104246,104320..104447,104517..104645,104707..>104829)	Acanthamoeba castellanii str. Neff	14917376
ACA1_087720	mRNA	ACA1_087720	NW_004457431.1	104975	106510	D	ACA1_087720	join(<104975..105062,105148..105307,105396..105480,105585..105672,105744..105815,105882..105938,106021..106262,106376..>106510)	Acanthamoeba castellanii str. Neff	14917377
ACA1_087730	mRNA	ACA1_087730	NW_004457431.1	107137	110882	D	ACA1_087730	join(<107137..107290,107377..107441,107520..107725,107829..107941,108033..108169,108237..108345,108478..108624,108706..108846,108938..109069,109190..109257,109331..109385,109479..109604,109703..109825,109927..110049,110147..110278,110350..110415,110500..110640,110724..110748,110837..>110882)	Acanthamoeba castellanii str. Neff	14917378
ACA1_087850	mRNA	ACA1_087850	NW_004457431.1	114238	114463	R	ACA1_087850	complement(<114238..>114463)	Acanthamoeba castellanii str. Neff	14917380
ACA1_087860	mRNA	ACA1_087860	NW_004457431.1	114692	118413	D	ACA1_087860	join(<114692..114789,114928..115059,115251..115410,115510..115888,115982..116059,116141..116289,116371..116585,116695..117150,117273..117385,117461..117627,117730..117971,118057..118205,118292..>118413)	Acanthamoeba castellanii str. Neff	14917381
ACA1_087870	mRNA	ACA1_087870	NW_004457431.1	118473	121216	R	ACA1_087870	complement(join(<118473..118679,118746..118892,119014..119165,119312..119419,119547..119651,119749..120013,120115..120236,120339..120415,120543..120678,120759..120886,121071..>121216))	Acanthamoeba castellanii str. Neff	14917382
ACA1_087880	mRNA	ACA1_087880	NW_004457431.1	121681	124278	R	ACA1_087880	complement(join(<121681..121759,121856..121973,122061..122199,122298..122491,122601..122690,122773..122870,122958..123015,123098..123295,123382..123459,123549..123679,123813..123912,124185..>124278))	Acanthamoeba castellanii str. Neff	14917383
ACA1_087890	mRNA	ACA1_087890	NW_004457431.1	124508	125437	R	ACA1_087890	complement(join(<124508..124742,124857..>125437))	Acanthamoeba castellanii str. Neff	14917314
ACA1_087900	mRNA	ACA1_087900	NW_004457431.1	125437	128338	R	ACA1_087900	complement(join(<125437..125779,126006..126080,126177..126250,126338..126952,127039..127188,127307..127387,127465..127577,127669..127747,127856..>128338))	Acanthamoeba castellanii str. Neff	14917315
ACA1_087910	mRNA	ACA1_087910	NW_004457431.1	128465	129656	D	ACA1_087910	join(<128465..128486,128696..128810,128957..129099,129205..>129656)	Acanthamoeba castellanii str. Neff	14917316
ACA1_087920	mRNA	ACA1_087920	NW_004457431.1	129818	130968	D	ACA1_087920	join(<129818..130233,130307..130416,130505..>130968)	Acanthamoeba castellanii str. Neff	14917317
ACA1_087930	mRNA	ACA1_087930	NW_004457431.1	131035	136124	R	ACA1_087930	complement(join(<131035..131109,131179..131250,131322..132598,132691..132907,132977..133147,133222..133317,133383..133490,133554..133733,133797..133927,134030..134205,134277..134532,134598..134945,135017..135198,135276..135424,135506..135612,135680..>136124))	Acanthamoeba castellanii str. Neff	14917318
ACA1_087940	mRNA	ACA1_087940	NW_004457431.1	136704	138608	D	ACA1_087940	join(<136704..136805,136873..137047,137108..137195,137260..137363,137432..137571,137629..137803,137870..138068,138168..138283,138343..138453,138517..>138608)	Acanthamoeba castellanii str. Neff	14917319
ACA1_087950	mRNA	ACA1_087950	NW_004457431.1	138882	140307	D	ACA1_087950	join(<138882..138939,139047..139112,139191..139384,139474..139566,139651..139728,139842..140095,140175..>140307)	Acanthamoeba castellanii str. Neff	14917320
ACA1_087960	mRNA	ACA1_087960	NW_004457431.1	140754	144527	D	ACA1_087960	join(<140754..140822,140972..141044,141205..141335,141456..141527,141597..141725,141816..142115,142341..142494,142551..142648,142722..142833,142902..143041,143121..143249,143330..143483,143983..144351,144442..>144527)	Acanthamoeba castellanii str. Neff	14917321
ACA1_087970	mRNA	ACA1_087970	NW_004457431.1	144931	151885	D	ACA1_087970	join(<144931..145044,145120..145290,145369..145539,145617..145729,145854..145967,145995..146093,146176..146281,146365..146487,146571..146642,146711..146845,146924..147179,147259..147390,147464..147564,147769..148104,148180..148333,148432..148550,148646..148808,148896..148948,148973..149241,149330..149415,149481..149767,149859..150061,150154..150324,150435..150683,150770..150914,150988..151367,151506..151728,151802..>151885)	Acanthamoeba castellanii str. Neff	14917322
ACA1_088080	mRNA	ACA1_088080	NW_004457431.1	152043	152786	D	ACA1_088080	join(<152043..152101,152177..>152786)	Acanthamoeba castellanii str. Neff	14917323
ACA1_088090	mRNA	ACA1_088090	NW_004457431.1	156540	157317	R	ACA1_088090	complement(join(<156540..156656,156715..156806,156867..157001,157126..157242,157314..>157317))	Acanthamoeba castellanii str. Neff	14917324
ACA1_088200	mRNA	ACA1_088200	NW_004457431.1	157765	158247	D	ACA1_088200	join(<157765..157953,157990..>158247)	Acanthamoeba castellanii str. Neff	14917325
ACA1_088210	mRNA	ACA1_088210	NW_004457431.1	159125	160728	R	ACA1_088210	complement(join(<159125..159241,159314..159405,159466..159600,159708..159824,159897..159972,160047..160226,160325..160443,160533..160601,160656..>160728))	Acanthamoeba castellanii str. Neff	14917326
ACA1_088220	mRNA	ACA1_088220	NW_004457431.1	161128	162795	R	ACA1_088220	complement(<161128..>162795)	Acanthamoeba castellanii str. Neff	14917327
ACA1_088330	mRNA	ACA1_088330	NW_004457431.1	163194	163878	D	ACA1_088330	join(<163194..163485,163592..>163878)	Acanthamoeba castellanii str. Neff	14917328
ACA1_088340	mRNA	ACA1_088340	NW_004457431.1	163962	164874	R	ACA1_088340	complement(join(<163962..163988,164185..164364,164461..164579,164679..164747,164802..>164874))	Acanthamoeba castellanii str. Neff	14917329
ACA1_088450	mRNA	ACA1_088450	NW_004457431.1	165832	166677	R	ACA1_088450	complement(join(<165832..166137,166408..>166677))	Acanthamoeba castellanii str. Neff	14917330
ACA1_088560	mRNA	ACA1_088560	NW_004457431.1	166897	167284	R	ACA1_088560	complement(join(<166897..166902,166976..>167284))	Acanthamoeba castellanii str. Neff	14917331
ACA1_088570	mRNA	ACA1_088570	NW_004457431.1	167670	168335	R	ACA1_088570	complement(join(<167670..167811,167972..168110,168293..>168335))	Acanthamoeba castellanii str. Neff	14917332
ACA1_088580	mRNA	ACA1_088580	NW_004457431.1	168980	171690	D	ACA1_088580	join(<168980..169109,169222..169256,169362..169533,169607..169708,169793..169966,170041..170131,170209..170286,170372..170522,170678..170758,170889..171278,171372..171482,171559..>171690)	Acanthamoeba castellanii str. Neff	14917296
ACA1_088590	mRNA	ACA1_088590	NW_004457431.1	171947	175241	D	ACA1_088590	join(<171947..172085,172350..172450,172622..172746,172853..172965,173196..173341,173513..173749,174032..174107,174204..174338,174442..174562,174623..174826,175016..>175241)	Acanthamoeba castellanii str. Neff	14917297
ACA1_088600	mRNA	ACA1_088600	NW_004457431.1	175363	176850	R	ACA1_088600	complement(join(<175363..175536,175625..175764,175861..176413,176602..>176850))	Acanthamoeba castellanii str. Neff	14917298
ACA1_088610	mRNA	ACA1_088610	NW_004457431.1	177929	182619	D	ACA1_088610	join(<177929..178083,178153..178246,178291..178546,178665..178808,178933..179039,179113..179241,179361..179478,179584..179678,179768..179921,180026..180232,180312..180418,180534..180842,180969..181061,181173..181703,181794..182020,182141..182397,182489..>182619)	Acanthamoeba castellanii str. Neff	14917299
ACA1_088620	mRNA	ACA1_088620	NW_004457431.1	182770	183831	R	ACA1_088620	complement(join(<182770..182938,183015..183184,183283..>183831))	Acanthamoeba castellanii str. Neff	14917300
ACA1_088630	mRNA	ACA1_088630	NW_004457431.1	183993	186120	R	ACA1_088630	complement(join(<183993..184167,184259..184446,184542..185567,185754..185831,185920..185987,186087..>186120))	Acanthamoeba castellanii str. Neff	14917301
ACA1_088640	mRNA	ACA1_088640	NW_004457431.1	186248	188338	D	ACA1_088640	join(<186248..186339,186427..186471,186554..186633,186727..186798,186948..187048,187490..187646,187752..187912,188006..>188338)	Acanthamoeba castellanii str. Neff	14917302
ACA1_088650	mRNA	ACA1_088650	NW_004457431.1	188417	193398	R	ACA1_088650	complement(join(<188417..188520,188618..188692,188769..188873,188942..189131,189319..189445,189512..189629,189728..189820,189963..190086,190176..190254,190317..190842,190943..191021,191162..191266,191343..191481,191620..191798,191911..191995,192088..192191,192324..192392,192480..192603,192702..192814,192898..>193398))	Acanthamoeba castellanii str. Neff	14917303
ACA1_088660	mRNA	ACA1_088660	NW_004457431.1	193584	199162	R	ACA1_088660	complement(join(<193584..195549,195645..197418,197508..197664,197742..197804,197901..197999,198238..198345,198456..198534,198659..198771,198882..198970,199045..>199162))	Acanthamoeba castellanii str. Neff	14917304
ACA1_088670	mRNA	ACA1_088670	NW_004457431.1	199656	200381	R	ACA1_088670	complement(join(<199656..199766,199868..200002,200166..>200381))	Acanthamoeba castellanii str. Neff	14917305
ACA1_088680	mRNA	ACA1_088680	NW_004457431.1	200682	202042	D	ACA1_088680	join(<200682..200718,200800..201123,201192..201264,201347..201466,201529..201626,201704..201875,201961..>202042)	Acanthamoeba castellanii str. Neff	14917306
ACA1_088690	mRNA	ACA1_088690	NW_004457431.1	202124	206758	R	ACA1_088690	complement(join(<202124..202593,202806..203078,203182..203384,203513..203643,203722..204018,204105..204219,204356..204393,204511..204767,204835..204957,205060..205206,205288..205413,205492..205617,205691..205825,205930..206174,206428..206530,206662..>206758))	Acanthamoeba castellanii str. Neff	14917307
ACA1_088700	mRNA	ACA1_088700	NW_004457431.1	207215	209030	R	ACA1_088700	complement(join(<207215..207262,207355..207440,207493..207624,207716..207860,207961..208201,208278..208364,208434..208480,208545..208628,208699..208732,208796..208906,208981..>209030))	Acanthamoeba castellanii str. Neff	14917308
ACA1_088710	mRNA	ACA1_088710	NW_004457431.1	209119	210720	D	ACA1_088710	join(<209119..209359,209426..209565,209632..209740,209884..209942,210005..210149,210226..210374,210484..>210720)	Acanthamoeba castellanii str. Neff	14917309
ACA1_088720	mRNA	ACA1_088720	NW_004457431.1	211119	213668	D	ACA1_088720	join(<211119..211188,211326..211462,211672..211813,211910..211965,212061..212897,212997..213155,213232..213382,213457..>213668)	Acanthamoeba castellanii str. Neff	14917310
ACA1_088730	mRNA	ACA1_088730	NW_004457431.1	213767	215129	R	ACA1_088730	complement(join(<213767..214033,214121..214211,214322..214444,214533..214598,214688..214833,214950..>215129))	Acanthamoeba castellanii str. Neff	14917311
ACA1_088740	mRNA	ACA1_088740	NW_004457431.1	215325	217073	D	ACA1_088740	join(<215325..215378,215483..215640,215739..215791,215908..216023,216153..216267,216351..216425,216506..216649,216736..216817,216914..>217073)	Acanthamoeba castellanii str. Neff	14917312
ACA1_088750	mRNA	ACA1_088750	NW_004457431.1	217254	219237	R	ACA1_088750	complement(join(<217254..217422,217549..217630,217724..217876,217951..218061,218109..218235,218330..218445,218557..218612,218712..218869,219184..>219237))	Acanthamoeba castellanii str. Neff	14917333
ACA1_088770	mRNA	ACA1_088770	NW_004457431.1	224627	225313	R	ACA1_088770	complement(join(<224627..224812,224969..>225313))	Acanthamoeba castellanii str. Neff	14917334
ACA1_088780	mRNA	ACA1_088780	NW_004457431.1	225983	226605	R	ACA1_088780	complement(join(<225983..226167,226281..>226605))	Acanthamoeba castellanii str. Neff	14917336
ACA1_088790	mRNA	ACA1_088790	NW_004457431.1	226964	229396	R	ACA1_088790	complement(join(<226964..227035,227124..227283,227314..228773,228845..228964,229053..229172,229241..>229396))	Acanthamoeba castellanii str. Neff	14917337
ACA1_088800	mRNA	ACA1_088800	NW_004457431.1	229481	231239	R	ACA1_088800	complement(join(<229481..229525,229546..229956,230065..230265,230336..230386,230451..230582,230656..230831,230951..>231239))	Acanthamoeba castellanii str. Neff	14917338
ACA1_088810	mRNA	ACA1_088810	NW_004457431.1	231756	234844	D	ACA1_088810	join(<231756..231789,231885..232142,232234..232364,232457..232579,232670..232802,232894..233064,233152..233570,233672..233792,233949..234144,234223..234386,234488..234601,234711..>234844)	Acanthamoeba castellanii str. Neff	14917339
ACA1_088820	mRNA	ACA1_088820	NW_004457431.1	234967	239794	R	ACA1_088820	complement(join(<234967..235108,235181..235302,235365..235459,235533..235643,235711..235791,235862..236023,236096..236233,236305..236422,236494..236662,236727..236808,236886..237019,237086..237270,237336..237521,237596..237672,237737..237896,238085..238396,238469..238540,238607..238738,238805..238927,239014..239072,239176..>239794))	Acanthamoeba castellanii str. Neff	14917340
ACA1_088830	mRNA	ACA1_088830	NW_004457431.1	240209	241476	R	ACA1_088830	complement(join(<240209..240766,240854..241021,241140..241298,241363..>241476))	Acanthamoeba castellanii str. Neff	14917341
ACA1_088840	mRNA	ACA1_088840	NW_004457431.1	242012	246362	R	ACA1_088840	complement(join(<242012..242102,242183..242295,242388..242576,242644..242815,242890..242972,243040..243157,243233..243324,243512..243671,243736..243803,243875..244015,244115..244252,244335..244508,244576..244713,244792..244914,244997..245094,245179..245310,245405..245728,245792..245861,245946..246107,246204..>246362))	Acanthamoeba castellanii str. Neff	14917342
ACA1_088850	mRNA	ACA1_088850	NW_004457431.1	247117	248473	R	ACA1_088850	complement(join(<247117..247570,247653..247813,247882..248028,248111..>248473))	Acanthamoeba castellanii str. Neff	14917343
ACA1_088860	mRNA	ACA1_088860	NW_004457431.1	248733	251212	D	ACA1_088860	join(<248733..249011,249131..249275,249388..249535,249616..249725,249830..249911,249987..250079,250162..>251212)	Acanthamoeba castellanii str. Neff	14917344
ACA1_088870	mRNA	ACA1_088870	NW_004457431.1	251318	252640	R	ACA1_088870	complement(join(<251318..251359,251447..251607,251678..251852,251929..252027,252109..252191,252263..252359,252416..252540,252598..>252640))	Acanthamoeba castellanii str. Neff	14917345
ACA1_088880	mRNA	ACA1_088880	NW_004457431.1	252780	254373	R	ACA1_088880	complement(join(<252780..253003,253073..253226,253308..253390,253455..253579,253654..253715,253772..253841,253919..253988,254052..254162,254352..>254373))	Acanthamoeba castellanii str. Neff	14917346
ACA1_088890	mRNA	ACA1_088890	NW_004457431.1	254958	255746	D	ACA1_088890	join(<254958..255249,255313..>255746)	Acanthamoeba castellanii str. Neff	14917347
ACA1_088900	mRNA	ACA1_088900	NW_004457431.1	256319	258274	R	ACA1_088900	complement(join(<256319..256430,256549..256612,256687..256770,256857..256988,257079..257191,257270..257408,257489..257613,257690..257804,257956..>258274))	Acanthamoeba castellanii str. Neff	14917348
ACA1_088920	mRNA	ACA1_088920	NW_004457431.1	260428	266217	D	ACA1_088920	join(<260428..260809,260877..261076,261147..261281,261360..261442,261512..261586,261660..261754,261813..261909,261981..262095,262180..262390,262476..262592,262707..263664,263755..263876,263988..264239,264336..264454,264543..264622,264701..264797,264889..265080,265188..265250,265329..265412,265504..265650,265743..265843,265914..266073,266143..>266217)	Acanthamoeba castellanii str. Neff	14917350
ACA1_088930	mRNA	ACA1_088930	NW_004457431.1	267250	267802	R	ACA1_088930	complement(join(<267250..267296,267407..267617,267707..>267802))	Acanthamoeba castellanii str. Neff	14917351
ACA1_088940	mRNA	ACA1_088940	NW_004457431.1	268971	271198	D	ACA1_088940	join(<268971..269066,269152..269216,269380..269599,269663..269749,269845..269927,270022..270110,270187..270296,270394..270416,270507..270724,270820..270857,270944..271002,271075..>271198)	Acanthamoeba castellanii str. Neff	14917430
ACA1_088950	mRNA	ACA1_088950	NW_004457431.1	271470	273163	D	ACA1_088950	join(<271470..271591,271670..271756,271844..271907,271973..272035,272112..272217,272240..272348,272442..272616,272698..272878,272946..>273163)	Acanthamoeba castellanii str. Neff	14917431
ACA1_088960	mRNA	ACA1_088960	NW_004457431.1	273273	275909	R	ACA1_088960	complement(join(<273273..273514,273593..273666,273748..273907,273986..274127,274212..274349,274432..274501,274516..274567,274635..274764,274837..274948,275009..275091,275162..275276,275369..275526,275679..>275909))	Acanthamoeba castellanii str. Neff	14917432
ACA1_088970	mRNA	ACA1_088970	NW_004457431.1	276253	277067	R	ACA1_088970	complement(join(<276253..276326,276411..276767,276863..>277067))	Acanthamoeba castellanii str. Neff	14917433
ACA1_088980	mRNA	ACA1_088980	NW_004457431.1	277319	278917	D	ACA1_088980	join(<277319..277506,277566..277625,277698..277848,277942..278072,278168..278726,278843..>278917)	Acanthamoeba castellanii str. Neff	14917434
ACA1_088990	mRNA	ACA1_088990	NW_004457431.1	279613	285480	D	ACA1_088990	join(<279613..279791,279927..280675,280780..281061,281135..281247,281316..281387,281461..281622,281698..281971,282061..282208,282287..282495,282587..282782,282853..283081,283153..>285480)	Acanthamoeba castellanii str. Neff	14917435
ACA1_089000	mRNA	ACA1_089000	NW_004457431.1	286373	292698	D	ACA1_089000	join(<286373..286448,286841..287119,287195..287428,287480..287610,287700..287795,287903..287980,288056..288142,288235..288455,288553..288630,288700..288926,289007..289164,289252..289456,289532..289690,289791..289931,290002..290159,290239..290317,290403..290476,290573..290758,290842..291097,291195..291324,291400..291475,291552..291645,291715..291853,291922..292074,292207..292225,292357..292442,292518..>292698)	Acanthamoeba castellanii str. Neff	14917436
ACA1_089010	mRNA	ACA1_089010	NW_004457431.1	293511	299335	D	ACA1_089010	join(<293511..293644,293875..295066,295157..295228,295375..295536,295617..296041,296117..296524,296644..296872,296957..297545,297618..297739,297848..>299335)	Acanthamoeba castellanii str. Neff	14917437
ACA1_089020	mRNA	ACA1_089020	NW_004457431.1	299427	299969	D	ACA1_089020	join(<299427..299456,299496..>299969)	Acanthamoeba castellanii str. Neff	14917438
ACA1_089030	mRNA	ACA1_089030	NW_004457431.1	300291	302823	R	ACA1_089030	complement(join(<300291..300395,300485..300809,300983..301115,301214..301383,301494..301633,301754..301828,301922..302041,302380..302445,302494..302637,302683..>302823))	Acanthamoeba castellanii str. Neff	14917439
ACA1_089040	mRNA	ACA1_089040	NW_004457431.1	303462	305194	D	ACA1_089040	join(<303462..303469,303496..303604,303629..303691,303762..303893,303966..304092,304197..304449,304526..304638,304732..304817,304891..304968,305069..>305194)	Acanthamoeba castellanii str. Neff	14917440
ACA1_089050	mRNA	ACA1_089050	NW_004457431.1	305497	311859	D	ACA1_089050	join(<305497..305678,305825..306647,306752..307007,307118..307230,307454..307615,307736..308016,308114..308245,308350..308558,308653..308867,308957..309160,309251..309585,309670..309752,309830..310006,310103..>311859)	Acanthamoeba castellanii str. Neff	14917441
ACA1_089060	mRNA	ACA1_089060	NW_004457431.1	311995	313580	R	ACA1_089060	complement(join(<311995..312056,312135..312270,312334..312483,312605..312657,312752..312825,312955..>313580))	Acanthamoeba castellanii str. Neff	14917442
ACA1_089070	mRNA	ACA1_089070	NW_004457431.1	313770	314751	D	ACA1_089070	join(<313770..314022,314105..314208,314311..314384,314476..314625,314733..>314751)	Acanthamoeba castellanii str. Neff	14917443
ACA1_089080	mRNA	ACA1_089080	NW_004457431.1	314867	316904	D	ACA1_089080	join(<314867..315011,315079..315107,315170..315251,315419..315518,315614..315714,315791..315926,316044..316134,316220..316310,316396..316484,316572..316682,316797..>316904)	Acanthamoeba castellanii str. Neff	14917444
ACA1_089090	mRNA	ACA1_089090	NW_004457431.1	317152	319902	R	ACA1_089090	complement(join(<317152..317253,317324..317659,317743..317853,317960..318412,318505..318597,318660..318712,318996..>319902))	Acanthamoeba castellanii str. Neff	14917445
ACA1_089100	mRNA	ACA1_089100	NW_004457431.1	320757	322966	D	ACA1_089100	join(<320757..320865,320897..320928,321002..321104,321191..321342,321423..321550,321685..321827,321903..322345,322426..322611,322697..>322966)	Acanthamoeba castellanii str. Neff	14917446
ACA1_089110	mRNA	ACA1_089110	NW_004457431.1	323113	324019	R	ACA1_089110	complement(join(<323113..323763,323846..>324019))	Acanthamoeba castellanii str. Neff	14917410
ACA1_089120	mRNA	ACA1_089120	NW_004457431.1	324257	325295	R	ACA1_089120	complement(join(<324257..324445,324526..324707,324792..324858,324952..325055,325169..>325295))	Acanthamoeba castellanii str. Neff	14917411
ACA1_089130	mRNA	ACA1_089130	NW_004457431.1	325482	328216	D	ACA1_089130	join(<325482..325727,325942..326105,326192..326306,326378..326460,326535..326646,326715..326844,326939..327075,327153..327290,327382..327523,327593..327752,327825..327898,327975..>328216)	Acanthamoeba castellanii str. Neff	14917412
ACA1_089140	mRNA	ACA1_089140	NW_004457431.1	328460	331453	D	ACA1_089140	join(<328460..328729,328828..329011,329119..329305,329392..329486,329574..329673,329761..329852,329925..329983,330087..330159,330242..330302,330379..330513,330599..330716,330800..330967,331096..331159,331242..>331453)	Acanthamoeba castellanii str. Neff	14917413
ACA1_089150	mRNA	ACA1_089150	NW_004457431.1	331684	332683	D	ACA1_089150	join(<331684..331886,331969..332125,332276..332469,332557..>332683)	Acanthamoeba castellanii str. Neff	14917414
ACA1_089170	mRNA	ACA1_089170	NW_004457431.1	334762	336272	D	ACA1_089170	join(<334762..335907,335922..>336272)	Acanthamoeba castellanii str. Neff	14917416
ACA1_089180	mRNA	ACA1_089180	NW_004457431.1	336354	337078	R	ACA1_089180	complement(join(<336354..336488,336575..>337078))	Acanthamoeba castellanii str. Neff	14917417
ACA1_089190	mRNA	ACA1_089190	NW_004457431.1	337542	338156	R	ACA1_089190	complement(<337542..>338156)	Acanthamoeba castellanii str. Neff	14917418
ACA1_089200	mRNA	ACA1_089200	NW_004457431.1	338463	339914	R	ACA1_089200	complement(join(<338463..338534,338546..338636,338705..338906,339008..339099,339189..339402,339442..339621,339693..339789,339879..>339914))	Acanthamoeba castellanii str. Neff	14917419
ACA1_089210	mRNA	ACA1_089210	NW_004457431.1	340505	343328	R	ACA1_089210	complement(join(<340505..340632,340727..340778,340869..340950,341035..341162,341242..341298,341390..341516,341576..341663,341725..341851,341895..341974,342051..342147,342245..342317,342380..342519,342636..342720,342799..>343328))	Acanthamoeba castellanii str. Neff	14917420
ACA1_089220	mRNA	ACA1_089220	NW_004457431.1	343734	345234	R	ACA1_089220	complement(join(<343734..343907,343986..344100,344181..344263,344350..344502,344573..344622,344703..344853,344976..345075,345158..>345234))	Acanthamoeba castellanii str. Neff	14917421
ACA1_089230	mRNA	ACA1_089230	NW_004457431.1	345690	346017	D	ACA1_089230	join(<345690..345783,345905..>346017)	Acanthamoeba castellanii str. Neff	14917422
ACA1_089240	mRNA	ACA1_089240	NW_004457431.1	346137	346830	D	ACA1_089240	join(<346137..346398,346462..346570,346644..>346830)	Acanthamoeba castellanii str. Neff	14917423
ACA1_089250	mRNA	ACA1_089250	NW_004457431.1	347155	350011	D	ACA1_089250	join(<347155..347258,347355..347455,347540..347633,347753..347847,347936..347999,348090..348190,348287..348424,348515..348579,348640..348724,348803..348949,349028..349545,349648..349833,349913..>350011)	Acanthamoeba castellanii str. Neff	14917424
ACA1_089260	mRNA	ACA1_089260	NW_004457431.1	350094	352834	R	ACA1_089260	complement(join(<350094..350371,350384..350434,350530..350747,350814..350890,351074..351198,351269..351434,351517..351636,351881..352009,352094..352156,352297..352427,352557..352656,352787..>352834))	Acanthamoeba castellanii str. Neff	14917425
ACA1_089270	mRNA	ACA1_089270	NW_004457431.1	353212	354580	R	ACA1_089270	complement(join(<353212..353235,353334..353467,353557..353642,353728..353820,354190..354275,354344..>354580))	Acanthamoeba castellanii str. Neff	14917426
ACA1_089280	mRNA	ACA1_089280	NW_004457431.1	354727	355735	D	ACA1_089280	join(<354727..354864,354947..355045,355133..355256,355532..355617,355685..>355735)	Acanthamoeba castellanii str. Neff	14917427
ACA1_089290	mRNA	ACA1_089290	NW_004457431.1	355819	360360	R	ACA1_089290	complement(join(<355819..355998,356083..356219,356291..356421,356546..356679,356754..356879,356983..357234,357306..357432,357469..357535,357618..357819,357938..358047,358131..358268,358348..358456,358538..358630,358700..358804,358893..358990,359077..359235,359332..359489,359580..359740,359823..359881,359960..360112,360183..>360360))	Acanthamoeba castellanii str. Neff	14917428
ACA1_089300	mRNA	ACA1_089300	NW_004457431.1	361100	362015	D	ACA1_089300	join(<361100..361521,361631..361751,361896..>362015)	Acanthamoeba castellanii str. Neff	14917429
ACA1_089310	mRNA	ACA1_089310	NW_004457431.1	362144	363524	D	ACA1_089310	join(<362144..362331,362426..362820,362904..362987,363060..363202,363303..>363524)	Acanthamoeba castellanii str. Neff	14917384
ACA1_089320	mRNA	ACA1_089320	NW_004457431.1	363589	369713	R	ACA1_089320	complement(join(<363589..363703,363782..363937,364033..364190,364281..364425,364521..364724,364820..364881,365119..365203,365268..365338,365433..365510,365581..365666,365693..365790,365823..365916,366007..366112,366285..366389,366568..366676,366762..366832,366891..366989,367363..367494,367570..367669,367733..367830,367909..367996,368064..368176,368794..368852,369000..369055,369138..369292,369360..>369713))	Acanthamoeba castellanii str. Neff	14917385
ACA1_089330	mRNA	ACA1_089330	NW_004457431.1	370379	372315	R	ACA1_089330	complement(join(<370379..370548,370656..370779,370863..371022,371099..371218,371307..371413,371492..371572,371650..371795,371841..371855,371872..372045,372123..>372315))	Acanthamoeba castellanii str. Neff	14917386
ACA1_089440	mRNA	ACA1_089440	NW_004457431.1	372597	373638	D	ACA1_089440	join(<372597..372812,372900..373102,373188..373358,373452..>373638)	Acanthamoeba castellanii str. Neff	14917387
ACA1_089650	mRNA	ACA1_089650	NW_004457431.1	374982	376077	D	ACA1_089650	join(<374982..374990,375041..375170,375250..375350,375446..375514,375658..375993,376054..>376077)	Acanthamoeba castellanii str. Neff	14917388
ACA1_089760	mRNA	ACA1_089760	NW_004457431.1	376733	378915	R	ACA1_089760	complement(join(<376733..376902,377007..377130,377216..377375,377409..377496,377574..377766,377839..377927,378024..378222,378294..378439,378523..378628,378700..378804,378883..>378915))	Acanthamoeba castellanii str. Neff	14917389
ACA1_089770	mRNA	ACA1_089770	NW_004457431.1	379080	380811	R	ACA1_089770	complement(join(<379080..379223,379328..379418,379489..379634,379700..379888,379971..380072,380163..380480,380566..>380811))	Acanthamoeba castellanii str. Neff	14917390
ACA1_089780	mRNA	ACA1_089780	NW_004457431.1	380884	382315	D	ACA1_089780	join(<380884..380946,381091..381262,381335..381393,381476..381529,381600..381664,381763..381913,382013..382151,382218..>382315)	Acanthamoeba castellanii str. Neff	14917391
ACA1_089790	mRNA	ACA1_089790	NW_004457431.1	382481	383815	R	ACA1_089790	complement(join(<382481..382644,382762..382900,382978..383051,383142..383216,383336..383439,383574..>383815))	Acanthamoeba castellanii str. Neff	14917392
ACA1_089800	mRNA	ACA1_089800	NW_004457431.1	384221	385980	R	ACA1_089800	complement(join(<384221..384319,384413..384550,384638..384834,384927..385026,385155..385256,385338..385472,385578..385690,385815..>385980))	Acanthamoeba castellanii str. Neff	14917393
ACA1_089810	mRNA	ACA1_089810	NW_004457431.1	386685	391371	D	ACA1_089810	join(<386685..386756,386830..386874,386963..387170,387256..387385,387483..387645,387750..387953,388031..388144,388240..388454,388554..388692,388777..388842,388964..389134,389223..389397,389555..389636,389650..389928,390024..390108,390207..390556,390640..390708,390721..390844,390934..>391371)	Acanthamoeba castellanii str. Neff	14917394
ACA1_089820	mRNA	ACA1_089820	NW_004457431.1	391558	391929	D	ACA1_089820	<391558..>391929	Acanthamoeba castellanii str. Neff	14917395
ACA1_089830	mRNA	ACA1_089830	NW_004457431.1	392162	393593	D	ACA1_089830	join(<392162..392475,392544..392813,392913..393048,393144..393195,393274..>393593)	Acanthamoeba castellanii str. Neff	14917396
ACA1_089840	mRNA	ACA1_089840	NW_004457431.1	393847	395713	D	ACA1_089840	join(<393847..394247,394332..394448,394590..394760,394830..394966,395064..395139,395248..395360,395443..395574,395637..>395713)	Acanthamoeba castellanii str. Neff	14917397
ACA1_089850	mRNA	ACA1_089850	NW_004457431.1	395996	402551	R	ACA1_089850	complement(join(<395996..396559,396679..398886,398938..399729,399839..399908,400007..400103,400217..400451,400570..400888,400981..401328,401709..402324,402389..>402551))	Acanthamoeba castellanii str. Neff	14917398
ACA1_089960	mRNA	ACA1_089960	NW_004457431.1	402988	406024	R	ACA1_089960	complement(join(<402988..403074,403155..403254,403336..403482,403557..403686,403767..403854,403924..404042,404116..404271,404374..404447,404526..404705,404793..404880,404964..405072,405146..405279,405374..405511,405637..405748,405821..>406024))	Acanthamoeba castellanii str. Neff	14917399
ACA1_089970	mRNA	ACA1_089970	NW_004457431.1	406332	407776	R	ACA1_089970	complement(join(<406332..406694,406802..406885,406971..407028,407105..407210,407287..407386,407525..>407776))	Acanthamoeba castellanii str. Neff	14917400
ACA1_089980	mRNA	ACA1_089980	NW_004457431.1	407922	411136	R	ACA1_089980	complement(join(<407922..409728,409801..410147,410216..410312,410414..410662,410734..410886,410952..>411136))	Acanthamoeba castellanii str. Neff	14917401
ACA1_089990	mRNA	ACA1_089990	NW_004457431.1	411475	412324	D	ACA1_089990	join(<411475..411672,411709..411835,411900..>412324)	Acanthamoeba castellanii str. Neff	14917242
ACA1_090000	mRNA	ACA1_090000	NW_004457431.1	412668	413559	R	ACA1_090000	complement(join(<412668..412759,412826..412975,413187..>413559))	Acanthamoeba castellanii str. Neff	14917243
ACA1_090010	mRNA	ACA1_090010	NW_004457431.1	413861	415271	R	ACA1_090010	complement(join(<413861..414345,414599..414679,414776..>415271))	Acanthamoeba castellanii str. Neff	14917244
ACA1_090020	mRNA	ACA1_090020	NW_004457431.1	415813	416268	R	ACA1_090020	complement(join(<415813..416000,416070..>416268))	Acanthamoeba castellanii str. Neff	14917245
ACA1_090030	mRNA	ACA1_090030	NW_004457431.1	416820	419177	R	ACA1_090030	complement(join(<416820..416885,416976..417089,417174..417284,417357..417517,417586..417754,417823..417996,418065..418468,418593..418737,418799..418935,419042..>419177))	Acanthamoeba castellanii str. Neff	14917246
ACA1_090040	mRNA	ACA1_090040	NW_004457431.1	419447	420067	R	ACA1_090040	complement(join(<419447..419601,419679..419758,419840..419940,420014..>420067))	Acanthamoeba castellanii str. Neff	14917247
ACA1_090050	mRNA	ACA1_090050	NW_004457431.1	420306	421530	D	ACA1_090050	join(<420306..420383,420588..420632,420715..420841,420946..421069,421323..>421530)	Acanthamoeba castellanii str. Neff	14917248
ACA1_090060	mRNA	ACA1_090060	NW_004457431.1	421961	425326	D	ACA1_090060	join(<421961..422017,422193..422341,422428..422470,422583..422633,422746..422830,422914..422970,423071..423217,423389..423467,423621..423750,423842..423994,424084..424246,424385..424473,424560..424699,424819..424906,424985..425114,425184..>425326)	Acanthamoeba castellanii str. Neff	14917249
ACA1_090070	mRNA	ACA1_090070	NW_004457431.1	425367	425743	R	ACA1_090070	complement(join(<425367..425678,425723..>425743))	Acanthamoeba castellanii str. Neff	14917250
ACA1_090080	mRNA	ACA1_090080	NW_004457431.1	426118	428787	R	ACA1_090080	complement(join(<426118..427055,427182..427337,427631..427808,427921..428019,428118..428240,428332..428432,428492..428521,428622..>428787))	Acanthamoeba castellanii str. Neff	14917251
ACA1_090090	mRNA	ACA1_090090	NW_004457431.1	429000	431987	D	ACA1_090090	<429000..>431987	Acanthamoeba castellanii str. Neff	14917252
ACA1_090100	mRNA	ACA1_090100	NW_004457431.1	432615	436776	D	ACA1_090100	join(<432615..432641,432962..433440,433562..433683,433780..433875,433951..434026,434115..434172,434252..434357,434432..434475,434551..434633,434714..434827,434932..435049,435211..435279,435357..435404,435494..435519,435625..435735,435857..435944,436045..>436776)	Acanthamoeba castellanii str. Neff	14917253
ACA1_090110	mRNA	ACA1_090110	NW_004457431.1	437232	441840	D	ACA1_090110	join(<437232..437435,437699..437754,437864..438009,438098..438243,438330..438500,438600..438776,439176..439837,439927..440032,440110..440226,440304..440410,440522..440636,440750..440812,440891..441153,441232..441397,441463..>441840)	Acanthamoeba castellanii str. Neff	14917254
ACA1_090120	mRNA	ACA1_090120	NW_004457431.1	442027	442325	D	ACA1_090120	join(<442027..442173,442190..442255,442269..>442325)	Acanthamoeba castellanii str. Neff	14917255
ACA1_090130	mRNA	ACA1_090130	NW_004457431.1	442466	444887	D	ACA1_090130	join(<442466..442605,442680..442932,443039..443637,443701..443845,443921..444146,444255..444449,444512..444640,444718..>444887)	Acanthamoeba castellanii str. Neff	14917256
ACA1_090140	mRNA	ACA1_090140	NW_004457431.1	444979	446629	R	ACA1_090140	complement(join(<444979..445049,445155..445235,445342..445548,445624..445964,446143..446432,446510..>446629))	Acanthamoeba castellanii str. Neff	14917257
ACA1_090150	mRNA	ACA1_090150	NW_004457431.1	446860	448393	D	ACA1_090150	join(<446860..447310,447438..447572,447662..448185,448316..>448393)	Acanthamoeba castellanii str. Neff	14917258
ACA1_090160	mRNA	ACA1_090160	NW_004457431.1	448659	449683	R	ACA1_090160	complement(join(<448659..448796,448872..449312,449388..449503,449581..>449683))	Acanthamoeba castellanii str. Neff	14917259
ACA1_090170	mRNA	ACA1_090170	NW_004457431.1	451403	453702	D	ACA1_090170	join(<451403..451555,451652..451764,451835..451914,451983..452134,452233..452388,452457..452610,452677..452775,452868..452996,453121..453303,453377..>453702)	Acanthamoeba castellanii str. Neff	14917260
ACA1_090180	mRNA	ACA1_090180	NW_004457431.1	453827	455268	R	ACA1_090180	complement(join(<453827..453965,454032..454179,454247..454385,454642..454715,454798..454873,454968..455073,455129..>455268))	Acanthamoeba castellanii str. Neff	14917261
ACA1_090190	mRNA	ACA1_090190	NW_004457431.1	455419	456812	R	ACA1_090190	complement(join(<455419..455588,455653..455734,455824..455921,455982..456054,456130..456189,456261..456500,456561..>456812))	Acanthamoeba castellanii str. Neff	14917272
ACA1_090200	mRNA	ACA1_090200	NW_004457431.1	457245	458279	D	ACA1_090200	join(<457245..457511,457568..457722,457796..457902,457978..458081,458148..>458279)	Acanthamoeba castellanii str. Neff	14917273
ACA1_090210	mRNA	ACA1_090210	NW_004457431.1	458445	459054	R	ACA1_090210	complement(join(<458445..458594,458677..>459054))	Acanthamoeba castellanii str. Neff	14917274
ACA1_090220	mRNA	ACA1_090220	NW_004457431.1	459632	461761	R	ACA1_090220	complement(join(<459632..459832,459926..460042,460114..460311,460405..460505,460593..460709,460794..460888,460971..461074,461180..461307,461392..461500,461604..461638,461710..>461761))	Acanthamoeba castellanii str. Neff	14917275
ACA1_090230	mRNA	ACA1_090230	NW_004457431.1	462084	463382	D	ACA1_090230	join(<462084..462125,462243..462386,462465..462541,462642..462721,462804..462883,462974..463084,463185..>463382)	Acanthamoeba castellanii str. Neff	14917276
ACA1_090240	mRNA	ACA1_090240	NW_004457431.1	464291	465140	R	ACA1_090240	complement(join(<464291..464315,464394..464484,464545..464648,464743..>465140))	Acanthamoeba castellanii str. Neff	14917277
ACA1_090250	mRNA	ACA1_090250	NW_004457431.1	465858	467516	R	ACA1_090250	complement(join(<465858..465950,466067..466207,466293..466407,466548..466672,466814..467047,467127..467303,467394..>467516))	Acanthamoeba castellanii str. Neff	14917278
ACA1_090260	mRNA	ACA1_090260	NW_004457431.1	468085	470565	D	ACA1_090260	join(<468085..468232,468612..468902,469058..469202,469302..469359,469446..469568,469696..469762,469852..469980,470080..470172,470283..470302,470449..>470565)	Acanthamoeba castellanii str. Neff	14917279
ACA1_090270	mRNA	ACA1_090270	NW_004457431.1	471062	472264	D	ACA1_090270	<471062..>472264	Acanthamoeba castellanii str. Neff	14917280
ACA1_090280	mRNA	ACA1_090280	NW_004457431.1	472449	474269	R	ACA1_090280	complement(join(<472449..472609,472738..472816,473077..473307,473473..473572,473738..473865,473940..474001,474131..>474269))	Acanthamoeba castellanii str. Neff	14917281
ACA1_090290	mRNA	ACA1_090290	NW_004457431.1	474755	476046	R	ACA1_090290	complement(join(<474755..474851,474933..474989,475084..475189,475261..475374,475488..>476046))	Acanthamoeba castellanii str. Neff	14917282
ACA1_090300	mRNA	ACA1_090300	NW_004457431.1	481351	481776	D	ACA1_090300	<481351..>481776	Acanthamoeba castellanii str. Neff	14917283
ACA1_090310	mRNA	ACA1_090310	NW_004457431.1	482286	482678	D	ACA1_090310	join(<482286..482362,482396..>482678)	Acanthamoeba castellanii str. Neff	14917284
ACA1_090320	mRNA	ACA1_090320	NW_004457431.1	483743	484531	D	ACA1_090320	<483743..>484531	Acanthamoeba castellanii str. Neff	14917285
ACA1_090330	mRNA	ACA1_090330	NW_004457431.1	487371	488912	R	ACA1_090330	complement(join(<487371..487505,488250..488335,488424..488528,488640..488758,488830..>488912))	Acanthamoeba castellanii str. Neff	14917286
ACA1_090340	mRNA	ACA1_090340	NW_004457431.1	490571	491050	R	ACA1_090340	complement(join(<490571..490620,490719..490813,490845..>491050))	Acanthamoeba castellanii str. Neff	14917287
ACA1_090350	mRNA	ACA1_090350	NW_004457431.1	491779	492141	D	ACA1_090350	join(<491779..491787,491830..>492141)	Acanthamoeba castellanii str. Neff	14917288
ACA1_090360	mRNA	ACA1_090360	NW_004457431.1	492291	493191	D	ACA1_090360	join(<492291..492875,492979..>493191)	Acanthamoeba castellanii str. Neff	14917289
ACA1_090370	mRNA	ACA1_090370	NW_004457431.1	494787	496379	D	ACA1_090370	join(<494787..495114,495250..495545,495582..>496379)	Acanthamoeba castellanii str. Neff	14917290
ACA1_090380	mRNA	ACA1_090380	NW_004457431.1	496455	497206	R	ACA1_090380	complement(join(<496455..496541,496658..>497206))	Acanthamoeba castellanii str. Neff	14917291
ACA1_090400	mRNA	ACA1_090400	NW_004457431.1	498749	499401	R	ACA1_090400	complement(join(<498749..498932,498961..499228,499272..>499401))	Acanthamoeba castellanii str. Neff	14917293
ACA1_090410	mRNA	ACA1_090410	NW_004457431.1	499851	500327	D	ACA1_090410	<499851..>500327	Acanthamoeba castellanii str. Neff	14917294
ACA1_090420	mRNA	ACA1_090420	NW_004457431.1	501231	501734	R	ACA1_090420	complement(<501231..>501734)	Acanthamoeba castellanii str. Neff	14917295
ACA1_090430	mRNA	ACA1_090430	NW_004457431.1	502615	503275	D	ACA1_090430	join(<502615..502663,502718..502968,503036..>503275)	Acanthamoeba castellanii str. Neff	14917367
ACA1_167220	mRNA	ACA1_167220	NW_004457430.1	188	2437	D	ACA1_167220	join(<188..223,339..442,508..581,760..945,1050..1168,1249..1362,1431..1489,1556..1686,1761..1936,2068..2165,2231..2388,2421..>2437)	Acanthamoeba castellanii str. Neff	14917227
ACA1_167330	mRNA	ACA1_167330	NW_004457430.1	5955	6771	D	ACA1_167330	join(<5955..6210,6276..6308,6473..6585,6709..>6771)	Acanthamoeba castellanii str. Neff	14917238
ACA1_167340	mRNA	ACA1_167340	NW_004457430.1	7045	8477	D	ACA1_167340	join(<7045..7223,7311..7431,7571..7757,7892..8084,8129..8292,8380..>8477)	Acanthamoeba castellanii str. Neff	14917239
ACA1_167450	mRNA	ACA1_167450	NW_004457430.1	12355	12669	D	ACA1_167450	join(<12355..12477,12511..>12669)	Acanthamoeba castellanii str. Neff	14917240
ACA1_167460	mRNA	ACA1_167460	NW_004457430.1	13534	14086	R	ACA1_167460	complement(join(<13534..13553,13705..13830,13892..13970,14060..>14086))	Acanthamoeba castellanii str. Neff	14917241
ACA1_167570	mRNA	ACA1_167570	NW_004457430.1	17493	17873	R	ACA1_167570	complement(<17493..>17873)	Acanthamoeba castellanii str. Neff	14917228
ACA1_167580	mRNA	ACA1_167580	NW_004457430.1	18814	20624	D	ACA1_167580	join(<18814..18839,18996..19257,19327..19964,20051..>20624)	Acanthamoeba castellanii str. Neff	14917229
ACA1_167690	mRNA	ACA1_167690	NW_004457430.1	25539	26085	D	ACA1_167690	join(<25539..25609,25699..25820,25919..26022,26062..>26085)	Acanthamoeba castellanii str. Neff	14917230
ACA1_167800	mRNA	ACA1_167800	NW_004457430.1	30616	31564	D	ACA1_167800	join(<30616..30661,30811..30899,31016..31086,31162..31243,31355..>31564)	Acanthamoeba castellanii str. Neff	14917231
ACA1_167810	mRNA	ACA1_167810	NW_004457430.1	32693	33647	D	ACA1_167810	join(<32693..32713,32736..32817,32845..33148,33209..>33647)	Acanthamoeba castellanii str. Neff	14917232
ACA1_167820	mRNA	ACA1_167820	NW_004457430.1	34361	34696	R	ACA1_167820	complement(<34361..>34696)	Acanthamoeba castellanii str. Neff	14917233
ACA1_167930	mRNA	ACA1_167930	NW_004457430.1	39195	40223	D	ACA1_167930	join(<39195..39366,39493..39618,39686..39954,40053..>40223)	Acanthamoeba castellanii str. Neff	14917234
ACA1_168040	mRNA	ACA1_168040	NW_004457430.1	46743	47177	R	ACA1_168040	complement(join(<46743..46943,46980..>47177))	Acanthamoeba castellanii str. Neff	14917235
ACA1_168150	mRNA	ACA1_168150	NW_004457430.1	51690	51917	D	ACA1_168150	<51690..>51917	Acanthamoeba castellanii str. Neff	14917236
ACA1_168160	mRNA	ACA1_168160	NW_004457430.1	52718	53067	R	ACA1_168160	complement(join(<52718..52768,52783..52859,52948..52985,53039..>53067))	Acanthamoeba castellanii str. Neff	14917237
ACA1_146250	mRNA	ACA1_146250	NW_004457429.1	4811	5316	R	ACA1_146250	complement(join(<4811..4941,5124..>5316))	Acanthamoeba castellanii str. Neff	14917226
ACA1_146260	mRNA	ACA1_146260	NW_004457429.1	7218	7571	D	ACA1_146260	join(<7218..7306,7406..>7571)	Acanthamoeba castellanii str. Neff	14917201
ACA1_146270	mRNA	ACA1_146270	NW_004457429.1	7663	8345	R	ACA1_146270	complement(join(<7663..7955,8129..>8345))	Acanthamoeba castellanii str. Neff	14917202
ACA1_146280	mRNA	ACA1_146280	NW_004457429.1	9595	10419	D	ACA1_146280	join(<9595..9955,10049..>10419)	Acanthamoeba castellanii str. Neff	14917200
ACA1_146290	mRNA	ACA1_146290	NW_004457429.1	13101	13828	D	ACA1_146290	join(<13101..13183,13297..>13828)	Acanthamoeba castellanii str. Neff	14917195
ACA1_146400	mRNA	ACA1_146400	NW_004457429.1	15741	16924	R	ACA1_146400	complement(join(<15741..15958,16189..16259,16375..16423,16798..>16924))	Acanthamoeba castellanii str. Neff	14917196
ACA1_146410	mRNA	ACA1_146410	NW_004457429.1	17520	18662	R	ACA1_146410	complement(join(<17520..17670,17774..17841,17856..17942,18050..18136,18229..18257,18366..18454,18646..>18662))	Acanthamoeba castellanii str. Neff	14917197
ACA1_146420	mRNA	ACA1_146420	NW_004457429.1	18724	19645	R	ACA1_146420	complement(join(<18724..18936,19023..19129,19198..19315,19619..>19645))	Acanthamoeba castellanii str. Neff	14917198
ACA1_146430	mRNA	ACA1_146430	NW_004457429.1	22090	24465	R	ACA1_146430	complement(join(<22090..22302,22385..22491,22570..22710,22818..22907,22993..23132,23234..23423,23531..23770,23875..24109,24208..>24465))	Acanthamoeba castellanii str. Neff	14917199
ACA1_146440	mRNA	ACA1_146440	NW_004457429.1	25131	26654	D	ACA1_146440	join(<25131..25343,25427..25533,25632..25683,25754..25834,25930..25978,26049..26105,26179..26238,26308..>26654)	Acanthamoeba castellanii str. Neff	14917210
ACA1_146450	mRNA	ACA1_146450	NW_004457429.1	27399	28104	D	ACA1_146450	join(<27399..27522,27589..27638,27714..27826,27852..>28104)	Acanthamoeba castellanii str. Neff	14917211
ACA1_146460	mRNA	ACA1_146460	NW_004457429.1	28250	29340	R	ACA1_146460	complement(join(<28250..28324,28399..28461,28685..28760,28848..29091,29151..>29340))	Acanthamoeba castellanii str. Neff	14917212
ACA1_146470	mRNA	ACA1_146470	NW_004457429.1	29389	30051	R	ACA1_146470	complement(join(<29389..29512,29614..29744,29794..29945,30012..>30051))	Acanthamoeba castellanii str. Neff	14917213
ACA1_146480	mRNA	ACA1_146480	NW_004457429.1	30512	32051	R	ACA1_146480	complement(join(<30512..30835,30898..31025,31096..31240,31412..31489,31568..31702,31776..>32051))	Acanthamoeba castellanii str. Neff	14917214
ACA1_146490	mRNA	ACA1_146490	NW_004457429.1	32147	32946	R	ACA1_146490	complement(join(<32147..32383,32467..>32946))	Acanthamoeba castellanii str. Neff	14917215
ACA1_146500	mRNA	ACA1_146500	NW_004457429.1	33379	36981	R	ACA1_146500	complement(join(<33379..33439,33518..33657,33726..33820,33909..34008,34088..34184,34266..34345,34436..34522,34617..34709,34783..34866,34941..35021,35117..35221,35312..35616,35709..35786,35905..35995,36087..36218,36330..36413,36493..36575,36679..36823,36910..>36981))	Acanthamoeba castellanii str. Neff	14917203
ACA1_146510	mRNA	ACA1_146510	NW_004457429.1	37347	38546	R	ACA1_146510	complement(join(<37347..37409,37489..37533,37613..37711,37797..37982,38061..>38546))	Acanthamoeba castellanii str. Neff	14917204
ACA1_146520	mRNA	ACA1_146520	NW_004457429.1	39313	41410	D	ACA1_146520	join(<39313..39766,39863..40020,40103..40188,40264..40342,40414..40530,40613..40675,40792..40896,40975..41052,41126..41215,41294..>41410)	Acanthamoeba castellanii str. Neff	14917205
ACA1_146530	mRNA	ACA1_146530	NW_004457429.1	42187	46343	D	ACA1_146530	join(<42187..42227,42435..42538,42628..42695,42834..42974,43057..43139,43216..43273,43374..43478,43552..43618,43697..43776,43855..43970,44052..44102,44213..44335,44424..44532,44619..44690,44771..44839,44944..45000,45081..45158,45243..45299,45375..45558,45668..45727,45789..45943,46043..46104,46154..>46343)	Acanthamoeba castellanii str. Neff	14917206
ACA1_146540	mRNA	ACA1_146540	NW_004457429.1	46983	49481	D	ACA1_146540	join(<46983..47162,47244..47352,47443..47552,47640..47867,48019..48186,48266..48392,48467..48593,48662..48771,48832..48969,49053..49153,49224..>49481)	Acanthamoeba castellanii str. Neff	14917207
ACA1_146550	mRNA	ACA1_146550	NW_004457429.1	49536	56356	R	ACA1_146550	complement(join(<49536..50105,50192..50522,50623..50722,50794..51009,51174..51348,51431..51519,51591..51724,51819..52035,52106..52165,52244..52334,52416..52554,52630..52692,52779..52861,52966..53087,53170..53269,53349..53435,53497..53552,53615..53681,53747..53812,53902..54034,54112..54213,54306..54459,54540..54619,54692..54786,54854..54946,55014..55116,55183..55241,55320..55486,55586..55678,55974..56108,56281..>56356))	Acanthamoeba castellanii str. Neff	14917208
ACA1_146560	mRNA	ACA1_146560	NW_004457429.1	57619	58072	D	ACA1_146560	join(<57619..57698,57901..>58072)	Acanthamoeba castellanii str. Neff	14917209
ACA1_146570	mRNA	ACA1_146570	NW_004457429.1	58135	59674	D	ACA1_146570	join(<58135..58210,58275..58529,58656..58935,59020..59139,59227..>59674)	Acanthamoeba castellanii str. Neff	14917216
ACA1_146580	mRNA	ACA1_146580	NW_004457429.1	59814	60764	D	ACA1_146580	join(<59814..59838,59934..60007,60088..60298,60421..60488,60558..>60764)	Acanthamoeba castellanii str. Neff	14917217
ACA1_146590	mRNA	ACA1_146590	NW_004457429.1	60820	62346	R	ACA1_146590	complement(join(<60820..61005,61080..61175,61302..61449,61547..61610,61691..61783,61866..>62346))	Acanthamoeba castellanii str. Neff	14917218
ACA1_146600	mRNA	ACA1_146600	NW_004457429.1	62575	68880	R	ACA1_146600	complement(join(<62575..62661,62736..62967,63085..63465,63602..63808,63914..64022,64125..64470,64560..65025,65117..65349,65465..65583,65664..65763,65855..65941,66012..66067,66167..66336,66431..66495,66570..66711,66782..66938,67045..67386,67470..67549,67620..67764,67919..68002,68086..68166,68265..68369,68682..>68880))	Acanthamoeba castellanii str. Neff	14917219
ACA1_146610	mRNA	ACA1_146610	NW_004457429.1	69463	76281	D	ACA1_146610	join(<69463..69643,69945..70004,70257..70358,70443..70523,70627..70710,70823..70976,71056..71114,71196..71251,71417..71705,71799..71955,72045..72186,72265..72426,72495..72564,72653..72708,72797..72883,72983..73082,73177..73295,73415..73647,73754..74219,74347..74692,74842..74950,75057..75263,75406..75786,75859..76090,76174..>76281)	Acanthamoeba castellanii str. Neff	14917220
ACA1_146620	mRNA	ACA1_146620	NW_004457429.1	76385	77025	R	ACA1_146620	complement(join(<76385..76469,76560..76617,76693..76879,76984..>77025))	Acanthamoeba castellanii str. Neff	14917221
ACA1_146630	mRNA	ACA1_146630	NW_004457429.1	77182	80940	D	ACA1_146630	join(<77182..77644,77742..77799,77888..78024,78150..78314,78382..78470,78580..78631,78717..78784,78817..78973,79053..79142,79213..79305,79388..79486,79586..79740,79820..80129,80225..80329,80430..80566,80686..80756,80850..>80940)	Acanthamoeba castellanii str. Neff	14917222
ACA1_146640	mRNA	ACA1_146640	NW_004457429.1	81104	83455	R	ACA1_146640	complement(join(<81104..81667,81743..81916,81982..82341,82403..82517,82594..82750,82837..82969,83038..83168,83269..>83455))	Acanthamoeba castellanii str. Neff	14917223
ACA1_146660	mRNA	ACA1_146660	NW_004457429.1	85007	87638	R	ACA1_146660	complement(join(<85007..85114,85235..85320,85381..85572,85658..85725,85780..85868,85950..86002,86126..86260,86363..86453,86568..86661,86743..86854,87004..87097,87206..87279,87429..87518,87620..>87638))	Acanthamoeba castellanii str. Neff	14917225
ACA1_001860	mRNA	ACA1_001860	NW_004457428.1	4365	4676	D	ACA1_001860	join(<4365..4468,4562..>4676)	Acanthamoeba castellanii str. Neff	14917191
ACA1_001870	mRNA	ACA1_001870	NW_004457428.1	4857	5251	D	ACA1_001870	join(<4857..5015,5093..>5251)	Acanthamoeba castellanii str. Neff	14917192
ACA1_001980	mRNA	ACA1_001980	NW_004457428.1	12003	12533	D	ACA1_001980	join(<12003..12113,12183..>12533)	Acanthamoeba castellanii str. Neff	14917193
ACA1_001990	mRNA	ACA1_001990	NW_004457428.1	12814	13417	D	ACA1_001990	join(<12814..12834,12931..13366,13398..>13417)	Acanthamoeba castellanii str. Neff	14917194
ACA1_348950	mRNA	ACA1_348950	NW_004457427.1	12645	17906	R	ACA1_348950	complement(join(<12645..12841,12916..13075,13157..13251,13365..13549,13661..13731,13777..13824,13982..14293,14397..14500,14645..14752,14845..14938,15043..15189,15279..15406,15480..15586,15681..15797,15893..16015,16170..16297,16459..16524,16684..16861,16954..17081,17183..17253,17447..17516,17593..17753,17822..>17906))	Acanthamoeba castellanii str. Neff	14917184
ACA1_348960	mRNA	ACA1_348960	NW_004457427.1	18276	20119	R	ACA1_348960	complement(join(<18276..18353,18422..18530,18638..18732,18817..19072,19180..19385,19549..19713,19835..>20119))	Acanthamoeba castellanii str. Neff	14917190
ACA1_348970	mRNA	ACA1_348970	NW_004457427.1	20512	22879	D	ACA1_348970	join(<20512..20946,21075..21203,21301..22092,22186..22278,22381..22493,22578..22698,22775..>22879)	Acanthamoeba castellanii str. Neff	14917183
ACA1_348980	mRNA	ACA1_348980	NW_004457427.1	23010	23643	D	ACA1_348980	join(<23010..23107,23202..23268,23353..23478,23572..>23643)	Acanthamoeba castellanii str. Neff	14917185
ACA1_349090	mRNA	ACA1_349090	NW_004457427.1	26248	27737	R	ACA1_349090	complement(join(<26248..26283,26297..26583,26686..27172,27288..>27737))	Acanthamoeba castellanii str. Neff	14917186
ACA1_349100	mRNA	ACA1_349100	NW_004457427.1	27964	29515	R	ACA1_349100	complement(join(<27964..28178,28207..28372,28386..28436,28468..28560,28677..28792,28875..29137,29230..29362,29455..>29515))	Acanthamoeba castellanii str. Neff	14917187
ACA1_349110	mRNA	ACA1_349110	NW_004457427.1	29548	29918	R	ACA1_349110	complement(join(<29548..29651,29762..>29918))	Acanthamoeba castellanii str. Neff	14917188
ACA1_349120	mRNA	ACA1_349120	NW_004457427.1	30170	32339	R	ACA1_349120	complement(join(<30170..30243,30416..30524,30550..30813,30950..31102,31204..31296,31411..31526,31609..31906,32028..>32339))	Acanthamoeba castellanii str. Neff	14917189
ACA1_307000	mRNA	ACA1_307000	NW_004457426.1	1269	1692	R	ACA1_307000	complement(join(<1269..1478,1540..>1692))	Acanthamoeba castellanii str. Neff	14917182
ACA1_307010	mRNA	ACA1_307010	NW_004457426.1	2403	2828	R	ACA1_307010	complement(join(<2403..2589,2713..>2828))	Acanthamoeba castellanii str. Neff	14917178
ACA1_307020	mRNA	ACA1_307020	NW_004457426.1	4649	5041	R	ACA1_307020	complement(join(<4649..4811,4839..>5041))	Acanthamoeba castellanii str. Neff	14917179
ACA1_307130	mRNA	ACA1_307130	NW_004457426.1	8510	8825	D	ACA1_307130	join(<8510..8623,8691..>8825)	Acanthamoeba castellanii str. Neff	14917180
ACA1_307140	mRNA	ACA1_307140	NW_004457426.1	9529	9954	R	ACA1_307140	complement(<9529..>9954)	Acanthamoeba castellanii str. Neff	14917181
ACA1_002300	mRNA	ACA1_002300	NW_004457425.1	897	6184	D	ACA1_002300	join(<897..1128,1334..1415,1529..1685,1759..1866,1941..2003,2085..2264,2340..2445,2550..2657,2737..3075,3147..3342,3439..3554,3630..3834,3915..4171,4249..4421,4501..4725,4821..4935,5030..5156,5236..5560,5669..>6184)	Acanthamoeba castellanii str. Neff	14917175
ACA1_002310	mRNA	ACA1_002310	NW_004457425.1	6355	7569	R	ACA1_002310	complement(join(<6355..6399,6413..6528,6609..6722,6826..6995,7209..7360,7417..7437,7531..>7569))	Acanthamoeba castellanii str. Neff	14917177
ACA1_002320	mRNA	ACA1_002320	NW_004457425.1	8384	10891	D	ACA1_002320	join(<8384..9130,9236..9356,9465..9599,9664..9794,9878..9991,10095..10244,10313..10409,10485..10657,10748..>10891)	Acanthamoeba castellanii str. Neff	14917176
ACA1_002330	mRNA	ACA1_002330	NW_004457425.1	11108	12160	R	ACA1_002330	complement(join(<11108..11739,11872..>12160))	Acanthamoeba castellanii str. Neff	14917174
ACA1_033890	mRNA	ACA1_033890	NW_004457424.1	308	778	R	ACA1_033890	complement(join(<308..419,535..617,713..>778))	Acanthamoeba castellanii str. Neff	14917164
ACA1_033900	mRNA	ACA1_033900	NW_004457424.1	1298	2152	R	ACA1_033900	complement(<1298..>2152)	Acanthamoeba castellanii str. Neff	14917172
ACA1_033910	mRNA	ACA1_033910	NW_004457424.1	2367	3495	R	ACA1_033910	complement(join(<2367..2566,2672..2763,2838..2918,2986..3063,3155..3226,3300..3348,3438..>3495))	Acanthamoeba castellanii str. Neff	14917173
ACA1_034020	mRNA	ACA1_034020	NW_004457424.1	6067	6348	D	ACA1_034020	<6067..>6348	Acanthamoeba castellanii str. Neff	14917154
ACA1_034030	mRNA	ACA1_034030	NW_004457424.1	7445	9569	D	ACA1_034030	join(<7445..7755,7857..7932,8007..8148,8166..8353,8443..8537,8639..8712,8835..8888,8999..9067,9181..9347,9471..>9569)	Acanthamoeba castellanii str. Neff	14917155
ACA1_034040	mRNA	ACA1_034040	NW_004457424.1	9771	10794	D	ACA1_034040	join(<9771..9926,9993..10085,10172..10532,10625..>10794)	Acanthamoeba castellanii str. Neff	14917156
ACA1_034050	mRNA	ACA1_034050	NW_004457424.1	11360	12062	R	ACA1_034050	complement(join(<11360..11587,11757..>12062))	Acanthamoeba castellanii str. Neff	14917157
ACA1_034060	mRNA	ACA1_034060	NW_004457424.1	12299	13022	D	ACA1_034060	join(<12299..12352,12461..12552,12626..12761,12927..>13022)	Acanthamoeba castellanii str. Neff	14917158
ACA1_034070	mRNA	ACA1_034070	NW_004457424.1	13156	15403	D	ACA1_034070	join(<13156..13212,13349..13549,13710..14252,14319..14383,14519..14702,14820..14905,14978..15106,15316..>15403)	Acanthamoeba castellanii str. Neff	14917159
ACA1_034080	mRNA	ACA1_034080	NW_004457424.1	15563	20631	R	ACA1_034080	complement(join(<15563..15727,15828..16030,16124..16302,16391..16527,16753..16826,16959..17049,17171..17310,17393..17502,17608..17678,17805..17900,18075..18179,18287..18436,18723..18811,18961..19033,19127..19288,19395..19436,19532..20227,20404..>20631))	Acanthamoeba castellanii str. Neff	14917160
ACA1_034090	mRNA	ACA1_034090	NW_004457424.1	20931	24498	R	ACA1_034090	complement(join(<20931..21671,21750..21976,22071..22218,22308..22446,22560..22846,22990..23174,23256..>24498))	Acanthamoeba castellanii str. Neff	14917161
ACA1_034100	mRNA	ACA1_034100	NW_004457424.1	25060	25540	D	ACA1_034100	join(<25060..25152,25250..>25540)	Acanthamoeba castellanii str. Neff	14917162
ACA1_034110	mRNA	ACA1_034110	NW_004457424.1	25924	26717	R	ACA1_034110	complement(join(<25924..26146,26221..26295,26356..26454,26521..26608,26678..>26717))	Acanthamoeba castellanii str. Neff	14917163
ACA1_034120	mRNA	ACA1_034120	NW_004457424.1	26934	29312	D	ACA1_034120	join(<26934..27414,27509..27587,27746..27839,27927..28003,28131..28216,28313..28370,28458..28529,28654..28739,28989..29077,29160..>29312)	Acanthamoeba castellanii str. Neff	14917165
ACA1_034130	mRNA	ACA1_034130	NW_004457424.1	29404	32361	R	ACA1_034130	complement(join(<29404..30050,30134..30205,30301..30424,30493..30587,30705..31016,31125..31324,31407..31592,31680..31762,31864..31888,31985..32075,32175..>32361))	Acanthamoeba castellanii str. Neff	14917166
ACA1_034140	mRNA	ACA1_034140	NW_004457424.1	32787	34807	R	ACA1_034140	complement(join(<32787..32927,33010..33085,33147..33253,33332..33432,33501..33663,33727..33769,33854..33951,34008..34120,34180..34215,34303..34393,34458..34540,34612..>34807))	Acanthamoeba castellanii str. Neff	14917167
ACA1_034150	mRNA	ACA1_034150	NW_004457424.1	35364	36612	R	ACA1_034150	complement(join(<35364..35650,35724..35853,35925..36121,36183..36366,36472..>36612))	Acanthamoeba castellanii str. Neff	14917168
ACA1_034160	mRNA	ACA1_034160	NW_004457424.1	36859	38381	D	ACA1_034160	join(<36859..37054,37170..37460,37551..37645,37670..37868,37948..38129,38199..>38381)	Acanthamoeba castellanii str. Neff	14917169
ACA1_034170	mRNA	ACA1_034170	NW_004457424.1	38897	45237	D	ACA1_034170	join(<38897..39220,39297..39347,39414..39512,39582..39787,39865..39947,40023..40138,40201..40424,40507..40642,40705..40800,40881..41072,41158..41326,41406..41509,41592..41718,41783..41859,41923..42072,42114..42260,42342..42448,42525..42655,42824..42946,43028..43147,43221..43463,43537..43748,43821..43970,44065..44424,44502..44620,44695..44828,44918..>45237)	Acanthamoeba castellanii str. Neff	14917170
ACA1_104670	mRNA	ACA1_104670	NW_004457423.1	133	594	R	ACA1_104670	complement(join(<133..158,239..298,384..>594))	Acanthamoeba castellanii str. Neff	14917147
ACA1_104780	mRNA	ACA1_104780	NW_004457423.1	820	942	D	ACA1_104780	<820..>942	Acanthamoeba castellanii str. Neff	14917153
ACA1_104790	mRNA	ACA1_104790	NW_004457423.1	1376	2154	D	ACA1_104790	join(<1376..1688,1782..1892,1991..>2154)	Acanthamoeba castellanii str. Neff	14917148
ACA1_104800	mRNA	ACA1_104800	NW_004457423.1	2647	3187	R	ACA1_104800	complement(join(<2647..2698,2774..2858,2961..3058,3141..>3187))	Acanthamoeba castellanii str. Neff	14917149
ACA1_104910	mRNA	ACA1_104910	NW_004457423.1	7540	9358	R	ACA1_104910	complement(join(<7540..7548,7651..7739,7835..7975,8035..8107,8196..8347,8445..8631,8732..>9358))	Acanthamoeba castellanii str. Neff	14917150
ACA1_104920	mRNA	ACA1_104920	NW_004457423.1	9661	10154	R	ACA1_104920	complement(join(<9661..9683,9722..>10154))	Acanthamoeba castellanii str. Neff	14917151
ACA1_105030	mRNA	ACA1_105030	NW_004457423.1	15672	16040	D	ACA1_105030	join(<15672..15809,15918..>16040)	Acanthamoeba castellanii str. Neff	14917152
ACA1_020770	mRNA	ACA1_020770	NW_004457422.1	415	4603	D	ACA1_020770	join(<415..546,796..982,1126..1272,1387..1508,1659..1913,2066..2158,2244..2418,2560..2696,2842..2994,3072..3317,3437..3508,3615..3809,3920..4068,4138..>4603)	Acanthamoeba castellanii str. Neff	14917143
ACA1_020780	mRNA	ACA1_020780	NW_004457422.1	5078	8509	R	ACA1_020780	complement(join(<5078..5338,5439..5586,5695..5805,5924..6047,6214..6332,6429..6543,6676..6859,6954..7212,7260..7444,7544..7620,7730..7835,7937..8093,8211..>8509))	Acanthamoeba castellanii str. Neff	14917138
ACA1_020790	mRNA	ACA1_020790	NW_004457422.1	9295	10154	D	ACA1_020790	join(<9295..9340,9395..9535,9610..9681,9796..9867,9994..>10154)	Acanthamoeba castellanii str. Neff	14917139
ACA1_020800	mRNA	ACA1_020800	NW_004457422.1	10369	13744	D	ACA1_020800	join(<10369..10442,10597..10645,10710..10834,10901..10939,10999..11127,11245..11311,11541..11658,11715..11797,11859..11989,12050..12184,12284..12305,12369..12479,12663..12746,12817..12883,13119..13260,13359..13448,13579..13585,13637..>13744)	Acanthamoeba castellanii str. Neff	14917140
ACA1_020810	mRNA	ACA1_020810	NW_004457422.1	13717	14344	R	ACA1_020810	complement(join(<13717..13926,14042..>14344))	Acanthamoeba castellanii str. Neff	14917141
ACA1_020820	mRNA	ACA1_020820	NW_004457422.1	14554	15546	D	ACA1_020820	join(<14554..14810,14928..15276,15376..>15546)	Acanthamoeba castellanii str. Neff	14917142
ACA1_020830	mRNA	ACA1_020830	NW_004457422.1	15963	19019	R	ACA1_020830	complement(join(<15963..16126,16273..16426,16783..16858,16993..17160,17271..17383,17509..17600,17689..17944,18020..18201,18302..18457,18592..18738,18911..>19019))	Acanthamoeba castellanii str. Neff	14917128
ACA1_020840	mRNA	ACA1_020840	NW_004457422.1	16793	18608	D	ACA1_020840	join(<16793..16866,17028..17118,17694..17948,18038..18160,18312..18446,18588..>18608)	Acanthamoeba castellanii str. Neff	14917130
ACA1_020850	mRNA	ACA1_020850	NW_004457422.1	19638	25819	R	ACA1_020850	complement(join(<19638..19700,19761..19837,19947..20111,20247..20343,20450..20539,20661..20744,20832..20897,20985..21213,21315..21551,21649..24028,24277..>25819))	Acanthamoeba castellanii str. Neff	14917129
ACA1_020860	mRNA	ACA1_020860	NW_004457422.1	27182	28834	D	ACA1_020860	join(<27182..27478,27560..27637,27891..27963,28053..28152,28268..28347,28434..28535,28650..>28834)	Acanthamoeba castellanii str. Neff	14917131
ACA1_020870	mRNA	ACA1_020870	NW_004457422.1	29103	30427	D	ACA1_020870	join(<29103..29288,29390..29432,29520..29634,29721..29829,29977..30081,30173..>30427)	Acanthamoeba castellanii str. Neff	14917132
ACA1_020880	mRNA	ACA1_020880	NW_004457422.1	30690	31518	D	ACA1_020880	join(<30690..30828,30927..31114,31213..>31518)	Acanthamoeba castellanii str. Neff	14917133
ACA1_020900	mRNA	ACA1_020900	NW_004457422.1	33267	35774	R	ACA1_020900	complement(join(<33267..33308,33521..33591,33658..33763,33861..33949,34056..34134,34306..34451,34546..34586,34705..34780,34848..34959,35035..35104,35244..35395,35643..>35774))	Acanthamoeba castellanii str. Neff	14917135
ACA1_020910	mRNA	ACA1_020910	NW_004457422.1	36313	42578	D	ACA1_020910	join(<36313..36334,36596..37740,37819..37932,38005..38159,38241..38748,38845..39340,39431..39567,39729..39838,39934..40106,40185..40387,40504..40669,40995..41260,41354..41557,41658..41800,41913..42033,42227..42359,42451..>42578)	Acanthamoeba castellanii str. Neff	14917136
ACA1_020920	mRNA	ACA1_020920	NW_004457422.1	43252	44366	D	ACA1_020920	join(<43252..43810,43907..44072,44168..>44366)	Acanthamoeba castellanii str. Neff	14917137
ACA1_020930	mRNA	ACA1_020930	NW_004457422.1	44576	45587	R	ACA1_020930	complement(join(<44576..44711,44826..44893,44977..45047,45194..45331,45476..>45587))	Acanthamoeba castellanii str. Neff	14917144
ACA1_020940	mRNA	ACA1_020940	NW_004457422.1	46567	49802	D	ACA1_020940	join(<46567..46752,46856..46926,47019..47332,47411..47559,47679..47826,47943..48079,48236..48472,48561..48644,48757..48841,48929..48997,49101..49231,49295..49381,49557..49593,49705..>49802)	Acanthamoeba castellanii str. Neff	14917145
ACA1_020950	mRNA	ACA1_020950	NW_004457422.1	50120	51876	R	ACA1_020950	complement(join(<50120..50253,50348..50467,50602..50785,50875..50978,51110..51235,51439..51561,51735..>51876))	Acanthamoeba castellanii str. Neff	14917146
ACA1_028650	mRNA	ACA1_028650	NW_004457421.1	614	2083	R	ACA1_028650	complement(join(<614..729,872..923,1047..1125,1225..1280,1465..1886,2050..>2083))	Acanthamoeba castellanii str. Neff	14917117
ACA1_028670	mRNA	ACA1_028670	NW_004457421.1	5146	6767	D	ACA1_028670	join(<5146..5229,5379..5525,5601..5668,5739..5892,6139..6184,6268..6431,6516..>6767)	Acanthamoeba castellanii str. Neff	14917124
ACA1_028680	mRNA	ACA1_028680	NW_004457421.1	7647	10364	D	ACA1_028680	join(<7647..7674,7780..7892,8043..8107,8234..8377,8520..8610,8711..8826,8924..9001,9126..9159,9259..9343,9452..9513,9609..>10364)	Acanthamoeba castellanii str. Neff	14917125
ACA1_028690	mRNA	ACA1_028690	NW_004457421.1	10607	12742	R	ACA1_028690	complement(join(<10607..10731,10861..11057,11139..11198,11260..11340,11430..11560,11668..11939,12045..12153,12398..12472,12626..>12742))	Acanthamoeba castellanii str. Neff	14917126
ACA1_028700	mRNA	ACA1_028700	NW_004457421.1	13599	20453	D	ACA1_028700	join(<13599..13703,13846..13913,14049..14118,14289..14342,14443..14504,14592..14755,14945..15082,15166..15284,15343..15440,15547..15616,15713..15814,15966..16113,16179..16321,16425..16557,16646..17698,17803..17882,17948..18106,18175..18400,18526..18629,18714..18893,18986..19173,19262..19457,19540..19581,19676..19741,19812..19887,19991..20067,20164..20271,20364..>20453)	Acanthamoeba castellanii str. Neff	14917127
ACA1_028710	mRNA	ACA1_028710	NW_004457421.1	20631	20938	R	ACA1_028710	complement(join(<20631..20683,20803..>20938))	Acanthamoeba castellanii str. Neff	14917119
ACA1_028720	mRNA	ACA1_028720	NW_004457421.1	21528	23071	R	ACA1_028720	complement(join(<21528..21647,21729..21856,21939..22067,22145..22213,22330..22405,22521..22637,22741..22853,22927..>23071))	Acanthamoeba castellanii str. Neff	14917120
ACA1_028730	mRNA	ACA1_028730	NW_004457421.1	23360	24849	R	ACA1_028730	complement(join(<23360..23422,23538..23653,23751..23834,23918..24042,24146..>24849))	Acanthamoeba castellanii str. Neff	14917121
ACA1_028740	mRNA	ACA1_028740	NW_004457421.1	25363	27189	D	ACA1_028740	join(<25363..25456,25554..25594,25685..25741,25828..25971,26295..26540,26834..26906,27008..27048,27137..>27189)	Acanthamoeba castellanii str. Neff	14917122
ACA1_028850	mRNA	ACA1_028850	NW_004457421.1	30726	31082	D	ACA1_028850	<30726..>31082	Acanthamoeba castellanii str. Neff	14917123
ACA1_028960	mRNA	ACA1_028960	NW_004457421.1	31979	36265	D	ACA1_028960	join(<31979..32273,33169..33263,33323..33619,34461..34483,34506..34693,34770..34908,34996..35149,35543..35713,35798..35914,36018..36115,36187..>36265)	Acanthamoeba castellanii str. Neff	14917116
ACA1_359580	mRNA	ACA1_359580	NW_004457420.1	13129	14675	R	ACA1_359580	complement(join(<13129..13196,13286..14095,14174..14282,14386..14520,14583..>14675))	Acanthamoeba castellanii str. Neff	14917114
ACA1_359590	mRNA	ACA1_359590	NW_004457420.1	15067	17906	R	ACA1_359590	complement(join(<15067..15135,15196..15308,15431..15647,15742..15900,16067..16122,16199..16328,16418..16761,16889..17153,17244..17407,17513..17644,17734..17792,17878..>17906))	Acanthamoeba castellanii str. Neff	14917115
ACA1_009480	mRNA	ACA1_009480	NW_004457419.1	520	5713	D	ACA1_009480	join(<520..813,934..1000,1084..1157,1240..1341,3103..3174,3277..3411,3538..3648,3831..3893,5336..5480,5500..5516,5642..>5713)	Acanthamoeba castellanii str. Neff	14917112
ACA1_009790	mRNA	ACA1_009790	NW_004457419.1	11969	12492	D	ACA1_009790	join(<11969..12128,12188..12300,12361..>12492)	Acanthamoeba castellanii str. Neff	14917113
ACA1_320520	mRNA	ACA1_320520	NW_004457418.1	45	2934	R	ACA1_320520	complement(join(<45..331,468..634,735..865,991..1100,1216..2499,2637..>2934))	Acanthamoeba castellanii str. Neff	14917105
ACA1_320530	mRNA	ACA1_320530	NW_004457418.1	3924	6951	R	ACA1_320530	complement(join(<3924..3950,3999..4201,4351..4412,4504..4585,4679..4742,4811..4901,5087..5164,5250..5331,5464..5596,5716..6634,6755..>6951))	Acanthamoeba castellanii str. Neff	14917101
ACA1_320540	mRNA	ACA1_320540	NW_004457418.1	7496	9006	R	ACA1_320540	complement(join(<7496..7554,7657..7741,7899..7968,8087..8164,8334..8426,8518..8595,8906..>9006))	Acanthamoeba castellanii str. Neff	14917102
ACA1_320550	mRNA	ACA1_320550	NW_004457418.1	9395	11368	R	ACA1_320550	complement(join(<9395..9471,9550..9600,9708..9804,9918..10044,10178..10293,10462..10566,10668..10802,10910..10994,11087..11200,11283..>11368))	Acanthamoeba castellanii str. Neff	14917103
ACA1_320560	mRNA	ACA1_320560	NW_004457418.1	11576	13836	D	ACA1_320560	join(<11576..11711,11849..12000,12209..12271,12372..12468,12921..13539,13650..>13836)	Acanthamoeba castellanii str. Neff	14917099
ACA1_320570	mRNA	ACA1_320570	NW_004457418.1	13858	19018	D	ACA1_320570	join(<13858..13878,13967..14095,14238..14292,14403..14518,14744..14783,14918..15051,15234..15312,15487..15555,15701..15796,15991..16085,16207..16275,16379..16493,16630..16697,16835..16906,17096..17173,17203..17297,18001..18023,18158..18207,18414..18519,18780..18827,18948..>19018)	Acanthamoeba castellanii str. Neff	14917100
ACA1_320780	mRNA	ACA1_320780	NW_004457418.1	19205	20686	D	ACA1_320780	join(<19205..19643,19762..19799,20036..20197,20295..20326,20428..>20686)	Acanthamoeba castellanii str. Neff	14917106
ACA1_320790	mRNA	ACA1_320790	NW_004457418.1	20839	23760	R	ACA1_320790	complement(join(<20839..21163,21343..21487,21768..22059,22288..22475,22608..22658,22829..22914,23074..23173,23252..23316,23427..23487,23556..>23760))	Acanthamoeba castellanii str. Neff	14917107
ACA1_320800	mRNA	ACA1_320800	NW_004457418.1	23991	24367	R	ACA1_320800	complement(join(<23991..24010,24103..>24367))	Acanthamoeba castellanii str. Neff	14917108
ACA1_320810	mRNA	ACA1_320810	NW_004457418.1	24952	28514	D	ACA1_320810	join(<24952..25091,25265..25290,25406..25573,25731..25879,26031..26108,26314..26650,26801..26898,27130..27154,27293..27455,27649..27698,27857..27980,28104..28191,28353..>28514)	Acanthamoeba castellanii str. Neff	14917109
ACA1_320820	mRNA	ACA1_320820	NW_004457418.1	28846	29498	D	ACA1_320820	join(<28846..28962,29088..29287,29396..>29498)	Acanthamoeba castellanii str. Neff	14917110
ACA1_320830	mRNA	ACA1_320830	NW_004457418.1	30058	32381	D	ACA1_320830	join(<30058..30103,30175..30264,30366..30476,30625..30720,30844..30926,31127..31255,31356..31455,31559..31631,31754..31878,32019..32157,32258..>32381)	Acanthamoeba castellanii str. Neff	14917111
ACA1_320840	mRNA	ACA1_320840	NW_004457418.1	32765	37513	D	ACA1_320840	join(<32765..32871,33011..33068,33131..33271,33468..33624,33802..33995,34085..34222,34327..34430,34644..34720,34792..34929,35111..35240,35558..35747,35858..36031,36193..36294,36599..36742,36838..37056,37105..37275,37355..>37513)	Acanthamoeba castellanii str. Neff	14917104
ACA1_352150	mRNA	ACA1_352150	NW_004457417.1	140	936	D	ACA1_352150	join(<140..178,287..313,521..646,886..>936)	Acanthamoeba castellanii str. Neff	14917086
ACA1_352260	mRNA	ACA1_352260	NW_004457417.1	1666	1830	R	ACA1_352260	complement(<1666..>1830)	Acanthamoeba castellanii str. Neff	14917093
ACA1_352370	mRNA	ACA1_352370	NW_004457417.1	2225	3847	D	ACA1_352370	join(<2225..2343,2422..2512,2588..2699,2778..2824,2941..3070,3180..3253,3321..3388,3489..3639,3660..3673,3742..>3847)	Acanthamoeba castellanii str. Neff	14917094
ACA1_352380	mRNA	ACA1_352380	NW_004457417.1	5002	5658	R	ACA1_352380	complement(join(<5002..5118,5464..>5658))	Acanthamoeba castellanii str. Neff	14917095
ACA1_352400	mRNA	ACA1_352400	NW_004457417.1	8314	12953	R	ACA1_352400	complement(join(<8314..8547,8667..8804,8924..9042,9143..9233,9333..9409,9549..9684,9768..9863,9964..10112,10208..10261,10369..10479,10568..10633,10733..10841,10963..11074,11141..11319,11388..11531,11673..11751,11844..11917,12007..12044,12143..12233,12319..12379,12475..12512,12603..12680,12786..>12953))	Acanthamoeba castellanii str. Neff	14917097
ACA1_352410	mRNA	ACA1_352410	NW_004457417.1	13611	14507	D	ACA1_352410	join(<13611..13991,14240..14306,14419..>14507)	Acanthamoeba castellanii str. Neff	14917098
ACA1_352420	mRNA	ACA1_352420	NW_004457417.1	14738	16304	R	ACA1_352420	complement(join(<14738..14836,14933..15066,15192..15329,15420..15525,15620..15787,15878..16032,16157..>16304))	Acanthamoeba castellanii str. Neff	14917087
ACA1_352430	mRNA	ACA1_352430	NW_004457417.1	16463	18347	D	ACA1_352430	join(<16463..16807,16874..16947,17043..17523,17589..17723,17813..18205,18234..>18347)	Acanthamoeba castellanii str. Neff	14917088
ACA1_352440	mRNA	ACA1_352440	NW_004457417.1	18682	19263	D	ACA1_352440	join(<18682..18780,18841..18884,18982..19090,19174..>19263)	Acanthamoeba castellanii str. Neff	14917089
ACA1_352450	mRNA	ACA1_352450	NW_004457417.1	19365	19625	D	ACA1_352450	join(<19365..19526,19584..>19625)	Acanthamoeba castellanii str. Neff	14917090
ACA1_352460	mRNA	ACA1_352460	NW_004457417.1	20138	26503	D	ACA1_352460	join(<20138..20260,20298..20646,20719..20868,20957..21231,21276..21504,21587..22182,22258..22377,22467..22586,22794..22848,23001..23145,23260..23378,23468..23628,23728..23925,24026..24196,24282..24576,24651..24721,24830..24902,24984..25117,25213..25302,25380..25479,25566..25704,25774..26018,26129..26289,26387..>26503)	Acanthamoeba castellanii str. Neff	14917091
ACA1_352470	mRNA	ACA1_352470	NW_004457417.1	26748	27569	D	ACA1_352470	<26748..>27569	Acanthamoeba castellanii str. Neff	14917092
ACA1_352480	mRNA	ACA1_352480	NW_004457417.1	27593	29162	R	ACA1_352480	complement(join(<27593..27789,27910..28080,28169..28326,28433..28525,28628..28800,28941..29042,29127..>29162))	Acanthamoeba castellanii str. Neff	14917082
ACA1_352500	mRNA	ACA1_352500	NW_004457417.1	36659	38079	D	ACA1_352500	join(<36659..36814,36886..37219,37285..37359,37428..37573,37759..>38079)	Acanthamoeba castellanii str. Neff	14917084
ACA1_352510	mRNA	ACA1_352510	NW_004457417.1	38309	42997	D	ACA1_352510	join(<38309..38530,38600..38769,38835..38988,39071..39192,39314..39436,39538..39820,39922..40017,40119..40233,40336..40547,40622..40777,40872..41000,41073..41234,41307..41444,41588..41899,41975..>42997)	Acanthamoeba castellanii str. Neff	14917085
ACA1_046970	mRNA	ACA1_046970	NW_004457416.1	204	8795	D	ACA1_046970	join(<204..355,451..635,756..992,1121..1300,1556..2164,2289..2655,2667..2910,2979..3271,3283..3292,5244..5683,5976..6795,8031..>8795)	Acanthamoeba castellanii str. Neff	14917077
ACA1_047290	mRNA	ACA1_047290	NW_004457416.1	13041	17599	R	ACA1_047290	complement(join(<13041..14154,14304..14548,14692..14964,15137..15892,16027..16297,16467..16636,16775..>17599))	Acanthamoeba castellanii str. Neff	14917076
ACA1_047400	mRNA	ACA1_047400	NW_004457416.1	21253	22027	R	ACA1_047400	complement(join(<21253..21316,21390..21714,21949..>22027))	Acanthamoeba castellanii str. Neff	14917067
ACA1_047410	mRNA	ACA1_047410	NW_004457416.1	22094	22918	R	ACA1_047410	complement(join(<22094..22143,22184..22479,22620..>22918))	Acanthamoeba castellanii str. Neff	14917065
ACA1_047520	mRNA	ACA1_047520	NW_004457416.1	25386	26087	R	ACA1_047520	complement(join(<25386..25396,25634..25847,25980..>26087))	Acanthamoeba castellanii str. Neff	14917066
ACA1_047630	mRNA	ACA1_047630	NW_004457416.1	28602	35491	R	ACA1_047630	complement(join(<28602..29703,29794..30038,30188..30451,30592..31398,31507..31846,31936..32105,32200..32499,32584..33209,33354..33906,34049..34147,34357..34773,34871..35205,35338..>35491))	Acanthamoeba castellanii str. Neff	14917073
ACA1_047640	mRNA	ACA1_047640	NW_004457416.1	35955	43038	R	ACA1_047640	complement(join(<35955..35975,36005..36152,36281..36594,36737..37046,37122..37414,37521..38137,38355..38966,39280..39459,39594..39830,39953..40166,40277..40600,40768..41218,41318..41477,41614..41841,41971..42151,42412..42802,42950..>43038))	Acanthamoeba castellanii str. Neff	14917074
ACA1_047650	mRNA	ACA1_047650	NW_004457416.1	43386	43970	R	ACA1_047650	complement(<43386..>43970)	Acanthamoeba castellanii str. Neff	14917075
ACA1_047660	mRNA	ACA1_047660	NW_004457416.1	52321	52710	R	ACA1_047660	complement(join(<52321..52467,52540..>52710))	Acanthamoeba castellanii str. Neff	14917078
ACA1_047670	mRNA	ACA1_047670	NW_004457416.1	53933	54183	R	ACA1_047670	complement(join(<53933..53977,53998..>54183))	Acanthamoeba castellanii str. Neff	14917079
ACA1_047790	mRNA	ACA1_047790	NW_004457416.1	60160	60549	D	ACA1_047790	join(<60160..60186,60358..>60549)	Acanthamoeba castellanii str. Neff	14917068
ACA1_047800	mRNA	ACA1_047800	NW_004457416.1	64007	66308	D	ACA1_047800	join(<64007..64058,64778..64936,65616..65699,66094..>66308)	Acanthamoeba castellanii str. Neff	14917069
ACA1_047810	mRNA	ACA1_047810	NW_004457416.1	66660	67097	D	ACA1_047810	<66660..>67097	Acanthamoeba castellanii str. Neff	14917070
ACA1_047820	mRNA	ACA1_047820	NW_004457416.1	67455	70316	D	ACA1_047820	join(<67455..67543,67700..68090,68271..68457,68595..68822,68977..69169,69223..69673,69930..>70316)	Acanthamoeba castellanii str. Neff	14917071
ACA1_047930	mRNA	ACA1_047930	NW_004457416.1	73246	76242	D	ACA1_047930	join(<73246..73589,73742..73992,74169..74306,74406..74740,74868..74957,74974..75285,75445..75547,75656..>76242)	Acanthamoeba castellanii str. Neff	14917072
ACA1_201770	mRNA	ACA1_201770	NW_004457415.1	142	744	D	ACA1_201770	join(<142..421,620..>744)	Acanthamoeba castellanii str. Neff	14917064
ACA1_201880	mRNA	ACA1_201880	NW_004457415.1	6166	6889	D	ACA1_201880	join(<6166..6500,6586..>6889)	Acanthamoeba castellanii str. Neff	14916987
ACA1_201890	mRNA	ACA1_201890	NW_004457415.1	6992	7913	D	ACA1_201890	join(<6992..7082,7181..7277,7345..7632,7660..7717,7881..>7913)	Acanthamoeba castellanii str. Neff	14916988
ACA1_202000	mRNA	ACA1_202000	NW_004457415.1	10878	16995	D	ACA1_202000	join(<10878..11218,11338..11425,11873..11932,12024..12067,12158..12237,12329..12414,12505..12600,12693..12829,12896..13028,13091..13219,13325..13448,13531..13625,13710..13813,13881..14049,14170..14243,14353..14471,14546..14615,14684..14760,14841..14914,15041..15144,15231..15389,15476..15629,15728..15922,16072..16153,16245..16327,16410..16498,16608..16675,16799..16890,16945..>16995)	Acanthamoeba castellanii str. Neff	14916989
ACA1_202110	mRNA	ACA1_202110	NW_004457415.1	17100	19019	D	ACA1_202110	join(<17100..17133,17312..17394,17459..17617,17687..17738,18242..18321,18454..18519,18612..18762,18850..>19019)	Acanthamoeba castellanii str. Neff	14916990
ACA1_202120	mRNA	ACA1_202120	NW_004457415.1	19117	20900	D	ACA1_202120	join(<19117..19462,19596..19748,19854..19959,20047..20204,20288..20413,20544..20611,20694..20759,20857..>20900)	Acanthamoeba castellanii str. Neff	14916991
ACA1_202230	mRNA	ACA1_202230	NW_004457415.1	21805	22871	R	ACA1_202230	complement(join(<21805..21877,21894..22082,22238..22347,22440..22554,22656..22834,22845..>22871))	Acanthamoeba castellanii str. Neff	14916992
ACA1_202240	mRNA	ACA1_202240	NW_004457415.1	23088	23394	R	ACA1_202240	complement(join(<23088..23171,23290..>23394))	Acanthamoeba castellanii str. Neff	14917028
ACA1_202250	mRNA	ACA1_202250	NW_004457415.1	25086	27548	D	ACA1_202250	join(<25086..25123,25334..25442,25495..25599,25674..25784,26075..26185,26258..26314,26378..26456,26533..26606,26679..26830,26896..26977,27034..27172,27258..27339,27446..>27548)	Acanthamoeba castellanii str. Neff	14916956
ACA1_202360	mRNA	ACA1_202360	NW_004457415.1	27708	29413	D	ACA1_202360	join(<27708..27746,27872..28495,28601..>29413)	Acanthamoeba castellanii str. Neff	14916957
ACA1_202370	mRNA	ACA1_202370	NW_004457415.1	29509	32706	R	ACA1_202370	complement(join(<29509..29590,29789..30842,30934..31033,31104..31243,31315..31418,31513..31592,31663..32132,32227..32277,32355..32487,32572..>32706))	Acanthamoeba castellanii str. Neff	14916958
ACA1_202380	mRNA	ACA1_202380	NW_004457415.1	33099	33593	R	ACA1_202380	complement(join(<33099..33155,33176..33200,33211..>33593))	Acanthamoeba castellanii str. Neff	14916959
ACA1_202390	mRNA	ACA1_202390	NW_004457415.1	34203	36785	D	ACA1_202390	join(<34203..34956,35053..35112,35222..35436,35510..35736,35813..35918,35994..36150,36232..>36785)	Acanthamoeba castellanii str. Neff	14916960
ACA1_202400	mRNA	ACA1_202400	NW_004457415.1	37026	38995	D	ACA1_202400	join(<37026..37242,37302..37409,37520..37618,37711..37803,37927..38152,38191..38346,38424..38577,38668..38713,38790..>38995)	Acanthamoeba castellanii str. Neff	14916961
ACA1_202410	mRNA	ACA1_202410	NW_004457415.1	39280	40104	D	ACA1_202410	join(<39280..39354,39490..39583,39722..>40104)	Acanthamoeba castellanii str. Neff	14916962
ACA1_202420	mRNA	ACA1_202420	NW_004457415.1	41008	42627	D	ACA1_202420	join(<41008..41203,41407..41583,41700..41849,41969..>42627)	Acanthamoeba castellanii str. Neff	14916963
ACA1_202430	mRNA	ACA1_202430	NW_004457415.1	43304	44025	R	ACA1_202430	complement(join(<43304..43540,43611..43697,43822..>44025))	Acanthamoeba castellanii str. Neff	14916964
ACA1_202440	mRNA	ACA1_202440	NW_004457415.1	44091	46726	D	ACA1_202440	join(<44091..44180,44257..44396,44524..44677,44742..44853,44958..45110,45220..45369,45487..45675,45748..45913,46027..46230,46312..>46726)	Acanthamoeba castellanii str. Neff	14916965
ACA1_202450	mRNA	ACA1_202450	NW_004457415.1	46789	51825	R	ACA1_202450	complement(join(<46789..47651,47737..47858,47972..48113,48200..48279,48338..48429,48530..48640,48719..48794,48893..48998,49036..49169,49257..49319,49403..49507,49595..49730,49832..50006,50111..50220,50330..50454,50566..50628,50716..50808,50841..50851,50894..50995,51089..51182,51253..51378,51497..>51825))	Acanthamoeba castellanii str. Neff	14916966
ACA1_202460	mRNA	ACA1_202460	NW_004457415.1	52867	54173	D	ACA1_202460	join(<52867..53442,53529..53775,53846..54013,54112..>54173)	Acanthamoeba castellanii str. Neff	14916967
ACA1_202470	mRNA	ACA1_202470	NW_004457415.1	54717	57501	D	ACA1_202470	join(<54717..54825,54907..55022,55104..55184,55285..57285,57388..>57501)	Acanthamoeba castellanii str. Neff	14917012
ACA1_202490	mRNA	ACA1_202490	NW_004457415.1	62126	64198	D	ACA1_202490	<62126..>64198	Acanthamoeba castellanii str. Neff	14917014
ACA1_202500	mRNA	ACA1_202500	NW_004457415.1	66130	66441	D	ACA1_202500	<66130..>66441	Acanthamoeba castellanii str. Neff	14917015
ACA1_202510	mRNA	ACA1_202510	NW_004457415.1	67076	67830	R	ACA1_202510	complement(join(<67076..67204,67234..>67830))	Acanthamoeba castellanii str. Neff	14917016
ACA1_202520	mRNA	ACA1_202520	NW_004457415.1	68199	68319	D	ACA1_202520	join(<68199..68301,68312..>68319)	Acanthamoeba castellanii str. Neff	14917017
ACA1_202530	mRNA	ACA1_202530	NW_004457415.1	68540	69611	D	ACA1_202530	join(<68540..68727,69028..69321,69389..>69611)	Acanthamoeba castellanii str. Neff	14917018
ACA1_202640	mRNA	ACA1_202640	NW_004457415.1	69987	70392	R	ACA1_202640	complement(join(<69987..70146,70166..>70392))	Acanthamoeba castellanii str. Neff	14917019
ACA1_202650	mRNA	ACA1_202650	NW_004457415.1	70485	71067	R	ACA1_202650	complement(join(<70485..70829,70840..>71067))	Acanthamoeba castellanii str. Neff	14917020
ACA1_202660	mRNA	ACA1_202660	NW_004457415.1	72116	72433	R	ACA1_202660	complement(join(<72116..72180,72271..>72433))	Acanthamoeba castellanii str. Neff	14917021
ACA1_202670	mRNA	ACA1_202670	NW_004457415.1	73523	73852	D	ACA1_202670	<73523..>73852	Acanthamoeba castellanii str. Neff	14917022
ACA1_202680	mRNA	ACA1_202680	NW_004457415.1	74099	78412	R	ACA1_202680	complement(join(<74099..74354,74444..74546,74608..75467,75570..75710,75797..75919,76128..76510,76616..76765,76888..76978,77127..77235,77329..77410,77522..77628,77800..>78412))	Acanthamoeba castellanii str. Neff	14917023
ACA1_202690	mRNA	ACA1_202690	NW_004457415.1	79149	83039	D	ACA1_202690	join(<79149..79226,79295..79378,79463..79518,79601..79752,79821..80007,80078..80237,80321..80411,80489..81379,81501..81742,81836..82809,82835..>83039)	Acanthamoeba castellanii str. Neff	14917024
ACA1_202700	mRNA	ACA1_202700	NW_004457415.1	83234	85067	R	ACA1_202700	complement(join(<83234..83341,83463..83597,83669..83936,84040..84201,84350..84416,84516..84620,84796..84884,84997..>85067))	Acanthamoeba castellanii str. Neff	14917025
ACA1_202710	mRNA	ACA1_202710	NW_004457415.1	86485	91307	D	ACA1_202710	join(<86485..86591,86712..87225,87247..87532,87616..87683,88287..88357,88434..88505,88581..88712,88818..88920,89017..89160,89451..89636,89883..90182,90286..90501,90621..90728,90813..90912,91024..91177,91262..>91307)	Acanthamoeba castellanii str. Neff	14917026
ACA1_202720	mRNA	ACA1_202720	NW_004457415.1	91565	92468	D	ACA1_202720	join(<91565..91842,91917..92035,92106..92288,92407..>92468)	Acanthamoeba castellanii str. Neff	14917027
ACA1_202730	mRNA	ACA1_202730	NW_004457415.1	92577	99518	R	ACA1_202730	complement(join(<92577..92845,92951..93256,93347..94116,94212..94587,94692..94981,95055..95380,95468..95512,95594..95710,95807..96314,96405..96988,97088..97168,97241..97353,97422..97666,97758..97896,98029..98185,98271..98567,98889..99193,99458..>99518))	Acanthamoeba castellanii str. Neff	14917029
ACA1_202740	mRNA	ACA1_202740	NW_004457415.1	99888	101776	R	ACA1_202740	complement(join(<99888..100480,100555..100639,100711..100793,100867..101013,101082..101163,101225..>101776))	Acanthamoeba castellanii str. Neff	14917030
ACA1_202750	mRNA	ACA1_202750	NW_004457415.1	102481	103092	D	ACA1_202750	join(<102481..102577,102696..102772,102837..102948,103031..>103092)	Acanthamoeba castellanii str. Neff	14917031
ACA1_202760	mRNA	ACA1_202760	NW_004457415.1	103501	105673	D	ACA1_202760	join(<103501..103607,103776..103891,104079..104810,104937..>105673)	Acanthamoeba castellanii str. Neff	14917032
ACA1_202770	mRNA	ACA1_202770	NW_004457415.1	105877	106520	R	ACA1_202770	complement(join(<105877..106110,106196..106342,106434..>106520))	Acanthamoeba castellanii str. Neff	14917033
ACA1_202880	mRNA	ACA1_202880	NW_004457415.1	107850	108721	R	ACA1_202880	complement(join(<107850..108134,108231..108370,108427..>108721))	Acanthamoeba castellanii str. Neff	14917034
ACA1_203000	mRNA	ACA1_203000	NW_004457415.1	113091	115958	D	ACA1_203000	join(<113091..113391,113440..113611,113727..113855,113942..114012,114110..114207,114286..114393,114500..114777,114927..115272,115369..115511,115577..115703,115800..>115958)	Acanthamoeba castellanii str. Neff	14917036
ACA1_203010	mRNA	ACA1_203010	NW_004457415.1	116131	119275	D	ACA1_203010	join(<116131..116804,116911..117069,117185..117347,117425..117512,117643..117821,117867..117986,118076..118180,118277..118327,118426..118629,118755..118974,119109..>119275)	Acanthamoeba castellanii str. Neff	14917037
ACA1_203020	mRNA	ACA1_203020	NW_004457415.1	122120	124289	R	ACA1_203020	complement(join(<122120..122284,122368..122486,122583..122990,123066..123203,123280..123429,123515..123698,123793..123957,124038..>124289))	Acanthamoeba castellanii str. Neff	14917038
ACA1_203030	mRNA	ACA1_203030	NW_004457415.1	124573	126438	R	ACA1_203030	complement(join(<124573..124685,124771..124840,124926..124987,125066..125190,125255..125560,125650..125800,126008..126083,126126..126238,126306..>126438))	Acanthamoeba castellanii str. Neff	14917039
ACA1_203040	mRNA	ACA1_203040	NW_004457415.1	126815	128552	R	ACA1_203040	complement(join(<126815..127112,127191..127605,127679..>128552))	Acanthamoeba castellanii str. Neff	14917040
ACA1_203050	mRNA	ACA1_203050	NW_004457415.1	129078	130837	R	ACA1_203050	complement(join(<129078..129105,129179..129254,129326..129477,129727..129789,129857..129959,130063..130195,130289..130378,130459..130541,130617..130679,130777..>130837))	Acanthamoeba castellanii str. Neff	14917041
ACA1_203060	mRNA	ACA1_203060	NW_004457415.1	131188	134281	D	ACA1_203060	join(<131188..131525,131581..131766,131886..132031,132098..132204,132276..132825,132916..133101,133182..133288,133376..133481,133570..134008,134131..>134281)	Acanthamoeba castellanii str. Neff	14917042
ACA1_203070	mRNA	ACA1_203070	NW_004457415.1	134375	136403	D	ACA1_203070	join(<134375..134467,134606..134949,135030..135151,135261..135341,135437..135536,135630..135753,135868..135996,136103..136181,136267..>136403)	Acanthamoeba castellanii str. Neff	14917043
ACA1_203080	mRNA	ACA1_203080	NW_004457415.1	137222	140509	R	ACA1_203080	complement(join(<137222..137773,137814..138134,138208..138372,138481..139018,139033..139150,139248..139477,139578..139913,139981..140155,140254..>140509))	Acanthamoeba castellanii str. Neff	14917044
ACA1_203090	mRNA	ACA1_203090	NW_004457415.1	141073	144629	D	ACA1_203090	join(<141073..141196,141275..141372,141505..141553,141662..141726,141814..141900,141978..142044,142125..142185,142320..142336,142418..142499,142587..142652,142722..142876,143004..143061,143173..143302,143391..143484,143645..143793,143944..144007,144109..144398,144492..>144629)	Acanthamoeba castellanii str. Neff	14917045
ACA1_203100	mRNA	ACA1_203100	NW_004457415.1	144808	145417	R	ACA1_203100	complement(join(<144808..145039,145104..>145417))	Acanthamoeba castellanii str. Neff	14917046
ACA1_203110	mRNA	ACA1_203110	NW_004457415.1	146247	146908	D	ACA1_203110	join(<146247..146398,146527..>146908)	Acanthamoeba castellanii str. Neff	14917047
ACA1_203120	mRNA	ACA1_203120	NW_004457415.1	147089	148993	D	ACA1_203120	join(<147089..147187,147309..147460,147539..147643,147744..147912,148022..148109,148227..148840,148907..>148993)	Acanthamoeba castellanii str. Neff	14917048
ACA1_203130	mRNA	ACA1_203130	NW_004457415.1	149167	151153	D	ACA1_203130	join(<149167..149301,149389..149440,149531..149625,149774..150011,150092..150273,150365..150436,150539..150610,150679..150827,150949..>151153)	Acanthamoeba castellanii str. Neff	14917049
ACA1_203140	mRNA	ACA1_203140	NW_004457415.1	151247	154001	D	ACA1_203140	join(<151247..151606,151834..151941,152079..152163,152259..152440,152543..152629,152757..152879,152977..153028,153138..153246,153338..153608,153715..153817,153907..>154001)	Acanthamoeba castellanii str. Neff	14917050
ACA1_203150	mRNA	ACA1_203150	NW_004457415.1	154117	154617	R	ACA1_203150	complement(join(<154117..154335,154465..>154617))	Acanthamoeba castellanii str. Neff	14917051
ACA1_203160	mRNA	ACA1_203160	NW_004457415.1	154996	158644	D	ACA1_203160	join(<154996..155106,155242..155314,155439..155519,155606..155667,155760..155822,155918..156058,156154..156385,156494..156642,156774..157034,157151..157897,158020..158184,158449..158586,158636..>158644)	Acanthamoeba castellanii str. Neff	14917052
ACA1_203270	mRNA	ACA1_203270	NW_004457415.1	158890	160600	D	ACA1_203270	join(<158890..159198,159292..159457,159604..159830,159927..160032,160125..>160600)	Acanthamoeba castellanii str. Neff	14917053
ACA1_203280	mRNA	ACA1_203280	NW_004457415.1	160860	162946	D	ACA1_203280	join(<160860..161016,161179..161249,161369..161463,161645..161721,161853..161932,162161..162215,162331..162401,162507..162578,162656..162712,162809..>162946)	Acanthamoeba castellanii str. Neff	14917054
ACA1_203490	mRNA	ACA1_203490	NW_004457415.1	164716	166103	R	ACA1_203490	complement(join(<164716..164985,165157..165271,165387..165562,165681..>166103))	Acanthamoeba castellanii str. Neff	14917055
ACA1_203500	mRNA	ACA1_203500	NW_004457415.1	166582	168806	R	ACA1_203500	complement(join(<166582..166671,166782..167042,167117..167519,167566..167767,167840..168020,168169..168348,168418..168662,168764..>168806))	Acanthamoeba castellanii str. Neff	14917056
ACA1_203510	mRNA	ACA1_203510	NW_004457415.1	169012	171197	D	ACA1_203510	join(<169012..169209,169306..169471,169607..169732,169812..169919,169997..170514,170706..>171197)	Acanthamoeba castellanii str. Neff	14917057
ACA1_203620	mRNA	ACA1_203620	NW_004457415.1	171357	172713	D	ACA1_203620	join(<171357..171496,171568..171721,171826..171891,172006..172093,172182..172356,172611..>172713)	Acanthamoeba castellanii str. Neff	14917058
ACA1_203630	mRNA	ACA1_203630	NW_004457415.1	173095	178039	D	ACA1_203630	join(<173095..173289,173352..173501,173648..173827,173932..174403,174496..174924,175089..175511,175692..176044,176154..176252,176373..176536,176663..177062,177166..177299,177392..177613,177685..177890,177981..>178039)	Acanthamoeba castellanii str. Neff	14917059
ACA1_203640	mRNA	ACA1_203640	NW_004457415.1	178230	178556	R	ACA1_203640	complement(<178230..>178556)	Acanthamoeba castellanii str. Neff	14917060
ACA1_203650	mRNA	ACA1_203650	NW_004457415.1	179094	181025	R	ACA1_203650	complement(join(<179094..179219,179325..179795,179832..180423,180559..>181025))	Acanthamoeba castellanii str. Neff	14917061
ACA1_203660	mRNA	ACA1_203660	NW_004457415.1	182029	184797	R	ACA1_203660	complement(join(<182029..182230,182351..182550,182666..182787,182865..182997,183119..183262,183340..183482,183745..183904,184003..184122,184207..184320,184429..184567,184667..>184797))	Acanthamoeba castellanii str. Neff	14917062
ACA1_203670	mRNA	ACA1_203670	NW_004457415.1	185736	186233	D	ACA1_203670	<185736..>186233	Acanthamoeba castellanii str. Neff	14917063
ACA1_203680	mRNA	ACA1_203680	NW_004457415.1	186499	187034	D	ACA1_203680	join(<186499..186932,186950..>187034)	Acanthamoeba castellanii str. Neff	14916993
ACA1_203690	mRNA	ACA1_203690	NW_004457415.1	187125	187810	R	ACA1_203690	complement(join(<187125..187222,187302..187646,187714..>187810))	Acanthamoeba castellanii str. Neff	14916994
ACA1_203700	mRNA	ACA1_203700	NW_004457415.1	188341	189294	R	ACA1_203700	complement(join(<188341..188359,188393..188959,189098..>189294))	Acanthamoeba castellanii str. Neff	14916995
ACA1_203710	mRNA	ACA1_203710	NW_004457415.1	190571	191379	R	ACA1_203710	complement(join(<190571..190912,191017..191117,191235..>191379))	Acanthamoeba castellanii str. Neff	14916996
ACA1_203720	mRNA	ACA1_203720	NW_004457415.1	191720	195760	R	ACA1_203720	complement(join(<191720..191845,191931..192005,192085..192145,192244..192467,192559..192672,192767..192867,192989..193133,193236..193334,193435..193775,193861..193998,194079..194178,194247..194370,194472..194695,194756..195438,195685..>195760))	Acanthamoeba castellanii str. Neff	14916997
ACA1_203740	mRNA	ACA1_203740	NW_004457415.1	201513	203630	D	ACA1_203740	join(<201513..201716,201806..201995,202126..202299,202434..202513,202608..202758,202962..203167,203248..203366,203486..>203630)	Acanthamoeba castellanii str. Neff	14916999
ACA1_203750	mRNA	ACA1_203750	NW_004457415.1	203939	206892	R	ACA1_203750	complement(join(<203939..204149,204237..204406,204503..204617,204698..204756,204853..204951,205154..205180,205284..205365,205505..205601,205757..205836,205918..206009,206166..206274,206421..206515,206667..206848,206865..>206892))	Acanthamoeba castellanii str. Neff	14917000
ACA1_203760	mRNA	ACA1_203760	NW_004457415.1	207623	208244	D	ACA1_203760	join(<207623..207635,207764..207976,208048..>208244)	Acanthamoeba castellanii str. Neff	14917001
ACA1_203770	mRNA	ACA1_203770	NW_004457415.1	210115	210704	D	ACA1_203770	join(<210115..210477,210549..>210704)	Acanthamoeba castellanii str. Neff	14917002
ACA1_203780	mRNA	ACA1_203780	NW_004457415.1	211164	212833	D	ACA1_203780	join(<211164..211284,211352..211470,211588..211687,211806..211947,212052..212209,212288..212467,212556..212677,212756..>212833)	Acanthamoeba castellanii str. Neff	14917003
ACA1_203890	mRNA	ACA1_203890	NW_004457415.1	213890	214857	D	ACA1_203890	join(<213890..214308,214395..214529,214605..214657,214754..>214857)	Acanthamoeba castellanii str. Neff	14917004
ACA1_203900	mRNA	ACA1_203900	NW_004457415.1	215202	218384	R	ACA1_203900	complement(join(<215202..215285,215422..215517,215607..215673,215759..215846,215935..216245,216381..216518,216594..216677,216796..216911,217033..217156,217236..217323,217416..217491,217566..217721,217877..218065,218159..218286,218360..>218384))	Acanthamoeba castellanii str. Neff	14917005
ACA1_203910	mRNA	ACA1_203910	NW_004457415.1	219282	221467	D	ACA1_203910	join(<219282..219557,219615..219756,219823..219945,220047..220141,220222..220366,220455..220629,220705..221120,221199..>221467)	Acanthamoeba castellanii str. Neff	14917006
ACA1_203920	mRNA	ACA1_203920	NW_004457415.1	221646	225144	R	ACA1_203920	complement(join(<221646..221752,221846..221958,222043..222103,222190..222292,222369..222509,222522..222571,222655..222730,222805..222869,222944..223052,223122..223237,223369..223432,223503..224840,224944..>225144))	Acanthamoeba castellanii str. Neff	14917007
ACA1_203930	mRNA	ACA1_203930	NW_004457415.1	225730	226731	D	ACA1_203930	join(<225730..225847,225916..226075,226194..226281,226356..226452,226592..>226731)	Acanthamoeba castellanii str. Neff	14917008
ACA1_203940	mRNA	ACA1_203940	NW_004457415.1	226889	227805	D	ACA1_203940	join(<226889..226947,227268..227387,227553..227645,227727..>227805)	Acanthamoeba castellanii str. Neff	14917009
ACA1_203950	mRNA	ACA1_203950	NW_004457415.1	228191	230437	D	ACA1_203950	join(<228191..229067,229251..229478,229552..229708,229788..230223,230309..>230437)	Acanthamoeba castellanii str. Neff	14917010
ACA1_203960	mRNA	ACA1_203960	NW_004457415.1	234954	236792	R	ACA1_203960	complement(join(<234954..235257,235342..235453,235549..235644,235717..235855,235964..236088,236252..236446,236570..236729,236775..>236792))	Acanthamoeba castellanii str. Neff	14917011
ACA1_203970	mRNA	ACA1_203970	NW_004457415.1	237147	242356	R	ACA1_203970	complement(join(<237147..237249,237311..237461,237538..237675,237813..238090,238174..238294,238382..238505,238598..238737,238803..238916,238977..239090,239160..239770,239885..240014,240097..240336,240475..240781,241159..241232,241315..241371,241555..241704,241779..241877,241967..242089,242185..>242356))	Acanthamoeba castellanii str. Neff	14916968
ACA1_203980	mRNA	ACA1_203980	NW_004457415.1	242676	243503	D	ACA1_203980	join(<242676..242816,242882..243060,243159..243272,243362..>243503)	Acanthamoeba castellanii str. Neff	14916969
ACA1_203990	mRNA	ACA1_203990	NW_004457415.1	243672	244697	R	ACA1_203990	complement(join(<243672..243791,243883..243947,244111..244146,244225..244284,244356..244388,244495..244572,244664..>244697))	Acanthamoeba castellanii str. Neff	14916970
ACA1_204000	mRNA	ACA1_204000	NW_004457415.1	244941	245721	R	ACA1_204000	complement(join(<244941..245093,245191..245238,245314..245403,245500..>245721))	Acanthamoeba castellanii str. Neff	14916971
ACA1_204010	mRNA	ACA1_204010	NW_004457415.1	246165	246904	R	ACA1_204010	complement(join(<246165..246422,246503..246624,246707..246778,246853..>246904))	Acanthamoeba castellanii str. Neff	14916972
ACA1_204020	mRNA	ACA1_204020	NW_004457415.1	247829	248344	D	ACA1_204020	join(<247829..248082,248194..>248344)	Acanthamoeba castellanii str. Neff	14916973
ACA1_204030	mRNA	ACA1_204030	NW_004457415.1	248876	250984	D	ACA1_204030	join(<248876..248935,249000..249104,249184..249266,249383..249523,249629..249776,249938..250059,250159..250235,250312..250415,250538..250602,250694..250778,250868..>250984)	Acanthamoeba castellanii str. Neff	14916974
ACA1_204040	mRNA	ACA1_204040	NW_004457415.1	251196	253129	D	ACA1_204040	join(<251196..251315,251417..251815,251961..252100,252135..252231,252294..252397,252473..252607,252712..252940,253040..>253129)	Acanthamoeba castellanii str. Neff	14916975
ACA1_204050	mRNA	ACA1_204050	NW_004457415.1	253412	255510	R	ACA1_204050	complement(join(<253412..253466,253537..253685,253847..253989,254087..254243,254348..254765,255032..255086,255177..255210,255358..>255510))	Acanthamoeba castellanii str. Neff	14916976
ACA1_204060	mRNA	ACA1_204060	NW_004457415.1	255796	257057	D	ACA1_204060	join(<255796..256172,256287..256470,256575..>257057)	Acanthamoeba castellanii str. Neff	14916977
ACA1_204070	mRNA	ACA1_204070	NW_004457415.1	257482	259276	R	ACA1_204070	complement(join(<257482..257582,257730..257903,258009..258105,258195..258287,258412..258495,258623..258759,258869..259038,259167..>259276))	Acanthamoeba castellanii str. Neff	14916978
ACA1_204080	mRNA	ACA1_204080	NW_004457415.1	259651	260596	D	ACA1_204080	join(<259651..259690,259780..259860,259937..260008,260125..260246,260336..>260596)	Acanthamoeba castellanii str. Neff	14916979
ACA1_204110	mRNA	ACA1_204110	NW_004457415.1	265245	266672	R	ACA1_204110	complement(<265245..>266672)	Acanthamoeba castellanii str. Neff	14916982
ACA1_204120	mRNA	ACA1_204120	NW_004457415.1	266867	275231	R	ACA1_204120	complement(join(<266867..267026,267122..267288,267387..267575,267648..267776,267894..268313,269079..269150,269227..269326,269422..269576,269676..269914,269994..270324,270422..270544,270604..270792,270884..271206,271306..271687,271798..271971,272052..272108,272204..272294,272368..272455,272585..272935,273018..273133,273232..273334,273405..273542,273635..273758,273870..274029,274130..274264,274467..274509,274613..274735,274814..>275231))	Acanthamoeba castellanii str. Neff	14916983
ACA1_204430	mRNA	ACA1_204430	NW_004457415.1	275640	276207	R	ACA1_204430	complement(join(<275640..275860,275927..276022,276062..276094,276195..>276207))	Acanthamoeba castellanii str. Neff	14916984
ACA1_204440	mRNA	ACA1_204440	NW_004457415.1	277426	281629	D	ACA1_204440	join(<277426..278043,278173..278386,278470..278736,278826..278989,279071..279196,279311..279395,279493..279637,279695..279944,280012..280141,280219..280436,280516..280608,280683..280803,280889..280993,281081..281347,281472..>281629)	Acanthamoeba castellanii str. Neff	14916985
ACA1_204450	mRNA	ACA1_204450	NW_004457415.1	281877	283328	D	ACA1_204450	<281877..>283328	Acanthamoeba castellanii str. Neff	14916986
ACA1_204460	mRNA	ACA1_204460	NW_004457415.1	283420	285463	R	ACA1_204460	complement(join(<283420..283677,283736..283818,283954..284117,284221..284378,284547..284663,284757..284869,284972..285066,285246..>285463))	Acanthamoeba castellanii str. Neff	14916935
ACA1_204470	mRNA	ACA1_204470	NW_004457415.1	285666	288578	R	ACA1_204470	complement(join(<285666..285838,285940..286091,286225..286310,286408..286653,286934..287176,287269..287380,287473..287590,287669..287788,287866..287940,288017..288106,288179..288438,288535..>288578))	Acanthamoeba castellanii str. Neff	14916936
ACA1_204480	mRNA	ACA1_204480	NW_004457415.1	288831	291116	R	ACA1_204480	complement(join(<288831..288931,289013..289127,289222..289327,289387..289459,289626..289723,289888..289964,290031..290126,290250..290363,290475..290575,290690..290758,290888..291004,291092..>291116))	Acanthamoeba castellanii str. Neff	14916937
ACA1_204490	mRNA	ACA1_204490	NW_004457415.1	291255	292491	D	ACA1_204490	join(<291255..291375,291452..291516,291586..291659,291750..291819,291922..291996,292085..292161,292308..>292491)	Acanthamoeba castellanii str. Neff	14916938
ACA1_204500	mRNA	ACA1_204500	NW_004457415.1	292731	299103	D	ACA1_204500	join(<292731..293189,293276..293440,293536..293652,293768..294011,294138..296456,296542..298431,298517..>299103)	Acanthamoeba castellanii str. Neff	14916939
ACA1_204520	mRNA	ACA1_204520	NW_004457415.1	303143	304314	R	ACA1_204520	complement(join(<303143..303203,303288..303501,303605..303775,303887..304037,304156..>304314))	Acanthamoeba castellanii str. Neff	14916941
ACA1_204530	mRNA	ACA1_204530	NW_004457415.1	304668	305482	R	ACA1_204530	complement(join(<304668..304822,304946..305340,305424..>305482))	Acanthamoeba castellanii str. Neff	14916942
ACA1_204540	mRNA	ACA1_204540	NW_004457415.1	306569	307990	D	ACA1_204540	join(<306569..307172,307247..307645,307740..>307990)	Acanthamoeba castellanii str. Neff	14916943
ACA1_204550	mRNA	ACA1_204550	NW_004457415.1	308362	312136	D	ACA1_204550	join(<308362..308741,308888..309032,309107..309211,309327..309493,309723..309822,309925..310011,310262..310377,310492..310564,310628..310753,310884..310961,311065..311163,311226..311379,311464..311682,311763..>312136)	Acanthamoeba castellanii str. Neff	14916944
ACA1_204560	mRNA	ACA1_204560	NW_004457415.1	312474	312896	R	ACA1_204560	complement(join(<312474..312603,312697..>312896))	Acanthamoeba castellanii str. Neff	14916945
ACA1_204570	mRNA	ACA1_204570	NW_004457415.1	313451	314982	R	ACA1_204570	complement(join(<313451..313788,313881..314029,314131..314195,314305..314397,314540..314696,314834..>314982))	Acanthamoeba castellanii str. Neff	14916946
ACA1_204580	mRNA	ACA1_204580	NW_004457415.1	315469	316442	D	ACA1_204580	join(<315469..315525,315637..315900,315981..316208,316269..>316442)	Acanthamoeba castellanii str. Neff	14916947
ACA1_204590	mRNA	ACA1_204590	NW_004457415.1	316538	317579	R	ACA1_204590	complement(join(<316538..316699,316789..316866,316960..317046,317135..317278,317388..>317579))	Acanthamoeba castellanii str. Neff	14916948
ACA1_204610	mRNA	ACA1_204610	NW_004457415.1	318368	321768	D	ACA1_204610	join(<318368..318648,318771..318898,319006..319286,319413..319547,319667..319742,319838..320071,320210..320289,320416..320541,320613..320741,320811..320877,320970..321187,321309..321358,321408..>321768)	Acanthamoeba castellanii str. Neff	14916950
ACA1_204620	mRNA	ACA1_204620	NW_004457415.1	322187	324034	D	ACA1_204620	join(<322187..322549,322760..322970,323049..323173,323246..323309,323364..>324034)	Acanthamoeba castellanii str. Neff	14916951
ACA1_204630	mRNA	ACA1_204630	NW_004457415.1	324017	324834	R	ACA1_204630	complement(join(<324017..324189,324277..324386,324496..324594,324701..>324834))	Acanthamoeba castellanii str. Neff	14916952
ACA1_204740	mRNA	ACA1_204740	NW_004457415.1	326154	326616	D	ACA1_204740	join(<326154..326513,326611..>326616)	Acanthamoeba castellanii str. Neff	14916953
ACA1_204850	mRNA	ACA1_204850	NW_004457415.1	328920	330556	D	ACA1_204850	join(<328920..329009,329093..329192,329264..329301,329404..329493,329570..329642,329742..329808,329892..329999,330093..330192,330282..330339,330414..>330556)	Acanthamoeba castellanii str. Neff	14916954
ACA1_204960	mRNA	ACA1_204960	NW_004457415.1	335071	336978	D	ACA1_204960	join(<335071..335226,335337..335422,335546..335781,335868..335999,336086..336232,336306..336428,336541..336733,336837..>336978)	Acanthamoeba castellanii str. Neff	14916955
ACA1_310730	mRNA	ACA1_310730	NW_004457414.1	65	380	D	ACA1_310730	join(<65..163,234..>380)	Acanthamoeba castellanii str. Neff	14916934
ACA1_310740	mRNA	ACA1_310740	NW_004457414.1	499	4241	R	ACA1_310740	complement(join(<499..603,676..763,927..1005,1075..1209,1272..1633,1697..1890,2008..2065,2244..2700,2788..3520,3708..>4241))	Acanthamoeba castellanii str. Neff	14916923
ACA1_310750	mRNA	ACA1_310750	NW_004457414.1	5189	7081	D	ACA1_310750	join(<5189..5265,5744..5895,5972..6473,6542..6657,6736..6854,6920..>7081)	Acanthamoeba castellanii str. Neff	14916924
ACA1_310760	mRNA	ACA1_310760	NW_004457414.1	7286	7994	D	ACA1_310760	join(<7286..7379,7450..7543,7609..7721,7801..>7994)	Acanthamoeba castellanii str. Neff	14916925
ACA1_310770	mRNA	ACA1_310770	NW_004457414.1	8360	11229	D	ACA1_310770	join(<8360..8501,8572..8672,8729..8815,8929..9027,9133..9351,9465..9563,9662..9777,9875..10045,10123..10282,10353..10536,10620..10912,10984..11100,11185..>11229)	Acanthamoeba castellanii str. Neff	14916926
ACA1_310780	mRNA	ACA1_310780	NW_004457414.1	11708	14767	D	ACA1_310780	join(<11708..11907,11984..12191,12270..12350,12420..12542,12639..13428,13522..13931,13990..14227,14316..>14767)	Acanthamoeba castellanii str. Neff	14916927
ACA1_310790	mRNA	ACA1_310790	NW_004457414.1	14993	15946	D	ACA1_310790	join(<14993..15144,15227..15281,15350..15464,15610..15682,15805..>15946)	Acanthamoeba castellanii str. Neff	14916928
ACA1_310800	mRNA	ACA1_310800	NW_004457414.1	16071	18078	R	ACA1_310800	complement(join(<16071..16326,16415..16530,16606..16694,16760..16843,16963..17127,17239..17627,17704..17810,17911..>18078))	Acanthamoeba castellanii str. Neff	14916929
ACA1_310810	mRNA	ACA1_310810	NW_004457414.1	18335	20100	D	ACA1_310810	join(<18335..19216,19295..19415,19538..19659,19763..19903,19993..>20100)	Acanthamoeba castellanii str. Neff	14916930
ACA1_310820	mRNA	ACA1_310820	NW_004457414.1	20365	21073	R	ACA1_310820	complement(join(<20365..20439,20515..20595,20747..>21073))	Acanthamoeba castellanii str. Neff	14916931
ACA1_310830	mRNA	ACA1_310830	NW_004457414.1	21299	22867	R	ACA1_310830	complement(join(<21299..22426,22554..22700,22784..>22867))	Acanthamoeba castellanii str. Neff	14916932
ACA1_336640	mRNA	ACA1_336640	NW_004457413.1	552	1167	R	ACA1_336640	complement(join(<552..665,755..975,1071..>1167))	Acanthamoeba castellanii str. Neff	14916922
ACA1_336850	mRNA	ACA1_336850	NW_004457413.1	2688	4077	R	ACA1_336850	complement(join(<2688..2736,2844..3098,3183..3268,3344..3589,3706..>4077))	Acanthamoeba castellanii str. Neff	14916920
ACA1_336860	mRNA	ACA1_336860	NW_004457413.1	5330	7610	R	ACA1_336860	complement(join(<5330..5443,5526..5746,5836..5920,5989..6159,6255..6345,6423..6508,6587..6636,6707..6782,6881..6967,7047..7245,7318..7456,7565..>7610))	Acanthamoeba castellanii str. Neff	14916921
ACA1_336870	mRNA	ACA1_336870	NW_004457413.1	7679	9857	R	ACA1_336870	complement(join(<7679..7695,7721..8021,8096..8285,8389..8638,8711..8835,8942..9025,9121..9322,9424..9575,9688..>9857))	Acanthamoeba castellanii str. Neff	14916910
ACA1_336880	mRNA	ACA1_336880	NW_004457413.1	10243	16040	D	ACA1_336880	join(<10243..10471,10542..10585,10673..10750,11077..11740,11815..11996,12066..12126,12246..12479,12568..12653,12719..13150,13228..13398,13464..13547,13659..13757,13834..13906,14032..14114,14198..14527,14624..14734,14823..14943,15017..15138,15228..15535,15597..15709,15769..15881,15966..>16040)	Acanthamoeba castellanii str. Neff	14916911
ACA1_336890	mRNA	ACA1_336890	NW_004457413.1	16584	16868	D	ACA1_336890	<16584..>16868	Acanthamoeba castellanii str. Neff	14916912
ACA1_336900	mRNA	ACA1_336900	NW_004457413.1	17759	30901	D	ACA1_336900	<17759..>30901	Acanthamoeba castellanii str. Neff	14916913
ACA1_336910	mRNA	ACA1_336910	NW_004457413.1	31032	33754	D	ACA1_336910	join(<31032..31202,31400..31515,31690..31798,31902..32009,32114..32206,32328..32451,32743..32891,32915..32952,33060..33332,33421..>33754)	Acanthamoeba castellanii str. Neff	14916914
ACA1_336920	mRNA	ACA1_336920	NW_004457413.1	33884	34991	D	ACA1_336920	join(<33884..34047,34291..34369,34464..34574,34668..34775,34878..>34991)	Acanthamoeba castellanii str. Neff	14916915
ACA1_336930	mRNA	ACA1_336930	NW_004457413.1	35075	36248	D	ACA1_336930	join(<35075..35157,35320..35425,35511..35636,35713..35772,35811..35865,35924..35974,36067..>36248)	Acanthamoeba castellanii str. Neff	14916916
ACA1_336940	mRNA	ACA1_336940	NW_004457413.1	36372	36673	D	ACA1_336940	join(<36372..36375,36420..>36673)	Acanthamoeba castellanii str. Neff	14916917
ACA1_336950	mRNA	ACA1_336950	NW_004457413.1	36940	37893	R	ACA1_336950	complement(join(<36940..37074,37151..37478,37584..37675,37780..>37893))	Acanthamoeba castellanii str. Neff	14916918
ACA1_337060	mRNA	ACA1_337060	NW_004457413.1	41004	41216	R	ACA1_337060	complement(<41004..>41216)	Acanthamoeba castellanii str. Neff	14916919
ACA1_347010	mRNA	ACA1_347010	NW_004457412.1	58	1514	D	ACA1_347010	join(<58..1304,1409..>1514)	Acanthamoeba castellanii str. Neff	14916905
ACA1_347020	mRNA	ACA1_347020	NW_004457412.1	1699	4518	R	ACA1_347020	complement(join(<1699..2012,2095..2263,2365..2459,2477..2647,2719..2837,2923..3029,3121..3371,3442..3656,3742..3857,3940..4094,4169..4256,4333..>4518))	Acanthamoeba castellanii str. Neff	14916904
ACA1_347130	mRNA	ACA1_347130	NW_004457412.1	5977	6790	D	ACA1_347130	join(<5977..5980,6001..6041,6152..>6790)	Acanthamoeba castellanii str. Neff	14916906
ACA1_347140	mRNA	ACA1_347140	NW_004457412.1	9723	10354	D	ACA1_347140	join(<9723..9768,9963..>10354)	Acanthamoeba castellanii str. Neff	14916907
ACA1_347350	mRNA	ACA1_347350	NW_004457412.1	13141	14360	R	ACA1_347350	complement(join(<13141..13158,13253..13317,13373..13433,13524..13653,13733..13858,13936..14042,14118..14287,14312..>14360))	Acanthamoeba castellanii str. Neff	14916908
ACA1_347360	mRNA	ACA1_347360	NW_004457412.1	14435	15866	R	ACA1_347360	complement(join(<14435..14596,14724..14831,14859..14931,15025..15172,15246..15368,15446..15526,15600..15702,15780..>15866))	Acanthamoeba castellanii str. Neff	14916909
ACA1_010390	mRNA	ACA1_010390	NW_004457411.1	694	1162	R	ACA1_010390	complement(join(<694..775,845..965,1090..>1162))	Acanthamoeba castellanii str. Neff	14916903
ACA1_010500	mRNA	ACA1_010500	NW_004457411.1	1813	3367	R	ACA1_010500	complement(join(<1813..1886,2046..2148,2477..3095,3147..>3367))	Acanthamoeba castellanii str. Neff	14916899
ACA1_010610	mRNA	ACA1_010610	NW_004457411.1	5881	8163	R	ACA1_010610	complement(join(<5881..6197,6308..6490,6598..6723,6800..6898,6968..7121,7196..7387,7456..7598,7657..7736,7816..7928,8011..>8163))	Acanthamoeba castellanii str. Neff	14916902
ACA1_010620	mRNA	ACA1_010620	NW_004457411.1	8888	9134	R	ACA1_010620	complement(join(<8888..8899,8931..>9134))	Acanthamoeba castellanii str. Neff	14916901
ACA1_010730	mRNA	ACA1_010730	NW_004457411.1	12197	12891	R	ACA1_010730	complement(join(<12197..12553,12742..>12891))	Acanthamoeba castellanii str. Neff	14916900
ACA1_176510	mRNA	ACA1_176510	NW_004457410.1	23	1142	D	ACA1_176510	join(<23..178,269..389,600..887,994..>1142)	Acanthamoeba castellanii str. Neff	14916810
ACA1_176520	mRNA	ACA1_176520	NW_004457410.1	1184	1429	D	ACA1_176520	<1184..>1429	Acanthamoeba castellanii str. Neff	14916806
ACA1_176630	mRNA	ACA1_176630	NW_004457410.1	7649	8327	D	ACA1_176630	join(<7649..7747,7921..>8327)	Acanthamoeba castellanii str. Neff	14916807
ACA1_176740	mRNA	ACA1_176740	NW_004457410.1	14212	14621	R	ACA1_176740	complement(join(<14212..14294,14325..14426,14519..>14621))	Acanthamoeba castellanii str. Neff	14916808
ACA1_176750	mRNA	ACA1_176750	NW_004457410.1	15030	15262	D	ACA1_176750	join(<15030..15099,15120..>15262)	Acanthamoeba castellanii str. Neff	14916809
ACA1_176860	mRNA	ACA1_176860	NW_004457410.1	15711	17053	D	ACA1_176860	join(<15711..15806,15903..16129,16232..16547,16626..16784,16913..>17053)	Acanthamoeba castellanii str. Neff	14916802
ACA1_176970	mRNA	ACA1_176970	NW_004457410.1	19832	22896	D	ACA1_176970	join(<19832..19973,20058..20139,20236..20575,20688..20834,20955..21065,21771..21919,22018..22216,22298..22363,22463..22638,22746..>22896)	Acanthamoeba castellanii str. Neff	14916803
ACA1_177080	mRNA	ACA1_177080	NW_004457410.1	23751	26879	D	ACA1_177080	join(<23751..23908,23989..24234,24299..24469,24541..24643,24844..24889,24996..25089,25193..25283,25353..25390,25497..25617,25760..25921,26030..26165,26294..26432,26546..>26879)	Acanthamoeba castellanii str. Neff	14916804
ACA1_177090	mRNA	ACA1_177090	NW_004457410.1	26828	28583	R	ACA1_177090	complement(join(<26828..26861,27064..28361,28411..28486,28519..>28583))	Acanthamoeba castellanii str. Neff	14916805
ACA1_177100	mRNA	ACA1_177100	NW_004457410.1	28713	33808	R	ACA1_177100	complement(join(<28713..30474,30509..31020,31133..>33808))	Acanthamoeba castellanii str. Neff	14916811
ACA1_177110	mRNA	ACA1_177110	NW_004457410.1	34338	36341	D	ACA1_177110	<34338..>36341	Acanthamoeba castellanii str. Neff	14916812
ACA1_177120	mRNA	ACA1_177120	NW_004457410.1	36393	36947	R	ACA1_177120	complement(join(<36393..36515,36621..>36947))	Acanthamoeba castellanii str. Neff	14916813
ACA1_177130	mRNA	ACA1_177130	NW_004457410.1	37681	39464	R	ACA1_177130	complement(join(<37681..38132,38358..38464,38541..38660,38736..38847,38944..39032,39126..39210,39290..>39464))	Acanthamoeba castellanii str. Neff	14916814
ACA1_177140	mRNA	ACA1_177140	NW_004457410.1	40498	41142	R	ACA1_177140	complement(<40498..>41142)	Acanthamoeba castellanii str. Neff	14916815
ACA1_177250	mRNA	ACA1_177250	NW_004457410.1	42381	43525	D	ACA1_177250	join(<42381..42567,42648..42736,42830..42865,42992..43106,43191..43312,43382..>43525)	Acanthamoeba castellanii str. Neff	14916816
ACA1_177360	mRNA	ACA1_177360	NW_004457410.1	44245	49616	R	ACA1_177360	complement(join(<44245..44352,44433..44565,44685..44909,45030..45125,45295..45377,45479..45555,45646..45763,45894..45992,46050..46292,46431..46565,46674..46766,46842..46948,47018..47252,47294..47388,47462..47525,47606..47737,47871..48101,48209..48300,48401..48477,48594..48790,48885..49011,49108..49229,49385..49480,49569..>49616))	Acanthamoeba castellanii str. Neff	14916817
ACA1_177370	mRNA	ACA1_177370	NW_004457410.1	50460	51411	R	ACA1_177370	complement(join(<50460..50681,50836..51065,51201..>51411))	Acanthamoeba castellanii str. Neff	14916853
ACA1_177380	mRNA	ACA1_177380	NW_004457410.1	51964	54033	D	ACA1_177380	join(<51964..52059,52259..52348,52494..52637,52733..52814,52949..53061,53251..53443,53537..53633,53701..53776,53866..>54033)	Acanthamoeba castellanii str. Neff	14916854
ACA1_177390	mRNA	ACA1_177390	NW_004457410.1	55978	57987	D	ACA1_177390	join(<55978..56563,56630..>57987)	Acanthamoeba castellanii str. Neff	14916855
ACA1_177400	mRNA	ACA1_177400	NW_004457410.1	58501	59860	R	ACA1_177400	complement(join(<58501..58836,59429..59638,59723..>59860))	Acanthamoeba castellanii str. Neff	14916856
ACA1_177410	mRNA	ACA1_177410	NW_004457410.1	60573	61079	D	ACA1_177410	join(<60573..60940,61025..>61079)	Acanthamoeba castellanii str. Neff	14916857
ACA1_177420	mRNA	ACA1_177420	NW_004457410.1	61644	63089	R	ACA1_177420	complement(<61644..>63089)	Acanthamoeba castellanii str. Neff	14916858
ACA1_177430	mRNA	ACA1_177430	NW_004457410.1	64798	65814	R	ACA1_177430	complement(join(<64798..64814,64978..65088,65233..65334,65425..65542,65668..>65814))	Acanthamoeba castellanii str. Neff	14916859
ACA1_177440	mRNA	ACA1_177440	NW_004457410.1	66102	68549	D	ACA1_177440	join(<66102..66143,66221..66320,66400..66535,66628..66718,66793..66879,66943..67074,67181..67498,67604..67684,67756..68037,68182..68250,68388..>68549)	Acanthamoeba castellanii str. Neff	14916860
ACA1_177450	mRNA	ACA1_177450	NW_004457410.1	68652	68984	R	ACA1_177450	complement(join(<68652..68870,68898..>68984))	Acanthamoeba castellanii str. Neff	14916861
ACA1_177460	mRNA	ACA1_177460	NW_004457410.1	69692	71972	D	ACA1_177460	join(<69692..70091,70166..70250,70331..70417,70499..70649,70710..70829,71145..71367,71455..>71972)	Acanthamoeba castellanii str. Neff	14916862
ACA1_177470	mRNA	ACA1_177470	NW_004457410.1	72744	74034	D	ACA1_177470	join(<72744..72800,72908..73022,73133..73240,73344..73415,73483..73562,73691..73730,73799..73867,73940..>74034)	Acanthamoeba castellanii str. Neff	14916863
ACA1_177480	mRNA	ACA1_177480	NW_004457410.1	74627	75109	D	ACA1_177480	<74627..>75109	Acanthamoeba castellanii str. Neff	14916834
ACA1_177490	mRNA	ACA1_177490	NW_004457410.1	75471	82617	D	ACA1_177490	join(<75471..75484,75695..75742,75853..75976,76098..76167,76274..76392,76516..76590,76680..76820,76906..77020,77111..77201,77303..77483,77589..77669,77817..77900,78020..78186,78288..78373,78520..78654,78807..79784,79953..80044,80148..80225,80327..80368,80449..80599,80681..80739,80847..80960,81062..81148,81267..81536,81652..81789,81902..82132,82214..82390,82534..>82617)	Acanthamoeba castellanii str. Neff	14916835
ACA1_177500	mRNA	ACA1_177500	NW_004457410.1	82994	86921	D	ACA1_177500	join(<82994..83279,83361..83428,83503..83560,83636..83728,83796..84154,84274..84357,84479..85762,85871..86179,86275..86695,86800..>86921)	Acanthamoeba castellanii str. Neff	14916836
ACA1_177510	mRNA	ACA1_177510	NW_004457410.1	88193	88732	D	ACA1_177510	<88193..>88732	Acanthamoeba castellanii str. Neff	14916837
ACA1_177530	mRNA	ACA1_177530	NW_004457410.1	93499	96186	D	ACA1_177530	join(<93499..93949,94064..94186,94313..94476,94556..94639,94715..94786,94880..94978,95056..95214,95329..95439,95537..95637,95732..95835,95959..95995,96063..>96186)	Acanthamoeba castellanii str. Neff	14916839
ACA1_177540	mRNA	ACA1_177540	NW_004457410.1	96375	96782	R	ACA1_177540	complement(<96375..>96782)	Acanthamoeba castellanii str. Neff	14916840
ACA1_177550	mRNA	ACA1_177550	NW_004457410.1	97498	101073	R	ACA1_177550	complement(join(<97498..97810,97887..97999,98076..98248,98342..98513,98597..98683,98773..98957,99052..99204,99291..99595,99674..99863,99959..100101,100181..100310,100398..100475,100494..100507,100644..100808,100884..100956,100979..101013,101039..>101073))	Acanthamoeba castellanii str. Neff	14916841
ACA1_177560	mRNA	ACA1_177560	NW_004457410.1	101520	102790	R	ACA1_177560	complement(join(<101520..101623,101707..101866,101950..102251,102364..102544,102567..102648,102741..>102790))	Acanthamoeba castellanii str. Neff	14916842
ACA1_177570	mRNA	ACA1_177570	NW_004457410.1	102999	104421	D	ACA1_177570	join(<102999..103161,103253..103333,103435..103493,103592..103747,103817..103907,103971..104051,104111..104219,104298..>104421)	Acanthamoeba castellanii str. Neff	14916843
ACA1_177580	mRNA	ACA1_177580	NW_004457410.1	105147	105619	D	ACA1_177580	join(<105147..105249,105312..105430,105491..>105619)	Acanthamoeba castellanii str. Neff	14916844
ACA1_177590	mRNA	ACA1_177590	NW_004457410.1	105746	106879	D	ACA1_177590	join(<105746..105834,105905..106376,106459..106598,106681..106774,106793..>106879)	Acanthamoeba castellanii str. Neff	14916818
ACA1_177700	mRNA	ACA1_177700	NW_004457410.1	108461	110127	D	ACA1_177700	join(<108461..108560,108653..108771,108855..108923,109001..109114,109196..109294,109374..109448,109520..109584,109650..109764,109897..>110127)	Acanthamoeba castellanii str. Neff	14916819
ACA1_177710	mRNA	ACA1_177710	NW_004457410.1	110291	112614	R	ACA1_177710	complement(join(<110291..110480,110584..110687,110767..110834,110937..111058,111176..111311,111412..111506,111636..111739,111875..111973,112081..112212,112314..112323,112418..>112614))	Acanthamoeba castellanii str. Neff	14916820
ACA1_177720	mRNA	ACA1_177720	NW_004457410.1	113044	114233	R	ACA1_177720	complement(join(<113044..113679,113789..113847,113971..114016,114084..>114233))	Acanthamoeba castellanii str. Neff	14916821
ACA1_177730	mRNA	ACA1_177730	NW_004457410.1	114452	118226	R	ACA1_177730	complement(join(<114452..114595,114750..114779,114878..114974,115106..115224,115325..115445,115584..115654,115766..115831,115910..116284,116374..116586,116729..116830,116919..117077,117150..117233,117603..117699,117775..117871,118220..>118226))	Acanthamoeba castellanii str. Neff	14916822
ACA1_177740	mRNA	ACA1_177740	NW_004457410.1	118553	123506	D	ACA1_177740	join(<118553..118630,118763..118893,119009..119053,119142..119358,119490..119548,119675..119703,119819..119872,120052..120131,120231..120310,120427..120723,120805..120879,121101..121187,121333..121415,121517..121579,121655..121836,121966..122527,122644..>123506)	Acanthamoeba castellanii str. Neff	14916823
ACA1_177750	mRNA	ACA1_177750	NW_004457410.1	123803	128721	D	ACA1_177750	join(<123803..124108,124409..124560,124782..124942,125074..125189,125342..125506,125599..125842,125942..126020,126120..126219,126348..126419,126542..126827,126945..127162,127231..127593,127801..>128721)	Acanthamoeba castellanii str. Neff	14916824
ACA1_177860	mRNA	ACA1_177860	NW_004457410.1	128839	131947	R	ACA1_177860	complement(join(<128839..129018,129160..129567,129656..129739,129874..129942,130049..130129,130247..130449,130628..130719,130856..130957,131082..131223,131340..131429,131527..131586,131669..131792,131912..>131947))	Acanthamoeba castellanii str. Neff	14916825
ACA1_177870	mRNA	ACA1_177870	NW_004457410.1	132405	134939	R	ACA1_177870	complement(join(<132405..132487,132592..132868,133049..133132,133230..133349,133485..133603,133729..133857,133946..134182,134255..134348,134511..134686,134810..>134939))	Acanthamoeba castellanii str. Neff	14916826
ACA1_177880	mRNA	ACA1_177880	NW_004457410.1	135422	138980	D	ACA1_177880	join(<135422..135478,135595..135802,135926..135965,136089..136182,136307..136453,136578..136631,136719..136838,136951..137407,137506..>138980)	Acanthamoeba castellanii str. Neff	14916827
ACA1_177890	mRNA	ACA1_177890	NW_004457410.1	139049	142174	R	ACA1_177890	complement(join(<139049..139202,139393..139571,139661..139792,139913..140008,140126..140183,140288..140430,140447..140454,140680..140908,141043..141775,141882..>142174))	Acanthamoeba castellanii str. Neff	14916828
ACA1_177900	mRNA	ACA1_177900	NW_004457410.1	142311	143779	D	ACA1_177900	join(<142311..142326,142470..142520,142632..142710,142888..142932,143058..143211,143360..143505,143608..>143779)	Acanthamoeba castellanii str. Neff	14916829
ACA1_177910	mRNA	ACA1_177910	NW_004457410.1	143900	148983	R	ACA1_177910	complement(join(<143900..144463,144539..144665,144743..144890,145036..145121,145228..145314,145612..145713,145839..145913,146020..146839,146893..147802,147898..148253,148364..148561,148656..148775,148890..>148983))	Acanthamoeba castellanii str. Neff	14916830
ACA1_177920	mRNA	ACA1_177920	NW_004457410.1	149111	152148	R	ACA1_177920	complement(join(<149111..149376,149467..149591,149748..149836,149921..150226,150297..150367,150458..150607,150681..150746,150831..150971,151061..151132,151217..151351,151527..151687,151859..>152148))	Acanthamoeba castellanii str. Neff	14916831
ACA1_177930	mRNA	ACA1_177930	NW_004457410.1	152745	153082	D	ACA1_177930	join(<152745..152842,152971..>153082)	Acanthamoeba castellanii str. Neff	14916832
ACA1_177940	mRNA	ACA1_177940	NW_004457410.1	155914	156606	D	ACA1_177940	join(<155914..156089,156123..>156606)	Acanthamoeba castellanii str. Neff	14916833
ACA1_177950	mRNA	ACA1_177950	NW_004457410.1	157209	157595	R	ACA1_177950	complement(join(<157209..157216,157355..>157595))	Acanthamoeba castellanii str. Neff	14916883
ACA1_178060	mRNA	ACA1_178060	NW_004457410.1	159294	163615	R	ACA1_178060	complement(join(<159294..159444,159533..159586,159696..159789,159894..159942,160033..160161,160259..160344,160395..160580,160668..160784,160867..161006,161081..161160,161458..161627,161693..161798,161861..161956,162038..162241,162331..162467,162556..162623,162783..162886,162966..163032,163155..163216,163295..>163615))	Acanthamoeba castellanii str. Neff	14916884
ACA1_178070	mRNA	ACA1_178070	NW_004457410.1	163755	173775	D	ACA1_178070	join(<163755..163982,164189..164405,164497..164675,164850..164881,165008..165152,165235..165402,165551..165625,165727..166020,166205..166366,166477..166677,166787..166912,167007..167133,167291..167447,167567..167672,167802..167905,168080..168410,168608..168754,168974..169066,169211..169471,169570..169650,169753..169965,170137..170259,170377..170434,170596..170783,170924..171253,171406..171535,171689..171876,171927..172031,172147..172287,172440..172620,172722..172870,173060..173195,173403..173557,173653..>173775)	Acanthamoeba castellanii str. Neff	14916885
ACA1_178080	mRNA	ACA1_178080	NW_004457410.1	174019	174643	R	ACA1_178080	complement(join(<174019..174176,174285..174490,174528..>174643))	Acanthamoeba castellanii str. Neff	14916886
ACA1_178090	mRNA	ACA1_178090	NW_004457410.1	175111	176171	D	ACA1_178090	join(<175111..175527,175737..175925,176157..>176171)	Acanthamoeba castellanii str. Neff	14916887
ACA1_178200	mRNA	ACA1_178200	NW_004457410.1	176994	179491	D	ACA1_178200	join(<176994..177034,177570..177680,178012..178138,178232..178324,178507..178587,178806..178926,179040..179106,179227..179356,179441..>179491)	Acanthamoeba castellanii str. Neff	14916888
ACA1_178210	mRNA	ACA1_178210	NW_004457410.1	179777	180787	R	ACA1_178210	complement(join(<179777..180321,180598..>180787))	Acanthamoeba castellanii str. Neff	14916889
ACA1_178220	mRNA	ACA1_178220	NW_004457410.1	181019	181922	D	ACA1_178220	join(<181019..181087,181208..181323,181517..181631,181755..>181922)	Acanthamoeba castellanii str. Neff	14916890
ACA1_178230	mRNA	ACA1_178230	NW_004457410.1	182135	185466	D	ACA1_178230	join(<182135..182167,182482..182522,182743..182851,182942..182962,183281..183408,183564..183614,183733..183875,183990..184164,184366..184460,184587..184735,184872..185031,185124..185278,185344..>185466)	Acanthamoeba castellanii str. Neff	14916891
ACA1_178240	mRNA	ACA1_178240	NW_004457410.1	185592	188653	R	ACA1_178240	complement(join(<185592..185734,185823..185997,186099..186241,186281..186458,186620..186730,186904..187012,187118..187228,187275..187394,187572..187734,187892..187937,188176..188291,188418..188493,188615..>188653))	Acanthamoeba castellanii str. Neff	14916892
ACA1_178250	mRNA	ACA1_178250	NW_004457410.1	188864	190844	R	ACA1_178250	complement(join(<188864..189046,189169..189291,189535..189597,189839..190048,190154..190407,190568..>190844))	Acanthamoeba castellanii str. Neff	14916893
ACA1_178260	mRNA	ACA1_178260	NW_004457410.1	191637	194142	D	ACA1_178260	join(<191637..191720,191776..191891,191927..191963,192133..192177,192343..192468,192564..192782,192952..193114,193266..193291,193412..193606,193697..193859,193946..>194142)	Acanthamoeba castellanii str. Neff	14916894
ACA1_178270	mRNA	ACA1_178270	NW_004457410.1	194375	195165	D	ACA1_178270	join(<194375..194403,194646..194715,194800..>195165)	Acanthamoeba castellanii str. Neff	14916895
ACA1_178280	mRNA	ACA1_178280	NW_004457410.1	198401	202749	R	ACA1_178280	complement(join(<198401..198406,198545..198600,198684..198782,198945..199335,199524..199645,199753..199852,200147..200211,200320..200416,200649..200792,200814..200897,200976..201100,201484..201592,201704..201859,202152..202466,202597..>202749))	Acanthamoeba castellanii str. Neff	14916896
ACA1_178290	mRNA	ACA1_178290	NW_004457410.1	203314	204642	R	ACA1_178290	complement(<203314..>204642)	Acanthamoeba castellanii str. Neff	14916897
ACA1_178300	mRNA	ACA1_178300	NW_004457410.1	204864	209139	R	ACA1_178300	complement(join(<204864..205106,205196..205292,205413..205506,205588..205649,205754..205865,206030..206153,206283..206356,206494..206608,206754..206838,206930..206995,207091..207160,207291..207405,207608..207707,207791..207915,208079..208154,208358..208489,208659..208911,209070..>209139))	Acanthamoeba castellanii str. Neff	14916898
ACA1_178310	mRNA	ACA1_178310	NW_004457410.1	209430	213130	R	ACA1_178310	complement(join(<209430..209503,209627..209777,209892..210027,210214..210274,210367..210502,210633..210737,210866..211235,211326..211462,211692..211837,211974..212006,212108..212246,212441..212562,212673..212799,212924..>213130))	Acanthamoeba castellanii str. Neff	14916787
ACA1_178320	mRNA	ACA1_178320	NW_004457410.1	213411	214421	D	ACA1_178320	join(<213411..213547,213675..213857,213976..214051,214177..214232,214319..>214421)	Acanthamoeba castellanii str. Neff	14916788
ACA1_178330	mRNA	ACA1_178330	NW_004457410.1	214544	216033	R	ACA1_178330	complement(join(<214544..214741,214894..215025,215154..215357,215479..>216033))	Acanthamoeba castellanii str. Neff	14916789
ACA1_178340	mRNA	ACA1_178340	NW_004457410.1	216513	224199	D	ACA1_178340	join(<216513..218036,218166..218283,218625..218772,218944..219018,219060..220545,220563..220734,220905..220927,221064..221176,221332..221427,221531..221588,221616..221714,221796..221856,221969..222102,222220..222348,222491..222598,222755..222805,222968..223060,223234..223329,223463..223553,223680..223856,223943..224007,224098..>224199)	Acanthamoeba castellanii str. Neff	14916790
ACA1_178350	mRNA	ACA1_178350	NW_004457410.1	224818	226328	R	ACA1_178350	complement(join(<224818..225053,225138..225311,225401..225501,226015..226126,226244..>226328))	Acanthamoeba castellanii str. Neff	14916791
ACA1_178460	mRNA	ACA1_178460	NW_004457410.1	228128	230689	R	ACA1_178460	complement(join(<228128..228544,228652..228702,228880..228984,229155..229295,229469..229539,229662..229723,229906..229952,230069..230195,230295..>230689))	Acanthamoeba castellanii str. Neff	14916792
ACA1_178470	mRNA	ACA1_178470	NW_004457410.1	230782	236246	R	ACA1_178470	complement(join(<230782..231127,231218..231375,231542..231671,231803..231948,232054..232334,232432..232588,232714..232877,233040..233097,233171..233233,233342..233515,233648..233785,233931..233998,234111..234315,234437..234518,234688..234833,234924..235092,235237..235301,235408..235589,235655..235865,235998..>236246))	Acanthamoeba castellanii str. Neff	14916793
ACA1_178480	mRNA	ACA1_178480	NW_004457410.1	236412	240593	D	ACA1_178480	join(<236412..236472,236733..237126,237196..237472,237547..237596,237692..237821,237889..238036,238131..238195,238256..238396,238474..238595,238676..238775,238880..239043,239132..239204,239286..239550,239658..239816,239892..240161,240270..240363,240449..>240593)	Acanthamoeba castellanii str. Neff	14916794
ACA1_178490	mRNA	ACA1_178490	NW_004457410.1	241169	244309	D	ACA1_178490	join(<241169..241953,242123..242279,242437..242464,242597..242920,243015..243219,243310..243471,243589..243721,243862..244056,244178..>244309)	Acanthamoeba castellanii str. Neff	14916795
ACA1_178500	mRNA	ACA1_178500	NW_004457410.1	244730	249896	R	ACA1_178500	complement(join(<244730..244968,245088..245231,245316..245428,245517..245631,245748..246477,246554..246720,246812..246962,247075..247183,247280..247448,247594..247939,248034..248153,248267..248819,248912..249036,249141..>249896))	Acanthamoeba castellanii str. Neff	14916796
ACA1_178510	mRNA	ACA1_178510	NW_004457410.1	250013	251675	R	ACA1_178510	complement(join(<250013..250264,250405..250542,250688..250760,250904..251009,251116..251300,251383..>251675))	Acanthamoeba castellanii str. Neff	14916797
ACA1_178520	mRNA	ACA1_178520	NW_004457410.1	252125	253681	D	ACA1_178520	join(<252125..252218,252254..252308,252455..252543,252637..252769,252889..253002,253112..253329,253404..>253681)	Acanthamoeba castellanii str. Neff	14916798
ACA1_178530	mRNA	ACA1_178530	NW_004457410.1	253822	254813	R	ACA1_178530	complement(join(<253822..253919,253994..254103,254235..254362,254497..254623,254734..>254813))	Acanthamoeba castellanii str. Neff	14916799
ACA1_178540	mRNA	ACA1_178540	NW_004457410.1	254978	257918	R	ACA1_178540	complement(join(<254978..255089,255168..255287,255472..255602,255682..255858,255943..256082,256170..256339,256550..256620,256756..256853,256938..257568,257619..>257918))	Acanthamoeba castellanii str. Neff	14916800
ACA1_178550	mRNA	ACA1_178550	NW_004457410.1	258207	259076	D	ACA1_178550	join(<258207..258476,258564..258714,258838..>259076)	Acanthamoeba castellanii str. Neff	14916801
ACA1_178560	mRNA	ACA1_178560	NW_004457410.1	259183	259583	D	ACA1_178560	join(<259183..259426,259516..>259583)	Acanthamoeba castellanii str. Neff	14916864
ACA1_178570	mRNA	ACA1_178570	NW_004457410.1	259634	260347	R	ACA1_178570	complement(<259634..>260347)	Acanthamoeba castellanii str. Neff	14916865
ACA1_178580	mRNA	ACA1_178580	NW_004457410.1	260536	262553	R	ACA1_178580	complement(join(<260536..260746,260837..260982,261083..261190,261261..261343,261646..261782,261905..261994,262058..262261,262375..>262553))	Acanthamoeba castellanii str. Neff	14916866
ACA1_178590	mRNA	ACA1_178590	NW_004457410.1	262804	263644	D	ACA1_178590	join(<262804..263142,263318..>263644)	Acanthamoeba castellanii str. Neff	14916867
ACA1_178700	mRNA	ACA1_178700	NW_004457410.1	263873	266796	R	ACA1_178700	complement(join(<263873..264092,264180..264321,264443..264600,264717..264754,264806..264856,264941..265056,265193..265285,265399..265507,265578..265780,265877..265919,265934..265983,266081..266380,266484..266601,266695..>266796))	Acanthamoeba castellanii str. Neff	14916868
ACA1_178710	mRNA	ACA1_178710	NW_004457410.1	267025	268075	R	ACA1_178710	complement(join(<267025..267088,267169..267275,267362..267426,267492..267576,267652..267713,267816..267900,267983..>268075))	Acanthamoeba castellanii str. Neff	14916869
ACA1_178720	mRNA	ACA1_178720	NW_004457410.1	268370	270153	D	ACA1_178720	join(<268370..268723,268825..268911,269025..269138,269246..269368,269397..269441,269459..269676,269754..269837,269994..>270153)	Acanthamoeba castellanii str. Neff	14916870
ACA1_178730	mRNA	ACA1_178730	NW_004457410.1	270244	272314	D	ACA1_178730	join(<270244..270491,270587..270795,270916..271136,271234..271294,271324..271412,271464..271529,271607..271892,272022..>272314)	Acanthamoeba castellanii str. Neff	14916871
ACA1_178740	mRNA	ACA1_178740	NW_004457410.1	273008	275169	R	ACA1_178740	complement(join(<273008..273256,273379..274513,274803..274943,275033..>275169))	Acanthamoeba castellanii str. Neff	14916872
ACA1_178750	mRNA	ACA1_178750	NW_004457410.1	275471	277118	R	ACA1_178750	complement(join(<275471..275863,275954..276073,276161..276241,276322..276669,276732..>277118))	Acanthamoeba castellanii str. Neff	14916873
ACA1_178760	mRNA	ACA1_178760	NW_004457410.1	277683	282116	D	ACA1_178760	join(<277683..277828,277946..278095,278202..278321,278425..278612,278707..278848,278960..279149,279280..279342,279456..279648,279730..279857,279973..280158,280267..280461,280548..280819,280947..281076,281413..281580,281655..281780,281853..>282116)	Acanthamoeba castellanii str. Neff	14916874
ACA1_178890	mRNA	ACA1_178890	NW_004457410.1	288115	288785	D	ACA1_178890	join(<288115..288327,288416..288526,288678..>288785)	Acanthamoeba castellanii str. Neff	14916877
ACA1_179000	mRNA	ACA1_179000	NW_004457410.1	289470	290059	D	ACA1_179000	join(<289470..289616,289731..289921,289969..>290059)	Acanthamoeba castellanii str. Neff	14916878
ACA1_179110	mRNA	ACA1_179110	NW_004457410.1	294308	297677	D	ACA1_179110	join(<294308..294383,294504..294685,294769..295171,295265..295323,295457..295606,295689..295788,295814..296097,296202..296285,296393..296458,296533..296631,296721..296818,296888..297100,297204..297346,297442..>297677)	Acanthamoeba castellanii str. Neff	14916879
ACA1_179120	mRNA	ACA1_179120	NW_004457410.1	297921	299913	D	ACA1_179120	join(<297921..298058,298251..298340,298675..298755,298833..298931,299295..299375,299482..299580,299866..>299913)	Acanthamoeba castellanii str. Neff	14916880
ACA1_179130	mRNA	ACA1_179130	NW_004457410.1	300428	308188	D	ACA1_179130	join(<300428..300547,300648..300812,300901..300990,301093..301212,301314..301432,301574..301712,301826..301938,302078..302326,302522..302699,302778..302918,303039..303116,303298..303442,303547..303695,303805..304006,304066..304298,304412..304572,304658..304944,305016..305117,305231..305298,305405..305522,305600..305773,305884..306425,306537..306584,306662..306790,306943..307041,307243..307365,307578..307685,307778..307939,308027..>308188)	Acanthamoeba castellanii str. Neff	14916881
ACA1_179140	mRNA	ACA1_179140	NW_004457410.1	308314	308885	D	ACA1_179140	join(<308314..308510,308616..308691,308736..>308885)	Acanthamoeba castellanii str. Neff	14916882
ACA1_179160	mRNA	ACA1_179160	NW_004457410.1	311979	313591	D	ACA1_179160	join(<311979..312107,312218..312712,312835..312928,313035..313119,313284..313382,313519..>313591)	Acanthamoeba castellanii str. Neff	14916846
ACA1_179170	mRNA	ACA1_179170	NW_004457410.1	313757	314532	R	ACA1_179170	complement(join(<313757..313922,314004..314227,314301..314434,314505..>314532))	Acanthamoeba castellanii str. Neff	14916847
ACA1_179180	mRNA	ACA1_179180	NW_004457410.1	317116	317396	D	ACA1_179180	join(<317116..317327,317357..>317396)	Acanthamoeba castellanii str. Neff	14916848
ACA1_179190	mRNA	ACA1_179190	NW_004457410.1	318495	319443	D	ACA1_179190	join(<318495..318934,319065..319213,319286..>319443)	Acanthamoeba castellanii str. Neff	14916849
ACA1_179200	mRNA	ACA1_179200	NW_004457410.1	319764	320264	D	ACA1_179200	join(<319764..319932,320029..>320264)	Acanthamoeba castellanii str. Neff	14916850
ACA1_179210	mRNA	ACA1_179210	NW_004457410.1	320806	326727	D	ACA1_179210	join(<320806..320913,320994..321320,321414..321655,321743..322112,322194..322278,322373..322485,322572..322773,322869..322988,323059..323342,323421..323588,323663..323974,324074..324466,324561..324818,324952..325325,325458..325848,325939..326276,326361..>326727)	Acanthamoeba castellanii str. Neff	14916851
ACA1_303620	mRNA	ACA1_303620	NW_004457409.1	10061	11090	D	ACA1_303620	join(<10061..11028,11048..>11090)	Acanthamoeba castellanii str. Neff	14916786
ACA1_025520	mRNA	ACA1_025520	NW_004457408.1	21	4495	R	ACA1_025520	complement(join(<21..412,486..719,806..1149,1258..1618,1717..1986,2063..2547,2624..3278,3381..3545,3629..3788,3913..4005,4080..4171,4363..>4495))	Acanthamoeba castellanii str. Neff	14916784
ACA1_025530	mRNA	ACA1_025530	NW_004457408.1	4961	6801	D	ACA1_025530	join(<4961..5081,5167..5579,5675..6077,6155..6348,6425..6553,6628..>6801)	Acanthamoeba castellanii str. Neff	14916785
ACA1_025540	mRNA	ACA1_025540	NW_004457408.1	7038	9270	D	ACA1_025540	join(<7038..7108,7196..7249,7327..7399,7496..7569,7647..7789,7897..8002,8084..8199,8288..8451,8536..8637,8735..8814,8957..9115,9192..>9270)	Acanthamoeba castellanii str. Neff	14916783
ACA1_025550	mRNA	ACA1_025550	NW_004457408.1	9350	10833	D	ACA1_025550	join(<9350..9397,9491..9592,9642..9844,9941..10003,10145..10305,10372..10566,10667..>10833)	Acanthamoeba castellanii str. Neff	14916780
ACA1_025560	mRNA	ACA1_025560	NW_004457408.1	10990	15243	R	ACA1_025560	complement(join(<10990..11091,11218..11711,11785..11956,12112..12327,12412..12471,12553..12915,13189..13305,13404..13489,13765..13829,13905..14048,14123..14272,14353..14459,14582..14754,14847..15062,15144..>15243))	Acanthamoeba castellanii str. Neff	14916781
ACA1_025570	mRNA	ACA1_025570	NW_004457408.1	15937	17706	D	ACA1_025570	join(<15937..16070,16150..16251,16337..16485,16547..16671,16768..16957,17039..17578,17666..>17706)	Acanthamoeba castellanii str. Neff	14916782
ACA1_331090	mRNA	ACA1_331090	NW_004457407.1	1570	2012	R	ACA1_331090	complement(join(<1570..1638,1718..1819,1902..>2012))	Acanthamoeba castellanii str. Neff	14916770
ACA1_331100	mRNA	ACA1_331100	NW_004457407.1	2094	2339	D	ACA1_331100	<2094..>2339	Acanthamoeba castellanii str. Neff	14916771
ACA1_331110	mRNA	ACA1_331110	NW_004457407.1	2497	3538	R	ACA1_331110	complement(join(<2497..2741,2821..2887,2980..3060,3141..3232,3337..3387,3475..>3538))	Acanthamoeba castellanii str. Neff	14916776
ACA1_331120	mRNA	ACA1_331120	NW_004457407.1	4664	6321	D	ACA1_331120	join(<4664..4691,4909..5009,5131..5295,5377..5524,5604..5729,5798..5917,6042..6134,6194..>6321)	Acanthamoeba castellanii str. Neff	14916773
ACA1_331230	mRNA	ACA1_331230	NW_004457407.1	6629	9111	D	ACA1_331230	join(<6629..6736,6803..7077,7147..7336,7423..7497,7577..7626,7703..7784,7895..8005,8083..8185,8326..8412,8487..8536,8621..8717,8783..8851,8963..>9111)	Acanthamoeba castellanii str. Neff	14916779
ACA1_331240	mRNA	ACA1_331240	NW_004457407.1	9196	10338	R	ACA1_331240	complement(join(<9196..9460,9533..9726,9824..10130,10196..>10338))	Acanthamoeba castellanii str. Neff	14916775
ACA1_331250	mRNA	ACA1_331250	NW_004457407.1	10616	11467	D	ACA1_331250	join(<10616..10687,10777..10856,11120..11225,11318..>11467)	Acanthamoeba castellanii str. Neff	14916774
ACA1_331360	mRNA	ACA1_331360	NW_004457407.1	14806	16458	D	ACA1_331360	join(<14806..14871,14963..15109,15184..15235,15383..15754,15887..15994,16129..16256,16378..>16458)	Acanthamoeba castellanii str. Neff	14916777
ACA1_331370	mRNA	ACA1_331370	NW_004457407.1	16555	19653	R	ACA1_331370	complement(join(<16555..16709,16783..16930,17012..17092,17181..17386,17517..17583,17727..17945,18061..18179,18300..18418,18508..18605,18689..18788,18883..19281,19349..19464,19531..>19653))	Acanthamoeba castellanii str. Neff	14916778
ACA1_331480	mRNA	ACA1_331480	NW_004457407.1	23839	24615	R	ACA1_331480	complement(join(<23839..24194,24268..24442,24517..>24615))	Acanthamoeba castellanii str. Neff	14916772
ACA1_221470	mRNA	ACA1_221470	NW_004457406.1	261	768	D	ACA1_221470	join(<261..587,613..>768)	Acanthamoeba castellanii str. Neff	14916697
ACA1_221480	mRNA	ACA1_221480	NW_004457406.1	1786	2532	R	ACA1_221480	complement(<1786..>2532)	Acanthamoeba castellanii str. Neff	14916692
ACA1_221590	mRNA	ACA1_221590	NW_004457406.1	3505	3777	R	ACA1_221590	complement(<3505..>3777)	Acanthamoeba castellanii str. Neff	14916721
ACA1_221600	mRNA	ACA1_221600	NW_004457406.1	3868	4548	D	ACA1_221600	<3868..>4548	Acanthamoeba castellanii str. Neff	14916722
ACA1_221610	mRNA	ACA1_221610	NW_004457406.1	4992	5712	R	ACA1_221610	complement(join(<4992..5104,5200..5344,5428..5513,5604..>5712))	Acanthamoeba castellanii str. Neff	14916723
ACA1_221620	mRNA	ACA1_221620	NW_004457406.1	5796	7079	R	ACA1_221620	complement(join(<5796..5851,5952..6022,6137..6240,6380..6445,6540..6646,6738..6813,6912..>7079))	Acanthamoeba castellanii str. Neff	14916717
ACA1_221630	mRNA	ACA1_221630	NW_004457406.1	8994	9939	R	ACA1_221630	complement(join(<8994..9597,9659..9820,9875..>9939))	Acanthamoeba castellanii str. Neff	14916718
ACA1_221640	mRNA	ACA1_221640	NW_004457406.1	12371	12622	D	ACA1_221640	join(<12371..12592,12614..>12622)	Acanthamoeba castellanii str. Neff	14916719
ACA1_221650	mRNA	ACA1_221650	NW_004457406.1	13242	15386	D	ACA1_221650	join(<13242..13261,13273..13550,13640..13821,13940..13993,14295..14780,14843..15096,15335..>15386)	Acanthamoeba castellanii str. Neff	14916720
ACA1_221760	mRNA	ACA1_221760	NW_004457406.1	16474	16978	D	ACA1_221760	join(<16474..16904,16954..>16978)	Acanthamoeba castellanii str. Neff	14916752
ACA1_221770	mRNA	ACA1_221770	NW_004457406.1	16909	17455	R	ACA1_221770	complement(join(<16909..16957,17197..17270,17357..>17455))	Acanthamoeba castellanii str. Neff	14916753
ACA1_221780	mRNA	ACA1_221780	NW_004457406.1	18290	20724	D	ACA1_221780	join(<18290..18805,19083..19943,20131..20256,20407..>20724)	Acanthamoeba castellanii str. Neff	14916754
ACA1_222090	mRNA	ACA1_222090	NW_004457406.1	24323	25279	R	ACA1_222090	complement(join(<24323..25082,25215..>25279))	Acanthamoeba castellanii str. Neff	14916755
ACA1_222100	mRNA	ACA1_222100	NW_004457406.1	27842	28583	R	ACA1_222100	complement(join(<27842..27894,27915..28472,28574..>28583))	Acanthamoeba castellanii str. Neff	14916756
ACA1_222310	mRNA	ACA1_222310	NW_004457406.1	31415	31708	R	ACA1_222310	complement(join(<31415..31490,31584..>31708))	Acanthamoeba castellanii str. Neff	14916757
ACA1_222320	mRNA	ACA1_222320	NW_004457406.1	32052	34506	D	ACA1_222320	join(<32052..32356,32449..32506,32641..32721,32876..32974,33050..33153,33260..33354,33460..33568,33681..33771,33859..33951,34074..34174,34293..>34506)	Acanthamoeba castellanii str. Neff	14916758
ACA1_222330	mRNA	ACA1_222330	NW_004457406.1	35182	39286	D	ACA1_222330	join(<35182..35239,35343..35442,35613..35673,35791..35928,36022..36330,36402..36715,36805..37402,37475..37618,37777..37915,38000..38147,38390..38900,38958..39074,39161..>39286)	Acanthamoeba castellanii str. Neff	14916759
ACA1_222540	mRNA	ACA1_222540	NW_004457406.1	42066	43584	D	ACA1_222540	join(<42066..42212,42304..42455,42524..42647,42880..43021,43095..43258,43391..>43584)	Acanthamoeba castellanii str. Neff	14916665
ACA1_222650	mRNA	ACA1_222650	NW_004457406.1	44161	47499	R	ACA1_222650	complement(join(<44161..44297,44493..44553,44682..45006,45097..45152,45278..45841,45965..46021,46092..46551,46644..46766,46860..47221,47285..>47499))	Acanthamoeba castellanii str. Neff	14916666
ACA1_222660	mRNA	ACA1_222660	NW_004457406.1	47994	48320	D	ACA1_222660	join(<47994..48043,48068..>48320)	Acanthamoeba castellanii str. Neff	14916667
ACA1_222670	mRNA	ACA1_222670	NW_004457406.1	48384	49862	R	ACA1_222670	complement(join(<48384..48593,48697..48848,48972..49104,49250..49409,49573..>49862))	Acanthamoeba castellanii str. Neff	14916668
ACA1_222680	mRNA	ACA1_222680	NW_004457406.1	50271	52378	R	ACA1_222680	complement(join(<50271..50336,50367..50554,50618..50762,50864..50979,51046..51215,51308..51443,51550..51805,51917..52025,52119..>52378))	Acanthamoeba castellanii str. Neff	14916669
ACA1_222690	mRNA	ACA1_222690	NW_004457406.1	52668	58786	R	ACA1_222690	complement(join(<52668..52859,52971..53066,53165..53336,53458..53529,53597..53652,53760..53839,53960..54305,54396..54495,54578..54709,54845..54954,55042..55160,55266..55337,55404..55497,55595..55672,55747..55826,55899..55997,56125..56186,56250..56361,56447..56521,56603..56705,56800..56947,57039..57151,57255..57313,57391..57455,57525..57603,57704..57807,57916..58028,58093..58165,58264..58461,58540..58582,58729..>58786))	Acanthamoeba castellanii str. Neff	14916670
ACA1_222700	mRNA	ACA1_222700	NW_004457406.1	58959	60518	R	ACA1_222700	complement(join(<58959..59712,59798..60013,60095..60212,60280..60369,60455..>60518))	Acanthamoeba castellanii str. Neff	14916671
ACA1_222710	mRNA	ACA1_222710	NW_004457406.1	60900	62090	R	ACA1_222710	complement(join(<60900..61026,61086..61328,61425..61543,61610..61684,61812..>62090))	Acanthamoeba castellanii str. Neff	14916724
ACA1_222720	mRNA	ACA1_222720	NW_004457406.1	62536	64250	R	ACA1_222720	complement(join(<62536..62693,62775..62867,62994..63069,63159..63215,63341..63466,63573..63648,63705..63831,63916..64015,64104..>64250))	Acanthamoeba castellanii str. Neff	14916725
ACA1_222730	mRNA	ACA1_222730	NW_004457406.1	64925	66692	R	ACA1_222730	complement(join(<64925..65655,65786..65988,66034..66122,66228..>66692))	Acanthamoeba castellanii str. Neff	14916726
ACA1_222740	mRNA	ACA1_222740	NW_004457406.1	67610	72372	D	ACA1_222740	join(<67610..68074,68243..68302,68379..68447,68563..68685,68761..68835,68913..69113,69130..69292,69388..69647,69772..69876,69959..70156,70284..70404,70486..70676,70785..70929,71065..71223,71337..71460,71526..71646,71741..71908,72121..72153,72286..>72372)	Acanthamoeba castellanii str. Neff	14916727
ACA1_222750	mRNA	ACA1_222750	NW_004457406.1	72501	73424	D	ACA1_222750	join(<72501..72552,72625..72711,72876..72970,73088..73179,73280..>73424)	Acanthamoeba castellanii str. Neff	14916728
ACA1_222760	mRNA	ACA1_222760	NW_004457406.1	73960	74511	D	ACA1_222760	join(<73960..74022,74150..74379,74469..>74511)	Acanthamoeba castellanii str. Neff	14916729
ACA1_222770	mRNA	ACA1_222770	NW_004457406.1	74682	79892	D	ACA1_222770	join(<74682..75075,75183..75237,75305..75368,75439..75469,75542..75637,75726..75805,75936..76008,76127..76210,76340..76413,76502..76603,76715..76832,76959..77040,77172..77409,77504..77559,77642..77747,77834..78588,78721..78847,78990..79090,79123..79135,79199..79312,79484..79757,79846..>79892)	Acanthamoeba castellanii str. Neff	14916730
ACA1_222780	mRNA	ACA1_222780	NW_004457406.1	80112	82059	R	ACA1_222780	complement(join(<80112..80210,80379..80461,80566..80689,80811..80959,81049..81133,81397..81426,81554..81750,81879..>82059))	Acanthamoeba castellanii str. Neff	14916731
ACA1_222790	mRNA	ACA1_222790	NW_004457406.1	82404	84223	R	ACA1_222790	complement(join(<82404..82487,82604..82703,82852..82914,83004..83146,83276..83456,83587..83659,83742..83897,83930..84071,84140..>84223))	Acanthamoeba castellanii str. Neff	14916760
ACA1_222800	mRNA	ACA1_222800	NW_004457406.1	84410	84766	R	ACA1_222800	complement(<84410..>84766)	Acanthamoeba castellanii str. Neff	14916761
ACA1_222910	mRNA	ACA1_222910	NW_004457406.1	85042	85278	R	ACA1_222910	complement(<85042..>85278)	Acanthamoeba castellanii str. Neff	14916762
ACA1_222920	mRNA	ACA1_222920	NW_004457406.1	85805	86755	R	ACA1_222920	complement(join(<85805..85843,85906..86078,86163..86187,86362..86438,86524..>86755))	Acanthamoeba castellanii str. Neff	14916763
ACA1_222930	mRNA	ACA1_222930	NW_004457406.1	86958	87253	R	ACA1_222930	complement(join(<86958..87105,87243..>87253))	Acanthamoeba castellanii str. Neff	14916764
ACA1_223040	mRNA	ACA1_223040	NW_004457406.1	88244	93911	R	ACA1_223040	complement(join(<88244..88342,88455..88550,88625..88747,88835..89044,89121..89213,89305..89378,89448..89475,89617..89668,89737..89827,90002..90072,90159..90307,90406..90534,90804..90883,90987..91046,91170..91258,91333..91409,91474..91541,91717..91789,92000..92176,92211..92419,92499..92763,92824..93270,93337..93410,93491..93584,93694..93757,93904..>93911))	Acanthamoeba castellanii str. Neff	14916765
ACA1_223050	mRNA	ACA1_223050	NW_004457406.1	94400	94917	R	ACA1_223050	complement(join(<94400..94558,94693..>94917))	Acanthamoeba castellanii str. Neff	14916766
ACA1_223060	mRNA	ACA1_223060	NW_004457406.1	95279	96737	R	ACA1_223060	complement(join(<95279..95286,95380..95500,95566..95656,95731..95817,95909..96039,96137..96223,96284..96366,96492..96582,96654..>96737))	Acanthamoeba castellanii str. Neff	14916767
ACA1_223070	mRNA	ACA1_223070	NW_004457406.1	96836	98966	D	ACA1_223070	join(<96836..96886,97014..97136,97236..97396,97459..97574,97668..97718,97907..97994,98092..98224,98307..98435,98552..98651,98797..>98966)	Acanthamoeba castellanii str. Neff	14916768
ACA1_223080	mRNA	ACA1_223080	NW_004457406.1	99087	100885	R	ACA1_223080	complement(join(<99087..99173,99323..99381,99466..99523,99606..99823,99921..100137,100222..100345,100482..100687,100763..>100885))	Acanthamoeba castellanii str. Neff	14916769
ACA1_223190	mRNA	ACA1_223190	NW_004457406.1	101744	101986	R	ACA1_223190	complement(<101744..>101986)	Acanthamoeba castellanii str. Neff	14916698
ACA1_223200	mRNA	ACA1_223200	NW_004457406.1	102503	102721	R	ACA1_223200	complement(<102503..>102721)	Acanthamoeba castellanii str. Neff	14916699
ACA1_223220	mRNA	ACA1_223220	NW_004457406.1	103998	105888	R	ACA1_223220	complement(join(<103998..104145,104291..104490,104638..104692,104750..104815,104914..105065,105135..105361,105517..105591,105717..>105888))	Acanthamoeba castellanii str. Neff	14916701
ACA1_223230	mRNA	ACA1_223230	NW_004457406.1	106199	108099	R	ACA1_223230	complement(join(<106199..106324,106464..106556,106649..106753,106899..107028,107130..107295,107406..107484,107547..107599,107736..107859,107959..>108099))	Acanthamoeba castellanii str. Neff	14916702
ACA1_223240	mRNA	ACA1_223240	NW_004457406.1	108175	112302	R	ACA1_223240	complement(join(<108175..108279,108352..108538,108638..108807,108901..109069,109159..109306,109389..109627,109716..109844,109928..110136,110312..110409,110487..110589,110703..111123,111245..111374,111463..111537,111642..111757,111853..111914,111988..>112302))	Acanthamoeba castellanii str. Neff	14916703
ACA1_223260	mRNA	ACA1_223260	NW_004457406.1	116182	116532	D	ACA1_223260	join(<116182..116216,116286..>116532)	Acanthamoeba castellanii str. Neff	14916705
ACA1_223270	mRNA	ACA1_223270	NW_004457406.1	116582	116987	D	ACA1_223270	join(<116582..116662,116812..116941,116965..>116987)	Acanthamoeba castellanii str. Neff	14916706
ACA1_223280	mRNA	ACA1_223280	NW_004457406.1	117485	118717	R	ACA1_223280	complement(join(<117485..117837,117900..118129,118236..118435,118679..>118717))	Acanthamoeba castellanii str. Neff	14916707
ACA1_223290	mRNA	ACA1_223290	NW_004457406.1	119042	120835	R	ACA1_223290	complement(join(<119042..119190,119282..119401,119482..119577,119655..119794,119884..119941,120130..120361,120474..120551,120758..>120835))	Acanthamoeba castellanii str. Neff	14916708
ACA1_223300	mRNA	ACA1_223300	NW_004457406.1	121536	125949	D	ACA1_223300	join(<121536..121547,121637..121911,121926..122032,122158..122363,122492..122613,122725..122859,122997..123229,123342..123491,123611..123867,123951..124247,124382..124506,124603..124789,124929..125173,125277..125397,125505..125607,125771..>125949)	Acanthamoeba castellanii str. Neff	14916709
ACA1_223310	mRNA	ACA1_223310	NW_004457406.1	126108	129216	R	ACA1_223310	complement(join(<126108..126296,126382..126503,126621..126677,126770..126860,127008..127174,127285..127392,127494..127556,127718..127825,127903..128007,128165..128282,128364..128520,128651..128736,128816..128881,128956..>129216))	Acanthamoeba castellanii str. Neff	14916710
ACA1_223320	mRNA	ACA1_223320	NW_004457406.1	129855	131203	D	ACA1_223320	join(<129855..129885,130074..130167,130272..130325,130436..130542,130683..130756,130860..130995,131097..>131203)	Acanthamoeba castellanii str. Neff	14916711
ACA1_223330	mRNA	ACA1_223330	NW_004457406.1	131423	133152	D	ACA1_223330	join(<131423..131534,131636..131725,131844..131961,132052..132151,132232..132320,132390..>133152)	Acanthamoeba castellanii str. Neff	14916712
ACA1_223340	mRNA	ACA1_223340	NW_004457406.1	133354	135446	R	ACA1_223340	complement(join(<133354..133646,133743..133809,133918..134032,134116..134195,134305..134404,134492..135248,135380..>135446))	Acanthamoeba castellanii str. Neff	14916713
ACA1_223350	mRNA	ACA1_223350	NW_004457406.1	135706	138925	D	ACA1_223350	join(<135706..135926,136073..136514,136636..136743,136839..136932,137078..137168,137202..137248,137290..137375,137510..137620,137782..137872,137998..138077,138185..138324,138434..138588,138667..138734,138815..>138925)	Acanthamoeba castellanii str. Neff	14916714
ACA1_223460	mRNA	ACA1_223460	NW_004457406.1	139649	140914	D	ACA1_223460	join(<139649..139748,140268..>140914)	Acanthamoeba castellanii str. Neff	14916715
ACA1_223570	mRNA	ACA1_223570	NW_004457406.1	141577	143671	D	ACA1_223570	join(<141577..141730,141785..141794,142091..142181,142309..142494,142643..142957,143045..143106,143234..143348,143474..>143671)	Acanthamoeba castellanii str. Neff	14916716
ACA1_223680	mRNA	ACA1_223680	NW_004457406.1	143942	148277	D	ACA1_223680	join(<143942..143963,144176..144252,144423..145730,147042..147928,148013..>148277)	Acanthamoeba castellanii str. Neff	14916672
ACA1_223790	mRNA	ACA1_223790	NW_004457406.1	148217	149087	R	ACA1_223790	complement(join(<148217..148273,148382..148529,148634..148719,148812..148899,149083..>149087))	Acanthamoeba castellanii str. Neff	14916673
ACA1_223900	mRNA	ACA1_223900	NW_004457406.1	149086	149968	D	ACA1_223900	join(<149086..149309,149395..149525,149636..149695,149787..>149968)	Acanthamoeba castellanii str. Neff	14916675
ACA1_223910	mRNA	ACA1_223910	NW_004457406.1	150491	151456	R	ACA1_223910	complement(<150491..>151456)	Acanthamoeba castellanii str. Neff	14916674
ACA1_223920	mRNA	ACA1_223920	NW_004457406.1	151601	152640	R	ACA1_223920	complement(join(<151601..151792,151942..152054,152313..152402,152475..>152640))	Acanthamoeba castellanii str. Neff	14916676
ACA1_223930	mRNA	ACA1_223930	NW_004457406.1	153246	155130	D	ACA1_223930	join(<153246..153357,153478..153651,153762..153914,154014..154193,154304..154551,154662..154866,154964..>155130)	Acanthamoeba castellanii str. Neff	14916677
ACA1_224040	mRNA	ACA1_224040	NW_004457406.1	155416	156290	R	ACA1_224040	complement(join(<155416..155604,155699..155819,155906..155968,156088..156121,156179..>156290))	Acanthamoeba castellanii str. Neff	14916678
ACA1_224050	mRNA	ACA1_224050	NW_004457406.1	156331	156693	R	ACA1_224050	complement(<156331..>156693)	Acanthamoeba castellanii str. Neff	14916679
ACA1_224160	mRNA	ACA1_224160	NW_004457406.1	158406	159181	D	ACA1_224160	join(<158406..158534,158652..158804,158903..>159181)	Acanthamoeba castellanii str. Neff	14916680
ACA1_224170	mRNA	ACA1_224170	NW_004457406.1	159263	160873	R	ACA1_224170	complement(join(<159263..159366,159447..159509,159753..159828,159904..160086,160221..160327,160561..>160873))	Acanthamoeba castellanii str. Neff	14916681
ACA1_224180	mRNA	ACA1_224180	NW_004457406.1	161201	161487	R	ACA1_224180	complement(join(<161201..161326,161385..161468,161479..>161487))	Acanthamoeba castellanii str. Neff	14916682
ACA1_224290	mRNA	ACA1_224290	NW_004457406.1	163754	164929	R	ACA1_224290	complement(join(<163754..163879,163936..164019,164102..164206,164283..164339,164428..164552,164653..164775,164884..>164929))	Acanthamoeba castellanii str. Neff	14916683
ACA1_224300	mRNA	ACA1_224300	NW_004457406.1	165169	165867	D	ACA1_224300	<165169..>165867	Acanthamoeba castellanii str. Neff	14916684
ACA1_224310	mRNA	ACA1_224310	NW_004457406.1	166152	168215	D	ACA1_224310	join(<166152..166379,166474..166536,166617..166677,166745..166829,166958..167043,167149..167219,167308..167426,167524..167569,167682..167771,167849..167962,168063..>168215)	Acanthamoeba castellanii str. Neff	14916685
ACA1_224330	mRNA	ACA1_224330	NW_004457406.1	169200	170812	D	ACA1_224330	join(<169200..169502,169619..169782,169891..170010,170032..170109,170202..170386,170461..170494,170547..170675,170746..>170812)	Acanthamoeba castellanii str. Neff	14916687
ACA1_224340	mRNA	ACA1_224340	NW_004457406.1	171047	174502	D	ACA1_224340	join(<171047..171086,171150..171208,171295..171477,171550..171603,171679..171822,171882..172034,172094..172240,172319..172429,172498..172599,172662..172836,172893..173131,173214..173320,173389..173738,173811..>174502)	Acanthamoeba castellanii str. Neff	14916688
ACA1_224350	mRNA	ACA1_224350	NW_004457406.1	175378	176652	D	ACA1_224350	join(<175378..175591,175684..176281,176380..176514,176601..>176652)	Acanthamoeba castellanii str. Neff	14916689
ACA1_224360	mRNA	ACA1_224360	NW_004457406.1	177141	179825	D	ACA1_224360	join(<177141..177162,177232..177305,177377..177463,177540..177713,177830..178001,178063..178284,178361..178496,178581..178651,178755..179060,179150..179218,179311..179446,179514..179587,179656..>179825)	Acanthamoeba castellanii str. Neff	14916690
ACA1_224370	mRNA	ACA1_224370	NW_004457406.1	179972	186696	R	ACA1_224370	complement(join(<179972..180070,180104..180242,180378..180546,180648..180762,180853..180961,181097..181156,181303..181409,181585..181720,181853..181943,182040..182107,182208..182335,182450..182590,182771..182860,182951..183005,183107..183354,183496..183591,183666..183725,183830..183936,184000..184066,184161..184274,184379..184601,184709..184956,185033..185095,185190..185256,185374..185449,185544..185730,185877..186014,186140..186250,186352..186435,186643..>186696))	Acanthamoeba castellanii str. Neff	14916691
ACA1_224380	mRNA	ACA1_224380	NW_004457406.1	186873	188910	D	ACA1_224380	join(<186873..187754,187832..187909,187991..188097,188176..188273,188396..188483,188568..188717,188790..>188910)	Acanthamoeba castellanii str. Neff	14916650
ACA1_224390	mRNA	ACA1_224390	NW_004457406.1	189204	192078	R	ACA1_224390	complement(join(<189204..189277,189405..189814,189839..190114,190197..190300,190409..190663,190761..190904,191032..191396,191474..191867,192022..>192078))	Acanthamoeba castellanii str. Neff	14916651
ACA1_224400	mRNA	ACA1_224400	NW_004457406.1	192531	193991	D	ACA1_224400	join(<192531..192704,192862..192978,193135..193198,193299..193459,193541..193648,193731..>193991)	Acanthamoeba castellanii str. Neff	14916652
ACA1_224410	mRNA	ACA1_224410	NW_004457406.1	194673	197258	D	ACA1_224410	join(<194673..195137,195233..195278,195431..195560,195652..195844,195952..196047,196127..196339,196417..196556,196616..>197258)	Acanthamoeba castellanii str. Neff	14916653
ACA1_224420	mRNA	ACA1_224420	NW_004457406.1	197253	198327	R	ACA1_224420	complement(join(<197253..197479,197541..197709,197837..197899,197969..198090,198195..>198327))	Acanthamoeba castellanii str. Neff	14916654
ACA1_224430	mRNA	ACA1_224430	NW_004457406.1	198498	199758	D	ACA1_224430	join(<198498..198658,198787..198899,199034..199161,199255..199364,199424..199539,199652..>199758)	Acanthamoeba castellanii str. Neff	14916655
ACA1_224440	mRNA	ACA1_224440	NW_004457406.1	200736	201122	R	ACA1_224440	complement(<200736..>201122)	Acanthamoeba castellanii str. Neff	14916656
ACA1_224450	mRNA	ACA1_224450	NW_004457406.1	201198	201723	D	ACA1_224450	join(<201198..201327,201396..201472,201679..>201723)	Acanthamoeba castellanii str. Neff	14916657
ACA1_224460	mRNA	ACA1_224460	NW_004457406.1	202084	202650	R	ACA1_224460	complement(join(<202084..202346,202359..>202650))	Acanthamoeba castellanii str. Neff	14916658
ACA1_224470	mRNA	ACA1_224470	NW_004457406.1	203493	208812	D	ACA1_224470	join(<203493..203582,203706..203787,203872..204010,204117..204240,204353..204448,204585..204744,204885..204981,205124..205199,205346..205434,205520..205649,205727..206397,206504..206625,206801..206969,207058..207220,207240..207518,207575..207664,207787..207931,208048..208254,208365..208666,208807..>208812)	Acanthamoeba castellanii str. Neff	14916659
ACA1_224480	mRNA	ACA1_224480	NW_004457406.1	208836	210166	D	ACA1_224480	join(<208836..208965,209038..209174,209331..209828,209933..>210166)	Acanthamoeba castellanii str. Neff	14916660
ACA1_224490	mRNA	ACA1_224490	NW_004457406.1	210304	212955	R	ACA1_224490	complement(join(<210304..210386,210487..210580,210658..210848,210973..211168,211290..211368,211530..211633,211779..211865,211988..212125,212263..212359,212460..212557,212734..>212955))	Acanthamoeba castellanii str. Neff	14916661
ACA1_224500	mRNA	ACA1_224500	NW_004457406.1	213409	219665	R	ACA1_224500	complement(join(<213409..213566,213685..213794,213920..214004,214098..214213,214394..214535,214656..214749,214871..214981,215103..215196,215307..215556,215665..215797,215992..216105,216212..216304,216386..216475,216580..216690,216787..217046,217058..217102,217194..217293,217408..217629,217745..217855,217966..218071,218164..218291,218380..218475,218569..218662,218766..218891,218990..219072,219291..>219665))	Acanthamoeba castellanii str. Neff	14916662
ACA1_224510	mRNA	ACA1_224510	NW_004457406.1	220080	220715	R	ACA1_224510	complement(<220080..>220715)	Acanthamoeba castellanii str. Neff	14916663
ACA1_224530	mRNA	ACA1_224530	NW_004457406.1	221878	222675	R	ACA1_224530	complement(<221878..>222675)	Acanthamoeba castellanii str. Neff	14916732
ACA1_224540	mRNA	ACA1_224540	NW_004457406.1	223153	224429	D	ACA1_224540	join(<223153..223247,223341..223424,223650..223747,223841..223955,224063..>224429)	Acanthamoeba castellanii str. Neff	14916733
ACA1_224550	mRNA	ACA1_224550	NW_004457406.1	224496	227101	D	ACA1_224550	join(<224496..224632,224763..224914,224998..225065,225211..225275,225416..225522,225703..225748,225863..226131,226215..226417,226497..226528,226612..226635,226721..226748,226856..>227101)	Acanthamoeba castellanii str. Neff	14916734
ACA1_224560	mRNA	ACA1_224560	NW_004457406.1	227496	235299	D	ACA1_224560	join(<227496..227574,227682..227755,227828..227911,228081..228212,228298..228691,228777..229059,229167..229336,229418..229530,229632..229859,230034..230292,230404..230548,230670..231303,231336..231452,231567..231725,231866..232068,232230..232248,232401..232653,232723..232936,233008..233163,233323..233470,233570..233678,233855..234204,234290..234458,234575..>235299)	Acanthamoeba castellanii str. Neff	14916735
ACA1_224570	mRNA	ACA1_224570	NW_004457406.1	235380	235861	R	ACA1_224570	complement(join(<235380..235383,235469..235651,235719..>235861))	Acanthamoeba castellanii str. Neff	14916736
ACA1_224580	mRNA	ACA1_224580	NW_004457406.1	236176	236828	R	ACA1_224580	complement(join(<236176..236398,236488..>236828))	Acanthamoeba castellanii str. Neff	14916737
ACA1_224690	mRNA	ACA1_224690	NW_004457406.1	238758	241709	D	ACA1_224690	join(<238758..239486,239520..>241709)	Acanthamoeba castellanii str. Neff	14916738
ACA1_224700	mRNA	ACA1_224700	NW_004457406.1	241812	242330	R	ACA1_224700	complement(<241812..>242330)	Acanthamoeba castellanii str. Neff	14916739
ACA1_224710	mRNA	ACA1_224710	NW_004457406.1	242483	243263	R	ACA1_224710	complement(join(<242483..242597,242738..242814,242957..243067,243171..>243263))	Acanthamoeba castellanii str. Neff	14916740
ACA1_224720	mRNA	ACA1_224720	NW_004457406.1	243661	244091	D	ACA1_224720	join(<243661..243804,243921..>244091)	Acanthamoeba castellanii str. Neff	14916741
ACA1_224840	mRNA	ACA1_224840	NW_004457406.1	251459	253056	R	ACA1_224840	complement(join(<251459..251647,252043..252123,252137..252172,252219..252328,252418..252737,252968..>253056))	Acanthamoeba castellanii str. Neff	14916743
ACA1_224850	mRNA	ACA1_224850	NW_004457406.1	253625	254489	D	ACA1_224850	join(<253625..253668,253781..253871,253977..254054,254167..254241,254373..>254489)	Acanthamoeba castellanii str. Neff	14916744
ACA1_224860	mRNA	ACA1_224860	NW_004457406.1	254791	263653	D	ACA1_224860	join(<254791..254820,254929..255039,255185..255341,255466..255552,255628..255651,255678..255787,255865..255945,256053..256191,256315..256434,256512..256688,256787..256931,257030..257222,257306..257532,257631..257722,257829..258001,258139..258285,258379..258576,258677..258809,258889..259057,259163..259388,259465..259595,259680..260976,261082..261188,261261..261358,261371..261653,261778..261892,261983..262126,262267..262423,262554..>263653)	Acanthamoeba castellanii str. Neff	14916745
ACA1_224870	mRNA	ACA1_224870	NW_004457406.1	263995	265756	D	ACA1_224870	join(<263995..264075,264151..264280,264469..264569,264749..264862,264960..265268,265382..265494,265573..>265756)	Acanthamoeba castellanii str. Neff	14916746
ACA1_224880	mRNA	ACA1_224880	NW_004457406.1	267624	268439	D	ACA1_224880	join(<267624..267770,268019..268094,268164..268253,268333..>268439)	Acanthamoeba castellanii str. Neff	14916747
ACA1_224890	mRNA	ACA1_224890	NW_004457406.1	269734	270283	R	ACA1_224890	complement(join(<269734..269754,269915..>270283))	Acanthamoeba castellanii str. Neff	14916748
ACA1_224900	mRNA	ACA1_224900	NW_004457406.1	270727	272013	D	ACA1_224900	join(<270727..271025,271179..>272013)	Acanthamoeba castellanii str. Neff	14916749
ACA1_224910	mRNA	ACA1_224910	NW_004457406.1	273720	275093	D	ACA1_224910	join(<273720..273753,273838..274050,274165..274678,274756..274894,274986..>275093)	Acanthamoeba castellanii str. Neff	14916750
ACA1_224920	mRNA	ACA1_224920	NW_004457406.1	275157	281598	R	ACA1_224920	complement(join(<275157..277552,277633..277898,277993..278134,278213..278379,278481..278718,278867..278989,279129..279215,279300..279379,279478..279766,279888..280023,280109..280200,280308..280404,280503..280628,280759..280918,281041..281111,281221..>281598))	Acanthamoeba castellanii str. Neff	14916751
ACA1_224930	mRNA	ACA1_224930	NW_004457406.1	282864	283738	D	ACA1_224930	join(<282864..283474,283540..>283738)	Acanthamoeba castellanii str. Neff	14916693
ACA1_224940	mRNA	ACA1_224940	NW_004457406.1	286402	288882	D	ACA1_224940	join(<286402..286937,286965..287083,287099..287193,287323..>288882)	Acanthamoeba castellanii str. Neff	14916694
ACA1_224950	mRNA	ACA1_224950	NW_004457406.1	289021	292212	R	ACA1_224950	complement(join(<289021..289358,289491..289626,289722..289814,289923..290101,290214..290313,290390..290473,290589..290825,290911..291047,291147..291300,291465..291648,291718..291808,291966..>292212))	Acanthamoeba castellanii str. Neff	14916695
ACA1_225060	mRNA	ACA1_225060	NW_004457406.1	292299	296585	R	ACA1_225060	complement(join(<292299..292419,292489..292611,292694..292838,292947..293313,293728..293814,293898..294038,294156..294341,294439..294508,294611..294726,294823..295236,295343..295380,295453..295600,295673..295759,295872..295979,296095..296141,296213..296449,296564..>296585))	Acanthamoeba castellanii str. Neff	14916696
ACA1_002890	mRNA	ACA1_002890	NW_004457405.1	400	989	D	ACA1_002890	join(<400..792,875..>989)	Acanthamoeba castellanii str. Neff	14916644
ACA1_003000	mRNA	ACA1_003000	NW_004457405.1	2444	7810	R	ACA1_003000	complement(join(<2444..2462,2512..3578,7018..7502,7675..>7810))	Acanthamoeba castellanii str. Neff	14916645
ACA1_003110	mRNA	ACA1_003110	NW_004457405.1	10678	12316	R	ACA1_003110	complement(join(<10678..11070,11954..>12316))	Acanthamoeba castellanii str. Neff	14916643
ACA1_003220	mRNA	ACA1_003220	NW_004457405.1	12746	17531	D	ACA1_003220	join(<12746..13351,13546..14309,14797..15688,16944..>17531)	Acanthamoeba castellanii str. Neff	14916647
ACA1_003530	mRNA	ACA1_003530	NW_004457405.1	18571	18968	R	ACA1_003530	complement(join(<18571..18820,18898..>18968))	Acanthamoeba castellanii str. Neff	14916646
ACA1_003640	mRNA	ACA1_003640	NW_004457405.1	23435	23876	D	ACA1_003640	join(<23435..23566,23673..>23876)	Acanthamoeba castellanii str. Neff	14916648
ACA1_003650	mRNA	ACA1_003650	NW_004457405.1	24521	26549	R	ACA1_003650	complement(join(<24521..24526,24588..24683,24817..24930,25010..25132,25268..25346,25437..25524,25624..25717,25782..25917,25957..26012,26115..26255,26334..>26549))	Acanthamoeba castellanii str. Neff	14916649
ACA1_082740	mRNA	ACA1_082740	NW_004457404.1	3906	6711	D	ACA1_082740	join(<3906..3954,4016..4153,4243..4806,4891..5195,5359..5707,5834..6165,6278..6483,6570..>6711)	Acanthamoeba castellanii str. Neff	14916640
ACA1_082750	mRNA	ACA1_082750	NW_004457404.1	8489	9511	D	ACA1_082750	join(<8489..8669,8736..8799,8883..9008,9106..9212,9309..>9511)	Acanthamoeba castellanii str. Neff	14916641
ACA1_082860	mRNA	ACA1_082860	NW_004457404.1	11954	13963	R	ACA1_082860	complement(join(<11954..12128,12201..12298,12367..12457,12562..12639,12735..12864,12960..13049,13173..13286,13422..13520,13643..13736,13835..>13963))	Acanthamoeba castellanii str. Neff	14916642
ACA1_031510	mRNA	ACA1_031510	NW_004457402.1	83	1871	R	ACA1_031510	complement(join(<83..216,319..409,759..852,930..1041,1151..1244,1356..1429,1581..1670,1775..>1871))	Acanthamoeba castellanii str. Neff	14916624
ACA1_031520	mRNA	ACA1_031520	NW_004457402.1	2062	3592	R	ACA1_031520	complement(join(<2062..2188,2269..2336,2430..2510,2577..2704,2833..2893,2955..3157,3272..3354,3417..>3592))	Acanthamoeba castellanii str. Neff	14916622
ACA1_031530	mRNA	ACA1_031530	NW_004457402.1	3866	5156	R	ACA1_031530	complement(join(<3866..4669,4704..>5156))	Acanthamoeba castellanii str. Neff	14916623
ACA1_031540	mRNA	ACA1_031540	NW_004457402.1	5809	7284	D	ACA1_031540	join(<5809..5916,6018..6142,6223..6395,6503..6641,6720..6811,6894..7034,7113..7228,7252..>7284)	Acanthamoeba castellanii str. Neff	14916630
ACA1_031560	mRNA	ACA1_031560	NW_004457402.1	11192	12296	D	ACA1_031560	join(<11192..11429,11624..11998,12145..>12296)	Acanthamoeba castellanii str. Neff	14916632
ACA1_031570	mRNA	ACA1_031570	NW_004457402.1	12404	17140	R	ACA1_031570	complement(join(<12404..12517,12605..12734,12812..13025,13119..13204,13275..13420,13506..13588,13686..13939,14012..14075,14177..14255,14355..14426,14489..14584,14670..14840,14937..15053,15143..15282,15361..15471,15558..15678,15783..15844,15919..16120,16207..16293,16364..16474,16565..16698,16782..16863,16948..17018,17080..>17140))	Acanthamoeba castellanii str. Neff	14916633
ACA1_031580	mRNA	ACA1_031580	NW_004457402.1	17274	18358	R	ACA1_031580	complement(join(<17274..17279,17365..18054,18143..>18358))	Acanthamoeba castellanii str. Neff	14916634
ACA1_031590	mRNA	ACA1_031590	NW_004457402.1	18630	19748	D	ACA1_031590	<18630..>19748	Acanthamoeba castellanii str. Neff	14916625
ACA1_031600	mRNA	ACA1_031600	NW_004457402.1	19829	23851	R	ACA1_031600	complement(join(<19829..19988,20083..20604,20677..21493,21558..21698,21798..21966,22102..22241,22309..22426,22525..22688,22755..22863,22938..23098,23183..23434,23528..23623,23686..23742,23830..>23851))	Acanthamoeba castellanii str. Neff	14916626
ACA1_031610	mRNA	ACA1_031610	NW_004457402.1	24087	26029	R	ACA1_031610	complement(join(<24087..24225,24317..24426,24496..24621,24712..24889,24959..25054,25130..25275,25370..25585,25604..>26029))	Acanthamoeba castellanii str. Neff	14916627
ACA1_031620	mRNA	ACA1_031620	NW_004457402.1	26437	29863	R	ACA1_031620	complement(join(<26437..26549,26641..26746,26819..26885,26973..27048,27374..27446,27511..27578,27643..27724,27815..27897,27964..28038,28108..28191,28256..28319,28378..28484,28546..28677,28755..28826,28973..29038,29209..29255,29315..29403,29472..29575,29650..>29863))	Acanthamoeba castellanii str. Neff	14916628
ACA1_031630	mRNA	ACA1_031630	NW_004457402.1	30171	33872	D	ACA1_031630	join(<30171..30216,30322..30485,30547..30656,30725..30779,30843..30902,30975..31123,31214..31272,31343..31416,31502..31611,31690..31783,31845..31962,32052..32133,32242..32317,32416..32494,32578..32678,32746..32810,33354..33477,33562..33691,33763..>33872)	Acanthamoeba castellanii str. Neff	14916629
ACA1_031640	mRNA	ACA1_031640	NW_004457402.1	33999	38161	R	ACA1_031640	complement(join(<33999..34455,34558..34712,34806..34926,35038..35231,35335..35444,35583..35651,35744..35832,35919..36005,36151..36249,36355..36773,36899..37381,37440..37682,37850..>38161))	Acanthamoeba castellanii str. Neff	14916635
ACA1_031650	mRNA	ACA1_031650	NW_004457402.1	38437	39880	R	ACA1_031650	complement(join(<38437..38953,39040..39142,39244..39317,39407..39516,39661..39718,39798..>39880))	Acanthamoeba castellanii str. Neff	14916636
ACA1_031660	mRNA	ACA1_031660	NW_004457402.1	40415	42090	R	ACA1_031660	complement(join(<40415..41124,41209..41535,41664..>42090))	Acanthamoeba castellanii str. Neff	14916637
ACA1_031670	mRNA	ACA1_031670	NW_004457402.1	42421	45781	D	ACA1_031670	join(<42421..42596,42676..42775,42887..43017,43116..43201,43304..43398,43513..43904,44231..44476,44566..44659,44779..44862,44973..45042,45140..45351,45432..45597,45678..>45781)	Acanthamoeba castellanii str. Neff	14916638
ACA1_031680	mRNA	ACA1_031680	NW_004457402.1	46452	46808	R	ACA1_031680	complement(join(<46452..46502,46570..46649,46730..>46808))	Acanthamoeba castellanii str. Neff	14916639
ACA1_321730	mRNA	ACA1_321730	NW_004457401.1	6053	8517	D	ACA1_321730	join(<6053..6149,6323..6453,6549..6666,6797..7035,7171..7329,7413..7523,7643..7848,7928..8277,8390..>8517)	Acanthamoeba castellanii str. Neff	14916618
ACA1_321740	mRNA	ACA1_321740	NW_004457401.1	9604	12252	R	ACA1_321740	complement(join(<9604..9665,9768..9809,9920..10132,10199..10302,10408..10477,10565..10718,10908..10983,11077..11266,11355..11519,11640..>12252))	Acanthamoeba castellanii str. Neff	14916619
ACA1_321750	mRNA	ACA1_321750	NW_004457401.1	12574	13896	D	ACA1_321750	<12574..>13896	Acanthamoeba castellanii str. Neff	14916620
ACA1_321760	mRNA	ACA1_321760	NW_004457401.1	13978	15553	R	ACA1_321760	complement(join(<13978..14116,14198..14265,14348..14414,14493..14544,14609..14750,14883..15174,15260..15404,15478..>15553))	Acanthamoeba castellanii str. Neff	14916617
ACA1_321770	mRNA	ACA1_321770	NW_004457401.1	15885	16373	R	ACA1_321770	complement(<15885..>16373)	Acanthamoeba castellanii str. Neff	14916613
ACA1_321780	mRNA	ACA1_321780	NW_004457401.1	16759	20394	R	ACA1_321780	complement(join(<16759..16950,17105..17584,17698..17861,17985..18079,18189..18324,18440..18575,18645..18752,18836..18959,19073..19164,19278..19548,19661..19780,19872..19970,20039..>20394))	Acanthamoeba castellanii str. Neff	14916614
ACA1_321790	mRNA	ACA1_321790	NW_004457401.1	21249	26013	D	ACA1_321790	join(<21249..22047,22146..23086,23170..24411,24530..24703,24798..24845,24920..25125,25197..25342,25429..25470,25541..25628,25710..25812,25909..>26013)	Acanthamoeba castellanii str. Neff	14916615
ACA1_321800	mRNA	ACA1_321800	NW_004457401.1	26134	28689	D	ACA1_321800	join(<26134..26224,26291..26372,26439..26524,26627..26705,26780..26893,26982..27177,27264..27394,27491..27706,27809..27876,27964..28111,28200..28329,28429..28514,28584..>28689)	Acanthamoeba castellanii str. Neff	14916616
ACA1_015690	mRNA	ACA1_015690	NW_004457400.1	93	545	R	ACA1_015690	complement(<93..>545)	Acanthamoeba castellanii str. Neff	14916612
ACA1_015800	mRNA	ACA1_015800	NW_004457400.1	5323	8089	R	ACA1_015800	complement(join(<5323..5612,5709..5935,6061..6290,6413..6545,6683..6711,6808..7067,7211..7423,7520..7614,7953..>8089))	Acanthamoeba castellanii str. Neff	14916608
ACA1_016010	mRNA	ACA1_016010	NW_004457400.1	12874	13639	R	ACA1_016010	complement(join(<12874..13106,13164..13409,13522..>13639))	Acanthamoeba castellanii str. Neff	14916609
ACA1_016020	mRNA	ACA1_016020	NW_004457400.1	13737	14510	R	ACA1_016020	complement(join(<13737..14084,14214..>14510))	Acanthamoeba castellanii str. Neff	14916610
ACA1_297990	mRNA	ACA1_297990	NW_004457399.1	6505	6969	D	ACA1_297990	join(<6505..6925,6944..>6969)	Acanthamoeba castellanii str. Neff	14916607
ACA1_298100	mRNA	ACA1_298100	NW_004457399.1	11180	11546	D	ACA1_298100	join(<11180..11186,11286..11383,11466..>11546)	Acanthamoeba castellanii str. Neff	14916604
ACA1_298110	mRNA	ACA1_298110	NW_004457399.1	12921	13308	D	ACA1_298110	join(<12921..13192,13284..>13308)	Acanthamoeba castellanii str. Neff	14916605
ACA1_298220	mRNA	ACA1_298220	NW_004457399.1	13608	15319	D	ACA1_298220	join(<13608..13714,13992..14056,14385..14476,14741..14770,14855..14935,15065..>15319)	Acanthamoeba castellanii str. Neff	14916606
ACA1_023380	mRNA	ACA1_023380	NW_004457398.1	943	1351	D	ACA1_023380	join(<943..1134,1241..>1351)	Acanthamoeba castellanii str. Neff	14916594
ACA1_023390	mRNA	ACA1_023390	NW_004457398.1	1962	6375	R	ACA1_023390	complement(join(<1962..1982,2886..2993,3082..3132,3245..3314,3488..3580,3667..3731,3906..3976,4057..4164,4316..4480,6089..6169,6264..>6375))	Acanthamoeba castellanii str. Neff	14916592
ACA1_023700	mRNA	ACA1_023700	NW_004457398.1	6487	6915	R	ACA1_023700	complement(<6487..>6915)	Acanthamoeba castellanii str. Neff	14916593
ACA1_023810	mRNA	ACA1_023810	NW_004457398.1	11947	12507	R	ACA1_023810	complement(join(<11947..12098,12189..>12507))	Acanthamoeba castellanii str. Neff	14916595
ACA1_023820	mRNA	ACA1_023820	NW_004457398.1	13140	16803	D	ACA1_023820	join(<13140..13607,13769..14959,15069..15846,15931..16190,16263..16501,16590..>16803)	Acanthamoeba castellanii str. Neff	14916596
ACA1_023830	mRNA	ACA1_023830	NW_004457398.1	17022	18222	R	ACA1_023830	complement(join(<17022..17227,17328..17616,17685..17893,18156..>18222))	Acanthamoeba castellanii str. Neff	14916597
ACA1_023840	mRNA	ACA1_023840	NW_004457398.1	18820	20733	D	ACA1_023840	join(<18820..18943,19006..19116,19220..19264,19385..19536,19649..19785,19936..20029,20127..20193,20267..>20733)	Acanthamoeba castellanii str. Neff	14916598
ACA1_023850	mRNA	ACA1_023850	NW_004457398.1	20919	24221	R	ACA1_023850	complement(join(<20919..21254,21374..21467,21549..21635,21708..21784,21869..21943,22087..22182,22296..22412,22523..22642,22878..22993,23109..23196,23335..23435,23576..23653,23914..23964,24074..>24221))	Acanthamoeba castellanii str. Neff	14916599
ACA1_023860	mRNA	ACA1_023860	NW_004457398.1	24284	27019	R	ACA1_023860	complement(join(<24284..24581,24696..24754,24903..25036,25158..25285,25382..25457,25576..25692,25780..25835,25908..26019,26135..26224,26382..26473,26535..26586,26691..26753,26998..>27019))	Acanthamoeba castellanii str. Neff	14916600
ACA1_023870	mRNA	ACA1_023870	NW_004457398.1	27484	30172	R	ACA1_023870	complement(join(<27484..27556,27643..27790,27886..28036,28143..28247,28360..28515,28624..28770,28871..28909,29054..29328,29444..29529,29605..29717,29894..>30172))	Acanthamoeba castellanii str. Neff	14916601
ACA1_023880	mRNA	ACA1_023880	NW_004457398.1	30373	31220	D	ACA1_023880	join(<30373..30424,30497..30573,30706..30786,30911..31000,31092..>31220)	Acanthamoeba castellanii str. Neff	14916602
ACA1_023890	mRNA	ACA1_023890	NW_004457398.1	31500	34382	R	ACA1_023890	complement(join(<31500..31649,31745..31824,31924..31989,32102..32258,32340..32506,32626..32776,32929..33024,33092..33177,33276..33372,33486..33643,33753..33872,34226..34277,34377..>34382))	Acanthamoeba castellanii str. Neff	14916603
ACA1_026700	mRNA	ACA1_026700	NW_004457397.1	115	2728	D	ACA1_026700	join(<115..218,337..467,568..746,886..993,1091..1182,1220..1374,1460..1593,1805..1888,1978..2061,2151..2325,2391..2450,2565..>2728)	Acanthamoeba castellanii str. Neff	14916589
ACA1_026710	mRNA	ACA1_026710	NW_004457397.1	3283	9465	D	ACA1_026710	join(<3283..3396,3625..3750,3857..4020,4139..4220,4313..4452,4627..4837,4992..5137,5240..5436,5559..5720,5992..6022,6167..6309,6396..6518,6635..6771,6840..6908,6998..7084,7211..7276,7386..7463,7579..7711,7806..7921,8058..8207,8337..8480,8625..8776,8903..8996,9098..9266,9368..>9465)	Acanthamoeba castellanii str. Neff	14916590
ACA1_026720	mRNA	ACA1_026720	NW_004457397.1	10072	13387	D	ACA1_026720	join(<10072..10113,10325..10403,10798..10991,11100..11301,11391..11539,11887..12090,12245..12383,12510..13180,13286..>13387)	Acanthamoeba castellanii str. Neff	14916591
ACA1_187230	mRNA	ACA1_187230	NW_004457396.1	6709	8492	R	ACA1_187230	complement(join(<6709..7254,7327..7482,7612..7818,7929..8014,8084..8405,8442..>8492))	Acanthamoeba castellanii str. Neff	14916502
ACA1_187250	mRNA	ACA1_187250	NW_004457396.1	11296	11903	R	ACA1_187250	complement(<11296..>11903)	Acanthamoeba castellanii str. Neff	14916588
ACA1_187260	mRNA	ACA1_187260	NW_004457396.1	12438	14354	R	ACA1_187260	complement(join(<12438..12983,13056..13211,13311..13517,13622..13707,13795..14125,14316..>14354))	Acanthamoeba castellanii str. Neff	14916500
ACA1_187270	mRNA	ACA1_187270	NW_004457396.1	14819	16963	D	ACA1_187270	<14819..>16963	Acanthamoeba castellanii str. Neff	14916501
ACA1_187280	mRNA	ACA1_187280	NW_004457396.1	17705	19612	R	ACA1_187280	complement(join(<17705..18435,18573..18909,19039..19185,19196..19456,19517..>19612))	Acanthamoeba castellanii str. Neff	14916584
ACA1_187290	mRNA	ACA1_187290	NW_004457396.1	20119	22260	R	ACA1_187290	complement(join(<20119..20385,20446..20641,20723..20809,20870..21035,21183..21323,21435..21489,21600..21690,21779..21887,21954..>22260))	Acanthamoeba castellanii str. Neff	14916585
ACA1_187300	mRNA	ACA1_187300	NW_004457396.1	23378	27887	D	ACA1_187300	join(<23378..23407,23559..23705,23830..24009,24121..24226,24328..24446,24610..24768,24914..25093,25183..25335,25435..25663,25775..25959,26080..26269,26353..26495,26613..26819,26893..26968,27075..27241,27459..27656,27825..>27887)	Acanthamoeba castellanii str. Neff	14916586
ACA1_187310	mRNA	ACA1_187310	NW_004457396.1	28252	32669	D	ACA1_187310	join(<28252..28281,28511..28720,28863..28967,29060..29165,29240..29358,29436..29591,29701..29880,29980..30129,30252..30513,30610..30750,30868..31272,31361..31503,31681..31724,31876..32006,32102..32265,32383..32532,32604..>32669)	Acanthamoeba castellanii str. Neff	14916587
ACA1_187320	mRNA	ACA1_187320	NW_004457396.1	34629	37194	R	ACA1_187320	complement(join(<34629..34682,34769..34906,34993..35144,35264..35286,35310..35440,35638..35724,35787..35856,35932..36035,36123..36251,36382..36494,36567..36764,36856..36910,36978..37068,37145..>37194))	Acanthamoeba castellanii str. Neff	14916504
ACA1_187330	mRNA	ACA1_187330	NW_004457396.1	37402	38602	D	ACA1_187330	join(<37402..37433,37501..37583,37687..37731,37821..37895,37980..38220,38299..38409,38482..>38602)	Acanthamoeba castellanii str. Neff	14916505
ACA1_187340	mRNA	ACA1_187340	NW_004457396.1	38693	41264	R	ACA1_187340	complement(join(<38693..38859,38998..39108,39210..39349,39466..39608,39681..39737,39871..39996,40111..40272,40365..40426,40515..40596,40698..40800,40879..40939,41120..>41264))	Acanthamoeba castellanii str. Neff	14916506
ACA1_187350	mRNA	ACA1_187350	NW_004457396.1	41707	42651	R	ACA1_187350	complement(join(<41707..42180,42238..42420,42505..>42651))	Acanthamoeba castellanii str. Neff	14916507
ACA1_187360	mRNA	ACA1_187360	NW_004457396.1	42743	45532	R	ACA1_187360	complement(join(<42743..42943,43033..43199,43344..43430,43517..43784,43865..44025,44154..44237,44343..44511,44619..44751,44866..44941,45080..45158,45244..45422,45517..>45532))	Acanthamoeba castellanii str. Neff	14916508
ACA1_187370	mRNA	ACA1_187370	NW_004457396.1	45633	47608	D	ACA1_187370	join(<45633..45761,45824..45897,45983..46086,46163..46478,46633..46711,46799..46859,46925..47077,47139..>47608)	Acanthamoeba castellanii str. Neff	14916509
ACA1_187380	mRNA	ACA1_187380	NW_004457396.1	47707	49930	D	ACA1_187380	join(<47707..48113,48276..48354,48456..48589,48686..48797,48884..48937,49160..49198,49351..49397,49478..49567,49646..49686,49872..>49930)	Acanthamoeba castellanii str. Neff	14916510
ACA1_187390	mRNA	ACA1_187390	NW_004457396.1	49988	51678	R	ACA1_187390	complement(join(<49988..50704,50801..51276,51366..>51678))	Acanthamoeba castellanii str. Neff	14916511
ACA1_187400	mRNA	ACA1_187400	NW_004457396.1	52480	54626	D	ACA1_187400	join(<52480..52526,52770..53107,53188..53261,53345..53479,53526..>54626)	Acanthamoeba castellanii str. Neff	14916512
ACA1_187410	mRNA	ACA1_187410	NW_004457396.1	55505	57070	R	ACA1_187410	complement(join(<55505..55748,55915..56179,56273..56381,56500..56853,56921..>57070))	Acanthamoeba castellanii str. Neff	14916513
ACA1_187420	mRNA	ACA1_187420	NW_004457396.1	57538	60745	D	ACA1_187420	join(<57538..57926,57998..58153,58221..58292,58370..58476,58542..58665,58738..58815,58898..59076,59150..59201,59262..59305,59630..59733,59801..59900,59975..60150,60246..60434,60659..>60745)	Acanthamoeba castellanii str. Neff	14916514
ACA1_187430	mRNA	ACA1_187430	NW_004457396.1	61496	63421	R	ACA1_187430	complement(join(<61496..61535,61554..61633,61707..61770,61924..62002,62084..62279,62519..62641,62806..62866,63025..63141,63285..>63421))	Acanthamoeba castellanii str. Neff	14916571
ACA1_187440	mRNA	ACA1_187440	NW_004457396.1	63666	65477	D	ACA1_187440	join(<63666..63993,64126..64239,64302..64433,64672..64815,64911..65199,65303..>65477)	Acanthamoeba castellanii str. Neff	14916572
ACA1_187460	mRNA	ACA1_187460	NW_004457396.1	67722	71611	R	ACA1_187460	complement(join(<67722..67862,67997..68071,68151..68254,68327..68502,68604..68711,68804..68874,68958..69812,69901..69983,70071..70157,70205..70217,70380..70492,70563..70597,70687..70744,70829..70925,71006..71364,71539..>71611))	Acanthamoeba castellanii str. Neff	14916574
ACA1_187470	mRNA	ACA1_187470	NW_004457396.1	72790	73490	R	ACA1_187470	complement(join(<72790..72976,73064..73131,73235..73317,73371..73396,73456..>73490))	Acanthamoeba castellanii str. Neff	14916575
ACA1_187480	mRNA	ACA1_187480	NW_004457396.1	73837	74548	D	ACA1_187480	join(<73837..73908,74028..74166,74253..74337,74428..>74548)	Acanthamoeba castellanii str. Neff	14916576
ACA1_187590	mRNA	ACA1_187590	NW_004457396.1	74879	75475	D	ACA1_187590	join(<74879..74892,74969..75039,75130..75240,75321..>75475)	Acanthamoeba castellanii str. Neff	14916577
ACA1_187600	mRNA	ACA1_187600	NW_004457396.1	75630	76436	R	ACA1_187600	complement(join(<75630..75799,75878..75957,76042..76220,76293..>76436))	Acanthamoeba castellanii str. Neff	14916578
ACA1_187610	mRNA	ACA1_187610	NW_004457396.1	77421	80330	D	ACA1_187610	join(<77421..77690,77801..77934,77997..78077,78177..78393,78570..78805,78930..79266,79342..79556,79646..79699,80144..80182,80309..>80330)	Acanthamoeba castellanii str. Neff	14916579
ACA1_187720	mRNA	ACA1_187720	NW_004457396.1	80916	82457	D	ACA1_187720	join(<80916..81075,81182..81299,81373..81476,81576..81671,81777..81846,81923..81993,82085..82195,82303..>82457)	Acanthamoeba castellanii str. Neff	14916580
ACA1_187730	mRNA	ACA1_187730	NW_004457396.1	83061	85919	D	ACA1_187730	join(<83061..83330,83463..83596,83665..83745,83845..84064,84177..84412,84517..84853,84930..85144,85234..85357,85517..85640,85737..85775,85879..>85919)	Acanthamoeba castellanii str. Neff	14916581
ACA1_187740	mRNA	ACA1_187740	NW_004457396.1	86210	87727	R	ACA1_187740	complement(join(<86210..86400,86474..86625,86784..86952,87043..87201,87306..87434,87553..>87727))	Acanthamoeba castellanii str. Neff	14916582
ACA1_187750	mRNA	ACA1_187750	NW_004457396.1	88308	88901	D	ACA1_187750	<88308..>88901	Acanthamoeba castellanii str. Neff	14916583
ACA1_187760	mRNA	ACA1_187760	NW_004457396.1	89153	90536	R	ACA1_187760	complement(join(<89153..90392,90511..>90536))	Acanthamoeba castellanii str. Neff	14916557
ACA1_187770	mRNA	ACA1_187770	NW_004457396.1	90999	92568	R	ACA1_187770	complement(join(<90999..91055,91143..91486,91565..91640,91736..91798,91903..91988,92061..>92568))	Acanthamoeba castellanii str. Neff	14916558
ACA1_187780	mRNA	ACA1_187780	NW_004457396.1	92756	94667	R	ACA1_187780	complement(join(<92756..93473,93675..93736,93813..93910,93989..94058,94123..94180,94278..94348,94429..94496,94643..>94667))	Acanthamoeba castellanii str. Neff	14916559
ACA1_187890	mRNA	ACA1_187890	NW_004457396.1	95023	95650	D	ACA1_187890	join(<95023..95202,95317..95482,95553..>95650)	Acanthamoeba castellanii str. Neff	14916560
ACA1_187900	mRNA	ACA1_187900	NW_004457396.1	95847	98744	R	ACA1_187900	complement(join(<95847..95981,96053..96152,96236..96433,96528..97172,97330..97477,97570..97765,97872..97954,98041..98145,98500..98577,98624..>98744))	Acanthamoeba castellanii str. Neff	14916561
ACA1_188010	mRNA	ACA1_188010	NW_004457396.1	100740	104315	D	ACA1_188010	join(<100740..100785,100856..101031,101120..101212,101299..101371,101454..101509,101657..101728,101814..101882,101944..102013,102083..102181,102255..102358,102464..102598,102869..103124,103217..103297,103392..103555,103653..103769,103893..104074,104228..>104315)	Acanthamoeba castellanii str. Neff	14916562
ACA1_188020	mRNA	ACA1_188020	NW_004457396.1	104457	106173	D	ACA1_188020	join(<104457..104487,104602..104669,104741..104869,104942..105063,105191..105419,105550..105720,105806..105923,106031..>106173)	Acanthamoeba castellanii str. Neff	14916563
ACA1_188030	mRNA	ACA1_188030	NW_004457396.1	106326	107772	R	ACA1_188030	complement(join(<106326..106482,106553..106688,106754..107147,107250..107323,107407..107617,107728..>107772))	Acanthamoeba castellanii str. Neff	14916564
ACA1_188040	mRNA	ACA1_188040	NW_004457396.1	107841	108167	R	ACA1_188040	complement(join(<107841..108075,108139..>108167))	Acanthamoeba castellanii str. Neff	14916565
ACA1_188050	mRNA	ACA1_188050	NW_004457396.1	108358	111325	R	ACA1_188050	complement(join(<108358..108363,108554..108638,108734..108807,108940..109040,109240..109391,109476..109612,109696..109963,110074..110198,110410..110502,111006..111111,111258..>111325))	Acanthamoeba castellanii str. Neff	14916566
ACA1_188160	mRNA	ACA1_188160	NW_004457396.1	111607	114774	R	ACA1_188160	complement(join(<111607..111654,111770..111840,111907..111974,112065..112122,112212..112302,112395..112514,112589..112687,112784..112858,112936..113038,113123..113197,113272..113664,113751..113866,113971..114118,114218..114315,114380..114496,114625..>114774))	Acanthamoeba castellanii str. Neff	14916567
ACA1_188170	mRNA	ACA1_188170	NW_004457396.1	114911	120362	D	ACA1_188170	join(<114911..114946,115224..115334,115416..115527,115682..115747,115845..115939,116020..116160,116287..116379,116488..116619,116701..116814,117147..117237,117330..117424,117493..117594,117675..117877,117971..118141,118268..118366,118441..118633,118708..118848,118981..119050,119152..119274,119418..119488,119567..119642,119744..119820,119962..120087,120189..>120362)	Acanthamoeba castellanii str. Neff	14916568
ACA1_188180	mRNA	ACA1_188180	NW_004457396.1	121017	122685	R	ACA1_188180	complement(join(<121017..121324,121413..121730,121878..121948,122059..122158,122240..122357,122405..122467,122635..>122685))	Acanthamoeba castellanii str. Neff	14916569
ACA1_188190	mRNA	ACA1_188190	NW_004457396.1	123063	123847	R	ACA1_188190	complement(join(<123063..123121,123220..123374,123454..123531,123641..123733,123801..>123847))	Acanthamoeba castellanii str. Neff	14916539
ACA1_188200	mRNA	ACA1_188200	NW_004457396.1	124197	125870	R	ACA1_188200	complement(join(<124197..124690,124942..125118,125187..125339,125450..125608,125675..>125870))	Acanthamoeba castellanii str. Neff	14916540
ACA1_188210	mRNA	ACA1_188210	NW_004457396.1	126099	126975	R	ACA1_188210	complement(join(<126099..126194,126281..126380,126461..126641,126741..>126975))	Acanthamoeba castellanii str. Neff	14916541
ACA1_188220	mRNA	ACA1_188220	NW_004457396.1	127110	128378	D	ACA1_188220	join(<127110..127226,127313..127507,127580..127690,127798..127969,128047..128170,128246..>128378)	Acanthamoeba castellanii str. Neff	14916542
ACA1_188230	mRNA	ACA1_188230	NW_004457396.1	128468	130382	R	ACA1_188230	complement(join(<128468..128593,128673..128870,128971..129078,129163..129682,129774..129867,129959..>130382))	Acanthamoeba castellanii str. Neff	14916543
ACA1_188240	mRNA	ACA1_188240	NW_004457396.1	130542	132237	D	ACA1_188240	join(<130542..130646,130718..130753,130931..130987,131078..131173,131257..131339,131448..131523,131628..131704,131788..131884,131970..132053,132121..>132237)	Acanthamoeba castellanii str. Neff	14916544
ACA1_188250	mRNA	ACA1_188250	NW_004457396.1	133023	136138	D	ACA1_188250	join(<133023..134834,135048..135137,135264..135370,135475..>136138)	Acanthamoeba castellanii str. Neff	14916545
ACA1_188260	mRNA	ACA1_188260	NW_004457396.1	136513	138537	D	ACA1_188260	join(<136513..136784,136955..137054,137206..137332,137428..137503,137603..137714,137859..138127,138297..138421,138515..>138537)	Acanthamoeba castellanii str. Neff	14916546
ACA1_188270	mRNA	ACA1_188270	NW_004457396.1	138754	140458	R	ACA1_188270	complement(join(<138754..138779,138892..139054,139148..139358,139444..139548,139646..139762,139905..139938,140023..140095,140171..140281,140396..>140458))	Acanthamoeba castellanii str. Neff	14916547
ACA1_188280	mRNA	ACA1_188280	NW_004457396.1	140572	144073	R	ACA1_188280	complement(join(<140572..140688,140840..140910,140990..141090,141167..141267,141335..141466,141591..141662,141759..141833,141928..141990,142067..142138,142233..142314,142376..142461,142540..142606,142678..142736,142817..142928,143008..143082,143150..143253,143477..143633,143750..143913,144044..>144073))	Acanthamoeba castellanii str. Neff	14916548
ACA1_188290	mRNA	ACA1_188290	NW_004457396.1	144484	147136	D	ACA1_188290	join(<144484..144855,144957..145518,145588..145665,145830..145960,146036..146175,146240..146346,146716..146825,146902..146999,147079..>147136)	Acanthamoeba castellanii str. Neff	14916549
ACA1_188310	mRNA	ACA1_188310	NW_004457396.1	150297	154512	R	ACA1_188310	complement(join(<150297..150365,150433..150606,150678..150844,150963..151099,151191..151303,151456..151607,151707..151827,151962..152033,152139..152528,152658..152725,152842..153298,153399..153486,153588..153661,153765..153944,154084..154203,154288..>154512))	Acanthamoeba castellanii str. Neff	14916551
ACA1_188320	mRNA	ACA1_188320	NW_004457396.1	155810	156994	R	ACA1_188320	complement(join(<155810..155959,156022..156092,156160..156308,156414..156529,156621..156720,156870..>156994))	Acanthamoeba castellanii str. Neff	14916552
ACA1_188330	mRNA	ACA1_188330	NW_004457396.1	157232	159884	D	ACA1_188330	join(<157232..158717,158784..159748,159852..>159884)	Acanthamoeba castellanii str. Neff	14916553
ACA1_188340	mRNA	ACA1_188340	NW_004457396.1	160313	161282	D	ACA1_188340	join(<160313..160354,160506..160712,160905..>161282)	Acanthamoeba castellanii str. Neff	14916554
ACA1_188350	mRNA	ACA1_188350	NW_004457396.1	162047	163783	D	ACA1_188350	join(<162047..162264,162409..>163783)	Acanthamoeba castellanii str. Neff	14916555
ACA1_188360	mRNA	ACA1_188360	NW_004457396.1	164168	164761	R	ACA1_188360	complement(<164168..>164761)	Acanthamoeba castellanii str. Neff	14916556
ACA1_188370	mRNA	ACA1_188370	NW_004457396.1	165587	167578	D	ACA1_188370	join(<165587..165864,165953..166201,166218..166478,166568..166814,166826..>167578)	Acanthamoeba castellanii str. Neff	14916515
ACA1_188380	mRNA	ACA1_188380	NW_004457396.1	168214	169716	R	ACA1_188380	complement(join(<168214..168440,168534..168626,168699..168783,168887..169015,169091..169215,169362..>169716))	Acanthamoeba castellanii str. Neff	14916516
ACA1_188490	mRNA	ACA1_188490	NW_004457396.1	170947	172333	R	ACA1_188490	complement(join(<170947..171135,171224..171466,171544..171852,172039..172090,172155..>172333))	Acanthamoeba castellanii str. Neff	14916517
ACA1_188500	mRNA	ACA1_188500	NW_004457396.1	172588	174631	D	ACA1_188500	join(<172588..172641,172711..172945,173026..173095,173202..173276,173369..173528,173799..173840,173946..174090,174181..174299,174376..174522,174590..>174631)	Acanthamoeba castellanii str. Neff	14916518
ACA1_188510	mRNA	ACA1_188510	NW_004457396.1	175172	180217	D	ACA1_188510	join(<175172..175180,175265..175351,175446..175566,175654..175769,175850..175910,175982..176232,176323..176485,176564..176709,176771..176890,177010..177121,177187..177282,177357..177433,177518..177600,177677..177755,177832..177960,178038..178095,178178..178422,178507..178645,178724..178834,178921..179058,179270..179737,179767..179933,180032..>180217)	Acanthamoeba castellanii str. Neff	14916519
ACA1_188520	mRNA	ACA1_188520	NW_004457396.1	180479	180592	R	ACA1_188520	complement(<180479..>180592)	Acanthamoeba castellanii str. Neff	14916520
ACA1_188530	mRNA	ACA1_188530	NW_004457396.1	180826	181838	R	ACA1_188530	complement(join(<180826..181001,181038..181193,181270..181507,181590..>181838))	Acanthamoeba castellanii str. Neff	14916521
ACA1_188540	mRNA	ACA1_188540	NW_004457396.1	182046	184055	R	ACA1_188540	complement(join(<182046..182212,182264..182426,182511..182615,182727..183158,183204..183245,183378..183455,183600..>184055))	Acanthamoeba castellanii str. Neff	14916522
ACA1_188550	mRNA	ACA1_188550	NW_004457396.1	185009	186345	R	ACA1_188550	complement(join(<185009..186059,186131..>186345))	Acanthamoeba castellanii str. Neff	14916523
ACA1_188560	mRNA	ACA1_188560	NW_004457396.1	187002	187280	D	ACA1_188560	<187002..>187280	Acanthamoeba castellanii str. Neff	14916524
ACA1_188570	mRNA	ACA1_188570	NW_004457396.1	187526	189054	D	ACA1_188570	join(<187526..187530,187598..187686,187770..187922,187984..188094,188187..188281,188329..188488,188576..188651,188730..188785,188879..>189054)	Acanthamoeba castellanii str. Neff	14916525
ACA1_188580	mRNA	ACA1_188580	NW_004457396.1	189284	190379	R	ACA1_188580	complement(join(<189284..189360,189429..189629,189703..190021,190055..190204,190290..>190379))	Acanthamoeba castellanii str. Neff	14916526
ACA1_188690	mRNA	ACA1_188690	NW_004457396.1	191741	192709	R	ACA1_188690	complement(join(<191741..192064,192141..192275,192288..192460,192538..>192709))	Acanthamoeba castellanii str. Neff	14916527
ACA1_188700	mRNA	ACA1_188700	NW_004457396.1	193162	194053	D	ACA1_188700	join(<193162..193283,193585..193721,193794..193857,193924..>194053)	Acanthamoeba castellanii str. Neff	14916528
ACA1_188710	mRNA	ACA1_188710	NW_004457396.1	195074	196756	D	ACA1_188710	join(<195074..195509,195762..195856,195966..196038,196106..196183,196266..>196756)	Acanthamoeba castellanii str. Neff	14916529
ACA1_188720	mRNA	ACA1_188720	NW_004457396.1	197727	198556	D	ACA1_188720	join(<197727..197780,197856..197974,198056..198137,198203..198309,198406..>198556)	Acanthamoeba castellanii str. Neff	14916530
ACA1_188730	mRNA	ACA1_188730	NW_004457396.1	199261	202055	D	ACA1_188730	join(<199261..199366,199416..199518,199605..199694,199761..199841,200026..200097,200208..200315,200380..200528,200655..200873,200999..201081,201153..201241,201325..201413,201507..201637,201798..201839,201939..>202055)	Acanthamoeba castellanii str. Neff	14916531
ACA1_188740	mRNA	ACA1_188740	NW_004457396.1	202724	207951	R	ACA1_188740	complement(join(<202724..203281,203377..203673,203749..203897,203982..204333,204429..204496,204583..204665,204703..205013,205038..205121,205214..205482,205542..205889,205961..206065,206144..206342,206411..206676,206763..206957,206997..207117,207201..207358,207473..207655,207900..>207951))	Acanthamoeba castellanii str. Neff	14916532
ACA1_188750	mRNA	ACA1_188750	NW_004457396.1	208820	211058	D	ACA1_188750	join(<208820..208855,209001..209109,209247..209332,209435..209568,209676..209797,209890..210008,210135..210259,210363..210588,210668..210768,210881..>211058)	Acanthamoeba castellanii str. Neff	14916533
ACA1_188760	mRNA	ACA1_188760	NW_004457396.1	211095	214012	R	ACA1_188760	complement(join(<211095..211232,211354..212126,212195..212850,212900..213074,213146..213564,213661..213778,213901..>214012))	Acanthamoeba castellanii str. Neff	14916534
ACA1_188870	mRNA	ACA1_188870	NW_004457396.1	216031	217536	R	ACA1_188870	complement(join(<216031..216302,216391..216508,216612..216832,217135..217241,217310..217367,217446..>217536))	Acanthamoeba castellanii str. Neff	14916535
ACA1_188980	mRNA	ACA1_188980	NW_004457396.1	218859	220712	D	ACA1_188980	join(<218859..219025,219109..219172,219283..219353,219698..219792,219869..219977,220029..220245,220323..220435,220526..>220712)	Acanthamoeba castellanii str. Neff	14916536
ACA1_189090	mRNA	ACA1_189090	NW_004457396.1	221033	224401	D	ACA1_189090	join(<221033..221075,221115..221221,221294..221392,221503..221685,221787..221930,222002..222150,222218..222277,222445..222508,222582..222724,222820..222999,223172..223220,223292..223485,223558..223735,223802..223949,224010..224167,224240..>224401)	Acanthamoeba castellanii str. Neff	14916537
ACA1_189200	mRNA	ACA1_189200	NW_004457396.1	225034	226218	D	ACA1_189200	join(<225034..225161,225236..225386,225448..225644,225715..225980,226052..>226218)	Acanthamoeba castellanii str. Neff	14916538
ACA1_007910	mRNA	ACA1_007910	NW_004457395.1	165	989	R	ACA1_007910	complement(<165..>989)	Acanthamoeba castellanii str. Neff	14916499
ACA1_078180	mRNA	ACA1_078180	NW_004457394.1	1667	4013	R	ACA1_078180	complement(join(<1667..1798,1826..2778,2849..>4013))	Acanthamoeba castellanii str. Neff	14916478
ACA1_078190	mRNA	ACA1_078190	NW_004457394.1	4200	4895	R	ACA1_078190	complement(join(<4200..4302,4456..>4895))	Acanthamoeba castellanii str. Neff	14916486
ACA1_078200	mRNA	ACA1_078200	NW_004457394.1	5168	6861	D	ACA1_078200	join(<5168..5399,5545..5641,5749..5870,5995..6071,6208..6287,6359..6451,6548..6617,6705..6735,6833..>6861)	Acanthamoeba castellanii str. Neff	14916495
ACA1_078210	mRNA	ACA1_078210	NW_004457394.1	7139	7456	D	ACA1_078210	<7139..>7456	Acanthamoeba castellanii str. Neff	14916496
ACA1_078220	mRNA	ACA1_078220	NW_004457394.1	7702	8793	R	ACA1_078220	complement(join(<7702..7801,8035..8120,8223..8378,8491..8598,8722..>8793))	Acanthamoeba castellanii str. Neff	14916497
ACA1_078330	mRNA	ACA1_078330	NW_004457394.1	13269	13427	D	ACA1_078330	<13269..>13427	Acanthamoeba castellanii str. Neff	14916498
ACA1_078340	mRNA	ACA1_078340	NW_004457394.1	15192	15866	D	ACA1_078340	join(<15192..15449,15657..>15866)	Acanthamoeba castellanii str. Neff	14916487
ACA1_078450	mRNA	ACA1_078450	NW_004457394.1	19417	21283	R	ACA1_078450	complement(join(<19417..20674,20765..20859,20999..21083,21159..>21283))	Acanthamoeba castellanii str. Neff	14916488
ACA1_078460	mRNA	ACA1_078460	NW_004457394.1	21888	27327	D	ACA1_078460	join(<21888..23273,23354..24470,24553..24677,24761..24919,25008..26992,27093..>27327)	Acanthamoeba castellanii str. Neff	14916489
ACA1_078470	mRNA	ACA1_078470	NW_004457394.1	27469	31359	R	ACA1_078470	complement(join(<27469..27631,27747..27831,27924..28037,28157..28262,28340..28447,28591..28893,29012..29313,29437..29565,29712..29829,29912..29991,30068..30206,30315..30424,30520..30958,31114..>31359))	Acanthamoeba castellanii str. Neff	14916490
ACA1_078480	mRNA	ACA1_078480	NW_004457394.1	31685	32837	R	ACA1_078480	complement(join(<31685..31763,31892..31993,32106..32354,32432..32782,32809..>32837))	Acanthamoeba castellanii str. Neff	14916491
ACA1_078490	mRNA	ACA1_078490	NW_004457394.1	33317	34641	R	ACA1_078490	complement(join(<33317..33343,33366..33435,33533..33648,33766..33873,33995..34137,34210..34308,34383..>34641))	Acanthamoeba castellanii str. Neff	14916492
ACA1_078500	mRNA	ACA1_078500	NW_004457394.1	34709	36289	D	ACA1_078500	join(<34709..34817,34971..35067,35161..35267,35415..35488,35642..35732,35801..35881,36002..36069,36236..>36289)	Acanthamoeba castellanii str. Neff	14916493
ACA1_078520	mRNA	ACA1_078520	NW_004457394.1	37576	38751	D	ACA1_078520	join(<37576..37974,38138..38302,38424..38528,38632..>38751)	Acanthamoeba castellanii str. Neff	14916479
ACA1_078530	mRNA	ACA1_078530	NW_004457394.1	38846	40003	D	ACA1_078530	join(<38846..39057,39143..39200,39266..39430,39583..39684,39890..>40003)	Acanthamoeba castellanii str. Neff	14916480
ACA1_078540	mRNA	ACA1_078540	NW_004457394.1	40365	43931	D	ACA1_078540	join(<40365..40506,40594..40707,40811..40957,41058..41158,41326..41553,41713..42057,42318..>43931)	Acanthamoeba castellanii str. Neff	14916481
ACA1_078560	mRNA	ACA1_078560	NW_004457394.1	45959	49723	R	ACA1_078560	complement(join(<45959..46056,46140..46241,46360..46445,46589..46723,46848..46879,47041..47127,47289..47362,47501..47597,47715..47783,47857..47944,48043..48171,48309..48454,48539..48643,48764..48887,48976..49086,49214..49377,49529..>49723))	Acanthamoeba castellanii str. Neff	14916483
ACA1_078570	mRNA	ACA1_078570	NW_004457394.1	49836	52223	D	ACA1_078570	join(<49836..49928,50018..50123,50206..50298,50394..50463,50557..50665,50810..50944,51020..51090,51209..51260,51340..51443,51542..51710,51814..51902,52007..>52223)	Acanthamoeba castellanii str. Neff	14916484
ACA1_078580	mRNA	ACA1_078580	NW_004457394.1	52220	55457	R	ACA1_078580	complement(join(<52220..52335,52426..52577,52674..52806,53109..53282,53402..53597,53718..53789,53857..53935,54004..54058,54204..54375,54463..54606,54684..54921,55019..55067,55173..55285,55363..>55457))	Acanthamoeba castellanii str. Neff	14916485
ACA1_078590	mRNA	ACA1_078590	NW_004457394.1	55576	56333	R	ACA1_078590	complement(join(<55576..55735,55821..55893,55979..56015,56092..56202,56292..>56333))	Acanthamoeba castellanii str. Neff	14916430
ACA1_078600	mRNA	ACA1_078600	NW_004457394.1	57029	64782	R	ACA1_078600	complement(join(<57029..57214,57284..57427,57534..57624,57764..57809,57899..57955,58055..58165,58262..58343,58545..58725,58819..58974,59063..59142,59218..59325,59455..59499,59747..59937,60066..60233,60347..60503,60661..60921,61014..61082,61173..61263,61543..61851,61946..62016,62123..62326,62420..62551,62700..62889,62971..63043,63129..63183,63509..63810,64319..64472,64609..64677,64738..>64782))	Acanthamoeba castellanii str. Neff	14916431
ACA1_078610	mRNA	ACA1_078610	NW_004457394.1	64952	67801	D	ACA1_078610	join(<64952..65773,65879..67189,67305..67456,67522..>67801)	Acanthamoeba castellanii str. Neff	14916432
ACA1_078620	mRNA	ACA1_078620	NW_004457394.1	68304	69994	D	ACA1_078620	join(<68304..68471,68655..68754,68840..68949,69042..69195,69346..69485,69577..69784,69864..>69994)	Acanthamoeba castellanii str. Neff	14916433
ACA1_078630	mRNA	ACA1_078630	NW_004457394.1	70258	70908	D	ACA1_078630	join(<70258..70743,70801..>70908)	Acanthamoeba castellanii str. Neff	14916434
ACA1_078640	mRNA	ACA1_078640	NW_004457394.1	70963	73047	D	ACA1_078640	join(<70963..72361,72506..72649,72730..72890,72958..>73047)	Acanthamoeba castellanii str. Neff	14916435
ACA1_078650	mRNA	ACA1_078650	NW_004457394.1	73137	74293	R	ACA1_078650	complement(join(<73137..73411,73543..73714,73896..73962,73974..>74293))	Acanthamoeba castellanii str. Neff	14916436
ACA1_078760	mRNA	ACA1_078760	NW_004457394.1	75609	76335	R	ACA1_078760	complement(join(<75609..75632,75807..76104,76238..>76335))	Acanthamoeba castellanii str. Neff	14916437
ACA1_078870	mRNA	ACA1_078870	NW_004457394.1	76460	77967	R	ACA1_078870	complement(join(<76460..76623,76708..76810,76908..77054,77142..77197,77318..77400,77556..77709,77813..77878,77958..>77967))	Acanthamoeba castellanii str. Neff	14916438
ACA1_078890	mRNA	ACA1_078890	NW_004457394.1	85237	90502	D	ACA1_078890	join(<85237..85470,85613..85714,86007..86422,86507..86583,86677..86827,87024..87247,87408..87520,87623..89753,89883..>90502)	Acanthamoeba castellanii str. Neff	14916466
ACA1_078910	mRNA	ACA1_078910	NW_004457394.1	92765	94987	R	ACA1_078910	complement(join(<92765..94405,94484..94605,94729..>94987))	Acanthamoeba castellanii str. Neff	14916468
ACA1_078920	mRNA	ACA1_078920	NW_004457394.1	95282	96440	D	ACA1_078920	join(<95282..95383,95715..>96440)	Acanthamoeba castellanii str. Neff	14916469
ACA1_078930	mRNA	ACA1_078930	NW_004457394.1	97748	101370	R	ACA1_078930	complement(join(<97748..97902,98061..98158,98312..98458,98551..99871,99893..99947,99962..100091,100190..100329,100479..100630,100711..100820,100952..101036,101100..>101370))	Acanthamoeba castellanii str. Neff	14916470
ACA1_078940	mRNA	ACA1_078940	NW_004457394.1	105417	106314	R	ACA1_078940	complement(join(<105417..105584,105740..105860,106241..>106314))	Acanthamoeba castellanii str. Neff	14916471
ACA1_078950	mRNA	ACA1_078950	NW_004457394.1	106862	112997	R	ACA1_078950	complement(join(<106862..107453,107547..107681,107792..108005,108079..108184,108308..108418,108543..108925,109010..109444,109595..109671,109765..109818,109910..110038,110126..110238,110320..110401,110532..110923,111062..111174,111428..111602,111676..111794,111956..112100,112202..112362,112655..>112997))	Acanthamoeba castellanii str. Neff	14916472
ACA1_078960	mRNA	ACA1_078960	NW_004457394.1	113160	114153	D	ACA1_078960	join(<113160..113214,113333..113456,113558..113640,113710..113843,113947..>114153)	Acanthamoeba castellanii str. Neff	14916473
ACA1_078970	mRNA	ACA1_078970	NW_004457394.1	114282	117231	R	ACA1_078970	complement(join(<114282..116205,116328..116423,116495..116554,116636..116733,116865..116933,117046..117147,117211..>117231))	Acanthamoeba castellanii str. Neff	14916474
ACA1_078980	mRNA	ACA1_078980	NW_004457394.1	117965	120314	R	ACA1_078980	complement(join(<117965..118189,118297..118592,118774..119051,119145..119370,120021..120054,120201..>120314))	Acanthamoeba castellanii str. Neff	14916475
ACA1_078990	mRNA	ACA1_078990	NW_004457394.1	122558	126453	R	ACA1_078990	complement(join(<122558..122611,122680..122865,122955..123102,123191..123319,123404..123498,123576..123723,123818..123952,124045..124127,124232..124321,124418..124533,124615..124678,124829..124918,125007..125138,125242..125424,125540..125681,125772..125843,125974..126052,126124..126197,126431..>126453))	Acanthamoeba castellanii str. Neff	14916476
ACA1_079000	mRNA	ACA1_079000	NW_004457394.1	127876	129079	R	ACA1_079000	complement(join(<127876..128512,128580..>129079))	Acanthamoeba castellanii str. Neff	14916477
ACA1_079010	mRNA	ACA1_079010	NW_004457394.1	131174	132828	R	ACA1_079010	complement(join(<131174..131301,131418..131592,131704..131848,131939..132010,132106..132212,132335..132357,132438..132530,132594..132641,132723..>132828))	Acanthamoeba castellanii str. Neff	14916440
ACA1_079020	mRNA	ACA1_079020	NW_004457394.1	133204	137629	D	ACA1_079020	join(<133204..133375,133496..133601,133700..133797,133877..133946,134038..134123,134219..134304,134377..134459,134544..134667,134776..134961,135036..135242,135323..135568,135639..135735,135802..135932,136003..136181,136269..136452,136568..136676,136758..136860,136937..137090,137198..>137629)	Acanthamoeba castellanii str. Neff	14916441
ACA1_079030	mRNA	ACA1_079030	NW_004457394.1	137799	139184	D	ACA1_079030	join(<137799..138025,138175..138307,138413..138512,138644..138759,138855..>139184)	Acanthamoeba castellanii str. Neff	14916442
ACA1_079040	mRNA	ACA1_079040	NW_004457394.1	139584	140174	R	ACA1_079040	complement(join(<139584..139699,139745..>140174))	Acanthamoeba castellanii str. Neff	14916443
ACA1_079150	mRNA	ACA1_079150	NW_004457394.1	143290	144764	R	ACA1_079150	complement(join(<143290..143881,143968..144444,144616..>144764))	Acanthamoeba castellanii str. Neff	14916444
ACA1_079160	mRNA	ACA1_079160	NW_004457394.1	144824	145576	R	ACA1_079160	complement(join(<144824..145120,145136..>145576))	Acanthamoeba castellanii str. Neff	14916445
ACA1_079170	mRNA	ACA1_079170	NW_004457394.1	145776	147173	R	ACA1_079170	complement(join(<145776..146750,146856..>147173))	Acanthamoeba castellanii str. Neff	14916446
ACA1_079180	mRNA	ACA1_079180	NW_004457394.1	148095	148366	D	ACA1_079180	join(<148095..148188,148203..>148366)	Acanthamoeba castellanii str. Neff	14916447
ACA1_079190	mRNA	ACA1_079190	NW_004457394.1	148551	149304	D	ACA1_079190	join(<148551..148976,148996..>149304)	Acanthamoeba castellanii str. Neff	14916448
ACA1_079200	mRNA	ACA1_079200	NW_004457394.1	149404	151204	D	ACA1_079200	join(<149404..149802,149960..>151204)	Acanthamoeba castellanii str. Neff	14916449
ACA1_079220	mRNA	ACA1_079220	NW_004457394.1	151658	152287	D	ACA1_079220	<151658..>152287	Acanthamoeba castellanii str. Neff	14916451
ACA1_079250	mRNA	ACA1_079250	NW_004457394.1	154739	155033	D	ACA1_079250	join(<154739..154958,154972..>155033)	Acanthamoeba castellanii str. Neff	14916454
ACA1_079270	mRNA	ACA1_079270	NW_004457394.1	155677	156168	D	ACA1_079270	<155677..>156168	Acanthamoeba castellanii str. Neff	14916456
ACA1_079280	mRNA	ACA1_079280	NW_004457394.1	156146	156619	R	ACA1_079280	complement(join(<156146..156296,156334..156557,156590..>156619))	Acanthamoeba castellanii str. Neff	14916457
ACA1_079290	mRNA	ACA1_079290	NW_004457394.1	156728	157122	R	ACA1_079290	complement(join(<156728..156943,156994..>157122))	Acanthamoeba castellanii str. Neff	14916458
ACA1_079300	mRNA	ACA1_079300	NW_004457394.1	157175	158020	R	ACA1_079300	complement(<157175..>158020)	Acanthamoeba castellanii str. Neff	14916459
ACA1_079320	mRNA	ACA1_079320	NW_004457394.1	159561	159877	R	ACA1_079320	complement(join(<159561..159734,159788..>159877))	Acanthamoeba castellanii str. Neff	14916461
ACA1_079330	mRNA	ACA1_079330	NW_004457394.1	160262	161526	D	ACA1_079330	join(<160262..160305,160432..160511,160656..160762,160828..161386,161504..>161526)	Acanthamoeba castellanii str. Neff	14916462
ACA1_079340	mRNA	ACA1_079340	NW_004457394.1	162030	163137	R	ACA1_079340	complement(join(<162030..162041,162248..163015,163027..>163137))	Acanthamoeba castellanii str. Neff	14916463
ACA1_079450	mRNA	ACA1_079450	NW_004457394.1	164492	164962	D	ACA1_079450	join(<164492..164594,164670..164808,164878..>164962)	Acanthamoeba castellanii str. Neff	14916464
ACA1_079460	mRNA	ACA1_079460	NW_004457394.1	166661	167131	D	ACA1_079460	join(<166661..166760,166854..>167131)	Acanthamoeba castellanii str. Neff	14916465
ACA1_005320	mRNA	ACA1_005320	NW_004457393.1	949	4498	D	ACA1_005320	join(<949..984,1186..1356,1445..1579,1696..1778,1895..1952,2009..2093,2165..2274,2528..2633,2705..2778,2878..2957,3034..3128,3205..3276,3342..3403,3484..3613,3686..3795,3908..3982,4054..4098,4204..4272,4376..>4498)	Acanthamoeba castellanii str. Neff	14916428
ACA1_005430	mRNA	ACA1_005430	NW_004457393.1	6968	7896	D	ACA1_005430	join(<6968..7683,7800..>7896)	Acanthamoeba castellanii str. Neff	14916429
ACA1_311340	mRNA	ACA1_311340	NW_004457392.1	15	2020	R	ACA1_311340	complement(join(<15..152,234..352,457..517,969..1043,1157..1277,1348..1415,1796..1876,1907..>2020))	Acanthamoeba castellanii str. Neff	14916427
ACA1_311650	mRNA	ACA1_311650	NW_004457392.1	2791	3146	R	ACA1_311650	complement(join(<2791..2918,2993..>3146))	Acanthamoeba castellanii str. Neff	14916423
ACA1_311760	mRNA	ACA1_311760	NW_004457392.1	4237	7706	R	ACA1_311760	complement(join(<4237..4264,4342..4536,4606..5131,5617..5778,5849..5936,6011..6156,6250..6310,6376..6509,6539..6618,6690..6795,7096..7206,7286..7444,7465..7585,7665..>7706))	Acanthamoeba castellanii str. Neff	14916424
ACA1_311970	mRNA	ACA1_311970	NW_004457392.1	8332	9068	D	ACA1_311970	join(<8332..8379,8444..8513,8602..8681,8769..8829,8914..>9068)	Acanthamoeba castellanii str. Neff	14916426
ACA1_312180	mRNA	ACA1_312180	NW_004457392.1	13280	14760	R	ACA1_312180	complement(join(<13280..13456,13991..14136,14241..14304,14420..14569,14656..>14760))	Acanthamoeba castellanii str. Neff	14916425
ACA1_377210	mRNA	ACA1_377210	NW_004457391.1	567	2362	R	ACA1_377210	complement(join(<567..752,837..989,1082..>2362))	Acanthamoeba castellanii str. Neff	14916376
ACA1_377220	mRNA	ACA1_377220	NW_004457391.1	4513	4929	R	ACA1_377220	complement(join(<4513..4631,4803..>4929))	Acanthamoeba castellanii str. Neff	14916314
ACA1_377230	mRNA	ACA1_377230	NW_004457391.1	8311	9903	D	ACA1_377230	join(<8311..8409,8559..9093,9160..9547,9659..9743,9880..>9903)	Acanthamoeba castellanii str. Neff	14916319
ACA1_377240	mRNA	ACA1_377240	NW_004457391.1	11288	11757	R	ACA1_377240	complement(join(<11288..11382,11451..11616,11683..>11757))	Acanthamoeba castellanii str. Neff	14916320
ACA1_377250	mRNA	ACA1_377250	NW_004457391.1	11858	12133	R	ACA1_377250	complement(<11858..>12133)	Acanthamoeba castellanii str. Neff	14916315
ACA1_377260	mRNA	ACA1_377260	NW_004457391.1	13432	17503	D	ACA1_377260	join(<13432..13446,13559..13734,13851..13976,14044..14717,14852..14933,15009..15077,15159..15312,15370..15507,15573..15650,15740..15831,15903..16000,16046..16093,16169..16596,16700..17023,17093..>17503)	Acanthamoeba castellanii str. Neff	14916316
ACA1_377270	mRNA	ACA1_377270	NW_004457391.1	17627	20021	D	ACA1_377270	join(<17627..17648,17764..17933,18024..18204,18276..18337,18460..18570,18688..18838,18926..19045,19191..19256,19277..19319,19334..19449,19566..19799,19906..>20021)	Acanthamoeba castellanii str. Neff	14916317
ACA1_377280	mRNA	ACA1_377280	NW_004457391.1	20349	20783	D	ACA1_377280	<20349..>20783	Acanthamoeba castellanii str. Neff	14916318
ACA1_377290	mRNA	ACA1_377290	NW_004457391.1	21208	21780	D	ACA1_377290	join(<21208..21249,21478..>21780)	Acanthamoeba castellanii str. Neff	14916377
ACA1_377300	mRNA	ACA1_377300	NW_004457391.1	21999	22466	D	ACA1_377300	<21999..>22466	Acanthamoeba castellanii str. Neff	14916378
ACA1_377310	mRNA	ACA1_377310	NW_004457391.1	22515	24800	R	ACA1_377310	complement(join(<22515..22687,22778..22899,22985..23030,23258..23412,23499..23670,23776..23877,23966..24100,24198..24280,24379..24461,24567..>24800))	Acanthamoeba castellanii str. Neff	14916379
ACA1_377320	mRNA	ACA1_377320	NW_004457391.1	25381	27375	D	ACA1_377320	join(<25381..25425,25505..25648,25717..25813,25955..26089,26163..26297,26387..26463,26540..26658,26694..26703,26738..26867,26948..27033,27102..27201,27317..>27375)	Acanthamoeba castellanii str. Neff	14916380
ACA1_377330	mRNA	ACA1_377330	NW_004457391.1	28172	30229	D	ACA1_377330	<28172..>30229	Acanthamoeba castellanii str. Neff	14916381
ACA1_377340	mRNA	ACA1_377340	NW_004457391.1	30264	35576	D	ACA1_377340	join(<30264..30287,30380..30508,30606..30716,30815..30952,31055..31240,31349..31405,31503..31599,31688..31846,31920..32168,32267..32379,32444..32615,32655..32720,32822..33409,33564..33610,33710..33824,33927..34091,34165..34304,34393..34475,34597..34669,34748..34982,35062..35156,35238..35348,35424..>35576)	Acanthamoeba castellanii str. Neff	14916382
ACA1_377350	mRNA	ACA1_377350	NW_004457391.1	36098	42260	D	ACA1_377350	join(<36098..36428,36567..36728,36833..37081,37197..37551,37666..37778,37856..37917,38237..38299,38388..38454,38776..39281,39350..40110,40121..40402,40494..40749,40901..40994,41076..41136,41243..41358,41464..41702,41799..>42260)	Acanthamoeba castellanii str. Neff	14916383
ACA1_377360	mRNA	ACA1_377360	NW_004457391.1	42447	43598	R	ACA1_377360	complement(<42447..>43598)	Acanthamoeba castellanii str. Neff	14916384
ACA1_377370	mRNA	ACA1_377370	NW_004457391.1	43954	46277	R	ACA1_377370	complement(join(<43954..44220,44288..44427,44537..44622,44776..44813,44933..45007,45104..45212,45339..45420,45529..45724,45818..45874,46074..>46277))	Acanthamoeba castellanii str. Neff	14916385
ACA1_377380	mRNA	ACA1_377380	NW_004457391.1	46736	47702	D	ACA1_377380	join(<46736..46844,46910..47072,47164..47368,47433..>47702)	Acanthamoeba castellanii str. Neff	14916386
ACA1_377390	mRNA	ACA1_377390	NW_004457391.1	47839	51302	R	ACA1_377390	complement(join(<47839..47987,48086..48271,48394..48541,48669..48790,48871..49101,49175..49271,49350..49460,49563..49650,49761..49858,49936..50113,50201..50282,50375..50464,50551..50584,50669..50805,50911..51058,51186..>51302))	Acanthamoeba castellanii str. Neff	14916301
ACA1_377400	mRNA	ACA1_377400	NW_004457391.1	51550	53992	D	ACA1_377400	join(<51550..51640,51841..52008,52212..52324,52426..52771,52923..53072,53136..53297,53550..53643,53848..>53992)	Acanthamoeba castellanii str. Neff	14916302
ACA1_377410	mRNA	ACA1_377410	NW_004457391.1	54189	60294	R	ACA1_377410	complement(join(<54189..54349,54472..54590,54689..54937,55032..55186,55274..55377,55464..55565,55666..55835,55915..56033,56170..56283,56385..56528,56596..56805,56935..57097,57166..57249,57336..57479,57581..57705,57780..58010,58082..58345,58418..58567,58651..58781,58870..58984,59073..59177,59283..59412,59520..59620,59727..59917,59989..60046,60190..>60294))	Acanthamoeba castellanii str. Neff	14916303
ACA1_377420	mRNA	ACA1_377420	NW_004457391.1	60379	61998	R	ACA1_377420	complement(join(<60379..60629,60712..60906,61001..61152,61235..61311,61496..61585,61785..61880,61960..>61998))	Acanthamoeba castellanii str. Neff	14916304
ACA1_377430	mRNA	ACA1_377430	NW_004457391.1	62093	63961	D	ACA1_377430	join(<62093..62727,62791..62860,62943..63028,63112..63235,63324..63446,63542..>63961)	Acanthamoeba castellanii str. Neff	14916305
ACA1_377440	mRNA	ACA1_377440	NW_004457391.1	64559	66072	D	ACA1_377440	join(<64559..65219,65249..>66072)	Acanthamoeba castellanii str. Neff	14916306
ACA1_377450	mRNA	ACA1_377450	NW_004457391.1	66255	69116	D	ACA1_377450	join(<66255..66558,66662..66831,66936..66989,67066..67139,67223..67340,67416..67556,67624..67699,67764..67861,67944..68055,68149..68233,68304..68675,68747..>69116)	Acanthamoeba castellanii str. Neff	14916307
ACA1_377460	mRNA	ACA1_377460	NW_004457391.1	69230	69592	D	ACA1_377460	<69230..>69592	Acanthamoeba castellanii str. Neff	14916308
ACA1_377470	mRNA	ACA1_377470	NW_004457391.1	69729	71247	D	ACA1_377470	join(<69729..70715,70786..>71247)	Acanthamoeba castellanii str. Neff	14916309
ACA1_377480	mRNA	ACA1_377480	NW_004457391.1	71391	71729	D	ACA1_377480	<71391..>71729	Acanthamoeba castellanii str. Neff	14916310
ACA1_377490	mRNA	ACA1_377490	NW_004457391.1	72068	74592	D	ACA1_377490	join(<72068..72287,72302..72394,72482..72720,72788..72877,72959..73098,73202..73322,73439..73858,73913..74015,74139..74242,74335..>74592)	Acanthamoeba castellanii str. Neff	14916311
ACA1_377500	mRNA	ACA1_377500	NW_004457391.1	74672	77687	D	ACA1_377500	join(<74672..75320,75444..75616,75696..75890,75964..76083,76179..76302,76395..76511,76599..76640,76706..76779,76924..76982,77058..77169,77248..77350,77476..>77687)	Acanthamoeba castellanii str. Neff	14916312
ACA1_377510	mRNA	ACA1_377510	NW_004457391.1	78082	78541	D	ACA1_377510	join(<78082..78142,78207..>78541)	Acanthamoeba castellanii str. Neff	14916313
ACA1_377520	mRNA	ACA1_377520	NW_004457391.1	78657	81817	R	ACA1_377520	complement(join(<78657..78770,78885..78987,79141..79267,79387..79533,79623..79694,79786..79888,79980..80048,80119..80186,80304..80395,80493..80562,80684..80752,80855..80985,81648..>81817))	Acanthamoeba castellanii str. Neff	14916262
ACA1_377530	mRNA	ACA1_377530	NW_004457391.1	82022	85097	R	ACA1_377530	complement(join(<82022..82582,82760..82993,83114..83248,83349..83512,83617..83819,83888..84039,84117..84360,84469..84681,84742..84868,84977..>85097))	Acanthamoeba castellanii str. Neff	14916263
ACA1_377540	mRNA	ACA1_377540	NW_004457391.1	85699	88624	R	ACA1_377540	complement(join(<85699..85850,85993..86331,86432..86584,86676..87032,87193..87442,87702..87785,87884..88119,88226..88394,88499..>88624))	Acanthamoeba castellanii str. Neff	14916264
ACA1_377550	mRNA	ACA1_377550	NW_004457391.1	89151	89682	R	ACA1_377550	complement(join(<89151..89167,89288..89456,89557..>89682))	Acanthamoeba castellanii str. Neff	14916265
ACA1_377560	mRNA	ACA1_377560	NW_004457391.1	90328	90477	D	ACA1_377560	<90328..>90477	Acanthamoeba castellanii str. Neff	14916266
ACA1_377670	mRNA	ACA1_377670	NW_004457391.1	92017	92951	R	ACA1_377670	complement(join(<92017..92798,92891..>92951))	Acanthamoeba castellanii str. Neff	14916267
ACA1_377690	mRNA	ACA1_377690	NW_004457391.1	103349	104283	D	ACA1_377690	join(<103349..103417,103490..103645,103708..103799,103887..104023,104099..>104283)	Acanthamoeba castellanii str. Neff	14916269
ACA1_377700	mRNA	ACA1_377700	NW_004457391.1	104741	107342	D	ACA1_377700	join(<104741..104887,105029..105097,105248..105372,105464..105533,105698..105765,105891..106026,106104..106180,106270..106378,106444..106542,106704..106836,107242..>107342)	Acanthamoeba castellanii str. Neff	14916270
ACA1_377710	mRNA	ACA1_377710	NW_004457391.1	107474	110043	R	ACA1_377710	complement(join(<107474..107535,107601..107687,107761..107840,107940..108049,108177..108310,108394..108519,108594..108746,108847..109014,109104..>110043))	Acanthamoeba castellanii str. Neff	14916271
ACA1_377720	mRNA	ACA1_377720	NW_004457391.1	110338	111856	R	ACA1_377720	complement(join(<110338..110718,110846..111552,111679..>111856))	Acanthamoeba castellanii str. Neff	14916272
ACA1_377730	mRNA	ACA1_377730	NW_004457391.1	112514	112914	D	ACA1_377730	join(<112514..112555,112645..>112914)	Acanthamoeba castellanii str. Neff	14916273
ACA1_377740	mRNA	ACA1_377740	NW_004457391.1	113250	114129	R	ACA1_377740	complement(join(<113250..113340,113441..113567,113662..113771,113875..113893,113985..>114129))	Acanthamoeba castellanii str. Neff	14916274
ACA1_377750	mRNA	ACA1_377750	NW_004457391.1	114398	114754	R	ACA1_377750	complement(<114398..>114754)	Acanthamoeba castellanii str. Neff	14916275
ACA1_377760	mRNA	ACA1_377760	NW_004457391.1	115171	115722	R	ACA1_377760	complement(join(<115171..115227,115329..115494,115567..115612,115677..>115722))	Acanthamoeba castellanii str. Neff	14916276
ACA1_377770	mRNA	ACA1_377770	NW_004457391.1	115992	117451	D	ACA1_377770	join(<115992..116156,116303..116415,116531..116675,116768..116955,117041..117122,117188..117248,117342..>117451)	Acanthamoeba castellanii str. Neff	14916277
ACA1_377780	mRNA	ACA1_377780	NW_004457391.1	117686	118389	R	ACA1_377780	complement(join(<117686..117888,117966..>118389))	Acanthamoeba castellanii str. Neff	14916278
ACA1_377790	mRNA	ACA1_377790	NW_004457391.1	119163	121232	D	ACA1_377790	join(<119163..119349,119418..119554,119707..119779,119841..120019,120100..120197,120273..120386,120465..120533,120614..120704,120773..120826,120962..121104,121205..>121232)	Acanthamoeba castellanii str. Neff	14916279
ACA1_377800	mRNA	ACA1_377800	NW_004457391.1	121494	123769	D	ACA1_377800	join(<121494..121633,121720..121807,121867..121944,122015..122115,122201..122325,122343..122454,122531..122764,122831..122906,123002..123196,123329..>123769)	Acanthamoeba castellanii str. Neff	14916321
ACA1_377810	mRNA	ACA1_377810	NW_004457391.1	124124	124965	D	ACA1_377810	join(<124124..124322,124400..>124965)	Acanthamoeba castellanii str. Neff	14916322
ACA1_377820	mRNA	ACA1_377820	NW_004457391.1	125281	126231	D	ACA1_377820	join(<125281..125488,125594..>126231)	Acanthamoeba castellanii str. Neff	14916323
ACA1_377830	mRNA	ACA1_377830	NW_004457391.1	126527	127837	D	ACA1_377830	join(<126527..126636,126652..126742,126847..127015,127082..127178,127254..127452,127470..127633,127669..>127837)	Acanthamoeba castellanii str. Neff	14916324
ACA1_377840	mRNA	ACA1_377840	NW_004457391.1	127855	128864	R	ACA1_377840	complement(join(<127855..128208,128318..128586,128684..>128864))	Acanthamoeba castellanii str. Neff	14916325
ACA1_377850	mRNA	ACA1_377850	NW_004457391.1	129075	129654	R	ACA1_377850	complement(join(<129075..129209,129281..129361,129451..129514,129575..>129654))	Acanthamoeba castellanii str. Neff	14916326
ACA1_377860	mRNA	ACA1_377860	NW_004457391.1	130266	131217	R	ACA1_377860	complement(join(<130266..130442,130578..130832,130903..130947,131059..>131217))	Acanthamoeba castellanii str. Neff	14916327
ACA1_377870	mRNA	ACA1_377870	NW_004457391.1	131343	133947	R	ACA1_377870	complement(join(<131343..131558,131638..131778,131869..131955,132046..132180,132300..132386,132493..132582,132736..133069,133123..133378,133468..133612,133804..>133947))	Acanthamoeba castellanii str. Neff	14916328
ACA1_377880	mRNA	ACA1_377880	NW_004457391.1	134030	134571	R	ACA1_377880	complement(join(<134030..134461,134548..>134571))	Acanthamoeba castellanii str. Neff	14916329
ACA1_377890	mRNA	ACA1_377890	NW_004457391.1	134957	135610	D	ACA1_377890	<134957..>135610	Acanthamoeba castellanii str. Neff	14916330
ACA1_377910	mRNA	ACA1_377910	NW_004457391.1	140388	144563	R	ACA1_377910	complement(join(<140388..140616,140718..140886,140987..141265,141399..141483,141584..141762,141862..142069,142224..142304,142387..142488,142599..142690,142780..142878,142989..143053,143123..143169,143241..143349,143474..143623,143701..143804,143950..144161,144281..>144563))	Acanthamoeba castellanii str. Neff	14916332
ACA1_377920	mRNA	ACA1_377920	NW_004457391.1	144630	145253	R	ACA1_377920	complement(join(<144630..144831,144946..>145253))	Acanthamoeba castellanii str. Neff	14916333
ACA1_377930	mRNA	ACA1_377930	NW_004457391.1	145941	147824	R	ACA1_377930	complement(join(<145941..146068,146162..146238,146346..146439,146595..146766,146879..146966,147053..147137,147235..147294,147368..>147824))	Acanthamoeba castellanii str. Neff	14916334
ACA1_377940	mRNA	ACA1_377940	NW_004457391.1	148213	149579	D	ACA1_377940	join(<148213..148636,148753..149040,149113..>149579)	Acanthamoeba castellanii str. Neff	14916335
ACA1_377950	mRNA	ACA1_377950	NW_004457391.1	149616	151758	R	ACA1_377950	complement(join(<149616..149747,149820..150200,150329..150463,150541..150654,150777..150914,151027..151509,151522..151613,151737..>151758))	Acanthamoeba castellanii str. Neff	14916336
ACA1_377960	mRNA	ACA1_377960	NW_004457391.1	152045	154166	D	ACA1_377960	join(<152045..152486,152643..152741,152864..152907,152982..153051,153114..153634,153718..153848,153910..154012,154098..>154166)	Acanthamoeba castellanii str. Neff	14916337
ACA1_377970	mRNA	ACA1_377970	NW_004457391.1	154374	154645	R	ACA1_377970	complement(join(<154374..154448,154511..>154645))	Acanthamoeba castellanii str. Neff	14916338
ACA1_377980	mRNA	ACA1_377980	NW_004457391.1	155270	157507	D	ACA1_377980	join(<155270..155308,155512..155687,155766..155850,155931..156069,156159..156274,156356..156503,156594..156787,156934..157151,157444..>157507)	Acanthamoeba castellanii str. Neff	14916357
ACA1_377990	mRNA	ACA1_377990	NW_004457391.1	157943	159354	R	ACA1_377990	complement(join(<157943..158776,158797..>159354))	Acanthamoeba castellanii str. Neff	14916358
ACA1_378000	mRNA	ACA1_378000	NW_004457391.1	160617	162540	D	ACA1_378000	join(<160617..161421,161503..162073,162201..>162540)	Acanthamoeba castellanii str. Neff	14916359
ACA1_378010	mRNA	ACA1_378010	NW_004457391.1	162713	165122	D	ACA1_378010	join(<162713..163036,163123..163311,163381..163514,163604..163722,163848..163991,164066..164114,164213..164303,164421..164768,164863..164964,165036..>165122)	Acanthamoeba castellanii str. Neff	14916360
ACA1_378030	mRNA	ACA1_378030	NW_004457391.1	168932	170736	R	ACA1_378030	complement(join(<168932..168950,169003..169249,169360..169768,169865..170011,170106..170228,170311..170475,170653..>170736))	Acanthamoeba castellanii str. Neff	14916362
ACA1_378040	mRNA	ACA1_378040	NW_004457391.1	171628	179225	R	ACA1_378040	complement(join(<171628..171690,171782..171949,172026..172153,172251..172405,172515..172630,172793..173094,173178..173405,173502..173707,173830..174020,174093..174233,174270..174316,174412..174686,174778..175243,175359..176367,176474..176616,176695..176761,176852..176954,177025..177186,177288..177414,177493..177606,177742..177897,178015..178098,178211..178313,178421..178489,178617..178892,179009..179084,179185..>179225))	Acanthamoeba castellanii str. Neff	14916363
ACA1_378060	mRNA	ACA1_378060	NW_004457391.1	182315	182470	R	ACA1_378060	complement(<182315..>182470)	Acanthamoeba castellanii str. Neff	14916365
ACA1_378070	mRNA	ACA1_378070	NW_004457391.1	183606	185054	D	ACA1_378070	<183606..>185054	Acanthamoeba castellanii str. Neff	14916366
ACA1_378080	mRNA	ACA1_378080	NW_004457391.1	185377	185912	R	ACA1_378080	complement(join(<185377..185389,185467..185698,185759..>185912))	Acanthamoeba castellanii str. Neff	14916367
ACA1_378090	mRNA	ACA1_378090	NW_004457391.1	186816	187756	D	ACA1_378090	join(<186816..187089,187162..187476,187548..>187756)	Acanthamoeba castellanii str. Neff	14916368
ACA1_378100	mRNA	ACA1_378100	NW_004457391.1	189022	189309	R	ACA1_378100	complement(join(<189022..189066,189103..>189309))	Acanthamoeba castellanii str. Neff	14916369
ACA1_378110	mRNA	ACA1_378110	NW_004457391.1	189695	190833	D	ACA1_378110	join(<189695..189736,189810..189895,189977..190158,190292..190720,190808..>190833)	Acanthamoeba castellanii str. Neff	14916370
ACA1_378120	mRNA	ACA1_378120	NW_004457391.1	191107	192067	R	ACA1_378120	complement(join(<191107..191225,191389..>192067))	Acanthamoeba castellanii str. Neff	14916371
ACA1_378130	mRNA	ACA1_378130	NW_004457391.1	192508	194469	R	ACA1_378130	complement(join(<192508..192570,192663..193436,193555..193641,193791..193827,193874..>194469))	Acanthamoeba castellanii str. Neff	14916372
ACA1_378140	mRNA	ACA1_378140	NW_004457391.1	195144	196246	R	ACA1_378140	complement(join(<195144..195167,195248..195294,195364..195501,195593..195724,195808..>196246))	Acanthamoeba castellanii str. Neff	14916373
ACA1_378150	mRNA	ACA1_378150	NW_004457391.1	197063	198350	R	ACA1_378150	complement(join(<197063..197265,197366..197500,197588..197706,197865..198155,198253..>198350))	Acanthamoeba castellanii str. Neff	14916374
ACA1_378160	mRNA	ACA1_378160	NW_004457391.1	198765	200011	R	ACA1_378160	complement(join(<198765..198863,198948..199213,199323..199411,199556..199652,199768..199870,199940..>200011))	Acanthamoeba castellanii str. Neff	14916375
ACA1_378170	mRNA	ACA1_378170	NW_004457391.1	200177	201921	R	ACA1_378170	complement(join(<200177..200289,200418..200475,200564..200681,200767..200905,200990..201115,201177..201285,201380..201471,201559..201625,201745..>201921))	Acanthamoeba castellanii str. Neff	14916339
ACA1_378180	mRNA	ACA1_378180	NW_004457391.1	202203	204908	R	ACA1_378180	complement(join(<202203..202549,202620..202766,202870..203021,203104..203191,203261..203342,203438..203575,203663..203777,203944..>204908))	Acanthamoeba castellanii str. Neff	14916340
ACA1_378190	mRNA	ACA1_378190	NW_004457391.1	205340	206648	R	ACA1_378190	complement(join(<205340..205376,205456..206122,206205..206369,206469..206560,206632..>206648))	Acanthamoeba castellanii str. Neff	14916341
ACA1_378200	mRNA	ACA1_378200	NW_004457391.1	207695	210735	R	ACA1_378200	complement(join(<207695..207728,207838..207904,207991..208392,208527..208687,208768..208971,209086..209237,209381..209444,209525..209663,209723..209785,209895..209985,210058..210173,210258..210326,210432..>210735))	Acanthamoeba castellanii str. Neff	14916342
ACA1_378210	mRNA	ACA1_378210	NW_004457391.1	210960	214277	R	ACA1_378210	complement(join(<210960..211043,211145..211227,211485..211622,211723..211836,211922..212034,212113..212169,212262..212326,212421..212548,212646..212696,212781..212859,212955..213048,213170..213267,213360..213449,213534..>214277))	Acanthamoeba castellanii str. Neff	14916343
ACA1_378220	mRNA	ACA1_378220	NW_004457391.1	214813	215794	R	ACA1_378220	complement(join(<214813..214917,215024..>215794))	Acanthamoeba castellanii str. Neff	14916344
ACA1_378240	mRNA	ACA1_378240	NW_004457391.1	219693	222048	D	ACA1_378240	join(<219693..219792,219865..219988,220080..220153,220261..220388,220483..220612,220687..220815,220897..221038,221134..221284,221397..221510,221636..221790,221916..>222048)	Acanthamoeba castellanii str. Neff	14916346
ACA1_378250	mRNA	ACA1_378250	NW_004457391.1	222213	223401	D	ACA1_378250	join(<222213..222368,222533..222790,222897..223076,223189..>223401)	Acanthamoeba castellanii str. Neff	14916347
ACA1_378260	mRNA	ACA1_378260	NW_004457391.1	223873	224827	D	ACA1_378260	join(<223873..224074,224208..224295,224434..224560,224804..>224827)	Acanthamoeba castellanii str. Neff	14916348
ACA1_378270	mRNA	ACA1_378270	NW_004457391.1	225444	225949	D	ACA1_378270	join(<225444..225594,225625..225693,225750..>225949)	Acanthamoeba castellanii str. Neff	14916349
ACA1_378280	mRNA	ACA1_378280	NW_004457391.1	225984	229942	D	ACA1_378280	join(<225984..226158,226229..226371,226515..226830,227006..227154,227250..227582,227832..228147,228305..228453,228652..228984,229050..229167,229295..229457,229531..>229942)	Acanthamoeba castellanii str. Neff	14916350
ACA1_378490	mRNA	ACA1_378490	NW_004457391.1	230008	231968	R	ACA1_378490	complement(join(<230008..230233,230314..230438,230528..230634,230725..230851,230940..231101,231240..231417,231490..231689,231811..231920,231941..>231968))	Acanthamoeba castellanii str. Neff	14916351
ACA1_378610	mRNA	ACA1_378610	NW_004457391.1	235097	236864	R	ACA1_378610	complement(join(<235097..235350,235396..235464,235506..235742,236165..>236864))	Acanthamoeba castellanii str. Neff	14916353
ACA1_378620	mRNA	ACA1_378620	NW_004457391.1	238152	240294	R	ACA1_378620	complement(join(<238152..238496,238579..238733,238819..239359,239390..239737,239753..239815,239890..>240294))	Acanthamoeba castellanii str. Neff	14916354
ACA1_378630	mRNA	ACA1_378630	NW_004457391.1	241182	244185	R	ACA1_378630	complement(join(<241182..241331,241440..241538,241829..242100,242198..242253,242395..242468,242577..242686,242783..242888,242978..243070,243163..243300,243323..243558,243676..243799,243890..243968,244085..>244185))	Acanthamoeba castellanii str. Neff	14916355
ACA1_378740	mRNA	ACA1_378740	NW_004457391.1	244698	245081	D	ACA1_378740	join(<244698..244760,244800..>245081)	Acanthamoeba castellanii str. Neff	14916356
ACA1_378750	mRNA	ACA1_378750	NW_004457391.1	245454	249636	D	ACA1_378750	join(<245454..245547,245728..245862,246011..246058,246143..246313,246425..246552,246710..246785,246888..246982,247146..247243,247356..247470,247588..247732,248053..248268,248342..249172,249266..>249636)	Acanthamoeba castellanii str. Neff	14916387
ACA1_378760	mRNA	ACA1_378760	NW_004457391.1	249753	250109	R	ACA1_378760	complement(<249753..>250109)	Acanthamoeba castellanii str. Neff	14916388
ACA1_378870	mRNA	ACA1_378870	NW_004457391.1	250423	255440	R	ACA1_378870	complement(join(<250423..250519,250613..250806,250920..251092,251173..251430,251518..251691,251770..251950,252068..252201,252326..252473,252605..252618,252641..253029,253408..253514,253703..253721,253857..253975,254077..254229,254366..254507,254648..254703,254799..254922,255001..255079,255169..255344,255376..>255440))	Acanthamoeba castellanii str. Neff	14916389
ACA1_378880	mRNA	ACA1_378880	NW_004457391.1	255559	256566	R	ACA1_378880	complement(<255559..>256566)	Acanthamoeba castellanii str. Neff	14916390
ACA1_378890	mRNA	ACA1_378890	NW_004457391.1	257495	258800	R	ACA1_378890	complement(join(<257495..257671,257798..258137,258332..258525,258684..>258800))	Acanthamoeba castellanii str. Neff	14916391
ACA1_378910	mRNA	ACA1_378910	NW_004457391.1	263008	263560	R	ACA1_378910	complement(join(<263008..263077,263187..>263560))	Acanthamoeba castellanii str. Neff	14916393
ACA1_378920	mRNA	ACA1_378920	NW_004457391.1	264600	265148	R	ACA1_378920	complement(join(<264600..264650,264774..>265148))	Acanthamoeba castellanii str. Neff	14916394
ACA1_378930	mRNA	ACA1_378930	NW_004457391.1	266192	266696	R	ACA1_378930	complement(join(<266192..266242,266367..>266696))	Acanthamoeba castellanii str. Neff	14916395
ACA1_379040	mRNA	ACA1_379040	NW_004457391.1	268836	269377	R	ACA1_379040	complement(join(<268836..268939,269122..>269377))	Acanthamoeba castellanii str. Neff	14916396
ACA1_379050	mRNA	ACA1_379050	NW_004457391.1	269979	271815	R	ACA1_379050	complement(join(<269979..270046,270149..270296,270423..270546,270621..270712,270844..270921,270995..271100,271220..271291,271364..271456,271534..271656,271760..>271815))	Acanthamoeba castellanii str. Neff	14916397
ACA1_379060	mRNA	ACA1_379060	NW_004457391.1	272113	273632	D	ACA1_379060	join(<272113..272363,272454..272697,272775..272847,272933..273127,273246..273414,273536..>273632)	Acanthamoeba castellanii str. Neff	14916398
ACA1_379070	mRNA	ACA1_379070	NW_004457391.1	273820	275311	D	ACA1_379070	join(<273820..274054,274072..274248,274321..274386,274505..274576,274640..274724,274912..275056,275150..>275311)	Acanthamoeba castellanii str. Neff	14916399
ACA1_379080	mRNA	ACA1_379080	NW_004457391.1	275835	276947	D	ACA1_379080	join(<275835..275891,275964..276596,276737..276786,276866..>276947)	Acanthamoeba castellanii str. Neff	14916400
ACA1_379090	mRNA	ACA1_379090	NW_004457391.1	277092	277841	D	ACA1_379090	join(<277092..277263,277399..277463,277524..>277841)	Acanthamoeba castellanii str. Neff	14916401
ACA1_379100	mRNA	ACA1_379100	NW_004457391.1	277882	278870	R	ACA1_379100	complement(join(<277882..278206,278292..278425,278504..278623,278700..>278870))	Acanthamoeba castellanii str. Neff	14916402
ACA1_379110	mRNA	ACA1_379110	NW_004457391.1	279098	280209	R	ACA1_379110	complement(join(<279098..279383,279480..279582,279683..279736,279747..279828,279967..>280209))	Acanthamoeba castellanii str. Neff	14916403
ACA1_379120	mRNA	ACA1_379120	NW_004457391.1	280242	280631	D	ACA1_379120	<280242..>280631	Acanthamoeba castellanii str. Neff	14916404
ACA1_379130	mRNA	ACA1_379130	NW_004457391.1	280790	285756	R	ACA1_379130	complement(join(<280790..280925,280939..281389,281504..281603,281730..281837,281996..282085,282191..282329,282489..282599,282669..282771,282856..282940,283056..283158,283248..283430,283509..283638,283763..283999,284021..284262,284321..284516,284531..284887,284985..285137,285277..285346,285419..285531,285621..>285756))	Acanthamoeba castellanii str. Neff	14916405
ACA1_379140	mRNA	ACA1_379140	NW_004457391.1	286523	288521	D	ACA1_379140	join(<286523..286586,286668..286856,286944..287192,287264..287685,287765..287846,287957..288090,288178..288412,288502..>288521)	Acanthamoeba castellanii str. Neff	14916406
ACA1_379150	mRNA	ACA1_379150	NW_004457391.1	288759	290045	D	ACA1_379150	<288759..>290045	Acanthamoeba castellanii str. Neff	14916407
ACA1_379160	mRNA	ACA1_379160	NW_004457391.1	291173	294237	D	ACA1_379160	join(<291173..291264,291352..291812,291940..292024,292134..293934,293947..>294237)	Acanthamoeba castellanii str. Neff	14916408
ACA1_379170	mRNA	ACA1_379170	NW_004457391.1	294327	296703	D	ACA1_379170	join(<294327..294398,294512..294609,294696..294714,294921..295033,295207..295303,295409..295519,295614..295682,295810..295917,296018..296187,296298..296384,296526..>296703)	Acanthamoeba castellanii str. Neff	14916409
ACA1_379180	mRNA	ACA1_379180	NW_004457391.1	297034	297624	D	ACA1_379180	join(<297034..297050,297117..297226,297302..297417,297514..>297624)	Acanthamoeba castellanii str. Neff	14916410
ACA1_379190	mRNA	ACA1_379190	NW_004457391.1	298017	299278	R	ACA1_379190	complement(join(<298017..298245,298320..>299278))	Acanthamoeba castellanii str. Neff	14916411
ACA1_379200	mRNA	ACA1_379200	NW_004457391.1	299784	300619	D	ACA1_379200	join(<299784..299790,299982..300476,300543..>300619)	Acanthamoeba castellanii str. Neff	14916412
ACA1_379210	mRNA	ACA1_379210	NW_004457391.1	300711	302538	D	ACA1_379210	join(<300711..300717,300839..300907,301000..301121,301210..301278,301351..301470,301598..301676,301795..301936,302021..302084,302125..302229,302434..>302538)	Acanthamoeba castellanii str. Neff	14916413
ACA1_379220	mRNA	ACA1_379220	NW_004457391.1	302614	304413	R	ACA1_379220	complement(join(<302614..302837,302937..302955,303029..303131,303220..303397,303519..303618,303755..303859,303975..304117,304214..304229,304300..>304413))	Acanthamoeba castellanii str. Neff	14916414
ACA1_379230	mRNA	ACA1_379230	NW_004457391.1	304640	306123	D	ACA1_379230	join(<304640..304903,305413..305607,305720..306000,306090..>306123)	Acanthamoeba castellanii str. Neff	14916415
ACA1_379240	mRNA	ACA1_379240	NW_004457391.1	306221	307295	R	ACA1_379240	complement(join(<306221..306805,306918..>307295))	Acanthamoeba castellanii str. Neff	14916416
ACA1_379250	mRNA	ACA1_379250	NW_004457391.1	307383	308569	R	ACA1_379250	complement(join(<307383..307477,307583..307698,307812..307909,307932..308061,308094..>308569))	Acanthamoeba castellanii str. Neff	14916417
ACA1_379260	mRNA	ACA1_379260	NW_004457391.1	310237	314535	D	ACA1_379260	join(<310237..310532,310707..310950,311031..311213,311290..311436,311517..311575,311658..311841,311940..312173,312295..312568,312671..312885,312956..313283,313356..313424,313506..313627,313709..314055,314146..314270,314360..>314535)	Acanthamoeba castellanii str. Neff	14916418
ACA1_379280	mRNA	ACA1_379280	NW_004457391.1	319803	323859	R	ACA1_379280	complement(join(<319803..319824,319903..319994,320096..320203,320295..320380,320516..320642,320734..321209,321290..321432,321559..321604,321678..321812,321939..322540,322586..322631,322729..322779,322853..323742,323855..>323859))	Acanthamoeba castellanii str. Neff	14916420
ACA1_379290	mRNA	ACA1_379290	NW_004457391.1	324272	325889	D	ACA1_379290	join(<324272..324632,324794..324860,324947..325057,325204..325332,325419..325621,325729..>325889)	Acanthamoeba castellanii str. Neff	14916421
ACA1_379300	mRNA	ACA1_379300	NW_004457391.1	326037	328117	R	ACA1_379300	complement(join(<326037..326146,326236..326415,326508..326598,326707..326835,326877..326937,327018..327093,327193..327316,327400..327517,327610..327683,327760..327843,327911..>328117))	Acanthamoeba castellanii str. Neff	14916422
ACA1_379310	mRNA	ACA1_379310	NW_004457391.1	328295	328939	R	ACA1_379310	complement(<328295..>328939)	Acanthamoeba castellanii str. Neff	14916286
ACA1_379320	mRNA	ACA1_379320	NW_004457391.1	329011	329808	R	ACA1_379320	complement(<329011..>329808)	Acanthamoeba castellanii str. Neff	14916287
ACA1_379330	mRNA	ACA1_379330	NW_004457391.1	330044	331875	R	ACA1_379330	complement(join(<330044..330263,330364..330476,330594..330662,330848..330899,330984..331016,331106..331233,331402..>331875))	Acanthamoeba castellanii str. Neff	14916288
ACA1_379340	mRNA	ACA1_379340	NW_004457391.1	332074	334828	R	ACA1_379340	complement(join(<332074..332529,332625..332769,332844..333531,333551..333951,334027..334359,334501..334678,334744..>334828))	Acanthamoeba castellanii str. Neff	14916289
ACA1_379350	mRNA	ACA1_379350	NW_004457391.1	335359	340132	D	ACA1_379350	join(<335359..335490,335553..335681,335776..335877,335977..336117,336192..336387,336537..336649,336729..336833,336932..337037,337386..337425,337597..337666,337776..337834,337919..338051,338143..338283,338368..338451,338548..338613,338682..338798,338900..339109,339221..339388,339752..339829,339926..>340132)	Acanthamoeba castellanii str. Neff	14916290
ACA1_379360	mRNA	ACA1_379360	NW_004457391.1	340634	341504	D	ACA1_379360	join(<340634..341160,341183..>341504)	Acanthamoeba castellanii str. Neff	14916291
ACA1_379370	mRNA	ACA1_379370	NW_004457391.1	342160	342874	R	ACA1_379370	complement(join(<342160..342535,342570..>342874))	Acanthamoeba castellanii str. Neff	14916292
ACA1_379380	mRNA	ACA1_379380	NW_004457391.1	342877	345216	R	ACA1_379380	complement(join(<342877..343068,343271..343474,343624..343918,344035..344159,344296..344428,344555..344954,345054..345144,345175..>345216))	Acanthamoeba castellanii str. Neff	14916293
ACA1_379390	mRNA	ACA1_379390	NW_004457391.1	345816	348023	R	ACA1_379390	complement(join(<345816..346437,346502..346547,346680..346748,346826..346906,346988..347066,347180..347292,347366..347379,347512..347650,347748..347835,347925..>348023))	Acanthamoeba castellanii str. Neff	14916294
ACA1_379400	mRNA	ACA1_379400	NW_004457391.1	348460	352779	D	ACA1_379400	join(<348460..348510,348837..348922,349050..349204,349297..349454,349568..349649,349744..349844,349968..350119,350205..350250,350362..350441,350549..350772,350856..350965,351098..351170,351266..351347,351436..351603,351715..351826,351933..352097,352204..352257,352357..352440,352576..>352779)	Acanthamoeba castellanii str. Neff	14916295
ACA1_379410	mRNA	ACA1_379410	NW_004457391.1	353158	361530	D	ACA1_379410	join(<353158..353161,353433..353555,353888..354042,354200..354395,354538..354693,354799..354820,354906..355081,355172..355378,355464..355543,355690..355913,356034..356859,356963..357052,357122..357272,357360..357500,357597..358725,358804..358904,359046..359309,359397..359603,359654..>361530)	Acanthamoeba castellanii str. Neff	14916296
ACA1_379420	mRNA	ACA1_379420	NW_004457391.1	361614	362252	R	ACA1_379420	complement(join(<361614..361983,362176..>362252))	Acanthamoeba castellanii str. Neff	14916297
ACA1_379430	mRNA	ACA1_379430	NW_004457391.1	362706	366669	D	ACA1_379430	join(<362706..362770,362850..362908,363021..363132,363240..363353,363467..363563,363700..364128,364195..364268,364380..365313,365461..365690,365853..>366669)	Acanthamoeba castellanii str. Neff	14916298
ACA1_379440	mRNA	ACA1_379440	NW_004457391.1	366746	367045	R	ACA1_379440	complement(<366746..>367045)	Acanthamoeba castellanii str. Neff	14916299
ACA1_379450	mRNA	ACA1_379450	NW_004457391.1	367530	369258	R	ACA1_379450	complement(join(<367530..367601,367690..367745,367844..367941,368033..368132,368254..368329,368421..368537,368630..368724,368834..368995,369090..>369258))	Acanthamoeba castellanii str. Neff	14916300
ACA1_379460	mRNA	ACA1_379460	NW_004457391.1	369533	371942	R	ACA1_379460	complement(join(<369533..369864,369948..370083,370160..370677,370770..370910,371008..371097,371243..371306,371556..371630,371701..371737,371857..>371942))	Acanthamoeba castellanii str. Neff	14916280
ACA1_379470	mRNA	ACA1_379470	NW_004457391.1	372314	372790	D	ACA1_379470	<372314..>372790	Acanthamoeba castellanii str. Neff	14916281
ACA1_379480	mRNA	ACA1_379480	NW_004457391.1	373202	378697	D	ACA1_379480	join(<373202..373307,373422..373541,373621..373707,373796..373927,374047..374157,374251..374382,374484..374551,374646..375021,375136..375209,375324..375501,375612..375823,375926..376027,376109..376222,376380..376748,376888..376946,377034..377185,377321..377523,377664..377773,377890..378039,378185..378375,378459..>378697)	Acanthamoeba castellanii str. Neff	14916282
ACA1_379490	mRNA	ACA1_379490	NW_004457391.1	378884	379092	R	ACA1_379490	complement(join(<378884..378994,379015..>379092))	Acanthamoeba castellanii str. Neff	14916283
ACA1_379500	mRNA	ACA1_379500	NW_004457391.1	379313	381418	D	ACA1_379500	<379313..>381418	Acanthamoeba castellanii str. Neff	14916284
ACA1_379510	mRNA	ACA1_379510	NW_004457391.1	381832	382677	R	ACA1_379510	complement(join(<381832..381849,381973..382131,382250..382446,382539..>382677))	Acanthamoeba castellanii str. Neff	14916285
ACA1_163310	mRNA	ACA1_163310	NW_004457390.1	384	1737	D	ACA1_163310	join(<384..517,586..650,721..867,955..1112,1187..1293,1381..1544,1634..>1737)	Acanthamoeba castellanii str. Neff	14916175
ACA1_163320	mRNA	ACA1_163320	NW_004457390.1	2610	5355	D	ACA1_163320	join(<2610..2756,2855..3124,3189..3358,3428..3481,3548..3629,3702..3911,3956..4086,4118..4331,4418..4687,4758..4981,5049..5130,5203..>5355)	Acanthamoeba castellanii str. Neff	14916176
ACA1_163330	mRNA	ACA1_163330	NW_004457390.1	5431	6945	D	ACA1_163330	join(<5431..5451,6086..6233,6321..6460,6651..6718,6876..>6945)	Acanthamoeba castellanii str. Neff	14916177
ACA1_163350	mRNA	ACA1_163350	NW_004457390.1	8907	9212	D	ACA1_163350	<8907..>9212	Acanthamoeba castellanii str. Neff	14916179
ACA1_163360	mRNA	ACA1_163360	NW_004457390.1	9338	11961	R	ACA1_163360	complement(join(<9338..9559,9665..9927,10006..10102,10187..10312,10380..10474,10589..10654,10775..10868,10973..11310,11499..>11961))	Acanthamoeba castellanii str. Neff	14916180
ACA1_163370	mRNA	ACA1_163370	NW_004457390.1	12337	18095	D	ACA1_163370	join(<12337..12363,12674..12736,12826..12970,13071..13242,13357..13426,13513..13613,13687..13778,13854..14112,14244..14344,14415..15400,15502..15666,15766..15937,16037..16524,16591..16860,16979..17166,17361..17461,17578..17702,17810..17931,18029..>18095)	Acanthamoeba castellanii str. Neff	14916238
ACA1_163380	mRNA	ACA1_163380	NW_004457390.1	18207	20963	R	ACA1_163380	complement(join(<18207..18334,18422..18549,18664..18733,18806..18882,19019..19198,19313..19397,19535..19599,19689..19841,19960..20039,20118..20211,20362..20429,20525..20580,20657..>20963))	Acanthamoeba castellanii str. Neff	14916239
ACA1_163390	mRNA	ACA1_163390	NW_004457390.1	21218	21988	D	ACA1_163390	join(<21218..21588,21655..>21988)	Acanthamoeba castellanii str. Neff	14916240
ACA1_163400	mRNA	ACA1_163400	NW_004457390.1	22490	25356	R	ACA1_163400	complement(join(<22490..22873,22899..23067,23191..24170,24292..24411,24530..24659,24766..24909,25042..25109,25252..>25356))	Acanthamoeba castellanii str. Neff	14916241
ACA1_163410	mRNA	ACA1_163410	NW_004457390.1	26069	32250	D	ACA1_163410	join(<26069..26543,26652..26719,26805..27309,27537..27892,27979..28041,28181..28308,28386..28477,28553..28630,28745..28831,28936..29019,29097..29175,29239..29327,29408..29516,29624..29946,30050..30151,30231..30298,30407..30481,30576..30651,30770..30868,30967..31061,31225..31359,31455..31520,31655..31771,31853..31999,32107..>32250)	Acanthamoeba castellanii str. Neff	14916242
ACA1_163420	mRNA	ACA1_163420	NW_004457390.1	32660	32893	D	ACA1_163420	<32660..>32893	Acanthamoeba castellanii str. Neff	14916227
ACA1_163440	mRNA	ACA1_163440	NW_004457390.1	36466	38406	R	ACA1_163440	complement(join(<36466..36612,36727..36935,37015..37370,37441..37543,37624..37718,37826..37921,37994..38102,38178..>38406))	Acanthamoeba castellanii str. Neff	14916229
ACA1_163450	mRNA	ACA1_163450	NW_004457390.1	38492	40106	D	ACA1_163450	join(<38492..38617,38784..38947,39016..39142,39234..39441,39585..39790,40080..>40106)	Acanthamoeba castellanii str. Neff	14916230
ACA1_163460	mRNA	ACA1_163460	NW_004457390.1	40915	42069	R	ACA1_163460	complement(join(<40915..40971,41105..41208,41294..41384,41507..41621,41714..41836,41906..>42069))	Acanthamoeba castellanii str. Neff	14916231
ACA1_163470	mRNA	ACA1_163470	NW_004457390.1	42539	47139	D	ACA1_163470	join(<42539..42963,43365..43454,43728..43836,44051..44079,44198..44367,44472..45213,45286..45359,45449..45663,45790..45960,46052..46187,46348..46367,46398..46582,46673..46823,46993..>47139)	Acanthamoeba castellanii str. Neff	14916232
ACA1_163480	mRNA	ACA1_163480	NW_004457390.1	47526	47753	D	ACA1_163480	<47526..>47753	Acanthamoeba castellanii str. Neff	14916233
ACA1_163490	mRNA	ACA1_163490	NW_004457390.1	47881	49935	R	ACA1_163490	complement(join(<47881..48036,48143..48249,48381..48425,48480..48528,48626..48715,48978..49049,49319..49570,49663..>49935))	Acanthamoeba castellanii str. Neff	14916234
ACA1_163500	mRNA	ACA1_163500	NW_004457390.1	51165	52762	R	ACA1_163500	complement(join(<51165..51379,51502..51633,51706..52326,52360..52721,52752..>52762))	Acanthamoeba castellanii str. Neff	14916235
ACA1_163510	mRNA	ACA1_163510	NW_004457390.1	52897	54366	R	ACA1_163510	complement(join(<52897..52989,53244..53293,53355..53556,53676..53720,53792..53925,54029..54163,54249..>54366))	Acanthamoeba castellanii str. Neff	14916236
ACA1_163620	mRNA	ACA1_163620	NW_004457390.1	54584	55159	R	ACA1_163620	complement(<54584..>55159)	Acanthamoeba castellanii str. Neff	14916237
ACA1_163630	mRNA	ACA1_163630	NW_004457390.1	57785	60077	R	ACA1_163630	complement(join(<57785..58019,58152..58244,58328..58488,58597..58702,58810..58881,58980..59080,59180..59255,59404..59482,59566..59662,59757..59828,59934..>60077))	Acanthamoeba castellanii str. Neff	14916250
ACA1_163640	mRNA	ACA1_163640	NW_004457390.1	60813	62351	R	ACA1_163640	complement(join(<60813..61008,61150..61243,61339..61381,61426..61593,61693..61790,61908..61994,62072..>62351))	Acanthamoeba castellanii str. Neff	14916251
ACA1_163650	mRNA	ACA1_163650	NW_004457390.1	62838	64861	D	ACA1_163650	join(<62838..62982,63060..63163,63229..63531,63691..63783,63892..63981,64094..64157,64238..64297,64455..64517,64600..64641,64737..>64861)	Acanthamoeba castellanii str. Neff	14916252
ACA1_163660	mRNA	ACA1_163660	NW_004457390.1	64974	66067	R	ACA1_163660	complement(join(<64974..65090,65161..65265,65344..65451,65566..65575,65664..65673,65685..65732,65827..>66067))	Acanthamoeba castellanii str. Neff	14916253
ACA1_163670	mRNA	ACA1_163670	NW_004457390.1	66439	67710	D	ACA1_163670	join(<66439..67206,67370..67459,67561..>67710)	Acanthamoeba castellanii str. Neff	14916254
ACA1_163680	mRNA	ACA1_163680	NW_004457390.1	68324	69588	R	ACA1_163680	complement(join(<68324..68422,68507..68569,68715..68797,68872..69034,69117..69198,69324..69411,69507..>69588))	Acanthamoeba castellanii str. Neff	14916255
ACA1_163790	mRNA	ACA1_163790	NW_004457390.1	70415	72014	R	ACA1_163790	complement(join(<70415..70547,70612..70741,70832..70935,71022..71256,71326..71506,71599..71651,71717..71822,71895..>72014))	Acanthamoeba castellanii str. Neff	14916256
ACA1_163800	mRNA	ACA1_163800	NW_004457390.1	72353	73081	D	ACA1_163800	join(<72353..72595,72684..72761,72847..73006,73068..>73081)	Acanthamoeba castellanii str. Neff	14916257
ACA1_163810	mRNA	ACA1_163810	NW_004457390.1	73192	73611	R	ACA1_163810	complement(join(<73192..73250,73314..73419,73492..>73611))	Acanthamoeba castellanii str. Neff	14916258
ACA1_163820	mRNA	ACA1_163820	NW_004457390.1	74283	76885	R	ACA1_163820	complement(join(<74283..74629,74699..74857,74961..75026,75181..75445,75529..75765,75835..75983,76080..76296,76590..76646,76772..>76885))	Acanthamoeba castellanii str. Neff	14916259
ACA1_163830	mRNA	ACA1_163830	NW_004457390.1	79403	86400	D	ACA1_163830	join(<79403..79522,79596..79673,79759..79918,79999..80172,80257..80800,80905..81025,81108..81241,81321..81459,81542..81622,81715..81877,81979..82046,82083..82816,82905..83010,83126..83296,83362..83513,83613..83675,83754..83886,83975..84086,84166..84250,84335..84494,84594..84702,84794..84921,85029..85335,85454..85613,85702..85805,85908..86117,86228..>86400)	Acanthamoeba castellanii str. Neff	14916260
ACA1_163840	mRNA	ACA1_163840	NW_004457390.1	86937	89534	D	ACA1_163840	join(<86937..86970,87084..87114,87223..87388,87556..87891,87951..88025,88149..88314,88456..88539,88648..88905,89011..89105,89181..89332,89429..>89534)	Acanthamoeba castellanii str. Neff	14916261
ACA1_163850	mRNA	ACA1_163850	NW_004457390.1	89699	91658	R	ACA1_163850	complement(join(<89699..89908,90038..90111,90183..90279,90510..90549,90560..90585,90687..90801,90902..91035,91131..91205,91500..>91658))	Acanthamoeba castellanii str. Neff	14916144
ACA1_163860	mRNA	ACA1_163860	NW_004457390.1	92850	95346	R	ACA1_163860	complement(join(<92850..92923,93026..93144,93225..93333,93450..93833,93907..94665,94739..95015,95173..>95346))	Acanthamoeba castellanii str. Neff	14916145
ACA1_163870	mRNA	ACA1_163870	NW_004457390.1	95927	96442	D	ACA1_163870	join(<95927..96026,96126..>96442)	Acanthamoeba castellanii str. Neff	14916146
ACA1_163890	mRNA	ACA1_163890	NW_004457390.1	105707	108038	R	ACA1_163890	complement(join(<105707..105811,105900..106029,106146..106373,106471..107254,107409..107474,107562..107666,107765..>108038))	Acanthamoeba castellanii str. Neff	14916148
ACA1_163900	mRNA	ACA1_163900	NW_004457390.1	108279	109057	D	ACA1_163900	join(<108279..108335,108434..108543,108673..108780,108928..>109057)	Acanthamoeba castellanii str. Neff	14916149
ACA1_163910	mRNA	ACA1_163910	NW_004457390.1	109255	111526	D	ACA1_163910	join(<109255..109447,109518..109556,109654..109767,109868..109932,110050..110230,110345..110484,110570..110599,110688..110832,110914..111001,111085..111290,111375..>111526)	Acanthamoeba castellanii str. Neff	14916150
ACA1_163920	mRNA	ACA1_163920	NW_004457390.1	111600	114874	R	ACA1_163920	complement(join(<111600..111764,111870..111951,112100..112221,112330..112515,112604..112717,112817..112988,113101..113274,113331..113384,113463..114559,114620..114727,114842..>114874))	Acanthamoeba castellanii str. Neff	14916151
ACA1_163930	mRNA	ACA1_163930	NW_004457390.1	115190	116990	D	ACA1_163930	join(<115190..115700,115772..115954,116011..116332,116450..>116990)	Acanthamoeba castellanii str. Neff	14916152
ACA1_163940	mRNA	ACA1_163940	NW_004457390.1	117245	118403	D	ACA1_163940	join(<117245..117963,118031..118153,118226..118297,118370..>118403)	Acanthamoeba castellanii str. Neff	14916153
ACA1_163950	mRNA	ACA1_163950	NW_004457390.1	118867	119241	R	ACA1_163950	complement(<118867..>119241)	Acanthamoeba castellanii str. Neff	14916154
ACA1_163960	mRNA	ACA1_163960	NW_004457390.1	119444	119713	R	ACA1_163960	complement(<119444..>119713)	Acanthamoeba castellanii str. Neff	14916155
ACA1_163970	mRNA	ACA1_163970	NW_004457390.1	119982	123264	D	ACA1_163970	join(<119982..120063,120208..120296,120382..120453,120569..120685,120780..120881,120997..121092,121155..121229,121363..121452,121602..121818,121936..122021,122084..122156,122236..122946,123041..>123264)	Acanthamoeba castellanii str. Neff	14916156
ACA1_163980	mRNA	ACA1_163980	NW_004457390.1	123512	124269	R	ACA1_163980	complement(join(<123512..123981,124059..>124269))	Acanthamoeba castellanii str. Neff	14916157
ACA1_163990	mRNA	ACA1_163990	NW_004457390.1	124662	127424	R	ACA1_163990	complement(join(<124662..125047,125107..125328,125429..125559,125649..125725,125923..126110,126220..126378,126453..126499,126572..126722,126834..126982,127048..127198,127313..>127424))	Acanthamoeba castellanii str. Neff	14916158
ACA1_164000	mRNA	ACA1_164000	NW_004457390.1	127844	130462	R	ACA1_164000	complement(join(<127844..128289,128356..128476,128575..128646,128723..128893,128964..129131,129223..129383,129479..129687,129802..129930,130107..>130462))	Acanthamoeba castellanii str. Neff	14916181
ACA1_164010	mRNA	ACA1_164010	NW_004457390.1	131012	134817	R	ACA1_164010	complement(join(<131012..131207,131307..131400,131472..131643,131731..131841,131908..132008,132116..132308,132373..132518,132617..132745,132847..132964,133081..133145,133242..133461,133584..133712,133807..133890,133986..134049,134171..134290,134399..134544,134603..134676,134784..>134817))	Acanthamoeba castellanii str. Neff	14916182
ACA1_164020	mRNA	ACA1_164020	NW_004457390.1	134891	139759	R	ACA1_164020	complement(join(<134891..135020,135118..135224,135364..135523,135619..135687,135766..135863,135950..136057,136255..136441,136536..136641,136737..136782,136886..136975,137137..137254,137327..137673,137755..137825,137903..137972,138048..138188,138279..138373,138470..138578,138613..138690,138806..138876,138997..139093,139211..139267,139340..>139759))	Acanthamoeba castellanii str. Neff	14916183
ACA1_164030	mRNA	ACA1_164030	NW_004457390.1	140380	144430	D	ACA1_164030	join(<140380..141093,141114..141560,141575..142118,142215..142721,142845..143116,143240..143403,143542..143654,143733..143851,143956..144090,144212..>144430)	Acanthamoeba castellanii str. Neff	14916184
ACA1_164040	mRNA	ACA1_164040	NW_004457390.1	144582	146689	R	ACA1_164040	complement(join(<144582..144713,144832..144998,145092..145224,145298..145458,145532..145632,145725..145873,145972..146388,146459..>146689))	Acanthamoeba castellanii str. Neff	14916185
ACA1_164050	mRNA	ACA1_164050	NW_004457390.1	146946	149286	R	ACA1_164050	complement(join(<146946..147222,147302..147399,147485..147740,147775..147800,147898..147992,148073..148381,148457..148543,148656..148860,148969..>149286))	Acanthamoeba castellanii str. Neff	14916186
ACA1_164060	mRNA	ACA1_164060	NW_004457390.1	149665	151153	R	ACA1_164060	complement(join(<149665..149799,149922..150061,150178..150267,150374..150419,150500..150642,150742..>151153))	Acanthamoeba castellanii str. Neff	14916187
ACA1_164070	mRNA	ACA1_164070	NW_004457390.1	151553	153544	D	ACA1_164070	join(<151553..151883,151957..152408,152480..152607,152682..152783,152875..153265,153407..>153544)	Acanthamoeba castellanii str. Neff	14916188
ACA1_164080	mRNA	ACA1_164080	NW_004457390.1	153689	157067	R	ACA1_164080	complement(join(<153689..153857,153953..154122,154190..154591,154684..154774,154861..155063,155146..155217,155312..155380,155456..155602,155686..155830,155910..155996,156071..156120,156190..156318,156389..156476,156543..156660,156769..156885,156953..>157067))	Acanthamoeba castellanii str. Neff	14916189
ACA1_164090	mRNA	ACA1_164090	NW_004457390.1	157712	161261	D	ACA1_164090	join(<157712..157937,158024..158833,158903..159478,159552..159676,159744..160306,160382..160526,160602..>161261)	Acanthamoeba castellanii str. Neff	14916190
ACA1_164100	mRNA	ACA1_164100	NW_004457390.1	161394	164122	R	ACA1_164100	complement(join(<161394..161528,161612..161692,161804..161890,161963..162038,162166..162287,162394..162501,162624..162728,162800..162968,163102..163274,163385..163468,163557..163649,163746..163890,163989..>164122))	Acanthamoeba castellanii str. Neff	14916191
ACA1_164110	mRNA	ACA1_164110	NW_004457390.1	164757	165134	D	ACA1_164110	<164757..>165134	Acanthamoeba castellanii str. Neff	14916192
ACA1_164120	mRNA	ACA1_164120	NW_004457390.1	165367	169207	D	ACA1_164120	join(<165367..165901,166009..166172,166279..166374,166483..166604,166726..166879,166971..167047,167173..167259,167339..167414,167512..167671,167788..167883,167978..168052,168150..168342,168537..168721,168839..168938,169027..>169207)	Acanthamoeba castellanii str. Neff	14916193
ACA1_164130	mRNA	ACA1_164130	NW_004457390.1	169360	170163	D	ACA1_164130	<169360..>170163	Acanthamoeba castellanii str. Neff	14916159
ACA1_164140	mRNA	ACA1_164140	NW_004457390.1	170529	170979	R	ACA1_164140	complement(join(<170529..170894,170971..>170979))	Acanthamoeba castellanii str. Neff	14916160
ACA1_164150	mRNA	ACA1_164150	NW_004457390.1	171289	174407	R	ACA1_164150	complement(join(<171289..171866,171958..172640,172742..173316,173431..173588,173671..173921,173993..174059,174176..>174407))	Acanthamoeba castellanii str. Neff	14916161
ACA1_164160	mRNA	ACA1_164160	NW_004457390.1	174819	177287	R	ACA1_164160	complement(join(<174819..175032,175143..175218,175307..175426,175534..175787,175835..176028,176113..176222,176309..176436,176541..176644,176720..176837,176954..177086,177197..>177287))	Acanthamoeba castellanii str. Neff	14916162
ACA1_164170	mRNA	ACA1_164170	NW_004457390.1	177435	179377	R	ACA1_164170	complement(join(<177435..177495,177566..177697,177823..177952,178023..178148,178233..178344,178410..178542,178618..178665,178744..178803,178891..179018,179032..179065,179118..>179377))	Acanthamoeba castellanii str. Neff	14916163
ACA1_164180	mRNA	ACA1_164180	NW_004457390.1	180222	184100	D	ACA1_164180	join(<180222..180252,180341..180435,180507..180617,180857..180957,181038..181126,181221..181377,181389..182337,182427..>184100)	Acanthamoeba castellanii str. Neff	14916164
ACA1_164190	mRNA	ACA1_164190	NW_004457390.1	184367	187400	R	ACA1_164190	complement(join(<184367..185497,185652..185751,185861..185939,186114..186308,186375..186468,186546..186731,186807..186918,186971..187054,187067..187167,187212..>187400))	Acanthamoeba castellanii str. Neff	14916165
ACA1_164200	mRNA	ACA1_164200	NW_004457390.1	187957	189761	D	ACA1_164200	join(<187957..188226,188287..188369,188430..188536,188660..188772,188831..188909,189073..189288,189357..189550,189633..>189761)	Acanthamoeba castellanii str. Neff	14916166
ACA1_164210	mRNA	ACA1_164210	NW_004457390.1	190914	196265	D	ACA1_164210	join(<190914..191022,191103..191303,191405..191769,191839..191926,192014..192128,192381..192431,192535..192810,192899..193057,193164..193248,193356..193466,193580..194386,194414..195785,195957..196039,196116..>196265)	Acanthamoeba castellanii str. Neff	14916167
ACA1_164330	mRNA	ACA1_164330	NW_004457390.1	209428	211009	R	ACA1_164330	complement(join(<209428..209563,209652..209763,209873..210027,210125..210219,210342..210417,210516..210571,210681..210754,210868..>211009))	Acanthamoeba castellanii str. Neff	14916169
ACA1_164340	mRNA	ACA1_164340	NW_004457390.1	211071	212898	D	ACA1_164340	join(<211071..211171,211313..211355,211386..211472,211662..211725,211791..211901,211970..212035,212105..212158,212221..212276,212363..212431,212569..212656,212732..>212898)	Acanthamoeba castellanii str. Neff	14916170
ACA1_164350	mRNA	ACA1_164350	NW_004457390.1	213145	214341	D	ACA1_164350	join(<213145..213178,213338..>214341)	Acanthamoeba castellanii str. Neff	14916171
ACA1_164360	mRNA	ACA1_164360	NW_004457390.1	215008	215935	D	ACA1_164360	join(<215008..215766,215852..>215935)	Acanthamoeba castellanii str. Neff	14916172
ACA1_164370	mRNA	ACA1_164370	NW_004457390.1	216293	219164	D	ACA1_164370	join(<216293..216381,216476..216589,216763..217230,217316..217447,217527..217819,217961..218072,218189..218334,218513..218613,218750..218833,218943..>219164)	Acanthamoeba castellanii str. Neff	14916173
ACA1_164380	mRNA	ACA1_164380	NW_004457390.1	219760	225326	D	ACA1_164380	join(<219760..221261,221362..222670,222765..>225326)	Acanthamoeba castellanii str. Neff	14916174
ACA1_164390	mRNA	ACA1_164390	NW_004457390.1	225428	227148	R	ACA1_164390	complement(join(<225428..226585,226684..>227148))	Acanthamoeba castellanii str. Neff	14916194
ACA1_164500	mRNA	ACA1_164500	NW_004457390.1	228952	232389	D	ACA1_164500	join(<228952..228969,229161..229331,229529..229601,229701..229772,229856..230142,230235..230592,230722..230915,231000..231210,231285..231445,231529..231875,231910..232084,232210..>232389)	Acanthamoeba castellanii str. Neff	14916195
ACA1_164510	mRNA	ACA1_164510	NW_004457390.1	232844	235838	D	ACA1_164510	join(<232844..233223,233320..233368,233451..233563,233661..233832,233950..234066,234224..234382,234470..234675,234821..234870,234940..235028,235123..235220,235324..235528,235587..>235838)	Acanthamoeba castellanii str. Neff	14916196
ACA1_164520	mRNA	ACA1_164520	NW_004457390.1	235940	236354	R	ACA1_164520	complement(join(<235940..235984,236056..236207,236294..>236354))	Acanthamoeba castellanii str. Neff	14916197
ACA1_164530	mRNA	ACA1_164530	NW_004457390.1	236550	236667	R	ACA1_164530	complement(join(<236550..236596,236625..>236667))	Acanthamoeba castellanii str. Neff	14916198
ACA1_164640	mRNA	ACA1_164640	NW_004457390.1	238263	239303	D	ACA1_164640	join(<238263..238465,238532..238622,238760..238867,238921..238935,239008..239161,239236..>239303)	Acanthamoeba castellanii str. Neff	14916199
ACA1_164650	mRNA	ACA1_164650	NW_004457390.1	240147	243937	D	ACA1_164650	join(<240147..240650,240722..240782,240865..241030,241189..241250,241622..241710,241771..241821,241902..242039,242143..242349,242442..242723,242802..242881,242948..243089,243173..243296,243392..243505,243567..243685,243755..>243937)	Acanthamoeba castellanii str. Neff	14916200
ACA1_164660	mRNA	ACA1_164660	NW_004457390.1	244518	245871	R	ACA1_164660	complement(join(<244518..244620,244692..244788,244868..245014,245088..245233,245329..245424,245534..245671,245741..>245871))	Acanthamoeba castellanii str. Neff	14916201
ACA1_164670	mRNA	ACA1_164670	NW_004457390.1	246508	247095	D	ACA1_164670	<246508..>247095	Acanthamoeba castellanii str. Neff	14916202
ACA1_164680	mRNA	ACA1_164680	NW_004457390.1	247492	248567	R	ACA1_164680	complement(join(<247492..247701,247779..247877,247949..247960,248060..248155,248376..>248567))	Acanthamoeba castellanii str. Neff	14916203
ACA1_164700	mRNA	ACA1_164700	NW_004457390.1	253072	255738	D	ACA1_164700	join(<253072..253636,253743..254134,254244..254486,254562..254697,254788..254972,255064..255248,255311..255482,255547..>255738)	Acanthamoeba castellanii str. Neff	14916205
ACA1_164710	mRNA	ACA1_164710	NW_004457390.1	257216	258001	R	ACA1_164710	complement(join(<257216..257838,257992..>258001))	Acanthamoeba castellanii str. Neff	14916206
ACA1_164720	mRNA	ACA1_164720	NW_004457390.1	258383	261880	D	ACA1_164720	join(<258383..258433,258519..258583,258664..258777,258843..259081,259181..259355,259412..259490,259610..259692,259765..259879,259974..260146,260293..260381,260463..260551,260661..260769,260853..260903,260997..261253,261362..261463,261537..261710,261776..>261880)	Acanthamoeba castellanii str. Neff	14916207
ACA1_164730	mRNA	ACA1_164730	NW_004457390.1	262129	263344	D	ACA1_164730	join(<262129..262220,262293..262398,262512..262715,262792..262890,262983..263107,263179..>263344)	Acanthamoeba castellanii str. Neff	14916208
ACA1_164740	mRNA	ACA1_164740	NW_004457390.1	263480	264409	R	ACA1_164740	complement(<263480..>264409)	Acanthamoeba castellanii str. Neff	14916209
ACA1_164750	mRNA	ACA1_164750	NW_004457390.1	264624	266036	R	ACA1_164750	complement(join(<264624..264700,264798..264917,264977..265077,265161..265255,265347..265441,265518..265699,265772..265837,265906..>266036))	Acanthamoeba castellanii str. Neff	14916210
ACA1_164760	mRNA	ACA1_164760	NW_004457390.1	267247	269223	D	ACA1_164760	join(<267247..267583,267654..268473,268559..268604,268670..268735,268825..269004,269068..>269223)	Acanthamoeba castellanii str. Neff	14916211
ACA1_164770	mRNA	ACA1_164770	NW_004457390.1	269656	271982	D	ACA1_164770	join(<269656..269729,269887..270026,270118..270808,270890..271001,271086..271268,271356..>271982)	Acanthamoeba castellanii str. Neff	14916212
ACA1_164780	mRNA	ACA1_164780	NW_004457390.1	272891	284403	D	ACA1_164780	join(<272891..273027,273141..273187,273330..273448,273574..273651,273733..273882,273996..274194,274295..274449,274527..274872,274959..275059,275155..275386,275490..275608,275692..275850,275922..276032,276141..276422,276492..276653,276730..277075,277202..277599,277685..277859,277968..278110,278148..278307,278396..278503,278587..278819,278895..279137,279245..279361,279461..279567,279669..279804,279883..279946,280042..280194,280288..280409,280493..280840,280970..281263,281366..281594,281690..282212,282341..282494,282603..282953,283045..283386,283465..283683,283775..283966,284047..284122,284186..>284403)	Acanthamoeba castellanii str. Neff	14916213
ACA1_164790	mRNA	ACA1_164790	NW_004457390.1	284666	285771	D	ACA1_164790	join(<284666..284759,284880..284939,285015..285094,285219..285301,285386..285590,285691..>285771)	Acanthamoeba castellanii str. Neff	14916214
ACA1_164800	mRNA	ACA1_164800	NW_004457390.1	288102	288855	R	ACA1_164800	complement(join(<288102..288215,288317..288734,288821..>288855))	Acanthamoeba castellanii str. Neff	14916215
ACA1_164810	mRNA	ACA1_164810	NW_004457390.1	289911	291753	D	ACA1_164810	join(<289911..290034,290109..290990,291081..291544,291625..>291753)	Acanthamoeba castellanii str. Neff	14916216
ACA1_164820	mRNA	ACA1_164820	NW_004457390.1	291993	292324	R	ACA1_164820	complement(join(<291993..292186,292249..>292324))	Acanthamoeba castellanii str. Neff	14916217
ACA1_164840	mRNA	ACA1_164840	NW_004457390.1	296514	298694	R	ACA1_164840	complement(join(<296514..296681,296776..296852,296930..297057,297220..297389,297456..297756,297879..298065,298194..298334,298436..298475,298590..>298694))	Acanthamoeba castellanii str. Neff	14916219
ACA1_164850	mRNA	ACA1_164850	NW_004457390.1	298823	299865	D	ACA1_164850	join(<298823..298906,298974..299150,299243..299339,299462..299716,299786..>299865)	Acanthamoeba castellanii str. Neff	14916220
ACA1_164860	mRNA	ACA1_164860	NW_004457390.1	299911	300822	R	ACA1_164860	complement(join(<299911..300223,300343..300422,300509..300556,300632..300704,300791..>300822))	Acanthamoeba castellanii str. Neff	14916221
ACA1_164870	mRNA	ACA1_164870	NW_004457390.1	301236	302660	R	ACA1_164870	complement(join(<301236..301418,301516..301651,301766..301920,302224..302301,302373..302497,302564..>302660))	Acanthamoeba castellanii str. Neff	14916222
ACA1_164880	mRNA	ACA1_164880	NW_004457390.1	302773	303482	R	ACA1_164880	complement(join(<302773..302978,303065..303194,303263..303411,303476..>303482))	Acanthamoeba castellanii str. Neff	14916223
ACA1_164890	mRNA	ACA1_164890	NW_004457390.1	303975	304556	R	ACA1_164890	complement(<303975..>304556)	Acanthamoeba castellanii str. Neff	14916224
ACA1_164900	mRNA	ACA1_164900	NW_004457390.1	304679	307985	R	ACA1_164900	complement(join(<304679..304911,305008..305191,305286..306189,306299..306381,306460..306601,306712..>307985))	Acanthamoeba castellanii str. Neff	14916225
ACA1_164910	mRNA	ACA1_164910	NW_004457390.1	308637	311184	R	ACA1_164910	complement(join(<308637..308734,308818..308905,308977..309023,309118..309590,309662..309861,309965..310377,310445..310487,310556..310627,310735..>311184))	Acanthamoeba castellanii str. Neff	14916226
ACA1_164920	mRNA	ACA1_164920	NW_004457390.1	311647	312564	R	ACA1_164920	complement(join(<311647..311774,311846..311932,312120..312227,312292..312405,312468..>312564))	Acanthamoeba castellanii str. Neff	14916243
ACA1_164930	mRNA	ACA1_164930	NW_004457390.1	312672	314519	R	ACA1_164930	complement(<312672..>314519)	Acanthamoeba castellanii str. Neff	14916244
ACA1_164940	mRNA	ACA1_164940	NW_004457390.1	314796	317282	R	ACA1_164940	complement(join(<314796..314925,315022..315149,315260..315315,315414..315543,315623..315721,315796..315910,316034..316165,316264..316364,316544..316690,316781..316856,316926..317008,317066..317082,317171..>317282))	Acanthamoeba castellanii str. Neff	14916245
ACA1_164950	mRNA	ACA1_164950	NW_004457390.1	317494	318711	R	ACA1_164950	complement(<317494..>318711)	Acanthamoeba castellanii str. Neff	14916246
ACA1_164960	mRNA	ACA1_164960	NW_004457390.1	319256	320142	R	ACA1_164960	complement(join(<319256..319368,319448..319523,319581..319663,319737..319855,319894..319910,319945..>320142))	Acanthamoeba castellanii str. Neff	14916247
ACA1_164970	mRNA	ACA1_164970	NW_004457390.1	320261	320530	R	ACA1_164970	complement(join(<320261..320298,320365..>320530))	Acanthamoeba castellanii str. Neff	14916248
ACA1_164980	mRNA	ACA1_164980	NW_004457390.1	320814	322904	D	ACA1_164980	join(<320814..320879,320966..321254,321352..321545,321629..321709,321858..321941,322037..322269,322346..322591,322709..>322904)	Acanthamoeba castellanii str. Neff	14916249
ACA1_067270	mRNA	ACA1_067270	NW_004457389.1	1720	2843	D	ACA1_067270	join(<1720..1803,1867..1935,1994..2101,2205..2302,2384..2430,2572..2702,2780..>2843)	Acanthamoeba castellanii str. Neff	14916131
ACA1_067380	mRNA	ACA1_067380	NW_004457389.1	4865	6272	R	ACA1_067380	complement(join(<4865..5061,5141..5398,5441..5739,5817..5951,6094..>6272))	Acanthamoeba castellanii str. Neff	14916143
ACA1_067390	mRNA	ACA1_067390	NW_004457389.1	6797	13957	R	ACA1_067390	complement(join(<6797..6991,7105..7206,7284..7405,7516..7688,7860..7930,8038..8274,8339..8486,8588..8709,8881..8961,9064..9132,9227..9359,9464..9673,9754..9848,9985..10053,10274..10375,10484..10591,10711..10791,10885..11019,11114..11258,11354..11465,11550..11643,11791..11905,12021..12251,12337..12398,12480..12523,12628..12798,12879..12999,13190..>13957))	Acanthamoeba castellanii str. Neff	14916132
ACA1_067400	mRNA	ACA1_067400	NW_004457389.1	14195	16434	D	ACA1_067400	join(<14195..14227,14300..14434,14570..14720,14885..15086,15204..15398,15547..15697,15800..15929,16053..16183,16318..>16434)	Acanthamoeba castellanii str. Neff	14916135
ACA1_067410	mRNA	ACA1_067410	NW_004457389.1	16540	20473	R	ACA1_067410	complement(join(<16540..16872,16983..17458,17542..17627,17717..17806,17956..18019,18107..18317,18410..18534,18602..18702,18805..18907,18981..19084,19190..19296,19383..19463,19554..19699,19790..19887,20016..20097,20178..20340,20438..>20473))	Acanthamoeba castellanii str. Neff	14916133
ACA1_067420	mRNA	ACA1_067420	NW_004457389.1	20727	21222	D	ACA1_067420	join(<20727..20781,20873..21045,21133..>21222)	Acanthamoeba castellanii str. Neff	14916134
ACA1_067430	mRNA	ACA1_067430	NW_004457389.1	21300	23484	R	ACA1_067430	complement(join(<21300..22180,22259..22322,22424..22501,22575..22736,22796..22873,22964..23054,23158..23294,23377..>23484))	Acanthamoeba castellanii str. Neff	14916141
ACA1_067440	mRNA	ACA1_067440	NW_004457389.1	23882	29967	R	ACA1_067440	complement(join(<23882..24130,24216..25336,25400..25523,25601..26122,26211..26615,26677..26757,26843..26939,27022..27256,27325..27416,27484..27613,27687..27771,27852..27938,28017..28141,28229..28391,28473..28663,29034..29185,29281..29540,29606..29680,29749..29823,29905..>29967))	Acanthamoeba castellanii str. Neff	14916142
ACA1_067450	mRNA	ACA1_067450	NW_004457389.1	32369	33406	R	ACA1_067450	complement(join(<32369..32493,32567..32647,32709..32883,32964..33058,33127..>33406))	Acanthamoeba castellanii str. Neff	14916136
ACA1_067460	mRNA	ACA1_067460	NW_004457389.1	33557	34671	R	ACA1_067460	complement(join(<33557..33815,33894..34063,34200..34270,34383..>34671))	Acanthamoeba castellanii str. Neff	14916137
ACA1_067470	mRNA	ACA1_067470	NW_004457389.1	34803	35086	R	ACA1_067470	complement(join(<34803..34845,34914..>35086))	Acanthamoeba castellanii str. Neff	14916138
ACA1_067480	mRNA	ACA1_067480	NW_004457389.1	35708	38014	D	ACA1_067480	join(<35708..35859,35887..36241,36377..36519,36583..36639,36714..36897,36971..37219,37294..37383,37548..37680,37760..>38014)	Acanthamoeba castellanii str. Neff	14916139
ACA1_067590	mRNA	ACA1_067590	NW_004457389.1	39561	40888	D	ACA1_067590	join(<39561..39695,39757..39895,39998..40106,40140..40269,40328..40405,40451..40660,40730..>40888)	Acanthamoeba castellanii str. Neff	14916140
ACA1_000530	mRNA	ACA1_000530	NW_004457387.1	63	2749	D	ACA1_000530	join(<63..452,537..627,696..797,908..1506,1638..2168,2241..2403,2480..2589,2693..>2749)	Acanthamoeba castellanii str. Neff	14916126
ACA1_000540	mRNA	ACA1_000540	NW_004457387.1	2815	3261	D	ACA1_000540	<2815..>3261	Acanthamoeba castellanii str. Neff	14916124
ACA1_000550	mRNA	ACA1_000550	NW_004457387.1	3858	5040	D	ACA1_000550	join(<3858..4094,4200..4334,4457..4841,4949..>5040)	Acanthamoeba castellanii str. Neff	14916125
ACA1_000560	mRNA	ACA1_000560	NW_004457387.1	5394	6239	D	ACA1_000560	<5394..>6239	Acanthamoeba castellanii str. Neff	14916127
ACA1_000570	mRNA	ACA1_000570	NW_004457387.1	6346	7444	D	ACA1_000570	join(<6346..6825,6946..7056,7121..7228,7327..7363,7389..>7444)	Acanthamoeba castellanii str. Neff	14916128
ACA1_000580	mRNA	ACA1_000580	NW_004457387.1	7505	9844	R	ACA1_000580	complement(join(<7505..7902,7989..8071,8156..8259,8350..8450,8553..8614,8772..8876,9026..9219,9326..9636,9820..>9844))	Acanthamoeba castellanii str. Neff	14916129
ACA1_000590	mRNA	ACA1_000590	NW_004457387.1	10533	13091	D	ACA1_000590	join(<10533..11358,11433..11557,11657..11711,11814..11968,12059..12192,12286..12407,12500..12596,12671..12817,12896..>13091)	Acanthamoeba castellanii str. Neff	14916130
ACA1_340040	mRNA	ACA1_340040	NW_004457386.1	8	3394	R	ACA1_340040	complement(join(<8..844,911..1161,1460..1555,1627..1821,1896..2096,2608..2692,2798..2958,3043..3340,3374..>3394))	Acanthamoeba castellanii str. Neff	14916102
ACA1_340350	mRNA	ACA1_340350	NW_004457386.1	6473	8102	R	ACA1_340350	complement(join(<6473..6629,6709..6781,6855..6921,7020..7169,7253..7372,7486..7591,7694..7769,7925..>8102))	Acanthamoeba castellanii str. Neff	14916107
ACA1_340460	mRNA	ACA1_340460	NW_004457386.1	9571	10708	R	ACA1_340460	complement(join(<9571..9633,9730..9831,9956..10039,10127..10237,10310..10439,10542..>10708))	Acanthamoeba castellanii str. Neff	14916108
ACA1_340470	mRNA	ACA1_340470	NW_004457386.1	10822	11905	R	ACA1_340470	complement(join(<10822..11015,11230..11243,11360..11435,11587..>11905))	Acanthamoeba castellanii str. Neff	14916109
ACA1_340680	mRNA	ACA1_340680	NW_004457386.1	13929	14921	R	ACA1_340680	complement(join(<13929..13981,14065..14275,14356..14430,14518..14621,14703..14786,14858..>14921))	Acanthamoeba castellanii str. Neff	14916110
ACA1_340790	mRNA	ACA1_340790	NW_004457386.1	16122	19929	D	ACA1_340790	join(<16122..16153,16269..16477,16639..17099,18245..18357,18435..18518,18632..18840,18912..19087,19180..19371,19480..19611,19744..>19929)	Acanthamoeba castellanii str. Neff	14916111
ACA1_340900	mRNA	ACA1_340900	NW_004457386.1	20155	21484	R	ACA1_340900	complement(join(<20155..20408,20481..20673,20773..20891,21018..21056,21148..21258,21466..>21484))	Acanthamoeba castellanii str. Neff	14916112
ACA1_340910	mRNA	ACA1_340910	NW_004457386.1	22085	27093	R	ACA1_340910	complement(join(<22085..22402,22496..22574,22674..22965,23112..23243,23327..23482,23576..23649,23741..23954,24084..24246,24387..24539,24624..24721,24833..25025,25111..25476,25570..25863,25989..26230,26329..26425,26512..>27093))	Acanthamoeba castellanii str. Neff	14916113
ACA1_340920	mRNA	ACA1_340920	NW_004457386.1	27752	37067	D	ACA1_340920	join(<27752..27863,27958..28042,28055..28068,28183..28721,28949..29073,29085..29253,29404..29527,29719..29790,29877..30011,30086..30158,30229..30346,30463..30546,30635..30778,30866..31225,31316..31379,31456..31820,31880..31964,32032..32154,32245..32363,32455..32594,32682..32805,32886..33038,33138..33290,33376..33488,33559..33646,33728..34047,35858..>37067)	Acanthamoeba castellanii str. Neff	14916114
ACA1_341030	mRNA	ACA1_341030	NW_004457386.1	37426	39527	D	ACA1_341030	join(<37426..37569,37709..37853,37988..38157,38275..38415,38490..38575,38670..38752,38840..38954,39047..39156,39248..39363,39462..>39527)	Acanthamoeba castellanii str. Neff	14916115
ACA1_341040	mRNA	ACA1_341040	NW_004457386.1	39577	40002	R	ACA1_341040	complement(<39577..>40002)	Acanthamoeba castellanii str. Neff	14916116
ACA1_341050	mRNA	ACA1_341050	NW_004457386.1	40253	40600	D	ACA1_341050	join(<40253..40399,40460..>40600)	Acanthamoeba castellanii str. Neff	14916117
ACA1_341060	mRNA	ACA1_341060	NW_004457386.1	40788	44191	R	ACA1_341060	complement(join(<40788..41362,41441..41905,42061..42358,42459..42628,42705..42817,42950..43557,43710..43880,43997..>44191))	Acanthamoeba castellanii str. Neff	14916118
ACA1_341070	mRNA	ACA1_341070	NW_004457386.1	44504	45997	R	ACA1_341070	complement(join(<44504..44698,44812..44919,45013..45102,45182..45270,45349..45462,45683..45760,45925..>45997))	Acanthamoeba castellanii str. Neff	14916119
ACA1_341080	mRNA	ACA1_341080	NW_004457386.1	46037	47297	D	ACA1_341080	join(<46037..46064,46191..46323,46439..46511,46582..46699,46786..>47297)	Acanthamoeba castellanii str. Neff	14916120
ACA1_341090	mRNA	ACA1_341090	NW_004457386.1	47503	49174	R	ACA1_341090	complement(join(<47503..47616,47703..48244,48330..48603,48684..48788,48899..>49174))	Acanthamoeba castellanii str. Neff	14916121
ACA1_341100	mRNA	ACA1_341100	NW_004457386.1	49487	51501	R	ACA1_341100	complement(join(<49487..50207,50295..50410,50482..50566,50666..50745,50811..50938,51068..51173,51240..51340,51405..>51501))	Acanthamoeba castellanii str. Neff	14916122
ACA1_341110	mRNA	ACA1_341110	NW_004457386.1	51763	53951	R	ACA1_341110	complement(join(<51763..52090,52183..52301,52382..52479,52546..52700,52767..52949,53158..53296,53376..53533,53623..>53951))	Acanthamoeba castellanii str. Neff	14916123
ACA1_341120	mRNA	ACA1_341120	NW_004457386.1	54560	56788	R	ACA1_341120	complement(join(<54560..54661,54740..54927,54995..55375,55463..55605,55681..55750,55827..55919,56009..56120,56164..56374,56565..56648,56727..>56788))	Acanthamoeba castellanii str. Neff	14916103
ACA1_341230	mRNA	ACA1_341230	NW_004457386.1	59976	60236	R	ACA1_341230	complement(<59976..>60236)	Acanthamoeba castellanii str. Neff	14916104
ACA1_341340	mRNA	ACA1_341340	NW_004457386.1	61064	62306	R	ACA1_341340	complement(join(<61064..61284,61401..61479,61803..>62306))	Acanthamoeba castellanii str. Neff	14916105
ACA1_309300	mRNA	ACA1_309300	NW_004457385.1	72	2167	D	ACA1_309300	join(<72..514,626..727,819..937,1026..1744,1830..1963,2029..>2167)	Acanthamoeba castellanii str. Neff	14916097
ACA1_309310	mRNA	ACA1_309310	NW_004457385.1	2380	4042	D	ACA1_309310	join(<2380..2638,2721..2858,3100..3163,3263..3382,3458..3597,3679..3806,3884..>4042)	Acanthamoeba castellanii str. Neff	14916098
ACA1_309320	mRNA	ACA1_309320	NW_004457385.1	4140	5513	R	ACA1_309320	complement(join(<4140..4271,4364..4461,4528..4666,4764..4894,4962..5179,5267..5327,5399..>5513))	Acanthamoeba castellanii str. Neff	14916100
ACA1_309330	mRNA	ACA1_309330	NW_004457385.1	5582	6072	R	ACA1_309330	complement(join(<5582..5719,5782..>6072))	Acanthamoeba castellanii str. Neff	14916101
ACA1_309340	mRNA	ACA1_309340	NW_004457385.1	6116	7327	D	ACA1_309340	join(<6116..6222,6286..6371,6448..6495,6560..6648,6722..6843,6924..6970,7039..7170,7242..>7327)	Acanthamoeba castellanii str. Neff	14916099
ACA1_309350	mRNA	ACA1_309350	NW_004457385.1	8655	10547	D	ACA1_309350	join(<8655..8918,9004..9171,9269..9574,9651..>10547)	Acanthamoeba castellanii str. Neff	14916094
ACA1_309360	mRNA	ACA1_309360	NW_004457385.1	10677	12955	R	ACA1_309360	complement(join(<10677..10897,10956..11456,11536..11635,11695..11816,11906..11988,12071..12173,12250..12370,12450..12512,12671..12807,12838..>12955))	Acanthamoeba castellanii str. Neff	14916095
ACA1_309370	mRNA	ACA1_309370	NW_004457385.1	13465	14537	R	ACA1_309370	complement(join(<13465..13856,13940..14065,14170..14297,14398..>14537))	Acanthamoeba castellanii str. Neff	14916096
ACA1_275380	mRNA	ACA1_275380	NW_004457384.1	158	1696	D	ACA1_275380	join(<158..443,530..616,735..841,940..1000,1074..>1696)	Acanthamoeba castellanii str. Neff	14916007
ACA1_275390	mRNA	ACA1_275390	NW_004457384.1	2200	4826	D	ACA1_275390	join(<2200..2313,2586..4169,4200..>4826)	Acanthamoeba castellanii str. Neff	14916008
ACA1_275400	mRNA	ACA1_275400	NW_004457384.1	5299	11787	R	ACA1_275400	complement(join(<5299..5604,5676..5798,5915..5973,6053..6218,6347..6469,6544..6702,6802..6945,7074..7153,7249..7317,7374..7485,7572..7695,7796..7929,8049..8145,8238..8373,8471..8621,8763..8936,9086..9242,9317..9418,9465..9482,9589..9692,9766..9842,9929..10087,10172..10400,10495..10624,10710..10824,10916..11024,11145..11338,11420..11495,11677..>11787))	Acanthamoeba castellanii str. Neff	14915999
ACA1_275410	mRNA	ACA1_275410	NW_004457384.1	12036	14092	R	ACA1_275410	complement(join(<12036..12217,12332..12493,12603..12809,12911..13009,13188..13290,13373..13611,13732..13918,13994..>14092))	Acanthamoeba castellanii str. Neff	14916000
ACA1_275420	mRNA	ACA1_275420	NW_004457384.1	14295	15410	R	ACA1_275420	complement(join(<14295..14426,14546..14767,14854..15310,15340..>15410))	Acanthamoeba castellanii str. Neff	14916001
ACA1_275430	mRNA	ACA1_275430	NW_004457384.1	15560	18327	R	ACA1_275430	complement(join(<15560..15570,15800..15857,15949..16199,16308..16404,16506..16807,16904..17039,17150..17427,17534..17662,17855..17993,18119..18197,18296..>18327))	Acanthamoeba castellanii str. Neff	14916035
ACA1_275440	mRNA	ACA1_275440	NW_004457384.1	19049	20316	D	ACA1_275440	join(<19049..19168,19231..19283,19365..19557,19631..19735,19830..19976,20036..20143,20215..>20316)	Acanthamoeba castellanii str. Neff	14916036
ACA1_275450	mRNA	ACA1_275450	NW_004457384.1	20627	21349	R	ACA1_275450	complement(join(<20627..21059,21118..21157,21241..>21349))	Acanthamoeba castellanii str. Neff	14916037
ACA1_275460	mRNA	ACA1_275460	NW_004457384.1	22014	23921	R	ACA1_275460	complement(join(<22014..22830,22924..23171,23287..23763,23862..>23921))	Acanthamoeba castellanii str. Neff	14916038
ACA1_275470	mRNA	ACA1_275470	NW_004457384.1	24914	25639	D	ACA1_275470	join(<24914..25017,25085..25188,25275..25392,25504..>25639)	Acanthamoeba castellanii str. Neff	14916039
ACA1_275480	mRNA	ACA1_275480	NW_004457384.1	25761	26518	R	ACA1_275480	complement(join(<25761..26032,26104..26340,26440..>26518))	Acanthamoeba castellanii str. Neff	14916040
ACA1_275490	mRNA	ACA1_275490	NW_004457384.1	26631	30498	D	ACA1_275490	join(<26631..26693,26782..26956,27006..27050,27121..27197,27320..27362,27385..27527,27628..27702,27800..27881,27948..28090,28184..28329,28457..28606,28750..28907,29005..29311,29409..29556,29639..29716,29758..>30498)	Acanthamoeba castellanii str. Neff	14916041
ACA1_275500	mRNA	ACA1_275500	NW_004457384.1	31055	33621	D	ACA1_275500	join(<31055..31097,31215..31361,31465..31619,31739..31832,31935..32056,32196..32299,32454..32517,32651..32755,32865..32943,33027..33227,33344..>33621)	Acanthamoeba castellanii str. Neff	14916026
ACA1_275510	mRNA	ACA1_275510	NW_004457384.1	33690	35483	D	ACA1_275510	join(<33690..33975,34111..34196,34313..34500,34582..34675,34839..35001,35083..35214,35290..>35483)	Acanthamoeba castellanii str. Neff	14916027
ACA1_275520	mRNA	ACA1_275520	NW_004457384.1	35628	35830	R	ACA1_275520	complement(join(<35628..35660,35678..>35830))	Acanthamoeba castellanii str. Neff	14916028
ACA1_275530	mRNA	ACA1_275530	NW_004457384.1	37162	39562	R	ACA1_275530	complement(join(<37162..37277,37410..37461,37485..37597,37733..37858,37941..38023,38081..38178,38265..38414,38504..38615,38785..38980,39072..39168,39272..>39562))	Acanthamoeba castellanii str. Neff	14916029
ACA1_275540	mRNA	ACA1_275540	NW_004457384.1	39756	40846	R	ACA1_275540	complement(join(<39756..39909,40082..40320,40355..40595,40621..40710,40785..>40846))	Acanthamoeba castellanii str. Neff	14916030
ACA1_275550	mRNA	ACA1_275550	NW_004457384.1	40919	41144	R	ACA1_275550	complement(join(<40919..41082,41105..>41144))	Acanthamoeba castellanii str. Neff	14916031
ACA1_275560	mRNA	ACA1_275560	NW_004457384.1	41321	42927	R	ACA1_275560	complement(join(<41321..41641,41944..42055,42146..42341,42433..42529,42637..>42927))	Acanthamoeba castellanii str. Neff	14916032
ACA1_275570	mRNA	ACA1_275570	NW_004457384.1	43003	44849	R	ACA1_275570	complement(join(<43003..43370,43457..43520,43586..43650,43733..43873,43957..44084,44191..44316,44375..44441,44747..>44849))	Acanthamoeba castellanii str. Neff	14916033
ACA1_275580	mRNA	ACA1_275580	NW_004457384.1	45051	46905	D	ACA1_275580	join(<45051..45776,45923..46001,46105..46200,46337..46382,46515..>46905)	Acanthamoeba castellanii str. Neff	14916034
ACA1_275590	mRNA	ACA1_275590	NW_004457384.1	46991	48290	R	ACA1_275590	complement(join(<46991..47137,47234..47313,47372..47477,47562..47637,47778..47887,47980..48098,48227..>48290))	Acanthamoeba castellanii str. Neff	14916070
ACA1_275600	mRNA	ACA1_275600	NW_004457384.1	49260	50373	D	ACA1_275600	join(<49260..49591,49698..49944,50016..50134,50208..>50373)	Acanthamoeba castellanii str. Neff	14916071
ACA1_275610	mRNA	ACA1_275610	NW_004457384.1	51517	52888	R	ACA1_275610	complement(join(<51517..51565,51672..51923,52010..52095,52169..52414,52517..>52888))	Acanthamoeba castellanii str. Neff	14916072
ACA1_275620	mRNA	ACA1_275620	NW_004457384.1	54253	67900	R	ACA1_275620	complement(join(<54253..54623,54676..54683,54712..54820,54906..55587,55690..55961,56066..56267,56385..56744,56860..57165,57275..57475,57586..57759,57859..57972,58070..58333,58390..58650,58720..58942,59023..59225,59305..59581,59873..60045,60140..60260,60341..60786,60866..60922,60997..61252,61327..61511,61590..62306,62391..62616,62693..62805,62876..62956,63054..63267,63369..63638,63732..63859,63919..64017,64133..64315,64391..64487,64580..64746,64835..64996,65080..65164,65249..65370,65481..65683,65811..66000,66104..66291,66397..66500,66846..67018,67144..67584,67757..>67900))	Acanthamoeba castellanii str. Neff	14916073
ACA1_275630	mRNA	ACA1_275630	NW_004457384.1	68056	70301	R	ACA1_275630	complement(join(<68056..68122,68215..68332,68412..68511,68646..68762,68870..68941,69032..69098,69182..69263,69374..69503,69678..69798,69923..70121,70205..>70301))	Acanthamoeba castellanii str. Neff	14916074
ACA1_275640	mRNA	ACA1_275640	NW_004457384.1	70881	73113	R	ACA1_275640	complement(join(<70881..70927,71021..71123,71261..71381,71495..71603,71691..71884,71977..72122,72221..72335,72426..72615,72740..72838,72951..>73113))	Acanthamoeba castellanii str. Neff	14916075
ACA1_275650	mRNA	ACA1_275650	NW_004457384.1	74267	76960	D	ACA1_275650	join(<74267..74424,74580..74625,74770..74913,75031..75203,75313..75412,75492..75561,75664..76319,76404..76474,76564..76647,76804..>76960)	Acanthamoeba castellanii str. Neff	14916076
ACA1_275660	mRNA	ACA1_275660	NW_004457384.1	77089	81863	D	ACA1_275660	join(<77089..77818,77830..78591,79133..79485,79616..79759,79857..80032,80140..80357,80501..80646,80809..80886,81011..81110,81224..81307,81403..81604,81653..>81863)	Acanthamoeba castellanii str. Neff	14916077
ACA1_275670	mRNA	ACA1_275670	NW_004457384.1	81993	83347	R	ACA1_275670	complement(join(<81993..82349,82492..82815,82943..83104,83135..>83347))	Acanthamoeba castellanii str. Neff	14916042
ACA1_275680	mRNA	ACA1_275680	NW_004457384.1	83632	85516	R	ACA1_275680	complement(join(<83632..83781,83950..84153,84272..84338,84473..84638,84794..84891,84989..85036,85127..85268,85378..>85516))	Acanthamoeba castellanii str. Neff	14916043
ACA1_275690	mRNA	ACA1_275690	NW_004457384.1	85912	88681	D	ACA1_275690	join(<85912..86177,86275..87466,87494..87565,87632..>88681)	Acanthamoeba castellanii str. Neff	14916044
ACA1_275700	mRNA	ACA1_275700	NW_004457384.1	88874	89904	R	ACA1_275700	complement(join(<88874..88894,88982..89108,89225..89673,89773..>89904))	Acanthamoeba castellanii str. Neff	14916045
ACA1_275710	mRNA	ACA1_275710	NW_004457384.1	90011	91997	D	ACA1_275710	join(<90011..90098,90168..90293,90398..91027,91127..91244,91268..91343,91425..>91997)	Acanthamoeba castellanii str. Neff	14916046
ACA1_275720	mRNA	ACA1_275720	NW_004457384.1	92277	94014	D	ACA1_275720	join(<92277..92471,92606..92727,92793..93175,93262..93371,93448..93579,93649..>94014)	Acanthamoeba castellanii str. Neff	14916047
ACA1_275730	mRNA	ACA1_275730	NW_004457384.1	94176	95129	R	ACA1_275730	complement(join(<94176..94402,94479..94779,94856..94945,95037..>95129))	Acanthamoeba castellanii str. Neff	14916048
ACA1_275740	mRNA	ACA1_275740	NW_004457384.1	95983	97950	D	ACA1_275740	join(<95983..96089,96162..96236,96319..96436,96560..96731,96769..96855,96952..97013,97076..97167,97236..97343,97413..97494,97575..97635,97753..97825,97878..>97950)	Acanthamoeba castellanii str. Neff	14916049
ACA1_275750	mRNA	ACA1_275750	NW_004457384.1	98205	100886	R	ACA1_275750	complement(join(<98205..98245,98330..98538,98657..98713,98820..98875,98973..99069,99162..99228,99315..99791,99882..99935,100184..100258,100426..100613,100645..>100886))	Acanthamoeba castellanii str. Neff	14916050
ACA1_275760	mRNA	ACA1_275760	NW_004457384.1	102126	103566	R	ACA1_275760	complement(join(<102126..102904,103057..103140,103326..>103566))	Acanthamoeba castellanii str. Neff	14916051
ACA1_275770	mRNA	ACA1_275770	NW_004457384.1	103727	105717	R	ACA1_275770	complement(join(<103727..103930,104071..104135,104278..104440,104508..104630,104777..104869,104939..105002,105130..105292,105430..105480,105547..105627,105693..>105717))	Acanthamoeba castellanii str. Neff	14916052
ACA1_275780	mRNA	ACA1_275780	NW_004457384.1	105864	106665	D	ACA1_275780	join(<105864..106254,106466..>106665)	Acanthamoeba castellanii str. Neff	14916053
ACA1_275790	mRNA	ACA1_275790	NW_004457384.1	106839	110613	R	ACA1_275790	complement(join(<106839..107465,107524..107813,107960..108229,108384..108595,108707..108807,108899..109296,109387..109479,109625..109697,109942..109983,110109..110202,110262..110374,110548..>110613))	Acanthamoeba castellanii str. Neff	14916078
ACA1_275800	mRNA	ACA1_275800	NW_004457384.1	110728	111375	R	ACA1_275800	complement(join(<110728..110811,110948..111030,111111..111213,111307..>111375))	Acanthamoeba castellanii str. Neff	14916079
ACA1_275810	mRNA	ACA1_275810	NW_004457384.1	111852	117260	R	ACA1_275810	complement(join(<111852..111893,112064..112211,112307..112486,112641..112846,112938..113641,113728..113902,113989..114084,114254..114360,114479..114613,114735..114848,115011..115139,115235..115405,115543..115976,116095..116213,116421..>117260))	Acanthamoeba castellanii str. Neff	14916080
ACA1_275820	mRNA	ACA1_275820	NW_004457384.1	117451	120000	R	ACA1_275820	complement(join(<117451..117597,117711..117812,117921..118052,118143..118239,118329..118426,118809..118936,119032..119087,119179..119249,119381..119459,119570..119666,119865..>120000))	Acanthamoeba castellanii str. Neff	14916081
ACA1_275830	mRNA	ACA1_275830	NW_004457384.1	120422	123272	D	ACA1_275830	join(<120422..120918,121031..121221,121448..121570,121693..121821,121928..122050,122225..122350,122486..122608,122881..123003,123148..>123272)	Acanthamoeba castellanii str. Neff	14916082
ACA1_275940	mRNA	ACA1_275940	NW_004457384.1	123457	124506	D	ACA1_275940	join(<123457..123646,123746..123905,124185..>124506)	Acanthamoeba castellanii str. Neff	14916083
ACA1_275960	mRNA	ACA1_275960	NW_004457384.1	127609	128472	R	ACA1_275960	complement(join(<127609..127758,128068..>128472))	Acanthamoeba castellanii str. Neff	14916085
ACA1_276070	mRNA	ACA1_276070	NW_004457384.1	128715	129458	R	ACA1_276070	complement(join(<128715..128904,129150..129382,129426..>129458))	Acanthamoeba castellanii str. Neff	14916086
ACA1_276080	mRNA	ACA1_276080	NW_004457384.1	129634	131572	D	ACA1_276080	join(<129634..129701,129989..130061,130301..130388,130732..130777,130858..130910,131111..131188,131278..131407,131494..>131572)	Acanthamoeba castellanii str. Neff	14916087
ACA1_276090	mRNA	ACA1_276090	NW_004457384.1	131682	136796	R	ACA1_276090	complement(join(<131682..131914,132047..132449,132637..132726,132798..132863,133051..133161,133351..133569,133859..134026,134293..134338,134382..136059,136178..>136796))	Acanthamoeba castellanii str. Neff	14916088
ACA1_276100	mRNA	ACA1_276100	NW_004457384.1	139016	139566	R	ACA1_276100	complement(join(<139016..139089,139230..139434,139439..>139566))	Acanthamoeba castellanii str. Neff	14916089
ACA1_276210	mRNA	ACA1_276210	NW_004457384.1	140372	142260	D	ACA1_276210	join(<140372..140635,140720..140860,140968..141203,141282..141344,141505..141605,141688..141829,141895..142069,142135..>142260)	Acanthamoeba castellanii str. Neff	14916090
ACA1_276320	mRNA	ACA1_276320	NW_004457384.1	146500	146805	D	ACA1_276320	join(<146500..146610,146680..>146805)	Acanthamoeba castellanii str. Neff	14916091
ACA1_276330	mRNA	ACA1_276330	NW_004457384.1	149000	151507	R	ACA1_276330	complement(join(<149000..149169,149228..149309,149370..149452,149532..149657,149758..149965,150147..150564,150672..>151507))	Acanthamoeba castellanii str. Neff	14916092
ACA1_276340	mRNA	ACA1_276340	NW_004457384.1	151909	153155	R	ACA1_276340	complement(join(<151909..151917,151944..152218,152316..152387,152490..152631,152754..152866,152987..153042,153103..>153155))	Acanthamoeba castellanii str. Neff	14916093
ACA1_276350	mRNA	ACA1_276350	NW_004457384.1	153480	154381	D	ACA1_276350	join(<153480..153539,153610..153761,154360..>154381)	Acanthamoeba castellanii str. Neff	14916054
ACA1_276360	mRNA	ACA1_276360	NW_004457384.1	154565	155710	D	ACA1_276360	join(<154565..154690,154725..154811,155090..155224,155420..155526,155644..>155710)	Acanthamoeba castellanii str. Neff	14916055
ACA1_276370	mRNA	ACA1_276370	NW_004457384.1	155828	158859	R	ACA1_276370	complement(join(<155828..156070,156233..156345,156445..156557,156681..156859,156949..157102,157148..157374,157497..157610,157784..157841,157853..157965,158248..158338,158519..158591,158766..>158859))	Acanthamoeba castellanii str. Neff	14916056
ACA1_276380	mRNA	ACA1_276380	NW_004457384.1	159640	162369	D	ACA1_276380	join(<159640..159660,159690..159793,159906..160021,160105..160197,160241..160363,160729..160822,160930..161051,161176..161277,161392..161475,161603..161668,161846..161980,162146..162206,162309..>162369)	Acanthamoeba castellanii str. Neff	14916057
ACA1_276390	mRNA	ACA1_276390	NW_004457384.1	162454	163903	D	ACA1_276390	join(<162454..162697,162819..162931,163079..163139,163273..163379,163517..>163903)	Acanthamoeba castellanii str. Neff	14916058
ACA1_276400	mRNA	ACA1_276400	NW_004457384.1	164371	166587	R	ACA1_276400	complement(join(<164371..164515,164614..164900,165091..165159,165659..165784,165964..166055,166179..166308,166337..166552,166573..>166587))	Acanthamoeba castellanii str. Neff	14916059
ACA1_276410	mRNA	ACA1_276410	NW_004457384.1	167003	170038	D	ACA1_276410	join(<167003..167050,167161..167196,167305..167410,167495..167647,167842..167946,168120..168233,168365..168454,168581..168829,168997..169097,169206..169266,169375..169469,169553..169688,169815..>170038)	Acanthamoeba castellanii str. Neff	14916060
ACA1_276420	mRNA	ACA1_276420	NW_004457384.1	171327	172824	D	ACA1_276420	join(<171327..171544,171649..171819,171948..172062,172144..172311,172436..172590,172677..>172824)	Acanthamoeba castellanii str. Neff	14916061
ACA1_276440	mRNA	ACA1_276440	NW_004457384.1	177167	180391	D	ACA1_276440	join(<177167..177766,177886..178028,178427..178508,178690..178813,178944..179091,179221..179294,179397..179493,179673..179964,180085..180189,180206..>180391)	Acanthamoeba castellanii str. Neff	14916063
ACA1_276450	mRNA	ACA1_276450	NW_004457384.1	180486	183045	R	ACA1_276450	complement(join(<180486..180855,180915..181625,181768..182162,182427..182491,182661..>183045))	Acanthamoeba castellanii str. Neff	14916064
ACA1_276460	mRNA	ACA1_276460	NW_004457384.1	183532	185578	D	ACA1_276460	join(<183532..183577,183595..183893,183967..184560,184678..184741,184863..184943,185100..185222,185331..>185578)	Acanthamoeba castellanii str. Neff	14916065
ACA1_276470	mRNA	ACA1_276470	NW_004457384.1	185804	188371	R	ACA1_276470	complement(join(<185804..186010,186114..186284,186420..186536,186657..186718,186798..186979,187070..187160,187294..187695,187809..187982,188110..>188371))	Acanthamoeba castellanii str. Neff	14916066
ACA1_276480	mRNA	ACA1_276480	NW_004457384.1	189249	191976	D	ACA1_276480	join(<189249..189356,189436..189519,189617..189729,189991..190059,190229..190299,190443..190554,190674..190769,190882..190946,191038..191123,191233..191346,191428..191561,191636..191744,191893..>191976)	Acanthamoeba castellanii str. Neff	14916067
ACA1_276490	mRNA	ACA1_276490	NW_004457384.1	192583	193571	D	ACA1_276490	join(<192583..192734,192844..192997,193080..193170,193253..193422,193509..>193571)	Acanthamoeba castellanii str. Neff	14916068
ACA1_276610	mRNA	ACA1_276610	NW_004457384.1	196324	198057	D	ACA1_276610	join(<196324..196446,196573..196722,196832..197075,197131..197202,197303..197446,197542..197688,197759..>198057)	Acanthamoeba castellanii str. Neff	14916009
ACA1_276620	mRNA	ACA1_276620	NW_004457384.1	200138	202725	R	ACA1_276620	complement(join(<200138..200490,200580..201171,201252..202276,202353..>202725))	Acanthamoeba castellanii str. Neff	14916010
ACA1_276630	mRNA	ACA1_276630	NW_004457384.1	203021	205632	D	ACA1_276630	join(<203021..203576,203736..204119,204209..204654,204754..204877,204980..>205632)	Acanthamoeba castellanii str. Neff	14916011
ACA1_276640	mRNA	ACA1_276640	NW_004457384.1	205862	206502	R	ACA1_276640	complement(join(<205862..206016,206259..>206502))	Acanthamoeba castellanii str. Neff	14916012
ACA1_276650	mRNA	ACA1_276650	NW_004457384.1	207210	209077	D	ACA1_276650	join(<207210..207247,207401..207859,207946..>209077)	Acanthamoeba castellanii str. Neff	14916013
ACA1_276760	mRNA	ACA1_276760	NW_004457384.1	210541	210819	R	ACA1_276760	complement(<210541..>210819)	Acanthamoeba castellanii str. Neff	14916014
ACA1_276770	mRNA	ACA1_276770	NW_004457384.1	211214	211899	D	ACA1_276770	join(<211214..211410,211509..>211899)	Acanthamoeba castellanii str. Neff	14916015
ACA1_276780	mRNA	ACA1_276780	NW_004457384.1	212030	216417	R	ACA1_276780	complement(join(<212030..212241,212371..212440,212566..212749,212871..213018,213111..213341,213431..213494,213665..213823,213940..214198,214325..214435,214564..214747,214879..214944,215039..215162,215272..215406,215574..215726,215813..215970,216059..216204,216392..>216417))	Acanthamoeba castellanii str. Neff	14916016
ACA1_276790	mRNA	ACA1_276790	NW_004457384.1	217392	219916	D	ACA1_276790	join(<217392..217403,217493..217557,217723..217835,217898..218068,218197..218674,218783..218950,219346..>219916)	Acanthamoeba castellanii str. Neff	14916017
ACA1_276800	mRNA	ACA1_276800	NW_004457384.1	220596	221930	D	ACA1_276800	join(<220596..221464,221606..>221930)	Acanthamoeba castellanii str. Neff	14916018
ACA1_276810	mRNA	ACA1_276810	NW_004457384.1	222271	223958	R	ACA1_276810	complement(join(<222271..223078,223166..223889,223916..>223958))	Acanthamoeba castellanii str. Neff	14916019
ACA1_276820	mRNA	ACA1_276820	NW_004457384.1	225078	226340	D	ACA1_276820	join(<225078..225211,225281..225579,225668..225802,225894..226037,226165..>226340)	Acanthamoeba castellanii str. Neff	14916020
ACA1_276830	mRNA	ACA1_276830	NW_004457384.1	226529	227590	R	ACA1_276830	complement(join(<226529..226611,226709..226739,226839..226921,227002..227065,227144..227206,227327..227427,227497..>227590))	Acanthamoeba castellanii str. Neff	14916021
ACA1_276840	mRNA	ACA1_276840	NW_004457384.1	227971	228237	R	ACA1_276840	complement(<227971..>228237)	Acanthamoeba castellanii str. Neff	14916022
ACA1_276860	mRNA	ACA1_276860	NW_004457384.1	241120	242025	R	ACA1_276860	complement(join(<241120..241256,241377..241478,241549..241604,241715..241786,241877..>242025))	Acanthamoeba castellanii str. Neff	14916024
ACA1_276870	mRNA	ACA1_276870	NW_004457384.1	243147	243819	D	ACA1_276870	join(<243147..243174,243285..243412,243468..243591,243716..>243819)	Acanthamoeba castellanii str. Neff	14916025
ACA1_276880	mRNA	ACA1_276880	NW_004457384.1	243894	244604	R	ACA1_276880	complement(join(<243894..244096,244203..244392,244470..>244604))	Acanthamoeba castellanii str. Neff	14916002
ACA1_276890	mRNA	ACA1_276890	NW_004457384.1	244607	247146	R	ACA1_276890	complement(join(<244607..244813,244938..245082,245181..245329,245410..245735,245827..246355,246477..246546,246653..246755,246828..246894,246979..>247146))	Acanthamoeba castellanii str. Neff	14916003
ACA1_276900	mRNA	ACA1_276900	NW_004457384.1	247373	250221	R	ACA1_276900	complement(join(<247373..247389,247472..247562,247680..247829,247919..248037,248128..248176,248269..248373,248490..248587,248709..248818,248921..249299,249384..249478,249603..249709,249811..249870,249964..>250221))	Acanthamoeba castellanii str. Neff	14916004
ACA1_277010	mRNA	ACA1_277010	NW_004457384.1	253134	253361	D	ACA1_277010	<253134..>253361	Acanthamoeba castellanii str. Neff	14916005
ACA1_277020	mRNA	ACA1_277020	NW_004457384.1	253712	254281	R	ACA1_277020	complement(join(<253712..253817,253943..254078,254204..254220,254235..>254281))	Acanthamoeba castellanii str. Neff	14916006
ACA1_193750	mRNA	ACA1_193750	NW_004457383.1	229	660	R	ACA1_193750	complement(join(<229..281,354..482,615..>660))	Acanthamoeba castellanii str. Neff	14915997
ACA1_193960	mRNA	ACA1_193960	NW_004457383.1	14365	14553	R	ACA1_193960	complement(<14365..>14553)	Acanthamoeba castellanii str. Neff	14915998
ACA1_194170	mRNA	ACA1_194170	NW_004457383.1	29865	31317	D	ACA1_194170	join(<29865..30314,30412..31065,31119..31208,31258..>31317)	Acanthamoeba castellanii str. Neff	14915993
ACA1_194280	mRNA	ACA1_194280	NW_004457383.1	35761	37111	D	ACA1_194280	join(<35761..35780,35878..35945,36065..36176,36341..36442,36549..36663,36752..36836,36942..>37111)	Acanthamoeba castellanii str. Neff	14915994
ACA1_194290	mRNA	ACA1_194290	NW_004457383.1	37397	37738	R	ACA1_194290	complement(join(<37397..37454,37632..>37738))	Acanthamoeba castellanii str. Neff	14915995
ACA1_194400	mRNA	ACA1_194400	NW_004457383.1	41894	42332	D	ACA1_194400	join(<41894..41964,42050..42131,42266..42288,42314..>42332)	Acanthamoeba castellanii str. Neff	14915996
ACA1_328290	mRNA	ACA1_328290	NW_004457382.1	974	1228	D	ACA1_328290	<974..>1228	Acanthamoeba castellanii str. Neff	14915983
ACA1_328400	mRNA	ACA1_328400	NW_004457382.1	4119	5215	D	ACA1_328400	join(<4119..4314,4326..4381,4559..>5215)	Acanthamoeba castellanii str. Neff	14915984
ACA1_328610	mRNA	ACA1_328610	NW_004457382.1	9347	9601	D	ACA1_328610	<9347..>9601	Acanthamoeba castellanii str. Neff	14915985
ACA1_328620	mRNA	ACA1_328620	NW_004457382.1	10503	11388	D	ACA1_328620	join(<10503..10587,10679..>11388)	Acanthamoeba castellanii str. Neff	14915986
ACA1_328630	mRNA	ACA1_328630	NW_004457382.1	11885	15978	D	ACA1_328630	join(<11885..11966,12145..12239,12381..12479,12568..12718,12853..12977,13087..13198,13340..13483,13594..13712,13805..13897,13982..14173,14287..14404,14524..14693,14815..14917,14979..15070,15210..15367,15442..15530,15636..15764,15887..>15978)	Acanthamoeba castellanii str. Neff	14915987
ACA1_328640	mRNA	ACA1_328640	NW_004457382.1	16186	18217	R	ACA1_328640	complement(join(<16186..16330,16429..16517,16638..16796,16903..17115,17189..17434,17517..17660,17750..17907,17998..>18217))	Acanthamoeba castellanii str. Neff	14915988
ACA1_328750	mRNA	ACA1_328750	NW_004457382.1	19690	22871	D	ACA1_328750	join(<19690..20156,20251..20386,20470..20667,20747..20960,20987..21064,21129..21625,21707..21807,21903..22043,22126..22223,22330..>22871)	Acanthamoeba castellanii str. Neff	14915989
ACA1_328760	mRNA	ACA1_328760	NW_004457382.1	23063	24567	D	ACA1_328760	join(<23063..23526,23635..23735,23818..24012,24112..24202,24270..24402,24487..>24567)	Acanthamoeba castellanii str. Neff	14915990
ACA1_328770	mRNA	ACA1_328770	NW_004457382.1	25227	26742	R	ACA1_328770	complement(join(<25227..25604,25688..25823,25893..26003,26077..26234,26315..26515,26602..>26742))	Acanthamoeba castellanii str. Neff	14915991
ACA1_328780	mRNA	ACA1_328780	NW_004457382.1	27424	28456	R	ACA1_328780	complement(join(<27424..28140,28252..28279,28302..>28456))	Acanthamoeba castellanii str. Neff	14915992
ACA1_328790	mRNA	ACA1_328790	NW_004457382.1	29013	30166	R	ACA1_328790	complement(join(<29013..29174,29539..29658,29739..29939,30023..>30166))	Acanthamoeba castellanii str. Neff	14915979
ACA1_328900	mRNA	ACA1_328900	NW_004457382.1	30826	31560	R	ACA1_328900	complement(<30826..>31560)	Acanthamoeba castellanii str. Neff	14915980
ACA1_328910	mRNA	ACA1_328910	NW_004457382.1	31764	34099	R	ACA1_328910	complement(join(<31764..31871,31921..31997,32051..32139,32193..32332,32387..32700,32930..33197,33384..33574,33782..33854,33926..>34099))	Acanthamoeba castellanii str. Neff	14915981
ACA1_328920	mRNA	ACA1_328920	NW_004457382.1	34194	34950	R	ACA1_328920	complement(join(<34194..34222,34551..>34950))	Acanthamoeba castellanii str. Neff	14915982
ACA1_086520	mRNA	ACA1_086520	NW_004457381.1	36	834	R	ACA1_086520	complement(join(<36..206,344..406,476..597,702..>834))	Acanthamoeba castellanii str. Neff	14915971
ACA1_086530	mRNA	ACA1_086530	NW_004457381.1	1014	4174	D	ACA1_086530	join(<1014..1174,1304..1416,1539..1666,1761..1870,3460..3571,3666..3775,3837..3952,4068..>4174)	Acanthamoeba castellanii str. Neff	14915974
ACA1_086640	mRNA	ACA1_086640	NW_004457381.1	4594	6813	D	ACA1_086640	join(<4594..4650,4774..4855,4956..5094,5195..5318,5458..5553,5684..5843,6008..6104,6236..6311,6425..6552,6636..6681,6766..>6813)	Acanthamoeba castellanii str. Neff	14915978
ACA1_086750	mRNA	ACA1_086750	NW_004457381.1	7078	9180	D	ACA1_086750	join(<7078..7440,7504..7593,7701..7845,8000..8206,8304..8605,8772..8892,8965..>9180)	Acanthamoeba castellanii str. Neff	14915977
ACA1_086860	mRNA	ACA1_086860	NW_004457381.1	13010	15577	R	ACA1_086860	complement(join(<13010..13167,13286..13395,13506..13590,13775..13890,14034..14175,14305..14398,14526..14636,14751..14844,15087..15159,15268..15400,15554..>15577))	Acanthamoeba castellanii str. Neff	14915973
ACA1_087070	mRNA	ACA1_087070	NW_004457381.1	21301	22089	R	ACA1_087070	complement(<21301..>22089)	Acanthamoeba castellanii str. Neff	14915975
ACA1_087180	mRNA	ACA1_087180	NW_004457381.1	26131	26614	D	ACA1_087180	join(<26131..26139,26264..26288,26323..26488,26605..>26614)	Acanthamoeba castellanii str. Neff	14915976
ACA1_087190	mRNA	ACA1_087190	NW_004457381.1	26846	29263	D	ACA1_087190	join(<26846..26924,27024..27097,27170..27253,27415..28024,28117..28399,28575..28744,28815..28927,29036..>29263)	Acanthamoeba castellanii str. Neff	14915972
ACA1_210210	mRNA	ACA1_210210	NW_004457380.1	7	2121	R	ACA1_210210	complement(join(<7..138,256..372,461..673,749..906,1010..1099,1220..1619,1798..2007,2089..>2121))	Acanthamoeba castellanii str. Neff	14915604
ACA1_210230	mRNA	ACA1_210230	NW_004457380.1	4333	7979	R	ACA1_210230	complement(join(<4333..4417,4840..4934,5050..5199,5311..5482,5556..5717,5867..6104,6172..6778,6844..7088,7163..7315,7415..>7979))	Acanthamoeba castellanii str. Neff	14915766
ACA1_210240	mRNA	ACA1_210240	NW_004457380.1	8711	14958	R	ACA1_210240	complement(join(<8711..8832,9016..9127,9218..9367,9444..9545,9652..9708,10561..10731,10801..10922,11370..11481,11572..11721,11796..11823,11845..11897,12006..12079,12169..12253,12366..12409,12658..12773,12862..13039,13200..13346,13448..13669,13783..13947,14042..14203,14275..14850,14916..>14958))	Acanthamoeba castellanii str. Neff	14915767
ACA1_210250	mRNA	ACA1_210250	NW_004457380.1	15369	24187	R	ACA1_210250	complement(join(<15369..15506,15595..15734,15836..15947,16022..16123,16213..16422,16539..16761,16842..16990,17072..17189,17281..17385,17465..17601,17684..17901,18010..18235,18315..18470,18553..18713,18794..19146,19232..19305,19420..19492,19596..19750,19835..20177,20263..20462,20555..20684,20885..21300,21406..21708,21983..22072,22178..22480,22701..22902,22975..23063,23141..23289,23363..23533,23614..23731,23875..23952,24044..>24187))	Acanthamoeba castellanii str. Neff	14915710
ACA1_210360	mRNA	ACA1_210360	NW_004457380.1	28807	30845	R	ACA1_210360	complement(join(<28807..28933,29030..29199,29283..29813,29906..30013,30326..30429,30518..30636,30751..>30845))	Acanthamoeba castellanii str. Neff	14915685
ACA1_210370	mRNA	ACA1_210370	NW_004457380.1	31502	32338	D	ACA1_210370	<31502..>32338	Acanthamoeba castellanii str. Neff	14915598
ACA1_210380	mRNA	ACA1_210380	NW_004457380.1	32728	34785	D	ACA1_210380	join(<32728..32796,32940..33044,33167..33241,33347..33409,33492..33513,33692..33791,33892..33952,34025..34096,34163..34255,34385..34434,34532..34601,34678..>34785)	Acanthamoeba castellanii str. Neff	14915599
ACA1_210390	mRNA	ACA1_210390	NW_004457380.1	35669	37754	D	ACA1_210390	join(<35669..35752,35902..36727,36850..36988,37081..37170,37276..37484,37633..>37754)	Acanthamoeba castellanii str. Neff	14915600
ACA1_210400	mRNA	ACA1_210400	NW_004457380.1	38691	40822	R	ACA1_210400	complement(join(<38691..38873,38977..39044,39144..39205,39301..39389,39472..39551,39662..39748,39834..39920,40010..40088,40185..40260,40351..40447,40801..>40822))	Acanthamoeba castellanii str. Neff	14915601
ACA1_210510	mRNA	ACA1_210510	NW_004457380.1	41676	42662	D	ACA1_210510	join(<41676..41782,41906..41972,42094..42178,42280..42356,42431..42521,42619..>42662)	Acanthamoeba castellanii str. Neff	14915602
ACA1_210520	mRNA	ACA1_210520	NW_004457380.1	43803	45858	D	ACA1_210520	join(<43803..43880,43998..44074,44215..44429,44513..44833,44900..45082,45169..45538,45585..>45858)	Acanthamoeba castellanii str. Neff	14915699
ACA1_210530	mRNA	ACA1_210530	NW_004457380.1	46528	50678	R	ACA1_210530	complement(join(<46528..46876,46973..47049,47156..47593,47633..47739,47844..48664,48757..48860,48959..49657,49754..50104,50227..50345,50424..50540,50609..>50678))	Acanthamoeba castellanii str. Neff	14915700
ACA1_210540	mRNA	ACA1_210540	NW_004457380.1	51026	55115	R	ACA1_210540	complement(join(<51026..51193,51271..51705,51784..51911,51999..52370,52435..52571,52661..52835,52940..53309,53357..53449,53540..53851,53937..54075,54174..54354,54420..54541,54625..>55115))	Acanthamoeba castellanii str. Neff	14915701
ACA1_210550	mRNA	ACA1_210550	NW_004457380.1	55880	56722	R	ACA1_210550	complement(join(<55880..55963,56026..56127,56227..56340,56405..56528,56607..>56722))	Acanthamoeba castellanii str. Neff	14915702
ACA1_210560	mRNA	ACA1_210560	NW_004457380.1	57481	61285	D	ACA1_210560	join(<57481..57487,57677..57856,57951..58280,59579..59986,60128..60355,60463..60629,60705..60783,60865..60961,61144..>61285)	Acanthamoeba castellanii str. Neff	14915703
ACA1_210670	mRNA	ACA1_210670	NW_004457380.1	62161	62935	R	ACA1_210670	complement(join(<62161..62201,62291..62369,62435..62506,62618..62729,62814..>62935))	Acanthamoeba castellanii str. Neff	14915704
ACA1_210680	mRNA	ACA1_210680	NW_004457380.1	63486	65685	D	ACA1_210680	join(<63486..63563,63694..63854,63948..64060,64154..64522,64610..64811,65088..65283,65590..>65685)	Acanthamoeba castellanii str. Neff	14915705
ACA1_210790	mRNA	ACA1_210790	NW_004457380.1	66087	67752	D	ACA1_210790	join(<66087..67052,67130..67216,67285..67368,67448..67535,67628..>67752)	Acanthamoeba castellanii str. Neff	14915706
ACA1_210800	mRNA	ACA1_210800	NW_004457380.1	67955	68443	D	ACA1_210800	join(<67955..68104,68175..68261,68333..>68443)	Acanthamoeba castellanii str. Neff	14915707
ACA1_210810	mRNA	ACA1_210810	NW_004457380.1	68977	70688	D	ACA1_210810	join(<68977..69030,69128..69268,69353..69541,69680..69940,70030..70113,70193..70302,70379..70433,70548..>70688)	Acanthamoeba castellanii str. Neff	14915708
ACA1_211130	mRNA	ACA1_211130	NW_004457380.1	73877	75155	D	ACA1_211130	join(<73877..74021,74092..74223,74366..74478,74583..74766,74853..74965,75048..>75155)	Acanthamoeba castellanii str. Neff	14915823
ACA1_211140	mRNA	ACA1_211140	NW_004457380.1	75253	77061	D	ACA1_211140	join(<75253..75565,75704..75843,75921..76013,76097..76579,76664..76814,76912..76944,77033..>77061)	Acanthamoeba castellanii str. Neff	14915824
ACA1_211150	mRNA	ACA1_211150	NW_004457380.1	77230	78746	D	ACA1_211150	join(<77230..77437,77564..77703,77800..77892,78001..78465,78529..78679,78739..>78746)	Acanthamoeba castellanii str. Neff	14915825
ACA1_211270	mRNA	ACA1_211270	NW_004457380.1	80046	81484	D	ACA1_211270	join(<80046..80116,80157..80323,80460..80559,80609..80774,80990..81091,81213..81296,81440..>81484)	Acanthamoeba castellanii str. Neff	14915827
ACA1_211380	mRNA	ACA1_211380	NW_004457380.1	83446	85336	D	ACA1_211380	join(<83446..83583,83711..83793,83845..83947,84014..84228,84354..84460,84689..85068,85163..>85336)	Acanthamoeba castellanii str. Neff	14915828
ACA1_211490	mRNA	ACA1_211490	NW_004457380.1	85600	86831	D	ACA1_211490	join(<85600..86028,86165..86371,86490..>86831)	Acanthamoeba castellanii str. Neff	14915829
ACA1_211500	mRNA	ACA1_211500	NW_004457380.1	87419	90143	D	ACA1_211500	join(<87419..87489,87533..87699,87832..87931,87977..88142,88207..88245,88340..88464,88555..88638,88723..88804,88906..88977,89037..89117,89226..89330,89419..89745,89808..89959,90038..>90143)	Acanthamoeba castellanii str. Neff	14915830
ACA1_211510	mRNA	ACA1_211510	NW_004457380.1	90678	91451	R	ACA1_211510	complement(join(<90678..90717,90832..>91451))	Acanthamoeba castellanii str. Neff	14915831
ACA1_211520	mRNA	ACA1_211520	NW_004457380.1	93173	98325	R	ACA1_211520	complement(join(<93173..93457,93545..93640,93719..93863,93916..94575,94670..95250,95270..95386,95402..95507,95555..96423,96505..97566,97578..97821,97911..98015,98119..98209,98283..>98325))	Acanthamoeba castellanii str. Neff	14915832
ACA1_211740	mRNA	ACA1_211740	NW_004457380.1	100232	100801	D	ACA1_211740	join(<100232..100451,100494..100724,100788..>100801)	Acanthamoeba castellanii str. Neff	14915957
ACA1_211750	mRNA	ACA1_211750	NW_004457380.1	101127	102714	R	ACA1_211750	complement(join(<101127..101378,101460..101726,101772..102115,102531..>102714))	Acanthamoeba castellanii str. Neff	14915958
ACA1_211760	mRNA	ACA1_211760	NW_004457380.1	104283	107029	R	ACA1_211760	complement(join(<104283..104406,104503..104659,104736..104832,104899..104980,105053..105415,105480..105577,105645..106817,106976..>107029))	Acanthamoeba castellanii str. Neff	14915959
ACA1_211770	mRNA	ACA1_211770	NW_004457380.1	107621	110187	R	ACA1_211770	complement(join(<107621..107674,107776..107840,107918..108063,108132..108186,108279..108418,108504..108567,108622..108690,108731..108823,108919..109117,109192..109513,109735..109786,109862..109918,109986..>110187))	Acanthamoeba castellanii str. Neff	14915960
ACA1_211790	mRNA	ACA1_211790	NW_004457380.1	112556	115289	D	ACA1_211790	join(<112556..112573,112609..112681,112713..113658,113862..114024,114134..114337,114460..114621,114718..114789,114854..114935,115030..>115289)	Acanthamoeba castellanii str. Neff	14915962
ACA1_211800	mRNA	ACA1_211800	NW_004457380.1	115318	115831	R	ACA1_211800	complement(join(<115318..115557,115706..>115831))	Acanthamoeba castellanii str. Neff	14915963
ACA1_211810	mRNA	ACA1_211810	NW_004457380.1	116515	116852	R	ACA1_211810	complement(join(<116515..116610,116643..>116852))	Acanthamoeba castellanii str. Neff	14915964
ACA1_211920	mRNA	ACA1_211920	NW_004457380.1	118134	118873	D	ACA1_211920	join(<118134..118309,118399..118525,118598..118707,118849..>118873)	Acanthamoeba castellanii str. Neff	14915965
ACA1_211930	mRNA	ACA1_211930	NW_004457380.1	119099	119825	R	ACA1_211930	complement(join(<119099..119383,119466..119659,119810..>119825))	Acanthamoeba castellanii str. Neff	14915966
ACA1_211940	mRNA	ACA1_211940	NW_004457380.1	120041	120511	R	ACA1_211940	complement(<120041..>120511)	Acanthamoeba castellanii str. Neff	14915967
ACA1_211950	mRNA	ACA1_211950	NW_004457380.1	120786	121382	R	ACA1_211950	complement(<120786..>121382)	Acanthamoeba castellanii str. Neff	14915968
ACA1_211960	mRNA	ACA1_211960	NW_004457380.1	122859	123223	R	ACA1_211960	complement(join(<122859..122901,122986..123031,123088..>123223))	Acanthamoeba castellanii str. Neff	14915969
ACA1_211970	mRNA	ACA1_211970	NW_004457380.1	123415	124010	D	ACA1_211970	join(<123415..123496,123557..123764,123833..>124010)	Acanthamoeba castellanii str. Neff	14915970
ACA1_212080	mRNA	ACA1_212080	NW_004457380.1	127551	128034	R	ACA1_212080	complement(join(<127551..127570,127587..>128034))	Acanthamoeba castellanii str. Neff	14915910
ACA1_212090	mRNA	ACA1_212090	NW_004457380.1	128710	129027	R	ACA1_212090	complement(<128710..>129027)	Acanthamoeba castellanii str. Neff	14915911
ACA1_212200	mRNA	ACA1_212200	NW_004457380.1	129342	129893	R	ACA1_212200	complement(<129342..>129893)	Acanthamoeba castellanii str. Neff	14915912
ACA1_212210	mRNA	ACA1_212210	NW_004457380.1	130666	137257	R	ACA1_212210	complement(join(<130666..130995,131118..131171,131273..131328,131495..131540,131721..131788,131890..131950,132042..132107,132188..132253,132415..132489,132643..132751,132891..133001,133096..133186,133329..133428,133506..133580,133682..133735,133811..133907,134010..134221,134347..134448,134594..134740,134841..135002,135153..135269,135379..135483,135569..135643,135766..136167,136312..136734,136800..136880,136952..>137257))	Acanthamoeba castellanii str. Neff	14915913
ACA1_212220	mRNA	ACA1_212220	NW_004457380.1	137393	137719	R	ACA1_212220	complement(join(<137393..137592,137647..>137719))	Acanthamoeba castellanii str. Neff	14915914
ACA1_212230	mRNA	ACA1_212230	NW_004457380.1	137827	138416	D	ACA1_212230	join(<137827..137928,138073..138309,138396..>138416)	Acanthamoeba castellanii str. Neff	14915915
ACA1_212240	mRNA	ACA1_212240	NW_004457380.1	138847	143311	D	ACA1_212240	join(<138847..139144,139258..139387,139410..139583,139677..139749,139957..140808,140883..141045,141571..141627,141834..141943,142034..142112,142197..142276,142344..142400,142477..142611,142700..142783,142884..143078,143186..>143311)	Acanthamoeba castellanii str. Neff	14915916
ACA1_212350	mRNA	ACA1_212350	NW_004457380.1	143433	146712	D	ACA1_212350	join(<143433..143470,143679..143766,144015..144236,144425..144642,144979..145122,145253..145410,145551..145680,145736..146297,146369..146605,146692..>146712)	Acanthamoeba castellanii str. Neff	14915917
ACA1_212360	mRNA	ACA1_212360	NW_004457380.1	147192	147432	D	ACA1_212360	<147192..>147432	Acanthamoeba castellanii str. Neff	14915918
ACA1_212470	mRNA	ACA1_212470	NW_004457380.1	147923	151061	R	ACA1_212470	complement(join(<147923..147941,148044..148119,148238..148373,148518..148813,148984..149098,149264..149369,149455..149568,149692..150081,150217..150274,150371..150489,150597..150696,150783..150834,150943..>151061))	Acanthamoeba castellanii str. Neff	14915919
ACA1_212580	mRNA	ACA1_212580	NW_004457380.1	151273	154208	D	ACA1_212580	join(<151273..151639,151779..151971,152090..152232,152461..153597,153679..153761,153835..153996,154107..>154208)	Acanthamoeba castellanii str. Neff	14915920
ACA1_212590	mRNA	ACA1_212590	NW_004457380.1	154629	155188	R	ACA1_212590	complement(join(<154629..154651,154791..154990,155076..>155188))	Acanthamoeba castellanii str. Neff	14915921
ACA1_212700	mRNA	ACA1_212700	NW_004457380.1	155365	155622	R	ACA1_212700	complement(<155365..>155622)	Acanthamoeba castellanii str. Neff	14915922
ACA1_212710	mRNA	ACA1_212710	NW_004457380.1	156093	157905	D	ACA1_212710	join(<156093..156357,156456..157381,157457..157788,157824..>157905)	Acanthamoeba castellanii str. Neff	14915923
ACA1_212820	mRNA	ACA1_212820	NW_004457380.1	158520	160575	R	ACA1_212820	complement(join(<158520..158616,158714..158781,158862..158958,159050..159114,159352..159492,159608..159896,159979..160153,160278..160473,160528..>160575))	Acanthamoeba castellanii str. Neff	14915924
ACA1_212830	mRNA	ACA1_212830	NW_004457380.1	160678	164593	R	ACA1_212830	complement(join(<160678..160984,161083..161143,161276..161372,161458..162473,162578..162735,162838..162893,162989..163067,163191..163309,163375..163456,163570..163640,163713..163907,163998..164090,164175..164254,164329..164350,164425..164469,164561..>164593))	Acanthamoeba castellanii str. Neff	14915846
ACA1_212840	mRNA	ACA1_212840	NW_004457380.1	164811	166043	D	ACA1_212840	<164811..>166043	Acanthamoeba castellanii str. Neff	14915847
ACA1_212860	mRNA	ACA1_212860	NW_004457380.1	170053	171199	D	ACA1_212860	join(<170053..170317,170425..170989,171163..>171199)	Acanthamoeba castellanii str. Neff	14915849
ACA1_212970	mRNA	ACA1_212970	NW_004457380.1	172116	172483	R	ACA1_212970	complement(join(<172116..172288,172387..>172483))	Acanthamoeba castellanii str. Neff	14915850
ACA1_213080	mRNA	ACA1_213080	NW_004457380.1	173144	174388	D	ACA1_213080	join(<173144..173186,173363..173868,174006..174097,174166..>174388)	Acanthamoeba castellanii str. Neff	14915851
ACA1_213090	mRNA	ACA1_213090	NW_004457380.1	175072	175354	D	ACA1_213090	<175072..>175354	Acanthamoeba castellanii str. Neff	14915852
ACA1_213200	mRNA	ACA1_213200	NW_004457380.1	175558	175716	D	ACA1_213200	<175558..>175716	Acanthamoeba castellanii str. Neff	14915853
ACA1_213210	mRNA	ACA1_213210	NW_004457380.1	176149	176720	R	ACA1_213210	complement(join(<176149..176447,176468..>176720))	Acanthamoeba castellanii str. Neff	14915854
ACA1_213320	mRNA	ACA1_213320	NW_004457380.1	176970	177824	D	ACA1_213320	join(<176970..177028,177128..177332,177477..177533,177693..>177824)	Acanthamoeba castellanii str. Neff	14915855
ACA1_213330	mRNA	ACA1_213330	NW_004457380.1	177968	179573	R	ACA1_213330	complement(join(<177968..178087,178181..178269,178340..178409,178510..178671,178773..178862,178900..178962,179067..179153,179265..179342,179451..>179573))	Acanthamoeba castellanii str. Neff	14915856
ACA1_213340	mRNA	ACA1_213340	NW_004457380.1	179787	180905	R	ACA1_213340	complement(join(<179787..179840,179961..180031,180185..180260,180385..180473,180587..180640,180706..180799,180888..>180905))	Acanthamoeba castellanii str. Neff	14915857
ACA1_213350	mRNA	ACA1_213350	NW_004457380.1	181188	183017	D	ACA1_213350	join(<181188..181472,181563..181869,182048..182110,182208..182350,182462..182845,182934..>183017)	Acanthamoeba castellanii str. Neff	14915858
ACA1_213460	mRNA	ACA1_213460	NW_004457380.1	183349	183540	D	ACA1_213460	<183349..>183540	Acanthamoeba castellanii str. Neff	14915859
ACA1_213570	mRNA	ACA1_213570	NW_004457380.1	184295	184609	D	ACA1_213570	<184295..>184609	Acanthamoeba castellanii str. Neff	14915860
ACA1_213790	mRNA	ACA1_213790	NW_004457380.1	190573	192814	D	ACA1_213790	join(<190573..190690,190826..190893,191168..191537,191743..191860,192002..192059,192359..>192814)	Acanthamoeba castellanii str. Neff	14915862
ACA1_214000	mRNA	ACA1_214000	NW_004457380.1	192902	194510	R	ACA1_214000	complement(join(<192902..193127,193243..193385,193548..193699,193778..194176,194316..194471,194483..>194510))	Acanthamoeba castellanii str. Neff	14915863
ACA1_214010	mRNA	ACA1_214010	NW_004457380.1	194645	197306	R	ACA1_214010	complement(join(<194645..194941,195105..195164,195268..195551,195634..195942,196081..196280,196396..196586,196828..196976,197039..>197306))	Acanthamoeba castellanii str. Neff	14915657
ACA1_214220	mRNA	ACA1_214220	NW_004457380.1	197865	199276	R	ACA1_214220	complement(join(<197865..198353,198472..198698,198889..199152,199234..>199276))	Acanthamoeba castellanii str. Neff	14915658
ACA1_214330	mRNA	ACA1_214330	NW_004457380.1	199477	203092	R	ACA1_214330	complement(join(<199477..199616,199693..199781,199887..200146,200240..200332,200415..200497,200650..201148,201297..201345,201471..201550,201674..201711,201816..201938,202050..202159,202189..202216,202382..202518,202621..202715,202913..>203092))	Acanthamoeba castellanii str. Neff	14915659
ACA1_214340	mRNA	ACA1_214340	NW_004457380.1	205680	206986	R	ACA1_214340	complement(join(<205680..205789,205870..205939,206064..206183,206388..206480,206762..>206986))	Acanthamoeba castellanii str. Neff	14915660
ACA1_214350	mRNA	ACA1_214350	NW_004457380.1	208153	210077	D	ACA1_214350	join(<208153..208284,208321..208522,208611..208753,208831..209027,209141..209340,209419..209748,209861..209884,209986..>210077)	Acanthamoeba castellanii str. Neff	14915661
ACA1_214460	mRNA	ACA1_214460	NW_004457380.1	210544	211361	R	ACA1_214460	complement(join(<210544..210697,210784..210902,211098..>211361))	Acanthamoeba castellanii str. Neff	14915662
ACA1_214570	mRNA	ACA1_214570	NW_004457380.1	213473	224973	D	ACA1_214570	join(<213473..213781,213874..213946,214029..214109,214221..214353,214462..214604,214667..214735,214833..215276,215372..215642,215758..216162,216273..216398,216472..216551,216636..216755,216863..216968,217079..217307,217397..217612,217703..217785,217855..217994,218097..218219,218306..218358,218447..218770,218884..219025,219123..219242,219354..219495,219572..219729,219815..219888,220006..220254,220356..220443,220523..220703,220796..220880,220976..221788,221892..222015,222129..222242,222320..222420,222517..222597,222722..223028,223106..223185,223848..223977,224051..224113,224214..224850,224910..>224973)	Acanthamoeba castellanii str. Neff	14915663
ACA1_214590	mRNA	ACA1_214590	NW_004457380.1	230592	231311	D	ACA1_214590	<230592..>231311	Acanthamoeba castellanii str. Neff	14915665
ACA1_214600	mRNA	ACA1_214600	NW_004457380.1	232054	232549	D	ACA1_214600	join(<232054..232148,232235..232379,232448..>232549)	Acanthamoeba castellanii str. Neff	14915666
ACA1_214610	mRNA	ACA1_214610	NW_004457380.1	232602	234616	R	ACA1_214610	complement(join(<232602..232726,232813..232915,232928..233000,233066..233198,233283..233447,233583..233754,233886..233992,234140..234252,234369..234403,234479..>234616))	Acanthamoeba castellanii str. Neff	14915667
ACA1_214620	mRNA	ACA1_214620	NW_004457380.1	234692	235130	R	ACA1_214620	complement(join(<234692..234913,234990..>235130))	Acanthamoeba castellanii str. Neff	14915668
ACA1_214630	mRNA	ACA1_214630	NW_004457380.1	235466	238780	R	ACA1_214630	complement(join(<235466..235692,235753..236598,236733..236945,237015..237290,237380..237451,237671..237784,237865..237951,238015..238113,238171..238569,238681..>238780))	Acanthamoeba castellanii str. Neff	14915669
ACA1_214640	mRNA	ACA1_214640	NW_004457380.1	239405	242801	R	ACA1_214640	complement(join(<239405..239835,239898..240289,240387..240813,240898..241099,241183..241656,241750..241968,242138..242525,242740..>242801))	Acanthamoeba castellanii str. Neff	14915670
ACA1_214850	mRNA	ACA1_214850	NW_004457380.1	245396	246911	D	ACA1_214850	join(<245396..245487,245561..245642,245742..245772,245865..245998,246063..>246911)	Acanthamoeba castellanii str. Neff	14915753
ACA1_214860	mRNA	ACA1_214860	NW_004457380.1	247577	248702	D	ACA1_214860	join(<247577..247597,247682..247770,247958..248066,248187..248270,248353..248383,248479..248525,248601..>248702)	Acanthamoeba castellanii str. Neff	14915754
ACA1_214870	mRNA	ACA1_214870	NW_004457380.1	248856	252466	D	ACA1_214870	join(<248856..249061,249155..249253,249264..249291,249373..249459,249576..249692,249794..249963,250078..250186,250252..250625,250702..250750,250840..250926,251007..251127,251209..251279,251355..251429,251532..251579,251677..251764,251860..251978,252077..252197,252339..>252466)	Acanthamoeba castellanii str. Neff	14915755
ACA1_214880	mRNA	ACA1_214880	NW_004457380.1	252806	261928	D	ACA1_214880	join(<252806..252986,253130..253542,253731..253921,254046..254248,254349..254684,254764..254999,255068..255127,255214..255499,255598..255747,255817..255888,255957..256439,256542..256812,256875..257255,257345..257470,257543..257631,257725..257838,257905..258010,258104..258211,258300..258636,258725..258807,258902..259041,259119..259244,259341..259393,259477..259568,259692..259975,260137..260449,260529..260866,260968..261379,261448..>261928)	Acanthamoeba castellanii str. Neff	14915756
ACA1_214890	mRNA	ACA1_214890	NW_004457380.1	262277	264287	D	ACA1_214890	join(<262277..262697,262783..262914,263045..263137,263321..263443,263584..263721,263813..263952,264030..>264287)	Acanthamoeba castellanii str. Neff	14915757
ACA1_214900	mRNA	ACA1_214900	NW_004457380.1	264388	265056	R	ACA1_214900	complement(join(<264388..264627,264736..>265056))	Acanthamoeba castellanii str. Neff	14915758
ACA1_214910	mRNA	ACA1_214910	NW_004457380.1	265259	265761	R	ACA1_214910	complement(join(<265259..265369,265434..265520,265609..>265761))	Acanthamoeba castellanii str. Neff	14915759
ACA1_214920	mRNA	ACA1_214920	NW_004457380.1	266370	266907	D	ACA1_214920	join(<266370..266435,266536..>266907)	Acanthamoeba castellanii str. Neff	14915760
ACA1_214930	mRNA	ACA1_214930	NW_004457380.1	267138	267916	D	ACA1_214930	join(<267138..267444,267493..267609,267768..>267916)	Acanthamoeba castellanii str. Neff	14915761
ACA1_214940	mRNA	ACA1_214940	NW_004457380.1	268035	270892	R	ACA1_214940	complement(join(<268035..268118,268221..268299,268386..268563,268671..268869,268989..269204,269296..269391,269507..269745,269844..269962,270065..270213,270354..270400,270529..270624,270730..>270892))	Acanthamoeba castellanii str. Neff	14915762
ACA1_214950	mRNA	ACA1_214950	NW_004457380.1	271033	271341	D	ACA1_214950	<271033..>271341	Acanthamoeba castellanii str. Neff	14915763
ACA1_214960	mRNA	ACA1_214960	NW_004457380.1	274939	275764	D	ACA1_214960	join(<274939..275393,275446..>275764)	Acanthamoeba castellanii str. Neff	14915764
ACA1_214970	mRNA	ACA1_214970	NW_004457380.1	275949	284010	R	ACA1_214970	complement(join(<275949..276641,276743..276869,276973..277038,277115..277237,277335..277790,277877..278270,278368..278449,278538..279403,279494..279676,279742..279926,279992..280071,280132..280287,280350..280717,280795..280883,280964..281082,281192..281534,281721..281782,281903..282150,282279..282390,282522..282850,282960..283058,283131..>284010))	Acanthamoeba castellanii str. Neff	14915765
ACA1_214980	mRNA	ACA1_214980	NW_004457380.1	284408	285691	D	ACA1_214980	join(<284408..284495,284567..284636,284822..284892,284989..285095,285210..285266,285345..285452,285548..>285691)	Acanthamoeba castellanii str. Neff	14915711
ACA1_214990	mRNA	ACA1_214990	NW_004457380.1	285878	288729	R	ACA1_214990	complement(join(<285878..285967,286042..286192,286210..286235,286319..286387,286464..286596,286812..287230,287341..287864,288000..>288729))	Acanthamoeba castellanii str. Neff	14915712
ACA1_215000	mRNA	ACA1_215000	NW_004457380.1	288965	291641	R	ACA1_215000	complement(join(<288965..289259,289337..289434,289499..290302,290445..290519,290616..>291641))	Acanthamoeba castellanii str. Neff	14915713
ACA1_215010	mRNA	ACA1_215010	NW_004457380.1	292551	294029	R	ACA1_215010	complement(join(<292551..292569,292745..292830,292974..293155,293228..293378,293462..293527,293615..293672,293743..293845,293969..>294029))	Acanthamoeba castellanii str. Neff	14915714
ACA1_215020	mRNA	ACA1_215020	NW_004457380.1	294823	296376	D	ACA1_215020	join(<294823..294897,295043..295211,295364..>296376)	Acanthamoeba castellanii str. Neff	14915715
ACA1_215030	mRNA	ACA1_215030	NW_004457380.1	296900	299042	R	ACA1_215030	complement(join(<296900..297226,297301..297418,297544..297634,297782..297884,298060..298143,298243..298394,298453..298667,298754..298829,299009..>299042))	Acanthamoeba castellanii str. Neff	14915716
ACA1_215050	mRNA	ACA1_215050	NW_004457380.1	302426	308043	R	ACA1_215050	complement(join(<302426..302514,302621..302676,302775..302892,302970..303182,303271..303385,303467..303538,303622..303704,303803..303937,304043..304244,304343..304414,304590..304669,304777..304831,304973..305099,305216..305298,305406..305587,305668..305746,305846..305894,305968..306049,306142..306260,306376..306452,306530..306620,306707..306823,306920..306954,307044..307135,307247..307316,307396..307470,307583..307663,307774..307848,307939..>308043))	Acanthamoeba castellanii str. Neff	14915718
ACA1_215070	mRNA	ACA1_215070	NW_004457380.1	310417	313637	R	ACA1_215070	complement(join(<310417..310495,310594..310670,310789..310919,311047..311170,311296..311478,311838..311987,312111..312456,312545..312628,312711..312792,312897..312960,313062..313500,313597..>313637))	Acanthamoeba castellanii str. Neff	14915720
ACA1_215080	mRNA	ACA1_215080	NW_004457380.1	313847	323078	R	ACA1_215080	complement(join(<313847..313988,314083..314153,314237..314466,314767..314850,314955..315800,316046..316206,316359..316390,316476..316544,316650..316783,316917..317397,317436..317639,317716..317846,317944..318100,318181..318283,318394..318518,318601..318741,318819..318869,318958..319066,319236..319366,319609..319687,319780..319864,319957..320126,320285..320414,320509..320556,320636..320800,320889..320993,321084..321208,321319..321377,321467..321522,321601..321659,321760..>323078))	Acanthamoeba castellanii str. Neff	14915721
ACA1_215290	mRNA	ACA1_215290	NW_004457380.1	323538	324709	D	ACA1_215290	join(<323538..323592,323668..323772,323888..323926,324131..324216,324650..>324709)	Acanthamoeba castellanii str. Neff	14915722
ACA1_215300	mRNA	ACA1_215300	NW_004457380.1	325117	330305	D	ACA1_215300	join(<325117..325122,325352..325435,325561..325629,325742..325915,326034..326131,326247..326302,326412..326482,326580..326728,326876..326987,327109..327173,327267..327342,327447..327526,327673..327778,327885..328052,328214..328360,328456..328536,328654..328728,328853..329159,329320..329761,329920..330049,330210..>330305)	Acanthamoeba castellanii str. Neff	14915768
ACA1_215310	mRNA	ACA1_215310	NW_004457380.1	330427	332368	D	ACA1_215310	join(<330427..330586,330705..330804,330913..331188,331356..331582,331702..332290,332359..>332368)	Acanthamoeba castellanii str. Neff	14915769
ACA1_215420	mRNA	ACA1_215420	NW_004457380.1	332670	333038	R	ACA1_215420	complement(<332670..>333038)	Acanthamoeba castellanii str. Neff	14915770
ACA1_215430	mRNA	ACA1_215430	NW_004457380.1	333785	334521	R	ACA1_215430	complement(join(<333785..333859,334049..334169,334281..334329,334404..>334521))	Acanthamoeba castellanii str. Neff	14915771
ACA1_215440	mRNA	ACA1_215440	NW_004457380.1	334731	336586	R	ACA1_215440	complement(join(<334731..335281,335369..335602,335726..335861,335969..336130,336191..336438,336547..>336586))	Acanthamoeba castellanii str. Neff	14915772
ACA1_215450	mRNA	ACA1_215450	NW_004457380.1	336769	337650	R	ACA1_215450	complement(join(<336769..337080,337174..>337650))	Acanthamoeba castellanii str. Neff	14915773
ACA1_215460	mRNA	ACA1_215460	NW_004457380.1	338151	339002	R	ACA1_215460	complement(join(<338151..338326,338404..338619,338679..338733,338934..>339002))	Acanthamoeba castellanii str. Neff	14915774
ACA1_215470	mRNA	ACA1_215470	NW_004457380.1	339237	341234	D	ACA1_215470	join(<339237..339430,339532..339675,339749..339949,340115..340250,340370..340431,340551..340637,340764..340841,340927..341057,341143..>341234)	Acanthamoeba castellanii str. Neff	14915775
ACA1_215480	mRNA	ACA1_215480	NW_004457380.1	341542	343465	D	ACA1_215480	join(<341542..341548,341602..341733,341831..341912,342001..342076,342199..342339,342437..342722,342743..342813,342912..343037,343136..343287,343375..>343465)	Acanthamoeba castellanii str. Neff	14915776
ACA1_215490	mRNA	ACA1_215490	NW_004457380.1	343661	345354	R	ACA1_215490	complement(join(<343661..343773,344192..344316,344475..344623,344717..344788,344884..344950,345011..>345354))	Acanthamoeba castellanii str. Neff	14915777
ACA1_215600	mRNA	ACA1_215600	NW_004457380.1	345522	348325	R	ACA1_215600	complement(join(<345522..345624,345695..345915,346039..346182,346236..346329,346456..346941,347015..347256,347382..347754,347864..348006,348146..>348325))	Acanthamoeba castellanii str. Neff	14915778
ACA1_215610	mRNA	ACA1_215610	NW_004457380.1	348555	349383	R	ACA1_215610	complement(join(<348555..348800,348899..348994,349114..>349383))	Acanthamoeba castellanii str. Neff	14915779
ACA1_215620	mRNA	ACA1_215620	NW_004457380.1	349845	350993	R	ACA1_215620	complement(join(<349845..350110,350224..350379,350488..350577,350682..350726,350930..>350993))	Acanthamoeba castellanii str. Neff	14915780
ACA1_215630	mRNA	ACA1_215630	NW_004457380.1	351357	352595	R	ACA1_215630	complement(join(<351357..351366,351597..351698,351821..351945,352076..352148,352270..352383,352453..>352595))	Acanthamoeba castellanii str. Neff	14915781
ACA1_215640	mRNA	ACA1_215640	NW_004457380.1	352818	362307	D	ACA1_215640	join(<352818..352906,353096..353205,353341..353420,353502..353720,353873..353947,354058..354171,354263..354337,354446..354520,354675..354743,354881..354954,355019..355061,355225..355255,355328..355408,355502..355611,355697..355782,355888..356025,356140..356266,356358..356511,356625..356761,356895..357014,357127..357190,357285..357423,357560..357733,357844..357946,358025..358096,358204..358302,358455..358547,358631..358798,358924..358998,359106..359210,359387..359481,359616..359754,359845..360034,360134..360213,360289..360360,360473..360569,360717..360847,361064..361114,361211..361407,361571..361665,361769..361869,361974..362072,362194..>362307)	Acanthamoeba castellanii str. Neff	14915686
ACA1_215650	mRNA	ACA1_215650	NW_004457380.1	362851	363799	D	ACA1_215650	join(<362851..363387,363513..363737,363761..>363799)	Acanthamoeba castellanii str. Neff	14915687
ACA1_215660	mRNA	ACA1_215660	NW_004457380.1	364123	372064	R	ACA1_215660	complement(join(<364123..364278,364370..364456,364603..364663,364795..364911,365367..365883,365904..366519,366598..366684,366838..366932,367000..367093,367203..367262,367453..367557,367653..367733,367861..368619,368727..368865,369006..369103,369224..369312,369473..369554,369682..369758,369868..369987,370075..370169,370267..370364,370659..370744,370854..370939,371062..371125,371192..371258,371391..371479,371587..371650,371734..371803,371877..371962,372044..>372064))	Acanthamoeba castellanii str. Neff	14915688
ACA1_215680	mRNA	ACA1_215680	NW_004457380.1	375244	375639	R	ACA1_215680	complement(<375244..>375639)	Acanthamoeba castellanii str. Neff	14915690
ACA1_215690	mRNA	ACA1_215690	NW_004457380.1	375738	379185	R	ACA1_215690	complement(join(<375738..376013,376108..376233,376445..376557,376663..376783,376879..377259,377337..377830,377942..378212,378388..378525,378630..378683,378838..>379185))	Acanthamoeba castellanii str. Neff	14915691
ACA1_215700	mRNA	ACA1_215700	NW_004457380.1	379692	380728	R	ACA1_215700	complement(join(<379692..379865,379938..380332,380452..>380728))	Acanthamoeba castellanii str. Neff	14915692
ACA1_215710	mRNA	ACA1_215710	NW_004457380.1	381527	381886	D	ACA1_215710	join(<381527..381686,381750..>381886)	Acanthamoeba castellanii str. Neff	14915693
ACA1_215720	mRNA	ACA1_215720	NW_004457380.1	382176	382926	D	ACA1_215720	join(<382176..382448,382513..>382926)	Acanthamoeba castellanii str. Neff	14915694
ACA1_215730	mRNA	ACA1_215730	NW_004457380.1	384361	385333	D	ACA1_215730	join(<384361..384498,384584..384652,384701..>385333)	Acanthamoeba castellanii str. Neff	14915695
ACA1_215740	mRNA	ACA1_215740	NW_004457380.1	385424	385985	R	ACA1_215740	complement(join(<385424..385678,385707..>385985))	Acanthamoeba castellanii str. Neff	14915696
ACA1_215750	mRNA	ACA1_215750	NW_004457380.1	386621	388006	D	ACA1_215750	join(<386621..386768,386856..387027,387129..387421,387520..387576,387696..387805,387884..>388006)	Acanthamoeba castellanii str. Neff	14915697
ACA1_215760	mRNA	ACA1_215760	NW_004457380.1	388176	390684	D	ACA1_215760	join(<388176..388208,388299..388359,388496..388721,388854..389046,389156..389240,389381..389614,389692..389836,389986..390091,390168..390272,390412..>390684)	Acanthamoeba castellanii str. Neff	14915698
ACA1_215770	mRNA	ACA1_215770	NW_004457380.1	391264	391943	R	ACA1_215770	complement(join(<391264..391372,391443..391537,391627..391724,391787..>391943))	Acanthamoeba castellanii str. Neff	14915633
ACA1_215780	mRNA	ACA1_215780	NW_004457380.1	392620	395371	D	ACA1_215780	join(<392620..392729,392839..392906,392994..393144,393278..393488,393609..393777,393853..393928,394025..394188,394298..394692,395067..395130,395238..>395371)	Acanthamoeba castellanii str. Neff	14915634
ACA1_215790	mRNA	ACA1_215790	NW_004457380.1	395624	399414	D	ACA1_215790	join(<395624..395699,395790..395881,395960..396025,396142..396255,396339..396412,396495..396625,396751..396851,396985..397053,397165..397368,397464..397518,397639..397706,397933..398078,398193..398229,398651..398854,398946..399000,399233..>399414)	Acanthamoeba castellanii str. Neff	14915635
ACA1_215900	mRNA	ACA1_215900	NW_004457380.1	400362	401454	D	ACA1_215900	join(<400362..400405,400525..400593,400861..401108,401222..>401454)	Acanthamoeba castellanii str. Neff	14915636
ACA1_215910	mRNA	ACA1_215910	NW_004457380.1	401770	404536	D	ACA1_215910	join(<401770..401846,401907..402112,402213..402319,402417..402617,402646..402718,402833..402952,403073..403230,403345..403450,403558..403693,403802..403867,403950..404033,404126..404205,404310..>404536)	Acanthamoeba castellanii str. Neff	14915637
ACA1_215920	mRNA	ACA1_215920	NW_004457380.1	405465	408841	D	ACA1_215920	join(<405465..405488,405565..405644,405759..405830,405953..406016,406193..406273,406399..406539,406707..406835,406980..407099,407242..407302,407372..407455,407552..407611,407752..407819,407965..408081,408160..408234,408328..408444,408534..408625,408769..>408841)	Acanthamoeba castellanii str. Neff	14915638
ACA1_215930	mRNA	ACA1_215930	NW_004457380.1	409021	411322	R	ACA1_215930	complement(join(<409021..409388,409487..409601,409711..409779,409902..410082,410157..410245,410417..410511,410600..410759,410919..411085,411202..>411322))	Acanthamoeba castellanii str. Neff	14915639
ACA1_215940	mRNA	ACA1_215940	NW_004457380.1	411433	413829	D	ACA1_215940	join(<411433..411622,411782..411865,412031..412134,412279..412499,412664..412724,412820..413015,413141..413243,413501..413595,413681..>413829)	Acanthamoeba castellanii str. Neff	14915640
ACA1_215950	mRNA	ACA1_215950	NW_004457380.1	414037	414686	D	ACA1_215950	join(<414037..414126,414217..414440,414566..>414686)	Acanthamoeba castellanii str. Neff	14915641
ACA1_215960	mRNA	ACA1_215960	NW_004457380.1	414911	417220	D	ACA1_215960	join(<414911..415865,415943..415994,416038..416183,416322..416948,417024..>417220)	Acanthamoeba castellanii str. Neff	14915642
ACA1_215970	mRNA	ACA1_215970	NW_004457380.1	417308	422009	R	ACA1_215970	complement(join(<417308..417444,417529..417654,417801..418028,418158..418277,418363..418506,418599..418669,418751..418943,418984..419093,419168..419297,419372..419515,419567..419689,419789..419899,419985..420110,420212..420315,420379..420598,420691..420799,420925..420997,421119..421221,421293..421425,421590..421765,421889..>422009))	Acanthamoeba castellanii str. Neff	14915643
ACA1_215980	mRNA	ACA1_215980	NW_004457380.1	422291	423938	R	ACA1_215980	complement(join(<422291..423045,423141..423333,423435..423640,423896..>423938))	Acanthamoeba castellanii str. Neff	14915644
ACA1_215990	mRNA	ACA1_215990	NW_004457380.1	424041	427792	D	ACA1_215990	join(<424041..424144,424227..424440,424553..424621,424706..424786,424860..424925,425041..425578,425692..425792,425870..426307,426389..426498,426636..426738,426775..426822,426935..427226,427294..427349,427445..427555,427661..>427792)	Acanthamoeba castellanii str. Neff	14915620
ACA1_216000	mRNA	ACA1_216000	NW_004457380.1	428552	431339	D	ACA1_216000	join(<428552..428683,428763..428947,429036..429088,429179..429339,429450..429524,429673..429809,429929..430090,430229..430353,430673..430822,431152..>431339)	Acanthamoeba castellanii str. Neff	14915621
ACA1_216010	mRNA	ACA1_216010	NW_004457380.1	431456	432261	R	ACA1_216010	complement(join(<431456..431764,431851..>432261))	Acanthamoeba castellanii str. Neff	14915622
ACA1_216020	mRNA	ACA1_216020	NW_004457380.1	432543	434922	R	ACA1_216020	complement(join(<432543..432652,432757..432830,432983..433339,433461..433490,433597..433682,433844..433936,434051..434268,434372..434481,434586..434653,434791..>434922))	Acanthamoeba castellanii str. Neff	14915623
ACA1_216030	mRNA	ACA1_216030	NW_004457380.1	437004	439886	D	ACA1_216030	<437004..>439886	Acanthamoeba castellanii str. Neff	14915624
ACA1_216040	mRNA	ACA1_216040	NW_004457380.1	440284	444620	R	ACA1_216040	complement(join(<440284..440359,440467..440525,440648..440784,440911..440982,441184..441277,441368..441468,441585..441658,441796..441875,441967..442024,442113..442260,442464..442518,442725..442804,442904..442944,443037..443783,444050..444281,444399..444450,444549..>444620))	Acanthamoeba castellanii str. Neff	14915625
ACA1_216050	mRNA	ACA1_216050	NW_004457380.1	444991	449498	D	ACA1_216050	join(<444991..445147,445220..445334,445433..445661,445743..445836,445957..446125,446235..446480,446594..446859,447151..447299,447412..447540,447635..447995,448145..448224,448410..448646,448745..448901,449016..449275,449361..>449498)	Acanthamoeba castellanii str. Neff	14915626
ACA1_216060	mRNA	ACA1_216060	NW_004457380.1	449727	450533	D	ACA1_216060	join(<449727..450140,450225..>450533)	Acanthamoeba castellanii str. Neff	14915627
ACA1_216070	mRNA	ACA1_216070	NW_004457380.1	450672	453600	R	ACA1_216070	complement(join(<450672..450786,450914..450990,451110..451189,451358..451427,451558..451616,451691..451853,452063..452378,452516..452613,452732..452827,452992..453288,453316..453395,453498..>453600))	Acanthamoeba castellanii str. Neff	14915628
ACA1_216080	mRNA	ACA1_216080	NW_004457380.1	453711	456331	R	ACA1_216080	complement(join(<453711..453781,453944..454001,454118..454191,454394..454526,454695..455002,455177..455291,455426..455507,455628..455710,455831..455911,456012..456066,456159..>456331))	Acanthamoeba castellanii str. Neff	14915629
ACA1_216190	mRNA	ACA1_216190	NW_004457380.1	458099	460674	R	ACA1_216190	complement(join(<458099..458211,458311..458412,458489..458613,458769..458905,459136..459317,459442..459665,459843..459973,460086..460510,460566..>460674))	Acanthamoeba castellanii str. Neff	14915630
ACA1_216300	mRNA	ACA1_216300	NW_004457380.1	461233	465361	D	ACA1_216300	join(<461233..461309,461451..461568,461773..461860,462046..462143,462217..462311,462349..462514,462644..462686,462828..463300,463434..463495,463633..463728,463952..464725,464884..464953,465110..>465361)	Acanthamoeba castellanii str. Neff	14915631
ACA1_216310	mRNA	ACA1_216310	NW_004457380.1	465821	465994	R	ACA1_216310	complement(<465821..>465994)	Acanthamoeba castellanii str. Neff	14915632
ACA1_216320	mRNA	ACA1_216320	NW_004457380.1	466509	469061	D	ACA1_216320	join(<466509..466607,466720..466814,466956..467095,467235..467384,467534..467616,467726..467825,467909..468030,468137..468241,468354..468514,468623..468730,468893..>469061)	Acanthamoeba castellanii str. Neff	14915645
ACA1_216330	mRNA	ACA1_216330	NW_004457380.1	469556	471705	D	ACA1_216330	join(<469556..470543,470702..470796,470910..470978,471098..471264,471338..471364,471447..>471705)	Acanthamoeba castellanii str. Neff	14915646
ACA1_216340	mRNA	ACA1_216340	NW_004457380.1	471837	474411	D	ACA1_216340	join(<471837..471855,471922..472103,472262..472378,472539..472566,472627..472787,472913..473008,473241..473280,473460..473642,473791..473876,474223..474325,474365..>474411)	Acanthamoeba castellanii str. Neff	14915647
ACA1_216350	mRNA	ACA1_216350	NW_004457380.1	474689	478156	D	ACA1_216350	join(<474689..474752,474834..474910,474987..475061,475188..475326,475403..475487,475907..475979,476123..476575,476673..476722,476904..477093,477259..477336,477457..477616,477686..477836,478135..>478156)	Acanthamoeba castellanii str. Neff	14915648
ACA1_216360	mRNA	ACA1_216360	NW_004457380.1	478353	479817	D	ACA1_216360	join(<478353..478469,478629..478716,478935..478998,479097..479184,479278..479349,479474..479539,479698..>479817)	Acanthamoeba castellanii str. Neff	14915649
ACA1_216370	mRNA	ACA1_216370	NW_004457380.1	480013	482802	D	ACA1_216370	join(<480013..480135,480302..480389,480537..480600,480699..480801,480941..481151,481266..481321,481478..481582,481706..481799,481994..482404,482552..>482802)	Acanthamoeba castellanii str. Neff	14915650
ACA1_216380	mRNA	ACA1_216380	NW_004457380.1	483002	485231	D	ACA1_216380	join(<483002..483140,483254..483453,483623..483816,484226..484457,484585..484653,484720..484815,484870..485025,485106..>485231)	Acanthamoeba castellanii str. Neff	14915651
ACA1_216390	mRNA	ACA1_216390	NW_004457380.1	487449	491373	R	ACA1_216390	complement(join(<487449..487487,487549..487659,487779..487983,488077..488189,488321..488523,488603..488681,488817..488966,489159..489397,489515..489629,489799..489868,490050..490171,490290..490553,490628..490786,490880..490988,491115..491184,491304..>491373))	Acanthamoeba castellanii str. Neff	14915652
ACA1_216400	mRNA	ACA1_216400	NW_004457380.1	491541	492389	R	ACA1_216400	complement(join(<491541..491578,491604..491697,491871..492136,492167..>492389))	Acanthamoeba castellanii str. Neff	14915653
ACA1_216410	mRNA	ACA1_216410	NW_004457380.1	492799	493346	D	ACA1_216410	join(<492799..492835,493144..493296,493333..>493346)	Acanthamoeba castellanii str. Neff	14915654
ACA1_216420	mRNA	ACA1_216420	NW_004457380.1	493805	497927	R	ACA1_216420	complement(join(<493805..493876,493997..494164,494179..494364,494483..494622,494749..494791,495072..495142,495293..495835,495924..496035,496140..496252,496458..496677,496740..496886,497135..497263,497388..497448,497573..497675,497909..>497927))	Acanthamoeba castellanii str. Neff	14915655
ACA1_216430	mRNA	ACA1_216430	NW_004457380.1	498404	503550	D	ACA1_216430	join(<498404..498508,498519..498593,498645..498699,498838..498932,499121..499186,499279..499418,499510..499644,499673..499702,499756..499856,499999..500157,500256..500612,500760..500841,501027..501076,501196..501314,501492..501595,501739..501855,501975..502104,502190..502348,502422..502571,502673..502799,502912..503284,503436..>503550)	Acanthamoeba castellanii str. Neff	14915656
ACA1_216440	mRNA	ACA1_216440	NW_004457380.1	503742	508654	D	ACA1_216440	join(<503742..503906,503980..504079,504159..504220,504340..504549,504679..504737,504868..504933,505077..505206,505331..505392,505520..505610,505745..505822,506236..506314,506438..506645,506828..506924,507039..507095,507330..507425,507553..507618,507871..507929,508050..508173,508303..508428,508508..>508654)	Acanthamoeba castellanii str. Neff	14915810
ACA1_216450	mRNA	ACA1_216450	NW_004457380.1	508822	510543	R	ACA1_216450	complement(join(<508822..508884,508959..509038,509202..509280,509394..509507,509635..509856,509968..510086,510266..510384,510482..>510543))	Acanthamoeba castellanii str. Neff	14915811
ACA1_216460	mRNA	ACA1_216460	NW_004457380.1	510716	511732	R	ACA1_216460	complement(join(<510716..510822,510983..511278,511447..511541,511724..>511732))	Acanthamoeba castellanii str. Neff	14915812
ACA1_216570	mRNA	ACA1_216570	NW_004457380.1	512212	512729	D	ACA1_216570	join(<512212..512365,512506..>512729)	Acanthamoeba castellanii str. Neff	14915813
ACA1_216680	mRNA	ACA1_216680	NW_004457380.1	513102	513769	D	ACA1_216680	join(<513102..513108,513223..513323,513429..513527,513656..>513769)	Acanthamoeba castellanii str. Neff	14915814
ACA1_216690	mRNA	ACA1_216690	NW_004457380.1	514610	514950	D	ACA1_216690	<514610..>514950	Acanthamoeba castellanii str. Neff	14915815
ACA1_216800	mRNA	ACA1_216800	NW_004457380.1	515102	516195	R	ACA1_216800	complement(join(<515102..515379,515498..515608,515751..>516195))	Acanthamoeba castellanii str. Neff	14915816
ACA1_216810	mRNA	ACA1_216810	NW_004457380.1	516379	518440	D	ACA1_216810	join(<516379..516413,516600..517446,517531..518265,518417..>518440)	Acanthamoeba castellanii str. Neff	14915817
ACA1_216820	mRNA	ACA1_216820	NW_004457380.1	518529	522539	D	ACA1_216820	join(<518529..518589,518660..518693,518789..518879,519034..519081,519201..519286,519426..519475,519553..519644,519802..519985,520139..520228,520395..520501,520577..520628,520876..520996,521142..521205,521238..521288,521380..521473,521647..521751,521888..521963,522061..522180,522275..522385,522476..>522539)	Acanthamoeba castellanii str. Neff	14915818
ACA1_216930	mRNA	ACA1_216930	NW_004457380.1	522656	525241	R	ACA1_216930	complement(join(<522656..522711,522815..522864,523002..523049,523214..523268,523421..523466,523897..523948,524081..524135,524344..524397,524858..524926,525041..525067,525193..>525241))	Acanthamoeba castellanii str. Neff	14915819
ACA1_217140	mRNA	ACA1_217140	NW_004457380.1	525437	526509	D	ACA1_217140	join(<525437..525585,525698..525830,525931..526026,526154..526271,526403..>526509)	Acanthamoeba castellanii str. Neff	14915820
ACA1_217150	mRNA	ACA1_217150	NW_004457380.1	527456	530955	R	ACA1_217150	complement(join(<527456..527597,527702..527957,528045..528171,528252..528500,528667..528849,528953..529090,529210..529287,529365..529493,529573..529714,529813..529872,529992..530154,530481..>530955))	Acanthamoeba castellanii str. Neff	14915821
ACA1_217160	mRNA	ACA1_217160	NW_004457380.1	531262	532417	D	ACA1_217160	join(<531262..531331,531393..531480,531611..531717,531871..531917,532076..532181,532299..>532417)	Acanthamoeba castellanii str. Neff	14915822
ACA1_217170	mRNA	ACA1_217170	NW_004457380.1	532660	535162	R	ACA1_217170	complement(join(<532660..532859,532939..533073,533173..533309,533382..533485,533607..533762,533923..534108,534154..534373,534517..534596,534679..535017,535124..>535162))	Acanthamoeba castellanii str. Neff	14915738
ACA1_217180	mRNA	ACA1_217180	NW_004457380.1	535606	538524	D	ACA1_217180	join(<535606..536230,536386..536572,536690..536780,536824..536946,537090..537243,537342..537412,537526..537652,537772..537863,537959..538180,538279..>538524)	Acanthamoeba castellanii str. Neff	14915739
ACA1_217190	mRNA	ACA1_217190	NW_004457380.1	538740	539655	R	ACA1_217190	complement(join(<538740..538924,539006..539105,539244..539339,539413..539477,539538..>539655))	Acanthamoeba castellanii str. Neff	14915740
ACA1_217200	mRNA	ACA1_217200	NW_004457380.1	539996	540679	D	ACA1_217200	<539996..>540679	Acanthamoeba castellanii str. Neff	14915741
ACA1_217210	mRNA	ACA1_217210	NW_004457380.1	540870	542256	R	ACA1_217210	complement(join(<540870..541415,541522..541683,541785..541939,542034..>542256))	Acanthamoeba castellanii str. Neff	14915742
ACA1_217220	mRNA	ACA1_217220	NW_004457380.1	542457	544642	R	ACA1_217220	complement(join(<542457..542636,542679..542853,542955..543092,543234..543351,543447..543524,543652..543791,543902..544087,544216..544492,544558..>544642))	Acanthamoeba castellanii str. Neff	14915743
ACA1_217230	mRNA	ACA1_217230	NW_004457380.1	545497	548311	D	ACA1_217230	join(<545497..545769,545853..546069,546107..546265,546374..546452,546552..546960,547103..547213,547351..547506,547617..547875,548000..548118,548219..>548311)	Acanthamoeba castellanii str. Neff	14915744
ACA1_217240	mRNA	ACA1_217240	NW_004457380.1	548549	549678	D	ACA1_217240	join(<548549..548611,548715..548870,549005..549152,549201..549387,549486..>549678)	Acanthamoeba castellanii str. Neff	14915745
ACA1_217260	mRNA	ACA1_217260	NW_004457380.1	550970	554151	R	ACA1_217260	complement(join(<550970..551076,551174..551629,551728..551930,552050..552169,552242..552326,552421..552614,552715..552793,552921..553071,553216..553403,553546..553645,553791..554058,554075..>554151))	Acanthamoeba castellanii str. Neff	14915747
ACA1_217270	mRNA	ACA1_217270	NW_004457380.1	554771	555301	R	ACA1_217270	complement(join(<554771..554829,554953..>555301))	Acanthamoeba castellanii str. Neff	14915748
ACA1_217280	mRNA	ACA1_217280	NW_004457380.1	556134	559568	D	ACA1_217280	join(<556134..556192,556296..556649,556750..556787,556897..556973,557127..557246,557374..557517,557616..557714,557828..558298,558380..558582,558653..558803,559230..>559568)	Acanthamoeba castellanii str. Neff	14915749
ACA1_217290	mRNA	ACA1_217290	NW_004457380.1	560501	561793	R	ACA1_217290	complement(join(<560501..560763,560824..560982,561064..561226,561297..561418,561500..561599,561668..>561793))	Acanthamoeba castellanii str. Neff	14915750
ACA1_217300	mRNA	ACA1_217300	NW_004457380.1	562178	564605	R	ACA1_217300	complement(join(<562178..562309,562468..562537,562611..562780,562938..563004,563113..563168,563235..563265,563493..563893,563988..564116,564207..564259,564341..>564605))	Acanthamoeba castellanii str. Neff	14915751
ACA1_217310	mRNA	ACA1_217310	NW_004457380.1	564824	565225	R	ACA1_217310	complement(join(<564824..564966,565051..>565225))	Acanthamoeba castellanii str. Neff	14915752
ACA1_217320	mRNA	ACA1_217320	NW_004457380.1	565332	566222	R	ACA1_217320	complement(<565332..>566222)	Acanthamoeba castellanii str. Neff	14915671
ACA1_217330	mRNA	ACA1_217330	NW_004457380.1	566242	572545	R	ACA1_217330	complement(join(<566242..566669,566752..567168,567272..567452,567481..567565,567667..567703,567952..568132,568288..568406,568493..568588,568669..568770,568856..568951,569017..569078,569170..569414,569580..569598,569696..569811,569896..570033,570124..570214,570290..570391,570557..570693,570767..570818,570890..571010,571117..571225,571332..571409,571508..571706,571799..571904,571984..572129,572208..572334,572455..>572545))	Acanthamoeba castellanii str. Neff	14915672
ACA1_217340	mRNA	ACA1_217340	NW_004457380.1	572882	574265	D	ACA1_217340	join(<572882..573018,573108..573190,573279..573374,573390..573480,573600..573724,573819..573902,573972..574028,574129..>574265)	Acanthamoeba castellanii str. Neff	14915673
ACA1_217350	mRNA	ACA1_217350	NW_004457380.1	574417	575933	D	ACA1_217350	join(<574417..575298,575443..575755,575842..>575933)	Acanthamoeba castellanii str. Neff	14915674
ACA1_217360	mRNA	ACA1_217360	NW_004457380.1	576138	576917	R	ACA1_217360	complement(join(<576138..576296,576458..576528,576622..576690,576779..>576917))	Acanthamoeba castellanii str. Neff	14915675
ACA1_217370	mRNA	ACA1_217370	NW_004457380.1	577091	581310	D	ACA1_217370	join(<577091..577198,577270..577440,577574..577687,577878..578009,578041..578219,578321..578456,578558..578636,578734..578834,578978..579380,579444..579586,579695..579796,579920..580075,580174..580243,580349..580464,580533..580696,580782..581174,581304..>581310)	Acanthamoeba castellanii str. Neff	14915676
ACA1_217480	mRNA	ACA1_217480	NW_004457380.1	581800	582121	R	ACA1_217480	complement(join(<581800..581876,581973..582059,582104..>582121))	Acanthamoeba castellanii str. Neff	14915677
ACA1_217590	mRNA	ACA1_217590	NW_004457380.1	587747	588460	D	ACA1_217590	join(<587747..587781,587886..588255,588368..>588460)	Acanthamoeba castellanii str. Neff	14915678
ACA1_217700	mRNA	ACA1_217700	NW_004457380.1	589099	592534	D	ACA1_217700	join(<589099..589254,589276..589431,589584..590170,590243..590387,590517..590714,590889..590967,591072..591209,591310..591471,591545..591738,591809..592070,592167..592237,592337..>592534)	Acanthamoeba castellanii str. Neff	14915679
ACA1_217710	mRNA	ACA1_217710	NW_004457380.1	592625	594072	R	ACA1_217710	complement(join(<592625..592750,592824..592975,593088..593306,593378..593465,593490..593590,593718..>594072))	Acanthamoeba castellanii str. Neff	14915680
ACA1_217720	mRNA	ACA1_217720	NW_004457380.1	594188	595361	R	ACA1_217720	complement(join(<594188..594480,594559..594735,594823..594907,594986..595117,595257..>595361))	Acanthamoeba castellanii str. Neff	14915681
ACA1_217730	mRNA	ACA1_217730	NW_004457380.1	595577	595828	D	ACA1_217730	<595577..>595828	Acanthamoeba castellanii str. Neff	14915682
ACA1_217740	mRNA	ACA1_217740	NW_004457380.1	596177	599799	D	ACA1_217740	join(<596177..596408,596505..596572,596690..596799,596934..597032,597137..597218,597288..597371,597526..597612,597773..597931,598063..598186,598296..598411,598497..598571,598687..598782,598869..598931,599041..599110,599213..599328,599413..599562,599689..>599799)	Acanthamoeba castellanii str. Neff	14915683
ACA1_217750	mRNA	ACA1_217750	NW_004457380.1	600185	604571	D	ACA1_217750	join(<600185..600284,600365..600573,600671..600860,600951..601322,601402..601756,601837..602708,602778..603080,603159..603644,603719..604046,604130..>604571)	Acanthamoeba castellanii str. Neff	14915684
ACA1_217760	mRNA	ACA1_217760	NW_004457380.1	604912	608184	D	ACA1_217760	join(<604912..605382,605586..605754,605878..606159,606266..606367,606499..606592,606709..606844,606978..607073,607176..607303,607410..607733,607827..>608184)	Acanthamoeba castellanii str. Neff	14915782
ACA1_217770	mRNA	ACA1_217770	NW_004457380.1	608294	612815	R	ACA1_217770	complement(join(<608294..608397,608497..608603,608700..608842,608972..609075,609190..609312,609364..609503,609638..609716,609874..610078,610184..610320,610465..610633,610710..610806,611042..611157,611237..611953,612074..612199,612256..612316,612394..612492,612625..>612815))	Acanthamoeba castellanii str. Neff	14915783
ACA1_217780	mRNA	ACA1_217780	NW_004457380.1	613994	622151	D	ACA1_217780	join(<613994..614086,614216..614833,615106..617697,617791..618106,618230..619068,619990..621400,621658..>622151)	Acanthamoeba castellanii str. Neff	14915784
ACA1_218090	mRNA	ACA1_218090	NW_004457380.1	622584	625094	R	ACA1_218090	complement(join(<622584..622886,622991..623271,623399..623504,623627..623723,623864..624096,624185..624286,624433..624619,624832..>625094))	Acanthamoeba castellanii str. Neff	14915785
ACA1_218100	mRNA	ACA1_218100	NW_004457380.1	625686	627452	R	ACA1_218100	complement(join(<625686..625861,625962..626087,626249..626303,626418..626558,626640..626822,626932..626993,627061..627120,627236..>627452))	Acanthamoeba castellanii str. Neff	14915786
ACA1_218110	mRNA	ACA1_218110	NW_004457380.1	628038	628883	D	ACA1_218110	<628038..>628883	Acanthamoeba castellanii str. Neff	14915787
ACA1_218120	mRNA	ACA1_218120	NW_004457380.1	629062	630457	D	ACA1_218120	join(<629062..629267,629382..629731,629806..629947,630069..630201,630344..>630457)	Acanthamoeba castellanii str. Neff	14915788
ACA1_218130	mRNA	ACA1_218130	NW_004457380.1	630533	632088	R	ACA1_218130	complement(join(<630533..630718,630797..630910,631022..631121,631227..631331,631484..631540,631620..631769,631892..>632088))	Acanthamoeba castellanii str. Neff	14915789
ACA1_218140	mRNA	ACA1_218140	NW_004457380.1	632462	634922	R	ACA1_218140	complement(join(<632462..633249,633344..>634922))	Acanthamoeba castellanii str. Neff	14915790
ACA1_218260	mRNA	ACA1_218260	NW_004457380.1	642540	642776	D	ACA1_218260	<642540..>642776	Acanthamoeba castellanii str. Neff	14915792
ACA1_218370	mRNA	ACA1_218370	NW_004457380.1	643155	648744	D	ACA1_218370	join(<643155..643340,643463..643522,643682..643856,643998..644158,644267..644375,644495..644538,644687..644771,644905..645067,645151..645263,645390..645608,645730..645843,645955..646053,646160..646318,646465..646548,646646..646866,646958..647233,647346..647443,647551..647714,647798..648116,648222..648497,648612..>648744)	Acanthamoeba castellanii str. Neff	14915793
ACA1_218380	mRNA	ACA1_218380	NW_004457380.1	649052	649282	R	ACA1_218380	complement(<649052..>649282)	Acanthamoeba castellanii str. Neff	14915794
ACA1_218390	mRNA	ACA1_218390	NW_004457380.1	649396	652656	R	ACA1_218390	complement(join(<649396..649638,649733..649877,649961..650115,650293..650544,650622..650712,650827..650915,651004..651074,651216..651369,651509..651633,651714..651851,651987..652366,652547..>652656))	Acanthamoeba castellanii str. Neff	14915795
ACA1_218400	mRNA	ACA1_218400	NW_004457380.1	653116	653779	D	ACA1_218400	join(<653116..653141,653180..653260,653329..653395,653476..653585,653704..>653779)	Acanthamoeba castellanii str. Neff	14915796
ACA1_218410	mRNA	ACA1_218410	NW_004457380.1	654540	654894	R	ACA1_218410	complement(join(<654540..654646,654753..>654894))	Acanthamoeba castellanii str. Neff	14915797
ACA1_218420	mRNA	ACA1_218420	NW_004457380.1	657557	657793	D	ACA1_218420	<657557..>657793	Acanthamoeba castellanii str. Neff	14915798
ACA1_218430	mRNA	ACA1_218430	NW_004457380.1	658207	659068	R	ACA1_218430	complement(join(<658207..658383,658462..658668,658736..658828,658925..>659068))	Acanthamoeba castellanii str. Neff	14915799
ACA1_218440	mRNA	ACA1_218440	NW_004457380.1	659206	659884	D	ACA1_218440	join(<659206..659258,659351..659440,659537..659643,659766..>659884)	Acanthamoeba castellanii str. Neff	14915800
ACA1_218450	mRNA	ACA1_218450	NW_004457380.1	660023	662071	R	ACA1_218450	complement(join(<660023..660249,660374..660536,660614..660719,660823..660920,661015..661131,661276..661341,661470..661531,661654..661746,661913..661962,662034..>662071))	Acanthamoeba castellanii str. Neff	14915801
ACA1_218460	mRNA	ACA1_218460	NW_004457380.1	662350	662613	D	ACA1_218460	<662350..>662613	Acanthamoeba castellanii str. Neff	14915802
ACA1_218470	mRNA	ACA1_218470	NW_004457380.1	663040	664383	R	ACA1_218470	complement(join(<663040..663155,663260..663338,664090..664226,664344..>664383))	Acanthamoeba castellanii str. Neff	14915803
ACA1_218580	mRNA	ACA1_218580	NW_004457380.1	664657	669663	R	ACA1_218580	complement(join(<664657..664907,664987..665139,665287..665356,665445..665588,665708..666618,666741..666836,666918..667097,667257..667432,667550..667680,667815..667917,668031..668210,668338..668461,668537..669204,669386..>669663))	Acanthamoeba castellanii str. Neff	14915804
ACA1_218590	mRNA	ACA1_218590	NW_004457380.1	669885	672239	R	ACA1_218590	complement(join(<669885..669902,670025..670248,670428..670521,670630..670779,670936..671046,671199..671291,671456..671518,671609..671694,671804..671914,672002..>672239))	Acanthamoeba castellanii str. Neff	14915805
ACA1_218600	mRNA	ACA1_218600	NW_004457380.1	672454	676116	R	ACA1_218600	complement(join(<672454..673131,673143..674703,674822..675246,675352..675636,675704..675790,675859..675968,676074..>676116))	Acanthamoeba castellanii str. Neff	14915806
ACA1_218610	mRNA	ACA1_218610	NW_004457380.1	676351	677944	R	ACA1_218610	complement(join(<676351..676473,676595..676900,677021..677128,677237..677381,677475..677670,677752..>677944))	Acanthamoeba castellanii str. Neff	14915807
ACA1_218620	mRNA	ACA1_218620	NW_004457380.1	678478	681199	R	ACA1_218620	complement(join(<678478..678676,678778..678862,678960..679040,679132..679392,679455..679559,679591..679705,679787..679849,679933..680067,680156..680272,680386..680472,680585..680745,680884..680977,681053..>681199))	Acanthamoeba castellanii str. Neff	14915808
ACA1_218630	mRNA	ACA1_218630	NW_004457380.1	682166	682654	D	ACA1_218630	join(<682166..682276,682338..682398,682469..682505,682585..>682654)	Acanthamoeba castellanii str. Neff	14915809
ACA1_218640	mRNA	ACA1_218640	NW_004457380.1	682869	684116	R	ACA1_218640	complement(join(<682869..682935,683010..683290,683376..683542,683625..683664,683733..683800,683960..684025,684095..>684116))	Acanthamoeba castellanii str. Neff	14915723
ACA1_218650	mRNA	ACA1_218650	NW_004457380.1	684385	685422	R	ACA1_218650	complement(join(<684385..684567,684690..684803,684882..685137,685418..>685422))	Acanthamoeba castellanii str. Neff	14915724
ACA1_218670	mRNA	ACA1_218670	NW_004457380.1	686349	687908	R	ACA1_218670	complement(join(<686349..686519,686620..686736,686822..686893,686976..687635,687846..>687908))	Acanthamoeba castellanii str. Neff	14915726
ACA1_218680	mRNA	ACA1_218680	NW_004457380.1	688516	690476	R	ACA1_218680	complement(join(<688516..688940,689017..689286,689503..689758,689890..689970,690072..690152,690251..690307,690417..>690476))	Acanthamoeba castellanii str. Neff	14915727
ACA1_218690	mRNA	ACA1_218690	NW_004457380.1	690672	691480	D	ACA1_218690	join(<690672..690824,690943..691064,691177..691297,691373..>691480)	Acanthamoeba castellanii str. Neff	14915728
ACA1_218700	mRNA	ACA1_218700	NW_004457380.1	692450	696385	D	ACA1_218700	join(<692450..693223,693552..694073,694121..694201,694324..694827,694929..695191,695268..695667,696263..>696385)	Acanthamoeba castellanii str. Neff	14915729
ACA1_218910	mRNA	ACA1_218910	NW_004457380.1	696521	698188	D	ACA1_218910	join(<696521..696558,696666..696949,697083..697200,697342..697466,697480..697873,698002..>698188)	Acanthamoeba castellanii str. Neff	14915730
ACA1_219020	mRNA	ACA1_219020	NW_004457380.1	698547	699831	D	ACA1_219020	join(<698547..698704,698792..698988,699080..>699831)	Acanthamoeba castellanii str. Neff	14915731
ACA1_219030	mRNA	ACA1_219030	NW_004457380.1	699981	701098	D	ACA1_219030	join(<699981..700103,700226..700343,700411..700486,700622..700707,700825..701009,701057..>701098)	Acanthamoeba castellanii str. Neff	14915732
ACA1_219040	mRNA	ACA1_219040	NW_004457380.1	701829	704911	D	ACA1_219040	join(<701829..701986,702133..702250,702350..702477,702612..702724,702796..702860,702955..703140,703298..703603,703689..703750,703764..703927,704014..704415,704495..704712,704813..>704911)	Acanthamoeba castellanii str. Neff	14915733
ACA1_219050	mRNA	ACA1_219050	NW_004457380.1	705288	706028	R	ACA1_219050	complement(join(<705288..705438,705532..705668,705738..>706028))	Acanthamoeba castellanii str. Neff	14915734
ACA1_219060	mRNA	ACA1_219060	NW_004457380.1	706355	709799	R	ACA1_219060	complement(join(<706355..707992,708071..708330,708475..708565,708578..708699,708866..709206,709228..709549,709622..>709799))	Acanthamoeba castellanii str. Neff	14915735
ACA1_219070	mRNA	ACA1_219070	NW_004457380.1	710158	712700	D	ACA1_219070	join(<710158..710222,710302..710416,710517..710751,710832..711031,711110..711201,711312..711442,711525..711640,711725..711793,711903..712040,712120..712231,712303..712512,712594..>712700)	Acanthamoeba castellanii str. Neff	14915736
ACA1_219080	mRNA	ACA1_219080	NW_004457380.1	712798	717099	D	ACA1_219080	join(<712798..712891,713002..713123,713208..713282,713440..713532,713617..713705,713818..713973,714096..714186,714274..714368,714532..714678,714787..714886,715051..715129,715264..715412,715514..715633,715734..715868,715954..716076,716159..716242,716362..>717099)	Acanthamoeba castellanii str. Neff	14915737
ACA1_219090	mRNA	ACA1_219090	NW_004457380.1	717181	717527	D	ACA1_219090	join(<717181..717222,717273..>717527)	Acanthamoeba castellanii str. Neff	14915834
ACA1_219100	mRNA	ACA1_219100	NW_004457380.1	717677	728796	R	ACA1_219100	complement(join(<717677..717839,717935..718085,718162..718450,718571..718810,718918..719014,719146..719335,719466..719659,719757..719953,720059..720260,720359..720513,720693..720801,720905..721294,721372..721550,721654..721728,721818..722003,722116..722438,722535..722724,722814..722941,723060..723281,723380..723519,723630..723757,723904..724115,724260..724374,724464..724649,724860..725182,725266..725455,725543..725670,725788..725815,726599..726810,726896..727175,727294..727451,727570..727760,727849..728038,728135..728254,728322..728454,728584..728629,728693..>728796))	Acanthamoeba castellanii str. Neff	14915835
ACA1_219410	mRNA	ACA1_219410	NW_004457380.1	729021	730199	R	ACA1_219410	complement(join(<729021..729356,729484..729612,729734..729822,729917..729984,730099..>730199))	Acanthamoeba castellanii str. Neff	14915836
ACA1_219420	mRNA	ACA1_219420	NW_004457380.1	731197	732643	D	ACA1_219420	join(<731197..731419,731498..731582,731665..731725,731873..731953,732168..732284,732385..732441,732533..>732643)	Acanthamoeba castellanii str. Neff	14915837
ACA1_219430	mRNA	ACA1_219430	NW_004457380.1	732845	733359	D	ACA1_219430	join(<732845..733000,733059..733153,733236..>733359)	Acanthamoeba castellanii str. Neff	14915838
ACA1_219440	mRNA	ACA1_219440	NW_004457380.1	733461	738235	R	ACA1_219440	complement(join(<733461..733934,734033..734913,735018..735124,735239..735804,735905..735995,736078..737108,737191..737284,737409..>738235))	Acanthamoeba castellanii str. Neff	14915839
ACA1_219450	mRNA	ACA1_219450	NW_004457380.1	739085	739774	R	ACA1_219450	complement(join(<739085..739108,739217..739309,739416..739723,739762..>739774))	Acanthamoeba castellanii str. Neff	14915840
ACA1_219460	mRNA	ACA1_219460	NW_004457380.1	741287	743574	D	ACA1_219460	join(<741287..741358,741451..741621,741742..741899,741993..742060,742155..742287,742395..742533,742622..742699,742808..742966,743025..743063,743172..743257,743514..>743574)	Acanthamoeba castellanii str. Neff	14915841
ACA1_219470	mRNA	ACA1_219470	NW_004457380.1	743934	744721	D	ACA1_219470	join(<743934..744662,744683..>744721)	Acanthamoeba castellanii str. Neff	14915842
ACA1_219480	mRNA	ACA1_219480	NW_004457380.1	745077	749905	D	ACA1_219480	join(<745077..745535,745617..745644,745809..745926,746023..746092,746199..746361,746493..746646,746740..746913,747009..747123,747224..747448,747559..747663,747774..747920,748023..748163,748249..748332,748411..748587,748701..748784,748897..749128,749245..749376,749459..749586,749678..>749905)	Acanthamoeba castellanii str. Neff	14915843
ACA1_219490	mRNA	ACA1_219490	NW_004457380.1	750104	751358	D	ACA1_219490	join(<750104..750615,750733..750845,750940..751078,751268..>751358)	Acanthamoeba castellanii str. Neff	14915844
ACA1_219500	mRNA	ACA1_219500	NW_004457380.1	751879	753595	R	ACA1_219500	complement(join(<751879..752007,752102..752243,752353..752492,752587..752767,752938..753075,753213..>753595))	Acanthamoeba castellanii str. Neff	14915845
ACA1_219510	mRNA	ACA1_219510	NW_004457380.1	753904	755602	R	ACA1_219510	complement(join(<753904..753951,754020..754108,754192..754267,754326..754477,754561..754642,754710..754829,755591..>755602))	Acanthamoeba castellanii str. Neff	14915584
ACA1_219630	mRNA	ACA1_219630	NW_004457380.1	761734	762090	R	ACA1_219630	complement(<761734..>762090)	Acanthamoeba castellanii str. Neff	14915586
ACA1_219640	mRNA	ACA1_219640	NW_004457380.1	762353	763660	R	ACA1_219640	complement(join(<762353..763229,763377..>763660))	Acanthamoeba castellanii str. Neff	14915587
ACA1_219650	mRNA	ACA1_219650	NW_004457380.1	763996	764679	D	ACA1_219650	join(<763996..764122,764223..764287,764390..764531,764645..>764679)	Acanthamoeba castellanii str. Neff	14915588
ACA1_219660	mRNA	ACA1_219660	NW_004457380.1	765338	765796	R	ACA1_219660	complement(join(<765338..765354,765466..>765796))	Acanthamoeba castellanii str. Neff	14915589
ACA1_219670	mRNA	ACA1_219670	NW_004457380.1	766904	769626	R	ACA1_219670	complement(join(<766904..767043,767159..767246,767383..767429,767535..768145,768256..768539,768690..769121,769212..769259,769381..>769626))	Acanthamoeba castellanii str. Neff	14915590
ACA1_219680	mRNA	ACA1_219680	NW_004457380.1	769982	774763	R	ACA1_219680	complement(join(<769982..770631,770754..770922,771017..771121,771210..771277,771387..771518,771685..771733,771828..772067,772214..772346,772436..772592,772715..773060,773207..773296,773457..773567,773664..773734,773824..773904,773992..>774763))	Acanthamoeba castellanii str. Neff	14915591
ACA1_219690	mRNA	ACA1_219690	NW_004457380.1	775554	776959	D	ACA1_219690	join(<775554..775678,775852..776303,776411..776469,776556..776690,776801..>776959)	Acanthamoeba castellanii str. Neff	14915592
ACA1_219700	mRNA	ACA1_219700	NW_004457380.1	777173	783317	R	ACA1_219700	complement(join(<777173..777639,777721..777840,777965..778156,778258..778626,778722..778809,778823..778842,778987..779073,779336..779474,779597..779740,779870..779923,780089..780277,780549..780669,780822..780930,781071..781232,781348..781488,781606..781686,781779..781946,782118..782201,782296..782447,782503..782648,782812..782945,783164..>783317))	Acanthamoeba castellanii str. Neff	14915593
ACA1_219710	mRNA	ACA1_219710	NW_004457380.1	783656	784249	R	ACA1_219710	complement(<783656..>784249)	Acanthamoeba castellanii str. Neff	14915594
ACA1_219720	mRNA	ACA1_219720	NW_004457380.1	784734	788923	D	ACA1_219720	join(<784734..784818,784931..785062,785525..785645,785750..785858,785950..786122,786226..786282,786445..786508,786711..786804,786898..787162,787297..787470,787553..787679,787821..787931,788039..788182,788286..788592,788688..>788923)	Acanthamoeba castellanii str. Neff	14915595
ACA1_219730	mRNA	ACA1_219730	NW_004457380.1	789179	796848	R	ACA1_219730	complement(join(<789179..789249,789389..789527,789634..789720,789852..789938,790063..790125,790142..790167,790342..790352,790432..790456,790576..790728,790824..790896,791033..791188,791300..791392,791513..791569,791666..791736,791818..791883,791975..792155,792237..792341,792439..793505,793651..793850,793970..794094,794208..794504,794525..794620,794819..794888,794991..795065,795140..795251,795355..795556,795656..795775,795969..796056,796139..>796848))	Acanthamoeba castellanii str. Neff	14915596
ACA1_219740	mRNA	ACA1_219740	NW_004457380.1	797437	798305	D	ACA1_219740	join(<797437..797512,797596..797789,797877..797938,798021..798131,798257..>798305)	Acanthamoeba castellanii str. Neff	14915597
ACA1_219750	mRNA	ACA1_219750	NW_004457380.1	798550	801417	D	ACA1_219750	join(<798550..798972,799053..799141,799266..799398,799520..799681,799777..799849,799937..800004,800156..800410,800538..800634,800782..800923,801043..801148,801358..>801417)	Acanthamoeba castellanii str. Neff	14915896
ACA1_219760	mRNA	ACA1_219760	NW_004457380.1	802047	807563	D	ACA1_219760	join(<802047..802448,802529..802756,802788..802897,802994..803171,803298..803370,803487..803635,803745..803886,803954..804103,804187..804365,804480..804661,804760..804913,805032..805422,805518..805716,805828..806023,806113..806337,806477..806568,806731..806824,806915..807041,807129..807294,807416..>807563)	Acanthamoeba castellanii str. Neff	14915897
ACA1_219770	mRNA	ACA1_219770	NW_004457380.1	807811	810131	D	ACA1_219770	join(<807811..808177,808285..808485,808577..808906,809008..809072,809105..809416,809519..809658,809758..809856,809960..>810131)	Acanthamoeba castellanii str. Neff	14915898
ACA1_219780	mRNA	ACA1_219780	NW_004457380.1	810588	810932	D	ACA1_219780	<810588..>810932	Acanthamoeba castellanii str. Neff	14915899
ACA1_219790	mRNA	ACA1_219790	NW_004457380.1	811144	815197	R	ACA1_219790	complement(join(<811144..811194,811293..811451,811535..811675,811775..811883,811991..812157,812233..812455,812561..812712,812799..812924,813009..813709,813778..813938,814065..814609,814736..>815197))	Acanthamoeba castellanii str. Neff	14915900
ACA1_219800	mRNA	ACA1_219800	NW_004457380.1	815984	817451	D	ACA1_219800	join(<815984..816302,816396..816630,816732..816871,816935..817172,817238..>817451)	Acanthamoeba castellanii str. Neff	14915901
ACA1_219810	mRNA	ACA1_219810	NW_004457380.1	817967	818842	R	ACA1_219810	complement(join(<817967..818603,818688..>818842))	Acanthamoeba castellanii str. Neff	14915902
ACA1_219820	mRNA	ACA1_219820	NW_004457380.1	819109	820323	R	ACA1_219820	complement(join(<819109..819868,819956..>820323))	Acanthamoeba castellanii str. Neff	14915903
ACA1_219830	mRNA	ACA1_219830	NW_004457380.1	820821	822658	R	ACA1_219830	complement(join(<820821..820978,821097..821186,821322..821459,821639..821792,821874..821948,822043..822151,822270..822385,822500..>822658))	Acanthamoeba castellanii str. Neff	14915904
ACA1_219840	mRNA	ACA1_219840	NW_004457380.1	822778	823049	D	ACA1_219840	join(<822778..822787,822844..>823049)	Acanthamoeba castellanii str. Neff	14915905
ACA1_219850	mRNA	ACA1_219850	NW_004457380.1	823141	826178	R	ACA1_219850	complement(join(<823141..823300,823407..823570,823674..824055,824168..824220,824362..824456,824553..824635,824744..824887,824999..825217,825330..825469,825553..825997,826081..>826178))	Acanthamoeba castellanii str. Neff	14915906
ACA1_219860	mRNA	ACA1_219860	NW_004457380.1	826255	828285	D	ACA1_219860	join(<826255..826395,826540..827125,827210..827268,827361..827574,827648..>828285)	Acanthamoeba castellanii str. Neff	14915907
ACA1_219870	mRNA	ACA1_219870	NW_004457380.1	828443	830643	R	ACA1_219870	complement(join(<828443..828738,828825..828960,829076..829143,829276..829434,829517..829762,829898..830046,830155..830276,830410..>830643))	Acanthamoeba castellanii str. Neff	14915908
ACA1_219880	mRNA	ACA1_219880	NW_004457380.1	830797	833687	R	ACA1_219880	complement(join(<830797..830963,831134..831153,831185..831249,831341..831448,831555..831703,831823..831868,831964..832038,832117..832217,832358..832480,832565..832645,832746..832848,832931..833002,833097..833192,833296..833399,833434..833504,833566..>833687))	Acanthamoeba castellanii str. Neff	14915909
ACA1_219890	mRNA	ACA1_219890	NW_004457380.1	833965	834557	D	ACA1_219890	join(<833965..834159,834186..>834557)	Acanthamoeba castellanii str. Neff	14915864
ACA1_219900	mRNA	ACA1_219900	NW_004457380.1	834906	837722	R	ACA1_219900	complement(join(<834906..835080,835182..835355,835472..835708,835806..835976,836083..836857,836958..837099,837218..837428,837562..>837722))	Acanthamoeba castellanii str. Neff	14915865
ACA1_219920	mRNA	ACA1_219920	NW_004457380.1	843680	844795	D	ACA1_219920	join(<843680..844108,844276..844710,844760..>844795)	Acanthamoeba castellanii str. Neff	14915867
ACA1_220030	mRNA	ACA1_220030	NW_004457380.1	846162	846886	R	ACA1_220030	complement(join(<846162..846210,846371..846498,846596..>846886))	Acanthamoeba castellanii str. Neff	14915868
ACA1_220040	mRNA	ACA1_220040	NW_004457380.1	847077	848154	R	ACA1_220040	complement(join(<847077..847290,847359..847758,847828..847931,848009..848059,848144..>848154))	Acanthamoeba castellanii str. Neff	14915869
ACA1_220050	mRNA	ACA1_220050	NW_004457380.1	849344	851199	D	ACA1_220050	join(<849344..849404,849543..849740,849890..850063,850260..850791,850887..>851199)	Acanthamoeba castellanii str. Neff	14915870
ACA1_220060	mRNA	ACA1_220060	NW_004457380.1	851953	853760	D	ACA1_220060	join(<851953..852190,852334..852998,853073..853226,853327..>853760)	Acanthamoeba castellanii str. Neff	14915871
ACA1_220070	mRNA	ACA1_220070	NW_004457380.1	854187	855777	D	ACA1_220070	join(<854187..854201,854369..854485,854543..854651,854739..855121,855223..>855777)	Acanthamoeba castellanii str. Neff	14915872
ACA1_220090	mRNA	ACA1_220090	NW_004457380.1	860475	862914	R	ACA1_220090	complement(join(<860475..860631,860770..860897,860985..861088,861227..861367,861454..861639,861773..861892,862002..862087,862197..862285,862359..862600,862803..>862914))	Acanthamoeba castellanii str. Neff	14915874
ACA1_220100	mRNA	ACA1_220100	NW_004457380.1	863167	863608	R	ACA1_220100	complement(join(<863167..863447,863593..>863608))	Acanthamoeba castellanii str. Neff	14915875
ACA1_220110	mRNA	ACA1_220110	NW_004457380.1	864703	866252	R	ACA1_220110	complement(join(<864703..864747,864825..864908,865008..865091,865176..865334,865506..865580,865740..865857,865954..866048,866160..>866252))	Acanthamoeba castellanii str. Neff	14915876
ACA1_220120	mRNA	ACA1_220120	NW_004457380.1	866958	867963	D	ACA1_220120	join(<866958..867294,867416..>867963)	Acanthamoeba castellanii str. Neff	14915877
ACA1_220130	mRNA	ACA1_220130	NW_004457380.1	868142	869049	D	ACA1_220130	join(<868142..868202,868293..868393,868611..868782,868898..>869049)	Acanthamoeba castellanii str. Neff	14915878
ACA1_220140	mRNA	ACA1_220140	NW_004457380.1	869465	871984	D	ACA1_220140	<869465..>871984	Acanthamoeba castellanii str. Neff	14915879
ACA1_220160	mRNA	ACA1_220160	NW_004457380.1	875832	880460	R	ACA1_220160	complement(join(<875832..876002,876065..876187,876298..876384,876498..876584,876658..876748,876918..877034,877156..877240,877395..877482,877564..877657,877839..877922,878027..878165,878345..878402,878508..878665,878772..878892,878992..879159,879239..879297,879411..879527,879625..879685,879807..879904,880031..>880460))	Acanthamoeba castellanii str. Neff	14915925
ACA1_220170	mRNA	ACA1_220170	NW_004457380.1	881026	884007	D	ACA1_220170	join(<881026..881240,881452..881563,881648..881796,881905..881997,882105..882147,882166..>884007)	Acanthamoeba castellanii str. Neff	14915926
ACA1_220180	mRNA	ACA1_220180	NW_004457380.1	884128	890428	R	ACA1_220180	complement(join(<884128..885036,885146..885213,885306..885457,885582..885700,885771..885969,886112..886696,886807..886913,887088..887151,887241..887431,887536..887651,887794..887917,888042..888119,888133..888194,888317..888460,888583..888747,888971..889129,889213..889323,889414..889556,890034..>890428))	Acanthamoeba castellanii str. Neff	14915927
ACA1_220190	mRNA	ACA1_220190	NW_004457380.1	891323	894252	R	ACA1_220190	complement(join(<891323..891501,891593..891794,891892..891963,892055..892152,892221..892312,892400..892567,892669..892740,892824..893229,893313..893396,893495..893602,893670..893773,893856..894013,894136..>894252))	Acanthamoeba castellanii str. Neff	14915928
ACA1_220200	mRNA	ACA1_220200	NW_004457380.1	894468	898279	D	ACA1_220200	join(<894468..894571,894674..894913,894985..895165,895235..895454,895525..895601,895676..895813,895884..895970,896048..896119,896190..896363,896430..896501,896586..896955,897014..897183,897249..897342,897417..897500,897619..897695,897833..898188,898264..>898279)	Acanthamoeba castellanii str. Neff	14915929
ACA1_220210	mRNA	ACA1_220210	NW_004457380.1	898242	899474	R	ACA1_220210	complement(join(<898242..898275,898768..898946,899049..>899474))	Acanthamoeba castellanii str. Neff	14915930
ACA1_220320	mRNA	ACA1_220320	NW_004457380.1	899909	900557	D	ACA1_220320	join(<899909..900004,900148..900403,900544..>900557)	Acanthamoeba castellanii str. Neff	14915931
ACA1_220430	mRNA	ACA1_220430	NW_004457380.1	901135	901394	R	ACA1_220430	complement(join(<901135..901175,901193..>901394))	Acanthamoeba castellanii str. Neff	14915932
ACA1_220440	mRNA	ACA1_220440	NW_004457380.1	901943	902158	R	ACA1_220440	complement(<901943..>902158)	Acanthamoeba castellanii str. Neff	14915933
ACA1_220450	mRNA	ACA1_220450	NW_004457380.1	902378	902699	R	ACA1_220450	complement(join(<902378..902617,902694..>902699))	Acanthamoeba castellanii str. Neff	14915934
ACA1_220460	mRNA	ACA1_220460	NW_004457380.1	902803	903872	R	ACA1_220460	complement(join(<902803..902922,902989..903492,903548..903744,903803..>903872))	Acanthamoeba castellanii str. Neff	14915935
ACA1_220470	mRNA	ACA1_220470	NW_004457380.1	905876	906301	D	ACA1_220470	join(<905876..905893,906005..>906301)	Acanthamoeba castellanii str. Neff	14915936
ACA1_220480	mRNA	ACA1_220480	NW_004457380.1	906735	907008	R	ACA1_220480	complement(join(<906735..906781,906849..>907008))	Acanthamoeba castellanii str. Neff	14915937
ACA1_220490	mRNA	ACA1_220490	NW_004457380.1	907436	908438	D	ACA1_220490	join(<907436..907726,907792..907923,907983..>908438)	Acanthamoeba castellanii str. Neff	14915938
ACA1_220500	mRNA	ACA1_220500	NW_004457380.1	908561	909306	D	ACA1_220500	join(<908561..908830,908872..>909306)	Acanthamoeba castellanii str. Neff	14915939
ACA1_220510	mRNA	ACA1_220510	NW_004457380.1	910130	912619	D	ACA1_220510	join(<910130..910225,910344..910621,910739..910862,910974..911154,911219..911319,911470..911592,911673..911831,911927..912028,912155..912332,912438..>912619)	Acanthamoeba castellanii str. Neff	14915941
ACA1_220530	mRNA	ACA1_220530	NW_004457380.1	917190	917613	D	ACA1_220530	join(<917190..917409,917486..>917613)	Acanthamoeba castellanii str. Neff	14915943
ACA1_220540	mRNA	ACA1_220540	NW_004457380.1	918468	920483	D	ACA1_220540	join(<918468..918845,918964..919439,919514..919575,919770..919840,919921..919986,920059..920145,920253..>920483)	Acanthamoeba castellanii str. Neff	14915944
ACA1_220550	mRNA	ACA1_220550	NW_004457380.1	920565	921560	D	ACA1_220550	join(<920565..921223,921294..921398,921488..>921560)	Acanthamoeba castellanii str. Neff	14915945
ACA1_220570	mRNA	ACA1_220570	NW_004457380.1	923389	924959	D	ACA1_220570	join(<923389..923401,923526..923653,923785..923935,923952..923995,924038..924151,924224..924312,924450..924513,924608..924705,924797..>924959)	Acanthamoeba castellanii str. Neff	14915947
ACA1_220580	mRNA	ACA1_220580	NW_004457380.1	925278	926006	D	ACA1_220580	<925278..>926006	Acanthamoeba castellanii str. Neff	14915948
ACA1_220590	mRNA	ACA1_220590	NW_004457380.1	926233	927090	D	ACA1_220590	join(<926233..926356,926427..926543,926618..926736,926812..926893,926972..>927090)	Acanthamoeba castellanii str. Neff	14915949
ACA1_220600	mRNA	ACA1_220600	NW_004457380.1	927357	928194	D	ACA1_220600	join(<927357..927587,927691..927873,928006..>928194)	Acanthamoeba castellanii str. Neff	14915950
ACA1_220610	mRNA	ACA1_220610	NW_004457380.1	928297	931940	R	ACA1_220610	complement(join(<928297..928434,928533..928656,928740..928954,929017..929146,929245..929294,929412..929576,929665..929820,929939..930023,930170..930251,930401..930550,930629..930796,930905..931057,931145..931212,931308..931396,931665..>931940))	Acanthamoeba castellanii str. Neff	14915951
ACA1_220620	mRNA	ACA1_220620	NW_004457380.1	932973	934508	R	ACA1_220620	complement(join(<932973..933437,933504..933594,933651..933795,933868..933985,934073..934199,934255..>934508))	Acanthamoeba castellanii str. Neff	14915952
ACA1_220630	mRNA	ACA1_220630	NW_004457380.1	934549	936102	R	ACA1_220630	complement(join(<934549..934717,934800..934939,935066..935365,935463..935609,935711..935748,935839..935949,936033..>936102))	Acanthamoeba castellanii str. Neff	14915953
ACA1_220640	mRNA	ACA1_220640	NW_004457380.1	936167	936887	R	ACA1_220640	complement(join(<936167..936407,936510..936603,936680..>936887))	Acanthamoeba castellanii str. Neff	14915954
ACA1_220650	mRNA	ACA1_220650	NW_004457380.1	937426	939071	R	ACA1_220650	complement(join(<937426..937599,937689..937721,937824..937948,938065..938093,938226..938307,938431..938449,938560..938621,938799..938820,938997..>939071))	Acanthamoeba castellanii str. Neff	14915955
ACA1_220660	mRNA	ACA1_220660	NW_004457380.1	939552	941360	R	ACA1_220660	complement(join(<939552..939748,939850..940012,940103..940230,940327..940536,940637..940917,941028..941123,941251..>941360))	Acanthamoeba castellanii str. Neff	14915956
ACA1_220670	mRNA	ACA1_220670	NW_004457380.1	941428	943152	R	ACA1_220670	complement(join(<941428..942185,942291..942411,942525..942647,942688..942970,943106..>943152))	Acanthamoeba castellanii str. Neff	14915881
ACA1_220680	mRNA	ACA1_220680	NW_004457380.1	943247	945204	D	ACA1_220680	join(<943247..943902,944007..944166,944269..944353,944458..945039,945056..>945204)	Acanthamoeba castellanii str. Neff	14915882
ACA1_220690	mRNA	ACA1_220690	NW_004457380.1	945663	946681	R	ACA1_220690	complement(join(<945663..945842,945946..946138,946260..946373,946476..>946681))	Acanthamoeba castellanii str. Neff	14915883
ACA1_220700	mRNA	ACA1_220700	NW_004457380.1	947312	949228	D	ACA1_220700	join(<947312..947480,947550..947707,947764..947835,947910..947997,948076..948223,948295..948412,948483..948585,948655..948756,948848..948996,949064..>949228)	Acanthamoeba castellanii str. Neff	14915884
ACA1_220710	mRNA	ACA1_220710	NW_004457380.1	949630	950934	D	ACA1_220710	join(<949630..949744,949831..950006,950112..950349,950441..950625,950728..>950934)	Acanthamoeba castellanii str. Neff	14915885
ACA1_220720	mRNA	ACA1_220720	NW_004457380.1	953132	955161	D	ACA1_220720	join(<953132..953567,953612..>955161)	Acanthamoeba castellanii str. Neff	14915886
ACA1_220730	mRNA	ACA1_220730	NW_004457380.1	955354	957140	R	ACA1_220730	complement(join(<955354..955583,955669..955965,956132..957058,957125..>957140))	Acanthamoeba castellanii str. Neff	14915887
ACA1_220740	mRNA	ACA1_220740	NW_004457380.1	959126	959908	D	ACA1_220740	join(<959126..959233,959411..959726,959808..>959908)	Acanthamoeba castellanii str. Neff	14915888
ACA1_220750	mRNA	ACA1_220750	NW_004457380.1	960054	961416	R	ACA1_220750	complement(join(<960054..960472,960580..960718,960835..960918,960987..961082,961229..961287,961347..>961416))	Acanthamoeba castellanii str. Neff	14915889
ACA1_220760	mRNA	ACA1_220760	NW_004457380.1	961897	962902	R	ACA1_220760	complement(join(<961897..961970,962050..962215,962299..962387,962459..962569,962636..962771,962870..>962902))	Acanthamoeba castellanii str. Neff	14915890
ACA1_220770	mRNA	ACA1_220770	NW_004457380.1	963357	964392	R	ACA1_220770	complement(join(<963357..963488,963565..963845,963939..964115,964311..>964392))	Acanthamoeba castellanii str. Neff	14915891
ACA1_220780	mRNA	ACA1_220780	NW_004457380.1	964953	969368	D	ACA1_220780	join(<964953..965156,965341..965579,965659..965979,966175..966577,966658..966748,966970..967036,967215..967288,967380..967490,967585..967700,967813..967954,968040..968110,968233..968308,968423..968514,968604..968851,968934..969050,969134..969209,969306..>969368)	Acanthamoeba castellanii str. Neff	14915892
ACA1_220790	mRNA	ACA1_220790	NW_004457380.1	969742	971487	D	ACA1_220790	join(<969742..971003,971211..>971487)	Acanthamoeba castellanii str. Neff	14915893
ACA1_220900	mRNA	ACA1_220900	NW_004457380.1	971870	975041	R	ACA1_220900	complement(join(<971870..971956,972043..972138,972232..972326,972417..972594,972738..973534,973698..973826,973903..974005,974082..974144,974241..974379,974455..974897,975024..>975041))	Acanthamoeba castellanii str. Neff	14915894
ACA1_221010	mRNA	ACA1_221010	NW_004457380.1	975552	976925	D	ACA1_221010	<975552..>976925	Acanthamoeba castellanii str. Neff	14915895
ACA1_221020	mRNA	ACA1_221020	NW_004457380.1	977305	981571	R	ACA1_221020	complement(join(<977305..977391,977476..977571,977665..977759,977844..978021,978116..978903,979087..979131,979200..979709,979861..979956,980013..980141,980218..980320,980393..980455,980552..980690,980778..981223,981354..981487,981556..>981571))	Acanthamoeba castellanii str. Neff	14915605
ACA1_221030	mRNA	ACA1_221030	NW_004457380.1	981743	982894	R	ACA1_221030	complement(join(<981743..981908,981957..982040,982108..982208,982283..982349,982410..982492,982572..982682,982775..>982894))	Acanthamoeba castellanii str. Neff	14915606
ACA1_221040	mRNA	ACA1_221040	NW_004457380.1	984224	984704	D	ACA1_221040	join(<984224..984481,984561..>984704)	Acanthamoeba castellanii str. Neff	14915607
ACA1_221050	mRNA	ACA1_221050	NW_004457380.1	985027	987607	R	ACA1_221050	complement(join(<985027..985167,985357..985422,985506..985556,985685..985774,985952..985996,986071..986157,986243..986359,986438..986533,986599..986656,986756..986819,986900..987080,987155..987226,987314..>987607))	Acanthamoeba castellanii str. Neff	14915608
ACA1_221060	mRNA	ACA1_221060	NW_004457380.1	987785	990132	R	ACA1_221060	complement(join(<987785..988294,988379..988629,988705..988839,988954..989055,989127..989276,989336..989515,989587..989758,989836..>990132))	Acanthamoeba castellanii str. Neff	14915609
ACA1_221070	mRNA	ACA1_221070	NW_004457380.1	990473	992564	D	ACA1_221070	join(<990473..990584,990725..990772,990905..990984,991229..991320,991396..991477,991544..991657,991740..991801,991870..991939,992021..992132,992277..992396,992497..>992564)	Acanthamoeba castellanii str. Neff	14915610
ACA1_221080	mRNA	ACA1_221080	NW_004457380.1	993118	996755	D	ACA1_221080	join(<993118..993633,993757..996407,996497..996562,996638..>996755)	Acanthamoeba castellanii str. Neff	14915611
ACA1_221090	mRNA	ACA1_221090	NW_004457380.1	997041	997930	R	ACA1_221090	complement(join(<997041..997258,997341..997413,997497..997606,997682..997736,997925..>997930))	Acanthamoeba castellanii str. Neff	14915612
ACA1_221200	mRNA	ACA1_221200	NW_004457380.1	1004237	1005050	D	ACA1_221200	join(<1004237..1004648,1004839..>1005050)	Acanthamoeba castellanii str. Neff	14915613
ACA1_221210	mRNA	ACA1_221210	NW_004457380.1	1005361	1007011	D	ACA1_221210	join(<1005361..1006320,1006398..1006484,1006556..1006639,1006707..1006794,1006887..>1007011)	Acanthamoeba castellanii str. Neff	14915614
ACA1_221320	mRNA	ACA1_221320	NW_004457380.1	1013276	1013662	D	ACA1_221320	join(<1013276..1013359,1013468..>1013662)	Acanthamoeba castellanii str. Neff	14915615
ACA1_221330	mRNA	ACA1_221330	NW_004457380.1	1013739	1017219	R	ACA1_221330	complement(join(<1013739..1014754,1014830..1014884,1014916..1014922,1014991..1015081,1015162..1015224,1015510..1015584,1015680..1015775,1015847..1015942,1016047..1016124,1016211..1016264,1016376..1016453,1016587..1016699,1016882..1017029,1017165..>1017219))	Acanthamoeba castellanii str. Neff	14915616
ACA1_221350	mRNA	ACA1_221350	NW_004457380.1	1020495	1022983	D	ACA1_221350	join(<1020495..1020756,1020906..1021006,1021134..1021256,1021339..1021437,1021632..1021737,1021832..1022025,1022132..1022324,1022434..1022515,1022636..1022755,1022884..>1022983)	Acanthamoeba castellanii str. Neff	14915618
ACA1_221360	mRNA	ACA1_221360	NW_004457380.1	1023061	1024938	D	ACA1_221360	join(<1023061..1023159,1023255..1023419,1023542..1023607,1023866..1024049,1024155..1024377,1024438..1024550,1024655..1024747,1024841..>1024938)	Acanthamoeba castellanii str. Neff	14915619
ACA1_221370	mRNA	ACA1_221370	NW_004457380.1	1025075	1026435	D	ACA1_221370	join(<1025075..1025298,1025412..1025549,1025683..1026002,1026126..1026203,1026332..>1026435)	Acanthamoeba castellanii str. Neff	14915603
ACA1_011260	mRNA	ACA1_011260	NW_004457379.1	33	2953	D	ACA1_011260	join(<33..179,401..551,651..946,1124..1530,1688..1849,1971..2103,2188..2397,2529..2753,2873..>2953)	Acanthamoeba castellanii str. Neff	14915582
ACA1_011270	mRNA	ACA1_011270	NW_004457379.1	4281	6962	R	ACA1_011270	complement(join(<4281..4454,4543..4706,4785..4881,4951..5055,5145..5387,5511..5600,5696..5814,5921..6074,6174..6307,6373..6469,6572..6645,6752..>6962))	Acanthamoeba castellanii str. Neff	14915583
ACA1_011280	mRNA	ACA1_011280	NW_004457379.1	7180	10217	D	ACA1_011280	join(<7180..7509,7637..7698,7769..7877,7960..8050,8124..8206,8282..8404,8500..8736,8823..8926,9020..9152,9313..9478,9594..9713,9843..9990,10079..>10217)	Acanthamoeba castellanii str. Neff	14915581
ACA1_299160	mRNA	ACA1_299160	NW_004457378.1	7265	8250	D	ACA1_299160	join(<7265..7291,7360..7455,7560..7710,7822..7938,8026..8068,8148..>8250)	Acanthamoeba castellanii str. Neff	14915580
ACA1_299270	mRNA	ACA1_299270	NW_004457378.1	8788	9441	D	ACA1_299270	join(<8788..8928,9145..>9441)	Acanthamoeba castellanii str. Neff	14915578
ACA1_299380	mRNA	ACA1_299380	NW_004457378.1	11192	14568	D	ACA1_299380	join(<11192..11354,11420..11667,11747..11848,11886..12070,12142..12828,13880..14025,14094..14190,14265..>14568)	Acanthamoeba castellanii str. Neff	14915579
ACA1_019580	mRNA	ACA1_019580	NW_004457377.1	13903	14599	D	ACA1_019580	join(<13903..14274,14387..>14599)	Acanthamoeba castellanii str. Neff	14915574
ACA1_019590	mRNA	ACA1_019590	NW_004457377.1	14747	15269	D	ACA1_019590	join(<14747..14790,14882..15136,15221..>15269)	Acanthamoeba castellanii str. Neff	14915569
ACA1_019600	mRNA	ACA1_019600	NW_004457377.1	16856	19155	D	ACA1_019600	join(<16856..16978,17111..17301,17391..17529,17598..17680,17789..18030,18103..18203,18291..18391,18491..18572,18664..18846,18932..19013,19082..>19155)	Acanthamoeba castellanii str. Neff	14915577
ACA1_019610	mRNA	ACA1_019610	NW_004457377.1	19295	25070	R	ACA1_019610	complement(join(<19295..20000,20099..20246,20397..20536,20612..21628,21717..22082,22249..22521,22627..22775,22897..22986,23078..23377,23528..23692,23802..24185,24319..24671,24884..>25070))	Acanthamoeba castellanii str. Neff	14915575
ACA1_019620	mRNA	ACA1_019620	NW_004457377.1	26042	27466	D	ACA1_019620	join(<26042..26097,26193..26308,26434..26523,26616..>27466)	Acanthamoeba castellanii str. Neff	14915576
ACA1_019630	mRNA	ACA1_019630	NW_004457377.1	27804	28953	D	ACA1_019630	join(<27804..27938,27988..28060,28074..28767,28857..>28953)	Acanthamoeba castellanii str. Neff	14915570
ACA1_019640	mRNA	ACA1_019640	NW_004457377.1	29196	29590	R	ACA1_019640	complement(join(<29196..29238,29311..29407,29506..>29590))	Acanthamoeba castellanii str. Neff	14915571
ACA1_019650	mRNA	ACA1_019650	NW_004457377.1	29735	31721	D	ACA1_019650	join(<29735..30010,30075..30446,30526..30612,30726..30757,30846..31159,31248..31334,31457..31563,31662..>31721)	Acanthamoeba castellanii str. Neff	14915572
ACA1_019760	mRNA	ACA1_019760	NW_004457377.1	34852	35088	D	ACA1_019760	<34852..>35088	Acanthamoeba castellanii str. Neff	14915573
ACA1_050860	mRNA	ACA1_050860	NW_004457376.1	502	880	R	ACA1_050860	complement(join(<502..581,667..>880))	Acanthamoeba castellanii str. Neff	14915544
ACA1_050870	mRNA	ACA1_050870	NW_004457376.1	1061	1502	D	ACA1_050870	join(<1061..1230,1286..>1502)	Acanthamoeba castellanii str. Neff	14915568
ACA1_050880	mRNA	ACA1_050880	NW_004457376.1	1802	2734	D	ACA1_050880	join(<1802..2228,2305..2381,2442..2597,2650..>2734)	Acanthamoeba castellanii str. Neff	14915537
ACA1_050990	mRNA	ACA1_050990	NW_004457376.1	2896	3605	D	ACA1_050990	join(<2896..3034,3106..3172,3214..3353,3421..>3605)	Acanthamoeba castellanii str. Neff	14915538
ACA1_051000	mRNA	ACA1_051000	NW_004457376.1	3733	4192	D	ACA1_051000	join(<3733..3900,3979..4128,4151..>4192)	Acanthamoeba castellanii str. Neff	14915539
ACA1_051110	mRNA	ACA1_051110	NW_004457376.1	6248	7273	D	ACA1_051110	join(<6248..6496,6560..6773,6840..>7273)	Acanthamoeba castellanii str. Neff	14915540
ACA1_051220	mRNA	ACA1_051220	NW_004457376.1	9219	9988	D	ACA1_051220	join(<9219..9507,9598..9730,9817..>9988)	Acanthamoeba castellanii str. Neff	14915541
ACA1_051440	mRNA	ACA1_051440	NW_004457376.1	12423	16133	D	ACA1_051440	join(<12423..12553,12675..13241,13368..13773,13878..14149,14213..14345,14440..14572,14705..14814,14990..15151,15236..15553,15691..15747,15813..15902,15966..>16133)	Acanthamoeba castellanii str. Neff	14915543
ACA1_051450	mRNA	ACA1_051450	NW_004457376.1	16210	18094	R	ACA1_051450	complement(join(<16210..16391,16474..16584,16652..16833,16971..17108,17213..17304,17398..17583,17659..17719,17775..>18094))	Acanthamoeba castellanii str. Neff	14915557
ACA1_051460	mRNA	ACA1_051460	NW_004457376.1	18278	18569	R	ACA1_051460	complement(join(<18278..18415,18495..>18569))	Acanthamoeba castellanii str. Neff	14915558
ACA1_051470	mRNA	ACA1_051470	NW_004457376.1	18817	19202	R	ACA1_051470	complement(join(<18817..18911,19004..>19202))	Acanthamoeba castellanii str. Neff	14915559
ACA1_051490	mRNA	ACA1_051490	NW_004457376.1	21739	22860	R	ACA1_051490	complement(join(<21739..21801,21867..22396,22473..>22860))	Acanthamoeba castellanii str. Neff	14915561
ACA1_051500	mRNA	ACA1_051500	NW_004457376.1	24258	25409	D	ACA1_051500	<24258..>25409	Acanthamoeba castellanii str. Neff	14915562
ACA1_051510	mRNA	ACA1_051510	NW_004457376.1	25692	26450	R	ACA1_051510	complement(<25692..>26450)	Acanthamoeba castellanii str. Neff	14915563
ACA1_051520	mRNA	ACA1_051520	NW_004457376.1	26572	27201	R	ACA1_051520	complement(join(<26572..26750,26934..>27201))	Acanthamoeba castellanii str. Neff	14915564
ACA1_051530	mRNA	ACA1_051530	NW_004457376.1	27832	31060	R	ACA1_051530	complement(join(<27832..28047,28130..28179,28241..28367,28456..28568,28660..28737,28819..28885,28991..29091,29190..29744,29841..29949,30021..30114,30201..30293,30443..30496,30570..>31060))	Acanthamoeba castellanii str. Neff	14915565
ACA1_051540	mRNA	ACA1_051540	NW_004457376.1	31525	35130	R	ACA1_051540	complement(join(<31525..31690,31770..31854,31942..32065,32149..32241,32312..32566,32655..32913,33004..33160,33246..33399,33664..33711,33813..34073,34148..34245,34323..>35130))	Acanthamoeba castellanii str. Neff	14915566
ACA1_051550	mRNA	ACA1_051550	NW_004457376.1	35797	37520	R	ACA1_051550	complement(join(<35797..35889,35958..36158,36243..36338,36413..36675,36762..37118,37211..>37520))	Acanthamoeba castellanii str. Neff	14915567
ACA1_051660	mRNA	ACA1_051660	NW_004457376.1	42038	45427	R	ACA1_051660	complement(join(<42038..42240,42307..42323,42405..42488,42568..42628,42733..42945,43016..43100,43141..43242,43273..43346,43429..43501,43582..43740,43820..43915,43985..44203,44271..44331,44397..44552,44624..44665,44725..44893,44956..45019,45102..45158,45218..45306,45382..>45427))	Acanthamoeba castellanii str. Neff	14915527
ACA1_051670	mRNA	ACA1_051670	NW_004457376.1	45956	47841	R	ACA1_051670	complement(join(<45956..46097,46164..46300,46377..46882,46951..47146,47215..47343,47443..47540,47619..>47841))	Acanthamoeba castellanii str. Neff	14915528
ACA1_051680	mRNA	ACA1_051680	NW_004457376.1	48080	49834	D	ACA1_051680	join(<48080..48175,48251..48348,48407..48486,48560..48795,48869..49001,49083..49145,49217..49510,49604..49738,49773..>49834)	Acanthamoeba castellanii str. Neff	14915529
ACA1_051690	mRNA	ACA1_051690	NW_004457376.1	50176	51241	R	ACA1_051690	complement(join(<50176..50313,50402..50494,50553..50747,50855..51043,51137..>51241))	Acanthamoeba castellanii str. Neff	14915530
ACA1_051700	mRNA	ACA1_051700	NW_004457376.1	51320	54365	D	ACA1_051700	join(<51320..51480,51548..51591,51694..51800,51902..51992,52077..52173,52260..52394,52491..52608,52768..52935,53016..53094,53191..53303,53394..53537,53625..53755,53831..53909,54022..54278,54344..>54365)	Acanthamoeba castellanii str. Neff	14915531
ACA1_051710	mRNA	ACA1_051710	NW_004457376.1	54758	58304	R	ACA1_051710	complement(join(<54758..54883,55006..55443,55581..55748,56143..56427,56522..56598,56753..>58304))	Acanthamoeba castellanii str. Neff	14915532
ACA1_051820	mRNA	ACA1_051820	NW_004457376.1	58613	59098	D	ACA1_051820	join(<58613..58636,58742..58958,59028..>59098)	Acanthamoeba castellanii str. Neff	14915533
ACA1_051830	mRNA	ACA1_051830	NW_004457376.1	59285	60160	R	ACA1_051830	complement(join(<59285..59329,59402..59627,59695..59809,59866..59996,60047..60119,60142..>60160))	Acanthamoeba castellanii str. Neff	14915534
ACA1_051840	mRNA	ACA1_051840	NW_004457376.1	60752	62858	R	ACA1_051840	complement(join(<60752..60925,61006..61982,62066..62620,62696..>62858))	Acanthamoeba castellanii str. Neff	14915535
ACA1_051850	mRNA	ACA1_051850	NW_004457376.1	63136	64814	D	ACA1_051850	join(<63136..63247,63317..63483,63577..63703,63785..64192,64279..>64814)	Acanthamoeba castellanii str. Neff	14915536
ACA1_051860	mRNA	ACA1_051860	NW_004457376.1	65320	68138	D	ACA1_051860	join(<65320..65538,65617..65751,65840..65980,66097..66354,66432..>68138)	Acanthamoeba castellanii str. Neff	14915545
ACA1_051870	mRNA	ACA1_051870	NW_004457376.1	68734	70518	D	ACA1_051870	join(<68734..68782,68827..68893,68967..69174,69246..69354,69428..69926,70003..70145,70220..>70518)	Acanthamoeba castellanii str. Neff	14915546
ACA1_051880	mRNA	ACA1_051880	NW_004457376.1	70979	71594	R	ACA1_051880	complement(join(<70979..71070,71180..71298,71364..71472,71561..>71594))	Acanthamoeba castellanii str. Neff	14915547
ACA1_051890	mRNA	ACA1_051890	NW_004457376.1	72090	76286	D	ACA1_051890	join(<72090..72302,72370..72822,72967..73236,73317..73429,73512..73686,73802..73945,74032..74241,74322..74606,74712..75259,75366..75597,75678..75843,75915..75985,76146..>76286)	Acanthamoeba castellanii str. Neff	14915548
ACA1_051900	mRNA	ACA1_051900	NW_004457376.1	76351	79634	D	ACA1_051900	join(<76351..76467,76572..77837,77928..78060,78226..78427,78547..78679,79170..79264,79374..79506,79584..>79634)	Acanthamoeba castellanii str. Neff	14915549
ACA1_051910	mRNA	ACA1_051910	NW_004457376.1	79796	84221	R	ACA1_051910	complement(join(<79796..79915,79992..80168,80238..80297,80400..81138,81257..81363,81482..81566,81638..81810,81909..82237,82318..82512,82597..82676,82782..83176,83289..83441,83541..83639,83710..83822,83908..83993,84133..>84221))	Acanthamoeba castellanii str. Neff	14915550
ACA1_051920	mRNA	ACA1_051920	NW_004457376.1	85125	87460	D	ACA1_051920	join(<85125..85346,85560..85639,85733..85814,85885..85977,86067..86186,86269..86344,86430..86481,86587..86662,86753..86845,86942..87076,87179..87260,87342..>87460)	Acanthamoeba castellanii str. Neff	14915551
ACA1_051930	mRNA	ACA1_051930	NW_004457376.1	87895	88578	D	ACA1_051930	join(<87895..88419,88534..>88578)	Acanthamoeba castellanii str. Neff	14915552
ACA1_051940	mRNA	ACA1_051940	NW_004457376.1	88833	90471	R	ACA1_051940	complement(join(<88833..88988,89131..89350,89420..89741,89825..89903,89950..90119,90192..90236,90294..>90471))	Acanthamoeba castellanii str. Neff	14915553
ACA1_051950	mRNA	ACA1_051950	NW_004457376.1	90729	91004	R	ACA1_051950	complement(<90729..>91004)	Acanthamoeba castellanii str. Neff	14915554
ACA1_052060	mRNA	ACA1_052060	NW_004457376.1	96459	96749	D	ACA1_052060	<96459..>96749	Acanthamoeba castellanii str. Neff	14915555
ACA1_052070	mRNA	ACA1_052070	NW_004457376.1	97097	97683	D	ACA1_052070	join(<97097..97235,97309..97515,97583..>97683)	Acanthamoeba castellanii str. Neff	14915556
ACA1_325100	mRNA	ACA1_325100	NW_004457375.1	104	3334	D	ACA1_325100	join(<104..739,815..966,1053..1237,1365..1585,1733..1921,2025..2161,2242..2505,2623..3064,3203..>3334)	Acanthamoeba castellanii str. Neff	14915526
ACA1_325110	mRNA	ACA1_325110	NW_004457375.1	3479	4962	R	ACA1_325110	complement(join(<3479..3646,3822..4005,4131..4281,4356..4490,4579..4629,4698..>4962))	Acanthamoeba castellanii str. Neff	14915525
ACA1_325120	mRNA	ACA1_325120	NW_004457375.1	5195	7059	R	ACA1_325120	complement(join(<5195..5581,5667..5804,6034..6142,6263..6347,6436..6623,6701..>7059))	Acanthamoeba castellanii str. Neff	14915505
ACA1_325130	mRNA	ACA1_325130	NW_004457375.1	7318	8206	R	ACA1_325130	complement(join(<7318..7524,7605..7702,7789..8022,8134..>8206))	Acanthamoeba castellanii str. Neff	14915506
ACA1_325140	mRNA	ACA1_325140	NW_004457375.1	8365	10127	R	ACA1_325140	complement(join(<8365..8516,8636..8727,8819..8958,9067..9172,9305..9380,9455..9620,9662..9738,9842..>10127))	Acanthamoeba castellanii str. Neff	14915507
ACA1_325150	mRNA	ACA1_325150	NW_004457375.1	10580	11769	D	ACA1_325150	join(<10580..10629,10701..10827,10948..11025,11138..11281,11389..11453,11529..11609,11697..>11769)	Acanthamoeba castellanii str. Neff	14915508
ACA1_325160	mRNA	ACA1_325160	NW_004457375.1	12052	13586	D	ACA1_325160	join(<12052..12095,12295..12370,12441..12497,12735..12809,12975..13046,13165..13226,13338..13430,13505..>13586)	Acanthamoeba castellanii str. Neff	14915509
ACA1_325170	mRNA	ACA1_325170	NW_004457375.1	13829	15600	R	ACA1_325170	complement(join(<13829..14063,14195..14416,14538..15371,15566..>15600))	Acanthamoeba castellanii str. Neff	14915510
ACA1_325180	mRNA	ACA1_325180	NW_004457375.1	15967	18247	R	ACA1_325180	complement(join(<15967..17009,17098..17183,17279..17375,17467..17695,17778..17849,17933..>18247))	Acanthamoeba castellanii str. Neff	14915511
ACA1_325190	mRNA	ACA1_325190	NW_004457375.1	18459	18924	D	ACA1_325190	join(<18459..18515,18616..18683,18759..>18924)	Acanthamoeba castellanii str. Neff	14915512
ACA1_325210	mRNA	ACA1_325210	NW_004457375.1	27924	31704	D	ACA1_325210	join(<27924..28259,28589..28784,28891..29048,29160..29303,29418..29570,29652..29780,29959..30088,30175..30308,30395..30781,30893..31057,31213..31417,31538..>31704)	Acanthamoeba castellanii str. Neff	14915514
ACA1_325220	mRNA	ACA1_325220	NW_004457375.1	31938	33445	R	ACA1_325220	complement(join(<31938..32369,32549..32710,32794..32977,33071..33198,33263..>33445))	Acanthamoeba castellanii str. Neff	14915515
ACA1_325230	mRNA	ACA1_325230	NW_004457375.1	33614	34324	R	ACA1_325230	complement(join(<33614..33813,33909..34101,34208..>34324))	Acanthamoeba castellanii str. Neff	14915516
ACA1_325240	mRNA	ACA1_325240	NW_004457375.1	35075	36612	D	ACA1_325240	join(<35075..35095,35232..35319,35720..35838,35932..>36612)	Acanthamoeba castellanii str. Neff	14915517
ACA1_325250	mRNA	ACA1_325250	NW_004457375.1	36908	37425	D	ACA1_325250	join(<36908..36919,37029..37134,37220..>37425)	Acanthamoeba castellanii str. Neff	14915518
ACA1_325260	mRNA	ACA1_325260	NW_004457375.1	37844	43450	D	ACA1_325260	join(<37844..37923,38027..38183,38357..38470,38580..38753,38859..38988,39066..39583,39728..39977,40063..40178,40272..40561,40626..43058,43159..>43450)	Acanthamoeba castellanii str. Neff	14915519
ACA1_325270	mRNA	ACA1_325270	NW_004457375.1	43653	45214	R	ACA1_325270	complement(join(<43653..43894,44002..44267,44387..44441,44511..44683,44833..44959,45052..>45214))	Acanthamoeba castellanii str. Neff	14915520
ACA1_325290	mRNA	ACA1_325290	NW_004457375.1	50082	51527	R	ACA1_325290	complement(join(<50082..50161,50248..50584,50668..50751,50781..50953,51082..51234,51368..>51527))	Acanthamoeba castellanii str. Neff	14915522
ACA1_325300	mRNA	ACA1_325300	NW_004457375.1	51609	54072	R	ACA1_325300	complement(join(<51609..51781,51846..51984,52090..52217,52378..52495,52628..52729,53079..53169,53278..53443,53541..53637,53743..>54072))	Acanthamoeba castellanii str. Neff	14915523
ACA1_325310	mRNA	ACA1_325310	NW_004457375.1	54188	55516	D	ACA1_325310	join(<54188..54479,54628..54866,54946..55138,55230..>55516)	Acanthamoeba castellanii str. Neff	14915524
ACA1_306670	mRNA	ACA1_306670	NW_004457374.1	8	2798	R	ACA1_306670	complement(join(<8..157,240..295,413..556,626..842,1004..1096,1218..1316,1389..1480,1561..1648,1714..1788,1900..2100,2226..2294,2712..>2798))	Acanthamoeba castellanii str. Neff	14915504
ACA1_306680	mRNA	ACA1_306680	NW_004457374.1	2937	4761	D	ACA1_306680	join(<2937..3024,3118..3297,3377..3424,3564..3647,3728..3810,3899..4001,4107..4215,4345..4388,4475..4614,4702..>4761)	Acanthamoeba castellanii str. Neff	14915491
ACA1_306690	mRNA	ACA1_306690	NW_004457374.1	4952	6277	R	ACA1_306690	complement(join(<4952..5095,5182..5321,5430..5555,5648..5730,5854..5997,6165..>6277))	Acanthamoeba castellanii str. Neff	14915501
ACA1_306700	mRNA	ACA1_306700	NW_004457374.1	6404	8608	D	ACA1_306700	join(<6404..6542,6704..6831,7357..7366,7449..7515,7666..7734,7867..7946,8102..8189,8275..8439,8557..>8608)	Acanthamoeba castellanii str. Neff	14915502
ACA1_306810	mRNA	ACA1_306810	NW_004457374.1	9170	11461	D	ACA1_306810	join(<9170..9636,9731..9785,9876..10091,10186..10314,10459..10503,10602..11246,11327..>11461)	Acanthamoeba castellanii str. Neff	14915503
ACA1_306820	mRNA	ACA1_306820	NW_004457374.1	11661	12343	R	ACA1_306820	complement(join(<11661..12182,12308..>12343))	Acanthamoeba castellanii str. Neff	14915492
ACA1_306830	mRNA	ACA1_306830	NW_004457374.1	12871	14464	R	ACA1_306830	complement(join(<12871..13027,13095..>14464))	Acanthamoeba castellanii str. Neff	14915493
ACA1_306840	mRNA	ACA1_306840	NW_004457374.1	16186	19938	D	ACA1_306840	join(<16186..16589,16681..16847,16973..17040,17095..17533,17629..17866,17945..18142,18223..18316,18416..18559,18694..18793,18877..19063,19167..19305,19475..19565,19637..>19938)	Acanthamoeba castellanii str. Neff	14915494
ACA1_306850	mRNA	ACA1_306850	NW_004457374.1	20031	21107	D	ACA1_306850	join(<20031..20214,20363..20589,20678..20789,20861..20973,21054..>21107)	Acanthamoeba castellanii str. Neff	14915495
ACA1_306860	mRNA	ACA1_306860	NW_004457374.1	21437	21874	R	ACA1_306860	complement(<21437..>21874)	Acanthamoeba castellanii str. Neff	14915496
ACA1_306870	mRNA	ACA1_306870	NW_004457374.1	22508	23426	D	ACA1_306870	join(<22508..22604,22682..22707,22799..22984,23066..23219,23347..>23426)	Acanthamoeba castellanii str. Neff	14915497
ACA1_306880	mRNA	ACA1_306880	NW_004457374.1	23491	24872	R	ACA1_306880	complement(join(<23491..23700,23826..>24872))	Acanthamoeba castellanii str. Neff	14915498
ACA1_306890	mRNA	ACA1_306890	NW_004457374.1	25097	25951	R	ACA1_306890	complement(join(<25097..25759,25802..>25951))	Acanthamoeba castellanii str. Neff	14915499
ACA1_306900	mRNA	ACA1_306900	NW_004457374.1	26612	28207	R	ACA1_306900	complement(join(<26612..27361,27469..27716,27857..28096,28144..>28207))	Acanthamoeba castellanii str. Neff	14915500
ACA1_129210	mRNA	ACA1_129210	NW_004457373.1	181	1582	D	ACA1_129210	join(<181..250,356..799,862..972,1075..1170,1252..1382,1448..>1582)	Acanthamoeba castellanii str. Neff	14915445
ACA1_129220	mRNA	ACA1_129220	NW_004457373.1	1691	2398	D	ACA1_129220	join(<1691..2029,2105..>2398)	Acanthamoeba castellanii str. Neff	14915441
ACA1_129230	mRNA	ACA1_129230	NW_004457373.1	2900	3436	D	ACA1_129230	<2900..>3436	Acanthamoeba castellanii str. Neff	14915442
ACA1_129340	mRNA	ACA1_129340	NW_004457373.1	5591	6696	D	ACA1_129340	join(<5591..5656,5757..5810,5877..6027,6114..6133,6210..6286,6410..6522,6620..>6696)	Acanthamoeba castellanii str. Neff	14915443
ACA1_129350	mRNA	ACA1_129350	NW_004457373.1	8741	9920	D	ACA1_129350	join(<8741..8929,9054..9173,9238..9343,9408..9563,9632..9764,9827..>9920)	Acanthamoeba castellanii str. Neff	14915444
ACA1_129360	mRNA	ACA1_129360	NW_004457373.1	10065	10696	R	ACA1_129360	complement(join(<10065..10303,10329..10402,10659..>10696))	Acanthamoeba castellanii str. Neff	14915440
ACA1_129370	mRNA	ACA1_129370	NW_004457373.1	11095	12383	D	ACA1_129370	join(<11095..11133,11167..11272,11376..11464,11585..11680,11786..11892,11993..>12383)	Acanthamoeba castellanii str. Neff	14915426
ACA1_129380	mRNA	ACA1_129380	NW_004457373.1	12570	13155	D	ACA1_129380	join(<12570..12662,12753..12846,13025..>13155)	Acanthamoeba castellanii str. Neff	14915427
ACA1_129390	mRNA	ACA1_129390	NW_004457373.1	13818	16877	R	ACA1_129390	complement(join(<13818..13961,14083..14315,14410..14487,14569..14666,14742..14838,14963..15101,15252..15364,15443..15593,15605..15634,15697..15791,16007..16119,16205..16281,16386..16462,16567..16669,16755..>16877))	Acanthamoeba castellanii str. Neff	14915428
ACA1_129500	mRNA	ACA1_129500	NW_004457373.1	17344	18262	D	ACA1_129500	join(<17344..17666,17696..17789,17864..>18262)	Acanthamoeba castellanii str. Neff	14915429
ACA1_129510	mRNA	ACA1_129510	NW_004457373.1	18486	20151	D	ACA1_129510	join(<18486..18654,18717..18795,18889..18998,19073..19205,19298..19432,19506..19588,19664..19764,19843..19962,20044..>20151)	Acanthamoeba castellanii str. Neff	14915473
ACA1_129520	mRNA	ACA1_129520	NW_004457373.1	20246	23197	D	ACA1_129520	join(<20246..20272,20444..20644,20731..20788,20885..21031,21155..21255,21361..21436,21489..21604,21686..21740,21837..21906,21985..22058,22077..22223,22407..22488,22562..22744,22857..22977,23066..>23197)	Acanthamoeba castellanii str. Neff	14915474
ACA1_129530	mRNA	ACA1_129530	NW_004457373.1	23370	24323	D	ACA1_129530	join(<23370..23549,23817..23985,24085..>24323)	Acanthamoeba castellanii str. Neff	14915475
ACA1_129540	mRNA	ACA1_129540	NW_004457373.1	24381	28527	D	ACA1_129540	join(<24381..24616,24689..24769,24847..24907,25259..25389,25519..25578,25667..25754,25915..25984,26142..26368,26692..26892,26979..27036,27147..27293,27417..27517,27586..27661,27677..27837,27928..27982,28086..28155,28218..28254,28396..>28527)	Acanthamoeba castellanii str. Neff	14915476
ACA1_129550	mRNA	ACA1_129550	NW_004457373.1	28789	29776	R	ACA1_129550	complement(join(<28789..28800,28885..29032,29145..29319,29445..29571,29642..>29776))	Acanthamoeba castellanii str. Neff	14915477
ACA1_129560	mRNA	ACA1_129560	NW_004457373.1	29730	31142	D	ACA1_129560	join(<29730..29782,29978..30058,30144..30402,30521..30709,30809..30913,31107..>31142)	Acanthamoeba castellanii str. Neff	14915431
ACA1_129670	mRNA	ACA1_129670	NW_004457373.1	31350	35181	R	ACA1_129670	complement(join(<31350..31559,31654..31667,31692..32372,32459..32568,32662..35002,35127..>35181))	Acanthamoeba castellanii str. Neff	14915430
ACA1_129680	mRNA	ACA1_129680	NW_004457373.1	35688	37640	R	ACA1_129680	complement(join(<35688..35986,36055..36353,36443..36776,36851..37258,37376..>37640))	Acanthamoeba castellanii str. Neff	14915432
ACA1_129690	mRNA	ACA1_129690	NW_004457373.1	38582	42193	D	ACA1_129690	join(<38582..39830,39910..40324,40423..40525,40610..40720,40808..40915,41048..41118,41300..41411,41478..41591,41682..41795,41888..42004,42113..>42193)	Acanthamoeba castellanii str. Neff	14915433
ACA1_129700	mRNA	ACA1_129700	NW_004457373.1	42529	43105	D	ACA1_129700	join(<42529..42688,42767..>43105)	Acanthamoeba castellanii str. Neff	14915434
ACA1_129910	mRNA	ACA1_129910	NW_004457373.1	47211	47942	D	ACA1_129910	<47211..>47942	Acanthamoeba castellanii str. Neff	14915435
ACA1_129920	mRNA	ACA1_129920	NW_004457373.1	48040	49802	D	ACA1_129920	join(<48040..48082,48180..48330,48354..48378,48634..49062,49122..49379,49473..49542,49614..49667,49723..>49802)	Acanthamoeba castellanii str. Neff	14915436
ACA1_129930	mRNA	ACA1_129930	NW_004457373.1	49991	51229	D	ACA1_129930	join(<49991..50388,50500..>51229)	Acanthamoeba castellanii str. Neff	14915437
ACA1_129940	mRNA	ACA1_129940	NW_004457373.1	51334	53743	D	ACA1_129940	join(<51334..51456,51553..51666,51740..52867,52974..53265,53367..>53743)	Acanthamoeba castellanii str. Neff	14915438
ACA1_129950	mRNA	ACA1_129950	NW_004457373.1	54071	55817	R	ACA1_129950	complement(join(<54071..54108,54232..54393,54499..54570,54647..>55817))	Acanthamoeba castellanii str. Neff	14915439
ACA1_129960	mRNA	ACA1_129960	NW_004457373.1	56071	57778	R	ACA1_129960	complement(join(<56071..56195,56285..56971,57055..57217,57330..57437,57551..>57778))	Acanthamoeba castellanii str. Neff	14915478
ACA1_129970	mRNA	ACA1_129970	NW_004457373.1	59120	63174	D	ACA1_129970	join(<59120..59297,59402..59446,59542..59595,59814..59858,59954..60113,60220..60356,60442..60538,60679..60778,60910..61037,61106..61297,61444..61524,61629..61683,61777..61848,61946..62024,62178..62255,62347..62526,62607..62718,62796..62883,62974..>63174)	Acanthamoeba castellanii str. Neff	14915479
ACA1_130180	mRNA	ACA1_130180	NW_004457373.1	63478	65189	R	ACA1_130180	complement(join(<63478..63705,63817..63873,63946..64011,64113..64187,64281..64437,64534..64611,64704..64954,65145..>65189))	Acanthamoeba castellanii str. Neff	14915480
ACA1_130190	mRNA	ACA1_130190	NW_004457373.1	65086	66814	D	ACA1_130190	join(<65086..65343,65424..65501,65645..66094,66195..66317,66680..>66814)	Acanthamoeba castellanii str. Neff	14915482
ACA1_130300	mRNA	ACA1_130300	NW_004457373.1	67565	70457	R	ACA1_130300	complement(join(<67565..67942,68026..68249,68453..68519,68614..68756,68847..68996,69096..69174,69538..69740,69810..69941,70061..70195,70349..>70457))	Acanthamoeba castellanii str. Neff	14915481
ACA1_130310	mRNA	ACA1_130310	NW_004457373.1	71058	71318	R	ACA1_130310	complement(<71058..>71318)	Acanthamoeba castellanii str. Neff	14915483
ACA1_130420	mRNA	ACA1_130420	NW_004457373.1	71794	72344	D	ACA1_130420	join(<71794..71845,71909..72218,72278..>72344)	Acanthamoeba castellanii str. Neff	14915484
ACA1_130430	mRNA	ACA1_130430	NW_004457373.1	72798	73718	R	ACA1_130430	complement(<72798..>73718)	Acanthamoeba castellanii str. Neff	14915485
ACA1_130440	mRNA	ACA1_130440	NW_004457373.1	74481	75607	D	ACA1_130440	join(<74481..74594,74703..74792,74896..74968,75062..75117,75189..75268,75352..>75607)	Acanthamoeba castellanii str. Neff	14915486
ACA1_130450	mRNA	ACA1_130450	NW_004457373.1	75706	79273	R	ACA1_130450	complement(join(<75706..76187,76299..76752,76880..77082,77226..77292,77391..77533,77638..77787,77900..77978,78373..78575,78642..78773,78893..79027,79165..>79273))	Acanthamoeba castellanii str. Neff	14915487
ACA1_130460	mRNA	ACA1_130460	NW_004457373.1	79499	80165	R	ACA1_130460	complement(join(<79499..79864,79968..>80165))	Acanthamoeba castellanii str. Neff	14915488
ACA1_130470	mRNA	ACA1_130470	NW_004457373.1	81035	82634	D	ACA1_130470	join(<81035..81173,81247..81295,81399..81509,81592..81673,81777..81905,81965..82042,82105..82232,82330..82414,82491..>82634)	Acanthamoeba castellanii str. Neff	14915489
ACA1_130480	mRNA	ACA1_130480	NW_004457373.1	82776	87291	R	ACA1_130480	complement(join(<82776..82889,83040..83844,83940..84077,84161..84303,84380..84471,84542..84737,84925..85083,85172..85282,85409..85663,85900..86177,86270..86350,86422..86716,86913..87001,87105..>87291))	Acanthamoeba castellanii str. Neff	14915490
ACA1_130490	mRNA	ACA1_130490	NW_004457373.1	87720	90009	D	ACA1_130490	join(<87720..87805,87877..88014,88122..88175,88280..88372,88457..88603,88698..88798,88953..89170,89271..89412,89552..89709,89827..>90009)	Acanthamoeba castellanii str. Neff	14915446
ACA1_130500	mRNA	ACA1_130500	NW_004457373.1	90220	91260	R	ACA1_130500	complement(<90220..>91260)	Acanthamoeba castellanii str. Neff	14915447
ACA1_130510	mRNA	ACA1_130510	NW_004457373.1	91726	93096	D	ACA1_130510	join(<91726..91966,92040..92096,92208..92390,92557..92641,92814..>93096)	Acanthamoeba castellanii str. Neff	14915448
ACA1_130520	mRNA	ACA1_130520	NW_004457373.1	93702	101244	R	ACA1_130520	complement(join(<93702..93851,93973..94139,94231..94390,94480..94612,94734..94870,94974..95130,95350..95369,95472..95552,95660..95923,96029..96103,96247..96458,96546..96653,96728..96833,96955..97098,97173..97487,97593..97750,97888..98032,98109..98258,98350..98427,98579..98868,98954..99071,99157..99241,99392..99768,99840..99917,100011..100136,100292..100441,100533..100613,100707..100886,101056..>101244))	Acanthamoeba castellanii str. Neff	14915449
ACA1_130530	mRNA	ACA1_130530	NW_004457373.1	101391	103299	R	ACA1_130530	complement(join(<101391..101527,101600..101757,101870..102035,102142..102291,102406..103194,103275..>103299))	Acanthamoeba castellanii str. Neff	14915450
ACA1_130540	mRNA	ACA1_130540	NW_004457373.1	103997	105037	R	ACA1_130540	complement(<103997..>105037)	Acanthamoeba castellanii str. Neff	14915451
ACA1_130550	mRNA	ACA1_130550	NW_004457373.1	105455	107831	R	ACA1_130550	complement(join(<105455..105593,105688..105794,105863..105928,106043..106137,106230..106451,106528..106714,106822..107021,107116..107203,107346..107507,107572..107628,107691..>107831))	Acanthamoeba castellanii str. Neff	14915452
ACA1_130560	mRNA	ACA1_130560	NW_004457373.1	108031	109639	D	ACA1_130560	join(<108031..108117,108178..108248,108340..108441,108511..108654,108760..109030,109180..109384,109476..>109639)	Acanthamoeba castellanii str. Neff	14915453
ACA1_130570	mRNA	ACA1_130570	NW_004457373.1	109767	112763	R	ACA1_130570	complement(join(<109767..109906,109979..111140,111222..111383,111483..111701,111810..112014,112122..112311,112405..112517,112600..>112763))	Acanthamoeba castellanii str. Neff	14915454
ACA1_130580	mRNA	ACA1_130580	NW_004457373.1	113289	116740	R	ACA1_130580	complement(join(<113289..113359,113377..113484,113644..114058,114156..114339,114421..114581,114695..114753,114787..114934,115007..115264,115336..115749,115837..116469,116570..>116740))	Acanthamoeba castellanii str. Neff	14915455
ACA1_130590	mRNA	ACA1_130590	NW_004457373.1	117014	119018	R	ACA1_130590	complement(join(<117014..117305,117375..117793,117898..118341,118549..118708,118834..>119018))	Acanthamoeba castellanii str. Neff	14915456
ACA1_130600	mRNA	ACA1_130600	NW_004457373.1	119429	121117	R	ACA1_130600	complement(join(<119429..119633,119730..119851,119925..120010,120080..120153,120238..120315,120380..120479,120542..120629,120684..120732,120835..121004,121097..>121117))	Acanthamoeba castellanii str. Neff	14915457
ACA1_130610	mRNA	ACA1_130610	NW_004457373.1	121452	122283	D	ACA1_130610	join(<121452..121503,121581..121657,121747..121912,121971..122038,122137..>122283)	Acanthamoeba castellanii str. Neff	14915458
ACA1_130620	mRNA	ACA1_130620	NW_004457373.1	122734	125012	R	ACA1_130620	complement(join(<122734..122794,122889..122962,123074..123251,123326..123503,123661..123820,123919..124461,124544..124661,124816..>125012))	Acanthamoeba castellanii str. Neff	14915459
ACA1_130730	mRNA	ACA1_130730	NW_004457373.1	126087	127078	D	ACA1_130730	join(<126087..126180,126378..126596,126669..126745,126833..>127078)	Acanthamoeba castellanii str. Neff	14915460
ACA1_130840	mRNA	ACA1_130840	NW_004457373.1	129047	131557	D	ACA1_130840	join(<129047..129138,129473..129544,129647..129749,129838..129934,130178..130213,130372..130484,130550..130641,130784..130891,130968..131049,131160..131220,131354..131403,131522..>131557)	Acanthamoeba castellanii str. Neff	14915461
ACA1_130850	mRNA	ACA1_130850	NW_004457373.1	131851	136432	D	ACA1_130850	join(<131851..132059,132144..132196,132359..132459,132602..132741,132849..132993,133097..133155,133248..133315,133816..133883,133984..134172,134318..134382,134471..134550,134698..134839,134915..135033,135116..135236,135334..135462,135623..135998,136104..136154,136232..>136432)	Acanthamoeba castellanii str. Neff	14915462
ACA1_130960	mRNA	ACA1_130960	NW_004457373.1	136649	137523	R	ACA1_130960	complement(join(<136649..137057,137153..>137523))	Acanthamoeba castellanii str. Neff	14915463
ACA1_130970	mRNA	ACA1_130970	NW_004457373.1	138275	144373	D	ACA1_130970	join(<138275..138331,138463..138704,138792..138873,138958..139437,139507..139716,139788..140171,140238..140471,140540..140645,140725..140837,140908..141025,141106..141290,141411..141641,141770..142003,142090..142250,142313..142457,142524..142694,142845..143359,143435..144245,144287..>144373)	Acanthamoeba castellanii str. Neff	14915464
ACA1_130980	mRNA	ACA1_130980	NW_004457373.1	144650	145476	D	ACA1_130980	join(<144650..144830,145172..>145476)	Acanthamoeba castellanii str. Neff	14915465
ACA1_130990	mRNA	ACA1_130990	NW_004457373.1	145608	146604	R	ACA1_130990	complement(join(<145608..146267,146359..>146604))	Acanthamoeba castellanii str. Neff	14915466
ACA1_131000	mRNA	ACA1_131000	NW_004457373.1	146786	147831	R	ACA1_131000	complement(join(<146786..146870,146953..147056,147212..147342,147417..147497,147589..147661,147727..>147831))	Acanthamoeba castellanii str. Neff	14915467
ACA1_131010	mRNA	ACA1_131010	NW_004457373.1	148031	149442	R	ACA1_131010	complement(join(<148031..148131,148208..148348,148419..148595,148697..148869,148973..>149442))	Acanthamoeba castellanii str. Neff	14915468
ACA1_131020	mRNA	ACA1_131020	NW_004457373.1	150175	151719	D	ACA1_131020	<150175..>151719	Acanthamoeba castellanii str. Neff	14915469
ACA1_131030	mRNA	ACA1_131030	NW_004457373.1	151808	154752	R	ACA1_131030	complement(join(<151808..151967,152056..152141,152235..152320,152445..152484,152553..152621,152710..152748,152846..153058,153176..153253,153372..153416,153508..153611,153715..153796,153929..153991,154109..154225,154675..>154752))	Acanthamoeba castellanii str. Neff	14915470
ACA1_131040	mRNA	ACA1_131040	NW_004457373.1	155803	158528	D	ACA1_131040	join(<155803..155918,156027..156217,156311..156635,156708..156724,156836..157090,157172..157267,157351..157466,157562..157665,157742..157845,157923..158165,158296..158370,158452..>158528)	Acanthamoeba castellanii str. Neff	14915471
ACA1_131050	mRNA	ACA1_131050	NW_004457373.1	158678	161374	D	ACA1_131050	join(<158678..158885,159004..159488,159565..159683,159751..159962,160056..160228,160370..160445,160547..160603,160764..160822,161023..161184,161318..>161374)	Acanthamoeba castellanii str. Neff	14915472
ACA1_389830	mRNA	ACA1_389830	NW_004457372.1	32	1503	D	ACA1_389830	join(<32..174,297..443,544..725,813..>1503)	Acanthamoeba castellanii str. Neff	14915362
ACA1_389940	mRNA	ACA1_389940	NW_004457372.1	4742	7105	D	ACA1_389940	join(<4742..4760,4790..4888,4971..5096,5200..5294,5363..5418,5531..5637,5727..5845,5950..6016,6090..6185,6431..6494,6532..6713,6816..>7105)	Acanthamoeba castellanii str. Neff	14915391
ACA1_389950	mRNA	ACA1_389950	NW_004457372.1	7174	8703	R	ACA1_389950	complement(join(<7174..7288,7338..7457,7598..7704,7866..7976,8078..8224,8412..8532,8678..>8703))	Acanthamoeba castellanii str. Neff	14915411
ACA1_390060	mRNA	ACA1_390060	NW_004457372.1	12756	16766	D	ACA1_390060	join(<12756..12898,13003..13091,13165..13260,13337..13630,13714..13849,13959..14110,14195..14265,14367..14521,14589..14724,14797..15181,15279..15385,15446..15466,15901..16114,16220..16308,16382..16477,16575..>16766)	Acanthamoeba castellanii str. Neff	14915412
ACA1_390170	mRNA	ACA1_390170	NW_004457372.1	21807	29153	D	ACA1_390170	join(<21807..21996,22070..22218,22299..22565,22645..22857,22932..23192,23291..23468,23555..23731,23833..24286,24301..24552,24671..24838,24908..24974,25053..25194,25266..25490,25568..25730,25846..25973,26063..26395,26481..26769,26845..27239,27316..27451,27541..27666,28008..28096,28166..28641,28722..29013,29110..>29153)	Acanthamoeba castellanii str. Neff	14915363
ACA1_390280	mRNA	ACA1_390280	NW_004457372.1	29474	30085	R	ACA1_390280	complement(join(<29474..29611,29710..29841,29948..>30085))	Acanthamoeba castellanii str. Neff	14915364
ACA1_390290	mRNA	ACA1_390290	NW_004457372.1	30297	30655	D	ACA1_390290	join(<30297..30490,30574..>30655)	Acanthamoeba castellanii str. Neff	14915404
ACA1_390400	mRNA	ACA1_390400	NW_004457372.1	33456	34334	D	ACA1_390400	join(<33456..33603,33672..33811,33964..34089,34233..>34334)	Acanthamoeba castellanii str. Neff	14915405
ACA1_390410	mRNA	ACA1_390410	NW_004457372.1	34469	36681	R	ACA1_390410	complement(join(<34469..34780,34876..35040,35262..35350,35453..35551,35750..36138,36244..36401,36559..>36681))	Acanthamoeba castellanii str. Neff	14915406
ACA1_390420	mRNA	ACA1_390420	NW_004457372.1	36943	38969	D	ACA1_390420	join(<36943..37090,37233..37372,37525..37650,37755..38006,38078..38152,38275..38367,38456..38650,38775..>38969)	Acanthamoeba castellanii str. Neff	14915407
ACA1_390430	mRNA	ACA1_390430	NW_004457372.1	39285	42265	D	ACA1_390430	join(<39285..39480,39626..39741,39871..39975,40111..40346,40495..40627,40714..40802,40906..41038,41164..41317,41460..41550,41612..41677,41793..41916,42011..>42265)	Acanthamoeba castellanii str. Neff	14915408
ACA1_390440	mRNA	ACA1_390440	NW_004457372.1	42415	43338	R	ACA1_390440	complement(join(<42415..42656,42742..43033,43117..>43338))	Acanthamoeba castellanii str. Neff	14915409
ACA1_390450	mRNA	ACA1_390450	NW_004457372.1	43906	46094	D	ACA1_390450	join(<43906..45217,45244..>46094)	Acanthamoeba castellanii str. Neff	14915410
ACA1_390460	mRNA	ACA1_390460	NW_004457372.1	46195	47900	R	ACA1_390460	complement(join(<46195..46349,46363..46401,46441..46489,46602..46692,46769..46849,47013..47167,47359..47646,47736..>47900))	Acanthamoeba castellanii str. Neff	14915392
ACA1_390470	mRNA	ACA1_390470	NW_004457372.1	48016	50488	D	ACA1_390470	join(<48016..48293,48380..48467,48588..48675,48953..49070,49150..49247,49365..49705,49784..49891,49974..50133,50215..50342,50441..>50488)	Acanthamoeba castellanii str. Neff	14915393
ACA1_390480	mRNA	ACA1_390480	NW_004457372.1	51993	52832	D	ACA1_390480	<51993..>52832	Acanthamoeba castellanii str. Neff	14915394
ACA1_390500	mRNA	ACA1_390500	NW_004457372.1	53837	54822	D	ACA1_390500	join(<53837..53882,53988..54188,54264..54442,54529..>54822)	Acanthamoeba castellanii str. Neff	14915396
ACA1_390510	mRNA	ACA1_390510	NW_004457372.1	54971	55294	R	ACA1_390510	complement(<54971..>55294)	Acanthamoeba castellanii str. Neff	14915397
ACA1_390520	mRNA	ACA1_390520	NW_004457372.1	55417	56992	D	ACA1_390520	join(<55417..55681,55750..55796,55811..55901,55967..56097,56190..56249,56360..56535,56642..56707,56866..56890,56954..>56992)	Acanthamoeba castellanii str. Neff	14915398
ACA1_390530	mRNA	ACA1_390530	NW_004457372.1	57272	64232	D	ACA1_390530	join(<57272..58238,58328..58406,58515..58924,59049..59446,59633..59742,59829..60320,60439..60891,60987..61083,61164..61347,61459..61732,61880..62025,62111..62277,62354..62512,62608..62760,62859..63033,63151..>64232)	Acanthamoeba castellanii str. Neff	14915399
ACA1_390540	mRNA	ACA1_390540	NW_004457372.1	64522	66838	D	ACA1_390540	join(<64522..65007,65095..65225,65415..65784,65853..66173,66266..66373,66446..>66838)	Acanthamoeba castellanii str. Neff	14915400
ACA1_390550	mRNA	ACA1_390550	NW_004457372.1	66883	68465	R	ACA1_390550	complement(join(<66883..67046,67136..67275,67346..67404,67516..67684,67860..68158,68289..>68465))	Acanthamoeba castellanii str. Neff	14915401
ACA1_390570	mRNA	ACA1_390570	NW_004457372.1	72733	75456	R	ACA1_390570	complement(join(<72733..72830,72968..73124,73240..73337,73428..73527,73628..73749,73825..74001,74135..74313,74400..74520,74584..74710,74832..74970,75039..75165,75300..>75456))	Acanthamoeba castellanii str. Neff	14915403
ACA1_390580	mRNA	ACA1_390580	NW_004457372.1	76536	77510	D	ACA1_390580	join(<76536..76581,76679..76812,76997..77110,77325..>77510)	Acanthamoeba castellanii str. Neff	14915365
ACA1_390590	mRNA	ACA1_390590	NW_004457372.1	77721	78365	R	ACA1_390590	complement(<77721..>78365)	Acanthamoeba castellanii str. Neff	14915366
ACA1_390600	mRNA	ACA1_390600	NW_004457372.1	79224	80458	R	ACA1_390600	complement(join(<79224..79341,79610..79750,79864..79999,80083..80184,80278..>80458))	Acanthamoeba castellanii str. Neff	14915367
ACA1_390610	mRNA	ACA1_390610	NW_004457372.1	80687	81221	D	ACA1_390610	join(<80687..80733,80878..81001,81171..>81221)	Acanthamoeba castellanii str. Neff	14915368
ACA1_390630	mRNA	ACA1_390630	NW_004457372.1	82938	85364	D	ACA1_390630	join(<82938..82958,83202..83821,83936..84026,84104..84310,84432..84527,84653..84786,84916..85106,85306..>85364)	Acanthamoeba castellanii str. Neff	14915370
ACA1_390640	mRNA	ACA1_390640	NW_004457372.1	85504	86583	D	ACA1_390640	join(<85504..85650,85781..85979,86065..86249,86332..>86583)	Acanthamoeba castellanii str. Neff	14915371
ACA1_390750	mRNA	ACA1_390750	NW_004457372.1	87142	87760	R	ACA1_390750	complement(join(<87142..87560,87634..>87760))	Acanthamoeba castellanii str. Neff	14915372
ACA1_390760	mRNA	ACA1_390760	NW_004457372.1	87961	89255	R	ACA1_390760	complement(join(<87961..88241,88321..88824,88906..88980,89063..>89255))	Acanthamoeba castellanii str. Neff	14915373
ACA1_390770	mRNA	ACA1_390770	NW_004457372.1	90028	91106	R	ACA1_390770	complement(join(<90028..90065,90239..90337,90424..90555,90657..90705,90771..>91106))	Acanthamoeba castellanii str. Neff	14915374
ACA1_390780	mRNA	ACA1_390780	NW_004457372.1	91167	92633	D	ACA1_390780	join(<91167..91449,91517..91608,91711..91889,92047..92153,92239..92469,92578..>92633)	Acanthamoeba castellanii str. Neff	14915375
ACA1_390790	mRNA	ACA1_390790	NW_004457372.1	92749	94267	R	ACA1_390790	complement(join(<92749..92894,92971..93036,93141..93310,93464..93570,93733..93786,93873..93970,94183..>94267))	Acanthamoeba castellanii str. Neff	14915376
ACA1_390800	mRNA	ACA1_390800	NW_004457372.1	95514	97474	D	ACA1_390800	join(<95514..96032,96282..96525,96604..96719,96792..97028,97112..97209,97291..>97474)	Acanthamoeba castellanii str. Neff	14915377
ACA1_390810	mRNA	ACA1_390810	NW_004457372.1	98261	106520	D	ACA1_390810	join(<98261..98351,98411..98557,98841..98948,99081..99139,99286..99322,99422..99549,99687..99830,99918..100041,100114..100179,100304..100434,100527..100582,100679..100786,100879..100958,101067..101243,101369..101535,101599..101659,101768..101974,102079..102226,102281..102467,102563..102635,102737..102890,102983..103088,103190..103465,103575..103776,103864..104620,104723..105308,105378..105546,105680..105985,106134..106221,106307..>106520)	Acanthamoeba castellanii str. Neff	14915378
ACA1_390820	mRNA	ACA1_390820	NW_004457372.1	107841	109431	D	ACA1_390820	join(<107841..107855,107954..108113,108209..108357,108468..108585,108661..108788,108994..109075,109178..>109431)	Acanthamoeba castellanii str. Neff	14915379
ACA1_390930	mRNA	ACA1_390930	NW_004457372.1	109551	112600	R	ACA1_390930	complement(join(<109551..109687,109770..109904,110022..110175,110248..110408,110474..110639,110742..110913,111001..111116,111256..111384,111484..111775,111847..111995,112080..112189,112289..112422,112497..>112600))	Acanthamoeba castellanii str. Neff	14915380
ACA1_390940	mRNA	ACA1_390940	NW_004457372.1	113980	117354	D	ACA1_390940	join(<113980..114360,114528..114969,115056..115934,116066..116499,116569..>117354)	Acanthamoeba castellanii str. Neff	14915381
ACA1_390950	mRNA	ACA1_390950	NW_004457372.1	117770	119026	D	ACA1_390950	join(<117770..117838,117983..118778,118860..>119026)	Acanthamoeba castellanii str. Neff	14915382
ACA1_390960	mRNA	ACA1_390960	NW_004457372.1	119631	121583	R	ACA1_390960	complement(join(<119631..120978,121141..121241,121497..>121583))	Acanthamoeba castellanii str. Neff	14915383
ACA1_391070	mRNA	ACA1_391070	NW_004457372.1	122399	123510	R	ACA1_391070	complement(join(<122399..122495,122537..122644,122728..122822,122922..122991,123074..123137,123197..123295,123486..>123510))	Acanthamoeba castellanii str. Neff	14915384
ACA1_391080	mRNA	ACA1_391080	NW_004457372.1	123755	124577	D	ACA1_391080	join(<123755..123866,123941..124017,124234..124300,124366..>124577)	Acanthamoeba castellanii str. Neff	14915385
ACA1_391090	mRNA	ACA1_391090	NW_004457372.1	124744	127874	R	ACA1_391090	complement(join(<124744..124827,124955..125082,125156..125264,125371..125527,125615..125695,125780..125943,126195..126266,126371..126541,126698..126852,126963..127079,127232..127408,127529..127692,127759..>127874))	Acanthamoeba castellanii str. Neff	14915386
ACA1_391100	mRNA	ACA1_391100	NW_004457372.1	128362	129056	R	ACA1_391100	complement(join(<128362..128538,128629..128829,129018..>129056))	Acanthamoeba castellanii str. Neff	14915387
ACA1_391120	mRNA	ACA1_391120	NW_004457372.1	130779	131822	R	ACA1_391120	complement(join(<130779..131705,131730..>131822))	Acanthamoeba castellanii str. Neff	14915389
ACA1_391130	mRNA	ACA1_391130	NW_004457372.1	132140	133183	D	ACA1_391130	join(<132140..132201,132364..132576,132624..132699,132734..132761,132858..132994,133088..>133183)	Acanthamoeba castellanii str. Neff	14915390
ACA1_391140	mRNA	ACA1_391140	NW_004457372.1	133208	134829	R	ACA1_391140	complement(join(<133208..134133,134202..134592,134812..>134829))	Acanthamoeba castellanii str. Neff	14915339
ACA1_391150	mRNA	ACA1_391150	NW_004457372.1	134930	137458	R	ACA1_391150	complement(join(<134930..136803,136903..137201,137391..>137458))	Acanthamoeba castellanii str. Neff	14915340
ACA1_391160	mRNA	ACA1_391160	NW_004457372.1	137601	140285	R	ACA1_391160	complement(join(<137601..137842,137924..138043,138134..138256,138342..138672,138740..138843,138934..139274,139388..139505,139560..139710,139731..139847,139944..>140285))	Acanthamoeba castellanii str. Neff	14915341
ACA1_391170	mRNA	ACA1_391170	NW_004457372.1	140678	141523	R	ACA1_391170	complement(join(<140678..140761,140993..>141523))	Acanthamoeba castellanii str. Neff	14915342
ACA1_391180	mRNA	ACA1_391180	NW_004457372.1	141865	144915	D	ACA1_391180	join(<141865..141903,142135..142340,142438..142516,142576..142616,142686..142742,142829..142923,143037..143243,143401..143500,143611..143815,144009..144338,144423..144740,144862..>144915)	Acanthamoeba castellanii str. Neff	14915343
ACA1_391190	mRNA	ACA1_391190	NW_004457372.1	145356	146628	R	ACA1_391190	complement(join(<145356..145613,145717..145803,145898..146012,146120..146256,146362..>146628))	Acanthamoeba castellanii str. Neff	14915344
ACA1_391200	mRNA	ACA1_391200	NW_004457372.1	146722	148243	R	ACA1_391200	complement(join(<146722..146865,146948..147082,147295..147426,147509..147586,147651..147741,147853..148090,148219..>148243))	Acanthamoeba castellanii str. Neff	14915345
ACA1_391210	mRNA	ACA1_391210	NW_004457372.1	148418	150133	R	ACA1_391210	complement(join(<148418..148594,149455..149589,149669..149858,150027..>150133))	Acanthamoeba castellanii str. Neff	14915346
ACA1_391320	mRNA	ACA1_391320	NW_004457372.1	150328	152931	R	ACA1_391320	complement(join(<150328..150738,150895..151036,151228..151361,151453..151619,151780..151894,151981..152052,152121..152255,152370..152440,152523..152671,152803..152865,152876..>152931))	Acanthamoeba castellanii str. Neff	14915347
ACA1_391330	mRNA	ACA1_391330	NW_004457372.1	153237	154475	R	ACA1_391330	complement(join(<153237..153748,153822..153902,154146..154247,154355..>154475))	Acanthamoeba castellanii str. Neff	14915348
ACA1_391340	mRNA	ACA1_391340	NW_004457372.1	154720	156211	D	ACA1_391340	join(<154720..154742,154828..154946,155023..155163,155244..155436,155526..155637,155718..155834,155896..156009,156107..>156211)	Acanthamoeba castellanii str. Neff	14915349
ACA1_391350	mRNA	ACA1_391350	NW_004457372.1	156184	157397	R	ACA1_391350	complement(join(<156184..156225,156422..156507,156654..156692,156753..156811,156895..156955,157073..157156,157277..>157397))	Acanthamoeba castellanii str. Neff	14915350
ACA1_391360	mRNA	ACA1_391360	NW_004457372.1	158159	159780	D	ACA1_391360	join(<158159..158971,159054..159220,159294..>159780)	Acanthamoeba castellanii str. Neff	14915351
ACA1_391370	mRNA	ACA1_391370	NW_004457372.1	159933	160478	D	ACA1_391370	join(<159933..160033,160146..160192,160339..>160478)	Acanthamoeba castellanii str. Neff	14915352
ACA1_391380	mRNA	ACA1_391380	NW_004457372.1	160764	162394	D	ACA1_391380	join(<160764..160794,160872..>162394)	Acanthamoeba castellanii str. Neff	14915323
ACA1_391400	mRNA	ACA1_391400	NW_004457372.1	166112	166889	R	ACA1_391400	complement(join(<166112..166130,166240..166438,166619..>166889))	Acanthamoeba castellanii str. Neff	14915325
ACA1_391420	mRNA	ACA1_391420	NW_004457372.1	168838	170468	D	ACA1_391420	join(<168838..168988,169074..169174,169274..169420,169483..169579,169662..169792,169866..169950,170024..170112,170193..170335,170420..>170468)	Acanthamoeba castellanii str. Neff	14915327
ACA1_391430	mRNA	ACA1_391430	NW_004457372.1	170919	172181	D	ACA1_391430	join(<170919..171661,171767..>172181)	Acanthamoeba castellanii str. Neff	14915328
ACA1_391450	mRNA	ACA1_391450	NW_004457372.1	173424	176760	R	ACA1_391450	complement(join(<173424..173543,173637..173744,173833..174022,174155..174425,174501..174963,175035..175116,175203..175317,175405..175537,175611..175748,175830..176007,176102..176276,176347..176497,176557..>176760))	Acanthamoeba castellanii str. Neff	14915330
ACA1_391460	mRNA	ACA1_391460	NW_004457372.1	177721	181964	D	ACA1_391460	join(<177721..177806,177906..178068,178136..178229,178320..178457,178592..178685,178760..178856,178903..179091,179175..179369,179486..179588,179688..179900,180022..180167,180254..180415,180490..180668,180775..180964,181039..181239,181316..181499,181624..>181964)	Acanthamoeba castellanii str. Neff	14915331
ACA1_391470	mRNA	ACA1_391470	NW_004457372.1	182465	184009	D	ACA1_391470	<182465..>184009	Acanthamoeba castellanii str. Neff	14915332
ACA1_391480	mRNA	ACA1_391480	NW_004457372.1	184492	187250	D	ACA1_391480	join(<184492..184742,184879..184991,185141..185214,185349..185430,185561..185710,185838..185925,186010..186079,186178..186266,186415..186497,186567..186722,186927..187020,187148..>187250)	Acanthamoeba castellanii str. Neff	14915333
ACA1_391490	mRNA	ACA1_391490	NW_004457372.1	188176	189130	R	ACA1_391490	complement(join(<188176..188373,188531..188698,188828..>189130))	Acanthamoeba castellanii str. Neff	14915334
ACA1_391500	mRNA	ACA1_391500	NW_004457372.1	189616	190717	R	ACA1_391500	complement(join(<189616..189702,189825..189965,190082..190411,190511..>190717))	Acanthamoeba castellanii str. Neff	14915335
ACA1_391510	mRNA	ACA1_391510	NW_004457372.1	190770	193287	R	ACA1_391510	complement(join(<190770..191393,191475..191537,191608..191811,191896..192096,192210..192404,192473..192676,192759..192913,193026..193139,193215..>193287))	Acanthamoeba castellanii str. Neff	14915336
ACA1_391520	mRNA	ACA1_391520	NW_004457372.1	193763	195454	D	ACA1_391520	join(<193763..193894,194003..194200,194261..194443,194512..194642,194745..194913,194990..>195454)	Acanthamoeba castellanii str. Neff	14915337
ACA1_391530	mRNA	ACA1_391530	NW_004457372.1	195598	197485	R	ACA1_391530	complement(join(<195598..196626,196721..>197485))	Acanthamoeba castellanii str. Neff	14915338
ACA1_391540	mRNA	ACA1_391540	NW_004457372.1	197957	200480	R	ACA1_391540	complement(join(<197957..198013,198158..198272,198384..198567,198684..198807,198945..199150,199242..199357,199521..199696,199862..199984,200110..200175,200391..>200480))	Acanthamoeba castellanii str. Neff	14915413
ACA1_391550	mRNA	ACA1_391550	NW_004457372.1	200733	202941	D	ACA1_391550	join(<200733..200908,201114..201270,201377..201473,201604..201643,201821..201920,202091..202168,202271..202428,202529..202556,202569..202688,202813..>202941)	Acanthamoeba castellanii str. Neff	14915414
ACA1_391560	mRNA	ACA1_391560	NW_004457372.1	203034	205033	R	ACA1_391560	complement(join(<203034..203283,203372..203550,203671..203886,203983..204144,204268..204475,204571..204732,204858..>205033))	Acanthamoeba castellanii str. Neff	14915415
ACA1_391570	mRNA	ACA1_391570	NW_004457372.1	205081	208406	R	ACA1_391570	complement(join(<205081..205415,205585..205770,205885..206035,206161..206306,206443..206505,206644..206794,206913..207597,207653..207869,207966..208010,208097..>208406))	Acanthamoeba castellanii str. Neff	14915416
ACA1_391580	mRNA	ACA1_391580	NW_004457372.1	208611	211275	R	ACA1_391580	complement(join(<208611..208910,209004..209494,209578..209637,209834..210034,210174..210480,210605..210787,211162..>211275))	Acanthamoeba castellanii str. Neff	14915417
ACA1_391590	mRNA	ACA1_391590	NW_004457372.1	211962	212420	D	ACA1_391590	join(<211962..212100,212206..212292,212320..>212420)	Acanthamoeba castellanii str. Neff	14915418
ACA1_391600	mRNA	ACA1_391600	NW_004457372.1	212831	220235	R	ACA1_391600	complement(join(<212831..213190,213298..213436,213626..213782,213884..214057,214134..214182,214266..214367,214435..214514,214627..214835,214951..215272,215413..215545,215677..216028,216115..216239,216379..216557,216661..216803,216933..217048,217135..217232,217346..217460,217572..217751,217882..218049,218132..218246,218361..218458,218548..218640,218725..218819,218911..218991,219059..219153,219234..219454,219567..219860,219986..220022,220060..220133,220218..>220235))	Acanthamoeba castellanii str. Neff	14915419
ACA1_391610	mRNA	ACA1_391610	NW_004457372.1	220432	223523	D	ACA1_391610	join(<220432..220596,220730..220990,221100..221316,221502..221804,221910..222017,222095..222406,222530..222657,222677..222700,222809..222940,223066..223290,223413..>223523)	Acanthamoeba castellanii str. Neff	14915420
ACA1_391630	mRNA	ACA1_391630	NW_004457372.1	229174	230961	D	ACA1_391630	join(<229174..229397,229493..229844,229926..230081,230182..230385,230508..230568,230651..230758,230822..>230961)	Acanthamoeba castellanii str. Neff	14915422
ACA1_391640	mRNA	ACA1_391640	NW_004457372.1	231049	233066	R	ACA1_391640	complement(join(<231049..231183,231264..231393,231590..231714,231843..231920,232050..232135,232269..232307,232381..232439,232527..232587,232733..232816,232946..>233066))	Acanthamoeba castellanii str. Neff	14915423
ACA1_391650	mRNA	ACA1_391650	NW_004457372.1	233656	234341	R	ACA1_391650	complement(join(<233656..233824,233997..234148,234210..>234341))	Acanthamoeba castellanii str. Neff	14915424
ACA1_391660	mRNA	ACA1_391660	NW_004457372.1	234404	240252	D	ACA1_391660	join(<234404..234488,234562..234677,234784..235429,235595..235800,236458..236592,236688..236847,236965..237086,237186..237276,237368..237462,237585..238203,238308..238507,238648..238794,238899..238982,239104..239230,239371..239504,239587..239678,239790..240122,240225..>240252)	Acanthamoeba castellanii str. Neff	14915425
ACA1_391670	mRNA	ACA1_391670	NW_004457372.1	240496	241045	R	ACA1_391670	complement(join(<240496..240503,240590..240773,240857..>241045))	Acanthamoeba castellanii str. Neff	14915309
ACA1_391680	mRNA	ACA1_391680	NW_004457372.1	241255	244001	R	ACA1_391680	complement(join(<241255..241458,241540..241738,241838..242427,242526..242626,242741..243151,243299..243594,243856..>244001))	Acanthamoeba castellanii str. Neff	14915310
ACA1_391690	mRNA	ACA1_391690	NW_004457372.1	244560	246768	D	ACA1_391690	join(<244560..245110,245223..245352,245426..245492,245595..245704,245837..246133,246148..>246768)	Acanthamoeba castellanii str. Neff	14915311
ACA1_391700	mRNA	ACA1_391700	NW_004457372.1	246890	247360	R	ACA1_391700	complement(<246890..>247360)	Acanthamoeba castellanii str. Neff	14915312
ACA1_391810	mRNA	ACA1_391810	NW_004457372.1	248621	253418	R	ACA1_391810	complement(join(<248621..248628,248962..249136,249214..249297,249323..251266,251322..251337,251358..252613,252753..252775,252927..253103,253223..253347,253414..>253418))	Acanthamoeba castellanii str. Neff	14915313
ACA1_392020	mRNA	ACA1_392020	NW_004457372.1	253651	254545	R	ACA1_392020	complement(join(<253651..253827,253916..254106,254395..>254545))	Acanthamoeba castellanii str. Neff	14915314
ACA1_392130	mRNA	ACA1_392130	NW_004457372.1	254832	257919	R	ACA1_392130	complement(join(<254832..255254,255333..255586,255686..256718,256839..256962,257121..257499,257802..>257919))	Acanthamoeba castellanii str. Neff	14915315
ACA1_392140	mRNA	ACA1_392140	NW_004457372.1	259278	260405	D	ACA1_392140	join(<259278..259478,259588..260036,260120..>260405)	Acanthamoeba castellanii str. Neff	14915316
ACA1_392150	mRNA	ACA1_392150	NW_004457372.1	260549	263160	R	ACA1_392150	complement(join(<260549..260833,261065..261234,261336..261446,261539..261633,261719..261764,261846..261947,262027..262073,262139..262292,262427..262546,262656..262748,262808..262950,263051..>263160))	Acanthamoeba castellanii str. Neff	14915317
ACA1_392160	mRNA	ACA1_392160	NW_004457372.1	263745	264974	R	ACA1_392160	complement(join(<263745..263973,264136..264419,264486..264588,264645..264727,264855..>264974))	Acanthamoeba castellanii str. Neff	14915318
ACA1_392270	mRNA	ACA1_392270	NW_004457372.1	265815	267153	R	ACA1_392270	complement(join(<265815..265886,266130..266259,266335..266409,266487..266569,266637..266972,267046..>267153))	Acanthamoeba castellanii str. Neff	14915319
ACA1_392380	mRNA	ACA1_392380	NW_004457372.1	267379	267711	D	ACA1_392380	<267379..>267711	Acanthamoeba castellanii str. Neff	14915320
ACA1_392390	mRNA	ACA1_392390	NW_004457372.1	268365	270766	D	ACA1_392390	join(<268365..268447,268615..269099,269225..269368,269475..269605,269703..269822,269931..270066,270077..270120,270162..270305,270395..>270766)	Acanthamoeba castellanii str. Neff	14915321
ACA1_392520	mRNA	ACA1_392520	NW_004457372.1	283757	285662	R	ACA1_392520	complement(join(<283757..284038,284134..284175,284261..284330,284449..284540,284637..284840,284943..>285662))	Acanthamoeba castellanii str. Neff	14915354
ACA1_392530	mRNA	ACA1_392530	NW_004457372.1	285866	288811	D	ACA1_392530	join(<285866..285950,286110..286248,286377..287517,287588..287728,287812..288376,288489..>288811)	Acanthamoeba castellanii str. Neff	14915355
ACA1_392540	mRNA	ACA1_392540	NW_004457372.1	288987	289703	R	ACA1_392540	complement(<288987..>289703)	Acanthamoeba castellanii str. Neff	14915356
ACA1_392550	mRNA	ACA1_392550	NW_004457372.1	290121	294243	D	ACA1_392550	join(<290121..290157,290268..290519,290670..290725,290759..291071,291178..291497,291576..291776,291949..292133,292242..292395,292501..292718,292845..292908,293006..293086,293309..293443,293596..293836,293927..>294243)	Acanthamoeba castellanii str. Neff	14915357
ACA1_392560	mRNA	ACA1_392560	NW_004457372.1	294405	296880	R	ACA1_392560	complement(join(<294405..294551,294628..294734,294849..295007,295102..295177,295298..295699,295841..295915,296039..296284,296422..296587,296690..296788,296864..>296880))	Acanthamoeba castellanii str. Neff	14915358
ACA1_392570	mRNA	ACA1_392570	NW_004457372.1	296906	297532	R	ACA1_392570	complement(join(<296906..296957,297046..297087,297207..297232,297304..297370,297453..>297532))	Acanthamoeba castellanii str. Neff	14915359
ACA1_392580	mRNA	ACA1_392580	NW_004457372.1	297827	298901	D	ACA1_392580	join(<297827..297887,297983..298060,298160..298362,298492..298585,298678..>298901)	Acanthamoeba castellanii str. Neff	14915360
ACA1_392590	mRNA	ACA1_392590	NW_004457372.1	299448	300158	R	ACA1_392590	complement(<299448..>300158)	Acanthamoeba castellanii str. Neff	14915361
ACA1_337440	mRNA	ACA1_337440	NW_004457371.1	1204	1718	R	ACA1_337440	complement(join(<1204..1214,1259..>1718))	Acanthamoeba castellanii str. Neff	14915303
ACA1_337550	mRNA	ACA1_337550	NW_004457371.1	4822	5076	D	ACA1_337550	join(<4822..4903,4955..>5076)	Acanthamoeba castellanii str. Neff	14915304
ACA1_337560	mRNA	ACA1_337560	NW_004457371.1	6353	8708	R	ACA1_337560	complement(join(<6353..6361,6379..8057,8184..8508,8637..>8708))	Acanthamoeba castellanii str. Neff	14915305
ACA1_337580	mRNA	ACA1_337580	NW_004457371.1	12085	12297	D	ACA1_337580	<12085..>12297	Acanthamoeba castellanii str. Neff	14915307
ACA1_337590	mRNA	ACA1_337590	NW_004457371.1	12465	13424	R	ACA1_337590	complement(<12465..>13424)	Acanthamoeba castellanii str. Neff	14915308
ACA1_337600	mRNA	ACA1_337600	NW_004457371.1	14882	15325	D	ACA1_337600	<14882..>15325	Acanthamoeba castellanii str. Neff	14915298
ACA1_337610	mRNA	ACA1_337610	NW_004457371.1	16133	16886	D	ACA1_337610	join(<16133..16458,16487..16633,16724..16780,16856..>16886)	Acanthamoeba castellanii str. Neff	14915299
ACA1_337620	mRNA	ACA1_337620	NW_004457371.1	17191	18433	R	ACA1_337620	complement(join(<17191..17202,17276..17283,17364..17451,17519..>18433))	Acanthamoeba castellanii str. Neff	14915300
ACA1_337630	mRNA	ACA1_337630	NW_004457371.1	18673	19284	D	ACA1_337630	join(<18673..18918,18964..>19284)	Acanthamoeba castellanii str. Neff	14915301
ACA1_337640	mRNA	ACA1_337640	NW_004457371.1	20186	20844	R	ACA1_337640	complement(join(<20186..20257,20378..20502,20823..>20844))	Acanthamoeba castellanii str. Neff	14915302
ACA1_022180	mRNA	ACA1_022180	NW_004457370.1	228	816	D	ACA1_022180	join(<228..726,791..>816)	Acanthamoeba castellanii str. Neff	14915289
ACA1_022190	mRNA	ACA1_022190	NW_004457370.1	957	1266	R	ACA1_022190	complement(join(<957..1135,1197..>1266))	Acanthamoeba castellanii str. Neff	14915290
ACA1_022200	mRNA	ACA1_022200	NW_004457370.1	2107	2538	D	ACA1_022200	join(<2107..2379,2512..>2538)	Acanthamoeba castellanii str. Neff	14915297
ACA1_022210	mRNA	ACA1_022210	NW_004457370.1	2722	3375	D	ACA1_022210	join(<2722..3261,3307..>3375)	Acanthamoeba castellanii str. Neff	14915291
ACA1_022220	mRNA	ACA1_022220	NW_004457370.1	4291	6778	R	ACA1_022220	complement(join(<4291..4707,4803..4964,5065..5227,5477..5573,5675..5782,5884..6058,6145..6255,6494..>6778))	Acanthamoeba castellanii str. Neff	14915292
ACA1_022330	mRNA	ACA1_022330	NW_004457370.1	7425	10997	D	ACA1_022330	join(<7425..7475,7562..7714,7831..7918,8040..8196,8286..8329,8442..8514,8604..8675,8789..8864,8938..9156,9253..9476,9583..9721,9811..10046,10138..10365,10480..10708,10830..>10997)	Acanthamoeba castellanii str. Neff	14915293
ACA1_022340	mRNA	ACA1_022340	NW_004457370.1	11102	11662	R	ACA1_022340	complement(join(<11102..11267,11369..11504,11575..>11662))	Acanthamoeba castellanii str. Neff	14915294
ACA1_022350	mRNA	ACA1_022350	NW_004457370.1	12066	12564	R	ACA1_022350	complement(join(<12066..12430,12495..>12564))	Acanthamoeba castellanii str. Neff	14915295
ACA1_022360	mRNA	ACA1_022360	NW_004457370.1	12848	18985	R	ACA1_022360	complement(join(<12848..13009,13071..13361,13509..13595,13692..13929,14001..14171,14291..14394,14483..14730,14810..15002,15079..15140,15229..15463,15587..15661,15738..15983,16072..16235,16400..16496,16662..16832,18224..18382,18510..18677,18767..>18985))	Acanthamoeba castellanii str. Neff	14915296
ACA1_124690	mRNA	ACA1_124690	NW_004457369.1	146	650	D	ACA1_124690	join(<146..192,353..459,574..>650)	Acanthamoeba castellanii str. Neff	14915255
ACA1_124800	mRNA	ACA1_124800	NW_004457369.1	6986	8791	D	ACA1_124800	join(<6986..7206,7528..7681,7736..8435,8622..>8791)	Acanthamoeba castellanii str. Neff	14915257
ACA1_124810	mRNA	ACA1_124810	NW_004457369.1	9349	10283	D	ACA1_124810	join(<9349..9758,10034..>10283)	Acanthamoeba castellanii str. Neff	14915256
ACA1_124920	mRNA	ACA1_124920	NW_004457369.1	12537	14576	R	ACA1_124920	complement(join(<12537..12752,12829..12892,13002..13711,13733..14423,14547..>14576))	Acanthamoeba castellanii str. Neff	14915278
ACA1_124930	mRNA	ACA1_124930	NW_004457369.1	14994	17338	R	ACA1_124930	complement(join(<14994..15085,15159..15299,15453..16230,16307..>17338))	Acanthamoeba castellanii str. Neff	14915279
ACA1_125040	mRNA	ACA1_125040	NW_004457369.1	21604	22226	R	ACA1_125040	complement(join(<21604..21684,21815..21879,21938..>22226))	Acanthamoeba castellanii str. Neff	14915280
ACA1_125050	mRNA	ACA1_125050	NW_004457369.1	22469	22669	D	ACA1_125050	<22469..>22669	Acanthamoeba castellanii str. Neff	14915281
ACA1_125060	mRNA	ACA1_125060	NW_004457369.1	22960	24046	D	ACA1_125060	join(<22960..23163,23363..23440,23485..23664,23732..>24046)	Acanthamoeba castellanii str. Neff	14915282
ACA1_125070	mRNA	ACA1_125070	NW_004457369.1	24102	24523	R	ACA1_125070	complement(join(<24102..24161,24244..24357,24419..>24523))	Acanthamoeba castellanii str. Neff	14915283
ACA1_125080	mRNA	ACA1_125080	NW_004457369.1	25100	27382	D	ACA1_125080	join(<25100..25686,25756..>27382)	Acanthamoeba castellanii str. Neff	14915284
ACA1_125090	mRNA	ACA1_125090	NW_004457369.1	28011	29843	D	ACA1_125090	<28011..>29843	Acanthamoeba castellanii str. Neff	14915285
ACA1_125100	mRNA	ACA1_125100	NW_004457369.1	30030	31338	R	ACA1_125100	complement(join(<30030..30240,30323..30393,30480..30624,30691..30812,30929..30993,31062..31212,31291..>31338))	Acanthamoeba castellanii str. Neff	14915286
ACA1_125110	mRNA	ACA1_125110	NW_004457369.1	31575	32822	R	ACA1_125110	complement(join(<31575..31662,31714..32113,32282..>32822))	Acanthamoeba castellanii str. Neff	14915287
ACA1_125120	mRNA	ACA1_125120	NW_004457369.1	33388	34525	R	ACA1_125120	complement(join(<33388..33563,33646..33696,33775..33870,33970..>34525))	Acanthamoeba castellanii str. Neff	14915288
ACA1_125130	mRNA	ACA1_125130	NW_004457369.1	34887	36597	D	ACA1_125130	join(<34887..35016,35095..35245,35376..35436,35541..35605,35713..35803,35881..36000,36076..36219,36253..36339,36427..>36597)	Acanthamoeba castellanii str. Neff	14915258
ACA1_125150	mRNA	ACA1_125150	NW_004457369.1	39101	40932	R	ACA1_125150	complement(join(<39101..39422,39515..39684,39865..39950,40052..40135,40222..40294,40441..40613,40693..40750,40864..>40932))	Acanthamoeba castellanii str. Neff	14915260
ACA1_125160	mRNA	ACA1_125160	NW_004457369.1	41211	43068	R	ACA1_125160	complement(join(<41211..41673,41809..42073,42205..42325,42453..42526,42597..42690,42777..42855,42968..>43068))	Acanthamoeba castellanii str. Neff	14915261
ACA1_125170	mRNA	ACA1_125170	NW_004457369.1	43888	45561	R	ACA1_125170	complement(join(<43888..44109,44193..44334,44447..44538,44639..44756,44856..44943,45176..45391,45474..>45561))	Acanthamoeba castellanii str. Neff	14915262
ACA1_125280	mRNA	ACA1_125280	NW_004457369.1	47103	47780	D	ACA1_125280	join(<47103..47331,47476..>47780)	Acanthamoeba castellanii str. Neff	14915263
ACA1_125390	mRNA	ACA1_125390	NW_004457369.1	50475	51141	D	ACA1_125390	join(<50475..50691,50837..>51141)	Acanthamoeba castellanii str. Neff	14915264
ACA1_125410	mRNA	ACA1_125410	NW_004457369.1	55500	55946	D	ACA1_125410	join(<55500..55632,55693..55803,55876..>55946)	Acanthamoeba castellanii str. Neff	14915266
ACA1_125420	mRNA	ACA1_125420	NW_004457369.1	56215	57160	R	ACA1_125420	complement(join(<56215..56598,56622..56832,56919..>57160))	Acanthamoeba castellanii str. Neff	14915267
ACA1_125530	mRNA	ACA1_125530	NW_004457369.1	57675	58074	R	ACA1_125530	complement(join(<57675..57791,57943..>58074))	Acanthamoeba castellanii str. Neff	14915268
ACA1_125540	mRNA	ACA1_125540	NW_004457369.1	58487	60957	D	ACA1_125540	join(<58487..58549,58612..58721,58858..58957,59108..59192,59274..59399,59643..59796,59903..60086,60162..60275,60342..60419,60509..60554,60639..60750,60831..>60957)	Acanthamoeba castellanii str. Neff	14915269
ACA1_125550	mRNA	ACA1_125550	NW_004457369.1	61064	66586	R	ACA1_125550	complement(join(<61064..61246,61612..61728,61856..62084,62167..62577,62651..63222,63316..63551,63637..63757,63835..63908,64034..64169,64257..64366,64451..64668,64766..64898,65005..65078,65206..65285,65394..65505,65600..65667,65777..65917,65999..66115,66299..>66586))	Acanthamoeba castellanii str. Neff	14915270
ACA1_125560	mRNA	ACA1_125560	NW_004457369.1	66913	67314	R	ACA1_125560	complement(<66913..>67314)	Acanthamoeba castellanii str. Neff	14915271
ACA1_125570	mRNA	ACA1_125570	NW_004457369.1	67440	69001	R	ACA1_125570	complement(join(<67440..67585,67815..67890,67976..68122,68167..68368,68505..68725,68846..>69001))	Acanthamoeba castellanii str. Neff	14915272
ACA1_125680	mRNA	ACA1_125680	NW_004457369.1	70096	70526	R	ACA1_125680	complement(join(<70096..70171,70237..70386,70456..>70526))	Acanthamoeba castellanii str. Neff	14915273
ACA1_125790	mRNA	ACA1_125790	NW_004457369.1	73003	73517	R	ACA1_125790	complement(join(<73003..73086,73180..73280,73355..>73517))	Acanthamoeba castellanii str. Neff	14915274
ACA1_125800	mRNA	ACA1_125800	NW_004457369.1	74181	75796	D	ACA1_125800	join(<74181..74432,74506..74822,74936..75069,75153..75325,75461..75532,75641..>75796)	Acanthamoeba castellanii str. Neff	14915275
ACA1_125810	mRNA	ACA1_125810	NW_004457369.1	76036	78156	R	ACA1_125810	complement(join(<76036..76188,76285..76437,76515..76598,76681..76769,76850..76983,77065..77182,77262..77469,77545..77652,77764..77946,78040..>78156))	Acanthamoeba castellanii str. Neff	14915276
ACA1_125820	mRNA	ACA1_125820	NW_004457369.1	79424	81951	D	ACA1_125820	join(<79424..79677,79740..79780,79879..79965,80058..80215,80291..80438,80513..80587,80665..80864,80954..81049,81125..81278,81356..81489,81558..81644,81741..81788,81859..>81951)	Acanthamoeba castellanii str. Neff	14915277
ACA1_125830	mRNA	ACA1_125830	NW_004457369.1	82659	83254	D	ACA1_125830	join(<82659..82818,82980..>83254)	Acanthamoeba castellanii str. Neff	14915254
ACA1_066410	mRNA	ACA1_066410	NW_004457368.1	90	491	R	ACA1_066410	complement(<90..>491)	Acanthamoeba castellanii str. Neff	14915243
ACA1_066420	mRNA	ACA1_066420	NW_004457368.1	666	1347	D	ACA1_066420	join(<666..1002,1073..>1347)	Acanthamoeba castellanii str. Neff	14915225
ACA1_066530	mRNA	ACA1_066530	NW_004457368.1	6222	6854	R	ACA1_066530	complement(join(<6222..6290,6357..6667,6731..>6854))	Acanthamoeba castellanii str. Neff	14915226
ACA1_066550	mRNA	ACA1_066550	NW_004457368.1	11238	11700	R	ACA1_066550	complement(join(<11238..11425,11480..11614,11673..>11700))	Acanthamoeba castellanii str. Neff	14915228
ACA1_066570	mRNA	ACA1_066570	NW_004457368.1	12293	12874	D	ACA1_066570	join(<12293..12585,12754..>12874)	Acanthamoeba castellanii str. Neff	14915230
ACA1_066580	mRNA	ACA1_066580	NW_004457368.1	13001	20950	D	ACA1_066580	join(<13001..13031,13049..13157,13223..13953,14042..14220,14304..14410,14500..14896,14977..15522,15613..15811,15874..16007,16088..16160,16233..16881,16958..17792,17862..18194,18287..18347,18439..18563,18634..19891,19968..20247,20306..20483,20585..20670,20836..>20950)	Acanthamoeba castellanii str. Neff	14915231
ACA1_066590	mRNA	ACA1_066590	NW_004457368.1	21335	21949	D	ACA1_066590	<21335..>21949	Acanthamoeba castellanii str. Neff	14915232
ACA1_066600	mRNA	ACA1_066600	NW_004457368.1	22152	27467	R	ACA1_066600	complement(join(<22152..22500,22627..22705,22823..22938,23020..23175,23246..23401,23468..23818,23837..23959,24060..24361,24488..24602,24680..24720,24799..24872,24964..25069,25154..25258,25323..25427,25503..25598,25724..25826,25916..26067,26144..26215,26287..26404,26512..27007,27344..>27467))	Acanthamoeba castellanii str. Neff	14915233
ACA1_066610	mRNA	ACA1_066610	NW_004457368.1	27668	31670	D	ACA1_066610	join(<27668..27784,27859..28066,28155..28244,28322..28506,28572..28706,28860..28965,29278..29462,29528..29662,29881..29986,30060..30127,30230..30334,30437..30601,30671..30739,30817..31042,31072..>31670)	Acanthamoeba castellanii str. Neff	14915234
ACA1_066720	mRNA	ACA1_066720	NW_004457368.1	31824	35234	D	ACA1_066720	join(<31824..32487,32559..32693,32818..32934,33015..33282,33356..33494,33577..34093,34173..34634,34719..35088,35123..>35234)	Acanthamoeba castellanii str. Neff	14915235
ACA1_066730	mRNA	ACA1_066730	NW_004457368.1	35545	36363	R	ACA1_066730	complement(join(<35545..35657,35747..35882,35996..36124,36226..>36363))	Acanthamoeba castellanii str. Neff	14915236
ACA1_066740	mRNA	ACA1_066740	NW_004457368.1	36479	37758	D	ACA1_066740	join(<36479..36848,36957..37094,37171..37217,37297..37368,37427..37526,37607..>37758)	Acanthamoeba castellanii str. Neff	14915237
ACA1_066750	mRNA	ACA1_066750	NW_004457368.1	37917	39409	R	ACA1_066750	complement(join(<37917..38209,38313..38578,38662..38829,39015..39246,39346..>39409))	Acanthamoeba castellanii str. Neff	14915238
ACA1_066760	mRNA	ACA1_066760	NW_004457368.1	39614	40819	R	ACA1_066760	complement(join(<39614..40373,40452..>40819))	Acanthamoeba castellanii str. Neff	14915239
ACA1_066770	mRNA	ACA1_066770	NW_004457368.1	41290	42386	R	ACA1_066770	complement(join(<41290..41426,41530..41804,41874..42164,42227..42276,42357..>42386))	Acanthamoeba castellanii str. Neff	14915240
ACA1_066780	mRNA	ACA1_066780	NW_004457368.1	42617	43339	R	ACA1_066780	complement(join(<42617..42775,42811..42849,42945..43017,43086..43110,43195..>43339))	Acanthamoeba castellanii str. Neff	14915241
ACA1_066790	mRNA	ACA1_066790	NW_004457368.1	43427	44364	R	ACA1_066790	complement(join(<43427..43554,43618..43718,43794..43945,44012..44154,44229..>44364))	Acanthamoeba castellanii str. Neff	14915242
ACA1_066800	mRNA	ACA1_066800	NW_004457368.1	44384	44795	R	ACA1_066800	complement(join(<44384..44571,44645..>44795))	Acanthamoeba castellanii str. Neff	14915244
ACA1_066810	mRNA	ACA1_066810	NW_004457368.1	45079	50552	D	ACA1_066810	join(<45079..46114,46239..46438,46533..46703,46801..46932,47011..47139,47228..47320,47459..47643,47711..47827,47962..48067,48157..48400,48469..48563,48662..48785,48892..49080,49195..49285,49384..49486,49578..49675,49796..>50552)	Acanthamoeba castellanii str. Neff	14915245
ACA1_066820	mRNA	ACA1_066820	NW_004457368.1	51820	52773	R	ACA1_066820	complement(join(<51820..52388,52455..>52773))	Acanthamoeba castellanii str. Neff	14915246
ACA1_066830	mRNA	ACA1_066830	NW_004457368.1	53270	53887	R	ACA1_066830	complement(<53270..>53887)	Acanthamoeba castellanii str. Neff	14915247
ACA1_066840	mRNA	ACA1_066840	NW_004457368.1	54518	59122	R	ACA1_066840	complement(join(<54518..55073,55152..55442,55528..55628,55704..56122,56216..56726,56809..56985,57069..57278,57368..57499,57589..57673,57759..57886,57977..58207,58268..58324,58397..>59122))	Acanthamoeba castellanii str. Neff	14915248
ACA1_066850	mRNA	ACA1_066850	NW_004457368.1	60549	64338	D	ACA1_066850	join(<60549..60677,60751..60933,61026..61333,61444..61595,61689..61816,61905..62025,62110..62228,62321..62459,62526..62947,62978..63068,63166..63263,63358..63575,63647..63725,63840..63953,64066..64149,64174..>64338)	Acanthamoeba castellanii str. Neff	14915249
ACA1_066860	mRNA	ACA1_066860	NW_004457368.1	64423	65582	R	ACA1_066860	complement(join(<64423..64573,64669..64754,64836..64991,65091..65266,65366..65459,65505..>65582))	Acanthamoeba castellanii str. Neff	14915250
ACA1_066870	mRNA	ACA1_066870	NW_004457368.1	65732	68499	R	ACA1_066870	complement(join(<65732..66016,66123..66191,66278..66450,66534..66624,66758..66841,66936..67042,67113..67221,67436..67590,67693..67824,67937..68121,68204..>68499))	Acanthamoeba castellanii str. Neff	14915251
ACA1_066880	mRNA	ACA1_066880	NW_004457368.1	68907	70255	D	ACA1_066880	join(<68907..68953,69088..69410,69608..69846,69894..69990,70101..>70255)	Acanthamoeba castellanii str. Neff	14915252
ACA1_066890	mRNA	ACA1_066890	NW_004457368.1	70743	74024	D	ACA1_066890	join(<70743..71023,71322..71459,71495..71578,71756..71808,71847..72182,72440..72516,72961..73038,73149..73192,73269..73394,73490..73625,73754..73871,73948..>74024)	Acanthamoeba castellanii str. Neff	14915253
ACA1_066900	mRNA	ACA1_066900	NW_004457368.1	74658	75465	D	ACA1_066900	<74658..>75465	Acanthamoeba castellanii str. Neff	14915217
ACA1_066910	mRNA	ACA1_066910	NW_004457368.1	78300	81237	D	ACA1_066910	join(<78300..78392,78475..78562,78629..78792,78916..79167,79259..79355,79455..79561,79665..79870,79953..80122,80187..80386,80574..80690,80782..80910,81001..>81237)	Acanthamoeba castellanii str. Neff	14915218
ACA1_066920	mRNA	ACA1_066920	NW_004457368.1	81277	84197	D	ACA1_066920	join(<81277..81371,81496..81824,81919..82228,82322..82439,82537..82616,82699..82871,82958..83127,83205..83345,83419..83470,83543..83597,83663..83833,83935..84025,84126..>84197)	Acanthamoeba castellanii str. Neff	14915219
ACA1_066930	mRNA	ACA1_066930	NW_004457368.1	84526	87787	D	ACA1_066930	join(<84526..84684,84927..84985,85128..85217,85312..85435,85537..85666,85751..86020,86149..86535,86659..86815,86891..87142,87250..87412,87531..87606,87675..>87787)	Acanthamoeba castellanii str. Neff	14915220
ACA1_066940	mRNA	ACA1_066940	NW_004457368.1	88900	89763	R	ACA1_066940	complement(join(<88900..89112,89281..89365,89440..89522,89650..>89763))	Acanthamoeba castellanii str. Neff	14915221
ACA1_066950	mRNA	ACA1_066950	NW_004457368.1	92723	93040	D	ACA1_066950	<92723..>93040	Acanthamoeba castellanii str. Neff	14915222
ACA1_066960	mRNA	ACA1_066960	NW_004457368.1	93421	95090	D	ACA1_066960	join(<93421..93753,93823..93905,94060..94311,94362..94660,94861..>95090)	Acanthamoeba castellanii str. Neff	14915223
ACA1_067070	mRNA	ACA1_067070	NW_004457368.1	101333	101730	R	ACA1_067070	complement(join(<101333..101480,101621..>101730))	Acanthamoeba castellanii str. Neff	14915224
ACA1_271250	mRNA	ACA1_271250	NW_004457367.1	3177	5778	R	ACA1_271250	complement(join(<3177..3371,3502..3575,3711..3827,3931..4039,4107..4931,5095..5204,5420..5539,5724..>5778))	Acanthamoeba castellanii str. Neff	14915197
ACA1_271260	mRNA	ACA1_271260	NW_004457367.1	5956	6666	R	ACA1_271260	complement(join(<5956..6029,6149..6179,6364..>6666))	Acanthamoeba castellanii str. Neff	14915196
ACA1_271270	mRNA	ACA1_271270	NW_004457367.1	7289	8882	D	ACA1_271270	join(<7289..7622,7683..7921,7994..8245,8342..8495,8638..>8882)	Acanthamoeba castellanii str. Neff	14915185
ACA1_271280	mRNA	ACA1_271280	NW_004457367.1	9202	11459	R	ACA1_271280	complement(join(<9202..9322,9407..9474,9582..9690,9824..9891,10035..10154,10267..10378,10486..10652,10802..10868,11012..11101,11285..11334,11424..>11459))	Acanthamoeba castellanii str. Neff	14915186
ACA1_271290	mRNA	ACA1_271290	NW_004457367.1	11643	12880	R	ACA1_271290	complement(join(<11643..11827,11964..12075,12197..12268,12393..12486,12592..12743,12809..>12880))	Acanthamoeba castellanii str. Neff	14915187
ACA1_271300	mRNA	ACA1_271300	NW_004457367.1	13110	14129	D	ACA1_271300	join(<13110..13437,13527..13756,13839..>14129)	Acanthamoeba castellanii str. Neff	14915188
ACA1_271310	mRNA	ACA1_271310	NW_004457367.1	14302	17962	D	ACA1_271310	join(<14302..14364,14472..14559,14717..15969,16090..16161,16226..16328,16400..16567,16777..16826,16971..17027,17203..17277,17456..17521,17723..17801,17820..>17962)	Acanthamoeba castellanii str. Neff	14915189
ACA1_271320	mRNA	ACA1_271320	NW_004457367.1	18229	20281	R	ACA1_271320	complement(join(<18229..18332,18482..19635,19953..>20281))	Acanthamoeba castellanii str. Neff	14915190
ACA1_271330	mRNA	ACA1_271330	NW_004457367.1	20827	22426	D	ACA1_271330	join(<20827..20879,20961..21073,21212..21289,21465..21570,21664..21754,21935..>22426)	Acanthamoeba castellanii str. Neff	14915191
ACA1_271340	mRNA	ACA1_271340	NW_004457367.1	22563	23833	R	ACA1_271340	complement(join(<22563..23167,23446..23578,23648..>23833))	Acanthamoeba castellanii str. Neff	14915192
ACA1_271350	mRNA	ACA1_271350	NW_004457367.1	24186	26587	D	ACA1_271350	join(<24186..24352,24720..24780,25012..25069,25208..25315,25546..25599,25708..25811,25960..26041,26168..26265,26465..>26587)	Acanthamoeba castellanii str. Neff	14915193
ACA1_271360	mRNA	ACA1_271360	NW_004457367.1	32299	32726	D	ACA1_271360	join(<32299..32387,32459..>32726)	Acanthamoeba castellanii str. Neff	14915194
ACA1_271370	mRNA	ACA1_271370	NW_004457367.1	33027	37670	D	ACA1_271370	join(<33027..33725,33933..34085,34168..34198,34366..34441,34668..34749,34970..35125,35348..35470,35640..35699,35797..35988,36151..36281,36465..36630,36753..36802,37035..37477,37570..>37670)	Acanthamoeba castellanii str. Neff	14915195
ACA1_271380	mRNA	ACA1_271380	NW_004457367.1	37929	39034	D	ACA1_271380	join(<37929..38105,38222..>39034)	Acanthamoeba castellanii str. Neff	14915208
ACA1_271390	mRNA	ACA1_271390	NW_004457367.1	39204	40173	R	ACA1_271390	complement(join(<39204..39413,39586..39723,39820..>40173))	Acanthamoeba castellanii str. Neff	14915209
ACA1_271500	mRNA	ACA1_271500	NW_004457367.1	43127	48064	D	ACA1_271500	join(<43127..43397,43552..43937,44133..44396,44585..44731,44892..45198,45366..45719,45771..46015,46152..46341,46526..46709,46788..46888,46992..47183,47301..47469,47608..>48064)	Acanthamoeba castellanii str. Neff	14915210
ACA1_271510	mRNA	ACA1_271510	NW_004457367.1	54428	55113	D	ACA1_271510	join(<54428..54453,54897..>55113)	Acanthamoeba castellanii str. Neff	14915211
ACA1_271520	mRNA	ACA1_271520	NW_004457367.1	56529	61805	D	ACA1_271520	join(<56529..56822,57003..57173,57400..57510,57679..57799,57934..58022,58205..58526,58666..58838,59009..59083,59190..59273,59448..59576,59813..59950,60171..60296,60339..60626,60774..60901,61049..61139,61298..61363,61466..61522,61689..>61805)	Acanthamoeba castellanii str. Neff	14915212
ACA1_271530	mRNA	ACA1_271530	NW_004457367.1	62127	62929	R	ACA1_271530	complement(join(<62127..62169,62304..62388,62509..>62929))	Acanthamoeba castellanii str. Neff	14915213
ACA1_271540	mRNA	ACA1_271540	NW_004457367.1	63479	70572	D	ACA1_271540	join(<63479..63601,63647..64133,64352..64485,64661..65146,65336..65456,65544..65620,65726..65835,65959..66094,66245..66389,66507..66592,66736..66798,66945..67038,67111..67198,67462..67616,67638..67715,67872..68001,68115..68186,68351..68461,68644..68783,68919..68996,69231..69336,69436..69562,69654..69791,70037..70187,70259..>70572)	Acanthamoeba castellanii str. Neff	14915214
ACA1_271550	mRNA	ACA1_271550	NW_004457367.1	70735	72175	R	ACA1_271550	complement(join(<70735..71426,71513..71694,71772..>72175))	Acanthamoeba castellanii str. Neff	14915215
ACA1_271560	mRNA	ACA1_271560	NW_004457367.1	72627	74689	R	ACA1_271560	complement(join(<72627..72722,72797..>74689))	Acanthamoeba castellanii str. Neff	14915216
ACA1_271570	mRNA	ACA1_271570	NW_004457367.1	75382	77481	R	ACA1_271570	complement(join(<75382..75525,75628..75822,75933..76158,76245..76394,76561..76882,77043..>77481))	Acanthamoeba castellanii str. Neff	14915198
ACA1_271580	mRNA	ACA1_271580	NW_004457367.1	77575	79460	R	ACA1_271580	complement(join(<77575..77631,77735..77788,77947..78138,78208..78249,78354..78428,78552..78607,78652..78674,78703..78819,78921..79048,79158..79223,79326..>79460))	Acanthamoeba castellanii str. Neff	14915199
ACA1_271590	mRNA	ACA1_271590	NW_004457367.1	79574	81232	D	ACA1_271590	join(<79574..79788,79902..80034,80312..80389,80517..80584,80696..80931,81018..>81232)	Acanthamoeba castellanii str. Neff	14915200
ACA1_271600	mRNA	ACA1_271600	NW_004457367.1	81386	83947	R	ACA1_271600	complement(join(<81386..81521,81610..81682,81800..81891,81998..82110,82259..82347,82457..82531,82619..82726,82850..82896,82931..83086,83216..83307,83426..83581,83861..>83947))	Acanthamoeba castellanii str. Neff	14915201
ACA1_271720	mRNA	ACA1_271720	NW_004457367.1	88899	93587	R	ACA1_271720	complement(join(<88899..88961,89058..89219,89316..89622,89736..89923,90024..90329,90435..90536,90774..90829,90945..91062,91171..91233,91312..91393,91447..91574,91678..91857,91979..92201,92269..92324,92406..92521,92595..92700,92811..92915,93032..93106,93137..93271,93301..93435,93558..>93587))	Acanthamoeba castellanii str. Neff	14915203
ACA1_271730	mRNA	ACA1_271730	NW_004457367.1	94195	95271	R	ACA1_271730	complement(join(<94195..94324,94477..94546,94641..94709,94883..94949,95088..95160,95246..>95271))	Acanthamoeba castellanii str. Neff	14915204
ACA1_271740	mRNA	ACA1_271740	NW_004457367.1	95871	98756	D	ACA1_271740	join(<95871..96036,96354..97091,97227..97390,97527..97842,97898..98106,98224..98399,98486..>98756)	Acanthamoeba castellanii str. Neff	14915205
ACA1_271750	mRNA	ACA1_271750	NW_004457367.1	99663	101489	R	ACA1_271750	complement(join(<99663..99784,99880..99981,100061..100186,100285..100342,100417..100515,100625..100680,100770..100862,100967..101040,101284..>101489))	Acanthamoeba castellanii str. Neff	14915206
ACA1_271860	mRNA	ACA1_271860	NW_004457367.1	101834	104084	D	ACA1_271860	join(<101834..101997,102159..102333,102478..102561,102676..102771,102905..103075,103208..103405,103544..103651,103732..103803,103906..103967,104072..>104084)	Acanthamoeba castellanii str. Neff	14915207
ACA1_320940	mRNA	ACA1_320940	NW_004457366.1	125	550	D	ACA1_320940	<125..>550	Acanthamoeba castellanii str. Neff	14915182
ACA1_320950	mRNA	ACA1_320950	NW_004457366.1	597	1665	R	ACA1_320950	complement(join(<597..756,847..978,1052..1169,1254..1331,1407..>1665))	Acanthamoeba castellanii str. Neff	14915183
ACA1_320960	mRNA	ACA1_320960	NW_004457366.1	2563	4754	R	ACA1_320960	complement(join(<2563..2714,2796..2936,3047..3182,3263..3470,3562..3660,3727..3829,3904..3975,4053..4161,4224..4289,4361..4467,4634..>4754))	Acanthamoeba castellanii str. Neff	14915184
ACA1_320970	mRNA	ACA1_320970	NW_004457366.1	5089	5415	R	ACA1_320970	complement(<5089..>5415)	Acanthamoeba castellanii str. Neff	14915173
ACA1_320980	mRNA	ACA1_320980	NW_004457366.1	5827	9928	D	ACA1_320980	join(<5827..5973,6031..6131,6281..6408,6479..6710,6789..6919,7015..7160,7261..7328,7437..7540,7625..8020,8147..8350,8442..8714,8785..8878,8977..9776,9858..>9928)	Acanthamoeba castellanii str. Neff	14915174
ACA1_320990	mRNA	ACA1_320990	NW_004457366.1	10087	11354	R	ACA1_320990	complement(join(<10087..10388,10511..>11354))	Acanthamoeba castellanii str. Neff	14915175
ACA1_321000	mRNA	ACA1_321000	NW_004457366.1	11938	13176	D	ACA1_321000	join(<11938..12082,12187..12351,12457..12609,12711..12866,12983..>13176)	Acanthamoeba castellanii str. Neff	14915176
ACA1_321010	mRNA	ACA1_321010	NW_004457366.1	13242	16037	D	ACA1_321010	join(<13242..13377,13470..13612,13771..14061,14149..14298,14394..14709,14796..14896,14948..15019,15090..15351,15426..15625,15698..15887,15964..>16037)	Acanthamoeba castellanii str. Neff	14915177
ACA1_321020	mRNA	ACA1_321020	NW_004457366.1	17283	19223	D	ACA1_321020	join(<17283..17297,17403..18042,18113..18247,18349..>19223)	Acanthamoeba castellanii str. Neff	14915178
ACA1_321030	mRNA	ACA1_321030	NW_004457366.1	20934	23145	R	ACA1_321030	complement(join(<20934..21467,21761..21835,21981..22378,22464..22563,22653..22889,22990..>23145))	Acanthamoeba castellanii str. Neff	14915179
ACA1_321040	mRNA	ACA1_321040	NW_004457366.1	23794	26927	D	ACA1_321040	join(<23794..24055,24135..24142,24155..24629,24707..24842,24926..25097,25184..25341,25426..25661,25769..26549,26639..26731,26819..>26927)	Acanthamoeba castellanii str. Neff	14915180
ACA1_321050	mRNA	ACA1_321050	NW_004457366.1	27138	27770	R	ACA1_321050	complement(join(<27138..27422,27468..>27770))	Acanthamoeba castellanii str. Neff	14915181
ACA1_321060	mRNA	ACA1_321060	NW_004457366.1	28057	31530	R	ACA1_321060	complement(join(<28057..28119,28197..30853,31236..31332,31426..>31530))	Acanthamoeba castellanii str. Neff	14915172
ACA1_077740	mRNA	ACA1_077740	NW_004457365.1	350	739	R	ACA1_077740	complement(join(<350..541,713..>739))	Acanthamoeba castellanii str. Neff	14915147
ACA1_077750	mRNA	ACA1_077750	NW_004457365.1	3273	3497	R	ACA1_077750	complement(<3273..>3497)	Acanthamoeba castellanii str. Neff	14915148
ACA1_077760	mRNA	ACA1_077760	NW_004457365.1	6057	6956	D	ACA1_077760	join(<6057..6246,6429..6855,6899..>6956)	Acanthamoeba castellanii str. Neff	14915160
ACA1_077770	mRNA	ACA1_077770	NW_004457365.1	8988	10064	D	ACA1_077770	join(<8988..9265,9374..>10064)	Acanthamoeba castellanii str. Neff	14915161
ACA1_077780	mRNA	ACA1_077780	NW_004457365.1	10861	12471	D	ACA1_077780	<10861..>12471	Acanthamoeba castellanii str. Neff	14915162
ACA1_077790	mRNA	ACA1_077790	NW_004457365.1	12554	13108	D	ACA1_077790	<12554..>13108	Acanthamoeba castellanii str. Neff	14915163
ACA1_077800	mRNA	ACA1_077800	NW_004457365.1	13221	13876	R	ACA1_077800	complement(join(<13221..13299,13435..13682,13796..>13876))	Acanthamoeba castellanii str. Neff	14915164
ACA1_077810	mRNA	ACA1_077810	NW_004457365.1	14175	14690	D	ACA1_077810	join(<14175..14582,14598..>14690)	Acanthamoeba castellanii str. Neff	14915149
ACA1_077820	mRNA	ACA1_077820	NW_004457365.1	14773	15330	D	ACA1_077820	<14773..>15330	Acanthamoeba castellanii str. Neff	14915150
ACA1_077830	mRNA	ACA1_077830	NW_004457365.1	15453	27242	R	ACA1_077830	complement(join(<15453..15531,15653..15900,16014..16180,16264..16334,16411..16527,16624..16760,16849..17151,17274..18044,18110..18270,18391..18571,18664..18830,18949..19264,19346..19484,19564..20765,20860..21551,21652..21762,21870..22077,22184..22285,22409..23158,23255..23794,23902..24091,24179..24300,24394..24621,24740..24955,25053..25838,25907..26121,26196..26307,26523..>27242))	Acanthamoeba castellanii str. Neff	14915151
ACA1_077840	mRNA	ACA1_077840	NW_004457365.1	28119	28358	D	ACA1_077840	<28119..>28358	Acanthamoeba castellanii str. Neff	14915152
ACA1_077850	mRNA	ACA1_077850	NW_004457365.1	28532	32245	R	ACA1_077850	complement(join(<28532..28727,28874..28982,29300..29421,29562..29663,29860..30012,30222..30288,30533..30698,30787..30990,31084..31161,31279..31407,31779..31958,32042..>32245))	Acanthamoeba castellanii str. Neff	14915153
ACA1_077860	mRNA	ACA1_077860	NW_004457365.1	33256	33957	D	ACA1_077860	<33256..>33957	Acanthamoeba castellanii str. Neff	14915154
ACA1_077870	mRNA	ACA1_077870	NW_004457365.1	34563	35642	D	ACA1_077870	join(<34563..34834,34901..34941,35062..35191,35255..>35642)	Acanthamoeba castellanii str. Neff	14915165
ACA1_077880	mRNA	ACA1_077880	NW_004457365.1	35790	36665	D	ACA1_077880	<35790..>36665	Acanthamoeba castellanii str. Neff	14915166
ACA1_077890	mRNA	ACA1_077890	NW_004457365.1	37111	38658	D	ACA1_077890	<37111..>38658	Acanthamoeba castellanii str. Neff	14915167
ACA1_077900	mRNA	ACA1_077900	NW_004457365.1	38848	40638	D	ACA1_077900	join(<38848..38932,39006..39383,39461..39526,39616..39708,39790..39870,39952..40026,40134..40214,40300..40374,40460..40540,40598..>40638)	Acanthamoeba castellanii str. Neff	14915168
ACA1_077910	mRNA	ACA1_077910	NW_004457365.1	41352	41660	R	ACA1_077910	complement(<41352..>41660)	Acanthamoeba castellanii str. Neff	14915169
ACA1_077920	mRNA	ACA1_077920	NW_004457365.1	42219	43649	R	ACA1_077920	complement(join(<42219..42390,42492..42579,42710..42862,42971..43107,43182..43299,43421..>43649))	Acanthamoeba castellanii str. Neff	14915170
ACA1_077930	mRNA	ACA1_077930	NW_004457365.1	43917	45548	D	ACA1_077930	join(<43917..44021,44113..44154,44253..44329,44415..44478,44566..44691,44768..44845,44913..45123,45271..>45548)	Acanthamoeba castellanii str. Neff	14915171
ACA1_077940	mRNA	ACA1_077940	NW_004457365.1	45967	47058	R	ACA1_077940	complement(join(<45967..46186,46272..46782,46881..>47058))	Acanthamoeba castellanii str. Neff	14915155
ACA1_077950	mRNA	ACA1_077950	NW_004457365.1	49058	50220	R	ACA1_077950	complement(join(<49058..49090,49184..49310,49395..49650,49799..49951,50043..>50220))	Acanthamoeba castellanii str. Neff	14915156
ACA1_077960	mRNA	ACA1_077960	NW_004457365.1	51163	56891	R	ACA1_077960	complement(join(<51163..51431,51562..51702,51776..51908,52216..52507,52606..52701,52842..52916,53008..53096,53177..53974,54064..54211,54463..54577,54699..54827,54908..55015,55107..55175,55279..55305,55479..55547,55656..56019,56106..56231,56384..56626,56778..>56891))	Acanthamoeba castellanii str. Neff	14915157
ACA1_077970	mRNA	ACA1_077970	NW_004457365.1	57339	59311	D	ACA1_077970	join(<57339..57842,57971..58118,58209..58327,58364..>59311)	Acanthamoeba castellanii str. Neff	14915158
ACA1_077980	mRNA	ACA1_077980	NW_004457365.1	60196	66080	D	ACA1_077980	join(<60196..62096,62108..62453,62523..63048,63143..63564,63666..63746,63860..64012,64111..64224,64333..64410,64508..64633,65046..65100,65232..65295,65440..65638,65767..65900,66011..>66080)	Acanthamoeba castellanii str. Neff	14915159
ACA1_077990	mRNA	ACA1_077990	NW_004457365.1	66186	67148	R	ACA1_077990	complement(join(<66186..66273,66348..66449,66508..66653,66759..>67148))	Acanthamoeba castellanii str. Neff	14915137
ACA1_078000	mRNA	ACA1_078000	NW_004457365.1	67816	69418	D	ACA1_078000	join(<67816..67926,68016..68156,68227..68271,68352..68609,68701..68878,68947..69049,69142..>69418)	Acanthamoeba castellanii str. Neff	14915138
ACA1_078010	mRNA	ACA1_078010	NW_004457365.1	70076	71133	R	ACA1_078010	complement(join(<70076..70094,70254..70408,70496..70609,70757..70854,71013..>71133))	Acanthamoeba castellanii str. Neff	14915139
ACA1_078020	mRNA	ACA1_078020	NW_004457365.1	71292	76774	R	ACA1_078020	complement(join(<71292..73441,73542..73760,73866..73985,74102..75167,75269..76012,76077..76198,76306..>76774))	Acanthamoeba castellanii str. Neff	14915140
ACA1_078030	mRNA	ACA1_078030	NW_004457365.1	77046	78606	D	ACA1_078030	join(<77046..77121,77211..77272,77343..77491,77589..77732,77848..77929,78114..78335,78457..>78606)	Acanthamoeba castellanii str. Neff	14915141
ACA1_078040	mRNA	ACA1_078040	NW_004457365.1	78855	81453	D	ACA1_078040	join(<78855..78975,79150..79264,79400..79500,79612..79851,79962..80059,80176..80268,80407..80580,80692..80925,81034..81123,81232..>81453)	Acanthamoeba castellanii str. Neff	14915142
ACA1_078060	mRNA	ACA1_078060	NW_004457365.1	84187	89758	D	ACA1_078060	join(<84187..84207,84363..84569,84649..85780,86277..86666,86795..86988,87109..89278,89366..89478,89627..>89758)	Acanthamoeba castellanii str. Neff	14915144
ACA1_078070	mRNA	ACA1_078070	NW_004457365.1	90694	91707	D	ACA1_078070	<90694..>91707	Acanthamoeba castellanii str. Neff	14915145
ACA1_078080	mRNA	ACA1_078080	NW_004457365.1	92689	96131	D	ACA1_078080	join(<92689..92820,92946..93058,93164..93282,93411..94009,94138..94180,94307..94528,94690..94824,94928..95089,95162..95473,95584..95743,95835..96034,96056..>96131)	Acanthamoeba castellanii str. Neff	14915146
ACA1_191480	mRNA	ACA1_191480	NW_004457364.1	11	1495	R	ACA1_191480	complement(join(<11..186,290..491,577..673,767..944,1042..1166,1254..>1495))	Acanthamoeba castellanii str. Neff	14915047
ACA1_191490	mRNA	ACA1_191490	NW_004457364.1	1649	3789	R	ACA1_191490	complement(join(<1649..1778,1883..2076,2183..2272,2374..2550,2613..3123,3198..3346,3417..3530,3631..>3789))	Acanthamoeba castellanii str. Neff	14915046
ACA1_191500	mRNA	ACA1_191500	NW_004457364.1	3905	6541	R	ACA1_191500	complement(join(<3905..4122,4262..4356,4445..5039,5168..5246,5322..5425,5534..5768,6023..>6541))	Acanthamoeba castellanii str. Neff	14915135
ACA1_191510	mRNA	ACA1_191510	NW_004457364.1	6989	8664	D	ACA1_191510	join(<6989..6996,7034..7246,7284..7458,7585..7716,8252..8315,8435..>8664)	Acanthamoeba castellanii str. Neff	14915136
ACA1_191520	mRNA	ACA1_191520	NW_004457364.1	8804	10952	R	ACA1_191520	complement(join(<8804..9067,9177..9344,9456..9601,9698..9752,9894..10144,10252..10423,10549..10693,10861..>10952))	Acanthamoeba castellanii str. Neff	14915089
ACA1_191530	mRNA	ACA1_191530	NW_004457364.1	11180	13008	D	ACA1_191530	join(<11180..11293,11448..11553,11650..11801,11935..12297,12401..12661,12802..>13008)	Acanthamoeba castellanii str. Neff	14915090
ACA1_191540	mRNA	ACA1_191540	NW_004457364.1	13278	14434	R	ACA1_191540	complement(join(<13278..13310,13409..13686,13802..13925,14021..14133,14245..>14434))	Acanthamoeba castellanii str. Neff	14915091
ACA1_191550	mRNA	ACA1_191550	NW_004457364.1	14727	15714	D	ACA1_191550	join(<14727..14829,14973..15154,15313..>15714)	Acanthamoeba castellanii str. Neff	14915048
ACA1_191560	mRNA	ACA1_191560	NW_004457364.1	15904	17633	R	ACA1_191560	complement(join(<15904..17253,17541..>17633))	Acanthamoeba castellanii str. Neff	14915049
ACA1_191570	mRNA	ACA1_191570	NW_004457364.1	17864	19921	D	ACA1_191570	join(<17864..18065,18235..18343,18546..18596,18896..18987,19156..19249,19372..19522,19613..19673,19779..>19921)	Acanthamoeba castellanii str. Neff	14915050
ACA1_191580	mRNA	ACA1_191580	NW_004457364.1	20005	27045	R	ACA1_191580	complement(join(<20005..20162,20253..20514,20606..20707,20725..20781,20982..21080,21227..21309,21461..21566,21591..21842,21972..22032,22234..22298,22454..22546,22637..22757,22895..22975,23094..23178,23276..23315,23479..23678,23713..23780,23796..23911,24013..24162,24300..24476,24636..24760,24886..24940,25043..25132,25209..25291,25389..25487,25606..25710,25882..26063,26117..26432,26639..26936,26983..>27045))	Acanthamoeba castellanii str. Neff	14915092
ACA1_191590	mRNA	ACA1_191590	NW_004457364.1	27288	31794	R	ACA1_191590	complement(join(<27288..28823,29003..29054,29173..29291,29391..29509,29596..29739,29859..30141,30267..30404,30570..31024,31128..31355,31716..>31794))	Acanthamoeba castellanii str. Neff	14915093
ACA1_191700	mRNA	ACA1_191700	NW_004457364.1	33014	35960	R	ACA1_191700	complement(join(<33014..33044,33141..33276,33366..33486,33612..33707,33799..33937,34058..34242,34379..34554,34689..34786,34873..34973,35080..35132,35230..35354,35785..>35960))	Acanthamoeba castellanii str. Neff	14915094
ACA1_191710	mRNA	ACA1_191710	NW_004457364.1	36905	38765	D	ACA1_191710	join(<36905..37099,37318..37390,37537..37752,38344..>38765)	Acanthamoeba castellanii str. Neff	14915095
ACA1_191840	mRNA	ACA1_191840	NW_004457364.1	50878	54636	D	ACA1_191840	join(<50878..50921,51012..51144,51252..51292,51357..51450,51511..51568,51635..51810,51915..52069,52163..52257,52338..52454,52516..52680,52789..53269,53355..53394,53489..53596,53883..53994,54014..54126,54190..54345,54595..>54636)	Acanthamoeba castellanii str. Neff	14915078
ACA1_191850	mRNA	ACA1_191850	NW_004457364.1	57205	59220	R	ACA1_191850	complement(join(<57205..57359,57777..57824,57898..57923,57994..58048,58147..58183,58465..58549,58663..58883,59075..59090,59171..>59220))	Acanthamoeba castellanii str. Neff	14915079
ACA1_191860	mRNA	ACA1_191860	NW_004457364.1	59708	60722	D	ACA1_191860	join(<59708..60119,60208..60396,60506..60585,60660..>60722)	Acanthamoeba castellanii str. Neff	14915080
ACA1_191870	mRNA	ACA1_191870	NW_004457364.1	61464	62524	D	ACA1_191870	join(<61464..61526,61627..61767,61846..61941,62021..62067,62263..62380,62420..>62524)	Acanthamoeba castellanii str. Neff	14915081
ACA1_191880	mRNA	ACA1_191880	NW_004457364.1	62855	66665	D	ACA1_191880	join(<62855..63112,63223..63470,63586..63946,64069..64188,64383..64837,64959..65330,65538..65662,65876..66044,66204..66321,66459..>66665)	Acanthamoeba castellanii str. Neff	14915082
ACA1_191890	mRNA	ACA1_191890	NW_004457364.1	66855	67767	R	ACA1_191890	complement(join(<66855..66940,67004..67169,67285..67437,67645..>67767))	Acanthamoeba castellanii str. Neff	14915083
ACA1_192000	mRNA	ACA1_192000	NW_004457364.1	68565	72800	R	ACA1_192000	complement(join(<68565..68789,69010..69101,69228..69439,69654..69721,70157..70284,70405..70515,70622..70706,70884..71036,71238..71393,71471..71611,71801..71884,72011..72121,72382..72497,72617..>72800))	Acanthamoeba castellanii str. Neff	14915084
ACA1_192010	mRNA	ACA1_192010	NW_004457364.1	72967	74315	D	ACA1_192010	join(<72967..73010,73111..73257,73431..73702,73984..>74315)	Acanthamoeba castellanii str. Neff	14915085
ACA1_192020	mRNA	ACA1_192020	NW_004457364.1	74731	77087	D	ACA1_192020	join(<74731..74755,74852..74976,75183..75264,75418..75623,75857..76032,76169..76388,76566..76667,76743..76837,76940..>77087)	Acanthamoeba castellanii str. Neff	14915086
ACA1_192030	mRNA	ACA1_192030	NW_004457364.1	77279	82890	R	ACA1_192030	complement(join(<77279..77423,77559..77816,77947..78092,78277..78441,78581..78702,78867..78989,79115..79505,79594..79923,80016..80249,80346..80483,80638..80706,80898..80954,81076..81225,81453..81550,81700..82030,82146..82280,82411..82485,82546..82568,82731..>82890))	Acanthamoeba castellanii str. Neff	14915087
ACA1_192040	mRNA	ACA1_192040	NW_004457364.1	83086	83455	D	ACA1_192040	join(<83086..83090,83135..83215,83317..>83455)	Acanthamoeba castellanii str. Neff	14915088
ACA1_192050	mRNA	ACA1_192050	NW_004457364.1	83823	86274	R	ACA1_192050	complement(join(<83823..83884,84024..84237,84332..84568,84711..84829,84959..85033,85130..85265,85350..85596,85781..86092,86168..86220,86254..>86274))	Acanthamoeba castellanii str. Neff	14915065
ACA1_192060	mRNA	ACA1_192060	NW_004457364.1	86455	89828	R	ACA1_192060	complement(join(<86455..86559,86657..86770,86897..87128,87255..87452,87596..87777,87869..88049,88164..88291,88383..88490,88599..88706,88799..88909,89038..89199,89355..>89828))	Acanthamoeba castellanii str. Neff	14915066
ACA1_192070	mRNA	ACA1_192070	NW_004457364.1	90633	95091	D	ACA1_192070	join(<90633..90689,90788..90892,91055..91222,91539..92072,92189..92333,92469..92878,92992..93487,93585..93730,93814..93937,94060..94908,95039..>95091)	Acanthamoeba castellanii str. Neff	14915067
ACA1_192080	mRNA	ACA1_192080	NW_004457364.1	95344	96022	R	ACA1_192080	complement(join(<95344..95652,95728..95810,95959..>96022))	Acanthamoeba castellanii str. Neff	14915068
ACA1_192090	mRNA	ACA1_192090	NW_004457364.1	96532	100043	R	ACA1_192090	complement(join(<96532..96691,96780..97334,97428..97578,97700..97891,98020..98159,98289..98371,98522..98665,98774..98932,99072..99177,99290..99381,99499..99561,99695..99783,99950..>100043))	Acanthamoeba castellanii str. Neff	14915069
ACA1_192100	mRNA	ACA1_192100	NW_004457364.1	100489	101280	D	ACA1_192100	join(<100489..100574,100653..100759,100937..101031,101203..>101280)	Acanthamoeba castellanii str. Neff	14915070
ACA1_192110	mRNA	ACA1_192110	NW_004457364.1	101865	104655	D	ACA1_192110	join(<101865..102401,102466..102657,102820..>104655)	Acanthamoeba castellanii str. Neff	14915071
ACA1_192120	mRNA	ACA1_192120	NW_004457364.1	104767	110484	R	ACA1_192120	complement(join(<104767..105013,105108..105285,105393..105601,105706..105846,105983..106079,106199..106361,106487..106615,106729..106826,106910..107010,107147..107970,108225..108352,108486..108709,108822..109617,110397..>110484))	Acanthamoeba castellanii str. Neff	14915072
ACA1_192330	mRNA	ACA1_192330	NW_004457364.1	111859	118247	R	ACA1_192330	complement(join(<111859..112092,112164..112452,112538..112676,112784..113066,113195..113483,113574..113649,113726..113876,113987..114184,114276..114473,114573..114737,114749..114789,114863..115177,115329..115503,115607..115717,115790..115915,115993..116299,116385..116452,116519..116760,116852..117065,117156..117430,117500..117649,117777..118077,118176..>118247))	Acanthamoeba castellanii str. Neff	14915073
ACA1_192340	mRNA	ACA1_192340	NW_004457364.1	121553	125860	D	ACA1_192340	join(<121553..121993,122085..122193,122358..122468,122563..122664,122763..122869,122979..123117,123237..123337,123458..123535,123640..123847,123995..124083,124207..124548,124565..124614,124695..124848,124929..125107,125181..125256,125375..125632,125720..>125860)	Acanthamoeba castellanii str. Neff	14915074
ACA1_192350	mRNA	ACA1_192350	NW_004457364.1	126076	127747	R	ACA1_192350	complement(join(<126076..126271,126394..126559,126653..126929,127181..127351,127715..>127747))	Acanthamoeba castellanii str. Neff	14915075
ACA1_192360	mRNA	ACA1_192360	NW_004457364.1	127844	128531	D	ACA1_192360	join(<127844..127917,128041..128129,128218..128275,128372..>128531)	Acanthamoeba castellanii str. Neff	14915051
ACA1_192370	mRNA	ACA1_192370	NW_004457364.1	128737	130889	R	ACA1_192370	complement(join(<128737..129032,129110..129266,129369..129530,129606..129668,129762..129850,130196..130322,130528..130596,130752..>130889))	Acanthamoeba castellanii str. Neff	14915052
ACA1_192580	mRNA	ACA1_192580	NW_004457364.1	131359	134518	D	ACA1_192580	join(<131359..131966,132000..132445,132623..132696,132834..132944,133058..133222,133294..133375,133454..133622,133748..133881,134025..>134518)	Acanthamoeba castellanii str. Neff	14915053
ACA1_192600	mRNA	ACA1_192600	NW_004457364.1	136765	137838	R	ACA1_192600	complement(join(<136765..136851,136941..137043,137135..137232,137338..137402,137489..137587,137676..>137838))	Acanthamoeba castellanii str. Neff	14915055
ACA1_192610	mRNA	ACA1_192610	NW_004457364.1	138852	139661	D	ACA1_192610	join(<138852..138912,139009..139148,139319..139452,139595..>139661)	Acanthamoeba castellanii str. Neff	14915056
ACA1_192620	mRNA	ACA1_192620	NW_004457364.1	139856	140068	R	ACA1_192620	complement(<139856..>140068)	Acanthamoeba castellanii str. Neff	14915057
ACA1_192630	mRNA	ACA1_192630	NW_004457364.1	141773	142132	R	ACA1_192630	complement(<141773..>142132)	Acanthamoeba castellanii str. Neff	14915058
ACA1_192660	mRNA	ACA1_192660	NW_004457364.1	148131	150806	D	ACA1_192660	join(<148131..148227,148326..148406,148487..148671,148840..148908,148988..149069,149143..149272,149391..149551,149663..149775,149906..150021,150144..150279,150350..150478,150558..>150806)	Acanthamoeba castellanii str. Neff	14915061
ACA1_192670	mRNA	ACA1_192670	NW_004457364.1	151160	154084	D	ACA1_192670	join(<151160..151205,151291..151408,151511..151620,151752..151816,151903..151964,152075..152213,152570..152699,152784..153023,153146..153215,153243..153312,153433..153524,153627..153693,153824..>154084)	Acanthamoeba castellanii str. Neff	14915062
ACA1_192680	mRNA	ACA1_192680	NW_004457364.1	154257	156144	R	ACA1_192680	complement(join(<154257..154329,154455..154654,154733..154920,155044..155125,155265..155533,155635..155827,156040..>156144))	Acanthamoeba castellanii str. Neff	14915063
ACA1_192690	mRNA	ACA1_192690	NW_004457364.1	156143	157807	D	ACA1_192690	join(<156143..156158,156509..156579,156622..156774,156863..157057,157171..157611,157751..>157807)	Acanthamoeba castellanii str. Neff	14915064
ACA1_192700	mRNA	ACA1_192700	NW_004457364.1	157988	160746	D	ACA1_192700	join(<157988..158274,158437..158621,158805..159028,159124..159233,159324..159426,159544..159689,159792..159913,160013..160091,160186..160391,160529..>160746)	Acanthamoeba castellanii str. Neff	14915111
ACA1_192710	mRNA	ACA1_192710	NW_004457364.1	161355	164256	D	ACA1_192710	join(<161355..161988,162104..162286,162376..162477,162541..162684,162785..162854,162927..163101,163240..163367,163451..163655,163730..163826,163908..164008,164113..>164256)	Acanthamoeba castellanii str. Neff	14915110
ACA1_192720	mRNA	ACA1_192720	NW_004457364.1	164980	166068	R	ACA1_192720	complement(join(<164980..165506,165636..165836,165942..>166068))	Acanthamoeba castellanii str. Neff	14915112
ACA1_192830	mRNA	ACA1_192830	NW_004457364.1	166442	167033	D	ACA1_192830	join(<166442..166510,166553..166705,166839..>167033)	Acanthamoeba castellanii str. Neff	14915113
ACA1_192940	mRNA	ACA1_192940	NW_004457364.1	169112	170544	R	ACA1_192940	complement(join(<169112..169486,169579..169811,169901..169996,170073..170197,170273..>170544))	Acanthamoeba castellanii str. Neff	14915114
ACA1_192950	mRNA	ACA1_192950	NW_004457364.1	170680	171052	R	ACA1_192950	complement(join(<170680..170829,170853..171009,171042..>171052))	Acanthamoeba castellanii str. Neff	14915115
ACA1_192960	mRNA	ACA1_192960	NW_004457364.1	171289	173545	R	ACA1_192960	complement(join(<171289..171818,171947..172147,172250..172383,172481..172629,172758..172886,173168..>173545))	Acanthamoeba castellanii str. Neff	14915116
ACA1_192970	mRNA	ACA1_192970	NW_004457364.1	173660	174616	R	ACA1_192970	complement(join(<173660..173824,173908..174036,174173..174235,174301..174409,174522..>174616))	Acanthamoeba castellanii str. Neff	14915117
ACA1_192980	mRNA	ACA1_192980	NW_004457364.1	174762	175872	R	ACA1_192980	complement(join(<174762..175352,175462..>175872))	Acanthamoeba castellanii str. Neff	14915118
ACA1_192990	mRNA	ACA1_192990	NW_004457364.1	176209	182098	R	ACA1_192990	complement(join(<176209..176346,176426..176506,176642..176784,176909..177081,177202..177328,177431..177554,177708..177842,177966..178054,178156..178228,178355..178529,178616..178773,178934..179137,179228..179293,179381..179428,179525..179590,179672..179737,179824..179958,180121..180258,180360..180549,180826..180911,181042..181143,181255..181320,181432..181523,181612..181686,181817..181847,181967..>182098))	Acanthamoeba castellanii str. Neff	14915119
ACA1_193100	mRNA	ACA1_193100	NW_004457364.1	183312	184870	D	ACA1_193100	join(<183312..183326,183483..183561,183715..183860,183957..184039,184152..184290,184406..184559,184665..184725,184831..>184870)	Acanthamoeba castellanii str. Neff	14915120
ACA1_193110	mRNA	ACA1_193110	NW_004457364.1	185030	186841	R	ACA1_193110	complement(join(<185030..185314,185483..185617,185693..185835,185925..186002,186115..186202,186291..186475,186611..186698,186809..>186841))	Acanthamoeba castellanii str. Neff	14915121
ACA1_193120	mRNA	ACA1_193120	NW_004457364.1	190982	192183	D	ACA1_193120	join(<190982..191124,191253..191333,191440..191511,191652..>192183)	Acanthamoeba castellanii str. Neff	14915122
ACA1_193130	mRNA	ACA1_193130	NW_004457364.1	192277	194100	R	ACA1_193130	complement(join(<192277..192351,192442..192521,192603..192717,192795..192862,192959..193111,193221..193343,193452..193543,193642..193754,194008..>194100))	Acanthamoeba castellanii str. Neff	14915123
ACA1_193140	mRNA	ACA1_193140	NW_004457364.1	194403	196352	D	ACA1_193140	join(<194403..194497,194798..194944,195033..195109,195218..195334,195458..195610,195696..195778,195868..195982,196057..196145,196242..>196352)	Acanthamoeba castellanii str. Neff	14915124
ACA1_193150	mRNA	ACA1_193150	NW_004457364.1	196482	198148	R	ACA1_193150	complement(join(<196482..196540,196631..196775,196844..197145,197251..197367,197485..197576,197708..197820,197913..197924,197999..>198148))	Acanthamoeba castellanii str. Neff	14915125
ACA1_193160	mRNA	ACA1_193160	NW_004457364.1	198720	202835	R	ACA1_193160	complement(join(<198720..199049,199063..199564,199695..200153,200255..200809,200927..201018,201113..201196,201286..201357,201559..201749,201909..202435,202564..>202835))	Acanthamoeba castellanii str. Neff	14915126
ACA1_193170	mRNA	ACA1_193170	NW_004457364.1	202972	205470	R	ACA1_193170	complement(join(<202972..203669,203782..203962,204222..204307,204454..204511,204655..204819,204899..204994,205100..205181,205313..>205470))	Acanthamoeba castellanii str. Neff	14915127
ACA1_193180	mRNA	ACA1_193180	NW_004457364.1	205878	207706	D	ACA1_193180	join(<205878..206023,206118..206163,206278..206513,206608..206836,206930..207220,207289..207506,207583..>207706)	Acanthamoeba castellanii str. Neff	14915128
ACA1_193190	mRNA	ACA1_193190	NW_004457364.1	207894	208817	R	ACA1_193190	complement(join(<207894..208023,208091..208172,208252..208345,208463..208556,208672..>208817))	Acanthamoeba castellanii str. Neff	14915129
ACA1_193200	mRNA	ACA1_193200	NW_004457364.1	209051	209791	D	ACA1_193200	join(<209051..209291,209400..209503,209582..>209791)	Acanthamoeba castellanii str. Neff	14915130
ACA1_193210	mRNA	ACA1_193210	NW_004457364.1	209895	210377	R	ACA1_193210	complement(<209895..>210377)	Acanthamoeba castellanii str. Neff	14915131
ACA1_193220	mRNA	ACA1_193220	NW_004457364.1	210772	212264	D	ACA1_193220	join(<210772..210873,211039..211269,211363..211498,211609..211717,211846..212051,212167..>212264)	Acanthamoeba castellanii str. Neff	14915132
ACA1_193230	mRNA	ACA1_193230	NW_004457364.1	212467	213494	D	ACA1_193230	join(<212467..212585,212646..212733,212798..212965,213042..213281,213366..>213494)	Acanthamoeba castellanii str. Neff	14915133
ACA1_193240	mRNA	ACA1_193240	NW_004457364.1	214025	216407	R	ACA1_193240	complement(join(<214025..214293,214422..214527,214695..214836,214966..215104,215225..215367,215532..215745,215848..216006,216167..>216407))	Acanthamoeba castellanii str. Neff	14915134
ACA1_193250	mRNA	ACA1_193250	NW_004457364.1	216489	218556	R	ACA1_193250	complement(join(<216489..216791,216948..217100,217161..217262,217548..217637,217759..217973,218093..218240,218263..>218556))	Acanthamoeba castellanii str. Neff	14915096
ACA1_193260	mRNA	ACA1_193260	NW_004457364.1	219027	219882	R	ACA1_193260	complement(join(<219027..219194,219262..>219882))	Acanthamoeba castellanii str. Neff	14915097
ACA1_193270	mRNA	ACA1_193270	NW_004457364.1	220143	220788	D	ACA1_193270	join(<220143..220289,220411..220579,220697..>220788)	Acanthamoeba castellanii str. Neff	14915098
ACA1_193280	mRNA	ACA1_193280	NW_004457364.1	221115	221880	R	ACA1_193280	complement(join(<221115..221245,221398..221657,221774..>221880))	Acanthamoeba castellanii str. Neff	14915099
ACA1_193290	mRNA	ACA1_193290	NW_004457364.1	222575	225029	R	ACA1_193290	complement(join(<222575..222634,222832..222908,222987..223532,223614..223751,223865..224122,224256..224453,224544..224661,224778..224873,224979..>225029))	Acanthamoeba castellanii str. Neff	14915100
ACA1_193300	mRNA	ACA1_193300	NW_004457364.1	226119	227715	D	ACA1_193300	join(<226119..226619,226742..226919,227178..227342,227438..227572,227645..>227715)	Acanthamoeba castellanii str. Neff	14915101
ACA1_193310	mRNA	ACA1_193310	NW_004457364.1	229838	230749	D	ACA1_193310	<229838..>230749	Acanthamoeba castellanii str. Neff	14915102
ACA1_193320	mRNA	ACA1_193320	NW_004457364.1	231045	234556	R	ACA1_193320	complement(join(<231045..231312,231403..231548,231655..231798,231882..232152,232226..232384,232464..232922,232995..233128,233203..233278,233344..233411,233666..233922,233995..234118,234347..>234556))	Acanthamoeba castellanii str. Neff	14915103
ACA1_193330	mRNA	ACA1_193330	NW_004457364.1	235041	235674	D	ACA1_193330	join(<235041..235407,235487..>235674)	Acanthamoeba castellanii str. Neff	14915104
ACA1_193340	mRNA	ACA1_193340	NW_004457364.1	235920	236947	D	ACA1_193340	join(<235920..236074,236158..236278,236400..236560,236671..>236947)	Acanthamoeba castellanii str. Neff	14915105
ACA1_193450	mRNA	ACA1_193450	NW_004457364.1	238445	239055	R	ACA1_193450	complement(join(<238445..238474,238655..238807,238957..>239055))	Acanthamoeba castellanii str. Neff	14915106
ACA1_193460	mRNA	ACA1_193460	NW_004457364.1	240128	241262	D	ACA1_193460	join(<240128..240211,240724..240822,240919..241017,241110..>241262)	Acanthamoeba castellanii str. Neff	14915107
ACA1_193470	mRNA	ACA1_193470	NW_004457364.1	242576	244198	R	ACA1_193470	complement(join(<242576..243376,243538..243695,243802..>244198))	Acanthamoeba castellanii str. Neff	14915108
ACA1_193480	mRNA	ACA1_193480	NW_004457364.1	246685	246831	D	ACA1_193480	<246685..>246831	Acanthamoeba castellanii str. Neff	14915109
ACA1_193490	mRNA	ACA1_193490	NW_004457364.1	247178	247732	R	ACA1_193490	complement(join(<247178..247234,247355..>247732))	Acanthamoeba castellanii str. Neff	14915039
ACA1_193500	mRNA	ACA1_193500	NW_004457364.1	247742	248044	R	ACA1_193500	complement(join(<247742..247885,247901..>248044))	Acanthamoeba castellanii str. Neff	14915040
ACA1_193510	mRNA	ACA1_193510	NW_004457364.1	248894	249580	R	ACA1_193510	complement(<248894..>249580)	Acanthamoeba castellanii str. Neff	14915041
ACA1_193520	mRNA	ACA1_193520	NW_004457364.1	249934	251746	R	ACA1_193520	complement(join(<249934..250264,250387..250499,250570..250659,250762..250857,250977..251088,251241..251307,251372..251465,251568..251616,251688..>251746))	Acanthamoeba castellanii str. Neff	14915042
ACA1_193530	mRNA	ACA1_193530	NW_004457364.1	252170	253997	D	ACA1_193530	join(<252170..252495,252617..252700,252791..252865,252945..253047,253385..253770,253865..>253997)	Acanthamoeba castellanii str. Neff	14915043
ACA1_193640	mRNA	ACA1_193640	NW_004457364.1	254095	255079	R	ACA1_193640	complement(join(<254095..254468,254584..>255079))	Acanthamoeba castellanii str. Neff	14915044
ACA1_193650	mRNA	ACA1_193650	NW_004457364.1	256301	257128	D	ACA1_193650	<256301..>257128	Acanthamoeba castellanii str. Neff	14915045
ACA1_379610	mRNA	ACA1_379610	NW_004457363.1	33	487	D	ACA1_379610	join(<33..251,329..>487)	Acanthamoeba castellanii str. Neff	14914961
ACA1_379620	mRNA	ACA1_379620	NW_004457363.1	1027	1887	D	ACA1_379620	join(<1027..1466,1701..>1887)	Acanthamoeba castellanii str. Neff	14914974
ACA1_379630	mRNA	ACA1_379630	NW_004457363.1	1989	11989	R	ACA1_379630	complement(join(<1989..2108,2228..2591,2718..3016,3099..3215,3331..3412,3495..3549,3653..3754,4133..4228,4328..4465,4559..4672,4810..4906,4980..5048,5168..5301,5387..5614,5691..5825,5933..6734,7100..7348,7437..7553,7671..7720,8667..8804,8905..9018,9177..9273,9404..9472,9648..9781,9860..10041,10119..10269,10380..11173,11278..11398,11507..11567,11663..>11989))	Acanthamoeba castellanii str. Neff	14914975
ACA1_379840	mRNA	ACA1_379840	NW_004457363.1	12143	13937	R	ACA1_379840	complement(join(<12143..12298,12369..12512,12600..12646,12724..12823,12965..13043,13085..13192,13266..13310,13372..13423,13516..13563,13650..13690,13767..13836,13916..>13937))	Acanthamoeba castellanii str. Neff	14914976
ACA1_379850	mRNA	ACA1_379850	NW_004457363.1	14764	15834	R	ACA1_379850	complement(join(<14764..14820,14892..15065,15212..15456,15571..15643,15706..>15834))	Acanthamoeba castellanii str. Neff	14914982
ACA1_379860	mRNA	ACA1_379860	NW_004457363.1	17845	19525	R	ACA1_379860	complement(join(<17845..17866,18430..18859,18952..>19525))	Acanthamoeba castellanii str. Neff	14914983
ACA1_379970	mRNA	ACA1_379970	NW_004457363.1	19869	21160	R	ACA1_379970	complement(join(<19869..20369,20501..20772,20917..>21160))	Acanthamoeba castellanii str. Neff	14914984
ACA1_379980	mRNA	ACA1_379980	NW_004457363.1	21846	23825	D	ACA1_379980	join(<21846..22217,22383..22774,22897..23365,23439..>23825)	Acanthamoeba castellanii str. Neff	14914985
ACA1_380210	mRNA	ACA1_380210	NW_004457363.1	31880	32936	R	ACA1_380210	complement(join(<31880..32050,32186..32261,32347..32497,32567..32625,32719..>32936))	Acanthamoeba castellanii str. Neff	14914988
ACA1_380220	mRNA	ACA1_380220	NW_004457363.1	33504	34953	D	ACA1_380220	join(<33504..34092,34397..>34953)	Acanthamoeba castellanii str. Neff	14914989
ACA1_380330	mRNA	ACA1_380330	NW_004457363.1	38277	39756	D	ACA1_380330	join(<38277..38705,38806..>39756)	Acanthamoeba castellanii str. Neff	14914990
ACA1_380340	mRNA	ACA1_380340	NW_004457363.1	39833	41507	R	ACA1_380340	complement(join(<39833..40238,40257..40281,40402..40533,40670..40874,40993..41224,41302..>41507))	Acanthamoeba castellanii str. Neff	14914962
ACA1_380350	mRNA	ACA1_380350	NW_004457363.1	41770	47864	D	ACA1_380350	join(<41770..42165,42552..42807,42973..43067,43148..43172,43253..43342,43448..43586,43692..43829,43959..44106,44226..44355,44454..44565,44705..44806,44900..45070,45236..45353,45484..45558,45694..45752,45949..46037,46143..46226,46328..46445,46509..46674,46838..46943,47068..47164,47300..47360,47498..47630,47746..>47864)	Acanthamoeba castellanii str. Neff	14914963
ACA1_380460	mRNA	ACA1_380460	NW_004457363.1	47937	48463	R	ACA1_380460	complement(join(<47937..48186,48297..>48463))	Acanthamoeba castellanii str. Neff	14914964
ACA1_380570	mRNA	ACA1_380570	NW_004457363.1	49043	54626	R	ACA1_380570	complement(join(<49043..49134,49258..49507,49532..50316,50425..50524,50887..51009,51167..51264,51428..51533,51633..51731,51870..52010,52140..52724,52868..52946,53010..53163,53278..53864,53988..54090,54225..54388,54541..>54626))	Acanthamoeba castellanii str. Neff	14914965
ACA1_380580	mRNA	ACA1_380580	NW_004457363.1	55135	55964	R	ACA1_380580	complement(join(<55135..55253,55384..55638,55733..>55964))	Acanthamoeba castellanii str. Neff	14914966
ACA1_380600	mRNA	ACA1_380600	NW_004457363.1	58445	59894	R	ACA1_380600	complement(join(<58445..59042,59152..>59894))	Acanthamoeba castellanii str. Neff	14914968
ACA1_380610	mRNA	ACA1_380610	NW_004457363.1	61367	63067	R	ACA1_380610	complement(join(<61367..62698,62711..>63067))	Acanthamoeba castellanii str. Neff	14914969
ACA1_380620	mRNA	ACA1_380620	NW_004457363.1	64842	65569	D	ACA1_380620	join(<64842..64959,65031..>65569)	Acanthamoeba castellanii str. Neff	14914970
ACA1_380630	mRNA	ACA1_380630	NW_004457363.1	67168	68533	D	ACA1_380630	join(<67168..67488,67761..67899,67995..>68533)	Acanthamoeba castellanii str. Neff	14914971
ACA1_380750	mRNA	ACA1_380750	NW_004457363.1	78903	82725	R	ACA1_380750	complement(join(<78903..79367,79599..79699,79781..80378,80495..80634,80710..80815,80900..81050,81145..81767,81848..82030,82147..>82725))	Acanthamoeba castellanii str. Neff	14914973
ACA1_380760	mRNA	ACA1_380760	NW_004457363.1	83011	84578	D	ACA1_380760	join(<83011..83365,83484..83594,83686..83742,83820..84221,84298..>84578)	Acanthamoeba castellanii str. Neff	14914991
ACA1_380770	mRNA	ACA1_380770	NW_004457363.1	84943	85855	D	ACA1_380770	join(<84943..85131,85208..85324,85410..85668,85761..>85855)	Acanthamoeba castellanii str. Neff	14914992
ACA1_380780	mRNA	ACA1_380780	NW_004457363.1	86030	89303	R	ACA1_380780	complement(join(<86030..86594,86685..86790,86892..87267,87364..87539,87624..87856,87921..88004,88082..88166,88246..88355,88450..88541,88646..88813,88890..88922,89007..>89303))	Acanthamoeba castellanii str. Neff	14914993
ACA1_380790	mRNA	ACA1_380790	NW_004457363.1	89564	90975	R	ACA1_380790	complement(join(<89564..90929,90944..>90975))	Acanthamoeba castellanii str. Neff	14914994
ACA1_380800	mRNA	ACA1_380800	NW_004457363.1	91511	91942	D	ACA1_380800	<91511..>91942	Acanthamoeba castellanii str. Neff	14914995
ACA1_380810	mRNA	ACA1_380810	NW_004457363.1	92058	92772	R	ACA1_380810	complement(join(<92058..92263,92340..92486,92592..>92772))	Acanthamoeba castellanii str. Neff	14914996
ACA1_380820	mRNA	ACA1_380820	NW_004457363.1	93312	94549	D	ACA1_380820	join(<93312..93336,93405..93466,93536..93736,93812..93901,93959..94042,94112..94224,94299..94393,94458..>94549)	Acanthamoeba castellanii str. Neff	14914997
ACA1_380830	mRNA	ACA1_380830	NW_004457363.1	95059	96431	D	ACA1_380830	join(<95059..95179,95289..95403,95481..95739,95754..>96431)	Acanthamoeba castellanii str. Neff	14914998
ACA1_380840	mRNA	ACA1_380840	NW_004457363.1	96764	99029	D	ACA1_380840	join(<96764..97213,97329..97431,97577..98007,98110..98192,98335..98783,98866..>99029)	Acanthamoeba castellanii str. Neff	14914999
ACA1_380850	mRNA	ACA1_380850	NW_004457363.1	99479	100995	R	ACA1_380850	complement(join(<99479..100342,100474..100572,100710..100822,100929..>100995))	Acanthamoeba castellanii str. Neff	14915000
ACA1_380860	mRNA	ACA1_380860	NW_004457363.1	101271	102611	D	ACA1_380860	join(<101271..101453,101530..101592,101624..101828,101941..102077,102190..102299,102404..>102611)	Acanthamoeba castellanii str. Neff	14915001
ACA1_380870	mRNA	ACA1_380870	NW_004457363.1	102813	105034	D	ACA1_380870	join(<102813..103171,103254..103329,103488..103628,103767..104150,104270..104372,104448..104738,104814..>105034)	Acanthamoeba castellanii str. Neff	14915002
ACA1_380880	mRNA	ACA1_380880	NW_004457363.1	105165	106485	R	ACA1_380880	complement(join(<105165..105665,105677..106055,106154..106268,106359..>106485))	Acanthamoeba castellanii str. Neff	14915003
ACA1_380890	mRNA	ACA1_380890	NW_004457363.1	107264	112592	R	ACA1_380890	complement(join(<107264..108101,108180..108300,108386..108487,108571..108714,108777..108912,108997..109164,109232..109346,109440..110814,110829..111728,111859..112233,112370..>112592))	Acanthamoeba castellanii str. Neff	14915028
ACA1_380900	mRNA	ACA1_380900	NW_004457363.1	113037	114230	D	ACA1_380900	join(<113037..113151,113234..113318,113387..>114230)	Acanthamoeba castellanii str. Neff	14915029
ACA1_380910	mRNA	ACA1_380910	NW_004457363.1	114362	116283	D	ACA1_380910	join(<114362..114465,114515..114542,114717..114932,114992..115068,115157..115235,115332..115406,115477..115560,115635..115748,115825..115927,116008..116101,116190..>116283)	Acanthamoeba castellanii str. Neff	14915030
ACA1_380920	mRNA	ACA1_380920	NW_004457363.1	116497	117053	D	ACA1_380920	join(<116497..116574,116613..>117053)	Acanthamoeba castellanii str. Neff	14915031
ACA1_380930	mRNA	ACA1_380930	NW_004457363.1	117206	119230	R	ACA1_380930	complement(join(<117206..117716,117849..118027,118125..118345,118451..118625,118697..118788,118864..>119230))	Acanthamoeba castellanii str. Neff	14915032
ACA1_380940	mRNA	ACA1_380940	NW_004457363.1	121464	122210	D	ACA1_380940	<121464..>122210	Acanthamoeba castellanii str. Neff	14915033
ACA1_380950	mRNA	ACA1_380950	NW_004457363.1	122696	124794	D	ACA1_380950	join(<122696..122812,122935..122999,123084..123141,123217..123265,123363..123457,123572..123668,123762..123812,123918..124115,124197..124253,124328..124414,124510..124617,124724..>124794)	Acanthamoeba castellanii str. Neff	14915034
ACA1_380960	mRNA	ACA1_380960	NW_004457363.1	124916	128376	R	ACA1_380960	complement(join(<124916..125199,125412..125466,125526..125677,125749..125865,126014..126211,126310..126373,126493..126581,126694..126791,126916..126993,127127..>128376))	Acanthamoeba castellanii str. Neff	14915035
ACA1_380970	mRNA	ACA1_380970	NW_004457363.1	129028	134153	D	ACA1_380970	join(<129028..129728,129851..130020,130099..130324,130508..131255,131429..131524,131634..131841,131932..132603,132689..132951,133039..133254,133386..133479,133597..133758,133867..>134153)	Acanthamoeba castellanii str. Neff	14915036
ACA1_380980	mRNA	ACA1_380980	NW_004457363.1	134317	142796	R	ACA1_380980	complement(join(<134317..134511,134658..134767,134899..135001,135118..135161,135278..135334,135422..135494,135622..135634,135716..135800,135917..136028,136161..136215,136295..136359,136495..136614,136796..136884,136960..137035,137122..137184,137311..137415,137508..137590,137679..137750,137865..137966,138072..138231,138293..138393,138469..138572,138652..138773,138871..139030,139105..139189,139284..139365,139497..139613,139801..140079,140402..140560,140654..141253,141533..141627,141705..141856,141956..142065,142164..142235,142386..142451,142551..142580,142767..>142796))	Acanthamoeba castellanii str. Neff	14915037
ACA1_381090	mRNA	ACA1_381090	NW_004457363.1	143329	144198	R	ACA1_381090	complement(<143329..>144198)	Acanthamoeba castellanii str. Neff	14915038
ACA1_381100	mRNA	ACA1_381100	NW_004457363.1	144554	145392	D	ACA1_381100	join(<144554..144628,144685..144775,144815..145073,145164..145189,145235..>145392)	Acanthamoeba castellanii str. Neff	14915004
ACA1_381110	mRNA	ACA1_381110	NW_004457363.1	145505	147305	D	ACA1_381110	join(<145505..145564,145702..145903,146097..146242,146350..146408,146505..146638,146712..146813,147112..>147305)	Acanthamoeba castellanii str. Neff	14915005
ACA1_381120	mRNA	ACA1_381120	NW_004457363.1	147316	148169	D	ACA1_381120	join(<147316..147566,147613..147842,147925..>148169)	Acanthamoeba castellanii str. Neff	14915006
ACA1_381230	mRNA	ACA1_381230	NW_004457363.1	153181	153935	D	ACA1_381230	join(<153181..153556,153793..>153935)	Acanthamoeba castellanii str. Neff	14915007
ACA1_381240	mRNA	ACA1_381240	NW_004457363.1	154545	154874	R	ACA1_381240	complement(<154545..>154874)	Acanthamoeba castellanii str. Neff	14915008
ACA1_381250	mRNA	ACA1_381250	NW_004457363.1	155108	156328	D	ACA1_381250	join(<155108..155526,155616..155676,155801..>156328)	Acanthamoeba castellanii str. Neff	14915009
ACA1_381260	mRNA	ACA1_381260	NW_004457363.1	156532	157053	R	ACA1_381260	complement(join(<156532..156899,156981..>157053))	Acanthamoeba castellanii str. Neff	14915010
ACA1_381270	mRNA	ACA1_381270	NW_004457363.1	157719	158185	D	ACA1_381270	join(<157719..157851,157932..>158185)	Acanthamoeba castellanii str. Neff	14915011
ACA1_381380	mRNA	ACA1_381380	NW_004457363.1	159718	160798	D	ACA1_381380	join(<159718..159823,159917..160070,160166..160206,160431..>160798)	Acanthamoeba castellanii str. Neff	14915012
ACA1_381490	mRNA	ACA1_381490	NW_004457363.1	160802	163268	R	ACA1_381490	complement(join(<160802..160894,160975..161153,161164..161201,161309..161429,161539..161614,161698..161751,161862..161954,162058..162081,162178..162275,162355..162413,162688..162816,163010..163148,163226..>163268))	Acanthamoeba castellanii str. Neff	14915013
ACA1_381500	mRNA	ACA1_381500	NW_004457363.1	163926	164951	R	ACA1_381500	complement(<163926..>164951)	Acanthamoeba castellanii str. Neff	14915014
ACA1_381510	mRNA	ACA1_381510	NW_004457363.1	166073	168558	D	ACA1_381510	join(<166073..166178,166270..166423,166518..166558,166648..166732,166811..166920,167024..167057,167140..167333,167512..167682,167753..167822,167919..167975,168044..168193,168309..>168558)	Acanthamoeba castellanii str. Neff	14915015
ACA1_381520	mRNA	ACA1_381520	NW_004457363.1	168693	171111	D	ACA1_381520	join(<168693..168764,168933..169055,169146..169268,169371..169404,169478..169565,169675..169819,169897..169971,170084..170681,170694..170795,170894..170998,171065..>171111)	Acanthamoeba castellanii str. Neff	14915016
ACA1_381530	mRNA	ACA1_381530	NW_004457363.1	171501	177294	D	ACA1_381530	join(<171501..173121,173171..173221,173284..173341,173412..173478,173565..173694,173764..173867,173948..174028,174111..174236,174306..174420,174534..174634,174747..174917,175002..175124,175197..175374,175454..175648,175721..175818,175902..175961,176049..176132,176233..176302,176456..176546,176649..176777,176918..177033,177185..>177294)	Acanthamoeba castellanii str. Neff	14915017
ACA1_381540	mRNA	ACA1_381540	NW_004457363.1	177384	177815	D	ACA1_381540	join(<177384..177411,177569..177629,177707..>177815)	Acanthamoeba castellanii str. Neff	14915018
ACA1_381550	mRNA	ACA1_381550	NW_004457363.1	178076	179773	R	ACA1_381550	complement(join(<178076..178116,178430..178656,178720..178863,178946..179118,179199..179393,179487..179678,179744..>179773))	Acanthamoeba castellanii str. Neff	14915019
ACA1_381560	mRNA	ACA1_381560	NW_004457363.1	180419	180674	R	ACA1_381560	complement(join(<180419..180509,180538..>180674))	Acanthamoeba castellanii str. Neff	14915020
ACA1_381570	mRNA	ACA1_381570	NW_004457363.1	181937	184676	D	ACA1_381570	join(<181937..182113,182223..182388,182508..182841,182932..183103,183196..183636,183713..183849,184002..184138,184205..184324,184416..184501,184560..>184676)	Acanthamoeba castellanii str. Neff	14915021
ACA1_381580	mRNA	ACA1_381580	NW_004457363.1	185177	186481	D	ACA1_381580	join(<185177..185322,185413..185614,185700..185778,185822..186079,186137..186226,186309..>186481)	Acanthamoeba castellanii str. Neff	14915022
ACA1_381590	mRNA	ACA1_381590	NW_004457363.1	186584	190159	D	ACA1_381590	join(<186584..187049,187161..187266,187360..187425,187514..187599,187701..187872,187943..188153,188257..188800,188889..188969,189041..189131,189365..189551,189630..189888,189978..>190159)	Acanthamoeba castellanii str. Neff	14915023
ACA1_381600	mRNA	ACA1_381600	NW_004457363.1	190300	194683	D	ACA1_381600	join(<190300..190564,190655..190809,190958..191140,191280..191394,191480..191610,191682..191813,191967..192026,192148..192210,192302..192386,192487..192607,192699..192837,192925..193077,193175..193323,193477..193569,193684..193812,193898..193968,194069..194189,194268..194383,194481..>194683)	Acanthamoeba castellanii str. Neff	14915024
ACA1_381610	mRNA	ACA1_381610	NW_004457363.1	194828	196685	R	ACA1_381610	complement(join(<194828..194955,195064..195178,195321..195386,195483..195579,195712..195964,196063..196204,196338..196511,196629..>196685))	Acanthamoeba castellanii str. Neff	14915025
ACA1_381620	mRNA	ACA1_381620	NW_004457363.1	196913	199270	D	ACA1_381620	join(<196913..197012,197119..197265,197375..197442,197569..197660,197748..197791,197871..197929,198052..198143,198218..198373,198473..198650,198778..198936,199124..>199270)	Acanthamoeba castellanii str. Neff	14915026
ACA1_381640	mRNA	ACA1_381640	NW_004457363.1	201171	203266	D	ACA1_381640	join(<201171..201249,201315..201443,201566..202051,202133..202485,202850..>203266)	Acanthamoeba castellanii str. Neff	14914977
ACA1_381750	mRNA	ACA1_381750	NW_004457363.1	203307	204914	R	ACA1_381750	complement(join(<203307..203440,203514..203670,203756..203832,203854..203995,204089..204154,204258..204418,204495..204547,204621..204693,204782..>204914))	Acanthamoeba castellanii str. Neff	14914978
ACA1_381860	mRNA	ACA1_381860	NW_004457363.1	208660	210002	D	ACA1_381860	join(<208660..208869,209651..209756,209857..>210002)	Acanthamoeba castellanii str. Neff	14914979
ACA1_381980	mRNA	ACA1_381980	NW_004457363.1	210671	210970	D	ACA1_381980	join(<210671..210782,210867..>210970)	Acanthamoeba castellanii str. Neff	14914981
ACA1_303720	mRNA	ACA1_303720	NW_004457362.1	655	1486	R	ACA1_303720	complement(join(<655..933,1006..1091,1156..>1486))	Acanthamoeba castellanii str. Neff	14914960
ACA1_303730	mRNA	ACA1_303730	NW_004457362.1	4466	5595	D	ACA1_303730	join(<4466..4807,4883..5005,5259..5333,5413..>5595)	Acanthamoeba castellanii str. Neff	14914958
ACA1_303740	mRNA	ACA1_303740	NW_004457362.1	7657	8536	D	ACA1_303740	join(<7657..8283,8459..>8536)	Acanthamoeba castellanii str. Neff	14914956
ACA1_304050	mRNA	ACA1_304050	NW_004457362.1	25449	25926	D	ACA1_304050	join(<25449..25663,25746..>25926)	Acanthamoeba castellanii str. Neff	14914957
ACA1_304060	mRNA	ACA1_304060	NW_004457362.1	25948	26805	D	ACA1_304060	<25948..>26805	Acanthamoeba castellanii str. Neff	14914959
ACA1_344030	mRNA	ACA1_344030	NW_004457361.1	6465	11571	R	ACA1_344030	complement(join(<6465..6672,6918..7146,7224..7350,7441..7491,11322..11340,11420..>11571))	Acanthamoeba castellanii str. Neff	14914953
ACA1_344140	mRNA	ACA1_344140	NW_004457361.1	12090	12605	R	ACA1_344140	complement(<12090..>12605)	Acanthamoeba castellanii str. Neff	14914955
ACA1_344150	mRNA	ACA1_344150	NW_004457361.1	13880	14380	R	ACA1_344150	complement(join(<13880..13977,14095..14238,14329..>14380))	Acanthamoeba castellanii str. Neff	14914954
ACA1_017740	mRNA	ACA1_017740	NW_004457360.1	674	7831	D	ACA1_017740	join(<674..830,1018..1127,1222..1365,1444..1581,1656..1736,1852..1969,2061..2173,2283..2424,2524..2622,2703..3086,3197..3318,3436..3492,3567..3645,3742..3904,4011..4178,4298..4383,4453..4568,4642..4707,4790..4876,4990..5088,5181..5375,5421..5492,5622..5900,6014..6076,6170..6253,6405..6912,7001..7199,7290..7389,7506..7593,7683..>7831)	Acanthamoeba castellanii str. Neff	14914948
ACA1_017750	mRNA	ACA1_017750	NW_004457360.1	9615	10598	D	ACA1_017750	<9615..>10598	Acanthamoeba castellanii str. Neff	14914952
ACA1_017760	mRNA	ACA1_017760	NW_004457360.1	11160	11473	D	ACA1_017760	join(<11160..11187,11225..11366,11407..>11473)	Acanthamoeba castellanii str. Neff	14914949
ACA1_017770	mRNA	ACA1_017770	NW_004457360.1	11646	14403	D	ACA1_017770	join(<11646..11720,11813..12415,12507..12600,12669..12914,12999..13382,13451..13537,13626..13768,13860..14025,14093..>14403)	Acanthamoeba castellanii str. Neff	14914950
ACA1_017780	mRNA	ACA1_017780	NW_004457360.1	14497	14919	R	ACA1_017780	complement(<14497..>14919)	Acanthamoeba castellanii str. Neff	14914951
ACA1_333700	mRNA	ACA1_333700	NW_004457359.1	192	632	R	ACA1_333700	complement(<192..>632)	Acanthamoeba castellanii str. Neff	14914937
ACA1_333710	mRNA	ACA1_333710	NW_004457359.1	2762	3503	R	ACA1_333710	complement(join(<2762..3033,3118..3229,3303..>3503))	Acanthamoeba castellanii str. Neff	14914933
ACA1_333720	mRNA	ACA1_333720	NW_004457359.1	3779	4249	D	ACA1_333720	join(<3779..3802,3902..>4249)	Acanthamoeba castellanii str. Neff	14914934
ACA1_333830	mRNA	ACA1_333830	NW_004457359.1	6232	6838	R	ACA1_333830	complement(join(<6232..6415,6451..6550,6656..>6838))	Acanthamoeba castellanii str. Neff	14914935
ACA1_333840	mRNA	ACA1_333840	NW_004457359.1	7021	10522	D	ACA1_333840	join(<7021..7059,7484..7930,8037..8223,8319..8500,8574..8632,8756..8885,8983..9102,9180..9306,9397..9525,9586..9710,9859..9987,10077..10154,10251..10291,10387..>10522)	Acanthamoeba castellanii str. Neff	14914936
ACA1_333950	mRNA	ACA1_333950	NW_004457359.1	12301	14101	D	ACA1_333950	join(<12301..12582,12625..12734,12795..12938,13059..13080,13153..13229,13308..13422,13458..13535,13609..13724,13794..13867,13956..>14101)	Acanthamoeba castellanii str. Neff	14914938
ACA1_333960	mRNA	ACA1_333960	NW_004457359.1	14880	16731	D	ACA1_333960	join(<14880..15040,15196..15515,15563..15648,15765..15844,15946..16296,16378..16586,16679..>16731)	Acanthamoeba castellanii str. Neff	14914939
ACA1_334070	mRNA	ACA1_334070	NW_004457359.1	17485	19502	D	ACA1_334070	join(<17485..17604,17731..17816,17935..18148,18276..18404,18513..18594,18727..18824,18943..19111,19196..19271,19379..>19502)	Acanthamoeba castellanii str. Neff	14914940
ACA1_334080	mRNA	ACA1_334080	NW_004457359.1	19922	20113	R	ACA1_334080	complement(<19922..>20113)	Acanthamoeba castellanii str. Neff	14914941
ACA1_334100	mRNA	ACA1_334100	NW_004457359.1	21851	22204	D	ACA1_334100	join(<21851..22118,22197..>22204)	Acanthamoeba castellanii str. Neff	14914943
ACA1_334110	mRNA	ACA1_334110	NW_004457359.1	24425	26233	D	ACA1_334110	join(<24425..24749,24856..25000,25184..25265,25462..25569,25851..25980,26091..>26233)	Acanthamoeba castellanii str. Neff	14914944
ACA1_334220	mRNA	ACA1_334220	NW_004457359.1	27260	31293	D	ACA1_334220	join(<27260..27347,27485..28347,28424..28483,28551..28661,30033..30091,30199..30337,30443..30504,30603..>31293)	Acanthamoeba castellanii str. Neff	14914945
ACA1_334430	mRNA	ACA1_334430	NW_004457359.1	32027	32382	D	ACA1_334430	join(<32027..32096,32202..32315,32369..>32382)	Acanthamoeba castellanii str. Neff	14914946
ACA1_354700	mRNA	ACA1_354700	NW_004457358.1	298	1303	R	ACA1_354700	complement(join(<298..485,603..693,854..>1303))	Acanthamoeba castellanii str. Neff	14914931
ACA1_354810	mRNA	ACA1_354810	NW_004457358.1	8175	8315	D	ACA1_354810	<8175..>8315	Acanthamoeba castellanii str. Neff	14914929
ACA1_354920	mRNA	ACA1_354920	NW_004457358.1	13547	14394	D	ACA1_354920	join(<13547..13603,13689..13889,13962..14075,14162..14266,14350..>14394)	Acanthamoeba castellanii str. Neff	14914932
ACA1_355030	mRNA	ACA1_355030	NW_004457358.1	19769	20256	D	ACA1_355030	join(<19769..19949,20048..>20256)	Acanthamoeba castellanii str. Neff	14914930
ACA1_101790	mRNA	ACA1_101790	NW_004457357.1	45	419	D	ACA1_101790	join(<45..180,265..>419)	Acanthamoeba castellanii str. Neff	14914927
ACA1_102100	mRNA	ACA1_102100	NW_004457357.1	10030	10424	D	ACA1_102100	join(<10030..10158,10305..>10424)	Acanthamoeba castellanii str. Neff	14914928
ACA1_102220	mRNA	ACA1_102220	NW_004457357.1	18814	19398	D	ACA1_102220	join(<18814..18861,18947..19013,19084..19198,19302..>19398)	Acanthamoeba castellanii str. Neff	14914926
ACA1_105730	mRNA	ACA1_105730	NW_004457356.1	157	458	D	ACA1_105730	join(<157..279,357..>458)	Acanthamoeba castellanii str. Neff	14914893
ACA1_105740	mRNA	ACA1_105740	NW_004457356.1	1458	4000	D	ACA1_105740	join(<1458..1583,1714..1811,1905..2042,2151..2193,2285..2402,2481..2601,2712..2854,2982..3051,3195..3254,3367..3597,3683..3827,3962..>4000)	Acanthamoeba castellanii str. Neff	14914900
ACA1_105750	mRNA	ACA1_105750	NW_004457356.1	6319	7064	D	ACA1_105750	join(<6319..6384,6498..>7064)	Acanthamoeba castellanii str. Neff	14914897
ACA1_105760	mRNA	ACA1_105760	NW_004457356.1	7317	10798	R	ACA1_105760	complement(join(<7317..7411,7482..7715,7795..8077,8147..8243,8278..8509,8601..9119,9189..9356,9429..9568,9647..10027,10105..10232,10376..10597,10691..>10798))	Acanthamoeba castellanii str. Neff	14914898
ACA1_105770	mRNA	ACA1_105770	NW_004457356.1	11217	16232	D	ACA1_105770	join(<11217..11334,11428..11582,11732..12857,12942..13123,13206..13327,13436..13603,13715..13826,13963..14101,14236..14390,14476..14549,14647..14719,14798..14878,15034..15141,15282..15353,15437..15479,15602..15706,15815..15927,16035..>16232)	Acanthamoeba castellanii str. Neff	14914899
ACA1_105780	mRNA	ACA1_105780	NW_004457356.1	16454	18733	R	ACA1_105780	complement(join(<16454..16599,16698..16906,17029..17137,17229..17514,17660..18394,18480..18556,18688..>18733))	Acanthamoeba castellanii str. Neff	14914842
ACA1_105890	mRNA	ACA1_105890	NW_004457356.1	21943	24275	D	ACA1_105890	join(<21943..22041,22128..22297,22372..22609,22704..22727,22854..22941,23047..23174,23267..23435,23556..23808,23853..24135,24225..>24275)	Acanthamoeba castellanii str. Neff	14914843
ACA1_105900	mRNA	ACA1_105900	NW_004457356.1	24387	25204	R	ACA1_105900	complement(join(<24387..24460,24557..24619,24704..24823,24926..25017,25107..>25204))	Acanthamoeba castellanii str. Neff	14914844
ACA1_105910	mRNA	ACA1_105910	NW_004457356.1	25643	28301	R	ACA1_105910	complement(join(<25643..25921,26045..27829,27845..27917,28234..>28301))	Acanthamoeba castellanii str. Neff	14914845
ACA1_105920	mRNA	ACA1_105920	NW_004457356.1	29247	31061	R	ACA1_105920	complement(join(<29247..29290,29380..29460,29557..29631,29704..29784,29864..29938,30021..30098,30190..30282,30380..30445,30522..30642,30765..30895,30971..>31061))	Acanthamoeba castellanii str. Neff	14914846
ACA1_105930	mRNA	ACA1_105930	NW_004457356.1	31477	32578	R	ACA1_105930	complement(join(<31477..31816,31959..>32578))	Acanthamoeba castellanii str. Neff	14914847
ACA1_105940	mRNA	ACA1_105940	NW_004457356.1	32788	35884	D	ACA1_105940	join(<32788..32861,32926..33046,33238..33341,33412..33570,33650..33720,33813..33928,33997..35223,35234..>35884)	Acanthamoeba castellanii str. Neff	14914848
ACA1_105950	mRNA	ACA1_105950	NW_004457356.1	36846	37289	D	ACA1_105950	<36846..>37289	Acanthamoeba castellanii str. Neff	14914849
ACA1_105960	mRNA	ACA1_105960	NW_004457356.1	37432	39645	R	ACA1_105960	complement(join(<37432..37538,37616..37733,37841..37894,37999..38064,38160..38255,38550..38641,38735..38930,39049..39178,39237..39468,39579..>39645))	Acanthamoeba castellanii str. Neff	14914850
ACA1_105970	mRNA	ACA1_105970	NW_004457356.1	40026	41624	R	ACA1_105970	complement(join(<40026..40062,40170..40299,40438..40538,40616..40743,40967..40985,41002..41110,41205..41331,41473..41562,41577..>41624))	Acanthamoeba castellanii str. Neff	14914851
ACA1_105980	mRNA	ACA1_105980	NW_004457356.1	41915	42296	D	ACA1_105980	join(<41915..42005,42073..>42296)	Acanthamoeba castellanii str. Neff	14914852
ACA1_105990	mRNA	ACA1_105990	NW_004457356.1	42364	46664	D	ACA1_105990	join(<42364..42392,42418..42667,42791..42956,43149..43229,43318..43378,43498..43585,43674..43784,43871..43946,44029..44136,44203..44375,44477..44598,44666..44832,44913..44991,45097..45548,45658..45889,45979..46122,46255..46346,46459..>46664)	Acanthamoeba castellanii str. Neff	14914853
ACA1_106000	mRNA	ACA1_106000	NW_004457356.1	47068	53922	D	ACA1_106000	join(<47068..47211,47328..47459,47593..47755,47853..48004,48078..48176,48255..48440,48564..48791,48902..48997,49141..49476,49566..49853,49933..50115,50235..50405,50479..50634,50729..50946,51064..51157,51283..51450,51539..51730,51877..52162,52285..52967,53059..>53922)	Acanthamoeba castellanii str. Neff	14914854
ACA1_106010	mRNA	ACA1_106010	NW_004457356.1	54109	57499	D	ACA1_106010	join(<54109..54181,54245..54584,54670..55172,55222..55248,55272..55553,55665..55802,55909..56105,56219..56422,56518..56700,56818..57018,57117..57243,57342..>57499)	Acanthamoeba castellanii str. Neff	14914874
ACA1_106020	mRNA	ACA1_106020	NW_004457356.1	57738	59309	D	ACA1_106020	join(<57738..58175,58320..58453,58610..58733,58816..58896,58959..>59309)	Acanthamoeba castellanii str. Neff	14914875
ACA1_106030	mRNA	ACA1_106030	NW_004457356.1	59988	61418	R	ACA1_106030	complement(join(<59988..60126,60251..60315,60409..60549,60685..60808,60910..61027,61184..>61418))	Acanthamoeba castellanii str. Neff	14914876
ACA1_106140	mRNA	ACA1_106140	NW_004457356.1	61602	62370	D	ACA1_106140	join(<61602..61667,61794..62120,62248..>62370)	Acanthamoeba castellanii str. Neff	14914877
ACA1_106150	mRNA	ACA1_106150	NW_004457356.1	62751	64942	R	ACA1_106150	complement(join(<62751..62776,62931..63085,63221..63293,63401..63599,63720..63798,63940..64058,64143..64199,64313..64426,64563..64746,64854..>64942))	Acanthamoeba castellanii str. Neff	14914878
ACA1_106260	mRNA	ACA1_106260	NW_004457356.1	65382	66524	R	ACA1_106260	complement(join(<65382..65525,65607..65728,65847..65934,66067..66235,66316..>66524))	Acanthamoeba castellanii str. Neff	14914879
ACA1_106270	mRNA	ACA1_106270	NW_004457356.1	66648	67858	R	ACA1_106270	complement(join(<66648..67052,67127..67312,67408..67485,67558..67639,67680..67717,67766..>67858))	Acanthamoeba castellanii str. Neff	14914880
ACA1_106280	mRNA	ACA1_106280	NW_004457356.1	68632	69362	R	ACA1_106280	complement(join(<68632..68670,68789..68813,68941..69101,69112..69214,69286..>69362))	Acanthamoeba castellanii str. Neff	14914881
ACA1_106290	mRNA	ACA1_106290	NW_004457356.1	69499	77804	D	ACA1_106290	join(<69499..69522,69659..69778,69894..69956,70041..70274,70395..70501,70604..70735,70746..70840,70965..71089,71202..71813,71982..72161,72260..72437,72510..73098,73194..73833,73882..74037,74124..74370,74459..74879,74963..75232,75360..76266,76306..76341,76494..76595,76710..76899,76972..77063,77079..>77804)	Acanthamoeba castellanii str. Neff	14914882
ACA1_106300	mRNA	ACA1_106300	NW_004457356.1	78059	82433	D	ACA1_106300	join(<78059..78190,78483..78604,78759..78847,78963..79037,79166..79296,79436..79571,79671..79976,80062..80137,80265..80397,80518..80710,80808..80933,81036..81095,81179..81249,81277..81330,81430..81856,81964..82053,82174..>82433)	Acanthamoeba castellanii str. Neff	14914883
ACA1_106310	mRNA	ACA1_106310	NW_004457356.1	82706	83238	D	ACA1_106310	join(<82706..82954,83194..>83238)	Acanthamoeba castellanii str. Neff	14914884
ACA1_106320	mRNA	ACA1_106320	NW_004457356.1	83482	85154	D	ACA1_106320	join(<83482..83973,84016..84473,84596..84647,84705..>85154)	Acanthamoeba castellanii str. Neff	14914885
ACA1_106330	mRNA	ACA1_106330	NW_004457356.1	85327	88340	R	ACA1_106330	complement(join(<85327..85538,85650..85756,85837..85979,86150..86277,86364..86439,86552..86649,86748..86918,87072..87229,87414..87750,87870..88070,88154..>88340))	Acanthamoeba castellanii str. Neff	14914886
ACA1_106340	mRNA	ACA1_106340	NW_004457356.1	88919	90536	R	ACA1_106340	complement(join(<88919..89083,89165..89360,89484..89926,90029..90203,90328..>90536))	Acanthamoeba castellanii str. Neff	14914887
ACA1_106350	mRNA	ACA1_106350	NW_004457356.1	90642	93476	D	ACA1_106350	join(<90642..90669,90766..90836,90882..91121,91157..91207,91243..91302,91397..91515,91619..91676,91784..92202,92328..92513,92533..92597,92692..92744,92873..93199,93363..>93476)	Acanthamoeba castellanii str. Neff	14914888
ACA1_106360	mRNA	ACA1_106360	NW_004457356.1	92957	93575	R	ACA1_106360	complement(join(<92957..93218,93346..>93575))	Acanthamoeba castellanii str. Neff	14914889
ACA1_106370	mRNA	ACA1_106370	NW_004457356.1	93743	95627	D	ACA1_106370	join(<93743..94108,94172..94239,94441..94497,94572..94672,94793..94835,94906..94968,95067..95232,95351..95447,95482..>95627)	Acanthamoeba castellanii str. Neff	14914890
ACA1_106380	mRNA	ACA1_106380	NW_004457356.1	95899	97616	D	ACA1_106380	join(<95899..96022,96127..96213,96305..96387,96475..96615,96733..96804,96933..97062,97230..97525,97593..>97616)	Acanthamoeba castellanii str. Neff	14914891
ACA1_106590	mRNA	ACA1_106590	NW_004457356.1	98779	100216	D	ACA1_106590	join(<98779..98902,99035..99176,99271..99453,99562..99722,100020..>100216)	Acanthamoeba castellanii str. Neff	14914892
ACA1_106600	mRNA	ACA1_106600	NW_004457356.1	100497	106098	R	ACA1_106600	complement(join(<100497..100537,100627..100772,100917..101006,101137..101219,101630..101765,101917..102009,102270..102358,102744..102827,102946..103056,103144..103308,103428..103582,103798..103864,104054..104332,104565..104656,104780..104967,105096..105190,105376..105756,105916..>106098))	Acanthamoeba castellanii str. Neff	14914913
ACA1_106710	mRNA	ACA1_106710	NW_004457356.1	106242	108655	D	ACA1_106710	join(<106242..106318,106450..106517,106630..106714,106945..107074,107205..107322,107458..107503,107627..107797,107959..108088,108232..108374,108550..>108655)	Acanthamoeba castellanii str. Neff	14914914
ACA1_106720	mRNA	ACA1_106720	NW_004457356.1	108979	111237	R	ACA1_106720	complement(join(<108979..109021,109194..109333,109670..109896,110062..110239,110432..110588,110734..110842,110957..111034,111165..>111237))	Acanthamoeba castellanii str. Neff	14914915
ACA1_106730	mRNA	ACA1_106730	NW_004457356.1	111635	112167	D	ACA1_106730	join(<111635..111998,112109..>112167)	Acanthamoeba castellanii str. Neff	14914916
ACA1_106740	mRNA	ACA1_106740	NW_004457356.1	112377	113459	D	ACA1_106740	join(<112377..112566,112693..112770,112798..112971,113124..113292,113429..>113459)	Acanthamoeba castellanii str. Neff	14914917
ACA1_106750	mRNA	ACA1_106750	NW_004457356.1	113726	116586	D	ACA1_106750	join(<113726..113857,114182..114350,114536..114724,114869..114925,114981..115059,115234..115395,115552..115601,115707..115907,115996..116073,116185..116343,116441..>116586)	Acanthamoeba castellanii str. Neff	14914918
ACA1_106760	mRNA	ACA1_106760	NW_004457356.1	116766	118087	R	ACA1_106760	complement(join(<116766..116951,117047..117194,117289..117410,117493..117678,117875..117973,118058..>118087))	Acanthamoeba castellanii str. Neff	14914919
ACA1_106770	mRNA	ACA1_106770	NW_004457356.1	118329	118880	R	ACA1_106770	complement(join(<118329..118404,118435..>118880))	Acanthamoeba castellanii str. Neff	14914920
ACA1_106780	mRNA	ACA1_106780	NW_004457356.1	125094	127531	R	ACA1_106780	complement(join(<125094..125230,125328..125462,125560..125626,125701..125796,125883..125990,126135..126225,126316..126376,126465..126562,126679..126780,126896..126942,127068..127222,127408..>127531))	Acanthamoeba castellanii str. Neff	14914921
ACA1_106790	mRNA	ACA1_106790	NW_004457356.1	128241	128656	R	ACA1_106790	complement(join(<128241..128426,128558..>128656))	Acanthamoeba castellanii str. Neff	14914922
ACA1_106800	mRNA	ACA1_106800	NW_004457356.1	129327	135235	D	ACA1_106800	join(<129327..129435,129503..129626,129794..129869,129963..130064,130317..130471,130568..130682,130855..131037,131179..131376,131531..131857,132039..132160,132280..132481,132636..132767,132881..133024,133131..133256,133426..133536,133693..134113,134218..134310,134399..134472,134540..134623,134708..134786,134867..134991,135098..>135235)	Acanthamoeba castellanii str. Neff	14914923
ACA1_106810	mRNA	ACA1_106810	NW_004457356.1	135376	139219	R	ACA1_106810	complement(join(<135376..135529,135616..135709,135787..135862,136004..136043,136153..136273,136779..136828,136862..137022,137140..137253,137470..137557,137645..137693,137844..137952,138124..138413,138523..138594,138724..138760,138895..139030,139149..>139219))	Acanthamoeba castellanii str. Neff	14914924
ACA1_106820	mRNA	ACA1_106820	NW_004457356.1	139572	141932	R	ACA1_106820	complement(join(<139572..139634,139794..139958,140114..140331,140545..140689,140834..140992,141149..141204,141303..141431,141589..141682,141879..>141932))	Acanthamoeba castellanii str. Neff	14914855
ACA1_106830	mRNA	ACA1_106830	NW_004457356.1	147684	148313	D	ACA1_106830	<147684..>148313	Acanthamoeba castellanii str. Neff	14914856
ACA1_106940	mRNA	ACA1_106940	NW_004457356.1	150807	152513	R	ACA1_106940	complement(join(<150807..151024,151154..151224,151353..151514,151634..151761,151880..151955,152107..>152513))	Acanthamoeba castellanii str. Neff	14914857
ACA1_106950	mRNA	ACA1_106950	NW_004457356.1	152835	157430	D	ACA1_106950	join(<152835..152991,153171..153385,153519..153590,153775..153880,154118..154162,154221..154312,154327..154488,154859..155025,155143..155222,155391..155524,156386..156501,156667..156762,156921..157034,157211..>157430)	Acanthamoeba castellanii str. Neff	14914858
ACA1_107160	mRNA	ACA1_107160	NW_004457356.1	157643	163908	D	ACA1_107160	join(<157643..157873,157971..158109,158240..158305,158418..158503,158641..158766,158895..159011,159103..159183,159344..159431,159629..159729,159891..160015,160132..160306,160438..160504,160679..160809,160914..160983,161112..161296,161455..161645,161784..161910,162066..162150,162191..162267,162806..162916,163177..>163908)	Acanthamoeba castellanii str. Neff	14914859
ACA1_107270	mRNA	ACA1_107270	NW_004457356.1	163987	173963	R	ACA1_107270	complement(join(<163987..164358,164530..164682,164860..164958,165081..165199,165311..165716,165911..165979,166068..166213,166393..166503,166623..166714,166794..167095,167249..167346,167443..167627,167731..167816,167914..168018,168265..168331,168580..168692,169332..169385,169537..169642,169784..169863,169973..170092,170220..170303,170403..170528,170629..170729,170864..171091,171199..171358,171480..171617,171729..171902,172013..172109,172171..172364,172438..172494,172656..172783,172887..173088,173148..173209,173365..173427,173852..>173963))	Acanthamoeba castellanii str. Neff	14914860
ACA1_107380	mRNA	ACA1_107380	NW_004457356.1	174187	180367	R	ACA1_107380	complement(join(<174187..174377,174487..174508,174786..174899,174924..175001,175082..175134,175229..175349,175425..175517,175593..175730,175828..176070,176145..176252,176337..176532,176644..176725,176833..176937,177030..177093,177174..177283,177388..177609,177704..177812,177926..178198,178271..178361,178481..178599,178665..178830,178959..179124,179249..179320,179395..179477,179989..180022,180241..>180367))	Acanthamoeba castellanii str. Neff	14914861
ACA1_107390	mRNA	ACA1_107390	NW_004457356.1	180637	183232	R	ACA1_107390	complement(join(<180637..180807,181105..181198,181275..181380,181527..181653,181787..181965,182051..182213,182280..182386,182467..182545,182609..182884,182899..183002,183109..>183232))	Acanthamoeba castellanii str. Neff	14914862
ACA1_107400	mRNA	ACA1_107400	NW_004457356.1	183307	184692	R	ACA1_107400	complement(join(<183307..183381,183406..183536,183733..183825,183906..183963,184071..184195,184282..184498,184609..>184692))	Acanthamoeba castellanii str. Neff	14914863
ACA1_107410	mRNA	ACA1_107410	NW_004457356.1	185654	187056	D	ACA1_107410	join(<185654..185856,185972..186036,186114..186158,186227..186328,186424..186559,186689..186842,186982..>187056)	Acanthamoeba castellanii str. Neff	14914864
ACA1_107420	mRNA	ACA1_107420	NW_004457356.1	187541	191610	D	ACA1_107420	join(<187541..187654,187714..188656,188754..189013,189124..189231,189313..189408,189478..189642,189762..189906,189994..190242,190349..190424,190506..>191610)	Acanthamoeba castellanii str. Neff	14914865
ACA1_107430	mRNA	ACA1_107430	NW_004457356.1	192269	195975	D	ACA1_107430	join(<192269..192474,192648..193382,193475..193544,193680..193900,193987..194059,194139..194195,194292..194330,194443..>195975)	Acanthamoeba castellanii str. Neff	14914866
ACA1_107440	mRNA	ACA1_107440	NW_004457356.1	196354	198679	D	ACA1_107440	join(<196354..196378,196569..196719,196825..196924,197026..197117,197263..197363,197509..197703,197818..197971,198099..198191,198293..198377,198488..>198679)	Acanthamoeba castellanii str. Neff	14914867
ACA1_107450	mRNA	ACA1_107450	NW_004457356.1	199194	201160	R	ACA1_107450	complement(join(<199194..199524,199621..199711,199785..199857,199983..200194,200331..200422,200532..>201160))	Acanthamoeba castellanii str. Neff	14914868
ACA1_107460	mRNA	ACA1_107460	NW_004457356.1	201462	202854	R	ACA1_107460	complement(join(<201462..201968,202025..202291,202377..202445,202681..>202854))	Acanthamoeba castellanii str. Neff	14914869
ACA1_107470	mRNA	ACA1_107470	NW_004457356.1	203040	203374	R	ACA1_107470	complement(join(<203040..203179,203239..>203374))	Acanthamoeba castellanii str. Neff	14914870
ACA1_107480	mRNA	ACA1_107480	NW_004457356.1	204387	207186	D	ACA1_107480	join(<204387..204507,204605..204729,204813..204898,204983..205160,205290..205352,205470..205556,205677..205779,205865..206043,206137..206215,206339..206473,206551..206692,206770..206843,206957..>207186)	Acanthamoeba castellanii str. Neff	14914871
ACA1_107490	mRNA	ACA1_107490	NW_004457356.1	207521	207919	R	ACA1_107490	complement(<207521..>207919)	Acanthamoeba castellanii str. Neff	14914872
ACA1_107500	mRNA	ACA1_107500	NW_004457356.1	209074	209885	R	ACA1_107500	complement(join(<209074..209201,209309..209368,209474..209619,209733..209762,209785..>209885))	Acanthamoeba castellanii str. Neff	14914873
ACA1_107510	mRNA	ACA1_107510	NW_004457356.1	210324	212259	D	ACA1_107510	join(<210324..210371,210470..210562,210702..210785,210874..211023,211123..211256,211414..211453,211545..211658,211761..211847,211969..>212259)	Acanthamoeba castellanii str. Neff	14914901
ACA1_107520	mRNA	ACA1_107520	NW_004457356.1	212485	215240	D	ACA1_107520	join(<212485..212533,212658..212769,212963..213090,213208..>215240)	Acanthamoeba castellanii str. Neff	14914902
ACA1_107530	mRNA	ACA1_107530	NW_004457356.1	215333	216561	R	ACA1_107530	complement(join(<215333..215407,215509..215648,215771..215836,215932..216036,216161..216299,216403..>216561))	Acanthamoeba castellanii str. Neff	14914903
ACA1_107540	mRNA	ACA1_107540	NW_004457356.1	216826	218351	D	ACA1_107540	join(<216826..216985,217106..217260,217403..217615,217706..217931,218002..218088,218182..>218351)	Acanthamoeba castellanii str. Neff	14914904
ACA1_107550	mRNA	ACA1_107550	NW_004457356.1	218440	221297	R	ACA1_107550	complement(join(<218440..218651,218740..218904,219051..219162,219251..219345,219482..219625,219750..219858,219966..220070,220204..220232,220339..220368,220550..220637,220726..220839,220928..221039,221140..221213,221289..>221297))	Acanthamoeba castellanii str. Neff	14914905
ACA1_107560	mRNA	ACA1_107560	NW_004457356.1	221995	223062	R	ACA1_107560	complement(join(<221995..222036,222109..222201,222324..222469,222663..>223062))	Acanthamoeba castellanii str. Neff	14914906
ACA1_107570	mRNA	ACA1_107570	NW_004457356.1	223511	224321	D	ACA1_107570	join(<223511..223571,223787..223853,223978..224073,224195..>224321)	Acanthamoeba castellanii str. Neff	14914907
ACA1_107580	mRNA	ACA1_107580	NW_004457356.1	224459	224905	R	ACA1_107580	complement(join(<224459..224581,224687..>224905))	Acanthamoeba castellanii str. Neff	14914908
ACA1_107590	mRNA	ACA1_107590	NW_004457356.1	225230	226506	D	ACA1_107590	join(<225230..225428,225540..225639,225731..225846,225941..226035,226122..226249,226386..>226506)	Acanthamoeba castellanii str. Neff	14914909
ACA1_107600	mRNA	ACA1_107600	NW_004457356.1	226716	228590	D	ACA1_107600	join(<226716..227057,227152..227465,227529..227603,227690..227772,227843..227927,228020..228159,228237..228325,228447..>228590)	Acanthamoeba castellanii str. Neff	14914910
ACA1_107610	mRNA	ACA1_107610	NW_004457356.1	229485	232224	D	ACA1_107610	join(<229485..229599,229708..229796,229876..229994,230111..230177,230247..230377,230471..230690,231279..231537,231606..231932,232016..>232224)	Acanthamoeba castellanii str. Neff	14914911
ACA1_107620	mRNA	ACA1_107620	NW_004457356.1	232552	233598	R	ACA1_107620	complement(join(<232552..232665,232691..232810,232896..233026,233358..>233598))	Acanthamoeba castellanii str. Neff	14914912
ACA1_107630	mRNA	ACA1_107630	NW_004457356.1	234658	236589	D	ACA1_107630	join(<234658..234995,235099..235163,235268..235338,235422..235506,235609..235791,235902..236046,236210..236310,236423..>236589)	Acanthamoeba castellanii str. Neff	14914894
ACA1_107640	mRNA	ACA1_107640	NW_004457356.1	237554	242619	D	ACA1_107640	join(<237554..238194,238289..238439,238541..238691,238902..239087,239159..239347,239435..240582,240655..240783,240896..241310,241514..241737,241859..241946,242022..242216,242345..242443,242531..>242619)	Acanthamoeba castellanii str. Neff	14914895
ACA1_107650	mRNA	ACA1_107650	NW_004457356.1	243059	244027	D	ACA1_107650	join(<243059..243148,243233..243378,243488..243699,243768..>244027)	Acanthamoeba castellanii str. Neff	14914896
ACA1_313720	mRNA	ACA1_313720	NW_004457355.1	821	1751	D	ACA1_313720	join(<821..1094,1167..1306,1401..>1751)	Acanthamoeba castellanii str. Neff	14914838
ACA1_313730	mRNA	ACA1_313730	NW_004457355.1	1902	4387	R	ACA1_313730	complement(join(<1902..2059,2153..2271,2366..2560,2647..2735,2832..3286,3399..3546,3645..3854,4058..>4387))	Acanthamoeba castellanii str. Neff	14914839
ACA1_313740	mRNA	ACA1_313740	NW_004457355.1	4656	7527	R	ACA1_313740	complement(join(<4656..4919,4992..5138,5217..5459,5544..5661,5752..5991,6076..6212,6380..6465,6558..7079,7425..>7527))	Acanthamoeba castellanii str. Neff	14914840
ACA1_313750	mRNA	ACA1_313750	NW_004457355.1	8269	11897	R	ACA1_313750	complement(join(<8269..8292,8379..8794,8874..9083,9152..9219,9294..9393,9486..9580,9665..9761,9864..9993,10083..10153,10257..10466,10503..10547,10646..10755,10828..10986,11080..11176,11260..11311,11407..11516,11604..11747,11822..>11897))	Acanthamoeba castellanii str. Neff	14914841
ACA1_006570	mRNA	ACA1_006570	NW_004457354.1	9929	10259	D	ACA1_006570	join(<9929..10047,10160..>10259)	Acanthamoeba castellanii str. Neff	14914837
ACA1_006580	mRNA	ACA1_006580	NW_004457354.1	10300	11694	R	ACA1_006580	complement(join(<10300..10377,10491..10566,10677..10924,11032..11075,11154..11258,11335..11465,11564..>11694))	Acanthamoeba castellanii str. Neff	14914836
ACA1_327370	mRNA	ACA1_327370	NW_004457353.1	4955	5491	D	ACA1_327370	join(<4955..5036,5135..5255,5284..5407,5438..>5491)	Acanthamoeba castellanii str. Neff	14914835
ACA1_327380	mRNA	ACA1_327380	NW_004457353.1	5834	7464	R	ACA1_327380	complement(join(<5834..6225,6357..6470,6542..6782,6872..7060,7135..>7464))	Acanthamoeba castellanii str. Neff	14914832
ACA1_327390	mRNA	ACA1_327390	NW_004457353.1	7686	8649	D	ACA1_327390	join(<7686..7816,7889..8070,8157..8217,8292..>8649)	Acanthamoeba castellanii str. Neff	14914833
ACA1_327400	mRNA	ACA1_327400	NW_004457353.1	9557	12035	R	ACA1_327400	complement(join(<9557..9963,10022..10139,10253..10400,10577..10710,10813..10929,11034..11246,11324..11481,11573..11662,11771..>12035))	Acanthamoeba castellanii str. Neff	14914834
ACA1_082120	mRNA	ACA1_082120	NW_004457352.1	1095	1615	D	ACA1_082120	join(<1095..1425,1443..>1615)	Acanthamoeba castellanii str. Neff	14914830
ACA1_082130	mRNA	ACA1_082130	NW_004457352.1	2681	4998	D	ACA1_082130	join(<2681..2773,2854..2925,3014..3053,3170..3615,3693..3907,4001..4518,4534..4610,4725..4812,4904..>4998)	Acanthamoeba castellanii str. Neff	14914824
ACA1_082140	mRNA	ACA1_082140	NW_004457352.1	5441	7691	D	ACA1_082140	join(<5441..5743,5818..5900,6028..6089,6261..6345,6453..6574,6811..6897,6978..7114,7196..7396,7497..>7691)	Acanthamoeba castellanii str. Neff	14914825
ACA1_082150	mRNA	ACA1_082150	NW_004457352.1	7768	14805	R	ACA1_082150	complement(join(<7768..8066,8142..8393,8488..8754,8833..8937,9004..9597,9683..9904,10008..10951,11118..11245,11319..11530,11596..11727,11831..11900,11969..12615,12865..13038,13122..13244,13316..13467,13559..13641,13710..13813,13908..14080,14167..14318,14406..14608,14667..>14805))	Acanthamoeba castellanii str. Neff	14914822
ACA1_082160	mRNA	ACA1_082160	NW_004457352.1	15072	17294	D	ACA1_082160	join(<15072..15133,15226..15370,15485..15593,15656..15710,15795..15913,16003..16142,16202..16354,16604..16694,16789..16897,16986..17152,17251..>17294)	Acanthamoeba castellanii str. Neff	14914823
ACA1_082170	mRNA	ACA1_082170	NW_004457352.1	17413	18745	R	ACA1_082170	complement(join(<17413..17684,17766..17913,18007..18197,18301..>18745))	Acanthamoeba castellanii str. Neff	14914819
ACA1_082180	mRNA	ACA1_082180	NW_004457352.1	19206	20974	D	ACA1_082180	join(<19206..19525,19618..19725,19816..19916,20025..20111,20194..20293,20461..>20974)	Acanthamoeba castellanii str. Neff	14914820
ACA1_082190	mRNA	ACA1_082190	NW_004457352.1	21016	24452	R	ACA1_082190	complement(join(<21016..22025,22156..22321,22423..22542,22651..22811,22879..23269,23346..23458,23538..23655,23737..23904,23969..24006,24108..24227,24323..>24452))	Acanthamoeba castellanii str. Neff	14914821
ACA1_082200	mRNA	ACA1_082200	NW_004457352.1	24532	27642	R	ACA1_082200	complement(join(<24532..24668,24733..24798,24914..24994,25075..25117,25202..25761,25840..25911,25999..26064,26179..26898,27000..27068,27152..27273,27551..>27642))	Acanthamoeba castellanii str. Neff	14914826
ACA1_082310	mRNA	ACA1_082310	NW_004457352.1	27530	27879	D	ACA1_082310	join(<27530..27685,27778..>27879)	Acanthamoeba castellanii str. Neff	14914828
ACA1_082320	mRNA	ACA1_082320	NW_004457352.1	28020	32695	R	ACA1_082320	complement(join(<28020..28196,28278..28436,28525..28653,28747..28845,28936..29018,29122..29259,29334..29500,29570..30206,30315..30458,30550..30659,30762..30834,30939..31065,31118..31270,31299..31424,31474..31623,31738..31855,32004..32272,32354..32589,32680..>32695))	Acanthamoeba castellanii str. Neff	14914827
ACA1_082430	mRNA	ACA1_082430	NW_004457352.1	36520	36975	R	ACA1_082430	complement(join(<36520..36548,36624..36732,36811..36871,36971..>36975))	Acanthamoeba castellanii str. Neff	14914829
ACA1_082540	mRNA	ACA1_082540	NW_004457352.1	37683	38749	R	ACA1_082540	complement(join(<37683..38000,38167..38525,38665..>38749))	Acanthamoeba castellanii str. Neff	14914831
ACA1_016130	mRNA	ACA1_016130	NW_004457351.1	157	899	D	ACA1_016130	join(<157..333,450..>899)	Acanthamoeba castellanii str. Neff	14914817
ACA1_016360	mRNA	ACA1_016360	NW_004457351.1	5550	5980	D	ACA1_016360	join(<5550..5625,5724..5823,5921..>5980)	Acanthamoeba castellanii str. Neff	14914813
ACA1_016470	mRNA	ACA1_016470	NW_004457351.1	6429	6675	R	ACA1_016470	complement(<6429..>6675)	Acanthamoeba castellanii str. Neff	14914814
ACA1_016480	mRNA	ACA1_016480	NW_004457351.1	7361	10030	R	ACA1_016480	complement(join(<7361..7677,7740..8231,8325..8612,8710..8731,8798..8849,8963..9099,9163..9438,9485..9594,9785..9868,9958..>10030))	Acanthamoeba castellanii str. Neff	14914815
ACA1_138750	mRNA	ACA1_138750	NW_004457350.1	138	1560	D	ACA1_138750	join(<138..542,703..>1560)	Acanthamoeba castellanii str. Neff	14914811
ACA1_138760	mRNA	ACA1_138760	NW_004457350.1	1768	4344	R	ACA1_138760	complement(join(<1768..1908,2088..2192,2397..2569,2677..2991,3087..3177,3417..3536,3586..3741,3959..4210,4309..>4344))	Acanthamoeba castellanii str. Neff	14914812
ACA1_138770	mRNA	ACA1_138770	NW_004457350.1	4849	9174	D	ACA1_138770	join(<4849..4919,5358..5382,5420..5466,5531..5677,5854..5924,6015..6198,6311..6437,6572..6784,6840..6979,7080..7176,7370..7714,8073..8123,8273..8448,8536..8693,8815..8907,9011..>9174)	Acanthamoeba castellanii str. Neff	14914776
ACA1_138780	mRNA	ACA1_138780	NW_004457350.1	9625	10664	D	ACA1_138780	join(<9625..9794,9892..10046,10169..10338,10431..>10664)	Acanthamoeba castellanii str. Neff	14914777
ACA1_138790	mRNA	ACA1_138790	NW_004457350.1	10953	11708	D	ACA1_138790	join(<10953..11625,11689..>11708)	Acanthamoeba castellanii str. Neff	14914803
ACA1_138800	mRNA	ACA1_138800	NW_004457350.1	12664	14083	D	ACA1_138800	join(<12664..12684,12783..12933,13058..13540,13731..>14083)	Acanthamoeba castellanii str. Neff	14914804
ACA1_138810	mRNA	ACA1_138810	NW_004457350.1	14273	17919	R	ACA1_138810	complement(join(<14273..14422,14530..14662,14756..14869,14969..15080,15251..15362,15373..15383,15559..15783,15937..16062,16257..16354,16514..16881,16918..16989,17129..17158,17224..17582,17760..>17919))	Acanthamoeba castellanii str. Neff	14914778
ACA1_138820	mRNA	ACA1_138820	NW_004457350.1	18366	23050	D	ACA1_138820	join(<18366..19175,19376..19458,19614..19691,21217..21719,21882..22132,22327..22419,22625..>23050)	Acanthamoeba castellanii str. Neff	14914779
ACA1_138930	mRNA	ACA1_138930	NW_004457350.1	23238	27669	D	ACA1_138930	join(<23238..23550,23678..24017,24207..24253,24480..24608,24710..24777,25049..25134,25336..25501,25766..25877,26033..26161,26284..26463,26647..26756,26824..26896,27043..27165,27304..27352,27507..>27669)	Acanthamoeba castellanii str. Neff	14914780
ACA1_138940	mRNA	ACA1_138940	NW_004457350.1	28217	31515	D	ACA1_138940	join(<28217..28240,28649..28804,29024..29072,29225..29697,29896..29994,30156..30305,30453..30582,30668..30752,30931..31271,31352..>31515)	Acanthamoeba castellanii str. Neff	14914781
ACA1_138950	mRNA	ACA1_138950	NW_004457350.1	34904	35827	R	ACA1_138950	complement(join(<34904..34915,35002..35249,35338..35446,35540..35659,35813..>35827))	Acanthamoeba castellanii str. Neff	14914782
ACA1_138960	mRNA	ACA1_138960	NW_004457350.1	36084	37964	R	ACA1_138960	complement(join(<36084..36124,36158..36289,36410..36516,36580..36715,36796..36902,37040..37091,37195..37300,37414..37470,37573..37647,37737..>37964))	Acanthamoeba castellanii str. Neff	14914805
ACA1_138970	mRNA	ACA1_138970	NW_004457350.1	38156	41755	R	ACA1_138970	complement(join(<38156..38268,38326..38557,38641..38805,38931..39478,39557..39904,40039..40166,40250..40356,40494..40611,40732..40866,41043..>41755))	Acanthamoeba castellanii str. Neff	14914806
ACA1_138980	mRNA	ACA1_138980	NW_004457350.1	42106	46401	R	ACA1_138980	complement(join(<42106..42270,42372..42528,42724..42878,42989..43153,43380..44018,44176..44287,44489..44700,44840..44914,45038..45217,45405..45519,45653..46088,46344..>46401))	Acanthamoeba castellanii str. Neff	14914807
ACA1_138990	mRNA	ACA1_138990	NW_004457350.1	46774	50683	D	ACA1_138990	join(<46774..46973,47169..47310,47412..47771,47985..48124,48205..48336,48531..48849,48962..49182,49288..49604,49738..49887,50043..50209,50396..50500,50588..>50683)	Acanthamoeba castellanii str. Neff	14914808
ACA1_139000	mRNA	ACA1_139000	NW_004457350.1	50920	51315	R	ACA1_139000	complement(<50920..>51315)	Acanthamoeba castellanii str. Neff	14914809
ACA1_139010	mRNA	ACA1_139010	NW_004457350.1	51656	53667	D	ACA1_139010	join(<51656..51711,51794..51929,52026..52116,52186..52262,52351..52458,52515..52591,52691..52816,52895..52989,53100..53238,53326..53405,53492..>53667)	Acanthamoeba castellanii str. Neff	14914810
ACA1_139020	mRNA	ACA1_139020	NW_004457350.1	53844	57174	D	ACA1_139020	join(<53844..53901,53983..54105,54165..54329,54429..54551,54639..54761,54859..54984,55127..55258,55361..55480,55568..55696,55867..55998,56115..56234,56352..56480,56629..57107,57163..>57174)	Acanthamoeba castellanii str. Neff	14914792
ACA1_139030	mRNA	ACA1_139030	NW_004457350.1	57396	58977	D	ACA1_139030	join(<57396..57466,57522..57616,57693..57811,57932..58051,58431..58703,58789..>58977)	Acanthamoeba castellanii str. Neff	14914793
ACA1_139040	mRNA	ACA1_139040	NW_004457350.1	59167	59683	R	ACA1_139040	complement(join(<59167..59423,59542..>59683))	Acanthamoeba castellanii str. Neff	14914794
ACA1_139150	mRNA	ACA1_139150	NW_004457350.1	60471	62875	D	ACA1_139150	join(<60471..60556,60607..60701,61236..61307,61432..61615,61740..61778,62009..62501,62621..>62875)	Acanthamoeba castellanii str. Neff	14914795
ACA1_139260	mRNA	ACA1_139260	NW_004457350.1	63317	64585	R	ACA1_139260	complement(join(<63317..63360,63535..63689,63799..63910,64021..64101,64254..64332,64469..>64585))	Acanthamoeba castellanii str. Neff	14914796
ACA1_139270	mRNA	ACA1_139270	NW_004457350.1	65436	66236	R	ACA1_139270	complement(<65436..>66236)	Acanthamoeba castellanii str. Neff	14914797
ACA1_139280	mRNA	ACA1_139280	NW_004457350.1	66534	69355	R	ACA1_139280	complement(join(<66534..66902,67006..67104,67434..67624,67727..67748,67828..67937,68245..68334,68427..68563,68751..69108,69194..69209,69320..>69355))	Acanthamoeba castellanii str. Neff	14914798
ACA1_139390	mRNA	ACA1_139390	NW_004457350.1	69381	72002	R	ACA1_139390	complement(join(<69381..69908,69977..70776,70881..>72002))	Acanthamoeba castellanii str. Neff	14914799
ACA1_139400	mRNA	ACA1_139400	NW_004457350.1	72994	76008	D	ACA1_139400	join(<72994..73579,73685..73757,73923..74057,74255..74337,74502..74633,74746..74855,75062..75166,75340..75458,75608..75719,75871..>76008)	Acanthamoeba castellanii str. Neff	14914800
ACA1_139410	mRNA	ACA1_139410	NW_004457350.1	76426	82075	R	ACA1_139410	complement(join(<76426..76794,76957..77105,77216..77481,77577..77695,77781..77877,78012..78099,78186..78491,78573..78792,78925..80850,81045..81748,82057..>82075))	Acanthamoeba castellanii str. Neff	14914801
ACA1_139420	mRNA	ACA1_139420	NW_004457350.1	82628	84428	D	ACA1_139420	join(<82628..82900,83035..83322,83562..83687,83861..84107,84355..>84428)	Acanthamoeba castellanii str. Neff	14914802
ACA1_139430	mRNA	ACA1_139430	NW_004457350.1	84652	90146	R	ACA1_139430	complement(join(<84652..85055,85169..85233,85402..85595,85715..85798,85914..86162,86312..86377,86727..87173,87342..87733,87866..88011,88149..88298,88413..88561,88692..88774,88883..89029,89245..89388,89503..89659,89758..89831,89918..90014,90117..>90146))	Acanthamoeba castellanii str. Neff	14914783
ACA1_139540	mRNA	ACA1_139540	NW_004457350.1	90527	92348	D	ACA1_139540	join(<90527..90582,90702..90911,91012..91150,91243..91369,91560..91635,91856..91968,92146..>92348)	Acanthamoeba castellanii str. Neff	14914784
ACA1_139550	mRNA	ACA1_139550	NW_004457350.1	92692	96195	D	ACA1_139550	join(<92692..92919,93058..93219,93322..93473,93570..93794,93938..94045,94175..94360,94463..94756,94854..95089,95214..95350,95456..95623,95763..95836,96048..>96195)	Acanthamoeba castellanii str. Neff	14914785
ACA1_139560	mRNA	ACA1_139560	NW_004457350.1	96328	101034	R	ACA1_139560	complement(join(<96328..96489,96593..96685,96750..96866,96992..97136,97267..97450,97551..97620,97789..97928,98250..98423,98551..98668,98752..99102,99283..99468,99572..99659,99802..99898,100061..100090,100215..100325,100481..100538,100672..100745,101019..>101034))	Acanthamoeba castellanii str. Neff	14914786
ACA1_139570	mRNA	ACA1_139570	NW_004457350.1	101094	101457	R	ACA1_139570	complement(join(<101094..101272,101373..>101457))	Acanthamoeba castellanii str. Neff	14914787
ACA1_139680	mRNA	ACA1_139680	NW_004457350.1	104187	105911	R	ACA1_139680	complement(join(<104187..104212,104286..104414,104679..104748,104907..104985,105088..105196,105359..>105911))	Acanthamoeba castellanii str. Neff	14914788
ACA1_139690	mRNA	ACA1_139690	NW_004457350.1	106765	107268	D	ACA1_139690	<106765..>107268	Acanthamoeba castellanii str. Neff	14914789
ACA1_139700	mRNA	ACA1_139700	NW_004457350.1	109093	110959	D	ACA1_139700	join(<109093..109162,109233..109560,109718..109875,110050..110198,110428..110561,110695..>110959)	Acanthamoeba castellanii str. Neff	14914790
ACA1_139710	mRNA	ACA1_139710	NW_004457350.1	111870	114085	D	ACA1_139710	join(<111870..112016,112291..112384,112481..112575,112825..113043,113127..113311,113450..113569,113683..113827,113966..>114085)	Acanthamoeba castellanii str. Neff	14914791
ACA1_021910	mRNA	ACA1_021910	NW_004457349.1	2575	3119	D	ACA1_021910	join(<2575..2886,2919..>3119)	Acanthamoeba castellanii str. Neff	14914774
ACA1_021920	mRNA	ACA1_021920	NW_004457349.1	3134	3982	D	ACA1_021920	join(<3134..3512,3534..>3982)	Acanthamoeba castellanii str. Neff	14914775
ACA1_025980	mRNA	ACA1_025980	NW_004457348.1	1	4104	R	ACA1_025980	complement(join(<1..360,395..520,798..1201,1320..1499,1569..1823,1925..2008,2191..2287,2581..2672,2795..2881,2978..3180,3317..3506,3616..3695,3844..3961,4051..>4104))	Acanthamoeba castellanii str. Neff	14914771
ACA1_026390	mRNA	ACA1_026390	NW_004457348.1	9771	10173	R	ACA1_026390	complement(join(<9771..9941,10036..>10173))	Acanthamoeba castellanii str. Neff	14914770
ACA1_026500	mRNA	ACA1_026500	NW_004457348.1	12133	13355	R	ACA1_026500	complement(join(<12133..12415,12694..>13355))	Acanthamoeba castellanii str. Neff	14914769
ACA1_020630	mRNA	ACA1_020630	NW_004457347.1	4978	5736	R	ACA1_020630	complement(join(<4978..5076,5107..>5736))	Acanthamoeba castellanii str. Neff	14914766
ACA1_020640	mRNA	ACA1_020640	NW_004457347.1	5912	6840	R	ACA1_020640	complement(join(<5912..6367,6379..>6840))	Acanthamoeba castellanii str. Neff	14914764
ACA1_020650	mRNA	ACA1_020650	NW_004457347.1	7302	8165	R	ACA1_020650	complement(<7302..>8165)	Acanthamoeba castellanii str. Neff	14914765
ACA1_020660	mRNA	ACA1_020660	NW_004457347.1	9207	9572	D	ACA1_020660	<9207..>9572	Acanthamoeba castellanii str. Neff	14914767
ACA1_020670	mRNA	ACA1_020670	NW_004457347.1	11042	12313	D	ACA1_020670	join(<11042..11048,11147..11211,11357..>12313)	Acanthamoeba castellanii str. Neff	14914768
ACA1_131150	mRNA	ACA1_131150	NW_004457346.1	2256	3635	R	ACA1_131150	complement(join(<2256..3248,3291..>3635))	Acanthamoeba castellanii str. Neff	14914723
ACA1_131160	mRNA	ACA1_131160	NW_004457346.1	5043	6515	R	ACA1_131160	complement(<5043..>6515)	Acanthamoeba castellanii str. Neff	14914724
ACA1_131170	mRNA	ACA1_131170	NW_004457346.1	6996	8231	R	ACA1_131170	complement(<6996..>8231)	Acanthamoeba castellanii str. Neff	14914716
ACA1_131180	mRNA	ACA1_131180	NW_004457346.1	12022	12804	R	ACA1_131180	complement(join(<12022..12315,12334..>12804))	Acanthamoeba castellanii str. Neff	14914717
ACA1_131190	mRNA	ACA1_131190	NW_004457346.1	17395	18351	R	ACA1_131190	complement(join(<17395..17490,17578..17663,17694..18112,18281..>18351))	Acanthamoeba castellanii str. Neff	14914718
ACA1_131200	mRNA	ACA1_131200	NW_004457346.1	19080	19451	R	ACA1_131200	complement(<19080..>19451)	Acanthamoeba castellanii str. Neff	14914719
ACA1_131210	mRNA	ACA1_131210	NW_004457346.1	20007	21356	R	ACA1_131210	complement(<20007..>21356)	Acanthamoeba castellanii str. Neff	14914720
ACA1_131220	mRNA	ACA1_131220	NW_004457346.1	21931	33340	R	ACA1_131220	complement(join(<21931..21967,22096..22222,22302..22404,22502..22613,22734..22856,22971..23075,23205..23333,23422..23570,23637..23902,23987..24246,24342..24461,24570..24712,24815..24964,25087..25250,25349..25886,25996..26071,26151..26317,26375..26566,26675..26892,26987..27115,27217..27390,27464..27597,27650..27748,27838..27998,28084..28424,28506..28722,28860..29603,29706..29818,29896..30121,30210..30411,30638..30837,30918..31025,31157..31288,31367..31582,31679..32002,32070..32522,32615..32826,32936..33038,33119..>33340))	Acanthamoeba castellanii str. Neff	14914721
ACA1_131230	mRNA	ACA1_131230	NW_004457346.1	33467	35082	R	ACA1_131230	complement(join(<33467..33825,33892..33993,34090..34270,34370..34574,34754..>35082))	Acanthamoeba castellanii str. Neff	14914722
ACA1_131240	mRNA	ACA1_131240	NW_004457346.1	35436	37460	D	ACA1_131240	join(<35436..35642,35750..35909,35998..36111,36189..36246,36358..36450,36567..36642,36743..36831,36908..36998,37111..37234,37315..>37460)	Acanthamoeba castellanii str. Neff	14914707
ACA1_131250	mRNA	ACA1_131250	NW_004457346.1	37609	38220	R	ACA1_131250	complement(<37609..>38220)	Acanthamoeba castellanii str. Neff	14914708
ACA1_131360	mRNA	ACA1_131360	NW_004457346.1	40138	41052	R	ACA1_131360	complement(<40138..>41052)	Acanthamoeba castellanii str. Neff	14914709
ACA1_131370	mRNA	ACA1_131370	NW_004457346.1	41329	42129	D	ACA1_131370	join(<41329..41497,41577..41779,41869..>42129)	Acanthamoeba castellanii str. Neff	14914710
ACA1_131380	mRNA	ACA1_131380	NW_004457346.1	42328	43759	R	ACA1_131380	complement(join(<42328..42686,42753..43017,43095..43308,43389..>43759))	Acanthamoeba castellanii str. Neff	14914711
ACA1_131390	mRNA	ACA1_131390	NW_004457346.1	43878	45239	D	ACA1_131390	join(<43878..43935,44023..44078,44154..44273,44333..44440,44530..44651,44706..44788,44870..44923,45007..>45239)	Acanthamoeba castellanii str. Neff	14914712
ACA1_131410	mRNA	ACA1_131410	NW_004457346.1	50349	51496	R	ACA1_131410	complement(join(<50349..50864,50886..51444,51465..>51496))	Acanthamoeba castellanii str. Neff	14914714
ACA1_131430	mRNA	ACA1_131430	NW_004457346.1	53040	53968	R	ACA1_131430	complement(join(<53040..53289,53382..53674,53765..>53968))	Acanthamoeba castellanii str. Neff	14914725
ACA1_131440	mRNA	ACA1_131440	NW_004457346.1	56320	57590	R	ACA1_131440	complement(join(<56320..56517,56549..56608,56662..57281,57395..>57590))	Acanthamoeba castellanii str. Neff	14914726
ACA1_131450	mRNA	ACA1_131450	NW_004457346.1	58026	61557	R	ACA1_131450	complement(join(<58026..58118,58219..58347,58483..58569,58662..58801,58882..58980,59073..59196,59252..59369,59460..59572,59681..60069,60186..60831,61003..>61557))	Acanthamoeba castellanii str. Neff	14914727
ACA1_131460	mRNA	ACA1_131460	NW_004457346.1	62371	64424	D	ACA1_131460	join(<62371..62614,62799..62869,62962..63136,63213..63399,63508..64094,64198..>64424)	Acanthamoeba castellanii str. Neff	14914728
ACA1_131470	mRNA	ACA1_131470	NW_004457346.1	64563	65326	R	ACA1_131470	complement(join(<64563..65035,65122..>65326))	Acanthamoeba castellanii str. Neff	14914729
ACA1_131480	mRNA	ACA1_131480	NW_004457346.1	65644	66338	R	ACA1_131480	complement(join(<65644..65906,66015..66135,66246..>66338))	Acanthamoeba castellanii str. Neff	14914730
ACA1_131490	mRNA	ACA1_131490	NW_004457346.1	66595	69894	R	ACA1_131490	complement(join(<66595..66828,66906..67027,67129..67224,67241..67414,67524..67592,67658..67787,67905..67995,68121..68209,68305..68388,68482..68574,68661..68753,68799..68870,68972..69054,69180..69249,69511..>69894))	Acanthamoeba castellanii str. Neff	14914731
ACA1_131500	mRNA	ACA1_131500	NW_004457346.1	69987	70888	D	ACA1_131500	join(<69987..70097,70167..70269,70377..70455,70589..70720,70798..>70888)	Acanthamoeba castellanii str. Neff	14914732
ACA1_131510	mRNA	ACA1_131510	NW_004457346.1	71002	73711	R	ACA1_131510	complement(join(<71002..71198,71311..71572,71691..71777,71904..72233,72355..72454,72561..72700,72843..72926,73025..73090,73205..73357,73540..73571,73681..>73711))	Acanthamoeba castellanii str. Neff	14914733
ACA1_131520	mRNA	ACA1_131520	NW_004457346.1	74733	77977	D	ACA1_131520	join(<74733..75100,75211..75895,75916..77416,77497..77583,77671..77732,77834..>77977)	Acanthamoeba castellanii str. Neff	14914734
ACA1_131530	mRNA	ACA1_131530	NW_004457346.1	78511	79734	D	ACA1_131530	join(<78511..79171,79273..79466,79582..>79734)	Acanthamoeba castellanii str. Neff	14914735
ACA1_131540	mRNA	ACA1_131540	NW_004457346.1	79888	82066	R	ACA1_131540	complement(join(<79888..79993,80121..80242,80361..80470,80592..80673,80781..80895,80982..81178,81193..81629,81766..>82066))	Acanthamoeba castellanii str. Neff	14914736
ACA1_131550	mRNA	ACA1_131550	NW_004457346.1	82324	87830	R	ACA1_131550	complement(join(<82324..82392,82511..82587,82690..82753,82827..82906,82994..83102,83160..83337,83422..83564,83864..84034,84126..84254,84420..84521,84627..84774,84930..85035,85147..85234,85337..85428,85614..85788,85851..86017,86103..86184,86309..86400,86548..86680,86788..86867,86976..87042,87159..87272,87291..87696,87814..>87830))	Acanthamoeba castellanii str. Neff	14914752
ACA1_131560	mRNA	ACA1_131560	NW_004457346.1	88325	89491	R	ACA1_131560	complement(join(<88325..88380,88453..88504,88586..88679,88774..88889,88961..89077,89171..89224,89360..>89491))	Acanthamoeba castellanii str. Neff	14914753
ACA1_131570	mRNA	ACA1_131570	NW_004457346.1	89702	90368	R	ACA1_131570	complement(join(<89702..89928,90030..90127,90244..>90368))	Acanthamoeba castellanii str. Neff	14914754
ACA1_131580	mRNA	ACA1_131580	NW_004457346.1	90484	91855	R	ACA1_131580	complement(join(<90484..90776,90869..90988,91067..91174,91242..91321,91428..>91855))	Acanthamoeba castellanii str. Neff	14914755
ACA1_131590	mRNA	ACA1_131590	NW_004457346.1	92423	92853	R	ACA1_131590	complement(join(<92423..92490,92661..92736,92806..>92853))	Acanthamoeba castellanii str. Neff	14914756
ACA1_131600	mRNA	ACA1_131600	NW_004457346.1	94878	96265	R	ACA1_131600	complement(join(<94878..95155,95212..95370,95445..95607,95679..95800,95866..95965,96035..>96265))	Acanthamoeba castellanii str. Neff	14914757
ACA1_131610	mRNA	ACA1_131610	NW_004457346.1	96784	97707	R	ACA1_131610	complement(join(<96784..96964,97000..97193,97248..97616,97675..>97707))	Acanthamoeba castellanii str. Neff	14914758
ACA1_131620	mRNA	ACA1_131620	NW_004457346.1	97717	98262	R	ACA1_131620	complement(<97717..>98262)	Acanthamoeba castellanii str. Neff	14914759
ACA1_131630	mRNA	ACA1_131630	NW_004457346.1	104960	106339	R	ACA1_131630	complement(join(<104960..105005,105100..105216,105294..105461,105696..105804,105890..105962,106052..106185,106276..>106339))	Acanthamoeba castellanii str. Neff	14914760
ACA1_131740	mRNA	ACA1_131740	NW_004457346.1	106799	114598	D	ACA1_131740	join(<106799..107265,107478..107562,107635..107755,107899..108111,108206..108340,108413..110552,110718..110795,110908..111143,111236..111350,111465..111554,111667..112040,112119..112214,112300..112446,112523..112916,112994..113610,113684..113799,113953..114365,114460..>114598)	Acanthamoeba castellanii str. Neff	14914761
ACA1_131750	mRNA	ACA1_131750	NW_004457346.1	116045	117751	R	ACA1_131750	complement(<116045..>117751)	Acanthamoeba castellanii str. Neff	14914762
ACA1_131760	mRNA	ACA1_131760	NW_004457346.1	118310	120862	R	ACA1_131760	complement(join(<118310..118411,118493..118654,118753..118902,119027..119152,119230..119323,119428..119531,119632..119702,119815..119966,120091..120197,120447..120594,120831..>120862))	Acanthamoeba castellanii str. Neff	14914763
ACA1_131770	mRNA	ACA1_131770	NW_004457346.1	121616	128450	D	ACA1_131770	join(<121616..121669,121740..121779,121924..121951,122325..122416,122507..122601,122718..122750,122857..122961,123061..123195,123371..123508,123635..123749,123853..123945,124026..124098,124199..124393,124482..124715,124915..125170,125313..125355,125437..125741,125815..125874,125994..126080,126198..126384,126500..126579,126708..126823,126907..127073,127214..127345,127465..127609,127676..127843,127930..128027,128112..128200,128319..128400,128437..>128450)	Acanthamoeba castellanii str. Neff	14914737
ACA1_131780	mRNA	ACA1_131780	NW_004457346.1	128490	131388	D	ACA1_131780	join(<128490..128670,128777..128859,129088..129215,129295..129339,129392..129423,129608..129784,129880..129977,130052..130168,130276..130376,130459..130610,130706..130783,130885..130982,131074..131160,131260..>131388)	Acanthamoeba castellanii str. Neff	14914738
ACA1_131790	mRNA	ACA1_131790	NW_004457346.1	131517	132554	D	ACA1_131790	<131517..>132554	Acanthamoeba castellanii str. Neff	14914739
ACA1_131800	mRNA	ACA1_131800	NW_004457346.1	132788	134330	D	ACA1_131800	join(<132788..132883,132977..133063,133179..133232,133452..133635,133745..133796,133919..133958,134073..>134330)	Acanthamoeba castellanii str. Neff	14914740
ACA1_131810	mRNA	ACA1_131810	NW_004457346.1	134516	134899	R	ACA1_131810	complement(join(<134516..134745,134890..>134899))	Acanthamoeba castellanii str. Neff	14914741
ACA1_131820	mRNA	ACA1_131820	NW_004457346.1	135223	137003	D	ACA1_131820	join(<135223..135802,135883..135983,136041..136181,136273..136512,136578..136691,136800..>137003)	Acanthamoeba castellanii str. Neff	14914742
ACA1_131840	mRNA	ACA1_131840	NW_004457346.1	139276	153831	R	ACA1_131840	complement(join(<139276..140148,140269..140368,140453..140568,140734..140857,140973..141062,141174..141315,141444..141537,141655..141815,141925..141985,142063..142269,142374..142553,142647..142719,142807..143120,143204..143336,143428..143581,143759..144011,144143..144310,144371..145257,145381..145504,145616..145844,145936..146123,146264..146481,146591..146729,146809..146856,147131..147241,147335..147416,147534..147694,147826..147873,148064..148222,148343..148472,148604..148805,148913..149042,149157..149255,149354..149505,149627..149804,149934..150070,150173..150341,150445..150576,150656..150826,150921..151600,151735..151859,152011..152164,152246..152462,152587..152726,152850..152982,153303..153359,153448..153568,153695..>153831))	Acanthamoeba castellanii str. Neff	14914744
ACA1_131850	mRNA	ACA1_131850	NW_004457346.1	156250	156775	D	ACA1_131850	join(<156250..156345,156463..156535,156600..>156775)	Acanthamoeba castellanii str. Neff	14914745
ACA1_131860	mRNA	ACA1_131860	NW_004457346.1	157483	159428	D	ACA1_131860	join(<157483..157492,157594..>159428)	Acanthamoeba castellanii str. Neff	14914746
ACA1_131870	mRNA	ACA1_131870	NW_004457346.1	159968	166431	R	ACA1_131870	complement(join(<159968..160783,160875..160993,161090..161203,161292..161381,161453..161563,161668..161731,161814..161958,162066..162252,162340..162446,162539..162751,162840..162965,163070..163172,163276..163402,163503..163603,163690..163951,164201..164295,164368..164409,164474..164549,164626..164728,164812..164960,165035..165108,165187..165380,165463..165556,165631..165757,165971..166032,166111..166178,166244..>166431))	Acanthamoeba castellanii str. Neff	14914747
ACA1_131880	mRNA	ACA1_131880	NW_004457346.1	166692	168002	R	ACA1_131880	complement(join(<166692..166848,166915..167067,167177..167255,167328..167425,167509..167675,167761..167814,167904..>168002))	Acanthamoeba castellanii str. Neff	14914748
ACA1_131890	mRNA	ACA1_131890	NW_004457346.1	168129	169456	D	ACA1_131890	join(<168129..168161,168285..168515,168586..168647,168746..168882,168963..169024,169096..169292,169384..>169456)	Acanthamoeba castellanii str. Neff	14914749
ACA1_131900	mRNA	ACA1_131900	NW_004457346.1	169576	170376	R	ACA1_131900	complement(join(<169576..170054,170190..>170376))	Acanthamoeba castellanii str. Neff	14914750
ACA1_131910	mRNA	ACA1_131910	NW_004457346.1	170814	172069	R	ACA1_131910	complement(join(<170814..171029,171114..171179,171281..171449,171566..171669,171861..171925,172009..>172069))	Acanthamoeba castellanii str. Neff	14914751
ACA1_004850	mRNA	ACA1_004850	NW_004457345.1	89	1566	R	ACA1_004850	complement(join(<89..187,352..451,537..732,822..930,1084..1241,1527..>1566))	Acanthamoeba castellanii str. Neff	14914706
ACA1_004860	mRNA	ACA1_004860	NW_004457345.1	1660	2001	R	ACA1_004860	complement(join(<1660..1715,1794..1938,1981..>2001))	Acanthamoeba castellanii str. Neff	14914701
ACA1_004870	mRNA	ACA1_004870	NW_004457345.1	2195	4475	R	ACA1_004870	complement(join(<2195..2512,4359..>4475))	Acanthamoeba castellanii str. Neff	14914702
ACA1_004980	mRNA	ACA1_004980	NW_004457345.1	4818	6392	D	ACA1_004980	join(<4818..4827,5004..5145,5218..5315,5371..5535,5606..5683,5792..5869,5939..6037,6121..6192,6307..>6392)	Acanthamoeba castellanii str. Neff	14914703
ACA1_004990	mRNA	ACA1_004990	NW_004457345.1	6918	12859	D	ACA1_004990	join(<6918..10804,10852..11884,11898..12597,12630..>12859)	Acanthamoeba castellanii str. Neff	14914704
ACA1_005000	mRNA	ACA1_005000	NW_004457345.1	13247	15531	D	ACA1_005000	join(<13247..13392,13727..13832,14035..14112,14183..14238,14399..14459,14572..14839,14925..15062,15302..15397,15491..>15531)	Acanthamoeba castellanii str. Neff	14914705
ACA1_005010	mRNA	ACA1_005010	NW_004457345.1	16235	16643	D	ACA1_005010	join(<16235..16420,16503..>16643)	Acanthamoeba castellanii str. Neff	14914699
ACA1_005220	mRNA	ACA1_005220	NW_004457345.1	22178	24153	D	ACA1_005220	join(<22178..22301,22456..22556,22667..22745,22872..23031,23120..23245,23338..23460,23567..23639,23810..23923,24001..>24153)	Acanthamoeba castellanii str. Neff	14914700
ACA1_322080	mRNA	ACA1_322080	NW_004457344.1	72	1995	D	ACA1_322080	join(<72..507,578..727,790..1040,1112..1246,1332..1397,1507..1579,1658..1801,1874..>1995)	Acanthamoeba castellanii str. Neff	14914694
ACA1_322090	mRNA	ACA1_322090	NW_004457344.1	2604	10936	R	ACA1_322090	complement(join(<2604..3018,3138..3302,3409..3478,3583..3700,3851..3981,4125..4402,4471..4709,4819..5004,5130..5637,5740..6139,6233..6376,6469..6601,6742..6874,6961..7124,7202..7338,7443..7652,7727..7910,8035..8063,8172..8379,8453..8643,8739..8840,8909..9032,9128..9268,9377..9472,9553..9666,9746..9888,9966..10136,10220..10346,10428..10472,10622..10780,10904..>10936))	Acanthamoeba castellanii str. Neff	14914690
ACA1_322110	mRNA	ACA1_322110	NW_004457344.1	12807	13393	D	ACA1_322110	join(<12807..12976,13036..13135,13166..>13393)	Acanthamoeba castellanii str. Neff	14914684
ACA1_322120	mRNA	ACA1_322120	NW_004457344.1	13817	14821	D	ACA1_322120	join(<13817..13931,14094..14115,14196..14339,14444..14636,14678..>14821)	Acanthamoeba castellanii str. Neff	14914686
ACA1_322130	mRNA	ACA1_322130	NW_004457344.1	14823	17295	D	ACA1_322130	join(<14823..14922,14992..15150,15330..15378,15456..15546,15702..15854,15942..16070,16180..16222,16304..16462,16548..16627,16667..16722,16801..16886,16956..17038,17086..>17295)	Acanthamoeba castellanii str. Neff	14914691
ACA1_322140	mRNA	ACA1_322140	NW_004457344.1	17362	19601	R	ACA1_322140	complement(join(<17362..17582,17670..17801,17906..18005,18242..18323,18390..18517,18621..18740,18822..18919,19068..19187,19365..19409,19583..>19601))	Acanthamoeba castellanii str. Neff	14914685
ACA1_322150	mRNA	ACA1_322150	NW_004457344.1	19798	20908	D	ACA1_322150	join(<19798..19966,20040..20234,20408..20553,20639..>20908)	Acanthamoeba castellanii str. Neff	14914692
ACA1_322160	mRNA	ACA1_322160	NW_004457344.1	21145	22899	D	ACA1_322160	join(<21145..21305,21458..21575,21643..21737,21879..22002,22078..22213,22275..22404,22486..22615,22690..22758,22834..>22899)	Acanthamoeba castellanii str. Neff	14914696
ACA1_322170	mRNA	ACA1_322170	NW_004457344.1	22992	24478	R	ACA1_322170	complement(join(<22992..23074,23172..23274,23406..23438,23506..23762,23817..23869,23971..24191,24263..>24478))	Acanthamoeba castellanii str. Neff	14914683
ACA1_322180	mRNA	ACA1_322180	NW_004457344.1	24708	25083	D	ACA1_322180	join(<24708..24793,24864..>25083)	Acanthamoeba castellanii str. Neff	14914697
ACA1_322200	mRNA	ACA1_322200	NW_004457344.1	25990	28583	D	ACA1_322200	join(<25990..26099,26178..26234,26325..26584,26675..26842,26914..27190,27274..27455,27551..27722,27822..27940,28026..28246,28368..>28583)	Acanthamoeba castellanii str. Neff	14914688
ACA1_322210	mRNA	ACA1_322210	NW_004457344.1	29210	31720	D	ACA1_322210	join(<29210..29374,29605..29703,29823..30012,30090..30229,30320..30361,30469..30539,30622..30746,30860..30958,31077..31180,31312..31582,31677..>31720)	Acanthamoeba castellanii str. Neff	14914689
ACA1_322220	mRNA	ACA1_322220	NW_004457344.1	31886	34038	D	ACA1_322220	join(<31886..31964,32083..32256,32331..32716,32835..33505,33590..33690,33833..>34038)	Acanthamoeba castellanii str. Neff	14914698
ACA1_322230	mRNA	ACA1_322230	NW_004457344.1	34249	37162	R	ACA1_322230	complement(join(<34249..34431,34461..34517,34578..34645,34707..34769,34911..34996,35094..35226,35631..35743,35827..35946,36051..36152,36258..36367,36465..36596,36690..36794,36855..36965,37055..>37162))	Acanthamoeba castellanii str. Neff	14914695
ACA1_363730	mRNA	ACA1_363730	NW_004457343.1	4036	5085	D	ACA1_363730	<4036..>5085	Acanthamoeba castellanii str. Neff	14914625
ACA1_363740	mRNA	ACA1_363740	NW_004457343.1	6663	7518	D	ACA1_363740	join(<6663..7090,7236..7341,7450..>7518)	Acanthamoeba castellanii str. Neff	14914450
ACA1_363750	mRNA	ACA1_363750	NW_004457343.1	7734	8227	R	ACA1_363750	complement(join(<7734..7990,8113..>8227))	Acanthamoeba castellanii str. Neff	14914451
ACA1_363760	mRNA	ACA1_363760	NW_004457343.1	8325	9161	R	ACA1_363760	complement(join(<8325..8417,8501..8623,8722..8771,8847..8925,8997..>9161))	Acanthamoeba castellanii str. Neff	14914476
ACA1_363770	mRNA	ACA1_363770	NW_004457343.1	9520	12476	D	ACA1_363770	join(<9520..9705,9767..9999,10343..10510,10629..10806,10908..11048,11161..11365,11443..11887,11976..12153,12288..>12476)	Acanthamoeba castellanii str. Neff	14914477
ACA1_363780	mRNA	ACA1_363780	NW_004457343.1	12717	14111	D	ACA1_363780	join(<12717..12760,12853..12970,13051..13130,13280..13395,13534..13637,13724..13943,14026..>14111)	Acanthamoeba castellanii str. Neff	14914517
ACA1_363800	mRNA	ACA1_363800	NW_004457343.1	19858	21897	R	ACA1_363800	complement(join(<19858..19985,20091..20193,20278..20419,20506..20540,20631..20662,20798..20926,21106..21177,21288..21385,21506..21593,21753..>21897))	Acanthamoeba castellanii str. Neff	14914587
ACA1_363810	mRNA	ACA1_363810	NW_004457343.1	22443	23027	R	ACA1_363810	complement(join(<22443..22560,22593..22794,22805..>23027))	Acanthamoeba castellanii str. Neff	14914588
ACA1_363820	mRNA	ACA1_363820	NW_004457343.1	23301	27288	D	ACA1_363820	join(<23301..23436,23703..23820,23937..24499,24619..24783,24883..25163,25285..25423,25526..25597,25727..26008,26084..26474,26617..26735,26818..26965,27058..27190,27235..>27288)	Acanthamoeba castellanii str. Neff	14914589
ACA1_363830	mRNA	ACA1_363830	NW_004457343.1	27417	30599	R	ACA1_363830	complement(join(<27417..27567,27625..27939,28042..28276,28358..28760,28919..29160,29249..29404,29486..29654,29719..29940,30024..>30599))	Acanthamoeba castellanii str. Neff	14914590
ACA1_363940	mRNA	ACA1_363940	NW_004457343.1	32104	37483	R	ACA1_363940	complement(join(<32104..32124,32159..34057,35021..35938,36023..36165,36335..36752,37073..>37483))	Acanthamoeba castellanii str. Neff	14914591
ACA1_364050	mRNA	ACA1_364050	NW_004457343.1	39505	42115	R	ACA1_364050	complement(join(<39505..39660,39755..39818,39914..40034,40153..40267,40364..40509,40618..40839,40947..41102,41218..41463,41559..41750,41869..>42115))	Acanthamoeba castellanii str. Neff	14914592
ACA1_364160	mRNA	ACA1_364160	NW_004457343.1	44329	47069	D	ACA1_364160	join(<44329..44493,44724..45742,45821..45939,46032..46333,46431..>47069)	Acanthamoeba castellanii str. Neff	14914593
ACA1_364170	mRNA	ACA1_364170	NW_004457343.1	47342	49754	D	ACA1_364170	join(<47342..47366,47462..47880,47967..48081,48245..48424,48578..48833,48918..49104,49251..49364,49524..>49754)	Acanthamoeba castellanii str. Neff	14914601
ACA1_364180	mRNA	ACA1_364180	NW_004457343.1	50684	52388	D	ACA1_364180	join(<50684..50687,51246..51361,51374..51504,51587..51773,51921..52094,52149..>52388)	Acanthamoeba castellanii str. Neff	14914602
ACA1_364190	mRNA	ACA1_364190	NW_004457343.1	53190	55646	R	ACA1_364190	complement(join(<53190..53267,53367..53474,53548..53991,54146..54220,54337..54444,54570..54657,54756..54859,55011..55234,55372..55390,55503..>55646))	Acanthamoeba castellanii str. Neff	14914603
ACA1_364200	mRNA	ACA1_364200	NW_004457343.1	56029	56666	R	ACA1_364200	complement(join(<56029..56206,56280..56460,56549..>56666))	Acanthamoeba castellanii str. Neff	14914604
ACA1_364210	mRNA	ACA1_364210	NW_004457343.1	57702	58367	D	ACA1_364210	<57702..>58367	Acanthamoeba castellanii str. Neff	14914605
ACA1_364220	mRNA	ACA1_364220	NW_004457343.1	58444	60055	R	ACA1_364220	complement(join(<58444..59926,60012..>60055))	Acanthamoeba castellanii str. Neff	14914606
ACA1_364230	mRNA	ACA1_364230	NW_004457343.1	60417	61548	R	ACA1_364230	complement(join(<60417..60520,60606..>61548))	Acanthamoeba castellanii str. Neff	14914607
ACA1_364240	mRNA	ACA1_364240	NW_004457343.1	61856	63765	R	ACA1_364240	complement(join(<61856..61950,62061..62135,62233..62327,62457..62630,62784..62947,63033..63137,63237..63321,63398..>63765))	Acanthamoeba castellanii str. Neff	14914608
ACA1_364250	mRNA	ACA1_364250	NW_004457343.1	63878	66189	R	ACA1_364250	complement(join(<63878..64565,64688..64779,64897..64986,65107..65182,65256..65338,65443..65683,65770..65892,66008..>66189))	Acanthamoeba castellanii str. Neff	14914609
ACA1_364260	mRNA	ACA1_364260	NW_004457343.1	66381	67718	R	ACA1_364260	complement(join(<66381..66709,66815..>67718))	Acanthamoeba castellanii str. Neff	14914610
ACA1_364270	mRNA	ACA1_364270	NW_004457343.1	67893	69333	D	ACA1_364270	join(<67893..68075,68169..68278,68377..68419,68514..68612,68689..68789,68909..69003,69080..69137,69225..>69333)	Acanthamoeba castellanii str. Neff	14914611
ACA1_364280	mRNA	ACA1_364280	NW_004457343.1	69494	72499	D	ACA1_364280	join(<69494..69931,70055..70499,70611..70961,71119..71357,71534..71890,71969..>72499)	Acanthamoeba castellanii str. Neff	14914612
ACA1_364290	mRNA	ACA1_364290	NW_004457343.1	72722	73534	D	ACA1_364290	join(<72722..72889,72917..>73534)	Acanthamoeba castellanii str. Neff	14914440
ACA1_364300	mRNA	ACA1_364300	NW_004457343.1	73634	75046	R	ACA1_364300	complement(join(<73634..73763,73833..73978,74152..74344,74425..74567,74727..74911,75022..>75046))	Acanthamoeba castellanii str. Neff	14914441
ACA1_364310	mRNA	ACA1_364310	NW_004457343.1	75719	78412	R	ACA1_364310	complement(join(<75719..75899,75991..76087,76191..76276,76361..76446,76535..76729,76808..76900,77015..77135,77215..77287,77384..77492,77600..77732,77803..77912,77952..77968,78033..78136,78219..78283,78380..>78412))	Acanthamoeba castellanii str. Neff	14914442
ACA1_364320	mRNA	ACA1_364320	NW_004457343.1	78577	84062	R	ACA1_364320	complement(join(<78577..78646,78734..78831,78920..79007,79082..79171,79303..79546,79649..79791,79863..80020,80111..80295,80386..80516,80582..80742,80807..80991,81094..81238,81312..81421,81511..81667,81745..81898,81992..82133,82202..82322,82459..82703,82790..82837,82903..82978,83060..83188,83266..83460,83531..83707,83751..83818,83909..>84062))	Acanthamoeba castellanii str. Neff	14914443
ACA1_364330	mRNA	ACA1_364330	NW_004457343.1	85004	86370	R	ACA1_364330	complement(join(<85004..85097,85177..85434,85487..85601,85762..85898,85984..86111,86215..>86370))	Acanthamoeba castellanii str. Neff	14914444
ACA1_364340	mRNA	ACA1_364340	NW_004457343.1	86672	86968	D	ACA1_364340	<86672..>86968	Acanthamoeba castellanii str. Neff	14914445
ACA1_364350	mRNA	ACA1_364350	NW_004457343.1	87491	89879	D	ACA1_364350	join(<87491..87562,87662..87787,87915..88037,88140..88267,88377..88619,88697..88746,88823..88899,89007..89117,89236..89376,89484..89659,89729..>89879)	Acanthamoeba castellanii str. Neff	14914446
ACA1_364370	mRNA	ACA1_364370	NW_004457343.1	93170	94004	D	ACA1_364370	join(<93170..93326,93429..93751,93834..>94004)	Acanthamoeba castellanii str. Neff	14914448
ACA1_364380	mRNA	ACA1_364380	NW_004457343.1	94604	96182	D	ACA1_364380	join(<94604..94657,94790..95772,95870..>96182)	Acanthamoeba castellanii str. Neff	14914449
ACA1_364390	mRNA	ACA1_364390	NW_004457343.1	96576	97239	D	ACA1_364390	join(<96576..96814,96896..97006,97191..>97239)	Acanthamoeba castellanii str. Neff	14914529
ACA1_364400	mRNA	ACA1_364400	NW_004457343.1	98208	101098	D	ACA1_364400	join(<98208..98993,99136..99184,99249..99301,99387..99614,99705..100350,100439..100765,100881..>101098)	Acanthamoeba castellanii str. Neff	14914530
ACA1_364410	mRNA	ACA1_364410	NW_004457343.1	102414	108869	R	ACA1_364410	complement(join(<102414..102545,102646..102792,103208..103362,103501..103695,103789..103870,103943..104134,104475..104629,104753..104947,105019..105110,105198..105655,105788..106394,106511..106655,106755..106924,107047..107096,107174..107296,107384..107553,107661..108141,108219..108449,108534..>108869))	Acanthamoeba castellanii str. Neff	14914531
ACA1_364420	mRNA	ACA1_364420	NW_004457343.1	109151	109401	R	ACA1_364420	complement(join(<109151..109356,109395..>109401))	Acanthamoeba castellanii str. Neff	14914532
ACA1_364430	mRNA	ACA1_364430	NW_004457343.1	109852	111314	R	ACA1_364430	complement(join(<109852..109916,109996..110032,110128..110426,110500..110583,110695..110805,110874..110937,110998..111150,111174..111192,111241..>111314))	Acanthamoeba castellanii str. Neff	14914533
ACA1_364440	mRNA	ACA1_364440	NW_004457343.1	111708	112274	D	ACA1_364440	join(<111708..111883,111959..>112274)	Acanthamoeba castellanii str. Neff	14914534
ACA1_364450	mRNA	ACA1_364450	NW_004457343.1	112297	112779	D	ACA1_364450	join(<112297..112333,112433..112531,112607..>112779)	Acanthamoeba castellanii str. Neff	14914535
ACA1_364460	mRNA	ACA1_364460	NW_004457343.1	114027	114329	R	ACA1_364460	complement(<114027..>114329)	Acanthamoeba castellanii str. Neff	14914536
ACA1_364470	mRNA	ACA1_364470	NW_004457343.1	115498	116151	D	ACA1_364470	join(<115498..115564,115629..115885,116029..>116151)	Acanthamoeba castellanii str. Neff	14914537
ACA1_364480	mRNA	ACA1_364480	NW_004457343.1	116509	118699	R	ACA1_364480	complement(join(<116509..116690,116764..116840,116903..117164,117333..117408,117791..118049,118152..118422,118504..>118699))	Acanthamoeba castellanii str. Neff	14914538
ACA1_364490	mRNA	ACA1_364490	NW_004457343.1	119529	122379	R	ACA1_364490	complement(join(<119529..119575,119593..120600,120680..120787,120875..121004,121108..121227,121333..121419,121506..121619,121734..121865,121971..122092,122211..>122379))	Acanthamoeba castellanii str. Neff	14914539
ACA1_364500	mRNA	ACA1_364500	NW_004457343.1	122677	124889	R	ACA1_364500	complement(join(<122677..122877,122999..123208,123323..123445,123521..123858,123947..124064,124198..124611,124668..124736,124806..>124889))	Acanthamoeba castellanii str. Neff	14914540
ACA1_364510	mRNA	ACA1_364510	NW_004457343.1	125006	126859	R	ACA1_364510	complement(join(<125006..125294,125401..125473,125556..125649,125747..125838,125911..126066,126178..126333,126390..126431,126503..126554,126627..126691,126772..>126859))	Acanthamoeba castellanii str. Neff	14914452
ACA1_364520	mRNA	ACA1_364520	NW_004457343.1	127090	128602	R	ACA1_364520	complement(join(<127090..127695,127756..128267,128335..>128602))	Acanthamoeba castellanii str. Neff	14914453
ACA1_364540	mRNA	ACA1_364540	NW_004457343.1	135554	138248	R	ACA1_364540	complement(join(<135554..135775,135858..136123,136203..136317,136476..136667,136816..136921,137042..137661,137683..138008,138065..>138248))	Acanthamoeba castellanii str. Neff	14914455
ACA1_364550	mRNA	ACA1_364550	NW_004457343.1	138860	142597	D	ACA1_364550	join(<138860..139199,139301..139392,139449..139742,139856..139962,140061..140553,140646..141567,141651..141733,141799..141932,142108..142284,142441..>142597)	Acanthamoeba castellanii str. Neff	14914456
ACA1_364560	mRNA	ACA1_364560	NW_004457343.1	143256	144121	D	ACA1_364560	join(<143256..143847,143865..>144121)	Acanthamoeba castellanii str. Neff	14914457
ACA1_364570	mRNA	ACA1_364570	NW_004457343.1	144248	149508	D	ACA1_364570	join(<144248..145145,145294..145690,145787..145916,145929..146727,146853..146965,147076..147185,147290..147483,147593..147706,147930..148248,148382..148577,148645..148905,148977..149223,149471..>149508)	Acanthamoeba castellanii str. Neff	14914458
ACA1_364580	mRNA	ACA1_364580	NW_004457343.1	150331	150864	D	ACA1_364580	<150331..>150864	Acanthamoeba castellanii str. Neff	14914459
ACA1_364590	mRNA	ACA1_364590	NW_004457343.1	151436	152231	D	ACA1_364590	join(<151436..151650,151737..152113,152194..>152231)	Acanthamoeba castellanii str. Neff	14914460
ACA1_364600	mRNA	ACA1_364600	NW_004457343.1	152368	153815	R	ACA1_364600	complement(join(<152368..152422,152653..152751,152889..152974,153284..153439,153516..153667,153743..>153815))	Acanthamoeba castellanii str. Neff	14914461
ACA1_364610	mRNA	ACA1_364610	NW_004457343.1	155831	157253	R	ACA1_364610	complement(join(<155831..156298,156406..156647,156731..>157253))	Acanthamoeba castellanii str. Neff	14914462
ACA1_364620	mRNA	ACA1_364620	NW_004457343.1	157620	159380	R	ACA1_364620	complement(join(<157620..157851,157960..158072,158230..158372,158489..158594,158681..158785,158872..158946,159033..159166,159287..>159380))	Acanthamoeba castellanii str. Neff	14914463
ACA1_364630	mRNA	ACA1_364630	NW_004457343.1	160957	163466	R	ACA1_364630	complement(join(<160957..161135,161210..161371,161476..161665,161927..162090,162180..162372,162481..162576,162648..>163466))	Acanthamoeba castellanii str. Neff	14914464
ACA1_364640	mRNA	ACA1_364640	NW_004457343.1	164416	165959	D	ACA1_364640	join(<164416..164485,164546..164651,164746..164862,164950..165046,165177..165303,165410..165466,165551..165614,165716..>165959)	Acanthamoeba castellanii str. Neff	14914670
ACA1_364650	mRNA	ACA1_364650	NW_004457343.1	166040	168029	R	ACA1_364650	complement(join(<166040..166300,166407..166605,166718..166815,166989..167071,167212..167334,167450..>168029))	Acanthamoeba castellanii str. Neff	14914671
ACA1_364660	mRNA	ACA1_364660	NW_004457343.1	170350	173389	R	ACA1_364660	complement(join(<170350..170555,170673..170832,170941..171063,171169..171287,171347..171437,171496..171585,171684..171772,171860..171961,172069..172171,172319..172496,172645..173010,173157..>173389))	Acanthamoeba castellanii str. Neff	14914672
ACA1_364670	mRNA	ACA1_364670	NW_004457343.1	173586	174605	R	ACA1_364670	complement(join(<173586..173849,173933..174133,174209..174403,174498..>174605))	Acanthamoeba castellanii str. Neff	14914673
ACA1_364680	mRNA	ACA1_364680	NW_004457343.1	175526	177039	D	ACA1_364680	join(<175526..176138,176259..176664,176706..>177039)	Acanthamoeba castellanii str. Neff	14914674
ACA1_364690	mRNA	ACA1_364690	NW_004457343.1	177502	178384	D	ACA1_364690	join(<177502..177634,177736..177916,178015..178153,178226..>178384)	Acanthamoeba castellanii str. Neff	14914675
ACA1_364700	mRNA	ACA1_364700	NW_004457343.1	178540	179415	R	ACA1_364700	complement(join(<178540..178986,179095..179227,179342..>179415))	Acanthamoeba castellanii str. Neff	14914676
ACA1_364710	mRNA	ACA1_364710	NW_004457343.1	179540	182768	R	ACA1_364710	complement(join(<179540..179584,179611..180147,180204..180276,180395..180827,180906..180989,181090..181173,181256..181363,181589..>182768))	Acanthamoeba castellanii str. Neff	14914677
ACA1_364720	mRNA	ACA1_364720	NW_004457343.1	183562	186255	R	ACA1_364720	complement(join(<183562..183890,183983..184222,184299..184376,184458..184667,184743..184893,185230..185338,185418..185576,185658..185796,185943..>186255))	Acanthamoeba castellanii str. Neff	14914678
ACA1_364730	mRNA	ACA1_364730	NW_004457343.1	186702	187181	R	ACA1_364730	complement(join(<186702..186993,187036..>187181))	Acanthamoeba castellanii str. Neff	14914679
ACA1_364740	mRNA	ACA1_364740	NW_004457343.1	187700	188428	R	ACA1_364740	complement(join(<187700..187830,187930..>188428))	Acanthamoeba castellanii str. Neff	14914680
ACA1_364750	mRNA	ACA1_364750	NW_004457343.1	189334	190379	R	ACA1_364750	complement(join(<189334..189443,189571..189597,189671..189811,189932..190220,190278..>190379))	Acanthamoeba castellanii str. Neff	14914613
ACA1_364760	mRNA	ACA1_364760	NW_004457343.1	190560	192822	D	ACA1_364760	join(<190560..190596,190706..190830,190976..191053,191279..191396,191494..191609,191713..191813,191957..192031,192318..192406,192500..192624,192766..>192822)	Acanthamoeba castellanii str. Neff	14914614
ACA1_364770	mRNA	ACA1_364770	NW_004457343.1	192955	195254	R	ACA1_364770	complement(join(<192955..193245,193391..193500,193585..193690,193762..194007,194104..194286,194466..194558,194643..194721,194891..195065,195203..>195254))	Acanthamoeba castellanii str. Neff	14914615
ACA1_364780	mRNA	ACA1_364780	NW_004457343.1	195601	198855	R	ACA1_364780	complement(join(<195601..195726,195840..196001,196098..196164,196237..196305,196421..196575,196694..196811,196891..196969,197196..197286,197431..197523,197655..197735,197849..197914,198041..198196,198321..198418,198621..>198855))	Acanthamoeba castellanii str. Neff	14914616
ACA1_364890	mRNA	ACA1_364890	NW_004457343.1	199779	200414	D	ACA1_364890	join(<199779..199988,200046..200103,200152..>200414)	Acanthamoeba castellanii str. Neff	14914617
ACA1_364900	mRNA	ACA1_364900	NW_004457343.1	200437	200805	D	ACA1_364900	<200437..>200805	Acanthamoeba castellanii str. Neff	14914618
ACA1_365010	mRNA	ACA1_365010	NW_004457343.1	201479	202732	R	ACA1_365010	complement(join(<201479..201802,201924..201991,202077..202146,202248..202407,202490..202533,202598..>202732))	Acanthamoeba castellanii str. Neff	14914619
ACA1_365020	mRNA	ACA1_365020	NW_004457343.1	202846	203762	D	ACA1_365020	join(<202846..203089,203315..203401,203548..>203762)	Acanthamoeba castellanii str. Neff	14914620
ACA1_365030	mRNA	ACA1_365030	NW_004457343.1	204154	209552	D	ACA1_365030	join(<204154..204174,204202..204291,204472..204708,205331..205432,205788..205868,206032..206133,206296..206610,206697..207087,207210..207342,207483..207543,207673..207765,207851..208037,208138..208305,208412..208522,208632..208794,208910..209039,209178..>209552)	Acanthamoeba castellanii str. Neff	14914621
ACA1_365040	mRNA	ACA1_365040	NW_004457343.1	209702	210935	R	ACA1_365040	complement(join(<209702..209875,209954..209978,210070..210155,210268..210336,210503..210655,210843..>210935))	Acanthamoeba castellanii str. Neff	14914622
ACA1_365050	mRNA	ACA1_365050	NW_004457343.1	211423	215255	R	ACA1_365050	complement(join(<211423..211524,211692..211790,211905..211998,212086..212191,212314..212405,212495..212552,212862..212918,213005..213127,213224..213287,213366..213443,213565..213684,213758..213955,214081..214192,214276..214373,214506..214591,214706..214853,214947..215037,215104..>215255))	Acanthamoeba castellanii str. Neff	14914623
ACA1_365060	mRNA	ACA1_365060	NW_004457343.1	215295	215683	R	ACA1_365060	complement(join(<215295..215399,215504..>215683))	Acanthamoeba castellanii str. Neff	14914624
ACA1_365070	mRNA	ACA1_365070	NW_004457343.1	215779	229790	R	ACA1_365070	complement(join(<215779..216167,216332..216454,216615..216749,216853..217009,217108..217221,217306..217497,217638..217966,218100..218170,218250..218448,218559..218697,218806..218960,219169..219325,219420..219539,219652..219926,220064..220162,220253..220351,220436..220583,220684..220768,220955..221636,221735..221850,221928..222011,222160..222293,222387..222847,222950..223056,223167..223293,223367..223491,223608..223782,223855..224012,224152..224288,224395..224578,224659..224999,225146..225422,225508..226173,226263..226743,226813..227146,227260..227376,227465..227780,227862..228739,228824..229204,229491..>229790))	Acanthamoeba castellanii str. Neff	14914594
ACA1_365080	mRNA	ACA1_365080	NW_004457343.1	229977	233204	R	ACA1_365080	complement(join(<229977..230208,230289..230883,230961..231403,231495..231600,231675..231725,231799..232321,232413..232511,232569..232737,232823..232905,232998..233061,233164..>233204))	Acanthamoeba castellanii str. Neff	14914595
ACA1_365090	mRNA	ACA1_365090	NW_004457343.1	233499	235284	D	ACA1_365090	join(<233499..233604,233684..233838,233922..234055,234190..234290,234366..234437,234504..234619,234701..234844,234925..235057,235121..>235284)	Acanthamoeba castellanii str. Neff	14914596
ACA1_365100	mRNA	ACA1_365100	NW_004457343.1	235383	238622	R	ACA1_365100	complement(join(<235383..235557,235652..235756,235876..235997,236084..236158,236255..236413,236528..236683,236771..236913,237043..237148,237165..237279,237386..237486,237578..237720,237807..237898,238006..238174,238321..238465,238542..>238622))	Acanthamoeba castellanii str. Neff	14914597
ACA1_365110	mRNA	ACA1_365110	NW_004457343.1	239331	240841	D	ACA1_365110	join(<239331..239375,239444..239572,239673..239811,240039..240319,240431..240565,240641..240738,240820..>240841)	Acanthamoeba castellanii str. Neff	14914598
ACA1_365220	mRNA	ACA1_365220	NW_004457343.1	242051	248299	D	ACA1_365220	join(<242051..242177,242313..242389,242460..242761,242842..243168,243246..243363,243448..243693,243769..244240,244378..244537,244635..245095,245194..245463,245578..245711,245975..246112,246233..246397,246475..246599,246774..247039,247143..247378,247491..248043,248127..>248299)	Acanthamoeba castellanii str. Neff	14914599
ACA1_365330	mRNA	ACA1_365330	NW_004457343.1	248468	249189	R	ACA1_365330	complement(join(<248468..248579,248667..248907,249120..>249189))	Acanthamoeba castellanii str. Neff	14914600
ACA1_365340	mRNA	ACA1_365340	NW_004457343.1	249367	250086	D	ACA1_365340	join(<249367..249436,249526..249603,249683..249874,249944..>250086)	Acanthamoeba castellanii str. Neff	14914519
ACA1_365350	mRNA	ACA1_365350	NW_004457343.1	250209	250829	R	ACA1_365350	complement(join(<250209..250560,250657..>250829))	Acanthamoeba castellanii str. Neff	14914520
ACA1_365360	mRNA	ACA1_365360	NW_004457343.1	251029	253537	R	ACA1_365360	complement(join(<251029..251164,251292..251365,251468..251614,251631..252497,252531..252680,252757..252911,252998..253133,253258..253336,253443..>253537))	Acanthamoeba castellanii str. Neff	14914521
ACA1_365370	mRNA	ACA1_365370	NW_004457343.1	254058	255931	D	ACA1_365370	join(<254058..254163,254257..254318,254377..254480,254716..254825,254901..255006,255078..255210,255304..255409,255488..255594,255672..255742,255838..>255931)	Acanthamoeba castellanii str. Neff	14914522
ACA1_365380	mRNA	ACA1_365380	NW_004457343.1	256456	257921	D	ACA1_365380	join(<256456..256486,256620..256877,256939..257044,257111..257246,257295..257430,257516..257622,257693..257763,257819..>257921)	Acanthamoeba castellanii str. Neff	14914523
ACA1_365390	mRNA	ACA1_365390	NW_004457343.1	258300	270395	D	ACA1_365390	join(<258300..258387,258486..258627,258793..258973,259104..259178,259258..259501,259589..259652,259738..259968,260085..260247,260338..260529,260647..260872,260973..261640,261737..261826,261917..262017,262103..262355,262435..262578,262708..263056,263151..263332,263419..263618,263714..263933,264018..264127,264231..264723,264848..264937,265054..265453,265560..265876,265961..266141,266230..266393,266471..266755,266853..267029,267113..267322,267407..267606,267711..268203,268300..269147,269241..269452,269547..269781,269888..270029,270153..>270395)	Acanthamoeba castellanii str. Neff	14914524
ACA1_365400	mRNA	ACA1_365400	NW_004457343.1	270543	271130	D	ACA1_365400	<270543..>271130	Acanthamoeba castellanii str. Neff	14914525
ACA1_365410	mRNA	ACA1_365410	NW_004457343.1	271261	274109	D	ACA1_365410	join(<271261..271551,271634..271743,271853..271938,272009..272169,272245..272400,272507..272654,272743..272853,272952..273064,273168..273336,273419..273535,273652..273749,273933..>274109)	Acanthamoeba castellanii str. Neff	14914526
ACA1_365420	mRNA	ACA1_365420	NW_004457343.1	274400	278713	D	ACA1_365420	join(<274400..274986,275043..275149,275273..275436,275521..275759,275899..276231,276358..276427,276494..276742,276824..277016,277074..277162,277217..277309,277409..277580,277728..277894,277961..>278713)	Acanthamoeba castellanii str. Neff	14914527
ACA1_365430	mRNA	ACA1_365430	NW_004457343.1	278910	284367	D	ACA1_365430	join(<278910..278994,279027..279096,279151..279327,279429..279550,279641..279762,279885..279993,280029..280213,280353..280453,280566..280742,280816..280906,281074..281204,281308..281383,281471..281657,281767..281919,282021..282063,282147..282186,282325..282493,282569..282708,282772..282852,282946..283018,283088..283444,283547..283683,283796..284020,284125..>284367)	Acanthamoeba castellanii str. Neff	14914528
ACA1_365660	mRNA	ACA1_365660	NW_004457343.1	288339	289033	R	ACA1_365660	complement(join(<288339..288349,288472..288831,288853..>289033))	Acanthamoeba castellanii str. Neff	14914492
ACA1_365670	mRNA	ACA1_365670	NW_004457343.1	289130	290585	R	ACA1_365670	complement(join(<289130..289324,289435..289553,289690..289808,290002..290093,290165..290273,290378..290427,290535..>290585))	Acanthamoeba castellanii str. Neff	14914493
ACA1_365680	mRNA	ACA1_365680	NW_004457343.1	290744	293810	R	ACA1_365680	complement(join(<290744..290888,290994..291088,291165..291301,291401..291437,291461..291541,291692..291808,291898..292047,292142..292311,292410..292534,292618..292749,293001..293102,293195..293391,293487..293576,293667..>293810))	Acanthamoeba castellanii str. Neff	14914494
ACA1_365690	mRNA	ACA1_365690	NW_004457343.1	293906	297261	D	ACA1_365690	join(<293906..294325,294406..295648,295666..295835,295882..296602,296625..297036,297102..>297261)	Acanthamoeba castellanii str. Neff	14914495
ACA1_365700	mRNA	ACA1_365700	NW_004457343.1	297616	298317	D	ACA1_365700	<297616..>298317	Acanthamoeba castellanii str. Neff	14914496
ACA1_365710	mRNA	ACA1_365710	NW_004457343.1	298619	304467	R	ACA1_365710	complement(join(<298619..298887,299004..299100,299188..299364,299448..299644,299729..299836,299944..300022,300111..300657,300737..300816,300921..301242,301327..302389,302481..302716,302827..302949,303048..303167,303279..303535,303631..303784,303883..304079,304321..>304467))	Acanthamoeba castellanii str. Neff	14914497
ACA1_365720	mRNA	ACA1_365720	NW_004457343.1	305045	306759	D	ACA1_365720	join(<305045..305213,305281..305591,305810..306322,306415..>306759)	Acanthamoeba castellanii str. Neff	14914498
ACA1_365730	mRNA	ACA1_365730	NW_004457343.1	307092	310532	D	ACA1_365730	join(<307092..308132,308228..308461,308578..308796,308871..309116,309224..309359,309435..310258,310356..>310532)	Acanthamoeba castellanii str. Neff	14914499
ACA1_365740	mRNA	ACA1_365740	NW_004457343.1	310827	311447	R	ACA1_365740	complement(join(<310827..310976,311067..>311447))	Acanthamoeba castellanii str. Neff	14914500
ACA1_365750	mRNA	ACA1_365750	NW_004457343.1	311959	312628	D	ACA1_365750	join(<311959..312064,312152..312199,312286..312430,312445..>312628)	Acanthamoeba castellanii str. Neff	14914626
ACA1_365760	mRNA	ACA1_365760	NW_004457343.1	312889	313699	R	ACA1_365760	complement(join(<312889..312990,313075..313209,313303..313385,313441..313531,313616..>313699))	Acanthamoeba castellanii str. Neff	14914627
ACA1_365780	mRNA	ACA1_365780	NW_004457343.1	320003	320569	D	ACA1_365780	<320003..>320569	Acanthamoeba castellanii str. Neff	14914629
ACA1_365790	mRNA	ACA1_365790	NW_004457343.1	320706	321528	R	ACA1_365790	complement(join(<320706..321024,321077..321287,321352..321452,321509..>321528))	Acanthamoeba castellanii str. Neff	14914630
ACA1_365800	mRNA	ACA1_365800	NW_004457343.1	322458	328423	D	ACA1_365800	join(<322458..322810,322915..323085,323180..323366,323547..323726,323820..324143,324214..324793,324894..325025,325085..325136,325387..325771,326043..326167,326278..326459,326532..326755,326837..327026,327131..327171,327251..328019,328083..328264,328346..>328423)	Acanthamoeba castellanii str. Neff	14914631
ACA1_365810	mRNA	ACA1_365810	NW_004457343.1	328824	329477	D	ACA1_365810	join(<328824..329187,329257..>329477)	Acanthamoeba castellanii str. Neff	14914632
ACA1_365820	mRNA	ACA1_365820	NW_004457343.1	329554	331518	R	ACA1_365820	complement(join(<329554..329991,330106..330238,330307..330444,330531..330804,330881..331091,331192..>331518))	Acanthamoeba castellanii str. Neff	14914633
ACA1_365830	mRNA	ACA1_365830	NW_004457343.1	331786	333657	D	ACA1_365830	join(<331786..331908,331993..332087,332207..332396,332444..332600,332685..332801,332987..333111,333186..333314,333505..>333657)	Acanthamoeba castellanii str. Neff	14914634
ACA1_365840	mRNA	ACA1_365840	NW_004457343.1	333764	334983	R	ACA1_365840	complement(join(<333764..334667,334745..>334983))	Acanthamoeba castellanii str. Neff	14914635
ACA1_365850	mRNA	ACA1_365850	NW_004457343.1	335535	336186	R	ACA1_365850	complement(join(<335535..335636,335706..335786,336055..>336186))	Acanthamoeba castellanii str. Neff	14914636
ACA1_365860	mRNA	ACA1_365860	NW_004457343.1	336516	337896	R	ACA1_365860	complement(join(<336516..337092,337202..337284,337438..337612,337712..>337896))	Acanthamoeba castellanii str. Neff	14914637
ACA1_365870	mRNA	ACA1_365870	NW_004457343.1	338070	339427	R	ACA1_365870	complement(join(<338070..338189,338262..338507,338576..338665,338721..338842,338918..338995,339068..339237,339301..339374,339407..>339427))	Acanthamoeba castellanii str. Neff	14914638
ACA1_365880	mRNA	ACA1_365880	NW_004457343.1	340036	343501	R	ACA1_365880	complement(join(<340036..340803,340846..340978,341070..341146,341209..341276,341380..341438,341511..341612,341681..341777,341847..342156,342231..342325,342415..342547,342639..342779,342869..343008,343067..343157,343253..>343501))	Acanthamoeba castellanii str. Neff	14914660
ACA1_366090	mRNA	ACA1_366090	NW_004457343.1	345469	347006	R	ACA1_366090	complement(join(<345469..345486,345555..345652,345717..345828,345942..346073,346157..346383,346448..346529,346596..346853,346947..>347006))	Acanthamoeba castellanii str. Neff	14914661
ACA1_366100	mRNA	ACA1_366100	NW_004457343.1	348458	349370	R	ACA1_366100	complement(join(<348458..348605,348662..348735,348800..348866,348994..349076,349132..349270,349345..>349370))	Acanthamoeba castellanii str. Neff	14914662
ACA1_366110	mRNA	ACA1_366110	NW_004457343.1	349750	351236	D	ACA1_366110	join(<349750..349813,349878..349954,350020..350066,350151..350345,350419..350476,350547..350765,350899..351065,351149..>351236)	Acanthamoeba castellanii str. Neff	14914663
ACA1_366120	mRNA	ACA1_366120	NW_004457343.1	351897	357476	D	ACA1_366120	join(<351897..351914,351935..352102,352184..352274,352445..352551,352607..352707,352778..352877,352954..353871,353956..354175,354268..354413,354491..354586,354698..354832,354956..355123,355229..355382,355482..355654,355760..355942,356089..356316,356328..356469,356541..356755,356851..357123,357231..>357476)	Acanthamoeba castellanii str. Neff	14914664
ACA1_366130	mRNA	ACA1_366130	NW_004457343.1	357959	358737	D	ACA1_366130	join(<357959..358209,358287..>358737)	Acanthamoeba castellanii str. Neff	14914665
ACA1_366140	mRNA	ACA1_366140	NW_004457343.1	358844	361148	R	ACA1_366140	complement(join(<358844..358925,359001..359037,359118..359193,359268..359349,359735..359887,359971..360196,360268..360369,360504..360614,360689..360821,360884..361039,361122..>361148))	Acanthamoeba castellanii str. Neff	14914666
ACA1_366150	mRNA	ACA1_366150	NW_004457343.1	361229	364264	R	ACA1_366150	complement(join(<361229..361484,361587..361683,361802..361918,362028..362121,362155..362477,362626..362775,362879..362916,362984..363161,363245..363455,363537..363755,363868..364115,364201..>364264))	Acanthamoeba castellanii str. Neff	14914667
ACA1_366160	mRNA	ACA1_366160	NW_004457343.1	364492	367863	D	ACA1_366160	join(<364492..364542,364624..364731,364826..364913,365056..365135,365224..365290,365380..365428,365518..365611,365764..365840,366005..366131,366238..366324,366400..366454,366572..366750,366873..366955,367041..367122,367223..367333,367440..367496,367585..>367863)	Acanthamoeba castellanii str. Neff	14914668
ACA1_366170	mRNA	ACA1_366170	NW_004457343.1	368075	369666	R	ACA1_366170	complement(join(<368075..368231,368361..368552,368701..368897,369053..369270,369286..369425,369501..369568,369661..>369666))	Acanthamoeba castellanii str. Neff	14914669
ACA1_366180	mRNA	ACA1_366180	NW_004457343.1	370121	371357	R	ACA1_366180	complement(join(<370121..370285,370423..370577,370644..370872,370963..371147,371255..>371357))	Acanthamoeba castellanii str. Neff	14914541
ACA1_366190	mRNA	ACA1_366190	NW_004457343.1	371889	374223	R	ACA1_366190	complement(join(<371889..372041,372158..372465,372670..372769,372891..373027,373109..373457,373608..373777,373871..373983,374066..>374223))	Acanthamoeba castellanii str. Neff	14914542
ACA1_366210	mRNA	ACA1_366210	NW_004457343.1	375938	377350	R	ACA1_366210	complement(join(<375938..376280,376373..376590,376673..376850,376942..377058,377136..>377350))	Acanthamoeba castellanii str. Neff	14914544
ACA1_366220	mRNA	ACA1_366220	NW_004457343.1	377754	378894	D	ACA1_366220	join(<377754..378220,378330..378408,378574..378663,378742..>378894)	Acanthamoeba castellanii str. Neff	14914545
ACA1_366230	mRNA	ACA1_366230	NW_004457343.1	379086	379620	D	ACA1_366230	join(<379086..379311,379400..>379620)	Acanthamoeba castellanii str. Neff	14914546
ACA1_366240	mRNA	ACA1_366240	NW_004457343.1	379723	380622	R	ACA1_366240	complement(join(<379723..380076,380117..380302,380389..>380622))	Acanthamoeba castellanii str. Neff	14914547
ACA1_366250	mRNA	ACA1_366250	NW_004457343.1	380876	382405	R	ACA1_366250	complement(join(<380876..380980,381055..381166,381283..381409,381488..381689,381763..381824,381929..382088,382187..>382405))	Acanthamoeba castellanii str. Neff	14914548
ACA1_366260	mRNA	ACA1_366260	NW_004457343.1	382577	385057	R	ACA1_366260	complement(join(<382577..382639,382738..382922,383008..383093,383174..383256,383351..383425,383493..383581,383655..383740,383831..383966,384057..384072,384186..384325,384414..384519,384615..384649,384725..384835,384910..>385057))	Acanthamoeba castellanii str. Neff	14914549
ACA1_366270	mRNA	ACA1_366270	NW_004457343.1	385472	386350	D	ACA1_366270	join(<385472..385583,385657..385771,385848..385885,385977..386075,386178..>386350)	Acanthamoeba castellanii str. Neff	14914550
ACA1_366280	mRNA	ACA1_366280	NW_004457343.1	386428	386976	R	ACA1_366280	complement(join(<386428..386453,386536..386668,386741..386863,386929..>386976))	Acanthamoeba castellanii str. Neff	14914551
ACA1_366290	mRNA	ACA1_366290	NW_004457343.1	387253	387713	D	ACA1_366290	join(<387253..387333,387376..387412,387474..387549,387587..>387713)	Acanthamoeba castellanii str. Neff	14914552
ACA1_366300	mRNA	ACA1_366300	NW_004457343.1	387784	388558	D	ACA1_366300	join(<387784..387829,387938..388036,388174..388320,388455..>388558)	Acanthamoeba castellanii str. Neff	14914575
ACA1_366310	mRNA	ACA1_366310	NW_004457343.1	388896	390202	D	ACA1_366310	join(<388896..388983,389190..389206,389353..389531,389643..389781,389863..389932,390051..>390202)	Acanthamoeba castellanii str. Neff	14914576
ACA1_366320	mRNA	ACA1_366320	NW_004457343.1	390668	393654	D	ACA1_366320	join(<390668..391216,391303..391478,391551..>393654)	Acanthamoeba castellanii str. Neff	14914577
ACA1_366330	mRNA	ACA1_366330	NW_004457343.1	393990	394307	D	ACA1_366330	<393990..>394307	Acanthamoeba castellanii str. Neff	14914578
ACA1_366340	mRNA	ACA1_366340	NW_004457343.1	394747	399183	D	ACA1_366340	join(<394747..395032,395103..395278,395424..395547,395637..395800,395909..396111,396232..396301,396493..396668,396749..396874,396938..397018,397137..397211,397314..397450,397564..397627,397716..397830,397938..398111,398190..398303,398424..398573,398678..398785,398847..398983,399102..>399183)	Acanthamoeba castellanii str. Neff	14914579
ACA1_366350	mRNA	ACA1_366350	NW_004457343.1	399454	400732	R	ACA1_366350	complement(join(<399454..399527,399644..399873,399980..400125,400229..400378,400400..400458,400522..>400732))	Acanthamoeba castellanii str. Neff	14914580
ACA1_366360	mRNA	ACA1_366360	NW_004457343.1	401651	402115	D	ACA1_366360	join(<401651..401681,401790..401859,401923..>402115)	Acanthamoeba castellanii str. Neff	14914581
ACA1_366370	mRNA	ACA1_366370	NW_004457343.1	402591	403468	D	ACA1_366370	join(<402591..403127,403226..>403468)	Acanthamoeba castellanii str. Neff	14914582
ACA1_366380	mRNA	ACA1_366380	NW_004457343.1	403707	404151	R	ACA1_366380	complement(join(<403707..403737,403769..403894,403982..>404151))	Acanthamoeba castellanii str. Neff	14914583
ACA1_366390	mRNA	ACA1_366390	NW_004457343.1	404344	407626	R	ACA1_366390	complement(join(<404344..404473,404699..404777,404878..405021,405104..405200,405353..405421,405491..405582,405661..405781,405916..406001,406273..406374,406449..406547,406645..406803,406870..406980,407099..407263,407377..>407626))	Acanthamoeba castellanii str. Neff	14914584
ACA1_366400	mRNA	ACA1_366400	NW_004457343.1	407747	411325	R	ACA1_366400	complement(join(<407747..407871,407976..408093,408220..408385,408469..408562,408679..408799,408884..409000,409213..409439,409542..409675,409792..409885,409975..410134,410209..410313,410400..410528,410653..410732,410813..410982,411017..411083,411175..411229,411296..>411325))	Acanthamoeba castellanii str. Neff	14914585
ACA1_366410	mRNA	ACA1_366410	NW_004457343.1	411640	414995	R	ACA1_366410	complement(join(<411640..411921,412000..412388,412503..412982,413108..413234,413316..413441,413539..413812,413925..414690,414830..>414995))	Acanthamoeba castellanii str. Neff	14914586
ACA1_366420	mRNA	ACA1_366420	NW_004457343.1	416081	419343	D	ACA1_366420	join(<416081..416093,416171..416319,416425..416523,416618..416696,416788..416914,417011..417123,417266..417356,417477..417606,417710..417819,417890..417968,418047..418095,418205..418353,418467..418762,418893..418952,419056..419200,419260..>419343)	Acanthamoeba castellanii str. Neff	14914509
ACA1_366430	mRNA	ACA1_366430	NW_004457343.1	419482	422374	R	ACA1_366430	complement(join(<419482..419687,419781..419865,419944..420008,420116..420288,420388..420512,420611..420728,420820..421020,421121..421336,421432..421570,421660..421766,421912..422043,422184..>422374))	Acanthamoeba castellanii str. Neff	14914510
ACA1_366440	mRNA	ACA1_366440	NW_004457343.1	423242	430899	D	ACA1_366440	join(<423242..423348,423548..423684,423917..424067,424174..424369,424501..424616,424737..424877,424973..425183,425238..425354,425503..425568,425669..425786,425866..425989,426156..426264,426366..426539,426603..426715,426822..426984,427095..427213,427360..427538,427641..427796,427881..428209,428314..428493,428570..428760,428929..429211,429303..429426,429517..429646,429747..429909,430059..430265,430336..430500,430624..>430899)	Acanthamoeba castellanii str. Neff	14914511
ACA1_366450	mRNA	ACA1_366450	NW_004457343.1	430961	433050	R	ACA1_366450	complement(join(<430961..431196,431284..431468,431590..431717,431809..431961,432075..432278,432352..>433050))	Acanthamoeba castellanii str. Neff	14914512
ACA1_366460	mRNA	ACA1_366460	NW_004457343.1	433434	434341	D	ACA1_366460	join(<433434..433572,433642..433689,433755..433823,433895..434105,434242..>434341)	Acanthamoeba castellanii str. Neff	14914513
ACA1_366470	mRNA	ACA1_366470	NW_004457343.1	434392	435326	R	ACA1_366470	complement(join(<434392..434525,434634..434984,435061..435126,435188..>435326))	Acanthamoeba castellanii str. Neff	14914514
ACA1_366480	mRNA	ACA1_366480	NW_004457343.1	435574	437164	D	ACA1_366480	join(<435574..435752,435827..435975,436046..436131,436224..436333,436450..436601,436686..>437164)	Acanthamoeba castellanii str. Neff	14914515
ACA1_366490	mRNA	ACA1_366490	NW_004457343.1	437601	440236	D	ACA1_366490	join(<437601..437676,437715..437957,438029..438137,438249..438312,438454..438591,438692..438918,439025..439105,439237..439768,439877..>440236)	Acanthamoeba castellanii str. Neff	14914516
ACA1_366500	mRNA	ACA1_366500	NW_004457343.1	440740	441833	R	ACA1_366500	complement(join(<440740..440841,440922..441026,441157..441228,441306..441407,441475..441605,441734..>441833))	Acanthamoeba castellanii str. Neff	14914478
ACA1_366510	mRNA	ACA1_366510	NW_004457343.1	442396	446036	D	ACA1_366510	join(<442396..442915,443017..443143,443235..443335,443420..443472,443574..443657,443756..444018,444120..444271,444434..444487,444580..444711,444802..444918,445019..445144,445261..>446036)	Acanthamoeba castellanii str. Neff	14914479
ACA1_366520	mRNA	ACA1_366520	NW_004457343.1	446257	446858	D	ACA1_366520	join(<446257..446430,446500..446577,446655..>446858)	Acanthamoeba castellanii str. Neff	14914480
ACA1_366530	mRNA	ACA1_366530	NW_004457343.1	446890	449025	R	ACA1_366530	complement(join(<446890..447032,447115..447180,447243..447336,447448..448495,448612..448674,448739..>449025))	Acanthamoeba castellanii str. Neff	14914481
ACA1_366540	mRNA	ACA1_366540	NW_004457343.1	449569	450924	D	ACA1_366540	join(<449569..449646,449738..449907,449999..450111,450210..450404,450479..>450924)	Acanthamoeba castellanii str. Neff	14914482
ACA1_366550	mRNA	ACA1_366550	NW_004457343.1	451341	452441	R	ACA1_366550	complement(join(<451341..451578,451698..451891,451968..452029,452345..>452441))	Acanthamoeba castellanii str. Neff	14914483
ACA1_366560	mRNA	ACA1_366560	NW_004457343.1	453163	454672	R	ACA1_366560	complement(join(<453163..453301,453462..453604,453663..453760,453862..453955,454043..454146,454236..454344,454438..454527,454589..>454672))	Acanthamoeba castellanii str. Neff	14914484
ACA1_366570	mRNA	ACA1_366570	NW_004457343.1	454800	457167	R	ACA1_366570	complement(join(<454800..454922,455014..455121,455212..455333,455359..455519,455620..455699,455730..455835,455931..456056,456150..456227,456310..456335,456416..456532,456678..456838,456915..>457167))	Acanthamoeba castellanii str. Neff	14914485
ACA1_366580	mRNA	ACA1_366580	NW_004457343.1	457401	457826	D	ACA1_366580	<457401..>457826	Acanthamoeba castellanii str. Neff	14914486
ACA1_366590	mRNA	ACA1_366590	NW_004457343.1	457942	459891	R	ACA1_366590	complement(join(<457942..458138,458227..458361,458443..458584,458680..458831,458917..458958,459025..459139,459218..459307,459395..459483,459681..>459891))	Acanthamoeba castellanii str. Neff	14914487
ACA1_366600	mRNA	ACA1_366600	NW_004457343.1	460114	462367	D	ACA1_366600	join(<460114..460569,460651..460772,460857..460990,461099..461255,461331..461441,461527..461726,461794..462166,462244..>462367)	Acanthamoeba castellanii str. Neff	14914488
ACA1_366610	mRNA	ACA1_366610	NW_004457343.1	462544	463022	D	ACA1_366610	join(<462544..462725,462821..>463022)	Acanthamoeba castellanii str. Neff	14914489
ACA1_366620	mRNA	ACA1_366620	NW_004457343.1	464041	467662	R	ACA1_366620	complement(join(<464041..467106,467424..467495,467639..>467662))	Acanthamoeba castellanii str. Neff	14914553
ACA1_366630	mRNA	ACA1_366630	NW_004457343.1	468259	470989	D	ACA1_366630	join(<468259..468387,468516..468593,468694..469775,469898..470088,470340..470713,470834..>470989)	Acanthamoeba castellanii str. Neff	14914554
ACA1_366640	mRNA	ACA1_366640	NW_004457343.1	471216	472296	D	ACA1_366640	join(<471216..471842,471930..472117,472182..>472296)	Acanthamoeba castellanii str. Neff	14914555
ACA1_366650	mRNA	ACA1_366650	NW_004457343.1	472411	473323	R	ACA1_366650	complement(join(<472411..472589,472686..472974,473080..473231,473299..>473323))	Acanthamoeba castellanii str. Neff	14914556
ACA1_366660	mRNA	ACA1_366660	NW_004457343.1	473756	475375	R	ACA1_366660	complement(join(<473756..473977,474057..474418,474479..474745,474857..475146,475215..>475375))	Acanthamoeba castellanii str. Neff	14914557
ACA1_366670	mRNA	ACA1_366670	NW_004457343.1	475468	479106	R	ACA1_366670	complement(join(<475468..475746,475854..475940,476010..476380,476464..476531,476618..476745,476789..476959,477099..477128,477219..477659,477788..478031,478190..478414,478510..478635,478707..478759,478888..>479106))	Acanthamoeba castellanii str. Neff	14914558
ACA1_366680	mRNA	ACA1_366680	NW_004457343.1	479692	480239	D	ACA1_366680	join(<479692..480003,480097..480153,480195..>480239)	Acanthamoeba castellanii str. Neff	14914559
ACA1_366690	mRNA	ACA1_366690	NW_004457343.1	480252	482003	D	ACA1_366690	join(<480252..480349,480444..480521,480600..480719,480810..480892,480963..481090,481206..481294,481392..481553,481643..>482003)	Acanthamoeba castellanii str. Neff	14914560
ACA1_366700	mRNA	ACA1_366700	NW_004457343.1	482129	483820	R	ACA1_366700	complement(join(<482129..482965,483055..483687,483782..>483820))	Acanthamoeba castellanii str. Neff	14914561
ACA1_366710	mRNA	ACA1_366710	NW_004457343.1	484020	489784	R	ACA1_366710	complement(join(<484020..485144,485236..485352,485433..485753,485817..486050,486138..486323,486398..486674,486749..487116,487191..487460,487549..487662,487755..488167,488239..489060,489141..489522,489734..>489784))	Acanthamoeba castellanii str. Neff	14914562
ACA1_366720	mRNA	ACA1_366720	NW_004457343.1	489960	490538	R	ACA1_366720	complement(join(<489960..490135,490199..490270,490337..>490538))	Acanthamoeba castellanii str. Neff	14914563
ACA1_366730	mRNA	ACA1_366730	NW_004457343.1	490848	492401	R	ACA1_366730	complement(<490848..>492401)	Acanthamoeba castellanii str. Neff	14914564
ACA1_366740	mRNA	ACA1_366740	NW_004457343.1	493461	494703	D	ACA1_366740	join(<493461..493509,493609..493815,493902..494005,494284..494412,494503..>494703)	Acanthamoeba castellanii str. Neff	14914639
ACA1_366750	mRNA	ACA1_366750	NW_004457343.1	494796	497284	R	ACA1_366750	complement(join(<494796..495311,495446..495547,495651..495723,495797..496086,496155..496331,496424..496550,496632..496776,496858..496965,497032..>497284))	Acanthamoeba castellanii str. Neff	14914640
ACA1_366760	mRNA	ACA1_366760	NW_004457343.1	497369	498357	R	ACA1_366760	complement(join(<497369..497645,497712..497868,497938..498060,498126..498212,498282..>498357))	Acanthamoeba castellanii str. Neff	14914641
ACA1_366770	mRNA	ACA1_366770	NW_004457343.1	498631	503903	R	ACA1_366770	complement(join(<498631..498756,498819..498973,499051..499152,499225..499362,499439..499548,499636..499736,499799..499990,500062..500276,500312..500389,500485..500656,500776..500832,500899..501022,501108..501377,501454..501614,501675..501811,501885..502029,502097..502197,502228..502234,502318..502403,502482..502605,502682..503087,503161..503677,503759..>503903))	Acanthamoeba castellanii str. Neff	14914642
ACA1_366780	mRNA	ACA1_366780	NW_004457343.1	504812	505435	D	ACA1_366780	join(<504812..504860,504943..505022,505134..505207,505276..>505435)	Acanthamoeba castellanii str. Neff	14914643
ACA1_366890	mRNA	ACA1_366890	NW_004457343.1	506940	507671	R	ACA1_366890	complement(join(<506940..507526,507638..>507671))	Acanthamoeba castellanii str. Neff	14914644
ACA1_366900	mRNA	ACA1_366900	NW_004457343.1	508071	510730	D	ACA1_366900	join(<508071..508181,508203..508357,508435..508510,508634..508772,508844..508901,508978..509136,509223..509387,509553..509786,509885..510018,510118..510281,510368..>510730)	Acanthamoeba castellanii str. Neff	14914645
ACA1_366920	mRNA	ACA1_366920	NW_004457343.1	513923	516184	R	ACA1_366920	complement(join(<513923..514342,514445..514534,514653..514796,514870..514989,515084..515160,515390..515450,515555..515653,515812..516007,516129..>516184))	Acanthamoeba castellanii str. Neff	14914647
ACA1_366930	mRNA	ACA1_366930	NW_004457343.1	516436	518572	D	ACA1_366930	join(<516436..516501,516724..516828,516931..517092,517349..517428,517532..517614,517738..517898,518030..518102,518196..518317,518423..>518572)	Acanthamoeba castellanii str. Neff	14914648
ACA1_366940	mRNA	ACA1_366940	NW_004457343.1	518616	522282	R	ACA1_366940	complement(join(<518616..518913,519037..519166,519312..519853,519933..520029,520115..520165,520264..520374,520491..520646,520776..520870,520962..521022,521164..521274,521410..521564,521712..521802,521931..>522282))	Acanthamoeba castellanii str. Neff	14914649
ACA1_366950	mRNA	ACA1_366950	NW_004457343.1	522430	524249	R	ACA1_366950	complement(join(<522430..522814,523009..523213,523321..523847,523960..524184,524221..>524249))	Acanthamoeba castellanii str. Neff	14914501
ACA1_366960	mRNA	ACA1_366960	NW_004457343.1	524357	531678	R	ACA1_366960	complement(join(<524357..524452,524541..524700,524791..524942,525027..525232,525300..525508,525628..525761,525889..525904,526025..526085,526151..526268,526408..526581,526614..526747,526850..527008,527133..527473,527587..527767,527848..527927,528000..528091,528192..528465,528578..528752,528846..529023,529107..529325,529440..529623,529682..529785,529841..530021,530122..530245,530348..530461,530536..530596,530755..530928,531002..531054,531121..531180,531229..531489,531594..>531678))	Acanthamoeba castellanii str. Neff	14914502
ACA1_366970	mRNA	ACA1_366970	NW_004457343.1	533257	533570	D	ACA1_366970	join(<533257..533307,533388..>533570)	Acanthamoeba castellanii str. Neff	14914503
ACA1_366980	mRNA	ACA1_366980	NW_004457343.1	533796	536315	R	ACA1_366980	complement(join(<533796..533903,533998..534090,534178..534365,534447..534647,534725..534836,534906..535028,535093..535320,535402..535506,535591..535668,535735..535930,536026..>536315))	Acanthamoeba castellanii str. Neff	14914504
ACA1_366990	mRNA	ACA1_366990	NW_004457343.1	536833	539085	R	ACA1_366990	complement(join(<536833..536964,537058..537202,537272..537400,537440..537575,537669..537803,537892..537996,538089..538248,538326..538432,538532..538649,538760..538841,538919..539020,539075..>539085))	Acanthamoeba castellanii str. Neff	14914505
ACA1_367000	mRNA	ACA1_367000	NW_004457343.1	539627	545183	D	ACA1_367000	join(<539627..539701,539761..539908,539967..540048,540241..540251,540688..540737,540797..540944,541005..541086,541534..541668,541737..541796,541940..542027,542085..542160,542267..542343,542418..542539,542614..542843,542948..542963,543061..543200,543289..543436,543523..543585,543681..543844,543913..544036,544054..544067,544358..544444,544529..544633,544673..544794,544878..545001,545077..>545183)	Acanthamoeba castellanii str. Neff	14914506
ACA1_367110	mRNA	ACA1_367110	NW_004457343.1	545336	550441	R	ACA1_367110	complement(join(<545336..546682,546801..547029,547179..547280,547410..547452,547463..547528,547639..547770,547859..547979,548128..548236,548310..548494,548567..548682,548760..548847,548923..548979,549071..>550441))	Acanthamoeba castellanii str. Neff	14914507
ACA1_367120	mRNA	ACA1_367120	NW_004457343.1	550789	552667	R	ACA1_367120	complement(join(<550789..550883,550958..551039,551139..551313,551426..551564,551654..551756,551851..551952,552032..552115,552184..552306,552366..552484,552556..>552667))	Acanthamoeba castellanii str. Neff	14914508
ACA1_367130	mRNA	ACA1_367130	NW_004457343.1	552884	555170	D	ACA1_367130	join(<552884..552999,553079..553134,553198..553374,553448..553587,553669..553754,553840..553928,554071..554172,554260..554351,554414..554566,554641..554732,554809..554917,555018..>555170)	Acanthamoeba castellanii str. Neff	14914465
ACA1_367140	mRNA	ACA1_367140	NW_004457343.1	555678	555993	D	ACA1_367140	join(<555678..555924,555935..>555993)	Acanthamoeba castellanii str. Neff	14914466
ACA1_367150	mRNA	ACA1_367150	NW_004457343.1	556225	557759	R	ACA1_367150	complement(join(<556225..556253,556300..556436,556523..556752,556839..556945,557011..557093,557193..557362,557445..557591,557658..>557759))	Acanthamoeba castellanii str. Neff	14914467
ACA1_367160	mRNA	ACA1_367160	NW_004457343.1	558340	559453	D	ACA1_367160	join(<558340..558678,559145..>559453)	Acanthamoeba castellanii str. Neff	14914468
ACA1_367170	mRNA	ACA1_367170	NW_004457343.1	559617	559811	R	ACA1_367170	complement(<559617..>559811)	Acanthamoeba castellanii str. Neff	14914469
ACA1_367180	mRNA	ACA1_367180	NW_004457343.1	561722	565444	R	ACA1_367180	complement(join(<561722..561804,561865..562053,562116..562268,562321..562553,562775..562979,563061..563214,563309..563525,563595..564157,564241..564504,564813..564854,564876..564967,565034..565070,565137..565271,565331..>565444))	Acanthamoeba castellanii str. Neff	14914470
ACA1_367190	mRNA	ACA1_367190	NW_004457343.1	565769	569761	D	ACA1_367190	join(<565769..566363,566436..566524,566613..566867,566937..567059,567146..567325,567396..567653,567714..567834,567915..568041,568104..568229,568303..568566,568635..568698,568771..568855,568923..>569761)	Acanthamoeba castellanii str. Neff	14914471
ACA1_367200	mRNA	ACA1_367200	NW_004457343.1	570431	571101	D	ACA1_367200	join(<570431..570611,570679..570786,570856..570926,571000..>571101)	Acanthamoeba castellanii str. Neff	14914472
ACA1_367210	mRNA	ACA1_367210	NW_004457343.1	571275	572655	D	ACA1_367210	join(<571275..571294,571370..571538,571627..571788,571867..572155,572255..572338,572528..>572655)	Acanthamoeba castellanii str. Neff	14914473
ACA1_367220	mRNA	ACA1_367220	NW_004457343.1	573223	574001	D	ACA1_367220	join(<573223..573263,573286..573358,573421..573660,573724..573759,573822..>574001)	Acanthamoeba castellanii str. Neff	14914474
ACA1_367230	mRNA	ACA1_367230	NW_004457343.1	574383	575914	D	ACA1_367230	join(<574383..574395,574457..574508,574602..574618,574682..575328,575396..>575914)	Acanthamoeba castellanii str. Neff	14914475
ACA1_367240	mRNA	ACA1_367240	NW_004457343.1	576388	578339	D	ACA1_367240	join(<576388..576504,576516..576705,576765..577645,577658..577738,577755..>578339)	Acanthamoeba castellanii str. Neff	14914565
ACA1_367250	mRNA	ACA1_367250	NW_004457343.1	578229	580540	R	ACA1_367250	complement(join(<578229..578622,578691..578757,578817..578987,579075..579392,579462..579627,579676..579801,579860..580004,580064..580215,580277..>580540))	Acanthamoeba castellanii str. Neff	14914566
ACA1_367260	mRNA	ACA1_367260	NW_004457343.1	580756	582524	D	ACA1_367260	join(<580756..580896,580984..581166,581232..581366,581446..581590,581662..581755,581826..581916,582000..582122,582199..582303,582399..>582524)	Acanthamoeba castellanii str. Neff	14914567
ACA1_367270	mRNA	ACA1_367270	NW_004457343.1	582768	586776	D	ACA1_367270	join(<582768..583083,583207..583289,583371..583521,583609..583694,583784..583923,583999..584125,584253..584359,584449..584627,584711..584887,584976..585085,585175..585215,585292..586388,586478..>586776)	Acanthamoeba castellanii str. Neff	14914568
ACA1_367280	mRNA	ACA1_367280	NW_004457343.1	586941	588060	R	ACA1_367280	complement(join(<586941..586984,587061..587132,587219..587441,587518..587568,587668..587771,587881..587897,587996..>588060))	Acanthamoeba castellanii str. Neff	14914569
ACA1_367290	mRNA	ACA1_367290	NW_004457343.1	588227	592045	R	ACA1_367290	complement(join(<588227..588435,588531..589160,589235..589627,589724..589789,589891..589968,590057..590146,590253..590324,590421..590492,590714..590872,590964..591044,591151..591222,591323..591423,591516..591654,591931..>592045))	Acanthamoeba castellanii str. Neff	14914570
ACA1_367300	mRNA	ACA1_367300	NW_004457343.1	592494	594595	D	ACA1_367300	join(<592494..592615,592683..592784,592894..593092,593262..593334,593411..593540,593569..593763,593876..594011,594068..594187,594283..594415,594495..>594595)	Acanthamoeba castellanii str. Neff	14914571
ACA1_367310	mRNA	ACA1_367310	NW_004457343.1	594678	597969	R	ACA1_367310	complement(join(<594678..594949,594987..595398,595499..595886,595980..596383,596465..596556,596652..597006,597095..597334,597404..597531,597606..597708,597775..>597969))	Acanthamoeba castellanii str. Neff	14914572
ACA1_367320	mRNA	ACA1_367320	NW_004457343.1	598365	600368	R	ACA1_367320	complement(join(<598365..598489,598576..599028,599103..599263,599355..599546,599620..599875,599938..600128,600190..>600368))	Acanthamoeba castellanii str. Neff	14914573
ACA1_367330	mRNA	ACA1_367330	NW_004457343.1	600488	601876	R	ACA1_367330	complement(join(<600488..600640,600727..600818,600904..601321,601400..601588,601706..601767,601849..>601876))	Acanthamoeba castellanii str. Neff	14914574
ACA1_367340	mRNA	ACA1_367340	NW_004457343.1	603139	605541	D	ACA1_367340	join(<603139..603318,603408..603608,603674..603884,603904..604082,604167..604302,604371..604521,604596..604759,604854..605038,605111..605308,605389..>605541)	Acanthamoeba castellanii str. Neff	14914650
ACA1_367360	mRNA	ACA1_367360	NW_004457343.1	610581	614067	R	ACA1_367360	complement(join(<610581..610799,610899..611045,611123..611239,611333..611554,611639..611902,611979..612365,612538..612621,612704..612915,613035..613134,613235..613369,613433..613564,613661..613718,613793..>614067))	Acanthamoeba castellanii str. Neff	14914652
ACA1_367370	mRNA	ACA1_367370	NW_004457343.1	614265	616097	R	ACA1_367370	complement(join(<614265..614375,614474..614538,614602..614679,614758..614826,614899..614949,615024..615126,615188..615265,615354..615458,615525..615650,615720..615844,616061..>616097))	Acanthamoeba castellanii str. Neff	14914653
ACA1_367380	mRNA	ACA1_367380	NW_004457343.1	617397	619302	D	ACA1_367380	join(<617397..617570,617639..617888,617949..618070,618139..618542,618632..618807,618916..619003,619089..>619302)	Acanthamoeba castellanii str. Neff	14914654
ACA1_367390	mRNA	ACA1_367390	NW_004457343.1	619518	622016	D	ACA1_367390	join(<619518..619598,619665..619768,619847..619924,620014..620069,620181..620257,620335..620547,620621..620687,620773..620874,620945..621069,621149..621276,621388..621618,621785..>622016)	Acanthamoeba castellanii str. Neff	14914655
ACA1_367400	mRNA	ACA1_367400	NW_004457343.1	622168	625562	D	ACA1_367400	join(<622168..622186,622431..622473,622569..622709,622813..622921,623083..623129,623193..623386,623489..623572,623682..623828,623917..624396,624495..624606,624949..625022,625111..625223,625347..>625562)	Acanthamoeba castellanii str. Neff	14914656
ACA1_367410	mRNA	ACA1_367410	NW_004457343.1	625667	628485	R	ACA1_367410	complement(join(<625667..625807,625891..626008,626112..626187,626283..626320,626401..626647,626773..626860,626928..627044,627133..627260,627383..627539,627637..627723,627806..628287,628347..>628485))	Acanthamoeba castellanii str. Neff	14914657
ACA1_367420	mRNA	ACA1_367420	NW_004457343.1	628899	631234	R	ACA1_367420	complement(join(<628899..629776,629853..629907,629990..630067,630146..630199,630401..630478,630537..630808,630906..631044,631109..>631234))	Acanthamoeba castellanii str. Neff	14914658
ACA1_367430	mRNA	ACA1_367430	NW_004457343.1	631879	633322	D	ACA1_367430	join(<631879..631983,632059..632173,632235..632353,632429..632587,632649..632747,632939..>633322)	Acanthamoeba castellanii str. Neff	14914659
ACA1_367440	mRNA	ACA1_367440	NW_004457343.1	633419	633842	R	ACA1_367440	complement(join(<633419..633678,633770..>633842))	Acanthamoeba castellanii str. Neff	14914681
ACA1_367550	mRNA	ACA1_367550	NW_004457343.1	638226	638454	D	ACA1_367550	join(<638226..638256,638330..>638454)	Acanthamoeba castellanii str. Neff	14914682
ACA1_075950	mRNA	ACA1_075950	NW_004457342.1	1049	1657	D	ACA1_075950	join(<1049..1395,1582..>1657)	Acanthamoeba castellanii str. Neff	14914376
ACA1_076060	mRNA	ACA1_076060	NW_004457342.1	1616	1914	R	ACA1_076060	complement(join(<1616..1642,1715..1749,1773..>1914))	Acanthamoeba castellanii str. Neff	14914365
ACA1_076070	mRNA	ACA1_076070	NW_004457342.1	2258	3020	D	ACA1_076070	join(<2258..2359,2427..2494,2562..2665,2737..2798,2889..>3020)	Acanthamoeba castellanii str. Neff	14914366
ACA1_076080	mRNA	ACA1_076080	NW_004457342.1	3758	4891	D	ACA1_076080	join(<3758..4766,4845..>4891)	Acanthamoeba castellanii str. Neff	14914377
ACA1_076090	mRNA	ACA1_076090	NW_004457342.1	5209	5914	D	ACA1_076090	join(<5209..5353,5415..5539,5600..5724,5794..>5914)	Acanthamoeba castellanii str. Neff	14914378
ACA1_076100	mRNA	ACA1_076100	NW_004457342.1	6181	7044	D	ACA1_076100	join(<6181..6322,6476..6576,6658..6782,6918..>7044)	Acanthamoeba castellanii str. Neff	14914379
ACA1_076110	mRNA	ACA1_076110	NW_004457342.1	7183	8255	R	ACA1_076110	complement(join(<7183..7236,7463..7609,7689..7801,7932..8030,8126..>8255))	Acanthamoeba castellanii str. Neff	14914380
ACA1_076120	mRNA	ACA1_076120	NW_004457342.1	9117	12618	D	ACA1_076120	join(<9117..9240,9343..9773,9878..10079,10207..10316,10401..10469,10549..10654,10735..10835,10942..11149,11238..11314,11454..11560,11644..11904,12010..12093,12273..>12618)	Acanthamoeba castellanii str. Neff	14914323
ACA1_076130	mRNA	ACA1_076130	NW_004457342.1	13066	14970	D	ACA1_076130	join(<13066..13517,13603..13673,13734..13835,13961..14187,14314..14383,14603..14703,14794..>14970)	Acanthamoeba castellanii str. Neff	14914324
ACA1_076140	mRNA	ACA1_076140	NW_004457342.1	15118	15578	D	ACA1_076140	join(<15118..15162,15234..>15578)	Acanthamoeba castellanii str. Neff	14914325
ACA1_076150	mRNA	ACA1_076150	NW_004457342.1	15802	16779	R	ACA1_076150	complement(join(<15802..15883,16038..16121,16199..>16779))	Acanthamoeba castellanii str. Neff	14914326
ACA1_076160	mRNA	ACA1_076160	NW_004457342.1	17168	19390	D	ACA1_076160	join(<17168..17458,17604..17889,17971..18094,18218..18411,18514..18651,18755..19008,19076..>19390)	Acanthamoeba castellanii str. Neff	14914327
ACA1_076170	mRNA	ACA1_076170	NW_004457342.1	19469	22198	D	ACA1_076170	join(<19469..19500,19519..19884,20014..20108,20187..20492,20591..20788,20866..21241,21335..21435,21518..21778,21864..>22198)	Acanthamoeba castellanii str. Neff	14914328
ACA1_076180	mRNA	ACA1_076180	NW_004457342.1	22538	22999	R	ACA1_076180	complement(<22538..>22999)	Acanthamoeba castellanii str. Neff	14914329
ACA1_076190	mRNA	ACA1_076190	NW_004457342.1	23375	23911	D	ACA1_076190	join(<23375..23462,23565..23677,23750..>23911)	Acanthamoeba castellanii str. Neff	14914413
ACA1_076200	mRNA	ACA1_076200	NW_004457342.1	24036	25190	R	ACA1_076200	complement(join(<24036..24160,24240..24325,24400..24507,24591..24668,24745..24788,24915..25014,25099..>25190))	Acanthamoeba castellanii str. Neff	14914414
ACA1_076210	mRNA	ACA1_076210	NW_004457342.1	25311	27738	R	ACA1_076210	complement(join(<25311..25454,25562..25673,25750..25919,26024..26158,26245..26292,26380..26435,26525..26646,26723..26870,26929..27038,27111..27213,27296..27383,27449..27510,27699..>27738))	Acanthamoeba castellanii str. Neff	14914415
ACA1_076220	mRNA	ACA1_076220	NW_004457342.1	27915	29530	D	ACA1_076220	join(<27915..27980,28067..28216,28315..28391,28462..28525,28657..28705,28782..28884,28958..29057,29132..29232,29290..29359,29417..>29530)	Acanthamoeba castellanii str. Neff	14914416
ACA1_076230	mRNA	ACA1_076230	NW_004457342.1	30254	38434	D	ACA1_076230	join(<30254..30301,30450..30753,30769..30821,30855..30884,30925..31025,31117..31216,31282..31366,31449..31698,31785..31877,31983..32123,32190..32420,32516..32623,32725..32905,32982..33187,33297..33454,33544..33759,33888..34321,34411..34522,34620..34725,34794..35004,35082..35214,35303..35435,35531..35712,35793..35915,35987..36183,36286..36466,36555..36666,36771..36923,37033..37380,37562..37655,37772..37849,37952..38062,38171..>38434)	Acanthamoeba castellanii str. Neff	14914417
ACA1_076240	mRNA	ACA1_076240	NW_004457342.1	38750	41110	D	ACA1_076240	join(<38750..38855,38967..39079,39164..39326,39404..39485,39600..39765,39858..39982,40083..40160,40281..40336,40434..40534,40652..40878,40993..>41110)	Acanthamoeba castellanii str. Neff	14914418
ACA1_076250	mRNA	ACA1_076250	NW_004457342.1	41230	43040	D	ACA1_076250	join(<41230..41463,41495..42859,42930..>43040)	Acanthamoeba castellanii str. Neff	14914419
ACA1_076260	mRNA	ACA1_076260	NW_004457342.1	44521	46413	D	ACA1_076260	join(<44521..44598,44677..44735,44875..45036,45122..45224,45326..45425,45495..45597,45690..45798,45920..46061,46143..46288,46384..>46413)	Acanthamoeba castellanii str. Neff	14914420
ACA1_076370	mRNA	ACA1_076370	NW_004457342.1	50525	51031	D	ACA1_076370	join(<50525..50668,50804..>51031)	Acanthamoeba castellanii str. Neff	14914421
ACA1_076380	mRNA	ACA1_076380	NW_004457342.1	51962	54091	D	ACA1_076380	join(<51962..52114,52577..52807,52866..52962,53091..53181,53941..>54091)	Acanthamoeba castellanii str. Neff	14914422
ACA1_076390	mRNA	ACA1_076390	NW_004457342.1	54600	64436	D	ACA1_076390	join(<54600..54672,54804..55237,55299..55517,55629..56126,56241..56405,56552..56760,56841..57072,57172..57335,57443..57542,57608..57731,57833..57990,58065..58236,58323..58421,58517..58665,58699..58905,58978..59061,59172..59261,59350..59455,59527..59697,59791..59952,60038..60160,60302..60675,60752..60911,61002..61176,61252..61369,61439..61570,61650..61743,61845..62157,62177..62357,62461..62610,62719..63379,63449..63556,63637..63764,63875..64150,64230..>64436)	Acanthamoeba castellanii str. Neff	14914423
ACA1_076400	mRNA	ACA1_076400	NW_004457342.1	65018	65419	D	ACA1_076400	join(<65018..65050,65186..>65419)	Acanthamoeba castellanii str. Neff	14914424
ACA1_076410	mRNA	ACA1_076410	NW_004457342.1	65773	66275	R	ACA1_076410	complement(join(<65773..65834,65872..65957,66060..66157,66240..>66275))	Acanthamoeba castellanii str. Neff	14914425
ACA1_076420	mRNA	ACA1_076420	NW_004457342.1	66504	67793	D	ACA1_076420	join(<66504..66595,66693..66750,66819..66929,67013..67094,67216..67277,67394..67513,67595..67649,67744..>67793)	Acanthamoeba castellanii str. Neff	14914426
ACA1_076430	mRNA	ACA1_076430	NW_004457342.1	67894	69305	R	ACA1_076430	complement(join(<67894..68585,68678..68862,68976..69060,69131..>69305))	Acanthamoeba castellanii str. Neff	14914427
ACA1_076440	mRNA	ACA1_076440	NW_004457342.1	69608	70620	R	ACA1_076440	complement(join(<69608..69942,70057..70239,70347..70472,70563..>70620))	Acanthamoeba castellanii str. Neff	14914428
ACA1_076450	mRNA	ACA1_076450	NW_004457342.1	71167	71592	D	ACA1_076450	<71167..>71592	Acanthamoeba castellanii str. Neff	14914429
ACA1_076460	mRNA	ACA1_076460	NW_004457342.1	72523	73397	D	ACA1_076460	join(<72523..72650,72675..72762,73269..>73397)	Acanthamoeba castellanii str. Neff	14914430
ACA1_076470	mRNA	ACA1_076470	NW_004457342.1	73497	74108	R	ACA1_076470	complement(<73497..>74108)	Acanthamoeba castellanii str. Neff	14914431
ACA1_076480	mRNA	ACA1_076480	NW_004457342.1	77561	77997	R	ACA1_076480	complement(join(<77561..77757,77850..>77997))	Acanthamoeba castellanii str. Neff	14914432
ACA1_076490	mRNA	ACA1_076490	NW_004457342.1	80056	80482	D	ACA1_076490	join(<80056..80243,80290..>80482)	Acanthamoeba castellanii str. Neff	14914433
ACA1_076500	mRNA	ACA1_076500	NW_004457342.1	80833	83716	R	ACA1_076500	complement(join(<80833..80996,81095..81158,81238..81361,81438..81484,81672..81752,81834..81911,81961..82047,82117..82244,82317..82374,82462..82555,82641..82748,82844..82910,82986..83058,83133..83222,83300..83337,83426..83525,83624..>83716))	Acanthamoeba castellanii str. Neff	14914434
ACA1_076510	mRNA	ACA1_076510	NW_004457342.1	84807	85610	D	ACA1_076510	join(<84807..85039,85119..85483,85597..>85610)	Acanthamoeba castellanii str. Neff	14914435
ACA1_076520	mRNA	ACA1_076520	NW_004457342.1	85762	86037	R	ACA1_076520	complement(join(<85762..85824,85873..>86037))	Acanthamoeba castellanii str. Neff	14914436
ACA1_076530	mRNA	ACA1_076530	NW_004457342.1	88100	88724	D	ACA1_076530	join(<88100..88297,88335..>88724)	Acanthamoeba castellanii str. Neff	14914437
ACA1_076540	mRNA	ACA1_076540	NW_004457342.1	88711	91497	R	ACA1_076540	complement(<88711..>91497)	Acanthamoeba castellanii str. Neff	14914438
ACA1_076550	mRNA	ACA1_076550	NW_004457342.1	92183	93129	D	ACA1_076550	join(<92183..92441,92715..92847,92913..>93129)	Acanthamoeba castellanii str. Neff	14914439
ACA1_076560	mRNA	ACA1_076560	NW_004457342.1	93439	93966	R	ACA1_076560	complement(join(<93439..93646,93671..>93966))	Acanthamoeba castellanii str. Neff	14914339
ACA1_076570	mRNA	ACA1_076570	NW_004457342.1	95032	96792	R	ACA1_076570	complement(join(<95032..96532,96548..96669,96697..>96792))	Acanthamoeba castellanii str. Neff	14914340
ACA1_076580	mRNA	ACA1_076580	NW_004457342.1	97015	98172	R	ACA1_076580	complement(<97015..>98172)	Acanthamoeba castellanii str. Neff	14914341
ACA1_076590	mRNA	ACA1_076590	NW_004457342.1	98433	99200	R	ACA1_076590	complement(<98433..>99200)	Acanthamoeba castellanii str. Neff	14914342
ACA1_076600	mRNA	ACA1_076600	NW_004457342.1	99672	100032	D	ACA1_076600	join(<99672..99825,99911..>100032)	Acanthamoeba castellanii str. Neff	14914343
ACA1_076610	mRNA	ACA1_076610	NW_004457342.1	100399	101650	R	ACA1_076610	complement(join(<100399..100994,101206..>101650))	Acanthamoeba castellanii str. Neff	14914344
ACA1_076620	mRNA	ACA1_076620	NW_004457342.1	101667	101951	R	ACA1_076620	complement(<101667..>101951)	Acanthamoeba castellanii str. Neff	14914345
ACA1_076630	mRNA	ACA1_076630	NW_004457342.1	102598	103825	R	ACA1_076630	complement(join(<102598..102620,102655..>103825))	Acanthamoeba castellanii str. Neff	14914346
ACA1_076640	mRNA	ACA1_076640	NW_004457342.1	105007	105484	D	ACA1_076640	join(<105007..105123,105185..>105484)	Acanthamoeba castellanii str. Neff	14914347
ACA1_076650	mRNA	ACA1_076650	NW_004457342.1	106360	107407	R	ACA1_076650	complement(join(<106360..106875,107021..>107407))	Acanthamoeba castellanii str. Neff	14914348
ACA1_076660	mRNA	ACA1_076660	NW_004457342.1	108764	109183	R	ACA1_076660	complement(<108764..>109183)	Acanthamoeba castellanii str. Neff	14914349
ACA1_076670	mRNA	ACA1_076670	NW_004457342.1	110406	110907	D	ACA1_076670	join(<110406..110722,110868..>110907)	Acanthamoeba castellanii str. Neff	14914350
ACA1_076680	mRNA	ACA1_076680	NW_004457342.1	116312	117264	D	ACA1_076680	join(<116312..116404,116455..>117264)	Acanthamoeba castellanii str. Neff	14914351
ACA1_076690	mRNA	ACA1_076690	NW_004457342.1	118023	118280	R	ACA1_076690	complement(join(<118023..118118,118137..>118280))	Acanthamoeba castellanii str. Neff	14914352
ACA1_076700	mRNA	ACA1_076700	NW_004457342.1	119466	120187	D	ACA1_076700	join(<119466..119566,119618..119696,120152..>120187)	Acanthamoeba castellanii str. Neff	14914353
ACA1_076710	mRNA	ACA1_076710	NW_004457342.1	120030	120443	R	ACA1_076710	complement(<120030..>120443)	Acanthamoeba castellanii str. Neff	14914354
ACA1_076720	mRNA	ACA1_076720	NW_004457342.1	121680	122912	R	ACA1_076720	complement(join(<121680..121725,121814..121950,122025..122228,122280..122428,122514..122646,122760..>122912))	Acanthamoeba castellanii str. Neff	14914355
ACA1_076730	mRNA	ACA1_076730	NW_004457342.1	124048	124704	D	ACA1_076730	<124048..>124704	Acanthamoeba castellanii str. Neff	14914356
ACA1_076740	mRNA	ACA1_076740	NW_004457342.1	124926	128062	D	ACA1_076740	join(<124926..125117,125233..125371,125459..125594,125705..125745,125819..125903,125982..126086,126160..126257,126357..126493,126745..126819,126912..127019,127194..127309,127402..127654,127847..>128062)	Acanthamoeba castellanii str. Neff	14914357
ACA1_076750	mRNA	ACA1_076750	NW_004457342.1	128577	128903	D	ACA1_076750	<128577..>128903	Acanthamoeba castellanii str. Neff	14914358
ACA1_076760	mRNA	ACA1_076760	NW_004457342.1	129216	131702	R	ACA1_076760	complement(join(<129216..129439,129559..129980,130131..130299,130411..131079,131173..131353,131580..>131702))	Acanthamoeba castellanii str. Neff	14914359
ACA1_076770	mRNA	ACA1_076770	NW_004457342.1	132334	140175	D	ACA1_076770	join(<132334..132348,132438..132510,132647..132780,132866..132949,133234..133303,133385..133458,133537..133666,133715..133918,134002..134137,134207..134306,134387..134558,134651..134711,134815..135760,135844..135909,136013..136285,136393..136465,136537..136619,136730..137245,137340..137450,137525..137624,137735..138161,138247..138926,139045..139097,139195..139275,139360..>140175)	Acanthamoeba castellanii str. Neff	14914360
ACA1_076780	mRNA	ACA1_076780	NW_004457342.1	140231	143908	R	ACA1_076780	complement(join(<140231..140545,140651..140800,140899..140967,141183..141532,141705..141784,141894..141974,142075..142149,142241..142383,142533..142787,142901..142961,143043..143130,143209..143404,143499..143568,143661..143721,143851..>143908))	Acanthamoeba castellanii str. Neff	14914361
ACA1_076790	mRNA	ACA1_076790	NW_004457342.1	143970	148592	R	ACA1_076790	complement(join(<143970..144212,144316..145235,145313..145519,145605..145909,145985..146144,146233..146329,146406..146505,146581..146849,146955..147154,147238..147448,147546..147688,147811..147922,148012..148137,148257..148364,148461..>148592))	Acanthamoeba castellanii str. Neff	14914362
ACA1_076800	mRNA	ACA1_076800	NW_004457342.1	149417	153218	D	ACA1_076800	join(<149417..149443,149527..149590,149652..149726,149788..149856,149943..150053,150143..150273,150362..150463,150529..150661,150742..150842,150958..151108,151198..151285,151358..151448,151521..151790,151919..152011,152100..152169,152250..152332,152595..152751,152845..152997,153082..>153218)	Acanthamoeba castellanii str. Neff	14914363
ACA1_076810	mRNA	ACA1_076810	NW_004457342.1	153397	155130	D	ACA1_076810	join(<153397..154173,154295..154463,154584..154714,154816..154948,155105..>155130)	Acanthamoeba castellanii str. Neff	14914364
ACA1_076820	mRNA	ACA1_076820	NW_004457342.1	155382	163776	R	ACA1_076820	complement(join(<155382..155680,155761..155860,155952..156157,156335..156503,156591..156717,156827..157149,157282..157527,157602..157792,158122..158324,158414..158486,158572..158719,158897..158963,159033..159218,159539..159598,159701..159788,159891..160031,160195..160298,160402..160441,160749..160885,160977..161071,161156..161365,161464..161564,161693..161809,161911..162067,162171..162298,162378..162558,162699..162854,162928..163081,163156..163261,163339..163463,163534..163609,163713..>163776))	Acanthamoeba castellanii str. Neff	14914330
ACA1_076830	mRNA	ACA1_076830	NW_004457342.1	163993	164707	R	ACA1_076830	complement(join(<163993..164101,164254..164358,164439..>164707))	Acanthamoeba castellanii str. Neff	14914331
ACA1_076840	mRNA	ACA1_076840	NW_004457342.1	165290	166220	D	ACA1_076840	join(<165290..165370,165510..165606,165688..165805,165880..166022,166111..>166220)	Acanthamoeba castellanii str. Neff	14914332
ACA1_076850	mRNA	ACA1_076850	NW_004457342.1	166448	167678	D	ACA1_076850	join(<166448..166562,166640..166733,166822..167040,167111..167208,167286..167557,167622..>167678)	Acanthamoeba castellanii str. Neff	14914333
ACA1_076860	mRNA	ACA1_076860	NW_004457342.1	167890	169690	D	ACA1_076860	join(<167890..168112,168211..168311,168410..168490,168614..169147,169247..169319,169394..169477,169494..>169690)	Acanthamoeba castellanii str. Neff	14914334
ACA1_076870	mRNA	ACA1_076870	NW_004457342.1	170534	171511	D	ACA1_076870	join(<170534..170728,170963..>171511)	Acanthamoeba castellanii str. Neff	14914335
ACA1_076880	mRNA	ACA1_076880	NW_004457342.1	172519	175383	D	ACA1_076880	<172519..>175383	Acanthamoeba castellanii str. Neff	14914336
ACA1_076890	mRNA	ACA1_076890	NW_004457342.1	175803	179218	D	ACA1_076890	join(<175803..175854,175940..176050,176267..176450,176555..176645,176950..177055,177170..177253,177348..177457,177567..177656,177735..177962,177983..178106,178196..178279,178400..178523,178596..178778,178873..179001,179098..>179218)	Acanthamoeba castellanii str. Neff	14914337
ACA1_076900	mRNA	ACA1_076900	NW_004457342.1	179519	181741	D	ACA1_076900	<179519..>181741	Acanthamoeba castellanii str. Neff	14914338
ACA1_076910	mRNA	ACA1_076910	NW_004457342.1	181927	183339	R	ACA1_076910	complement(join(<181927..182000,182067..182149,182246..182330,182437..182550,182783..182891,183019..183089,183219..>183339))	Acanthamoeba castellanii str. Neff	14914393
ACA1_076920	mRNA	ACA1_076920	NW_004457342.1	183747	186581	R	ACA1_076920	complement(join(<183747..184039,184137..184234,184383..184478,184591..184670,184780..184912,185027..185088,185207..185275,185413..185499,185637..185887,185981..>186581))	Acanthamoeba castellanii str. Neff	14914394
ACA1_076930	mRNA	ACA1_076930	NW_004457342.1	187160	195602	D	ACA1_076930	join(<187160..187198,187308..187351,187461..187581,187665..187781,187873..188007,188119..188205,188319..188414,188492..188547,188633..188717,188812..188876,188958..189110,189193..189292,189368..189462,189539..189577,189666..189763,189925..190069,190106..190217,190302..190385,190532..190573,190607..190706,190792..190963,191046..191142,191238..191341,191422..191506,191581..191661,191727..191886,191988..192365,192462..192534,192631..192802,192868..192977,193131..193221,193308..193391,193493..193576,193684..193741,193845..193962,194082..194252,194368..194487,194552..194675,194783..194930,195088..195183,195258..195396,195509..>195602)	Acanthamoeba castellanii str. Neff	14914395
ACA1_076940	mRNA	ACA1_076940	NW_004457342.1	195673	195930	R	ACA1_076940	complement(<195673..>195930)	Acanthamoeba castellanii str. Neff	14914396
ACA1_076950	mRNA	ACA1_076950	NW_004457342.1	196344	199316	R	ACA1_076950	complement(join(<196344..198969,199106..199226,199310..>199316))	Acanthamoeba castellanii str. Neff	14914397
ACA1_076960	mRNA	ACA1_076960	NW_004457342.1	200072	202609	R	ACA1_076960	complement(join(<200072..202108,202571..>202609))	Acanthamoeba castellanii str. Neff	14914398
ACA1_076970	mRNA	ACA1_076970	NW_004457342.1	203734	205804	R	ACA1_076970	complement(join(<203734..203802,203894..204023,204141..204201,204318..204380,204447..204512,204597..204811,204913..205006,205080..205164,205254..205320,205452..>205804))	Acanthamoeba castellanii str. Neff	14914399
ACA1_076980	mRNA	ACA1_076980	NW_004457342.1	206334	208904	D	ACA1_076980	join(<206334..206388,206509..206679,206787..206922,207039..207126,207231..207337,207416..207509,207598..207721,207793..207887,207989..208047,208133..208214,208300..208397,208467..208526,208601..208670,208761..>208904)	Acanthamoeba castellanii str. Neff	14914400
ACA1_076990	mRNA	ACA1_076990	NW_004457342.1	209036	210758	R	ACA1_076990	complement(join(<209036..209575,209657..209772,209853..209958,210047..210170,210277..210356,210440..210505,210612..>210758))	Acanthamoeba castellanii str. Neff	14914401
ACA1_077000	mRNA	ACA1_077000	NW_004457342.1	210885	211217	D	ACA1_077000	<210885..>211217	Acanthamoeba castellanii str. Neff	14914402
ACA1_077010	mRNA	ACA1_077010	NW_004457342.1	211266	211841	R	ACA1_077010	complement(<211266..>211841)	Acanthamoeba castellanii str. Neff	14914403
ACA1_077020	mRNA	ACA1_077020	NW_004457342.1	212144	215798	D	ACA1_077020	join(<212144..212382,212493..212596,212685..212770,212788..212989,213065..213174,213244..213362,213440..213557,213643..213788,213927..214029,214126..214243,214315..214420,214497..214706,214781..214881,214975..215029,215101..215248,215322..215408,215504..215588,215698..>215798)	Acanthamoeba castellanii str. Neff	14914404
ACA1_077030	mRNA	ACA1_077030	NW_004457342.1	215981	218619	R	ACA1_077030	complement(join(<215981..216701,216761..216842,216949..217028,217081..217189,217256..217380,217447..217762,217833..217972,218049..218168,218242..218344,218410..218448,218541..>218619))	Acanthamoeba castellanii str. Neff	14914405
ACA1_077050	mRNA	ACA1_077050	NW_004457342.1	223731	224453	R	ACA1_077050	complement(join(<223731..223896,223995..224076,224200..224370,224435..>224453))	Acanthamoeba castellanii str. Neff	14914407
ACA1_077060	mRNA	ACA1_077060	NW_004457342.1	224944	226222	R	ACA1_077060	complement(join(<224944..225102,225185..225267,225340..225724,225884..226029,226138..>226222))	Acanthamoeba castellanii str. Neff	14914408
ACA1_077070	mRNA	ACA1_077070	NW_004457342.1	226493	226943	R	ACA1_077070	complement(join(<226493..226558,226573..226779,226890..>226943))	Acanthamoeba castellanii str. Neff	14914409
ACA1_077080	mRNA	ACA1_077080	NW_004457342.1	227049	231830	R	ACA1_077080	complement(join(<227049..227171,227314..227367,227469..227639,227758..227924,228014..228144,228226..228529,228619..228739,228815..230020,230107..230286,230415..230552,230651..230772,230847..230952,231013..231114,231212..231283,231550..231684,231801..>231830))	Acanthamoeba castellanii str. Neff	14914410
ACA1_077090	mRNA	ACA1_077090	NW_004457342.1	232290	235356	R	ACA1_077090	complement(join(<232290..232357,232515..232636,232703..232796,232861..233073,233146..233224,233305..233417,233487..233666,233737..233837,233931..234064,234147..234299,234380..234507,234625..234714,234789..234854,234929..235055,235249..>235356))	Acanthamoeba castellanii str. Neff	14914411
ACA1_077100	mRNA	ACA1_077100	NW_004457342.1	235773	236757	R	ACA1_077100	complement(join(<235773..235899,235986..236094,236205..236313,236376..236462,236543..236568,236661..>236757))	Acanthamoeba castellanii str. Neff	14914412
ACA1_077110	mRNA	ACA1_077110	NW_004457342.1	237493	238652	R	ACA1_077110	complement(join(<237493..237535,237620..237912,237981..238372,238442..>238652))	Acanthamoeba castellanii str. Neff	14914381
ACA1_077120	mRNA	ACA1_077120	NW_004457342.1	238931	244861	R	ACA1_077120	complement(join(<238931..239041,239137..239256,239327..239410,239493..239558,239637..239999,240089..240145,240250..240326,240405..240474,240592..240753,240855..240991,241118..241213,241299..241443,241571..241678,241830..241976,242130..242234,242321..242395,242504..242623,242705..242781,242863..243108,243212..243899,244157..>244861))	Acanthamoeba castellanii str. Neff	14914382
ACA1_077130	mRNA	ACA1_077130	NW_004457342.1	245506	247948	R	ACA1_077130	complement(join(<245506..247698,247778..>247948))	Acanthamoeba castellanii str. Neff	14914383
ACA1_077140	mRNA	ACA1_077140	NW_004457342.1	248473	249723	R	ACA1_077140	complement(join(<248473..248562,248694..248773,248846..248960,249053..249121,249244..249382,249482..>249723))	Acanthamoeba castellanii str. Neff	14914384
ACA1_077150	mRNA	ACA1_077150	NW_004457342.1	250061	251554	D	ACA1_077150	join(<250061..250147,250283..250447,250712..250829,250924..251006,251108..251223,251345..251420,251531..>251554)	Acanthamoeba castellanii str. Neff	14914385
ACA1_077160	mRNA	ACA1_077160	NW_004457342.1	251869	253371	D	ACA1_077160	join(<251869..251922,252050..252123,252216..252309,252436..>253371)	Acanthamoeba castellanii str. Neff	14914386
ACA1_077170	mRNA	ACA1_077170	NW_004457342.1	253429	254327	R	ACA1_077170	complement(join(<253429..253665,253775..254047,254253..>254327))	Acanthamoeba castellanii str. Neff	14914387
ACA1_077180	mRNA	ACA1_077180	NW_004457342.1	254474	255444	R	ACA1_077180	complement(join(<254474..254655,254749..254800,254916..254959,255033..255201,255283..>255444))	Acanthamoeba castellanii str. Neff	14914388
ACA1_077190	mRNA	ACA1_077190	NW_004457342.1	255577	257924	D	ACA1_077190	join(<255577..256044,256266..256380,256460..256584,256800..257062,257305..257408,257472..257569,257667..>257924)	Acanthamoeba castellanii str. Neff	14914389
ACA1_077200	mRNA	ACA1_077200	NW_004457342.1	258136	259331	R	ACA1_077200	complement(join(<258136..258211,258450..258684,258874..258919,259023..>259331))	Acanthamoeba castellanii str. Neff	14914390
ACA1_077210	mRNA	ACA1_077210	NW_004457342.1	260456	260923	R	ACA1_077210	complement(<260456..>260923)	Acanthamoeba castellanii str. Neff	14914391
ACA1_077220	mRNA	ACA1_077220	NW_004457342.1	261386	262084	R	ACA1_077220	complement(<261386..>262084)	Acanthamoeba castellanii str. Neff	14914392
ACA1_077230	mRNA	ACA1_077230	NW_004457342.1	262620	263337	R	ACA1_077230	complement(join(<262620..262725,262804..262847,262942..>263337))	Acanthamoeba castellanii str. Neff	14914367
ACA1_077240	mRNA	ACA1_077240	NW_004457342.1	263751	266022	D	ACA1_077240	join(<263751..263953,264203..264280,264418..264552,264617..264719,264812..264868,264959..265028,265108..265166,265254..265385,265555..265618,265695..265823,265895..>266022)	Acanthamoeba castellanii str. Neff	14914368
ACA1_077250	mRNA	ACA1_077250	NW_004457342.1	266255	270970	D	ACA1_077250	join(<266255..266706,266775..267141,267225..267401,267483..267551,267658..268270,268360..268484,268573..268757,268836..269017,269104..269329,269403..269469,269554..269730,269839..269925,270002..270233,270327..270494,270588..270738,270820..>270970)	Acanthamoeba castellanii str. Neff	14914369
ACA1_077260	mRNA	ACA1_077260	NW_004457342.1	271561	274073	R	ACA1_077260	complement(join(<271561..272134,272158..272393,272448..272484,272547..272659,272769..272890,272967..273081,273173..273259,273330..>274073))	Acanthamoeba castellanii str. Neff	14914370
ACA1_077270	mRNA	ACA1_077270	NW_004457342.1	274689	277032	D	ACA1_077270	join(<274689..275002,275146..276056,276157..276287,276377..276560,276651..276854,276932..>277032)	Acanthamoeba castellanii str. Neff	14914371
ACA1_077280	mRNA	ACA1_077280	NW_004457342.1	277519	279119	D	ACA1_077280	join(<277519..277654,277728..277774,277840..277984,278075..278171,278250..278351,278443..278542,278631..278705,278800..278893,278959..>279119)	Acanthamoeba castellanii str. Neff	14914372
ACA1_077290	mRNA	ACA1_077290	NW_004457342.1	279607	284229	D	ACA1_077290	join(<279607..282012,282112..>284229)	Acanthamoeba castellanii str. Neff	14914373
ACA1_077300	mRNA	ACA1_077300	NW_004457342.1	285483	292460	D	ACA1_077300	join(<285483..285504,285698..285912,286065..286189,286280..286439,286522..286678,286775..287216,287305..287395,287462..287557,287644..287716,287785..287843,287945..288038,288134..288464,288557..288623,288783..288872,288974..289354,289407..289586,289684..289880,289953..290168,290255..291119,291228..291332,291369..291773,291871..292009,292082..292280,292364..>292460)	Acanthamoeba castellanii str. Neff	14914374
ACA1_077310	mRNA	ACA1_077310	NW_004457342.1	292917	294809	D	ACA1_077310	join(<292917..292970,293000..293266,293439..>294809)	Acanthamoeba castellanii str. Neff	14914375
ACA1_316750	mRNA	ACA1_316750	NW_004457341.1	167	5015	D	ACA1_316750	join(<167..224,366..587,727..974,1097..1384,1465..1701,1833..2028,2281..2582,2681..2781,2875..2957,3026..3083,3154..3226,3296..3533,3605..3744,3846..3939,4036..4117,4202..4277,4356..4419,4549..4699,4781..>5015)	Acanthamoeba castellanii str. Neff	14914322
ACA1_316960	mRNA	ACA1_316960	NW_004457341.1	7875	10413	R	ACA1_316960	complement(join(<7875..7959,8053..8171,8261..8324,8483..8592,8726..8878,8942..9039,9155..9206,9283..9366,9506..9602,9692..9843,10009..10114,10264..>10413))	Acanthamoeba castellanii str. Neff	14914321
ACA1_317070	mRNA	ACA1_317070	NW_004457341.1	10961	12323	R	ACA1_317070	complement(join(<10961..11817,11935..12055,12222..>12323))	Acanthamoeba castellanii str. Neff	14914320
ACA1_014350	mRNA	ACA1_014350	NW_004457340.1	35	1822	R	ACA1_014350	complement(join(<35..1402,1481..1627,1766..>1822))	Acanthamoeba castellanii str. Neff	14914315
ACA1_014360	mRNA	ACA1_014360	NW_004457340.1	2874	5296	D	ACA1_014360	join(<2874..3148,3707..3797,3878..3996,4097..4225,4298..4365,4462..4527,4619..4694,4775..4893,4970..5153,5221..>5296)	Acanthamoeba castellanii str. Neff	14914316
ACA1_014370	mRNA	ACA1_014370	NW_004457340.1	6484	8773	D	ACA1_014370	join(<6484..6919,7029..>8773)	Acanthamoeba castellanii str. Neff	14914318
ACA1_014380	mRNA	ACA1_014380	NW_004457340.1	8894	9715	R	ACA1_014380	complement(join(<8894..8933,9062..9138,9206..9372,9432..9480,9542..>9715))	Acanthamoeba castellanii str. Neff	14914319
ACA1_014390	mRNA	ACA1_014390	NW_004457340.1	9941	10472	D	ACA1_014390	join(<9941..9947,10019..10177,10267..>10472)	Acanthamoeba castellanii str. Neff	14914317
ACA1_313490	mRNA	ACA1_313490	NW_004457339.1	65	2359	R	ACA1_313490	complement(join(<65..501,599..751,843..1383,1478..1590,1692..1833,1901..2084,2178..>2359))	Acanthamoeba castellanii str. Neff	14914313
ACA1_313600	mRNA	ACA1_313600	NW_004457339.1	8558	9478	R	ACA1_313600	complement(join(<8558..8657,8768..8860,8987..9112,9213..9274,9332..>9478))	Acanthamoeba castellanii str. Neff	14914312
ACA1_313610	mRNA	ACA1_313610	NW_004457339.1	9686	13315	D	ACA1_313610	join(<9686..10724,10832..11033,11120..11317,11405..11595,11688..11940,12027..12189,12293..12470,12556..12704,12814..12969,13097..>13315)	Acanthamoeba castellanii str. Neff	14914314
ACA1_313620	mRNA	ACA1_313620	NW_004457339.1	13302	15318	R	ACA1_313620	complement(join(<13302..13523,13610..13742,13859..14037,14117..14243,14348..14470,14563..14680,14796..14898,14963..15065,15182..>15318))	Acanthamoeba castellanii str. Neff	14914311
ACA1_297190	mRNA	ACA1_297190	NW_004457338.1	78	2126	D	ACA1_297190	join(<78..164,247..335,431..>2126)	Acanthamoeba castellanii str. Neff	14914310
ACA1_297200	mRNA	ACA1_297200	NW_004457338.1	2199	4442	R	ACA1_297200	complement(join(<2199..2459,2538..2903,2993..3292,3428..3586,3697..3772,3870..3917,3995..4082,4197..4305,4407..>4442))	Acanthamoeba castellanii str. Neff	14914307
ACA1_297210	mRNA	ACA1_297210	NW_004457338.1	4577	7571	R	ACA1_297210	complement(join(<4577..4723,4818..5002,5025..5667,5739..6280,6360..6541,6640..6782,6839..6917,7162..>7571))	Acanthamoeba castellanii str. Neff	14914308
ACA1_297220	mRNA	ACA1_297220	NW_004457338.1	7991	12346	R	ACA1_297220	complement(join(<7991..8410,8496..8633,8693..8772,8900..10089,10147..10225,10307..10455,10529..10654,10737..10939,11026..11138,11218..11325,11423..11489,11559..11661,11750..11946,12021..12128,12218..>12346))	Acanthamoeba castellanii str. Neff	14914309
ACA1_017880	mRNA	ACA1_017880	NW_004457337.1	333	1284	D	ACA1_017880	join(<333..597,688..891,956..>1284)	Acanthamoeba castellanii str. Neff	14914303
ACA1_017890	mRNA	ACA1_017890	NW_004457337.1	1449	2887	D	ACA1_017890	join(<1449..1873,1994..2312,2426..2590,2672..>2887)	Acanthamoeba castellanii str. Neff	14914306
ACA1_018000	mRNA	ACA1_018000	NW_004457337.1	6082	7860	D	ACA1_018000	join(<6082..6104,6168..6256,6325..6461,6529..6632,6705..6756,6923..7000,7069..7147,7222..7398,7465..7632,7718..>7860)	Acanthamoeba castellanii str. Neff	14914304
ACA1_018110	mRNA	ACA1_018110	NW_004457337.1	9481	9993	R	ACA1_018110	complement(join(<9481..9544,9605..9899,9972..>9993))	Acanthamoeba castellanii str. Neff	14914305
ACA1_018120	mRNA	ACA1_018120	NW_004457337.1	10381	11864	D	ACA1_018120	join(<10381..10839,10911..11067,11164..11460,11566..>11864)	Acanthamoeba castellanii str. Neff	14914300
ACA1_018130	mRNA	ACA1_018130	NW_004457337.1	13435	13641	D	ACA1_018130	<13435..>13641	Acanthamoeba castellanii str. Neff	14914301
ACA1_018140	mRNA	ACA1_018140	NW_004457337.1	14159	18084	R	ACA1_018140	complement(join(<14159..15422,15546..15907,15988..16159,16266..16722,16812..17379,17472..17551,17646..17732,17747..17799,17813..>18084))	Acanthamoeba castellanii str. Neff	14914302
ACA1_002090	mRNA	ACA1_002090	NW_004457336.1	105	499	D	ACA1_002090	join(<105..333,426..>499)	Acanthamoeba castellanii str. Neff	14914298
ACA1_002200	mRNA	ACA1_002200	NW_004457336.1	13044	14169	D	ACA1_002200	join(<13044..13125,13220..13318,13394..13512,13588..13667,13740..13840,13912..13975,14142..>14169)	Acanthamoeba castellanii str. Neff	14914299
ACA1_075500	mRNA	ACA1_075500	NW_004457335.1	242	771	D	ACA1_075500	join(<242..278,363..591,684..>771)	Acanthamoeba castellanii str. Neff	14914297
ACA1_075510	mRNA	ACA1_075510	NW_004457335.1	906	1334	R	ACA1_075510	complement(join(<906..1090,1163..>1334))	Acanthamoeba castellanii str. Neff	14914292
ACA1_075620	mRNA	ACA1_075620	NW_004457335.1	3378	4450	D	ACA1_075620	join(<3378..3600,3714..3941,4022..4173,4271..>4450)	Acanthamoeba castellanii str. Neff	14914293
ACA1_075730	mRNA	ACA1_075730	NW_004457335.1	6795	7491	D	ACA1_075730	join(<6795..6898,6972..7246,7313..>7491)	Acanthamoeba castellanii str. Neff	14914294
ACA1_075740	mRNA	ACA1_075740	NW_004457335.1	7555	12351	D	ACA1_075740	join(<7555..7661,7881..7994,8018..8195,8213..8389,8501..8570,8759..8855,8920..9037,9341..9403,9523..9708,9786..9867,9974..10065,10131..10331,10441..10690,10764..10857,11026..11110,11204..11315,11433..11542,11638..11738,11876..11982,12085..12178,12276..>12351)	Acanthamoeba castellanii str. Neff	14914295
ACA1_075850	mRNA	ACA1_075850	NW_004457335.1	14667	15347	R	ACA1_075850	complement(join(<14667..14731,14888..15182,15204..>15347))	Acanthamoeba castellanii str. Neff	14914296
ACA1_008840	mRNA	ACA1_008840	NW_004457334.1	266	1610	D	ACA1_008840	join(<266..434,509..562,624..721,797..1150,1235..1309,1508..1565,1591..>1610)	Acanthamoeba castellanii str. Neff	14914289
ACA1_008950	mRNA	ACA1_008950	NW_004457334.1	8427	9783	D	ACA1_008950	join(<8427..8492,8751..8866,8928..9125,9234..9300,9378..9462,9548..9641,9708..>9783)	Acanthamoeba castellanii str. Neff	14914291
ACA1_009060	mRNA	ACA1_009060	NW_004457334.1	15191	16116	D	ACA1_009060	join(<15191..15287,15427..15562,15701..15951,16041..>16116)	Acanthamoeba castellanii str. Neff	14914290
ACA1_305150	mRNA	ACA1_305150	NW_004457333.1	54	2285	D	ACA1_305150	join(<54..228,338..466,579..666,777..900,993..1162,1207..1301,1402..1523,1612..1726,1791..1957,2040..>2285)	Acanthamoeba castellanii str. Neff	14914276
ACA1_305160	mRNA	ACA1_305160	NW_004457333.1	2515	4531	R	ACA1_305160	complement(join(<2515..2727,2886..3499,3577..3723,3791..3919,3995..4400,4490..>4531))	Acanthamoeba castellanii str. Neff	14914275
ACA1_305380	mRNA	ACA1_305380	NW_004457333.1	5455	7601	R	ACA1_305380	complement(join(<5455..5579,5660..5760,5859..6359,6496..6656,6730..6838,6968..7101,7244..7262,7353..7426,7503..>7601))	Acanthamoeba castellanii str. Neff	14914278
ACA1_305390	mRNA	ACA1_305390	NW_004457333.1	7713	9484	R	ACA1_305390	complement(join(<7713..7784,7865..7970,8056..8173,8259..8414,8561..8759,8833..8951,9124..9211,9326..>9484))	Acanthamoeba castellanii str. Neff	14914279
ACA1_305400	mRNA	ACA1_305400	NW_004457333.1	9591	12035	R	ACA1_305400	complement(join(<9591..10082,11122..11358,11451..>12035))	Acanthamoeba castellanii str. Neff	14914280
ACA1_305510	mRNA	ACA1_305510	NW_004457333.1	12373	13497	R	ACA1_305510	complement(join(<12373..12501,12562..12689,12767..12943,13022..13151,13279..>13497))	Acanthamoeba castellanii str. Neff	14914281
ACA1_305520	mRNA	ACA1_305520	NW_004457333.1	13994	14834	R	ACA1_305520	complement(join(<13994..14061,14135..14239,14735..>14834))	Acanthamoeba castellanii str. Neff	14914282
ACA1_305530	mRNA	ACA1_305530	NW_004457333.1	15037	16737	D	ACA1_305530	join(<15037..15127,15206..15258,15332..15511,15594..15698,15813..15905,15966..16032,16102..16178,16274..16338,16419..16524,16621..>16737)	Acanthamoeba castellanii str. Neff	14914283
ACA1_305540	mRNA	ACA1_305540	NW_004457333.1	16828	18496	R	ACA1_305540	complement(join(<16828..17136,17221..17321,17433..17550,17672..17815,17930..18019,18118..18249,18356..>18496))	Acanthamoeba castellanii str. Neff	14914284
ACA1_305550	mRNA	ACA1_305550	NW_004457333.1	18700	20571	D	ACA1_305550	join(<18700..18893,19007..19042,19145..19194,19332..19495,19506..19660,19740..19843,19938..20088,20234..20314,20442..>20571)	Acanthamoeba castellanii str. Neff	14914285
ACA1_305560	mRNA	ACA1_305560	NW_004457333.1	20675	21407	R	ACA1_305560	complement(join(<20675..20765,20852..21106,21189..21275,21343..>21407))	Acanthamoeba castellanii str. Neff	14914286
ACA1_305680	mRNA	ACA1_305680	NW_004457333.1	29272	29927	D	ACA1_305680	join(<29272..29380,29472..29541,29615..>29927)	Acanthamoeba castellanii str. Neff	14914288
ACA1_120560	mRNA	ACA1_120560	NW_004457332.1	4950	5803	R	ACA1_120560	complement(join(<4950..5090,5238..5313,5420..5501,5612..5743,5797..>5803))	Acanthamoeba castellanii str. Neff	14914268
ACA1_120570	mRNA	ACA1_120570	NW_004457332.1	6080	8885	R	ACA1_120570	complement(join(<6080..6177,6266..6396,6485..6562,6687..6773,6869..6930,7534..7647,8515..8599,8698..>8885))	Acanthamoeba castellanii str. Neff	14914274
ACA1_120780	mRNA	ACA1_120780	NW_004457332.1	11506	12787	D	ACA1_120780	join(<11506..11544,11605..11740,11860..12093,12210..>12787)	Acanthamoeba castellanii str. Neff	14914269
ACA1_120790	mRNA	ACA1_120790	NW_004457332.1	13004	14475	D	ACA1_120790	join(<13004..13121,13195..13243,13355..13475,13696..13755,13812..13896,13967..14092,14207..>14475)	Acanthamoeba castellanii str. Neff	14914270
ACA1_120800	mRNA	ACA1_120800	NW_004457332.1	14809	17513	R	ACA1_120800	complement(join(<14809..14889,14930..15277,15407..15631,15723..16273,16397..16560,16800..17075,17148..17247,17354..>17513))	Acanthamoeba castellanii str. Neff	14914271
ACA1_120810	mRNA	ACA1_120810	NW_004457332.1	17642	23620	R	ACA1_120810	complement(join(<17642..17737,17899..18028,18157..18598,18761..19052,19173..19247,19361..19441,19728..19874,20031..20198,20305..20410,20553..20579,21617..21690,21809..21982,22113..22181,22291..22374,22890..23258,23356..23490,23522..>23620))	Acanthamoeba castellanii str. Neff	14914272
ACA1_120920	mRNA	ACA1_120920	NW_004457332.1	24153	24960	D	ACA1_120920	<24153..>24960	Acanthamoeba castellanii str. Neff	14914273
ACA1_341550	mRNA	ACA1_341550	NW_004457331.1	117	2884	R	ACA1_341550	complement(join(<117..164,252..309,388..495,565..677,751..880,969..1171,1257..1391,1483..1590,1674..1758,1834..1909,2016..2108,2225..2324,2419..2519,2635..>2884))	Acanthamoeba castellanii str. Neff	14914260
ACA1_341560	mRNA	ACA1_341560	NW_004457331.1	3363	4874	D	ACA1_341560	join(<3363..3864,3936..4069,4139..4399,4517..4594,4692..>4874)	Acanthamoeba castellanii str. Neff	14914267
ACA1_341570	mRNA	ACA1_341570	NW_004457331.1	4969	5635	D	ACA1_341570	join(<4969..5076,5211..5397,5493..>5635)	Acanthamoeba castellanii str. Neff	14914261
ACA1_341680	mRNA	ACA1_341680	NW_004457331.1	8049	9012	R	ACA1_341680	complement(join(<8049..8220,8307..8422,8557..>9012))	Acanthamoeba castellanii str. Neff	14914262
ACA1_341790	mRNA	ACA1_341790	NW_004457331.1	9850	10871	R	ACA1_341790	complement(join(<9850..9884,9973..10095,10184..10367,10423..10699,10783..>10871))	Acanthamoeba castellanii str. Neff	14914263
ACA1_341900	mRNA	ACA1_341900	NW_004457331.1	13377	13761	D	ACA1_341900	join(<13377..13518,13619..>13761)	Acanthamoeba castellanii str. Neff	14914264
ACA1_341910	mRNA	ACA1_341910	NW_004457331.1	14734	17569	D	ACA1_341910	join(<14734..14841,14893..15030,15099..15211,15523..15844,15917..16033,16101..16226,16286..16427,16499..16635,16955..17286,17370..17454,17513..>17569)	Acanthamoeba castellanii str. Neff	14914265
ACA1_341920	mRNA	ACA1_341920	NW_004457331.1	17704	18147	D	ACA1_341920	<17704..>18147	Acanthamoeba castellanii str. Neff	14914266
ACA1_332070	mRNA	ACA1_332070	NW_004457330.1	709	2709	D	ACA1_332070	join(<709..927,1057..1244,1333..1431,1505..1652,2236..>2709)	Acanthamoeba castellanii str. Neff	14914259
ACA1_332180	mRNA	ACA1_332180	NW_004457330.1	2982	3284	D	ACA1_332180	<2982..>3284	Acanthamoeba castellanii str. Neff	14914233
ACA1_332190	mRNA	ACA1_332190	NW_004457330.1	3839	7671	D	ACA1_332190	join(<3839..3919,3988..4065,4142..4265,5141..5242,5565..5638,5905..6087,6342..6455,6549..6690,6777..6922,7006..>7671)	Acanthamoeba castellanii str. Neff	14914234
ACA1_332300	mRNA	ACA1_332300	NW_004457330.1	8310	10309	D	ACA1_332300	join(<8310..8773,8898..9031,9111..9249,9387..9510,9621..9797,9896..>10309)	Acanthamoeba castellanii str. Neff	14914235
ACA1_332310	mRNA	ACA1_332310	NW_004457330.1	10604	14284	D	ACA1_332310	join(<10604..10811,10948..11039,11243..11336,11440..11580,11674..11844,11924..12096,12239..12394,12502..12627,12750..12826,12872..12936,13033..13118,13204..13324,13434..13613,13740..13845,13939..14044,14129..>14284)	Acanthamoeba castellanii str. Neff	14914251
ACA1_332320	mRNA	ACA1_332320	NW_004457330.1	14443	15642	R	ACA1_332320	complement(join(<14443..14697,14871..15066,15249..15340,15451..>15642))	Acanthamoeba castellanii str. Neff	14914252
ACA1_332330	mRNA	ACA1_332330	NW_004457330.1	16199	16519	D	ACA1_332330	join(<16199..16402,16469..>16519)	Acanthamoeba castellanii str. Neff	14914232
ACA1_332340	mRNA	ACA1_332340	NW_004457330.1	16810	17175	D	ACA1_332340	<16810..>17175	Acanthamoeba castellanii str. Neff	14914246
ACA1_332350	mRNA	ACA1_332350	NW_004457330.1	17216	19126	D	ACA1_332350	join(<17216..17420,17523..17674,17780..17908,18072..18188,18263..18602,18767..18888,18989..>19126)	Acanthamoeba castellanii str. Neff	14914247
ACA1_332360	mRNA	ACA1_332360	NW_004457330.1	19210	20304	R	ACA1_332360	complement(<19210..>20304)	Acanthamoeba castellanii str. Neff	14914248
ACA1_332470	mRNA	ACA1_332470	NW_004457330.1	22755	23783	R	ACA1_332470	complement(join(<22755..22982,23069..23224,23323..23469,23553..23626,23729..>23783))	Acanthamoeba castellanii str. Neff	14914249
ACA1_332490	mRNA	ACA1_332490	NW_004457330.1	26729	27720	D	ACA1_332490	join(<26729..27013,27123..27374,27478..>27720)	Acanthamoeba castellanii str. Neff	14914253
ACA1_332500	mRNA	ACA1_332500	NW_004457330.1	27786	31099	R	ACA1_332500	complement(join(<27786..28050,28238..28320,28409..28474,28548..28613,28707..28826,28932..29009,29164..29270,29393..29483,29828..29938,30012..30095,30176..30243,30334..30408,30516..30639,30753..30893,31073..>31099))	Acanthamoeba castellanii str. Neff	14914254
ACA1_332510	mRNA	ACA1_332510	NW_004457330.1	31257	34535	R	ACA1_332510	complement(join(<31257..32193,32278..32711,32844..32944,33032..33091,33176..33253,33384..33542,33639..33794,33892..34044,34171..34294,34431..>34535))	Acanthamoeba castellanii str. Neff	14914255
ACA1_332520	mRNA	ACA1_332520	NW_004457330.1	34622	35457	D	ACA1_332520	join(<34622..34698,34770..34807,34905..35001,35098..35216,35303..>35457)	Acanthamoeba castellanii str. Neff	14914256
ACA1_332530	mRNA	ACA1_332530	NW_004457330.1	35557	36106	R	ACA1_332530	complement(join(<35557..35920,36033..>36106))	Acanthamoeba castellanii str. Neff	14914257
ACA1_332540	mRNA	ACA1_332540	NW_004457330.1	36929	38014	R	ACA1_332540	complement(join(<36929..36958,37416..37507,37541..37745,37870..37941,37958..>38014))	Acanthamoeba castellanii str. Neff	14914258
ACA1_332550	mRNA	ACA1_332550	NW_004457330.1	39821	40078	D	ACA1_332550	<39821..>40078	Acanthamoeba castellanii str. Neff	14914236
ACA1_332560	mRNA	ACA1_332560	NW_004457330.1	40533	40859	D	ACA1_332560	join(<40533..40650,40690..>40859)	Acanthamoeba castellanii str. Neff	14914237
ACA1_332570	mRNA	ACA1_332570	NW_004457330.1	41164	41562	D	ACA1_332570	join(<41164..41447,41484..>41562)	Acanthamoeba castellanii str. Neff	14914238
ACA1_332580	mRNA	ACA1_332580	NW_004457330.1	41766	41981	R	ACA1_332580	complement(<41766..>41981)	Acanthamoeba castellanii str. Neff	14914239
ACA1_332590	mRNA	ACA1_332590	NW_004457330.1	42128	43708	R	ACA1_332590	complement(join(<42128..42359,42457..42553,42657..42732,42810..42865,42944..43019,43096..43190,43268..43429,43522..>43708))	Acanthamoeba castellanii str. Neff	14914240
ACA1_332600	mRNA	ACA1_332600	NW_004457330.1	43968	45696	R	ACA1_332600	complement(join(<43968..44028,44104..44251,44382..44478,44664..44786,44879..45012,45056..45182,45255..45323,45385..>45696))	Acanthamoeba castellanii str. Neff	14914241
ACA1_332710	mRNA	ACA1_332710	NW_004457330.1	45843	48022	R	ACA1_332710	complement(join(<45843..46023,46095..46191,46607..46773,46857..46894,46937..47050,47146..47316,47420..47729,47772..>48022))	Acanthamoeba castellanii str. Neff	14914242
ACA1_332820	mRNA	ACA1_332820	NW_004457330.1	48299	49642	D	ACA1_332820	join(<48299..48411,48502..>49642)	Acanthamoeba castellanii str. Neff	14914243
ACA1_332830	mRNA	ACA1_332830	NW_004457330.1	49777	54612	R	ACA1_332830	complement(join(<49777..49805,49976..50065,50147..50527,50602..50822,52800..52940,53025..53193,53280..53687,53760..53959,54050..54218,54297..>54612))	Acanthamoeba castellanii str. Neff	14914244
ACA1_332940	mRNA	ACA1_332940	NW_004457330.1	55308	56904	D	ACA1_332940	join(<55308..55505,55613..55735,55853..55990,56094..56208,56297..56481,56539..56614,56696..>56904)	Acanthamoeba castellanii str. Neff	14914245
ACA1_037700	mRNA	ACA1_037700	NW_004457329.1	1407	5047	D	ACA1_037700	join(<1407..1539,1650..1780,1847..1924,1989..2159,2231..2325,2418..2517,2592..2690,2819..2938,3027..3179,3261..3422,3514..3621,3721..3844,3927..4093,4159..4269,4375..4486,4565..4748,4834..>5047)	Acanthamoeba castellanii str. Neff	14914199
ACA1_037720	mRNA	ACA1_037720	NW_004457329.1	7042	8888	D	ACA1_037720	join(<7042..7169,7295..7403,7530..7586,7688..7834,7944..>8888)	Acanthamoeba castellanii str. Neff	14914219
ACA1_037730	mRNA	ACA1_037730	NW_004457329.1	9047	10864	D	ACA1_037730	join(<9047..9257,9332..9408,9493..9598,9670..10181,10254..10361,10447..10585,10662..>10864)	Acanthamoeba castellanii str. Neff	14914220
ACA1_037740	mRNA	ACA1_037740	NW_004457329.1	11026	13886	R	ACA1_037740	complement(join(<11026..11106,11210..11361,11440..11721,11814..11910,12059..12162,12240..12376,12583..12656,12766..12869,12958..13020,13115..13205,13381..13444,13540..13584,13753..>13886))	Acanthamoeba castellanii str. Neff	14914221
ACA1_037750	mRNA	ACA1_037750	NW_004457329.1	14102	14576	R	ACA1_037750	complement(join(<14102..14336,14443..>14576))	Acanthamoeba castellanii str. Neff	14914203
ACA1_037760	mRNA	ACA1_037760	NW_004457329.1	14660	17392	R	ACA1_037760	complement(join(<14660..14914,14999..15097,15189..15292,15382..15520,15606..15837,15893..16031,16089..16230,16341..16437,16522..16654,16791..16941,17040..17146,17227..>17392))	Acanthamoeba castellanii str. Neff	14914204
ACA1_037770	mRNA	ACA1_037770	NW_004457329.1	17850	19423	D	ACA1_037770	join(<17850..17957,18035..18104,18179..18286,18358..18494,18548..18671,18756..18835,18919..19278,19337..>19423)	Acanthamoeba castellanii str. Neff	14914205
ACA1_037780	mRNA	ACA1_037780	NW_004457329.1	19943	25790	D	ACA1_037780	join(<19943..20298,20423..20588,20675..21125,21216..21302,21399..21487,21561..21644,21726..21824,21921..22226,22305..22436,22546..22777,22860..23009,23089..23191,23276..23863,23951..24668,24780..25411,25484..>25790)	Acanthamoeba castellanii str. Neff	14914170
ACA1_037790	mRNA	ACA1_037790	NW_004457329.1	26249	26752	D	ACA1_037790	<26249..>26752	Acanthamoeba castellanii str. Neff	14914171
ACA1_037800	mRNA	ACA1_037800	NW_004457329.1	27101	28051	R	ACA1_037800	complement(join(<27101..27375,27454..27631,27688..27810,27869..>28051))	Acanthamoeba castellanii str. Neff	14914200
ACA1_037810	mRNA	ACA1_037810	NW_004457329.1	28149	28775	R	ACA1_037810	complement(join(<28149..28553,28620..>28775))	Acanthamoeba castellanii str. Neff	14914201
ACA1_037820	mRNA	ACA1_037820	NW_004457329.1	28969	30492	R	ACA1_037820	complement(join(<28969..29237,29334..29488,29555..29804,29888..30011,30092..30238,30340..>30492))	Acanthamoeba castellanii str. Neff	14914202
ACA1_037830	mRNA	ACA1_037830	NW_004457329.1	31396	33561	D	ACA1_037830	join(<31396..31468,31553..31610,31725..31844,31941..32100,32193..32277,32360..32416,32517..32810,32892..33161,33233..>33561)	Acanthamoeba castellanii str. Neff	14914192
ACA1_037840	mRNA	ACA1_037840	NW_004457329.1	33740	34997	R	ACA1_037840	complement(join(<33740..34001,34091..34232,34306..34495,34564..34677,34742..34843,34917..>34997))	Acanthamoeba castellanii str. Neff	14914193
ACA1_037850	mRNA	ACA1_037850	NW_004457329.1	35141	41954	R	ACA1_037850	complement(join(<35141..35248,35321..35814,35908..36487,36536..36653,36739..37031,37110..37467,37553..37872,37939..37983,38055..38171,38269..38445,38544..38675,38752..39104,39177..39632,39699..39765,39865..39962,40074..40241,40313..40388,40464..40778,40865..40982,41130..41311,41479..41753,41861..>41954))	Acanthamoeba castellanii str. Neff	14914206
ACA1_037860	mRNA	ACA1_037860	NW_004457329.1	42470	45599	R	ACA1_037860	complement(join(<42470..42699,42766..42855,42975..43088,43194..43344,43412..43536,43621..43741,43836..43966,44034..44127,44198..44301,44362..44424,44497..44601,44701..44785,44856..44904,44985..45118,45198..>45599))	Acanthamoeba castellanii str. Neff	14914207
ACA1_037870	mRNA	ACA1_037870	NW_004457329.1	45866	50760	D	ACA1_037870	join(<45866..45907,46220..46381,46470..46704,46798..46898,46990..47070,47136..47254,47345..47477,47549..47703,47785..47908,47999..48100,48161..48250,48310..48408,48495..48606,48699..48733,48837..48974,49057..49131,49223..49311,49397..49471,49542..49716,49789..49937,50047..50164,50259..50354,50439..50531,50635..>50760)	Acanthamoeba castellanii str. Neff	14914208
ACA1_037880	mRNA	ACA1_037880	NW_004457329.1	50628	51781	R	ACA1_037880	complement(join(<50628..51413,51479..>51781))	Acanthamoeba castellanii str. Neff	14914163
ACA1_037900	mRNA	ACA1_037900	NW_004457329.1	53006	54838	R	ACA1_037900	complement(join(<53006..53314,53420..53753,53842..53936,54022..54138,54211..54302,54378..54489,54554..54638,54720..>54838))	Acanthamoeba castellanii str. Neff	14914165
ACA1_037910	mRNA	ACA1_037910	NW_004457329.1	55389	55649	R	ACA1_037910	complement(<55389..>55649)	Acanthamoeba castellanii str. Neff	14914166
ACA1_037920	mRNA	ACA1_037920	NW_004457329.1	56154	58169	D	ACA1_037920	join(<56154..56340,56431..56519,56590..56696,56761..56879,56963..57024,57093..57188,57266..57412,57506..57646,57725..57830,57910..>58169)	Acanthamoeba castellanii str. Neff	14914167
ACA1_037930	mRNA	ACA1_037930	NW_004457329.1	58407	59311	D	ACA1_037930	join(<58407..58532,58670..58824,58928..59089,59194..>59311)	Acanthamoeba castellanii str. Neff	14914168
ACA1_037940	mRNA	ACA1_037940	NW_004457329.1	59992	61530	R	ACA1_037940	complement(join(<59992..60108,60211..60344,60412..60493,60576..60706,60786..60974,61084..61143,61270..61372,61483..>61530))	Acanthamoeba castellanii str. Neff	14914209
ACA1_038050	mRNA	ACA1_038050	NW_004457329.1	61808	62386	D	ACA1_038050	join(<61808..61984,62068..62191,62289..>62386)	Acanthamoeba castellanii str. Neff	14914210
ACA1_038070	mRNA	ACA1_038070	NW_004457329.1	65623	66111	R	ACA1_038070	complement(<65623..>66111)	Acanthamoeba castellanii str. Neff	14914212
ACA1_038080	mRNA	ACA1_038080	NW_004457329.1	66502	68371	D	ACA1_038080	join(<66502..66670,66749..66783,66872..66969,67059..67116,67201..67309,67393..67482,67570..67655,67739..67883,67945..68018,68105..>68371)	Acanthamoeba castellanii str. Neff	14914213
ACA1_038090	mRNA	ACA1_038090	NW_004457329.1	68473	70312	R	ACA1_038090	complement(join(<68473..68565,68639..68980,69148..69288,69382..69636,69737..69886,70037..>70312))	Acanthamoeba castellanii str. Neff	14914214
ACA1_038110	mRNA	ACA1_038110	NW_004457329.1	73509	75229	R	ACA1_038110	complement(join(<73509..74279,74354..74645,74705..74782,74860..75016,75091..>75229))	Acanthamoeba castellanii str. Neff	14914216
ACA1_038120	mRNA	ACA1_038120	NW_004457329.1	76033	77340	R	ACA1_038120	complement(join(<76033..76117,76189..76931,77068..>77340))	Acanthamoeba castellanii str. Neff	14914217
ACA1_038130	mRNA	ACA1_038130	NW_004457329.1	78321	78803	R	ACA1_038130	complement(join(<78321..78627,78784..>78803))	Acanthamoeba castellanii str. Neff	14914218
ACA1_038140	mRNA	ACA1_038140	NW_004457329.1	79044	80908	D	ACA1_038140	join(<79044..79411,79485..79617,79708..79809,79940..80038,80120..80192,80262..80390,80484..80606,80685..>80908)	Acanthamoeba castellanii str. Neff	14914153
ACA1_038150	mRNA	ACA1_038150	NW_004457329.1	81013	83847	R	ACA1_038150	complement(join(<81013..81186,81274..81477,81565..81672,81763..81904,81980..82097,82222..82338,82401..82484,82571..82624,82711..82797,82917..82968,83075..83170,83263..83579,83721..>83847))	Acanthamoeba castellanii str. Neff	14914154
ACA1_038160	mRNA	ACA1_038160	NW_004457329.1	84052	86731	R	ACA1_038160	complement(join(<84052..84420,84474..84607,84677..84831,84851..84972,85000..85099,85186..85509,85606..85780,85893..86060,86131..86224,86306..86387,86637..>86731))	Acanthamoeba castellanii str. Neff	14914155
ACA1_038170	mRNA	ACA1_038170	NW_004457329.1	87156	87827	D	ACA1_038170	join(<87156..87218,87594..87669,87751..>87827)	Acanthamoeba castellanii str. Neff	14914156
ACA1_038180	mRNA	ACA1_038180	NW_004457329.1	88077	91599	D	ACA1_038180	join(<88077..89150,89182..90337,90407..90497,90572..90704,90795..90905,91004..91146,91233..>91599)	Acanthamoeba castellanii str. Neff	14914157
ACA1_038190	mRNA	ACA1_038190	NW_004457329.1	92055	93262	D	ACA1_038190	join(<92055..92152,92288..92315,92383..92440,92713..92888,92972..93095,93165..>93262)	Acanthamoeba castellanii str. Neff	14914158
ACA1_038200	mRNA	ACA1_038200	NW_004457329.1	93912	96308	D	ACA1_038200	join(<93912..94086,94198..94856,94900..95035,95105..95164,95253..95316,95418..95563,95683..95871,96013..>96308)	Acanthamoeba castellanii str. Neff	14914159
ACA1_038210	mRNA	ACA1_038210	NW_004457329.1	96428	98036	R	ACA1_038210	complement(join(<96428..96790,96940..97097,97191..97245,97330..97386,97477..97563,97686..>98036))	Acanthamoeba castellanii str. Neff	14914160
ACA1_038220	mRNA	ACA1_038220	NW_004457329.1	98088	101916	R	ACA1_038220	complement(join(<98088..98236,98336..98412,98499..98565,98696..98757,98834..99353,99447..99792,99893..99963,100050..100548,100788..100931,100975..101271,101337..101543,101647..>101916))	Acanthamoeba castellanii str. Neff	14914161
ACA1_038230	mRNA	ACA1_038230	NW_004457329.1	102089	103095	R	ACA1_038230	complement(join(<102089..102198,102282..102373,102457..102614,102701..102829,102937..>103095))	Acanthamoeba castellanii str. Neff	14914162
ACA1_038240	mRNA	ACA1_038240	NW_004457329.1	103416	108362	D	ACA1_038240	join(<103416..103485,103596..103747,103916..104026,104119..104209,104299..104439,104518..104626,104722..104807,104907..105000,105110..105259,105365..105441,105531..105643,105815..105899,105983..106041,106127..106302,106384..106517,106601..106677,106746..106818,106889..107156,107270..107585,107686..108064,108187..>108362)	Acanthamoeba castellanii str. Neff	14914172
ACA1_038250	mRNA	ACA1_038250	NW_004457329.1	108565	109279	R	ACA1_038250	complement(join(<108565..108616,108684..108789,108872..109010,109112..>109279))	Acanthamoeba castellanii str. Neff	14914173
ACA1_038260	mRNA	ACA1_038260	NW_004457329.1	109355	112760	R	ACA1_038260	complement(join(<109355..109717,109802..110002,110095..111114,111183..111262,111279..111359,111444..111595,111700..111863,111955..112101,112230..112633,112712..>112760))	Acanthamoeba castellanii str. Neff	14914174
ACA1_038270	mRNA	ACA1_038270	NW_004457329.1	113363	113800	D	ACA1_038270	join(<113363..113531,113610..>113800)	Acanthamoeba castellanii str. Neff	14914175
ACA1_038280	mRNA	ACA1_038280	NW_004457329.1	114012	118983	D	ACA1_038280	join(<114012..114225,114339..114521,114579..114817,114895..115137,115203..115381,115447..115600,115674..115926,116010..116312,116404..116665,116734..116946,117039..117255,117344..117491,117570..117764,117861..118081,118161..118364,118451..118659,118737..>118983)	Acanthamoeba castellanii str. Neff	14914176
ACA1_038290	mRNA	ACA1_038290	NW_004457329.1	119184	119934	R	ACA1_038290	complement(join(<119184..119331,119648..>119934))	Acanthamoeba castellanii str. Neff	14914177
ACA1_038300	mRNA	ACA1_038300	NW_004457329.1	120026	120591	D	ACA1_038300	join(<120026..120086,120176..120381,120469..>120591)	Acanthamoeba castellanii str. Neff	14914178
ACA1_038310	mRNA	ACA1_038310	NW_004457329.1	120687	121628	R	ACA1_038310	complement(<120687..>121628)	Acanthamoeba castellanii str. Neff	14914179
ACA1_038320	mRNA	ACA1_038320	NW_004457329.1	121707	122510	D	ACA1_038320	join(<121707..122280,122350..>122510)	Acanthamoeba castellanii str. Neff	14914180
ACA1_038330	mRNA	ACA1_038330	NW_004457329.1	122589	124502	R	ACA1_038330	complement(join(<122589..122834,122907..122982,123094..123214,123289..123410,123601..123727,123767..123861,123942..124019,124138..>124502))	Acanthamoeba castellanii str. Neff	14914181
ACA1_038340	mRNA	ACA1_038340	NW_004457329.1	124762	129267	R	ACA1_038340	complement(join(<124762..124851,124927..125139,125213..125429,125517..125612,125703..125815,125888..126030,126104..126308,126390..126548,126623..126710,126781..126874,126948..127032,127096..127256,127336..127549,127640..127794,127886..127957,128037..>129267))	Acanthamoeba castellanii str. Neff	14914182
ACA1_038350	mRNA	ACA1_038350	NW_004457329.1	129868	134286	R	ACA1_038350	complement(join(<129868..130541,130575..131015,131096..131260,131326..131398,131473..131523,131602..131680,131745..131810,131903..132125,132206..132294,132364..132435,132507..132573,132645..132756,132839..132942,133009..133112,133190..133371,133508..133573,133664..133686,133749..133913,133993..134164,134227..>134286))	Acanthamoeba castellanii str. Neff	14914183
ACA1_038360	mRNA	ACA1_038360	NW_004457329.1	134453	135600	D	ACA1_038360	join(<134453..134795,134895..134999,135113..>135600)	Acanthamoeba castellanii str. Neff	14914184
ACA1_038370	mRNA	ACA1_038370	NW_004457329.1	136271	137597	D	ACA1_038370	join(<136271..136327,136425..136517,136623..>137597)	Acanthamoeba castellanii str. Neff	14914185
ACA1_038380	mRNA	ACA1_038380	NW_004457329.1	137734	138003	R	ACA1_038380	complement(<137734..>138003)	Acanthamoeba castellanii str. Neff	14914186
ACA1_038390	mRNA	ACA1_038390	NW_004457329.1	138104	139328	D	ACA1_038390	join(<138104..138185,138255..138411,138524..138656,138760..138843,138924..139055,139146..>139328)	Acanthamoeba castellanii str. Neff	14914187
ACA1_038400	mRNA	ACA1_038400	NW_004457329.1	139574	142472	D	ACA1_038400	join(<139574..140634,140681..140794,140940..141011,141117..141259,141346..141573,141668..141780,141859..141949,142027..142211,142314..>142472)	Acanthamoeba castellanii str. Neff	14914188
ACA1_038410	mRNA	ACA1_038410	NW_004457329.1	142811	143830	D	ACA1_038410	join(<142811..143014,143217..143246,143305..143421,143494..143591,143656..>143830)	Acanthamoeba castellanii str. Neff	14914189
ACA1_038420	mRNA	ACA1_038420	NW_004457329.1	144054	146282	R	ACA1_038420	complement(join(<144054..144163,144234..144338,144403..144545,144642..144740,144819..144930,145011..145151,145231..145390,145470..145658,145773..>146282))	Acanthamoeba castellanii str. Neff	14914190
ACA1_038430	mRNA	ACA1_038430	NW_004457329.1	146614	148937	D	ACA1_038430	join(<146614..146759,146854..146959,147035..147108,147179..147368,147431..147633,147696..147820,147910..148030,148103..148256,148329..148454,148538..148705,148776..>148937)	Acanthamoeba castellanii str. Neff	14914191
ACA1_038440	mRNA	ACA1_038440	NW_004457329.1	149126	149572	R	ACA1_038440	complement(join(<149126..149214,149293..>149572))	Acanthamoeba castellanii str. Neff	14914222
ACA1_038450	mRNA	ACA1_038450	NW_004457329.1	150530	152418	R	ACA1_038450	complement(join(<150530..151107,151177..151504,151593..151811,151900..151992,152159..152223,152373..>152418))	Acanthamoeba castellanii str. Neff	14914223
ACA1_038460	mRNA	ACA1_038460	NW_004457329.1	152860	154070	D	ACA1_038460	join(<152860..153227,153311..>154070)	Acanthamoeba castellanii str. Neff	14914224
ACA1_038470	mRNA	ACA1_038470	NW_004457329.1	154705	156567	R	ACA1_038470	complement(join(<154705..154781,154854..154959,155047..155193,155259..155363,155441..155616,155690..155758,155799..156017,156082..156213,156261..156336,156412..>156567))	Acanthamoeba castellanii str. Neff	14914225
ACA1_038480	mRNA	ACA1_038480	NW_004457329.1	156676	162530	D	ACA1_038480	join(<156676..157212,157286..157539,157696..157837,157954..158306,158407..159240,159324..159475,159569..159722,159814..160022,160137..160269,160387..160495,160565..160749,160832..160986,161053..162212,162273..>162530)	Acanthamoeba castellanii str. Neff	14914226
ACA1_038490	mRNA	ACA1_038490	NW_004457329.1	162635	164990	R	ACA1_038490	complement(join(<162635..162766,162861..163020,163111..163571,163700..164215,164357..164431,164577..164814,164911..>164990))	Acanthamoeba castellanii str. Neff	14914227
ACA1_038500	mRNA	ACA1_038500	NW_004457329.1	165341	165794	R	ACA1_038500	complement(join(<165341..165466,165536..165633,165704..>165794))	Acanthamoeba castellanii str. Neff	14914228
ACA1_038510	mRNA	ACA1_038510	NW_004457329.1	166108	168095	R	ACA1_038510	complement(join(<166108..167284,167377..167444,167472..167593,167678..167865,167956..>168095))	Acanthamoeba castellanii str. Neff	14914229
ACA1_038520	mRNA	ACA1_038520	NW_004457329.1	168529	170435	D	ACA1_038520	join(<168529..168685,168768..169131,169222..169291,169405..169557,169715..169862,169947..170244,170339..>170435)	Acanthamoeba castellanii str. Neff	14914230
ACA1_038530	mRNA	ACA1_038530	NW_004457329.1	170496	173963	R	ACA1_038530	complement(join(<170496..170684,170771..170942,171018..171140,171228..171351,171442..171528,171554..171624,171737..171860,171958..172162,172206..172332,172418..172518,172591..172683,172758..172922,173013..173123,173282..173486,173574..173740,173814..>173963))	Acanthamoeba castellanii str. Neff	14914231
ACA1_038540	mRNA	ACA1_038540	NW_004457329.1	174651	176580	D	ACA1_038540	join(<174651..174837,174898..174996,175106..175287,175360..175477,175559..175677,175755..175869,175947..176117,176198..176284,176348..>176580)	Acanthamoeba castellanii str. Neff	14914194
ACA1_038550	mRNA	ACA1_038550	NW_004457329.1	177108	181660	D	ACA1_038550	join(<177108..177503,177721..178737,178821..179433,179511..179689,179799..180779,180861..180999,181077..>181660)	Acanthamoeba castellanii str. Neff	14914195
ACA1_038560	mRNA	ACA1_038560	NW_004457329.1	181689	183146	R	ACA1_038560	complement(join(<181689..181703,181823..182034,182091..182261,182478..182639,182743..182958,183029..>183146))	Acanthamoeba castellanii str. Neff	14914196
ACA1_038570	mRNA	ACA1_038570	NW_004457329.1	183527	185668	R	ACA1_038570	complement(join(<183527..183911,183977..184093,184200..184637,184697..184772,184872..184935,185025..185122,185209..185291,185381..185473,185604..>185668))	Acanthamoeba castellanii str. Neff	14914197
ACA1_038580	mRNA	ACA1_038580	NW_004457329.1	185925	186122	D	ACA1_038580	<185925..>186122	Acanthamoeba castellanii str. Neff	14914198
ACA1_024150	mRNA	ACA1_024150	NW_004457328.1	443	2104	D	ACA1_024150	join(<443..485,598..719,825..981,1062..1125,1203..1323,1422..1501,1616..1633,1712..1949,2030..>2104)	Acanthamoeba castellanii str. Neff	14914143
ACA1_024160	mRNA	ACA1_024160	NW_004457328.1	2353	7254	R	ACA1_024160	complement(join(<2353..2462,2536..2626,2711..2890,3004..3204,3281..3449,3522..3651,3727..3862,3936..4024,4093..4297,4380..4466,4543..4838,4913..4955,5040..5195,5267..5441,5531..5679,5743..5940,5995..6527,6595..6766,6835..>7254))	Acanthamoeba castellanii str. Neff	14914142
ACA1_024170	mRNA	ACA1_024170	NW_004457328.1	7485	8744	R	ACA1_024170	complement(join(<7485..7533,7765..7954,8021..8117,8174..8356,8410..8488,8569..>8744))	Acanthamoeba castellanii str. Neff	14914141
ACA1_024180	mRNA	ACA1_024180	NW_004457328.1	8981	10499	D	ACA1_024180	join(<8981..9136,9209..9283,9371..9505,9591..9697,9789..9879,9950..10022,10105..10265,10371..>10499)	Acanthamoeba castellanii str. Neff	14914144
ACA1_024190	mRNA	ACA1_024190	NW_004457328.1	10639	13062	R	ACA1_024190	complement(join(<10639..10829,10902..>13062))	Acanthamoeba castellanii str. Neff	14914145
ACA1_024200	mRNA	ACA1_024200	NW_004457328.1	13381	16996	R	ACA1_024200	complement(join(<13381..13538,13627..13737,13850..13941,14015..14171,14279..14349,14439..14633,14720..14804,14885..15012,15095..15319,15409..15525,15619..15696,15766..15882,15939..>16996))	Acanthamoeba castellanii str. Neff	14914146
ACA1_024210	mRNA	ACA1_024210	NW_004457328.1	17438	18796	R	ACA1_024210	complement(join(<17438..17575,17669..17910,17997..18104,18183..18365,18475..>18796))	Acanthamoeba castellanii str. Neff	14914147
ACA1_024220	mRNA	ACA1_024220	NW_004457328.1	19577	21813	D	ACA1_024220	join(<19577..19681,19765..19818,19928..20004,20239..20325,20407..20479,20588..20702,20770..20859,20963..21145,21229..21314,21421..21483,21590..21653,21737..>21813)	Acanthamoeba castellanii str. Neff	14914148
ACA1_024230	mRNA	ACA1_024230	NW_004457328.1	22039	22543	R	ACA1_024230	complement(join(<22039..22124,22192..22275,22348..22428,22534..>22543))	Acanthamoeba castellanii str. Neff	14914149
ACA1_024240	mRNA	ACA1_024240	NW_004457328.1	22820	24574	R	ACA1_024240	complement(join(<22820..22960,23039..23132,23216..23368,23444..23535,23615..23674,23765..23869,23951..24011,24104..24287,24388..>24574))	Acanthamoeba castellanii str. Neff	14914150
ACA1_024250	mRNA	ACA1_024250	NW_004457328.1	24941	27567	R	ACA1_024250	complement(join(<24941..25128,25330..25429,25500..25613,25679..25796,25810..25835,25904..26095,26127..26338,26415..26504,26560..26757,26832..26906,26969..27166,27294..>27567))	Acanthamoeba castellanii str. Neff	14914151
ACA1_024260	mRNA	ACA1_024260	NW_004457328.1	27941	29059	R	ACA1_024260	complement(join(<27941..28081,28204..28304,28439..28554,28626..28690,28771..28898,29010..>29059))	Acanthamoeba castellanii str. Neff	14914152
ACA1_084040	mRNA	ACA1_084040	NW_004457327.1	86	1245	R	ACA1_084040	complement(join(<86..729,850..990,1095..>1245))	Acanthamoeba castellanii str. Neff	14914138
ACA1_084150	mRNA	ACA1_084150	NW_004457327.1	3720	5704	R	ACA1_084150	complement(join(<3720..3949,4040..4215,4416..4437,4540..4695,4811..5006,5174..5327,5472..5493,5587..>5704))	Acanthamoeba castellanii str. Neff	14914140
ACA1_084260	mRNA	ACA1_084260	NW_004457327.1	6022	8804	R	ACA1_084260	complement(join(<6022..6261,6378..6495,6591..6758,6837..6918,7003..7075,7189..7298,7381..7604,7713..7792,7890..7935,8014..8165,8298..8398,8504..8570,8679..>8804))	Acanthamoeba castellanii str. Neff	14914134
ACA1_084370	mRNA	ACA1_084370	NW_004457327.1	12422	14418	D	ACA1_084370	join(<12422..12584,12670..13084,13226..13358,13481..13605,13721..14015,14176..>14418)	Acanthamoeba castellanii str. Neff	14914139
ACA1_084380	mRNA	ACA1_084380	NW_004457327.1	14789	15295	D	ACA1_084380	join(<14789..14852,14922..>15295)	Acanthamoeba castellanii str. Neff	14914135
ACA1_084390	mRNA	ACA1_084390	NW_004457327.1	15584	20430	R	ACA1_084390	complement(join(<15584..15790,15884..15961,16321..16488,16585..16794,16918..17034,17103..17168,17267..17350,17433..17573,17665..17797,17877..17935,18793..18843,18941..19045,19129..19241,19396..19591,19673..19813,19916..20017,20111..20239,20299..>20430))	Acanthamoeba castellanii str. Neff	14914136
ACA1_084500	mRNA	ACA1_084500	NW_004457327.1	20938	21591	D	ACA1_084500	join(<20938..21022,21082..21259,21409..>21591)	Acanthamoeba castellanii str. Neff	14914137
ACA1_358270	mRNA	ACA1_358270	NW_004457326.1	1443	2851	R	ACA1_358270	complement(join(<1443..1636,1750..1842,1915..2024,2114..2246,2351..2410,2535..2611,2697..>2851))	Acanthamoeba castellanii str. Neff	14914124
ACA1_358380	mRNA	ACA1_358380	NW_004457326.1	3977	4411	R	ACA1_358380	complement(<3977..>4411)	Acanthamoeba castellanii str. Neff	14914116
ACA1_358490	mRNA	ACA1_358490	NW_004457326.1	5470	5857	R	ACA1_358490	complement(join(<5470..5568,5630..5716,5786..>5857))	Acanthamoeba castellanii str. Neff	14914123
ACA1_358500	mRNA	ACA1_358500	NW_004457326.1	7629	10292	D	ACA1_358500	join(<7629..7750,10091..10166,10212..>10292)	Acanthamoeba castellanii str. Neff	14914117
ACA1_358610	mRNA	ACA1_358610	NW_004457326.1	11819	13340	R	ACA1_358610	complement(join(<11819..11964,12062..12233,12284..12454,12560..12655,12785..12864,12930..12995,13091..13174,13244..>13340))	Acanthamoeba castellanii str. Neff	14914118
ACA1_358620	mRNA	ACA1_358620	NW_004457326.1	13515	15074	R	ACA1_358620	complement(<13515..>15074)	Acanthamoeba castellanii str. Neff	14914119
ACA1_358630	mRNA	ACA1_358630	NW_004457326.1	15665	17525	R	ACA1_358630	complement(join(<15665..15864,15958..16072,16142..16414,16500..>17525))	Acanthamoeba castellanii str. Neff	14914120
ACA1_358640	mRNA	ACA1_358640	NW_004457326.1	18025	19943	D	ACA1_358640	join(<18025..18102,18360..18522,18588..18787,18858..18981,19057..19158,19261..19334,19399..19477,19560..19701,19901..>19943)	Acanthamoeba castellanii str. Neff	14914121
ACA1_358650	mRNA	ACA1_358650	NW_004457326.1	20163	21692	D	ACA1_358650	join(<20163..20199,20260..20353,20442..20664,20738..20779,20834..20933,21007..21070,21160..21335,21403..21550,21626..>21692)	Acanthamoeba castellanii str. Neff	14914122
ACA1_358660	mRNA	ACA1_358660	NW_004457326.1	21872	25638	D	ACA1_358660	join(<21872..21973,22150..22304,22432..22463,22558..22606,22692..22752,22841..22903,23091..23162,23259..23320,23400..23463,23556..23609,23708..23829,23903..23974,24056..24150,24247..24432,24529..25106,25149..25226,25296..25344,25436..25475,25563..>25638)	Acanthamoeba castellanii str. Neff	14914125
ACA1_358670	mRNA	ACA1_358670	NW_004457326.1	26007	26964	D	ACA1_358670	join(<26007..26321,26439..26522,26613..26694,26789..>26964)	Acanthamoeba castellanii str. Neff	14914126
ACA1_358790	mRNA	ACA1_358790	NW_004457326.1	30804	43012	R	ACA1_358790	complement(join(<30804..31721,31801..32844,32920..33046,33116..33459,33550..33785,33883..33931,33944..34477,34557..35318,35409..35648,35755..35994,36090..36329,36400..36639,36719..36958,37034..37513,37618..37857,37943..38182,38277..38516,38596..38835,38944..39183,39272..39511,39618..39857,39936..40175,40265..40323,40456..40636,40714..40953,41025..41083,41161..41659,41728..41876,41983..42166,42245..42336,42481..42679,42878..>43012))	Acanthamoeba castellanii str. Neff	14914128
ACA1_358800	mRNA	ACA1_358800	NW_004457326.1	43721	47109	R	ACA1_358800	complement(join(<43721..43949,44017..44177,44189..44262,44338..44493,44569..44697,44791..44943,45045..45514,45608..45698,45784..45900,45972..46220,46298..46424,46675..>47109))	Acanthamoeba castellanii str. Neff	14914129
ACA1_358910	mRNA	ACA1_358910	NW_004457326.1	47206	47449	R	ACA1_358910	complement(join(<47206..47295,47381..>47449))	Acanthamoeba castellanii str. Neff	14914112
ACA1_359020	mRNA	ACA1_359020	NW_004457326.1	51819	53509	D	ACA1_359020	join(<51819..51824,51933..51981,52066..52266,52321..52391,52525..52833,52907..52990,53177..53322,53413..>53509)	Acanthamoeba castellanii str. Neff	14914113
ACA1_359130	mRNA	ACA1_359130	NW_004457326.1	56250	58481	R	ACA1_359130	complement(join(<56250..57040,57244..57745,57816..58100,58165..58193,58307..>58481))	Acanthamoeba castellanii str. Neff	14914114
ACA1_359140	mRNA	ACA1_359140	NW_004457326.1	59276	61324	D	ACA1_359140	join(<59276..59425,59477..59564,59638..59888,59953..60061,60138..>61324)	Acanthamoeba castellanii str. Neff	14914115
ACA1_359150	mRNA	ACA1_359150	NW_004457326.1	61505	62751	R	ACA1_359150	complement(join(<61505..61971,62041..62195,62314..62447,62521..>62751))	Acanthamoeba castellanii str. Neff	14914130
ACA1_359260	mRNA	ACA1_359260	NW_004457326.1	68633	69118	R	ACA1_359260	complement(<68633..>69118)	Acanthamoeba castellanii str. Neff	14914131
ACA1_359270	mRNA	ACA1_359270	NW_004457326.1	69759	70757	R	ACA1_359270	complement(join(<69759..69998,70102..70286,70439..70507,70576..70646,70702..>70757))	Acanthamoeba castellanii str. Neff	14914132
ACA1_359280	mRNA	ACA1_359280	NW_004457326.1	71043	71849	D	ACA1_359280	join(<71043..71166,71240..71354,71461..71648,71722..>71849)	Acanthamoeba castellanii str. Neff	14914133
ACA1_305780	mRNA	ACA1_305780	NW_004457325.1	541	1238	D	ACA1_305780	join(<541..562,675..933,986..>1238)	Acanthamoeba castellanii str. Neff	14914111
ACA1_305790	mRNA	ACA1_305790	NW_004457325.1	2585	3430	R	ACA1_305790	complement(<2585..>3430)	Acanthamoeba castellanii str. Neff	14914110
ACA1_305900	mRNA	ACA1_305900	NW_004457325.1	9064	9801	R	ACA1_305900	complement(join(<9064..9075,9142..9149,9237..9729,9742..>9801))	Acanthamoeba castellanii str. Neff	14914107
ACA1_305910	mRNA	ACA1_305910	NW_004457325.1	9806	10093	R	ACA1_305910	complement(<9806..>10093)	Acanthamoeba castellanii str. Neff	14914108
ACA1_306020	mRNA	ACA1_306020	NW_004457325.1	14533	15005	D	ACA1_306020	join(<14533..14690,14801..>15005)	Acanthamoeba castellanii str. Neff	14914109
ACA1_020090	mRNA	ACA1_020090	NW_004457324.1	12	522	R	ACA1_020090	complement(join(<12..138,272..350,477..>522))	Acanthamoeba castellanii str. Neff	14914106
ACA1_020100	mRNA	ACA1_020100	NW_004457324.1	786	4323	D	ACA1_020100	join(<786..893,977..1316,1418..1491,1569..1655,1841..1877,1956..2215,2304..2609,2706..2805,2860..2970,3068..3142,3204..3367,3446..3515,3588..3684,3756..4009,4103..4174,4241..>4323)	Acanthamoeba castellanii str. Neff	14914104
ACA1_020120	mRNA	ACA1_020120	NW_004457324.1	5370	9339	D	ACA1_020120	join(<5370..5587,5699..5794,5874..5991,6058..6157,6279..6400,6484..6582,7090..7189,7227..7396,7613..7739,7793..7864,8046..8099,8208..8300,8378..8539,8712..8794,8866..8948,9099..>9339)	Acanthamoeba castellanii str. Neff	14914101
ACA1_020130	mRNA	ACA1_020130	NW_004457324.1	9381	11221	D	ACA1_020130	join(<9381..9524,9599..>11221)	Acanthamoeba castellanii str. Neff	14914102
ACA1_020140	mRNA	ACA1_020140	NW_004457324.1	11113	13105	R	ACA1_020140	complement(join(<11113..11393,11492..11622,11713..11765,11943..12023,12164..12235,12519..12641,12762..12868,12958..>13105))	Acanthamoeba castellanii str. Neff	14914103
ACA1_020150	mRNA	ACA1_020150	NW_004457324.1	13477	18192	R	ACA1_020150	complement(join(<13477..13753,13856..13921,13999..14060,14188..14281,14380..14437,14532..14646,14764..14875,14975..15052,15138..15256,15357..15528,15712..15791,15889..15993,16091..16162,16279..16509,16805..16904,17090..17261,17364..17417,17493..17562,17679..17771,17855..17931,18006..>18192))	Acanthamoeba castellanii str. Neff	14914100
ACA1_020160	mRNA	ACA1_020160	NW_004457324.1	18449	22050	R	ACA1_020160	complement(join(<18449..18541,18625..18878,18946..19362,19460..19684,19754..19922,19987..20052,20127..20307,20393..20640,20683..20817,20908..21284,21360..21537,21732..21785,21886..>22050))	Acanthamoeba castellanii str. Neff	14914105
ACA1_237760	mRNA	ACA1_237760	NW_004457323.1	8111	9452	D	ACA1_237760	join(<8111..8425,8497..8577,8664..9267,9331..>9452)	Acanthamoeba castellanii str. Neff	14914011
ACA1_237770	mRNA	ACA1_237770	NW_004457323.1	9750	12489	D	ACA1_237770	join(<9750..9916,10113..10256,10372..10499,10563..10603,10705..10771,11220..11260,11362..11428,11512..11606,11758..11940,12057..12266,12388..>12489)	Acanthamoeba castellanii str. Neff	14913934
ACA1_237780	mRNA	ACA1_237780	NW_004457323.1	12567	13153	D	ACA1_237780	join(<12567..12678,12766..12887,13007..>13153)	Acanthamoeba castellanii str. Neff	14913926
ACA1_237790	mRNA	ACA1_237790	NW_004457323.1	13496	18957	D	ACA1_237790	join(<13496..13636,13757..13788,13880..13947,14104..14287,14362..14569,14602..14934,14969..15008,15181..15275,15478..15582,15754..16091,16254..16429,16613..16866,17027..17151,17301..17472,17672..17865,18051..18307,18443..18597,18761..18904,18931..>18957)	Acanthamoeba castellanii str. Neff	14913868
ACA1_237800	mRNA	ACA1_237800	NW_004457323.1	19096	20071	D	ACA1_237800	join(<19096..19473,19622..19695,19708..19783,19892..>20071)	Acanthamoeba castellanii str. Neff	14913869
ACA1_237810	mRNA	ACA1_237810	NW_004457323.1	20479	22424	R	ACA1_237810	complement(join(<20479..20507,20747..20822,20922..21205,21327..21450,21611..21904,22149..>22424))	Acanthamoeba castellanii str. Neff	14913870
ACA1_237820	mRNA	ACA1_237820	NW_004457323.1	22701	24803	R	ACA1_237820	complement(join(<22701..22881,22984..23120,23263..23377,23510..23604,23685..23740,23897..24036,24123..24262,24306..24359,24519..>24803))	Acanthamoeba castellanii str. Neff	14913927
ACA1_237830	mRNA	ACA1_237830	NW_004457323.1	25317	26652	D	ACA1_237830	join(<25317..25357,25407..25891,26084..>26652)	Acanthamoeba castellanii str. Neff	14913928
ACA1_237840	mRNA	ACA1_237840	NW_004457323.1	26784	28888	R	ACA1_237840	complement(join(<26784..26986,27179..27251,27323..27490,27601..28550,28816..>28888))	Acanthamoeba castellanii str. Neff	14913929
ACA1_237850	mRNA	ACA1_237850	NW_004457323.1	29094	32088	D	ACA1_237850	join(<29094..29461,29804..29903,30036..30256,30572..30617,30796..31009,31179..31410,31561..31919,32057..>32088)	Acanthamoeba castellanii str. Neff	14913930
ACA1_237860	mRNA	ACA1_237860	NW_004457323.1	32307	35834	D	ACA1_237860	join(<32307..32780,32878..32994,33095..33222,33359..33441,33567..33662,33821..33904,34104..34198,34291..34391,34511..34725,34933..35084,35405..35485,35575..35651,35681..>35834)	Acanthamoeba castellanii str. Neff	14913931
ACA1_237870	mRNA	ACA1_237870	NW_004457323.1	36023	37928	D	ACA1_237870	join(<36023..36305,36454..36569,36707..36869,36977..37080,37197..37297,37438..37519,37645..37750,37843..>37928)	Acanthamoeba castellanii str. Neff	14913932
ACA1_237880	mRNA	ACA1_237880	NW_004457323.1	38126	39165	R	ACA1_237880	complement(join(<38126..38193,38274..38355,38480..38569,38638..38778,38929..>39165))	Acanthamoeba castellanii str. Neff	14913933
ACA1_237890	mRNA	ACA1_237890	NW_004457323.1	39318	40478	D	ACA1_237890	join(<39318..39540,39620..39673,39764..39889,39956..40057,40116..40188,40269..40336,40411..>40478)	Acanthamoeba castellanii str. Neff	14913994
ACA1_237900	mRNA	ACA1_237900	NW_004457323.1	50095	50522	R	ACA1_237900	complement(join(<50095..50150,50289..50413,50497..>50522))	Acanthamoeba castellanii str. Neff	14913995
ACA1_238110	mRNA	ACA1_238110	NW_004457323.1	55053	55848	R	ACA1_238110	complement(join(<55053..55211,55325..55413,55522..55615,55723..>55848))	Acanthamoeba castellanii str. Neff	14913996
ACA1_238120	mRNA	ACA1_238120	NW_004457323.1	56550	58190	R	ACA1_238120	complement(join(<56550..57616,57776..57840,57952..>58190))	Acanthamoeba castellanii str. Neff	14913997
ACA1_238130	mRNA	ACA1_238130	NW_004457323.1	58696	59820	R	ACA1_238130	complement(join(<58696..58899,59001..59119,59268..59411,59484..59609,59724..>59820))	Acanthamoeba castellanii str. Neff	14913998
ACA1_238140	mRNA	ACA1_238140	NW_004457323.1	59929	62203	R	ACA1_238140	complement(join(<59929..60054,60088..60206,60376..60520,60599..60665,60802..61321,61393..61465,61692..61748,61970..>62203))	Acanthamoeba castellanii str. Neff	14913999
ACA1_238250	mRNA	ACA1_238250	NW_004457323.1	63478	66899	D	ACA1_238250	join(<63478..63571,63721..63851,63992..64106,64287..64322,64514..64706,64786..64981,65156..65265,65419..65666,65778..65944,66015..66192,66416..66565,66709..>66899)	Acanthamoeba castellanii str. Neff	14914000
ACA1_238270	mRNA	ACA1_238270	NW_004457323.1	74120	77827	D	ACA1_238270	join(<74120..75521,75623..75835,75944..76184,76286..77060,77207..>77827)	Acanthamoeba castellanii str. Neff	14913935
ACA1_238280	mRNA	ACA1_238280	NW_004457323.1	78204	80608	R	ACA1_238280	complement(join(<78204..78210,78289..78509,78662..78920,79043..79308,79455..79689,79793..79890,80211..80324,80423..>80608))	Acanthamoeba castellanii str. Neff	14913936
ACA1_238390	mRNA	ACA1_238390	NW_004457323.1	81102	83974	R	ACA1_238390	complement(join(<81102..81212,81341..81429,81530..81599,81749..81863,81967..82034,82160..82261,82399..82445,82573..82679,82792..82863,82976..83066,83195..83276,83399..83508,83683..83714,83807..83876,83956..>83974))	Acanthamoeba castellanii str. Neff	14913937
ACA1_238400	mRNA	ACA1_238400	NW_004457323.1	84250	85683	D	ACA1_238400	join(<84250..84302,84405..84584,84696..84803,84891..85034,85176..>85683)	Acanthamoeba castellanii str. Neff	14913938
ACA1_238410	mRNA	ACA1_238410	NW_004457323.1	85979	87430	D	ACA1_238410	join(<85979..86204,86259..86416,86518..86632,86744..86806,86876..86954,87062..87161,87263..>87430)	Acanthamoeba castellanii str. Neff	14913939
ACA1_238420	mRNA	ACA1_238420	NW_004457323.1	87541	93616	R	ACA1_238420	complement(join(<87541..87641,87744..88353,88480..88596,88782..88976,89150..89212,89361..89533,89628..89722,89839..90053,90149..90283,90401..90493,90591..90681,90773..90899,90989..91050,91177..91307,91382..91490,91576..91670,91763..91888,91981..92064,92174..92237,92328..92428,92557..92637,92766..92930,93078..93300,93486..>93616))	Acanthamoeba castellanii str. Neff	14913940
ACA1_238430	mRNA	ACA1_238430	NW_004457323.1	93855	94970	D	ACA1_238430	join(<93855..93968,94054..94162,94242..94432,94537..94647,94734..>94970)	Acanthamoeba castellanii str. Neff	14913941
ACA1_238440	mRNA	ACA1_238440	NW_004457323.1	95012	95548	D	ACA1_238440	join(<95012..95115,95213..95336,95453..>95548)	Acanthamoeba castellanii str. Neff	14913942
ACA1_238450	mRNA	ACA1_238450	NW_004457323.1	95689	96983	R	ACA1_238450	complement(join(<95689..95743,95893..95952,96025..96110,96378..96471,96565..96620,96688..96784,96910..>96983))	Acanthamoeba castellanii str. Neff	14913943
ACA1_238470	mRNA	ACA1_238470	NW_004457323.1	99226	100086	R	ACA1_238470	complement(join(<99226..99290,99415..99572,99686..99735,99805..99949,100028..>100086))	Acanthamoeba castellanii str. Neff	14913962
ACA1_238580	mRNA	ACA1_238580	NW_004457323.1	102005	102512	R	ACA1_238580	complement(join(<102005..102285,102356..>102512))	Acanthamoeba castellanii str. Neff	14913963
ACA1_238590	mRNA	ACA1_238590	NW_004457323.1	102813	103841	D	ACA1_238590	join(<102813..103046,103116..103376,103484..103561,103659..>103841)	Acanthamoeba castellanii str. Neff	14913964
ACA1_238600	mRNA	ACA1_238600	NW_004457323.1	103941	106163	D	ACA1_238600	join(<103941..104048,104181..104367,104460..104554,104666..104774,104899..105024,105141..105209,105288..105345,105511..105627,105761..105825,105917..105987,106119..>106163)	Acanthamoeba castellanii str. Neff	14913965
ACA1_238610	mRNA	ACA1_238610	NW_004457323.1	106242	108296	R	ACA1_238610	complement(join(<106242..106489,106588..106760,106850..106965,107097..107538,107703..107821,107937..108036,108196..>108296))	Acanthamoeba castellanii str. Neff	14913966
ACA1_238620	mRNA	ACA1_238620	NW_004457323.1	108450	108900	D	ACA1_238620	join(<108450..108471,108548..>108900)	Acanthamoeba castellanii str. Neff	14913967
ACA1_238630	mRNA	ACA1_238630	NW_004457323.1	109020	110364	R	ACA1_238630	complement(join(<109020..109138,109213..109260,109347..109469,109559..109742,109808..110084,110168..110261,110334..>110364))	Acanthamoeba castellanii str. Neff	14913968
ACA1_238740	mRNA	ACA1_238740	NW_004457323.1	111702	113839	D	ACA1_238740	join(<111702..111986,112248..112349,112448..112621,112737..112805,112893..113000,113087..113141,113251..113279,113322..113393,113479..113605,113697..>113839)	Acanthamoeba castellanii str. Neff	14913969
ACA1_238850	mRNA	ACA1_238850	NW_004457323.1	114645	115456	D	ACA1_238850	join(<114645..114653,114725..114781,114801..114816,114966..115146,115230..115314,115373..>115456)	Acanthamoeba castellanii str. Neff	14913970
ACA1_238860	mRNA	ACA1_238860	NW_004457323.1	115899	117558	D	ACA1_238860	join(<115899..116352,116439..116561,116677..116804,116936..117128,117237..117361,117481..>117558)	Acanthamoeba castellanii str. Neff	14913971
ACA1_238870	mRNA	ACA1_238870	NW_004457323.1	117638	120187	R	ACA1_238870	complement(<117638..>120187)	Acanthamoeba castellanii str. Neff	14913907
ACA1_238880	mRNA	ACA1_238880	NW_004457323.1	120663	124344	R	ACA1_238880	complement(join(<120663..122862,123002..123192,123325..123423,123435..123730,123940..124078,124228..>124344))	Acanthamoeba castellanii str. Neff	14913908
ACA1_239090	mRNA	ACA1_239090	NW_004457323.1	129482	130570	D	ACA1_239090	join(<129482..129598,129729..129897,129961..130053,130133..130374,130493..>130570)	Acanthamoeba castellanii str. Neff	14913909
ACA1_239200	mRNA	ACA1_239200	NW_004457323.1	132392	135261	D	ACA1_239200	join(<132392..132444,132530..132675,132794..132833,133145..133198,133292..133351,133463..133599,133729..133866,134057..134108,134178..134284,134374..134490,134571..134739,134859..135054,135088..>135261)	Acanthamoeba castellanii str. Neff	14913910
ACA1_239210	mRNA	ACA1_239210	NW_004457323.1	135353	138082	R	ACA1_239210	complement(join(<135353..135382,135475..135596,135664..135796,135894..135976,136055..136223,136345..136478,136564..136657,136734..136840,137064..137222,137331..137478,137579..137691,137787..137855,137986..>138082))	Acanthamoeba castellanii str. Neff	14913911
ACA1_239220	mRNA	ACA1_239220	NW_004457323.1	138555	140215	R	ACA1_239220	complement(join(<138555..138585,138692..138774,138904..138990,139092..139205,139340..139435,139515..139649,139756..139841,139938..139999,140103..>140215))	Acanthamoeba castellanii str. Neff	14913912
ACA1_239230	mRNA	ACA1_239230	NW_004457323.1	140566	141719	D	ACA1_239230	join(<140566..140611,140701..140820,140926..141027,141128..141260,141448..141553,141639..>141719)	Acanthamoeba castellanii str. Neff	14913913
ACA1_239240	mRNA	ACA1_239240	NW_004457323.1	142381	148293	D	ACA1_239240	join(<142381..143973,144161..145487,145583..145684,145862..146008,146093..146470,146567..146777,146861..146953,147027..147131,147211..147302,147389..147784,147873..147947,148074..148196,148286..>148293)	Acanthamoeba castellanii str. Neff	14913914
ACA1_239260	mRNA	ACA1_239260	NW_004457323.1	149969	150619	D	ACA1_239260	<149969..>150619	Acanthamoeba castellanii str. Neff	14914012
ACA1_239270	mRNA	ACA1_239270	NW_004457323.1	150845	151534	R	ACA1_239270	complement(join(<150845..151072,151100..>151534))	Acanthamoeba castellanii str. Neff	14914013
ACA1_239280	mRNA	ACA1_239280	NW_004457323.1	151834	153157	R	ACA1_239280	complement(join(<151834..151909,152101..152175,152630..152730,152852..152910,153020..153099,153135..>153157))	Acanthamoeba castellanii str. Neff	14914014
ACA1_239390	mRNA	ACA1_239390	NW_004457323.1	153957	154630	D	ACA1_239390	join(<153957..154352,154625..>154630)	Acanthamoeba castellanii str. Neff	14914015
ACA1_239500	mRNA	ACA1_239500	NW_004457323.1	155419	155634	R	ACA1_239500	complement(<155419..>155634)	Acanthamoeba castellanii str. Neff	14914016
ACA1_239510	mRNA	ACA1_239510	NW_004457323.1	155871	156680	D	ACA1_239510	join(<155871..155950,156031..156134,156222..156300,156400..156469,156564..>156680)	Acanthamoeba castellanii str. Neff	14914017
ACA1_239520	mRNA	ACA1_239520	NW_004457323.1	157478	160992	R	ACA1_239520	complement(join(<157478..157669,157728..157821,157937..158310,158386..158682,158719..158945,159049..159191,159286..159504,159601..159801,159906..160009,160146..160265,160384..>160992))	Acanthamoeba castellanii str. Neff	14914018
ACA1_239540	mRNA	ACA1_239540	NW_004457323.1	164471	165418	D	ACA1_239540	join(<164471..164594,164787..164845,164888..164980,165020..>165418)	Acanthamoeba castellanii str. Neff	14914020
ACA1_239550	mRNA	ACA1_239550	NW_004457323.1	165606	166797	R	ACA1_239550	complement(join(<165606..165718,165829..165990,166092..>166797))	Acanthamoeba castellanii str. Neff	14914021
ACA1_239560	mRNA	ACA1_239560	NW_004457323.1	167798	170657	R	ACA1_239560	complement(join(<167798..167932,168038..168163,168331..168453,168556..168732,168814..168941,169021..169126,169225..169305,169466..169606,169705..170010,170113..170336,170450..>170657))	Acanthamoeba castellanii str. Neff	14914022
ACA1_239570	mRNA	ACA1_239570	NW_004457323.1	170915	171855	R	ACA1_239570	complement(join(<170915..171004,171132..171179,171250..171330,171415..171478,171553..171659,171802..>171855))	Acanthamoeba castellanii str. Neff	14914023
ACA1_239680	mRNA	ACA1_239680	NW_004457323.1	173034	175505	D	ACA1_239680	join(<173034..173223,173316..173381,173460..173674,173811..173959,174070..174234,174304..174427,174692..174779,174875..174981,175065..175134,175221..175334,175420..>175505)	Acanthamoeba castellanii str. Neff	14914024
ACA1_239790	mRNA	ACA1_239790	NW_004457323.1	175617	177107	R	ACA1_239790	complement(join(<175617..175775,175860..175985,176104..176186,176479..176607,176684..176918,177021..>177107))	Acanthamoeba castellanii str. Neff	14914079
ACA1_239800	mRNA	ACA1_239800	NW_004457323.1	177287	178967	R	ACA1_239800	complement(join(<177287..177420,177541..177655,177809..177877,177978..178051,178129..178186,178306..178491,178605..178812,178966..>178967))	Acanthamoeba castellanii str. Neff	14914080
ACA1_239910	mRNA	ACA1_239910	NW_004457323.1	179504	181092	R	ACA1_239910	complement(join(<179504..179694,179808..179960,180046..180172,180296..180350,180465..180575,180685..180773,180860..180943,181012..>181092))	Acanthamoeba castellanii str. Neff	14914081
ACA1_239920	mRNA	ACA1_239920	NW_004457323.1	182848	183262	D	ACA1_239920	join(<182848..182980,183058..183169,183256..>183262)	Acanthamoeba castellanii str. Neff	14914082
ACA1_239930	mRNA	ACA1_239930	NW_004457323.1	184682	186773	R	ACA1_239930	complement(join(<184682..184887,185001..185210,185281..185405,185591..185709,185789..185947,186232..186519,186597..>186773))	Acanthamoeba castellanii str. Neff	14914083
ACA1_239940	mRNA	ACA1_239940	NW_004457323.1	186875	187321	D	ACA1_239940	join(<186875..186976,187063..187127,187192..>187321)	Acanthamoeba castellanii str. Neff	14914084
ACA1_239950	mRNA	ACA1_239950	NW_004457323.1	187543	187990	D	ACA1_239950	join(<187543..187600,187693..187849,187948..>187990)	Acanthamoeba castellanii str. Neff	14914085
ACA1_240060	mRNA	ACA1_240060	NW_004457323.1	191394	191990	R	ACA1_240060	complement(join(<191394..191490,191565..191650,191732..191820,191900..>191990))	Acanthamoeba castellanii str. Neff	14914086
ACA1_240070	mRNA	ACA1_240070	NW_004457323.1	193889	196640	R	ACA1_240070	complement(join(<193889..194178,194252..194446,194557..194641,194689..194838,194959..195088,195183..195275,195378..195582,195663..195782,195880..195942,196059..196147,196226..196311,196390..196478,196550..>196640))	Acanthamoeba castellanii str. Neff	14914087
ACA1_240180	mRNA	ACA1_240180	NW_004457323.1	200900	203471	D	ACA1_240180	join(<200900..201000,201144..201250,201330..201431,201492..201601,201751..201948,202068..202206,202305..202465,202950..203096,203203..203314,203413..>203471)	Acanthamoeba castellanii str. Neff	14914088
ACA1_240290	mRNA	ACA1_240290	NW_004457323.1	203604	206190	D	ACA1_240290	join(<203604..203691,203769..204025,204234..204323,204411..204438,204526..204656,204755..204802,204875..204983,205088..205198,205310..205416,205495..205570,205716..205862,205973..>206190)	Acanthamoeba castellanii str. Neff	14913944
ACA1_240300	mRNA	ACA1_240300	NW_004457323.1	206431	207139	D	ACA1_240300	join(<206431..206825,206923..>207139)	Acanthamoeba castellanii str. Neff	14913945
ACA1_240310	mRNA	ACA1_240310	NW_004457323.1	207217	208138	R	ACA1_240310	complement(join(<207217..207646,207738..>208138))	Acanthamoeba castellanii str. Neff	14913946
ACA1_240320	mRNA	ACA1_240320	NW_004457323.1	208806	209961	R	ACA1_240320	complement(join(<208806..208942,209040..209111,209216..209330,209444..209654,209915..>209961))	Acanthamoeba castellanii str. Neff	14913947
ACA1_240330	mRNA	ACA1_240330	NW_004457323.1	210126	212762	D	ACA1_240330	join(<210126..210145,210274..210371,210499..210606,210731..210815,210928..211018,211146..211269,211339..211414,211539..211626,211740..211831,211944..212005,212123..212239,212319..212367,212498..212606,212709..>212762)	Acanthamoeba castellanii str. Neff	14913948
ACA1_240340	mRNA	ACA1_240340	NW_004457323.1	213013	214908	R	ACA1_240340	complement(join(<213013..213160,213280..213433,213571..213677,213768..213920,214041..214201,214270..214620,214708..>214908))	Acanthamoeba castellanii str. Neff	14913949
ACA1_240350	mRNA	ACA1_240350	NW_004457323.1	215075	223958	D	ACA1_240350	join(<215075..215480,215609..215779,215853..215956,216046..216159,216274..216381,216473..216632,216731..216852,216935..217009,217110..217238,217381..217667,217764..218061,218101..218235,218321..218409,218479..218581,218666..218949,219056..219122,219218..219355,219433..219540,219617..219688,219781..220053,220128..220211,220289..220372,220435..220509,220604..220681,220718..220812,220898..220972,221059..221154,221187..221312,221376..221441,221532..221598,221720..221836,221920..222083,222188..222391,222485..222808,222884..>223958)	Acanthamoeba castellanii str. Neff	14913950
ACA1_240360	mRNA	ACA1_240360	NW_004457323.1	225891	227438	D	ACA1_240360	join(<225891..226286,226426..227124,227205..>227438)	Acanthamoeba castellanii str. Neff	14913951
ACA1_240370	mRNA	ACA1_240370	NW_004457323.1	227699	228077	R	ACA1_240370	complement(join(<227699..227846,227977..>228077))	Acanthamoeba castellanii str. Neff	14914002
ACA1_240380	mRNA	ACA1_240380	NW_004457323.1	228096	229063	R	ACA1_240380	complement(join(<228096..228236,228313..228672,228802..228899,228973..>229063))	Acanthamoeba castellanii str. Neff	14914003
ACA1_240390	mRNA	ACA1_240390	NW_004457323.1	230021	232431	D	ACA1_240390	join(<230021..230093,230180..230233,230353..230450,230522..230623,230750..230924,231024..231152,231275..231401,231560..231672,231788..232011,232089..232240,232374..>232431)	Acanthamoeba castellanii str. Neff	14914004
ACA1_240500	mRNA	ACA1_240500	NW_004457323.1	233422	239383	D	ACA1_240500	join(<233422..233598,233726..234005,234225..234340,234547..234697,234729..234857,234948..235048,235138..235195,235214..235294,235380..235553,235632..235778,236097..236276,236369..236412,236953..237010,237029..237109,237197..237367,237449..237595,237788..237846,238940..>239383)	Acanthamoeba castellanii str. Neff	14914005
ACA1_240710	mRNA	ACA1_240710	NW_004457323.1	239549	239764	R	ACA1_240710	complement(<239549..>239764)	Acanthamoeba castellanii str. Neff	14914006
ACA1_240820	mRNA	ACA1_240820	NW_004457323.1	240570	241250	D	ACA1_240820	<240570..>241250	Acanthamoeba castellanii str. Neff	14914007
ACA1_240830	mRNA	ACA1_240830	NW_004457323.1	241878	244351	R	ACA1_240830	complement(join(<241878..242369,242380..242386,242507..242919,243023..243241,243316..243461,243556..243685,243769..244003,244073..244189,244287..>244351))	Acanthamoeba castellanii str. Neff	14914008
ACA1_241040	mRNA	ACA1_241040	NW_004457323.1	244562	245135	R	ACA1_241040	complement(join(<244562..244598,244630..244960,245063..>245135))	Acanthamoeba castellanii str. Neff	14914009
ACA1_241150	mRNA	ACA1_241150	NW_004457323.1	246426	248213	R	ACA1_241150	complement(join(<246426..246611,246678..246906,246963..247495,247661..247799,247879..248000,248085..>248213))	Acanthamoeba castellanii str. Neff	14914010
ACA1_241260	mRNA	ACA1_241260	NW_004457323.1	248345	250152	R	ACA1_241260	complement(join(<248345..248436,248538..248608,248714..248862,248961..249047,249105..249278,249351..249625,249707..249762,249842..249960,250030..>250152))	Acanthamoeba castellanii str. Neff	14913884
ACA1_241370	mRNA	ACA1_241370	NW_004457323.1	251663	253722	D	ACA1_241370	join(<251663..251688,251759..251834,251893..251991,252054..252336,252402..252500,252563..252708,252877..253036,253102..253200,253265..253410,253477..>253722)	Acanthamoeba castellanii str. Neff	14913885
ACA1_241490	mRNA	ACA1_241490	NW_004457323.1	257847	258353	D	ACA1_241490	join(<257847..257865,257988..258324,258338..>258353)	Acanthamoeba castellanii str. Neff	14913887
ACA1_241600	mRNA	ACA1_241600	NW_004457323.1	262486	262980	D	ACA1_241600	join(<262486..262863,262921..>262980)	Acanthamoeba castellanii str. Neff	14913888
ACA1_241610	mRNA	ACA1_241610	NW_004457323.1	263276	264756	D	ACA1_241610	join(<263276..263328,263421..263643,263804..263911,264097..264181,264287..>264756)	Acanthamoeba castellanii str. Neff	14913889
ACA1_241720	mRNA	ACA1_241720	NW_004457323.1	265230	267218	R	ACA1_241720	complement(join(<265230..265345,265360..265371,265475..265550,265626..265741,265828..265880,266011..266088,266165..266266,266425..266483,266600..266684,266779..266873,266948..267050,267169..>267218))	Acanthamoeba castellanii str. Neff	14913890
ACA1_241830	mRNA	ACA1_241830	NW_004457323.1	268475	271625	D	ACA1_241830	join(<268475..268656,268753..268874,268982..269051,269113..269160,269517..269700,269771..269872,269970..270063,270177..270304,270386..270455,270543..270603,270624..270656,270762..270840,270930..271185,271218..271274,271300..>271625)	Acanthamoeba castellanii str. Neff	14913891
ACA1_242040	mRNA	ACA1_242040	NW_004457323.1	271779	272027	R	ACA1_242040	complement(<271779..>272027)	Acanthamoeba castellanii str. Neff	14913892
ACA1_242050	mRNA	ACA1_242050	NW_004457323.1	272702	273600	R	ACA1_242050	complement(join(<272702..272873,272896..273030,273107..273222,273300..273331,273413..273563,273574..>273600))	Acanthamoeba castellanii str. Neff	14913893
ACA1_242060	mRNA	ACA1_242060	NW_004457323.1	274061	275603	D	ACA1_242060	join(<274061..274151,274325..274451,274526..274666,274904..275013,275148..275282,275362..275450,275561..>275603)	Acanthamoeba castellanii str. Neff	14913894
ACA1_242170	mRNA	ACA1_242170	NW_004457323.1	275790	276200	D	ACA1_242170	<275790..>276200	Acanthamoeba castellanii str. Neff	14914037
ACA1_242180	mRNA	ACA1_242180	NW_004457323.1	279851	282558	R	ACA1_242180	complement(join(<279851..279877,280305..280766,281192..281298,281374..281430,281547..281609,281693..281854,281979..282085,282161..282268,282542..>282558))	Acanthamoeba castellanii str. Neff	14914038
ACA1_242390	mRNA	ACA1_242390	NW_004457323.1	283527	292430	D	ACA1_242390	join(<283527..283569,283664..283763,284159..284251,284369..284482,284729..284814,284906..285048,285332..285411,285517..285592,285677..285852,285935..286015,287241..287367,287457..287519,287701..287828,287890..288005,288101..288234,288409..288621,288729..288838,288969..289051,289171..289261,289377..289464,289644..289869,289961..290007,290150..290218,290308..290403,290516..290596,290702..290926,291080..291829,291939..>292430)	Acanthamoeba castellanii str. Neff	14914039
ACA1_242500	mRNA	ACA1_242500	NW_004457323.1	292886	302093	D	ACA1_242500	join(<292886..293035,293124..293197,293281..293398,293484..293553,293666..293767,293849..293951,294025..294165,294252..294399,294515..295904,295977..296561,296628..296765,296969..297134,297208..297348,298108..298247,298324..298829,301703..301876,301938..>302093)	Acanthamoeba castellanii str. Neff	14914040
ACA1_242810	mRNA	ACA1_242810	NW_004457323.1	302672	303130	R	ACA1_242810	complement(join(<302672..302998,303062..>303130))	Acanthamoeba castellanii str. Neff	14914041
ACA1_243140	mRNA	ACA1_243140	NW_004457323.1	317654	319139	D	ACA1_243140	join(<317654..317780,318601..318884,318940..318986,319101..>319139)	Acanthamoeba castellanii str. Neff	14914044
ACA1_243150	mRNA	ACA1_243150	NW_004457323.1	320421	321496	D	ACA1_243150	join(<320421..320822,321136..321228,321281..>321496)	Acanthamoeba castellanii str. Neff	14914045
ACA1_243160	mRNA	ACA1_243160	NW_004457323.1	322209	325535	D	ACA1_243160	join(<322209..322422,322480..322523,322688..322897,322974..323118,323193..323279,323363..323730,323814..323902,323968..324162,324224..324384,324443..324538,324599..324757,324825..324903,324976..325244,325306..>325535)	Acanthamoeba castellanii str. Neff	14914046
ACA1_243170	mRNA	ACA1_243170	NW_004457323.1	326122	327075	R	ACA1_243170	complement(join(<326122..326145,326166..326291,326477..326562,326678..326781,326978..>327075))	Acanthamoeba castellanii str. Neff	14914056
ACA1_243280	mRNA	ACA1_243280	NW_004457323.1	328725	329179	R	ACA1_243280	complement(join(<328725..328759,328864..>329179))	Acanthamoeba castellanii str. Neff	14914057
ACA1_243390	mRNA	ACA1_243390	NW_004457323.1	332198	332714	D	ACA1_243390	join(<332198..332228,332322..332441,332533..>332714)	Acanthamoeba castellanii str. Neff	14914058
ACA1_243400	mRNA	ACA1_243400	NW_004457323.1	333007	334455	D	ACA1_243400	join(<333007..333291,333384..333500,333580..333679,333796..334275,334355..>334455)	Acanthamoeba castellanii str. Neff	14914059
ACA1_243410	mRNA	ACA1_243410	NW_004457323.1	334918	335660	R	ACA1_243410	complement(join(<334918..335282,335415..335514,335622..>335660))	Acanthamoeba castellanii str. Neff	14914060
ACA1_243420	mRNA	ACA1_243420	NW_004457323.1	336343	338135	D	ACA1_243420	join(<336343..336388,336499..336648,336870..336958,336970..336996,337087..337161,337294..337399,337499..337530,337635..337709,337842..337947,338047..>338135)	Acanthamoeba castellanii str. Neff	14914061
ACA1_243430	mRNA	ACA1_243430	NW_004457323.1	338827	340137	D	ACA1_243430	<338827..>340137	Acanthamoeba castellanii str. Neff	14914062
ACA1_243440	mRNA	ACA1_243440	NW_004457323.1	340557	342060	D	ACA1_243440	join(<340557..341550,341657..>342060)	Acanthamoeba castellanii str. Neff	14914063
ACA1_243450	mRNA	ACA1_243450	NW_004457323.1	342353	343074	D	ACA1_243450	join(<342353..342383,342569..342694,342809..342881,342981..>343074)	Acanthamoeba castellanii str. Neff	14914064
ACA1_243560	mRNA	ACA1_243560	NW_004457323.1	344022	346442	D	ACA1_243560	join(<344022..344171,344291..344363,344452..344535,344603..344675,344810..344853,344967..345046,345136..345237,345324..345468,345599..345779,345858..345936,346085..346167,346355..>346442)	Acanthamoeba castellanii str. Neff	14914065
ACA1_243570	mRNA	ACA1_243570	NW_004457323.1	347333	348558	D	ACA1_243570	join(<347333..347563,347912..347990,348104..>348558)	Acanthamoeba castellanii str. Neff	14914066
ACA1_243580	mRNA	ACA1_243580	NW_004457323.1	348941	349334	D	ACA1_243580	join(<348941..349038,349053..349148,349322..>349334)	Acanthamoeba castellanii str. Neff	14913839
ACA1_243590	mRNA	ACA1_243590	NW_004457323.1	350017	352023	D	ACA1_243590	join(<350017..350265,350341..350616,350702..350786,350904..350993,351054..351163,351246..351377,351459..351582,351661..351765,351842..>352023)	Acanthamoeba castellanii str. Neff	14913840
ACA1_243600	mRNA	ACA1_243600	NW_004457323.1	353058	353300	D	ACA1_243600	<353058..>353300	Acanthamoeba castellanii str. Neff	14913841
ACA1_243610	mRNA	ACA1_243610	NW_004457323.1	353725	354687	R	ACA1_243610	complement(<353725..>354687)	Acanthamoeba castellanii str. Neff	14913842
ACA1_243620	mRNA	ACA1_243620	NW_004457323.1	354991	356309	D	ACA1_243620	join(<354991..355153,355279..355430,355854..355971,356033..356158,356235..356277,356294..>356309)	Acanthamoeba castellanii str. Neff	14913843
ACA1_243830	mRNA	ACA1_243830	NW_004457323.1	357635	358134	R	ACA1_243830	complement(join(<357635..357646,357766..>358134))	Acanthamoeba castellanii str. Neff	14913844
ACA1_243840	mRNA	ACA1_243840	NW_004457323.1	358431	360312	D	ACA1_243840	join(<358431..358989,359000..359031,359134..>360312)	Acanthamoeba castellanii str. Neff	14913845
ACA1_243850	mRNA	ACA1_243850	NW_004457323.1	360615	365807	D	ACA1_243850	join(<360615..360729,360802..360846,360972..361061,361129..361267,361395..361546,361625..361801,361890..362110,362199..362555,362617..362810,362937..363141,363236..363575,363722..364113,364255..364332,364421..364706,364888..365287,365375..365494,365570..>365807)	Acanthamoeba castellanii str. Neff	14913846
ACA1_244060	mRNA	ACA1_244060	NW_004457323.1	366884	367196	D	ACA1_244060	join(<366884..367097,367165..>367196)	Acanthamoeba castellanii str. Neff	14913847
ACA1_244070	mRNA	ACA1_244070	NW_004457323.1	368410	370579	R	ACA1_244070	complement(join(<368410..368785,368885..369016,369108..369206,369316..369509,369600..369691,369765..369867,369972..370045,370126..370217,370329..>370579))	Acanthamoeba castellanii str. Neff	14913848
ACA1_244080	mRNA	ACA1_244080	NW_004457323.1	370933	372454	D	ACA1_244080	join(<370933..371001,371013..371038,371170..371339,371403..371800,371897..372178,372242..>372454)	Acanthamoeba castellanii str. Neff	14913849
ACA1_244090	mRNA	ACA1_244090	NW_004457323.1	372632	373806	R	ACA1_244090	complement(join(<372632..372720,372835..373010,373163..373483,373583..373667,373764..>373806))	Acanthamoeba castellanii str. Neff	14913916
ACA1_244100	mRNA	ACA1_244100	NW_004457323.1	374692	377955	D	ACA1_244100	join(<374692..374739,374777..375875,376091..376179,376397..376541,376610..376650,376748..376897,377089..377211,377294..377387,377468..377584,377771..>377955)	Acanthamoeba castellanii str. Neff	14913917
ACA1_244110	mRNA	ACA1_244110	NW_004457323.1	378050	378301	D	ACA1_244110	<378050..>378301	Acanthamoeba castellanii str. Neff	14913918
ACA1_244120	mRNA	ACA1_244120	NW_004457323.1	378685	380319	D	ACA1_244120	join(<378685..378714,378776..378922,378989..379101,379158..379346,379418..379739,379872..379944,380135..>380319)	Acanthamoeba castellanii str. Neff	14913919
ACA1_244230	mRNA	ACA1_244230	NW_004457323.1	380515	381961	D	ACA1_244230	join(<380515..380733,380829..380963,381034..381113,381215..381356,381452..381668,381759..>381961)	Acanthamoeba castellanii str. Neff	14913920
ACA1_244340	mRNA	ACA1_244340	NW_004457323.1	383287	384018	D	ACA1_244340	join(<383287..383566,383681..383799,383872..>384018)	Acanthamoeba castellanii str. Neff	14913921
ACA1_244350	mRNA	ACA1_244350	NW_004457323.1	384121	385802	D	ACA1_244350	join(<384121..384196,384265..384401,384722..384850,384944..385152,385221..385305,385389..>385802)	Acanthamoeba castellanii str. Neff	14913922
ACA1_244360	mRNA	ACA1_244360	NW_004457323.1	385946	387774	R	ACA1_244360	complement(join(<385946..386159,386237..>387774))	Acanthamoeba castellanii str. Neff	14913923
ACA1_244370	mRNA	ACA1_244370	NW_004457323.1	388386	389846	R	ACA1_244370	complement(join(<388386..388454,388520..388639,388748..388826,388931..388946,389091..389199,389334..>389846))	Acanthamoeba castellanii str. Neff	14913924
ACA1_244380	mRNA	ACA1_244380	NW_004457323.1	390466	394611	D	ACA1_244380	join(<390466..391038,391260..391377,391455..391831,391923..392012,392133..392180,392295..392423,392561..392758,392890..393472,393605..393825,394022..394144,394213..394297,394381..394454,394528..>394611)	Acanthamoeba castellanii str. Neff	14913925
ACA1_244390	mRNA	ACA1_244390	NW_004457323.1	394858	395316	R	ACA1_244390	complement(join(<394858..395133,395152..>395316))	Acanthamoeba castellanii str. Neff	14913859
ACA1_244400	mRNA	ACA1_244400	NW_004457323.1	395965	396489	R	ACA1_244400	complement(join(<395965..396252,396472..>396489))	Acanthamoeba castellanii str. Neff	14913860
ACA1_244410	mRNA	ACA1_244410	NW_004457323.1	397068	397317	R	ACA1_244410	complement(join(<397068..397097,397132..>397317))	Acanthamoeba castellanii str. Neff	14913861
ACA1_244520	mRNA	ACA1_244520	NW_004457323.1	397838	398376	D	ACA1_244520	join(<397838..397890,397976..398049,398123..>398376)	Acanthamoeba castellanii str. Neff	14913862
ACA1_244530	mRNA	ACA1_244530	NW_004457323.1	399550	401922	R	ACA1_244530	complement(join(<399550..399766,399817..399863,400028..400337,400543..400623,400877..400958,401042..401129,401216..401259,401346..401395,401516..401579,401699..401760,401834..>401922))	Acanthamoeba castellanii str. Neff	14913863
ACA1_244640	mRNA	ACA1_244640	NW_004457323.1	402525	405672	R	ACA1_244640	complement(join(<402525..402560,402831..403140,403265..403345,403450..403531,403609..403696,403783..403826,403913..403962,404033..404116,404201..404342,404479..404808,404820..404858,404944..405025,405104..405191,405266..405353,405429..405498,405595..>405672))	Acanthamoeba castellanii str. Neff	14913864
ACA1_244750	mRNA	ACA1_244750	NW_004457323.1	406325	408183	R	ACA1_244750	complement(join(<406325..406538,406618..406793,406872..407046,407127..407279,407391..407699,407777..407840,407960..408021,408095..>408183))	Acanthamoeba castellanii str. Neff	14913865
ACA1_244760	mRNA	ACA1_244760	NW_004457323.1	409195	412745	R	ACA1_244760	complement(join(<409195..409278,409367..409552,409649..409817,409898..409989,410088..410198,410280..410578,410668..410797,410886..411167,411251..411555,411656..411741,411825..411957,412035..412101,412181..412458,412571..>412745))	Acanthamoeba castellanii str. Neff	14913866
ACA1_244770	mRNA	ACA1_244770	NW_004457323.1	413457	422198	R	ACA1_244770	complement(join(<413457..414100,414194..414391,414498..414659,414769..415879,415969..416345,416437..416965,417057..417973,418098..418277,418377..418477,418547..419007,419089..419175,419286..419399,419574..419661,419791..419921,420007..420144,420245..420327,420409..420537,420629..420738,420853..420965,421046..421315,421451..421504,421588..421758,421790..421863,421958..>422198))	Acanthamoeba castellanii str. Neff	14913867
ACA1_244780	mRNA	ACA1_244780	NW_004457323.1	422482	423031	R	ACA1_244780	complement(join(<422482..422565,422621..>423031))	Acanthamoeba castellanii str. Neff	14913850
ACA1_244790	mRNA	ACA1_244790	NW_004457323.1	423318	425773	R	ACA1_244790	complement(join(<423318..423514,423852..423918,423987..424123,424198..424325,424405..424474,424562..424687,424798..424905,424983..425079,425258..425309,425376..425606,425673..>425773))	Acanthamoeba castellanii str. Neff	14913851
ACA1_244800	mRNA	ACA1_244800	NW_004457323.1	425932	426759	R	ACA1_244800	complement(join(<425932..426022,426105..426164,426233..426306,426390..426478,426573..>426759))	Acanthamoeba castellanii str. Neff	14913852
ACA1_244810	mRNA	ACA1_244810	NW_004457323.1	427052	428479	R	ACA1_244810	complement(join(<427052..427225,427362..427419,427504..427580,427663..427704,427920..428041,428114..428179,428258..428336,428414..>428479))	Acanthamoeba castellanii str. Neff	14913853
ACA1_244820	mRNA	ACA1_244820	NW_004457323.1	429130	432795	D	ACA1_244820	join(<429130..429501,429600..429653,429732..429796,429891..430005,430121..430198,430295..430342,430369..430417,430500..430910,431032..431166,431281..431348,431450..431608,431675..431759,431853..432044,432152..432282,432388..>432795)	Acanthamoeba castellanii str. Neff	14913854
ACA1_244830	mRNA	ACA1_244830	NW_004457323.1	435834	436183	R	ACA1_244830	complement(join(<435834..435914,436001..436056,436123..>436183))	Acanthamoeba castellanii str. Neff	14913855
ACA1_244840	mRNA	ACA1_244840	NW_004457323.1	436777	437885	D	ACA1_244840	join(<436777..437059,437154..437256,437330..437395,437486..437612,437682..>437885)	Acanthamoeba castellanii str. Neff	14913856
ACA1_244850	mRNA	ACA1_244850	NW_004457323.1	438033	440732	D	ACA1_244850	join(<438033..438135,438293..438379,438471..438630,438713..438795,438837..438946,439039..439114,439239..439316,439428..439588,439734..439848,439970..440057,440184..440281,440371..440505,440641..>440732)	Acanthamoeba castellanii str. Neff	14913857
ACA1_244860	mRNA	ACA1_244860	NW_004457323.1	440792	444806	R	ACA1_244860	complement(join(<440792..440815,440922..441601,441688..442014,442116..442316,442381..442524,442591..442897,442957..443210,443291..443409,443485..443791,443825..443879,443986..444212,444290..>444806))	Acanthamoeba castellanii str. Neff	14913858
ACA1_244870	mRNA	ACA1_244870	NW_004457323.1	445401	447369	D	ACA1_244870	join(<445401..445491,445568..445668,445741..445881,446061..446094,446203..446357,446482..446560,446660..446739,446805..446982,447092..447172,447263..>447369)	Acanthamoeba castellanii str. Neff	14914089
ACA1_244880	mRNA	ACA1_244880	NW_004457323.1	447530	448653	R	ACA1_244880	complement(join(<447530..447646,447778..447835,447902..448024,448110..448177,448252..448342,448478..>448653))	Acanthamoeba castellanii str. Neff	14914090
ACA1_244890	mRNA	ACA1_244890	NW_004457323.1	448736	452640	R	ACA1_244890	complement(join(<448736..448916,448985..449336,449439..449700,449771..449904,449982..450311,450372..450675,450751..450875,450948..451183,451260..451416,451483..451723,451793..452022,452101..452250,452358..>452640))	Acanthamoeba castellanii str. Neff	14914091
ACA1_244900	mRNA	ACA1_244900	NW_004457323.1	455501	456352	D	ACA1_244900	join(<455501..455960,456084..456240,456262..>456352)	Acanthamoeba castellanii str. Neff	14914092
ACA1_244910	mRNA	ACA1_244910	NW_004457323.1	456356	456899	D	ACA1_244910	join(<456356..456606,456670..456784,456855..>456899)	Acanthamoeba castellanii str. Neff	14914093
ACA1_244920	mRNA	ACA1_244920	NW_004457323.1	457831	458574	D	ACA1_244920	join(<457831..457886,457905..>458574)	Acanthamoeba castellanii str. Neff	14914094
ACA1_244930	mRNA	ACA1_244930	NW_004457323.1	458915	460858	D	ACA1_244930	join(<458915..459126,459207..459325,459400..459476,459601..459878,459963..460219,460315..460523,460613..>460858)	Acanthamoeba castellanii str. Neff	14914095
ACA1_244950	mRNA	ACA1_244950	NW_004457323.1	463211	464529	D	ACA1_244950	join(<463211..463406,463520..463612,463915..464058,464124..464251,464317..464439,464482..>464529)	Acanthamoeba castellanii str. Neff	14914097
ACA1_245060	mRNA	ACA1_245060	NW_004457323.1	464799	466486	D	ACA1_245060	join(<464799..465504,465585..465695,465828..>466486)	Acanthamoeba castellanii str. Neff	14914098
ACA1_245070	mRNA	ACA1_245070	NW_004457323.1	466564	468079	R	ACA1_245070	complement(join(<466564..466739,466829..466979,467093..467207,467313..467622,467725..467796,467965..>468079))	Acanthamoeba castellanii str. Neff	14914025
ACA1_245080	mRNA	ACA1_245080	NW_004457323.1	468861	469340	D	ACA1_245080	join(<468861..468962,469031..469195,469293..>469340)	Acanthamoeba castellanii str. Neff	14914026
ACA1_245090	mRNA	ACA1_245090	NW_004457323.1	469531	470202	R	ACA1_245090	complement(<469531..>470202)	Acanthamoeba castellanii str. Neff	14914027
ACA1_245300	mRNA	ACA1_245300	NW_004457323.1	471878	472468	D	ACA1_245300	<471878..>472468	Acanthamoeba castellanii str. Neff	14914028
ACA1_245410	mRNA	ACA1_245410	NW_004457323.1	473679	475190	D	ACA1_245410	join(<473679..474008,474091..474161,474284..474448,474552..474729,474817..474984,475062..>475190)	Acanthamoeba castellanii str. Neff	14914029
ACA1_245420	mRNA	ACA1_245420	NW_004457323.1	475694	477943	D	ACA1_245420	join(<475694..475853,475948..477710,477839..>477943)	Acanthamoeba castellanii str. Neff	14914030
ACA1_245430	mRNA	ACA1_245430	NW_004457323.1	478884	480829	R	ACA1_245430	complement(join(<478884..479066,479148..479245,479361..479424,479516..479602,479914..479968,480058..480131,480221..480315,480384..480498,480577..480627,480707..>480829))	Acanthamoeba castellanii str. Neff	14914031
ACA1_245440	mRNA	ACA1_245440	NW_004457323.1	481308	482729	D	ACA1_245440	join(<481308..481424,481570..481676,481766..481817,481895..481935,482037..482081,482189..482285,482384..482450,482557..>482729)	Acanthamoeba castellanii str. Neff	14914032
ACA1_245460	mRNA	ACA1_245460	NW_004457323.1	491774	493291	D	ACA1_245460	join(<491774..491866,492036..492056,492079..492173,492279..492366,492447..492685,492760..>493291)	Acanthamoeba castellanii str. Neff	14914034
ACA1_245470	mRNA	ACA1_245470	NW_004457323.1	493631	494082	D	ACA1_245470	join(<493631..493760,493848..493953,494010..>494082)	Acanthamoeba castellanii str. Neff	14914035
ACA1_245480	mRNA	ACA1_245480	NW_004457323.1	494119	494760	R	ACA1_245480	complement(<494119..>494760)	Acanthamoeba castellanii str. Neff	14914036
ACA1_245490	mRNA	ACA1_245490	NW_004457323.1	495390	495978	R	ACA1_245490	complement(join(<495390..495604,495771..>495978))	Acanthamoeba castellanii str. Neff	14914067
ACA1_245500	mRNA	ACA1_245500	NW_004457323.1	496382	497287	D	ACA1_245500	join(<496382..496605,496700..496838,496904..497056,497159..>497287)	Acanthamoeba castellanii str. Neff	14914068
ACA1_245510	mRNA	ACA1_245510	NW_004457323.1	498500	501291	D	ACA1_245510	join(<498500..498620,498737..498860,499096..499203,499284..499432,499542..499711,499779..500517,500606..>501291)	Acanthamoeba castellanii str. Neff	14914069
ACA1_245520	mRNA	ACA1_245520	NW_004457323.1	501811	501900	R	ACA1_245520	complement(<501811..>501900)	Acanthamoeba castellanii str. Neff	14914070
ACA1_245630	mRNA	ACA1_245630	NW_004457323.1	504130	507144	D	ACA1_245630	join(<504130..504250,504368..504405,504544..504605,504785..504892,504975..505123,505232..505401,505475..505678,505808..505924,506074..506180,506406..506457,506535..506575,506670..506714,506824..506920,507019..>507144)	Acanthamoeba castellanii str. Neff	14914071
ACA1_245650	mRNA	ACA1_245650	NW_004457323.1	513629	514924	R	ACA1_245650	complement(<513629..>514924)	Acanthamoeba castellanii str. Neff	14914073
ACA1_245660	mRNA	ACA1_245660	NW_004457323.1	515442	517099	R	ACA1_245660	complement(join(<515442..515695,515808..516220,516274..516351,516490..516751,516847..>517099))	Acanthamoeba castellanii str. Neff	14914074
ACA1_245670	mRNA	ACA1_245670	NW_004457323.1	517383	518891	R	ACA1_245670	complement(join(<517383..517541,517650..517775,517821..517937,518041..518144,518241..518608,518806..>518891))	Acanthamoeba castellanii str. Neff	14914075
ACA1_245680	mRNA	ACA1_245680	NW_004457323.1	519649	520728	D	ACA1_245680	join(<519649..520578,520660..>520728)	Acanthamoeba castellanii str. Neff	14914076
ACA1_245690	mRNA	ACA1_245690	NW_004457323.1	520922	521937	R	ACA1_245690	complement(join(<520922..521035,521104..521198,521279..521360,521416..521510,521586..521649,521718..521789,521866..>521937))	Acanthamoeba castellanii str. Neff	14914077
ACA1_245700	mRNA	ACA1_245700	NW_004457323.1	522940	523773	D	ACA1_245700	join(<522940..523218,523264..>523773)	Acanthamoeba castellanii str. Neff	14914078
ACA1_245710	mRNA	ACA1_245710	NW_004457323.1	524555	524873	R	ACA1_245710	complement(join(<524555..524796,524840..>524873))	Acanthamoeba castellanii str. Neff	14913895
ACA1_245720	mRNA	ACA1_245720	NW_004457323.1	525229	526146	D	ACA1_245720	join(<525229..525838,525934..525998,526072..>526146)	Acanthamoeba castellanii str. Neff	14913896
ACA1_245830	mRNA	ACA1_245830	NW_004457323.1	526303	527231	R	ACA1_245830	complement(join(<526303..526400,526514..526577,526669..526755,526835..526889,526980..527053,527139..>527231))	Acanthamoeba castellanii str. Neff	14913897
ACA1_245940	mRNA	ACA1_245940	NW_004457323.1	528843	530833	D	ACA1_245940	join(<528843..528852,529089..529175,529281..529382,529480..529549,529683..529806,529896..529980,530077..530591,530669..>530833)	Acanthamoeba castellanii str. Neff	14913898
ACA1_245950	mRNA	ACA1_245950	NW_004457323.1	531252	531775	D	ACA1_245950	join(<531252..531272,531356..>531775)	Acanthamoeba castellanii str. Neff	14913899
ACA1_245960	mRNA	ACA1_245960	NW_004457323.1	531859	532343	R	ACA1_245960	complement(join(<531859..531897,531920..532239,532307..>532343))	Acanthamoeba castellanii str. Neff	14913900
ACA1_245970	mRNA	ACA1_245970	NW_004457323.1	532647	532905	D	ACA1_245970	join(<532647..532861,532878..>532905)	Acanthamoeba castellanii str. Neff	14913901
ACA1_246080	mRNA	ACA1_246080	NW_004457323.1	533248	534177	D	ACA1_246080	join(<533248..533369,533382..>534177)	Acanthamoeba castellanii str. Neff	14913902
ACA1_246090	mRNA	ACA1_246090	NW_004457323.1	534811	535334	D	ACA1_246090	join(<534811..534837,534912..>535334)	Acanthamoeba castellanii str. Neff	14913903
ACA1_246100	mRNA	ACA1_246100	NW_004457323.1	535487	537668	R	ACA1_246100	complement(join(<535487..535773,535847..536023,536098..536206,536281..536615,536738..536905,537071..>537668))	Acanthamoeba castellanii str. Neff	14913904
ACA1_246110	mRNA	ACA1_246110	NW_004457323.1	538208	539023	D	ACA1_246110	join(<538208..538549,538580..>539023)	Acanthamoeba castellanii str. Neff	14913905
ACA1_246120	mRNA	ACA1_246120	NW_004457323.1	538576	538776	R	ACA1_246120	complement(<538576..>538776)	Acanthamoeba castellanii str. Neff	14913906
ACA1_246130	mRNA	ACA1_246130	NW_004457323.1	539179	541085	R	ACA1_246130	complement(join(<539179..539262,539337..539434,539517..539628,539749..539903,540027..540103,540201..540270,540442..540520,540712..540849,540972..>541085))	Acanthamoeba castellanii str. Neff	14913829
ACA1_246140	mRNA	ACA1_246140	NW_004457323.1	541701	542506	R	ACA1_246140	complement(join(<541701..542079,542169..>542506))	Acanthamoeba castellanii str. Neff	14913830
ACA1_246150	mRNA	ACA1_246150	NW_004457323.1	543110	548724	R	ACA1_246150	complement(join(<543110..543327,543420..543593,543701..543800,543914..544066,544151..544314,544396..544597,544711..544898,545017..545095,545229..545441,545586..545843,545939..546047,546375..546468,546560..546632,546704..546760,547031..547288,547358..547484,547694..547787,547879..547951,548023..>548724))	Acanthamoeba castellanii str. Neff	14913831
ACA1_246260	mRNA	ACA1_246260	NW_004457323.1	549989	550585	D	ACA1_246260	join(<549989..550001,550113..550340,550436..550529,550576..>550585)	Acanthamoeba castellanii str. Neff	14913832
ACA1_246370	mRNA	ACA1_246370	NW_004457323.1	551139	551789	R	ACA1_246370	complement(join(<551139..551144,551209..551263,551333..551430,551541..>551789))	Acanthamoeba castellanii str. Neff	14913833
ACA1_246380	mRNA	ACA1_246380	NW_004457323.1	551881	552615	R	ACA1_246380	complement(join(<551881..551967,552049..552119,552444..>552615))	Acanthamoeba castellanii str. Neff	14913834
ACA1_246490	mRNA	ACA1_246490	NW_004457323.1	552685	556636	R	ACA1_246490	complement(join(<552685..552771,552853..552923,553041..553240,553325..553397,553671..553794,553891..554030,554125..554231,554298..554412,554513..554774,554841..555005,555104..555232,555352..555485,555640..555785,555958..556094,556192..556328,556432..556549,556622..>556636))	Acanthamoeba castellanii str. Neff	14913835
ACA1_246500	mRNA	ACA1_246500	NW_004457323.1	557065	561660	R	ACA1_246500	complement(join(<557065..557308,557573..561311,561615..>561660))	Acanthamoeba castellanii str. Neff	14913836
ACA1_246510	mRNA	ACA1_246510	NW_004457323.1	562387	566065	D	ACA1_246510	join(<562387..563559,563690..563756,563858..563928,564013..564110,564182..564239,564315..564427,564508..564565,564638..564754,564869..565003,565115..565179,565268..565324,565390..565496,565749..>566065)	Acanthamoeba castellanii str. Neff	14913837
ACA1_246520	mRNA	ACA1_246520	NW_004457323.1	566353	569573	D	ACA1_246520	join(<566353..566554,566610..566680,566795..566938,567067..567110,567184..567230,567313..567380,567437..567505,567619..567659,567719..568110,568206..568274,568361..568535,568601..>569573)	Acanthamoeba castellanii str. Neff	14913838
ACA1_246530	mRNA	ACA1_246530	NW_004457323.1	569834	570525	D	ACA1_246530	join(<569834..569947,570068..570306,570414..>570525)	Acanthamoeba castellanii str. Neff	14913820
ACA1_246540	mRNA	ACA1_246540	NW_004457323.1	570621	574224	D	ACA1_246540	join(<570621..570762,570865..570990,571069..571319,571494..571843,571926..572006,572081..572232,572330..572397,572463..572546,572633..572690,572782..572870,572946..573022,573108..573263,573364..573485,573573..573667,573837..573890,573973..>574224)	Acanthamoeba castellanii str. Neff	14913821
ACA1_246650	mRNA	ACA1_246650	NW_004457323.1	574572	576368	R	ACA1_246650	complement(join(<574572..574860,574957..575051,575157..575261,575365..575496,575663..575736,575827..575933,576017..576089,576305..>576368))	Acanthamoeba castellanii str. Neff	14913822
ACA1_246760	mRNA	ACA1_246760	NW_004457323.1	576597	577892	D	ACA1_246760	join(<576597..576647,576669..576753,576841..576935,577017..>577892)	Acanthamoeba castellanii str. Neff	14913823
ACA1_246770	mRNA	ACA1_246770	NW_004457323.1	578179	579888	D	ACA1_246770	join(<578179..578361,578451..578592,578671..578850,578989..579107,579230..579340,579414..579475,579594..>579888)	Acanthamoeba castellanii str. Neff	14913824
ACA1_246780	mRNA	ACA1_246780	NW_004457323.1	580015	580995	R	ACA1_246780	complement(join(<580015..580226,580316..580437,580489..580522,580610..580698,580796..580874,580956..>580995))	Acanthamoeba castellanii str. Neff	14913825
ACA1_246790	mRNA	ACA1_246790	NW_004457323.1	581302	581701	D	ACA1_246790	join(<581302..581367,581450..>581701)	Acanthamoeba castellanii str. Neff	14913826
ACA1_246800	mRNA	ACA1_246800	NW_004457323.1	582331	585855	R	ACA1_246800	complement(join(<582331..582356,582405..582420,582640..582744,582856..582987,583005..583097,583238..583341,583473..583593,583840..584112,584130..584939,585014..585176,585262..585310,585359..585449,585544..585645,585721..>585855))	Acanthamoeba castellanii str. Neff	14913827
ACA1_246810	mRNA	ACA1_246810	NW_004457323.1	586077	587739	R	ACA1_246810	complement(join(<586077..586225,586328..586434,586518..586590,586704..586826,586961..587009,587091..587212,587334..>587739))	Acanthamoeba castellanii str. Neff	14913828
ACA1_246820	mRNA	ACA1_246820	NW_004457323.1	588228	593914	D	ACA1_246820	join(<588228..588237,588409..588686,588804..588867,588979..589715,589905..590067,590185..590282,590381..590534,590607..590706,590815..590937,591134..591242,591343..591444,591551..591637,591689..591851,591998..592143,592229..592945,593069..593296,593374..593436,593530..593671,593760..>593914)	Acanthamoeba castellanii str. Neff	14914047
ACA1_246830	mRNA	ACA1_246830	NW_004457323.1	593978	597545	R	ACA1_246830	complement(join(<593978..594199,594251..594649,594723..595407,595508..595616,595726..596572,596653..596759,596826..597002,597132..597252,597318..597383,597468..>597545))	Acanthamoeba castellanii str. Neff	14914048
ACA1_246840	mRNA	ACA1_246840	NW_004457323.1	597787	598850	R	ACA1_246840	complement(join(<597787..598725,598827..>598850))	Acanthamoeba castellanii str. Neff	14914049
ACA1_246850	mRNA	ACA1_246850	NW_004457323.1	599106	601262	R	ACA1_246850	complement(join(<599106..599528,599618..599743,599833..599958,599999..600094,600170..600394,600484..600569,600663..600799,600888..600969,601148..>601262))	Acanthamoeba castellanii str. Neff	14914050
ACA1_246860	mRNA	ACA1_246860	NW_004457323.1	601379	602329	R	ACA1_246860	complement(join(<601379..601533,601614..601719,601801..601958,602083..>602329))	Acanthamoeba castellanii str. Neff	14914051
ACA1_247070	mRNA	ACA1_247070	NW_004457323.1	614741	615249	D	ACA1_247070	join(<614741..614953,615051..615116,615190..>615249)	Acanthamoeba castellanii str. Neff	14914052
ACA1_247080	mRNA	ACA1_247080	NW_004457323.1	615433	616415	D	ACA1_247080	join(<615433..615468,615546..615594,615671..615750,615830..616052,616090..>616415)	Acanthamoeba castellanii str. Neff	14914053
ACA1_247090	mRNA	ACA1_247090	NW_004457323.1	616504	617327	R	ACA1_247090	complement(join(<616504..617020,617098..>617327))	Acanthamoeba castellanii str. Neff	14914054
ACA1_247100	mRNA	ACA1_247100	NW_004457323.1	617640	617945	D	ACA1_247100	<617640..>617945	Acanthamoeba castellanii str. Neff	14914055
ACA1_247110	mRNA	ACA1_247110	NW_004457323.1	618050	625058	D	ACA1_247110	join(<618050..618098,618343..618488,618562..618626,618734..618864,618989..619104,619194..619331,619431..619614,619689..619789,619917..620095,620169..620193,620398..620474,620588..621071,621158..621996,622096..622170,622234..622316,622402..622594,622713..623060,623182..623378,623446..623692,623818..624003,624075..624135,624232..624283,624352..624466,624545..624674,624765..624844,624956..>625058)	Acanthamoeba castellanii str. Neff	14913972
ACA1_247120	mRNA	ACA1_247120	NW_004457323.1	625189	627054	R	ACA1_247120	complement(join(<625189..625356,625480..625608,625802..626049,626139..626227,626291..626939,627009..>627054))	Acanthamoeba castellanii str. Neff	14913973
ACA1_247140	mRNA	ACA1_247140	NW_004457323.1	628974	630649	D	ACA1_247140	join(<628974..629097,629193..629314,629397..629505,629574..629653,629722..629858,630021..630109,630176..630225,630316..630385,630456..>630649)	Acanthamoeba castellanii str. Neff	14913975
ACA1_247150	mRNA	ACA1_247150	NW_004457323.1	630727	632391	D	ACA1_247150	join(<630727..631359,631444..631569,631642..631749,631818..631937,632107..>632391)	Acanthamoeba castellanii str. Neff	14913976
ACA1_247160	mRNA	ACA1_247160	NW_004457323.1	632624	635526	D	ACA1_247160	join(<632624..632715,632795..632895,632990..633420,633500..633689,633764..633988,634066..634150,634270..634828,634927..635035,635105..635125,635218..635339,635434..>635526)	Acanthamoeba castellanii str. Neff	14913977
ACA1_247170	mRNA	ACA1_247170	NW_004457323.1	635591	636566	D	ACA1_247170	join(<635591..635681,635785..635941,636013..636093,636208..636300,636395..>636566)	Acanthamoeba castellanii str. Neff	14913978
ACA1_247180	mRNA	ACA1_247180	NW_004457323.1	638390	638773	R	ACA1_247180	complement(<638390..>638773)	Acanthamoeba castellanii str. Neff	14913979
ACA1_247190	mRNA	ACA1_247190	NW_004457323.1	638933	639427	R	ACA1_247190	complement(join(<638933..638978,639068..639111,639194..>639427))	Acanthamoeba castellanii str. Neff	14913980
ACA1_247200	mRNA	ACA1_247200	NW_004457323.1	640509	642671	R	ACA1_247200	complement(join(<640509..640768,640904..641438,641510..641679,641835..641964,642038..642255,642313..642358,642483..642557,642603..>642671))	Acanthamoeba castellanii str. Neff	14913981
ACA1_247210	mRNA	ACA1_247210	NW_004457323.1	646750	649014	D	ACA1_247210	join(<646750..646949,647155..647260,647416..647547,647695..647823,647862..648209,648267..648554,648616..>649014)	Acanthamoeba castellanii str. Neff	14913982
ACA1_247220	mRNA	ACA1_247220	NW_004457323.1	649391	650135	R	ACA1_247220	complement(join(<649391..649828,649905..>650135))	Acanthamoeba castellanii str. Neff	14913983
ACA1_247230	mRNA	ACA1_247230	NW_004457323.1	650245	652008	D	ACA1_247230	join(<650245..651836,651918..>652008)	Acanthamoeba castellanii str. Neff	14913984
ACA1_247240	mRNA	ACA1_247240	NW_004457323.1	652204	654427	R	ACA1_247240	complement(join(<652204..652434,652512..653612,653708..653929,654040..654155,654265..>654427))	Acanthamoeba castellanii str. Neff	14913985
ACA1_247250	mRNA	ACA1_247250	NW_004457323.1	654830	657472	R	ACA1_247250	complement(join(<654830..655678,655747..656124,656213..656489,656603..656937,657026..657130,657314..>657472))	Acanthamoeba castellanii str. Neff	14913986
ACA1_247260	mRNA	ACA1_247260	NW_004457323.1	657840	660576	D	ACA1_247260	join(<657840..657894,658014..658127,658343..658515,658628..658790,658881..659026,659128..659295,659385..659459,659540..659706,659789..659906,659982..660149,660217..>660576)	Acanthamoeba castellanii str. Neff	14913987
ACA1_247490	mRNA	ACA1_247490	NW_004457323.1	668287	668909	D	ACA1_247490	join(<668287..668581,668687..668788,668902..>668909)	Acanthamoeba castellanii str. Neff	14913990
ACA1_247500	mRNA	ACA1_247500	NW_004457323.1	669104	670886	D	ACA1_247500	join(<669104..669126,669191..669279,669348..669484,669554..669657,669730..669880,669948..670025,670094..670172,670247..670423,670491..670658,670744..>670886)	Acanthamoeba castellanii str. Neff	14913991
ACA1_247510	mRNA	ACA1_247510	NW_004457323.1	672930	675049	R	ACA1_247510	complement(join(<672930..673293,673361..673455,673542..673696,674026..674229,674590..>675049))	Acanthamoeba castellanii str. Neff	14913992
ACA1_247520	mRNA	ACA1_247520	NW_004457323.1	678503	683064	R	ACA1_247520	complement(join(<678503..679102,679245..679349,679411..680619,680662..>683064))	Acanthamoeba castellanii str. Neff	14913993
ACA1_247530	mRNA	ACA1_247530	NW_004457323.1	683607	684632	R	ACA1_247530	complement(<683607..>684632)	Acanthamoeba castellanii str. Neff	14913871
ACA1_247550	mRNA	ACA1_247550	NW_004457323.1	686315	688680	R	ACA1_247550	complement(join(<686315..686814,686920..687212,687354..687506,687628..687662,687829..687922,688032..688099,688170..688225,688320..>688680))	Acanthamoeba castellanii str. Neff	14913873
ACA1_247560	mRNA	ACA1_247560	NW_004457323.1	689333	690294	R	ACA1_247560	complement(join(<689333..689540,689606..689810,689868..690152,690213..>690294))	Acanthamoeba castellanii str. Neff	14913874
ACA1_247570	mRNA	ACA1_247570	NW_004457323.1	690529	690826	R	ACA1_247570	complement(join(<690529..690572,690595..>690826))	Acanthamoeba castellanii str. Neff	14913875
ACA1_247580	mRNA	ACA1_247580	NW_004457323.1	691290	691981	R	ACA1_247580	complement(join(<691290..691459,691551..691649,691745..691809,691911..>691981))	Acanthamoeba castellanii str. Neff	14913876
ACA1_247590	mRNA	ACA1_247590	NW_004457323.1	692053	694064	R	ACA1_247590	complement(join(<692053..692260,692333..692442,692545..692777,692837..693359,693463..693609,693721..693869,693983..>694064))	Acanthamoeba castellanii str. Neff	14913877
ACA1_247600	mRNA	ACA1_247600	NW_004457323.1	694930	695872	D	ACA1_247600	join(<694930..695009,695107..695197,695465..695581,695714..>695872)	Acanthamoeba castellanii str. Neff	14913878
ACA1_247610	mRNA	ACA1_247610	NW_004457323.1	695909	698456	D	ACA1_247610	join(<695909..695974,696081..696140,696247..696336,696456..696584,696738..696828,696923..697008,697080..697152,697217..697903,697980..698083,698203..698239,698374..>698456)	Acanthamoeba castellanii str. Neff	14913879
ACA1_247620	mRNA	ACA1_247620	NW_004457323.1	699087	700973	D	ACA1_247620	<699087..>700973	Acanthamoeba castellanii str. Neff	14913880
ACA1_247640	mRNA	ACA1_247640	NW_004457323.1	702128	702601	R	ACA1_247640	complement(<702128..>702601)	Acanthamoeba castellanii str. Neff	14913882
ACA1_247650	mRNA	ACA1_247650	NW_004457323.1	702698	703844	D	ACA1_247650	join(<702698..702907,703042..703236,703359..703679,703728..>703844)	Acanthamoeba castellanii str. Neff	14913883
ACA1_247660	mRNA	ACA1_247660	NW_004457323.1	704825	707163	D	ACA1_247660	join(<704825..705517,705532..>707163)	Acanthamoeba castellanii str. Neff	14913952
ACA1_247670	mRNA	ACA1_247670	NW_004457323.1	707640	708104	D	ACA1_247670	join(<707640..707829,707857..>708104)	Acanthamoeba castellanii str. Neff	14913953
ACA1_247680	mRNA	ACA1_247680	NW_004457323.1	709833	710585	R	ACA1_247680	complement(join(<709833..710007,710044..>710585))	Acanthamoeba castellanii str. Neff	14913954
ACA1_247690	mRNA	ACA1_247690	NW_004457323.1	710756	712007	R	ACA1_247690	complement(join(<710756..711857,711886..>712007))	Acanthamoeba castellanii str. Neff	14913955
ACA1_247700	mRNA	ACA1_247700	NW_004457323.1	712268	712537	R	ACA1_247700	complement(<712268..>712537)	Acanthamoeba castellanii str. Neff	14913956
ACA1_247710	mRNA	ACA1_247710	NW_004457323.1	712789	714555	R	ACA1_247710	complement(join(<712789..713031,713049..713246,713341..713418,713659..713990,714042..>714555))	Acanthamoeba castellanii str. Neff	14913957
ACA1_247720	mRNA	ACA1_247720	NW_004457323.1	717071	717460	R	ACA1_247720	complement(join(<717071..717262,717434..>717460))	Acanthamoeba castellanii str. Neff	14913958
ACA1_247730	mRNA	ACA1_247730	NW_004457323.1	719267	723097	D	ACA1_247730	join(<719267..719720,720159..720305,720692..720975,721031..721125,721192..721262,721413..721724,722008..722165,722288..>723097)	Acanthamoeba castellanii str. Neff	14913959
ACA1_247740	mRNA	ACA1_247740	NW_004457323.1	727042	728768	D	ACA1_247740	join(<727042..727050,727222..727500,728025..728286,728522..728575,728587..>728768)	Acanthamoeba castellanii str. Neff	14913960
ACA1_347660	mRNA	ACA1_347660	NW_004457322.1	5879	7137	D	ACA1_347660	join(<5879..6110,6180..6260,6318..6347,6518..6717,6928..>7137)	Acanthamoeba castellanii str. Neff	14913815
ACA1_347670	mRNA	ACA1_347670	NW_004457322.1	7212	8976	R	ACA1_347670	complement(join(<7212..7362,7443..7685,7934..8030,8117..8261,8402..8529,8659..8714,8801..>8976))	Acanthamoeba castellanii str. Neff	14913813
ACA1_347680	mRNA	ACA1_347680	NW_004457322.1	9103	10616	D	ACA1_347680	join(<9103..9132,9240..9323,9349..9463,9586..9950,10052..10195,10276..10346,10523..>10616)	Acanthamoeba castellanii str. Neff	14913814
ACA1_347790	mRNA	ACA1_347790	NW_004457322.1	14299	14854	D	ACA1_347790	join(<14299..14362,14531..14623,14751..>14854)	Acanthamoeba castellanii str. Neff	14913816
ACA1_347800	mRNA	ACA1_347800	NW_004457322.1	15768	16127	R	ACA1_347800	complement(join(<15768..15776,15832..15974,16061..>16127))	Acanthamoeba castellanii str. Neff	14913817
ACA1_347910	mRNA	ACA1_347910	NW_004457322.1	20571	22189	R	ACA1_347910	complement(join(<20571..20708,20797..20882,21005..21142,21281..21391,21549..21659,21779..21891,21993..>22189))	Acanthamoeba castellanii str. Neff	14913818
ACA1_347920	mRNA	ACA1_347920	NW_004457322.1	22274	22967	R	ACA1_347920	complement(join(<22274..22292,22436..22679,22784..>22967))	Acanthamoeba castellanii str. Neff	14913819
ACA1_146860	mRNA	ACA1_146860	NW_004457321.1	128	9703	R	ACA1_146860	complement(join(<128..186,258..510,610..777,2008..2236,2311..2498,2624..2841,2923..3094,3183..3311,3383..3493,3579..3660,3781..3941,4384..4433,4555..4732,4862..4998,5103..5271,5374..5505,5599..5769,5839..6518,6711..6784,6881..7034,7123..7333,7452..7591,7713..7764,7859..7988,8120..8321,8416..8545,8650..8748,8839..8990,9109..9157,9316..9436,9567..>9703))	Acanthamoeba castellanii str. Neff	14913812
ACA1_147270	mRNA	ACA1_147270	NW_004457321.1	14821	16951	D	ACA1_147270	join(<14821..14830,14932..15973,16366..>16951)	Acanthamoeba castellanii str. Neff	14913802
ACA1_147380	mRNA	ACA1_147380	NW_004457321.1	17041	23531	R	ACA1_147380	complement(join(<17041..17859,17963..18081,18178..18291,18369..18458,18528..18638,18742..18805,18892..19036,19130..19316,19404..19510,19605..19817,19924..20049,20149..20251,20353..20479,20578..20678,20763..21024,21285..21379,21455..21496,21561..21636,21713..21815,21899..22047,22124..22197,22292..22485,22568..22661,22721..22847,23059..23120,23210..23277,23344..>23531))	Acanthamoeba castellanii str. Neff	14913799
ACA1_147390	mRNA	ACA1_147390	NW_004457321.1	23792	25137	R	ACA1_147390	complement(join(<23792..23948,24018..24170,24304..24382,24471..24568,24648..24814,24896..24949,25039..>25137))	Acanthamoeba castellanii str. Neff	14913800
ACA1_147400	mRNA	ACA1_147400	NW_004457321.1	25273	26648	D	ACA1_147400	join(<25273..25305,25453..25698,25770..25831,25929..26065,26146..26207,26287..26483,26576..>26648)	Acanthamoeba castellanii str. Neff	14913801
ACA1_147410	mRNA	ACA1_147410	NW_004457321.1	26760	27560	R	ACA1_147410	complement(join(<26760..27104,27183..27238,27374..>27560))	Acanthamoeba castellanii str. Neff	14913803
ACA1_147520	mRNA	ACA1_147520	NW_004457321.1	28802	31190	D	ACA1_147520	join(<28802..28828,28915..29030,29118..29201,29293..29360,29461..29562,29654..29694,29778..29857,29966..30045,30130..30257,30342..30453,30703..30769,30882..31004,31103..>31190)	Acanthamoeba castellanii str. Neff	14913804
ACA1_147530	mRNA	ACA1_147530	NW_004457321.1	31236	33418	R	ACA1_147530	complement(join(<31236..31581,31687..31820,31895..31981,32082..32186,32324..32435,32561..32627,32747..32846,32912..32996,33129..>33418))	Acanthamoeba castellanii str. Neff	14913805
ACA1_147540	mRNA	ACA1_147540	NW_004457321.1	33951	34896	D	ACA1_147540	join(<33951..34257,34319..>34896)	Acanthamoeba castellanii str. Neff	14913806
ACA1_147550	mRNA	ACA1_147550	NW_004457321.1	35005	38036	R	ACA1_147550	complement(join(<35005..35683,35788..36457,36555..36773,36842..36928,37353..37493,37645..37733,37963..>38036))	Acanthamoeba castellanii str. Neff	14913793
ACA1_147560	mRNA	ACA1_147560	NW_004457321.1	38206	40396	D	ACA1_147560	join(<38206..39337,39444..39565,39671..>40396)	Acanthamoeba castellanii str. Neff	14913794
ACA1_147570	mRNA	ACA1_147570	NW_004457321.1	40819	41532	D	ACA1_147570	join(<40819..40827,40966..41037,41139..41489,41509..>41532)	Acanthamoeba castellanii str. Neff	14913795
ACA1_147680	mRNA	ACA1_147680	NW_004457321.1	42647	45856	D	ACA1_147680	join(<42647..42671,42778..42818,42936..43007,43078..43905,43926..44010,44066..44197,44208..44392,44477..44984,45064..45198,45280..45359,45395..45411,45523..45614,45735..>45856)	Acanthamoeba castellanii str. Neff	14913796
ACA1_147690	mRNA	ACA1_147690	NW_004457321.1	46253	48372	R	ACA1_147690	complement(join(<46253..46543,46641..46986,47082..47331,47427..47917,48101..>48372))	Acanthamoeba castellanii str. Neff	14913797
ACA1_147700	mRNA	ACA1_147700	NW_004457321.1	49109	49492	R	ACA1_147700	complement(<49109..>49492)	Acanthamoeba castellanii str. Neff	14913798
ACA1_147710	mRNA	ACA1_147710	NW_004457321.1	50335	55067	D	ACA1_147710	join(<50335..50417,50561..50789,50893..51070,51134..51272,51373..51487,51575..51653,51751..51902,51976..52049,52194..52328,52427..52459,52542..52594,52659..52920,53076..53203,53301..53494,53616..53967,54044..54139,54298..54370,54477..54600,54771..54941,55038..>55067)	Acanthamoeba castellanii str. Neff	14913784
ACA1_147720	mRNA	ACA1_147720	NW_004457321.1	55453	56004	D	ACA1_147720	join(<55453..55568,55698..>56004)	Acanthamoeba castellanii str. Neff	14913785
ACA1_147730	mRNA	ACA1_147730	NW_004457321.1	56659	57052	D	ACA1_147730	join(<56659..56784,56876..>57052)	Acanthamoeba castellanii str. Neff	14913786
ACA1_147740	mRNA	ACA1_147740	NW_004457321.1	57329	59040	R	ACA1_147740	complement(join(<57329..57489,57609..57705,57789..57953,58051..58196,58284..58427,58528..58751,58834..58892,58975..>59040))	Acanthamoeba castellanii str. Neff	14913787
ACA1_147750	mRNA	ACA1_147750	NW_004457321.1	59379	66771	R	ACA1_147750	complement(join(<59379..59510,59642..59780,59866..60078,60152..60210,60302..60408,60486..60550,60666..60844,60985..61098,61212..62119,62200..62404,62489..62769,62829..63114,63203..63247,63333..63476,63559..63728,63837..63900,63975..64125,64187..64350,64430..64447,64505..64650,64755..65208,65282..65539,65650..65805,66154..66340,66722..>66771))	Acanthamoeba castellanii str. Neff	14913788
ACA1_147760	mRNA	ACA1_147760	NW_004457321.1	67195	67901	R	ACA1_147760	complement(join(<67195..67240,67312..>67901))	Acanthamoeba castellanii str. Neff	14913789
ACA1_147770	mRNA	ACA1_147770	NW_004457321.1	68964	70066	D	ACA1_147770	join(<68964..69257,69290..69330,69351..69432,69914..>70066)	Acanthamoeba castellanii str. Neff	14913790
ACA1_147880	mRNA	ACA1_147880	NW_004457321.1	70162	71766	R	ACA1_147880	complement(join(<70162..70294,70398..70783,70874..71002,71109..71211,71291..71365,71455..71540,71743..>71766))	Acanthamoeba castellanii str. Neff	14913791
ACA1_147990	mRNA	ACA1_147990	NW_004457321.1	71767	73582	D	ACA1_147990	join(<71767..71825,71893..71941,72044..72137,72475..72560,72680..72775,72876..72952,73252..>73582)	Acanthamoeba castellanii str. Neff	14913792
ACA1_148000	mRNA	ACA1_148000	NW_004457321.1	74616	76155	D	ACA1_148000	join(<74616..74761,74872..74912,74972..75056,75151..75207,75275..75372,75472..75603,75694..75757,75796..75846,75962..76077,76103..>76155)	Acanthamoeba castellanii str. Neff	14913807
ACA1_148010	mRNA	ACA1_148010	NW_004457321.1	77839	78966	D	ACA1_148010	join(<77839..77859,77951..78058,78232..78347,78441..78663,78742..>78966)	Acanthamoeba castellanii str. Neff	14913808
ACA1_148020	mRNA	ACA1_148020	NW_004457321.1	79143	82631	R	ACA1_148020	complement(join(<79143..79410,79495..79640,79751..79894,79974..80250,80324..80482,80558..81016,81075..81208,81283..81381,81423..81494,81751..82007,82080..82203,82422..>82631))	Acanthamoeba castellanii str. Neff	14913809
ACA1_148130	mRNA	ACA1_148130	NW_004457321.1	83860	84882	D	ACA1_148130	join(<83860..84014,84092..84212,84334..84494,84606..>84882)	Acanthamoeba castellanii str. Neff	14913810
ACA1_148240	mRNA	ACA1_148240	NW_004457321.1	91361	93587	D	ACA1_148240	join(<91361..91411,91523..91618,91728..91845,91941..92138,92263..92520,92640..92777,92872..93417,93496..>93587)	Acanthamoeba castellanii str. Neff	14913811
ACA1_339690	mRNA	ACA1_339690	NW_004457320.1	6199	6669	R	ACA1_339690	complement(<6199..>6669)	Acanthamoeba castellanii str. Neff	14913772
ACA1_339700	mRNA	ACA1_339700	NW_004457320.1	8347	10536	D	ACA1_339700	join(<8347..8373,8490..8651,8690..8974,9077..9229,9324..9523,9566..9930,10004..10172,10515..>10536)	Acanthamoeba castellanii str. Neff	14913768
ACA1_339710	mRNA	ACA1_339710	NW_004457320.1	12071	12366	D	ACA1_339710	join(<12071..12136,12214..>12366)	Acanthamoeba castellanii str. Neff	14913781
ACA1_339720	mRNA	ACA1_339720	NW_004457320.1	12381	12985	D	ACA1_339720	join(<12381..12515,12620..12704,12792..>12985)	Acanthamoeba castellanii str. Neff	14913782
ACA1_339730	mRNA	ACA1_339730	NW_004457320.1	13210	14551	D	ACA1_339730	join(<13210..13393,13485..13606,13693..13926,14047..14232,14259..14310,14418..>14551)	Acanthamoeba castellanii str. Neff	14913783
ACA1_339740	mRNA	ACA1_339740	NW_004457320.1	14706	18528	D	ACA1_339740	join(<14706..15275,15389..15747,15839..15983,16086..16254,16333..16546,16618..16680,16763..17043,17184..17500,17591..17759,17837..18142,18236..>18528)	Acanthamoeba castellanii str. Neff	14913769
ACA1_339750	mRNA	ACA1_339750	NW_004457320.1	19132	19911	R	ACA1_339750	complement(join(<19132..19189,19271..>19911))	Acanthamoeba castellanii str. Neff	14913770
ACA1_339760	mRNA	ACA1_339760	NW_004457320.1	20021	21702	R	ACA1_339760	complement(join(<20021..20239,20334..20437,20504..20579,20674..20737,20843..20971,21103..21242,21378..21468,21572..>21702))	Acanthamoeba castellanii str. Neff	14913771
ACA1_339770	mRNA	ACA1_339770	NW_004457320.1	21897	24164	D	ACA1_339770	join(<21897..22144,22240..22366,22454..22596,22708..22973,23126..23299,23370..23440,23682..>24164)	Acanthamoeba castellanii str. Neff	14913773
ACA1_339880	mRNA	ACA1_339880	NW_004457320.1	24281	29420	R	ACA1_339880	complement(join(<24281..24464,24552..24718,24793..24931,25010..25116,25235..25565,25648..25683,25771..25955,26155..26206,26292..26396,26485..26579,26670..26804,26880..27231,27306..27412,27511..27769,27868..28013,28141..28362,28431..28600,28665..28846,28909..29040,29118..29253,29333..>29420))	Acanthamoeba castellanii str. Neff	14913774
ACA1_339890	mRNA	ACA1_339890	NW_004457320.1	29821	30639	R	ACA1_339890	complement(join(<29821..29978,30068..30481,30576..>30639))	Acanthamoeba castellanii str. Neff	14913775
ACA1_339900	mRNA	ACA1_339900	NW_004457320.1	30923	31524	R	ACA1_339900	complement(join(<30923..31252,31405..>31524))	Acanthamoeba castellanii str. Neff	14913776
ACA1_339910	mRNA	ACA1_339910	NW_004457320.1	31927	32988	R	ACA1_339910	complement(join(<31927..32479,32586..32835,32940..>32988))	Acanthamoeba castellanii str. Neff	14913777
ACA1_339920	mRNA	ACA1_339920	NW_004457320.1	33260	36557	D	ACA1_339920	join(<33260..33439,33520..33615,33689..33765,33837..33950,34036..34304,34380..34638,34724..35200,35267..>36557)	Acanthamoeba castellanii str. Neff	14913778
ACA1_339930	mRNA	ACA1_339930	NW_004457320.1	36900	40208	D	ACA1_339930	join(<36900..37064,37199..37294,37365..37431,37558..37669,37749..37787,37871..37941,38041..38485,38574..39919,40066..>40208)	Acanthamoeba castellanii str. Neff	14913779
ACA1_339940	mRNA	ACA1_339940	NW_004457320.1	41380	44633	R	ACA1_339940	complement(join(<41380..41752,41832..42145,42238..42470,42546..42668,42784..43198,43258..43383,43480..43560,43644..43733,43838..44006,44089..44455,44549..>44633))	Acanthamoeba castellanii str. Neff	14913780
ACA1_099940	mRNA	ACA1_099940	NW_004457319.1	4193	5077	D	ACA1_099940	join(<4193..4292,4426..4533,4665..4774,4850..4922,4989..>5077)	Acanthamoeba castellanii str. Neff	14913724
ACA1_099950	mRNA	ACA1_099950	NW_004457319.1	5135	6822	R	ACA1_099950	complement(join(<5135..5299,5398..5512,5601..5683,5817..5913,5996..6396,6493..>6822))	Acanthamoeba castellanii str. Neff	14913756
ACA1_099960	mRNA	ACA1_099960	NW_004457319.1	8009	9320	D	ACA1_099960	join(<8009..8232,8329..8474,8591..8945,9047..>9320)	Acanthamoeba castellanii str. Neff	14913761
ACA1_099970	mRNA	ACA1_099970	NW_004457319.1	9388	11926	R	ACA1_099970	complement(join(<9388..9634,9759..9858,9954..10032,10122..10250,10347..10508,10600..10808,10871..10966,11083..11165,11292..11464,11586..11699,11783..>11926))	Acanthamoeba castellanii str. Neff	14913762
ACA1_099980	mRNA	ACA1_099980	NW_004457319.1	12129	13246	D	ACA1_099980	join(<12129..12437,12542..>13246)	Acanthamoeba castellanii str. Neff	14913752
ACA1_099990	mRNA	ACA1_099990	NW_004457319.1	13412	13630	D	ACA1_099990	<13412..>13630	Acanthamoeba castellanii str. Neff	14913753
ACA1_100000	mRNA	ACA1_100000	NW_004457319.1	13888	16555	R	ACA1_100000	complement(join(<13888..14033,14128..14331,14413..14539,14625..14840,14915..15411,15481..15626,15710..16202,16279..>16555))	Acanthamoeba castellanii str. Neff	14913754
ACA1_100010	mRNA	ACA1_100010	NW_004457319.1	17259	18828	R	ACA1_100010	complement(join(<17259..17366,17488..17553,17656..17741,17887..17935,18015..18115,18138..18225,18317..18349,18444..18472,18558..18620,18780..>18828))	Acanthamoeba castellanii str. Neff	14913755
ACA1_100020	mRNA	ACA1_100020	NW_004457319.1	19194	20420	D	ACA1_100020	join(<19194..19412,19488..19559,19733..19832,19989..20147,20311..>20420)	Acanthamoeba castellanii str. Neff	14913757
ACA1_100030	mRNA	ACA1_100030	NW_004457319.1	20680	23328	D	ACA1_100030	join(<20680..20896,21159..21564,21909..22147,22206..22283,22373..22438,22535..>23328)	Acanthamoeba castellanii str. Neff	14913758
ACA1_100040	mRNA	ACA1_100040	NW_004457319.1	23435	24499	D	ACA1_100040	join(<23435..23702,23795..23916,24012..24200,24437..>24499)	Acanthamoeba castellanii str. Neff	14913759
ACA1_100050	mRNA	ACA1_100050	NW_004457319.1	24547	25282	D	ACA1_100050	join(<24547..24617,24718..25014,25108..>25282)	Acanthamoeba castellanii str. Neff	14913760
ACA1_100060	mRNA	ACA1_100060	NW_004457319.1	25438	27545	R	ACA1_100060	complement(join(<25438..25544,25616..25804,25917..26018,26100..26226,26273..26399,26496..26611,26683..26772,26869..27129,27195..>27545))	Acanthamoeba castellanii str. Neff	14913763
ACA1_100070	mRNA	ACA1_100070	NW_004457319.1	27704	31208	R	ACA1_100070	complement(join(<27704..27879,27944..28091,28149..28334,28445..28916,29037..29151,29258..29403,29473..>31208))	Acanthamoeba castellanii str. Neff	14913764
ACA1_100080	mRNA	ACA1_100080	NW_004457319.1	31438	33282	R	ACA1_100080	complement(join(<31438..31531,31608..31708,31789..31943,32029..32208,32300..32361,32452..32543,32649..32762,32850..32941,33075..>33282))	Acanthamoeba castellanii str. Neff	14913765
ACA1_100090	mRNA	ACA1_100090	NW_004457319.1	33498	35790	R	ACA1_100090	complement(join(<33498..33545,33630..33749,33831..33953,34050..34224,34300..34354,34437..34485,34595..34675,34751..34860,34968..35038,35098..35188,35283..35380,35579..>35790))	Acanthamoeba castellanii str. Neff	14913766
ACA1_100100	mRNA	ACA1_100100	NW_004457319.1	36109	37814	D	ACA1_100100	join(<36109..36202,36279..36397,36494..36599,36690..36760,37153..37298,37371..37585,37654..>37814)	Acanthamoeba castellanii str. Neff	14913767
ACA1_100110	mRNA	ACA1_100110	NW_004457319.1	37866	39033	D	ACA1_100110	join(<37866..38446,38526..38658,38716..>39033)	Acanthamoeba castellanii str. Neff	14913733
ACA1_100120	mRNA	ACA1_100120	NW_004457319.1	39476	40898	D	ACA1_100120	join(<39476..39514,39612..39811,39882..39975,40066..40150,40221..40313,40378..40521,40587..40775,40834..>40898)	Acanthamoeba castellanii str. Neff	14913734
ACA1_100130	mRNA	ACA1_100130	NW_004457319.1	41315	44208	D	ACA1_100130	join(<41315..41657,41792..42150,42254..42310,42444..42508,42583..42652,42740..42803,42914..43017,43050..43127,43167..43194,43326..43568,43664..43989,44095..>44208)	Acanthamoeba castellanii str. Neff	14913735
ACA1_100140	mRNA	ACA1_100140	NW_004457319.1	44334	46397	R	ACA1_100140	complement(join(<44334..44345,44377..44472,44539..44652,44715..45086,45171..45346,45432..45600,45661..45788,45925..46181,46294..>46397))	Acanthamoeba castellanii str. Neff	14913736
ACA1_100150	mRNA	ACA1_100150	NW_004457319.1	46854	49043	D	ACA1_100150	join(<46854..47040,47154..47275,47374..47629,47718..47978,48040..48396,48469..48721,48839..>49043)	Acanthamoeba castellanii str. Neff	14913737
ACA1_100160	mRNA	ACA1_100160	NW_004457319.1	50361	52620	R	ACA1_100160	complement(join(<50361..50828,50940..51054,51144..51229,51319..51421,51512..52539,52550..52563,52611..>52620))	Acanthamoeba castellanii str. Neff	14913738
ACA1_100170	mRNA	ACA1_100170	NW_004457319.1	52835	54640	R	ACA1_100170	complement(join(<52835..53203,53384..53456,53586..53671,53741..53843,53937..54015,54077..54145,54226..>54640))	Acanthamoeba castellanii str. Neff	14913739
ACA1_100180	mRNA	ACA1_100180	NW_004457319.1	55717	55968	D	ACA1_100180	<55717..>55968	Acanthamoeba castellanii str. Neff	14913740
ACA1_100410	mRNA	ACA1_100410	NW_004457319.1	66539	72271	R	ACA1_100410	complement(join(<66539..66838,66977..68016,68050..68092,68168..68320,68425..69003,69098..70429,70504..70722,70810..71411,71502..71563,71655..71725,72015..72059,72096..72193,72241..>72271))	Acanthamoeba castellanii str. Neff	14913743
ACA1_100420	mRNA	ACA1_100420	NW_004457319.1	72518	74992	D	ACA1_100420	join(<72518..72740,72832..72936,73022..73082,73166..73302,73379..73525,73636..73911,73985..74067,74156..74383,74460..74544,74644..74720,74846..>74992)	Acanthamoeba castellanii str. Neff	14913744
ACA1_100430	mRNA	ACA1_100430	NW_004457319.1	76384	76958	R	ACA1_100430	complement(join(<76384..76509,76592..76754,76873..>76958))	Acanthamoeba castellanii str. Neff	14913745
ACA1_100440	mRNA	ACA1_100440	NW_004457319.1	77430	80197	R	ACA1_100440	complement(join(<77430..77556,77630..77728,77831..77937,78022..78115,78217..78305,78429..78508,78570..78644,78735..78851,78955..79110,79228..79345,79537..79697,79828..79984,80132..>80197))	Acanthamoeba castellanii str. Neff	14913746
ACA1_100450	mRNA	ACA1_100450	NW_004457319.1	80187	84592	D	ACA1_100450	join(<80187..80212,80901..80990,81060..81252,81346..81465,81680..81842,81932..82140,82225..82560,82627..82799,82924..83128,83218..83310,83384..83627,83734..84131,84242..>84592)	Acanthamoeba castellanii str. Neff	14913748
ACA1_100460	mRNA	ACA1_100460	NW_004457319.1	86103	91204	R	ACA1_100460	complement(join(<86103..86123,86334..86492,86660..86887,86979..87161,87197..87693,87788..87913,87955..88176,88234..88440,88507..88651,88817..88903,88996..89349,89426..89564,89652..89835,89911..90020,90100..90641,90744..90873,90960..91087,91157..>91204))	Acanthamoeba castellanii str. Neff	14913747
ACA1_100470	mRNA	ACA1_100470	NW_004457319.1	91215	92274	R	ACA1_100470	complement(join(<91215..91328,91603..91704,91774..91887,91950..92073,92159..>92274))	Acanthamoeba castellanii str. Neff	14913749
ACA1_100480	mRNA	ACA1_100480	NW_004457319.1	92895	94961	R	ACA1_100480	complement(join(<92895..93559,93630..93704,93779..94004,94269..94388,94467..94586,94660..94767,94866..>94961))	Acanthamoeba castellanii str. Neff	14913750
ACA1_100490	mRNA	ACA1_100490	NW_004457319.1	95053	97871	D	ACA1_100490	join(<95053..95610,95699..95771,95893..96007,96095..96156,96300..96477,96835..96983,97070..97219,97302..97678,97782..>97871)	Acanthamoeba castellanii str. Neff	14913751
ACA1_100500	mRNA	ACA1_100500	NW_004457319.1	97979	100079	R	ACA1_100500	complement(join(<97979..98187,98330..99050,99185..99305,99404..99544,99663..99861,99995..>100079))	Acanthamoeba castellanii str. Neff	14913714
ACA1_100510	mRNA	ACA1_100510	NW_004457319.1	100564	101705	D	ACA1_100510	join(<100564..100602,100677..100838,100917..100979,101063..101151,101234..101289,101376..101428,101493..>101705)	Acanthamoeba castellanii str. Neff	14913715
ACA1_100520	mRNA	ACA1_100520	NW_004457319.1	101800	102510	D	ACA1_100520	join(<101800..101911,102037..102267,102446..>102510)	Acanthamoeba castellanii str. Neff	14913716
ACA1_100530	mRNA	ACA1_100530	NW_004457319.1	102963	103490	D	ACA1_100530	<102963..>103490	Acanthamoeba castellanii str. Neff	14913717
ACA1_100540	mRNA	ACA1_100540	NW_004457319.1	103705	109351	R	ACA1_100540	complement(join(<103705..106080,106208..106453,106487..107717,107841..>109351))	Acanthamoeba castellanii str. Neff	14913718
ACA1_100550	mRNA	ACA1_100550	NW_004457319.1	110234	112182	D	ACA1_100550	join(<110234..110437,110518..>112182)	Acanthamoeba castellanii str. Neff	14913719
ACA1_100560	mRNA	ACA1_100560	NW_004457319.1	112718	114706	D	ACA1_100560	join(<112718..112928,113060..113230,113317..113781,113867..114016,114094..114265,114373..114503,114582..>114706)	Acanthamoeba castellanii str. Neff	14913720
ACA1_100570	mRNA	ACA1_100570	NW_004457319.1	114798	116202	R	ACA1_100570	complement(join(<114798..114999,115092..115170,115233..115530,115602..115772,115846..>116202))	Acanthamoeba castellanii str. Neff	14913721
ACA1_100580	mRNA	ACA1_100580	NW_004457319.1	119458	120063	R	ACA1_100580	complement(<119458..>120063)	Acanthamoeba castellanii str. Neff	14913722
ACA1_100590	mRNA	ACA1_100590	NW_004457319.1	120583	125800	D	ACA1_100590	join(<120583..121010,121114..123220,123306..123434,123515..>125800)	Acanthamoeba castellanii str. Neff	14913723
ACA1_100600	mRNA	ACA1_100600	NW_004457319.1	126065	127799	D	ACA1_100600	join(<126065..126083,126244..126366,126483..126611,126764..126904,127029..127174,127271..127384,127463..127558,127644..>127799)	Acanthamoeba castellanii str. Neff	14913725
ACA1_100610	mRNA	ACA1_100610	NW_004457319.1	129042	134365	R	ACA1_100610	complement(join(<129042..129276,129365..131436,131517..131645,131729..133838,133938..>134365))	Acanthamoeba castellanii str. Neff	14913726
ACA1_100620	mRNA	ACA1_100620	NW_004457319.1	134894	135499	D	ACA1_100620	<134894..>135499	Acanthamoeba castellanii str. Neff	14913727
ACA1_100630	mRNA	ACA1_100630	NW_004457319.1	136181	137016	D	ACA1_100630	join(<136181..136473,136567..136609,136654..136728,136879..>137016)	Acanthamoeba castellanii str. Neff	14913728
ACA1_100640	mRNA	ACA1_100640	NW_004457319.1	137192	138701	D	ACA1_100640	join(<137192..137361,137439..137573,137663..137745,137811..137910,138007..138017,138117..138198,138258..138382,138478..>138701)	Acanthamoeba castellanii str. Neff	14913729
ACA1_100650	mRNA	ACA1_100650	NW_004457319.1	138830	140209	D	ACA1_100650	<138830..>140209	Acanthamoeba castellanii str. Neff	14913730
ACA1_100660	mRNA	ACA1_100660	NW_004457319.1	140806	147335	D	ACA1_100660	join(<140806..140860,140965..141067,141122..141203,141296..141433,141500..141808,141900..142213,142294..142643,142713..142954,143061..143162,143256..143397,143481..143876,143940..144199,144267..144383,144459..144555,144656..145948,146016..146223,146301..146557,146645..146850,146937..>147335)	Acanthamoeba castellanii str. Neff	14913731
ACA1_100670	mRNA	ACA1_100670	NW_004457319.1	147713	148395	D	ACA1_100670	join(<147713..147761,147873..147979,148090..>148395)	Acanthamoeba castellanii str. Neff	14913732
ACA1_314850	mRNA	ACA1_314850	NW_004457318.1	10412	11359	R	ACA1_314850	complement(join(<10412..10525,10605..10687,10748..11189,11339..>11359))	Acanthamoeba castellanii str. Neff	14913713
ACA1_314860	mRNA	ACA1_314860	NW_004457318.1	11630	12162	R	ACA1_314860	complement(join(<11630..11980,12052..>12162))	Acanthamoeba castellanii str. Neff	14913712
ACA1_118490	mRNA	ACA1_118490	NW_004457317.1	93	1031	D	ACA1_118490	join(<93..241,333..417,498..546,660..747,849..975,1023..>1031)	Acanthamoeba castellanii str. Neff	14913711
ACA1_118600	mRNA	ACA1_118600	NW_004457317.1	7293	8923	D	ACA1_118600	join(<7293..7412,7728..7876,7968..8052,8134..8182,8282..8369,8481..8607,8680..8799,8876..>8923)	Acanthamoeba castellanii str. Neff	14913700
ACA1_118710	mRNA	ACA1_118710	NW_004457317.1	9013	10742	R	ACA1_118710	complement(join(<9013..9219,9292..9476,9570..9722,9811..9977,10193..10363,10432..>10742))	Acanthamoeba castellanii str. Neff	14913701
ACA1_118720	mRNA	ACA1_118720	NW_004457317.1	10925	12971	R	ACA1_118720	complement(join(<10925..11171,11310..11479,11574..11623,11651..11754,11828..11922,11988..12035,12094..12245,12380..12457,12551..>12971))	Acanthamoeba castellanii str. Neff	14913702
ACA1_118730	mRNA	ACA1_118730	NW_004457317.1	13180	14817	D	ACA1_118730	join(<13180..13407,13496..13769,13909..14456,14542..14697,14752..>14817)	Acanthamoeba castellanii str. Neff	14913703
ACA1_118740	mRNA	ACA1_118740	NW_004457317.1	14946	17315	R	ACA1_118740	complement(join(<14946..15132,15241..15387,15485..15621,15763..15826,15845..15913,16020..16118,16256..16397,16499..16669,16769..16805,16891..16977,17148..>17315))	Acanthamoeba castellanii str. Neff	14913706
ACA1_118750	mRNA	ACA1_118750	NW_004457317.1	17560	19216	R	ACA1_118750	complement(join(<17560..17646,17730..18436,18545..18638,18715..18859,18957..19017,19099..>19216))	Acanthamoeba castellanii str. Neff	14913707
ACA1_118760	mRNA	ACA1_118760	NW_004457317.1	19889	27961	D	ACA1_118760	join(<19889..20512,20728..22264,22367..22648,22746..23237,23308..23402,23503..23607,23709..24079,24208..24708,24802..25127,25231..25362,25449..25528,25637..25722,25803..25966,26035..26158,26246..26358,26463..26610,26743..>27961)	Acanthamoeba castellanii str. Neff	14913708
ACA1_118770	mRNA	ACA1_118770	NW_004457317.1	28168	29855	R	ACA1_118770	complement(join(<28168..28352,28564..28653,28727..28846,28992..29165,29260..29353,29434..29500,29587..>29855))	Acanthamoeba castellanii str. Neff	14913709
ACA1_118780	mRNA	ACA1_118780	NW_004457317.1	30863	32765	R	ACA1_118780	complement(join(<30863..31618,31690..32487,32546..32649,32720..>32765))	Acanthamoeba castellanii str. Neff	14913710
ACA1_118790	mRNA	ACA1_118790	NW_004457317.1	32844	33641	R	ACA1_118790	complement(join(<32844..33395,33486..>33641))	Acanthamoeba castellanii str. Neff	14913704
ACA1_118800	mRNA	ACA1_118800	NW_004457317.1	34490	34951	D	ACA1_118800	<34490..>34951	Acanthamoeba castellanii str. Neff	14913705
ACA1_349320	mRNA	ACA1_349320	NW_004457316.1	184	544	D	ACA1_349320	join(<184..374,448..>544)	Acanthamoeba castellanii str. Neff	14913676
ACA1_349340	mRNA	ACA1_349340	NW_004457316.1	2764	4949	R	ACA1_349340	complement(join(<2764..2900,2997..3120,3224..3352,3479..3692,3793..3883,3971..4057,4159..4582,4656..4778,4881..>4949))	Acanthamoeba castellanii str. Neff	14913691
ACA1_349450	mRNA	ACA1_349450	NW_004457316.1	7675	8125	R	ACA1_349450	complement(join(<7675..7935,8072..>8125))	Acanthamoeba castellanii str. Neff	14913692
ACA1_349460	mRNA	ACA1_349460	NW_004457316.1	8657	9514	R	ACA1_349460	complement(join(<8657..8701,8779..8903,8991..9083,9174..9207,9338..>9514))	Acanthamoeba castellanii str. Neff	14913693
ACA1_349470	mRNA	ACA1_349470	NW_004457316.1	9794	10494	R	ACA1_349470	complement(join(<9794..9901,10033..10078,10373..>10494))	Acanthamoeba castellanii str. Neff	14913694
ACA1_349480	mRNA	ACA1_349480	NW_004457316.1	10709	13317	R	ACA1_349480	complement(join(<10709..10756,10841..11034,11126..11246,11383..11583,11724..12044,12173..12405,12497..12670,12777..12933,13240..>13317))	Acanthamoeba castellanii str. Neff	14913695
ACA1_349490	mRNA	ACA1_349490	NW_004457316.1	13427	14197	R	ACA1_349490	complement(<13427..>14197)	Acanthamoeba castellanii str. Neff	14913696
ACA1_349500	mRNA	ACA1_349500	NW_004457316.1	14456	15030	R	ACA1_349500	complement(join(<14456..14677,14803..14875,14957..>15030))	Acanthamoeba castellanii str. Neff	14913697
ACA1_349510	mRNA	ACA1_349510	NW_004457316.1	15491	18007	R	ACA1_349510	complement(join(<15491..15599,15661..15751,15827..15917,16000..16079,16155..16224,16316..16389,16466..16600,16675..16762,16844..16939,17028..17113,17236..17370,17449..17623,17685..17861,17987..>18007))	Acanthamoeba castellanii str. Neff	14913698
ACA1_349520	mRNA	ACA1_349520	NW_004457316.1	18232	18918	D	ACA1_349520	<18232..>18918	Acanthamoeba castellanii str. Neff	14913699
ACA1_349630	mRNA	ACA1_349630	NW_004457316.1	20281	21218	R	ACA1_349630	complement(join(<20281..20675,20787..>21218))	Acanthamoeba castellanii str. Neff	14913677
ACA1_349640	mRNA	ACA1_349640	NW_004457316.1	21401	24676	D	ACA1_349640	join(<21401..21628,21644..21715,21811..21914,22011..22082,22120..22206,22267..22395,22517..22625,22704..22855,22886..22949,23083..23180,23375..23441,23528..23635,23756..23912,23997..>24676)	Acanthamoeba castellanii str. Neff	14913678
ACA1_349650	mRNA	ACA1_349650	NW_004457316.1	24837	29277	R	ACA1_349650	complement(join(<24837..25466,25552..27411,27477..28511,28612..28766,28878..>29277))	Acanthamoeba castellanii str. Neff	14913679
ACA1_349660	mRNA	ACA1_349660	NW_004457316.1	30031	32454	D	ACA1_349660	join(<30031..30140,30258..30548,30651..30871,30959..31077,31714..31955,32043..>32454)	Acanthamoeba castellanii str. Neff	14913680
ACA1_349670	mRNA	ACA1_349670	NW_004457316.1	32629	35025	R	ACA1_349670	complement(join(<32629..32729,32833..32924,32938..33001,34182..34349,34445..34494,34589..>35025))	Acanthamoeba castellanii str. Neff	14913681
ACA1_349780	mRNA	ACA1_349780	NW_004457316.1	35414	36255	D	ACA1_349780	join(<35414..35873,35955..36039,36126..>36255)	Acanthamoeba castellanii str. Neff	14913682
ACA1_349790	mRNA	ACA1_349790	NW_004457316.1	36337	37114	D	ACA1_349790	join(<36337..36398,36612..36684,36752..>37114)	Acanthamoeba castellanii str. Neff	14913683
ACA1_349800	mRNA	ACA1_349800	NW_004457316.1	37338	39045	D	ACA1_349800	join(<37338..37467,37527..37685,37773..38083,38171..38467,38707..38860,39008..>39045)	Acanthamoeba castellanii str. Neff	14913684
ACA1_349810	mRNA	ACA1_349810	NW_004457316.1	39331	39884	D	ACA1_349810	join(<39331..39450,39496..39627,39714..>39884)	Acanthamoeba castellanii str. Neff	14913685
ACA1_349820	mRNA	ACA1_349820	NW_004457316.1	39968	42707	D	ACA1_349820	join(<39968..40061,40167..40335,40413..40496,40583..40842,40934..41075,41155..41209,41344..41448,41538..41767,41840..42071,42147..>42707)	Acanthamoeba castellanii str. Neff	14913686
ACA1_349830	mRNA	ACA1_349830	NW_004457316.1	42800	45554	R	ACA1_349830	complement(join(<42800..43295,43403..43632,43734..43936,44050..44358,44427..44574,44795..45066,45182..>45554))	Acanthamoeba castellanii str. Neff	14913687
ACA1_349840	mRNA	ACA1_349840	NW_004457316.1	45653	47593	R	ACA1_349840	complement(join(<45653..45982,46092..46568,46660..46783,46847..46974,47061..47205,47279..47461,47556..>47593))	Acanthamoeba castellanii str. Neff	14913688
ACA1_350050	mRNA	ACA1_350050	NW_004457316.1	51892	54479	R	ACA1_350050	complement(join(<51892..51999,52073..52343,52452..53025,53142..53916,53966..54307,54390..>54479))	Acanthamoeba castellanii str. Neff	14913689
ACA1_301360	mRNA	ACA1_301360	NW_004457315.1	580	1285	R	ACA1_301360	complement(join(<580..1091,1102..>1285))	Acanthamoeba castellanii str. Neff	14913675
ACA1_301370	mRNA	ACA1_301370	NW_004457315.1	2070	2973	R	ACA1_301370	complement(join(<2070..2585,2734..>2973))	Acanthamoeba castellanii str. Neff	14913668
ACA1_301380	mRNA	ACA1_301380	NW_004457315.1	3085	3414	R	ACA1_301380	complement(<3085..>3414)	Acanthamoeba castellanii str. Neff	14913670
ACA1_301390	mRNA	ACA1_301390	NW_004457315.1	3570	4463	R	ACA1_301390	complement(<3570..>4463)	Acanthamoeba castellanii str. Neff	14913669
ACA1_301400	mRNA	ACA1_301400	NW_004457315.1	5199	6585	D	ACA1_301400	join(<5199..5408,5446..>6585)	Acanthamoeba castellanii str. Neff	14913672
ACA1_301410	mRNA	ACA1_301410	NW_004457315.1	8893	9504	R	ACA1_301410	complement(join(<8893..8916,9247..>9504))	Acanthamoeba castellanii str. Neff	14913673
ACA1_301420	mRNA	ACA1_301420	NW_004457315.1	9772	10089	D	ACA1_301420	<9772..>10089	Acanthamoeba castellanii str. Neff	14913674
ACA1_301430	mRNA	ACA1_301430	NW_004457315.1	12536	13297	D	ACA1_301430	<12536..>13297	Acanthamoeba castellanii str. Neff	14913671
ACA1_021690	mRNA	ACA1_021690	NW_004457314.1	46	3047	R	ACA1_021690	complement(join(<46..121,195..331,443..521,605..697,787..917,1029..1130,1226..1309,1391..1495,1598..1660,1760..1840,1939..2045,2138..2216,2306..2479,2615..2722,2874..>3047))	Acanthamoeba castellanii str. Neff	14913667
ACA1_021810	mRNA	ACA1_021810	NW_004457314.1	14128	14894	R	ACA1_021810	complement(join(<14128..14481,14580..>14894))	Acanthamoeba castellanii str. Neff	14913665
ACA1_090750	mRNA	ACA1_090750	NW_004457313.1	23	259	D	ACA1_090750	<23..>259	Acanthamoeba castellanii str. Neff	14913223
ACA1_090760	mRNA	ACA1_090760	NW_004457313.1	2022	3029	R	ACA1_090760	complement(<2022..>3029)	Acanthamoeba castellanii str. Neff	14913504
ACA1_090770	mRNA	ACA1_090770	NW_004457313.1	3289	4037	D	ACA1_090770	join(<3289..3460,3511..>4037)	Acanthamoeba castellanii str. Neff	14913337
ACA1_090780	mRNA	ACA1_090780	NW_004457313.1	4513	5821	D	ACA1_090780	join(<4513..4730,4750..>5821)	Acanthamoeba castellanii str. Neff	14913338
ACA1_090790	mRNA	ACA1_090790	NW_004457313.1	5890	6734	D	ACA1_090790	join(<5890..6252,6267..>6734)	Acanthamoeba castellanii str. Neff	14913209
ACA1_090800	mRNA	ACA1_090800	NW_004457313.1	6942	7851	R	ACA1_090800	complement(join(<6942..7141,7347..>7851))	Acanthamoeba castellanii str. Neff	14913210
ACA1_090810	mRNA	ACA1_090810	NW_004457313.1	8292	8897	R	ACA1_090810	complement(<8292..>8897)	Acanthamoeba castellanii str. Neff	14913367
ACA1_090820	mRNA	ACA1_090820	NW_004457313.1	9440	10506	R	ACA1_090820	complement(join(<9440..9929,10133..10251,10372..>10506))	Acanthamoeba castellanii str. Neff	14913368
ACA1_090830	mRNA	ACA1_090830	NW_004457313.1	10954	12036	D	ACA1_090830	<10954..>12036	Acanthamoeba castellanii str. Neff	14913369
ACA1_090840	mRNA	ACA1_090840	NW_004457313.1	16440	18031	R	ACA1_090840	complement(join(<16440..16736,17726..>18031))	Acanthamoeba castellanii str. Neff	14913370
ACA1_090950	mRNA	ACA1_090950	NW_004457313.1	18265	22512	R	ACA1_090950	complement(join(<18265..18339,18463..18670,18754..19187,19215..19262,19359..19492,19578..19762,19855..20025,20125..20229,20324..20380,20548..20617,20719..21155,21266..>22512))	Acanthamoeba castellanii str. Neff	14913572
ACA1_090960	mRNA	ACA1_090960	NW_004457313.1	23065	24914	R	ACA1_090960	complement(join(<23065..23264,23355..23490,23586..23657,23729..24009,24131..24251,24360..24478,24672..24753,24843..>24914))	Acanthamoeba castellanii str. Neff	14913573
ACA1_090980	mRNA	ACA1_090980	NW_004457313.1	32302	37512	R	ACA1_090980	complement(join(<32302..32474,32570..32676,32788..32848,32920..33031,33119..33222,33317..33415,33598..33658,33741..33830,33923..34015,34103..34168,34294..34325,34403..34496,34565..34643,34723..34808,34914..35113,35194..35280,35384..35469,35638..36115,36183..36245,36315..36430,36522..36621,36723..36786,36915..37096,37188..37296,37381..>37512))	Acanthamoeba castellanii str. Neff	14913349
ACA1_090990	mRNA	ACA1_090990	NW_004457313.1	37670	38592	R	ACA1_090990	complement(join(<37670..37812,37895..38027,38060..38146,38244..38341,38451..>38592))	Acanthamoeba castellanii str. Neff	14913350
ACA1_091000	mRNA	ACA1_091000	NW_004457313.1	39154	40153	R	ACA1_091000	complement(join(<39154..39185,39334..>40153))	Acanthamoeba castellanii str. Neff	14913639
ACA1_091010	mRNA	ACA1_091010	NW_004457313.1	40157	41555	R	ACA1_091010	complement(join(<40157..41324,41341..>41555))	Acanthamoeba castellanii str. Neff	14913640
ACA1_091020	mRNA	ACA1_091020	NW_004457313.1	43308	44582	D	ACA1_091020	join(<43308..43338,43565..43627,43710..43762,44040..44366,44427..>44582)	Acanthamoeba castellanii str. Neff	14913641
ACA1_091030	mRNA	ACA1_091030	NW_004457313.1	44586	45026	D	ACA1_091030	join(<44586..44846,45012..>45026)	Acanthamoeba castellanii str. Neff	14913642
ACA1_091040	mRNA	ACA1_091040	NW_004457313.1	45115	47317	R	ACA1_091040	complement(join(<45115..45380,45467..45578,45655..45751,45843..46034,46123..46306,46442..46615,46682..46758,46851..46974,47037..47131,47223..>47317))	Acanthamoeba castellanii str. Neff	14913446
ACA1_091050	mRNA	ACA1_091050	NW_004457313.1	47607	49763	D	ACA1_091050	join(<47607..47886,47952..48016,48083..48193,48263..48406,48452..48622,48714..48838,48905..48981,49056..49186,49263..49356,49434..49570,49707..>49763)	Acanthamoeba castellanii str. Neff	14913447
ACA1_091060	mRNA	ACA1_091060	NW_004457313.1	49919	51039	D	ACA1_091060	join(<49919..49980,50045..50214,50280..50395,50470..50599,50699..>51039)	Acanthamoeba castellanii str. Neff	14913351
ACA1_091070	mRNA	ACA1_091070	NW_004457313.1	51099	54450	R	ACA1_091070	complement(join(<51099..51209,51283..51376,51476..51585,51652..51727,51799..51920,52021..52175,52239..52363,52443..52535,52608..52723,52830..52883,52959..53083,53178..53271,53369..53460,53554..53699,53771..53854,53941..54046,54129..>54450))	Acanthamoeba castellanii str. Neff	14913352
ACA1_091080	mRNA	ACA1_091080	NW_004457313.1	54724	55451	R	ACA1_091080	complement(join(<54724..55212,55286..55323,55400..>55451))	Acanthamoeba castellanii str. Neff	14913353
ACA1_091090	mRNA	ACA1_091090	NW_004457313.1	55730	57664	R	ACA1_091090	complement(join(<55730..55803,55884..55946,56018..56133,56205..56364,56434..56542,56610..56686,56759..56828,56922..57047,57137..57250,57333..57473,57554..>57664))	Acanthamoeba castellanii str. Neff	14913596
ACA1_091100	mRNA	ACA1_091100	NW_004457313.1	57976	58551	D	ACA1_091100	join(<57976..58104,58189..58264,58397..>58551)	Acanthamoeba castellanii str. Neff	14913597
ACA1_091110	mRNA	ACA1_091110	NW_004457313.1	58639	61009	D	ACA1_091110	join(<58639..59067,59314..59413,59675..59714,59827..59957,60197..60283,60346..60460,60537..60807,60890..>61009)	Acanthamoeba castellanii str. Neff	14913401
ACA1_091120	mRNA	ACA1_091120	NW_004457313.1	61091	62761	D	ACA1_091120	join(<61091..61279,61368..61430,61509..61681,61734..62181,62274..62398,62451..62596,62688..>62761)	Acanthamoeba castellanii str. Neff	14913402
ACA1_091130	mRNA	ACA1_091130	NW_004457313.1	63176	65218	R	ACA1_091130	complement(join(<63176..63924,63987..64085,64148..64220,64279..64356,64684..64904,64999..>65218))	Acanthamoeba castellanii str. Neff	14913403
ACA1_091140	mRNA	ACA1_091140	NW_004457313.1	65445	67558	R	ACA1_091140	complement(join(<65445..65620,65692..66200,66315..66507,66610..66763,66864..67259,67454..>67558))	Acanthamoeba castellanii str. Neff	14913438
ACA1_091150	mRNA	ACA1_091150	NW_004457313.1	67928	69448	D	ACA1_091150	<67928..>69448	Acanthamoeba castellanii str. Neff	14913439
ACA1_091160	mRNA	ACA1_091160	NW_004457313.1	69556	74008	R	ACA1_091160	complement(join(<69556..70097,70192..70281,70367..70472,70578..70689,70777..70874,70953..71072,71159..71326,71427..71504,71697..71855,71929..72066,72175..72572,72646..72992,73309..73460,73564..73741,73890..>74008))	Acanthamoeba castellanii str. Neff	14913440
ACA1_091270	mRNA	ACA1_091270	NW_004457313.1	74290	75644	D	ACA1_091270	join(<74290..74432,74516..74840,74939..75187,75251..75399,75470..>75644)	Acanthamoeba castellanii str. Neff	14913387
ACA1_091280	mRNA	ACA1_091280	NW_004457313.1	76674	76958	D	ACA1_091280	join(<76674..76696,76793..>76958)	Acanthamoeba castellanii str. Neff	14913388
ACA1_091290	mRNA	ACA1_091290	NW_004457313.1	77607	78075	R	ACA1_091290	complement(join(<77607..77755,77848..77881,77932..>78075))	Acanthamoeba castellanii str. Neff	14913239
ACA1_091300	mRNA	ACA1_091300	NW_004457313.1	78568	81546	R	ACA1_091300	complement(join(<78568..78713,78810..78918,78992..79290,79360..79545,79718..79822,79891..79975,80048..80167,80239..80433,80586..80677,80853..81117,81241..>81546))	Acanthamoeba castellanii str. Neff	14913240
ACA1_091310	mRNA	ACA1_091310	NW_004457313.1	81709	84977	D	ACA1_091310	join(<81709..81824,81905..81947,82029..82076,82160..82203,82284..82404,82491..82568,82692..82796,82879..83264,83356..83460,83566..83730,83818..83971,84066..84196,84277..84351,84452..84602,84686..84808,84951..>84977)	Acanthamoeba castellanii str. Neff	14913241
ACA1_091320	mRNA	ACA1_091320	NW_004457313.1	85735	88668	D	ACA1_091320	join(<85735..85967,86185..86445,86520..86668,86824..87077,87178..87342,87387..87490,87632..87786,87850..88076,88173..88373,88480..>88668)	Acanthamoeba castellanii str. Neff	14913335
ACA1_091330	mRNA	ACA1_091330	NW_004457313.1	88809	91124	R	ACA1_091330	complement(join(<88809..88949,89044..89209,89286..89467,89580..89720,89792..90103,90193..90528,90678..90848,90999..>91124))	Acanthamoeba castellanii str. Neff	14913336
ACA1_091340	mRNA	ACA1_091340	NW_004457313.1	91696	94537	D	ACA1_091340	join(<91696..92053,92169..92491,92657..92744,92877..93112,93202..93307,93408..93748,93831..94084,94190..94393,94474..>94537)	Acanthamoeba castellanii str. Neff	14913637
ACA1_091350	mRNA	ACA1_091350	NW_004457313.1	94654	95388	R	ACA1_091350	complement(<94654..>95388)	Acanthamoeba castellanii str. Neff	14913638
ACA1_091360	mRNA	ACA1_091360	NW_004457313.1	95464	95976	D	ACA1_091360	<95464..>95976	Acanthamoeba castellanii str. Neff	14913548
ACA1_091370	mRNA	ACA1_091370	NW_004457313.1	96052	96985	R	ACA1_091370	complement(join(<96052..96105,96171..96251,96326..96478,96495..96568,96599..96712,96790..>96985))	Acanthamoeba castellanii str. Neff	14913549
ACA1_091380	mRNA	ACA1_091380	NW_004457313.1	97253	105361	R	ACA1_091380	complement(join(<97253..97581,97689..97845,97945..98181,98271..99118,99199..99430,99511..99810,99860..99948,100041..100173,100256..100438,100514..100590,100680..100784,100869..100947,101028..101402,101502..101927,102004..102294,102373..102438,102508..102681,102738..102878,102963..103112,103210..103392,103471..103680,103756..103881,103956..104143,104225..104333,104413..104583,104679..104834,105086..>105361))	Acanthamoeba castellanii str. Neff	14913550
ACA1_091390	mRNA	ACA1_091390	NW_004457313.1	105782	106659	D	ACA1_091390	join(<105782..105815,105939..106015,106080..106149,106244..>106659)	Acanthamoeba castellanii str. Neff	14913551
ACA1_091400	mRNA	ACA1_091400	NW_004457313.1	107119	107730	D	ACA1_091400	join(<107119..107126,107176..107252,107327..107462,107541..>107730)	Acanthamoeba castellanii str. Neff	14913311
ACA1_091410	mRNA	ACA1_091410	NW_004457313.1	107948	115271	R	ACA1_091410	complement(join(<107948..108030,108112..108487,108599..108808,108883..109381,109464..109597,109686..109919,109999..110169,110242..110573,110658..110828,110891..111170,111253..111332,111400..111655,111715..111876,111952..112039,112113..112246,112319..112551,112631..112826,112887..112970,113035..113246,113315..113477,113540..113824,113887..114021,114089..114259,114327..114469,114541..114760,114846..114982,115049..>115271))	Acanthamoeba castellanii str. Neff	14913354
ACA1_091420	mRNA	ACA1_091420	NW_004457313.1	115745	118256	D	ACA1_091420	join(<115745..115828,115897..116004,116065..116383,116439..116553,116649..116852,116927..117060,117296..117487,117548..117693,117751..117842,117896..>118256)	Acanthamoeba castellanii str. Neff	14913355
ACA1_091430	mRNA	ACA1_091430	NW_004457313.1	118534	123549	D	ACA1_091430	<118534..>123549	Acanthamoeba castellanii str. Neff	14913191
ACA1_091440	mRNA	ACA1_091440	NW_004457313.1	123848	125160	D	ACA1_091440	join(<123848..123919,123995..124093,124167..124250,124325..124687,124774..124904,125025..>125160)	Acanthamoeba castellanii str. Neff	14913192
ACA1_091450	mRNA	ACA1_091450	NW_004457313.1	125492	127162	D	ACA1_091450	join(<125492..125507,125587..125660,125733..125855,125938..126053,126133..126244,126319..126431,126510..126729,126816..126915,126984..>127162)	Acanthamoeba castellanii str. Neff	14913193
ACA1_091460	mRNA	ACA1_091460	NW_004457313.1	127195	127559	R	ACA1_091460	complement(join(<127195..127347,127452..>127559))	Acanthamoeba castellanii str. Neff	14913157
ACA1_091470	mRNA	ACA1_091470	NW_004457313.1	127639	129505	R	ACA1_091470	complement(join(<127639..127675,127787..127830,127863..128009,128114..128205,128272..128462,128565..128650,128743..128879,128979..129166,129228..129323,129384..>129505))	Acanthamoeba castellanii str. Neff	14913158
ACA1_091480	mRNA	ACA1_091480	NW_004457313.1	129666	130998	R	ACA1_091480	complement(join(<129666..129755,129871..129930,130135..130236,130300..130370,130438..130549,130632..130784,130850..130881,130950..>130998))	Acanthamoeba castellanii str. Neff	14913519
ACA1_091490	mRNA	ACA1_091490	NW_004457313.1	131433	133342	D	ACA1_091490	join(<131433..131655,131734..131814,131901..132029,132099..132208,132278..132814,132910..133089,133217..>133342)	Acanthamoeba castellanii str. Neff	14913520
ACA1_091500	mRNA	ACA1_091500	NW_004457313.1	133744	134664	D	ACA1_091500	join(<133744..133892,134003..134183,134273..134524,134611..>134664)	Acanthamoeba castellanii str. Neff	14913521
ACA1_091510	mRNA	ACA1_091510	NW_004457313.1	134965	135606	D	ACA1_091510	<134965..>135606	Acanthamoeba castellanii str. Neff	14913110
ACA1_091520	mRNA	ACA1_091520	NW_004457313.1	135699	138578	R	ACA1_091520	complement(join(<135699..136020,136109..136186,136284..136398,136475..136609,136725..136839,136919..137075,137173..137608,137713..137773,137839..137931,138029..138100,138202..138329,138398..>138578))	Acanthamoeba castellanii str. Neff	14913111
ACA1_091530	mRNA	ACA1_091530	NW_004457313.1	138847	139900	D	ACA1_091530	join(<138847..139067,139157..139274,139356..139495,139603..139677,139774..>139900)	Acanthamoeba castellanii str. Neff	14913112
ACA1_091540	mRNA	ACA1_091540	NW_004457313.1	140034	140969	R	ACA1_091540	complement(join(<140034..140123,140212..140314,140404..140617,140648..140745,140824..>140969))	Acanthamoeba castellanii str. Neff	14913621
ACA1_091550	mRNA	ACA1_091550	NW_004457313.1	141544	146567	D	ACA1_091550	join(<141544..141938,142218..142358,142461..143020,143141..143820,143928..144004,144119..144269,144345..144469,144547..144747,144847..144992,145040..145221,145315..145478,145581..145728,145845..>146567)	Acanthamoeba castellanii str. Neff	14913622
ACA1_091560	mRNA	ACA1_091560	NW_004457313.1	148985	151382	D	ACA1_091560	join(<148985..149016,149098..149168,149224..149389,149459..149513,149603..149699,149764..149958,150041..150152,150226..150319,150427..151025,151112..>151382)	Acanthamoeba castellanii str. Neff	14913140
ACA1_091570	mRNA	ACA1_091570	NW_004457313.1	151499	152751	D	ACA1_091570	join(<151499..151618,151699..151851,152014..152139,152228..152344,152429..152554,152653..>152751)	Acanthamoeba castellanii str. Neff	14913141
ACA1_091580	mRNA	ACA1_091580	NW_004457313.1	152783	154552	R	ACA1_091580	complement(join(<152783..153319,153404..>154552))	Acanthamoeba castellanii str. Neff	14913634
ACA1_091590	mRNA	ACA1_091590	NW_004457313.1	154797	156800	R	ACA1_091590	complement(join(<154797..155316,155427..155523,155666..155729,155829..156460,156587..156643,156753..>156800))	Acanthamoeba castellanii str. Neff	14913635
ACA1_091600	mRNA	ACA1_091600	NW_004457313.1	157196	163165	D	ACA1_091600	join(<157196..157394,157626..157751,157872..157988,158079..158312,158414..158536,158615..158694,158764..159043,159122..159223,159316..159496,159592..159743,159827..160050,160125..160181,160275..160379,160460..160612,160708..160797,160875..161097,161182..161333,161417..161494,161595..161733,161812..162014,162096..162177,162252..162410,162506..162669,162782..>163165)	Acanthamoeba castellanii str. Neff	14913636
ACA1_091610	mRNA	ACA1_091610	NW_004457313.1	163532	165149	R	ACA1_091610	complement(join(<163532..164734,164757..>165149))	Acanthamoeba castellanii str. Neff	14913568
ACA1_091620	mRNA	ACA1_091620	NW_004457313.1	165348	165858	D	ACA1_091620	join(<165348..165462,165532..165653,165739..>165858)	Acanthamoeba castellanii str. Neff	14913569
ACA1_091630	mRNA	ACA1_091630	NW_004457313.1	166338	168030	R	ACA1_091630	complement(join(<166338..166688,166762..166883,166959..>168030))	Acanthamoeba castellanii str. Neff	14913453
ACA1_091640	mRNA	ACA1_091640	NW_004457313.1	168387	169909	R	ACA1_091640	complement(join(<168387..168450,168523..168617,168682..168765,168840..168952,169021..169078,169143..169207,169295..169417,169497..169653,169736..>169909))	Acanthamoeba castellanii str. Neff	14913454
ACA1_091650	mRNA	ACA1_091650	NW_004457313.1	170199	171083	R	ACA1_091650	complement(join(<170199..170371,170464..170845,170925..>171083))	Acanthamoeba castellanii str. Neff	14913455
ACA1_091660	mRNA	ACA1_091660	NW_004457313.1	171513	173879	R	ACA1_091660	complement(join(<171513..172112,172198..172468,172557..172683,172782..172923,172991..173128,173218..173547,173616..>173879))	Acanthamoeba castellanii str. Neff	14913645
ACA1_091670	mRNA	ACA1_091670	NW_004457313.1	174044	175447	R	ACA1_091670	complement(join(<174044..174951,175046..175246,175390..>175447))	Acanthamoeba castellanii str. Neff	14913646
ACA1_091680	mRNA	ACA1_091680	NW_004457313.1	176044	176436	R	ACA1_091680	complement(<176044..>176436)	Acanthamoeba castellanii str. Neff	14913647
ACA1_091690	mRNA	ACA1_091690	NW_004457313.1	180958	183749	D	ACA1_091690	join(<180958..181137,181272..181380,181458..181591,181681..181782,181893..181969,182035..182122,182216..182529,182598..182880,182953..183122,183193..183290,183353..183423,183518..183566,183640..>183749)	Acanthamoeba castellanii str. Neff	14913552
ACA1_091700	mRNA	ACA1_091700	NW_004457313.1	183802	185405	R	ACA1_091700	complement(join(<183802..184018,184105..184403,184515..184677,184765..184932,185011..185091,185191..>185405))	Acanthamoeba castellanii str. Neff	14913553
ACA1_091710	mRNA	ACA1_091710	NW_004457313.1	185556	188161	R	ACA1_091710	complement(join(<185556..185733,185832..185937,185996..186268,186375..187013,187099..187300,187384..187443,187542..187706,187796..>188161))	Acanthamoeba castellanii str. Neff	14913554
ACA1_091720	mRNA	ACA1_091720	NW_004457313.1	188511	188723	D	ACA1_091720	<188511..>188723	Acanthamoeba castellanii str. Neff	14913581
ACA1_091730	mRNA	ACA1_091730	NW_004457313.1	189054	190751	D	ACA1_091730	join(<189054..189555,189638..189697,189777..189871,190000..190066,190161..190228,190367..190559,190624..>190751)	Acanthamoeba castellanii str. Neff	14913582
ACA1_091740	mRNA	ACA1_091740	NW_004457313.1	191189	195173	D	ACA1_091740	join(<191189..191257,191336..191388,191486..191642,191745..191855,191947..191996,192125..192209,192308..192412,192501..192596,192706..192783,192851..193003,193037..193168,193268..193381,193554..>195173)	Acanthamoeba castellanii str. Neff	14913583
ACA1_091750	mRNA	ACA1_091750	NW_004457313.1	196391	197468	R	ACA1_091750	complement(join(<196391..196460,196595..196695,196828..196882,196904..196956,197038..197079,197199..>197468))	Acanthamoeba castellanii str. Neff	14913495
ACA1_091760	mRNA	ACA1_091760	NW_004457313.1	197829	199623	R	ACA1_091760	complement(join(<197829..197912,197995..198104,198192..198367,198448..198521,198592..198713,198794..199002,199078..199207,199287..199374,199456..>199623))	Acanthamoeba castellanii str. Neff	14913496
ACA1_091770	mRNA	ACA1_091770	NW_004457313.1	199723	200722	D	ACA1_091770	join(<199723..200023,200105..200154,200216..200383,200440..200534,200614..>200722)	Acanthamoeba castellanii str. Neff	14913181
ACA1_091780	mRNA	ACA1_091780	NW_004457313.1	200823	202905	D	ACA1_091780	join(<200823..201051,201132..201412,201507..201663,201737..201900,201981..202061,202140..202246,202313..202469,202546..>202905)	Acanthamoeba castellanii str. Neff	14913182
ACA1_091790	mRNA	ACA1_091790	NW_004457313.1	202965	203591	R	ACA1_091790	complement(<202965..>203591)	Acanthamoeba castellanii str. Neff	14913176
ACA1_091800	mRNA	ACA1_091800	NW_004457313.1	203708	205824	R	ACA1_091800	complement(join(<203708..203977,204050..204158,204267..204345,204421..204529,204629..204701,204738..204831,205019..205153,205168..205365,205485..>205824))	Acanthamoeba castellanii str. Neff	14913177
ACA1_091810	mRNA	ACA1_091810	NW_004457313.1	205965	206279	R	ACA1_091810	complement(<205965..>206279)	Acanthamoeba castellanii str. Neff	14913178
ACA1_091820	mRNA	ACA1_091820	NW_004457313.1	207031	210554	R	ACA1_091820	complement(join(<207031..207195,207295..207486,207565..207666,207756..207827,207910..208247,208325..208396,208471..208641,208716..208845,208922..208986,209070..209185,209252..209307,209404..209483,209580..209668,209745..209821,209922..210057,210135..210219,210341..>210554))	Acanthamoeba castellanii str. Neff	14913486
ACA1_091830	mRNA	ACA1_091830	NW_004457313.1	210855	212349	R	ACA1_091830	complement(join(<210855..211102,211255..211293,211373..211504,211588..211688,211788..211850,211932..212028,212259..>212349))	Acanthamoeba castellanii str. Neff	14913487
ACA1_091840	mRNA	ACA1_091840	NW_004457313.1	212570	215058	D	ACA1_091840	join(<212570..212606,212669..212916,212977..213128,213218..213548,213621..213776,213882..214059,214133..214192,214255..214394,214497..214671,214730..>215058)	Acanthamoeba castellanii str. Neff	14913488
ACA1_091850	mRNA	ACA1_091850	NW_004457313.1	215094	217106	R	ACA1_091850	complement(join(<215094..215285,215363..215481,215561..215660,215741..215846,215926..216199,216298..216528,216723..216915,217023..>217106))	Acanthamoeba castellanii str. Neff	14913450
ACA1_091860	mRNA	ACA1_091860	NW_004457313.1	217732	218848	D	ACA1_091860	join(<217732..217913,217983..218029,218104..218250,218379..218497,218687..>218848)	Acanthamoeba castellanii str. Neff	14913451
ACA1_091870	mRNA	ACA1_091870	NW_004457313.1	218997	219606	R	ACA1_091870	complement(join(<218997..219070,219156..219368,219429..>219606))	Acanthamoeba castellanii str. Neff	14913126
ACA1_091880	mRNA	ACA1_091880	NW_004457313.1	219779	220944	D	ACA1_091880	join(<219779..219989,220049..220189,220279..220382,220451..220522,220629..220745,220834..>220944)	Acanthamoeba castellanii str. Neff	14913127
ACA1_091890	mRNA	ACA1_091890	NW_004457313.1	221095	223522	D	ACA1_091890	join(<221095..221498,221625..221710,221796..221884,221991..222076,222166..222276,222398..222637,222743..222882,222978..223152,223252..>223522)	Acanthamoeba castellanii str. Neff	14913128
ACA1_091900	mRNA	ACA1_091900	NW_004457313.1	223626	224351	R	ACA1_091900	complement(join(<223626..223935,224033..224146,224209..224221,224306..>224351))	Acanthamoeba castellanii str. Neff	14913201
ACA1_091910	mRNA	ACA1_091910	NW_004457313.1	224475	226381	R	ACA1_091910	complement(join(<224475..224562,224682..224744,224812..224952,225045..225149,225225..225369,225466..225577,225698..225769,226149..226226,226298..>226381))	Acanthamoeba castellanii str. Neff	14913202
ACA1_091920	mRNA	ACA1_091920	NW_004457313.1	226674	229845	D	ACA1_091920	join(<226674..226785,226880..226980,227080..227179,227290..227351,227481..227539,227638..227830,227949..228047,228167..228369,228474..228603,228684..228796,228891..228998,229103..229250,229358..229407,229483..229643,229730..>229845)	Acanthamoeba castellanii str. Neff	14913448
ACA1_091930	mRNA	ACA1_091930	NW_004457313.1	229994	231947	R	ACA1_091930	complement(join(<229994..230258,230343..230498,230580..230656,230730..230841,230939..231164,231234..231444,231533..231634,231708..>231947))	Acanthamoeba castellanii str. Neff	14913449
ACA1_091940	mRNA	ACA1_091940	NW_004457313.1	232249	234754	R	ACA1_091940	complement(join(<232249..232420,232497..232681,232752..232853,232914..233021,233091..233207,233282..233382,233451..233756,233844..233981,234051..234122,234193..234305,234371..234444,234516..234601,234682..>234754))	Acanthamoeba castellanii str. Neff	14913174
ACA1_091950	mRNA	ACA1_091950	NW_004457313.1	234855	235646	R	ACA1_091950	complement(join(<234855..234938,235008..235130,235225..235343,235430..>235646))	Acanthamoeba castellanii str. Neff	14913175
ACA1_091960	mRNA	ACA1_091960	NW_004457313.1	235804	237670	R	ACA1_091960	complement(join(<235804..236286,236375..236516,236692..236779,236852..236987,237088..237349,237464..237518,237580..>237670))	Acanthamoeba castellanii str. Neff	14913101
ACA1_091970	mRNA	ACA1_091970	NW_004457313.1	238403	239558	R	ACA1_091970	complement(join(<238403..238416,238481..238607,238693..239218,239500..>239558))	Acanthamoeba castellanii str. Neff	14913102
ACA1_091980	mRNA	ACA1_091980	NW_004457313.1	240252	241809	D	ACA1_091980	join(<240252..240448,240521..240590,240660..240788,240876..240963,241178..241333,241709..>241809)	Acanthamoeba castellanii str. Neff	14913103
ACA1_091990	mRNA	ACA1_091990	NW_004457313.1	242254	242865	D	ACA1_091990	<242254..>242865	Acanthamoeba castellanii str. Neff	14913257
ACA1_092000	mRNA	ACA1_092000	NW_004457313.1	243063	245395	R	ACA1_092000	complement(join(<243063..243171,243346..243958,244036..244151,244262..244323,244433..244529,244655..244784,244857..244995,245018..245043,245293..>245395))	Acanthamoeba castellanii str. Neff	14913258
ACA1_092010	mRNA	ACA1_092010	NW_004457313.1	246966	248302	D	ACA1_092010	join(<246966..247337,247444..247689,247764..247849,247933..248172,248254..>248302)	Acanthamoeba castellanii str. Neff	14913259
ACA1_092020	mRNA	ACA1_092020	NW_004457313.1	249299	250240	D	ACA1_092020	join(<249299..249535,249647..249737,249875..250066,250194..>250240)	Acanthamoeba castellanii str. Neff	14913407
ACA1_092030	mRNA	ACA1_092030	NW_004457313.1	250923	252507	R	ACA1_092030	complement(join(<250923..251449,251528..251575,251667..251736,251840..251922,252003..>252507))	Acanthamoeba castellanii str. Neff	14913408
ACA1_092040	mRNA	ACA1_092040	NW_004457313.1	252814	254788	D	ACA1_092040	join(<252814..252930,253017..253185,253249..253340,253416..253501,253576..253652,253713..253839,253909..253973,254049..254175,254260..254701,254771..>254788)	Acanthamoeba castellanii str. Neff	14913409
ACA1_092050	mRNA	ACA1_092050	NW_004457313.1	255165	260343	D	ACA1_092050	join(<255165..255219,255302..255390,255449..255655,255803..255943,256038..256356,256429..256570,256645..256751,256838..256870,256910..256987,257057..257169,257239..257466,257531..257652,257733..257881,257959..258106,258193..258715,258789..258905,258985..259081,259180..259398,259476..259527,259617..>260343)	Acanthamoeba castellanii str. Neff	14913267
ACA1_092060	mRNA	ACA1_092060	NW_004457313.1	260432	261981	D	ACA1_092060	join(<260432..260693,260769..261215,261294..261599,261665..>261981)	Acanthamoeba castellanii str. Neff	14913268
ACA1_092070	mRNA	ACA1_092070	NW_004457313.1	262087	264894	D	ACA1_092070	join(<262087..262272,262356..262475,262676..263210,263313..263347,263387..263539,263628..263801,263893..264183,264325..>264894)	Acanthamoeba castellanii str. Neff	14913660
ACA1_092080	mRNA	ACA1_092080	NW_004457313.1	265067	267290	R	ACA1_092080	complement(join(<265067..265170,265362..265412,265507..265555,265637..265750,265835..265889,265992..266077,266168..266268,266355..266445,266543..266642,266717..266830,266921..266970,267093..>267290))	Acanthamoeba castellanii str. Neff	14913661
ACA1_092090	mRNA	ACA1_092090	NW_004457313.1	267562	269706	R	ACA1_092090	complement(join(<267562..267784,267901..268072,268151..268358,268441..268533,268781..268915,269007..269084,269206..>269706))	Acanthamoeba castellanii str. Neff	14913662
ACA1_092100	mRNA	ACA1_092100	NW_004457313.1	269963	270952	D	ACA1_092100	join(<269963..270145,270251..>270952)	Acanthamoeba castellanii str. Neff	14913471
ACA1_092110	mRNA	ACA1_092110	NW_004457313.1	271318	273177	D	ACA1_092110	join(<271318..271525,271618..271725,271835..271960,272027..272142,272219..272272,272378..272437,272513..272620,272724..272847,272999..>273177)	Acanthamoeba castellanii str. Neff	14913472
ACA1_092120	mRNA	ACA1_092120	NW_004457313.1	273243	275838	R	ACA1_092120	complement(join(<273243..273725,273745..274050,274191..274364,274460..274612,274652..274686,274783..275207,275440..275570,275656..>275838))	Acanthamoeba castellanii str. Neff	14913319
ACA1_092130	mRNA	ACA1_092130	NW_004457313.1	276906	283677	R	ACA1_092130	complement(join(<276906..277222,277293..277598,277677..278117,278188..279164,279246..279297,279379..279588,279674..279770,279846..279962,280048..280570,280637..280784,280859..281007,281085..281206,281296..281529,281596..281687,281785..281934,281996..282102,282172..282313,282375..282537,282613..282774,282876..283016,283204..283477,283494..283569,283629..>283677))	Acanthamoeba castellanii str. Neff	14913320
ACA1_092140	mRNA	ACA1_092140	NW_004457313.1	284149	285780	D	ACA1_092140	join(<284149..284262,284322..284380,284456..284585,284665..284727,284900..284959,285078..285172,285237..285331,285420..285565,285724..>285780)	Acanthamoeba castellanii str. Neff	14913379
ACA1_092150	mRNA	ACA1_092150	NW_004457313.1	286386	289381	D	ACA1_092150	join(<286386..286946,287086..287172,287290..287538,287614..287712,287875..288226,288321..288493,288521..>289381)	Acanthamoeba castellanii str. Neff	14913380
ACA1_092160	mRNA	ACA1_092160	NW_004457313.1	289473	290967	D	ACA1_092160	join(<289473..289695,289789..290019,290096..290185,290249..290375,290463..290576,290617..290694,290784..>290967)	Acanthamoeba castellanii str. Neff	14913274
ACA1_092170	mRNA	ACA1_092170	NW_004457313.1	291074	293852	D	ACA1_092170	join(<291074..291100,291143..291199,291296..291431,291554..291682,291754..291822,291955..292045,292155..292270,292348..292390,292541..292601,292709..292813,292939..293148,293276..293460,293553..293629,293710..293751,293815..>293852)	Acanthamoeba castellanii str. Neff	14913275
ACA1_092180	mRNA	ACA1_092180	NW_004457313.1	294008	294502	R	ACA1_092180	complement(<294008..>294502)	Acanthamoeba castellanii str. Neff	14913516
ACA1_092190	mRNA	ACA1_092190	NW_004457313.1	294622	296248	R	ACA1_092190	complement(join(<294622..295156,295292..295404,295558..295586,295664..295806,295936..296051,296171..>296248))	Acanthamoeba castellanii str. Neff	14913517
ACA1_092200	mRNA	ACA1_092200	NW_004457313.1	296305	299853	R	ACA1_092200	complement(join(<296305..296729,296810..297043,297233..297383,297490..297621,297688..297723,297745..297869,297933..298048,298122..299057,299076..299129,299588..>299853))	Acanthamoeba castellanii str. Neff	14913518
ACA1_092210	mRNA	ACA1_092210	NW_004457313.1	300615	301956	R	ACA1_092210	complement(join(<300615..300938,301052..301148,301222..301421,301479..301694,301822..>301956))	Acanthamoeba castellanii str. Neff	14913317
ACA1_092220	mRNA	ACA1_092220	NW_004457313.1	302219	303998	R	ACA1_092220	complement(join(<302219..302320,302391..302546,302610..302676,302793..302890,302976..303106,303216..303332,303408..303591,303744..>303998))	Acanthamoeba castellanii str. Neff	14913318
ACA1_092230	mRNA	ACA1_092230	NW_004457313.1	307866	308042	D	ACA1_092230	<307866..>308042	Acanthamoeba castellanii str. Neff	14913562
ACA1_092340	mRNA	ACA1_092340	NW_004457313.1	315207	316758	D	ACA1_092340	join(<315207..315420,315482..315609,315717..315771,315894..316054,316681..>316758)	Acanthamoeba castellanii str. Neff	14913563
ACA1_092350	mRNA	ACA1_092350	NW_004457313.1	317982	320309	D	ACA1_092350	join(<317982..318020,318119..318214,318385..318609,318679..319195,319299..319379,319480..>320309)	Acanthamoeba castellanii str. Neff	14913564
ACA1_092360	mRNA	ACA1_092360	NW_004457313.1	320529	324252	R	ACA1_092360	complement(join(<320529..322248,322330..322517,322601..323065,323142..323578,323667..>324252))	Acanthamoeba castellanii str. Neff	14913593
ACA1_092370	mRNA	ACA1_092370	NW_004457313.1	324704	328692	R	ACA1_092370	complement(join(<324704..324772,324842..324962,325083..325167,325232..325501,325545..325628,325704..325873,325982..326045,326125..326189,326330..326448,326534..326650,326737..326931,327024..327206,327280..327401,327585..327735,327814..327913,328022..328241,328309..328480,328564..>328692))	Acanthamoeba castellanii str. Neff	14913594
ACA1_092380	mRNA	ACA1_092380	NW_004457313.1	328814	331854	R	ACA1_092380	complement(join(<328814..329125,329222..329364,329429..330764,331129..331189,331256..331345,331411..331549,331632..>331854))	Acanthamoeba castellanii str. Neff	14913595
ACA1_092390	mRNA	ACA1_092390	NW_004457313.1	332020	333408	D	ACA1_092390	join(<332020..332178,332240..332392,332492..332568,332632..332876,332938..333051,333108..333185,333251..>333408)	Acanthamoeba castellanii str. Neff	14913456
ACA1_092400	mRNA	ACA1_092400	NW_004457313.1	333517	334915	D	ACA1_092400	join(<333517..333949,334057..334156,334223..334331,334402..334516,334669..334684,334759..>334915)	Acanthamoeba castellanii str. Neff	14913457
ACA1_092410	mRNA	ACA1_092410	NW_004457313.1	335158	336314	D	ACA1_092410	join(<335158..335296,335374..>336314)	Acanthamoeba castellanii str. Neff	14913531
ACA1_092420	mRNA	ACA1_092420	NW_004457313.1	336480	339765	D	ACA1_092420	join(<336480..336512,336715..336820,336899..337061,337165..337440,337560..337707,337818..337894,337961..338082,338249..338869,338960..339050,339144..339302,339391..339488,339734..>339765)	Acanthamoeba castellanii str. Neff	14913532
ACA1_092430	mRNA	ACA1_092430	NW_004457313.1	339686	341199	R	ACA1_092430	complement(join(<339686..339963,340051..340264,340369..340451,340547..340877,340926..341020,341085..>341199))	Acanthamoeba castellanii str. Neff	14913533
ACA1_092460	mRNA	ACA1_092460	NW_004457313.1	351692	354763	D	ACA1_092460	join(<351692..351766,352133..353199,353293..353408,353485..353539,353627..354027,354102..>354763)	Acanthamoeba castellanii str. Neff	14913477
ACA1_092580	mRNA	ACA1_092580	NW_004457313.1	359683	360856	D	ACA1_092580	join(<359683..359883,360065..360533,360607..360774,360834..>360856)	Acanthamoeba castellanii str. Neff	14913159
ACA1_092590	mRNA	ACA1_092590	NW_004457313.1	360961	363402	R	ACA1_092590	complement(join(<360961..361078,361160..361322,361407..361504,361581..361801,361844..361941,362014..362125,362197..362475,362548..362893,362966..>363402))	Acanthamoeba castellanii str. Neff	14913160
ACA1_092600	mRNA	ACA1_092600	NW_004457313.1	363562	364884	R	ACA1_092600	complement(join(<363562..363642,363713..363984,364062..364257,364332..364469,364544..364699,364810..>364884))	Acanthamoeba castellanii str. Neff	14913161
ACA1_092610	mRNA	ACA1_092610	NW_004457313.1	365710	368759	D	ACA1_092610	join(<365710..366553,366640..366774,366855..366970,367057..367198,367222..367354,367419..367539,367675..367815,367913..368078,368252..368438,368525..>368759)	Acanthamoeba castellanii str. Neff	14913324
ACA1_092620	mRNA	ACA1_092620	NW_004457313.1	369054	370307	D	ACA1_092620	join(<369054..369113,369309..369428,369486..369584,369625..369951,370038..370107,370153..>370307)	Acanthamoeba castellanii str. Neff	14913325
ACA1_092630	mRNA	ACA1_092630	NW_004457313.1	371068	372054	D	ACA1_092630	join(<371068..371250,371327..371826,371940..>372054)	Acanthamoeba castellanii str. Neff	14913326
ACA1_092640	mRNA	ACA1_092640	NW_004457313.1	373192	376143	R	ACA1_092640	complement(join(<373192..373302,373379..373459,373559..373780,373861..373983,374159..374287,374394..374545,374637..374728,374827..374890,374972..375101,375220..375308,375381..375437,375533..375623,375757..375902,376011..>376143))	Acanthamoeba castellanii str. Neff	14913441
ACA1_092650	mRNA	ACA1_092650	NW_004457313.1	377032	378719	D	ACA1_092650	join(<377032..377208,377288..377728,377814..378120,378179..378276,378360..>378719)	Acanthamoeba castellanii str. Neff	14913442
ACA1_092660	mRNA	ACA1_092660	NW_004457313.1	378869	379701	R	ACA1_092660	complement(join(<378869..379049,379144..379254,379362..379516,379588..>379701))	Acanthamoeba castellanii str. Neff	14913648
ACA1_092670	mRNA	ACA1_092670	NW_004457313.1	379819	381818	D	ACA1_092670	join(<379819..380283,380368..380450,380564..380710,380772..380948,381026..381193,381281..>381818)	Acanthamoeba castellanii str. Neff	14913649
ACA1_092680	mRNA	ACA1_092680	NW_004457313.1	381939	384257	R	ACA1_092680	complement(join(<381939..382265,382358..382957,383179..383468,383567..384032,384138..>384257))	Acanthamoeba castellanii str. Neff	14913650
ACA1_092690	mRNA	ACA1_092690	NW_004457313.1	384409	385013	R	ACA1_092690	complement(join(<384409..384505,384571..>385013))	Acanthamoeba castellanii str. Neff	14913628
ACA1_092700	mRNA	ACA1_092700	NW_004457313.1	386134	386748	D	ACA1_092700	join(<386134..386178,386237..386462,386543..>386748)	Acanthamoeba castellanii str. Neff	14913629
ACA1_092710	mRNA	ACA1_092710	NW_004457313.1	386902	390378	R	ACA1_092710	complement(join(<386902..388071,388127..388296,388428..389186,389271..389542,389682..389776,389914..389993,390288..>390378))	Acanthamoeba castellanii str. Neff	14913630
ACA1_092730	mRNA	ACA1_092730	NW_004457313.1	391833	395349	R	ACA1_092730	complement(join(<391833..392143,392255..392419,392536..392619,392755..392952,393065..393167,393250..393372,393488..393543,393640..393747,393876..394097,394257..394365,394459..394599,394696..>395349))	Acanthamoeba castellanii str. Neff	14913343
ACA1_092740	mRNA	ACA1_092740	NW_004457313.1	395540	396742	D	ACA1_092740	join(<395540..396065,396408..>396742)	Acanthamoeba castellanii str. Neff	14913344
ACA1_092750	mRNA	ACA1_092750	NW_004457313.1	396871	398249	R	ACA1_092750	complement(join(<396871..397230,397321..397633,397728..397795,397866..397979,398154..>398249))	Acanthamoeba castellanii str. Neff	14913508
ACA1_092760	mRNA	ACA1_092760	NW_004457313.1	398551	400204	R	ACA1_092760	complement(join(<398551..398964,399012..399191,399265..399460,399553..400039,400096..>400204))	Acanthamoeba castellanii str. Neff	14913509
ACA1_092770	mRNA	ACA1_092770	NW_004457313.1	400293	402128	R	ACA1_092770	complement(join(<400293..400522,400617..400679,400911..401628,401731..401933,402017..>402128))	Acanthamoeba castellanii str. Neff	14913510
ACA1_092780	mRNA	ACA1_092780	NW_004457313.1	402376	403657	R	ACA1_092780	complement(join(<402376..402690,402764..402876,403045..>403657))	Acanthamoeba castellanii str. Neff	14913511
ACA1_092790	mRNA	ACA1_092790	NW_004457313.1	404144	405810	R	ACA1_092790	complement(join(<404144..404227,404281..404343,404404..404449,404545..404720,404784..404881,404944..405065,405103..405167,405267..405363,405463..405578,405670..>405810))	Acanthamoeba castellanii str. Neff	14913301
ACA1_092800	mRNA	ACA1_092800	NW_004457313.1	405948	408726	R	ACA1_092800	complement(join(<405948..406076,406150..406262,406369..406495,406588..406708,406788..406888,406979..407393,407488..407604,407693..408225,408337..408422,408606..>408726))	Acanthamoeba castellanii str. Neff	14913302
ACA1_092810	mRNA	ACA1_092810	NW_004457313.1	409004	410600	D	ACA1_092810	join(<409004..409102,409178..409239,409455..410212,410401..410451,410551..>410600)	Acanthamoeba castellanii str. Neff	14913144
ACA1_092820	mRNA	ACA1_092820	NW_004457313.1	411334	415575	R	ACA1_092820	complement(join(<411334..411413,411561..411653,411810..411903,411985..412085,412168..412240,412340..412528,412675..412755,412888..412933,412999..413115,413225..413278,413385..413506,413600..413683,413750..413914,414030..414160,414273..414341,414457..414550,414636..414756,414854..415052,415084..415238,415303..415327,415398..>415575))	Acanthamoeba castellanii str. Neff	14913145
ACA1_092830	mRNA	ACA1_092830	NW_004457313.1	415734	417611	D	ACA1_092830	join(<415734..415967,416042..416125,416203..416353,416432..416595,416662..416763,416838..416898,416981..417063,417159..417400,417446..>417611)	Acanthamoeba castellanii str. Neff	14913146
ACA1_092840	mRNA	ACA1_092840	NW_004457313.1	417784	418316	R	ACA1_092840	complement(join(<417784..417890,417979..418129,418266..>418316))	Acanthamoeba castellanii str. Neff	14913483
ACA1_092850	mRNA	ACA1_092850	NW_004457313.1	418624	421376	D	ACA1_092850	join(<418624..418773,418898..419150,419321..419454,419622..419720,419850..419936,420024..420209,420352..420430,420510..420677,420778..421217,421305..>421376)	Acanthamoeba castellanii str. Neff	14913443
ACA1_092860	mRNA	ACA1_092860	NW_004457313.1	421489	425550	R	ACA1_092860	complement(join(<421489..421630,421701..421820,421920..422047,422191..422297,422436..422610,422722..422933,423023..423245,423388..423503,423644..423880,423987..424371,424465..424689,424775..424828,424934..425067,425169..425244,425362..>425550))	Acanthamoeba castellanii str. Neff	14913444
ACA1_092870	mRNA	ACA1_092870	NW_004457313.1	425698	427032	R	ACA1_092870	complement(join(<425698..425824,425932..426095,426168..426276,426367..426595,426684..426736,426842..>427032))	Acanthamoeba castellanii str. Neff	14913445
ACA1_092880	mRNA	ACA1_092880	NW_004457313.1	427575	429742	D	ACA1_092880	join(<427575..428069,428319..428675,428756..428871,428958..429082,429162..429317,429411..429543,429610..>429742)	Acanthamoeba castellanii str. Neff	14913555
ACA1_092890	mRNA	ACA1_092890	NW_004457313.1	430008	432248	D	ACA1_092890	join(<430008..430032,430320..430428,430578..430678,430822..430913,431058..431217,431322..431489,431606..431781,431940..>432248)	Acanthamoeba castellanii str. Neff	14913556
ACA1_092900	mRNA	ACA1_092900	NW_004457313.1	432402	434628	R	ACA1_092900	complement(join(<432402..432641,432747..432900,433006..433208,433306..433407,433533..433633,433715..433849,433991..434083,434349..434467,434591..>434628))	Acanthamoeba castellanii str. Neff	14913429
ACA1_092910	mRNA	ACA1_092910	NW_004457313.1	434726	435586	R	ACA1_092910	complement(join(<434726..434862,434954..435048,435195..>435586))	Acanthamoeba castellanii str. Neff	14913430
ACA1_092930	mRNA	ACA1_092930	NW_004457313.1	440428	443226	R	ACA1_092930	complement(join(<440428..440581,440680..440767,440854..440926,441010..441206,441311..441410,441494..441603,441728..441815,442008..442047,442157..442294,442404..442474,442542..442781,442882..>443226))	Acanthamoeba castellanii str. Neff	14913218
ACA1_092940	mRNA	ACA1_092940	NW_004457313.1	443548	443811	D	ACA1_092940	join(<443548..443699,443769..>443811)	Acanthamoeba castellanii str. Neff	14913219
ACA1_092950	mRNA	ACA1_092950	NW_004457313.1	443979	445764	R	ACA1_092950	complement(join(<443979..444219,444350..444443,444521..444646,444723..>445764))	Acanthamoeba castellanii str. Neff	14913220
ACA1_092960	mRNA	ACA1_092960	NW_004457313.1	446534	448051	R	ACA1_092960	complement(<446534..>448051)	Acanthamoeba castellanii str. Neff	14913657
ACA1_092970	mRNA	ACA1_092970	NW_004457313.1	448885	449664	R	ACA1_092970	complement(join(<448885..449217,449298..449368,449438..449519,449596..>449664))	Acanthamoeba castellanii str. Neff	14913658
ACA1_092980	mRNA	ACA1_092980	NW_004457313.1	450195	452638	D	ACA1_092980	join(<450195..450470,450667..450865,450989..451065,451169..451273,451410..451480,451586..451667,451783..451905,452027..>452638)	Acanthamoeba castellanii str. Neff	14913659
ACA1_092990	mRNA	ACA1_092990	NW_004457313.1	452853	453573	R	ACA1_092990	complement(join(<452853..453106,453225..>453573))	Acanthamoeba castellanii str. Neff	14913459
ACA1_093000	mRNA	ACA1_093000	NW_004457313.1	455343	456733	D	ACA1_093000	join(<455343..455802,456261..456418,456587..>456733)	Acanthamoeba castellanii str. Neff	14913460
ACA1_093010	mRNA	ACA1_093010	NW_004457313.1	457122	458332	D	ACA1_093010	join(<457122..457472,457541..457718,457800..>458332)	Acanthamoeba castellanii str. Neff	14913461
ACA1_093020	mRNA	ACA1_093020	NW_004457313.1	459470	461733	R	ACA1_093020	complement(join(<459470..459715,459803..460070,460124..460260,460350..460436,460511..460692,460789..460820,460875..461000,461088..461320,461436..461568,461681..>461733))	Acanthamoeba castellanii str. Neff	14913462
ACA1_093030	mRNA	ACA1_093030	NW_004457313.1	461865	465554	D	ACA1_093030	join(<461865..461879,461933..462045,462134..462173,462322..462426,462537..462687,462794..462909,463023..463112,463200..463284,463356..463464,463536..463614,463677..463827,463893..463978,464082..464189,464271..464353,464434..464533,464618..464755,464852..464941,465156..465233,465303..465380,465435..>465554)	Acanthamoeba castellanii str. Neff	14913463
ACA1_093040	mRNA	ACA1_093040	NW_004457313.1	466418	466953	D	ACA1_093040	join(<466418..466610,466668..466778,466835..>466953)	Acanthamoeba castellanii str. Neff	14913464
ACA1_093050	mRNA	ACA1_093050	NW_004457313.1	467139	469595	D	ACA1_093050	join(<467139..467164,467248..467314,467402..467545,467625..467829,467928..468115,468217..468357,468462..468685,468765..468858,468957..468978,469045..469157,469236..469391,469488..>469595)	Acanthamoeba castellanii str. Neff	14913385
ACA1_093060	mRNA	ACA1_093060	NW_004457313.1	470053	472179	D	ACA1_093060	join(<470053..470684,470772..470849,470991..471086,471175..471299,471415..471487,471593..471750,471845..>472179)	Acanthamoeba castellanii str. Neff	14913386
ACA1_093070	mRNA	ACA1_093070	NW_004457313.1	473101	475212	D	ACA1_093070	join(<473101..473858,473941..474061,474196..474396,474469..>475212)	Acanthamoeba castellanii str. Neff	14913236
ACA1_093080	mRNA	ACA1_093080	NW_004457313.1	476029	477672	D	ACA1_093080	join(<476029..476148,476170..476666,476750..476870,476961..477161,477262..>477672)	Acanthamoeba castellanii str. Neff	14913237
ACA1_093090	mRNA	ACA1_093090	NW_004457313.1	478035	479616	D	ACA1_093090	join(<478035..478086,478253..478331,478398..478575,478663..478761,478848..478957,479031..479107,479183..479268,479352..479423,479521..>479616)	Acanthamoeba castellanii str. Neff	14913238
ACA1_093100	mRNA	ACA1_093100	NW_004457313.1	479681	481195	R	ACA1_093100	complement(<479681..>481195)	Acanthamoeba castellanii str. Neff	14913469
ACA1_093110	mRNA	ACA1_093110	NW_004457313.1	481488	483190	D	ACA1_093110	join(<481488..481557,481630..481691,481846..481958,482029..482209,482303..482401,482465..482574,482666..482742,482802..482884,482949..483020,483098..>483190)	Acanthamoeba castellanii str. Neff	14913470
ACA1_093130	mRNA	ACA1_093130	NW_004457313.1	489333	491355	D	ACA1_093130	join(<489333..489565,489719..489838,489932..490114,490226..490430,490687..490860,490954..491094,491194..>491355)	Acanthamoeba castellanii str. Neff	14913578
ACA1_093140	mRNA	ACA1_093140	NW_004457313.1	491463	493380	R	ACA1_093140	complement(join(<491463..491858,491930..492039,492121..492347,492554..492626,492702..>493380))	Acanthamoeba castellanii str. Neff	14913579
ACA1_093150	mRNA	ACA1_093150	NW_004457313.1	494170	497372	D	ACA1_093150	join(<494170..494241,494360..494460,494631..494706,494789..495041,495123..495222,495340..495607,495697..496119,496207..496303,496410..496535,496629..496764,496874..497025,497107..497234,497325..>497372)	Acanthamoeba castellanii str. Neff	14913580
ACA1_093160	mRNA	ACA1_093160	NW_004457313.1	497571	499658	R	ACA1_093160	complement(join(<497571..497770,497891..498008,498122..498254,498373..498534,498635..498750,498825..498911,499012..499185,499539..>499658))	Acanthamoeba castellanii str. Neff	14913623
ACA1_093170	mRNA	ACA1_093170	NW_004457313.1	499998	501670	D	ACA1_093170	join(<499998..500197,500317..500465,500577..500708,500769..500921,500993..501151,501261..501425,501504..>501670)	Acanthamoeba castellanii str. Neff	14913624
ACA1_093180	mRNA	ACA1_093180	NW_004457313.1	504164	507504	R	ACA1_093180	complement(join(<504164..504562,504858..505080,505171..505348,505428..505547,505642..505687,505792..505854,505910..506399,506543..506666,506756..506905,507012..>507504))	Acanthamoeba castellanii str. Neff	14913473
ACA1_093290	mRNA	ACA1_093290	NW_004457313.1	507657	510525	R	ACA1_093290	complement(join(<507657..507741,507812..507955,508055..508137,508204..508308,508410..508590,508664..508734,508820..509008,509154..509306,509397..509462,509626..509712,509984..510070,510445..>510525))	Acanthamoeba castellanii str. Neff	14913474
ACA1_093300	mRNA	ACA1_093300	NW_004457313.1	510828	514660	D	ACA1_093300	join(<510828..511857,512003..512091,512222..512299,512362..512417,512490..512672,512765..512893,512927..513041,513160..513231,513315..513414,513654..513767,513883..513957,514030..514167,514290..514444,514526..>514660)	Acanthamoeba castellanii str. Neff	14913427
ACA1_093310	mRNA	ACA1_093310	NW_004457313.1	514719	516198	D	ACA1_093310	join(<514719..514810,514936..515030,515149..515213,515303..515393,515519..515543,515615..515729,515800..515935,516062..>516198)	Acanthamoeba castellanii str. Neff	14913428
ACA1_093320	mRNA	ACA1_093320	NW_004457313.1	516527	516841	D	ACA1_093320	join(<516527..516560,516636..>516841)	Acanthamoeba castellanii str. Neff	14913522
ACA1_093330	mRNA	ACA1_093330	NW_004457313.1	516939	518402	R	ACA1_093330	complement(join(<516939..517201,517344..517412,517499..517565,517646..517708,517821..517870,517961..518029,518102..518200,518375..>518402))	Acanthamoeba castellanii str. Neff	14913523
ACA1_093340	mRNA	ACA1_093340	NW_004457313.1	518839	520380	R	ACA1_093340	complement(join(<518839..519145,519230..519642,519824..519995,520172..>520380))	Acanthamoeba castellanii str. Neff	14913524
ACA1_093350	mRNA	ACA1_093350	NW_004457313.1	521368	526561	D	ACA1_093350	join(<521368..521517,521670..522030,522153..522211,522307..522586,522678..522873,522944..523082,523182..523311,523429..523539,523622..523677,523771..523858,523985..524273,524361..524534,524629..524765,524831..524906,525081..525258,525364..525501,525580..525658,525822..525934,526040..526288,526400..>526561)	Acanthamoeba castellanii str. Neff	14913360
ACA1_093360	mRNA	ACA1_093360	NW_004457313.1	527266	528108	D	ACA1_093360	join(<527266..527495,527587..527723,527798..>528108)	Acanthamoeba castellanii str. Neff	14913361
ACA1_093370	mRNA	ACA1_093370	NW_004457313.1	528202	530925	R	ACA1_093370	complement(join(<528202..528255,528380..528601,528736..528872,528967..529008,529067..529206,529323..529399,529501..529571,529632..529776,529889..529977,530075..530135,530219..530316,530440..530549,530687..530757,530842..>530925))	Acanthamoeba castellanii str. Neff	14913575
ACA1_093380	mRNA	ACA1_093380	NW_004457313.1	531153	531897	R	ACA1_093380	complement(join(<531153..531292,531382..531623,531764..>531897))	Acanthamoeba castellanii str. Neff	14913576
ACA1_093390	mRNA	ACA1_093390	NW_004457313.1	531995	534115	R	ACA1_093390	complement(join(<531995..532389,532450..532591,532756..532941,533108..533232,533346..533422,533524..533573,533654..533860,533945..534005,534054..>534115))	Acanthamoeba castellanii str. Neff	14913371
ACA1_093400	mRNA	ACA1_093400	NW_004457313.1	534276	537393	R	ACA1_093400	complement(join(<534276..534386,534463..534561,534660..534718,534841..535018,535155..535267,535355..535421,535515..535676,535839..535951,536054..536131,536260..536353,536424..536498,536845..536908,537098..537195,537277..>537393))	Acanthamoeba castellanii str. Neff	14913372
ACA1_093410	mRNA	ACA1_093410	NW_004457313.1	537853	542082	D	ACA1_093410	join(<537853..537953,538105..540138,540273..540381,540495..540567,540731..540804,540977..541491,541641..541750,541952..>542082)	Acanthamoeba castellanii str. Neff	14913373
ACA1_093420	mRNA	ACA1_093420	NW_004457313.1	542163	545604	R	ACA1_093420	complement(join(<542163..542358,542477..542639,542781..543087,543217..543305,543390..544080,544212..544305,544516..544569,544841..544914,545027..545122,545368..>545604))	Acanthamoeba castellanii str. Neff	14913309
ACA1_093430	mRNA	ACA1_093430	NW_004457313.1	545891	546473	R	ACA1_093430	complement(join(<545891..546007,546086..546251,546352..>546473))	Acanthamoeba castellanii str. Neff	14913310
ACA1_093440	mRNA	ACA1_093440	NW_004457313.1	546573	548019	R	ACA1_093440	complement(join(<546573..546716,546809..546902,546986..547146,547232..547323,547439..547600,547747..547855,547972..>548019))	Acanthamoeba castellanii str. Neff	14913129
ACA1_093450	mRNA	ACA1_093450	NW_004457313.1	548093	551103	D	ACA1_093450	join(<548093..548445,548559..548632,548712..548789,548942..549083,549184..549250,549375..549402,549488..549637,549769..549878,549950..550027,550154..550206,550386..>551103)	Acanthamoeba castellanii str. Neff	14913130
ACA1_093460	mRNA	ACA1_093460	NW_004457313.1	551191	553161	R	ACA1_093460	complement(join(<551191..551430,551523..551607,551717..551867,551959..552054,552292..552346,552434..552575,552675..552804,553014..>553161))	Acanthamoeba castellanii str. Neff	14913131
ACA1_093470	mRNA	ACA1_093470	NW_004457313.1	553314	554412	D	ACA1_093470	join(<553314..553930,553951..554122,554293..>554412)	Acanthamoeba castellanii str. Neff	14913106
ACA1_093480	mRNA	ACA1_093480	NW_004457313.1	556064	558072	D	ACA1_093480	join(<556064..557280,557399..557508,557635..557711,557803..>558072)	Acanthamoeba castellanii str. Neff	14913107
ACA1_093490	mRNA	ACA1_093490	NW_004457313.1	558449	560095	D	ACA1_093490	join(<558449..558471,558553..558620,558694..558740,558824..558910,559007..559123,559177..559844,559936..>560095)	Acanthamoeba castellanii str. Neff	14913321
ACA1_093500	mRNA	ACA1_093500	NW_004457313.1	560352	562151	R	ACA1_093500	complement(join(<560352..561126,561241..>562151))	Acanthamoeba castellanii str. Neff	14913322
ACA1_093510	mRNA	ACA1_093510	NW_004457313.1	562299	565000	D	ACA1_093510	join(<562299..563150,563302..563379,563500..563609,563722..563830,563914..563984,564170..564236,564319..564456,564593..564747,564838..>565000)	Acanthamoeba castellanii str. Neff	14913323
ACA1_093520	mRNA	ACA1_093520	NW_004457313.1	565171	567344	R	ACA1_093520	complement(join(<565171..565473,565587..565691,565788..565876,565962..566113,566219..566350,566463..566728,566834..566932,567015..567176,567234..>567344))	Acanthamoeba castellanii str. Neff	14913104
ACA1_093530	mRNA	ACA1_093530	NW_004457313.1	567862	570481	D	ACA1_093530	join(<567862..568134,568246..568363,568465..568598,568699..568800,568875..569103,569167..569405,569500..569577,569681..569789,569886..570002,570138..570318,570397..>570481)	Acanthamoeba castellanii str. Neff	14913105
ACA1_093540	mRNA	ACA1_093540	NW_004457313.1	570822	576879	D	ACA1_093540	join(<570822..571304,571590..571958,572029..572444,572546..572870,572999..573205,573314..573653,573742..574103,574229..574449,574533..575223,575323..575688,575772..576080,576163..576417,576514..>576879)	Acanthamoeba castellanii str. Neff	14913211
ACA1_093550	mRNA	ACA1_093550	NW_004457313.1	576979	577361	R	ACA1_093550	complement(join(<576979..577082,577103..577221,577279..>577361))	Acanthamoeba castellanii str. Neff	14913212
ACA1_093560	mRNA	ACA1_093560	NW_004457313.1	577995	582203	R	ACA1_093560	complement(join(<577995..578082,578169..578296,578409..578505,578596..578656,578817..578904,579022..579066,579147..579208,579314..579398,579513..579623,579748..579818,579942..580017,580084..580167,580252..580314,580432..580581,580698..580753,580884..580989,581115..581191,581345..581459,581590..581635,581912..582038,582155..>582203))	Acanthamoeba castellanii str. Neff	14913162
ACA1_093570	mRNA	ACA1_093570	NW_004457313.1	582387	583638	R	ACA1_093570	complement(join(<582387..582645,582734..582855,582944..583138,583219..>583638))	Acanthamoeba castellanii str. Neff	14913163
ACA1_093580	mRNA	ACA1_093580	NW_004457313.1	584765	587349	D	ACA1_093580	join(<584765..585037,585185..586232,586338..586520,586598..586759,586839..587079,587151..>587349)	Acanthamoeba castellanii str. Neff	14913167
ACA1_093590	mRNA	ACA1_093590	NW_004457313.1	587637	588203	R	ACA1_093590	complement(<587637..>588203)	Acanthamoeba castellanii str. Neff	14913168
ACA1_093600	mRNA	ACA1_093600	NW_004457313.1	588585	591543	D	ACA1_093600	join(<588585..588761,588853..589119,589158..589645,589785..589975,589987..590452,590538..>591543)	Acanthamoeba castellanii str. Neff	14913169
ACA1_093610	mRNA	ACA1_093610	NW_004457313.1	591809	593272	R	ACA1_093610	complement(join(<591809..592240,592295..592434,592567..592710,592888..593064,593200..>593272))	Acanthamoeba castellanii str. Neff	14913170
ACA1_093620	mRNA	ACA1_093620	NW_004457313.1	593404	596515	D	ACA1_093620	join(<593404..593638,593700..593867,593939..594079,594170..594406,594495..594643,594736..596041,596112..596218,596322..596383,596473..>596515)	Acanthamoeba castellanii str. Neff	14913108
ACA1_093630	mRNA	ACA1_093630	NW_004457313.1	596747	599978	D	ACA1_093630	join(<596747..596803,596898..597704,597794..597844,597916..598048,598136..598242,598338..598414,598495..598607,598709..598899,598985..599049,599123..599253,599393..599468,599551..599669,599767..>599978)	Acanthamoeba castellanii str. Neff	14913109
ACA1_093640	mRNA	ACA1_093640	NW_004457313.1	600736	602897	R	ACA1_093640	complement(join(<600736..600850,600942..601030,601105..601262,601349..601461,601572..601809,601900..601990,602117..602293,602414..602536,602596..602722,602809..>602897))	Acanthamoeba castellanii str. Neff	14913179
ACA1_093650	mRNA	ACA1_093650	NW_004457313.1	605132	606409	R	ACA1_093650	complement(join(<605132..605260,605393..605499,606160..>606409))	Acanthamoeba castellanii str. Neff	14913180
ACA1_093660	mRNA	ACA1_093660	NW_004457313.1	607251	607639	R	ACA1_093660	complement(join(<607251..607357,607453..>607639))	Acanthamoeba castellanii str. Neff	14913183
ACA1_093670	mRNA	ACA1_093670	NW_004457313.1	608726	609146	R	ACA1_093670	complement(<608726..>609146)	Acanthamoeba castellanii str. Neff	14913184
ACA1_093680	mRNA	ACA1_093680	NW_004457313.1	609841	610667	R	ACA1_093680	complement(join(<609841..609920,610013..610109,610203..610342,610475..>610667))	Acanthamoeba castellanii str. Neff	14913185
ACA1_093690	mRNA	ACA1_093690	NW_004457313.1	614929	616317	D	ACA1_093690	<614929..>616317	Acanthamoeba castellanii str. Neff	14913186
ACA1_093700	mRNA	ACA1_093700	NW_004457313.1	616732	618141	D	ACA1_093700	join(<616732..616902,617007..617229,617304..617446,617535..617665,617778..617997,618082..>618141)	Acanthamoeba castellanii str. Neff	14913276
ACA1_093710	mRNA	ACA1_093710	NW_004457313.1	620180	622150	R	ACA1_093710	complement(join(<620180..620346,620426..620530,620612..620783,620855..620966,621040..621188,621263..621370,621433..621618,621713..>622150))	Acanthamoeba castellanii str. Neff	14913277
ACA1_093720	mRNA	ACA1_093720	NW_004457313.1	622925	625953	R	ACA1_093720	complement(join(<622925..623233,623331..623416,623600..623735,623945..624301,624623..624732,624808..624880,624967..625142,625216..625774,625840..>625953))	Acanthamoeba castellanii str. Neff	14913278
ACA1_093730	mRNA	ACA1_093730	NW_004457313.1	626414	626896	D	ACA1_093730	join(<626414..626434,626516..626643,626737..>626896)	Acanthamoeba castellanii str. Neff	14913134
ACA1_093740	mRNA	ACA1_093740	NW_004457313.1	627187	629660	R	ACA1_093740	complement(join(<627187..627411,627497..627619,627740..627880,628007..628200,628289..628418,628564..628674,628772..628845,628955..629200,629312..629546,629619..>629660))	Acanthamoeba castellanii str. Neff	14913135
ACA1_093760	mRNA	ACA1_093760	NW_004457313.1	639117	641403	D	ACA1_093760	join(<639117..639318,639424..639538,639626..639714,639800..639871,640021..640466,640588..640806,640909..641223,641380..>641403)	Acanthamoeba castellanii str. Neff	14913254
ACA1_093770	mRNA	ACA1_093770	NW_004457313.1	641664	643320	D	ACA1_093770	join(<641664..641811,641929..642070,642185..642232,642344..642426,642564..642729,642818..642884,643003..643106,643224..>643320)	Acanthamoeba castellanii str. Neff	14913255
ACA1_093780	mRNA	ACA1_093780	NW_004457313.1	643306	644115	R	ACA1_093780	complement(join(<643306..643994,644043..>644115))	Acanthamoeba castellanii str. Neff	14913256
ACA1_093790	mRNA	ACA1_093790	NW_004457313.1	644435	647444	D	ACA1_093790	join(<644435..644501,644597..644759,644871..645012,645114..645215,645301..645474,645633..646006,646105..646176,646271..646367,646644..646715,646789..646934,647019..647100,647158..647312,647438..>647444)	Acanthamoeba castellanii str. Neff	14913303
ACA1_093800	mRNA	ACA1_093800	NW_004457313.1	647259	648521	R	ACA1_093800	complement(join(<647259..647321,647446..647775,647917..648068,648196..648262,648468..>648521))	Acanthamoeba castellanii str. Neff	14913304
ACA1_093810	mRNA	ACA1_093810	NW_004457313.1	648851	649766	D	ACA1_093810	join(<648851..649006,649188..>649766)	Acanthamoeba castellanii str. Neff	14913432
ACA1_093820	mRNA	ACA1_093820	NW_004457313.1	650420	651880	R	ACA1_093820	complement(<650420..>651880)	Acanthamoeba castellanii str. Neff	14913433
ACA1_093830	mRNA	ACA1_093830	NW_004457313.1	652280	656972	R	ACA1_093830	complement(join(<652280..652459,652540..652720,652871..653032,653132..653327,653440..653631,653735..653939,654041..654345,654475..654798,654889..654987,655093..655360,655524..655609,655687..655821,655891..655944,656027..656226,656346..656415,656492..656564,656637..656812,656942..>656972))	Acanthamoeba castellanii str. Neff	14913434
ACA1_093840	mRNA	ACA1_093840	NW_004457313.1	657464	662981	D	ACA1_093840	join(<657464..657472,657543..657734,657836..657914,658020..658102,658198..658554,658657..658838,658900..659166,659261..659695,659786..659987,660103..660297,660389..660540,660667..660791,660906..660992,661148..661339,661434..661589,661701..662158,662258..662524,662629..662819,662897..>662981)	Acanthamoeba castellanii str. Neff	14913415
ACA1_093850	mRNA	ACA1_093850	NW_004457313.1	663573	665462	D	ACA1_093850	join(<663573..664083,664181..664285,664386..664666,664752..665186,665316..>665462)	Acanthamoeba castellanii str. Neff	14913416
ACA1_093860	mRNA	ACA1_093860	NW_004457313.1	665938	668079	D	ACA1_093860	join(<665938..666069,666297..666516,666646..666793,666893..667035,667201..667490,667617..667732,667866..667932,667960..>668079)	Acanthamoeba castellanii str. Neff	14913362
ACA1_093870	mRNA	ACA1_093870	NW_004457313.1	668190	669619	R	ACA1_093870	complement(join(<668190..668570,668666..669142,669209..>669619))	Acanthamoeba castellanii str. Neff	14913363
ACA1_093880	mRNA	ACA1_093880	NW_004457313.1	669810	672397	R	ACA1_093880	complement(join(<669810..669913,670031..670173,670252..670984,671079..671292,671415..671763,671841..671888,672127..672254,672332..>672397))	Acanthamoeba castellanii str. Neff	14913150
ACA1_093890	mRNA	ACA1_093890	NW_004457313.1	672574	674482	D	ACA1_093890	join(<672574..672873,672941..672976,673072..673272,673364..673672,673745..673932,674024..674204,674270..>674482)	Acanthamoeba castellanii str. Neff	14913151
ACA1_093900	mRNA	ACA1_093900	NW_004457313.1	674816	676165	D	ACA1_093900	join(<674816..674980,675042..675267,675340..675439,675456..675462,675499..675804,675875..675989,676059..>676165)	Acanthamoeba castellanii str. Neff	14913152
ACA1_093910	mRNA	ACA1_093910	NW_004457313.1	676366	678262	D	ACA1_093910	join(<676366..676466,676554..676779,676852..676989,677085..677168,677256..677426,677507..677773,677910..678068,678119..>678262)	Acanthamoeba castellanii str. Neff	14913244
ACA1_093920	mRNA	ACA1_093920	NW_004457313.1	678427	680409	D	ACA1_093920	join(<678427..678483,678576..678675,678749..678800,678968..678992,679095..679512,679598..679678,679773..679904,679998..680072,680177..680269,680351..>680409)	Acanthamoeba castellanii str. Neff	14913245
ACA1_093930	mRNA	ACA1_093930	NW_004457313.1	680740	682375	D	ACA1_093930	join(<680740..680979,681112..681180,681302..681380,681491..681498,681744..681787,681854..681941,682067..>682375)	Acanthamoeba castellanii str. Neff	14913389
ACA1_094040	mRNA	ACA1_094040	NW_004457313.1	682586	686417	D	ACA1_094040	join(<682586..682615,682782..683036,683117..683206,683335..683464,683631..683726,683828..683904,684027..684134,684232..684477,684582..684709,684788..684937,685014..685226,685303..685450,685545..685640,685747..685846,685924..686018,686096..686247,686324..>686417)	Acanthamoeba castellanii str. Neff	14913390
ACA1_094050	mRNA	ACA1_094050	NW_004457313.1	687009	687717	R	ACA1_094050	complement(join(<687009..687112,687210..687341,687452..687569,687649..>687717))	Acanthamoeba castellanii str. Neff	14913391
ACA1_094060	mRNA	ACA1_094060	NW_004457313.1	687926	689420	D	ACA1_094060	join(<687926..688210,688400..688472,688600..688716,688847..688954,689051..689149,689275..>689420)	Acanthamoeba castellanii str. Neff	14913377
ACA1_094070	mRNA	ACA1_094070	NW_004457313.1	689823	690386	D	ACA1_094070	join(<689823..689970,690109..>690386)	Acanthamoeba castellanii str. Neff	14913378
ACA1_094080	mRNA	ACA1_094080	NW_004457313.1	690514	691999	R	ACA1_094080	complement(join(<690514..690680,690765..691098,691205..691341,691451..691663,691741..>691999))	Acanthamoeba castellanii str. Neff	14913565
ACA1_094090	mRNA	ACA1_094090	NW_004457313.1	692197	693062	D	ACA1_094090	join(<692197..692509,692610..692689,692749..692936,693014..>693062)	Acanthamoeba castellanii str. Neff	14913566
ACA1_094100	mRNA	ACA1_094100	NW_004457313.1	693292	694038	D	ACA1_094100	join(<693292..693453,693530..693665,693727..693860,693922..>694038)	Acanthamoeba castellanii str. Neff	14913567
ACA1_094110	mRNA	ACA1_094110	NW_004457313.1	694195	695065	D	ACA1_094110	join(<694195..694330,694411..694480,694605..694650,694713..694781,694856..>695065)	Acanthamoeba castellanii str. Neff	14913392
ACA1_094120	mRNA	ACA1_094120	NW_004457313.1	695168	695837	R	ACA1_094120	complement(join(<695168..695284,695334..695506,695570..695643,695713..>695837))	Acanthamoeba castellanii str. Neff	14913393
ACA1_094130	mRNA	ACA1_094130	NW_004457313.1	696151	697340	R	ACA1_094130	complement(join(<696151..696374,696460..696553,696661..696757,696864..697017,697154..>697340))	Acanthamoeba castellanii str. Neff	14913394
ACA1_094140	mRNA	ACA1_094140	NW_004457313.1	697686	698202	R	ACA1_094140	complement(join(<697686..697900,698100..698157,698179..>698202))	Acanthamoeba castellanii str. Neff	14913314
ACA1_094150	mRNA	ACA1_094150	NW_004457313.1	700126	700703	R	ACA1_094150	complement(join(<700126..700277,700367..>700703))	Acanthamoeba castellanii str. Neff	14913315
ACA1_094160	mRNA	ACA1_094160	NW_004457313.1	701377	701840	R	ACA1_094160	complement(join(<701377..701506,701620..701699,701823..>701840))	Acanthamoeba castellanii str. Neff	14913316
ACA1_094170	mRNA	ACA1_094170	NW_004457313.1	702434	705016	R	ACA1_094170	complement(join(<702434..702561,702681..702823,702929..703151,703250..703373,703466..703665,703766..703871,703949..704075,704159..704252,704377..704563,704687..>705016))	Acanthamoeba castellanii str. Neff	14913206
ACA1_094180	mRNA	ACA1_094180	NW_004457313.1	705451	706692	D	ACA1_094180	join(<705451..705499,705626..705723,705810..705873,705981..706076,706254..706354,706441..>706692)	Acanthamoeba castellanii str. Neff	14913207
ACA1_094190	mRNA	ACA1_094190	NW_004457313.1	706963	708179	D	ACA1_094190	join(<706963..707045,707174..707262,707380..707693,707802..>708179)	Acanthamoeba castellanii str. Neff	14913208
ACA1_094200	mRNA	ACA1_094200	NW_004457313.1	708365	710038	R	ACA1_094200	complement(join(<708365..708399,708501..708677,708775..708889,708959..709089,709110..709218,709401..709453,709539..709665,709775..>710038))	Acanthamoeba castellanii str. Neff	14913327
ACA1_094210	mRNA	ACA1_094210	NW_004457313.1	710132	712070	R	ACA1_094210	complement(join(<710132..710257,710366..710529,710607..710740,710834..711270,711380..711422,711546..711784,711927..>712070))	Acanthamoeba castellanii str. Neff	14913328
ACA1_094230	mRNA	ACA1_094230	NW_004457313.1	717300	718146	D	ACA1_094230	join(<717300..717419,717510..717642,717753..717842,717953..>718146)	Acanthamoeba castellanii str. Neff	14913512
ACA1_094250	mRNA	ACA1_094250	NW_004457313.1	724717	731154	R	ACA1_094250	complement(join(<724717..724778,724905..724995,725121..725226,725307..725377,725431..725500,725599..725647,725721..725783,725855..725985,726057..726210,726317..726493,726613..726744,726861..726936,727044..727133,727226..727360,727681..727796,727878..728027,728138..728296,728467..728581,728722..728819,728978..729094,729124..729375,729526..729627,729713..729862,729963..730181,730374..730432,730545..730566,730669..730765,731071..>731154))	Acanthamoeba castellanii str. Neff	14913514
ACA1_094260	mRNA	ACA1_094260	NW_004457313.1	731483	738081	D	ACA1_094260	join(<731483..731495,731682..732478,732643..732807,732933..733152,733201..733236,733309..733379,733582..733667,733801..733902,734094..734139,734277..734406,734487..734548,734787..734855,734998..735128,735340..735415,735592..735606,735816..736022,736185..736358,736541..736603,736805..736982,737080..737205,737326..737451,737561..>738081)	Acanthamoeba castellanii str. Neff	14913515
ACA1_094280	mRNA	ACA1_094280	NW_004457313.1	740913	741566	D	ACA1_094280	join(<740913..740957,741037..741163,741233..741353,741467..>741566)	Acanthamoeba castellanii str. Neff	14913287
ACA1_094390	mRNA	ACA1_094390	NW_004457313.1	742214	746148	R	ACA1_094390	complement(join(<742214..742323,742373..742720,742776..742813,742875..742989,743062..743115,743307..743357,743688..743760,743819..743899,743954..744031,744109..744139,744195..744328,744391..744467,744647..744744,744775..744861,744919..744953,745012..745113,745297..745472,745751..745821,746075..>746148))	Acanthamoeba castellanii str. Neff	14913288
ACA1_094400	mRNA	ACA1_094400	NW_004457313.1	746480	753094	D	ACA1_094400	join(<746480..746582,746717..746775,746800..746947,747070..747504,747686..747849,747927..748102,748273..748423,748653..748759,748851..748948,749068..749223,749363..749502,749697..750215,750321..750455,750568..751006,751118..751293,751381..751535,751647..751770,752026..752039,752088..752160,752301..752425,752593..752758,752915..>753094)	Acanthamoeba castellanii str. Neff	14913289
ACA1_094510	mRNA	ACA1_094510	NW_004457313.1	754649	757321	D	ACA1_094510	join(<754649..754717,755439..755779,756011..756155,756313..756522,756698..756830,756902..757000,757029..>757321)	Acanthamoeba castellanii str. Neff	14913290
ACA1_094520	mRNA	ACA1_094520	NW_004457313.1	758221	761692	D	ACA1_094520	join(<758221..758423,758508..758658,758727..758859,758952..758998,759095..759966,759994..760052,760254..760379,760405..760852,760946..761020,761140..>761692)	Acanthamoeba castellanii str. Neff	14913413
ACA1_094530	mRNA	ACA1_094530	NW_004457313.1	763771	765672	R	ACA1_094530	complement(join(<763771..763984,764063..764177,764258..764345,764469..764531,764615..765085,765196..765360,765382..765430,765527..>765672))	Acanthamoeba castellanii str. Neff	14913414
ACA1_094540	mRNA	ACA1_094540	NW_004457313.1	765766	766522	D	ACA1_094540	join(<765766..766326,766445..>766522)	Acanthamoeba castellanii str. Neff	14913625
ACA1_094550	mRNA	ACA1_094550	NW_004457313.1	766911	768979	D	ACA1_094550	join(<766911..767167,767189..767452,767533..767726,767840..768237,768368..>768979)	Acanthamoeba castellanii str. Neff	14913626
ACA1_094560	mRNA	ACA1_094560	NW_004457313.1	769083	773634	R	ACA1_094560	complement(join(<769083..769205,769349..770152,770460..770561,770646..770961,771426..772326,772525..772603,772748..772911,772926..772933,773154..773253,773364..>773634))	Acanthamoeba castellanii str. Neff	14913627
ACA1_094570	mRNA	ACA1_094570	NW_004457313.1	774066	776105	D	ACA1_094570	join(<774066..774282,774431..774669,775295..775389,775502..775596,775712..775869,775944..>776105)	Acanthamoeba castellanii str. Neff	14913291
ACA1_094680	mRNA	ACA1_094680	NW_004457313.1	776190	776850	R	ACA1_094680	complement(join(<776190..776404,776468..776737,776814..>776850))	Acanthamoeba castellanii str. Neff	14913292
ACA1_094690	mRNA	ACA1_094690	NW_004457313.1	777323	785524	D	ACA1_094690	join(<777323..777497,777576..777726,777813..777926,778091..778274,778452..778664,778793..778868,779019..779083,779178..779228,779398..779712,779887..780054,780200..780307,780420..780565,780630..780766,780895..781031,782377..782429,782519..782588,782710..782784,782896..783006,783203..783355,783535..783744,783861..784073,784346..784591,784785..784964,785077..785169,785300..>785524)	Acanthamoeba castellanii str. Neff	14913293
ACA1_094900	mRNA	ACA1_094900	NW_004457313.1	785673	786978	D	ACA1_094900	join(<785673..786683,786799..>786978)	Acanthamoeba castellanii str. Neff	14913586
ACA1_094910	mRNA	ACA1_094910	NW_004457313.1	787227	789529	R	ACA1_094910	complement(join(<787227..787343,787461..787544,787605..787750,787963..788068,788241..788327,788510..788601,788758..789055,789265..789357,789446..>789529))	Acanthamoeba castellanii str. Neff	14913195
ACA1_094920	mRNA	ACA1_094920	NW_004457313.1	790104	795782	D	ACA1_094920	join(<790104..791279,791467..793194,793342..793439,793568..793739,793867..793986,794132..794266,794430..794873,794972..795136,795282..>795782)	Acanthamoeba castellanii str. Neff	14913196
ACA1_094930	mRNA	ACA1_094930	NW_004457313.1	796094	796890	D	ACA1_094930	join(<796094..796139,796238..796449,796515..796725,796790..>796890)	Acanthamoeba castellanii str. Neff	14913197
ACA1_094940	mRNA	ACA1_094940	NW_004457313.1	797011	798282	R	ACA1_094940	complement(join(<797011..797328,797422..797679,797798..797972,798076..798155,798226..>798282))	Acanthamoeba castellanii str. Neff	14913539
ACA1_094950	mRNA	ACA1_094950	NW_004457313.1	798480	802348	R	ACA1_094950	complement(join(<798480..798626,798736..798943,799056..799164,799274..799445,799566..799676,799766..800013,800165..800244,800370..800451,800565..800854,800955..801598,801875..>802348))	Acanthamoeba castellanii str. Neff	14913540
ACA1_095060	mRNA	ACA1_095060	NW_004457313.1	802549	804720	R	ACA1_095060	complement(join(<802549..802634,802715..802789,802897..803003,803066..803188,803292..803362,803473..803570,803660..803777,803883..804001,804097..804206,804359..804428,804666..>804720))	Acanthamoeba castellanii str. Neff	14913541
ACA1_095070	mRNA	ACA1_095070	NW_004457313.1	804902	807009	D	ACA1_095070	join(<804902..805055,805447..805783,806045..806426,806620..806721,806845..>807009)	Acanthamoeba castellanii str. Neff	14913347
ACA1_095080	mRNA	ACA1_095080	NW_004457313.1	807253	809006	R	ACA1_095080	complement(join(<807253..808434,808561..808860,808944..>809006))	Acanthamoeba castellanii str. Neff	14913348
ACA1_095090	mRNA	ACA1_095090	NW_004457313.1	809454	811677	D	ACA1_095090	join(<809454..809825,809907..810149,810264..810332,810473..810577,810681..810833,810987..811069,811146..811288,811403..>811677)	Acanthamoeba castellanii str. Neff	14913198
ACA1_095100	mRNA	ACA1_095100	NW_004457313.1	811826	813351	R	ACA1_095100	complement(join(<811826..812248,812427..812614,812740..812820,812956..813189,813300..>813351))	Acanthamoeba castellanii str. Neff	14913199
ACA1_095110	mRNA	ACA1_095110	NW_004457313.1	813519	814707	R	ACA1_095110	complement(join(<813519..814305,814463..>814707))	Acanthamoeba castellanii str. Neff	14913200
ACA1_095220	mRNA	ACA1_095220	NW_004457313.1	814885	817261	R	ACA1_095220	complement(join(<814885..814956,815007..815066,815223..815360,815478..815581,815677..815769,815892..815930,816166..816295,816400..816495,816561..816680,816763..816828,816929..>817261))	Acanthamoeba castellanii str. Neff	14913419
ACA1_095230	mRNA	ACA1_095230	NW_004457313.1	817677	820216	R	ACA1_095230	complement(join(<817677..817761,817887..817983,818086..818257,818359..818450,818599..818715,818913..819080,819183..819296,819376..819457,819545..819632,819796..819908,820046..>820216))	Acanthamoeba castellanii str. Neff	14913420
ACA1_095240	mRNA	ACA1_095240	NW_004457313.1	820578	822705	D	ACA1_095240	join(<820578..820694,820772..820801,820907..820946,821150..821612,821747..821931,822188..822349,822450..822560,822668..>822705)	Acanthamoeba castellanii str. Neff	14913421
ACA1_095250	mRNA	ACA1_095250	NW_004457313.1	823034	823695	D	ACA1_095250	join(<823034..823151,823328..>823695)	Acanthamoeba castellanii str. Neff	14913584
ACA1_095260	mRNA	ACA1_095260	NW_004457313.1	823857	825191	R	ACA1_095260	complement(join(<823857..824126,824216..824466,824552..824660,824751..824841,824962..825103,825179..>825191))	Acanthamoeba castellanii str. Neff	14913585
ACA1_095270	mRNA	ACA1_095270	NW_004457313.1	825445	826478	R	ACA1_095270	complement(join(<825445..825557,825679..825850,825964..826024,826116..826308,826379..>826478))	Acanthamoeba castellanii str. Neff	14913545
ACA1_095280	mRNA	ACA1_095280	NW_004457313.1	826727	827700	D	ACA1_095280	join(<826727..826981,827169..827420,827527..>827700)	Acanthamoeba castellanii str. Neff	14913546
ACA1_095290	mRNA	ACA1_095290	NW_004457313.1	828144	830391	D	ACA1_095290	join(<828144..828150,828187..828336,828461..828557,828719..828861,828941..828996,829128..829229,829503..829794,829885..829918,830019..830106,830209..>830391)	Acanthamoeba castellanii str. Neff	14913547
ACA1_095400	mRNA	ACA1_095400	NW_004457313.1	830482	833777	R	ACA1_095400	complement(join(<830482..830574,830685..830756,830840..831034,831266..831347,831439..831539,831635..831679,831788..831824,831982..832069,832213..832330,832364..832373,832427..832526,832614..832698,832793..832907,832995..833037,833160..833271,833395..833502,833715..>833777))	Acanthamoeba castellanii str. Neff	14913279
ACA1_095410	mRNA	ACA1_095410	NW_004457313.1	833918	835922	R	ACA1_095410	complement(join(<833918..833936,834169..834291,834367..834447,834556..834617,834736..834825,835022..835143,835281..835342,835443..835515,835581..835669,835885..>835922))	Acanthamoeba castellanii str. Neff	14913280
ACA1_095420	mRNA	ACA1_095420	NW_004457313.1	837488	839707	D	ACA1_095420	join(<837488..838912,839243..>839707)	Acanthamoeba castellanii str. Neff	14913501
ACA1_095530	mRNA	ACA1_095530	NW_004457313.1	839851	840777	D	ACA1_095530	join(<839851..840412,840502..840580,840666..>840777)	Acanthamoeba castellanii str. Neff	14913502
ACA1_095540	mRNA	ACA1_095540	NW_004457313.1	840909	842370	R	ACA1_095540	complement(join(<840909..841240,841311..841417,841491..841615,841690..842043,842149..>842370))	Acanthamoeba castellanii str. Neff	14913503
ACA1_095550	mRNA	ACA1_095550	NW_004457313.1	842795	847325	D	ACA1_095550	join(<842795..843061,843209..843313,843549..843737,843903..844035,844143..844276,844384..844545,844612..844679,844788..844916,845019..845213,845336..845487,845607..846028,846114..846146,846332..846574,846644..846824,847015..>847325)	Acanthamoeba castellanii str. Neff	14913484
ACA1_095560	mRNA	ACA1_095560	NW_004457313.1	847453	849412	D	ACA1_095560	join(<847453..847586,847718..847868,847956..848210,848335..848461,848581..848678,848776..848901,849020..849191,849270..>849412)	Acanthamoeba castellanii str. Neff	14913485
ACA1_095570	mRNA	ACA1_095570	NW_004457313.1	849555	851190	D	ACA1_095570	join(<849555..849561,849746..850124,850220..850586,850672..850754,850877..851037,851105..>851190)	Acanthamoeba castellanii str. Neff	14913250
ACA1_095580	mRNA	ACA1_095580	NW_004457313.1	851523	852898	D	ACA1_095580	join(<851523..851667,851860..852028,852163..>852898)	Acanthamoeba castellanii str. Neff	14913251
ACA1_095590	mRNA	ACA1_095590	NW_004457313.1	853220	855377	R	ACA1_095590	complement(join(<853220..853330,853399..853498,853577..853825,853917..854112,854254..854346,854473..854545,854670..854718,854845..854954,855066..>855377))	Acanthamoeba castellanii str. Neff	14913252
ACA1_095600	mRNA	ACA1_095600	NW_004457313.1	855628	856550	D	ACA1_095600	join(<855628..855844,855939..856039,856155..856287,856366..>856550)	Acanthamoeba castellanii str. Neff	14913631
ACA1_095610	mRNA	ACA1_095610	NW_004457313.1	856702	857729	D	ACA1_095610	join(<856702..856921,857044..857163,857315..857473,857542..>857729)	Acanthamoeba castellanii str. Neff	14913632
ACA1_095620	mRNA	ACA1_095620	NW_004457313.1	857776	864254	R	ACA1_095620	complement(join(<857776..857994,858079..858228,858337..858629,858707..858777,858872..858987,859018..859092,859224..859296,859411..859596,859668..859772,859893..860036,860244..860376,860469..860901,860988..861143,861215..861565,861669..862025,862105..862374,862479..862625,862773..862843,863100..863311,863468..863552,863672..863981,864225..>864254))	Acanthamoeba castellanii str. Neff	14913633
ACA1_095630	mRNA	ACA1_095630	NW_004457313.1	864707	868927	D	ACA1_095630	join(<864707..865274,865389..865516,865615..866026,866123..867220,867275..867429,867506..868454,868560..>868927)	Acanthamoeba castellanii str. Neff	14913614
ACA1_095640	mRNA	ACA1_095640	NW_004457313.1	869104	869574	R	ACA1_095640	complement(join(<869104..869211,869320..>869574))	Acanthamoeba castellanii str. Neff	14913294
ACA1_095650	mRNA	ACA1_095650	NW_004457313.1	869822	870106	R	ACA1_095650	complement(<869822..>870106)	Acanthamoeba castellanii str. Neff	14913295
ACA1_095660	mRNA	ACA1_095660	NW_004457313.1	870808	873119	D	ACA1_095660	join(<870808..871483,871570..871791,871896..872038,872127..872223,872346..872504,872601..872695,872859..872991,873070..>873119)	Acanthamoeba castellanii str. Neff	14913296
ACA1_095670	mRNA	ACA1_095670	NW_004457313.1	875791	878143	R	ACA1_095670	complement(join(<875791..875922,876008..876126,876213..876337,876427..876554,876613..876749,876832..876925,877001..877118,877214..877336,877424..877506,877605..877678,877783..877913,877980..>878143))	Acanthamoeba castellanii str. Neff	14913297
ACA1_095680	mRNA	ACA1_095680	NW_004457313.1	878645	881390	D	ACA1_095680	join(<878645..878735,878802..878936,879021..879073,879178..879241,879330..879467,879532..879593,879665..879926,879992..880066,880171..880247,880359..880496,880580..880731,880851..881004,881087..881189,881257..>881390)	Acanthamoeba castellanii str. Neff	14913497
ACA1_095690	mRNA	ACA1_095690	NW_004457313.1	882126	885977	D	ACA1_095690	join(<882126..882232,882294..882400,882488..882589,882689..882871,882946..883118,883194..883326,883430..883753,883838..883909,884021..884183,884260..884344,884415..884510,884581..884661,884697..884811,884908..885047,885143..885258,885336..885411,885503..885684,885773..>885977)	Acanthamoeba castellanii str. Neff	14913498
ACA1_095700	mRNA	ACA1_095700	NW_004457313.1	886114	890288	D	ACA1_095700	join(<886114..886262,886384..886553,886678..886862,887015..887141,887311..887396,887542..887669,887788..887877,888141..888201,888306..888526,888597..888892,888972..889048,889125..889266,889335..889486,889604..889709,889817..889881,889948..890031,890136..>890288)	Acanthamoeba castellanii str. Neff	14913194
ACA1_095710	mRNA	ACA1_095710	NW_004457313.1	890406	893270	R	ACA1_095710	complement(join(<890406..890570,890659..890875,890957..891141,891239..891436,891520..892260,892330..892430,892520..892730,892826..892906,892981..893113,893215..>893270))	Acanthamoeba castellanii str. Neff	14913345
ACA1_095720	mRNA	ACA1_095720	NW_004457313.1	893470	897449	D	ACA1_095720	join(<893470..893505,893791..893933,894013..894122,894235..894417,894503..894675,894765..894912,894990..895167,895188..895318,895385..895441,895550..895658,895817..895901,896013..896108,896196..896400,896472..896611,896757..896797,896895..897152,897260..>897449)	Acanthamoeba castellanii str. Neff	14913346
ACA1_095730	mRNA	ACA1_095730	NW_004457313.1	897574	898327	D	ACA1_095730	join(<897574..897698,897773..897863,897950..898055,898149..>898327)	Acanthamoeba castellanii str. Neff	14913417
ACA1_095740	mRNA	ACA1_095740	NW_004457313.1	898415	898926	R	ACA1_095740	complement(join(<898415..898549,898684..898773,898888..>898926))	Acanthamoeba castellanii str. Neff	14913418
ACA1_095750	mRNA	ACA1_095750	NW_004457313.1	899017	900262	R	ACA1_095750	complement(join(<899017..899118,899187..899294,899387..899439,899533..899672,899777..899821,899916..900046,900164..>900262))	Acanthamoeba castellanii str. Neff	14913601
ACA1_095760	mRNA	ACA1_095760	NW_004457313.1	900388	902021	D	ACA1_095760	join(<900388..900502,900590..900724,900804..900885,900971..901042,901551..901633,901727..901797,901875..>902021)	Acanthamoeba castellanii str. Neff	14913602
ACA1_095770	mRNA	ACA1_095770	NW_004457313.1	902058	904715	R	ACA1_095770	complement(join(<902058..902180,902246..902367,902550..902619,902692..902847,902949..903088,903171..903325,903487..903587,903677..903776,903867..903915,903994..904096,904231..904352,904424..>904715))	Acanthamoeba castellanii str. Neff	14913603
ACA1_095780	mRNA	ACA1_095780	NW_004457313.1	904832	907510	R	ACA1_095780	complement(join(<904832..904995,905446..905536,905622..905686,905911..905985,906065..906219,906324..906424,906505..906604,906730..906778,906873..906975,907045..907166,907264..>907510))	Acanthamoeba castellanii str. Neff	14913383
ACA1_095890	mRNA	ACA1_095890	NW_004457313.1	907584	908220	R	ACA1_095890	complement(join(<907584..907637,907828..>908220))	Acanthamoeba castellanii str. Neff	14913384
ACA1_095900	mRNA	ACA1_095900	NW_004457313.1	908400	909962	D	ACA1_095900	join(<908400..908522,908628..908716,908886..909246,909314..909683,909805..>909962)	Acanthamoeba castellanii str. Neff	14913213
ACA1_095910	mRNA	ACA1_095910	NW_004457313.1	910122	912089	D	ACA1_095910	<910122..>912089	Acanthamoeba castellanii str. Neff	14913214
ACA1_095920	mRNA	ACA1_095920	NW_004457313.1	912363	914034	D	ACA1_095920	join(<912363..912529,912685..912791,912871..912927,913023..913205,913303..913475,913609..>914034)	Acanthamoeba castellanii str. Neff	14913215
ACA1_095930	mRNA	ACA1_095930	NW_004457313.1	914054	915032	D	ACA1_095930	join(<914054..914165,914296..914370,914465..914666,914781..914865,914937..>915032)	Acanthamoeba castellanii str. Neff	14913525
ACA1_095940	mRNA	ACA1_095940	NW_004457313.1	915129	916535	D	ACA1_095940	join(<915129..915342,915457..915575,915674..915789,915859..915934,916036..916217,916355..>916535)	Acanthamoeba castellanii str. Neff	14913526
ACA1_095950	mRNA	ACA1_095950	NW_004457313.1	916704	918029	R	ACA1_095950	complement(<916704..>918029)	Acanthamoeba castellanii str. Neff	14913527
ACA1_095960	mRNA	ACA1_095960	NW_004457313.1	918169	922313	R	ACA1_095960	complement(join(<918169..918343,918452..918633,918740..918815,918982..919097,919197..919342,919452..919656,919769..919864,919936..920020,920106..920331,920465..920570,920671..920819,920924..921056,921202..921374,921464..921646,921732..921827,921960..922066,922177..>922313))	Acanthamoeba castellanii str. Neff	14913339
ACA1_095970	mRNA	ACA1_095970	NW_004457313.1	922648	924498	R	ACA1_095970	complement(join(<922648..922771,922879..923270,923347..923472,923540..923711,923806..923954,924025..924169,924248..>924498))	Acanthamoeba castellanii str. Neff	14913340
ACA1_095980	mRNA	ACA1_095980	NW_004457313.1	925341	926183	R	ACA1_095980	complement(join(<925341..925629,925711..925779,925857..925960,926091..>926183))	Acanthamoeba castellanii str. Neff	14913341
ACA1_095990	mRNA	ACA1_095990	NW_004457313.1	926638	933325	R	ACA1_095990	complement(join(<926638..927110,927366..928185,928197..928430,928527..928656,928779..928858,928929..929018,929138..929229,929293..929359,929452..929530,929584..929699,929825..929982,930099..930231,930370..930507,930605..930707,930839..930960,931055..931153,931236..931355,931419..931559,931651..931725,931798..932175,932282..>933325))	Acanthamoeba castellanii str. Neff	14913221
ACA1_096000	mRNA	ACA1_096000	NW_004457313.1	933928	936338	R	ACA1_096000	complement(join(<933928..934342,934443..934545,934610..934753,934865..934950,935047..935156,935253..935313,935424..935531,935562..935646,935779..935841,935952..936027,936095..936165,936227..>936338))	Acanthamoeba castellanii str. Neff	14913222
ACA1_096010	mRNA	ACA1_096010	NW_004457313.1	936662	937503	R	ACA1_096010	complement(join(<936662..936721,936834..936896,936977..937069,937195..937238,937301..937321,937422..>937503))	Acanthamoeba castellanii str. Neff	14913358
ACA1_096020	mRNA	ACA1_096020	NW_004457313.1	937819	938101	D	ACA1_096020	join(<937819..937972,938049..>938101)	Acanthamoeba castellanii str. Neff	14913359
ACA1_096030	mRNA	ACA1_096030	NW_004457313.1	938180	938892	R	ACA1_096030	complement(join(<938180..938238,938298..938445,938540..938627,938717..>938892))	Acanthamoeba castellanii str. Neff	14913424
ACA1_096040	mRNA	ACA1_096040	NW_004457313.1	939101	939422	R	ACA1_096040	complement(join(<939101..939222,939335..>939422))	Acanthamoeba castellanii str. Neff	14913425
ACA1_096150	mRNA	ACA1_096150	NW_004457313.1	940628	944184	D	ACA1_096150	join(<940628..941800,941923..941978,942086..942191,942295..942384,942543..942614,942781..942819,942919..943092,943192..943939,944057..>944184)	Acanthamoeba castellanii str. Neff	14913426
ACA1_096160	mRNA	ACA1_096160	NW_004457313.1	944544	950028	R	ACA1_096160	complement(join(<944544..945883,945995..946982,947076..947483,947647..947855,948079..948129,948603..948761,948837..949035,949278..949430,949849..>950028))	Acanthamoeba castellanii str. Neff	14913307
ACA1_096170	mRNA	ACA1_096170	NW_004457313.1	951262	955038	D	ACA1_096170	join(<951262..951542,951614..952106,952153..953248,953343..953611,953724..953886,953969..954165,954257..954382,954586..>955038)	Acanthamoeba castellanii str. Neff	14913308
ACA1_096180	mRNA	ACA1_096180	NW_004457313.1	956414	958795	D	ACA1_096180	join(<956414..956969,957566..957617,957725..957848,958106..>958795)	Acanthamoeba castellanii str. Neff	14913651
ACA1_096200	mRNA	ACA1_096200	NW_004457313.1	961251	963056	R	ACA1_096200	complement(join(<961251..962507,962567..962722,962787..962892,962959..>963056))	Acanthamoeba castellanii str. Neff	14913653
ACA1_096210	mRNA	ACA1_096210	NW_004457313.1	963290	963625	R	ACA1_096210	complement(<963290..>963625)	Acanthamoeba castellanii str. Neff	14913654
ACA1_096220	mRNA	ACA1_096220	NW_004457313.1	963794	966791	D	ACA1_096220	join(<963794..963883,963954..964272,964329..964711,964781..964899,964967..965053,965113..965210,965286..965352,965433..966008,966130..966215,966271..966354,966367..>966791)	Acanthamoeba castellanii str. Neff	14913611
ACA1_096230	mRNA	ACA1_096230	NW_004457313.1	967257	970495	D	ACA1_096230	join(<967257..967343,967470..967556,967650..967791,967899..967955,968030..968158,968247..968444,968555..968619,968693..968776,968867..968949,969109..969248,969323..969399,969486..969590,969662..969908,970005..970120,970246..970332,970403..>970495)	Acanthamoeba castellanii str. Neff	14913612
ACA1_096240	mRNA	ACA1_096240	NW_004457313.1	970572	971403	D	ACA1_096240	join(<970572..970706,970820..970922,970994..971050,971127..971214,971343..>971403)	Acanthamoeba castellanii str. Neff	14913613
ACA1_096250	mRNA	ACA1_096250	NW_004457313.1	972478	974168	D	ACA1_096250	join(<972478..973280,973370..>974168)	Acanthamoeba castellanii str. Neff	14913570
ACA1_096260	mRNA	ACA1_096260	NW_004457313.1	974218	976730	R	ACA1_096260	complement(join(<974218..975829,975911..976542,976683..>976730))	Acanthamoeba castellanii str. Neff	14913571
ACA1_096270	mRNA	ACA1_096270	NW_004457313.1	977113	977652	D	ACA1_096270	join(<977113..977296,977405..>977652)	Acanthamoeba castellanii str. Neff	14913113
ACA1_096280	mRNA	ACA1_096280	NW_004457313.1	977767	980361	R	ACA1_096280	complement(join(<977767..978483,978780..978872,978964..979130,979212..979385,979469..979849,980010..>980361))	Acanthamoeba castellanii str. Neff	14913114
ACA1_096290	mRNA	ACA1_096290	NW_004457313.1	980975	982144	R	ACA1_096290	complement(join(<980975..981086,981164..981316,981419..981556,981640..981721,981793..982020,982117..>982144))	Acanthamoeba castellanii str. Neff	14913115
ACA1_096300	mRNA	ACA1_096300	NW_004457313.1	982672	983469	D	ACA1_096300	<982672..>983469	Acanthamoeba castellanii str. Neff	14913283
ACA1_096310	mRNA	ACA1_096310	NW_004457313.1	983612	985626	R	ACA1_096310	complement(join(<983612..984475,984502..984882,984981..985436,985462..>985626))	Acanthamoeba castellanii str. Neff	14913284
ACA1_096320	mRNA	ACA1_096320	NW_004457313.1	986013	987832	D	ACA1_096320	join(<986013..986183,986352..986508,986584..986761,986845..986909,986982..987091,987176..987294,987364..987462,987586..987674,987741..>987832)	Acanthamoeba castellanii str. Neff	14913285
ACA1_096330	mRNA	ACA1_096330	NW_004457313.1	988231	990854	D	ACA1_096330	join(<988231..988356,988448..988596,988756..988889,988994..989068,989156..989218,989307..989431,989512..989656,989745..989883,989967..990083,990301..990430,990542..990633,990740..>990854)	Acanthamoeba castellanii str. Neff	14913286
ACA1_096340	mRNA	ACA1_096340	NW_004457313.1	991151	991456	R	ACA1_096340	complement(join(<991151..991349,991449..>991456))	Acanthamoeba castellanii str. Neff	14913138
ACA1_096350	mRNA	ACA1_096350	NW_004457313.1	992059	992424	D	ACA1_096350	join(<992059..992199,992275..>992424)	Acanthamoeba castellanii str. Neff	14913139
ACA1_096360	mRNA	ACA1_096360	NW_004457313.1	992657	998056	R	ACA1_096360	complement(join(<992657..992878,992997..993122,993235..993384,993497..993618,993742..993981,994069..994179,994300..994392,994529..994679,994786..995238,995333..995430,995529..995685,995775..995879,995970..996143,996245..996314,996400..996461,996541..996950,997297..997395,997514..997619,997702..997782,997848..997978,998038..>998056))	Acanthamoeba castellanii str. Neff	14913116
ACA1_096370	mRNA	ACA1_096370	NW_004457313.1	999407	1000660	D	ACA1_096370	<999407..>1000660	Acanthamoeba castellanii str. Neff	14913117
ACA1_096380	mRNA	ACA1_096380	NW_004457313.1	1000764	1001360	R	ACA1_096380	complement(<1000764..>1001360)	Acanthamoeba castellanii str. Neff	14913232
ACA1_096390	mRNA	ACA1_096390	NW_004457313.1	1002021	1003667	R	ACA1_096390	complement(join(<1002021..1002439,1002567..1002663,1002772..1003098,1003210..1003333,1003481..1003539,1003635..>1003667))	Acanthamoeba castellanii str. Neff	14913233
ACA1_096400	mRNA	ACA1_096400	NW_004457313.1	1004132	1005660	D	ACA1_096400	join(<1004132..1004286,1004404..1004534,1004609..1004659,1004735..1004832,1004907..1005006,1005064..1005120,1005221..1005348,1005420..1005516,1005575..>1005660)	Acanthamoeba castellanii str. Neff	14913234
ACA1_096410	mRNA	ACA1_096410	NW_004457313.1	1005725	1006840	R	ACA1_096410	complement(join(<1005725..1005900,1005993..1006084,1006175..1006319,1006403..1006556,1006628..>1006840))	Acanthamoeba castellanii str. Neff	14913235
ACA1_096420	mRNA	ACA1_096420	NW_004457313.1	1007376	1008290	R	ACA1_096420	complement(join(<1007376..1007572,1007658..1007810,1007895..1008014,1008095..>1008290))	Acanthamoeba castellanii str. Neff	14913643
ACA1_096430	mRNA	ACA1_096430	NW_004457313.1	1008619	1010619	R	ACA1_096430	complement(join(<1008619..1008993,1009051..1009160,1009263..1009379,1009517..1009673,1009758..1009859,1009922..1010117,1010306..1010361,1010590..>1010619))	Acanthamoeba castellanii str. Neff	14913644
ACA1_096440	mRNA	ACA1_096440	NW_004457313.1	1010754	1014663	D	ACA1_096440	join(<1010754..1010778,1011069..1011171,1011237..1011284,1011383..1011461,1011598..1011822,1011894..1011949,1012270..1012370,1012455..1012558,1012700..1012763,1012877..1012999,1013091..1013275,1013351..1013431,1013502..1013571,1013658..1013756,1013886..1013990,1014119..1014233,1014552..>1014663)	Acanthamoeba castellanii str. Neff	14913381
ACA1_096450	mRNA	ACA1_096450	NW_004457313.1	1015726	1016520	D	ACA1_096450	<1015726..>1016520	Acanthamoeba castellanii str. Neff	14913382
ACA1_096460	mRNA	ACA1_096460	NW_004457313.1	1017170	1019410	R	ACA1_096460	complement(join(<1017170..1017344,1017411..1017487,1017615..1017772,1017839..1017931,1017973..1018104,1018189..>1019410))	Acanthamoeba castellanii str. Neff	14913559
ACA1_096470	mRNA	ACA1_096470	NW_004457313.1	1019712	1022938	R	ACA1_096470	complement(join(<1019712..1020893,1020990..1021098,1021184..1021263,1021379..1021502,1021670..1021803,1021895..1022003,1022095..1022195,1022318..1022363,1022439..1022589,1022671..1022776,1022864..>1022938))	Acanthamoeba castellanii str. Neff	14913560
ACA1_096480	mRNA	ACA1_096480	NW_004457313.1	1024509	1026855	R	ACA1_096480	complement(join(<1024509..1024531,1024603..1024959,1025059..1025127,1025206..1025365,1025446..1025523,1025604..1025702,1025797..1025862,1025935..1026024,1026102..1026206,1026275..1026383,1026456..1026550,1026646..1026740,1026825..>1026855))	Acanthamoeba castellanii str. Neff	14913561
ACA1_096490	mRNA	ACA1_096490	NW_004457313.1	1027387	1028859	D	ACA1_096490	join(<1027387..1028141,1028245..1028307,1028385..1028508,1028617..>1028859)	Acanthamoeba castellanii str. Neff	14913224
ACA1_096500	mRNA	ACA1_096500	NW_004457313.1	1028997	1031165	R	ACA1_096500	complement(join(<1028997..1029598,1029711..1030592,1030681..1030799,1030927..>1031165))	Acanthamoeba castellanii str. Neff	14913225
ACA1_096510	mRNA	ACA1_096510	NW_004457313.1	1031834	1032114	R	ACA1_096510	complement(<1031834..>1032114)	Acanthamoeba castellanii str. Neff	14913465
ACA1_096520	mRNA	ACA1_096520	NW_004457313.1	1032292	1034852	R	ACA1_096520	complement(join(<1032292..1032830,1032917..1032991,1033147..1033373,1033468..1033555,1033633..1034256,1034329..1034447,1034506..>1034852))	Acanthamoeba castellanii str. Neff	14913466
ACA1_096530	mRNA	ACA1_096530	NW_004457313.1	1035339	1036724	D	ACA1_096530	join(<1035339..1035914,1035969..>1036724)	Acanthamoeba castellanii str. Neff	14913467
ACA1_096540	mRNA	ACA1_096540	NW_004457313.1	1036823	1039083	R	ACA1_096540	complement(join(<1036823..1037476,1037551..1037622,1037691..1037819,1037942..1038070,1038147..1038299,1038375..1038526,1038596..1038777,1038896..>1039083))	Acanthamoeba castellanii str. Neff	14913468
ACA1_096550	mRNA	ACA1_096550	NW_004457313.1	1039637	1042494	R	ACA1_096550	complement(join(<1039637..1041041,1041140..1041288,1041388..1041426,1041667..1041709,1041786..1041994,1042105..1042180,1042255..1042349,1042426..>1042494))	Acanthamoeba castellanii str. Neff	14913305
ACA1_096560	mRNA	ACA1_096560	NW_004457313.1	1042915	1045274	D	ACA1_096560	join(<1042915..1043304,1043449..1043538,1043669..1043788,1043893..1044006,1044120..1044228,1044310..1044430,1044541..1044649,1044753..1044857,1044965..1045048,1045128..>1045274)	Acanthamoeba castellanii str. Neff	14913306
ACA1_096580	mRNA	ACA1_096580	NW_004457313.1	1051471	1054474	D	ACA1_096580	join(<1051471..1051524,1051625..1051706,1051765..1051841,1051975..1052080,1052397..1052433,1052533..1052594,1052672..1052749,1052834..1052909,1052990..1053089,1053174..1053217,1053328..1053391,1053474..1053547,1053651..1053723,1053851..1053952,1054035..1054126,1054197..1054296,1054418..>1054474)	Acanthamoeba castellanii str. Neff	14913396
ACA1_096590	mRNA	ACA1_096590	NW_004457313.1	1054660	1055422	R	ACA1_096590	complement(join(<1054660..1054694,1054779..1054831,1054921..1055042,1055107..1055207,1055272..>1055422))	Acanthamoeba castellanii str. Neff	14913397
ACA1_096600	mRNA	ACA1_096600	NW_004457313.1	1056462	1061416	D	ACA1_096600	join(<1056462..1056559,1056701..1057755,1057843..1058057,1058119..1058449,1058538..1058657,1058760..1058941,1059065..1059243,1059346..1059470,1059551..1059731,1059852..1059953,1060073..1060267,1060361..1060452,1060558..1060613,1060688..1060902,1060986..1061136,1061219..>1061416)	Acanthamoeba castellanii str. Neff	14913142
ACA1_096610	mRNA	ACA1_096610	NW_004457313.1	1061926	1062531	R	ACA1_096610	complement(join(<1061926..1062120,1062274..1062405,1062484..>1062531))	Acanthamoeba castellanii str. Neff	14913143
ACA1_096620	mRNA	ACA1_096620	NW_004457313.1	1062923	1063681	R	ACA1_096620	complement(join(<1062923..1063088,1063195..1063532,1063619..>1063681))	Acanthamoeba castellanii str. Neff	14913489
ACA1_096630	mRNA	ACA1_096630	NW_004457313.1	1064400	1069934	D	ACA1_096630	join(<1064400..1064669,1064860..1064979,1065057..1065114,1065206..1065362,1065437..1065630,1065737..1065887,1065993..1066080,1066152..1066316,1066448..1066561,1066668..1067042,1067122..1067409,1067484..1067644,1067754..1069296,1069405..1069488,1069581..1069668,1069768..>1069934)	Acanthamoeba castellanii str. Neff	14913490
ACA1_096640	mRNA	ACA1_096640	NW_004457313.1	1070110	1071165	R	ACA1_096640	complement(join(<1070110..1070854,1070924..>1071165))	Acanthamoeba castellanii str. Neff	14913491
ACA1_096650	mRNA	ACA1_096650	NW_004457313.1	1071782	1072471	D	ACA1_096650	join(<1071782..1072216,1072244..>1072471)	Acanthamoeba castellanii str. Neff	14913492
ACA1_096660	mRNA	ACA1_096660	NW_004457313.1	1073411	1076758	R	ACA1_096660	complement(join(<1073411..1073561,1073661..1073789,1073891..1074571,1074798..1074872,1074957..1075584,1075699..>1076758))	Acanthamoeba castellanii str. Neff	14913493
ACA1_096670	mRNA	ACA1_096670	NW_004457313.1	1076955	1078420	R	ACA1_096670	complement(join(<1076955..1077150,1077211..1077407,1077498..1077610,1077707..1078072,1078143..1078241,1078318..>1078420))	Acanthamoeba castellanii str. Neff	14913494
ACA1_096680	mRNA	ACA1_096680	NW_004457313.1	1078919	1083036	D	ACA1_096680	join(<1078919..1078928,1079075..1079222,1079313..1079825,1079906..1080672,1080790..1081160,1081234..1081386,1081478..1081713,1081799..1081901,1082005..1082401,1082534..1082676,1082804..1082916,1083003..>1083036)	Acanthamoeba castellanii str. Neff	14913242
ACA1_096690	mRNA	ACA1_096690	NW_004457313.1	1083235	1083816	R	ACA1_096690	complement(<1083235..>1083816)	Acanthamoeba castellanii str. Neff	14913243
ACA1_096700	mRNA	ACA1_096700	NW_004457313.1	1083980	1087415	D	ACA1_096700	join(<1083980..1084506,1084592..1084849,1085112..1085222,1085355..1085418,1085557..1085641,1085749..1085892,1085979..1086110,1086193..1086269,1086382..1086488,1086573..1086633,1086738..1086837,1086912..1086972,1087076..>1087415)	Acanthamoeba castellanii str. Neff	14913164
ACA1_096710	mRNA	ACA1_096710	NW_004457313.1	1087586	1089489	R	ACA1_096710	complement(join(<1087586..1087984,1088100..1088231,1088312..1088373,1088420..1088497,1088623..1089285,1089390..>1089489))	Acanthamoeba castellanii str. Neff	14913165
ACA1_096720	mRNA	ACA1_096720	NW_004457313.1	1089813	1092292	R	ACA1_096720	complement(join(<1089813..1089964,1090053..1090226,1090320..1090430,1090514..1090674,1090763..1092235,1092252..>1092292))	Acanthamoeba castellanii str. Neff	14913166
ACA1_096730	mRNA	ACA1_096730	NW_004457313.1	1092732	1093685	D	ACA1_096730	join(<1092732..1092949,1093020..1093141,1093223..1093296,1093382..1093457,1093528..>1093685)	Acanthamoeba castellanii str. Neff	14913118
ACA1_096740	mRNA	ACA1_096740	NW_004457313.1	1095854	1096111	R	ACA1_096740	complement(join(<1095854..1096038,1096051..>1096111))	Acanthamoeba castellanii str. Neff	14913119
ACA1_096750	mRNA	ACA1_096750	NW_004457313.1	1096224	1097300	D	ACA1_096750	join(<1096224..1096434,1096585..>1097300)	Acanthamoeba castellanii str. Neff	14913153
ACA1_096760	mRNA	ACA1_096760	NW_004457313.1	1097466	1098485	D	ACA1_096760	join(<1097466..1097639,1097717..1097872,1097942..1097981,1098125..1098264,1098355..1098433,1098466..>1098485)	Acanthamoeba castellanii str. Neff	14913154
ACA1_096770	mRNA	ACA1_096770	NW_004457313.1	1098525	1099511	D	ACA1_096770	join(<1098525..1098578,1098682..1098784,1098874..1098949,1099057..1099178,1099262..1099343,1099409..>1099511)	Acanthamoeba castellanii str. Neff	14913155
ACA1_096790	mRNA	ACA1_096790	NW_004457313.1	1101515	1104332	D	ACA1_096790	join(<1101515..1101542,1101607..1101725,1101823..1101966,1102046..1102117,1102184..1102276,1102341..1102406,1102640..1102783,1102858..1102992,1103084..1103203,1103286..1103392,1103509..1103575,1103645..1103716,1103843..1103965,1104041..1104114,1104196..1104271,1104297..>1104332)	Acanthamoeba castellanii str. Neff	14913120
ACA1_096800	mRNA	ACA1_096800	NW_004457313.1	1104358	1105284	D	ACA1_096800	<1104358..>1105284	Acanthamoeba castellanii str. Neff	14913121
ACA1_096810	mRNA	ACA1_096810	NW_004457313.1	1105429	1107474	D	ACA1_096810	join(<1105429..1105605,1105695..1105820,1105925..1106022,1106139..1106284,1106426..1106492,1106597..1106724,1106806..1106882,1107047..1107164,1107293..>1107474)	Acanthamoeba castellanii str. Neff	14913122
ACA1_096820	mRNA	ACA1_096820	NW_004457313.1	1107655	1108958	R	ACA1_096820	complement(join(<1107655..1108122,1108226..1108374,1108495..1108663,1108765..1108840,1108903..>1108958))	Acanthamoeba castellanii str. Neff	14913226
ACA1_096830	mRNA	ACA1_096830	NW_004457313.1	1109796	1120365	D	ACA1_096830	join(<1109796..1109890,1109997..1110042,1110099..1110134,1110148..1110280,1110376..1110673,1110776..1110966,1111052..1111203,1111353..1111632,1111769..1111986,1112118..1112245,1112335..1112474,1112548..1112769,1112845..1112972,1113050..1113239,1113338..1113597,1113724..1113909,1113992..1114106,1114240..1114337,1114394..1114570,1114590..1114675,1114808..1114962,1115029..1115348,1115446..1115679,1115837..1115926,1116010..1116267,1116311..1116601,1116793..1116977,1117087..1117482,1117583..1117846,1117953..1118154,1118266..1118456,1118554..1118747,1118850..1119142,1119251..1119490,1119813..1119849,1119972..1120137,1120203..>1120365)	Acanthamoeba castellanii str. Neff	14913227
ACA1_096940	mRNA	ACA1_096940	NW_004457313.1	1121516	1122800	R	ACA1_096940	complement(join(<1121516..1122638,1122709..>1122800))	Acanthamoeba castellanii str. Neff	14913228
ACA1_096950	mRNA	ACA1_096950	NW_004457313.1	1123436	1124916	D	ACA1_096950	join(<1123436..1123502,1123576..1123676,1123719..1123884,1123968..1124050,1124175..1124313,1124427..1124544,1124625..>1124916)	Acanthamoeba castellanii str. Neff	14913410
ACA1_096960	mRNA	ACA1_096960	NW_004457313.1	1125250	1127124	R	ACA1_096960	complement(join(<1125250..1125310,1125357..1125652,1125747..1125875,1125957..1126138,1126264..1126926,1127022..>1127124))	Acanthamoeba castellanii str. Neff	14913411
ACA1_096970	mRNA	ACA1_096970	NW_004457313.1	1128197	1129593	R	ACA1_096970	complement(join(<1128197..1128349,1128474..1128642,1128707..1128852,1128975..1129053,1129142..1129328,1129422..>1129593))	Acanthamoeba castellanii str. Neff	14913412
ACA1_096980	mRNA	ACA1_096980	NW_004457313.1	1130161	1130829	R	ACA1_096980	complement(<1130161..>1130829)	Acanthamoeba castellanii str. Neff	14913374
ACA1_096990	mRNA	ACA1_096990	NW_004457313.1	1131688	1137761	D	ACA1_096990	join(<1131688..1131939,1132036..1132119,1132217..1132331,1132424..1132534,1132614..1132884,1132986..1133148,1133256..1133362,1133449..1133536,1133573..1133669,1133754..1134162,1134319..1134440,1134532..1134636,1134718..1134872,1134964..1135066,1135155..1135288,1135395..1135572,1135654..1135782,1135860..1135956,1136311..1136434,1136499..1136626,1136692..1136796,1136872..1136965,1137025..1137184,1137259..1137365,1137447..1137616,1137686..>1137761)	Acanthamoeba castellanii str. Neff	14913375
ACA1_097000	mRNA	ACA1_097000	NW_004457313.1	1138142	1139015	D	ACA1_097000	join(<1138142..1138337,1138414..1138649,1138719..>1139015)	Acanthamoeba castellanii str. Neff	14913376
ACA1_097010	mRNA	ACA1_097010	NW_004457313.1	1139224	1140470	R	ACA1_097010	complement(join(<1139224..1139390,1139468..1139638,1139706..1140031,1140097..1140367,1140452..>1140470))	Acanthamoeba castellanii str. Neff	14913216
ACA1_097020	mRNA	ACA1_097020	NW_004457313.1	1141114	1143637	R	ACA1_097020	complement(join(<1141114..1141247,1141332..1141974,1142060..1142164,1142250..1142372,1142504..1142683,1142780..1142972,1143056..1143407,1143475..>1143637))	Acanthamoeba castellanii str. Neff	14913217
ACA1_097030	mRNA	ACA1_097030	NW_004457313.1	1143902	1146720	R	ACA1_097030	complement(join(<1143902..1144045,1144132..1144212,1144310..1144440,1144513..1144699,1144778..1144859,1144987..1145107,1145194..1145529,1145609..1145707,1145785..1145895,1145997..1146081,1146133..1146310,1146389..1146519,1146622..>1146720))	Acanthamoeba castellanii str. Neff	14913281
ACA1_097040	mRNA	ACA1_097040	NW_004457313.1	1147050	1149278	R	ACA1_097040	complement(join(<1147050..1148213,1148287..1148394,1148429..1148792,1148977..>1149278))	Acanthamoeba castellanii str. Neff	14913282
ACA1_097050	mRNA	ACA1_097050	NW_004457313.1	1149443	1150252	D	ACA1_097050	join(<1149443..1149449,1149540..>1150252)	Acanthamoeba castellanii str. Neff	14913479
ACA1_097060	mRNA	ACA1_097060	NW_004457313.1	1150787	1151080	D	ACA1_097060	<1150787..>1151080	Acanthamoeba castellanii str. Neff	14913480
ACA1_097070	mRNA	ACA1_097070	NW_004457313.1	1151618	1153787	D	ACA1_097070	join(<1151618..1151675,1151721..1151947,1152031..1152175,1152415..1152758,1152837..1152935,1153061..1153166,1153267..1153340,1153450..1153530,1153614..>1153787)	Acanthamoeba castellanii str. Neff	14913481
ACA1_097080	mRNA	ACA1_097080	NW_004457313.1	1153993	1154907	R	ACA1_097080	complement(join(<1153993..1154171,1154292..1154493,1154580..1154778,1154888..>1154907))	Acanthamoeba castellanii str. Neff	14913482
ACA1_097090	mRNA	ACA1_097090	NW_004457313.1	1155461	1156709	R	ACA1_097090	complement(join(<1155461..1155607,1155717..1155798,1155911..1156122,1156206..1156371,1156528..>1156709))	Acanthamoeba castellanii str. Neff	14913187
ACA1_097100	mRNA	ACA1_097100	NW_004457313.1	1156936	1159039	R	ACA1_097100	complement(join(<1156936..1157332,1157428..1157600,1157681..1157815,1157887..1158066,1158244..1158434,1158521..1158662,1158728..>1159039))	Acanthamoeba castellanii str. Neff	14913188
ACA1_097110	mRNA	ACA1_097110	NW_004457313.1	1159138	1162279	R	ACA1_097110	complement(join(<1159138..1159312,1159414..1159687,1159784..1159887,1159965..1160075,1160141..1160242,1160320..1160530,1160624..1160691,1160754..1160854,1160970..1161158,1161234..1161290,1161368..1161529,1161564..1161910,1161985..1162117,1162157..>1162279))	Acanthamoeba castellanii str. Neff	14913147
ACA1_097120	mRNA	ACA1_097120	NW_004457313.1	1162427	1164467	R	ACA1_097120	complement(join(<1162427..1162534,1162613..1162713,1162850..1162937,1163014..1163156,1163299..1163541,1163694..1163837,1163995..1164258,1164362..>1164467))	Acanthamoeba castellanii str. Neff	14913148
ACA1_097130	mRNA	ACA1_097130	NW_004457313.1	1165083	1171477	D	ACA1_097130	join(<1165083..1165140,1165273..1165375,1165508..1165568,1165651..1165785,1165906..1166214,1166312..1166625,1166722..1167071,1167155..1167226,1167318..1167628,1167712..1167850,1167921..1168313,1168383..1168642,1168766..1168882,1168964..1169322,1169413..>1171477)	Acanthamoeba castellanii str. Neff	14913149
ACA1_097150	mRNA	ACA1_097150	NW_004457313.1	1172058	1173413	D	ACA1_097150	join(<1172058..1172776,1172877..1172987,1173239..>1173413)	Acanthamoeba castellanii str. Neff	14913246
ACA1_097160	mRNA	ACA1_097160	NW_004457313.1	1174159	1174851	R	ACA1_097160	complement(join(<1174159..1174264,1174347..1174543,1174609..>1174851))	Acanthamoeba castellanii str. Neff	14913190
ACA1_097170	mRNA	ACA1_097170	NW_004457313.1	1175169	1175919	D	ACA1_097170	join(<1175169..1175171,1175235..1175333,1175398..1175475,1175704..>1175919)	Acanthamoeba castellanii str. Neff	14913247
ACA1_097180	mRNA	ACA1_097180	NW_004457313.1	1176192	1180256	D	ACA1_097180	join(<1176192..1176455,1176570..1176686,1176756..1176805,1177096..1177228,1177450..1178616,1178678..1179496,1179606..>1180256)	Acanthamoeba castellanii str. Neff	14913248
ACA1_097190	mRNA	ACA1_097190	NW_004457313.1	1180401	1182937	R	ACA1_097190	complement(join(<1180401..1180754,1180821..1180960,1181061..1181289,1181401..1181572,1181697..1181893,1181992..1182101,1182240..1182307,1182397..1182612,1182714..>1182937))	Acanthamoeba castellanii str. Neff	14913249
ACA1_097200	mRNA	ACA1_097200	NW_004457313.1	1183193	1184440	D	ACA1_097200	join(<1183193..1183305,1183408..1183609,1183709..>1184440)	Acanthamoeba castellanii str. Neff	14913136
ACA1_097210	mRNA	ACA1_097210	NW_004457313.1	1184613	1185868	R	ACA1_097210	complement(join(<1184613..1184782,1184949..1185068,1185200..1185296,1185494..1185636,1185793..>1185868))	Acanthamoeba castellanii str. Neff	14913137
ACA1_097220	mRNA	ACA1_097220	NW_004457313.1	1188653	1189582	R	ACA1_097220	complement(<1188653..>1189582)	Acanthamoeba castellanii str. Neff	14913534
ACA1_097230	mRNA	ACA1_097230	NW_004457313.1	1190046	1190693	R	ACA1_097230	complement(join(<1190046..1190078,1190149..1190309,1190381..1190445,1190508..1190581,1190655..>1190693))	Acanthamoeba castellanii str. Neff	14913535
ACA1_097240	mRNA	ACA1_097240	NW_004457313.1	1191115	1192003	D	ACA1_097240	join(<1191115..1191500,1191623..1191755,1191965..>1192003)	Acanthamoeba castellanii str. Neff	14913536
ACA1_097250	mRNA	ACA1_097250	NW_004457313.1	1192354	1192899	D	ACA1_097250	join(<1192354..1192527,1192629..1192727,1192828..>1192899)	Acanthamoeba castellanii str. Neff	14913537
ACA1_097260	mRNA	ACA1_097260	NW_004457313.1	1192987	1199163	R	ACA1_097260	complement(join(<1192987..1193969,1194108..1195112,1195278..1195584,1195692..1195808,1195912..1196268,1196348..1196513,1196581..1196722,1196793..1197057,1197121..1197354,1197420..1197532,1197602..1197718,1197866..1197935,1198022..1198185,1198251..1198410,1198487..1198783,1198861..1198967,1199127..>1199163))	Acanthamoeba castellanii str. Neff	14913132
ACA1_097270	mRNA	ACA1_097270	NW_004457313.1	1199771	1205931	R	ACA1_097270	complement(join(<1199771..1201860,1201944..1202250,1202340..1203115,1203200..1203414,1203484..1203770,1203839..1203954,1204023..1204326,1204433..1204530,1204629..1204788,1204895..1205206,1205281..1205343,1205365..1205495,1205698..1205772,1205865..>1205931))	Acanthamoeba castellanii str. Neff	14913133
ACA1_097280	mRNA	ACA1_097280	NW_004457313.1	1206787	1209436	R	ACA1_097280	complement(join(<1206787..1206927,1206999..1207134,1207216..1207346,1207421..1207633,1207717..1207955,1208031..1208189,1208257..1208428,1208500..1208545,1208610..1208757,1208831..1208899,1208968..1209055,1209230..>1209436))	Acanthamoeba castellanii str. Neff	14913272
ACA1_097290	mRNA	ACA1_097290	NW_004457313.1	1209686	1210738	D	ACA1_097290	join(<1209686..1209828,1209900..1210270,1210476..1210554,1210630..>1210738)	Acanthamoeba castellanii str. Neff	14913273
ACA1_097300	mRNA	ACA1_097300	NW_004457313.1	1211883	1217832	D	ACA1_097300	join(<1211883..1211949,1212110..1212204,1212298..1212510,1212581..1212889,1213004..1213157,1213244..1213645,1213747..1213865,1213945..1214476,1214502..1214516,1214564..1215333,1215409..>1217832)	Acanthamoeba castellanii str. Neff	14913356
ACA1_097310	mRNA	ACA1_097310	NW_004457313.1	1218179	1218412	D	ACA1_097310	<1218179..>1218412	Acanthamoeba castellanii str. Neff	14913357
ACA1_097320	mRNA	ACA1_097320	NW_004457313.1	1218569	1219638	D	ACA1_097320	join(<1218569..1218677,1218775..1218877,1218969..1219050,1219118..1219184,1219258..1219334,1219402..>1219638)	Acanthamoeba castellanii str. Neff	14913528
ACA1_097330	mRNA	ACA1_097330	NW_004457313.1	1219756	1220874	D	ACA1_097330	join(<1219756..1219867,1219973..1220136,1220205..1220418,1220519..1220686,1220777..>1220874)	Acanthamoeba castellanii str. Neff	14913529
ACA1_097340	mRNA	ACA1_097340	NW_004457313.1	1221440	1222124	R	ACA1_097340	complement(join(<1221440..1221653,1221725..1221941,1222028..>1222124))	Acanthamoeba castellanii str. Neff	14913530
ACA1_097350	mRNA	ACA1_097350	NW_004457313.1	1222336	1225618	D	ACA1_097350	join(<1222336..1222435,1222510..1222604,1222730..1222849,1222983..1223198,1223270..1223322,1223404..1223597,1223693..1223849,1223925..1224093,1224155..1224317,1224431..1224501,1224577..1224632,1224712..1224951,1225020..1225083,1225199..1225332,1225432..>1225618)	Acanthamoeba castellanii str. Neff	14913269
ACA1_097360	mRNA	ACA1_097360	NW_004457313.1	1225771	1227098	D	ACA1_097360	join(<1225771..1225881,1225997..1226062,1226141..1226225,1226400..1226439,1226478..1226545,1226625..1226683,1226733..1226825,1226928..>1227098)	Acanthamoeba castellanii str. Neff	14913270
ACA1_097370	mRNA	ACA1_097370	NW_004457313.1	1227371	1228345	D	ACA1_097370	join(<1227371..1227442,1227687..1227734,1227789..1227846,1227949..1228217,1228268..>1228345)	Acanthamoeba castellanii str. Neff	14913271
ACA1_097380	mRNA	ACA1_097380	NW_004457313.1	1229081	1229973	R	ACA1_097380	complement(join(<1229081..1229122,1229155..1229292,1229363..1229578,1229662..>1229973))	Acanthamoeba castellanii str. Neff	14913171
ACA1_097390	mRNA	ACA1_097390	NW_004457313.1	1230074	1232357	D	ACA1_097390	join(<1230074..1230232,1230370..1230441,1230567..1230756,1230768..1230805,1230825..1231235,1231316..1231725,1231793..1231903,1231985..>1232357)	Acanthamoeba castellanii str. Neff	14913172
ACA1_097400	mRNA	ACA1_097400	NW_004457313.1	1232884	1235552	D	ACA1_097400	join(<1232884..1233418,1233492..1233664,1233736..1233811,1233907..1234280,1234373..1234525,1234591..1234675,1234770..1234946,1235028..1235103,1235204..1235312,1235406..>1235552)	Acanthamoeba castellanii str. Neff	14913173
ACA1_097410	mRNA	ACA1_097410	NW_004457313.1	1235604	1238604	D	ACA1_097410	join(<1235604..1235747,1235819..1236029,1236196..1236305,1236396..1236524,1236637..1236741,1236880..1237030,1237128..1237262,1237324..1237610,1237684..1237842,1237954..1238146,1238210..1238378,1238463..>1238604)	Acanthamoeba castellanii str. Neff	14913499
ACA1_097420	mRNA	ACA1_097420	NW_004457313.1	1238722	1243823	R	ACA1_097420	complement(join(<1238722..1238905,1238982..1239681,1239765..1240149,1240270..1241073,1241139..1241290,1241361..1241469,1241600..1241715,1241787..1241939,1241968..1242117,1242180..1242268,1242351..1242397,1242466..1242552,1242644..1242706,1242777..1242947,1243013..1243115,1243221..1243359,1243465..1243635,1243718..>1243823))	Acanthamoeba castellanii str. Neff	14913500
ACA1_097430	mRNA	ACA1_097430	NW_004457313.1	1243965	1245151	D	ACA1_097430	join(<1243965..1244178,1244320..1244463,1244565..1244828,1244910..1245000,1245073..>1245151)	Acanthamoeba castellanii str. Neff	14913557
ACA1_097440	mRNA	ACA1_097440	NW_004457313.1	1245312	1245713	D	ACA1_097440	join(<1245312..1245357,1245435..1245506,1245586..>1245713)	Acanthamoeba castellanii str. Neff	14913558
ACA1_097450	mRNA	ACA1_097450	NW_004457313.1	1246184	1247890	R	ACA1_097450	complement(join(<1246184..1246360,1246574..1246955,1247028..1247223,1247301..1247514,1247641..1247773,1247865..>1247890))	Acanthamoeba castellanii str. Neff	14913404
ACA1_097460	mRNA	ACA1_097460	NW_004457313.1	1248166	1249522	R	ACA1_097460	complement(join(<1248166..1248582,1248671..1248838,1248921..1249050,1249153..1249209,1249320..>1249522))	Acanthamoeba castellanii str. Neff	14913405
ACA1_097480	mRNA	ACA1_097480	NW_004457313.1	1251733	1253165	D	ACA1_097480	join(<1251733..1251805,1251878..1251921,1252012..1252045,1252149..1252206,1252295..1252386,1252456..1252599,1252683..1252791,1252867..1252964,1253023..>1253165)	Acanthamoeba castellanii str. Neff	14913505
ACA1_097490	mRNA	ACA1_097490	NW_004457313.1	1253392	1254709	R	ACA1_097490	complement(join(<1253392..1253825,1253923..>1254709))	Acanthamoeba castellanii str. Neff	14913506
ACA1_097500	mRNA	ACA1_097500	NW_004457313.1	1254984	1257898	D	ACA1_097500	join(<1254984..1255026,1255106..1255229,1255301..1255434,1255518..1255662,1255757..1255928,1255989..1256250,1256355..1256507,1256590..1256689,1256787..1256856,1256962..1257071,1257168..1257285,1257379..1257472,1257594..>1257898)	Acanthamoeba castellanii str. Neff	14913507
ACA1_097510	mRNA	ACA1_097510	NW_004457313.1	1259074	1265326	R	ACA1_097510	complement(join(<1259074..1260149,1260223..1261190,1261279..1261481,1261571..1261729,1261801..1261917,1262011..1262681,1262770..1263085,1263122..1263358,1263474..1263583,1263645..1264046,1264123..1264279,1264368..1264673,1264784..1264852,1264925..1264996,1265078..1265172,1265260..>1265326))	Acanthamoeba castellanii str. Neff	14913663
ACA1_097520	mRNA	ACA1_097520	NW_004457313.1	1266277	1267283	R	ACA1_097520	complement(join(<1266277..1266366,1266572..1266668,1266745..1266815,1266905..1267073,1267198..>1267283))	Acanthamoeba castellanii str. Neff	14913664
ACA1_097540	mRNA	ACA1_097540	NW_004457313.1	1274542	1279708	R	ACA1_097540	complement(join(<1274542..1274788,1274909..1276029,1276151..1276827,1276912..1277137,1277225..1277344,1277417..1277523,1277602..1279518,1279630..>1279708))	Acanthamoeba castellanii str. Neff	14913591
ACA1_097550	mRNA	ACA1_097550	NW_004457313.1	1280413	1281555	R	ACA1_097550	complement(<1280413..>1281555)	Acanthamoeba castellanii str. Neff	14913592
ACA1_097560	mRNA	ACA1_097560	NW_004457313.1	1281872	1283400	R	ACA1_097560	complement(join(<1281872..1281942,1282014..1282181,1282233..1282325,1282389..1282491,1282566..1282666,1282725..1282824,1282898..1283041,1283130..1283217,1283285..>1283400))	Acanthamoeba castellanii str. Neff	14913123
ACA1_097570	mRNA	ACA1_097570	NW_004457313.1	1283763	1287296	R	ACA1_097570	complement(join(<1283763..1283930,1284006..1284153,1284248..1284378,1284449..1284594,1284663..1284745,1284835..1285017,1285085..1285241,1285309..1285384,1285482..1285596,1285674..1285742,1285820..1285973,1286086..1286236,1286339..1286455,1286550..>1287296))	Acanthamoeba castellanii str. Neff	14913124
ACA1_097580	mRNA	ACA1_097580	NW_004457313.1	1287500	1288893	D	ACA1_097580	join(<1287500..1288129,1288242..1288452,1288526..1288615,1288697..>1288893)	Acanthamoeba castellanii str. Neff	14913125
ACA1_097590	mRNA	ACA1_097590	NW_004457313.1	1289044	1291996	R	ACA1_097590	complement(join(<1289044..1289172,1289326..1290263,1290337..1290770,1290854..1290908,1290981..1291251,1291385..1291437,1291513..1291615,1291819..1291900,1291983..>1291996))	Acanthamoeba castellanii str. Neff	14913312
ACA1_097600	mRNA	ACA1_097600	NW_004457313.1	1292558	1296888	D	ACA1_097600	join(<1292558..1292680,1292787..1292967,1293076..1293231,1293504..1293625,1293737..1295170,1295295..1295791,1295874..>1296888)	Acanthamoeba castellanii str. Neff	14913313
ACA1_097610	mRNA	ACA1_097610	NW_004457313.1	1297318	1297803	D	ACA1_097610	join(<1297318..1297431,1297458..1297497,1297625..>1297803)	Acanthamoeba castellanii str. Neff	14913598
ACA1_097620	mRNA	ACA1_097620	NW_004457313.1	1297965	1300294	R	ACA1_097620	complement(join(<1297965..1298071,1298149..1298297,1298349..1298532,1298634..1299116,1299203..1299720,1299828..1299952,1300097..>1300294))	Acanthamoeba castellanii str. Neff	14913599
ACA1_097630	mRNA	ACA1_097630	NW_004457313.1	1300400	1302237	D	ACA1_097630	join(<1300400..1300436,1300725..1301394,1301490..1301583,1301690..1301762,1301859..1301974,1302076..>1302237)	Acanthamoeba castellanii str. Neff	14913600
ACA1_097640	mRNA	ACA1_097640	NW_004457313.1	1302725	1305274	D	ACA1_097640	join(<1302725..1303039,1303074..1303259,1303274..1303348,1303444..1303621,1303761..1303982,1304096..1304418,1304522..1304981,1305058..1305224,1305245..>1305274)	Acanthamoeba castellanii str. Neff	14913203
ACA1_097650	mRNA	ACA1_097650	NW_004457313.1	1305421	1306085	R	ACA1_097650	complement(join(<1305421..1305822,1306023..>1306085))	Acanthamoeba castellanii str. Neff	14913204
ACA1_097660	mRNA	ACA1_097660	NW_004457313.1	1306437	1312889	R	ACA1_097660	complement(join(<1306437..1306677,1306773..1306838,1306939..1307056,1307140..1307191,1307346..1307590,1307678..1307874,1307980..1308074,1308144..1308544,1308611..1308700,1308807..1308957,1309054..1309166,1309301..1309529,1309605..1309801,1309895..1310067,1310211..1310259,1310304..1310476,1310553..1310683,1310770..1311201,1311279..1311368,1311456..1311503,1311653..1311739,1312239..1312325,1312767..>1312889))	Acanthamoeba castellanii str. Neff	14913205
ACA1_097670	mRNA	ACA1_097670	NW_004457313.1	1313678	1314821	D	ACA1_097670	join(<1313678..1314191,1314307..>1314821)	Acanthamoeba castellanii str. Neff	14913538
ACA1_097680	mRNA	ACA1_097680	NW_004457313.1	1315161	1315884	D	ACA1_097680	join(<1315161..1315277,1315348..>1315884)	Acanthamoeba castellanii str. Neff	14913542
ACA1_097690	mRNA	ACA1_097690	NW_004457313.1	1316153	1321820	D	ACA1_097690	join(<1316153..1316282,1316450..1316527,1316684..1316745,1316852..1316923,1316986..1317096,1317180..1317331,1317415..1317622,1317714..1317935,1318101..1318296,1318379..1318512,1318597..1318776,1318880..1319008,1319101..1319328,1319501..1319845,1319927..1320050,1320151..1320245,1320352..1320652,1320715..>1321820)	Acanthamoeba castellanii str. Neff	14913543
ACA1_097700	mRNA	ACA1_097700	NW_004457313.1	1322053	1323754	R	ACA1_097700	complement(join(<1322053..1322337,1322397..1322570,1322668..1322844,1322977..1323066,1323243..1323335,1323443..>1323754))	Acanthamoeba castellanii str. Neff	14913544
ACA1_097710	mRNA	ACA1_097710	NW_004457313.1	1324710	1325486	D	ACA1_097710	<1324710..>1325486	Acanthamoeba castellanii str. Neff	14913587
ACA1_097720	mRNA	ACA1_097720	NW_004457313.1	1325851	1327215	D	ACA1_097720	join(<1325851..1326216,1326295..1326447,1326573..1326852,1326926..>1327215)	Acanthamoeba castellanii str. Neff	14913588
ACA1_097730	mRNA	ACA1_097730	NW_004457313.1	1327367	1329471	R	ACA1_097730	complement(join(<1327367..1328424,1328559..1328707,1328795..1329061,1329167..>1329471))	Acanthamoeba castellanii str. Neff	14913589
ACA1_097740	mRNA	ACA1_097740	NW_004457313.1	1330210	1334600	D	ACA1_097740	join(<1330210..1330249,1330319..1330386,1330462..1330872,1330931..1330969,1331039..1331113,1331178..1331360,1331439..1331548,1331682..1331740,1331870..1332003,1332073..1332170,1332236..1332323,1332409..1332605,1332676..1332776,1332839..1333170,1333245..>1334600)	Acanthamoeba castellanii str. Neff	14913398
ACA1_097750	mRNA	ACA1_097750	NW_004457313.1	1334714	1336270	R	ACA1_097750	complement(join(<1334714..1334923,1335005..1335163,1335244..1335360,1335433..1335558,1335637..1335708,1335789..1335868,1335965..1336007,1336080..1336174,1336255..>1336270))	Acanthamoeba castellanii str. Neff	14913399
ACA1_097760	mRNA	ACA1_097760	NW_004457313.1	1336556	1337901	D	ACA1_097760	join(<1336556..1336638,1336699..1336897,1336962..1337026,1337104..1337184,1337261..1337782,1337832..>1337901)	Acanthamoeba castellanii str. Neff	14913400
ACA1_097770	mRNA	ACA1_097770	NW_004457313.1	1338228	1338442	D	ACA1_097770	join(<1338228..1338341,1338356..>1338442)	Acanthamoeba castellanii str. Neff	14913655
ACA1_097790	mRNA	ACA1_097790	NW_004457313.1	1339770	1343163	R	ACA1_097790	complement(join(<1339770..1339910,1339978..1340064,1340126..1340197,1340304..1340351,1340417..1341144,1341244..1341378,1341483..1341592,1341711..1341810,1341902..1342136,1342304..1342410,1342552..1342606,1342669..>1343163))	Acanthamoeba castellanii str. Neff	14913298
ACA1_097800	mRNA	ACA1_097800	NW_004457313.1	1343305	1347186	D	ACA1_097800	join(<1343305..1343935,1344015..1344085,1344163..1344360,1344429..1344592,1344686..1344902,1344987..1345162,1345293..1345423,1345491..1345693,1345771..1346056,1346149..1346396,1346466..1346615,1346699..1346913,1346982..>1347186)	Acanthamoeba castellanii str. Neff	14913299
ACA1_097810	mRNA	ACA1_097810	NW_004457313.1	1347896	1348255	D	ACA1_097810	<1347896..>1348255	Acanthamoeba castellanii str. Neff	14913300
ACA1_097820	mRNA	ACA1_097820	NW_004457313.1	1348439	1349977	R	ACA1_097820	complement(join(<1348439..1348666,1348737..1348868,1348934..1349068,1349156..1349305,1349411..1349523,1349600..1349750,1349825..>1349977))	Acanthamoeba castellanii str. Neff	14913435
ACA1_097830	mRNA	ACA1_097830	NW_004457313.1	1350296	1352735	R	ACA1_097830	complement(join(<1350296..1350424,1350520..1350589,1350671..1350810,1350940..1350997,1351082..1351151,1351240..1351310,1351414..1351775,1351803..1352197,1352309..>1352735))	Acanthamoeba castellanii str. Neff	14913436
ACA1_097840	mRNA	ACA1_097840	NW_004457313.1	1353586	1358536	D	ACA1_097840	join(<1353586..1353662,1353743..1353844,1353903..1353963,1354119..1354259,1354325..1354636,1354703..1355016,1355099..1355666,1355740..1355820,1355950..1356085,1356163..1356191,1356215..1356303,1356377..1356582,1356735..1356888,1356990..1357212,1357289..1357385,1357473..1357734,1357844..1358228,1358243..>1358536)	Acanthamoeba castellanii str. Neff	14913437
ACA1_097950	mRNA	ACA1_097950	NW_004457313.1	1361328	1362840	R	ACA1_097950	complement(join(<1361328..1361501,1361571..1361707,1361797..1362014,1362100..1362161,1362240..1362619,1362711..>1362840))	Acanthamoeba castellanii str. Neff	14913333
ACA1_097960	mRNA	ACA1_097960	NW_004457313.1	1363040	1363390	R	ACA1_097960	complement(join(<1363040..1363072,1363153..1363284,1363367..>1363390))	Acanthamoeba castellanii str. Neff	14913334
ACA1_097970	mRNA	ACA1_097970	NW_004457313.1	1363625	1366373	D	ACA1_097970	join(<1363625..1363798,1363872..1363909,1363987..1364117,1364197..1364320,1364392..1364595,1364700..1364943,1365022..1365309,1365386..1365564,1365650..>1366373)	Acanthamoeba castellanii str. Neff	14913330
ACA1_097980	mRNA	ACA1_097980	NW_004457313.1	1366459	1366956	R	ACA1_097980	complement(<1366459..>1366956)	Acanthamoeba castellanii str. Neff	14913331
ACA1_097990	mRNA	ACA1_097990	NW_004457313.1	1367965	1371305	R	ACA1_097990	complement(join(<1367965..1368007,1368077..1368246,1368346..1368426,1368510..1368612,1368695..1368780,1368894..1369013,1369103..1369234,1369306..1369435,1369513..1369669,1369747..1369922,1370014..1370845,1371010..1371168,1371239..>1371305))	Acanthamoeba castellanii str. Neff	14913332
ACA1_098000	mRNA	ACA1_098000	NW_004457313.1	1371819	1375904	D	ACA1_098000	join(<1371819..1372025,1372201..1372584,1372692..1372836,1372920..1375681,1375773..>1375904)	Acanthamoeba castellanii str. Neff	14913422
ACA1_098010	mRNA	ACA1_098010	NW_004457313.1	1376205	1377728	D	ACA1_098010	join(<1376205..1376437,1376598..1376697,1376810..1376986,1377060..1377302,1377383..1377495,1377599..>1377728)	Acanthamoeba castellanii str. Neff	14913423
ACA1_098020	mRNA	ACA1_098020	NW_004457313.1	1377822	1378793	R	ACA1_098020	complement(join(<1377822..1378003,1378096..1378261,1378404..1378727,1378752..>1378793))	Acanthamoeba castellanii str. Neff	14913364
ACA1_098030	mRNA	ACA1_098030	NW_004457313.1	1379150	1387792	R	ACA1_098030	complement(join(<1379150..1379844,1379950..1380080,1380153..1380536,1380621..1380725,1380818..1381417,1381526..1381709,1381817..1381949,1382036..1382100,1382174..1382267,1382574..1382730,1382803..1382928,1383015..1383157,1383240..1383304,1383387..1383598,1383661..1383862,1383933..1384117,1384220..1384407,1384487..1384737,1384809..1385562,1385633..1385845,1385919..1386110,1386258..1386520,1386601..1386739,1386827..>1387792))	Acanthamoeba castellanii str. Neff	14913365
ACA1_098040	mRNA	ACA1_098040	NW_004457313.1	1388122	1394144	R	ACA1_098040	complement(join(<1388122..1388293,1388371..1388455,1388538..1388659,1388745..1388886,1388971..1389214,1389273..1389414,1389490..1389659,1389776..1389896,1389970..1390238,1390329..1390439,1390521..1390670,1390752..1390924,1391003..1391116,1391200..1391302,1391414..1391638,1391707..1391804,1391912..1392074,1392163..1392305,1392407..1392738,1392848..1392996,1393075..1393105,1393207..1393391,1393447..1393545,1393633..1393707,1393863..>1394144))	Acanthamoeba castellanii str. Neff	14913366
ACA1_098050	mRNA	ACA1_098050	NW_004457313.1	1394777	1396522	D	ACA1_098050	join(<1394777..1394968,1395045..1395096,1395163..1395276,1395354..1395437,1395518..1395594,1395671..>1396522)	Acanthamoeba castellanii str. Neff	14913458
ACA1_098060	mRNA	ACA1_098060	NW_004457313.1	1396790	1397324	D	ACA1_098060	join(<1396790..1396892,1396969..1397055,1397128..>1397324)	Acanthamoeba castellanii str. Neff	14913229
ACA1_098070	mRNA	ACA1_098070	NW_004457313.1	1397468	1398178	R	ACA1_098070	complement(join(<1397468..1397680,1397729..>1398178))	Acanthamoeba castellanii str. Neff	14913230
ACA1_098080	mRNA	ACA1_098080	NW_004457313.1	1398486	1399045	D	ACA1_098080	join(<1398486..1398644,1398738..1398809,1398896..>1399045)	Acanthamoeba castellanii str. Neff	14913231
ACA1_098090	mRNA	ACA1_098090	NW_004457313.1	1399346	1400569	D	ACA1_098090	join(<1399346..1399452,1399563..1399713,1399823..1399876,1399951..1400060,1400188..>1400569)	Acanthamoeba castellanii str. Neff	14913260
ACA1_098100	mRNA	ACA1_098100	NW_004457313.1	1400927	1402432	R	ACA1_098100	complement(join(<1400927..1401158,1401239..1401450,1401516..1401792,1401898..1402103,1402178..>1402432))	Acanthamoeba castellanii str. Neff	14913261
ACA1_098110	mRNA	ACA1_098110	NW_004457313.1	1402693	1404570	R	ACA1_098110	complement(join(<1402693..1402943,1403008..1403159,1403243..1403459,1403628..>1404570))	Acanthamoeba castellanii str. Neff	14913262
ACA1_098120	mRNA	ACA1_098120	NW_004457313.1	1405072	1405549	D	ACA1_098120	join(<1405072..1405089,1405226..1405343,1405479..>1405549)	Acanthamoeba castellanii str. Neff	14913263
ACA1_098130	mRNA	ACA1_098130	NW_004457313.1	1405700	1407051	R	ACA1_098130	complement(join(<1405700..1405953,1406052..1406195,1406268..1406448,1406529..1406632,1406733..>1407051))	Acanthamoeba castellanii str. Neff	14913264
ACA1_098140	mRNA	ACA1_098140	NW_004457313.1	1407284	1408247	D	ACA1_098140	join(<1407284..1407458,1407557..1407652,1407738..1407920,1407997..>1408247)	Acanthamoeba castellanii str. Neff	14913265
ACA1_098150	mRNA	ACA1_098150	NW_004457313.1	1408302	1409495	R	ACA1_098150	complement(<1408302..>1409495)	Acanthamoeba castellanii str. Neff	14913266
ACA1_098160	mRNA	ACA1_098160	NW_004457313.1	1410212	1413119	R	ACA1_098160	complement(join(<1410212..1410366,1410449..1410695,1410762..1410853,1410915..1411158,1411244..1411447,1411533..1411634,1411798..1411932,1412034..1412159,1412234..1412370,1412455..1412756,1412944..>1413119))	Acanthamoeba castellanii str. Neff	14913604
ACA1_098170	mRNA	ACA1_098170	NW_004457313.1	1413659	1415548	D	ACA1_098170	join(<1413659..1414327,1414403..1414660,1414737..1414823,1414881..1415006,1415087..>1415548)	Acanthamoeba castellanii str. Neff	14913605
ACA1_098180	mRNA	ACA1_098180	NW_004457313.1	1416553	1423246	D	ACA1_098180	join(<1416553..1416562,1416629..1416771,1416850..1416915,1417123..1417425,1417515..1417671,1417757..1418158,1418224..1418336,1418425..1418589,1418692..1418760,1418844..1419117,1419195..1419542,1419614..1419821,1419899..1420004,1420081..1420197,1420319..1420625,1420928..1420979,1421073..1421608,1421628..1421650,1421670..1421994,1422088..1422819,1422921..>1423246)	Acanthamoeba castellanii str. Neff	14913606
ACA1_098190	mRNA	ACA1_098190	NW_004457313.1	1423281	1427099	R	ACA1_098190	complement(join(<1423281..1423897,1423984..1424143,1424231..1424437,1424533..1424618,1424727..1424889,1425020..1425232,1425317..1425428,1425531..1425678,1425766..1425935,1425996..1426102,1426191..1426325,1426446..1426779,1426858..>1427099))	Acanthamoeba castellanii str. Neff	14913607
ACA1_098200	mRNA	ACA1_098200	NW_004457313.1	1427357	1429226	D	ACA1_098200	join(<1427357..1427423,1427504..1427623,1427715..1427798,1427881..1427945,1428014..1428089,1428153..1428221,1428302..1428430,1428530..1428603,1428704..1428784,1428885..1429030,1429073..>1429226)	Acanthamoeba castellanii str. Neff	14913608
ACA1_098210	mRNA	ACA1_098210	NW_004457313.1	1429648	1431541	D	ACA1_098210	join(<1429648..1429750,1429832..1429951,1430018..1430101,1430196..1430260,1430333..1430408,1430482..1430550,1430631..1430759,1430851..1430924,1431017..1431097,1431201..1431313,1431388..>1431541)	Acanthamoeba castellanii str. Neff	14913609
ACA1_098220	mRNA	ACA1_098220	NW_004457313.1	1431615	1433512	R	ACA1_098220	complement(join(<1431615..1432294,1432495..1432856,1432945..1433046,1433124..1433250,1433350..>1433512))	Acanthamoeba castellanii str. Neff	14913610
ACA1_098230	mRNA	ACA1_098230	NW_004457313.1	1433617	1434207	R	ACA1_098230	complement(join(<1433617..1433747,1433833..1433935,1434007..>1434207))	Acanthamoeba castellanii str. Neff	14913615
ACA1_098240	mRNA	ACA1_098240	NW_004457313.1	1434856	1441229	D	ACA1_098240	join(<1434856..1434946,1435029..1435315,1435439..1435729,1435806..1435962,1436084..1436598,1436697..1436861,1436948..1437016,1437082..1437355,1437373..1437411,1437427..1437774,1437847..1438057,1438135..1438240,1438334..1438450,1438611..1438917,1439014..1439065,1439160..1440088,1440163..>1441229)	Acanthamoeba castellanii str. Neff	14913616
ACA1_098250	mRNA	ACA1_098250	NW_004457313.1	1441373	1443896	R	ACA1_098250	complement(join(<1441373..1441482,1441555..1441647,1441718..1441832,1441944..1442123,1442221..1442277,1442355..1442445,1442539..1442634,1442716..1442856,1442946..1443089,1443171..1443369,1443466..1443642,1443740..>1443896))	Acanthamoeba castellanii str. Neff	14913617
ACA1_098260	mRNA	ACA1_098260	NW_004457313.1	1444021	1448372	D	ACA1_098260	join(<1444021..1444081,1444345..1444449,1444564..1444716,1444817..1444917,1445034..1445106,1445231..1445358,1445735..1445966,1446051..1446136,1446219..1446296,1446438..1446597,1447181..1447324,1447456..1447552,1447635..1447723,1447832..1447867,1447939..1448049,1448215..>1448372)	Acanthamoeba castellanii str. Neff	14913618
ACA1_098270	mRNA	ACA1_098270	NW_004457313.1	1448622	1452528	D	ACA1_098270	join(<1448622..1448677,1448748..1448843,1448942..1449056,1449164..1449263,1449333..1449439,1449592..1449651,1449737..1449781,1449869..1449968,1450056..1450192,1450326..1450452,1450927..1451028,1451125..1451197,1451300..1451358,1451493..1451666,1451789..1451871,1452209..1452358,1452469..>1452528)	Acanthamoeba castellanii str. Neff	14913619
ACA1_098280	mRNA	ACA1_098280	NW_004457313.1	1452767	1455641	D	ACA1_098280	join(<1452767..1452808,1453007..1453062,1453174..1453371,1453484..1453570,1453681..1453820,1453961..1454088,1454202..1454335,1454415..1454496,1454590..1454703,1454796..1454873,1454980..1455069,1455137..1455287,1455565..>1455641)	Acanthamoeba castellanii str. Neff	14913620
ACA1_318870	mRNA	ACA1_318870	NW_004457312.1	851	7341	R	ACA1_318870	complement(join(<851..1014,1068..1138,1248..1486,2328..2386,2476..2771,2853..2973,3085..3676,3766..3939,4049..4240,4406..4515,4688..4951,5195..5293,7252..>7341))	Acanthamoeba castellanii str. Neff	14913097
ACA1_319080	mRNA	ACA1_319080	NW_004457312.1	7606	8275	D	ACA1_319080	join(<7606..7728,7872..7937,8009..>8275)	Acanthamoeba castellanii str. Neff	14913095
ACA1_319090	mRNA	ACA1_319090	NW_004457312.1	8553	13115	D	ACA1_319090	join(<8553..8737,8845..9151,9214..9387,9522..9898,9983..10117,10179..10333,10446..10540,10617..10781,10867..10957,11029..11152,11234..11311,11443..11718,11915..12080,12203..12292,12437..12565,12641..12722,12946..>13115)	Acanthamoeba castellanii str. Neff	14913100
ACA1_319100	mRNA	ACA1_319100	NW_004457312.1	13424	14884	D	ACA1_319100	join(<13424..13539,13628..13781,13858..14299,14392..14464,14524..>14884)	Acanthamoeba castellanii str. Neff	14913098
ACA1_319110	mRNA	ACA1_319110	NW_004457312.1	15234	16722	D	ACA1_319110	join(<15234..15430,15548..15833,15910..16035,16130..16342,16450..>16722)	Acanthamoeba castellanii str. Neff	14913099
ACA1_319220	mRNA	ACA1_319220	NW_004457312.1	22648	23322	R	ACA1_319220	complement(join(<22648..22823,22899..>23322))	Acanthamoeba castellanii str. Neff	14913096
ACA1_309610	mRNA	ACA1_309610	NW_004457311.1	26	535	D	ACA1_309610	join(<26..76,181..296,376..>535)	Acanthamoeba castellanii str. Neff	14913090
ACA1_309620	mRNA	ACA1_309620	NW_004457311.1	1141	4063	D	ACA1_309620	join(<1141..1291,1372..1463,1635..1736,1809..2004,2100..2241,2348..2435,2522..2746,2958..3162,3271..3418,3517..3685,3773..>4063)	Acanthamoeba castellanii str. Neff	14913087
ACA1_309630	mRNA	ACA1_309630	NW_004457311.1	4640	6855	D	ACA1_309630	join(<4640..5219,5298..5485,5602..5731,5822..>6855)	Acanthamoeba castellanii str. Neff	14913093
ACA1_309640	mRNA	ACA1_309640	NW_004457311.1	7051	8532	R	ACA1_309640	complement(join(<7051..7174,7251..7399,7465..7572,7678..7789,7905..7998,8115..8253,8341..>8532))	Acanthamoeba castellanii str. Neff	14913094
ACA1_309650	mRNA	ACA1_309650	NW_004457311.1	8851	10210	D	ACA1_309650	join(<8851..8949,9016..9144,9206..9882,9925..>10210)	Acanthamoeba castellanii str. Neff	14913088
ACA1_309660	mRNA	ACA1_309660	NW_004457311.1	11979	15326	D	ACA1_309660	join(<11979..12047,12159..12195,12283..12410,12487..12690,12757..12894,12966..13078,13165..13252,13368..13460,13540..13679,13805..13951,14057..14147,14271..14387,14498..14617,14699..14809,14937..15095,15183..>15326)	Acanthamoeba castellanii str. Neff	14913089
ACA1_309680	mRNA	ACA1_309680	NW_004457311.1	15470	16226	D	ACA1_309680	join(<15470..15556,15638..15691,15766..16003,16090..>16226)	Acanthamoeba castellanii str. Neff	14913091
ACA1_309690	mRNA	ACA1_309690	NW_004457311.1	16257	17612	D	ACA1_309690	join(<16257..16302,16380..16597,16684..16720,16731..16813,16898..17045,17157..17275,17356..17389,17407..17503,17579..>17612)	Acanthamoeba castellanii str. Neff	14913092
ACA1_297320	mRNA	ACA1_297320	NW_004457310.1	466	980	D	ACA1_297320	join(<466..535,626..684,768..>980)	Acanthamoeba castellanii str. Neff	14913085
ACA1_297430	mRNA	ACA1_297430	NW_004457310.1	6198	9246	R	ACA1_297430	complement(join(<6198..6264,6336..6430,6500..6632,6719..6990,7094..7179,7279..7360,7420..7482,7587..7687,7762..7907,8000..8115,8329..8488,8573..8667,8742..8896,8989..9093,9162..>9246))	Acanthamoeba castellanii str. Neff	14913086
ACA1_021050	mRNA	ACA1_021050	NW_004457309.1	27	452	R	ACA1_021050	complement(join(<27..156,230..284,371..>452))	Acanthamoeba castellanii str. Neff	14913081
ACA1_021160	mRNA	ACA1_021160	NW_004457309.1	6348	6794	D	ACA1_021160	join(<6348..6406,6461..6531,6604..>6794)	Acanthamoeba castellanii str. Neff	14913084
ACA1_021170	mRNA	ACA1_021170	NW_004457309.1	7294	7808	D	ACA1_021170	join(<7294..7373,7439..7621,7802..>7808)	Acanthamoeba castellanii str. Neff	14913082
ACA1_021280	mRNA	ACA1_021280	NW_004457309.1	13737	14268	R	ACA1_021280	complement(join(<13737..13791,13894..14158,14222..>14268))	Acanthamoeba castellanii str. Neff	14913083
ACA1_329120	mRNA	ACA1_329120	NW_004457308.1	995	2370	R	ACA1_329120	complement(join(<995..1055,1129..1193,1505..1609,1822..1934,2039..2125,2199..>2370))	Acanthamoeba castellanii str. Neff	14913062
ACA1_329330	mRNA	ACA1_329330	NW_004457308.1	2931	3777	R	ACA1_329330	complement(join(<2931..3031,3109..3380,3536..>3777))	Acanthamoeba castellanii str. Neff	14913067
ACA1_329340	mRNA	ACA1_329340	NW_004457308.1	4155	4744	D	ACA1_329340	join(<4155..4327,4419..4471,4581..>4744)	Acanthamoeba castellanii str. Neff	14913063
ACA1_329450	mRNA	ACA1_329450	NW_004457308.1	12557	15391	R	ACA1_329450	complement(join(<12557..12667,12784..12924,13008..13155,13254..13285,13405..13493,13568..13625,13861..13968,14046..14156,14241..14336,14413..14468,14558..14615,14728..14790,14887..14987,15070..15205,15323..>15391))	Acanthamoeba castellanii str. Neff	14913064
ACA1_329460	mRNA	ACA1_329460	NW_004457308.1	16190	16657	R	ACA1_329460	complement(<16190..>16657)	Acanthamoeba castellanii str. Neff	14913068
ACA1_329470	mRNA	ACA1_329470	NW_004457308.1	17199	19676	R	ACA1_329470	complement(join(<17199..17280,17378..17442,17743..17860,17982..18076,18163..18291,18406..18503,18662..18771,18859..18947,19061..19153,19226..19307,19387..19499,19548..>19676))	Acanthamoeba castellanii str. Neff	14913069
ACA1_329480	mRNA	ACA1_329480	NW_004457308.1	19958	21483	R	ACA1_329480	complement(join(<19958..20383,20444..21051,21153..21408,21478..>21483))	Acanthamoeba castellanii str. Neff	14913079
ACA1_329490	mRNA	ACA1_329490	NW_004457308.1	21771	23815	R	ACA1_329490	complement(join(<21771..21875,21975..22009,22088..22181,22269..22346,22427..22542,22620..22743,22822..22890,22971..23037,23119..23184,23264..23336,23409..23549,23629..>23815))	Acanthamoeba castellanii str. Neff	14913080
ACA1_329500	mRNA	ACA1_329500	NW_004457308.1	24448	25730	D	ACA1_329500	join(<24448..24603,24710..24786,24882..25008,25113..25420,25499..>25730)	Acanthamoeba castellanii str. Neff	14913065
ACA1_329510	mRNA	ACA1_329510	NW_004457308.1	26369	31840	D	ACA1_329510	join(<26369..26445,26661..26715,26878..27020,27109..27212,27276..27370,27447..27563,27645..27760,27836..27917,27992..28195,28278..28368,28446..28561,28640..28776,28792..28916,28988..29065,29148..29239,29422..29449,29522..29694,29776..29916,29984..30073,30164..30319,30415..30510,30625..30819,30909..31049,31160..31479,31589..31726,31831..>31840)	Acanthamoeba castellanii str. Neff	14913066
ACA1_329620	mRNA	ACA1_329620	NW_004457308.1	32227	32796	R	ACA1_329620	complement(<32227..>32796)	Acanthamoeba castellanii str. Neff	14913072
ACA1_329630	mRNA	ACA1_329630	NW_004457308.1	33077	33637	R	ACA1_329630	complement(<33077..>33637)	Acanthamoeba castellanii str. Neff	14913073
ACA1_329640	mRNA	ACA1_329640	NW_004457308.1	33820	37248	D	ACA1_329640	join(<33820..34069,34186..34292,34413..34644,34733..34986,35070..35528,35607..35787,35863..36083,36198..36297,36370..36533,36614..36820,36923..37012,37090..>37248)	Acanthamoeba castellanii str. Neff	14913074
ACA1_329650	mRNA	ACA1_329650	NW_004457308.1	37374	38261	R	ACA1_329650	complement(join(<37374..37527,37590..37662,37727..37827,37915..37997,38062..38124,38217..>38261))	Acanthamoeba castellanii str. Neff	14913075
ACA1_329660	mRNA	ACA1_329660	NW_004457308.1	38826	44518	D	ACA1_329660	join(<38826..39183,39313..39499,39626..39689,39772..39829,39925..40034,40133..40316,40418..40635,40749..40848,40975..41044,41148..41218,41306..41463,41566..41658,41719..41849,41954..42295,42433..42484,42553..42675,42842..43077,43208..43319,43450..43583,43713..44364,44459..>44518)	Acanthamoeba castellanii str. Neff	14913076
ACA1_329670	mRNA	ACA1_329670	NW_004457308.1	44606	47049	D	ACA1_329670	join(<44606..45017,45107..45349,45467..45809,45886..46022,46127..46197,46318..46436,46543..46605,46698..46755,46936..>47049)	Acanthamoeba castellanii str. Neff	14913070
ACA1_329680	mRNA	ACA1_329680	NW_004457308.1	47686	50717	R	ACA1_329680	complement(join(<47686..47779,47885..48097,48223..48301,48386..48523,48634..48755,48850..48950,49028..49223,49317..49504,49572..49656,49737..49904,50005..50079,50196..50256,50345..>50717))	Acanthamoeba castellanii str. Neff	14913071
ACA1_329690	mRNA	ACA1_329690	NW_004457308.1	51231	52015	R	ACA1_329690	complement(join(<51231..51368,51411..51956,51980..>52015))	Acanthamoeba castellanii str. Neff	14913077
ACA1_329700	mRNA	ACA1_329700	NW_004457308.1	52163	53617	D	ACA1_329700	join(<52163..52313,52409..52679,52794..52884,52972..53182,53259..53369,53454..>53617)	Acanthamoeba castellanii str. Neff	14913078
ACA1_329710	mRNA	ACA1_329710	NW_004457308.1	53719	54321	R	ACA1_329710	complement(<53719..>54321)	Acanthamoeba castellanii str. Neff	14913061
ACA1_156020	mRNA	ACA1_156020	NW_004457307.1	3774	4432	R	ACA1_156020	complement(join(<3774..3918,4055..4185,4368..>4432))	Acanthamoeba castellanii str. Neff	14913051
ACA1_156030	mRNA	ACA1_156030	NW_004457307.1	4742	9284	D	ACA1_156030	join(<4742..4825,4922..5024,5105..5332,5404..5472,5548..5631,5707..5781,5868..6011,6099..6173,6257..6311,6392..6458,6555..6633,6714..6802,6891..7251,7325..7948,8032..9117,9205..>9284)	Acanthamoeba castellanii str. Neff	14913038
ACA1_156040	mRNA	ACA1_156040	NW_004457307.1	9479	12310	D	ACA1_156040	join(<9479..9573,9824..9936,10062..11284,11381..11466,11548..11662,11734..11823,12077..>12310)	Acanthamoeba castellanii str. Neff	14913039
ACA1_156050	mRNA	ACA1_156050	NW_004457307.1	12694	15110	D	ACA1_156050	join(<12694..13054,13127..13246,13326..13454,13547..13678,13716..13874,13935..14060,14127..14255,14319..14447,14505..14590,14656..14695,14750..14875,14953..>15110)	Acanthamoeba castellanii str. Neff	14913037
ACA1_156060	mRNA	ACA1_156060	NW_004457307.1	15951	18037	D	ACA1_156060	join(<15951..15976,16094..16221,16374..17040,17122..17233,17326..17529,17624..17698,17791..17861,17872..>18037)	Acanthamoeba castellanii str. Neff	14913040
ACA1_156070	mRNA	ACA1_156070	NW_004457307.1	18073	18898	R	ACA1_156070	complement(join(<18073..18227,18301..18384,18506..18660,18774..>18898))	Acanthamoeba castellanii str. Neff	14913034
ACA1_156080	mRNA	ACA1_156080	NW_004457307.1	18921	20253	R	ACA1_156080	complement(join(<18921..18970,18983..19053,19115..19248,19326..19463,19549..19641,19746..19814,19877..19978,20059..>20253))	Acanthamoeba castellanii str. Neff	14913035
ACA1_156090	mRNA	ACA1_156090	NW_004457307.1	20478	22595	D	ACA1_156090	join(<20478..20542,20627..20757,20829..20966,21129..21610,21692..21811,21923..22057,22204..22232,22316..22392,22534..>22595)	Acanthamoeba castellanii str. Neff	14913036
ACA1_156200	mRNA	ACA1_156200	NW_004457307.1	22917	24683	D	ACA1_156200	join(<22917..23438,23554..23666,23782..24188,24277..24394,24521..>24683)	Acanthamoeba castellanii str. Neff	14913059
ACA1_156210	mRNA	ACA1_156210	NW_004457307.1	24982	27264	R	ACA1_156210	complement(join(<24982..25207,25274..25371,25445..25506,25643..25765,25828..25925,26001..26149,26251..26485,26598..26696,26820..26890,26980..27079,27206..>27264))	Acanthamoeba castellanii str. Neff	14913060
ACA1_156320	mRNA	ACA1_156320	NW_004457307.1	31386	33626	D	ACA1_156320	join(<31386..31553,31624..31680,32206..32251,32313..32440,32611..32749,32993..33099,33549..>33626)	Acanthamoeba castellanii str. Neff	14913045
ACA1_156330	mRNA	ACA1_156330	NW_004457307.1	35212	35557	D	ACA1_156330	join(<35212..35335,35430..>35557)	Acanthamoeba castellanii str. Neff	14913046
ACA1_156340	mRNA	ACA1_156340	NW_004457307.1	35673	36362	D	ACA1_156340	join(<35673..35775,35854..36011,36100..36215,36239..>36362)	Acanthamoeba castellanii str. Neff	14913047
ACA1_156350	mRNA	ACA1_156350	NW_004457307.1	36737	36898	R	ACA1_156350	complement(<36737..>36898)	Acanthamoeba castellanii str. Neff	14913056
ACA1_156460	mRNA	ACA1_156460	NW_004457307.1	41355	41671	D	ACA1_156460	join(<41355..41420,41507..>41671)	Acanthamoeba castellanii str. Neff	14913057
ACA1_156470	mRNA	ACA1_156470	NW_004457307.1	41855	43021	R	ACA1_156470	complement(join(<41855..41920,42018..42358,42475..42572,42756..>43021))	Acanthamoeba castellanii str. Neff	14913058
ACA1_156480	mRNA	ACA1_156480	NW_004457307.1	43618	45461	D	ACA1_156480	join(<43618..43716,43834..43942,44043..44146,44239..44530,44607..44699,44792..44890,45001..45227,45333..>45461)	Acanthamoeba castellanii str. Neff	14913048
ACA1_156490	mRNA	ACA1_156490	NW_004457307.1	46651	54147	D	ACA1_156490	join(<46651..46665,46680..46809,46892..47038,47105..47289,47354..47459,47541..47595,47895..48025,48122..48247,48371..48526,48839..49088,49175..49340,49438..49483,49556..49630,49725..49853,49928..50065,50180..50307,50394..50535,50620..50752,50840..50912,50993..51070,51156..51317,51390..51473,51555..51644,51715..51807,51915..52016,52289..52362,52450..52522,52603..52680,52757..52918,52992..53075,53402..53494,53602..53794,53966..>54147)	Acanthamoeba castellanii str. Neff	14913049
ACA1_156700	mRNA	ACA1_156700	NW_004457307.1	54954	56408	D	ACA1_156700	join(<54954..55070,55154..55202,55268..55368,55455..55514,55636..55696,55786..55893,55977..56039,56122..56287,56372..>56408)	Acanthamoeba castellanii str. Neff	14913050
ACA1_156720	mRNA	ACA1_156720	NW_004457307.1	58025	59377	D	ACA1_156720	join(<58025..58112,58196..58346,58453..58738,58838..>59377)	Acanthamoeba castellanii str. Neff	14913052
ACA1_156730	mRNA	ACA1_156730	NW_004457307.1	59624	60827	R	ACA1_156730	complement(join(<59624..60437,60514..60552,60619..>60827))	Acanthamoeba castellanii str. Neff	14913053
ACA1_156740	mRNA	ACA1_156740	NW_004457307.1	61832	62234	D	ACA1_156740	join(<61832..61924,62023..62064,62156..62202,62222..>62234)	Acanthamoeba castellanii str. Neff	14913054
ACA1_156750	mRNA	ACA1_156750	NW_004457307.1	62994	63493	D	ACA1_156750	<62994..>63493	Acanthamoeba castellanii str. Neff	14913041
ACA1_156860	mRNA	ACA1_156860	NW_004457307.1	63850	64815	R	ACA1_156860	complement(join(<63850..64423,64499..64537,64604..>64815))	Acanthamoeba castellanii str. Neff	14913042
ACA1_156870	mRNA	ACA1_156870	NW_004457307.1	65943	66623	D	ACA1_156870	join(<65943..65990,66056..66142,66213..66305,66441..>66623)	Acanthamoeba castellanii str. Neff	14913043
ACA1_157080	mRNA	ACA1_157080	NW_004457307.1	73510	80709	R	ACA1_157080	complement(join(<73510..74126,74231..74719,74804..75057,75176..76139,76239..76335,76430..76546,76626..76885,76995..77148,77176..77236,77314..77461,77568..77700,77808..77855,78020..78261,78336..78670,78770..79083,79189..79506,79595..79732,79882..79939,80017..80119,80541..>80709))	Acanthamoeba castellanii str. Neff	14913044
ACA1_028150	mRNA	ACA1_028150	NW_004457306.1	8311	9229	R	ACA1_028150	complement(join(<8311..8435,8529..8636,8712..8750,8977..9069,9157..>9229))	Acanthamoeba castellanii str. Neff	14913023
ACA1_028160	mRNA	ACA1_028160	NW_004457306.1	9779	13317	D	ACA1_028160	join(<9779..10201,10308..10390,10485..11124,11204..11318,11413..11538,11664..11998,12082..12223,12317..12406,12481..12545,12615..12708,12781..12847,12943..13058,13136..>13317)	Acanthamoeba castellanii str. Neff	14913024
ACA1_028170	mRNA	ACA1_028170	NW_004457306.1	13832	15423	D	ACA1_028170	join(<13832..14131,14266..14544,14560..14633,14711..15180,15407..>15423)	Acanthamoeba castellanii str. Neff	14913033
ACA1_028180	mRNA	ACA1_028180	NW_004457306.1	15590	16509	D	ACA1_028180	join(<15590..15716,15776..15817,15872..15981,16037..16090,16159..16284,16351..>16509)	Acanthamoeba castellanii str. Neff	14913029
ACA1_028190	mRNA	ACA1_028190	NW_004457306.1	17040	19272	R	ACA1_028190	complement(join(<17040..17181,17265..17375,17470..17586,17651..17767,17856..17936,18005..18066,18129..18309,18707..18818,18987..19092,19162..>19272))	Acanthamoeba castellanii str. Neff	14913025
ACA1_028300	mRNA	ACA1_028300	NW_004457306.1	19369	20699	R	ACA1_028300	complement(join(<19369..19601,19672..19875,19944..20097,20177..20272,20334..>20699))	Acanthamoeba castellanii str. Neff	14913032
ACA1_028310	mRNA	ACA1_028310	NW_004457306.1	20755	21833	R	ACA1_028310	complement(join(<20755..20962,21026..21182,21473..21622,21692..>21833))	Acanthamoeba castellanii str. Neff	14913030
ACA1_028530	mRNA	ACA1_028530	NW_004457306.1	23370	24732	D	ACA1_028530	join(<23370..23422,23506..23740,23781..23897,23976..24077,24179..24307,24445..24618,24655..>24732)	Acanthamoeba castellanii str. Neff	14913026
ACA1_028540	mRNA	ACA1_028540	NW_004457306.1	25039	25936	D	ACA1_028540	join(<25039..25631,25715..25792,25873..>25936)	Acanthamoeba castellanii str. Neff	14913027
ACA1_309470	mRNA	ACA1_309470	NW_004457305.1	711	2920	D	ACA1_309470	join(<711..969,1044..1109,1181..1252,1340..1667,1754..1844,1937..>2920)	Acanthamoeba castellanii str. Neff	14913017
ACA1_309480	mRNA	ACA1_309480	NW_004457305.1	3342	5689	D	ACA1_309480	join(<3342..3479,3547..3639,3748..3879,3952..4049,4169..4268,4354..4411,4495..4606,4684..4870,4968..5302,5515..>5689)	Acanthamoeba castellanii str. Neff	14913019
ACA1_309490	mRNA	ACA1_309490	NW_004457305.1	5947	7085	D	ACA1_309490	join(<5947..5970,6262..6403,6532..6679,6760..6855,6935..>7085)	Acanthamoeba castellanii str. Neff	14913018
ACA1_309500	mRNA	ACA1_309500	NW_004457305.1	8084	11253	D	ACA1_309500	join(<8084..8213,8285..8353,8430..8572,8656..8738,8874..8986,9084..9218,9326..9393,9477..9555,9653..9772,9850..9901,9989..10113,10176..10298,10396..10472,10534..10728,10803..10938,11014..11093,11173..>11253)	Acanthamoeba castellanii str. Neff	14913020
ACA1_309510	mRNA	ACA1_309510	NW_004457305.1	11643	12027	D	ACA1_309510	join(<11643..11681,11697..11834,11920..>12027)	Acanthamoeba castellanii str. Neff	14913021
ACA1_050620	mRNA	ACA1_050620	NW_004457304.1	58	1482	D	ACA1_050620	join(<58..137,215..389,465..550,620..749,850..981,1084..1228,1316..>1482)	Acanthamoeba castellanii str. Neff	14913016
ACA1_050630	mRNA	ACA1_050630	NW_004457304.1	2364	3333	R	ACA1_050630	complement(join(<2364..2549,2624..2686,2800..2899,2994..3145,3235..>3333))	Acanthamoeba castellanii str. Neff	14913015
ACA1_050750	mRNA	ACA1_050750	NW_004457304.1	8321	9283	R	ACA1_050750	complement(join(<8321..8486,8565..>9283))	Acanthamoeba castellanii str. Neff	14913012
ACA1_050760	mRNA	ACA1_050760	NW_004457304.1	9764	11455	R	ACA1_050760	complement(join(<9764..10191,10277..10421,10506..10625,10719..10814,10896..10968,11030..11090,11158..>11455))	Acanthamoeba castellanii str. Neff	14913013
ACA1_346250	mRNA	ACA1_346250	NW_004457303.1	26	2821	D	ACA1_346250	join(<26..149,294..433,465..623,703..1071,1105..1185,1826..2003,2123..2182,2206..2261,2333..2425,2534..>2821)	Acanthamoeba castellanii str. Neff	14913006
ACA1_346360	mRNA	ACA1_346360	NW_004457303.1	7374	7559	R	ACA1_346360	complement(<7374..>7559)	Acanthamoeba castellanii str. Neff	14913011
ACA1_346470	mRNA	ACA1_346470	NW_004457303.1	14420	15626	R	ACA1_346470	complement(join(<14420..14434,14527..14635,14762..14852,14926..14992,15108..15178,15332..15392,15519..>15626))	Acanthamoeba castellanii str. Neff	14912995
ACA1_346480	mRNA	ACA1_346480	NW_004457303.1	16518	18104	R	ACA1_346480	complement(join(<16518..17506,17921..>18104))	Acanthamoeba castellanii str. Neff	14913000
ACA1_346490	mRNA	ACA1_346490	NW_004457303.1	19476	22255	R	ACA1_346490	complement(join(<19476..19599,19696..19858,19935..20040,20098..20179,20258..20629,20694..20791,20859..22049,22214..>22255))	Acanthamoeba castellanii str. Neff	14913001
ACA1_346500	mRNA	ACA1_346500	NW_004457303.1	22861	25413	R	ACA1_346500	complement(join(<22861..22914,23021..23085,23167..23312,23394..23448,23546..23685,23771..23834,23906..23974,24044..24136,24242..24440,24514..24835,24940..24991,25070..25126,25194..>25413))	Acanthamoeba castellanii str. Neff	14912996
ACA1_346610	mRNA	ACA1_346610	NW_004457303.1	27646	30105	D	ACA1_346610	join(<27646..27872,28063..28225,28335..28519,29683..29753,29846..>30105)	Acanthamoeba castellanii str. Neff	14912997
ACA1_346730	mRNA	ACA1_346730	NW_004457303.1	31628	31968	R	ACA1_346730	complement(join(<31628..31723,31756..>31968))	Acanthamoeba castellanii str. Neff	14913008
ACA1_346840	mRNA	ACA1_346840	NW_004457303.1	35471	35883	R	ACA1_346840	complement(join(<35471..35476,35532..35725,35868..>35883))	Acanthamoeba castellanii str. Neff	14913009
ACA1_346850	mRNA	ACA1_346850	NW_004457303.1	36086	36553	R	ACA1_346850	complement(<36086..>36553)	Acanthamoeba castellanii str. Neff	14913010
ACA1_346860	mRNA	ACA1_346860	NW_004457303.1	36838	37428	R	ACA1_346860	complement(<36838..>37428)	Acanthamoeba castellanii str. Neff	14913002
ACA1_346870	mRNA	ACA1_346870	NW_004457303.1	38229	38626	R	ACA1_346870	complement(join(<38229..38236,38369..38537,38609..>38626))	Acanthamoeba castellanii str. Neff	14913003
ACA1_346880	mRNA	ACA1_346880	NW_004457303.1	39028	39440	R	ACA1_346880	complement(join(<39028..39174,39384..>39440))	Acanthamoeba castellanii str. Neff	14913004
ACA1_346890	mRNA	ACA1_346890	NW_004457303.1	39661	40029	R	ACA1_346890	complement(join(<39661..39703,39782..39833,39894..>40029))	Acanthamoeba castellanii str. Neff	14913005
ACA1_346900	mRNA	ACA1_346900	NW_004457303.1	40226	42187	D	ACA1_346900	join(<40226..40575,40637..40777,40830..41013,41097..41175,41237..41392,41466..41551,41630..41740,41801..41959,42023..>42187)	Acanthamoeba castellanii str. Neff	14912998
ACA1_346910	mRNA	ACA1_346910	NW_004457303.1	42378	44132	R	ACA1_346910	complement(join(<42378..42722,42795..43028,43109..43309,43438..43753,43852..>44132))	Acanthamoeba castellanii str. Neff	14912999
ACA1_329820	mRNA	ACA1_329820	NW_004457302.1	3218	5927	R	ACA1_329820	complement(join(<3218..3372,3462..3551,3654..3707,3809..3904,4014..4095,4215..4279,4613..4783,4879..4977,5095..5308,5415..5512,5631..5717,5825..>5927))	Acanthamoeba castellanii str. Neff	14912966
ACA1_329830	mRNA	ACA1_329830	NW_004457302.1	6406	8270	R	ACA1_329830	complement(join(<6406..6535,6629..6715,6877..6955,7069..7646,7748..7837,7933..8032,8171..>8270))	Acanthamoeba castellanii str. Neff	14912967
ACA1_329840	mRNA	ACA1_329840	NW_004457302.1	9256	11160	D	ACA1_329840	join(<9256..9263,9285..9303,9327..9753,9835..10060,10249..10372,10453..10552,10955..>11160)	Acanthamoeba castellanii str. Neff	14912974
ACA1_329850	mRNA	ACA1_329850	NW_004457302.1	11233	13462	R	ACA1_329850	complement(join(<11233..11472,11582..11733,11836..11934,12017..12158,12276..12310,12412..12510,12593..12734,12837..12926,13074..13172,13301..13406,13437..>13462))	Acanthamoeba castellanii str. Neff	14912975
ACA1_329960	mRNA	ACA1_329960	NW_004457302.1	15607	20348	D	ACA1_329960	join(<15607..16242,16358..16485,16603..16656,16742..16840,16928..17031,17103..17245,17452..17563,17677..18537,18647..18852,19045..19205,19278..19296,19333..19458,19575..19689,19816..20013,20056..>20348)	Acanthamoeba castellanii str. Neff	14912980
ACA1_329980	mRNA	ACA1_329980	NW_004457302.1	24158	25566	D	ACA1_329980	join(<24158..24190,24306..24404,24491..24594,24694..24836,24929..24992,25110..>25566)	Acanthamoeba castellanii str. Neff	14912988
ACA1_330090	mRNA	ACA1_330090	NW_004457302.1	27656	28734	D	ACA1_330090	join(<27656..27749,27816..27878,27953..28053,28141..28426,28565..>28734)	Acanthamoeba castellanii str. Neff	14912987
ACA1_330100	mRNA	ACA1_330100	NW_004457302.1	29202	29974	D	ACA1_330100	join(<29202..29323,29480..29531,29605..29723,29797..>29974)	Acanthamoeba castellanii str. Neff	14912989
ACA1_330110	mRNA	ACA1_330110	NW_004457302.1	32481	34849	D	ACA1_330110	join(<32481..32489,32578..33965,34088..34193,34313..34432,34525..34817,34840..>34849)	Acanthamoeba castellanii str. Neff	14912990
ACA1_330320	mRNA	ACA1_330320	NW_004457302.1	35083	40489	D	ACA1_330320	join(<35083..35115,35202..35498,35552..35659,35742..35867,35958..36047,36120..36179,36261..36654,36721..37791,37877..39005,39097..39202,39318..39437,39533..>40489)	Acanthamoeba castellanii str. Neff	14912991
ACA1_330330	mRNA	ACA1_330330	NW_004457302.1	40688	41140	D	ACA1_330330	join(<40688..40853,40926..>41140)	Acanthamoeba castellanii str. Neff	14912968
ACA1_330340	mRNA	ACA1_330340	NW_004457302.1	41247	43167	R	ACA1_330340	complement(join(<41247..41370,41481..41605,41819..41881,42002..42105,42246..42711,42804..42924,43043..>43167))	Acanthamoeba castellanii str. Neff	14912969
ACA1_330350	mRNA	ACA1_330350	NW_004457302.1	43532	45273	R	ACA1_330350	complement(join(<43532..43838,43994..44131,44211..44409,44485..44555,44672..44839,44954..45093,45172..>45273))	Acanthamoeba castellanii str. Neff	14912970
ACA1_330360	mRNA	ACA1_330360	NW_004457302.1	45670	47302	D	ACA1_330360	join(<45670..46113,46201..46434,46529..>47302)	Acanthamoeba castellanii str. Neff	14912972
ACA1_330370	mRNA	ACA1_330370	NW_004457302.1	47381	48922	R	ACA1_330370	complement(join(<47381..47521,47604..47847,48007..48108,48175..48448,48559..>48922))	Acanthamoeba castellanii str. Neff	14912973
ACA1_330380	mRNA	ACA1_330380	NW_004457302.1	49026	50586	D	ACA1_330380	join(<49026..49141,49212..49372,49461..49993,50101..50175,50254..50359,50435..>50586)	Acanthamoeba castellanii str. Neff	14912977
ACA1_330390	mRNA	ACA1_330390	NW_004457302.1	50677	52210	D	ACA1_330390	join(<50677..50684,50768..50901,51227..51316,51683..52008,52106..>52210)	Acanthamoeba castellanii str. Neff	14912978
ACA1_330400	mRNA	ACA1_330400	NW_004457302.1	52079	53663	R	ACA1_330400	complement(join(<52079..52234,52346..52399,52478..52553,52655..52801,52938..53026,53148..53302,53381..>53663))	Acanthamoeba castellanii str. Neff	14912979
ACA1_330410	mRNA	ACA1_330410	NW_004457302.1	53721	54353	D	ACA1_330410	join(<53721..53858,53948..54038,54139..>54353)	Acanthamoeba castellanii str. Neff	14912984
ACA1_330420	mRNA	ACA1_330420	NW_004457302.1	54454	56610	R	ACA1_330420	complement(join(<54454..54478,54581..54644,54752..54857,54964..55059,55178..55280,55359..55453,55526..55609,55708..55778,55864..55969,56044..56133,56197..56274,56351..56503,56572..>56610))	Acanthamoeba castellanii str. Neff	14912985
ACA1_330530	mRNA	ACA1_330530	NW_004457302.1	59663	59965	R	ACA1_330530	complement(<59663..>59965)	Acanthamoeba castellanii str. Neff	14912986
ACA1_330540	mRNA	ACA1_330540	NW_004457302.1	60290	61155	R	ACA1_330540	complement(join(<60290..60419,60536..60631,60755..60866,60955..60998,61088..>61155))	Acanthamoeba castellanii str. Neff	14912993
ACA1_330550	mRNA	ACA1_330550	NW_004457302.1	61385	63509	R	ACA1_330550	complement(join(<61385..61505,61606..61811,61968..62107,62217..62400,62602..62672,62760..62865,62960..63025,63099..63176,63253..63405,63471..>63509))	Acanthamoeba castellanii str. Neff	14912994
ACA1_330660	mRNA	ACA1_330660	NW_004457302.1	64106	66128	D	ACA1_330660	join(<64106..64445,64585..64808,64902..64973,65155..65252,65373..65509,66121..>66128)	Acanthamoeba castellanii str. Neff	14912981
ACA1_330770	mRNA	ACA1_330770	NW_004457302.1	66561	66863	R	ACA1_330770	complement(<66561..>66863)	Acanthamoeba castellanii str. Neff	14912982
ACA1_330780	mRNA	ACA1_330780	NW_004457302.1	67083	67584	R	ACA1_330780	complement(join(<67083..67128,67176..67287,67383..67426,67517..>67584))	Acanthamoeba castellanii str. Neff	14912983
ACA1_330890	mRNA	ACA1_330890	NW_004457302.1	72665	74969	D	ACA1_330890	join(<72665..72871,73095..73640,73779..73864,73955..74150,74239..74490,74621..74711,74818..>74969)	Acanthamoeba castellanii str. Neff	14912976
ACA1_168360	mRNA	ACA1_168360	NW_004457301.1	8986	9237	R	ACA1_168360	complement(join(<8986..9110,9153..>9237))	Acanthamoeba castellanii str. Neff	14912961
ACA1_168470	mRNA	ACA1_168470	NW_004457301.1	12726	13000	R	ACA1_168470	complement(join(<12726..12863,12956..>13000))	Acanthamoeba castellanii str. Neff	14912963
ACA1_168480	mRNA	ACA1_168480	NW_004457301.1	16195	17118	R	ACA1_168480	complement(join(<16195..16335,16479..16588,16691..16734,16812..16943,16988..>17118))	Acanthamoeba castellanii str. Neff	14912962
ACA1_168590	mRNA	ACA1_168590	NW_004457301.1	24038	24790	D	ACA1_168590	join(<24038..24155,24217..24372,24549..24668,24735..>24790)	Acanthamoeba castellanii str. Neff	14912964
ACA1_168700	mRNA	ACA1_168700	NW_004457301.1	30231	30610	R	ACA1_168700	complement(join(<30231..30452,30536..>30610))	Acanthamoeba castellanii str. Neff	14912965
ACA1_324680	mRNA	ACA1_324680	NW_004457300.1	245	433	D	ACA1_324680	<245..>433	Acanthamoeba castellanii str. Neff	14912940
ACA1_324710	mRNA	ACA1_324710	NW_004457300.1	12562	14548	R	ACA1_324710	complement(join(<12562..13480,13527..>14548))	Acanthamoeba castellanii str. Neff	14912946
ACA1_324720	mRNA	ACA1_324720	NW_004457300.1	14686	15136	D	ACA1_324720	join(<14686..14915,14953..>15136)	Acanthamoeba castellanii str. Neff	14912947
ACA1_324730	mRNA	ACA1_324730	NW_004457300.1	17436	19393	D	ACA1_324730	join(<17436..17470,17512..18220,18456..19258,19285..>19393)	Acanthamoeba castellanii str. Neff	14912959
ACA1_324740	mRNA	ACA1_324740	NW_004457300.1	20199	21623	R	ACA1_324740	complement(<20199..>21623)	Acanthamoeba castellanii str. Neff	14912960
ACA1_324750	mRNA	ACA1_324750	NW_004457300.1	21858	22842	R	ACA1_324750	complement(join(<21858..22768,22788..>22842))	Acanthamoeba castellanii str. Neff	14912938
ACA1_324770	mRNA	ACA1_324770	NW_004457300.1	24497	25421	R	ACA1_324770	complement(join(<24497..25206,25343..>25421))	Acanthamoeba castellanii str. Neff	14912948
ACA1_324780	mRNA	ACA1_324780	NW_004457300.1	25592	26245	D	ACA1_324780	<25592..>26245	Acanthamoeba castellanii str. Neff	14912949
ACA1_324790	mRNA	ACA1_324790	NW_004457300.1	27153	27524	D	ACA1_324790	<27153..>27524	Acanthamoeba castellanii str. Neff	14912950
ACA1_324810	mRNA	ACA1_324810	NW_004457300.1	31143	31889	D	ACA1_324810	<31143..>31889	Acanthamoeba castellanii str. Neff	14912930
ACA1_324820	mRNA	ACA1_324820	NW_004457300.1	31926	32558	D	ACA1_324820	<31926..>32558	Acanthamoeba castellanii str. Neff	14912931
ACA1_324830	mRNA	ACA1_324830	NW_004457300.1	33042	34036	D	ACA1_324830	join(<33042..33515,33617..>34036)	Acanthamoeba castellanii str. Neff	14912932
ACA1_324840	mRNA	ACA1_324840	NW_004457300.1	34571	35446	R	ACA1_324840	complement(<34571..>35446)	Acanthamoeba castellanii str. Neff	14912933
ACA1_324850	mRNA	ACA1_324850	NW_004457300.1	36268	37440	R	ACA1_324850	complement(<36268..>37440)	Acanthamoeba castellanii str. Neff	14912955
ACA1_324860	mRNA	ACA1_324860	NW_004457300.1	37663	39067	D	ACA1_324860	join(<37663..38708,38812..38941,39038..>39067)	Acanthamoeba castellanii str. Neff	14912956
ACA1_324870	mRNA	ACA1_324870	NW_004457300.1	39241	40484	R	ACA1_324870	complement(join(<39241..40137,40179..40257,40333..>40484))	Acanthamoeba castellanii str. Neff	14912957
ACA1_324880	mRNA	ACA1_324880	NW_004457300.1	41064	41816	R	ACA1_324880	complement(<41064..>41816)	Acanthamoeba castellanii str. Neff	14912958
ACA1_324890	mRNA	ACA1_324890	NW_004457300.1	43942	45111	D	ACA1_324890	<43942..>45111	Acanthamoeba castellanii str. Neff	14912934
ACA1_324900	mRNA	ACA1_324900	NW_004457300.1	45231	45797	D	ACA1_324900	<45231..>45797	Acanthamoeba castellanii str. Neff	14912935
ACA1_324910	mRNA	ACA1_324910	NW_004457300.1	46263	46982	R	ACA1_324910	complement(<46263..>46982)	Acanthamoeba castellanii str. Neff	14912936
ACA1_324920	mRNA	ACA1_324920	NW_004457300.1	47685	49490	R	ACA1_324920	complement(<47685..>49490)	Acanthamoeba castellanii str. Neff	14912937
ACA1_324930	mRNA	ACA1_324930	NW_004457300.1	50034	50674	R	ACA1_324930	complement(join(<50034..50531,50585..>50674))	Acanthamoeba castellanii str. Neff	14912941
ACA1_324940	mRNA	ACA1_324940	NW_004457300.1	50770	52941	D	ACA1_324940	<50770..>52941	Acanthamoeba castellanii str. Neff	14912942
ACA1_324950	mRNA	ACA1_324950	NW_004457300.1	53725	55051	R	ACA1_324950	complement(join(<53725..53783,53820..53894,54032..54183,54318..54502,54674..>55051))	Acanthamoeba castellanii str. Neff	14912943
ACA1_324960	mRNA	ACA1_324960	NW_004457300.1	56127	56747	R	ACA1_324960	complement(<56127..>56747)	Acanthamoeba castellanii str. Neff	14912951
ACA1_324970	mRNA	ACA1_324970	NW_004457300.1	57092	57862	D	ACA1_324970	join(<57092..57274,57290..>57862)	Acanthamoeba castellanii str. Neff	14912952
ACA1_324980	mRNA	ACA1_324980	NW_004457300.1	58167	60698	R	ACA1_324980	complement(join(<58167..58226,58307..58568,58695..58915,59397..59711,59970..>60698))	Acanthamoeba castellanii str. Neff	14912953
ACA1_324990	mRNA	ACA1_324990	NW_004457300.1	61468	61923	D	ACA1_324990	<61468..>61923	Acanthamoeba castellanii str. Neff	14912954
ACA1_325000	mRNA	ACA1_325000	NW_004457300.1	64258	65728	D	ACA1_325000	join(<64258..64638,64661..>65728)	Acanthamoeba castellanii str. Neff	14912928
ACA1_011910	mRNA	ACA1_011910	NW_004457299.1	1094	1588	R	ACA1_011910	complement(<1094..>1588)	Acanthamoeba castellanii str. Neff	14912924
ACA1_012020	mRNA	ACA1_012020	NW_004457299.1	2731	6132	R	ACA1_012020	complement(join(<2731..3336,3400..3504,3612..3751,3839..4009,4205..4352,4456..4590,4684..4818,4912..5181,5291..5417,5546..5780,5919..>6132))	Acanthamoeba castellanii str. Neff	14912923
ACA1_012030	mRNA	ACA1_012030	NW_004457299.1	6210	8044	D	ACA1_012030	join(<6210..6666,6818..6962,7259..7391,7499..>8044)	Acanthamoeba castellanii str. Neff	14912926
ACA1_012040	mRNA	ACA1_012040	NW_004457299.1	8143	10318	D	ACA1_012040	join(<8143..8302,8419..8501,8689..8731,8919..9146,9266..9387,9540..9728,9892..10045,10197..>10318)	Acanthamoeba castellanii str. Neff	14912927
ACA1_012050	mRNA	ACA1_012050	NW_004457299.1	10508	13537	D	ACA1_012050	join(<10508..10738,10816..11529,11702..12064,13451..>13537)	Acanthamoeba castellanii str. Neff	14912925
ACA1_023990	mRNA	ACA1_023990	NW_004457298.1	19	507	R	ACA1_023990	complement(<19..>507)	Acanthamoeba castellanii str. Neff	14912919
ACA1_024000	mRNA	ACA1_024000	NW_004457298.1	1096	2130	D	ACA1_024000	join(<1096..1125,1193..1342,1421..1464,1560..>2130)	Acanthamoeba castellanii str. Neff	14912920
ACA1_024010	mRNA	ACA1_024010	NW_004457298.1	2220	4096	R	ACA1_024010	complement(join(<2220..2446,2548..2677,2699..2776,2849..2976,3056..3207,3308..3359,3422..3550,3665..3814,3831..3851,3884..3967,4045..>4096))	Acanthamoeba castellanii str. Neff	14912922
ACA1_024020	mRNA	ACA1_024020	NW_004457298.1	4556	7930	R	ACA1_024020	complement(join(<4556..5460,5533..5560,5644..5771,5843..5901,5984..6050,6124..6202,6283..6389,6475..6603,6742..6804,6905..7010,7119..7262,7343..7426,7494..7598,7671..7763,7835..>7930))	Acanthamoeba castellanii str. Neff	14912921
ACA1_024030	mRNA	ACA1_024030	NW_004457298.1	8638	11758	D	ACA1_024030	join(<8638..8793,8869..8971,9008..9078,9154..9261,9335..9440,9552..10131,10207..10630,10714..10824,10896..11317,11408..11518,11593..>11758)	Acanthamoeba castellanii str. Neff	14912916
ACA1_024040	mRNA	ACA1_024040	NW_004457298.1	11898	16695	R	ACA1_024040	complement(join(<11898..12691,12813..12875,12973..13106,13201..13312,13435..13528,13661..13711,13797..13938,14015..14097,14174..14248,14374..14636,14713..14829,14949..14994,15071..15364,15449..15597,15674..15786,15920..16200,16300..16353,16684..>16695))	Acanthamoeba castellanii str. Neff	14912918
ACA1_024050	mRNA	ACA1_024050	NW_004457298.1	17885	20729	D	ACA1_024050	join(<17885..17965,18035..18100,18190..18351,18458..18538,18624..18828,18920..18992,19069..19113,19313..19407,19506..19737,19783..19958,20039..20504,20642..>20729)	Acanthamoeba castellanii str. Neff	14912917
ACA1_372330	mRNA	ACA1_372330	NW_004457297.1	119	1024	R	ACA1_372330	complement(join(<119..241,730..786,857..>1024))	Acanthamoeba castellanii str. Neff	14912869
ACA1_372340	mRNA	ACA1_372340	NW_004457297.1	1688	2193	R	ACA1_372340	complement(join(<1688..1840,1892..1942,2098..>2193))	Acanthamoeba castellanii str. Neff	14912805
ACA1_372450	mRNA	ACA1_372450	NW_004457297.1	4289	5918	R	ACA1_372450	complement(join(<4289..4446,4620..4752,4857..4927,5044..5117,5253..5530,5591..5775,5891..>5918))	Acanthamoeba castellanii str. Neff	14912894
ACA1_372560	mRNA	ACA1_372560	NW_004457297.1	8599	9271	D	ACA1_372560	join(<8599..8989,9051..>9271)	Acanthamoeba castellanii str. Neff	14912759
ACA1_372570	mRNA	ACA1_372570	NW_004457297.1	9572	13686	D	ACA1_372570	join(<9572..10314,10457..10562,10668..10802,10930..10984,11117..11229,11249..11296,11529..11617,11800..11913,12333..12504,12711..12830,12956..13096,13183..13418,13482..>13686)	Acanthamoeba castellanii str. Neff	14912886
ACA1_372580	mRNA	ACA1_372580	NW_004457297.1	15388	17505	R	ACA1_372580	complement(join(<15388..15512,15600..15653,15739..15881,15980..16039,16107..16187,16266..16396,16474..16554,16632..16728,16796..16889,16948..17056,17226..17300,17392..>17505))	Acanthamoeba castellanii str. Neff	14912887
ACA1_372590	mRNA	ACA1_372590	NW_004457297.1	17907	21686	D	ACA1_372590	<17907..>21686	Acanthamoeba castellanii str. Neff	14912851
ACA1_372600	mRNA	ACA1_372600	NW_004457297.1	21793	24992	R	ACA1_372600	complement(join(<21793..21958,22063..22144,22238..22388,22454..22570,22663..22797,22899..23022,23187..23249,23332..23425,23511..23596,23678..23851,23951..23985,24013..24075,24170..24410,24544..>24992))	Acanthamoeba castellanii str. Neff	14912802
ACA1_372610	mRNA	ACA1_372610	NW_004457297.1	25290	26523	R	ACA1_372610	complement(join(<25290..25349,25430..25507,25605..25743,25880..25970,26072..26211,26321..>26523))	Acanthamoeba castellanii str. Neff	14912835
ACA1_372620	mRNA	ACA1_372620	NW_004457297.1	26955	28010	R	ACA1_372620	complement(<26955..>28010)	Acanthamoeba castellanii str. Neff	14912836
ACA1_372630	mRNA	ACA1_372630	NW_004457297.1	28431	35712	R	ACA1_372630	complement(join(<28431..29012,29093..29774,29848..29946,30043..30203,30318..30478,30555..30723,30804..31031,31141..31402,31521..31702,31789..31911,31987..32166,32254..32640,32729..32841,32902..32983,33079..33329,33418..33655,33786..33869,33966..34143,34249..34385,34484..34564,34663..34812,34935..35048,35136..35344,35433..35529,35665..>35712))	Acanthamoeba castellanii str. Neff	14912901
ACA1_372640	mRNA	ACA1_372640	NW_004457297.1	36101	36798	D	ACA1_372640	join(<36101..36148,36172..36233,36343..36426,36493..36598,36712..>36798)	Acanthamoeba castellanii str. Neff	14912902
ACA1_372650	mRNA	ACA1_372650	NW_004457297.1	37340	39685	D	ACA1_372650	join(<37340..37470,37539..37653,37719..37801,37891..38002,38078..38207,38302..38399,38504..38677,38705..38846,38928..39087,39138..39471,39668..>39685)	Acanthamoeba castellanii str. Neff	14912824
ACA1_372660	mRNA	ACA1_372660	NW_004457297.1	39656	41535	R	ACA1_372660	complement(join(<39656..39894,39986..40104,40258..40340,40414..40513,40595..41225,41300..41403,41492..>41535))	Acanthamoeba castellanii str. Neff	14912825
ACA1_372680	mRNA	ACA1_372680	NW_004457297.1	54040	57437	D	ACA1_372680	join(<54040..54069,54175..54269,54365..54470,54552..54593,54789..55273,55404..55587,55678..55853,55953..56069,56146..56814,56968..57117,57197..>57437)	Acanthamoeba castellanii str. Neff	14912831
ACA1_372690	mRNA	ACA1_372690	NW_004457297.1	58223	58855	D	ACA1_372690	<58223..>58855	Acanthamoeba castellanii str. Neff	14912832
ACA1_372700	mRNA	ACA1_372700	NW_004457297.1	58984	59603	R	ACA1_372700	complement(join(<58984..59067,59151..59251,59330..59417,59511..>59603))	Acanthamoeba castellanii str. Neff	14912878
ACA1_372720	mRNA	ACA1_372720	NW_004457297.1	61886	64278	D	ACA1_372720	join(<61886..61996,62142..62252,62418..62504,62609..62815,62909..63090,63171..63328,63411..63538,63625..63790,63877..64146,64238..>64278)	Acanthamoeba castellanii str. Neff	14912880
ACA1_372730	mRNA	ACA1_372730	NW_004457297.1	64592	65454	D	ACA1_372730	join(<64592..64925,65002..65123,65260..>65454)	Acanthamoeba castellanii str. Neff	14912881
ACA1_372740	mRNA	ACA1_372740	NW_004457297.1	65969	75387	D	ACA1_372740	join(<65969..65998,66150..66273,66454..66753,66825..67096,67206..67390,67489..67685,67771..68142,68230..68519,68594..68653,68730..68802,68885..68965,69032..69163,69242..69382,69459..69533,69616..70041,70117..70516,70602..70985,71067..71192,71266..71378,71451..71561,71632..71737,71814..71921,71999..72050,72207..72419,72490..72572,72684..72970,73062..73114,73207..73314,73452..73584,73701..73835,73920..74091,74213..74379,74448..74541,74651..74736,75180..75267,75354..>75387)	Acanthamoeba castellanii str. Neff	14912899
ACA1_372850	mRNA	ACA1_372850	NW_004457297.1	75730	78432	D	ACA1_372850	join(<75730..75958,76564..76706,76796..76883,76972..77149,77224..77722,77735..77896,77962..>78432)	Acanthamoeba castellanii str. Neff	14912900
ACA1_373060	mRNA	ACA1_373060	NW_004457297.1	80098	81441	R	ACA1_373060	complement(join(<80098..80340,80624..81016,81103..>81441))	Acanthamoeba castellanii str. Neff	14912852
ACA1_373170	mRNA	ACA1_373170	NW_004457297.1	82247	82622	R	ACA1_373170	complement(join(<82247..82303,82360..82533,82602..>82622))	Acanthamoeba castellanii str. Neff	14912853
ACA1_373280	mRNA	ACA1_373280	NW_004457297.1	84732	85657	R	ACA1_373280	complement(join(<84732..85061,85229..85475,85605..>85657))	Acanthamoeba castellanii str. Neff	14912854
ACA1_373390	mRNA	ACA1_373390	NW_004457297.1	86421	87041	D	ACA1_373390	join(<86421..86442,86467..86525,86661..>87041)	Acanthamoeba castellanii str. Neff	14912859
ACA1_373400	mRNA	ACA1_373400	NW_004457297.1	88743	89422	R	ACA1_373400	complement(join(<88743..88976,89083..89207,89323..>89422))	Acanthamoeba castellanii str. Neff	14912860
ACA1_373430	mRNA	ACA1_373430	NW_004457297.1	92997	95493	R	ACA1_373430	complement(join(<92997..93149,93323..93387,93481..93535,93925..93992,94081..94227,94336..94440,94529..94619,94713..94853,94947..95009,95108..95330,95450..>95493))	Acanthamoeba castellanii str. Neff	14912818
ACA1_373540	mRNA	ACA1_373540	NW_004457297.1	95905	96922	R	ACA1_373540	complement(join(<95905..96177,96302..96518,96834..>96922))	Acanthamoeba castellanii str. Neff	14912819
ACA1_373550	mRNA	ACA1_373550	NW_004457297.1	97237	98670	R	ACA1_373550	complement(join(<97237..97348,97457..97640,97724..97871,97907..98011,98080..98171,98286..>98670))	Acanthamoeba castellanii str. Neff	14912820
ACA1_373560	mRNA	ACA1_373560	NW_004457297.1	98891	100569	R	ACA1_373560	complement(join(<98891..98998,99076..99170,99271..99416,99503..99562,99711..99862,99973..100067,100185..100316,100470..>100569))	Acanthamoeba castellanii str. Neff	14912867
ACA1_373570	mRNA	ACA1_373570	NW_004457297.1	101168	104791	R	ACA1_373570	complement(join(<101168..102829,102931..103146,103220..103425,103507..103657,103747..103841,103912..>104791))	Acanthamoeba castellanii str. Neff	14912868
ACA1_373590	mRNA	ACA1_373590	NW_004457297.1	108667	110156	R	ACA1_373590	complement(join(<108667..109250,109351..109405,109489..109610,109716..109903,110026..>110156))	Acanthamoeba castellanii str. Neff	14912814
ACA1_373600	mRNA	ACA1_373600	NW_004457297.1	110761	113147	R	ACA1_373600	complement(join(<110761..110846,110931..111024,111106..111195,111312..111497,111592..111690,111785..111906,112002..112098,112261..112310,112387..112435,112542..112582,112697..112814,112878..112945,113021..>113147))	Acanthamoeba castellanii str. Neff	14912815
ACA1_373610	mRNA	ACA1_373610	NW_004457297.1	113514	115175	R	ACA1_373610	complement(join(<113514..114110,114224..114501,114592..114671,114746..114855,114959..115100,115112..115142,115169..>115175))	Acanthamoeba castellanii str. Neff	14912816
ACA1_373620	mRNA	ACA1_373620	NW_004457297.1	115725	116367	R	ACA1_373620	complement(join(<115725..115977,116162..>116367))	Acanthamoeba castellanii str. Neff	14912895
ACA1_373630	mRNA	ACA1_373630	NW_004457297.1	116994	118776	R	ACA1_373630	complement(join(<116994..117170,117265..117393,117494..117793,117817..117869,117951..118161,118232..118283,118414..118590,118670..>118776))	Acanthamoeba castellanii str. Neff	14912896
ACA1_373640	mRNA	ACA1_373640	NW_004457297.1	118836	120359	D	ACA1_373640	join(<118836..119625,119650..119724,119748..119801,119819..119961,120078..>120359)	Acanthamoeba castellanii str. Neff	14912865
ACA1_373650	mRNA	ACA1_373650	NW_004457297.1	120574	128582	R	ACA1_373650	complement(join(<120574..120632,120747..120996,121068..121226,121313..121474,121637..121739,121843..121977,122033..122230,122322..122396,122478..122564,122695..122854,122934..123074,123191..123320,123429..123608,123715..123851,123957..124050,124135..124279,124377..124504,124619..124747,124840..124962,125063..125180,125324..125436,125550..125620,125740..125813,125890..126230,126311..126574,126658..126714,126837..126937,127263..127366,127456..127694,127806..127918,128005..128112,128261..128368,128477..>128582))	Acanthamoeba castellanii str. Neff	14912866
ACA1_373660	mRNA	ACA1_373660	NW_004457297.1	130981	134273	D	ACA1_373660	join(<130981..131055,131128..131235,131301..131402,131476..131618,131692..131791,131868..131954,132034..132123,132194..132358,132434..132607,132687..132809,132852..>134273)	Acanthamoeba castellanii str. Neff	14912760
ACA1_373670	mRNA	ACA1_373670	NW_004457297.1	134648	138706	R	ACA1_373670	complement(join(<134648..135074,135217..135328,135436..135615,135715..135795,135887..135965,136051..136122,136260..136395,136484..136550,136662..136786,136886..137036,137131..137264,137444..137540,137653..137789,137937..138234,138403..>138706))	Acanthamoeba castellanii str. Neff	14912840
ACA1_373680	mRNA	ACA1_373680	NW_004457297.1	138896	140735	D	ACA1_373680	join(<138896..138950,139035..139147,139229..139324,139397..139548,139618..139720,139782..139908,139988..140217,140280..140320,140405..140528,140610..>140735)	Acanthamoeba castellanii str. Neff	14912841
ACA1_373690	mRNA	ACA1_373690	NW_004457297.1	140926	143289	D	ACA1_373690	join(<140926..141147,141282..141375,141438..141878,141982..142121,142211..142385,142496..142647,142726..142772,142848..142959,143023..>143289)	Acanthamoeba castellanii str. Neff	14912806
ACA1_373700	mRNA	ACA1_373700	NW_004457297.1	143516	149787	D	ACA1_373700	join(<143516..143702,143805..143873,143940..144067,144182..144388,144469..144583,144666..144856,144959..145107,145194..145292,145367..145466,145573..145756,145852..146040,146138..146281,146370..146534,146634..146822,146960..147216,147287..147414,147499..147793,147858..147969,148076..148449,148541..148657,148846..148932,149002..>149787)	Acanthamoeba castellanii str. Neff	14912807
ACA1_373710	mRNA	ACA1_373710	NW_004457297.1	149881	150060	R	ACA1_373710	complement(<149881..>150060)	Acanthamoeba castellanii str. Neff	14912890
ACA1_373720	mRNA	ACA1_373720	NW_004457297.1	150442	151550	D	ACA1_373720	join(<150442..150693,150764..150914,150998..151268,151391..>151550)	Acanthamoeba castellanii str. Neff	14912808
ACA1_373730	mRNA	ACA1_373730	NW_004457297.1	151711	152557	R	ACA1_373730	complement(join(<151711..152141,152266..152364,152461..>152557))	Acanthamoeba castellanii str. Neff	14912809
ACA1_373740	mRNA	ACA1_373740	NW_004457297.1	153990	157677	R	ACA1_373740	complement(join(<153990..154298,154373..154594,154625..154737,154804..154954,155051..155164,155215..155237,155804..155938,156117..156157,156399..156519,156637..156722,156818..156890,157096..157377,157473..>157677))	Acanthamoeba castellanii str. Neff	14912810
ACA1_373750	mRNA	ACA1_373750	NW_004457297.1	157810	159676	R	ACA1_373750	complement(join(<157810..157926,157997..158099,158338..158476,158570..158708,158784..158942,159047..159219,159334..>159676))	Acanthamoeba castellanii str. Neff	14912870
ACA1_373760	mRNA	ACA1_373760	NW_004457297.1	159808	161213	R	ACA1_373760	complement(join(<159808..159978,160063..160240,160315..160349,160416..160633,160723..160836,160886..>161213))	Acanthamoeba castellanii str. Neff	14912871
ACA1_373780	mRNA	ACA1_373780	NW_004457297.1	165301	165677	R	ACA1_373780	complement(join(<165301..165454,165619..>165677))	Acanthamoeba castellanii str. Neff	14912914
ACA1_373790	mRNA	ACA1_373790	NW_004457297.1	165820	166161	R	ACA1_373790	complement(<165820..>166161)	Acanthamoeba castellanii str. Neff	14912915
ACA1_373800	mRNA	ACA1_373800	NW_004457297.1	167541	167888	R	ACA1_373800	complement(<167541..>167888)	Acanthamoeba castellanii str. Neff	14912882
ACA1_373820	mRNA	ACA1_373820	NW_004457297.1	168936	172104	R	ACA1_373820	complement(join(<168936..169400,169643..169759,169870..169957,170102..170232,170338..170475,170611..170693,170762..170890,170972..171081,171162..171274,171755..171955,172042..>172104))	Acanthamoeba castellanii str. Neff	14912884
ACA1_373830	mRNA	ACA1_373830	NW_004457297.1	172279	173317	D	ACA1_373830	join(<172279..172605,172676..172873,172947..173204,173279..>173317)	Acanthamoeba castellanii str. Neff	14912885
ACA1_373850	mRNA	ACA1_373850	NW_004457297.1	176201	181002	R	ACA1_373850	complement(join(<176201..177011,177096..177348,177471..177765,177862..178018,178167..178294,178385..178559,178668..178824,178918..179068,179168..179323,179421..179498,179587..179649,179730..179841,179960..180039,180170..180723,180747..>181002))	Acanthamoeba castellanii str. Neff	14912777
ACA1_373860	mRNA	ACA1_373860	NW_004457297.1	181809	182735	D	ACA1_373860	join(<181809..182066,182184..182257,182384..182527,182630..>182735)	Acanthamoeba castellanii str. Neff	14912778
ACA1_373870	mRNA	ACA1_373870	NW_004457297.1	183049	183513	D	ACA1_373870	<183049..>183513	Acanthamoeba castellanii str. Neff	14912845
ACA1_373880	mRNA	ACA1_373880	NW_004457297.1	183936	184764	D	ACA1_373880	join(<183936..184073,184145..184404,184470..>184764)	Acanthamoeba castellanii str. Neff	14912846
ACA1_373890	mRNA	ACA1_373890	NW_004457297.1	184859	186261	R	ACA1_373890	complement(join(<184859..185093,185165..185672,185757..185931,186027..186112,186180..>186261))	Acanthamoeba castellanii str. Neff	14912847
ACA1_373900	mRNA	ACA1_373900	NW_004457297.1	186647	187759	D	ACA1_373900	join(<186647..186898,186963..187218,187257..>187759)	Acanthamoeba castellanii str. Neff	14912833
ACA1_373910	mRNA	ACA1_373910	NW_004457297.1	187919	190022	R	ACA1_373910	complement(join(<187919..188100,188172..188274,188359..188522,188596..188745,188851..189021,189116..189202,189301..189417,189490..189505,189537..189633,189737..189926,190013..>190022))	Acanthamoeba castellanii str. Neff	14912834
ACA1_373920	mRNA	ACA1_373920	NW_004457297.1	190368	191462	R	ACA1_373920	complement(join(<190368..190772,190900..191004,191073..191164,191236..191311,191394..>191462))	Acanthamoeba castellanii str. Neff	14912795
ACA1_373930	mRNA	ACA1_373930	NW_004457297.1	191512	192898	R	ACA1_373930	complement(join(<191512..191745,191906..191994,192115..192289,192386..192520,192587..192749,192885..>192898))	Acanthamoeba castellanii str. Neff	14912796
ACA1_373940	mRNA	ACA1_373940	NW_004457297.1	193212	194500	D	ACA1_373940	join(<193212..193306,193409..193587,193666..193774,193885..193985,194072..194193,194282..>194500)	Acanthamoeba castellanii str. Neff	14912797
ACA1_373950	mRNA	ACA1_373950	NW_004457297.1	195316	196515	D	ACA1_373950	join(<195316..195558,195622..>196515)	Acanthamoeba castellanii str. Neff	14912857
ACA1_373960	mRNA	ACA1_373960	NW_004457297.1	196768	197152	R	ACA1_373960	complement(join(<196768..196957,197031..>197152))	Acanthamoeba castellanii str. Neff	14912858
ACA1_373970	mRNA	ACA1_373970	NW_004457297.1	197219	198056	R	ACA1_373970	complement(join(<197219..197391,197486..197616,197678..197879,197930..>198056))	Acanthamoeba castellanii str. Neff	14912784
ACA1_373980	mRNA	ACA1_373980	NW_004457297.1	198385	199787	R	ACA1_373980	complement(join(<198385..198480,198561..199051,199142..199360,199430..>199787))	Acanthamoeba castellanii str. Neff	14912785
ACA1_373990	mRNA	ACA1_373990	NW_004457297.1	199995	201183	D	ACA1_373990	join(<199995..200211,200274..200341,200396..200465,200531..200665,200750..200867,200931..>201183)	Acanthamoeba castellanii str. Neff	14912786
ACA1_374000	mRNA	ACA1_374000	NW_004457297.1	201241	203135	R	ACA1_374000	complement(join(<201241..201432,201508..201548,201614..201889,201972..202068,202226..202305,202391..202552,202630..202782,202925..>203135))	Acanthamoeba castellanii str. Neff	14912768
ACA1_374010	mRNA	ACA1_374010	NW_004457297.1	203187	204142	R	ACA1_374010	complement(join(<203187..203193,203324..203452,203524..203649,203728..203888,203957..>204142))	Acanthamoeba castellanii str. Neff	14912769
ACA1_374020	mRNA	ACA1_374020	NW_004457297.1	204499	206064	R	ACA1_374020	complement(join(<204499..205036,205106..205299,205477..205659,205699..>206064))	Acanthamoeba castellanii str. Neff	14912770
ACA1_374030	mRNA	ACA1_374030	NW_004457297.1	207172	207615	R	ACA1_374030	complement(join(<207172..207274,207401..>207615))	Acanthamoeba castellanii str. Neff	14912757
ACA1_374040	mRNA	ACA1_374040	NW_004457297.1	207646	208647	R	ACA1_374040	complement(join(<207646..207938,208107..>208647))	Acanthamoeba castellanii str. Neff	14912758
ACA1_374050	mRNA	ACA1_374050	NW_004457297.1	209479	209767	D	ACA1_374050	join(<209479..209502,209576..>209767)	Acanthamoeba castellanii str. Neff	14912872
ACA1_374060	mRNA	ACA1_374060	NW_004457297.1	210662	211877	D	ACA1_374060	join(<210662..210753,210839..210967,211027..211108,211189..211357,211426..211490,211584..211682,211767..>211877)	Acanthamoeba castellanii str. Neff	14912873
ACA1_374070	mRNA	ACA1_374070	NW_004457297.1	212849	213718	R	ACA1_374070	complement(join(<212849..212974,213048..213134,213204..213286,213391..213448,213545..>213718))	Acanthamoeba castellanii str. Neff	14912874
ACA1_374080	mRNA	ACA1_374080	NW_004457297.1	214013	216167	R	ACA1_374080	complement(join(<214013..214224,214330..214851,214950..215141,215248..215376,215476..215576,215668..215867,215982..>216167))	Acanthamoeba castellanii str. Neff	14912905
ACA1_374090	mRNA	ACA1_374090	NW_004457297.1	217667	220122	R	ACA1_374090	complement(join(<217667..217721,217800..217870,217961..218127,218207..218321,218417..218538,218618..218679,218885..219048,219124..219247,219314..219401,219470..219595,219678..219853,219944..>220122))	Acanthamoeba castellanii str. Neff	14912906
ACA1_374100	mRNA	ACA1_374100	NW_004457297.1	220762	223751	D	ACA1_374100	join(<220762..220952,221080..221379,221539..221648,221802..222384,222465..222582,222686..222886,222990..>223751)	Acanthamoeba castellanii str. Neff	14912907
ACA1_374110	mRNA	ACA1_374110	NW_004457297.1	224256	227767	D	ACA1_374110	join(<224256..224367,224437..224598,224717..224865,224982..225128,225219..225327,225413..225490,225580..225687,225769..225873,225962..226051,226143..226324,226415..226545,226645..226731,226842..226980,227067..227174,227274..227324,227448..227556,227652..>227767)	Acanthamoeba castellanii str. Neff	14912774
ACA1_374120	mRNA	ACA1_374120	NW_004457297.1	228296	231460	D	ACA1_374120	join(<228296..228858,228967..229068,229181..229356,229448..229535,229633..229759,229852..230009,230126..230187,230269..230355,230459..230608,230683..230810,231028..231140,231247..231307,231452..>231460)	Acanthamoeba castellanii str. Neff	14912775
ACA1_374130	mRNA	ACA1_374130	NW_004457297.1	231893	233356	D	ACA1_374130	join(<231893..232128,232213..>233356)	Acanthamoeba castellanii str. Neff	14912781
ACA1_374140	mRNA	ACA1_374140	NW_004457297.1	233627	237163	D	ACA1_374140	join(<233627..233816,233921..234047,234131..234200,234325..234396,234480..234677,234746..234791,234897..234913,234978..235077,235154..235185,235261..235321,235420..236529,236618..236676,236744..236809,236913..236987,237065..>237163)	Acanthamoeba castellanii str. Neff	14912888
ACA1_374150	mRNA	ACA1_374150	NW_004457297.1	237299	237934	D	ACA1_374150	<237299..>237934	Acanthamoeba castellanii str. Neff	14912889
ACA1_374160	mRNA	ACA1_374160	NW_004457297.1	238323	239108	D	ACA1_374160	join(<238323..238395,238482..238612,238744..238795,238888..>239108)	Acanthamoeba castellanii str. Neff	14912908
ACA1_374170	mRNA	ACA1_374170	NW_004457297.1	240198	240927	R	ACA1_374170	complement(join(<240198..240341,240396..240534,240665..>240927))	Acanthamoeba castellanii str. Neff	14912909
ACA1_374180	mRNA	ACA1_374180	NW_004457297.1	241376	243760	D	ACA1_374180	join(<241376..241473,241643..241833,241928..242006,242220..242617,242850..242923,242997..243089,243241..243292,243395..243512,243610..>243760)	Acanthamoeba castellanii str. Neff	14912910
ACA1_374190	mRNA	ACA1_374190	NW_004457297.1	244100	244926	D	ACA1_374190	join(<244100..244368,244524..244728,244813..>244926)	Acanthamoeba castellanii str. Neff	14912891
ACA1_374200	mRNA	ACA1_374200	NW_004457297.1	245303	246587	D	ACA1_374200	join(<245303..245546,245733..245821,245917..245984,246428..>246587)	Acanthamoeba castellanii str. Neff	14912892
ACA1_374210	mRNA	ACA1_374210	NW_004457297.1	246707	247709	D	ACA1_374210	join(<246707..246728,246915..247099,247182..247287,247405..247533,247618..>247709)	Acanthamoeba castellanii str. Neff	14912893
ACA1_374220	mRNA	ACA1_374220	NW_004457297.1	247818	249949	R	ACA1_374220	complement(join(<247818..247961,248053..248132,248225..248377,248464..248538,248616..248746,248845..248900,248968..249047,249158..249529,249601..>249949))	Acanthamoeba castellanii str. Neff	14912782
ACA1_374230	mRNA	ACA1_374230	NW_004457297.1	250198	250927	D	ACA1_374230	join(<250198..250348,250435..250540,250633..250764,250840..>250927)	Acanthamoeba castellanii str. Neff	14912783
ACA1_374240	mRNA	ACA1_374240	NW_004457297.1	251045	254248	D	ACA1_374240	join(<251045..251069,251167..251283,251357..251453,251542..251612,251939..252093,252170..252216,252324..252424,252531..253081,253195..253482,253577..>254248)	Acanthamoeba castellanii str. Neff	14912903
ACA1_374250	mRNA	ACA1_374250	NW_004457297.1	254312	255778	R	ACA1_374250	complement(join(<254312..254477,254575..254746,254840..255010,255076..255130,255194..255319,255454..255503,255574..>255778))	Acanthamoeba castellanii str. Neff	14912904
ACA1_374260	mRNA	ACA1_374260	NW_004457297.1	255950	257921	D	ACA1_374260	join(<255950..255966,256173..256381,256431..256497,256576..256684,256738..256824,257252..257392,257463..257509,257583..257717,257795..>257921)	Acanthamoeba castellanii str. Neff	14912875
ACA1_374280	mRNA	ACA1_374280	NW_004457297.1	267763	268414	D	ACA1_374280	join(<267763..267913,267954..268032,268045..>268414)	Acanthamoeba castellanii str. Neff	14912877
ACA1_374290	mRNA	ACA1_374290	NW_004457297.1	268488	270615	R	ACA1_374290	complement(join(<268488..268591,268880..269007,269137..269195,269311..269384,269477..269566,269753..269877,270020..270197,270279..270359,270501..>270615))	Acanthamoeba castellanii str. Neff	14912842
ACA1_374300	mRNA	ACA1_374300	NW_004457297.1	270840	271733	R	ACA1_374300	complement(<270840..>271733)	Acanthamoeba castellanii str. Neff	14912843
ACA1_374310	mRNA	ACA1_374310	NW_004457297.1	271923	272927	R	ACA1_374310	complement(join(<271923..272086,272180..272386,272463..272675,272801..>272927))	Acanthamoeba castellanii str. Neff	14912844
ACA1_374320	mRNA	ACA1_374320	NW_004457297.1	273203	274567	R	ACA1_374320	complement(join(<273203..273556,273662..273783,273956..274050,274208..274341,274355..>274567))	Acanthamoeba castellanii str. Neff	14912862
ACA1_374330	mRNA	ACA1_374330	NW_004457297.1	275075	279384	R	ACA1_374330	complement(join(<275075..275944,276061..276187,276200..276247,276334..276473,276583..276852,276930..277366,277482..277938,278024..279228,279363..>279384))	Acanthamoeba castellanii str. Neff	14912863
ACA1_374340	mRNA	ACA1_374340	NW_004457297.1	280138	281807	D	ACA1_374340	join(<280138..280851,280926..>281807)	Acanthamoeba castellanii str. Neff	14912864
ACA1_374350	mRNA	ACA1_374350	NW_004457297.1	281913	283701	D	ACA1_374350	join(<281913..282017,282103..282853,282947..283198,283310..>283701)	Acanthamoeba castellanii str. Neff	14912811
ACA1_374360	mRNA	ACA1_374360	NW_004457297.1	284188	284943	D	ACA1_374360	<284188..>284943	Acanthamoeba castellanii str. Neff	14912812
ACA1_374370	mRNA	ACA1_374370	NW_004457297.1	286536	286913	R	ACA1_374370	complement(join(<286536..286577,286662..>286913))	Acanthamoeba castellanii str. Neff	14912826
ACA1_374380	mRNA	ACA1_374380	NW_004457297.1	287247	289214	R	ACA1_374380	complement(join(<287247..287344,287368..287378,287401..287927,287982..>289214))	Acanthamoeba castellanii str. Neff	14912827
ACA1_374390	mRNA	ACA1_374390	NW_004457297.1	290437	291413	D	ACA1_374390	join(<290437..290630,290866..290927,291292..>291413)	Acanthamoeba castellanii str. Neff	14912828
ACA1_374400	mRNA	ACA1_374400	NW_004457297.1	291517	292376	R	ACA1_374400	complement(join(<291517..291622,291710..292137,292293..>292376))	Acanthamoeba castellanii str. Neff	14912829
ACA1_374410	mRNA	ACA1_374410	NW_004457297.1	292613	295303	R	ACA1_374410	complement(join(<292613..292926,293001..293225,293321..293520,293621..293891,293998..294088,294179..294252,294385..294594,294690..295037,295249..>295303))	Acanthamoeba castellanii str. Neff	14912911
ACA1_374420	mRNA	ACA1_374420	NW_004457297.1	295357	295794	R	ACA1_374420	complement(join(<295357..295551,295618..>295794))	Acanthamoeba castellanii str. Neff	14912912
ACA1_374430	mRNA	ACA1_374430	NW_004457297.1	296355	298005	R	ACA1_374430	complement(join(<296355..296537,296633..297289,297400..>298005))	Acanthamoeba castellanii str. Neff	14912848
ACA1_374440	mRNA	ACA1_374440	NW_004457297.1	298595	300992	D	ACA1_374440	join(<298595..298812,299034..299167,299241..299371,299438..299532,299613..299799,299870..300077,300157..300240,300324..300415,300490..300603,300709..300834,300924..>300992)	Acanthamoeba castellanii str. Neff	14912849
ACA1_374450	mRNA	ACA1_374450	NW_004457297.1	301995	303455	D	ACA1_374450	join(<301995..302456,302589..>303455)	Acanthamoeba castellanii str. Neff	14912850
ACA1_374460	mRNA	ACA1_374460	NW_004457297.1	303663	305821	D	ACA1_374460	join(<303663..303887,304101..304234,304391..304484,304564..304656,304725..305059,305165..305296,305389..305479,305597..>305821)	Acanthamoeba castellanii str. Neff	14912855
ACA1_374470	mRNA	ACA1_374470	NW_004457297.1	305965	306530	R	ACA1_374470	complement(join(<305965..306358,306445..>306530))	Acanthamoeba castellanii str. Neff	14912856
ACA1_374480	mRNA	ACA1_374480	NW_004457297.1	307635	310569	D	ACA1_374480	join(<307635..307711,307784..307873,307972..308103,308413..308490,308617..309567,309580..309899,309988..310367,310453..>310569)	Acanthamoeba castellanii str. Neff	14912821
ACA1_374490	mRNA	ACA1_374490	NW_004457297.1	310773	311158	D	ACA1_374490	join(<310773..310899,311007..>311158)	Acanthamoeba castellanii str. Neff	14912822
ACA1_374500	mRNA	ACA1_374500	NW_004457297.1	311730	312609	D	ACA1_374500	join(<311730..311878,311895..>312609)	Acanthamoeba castellanii str. Neff	14912823
ACA1_374510	mRNA	ACA1_374510	NW_004457297.1	313073	313379	D	ACA1_374510	join(<313073..313099,313203..>313379)	Acanthamoeba castellanii str. Neff	14912763
ACA1_374520	mRNA	ACA1_374520	NW_004457297.1	313790	314122	R	ACA1_374520	complement(<313790..>314122)	Acanthamoeba castellanii str. Neff	14912764
ACA1_374530	mRNA	ACA1_374530	NW_004457297.1	314545	316750	R	ACA1_374530	complement(join(<314545..314579,314653..314914,314982..315082,315168..315329,315430..315530,315603..315748,315825..315907,316058..316365,316431..316497,316576..>316750))	Acanthamoeba castellanii str. Neff	14912765
ACA1_374540	mRNA	ACA1_374540	NW_004457297.1	316914	318540	R	ACA1_374540	complement(join(<316914..317312,317338..317436,317580..317754,317861..318221,318294..>318540))	Acanthamoeba castellanii str. Neff	14912791
ACA1_374550	mRNA	ACA1_374550	NW_004457297.1	318684	321165	D	ACA1_374550	join(<318684..318998,319135..319240,319343..319486,319565..319727,319800..319930,320042..320176,320254..320358,320455..320581,320695..320808,320891..320974,321063..>321165)	Acanthamoeba castellanii str. Neff	14912792
ACA1_374560	mRNA	ACA1_374560	NW_004457297.1	322133	322623	D	ACA1_374560	join(<322133..322448,322472..>322623)	Acanthamoeba castellanii str. Neff	14912793
ACA1_374570	mRNA	ACA1_374570	NW_004457297.1	323567	328393	D	ACA1_374570	join(<323567..323662,323785..323924,324026..325085,325160..325249,325339..325426,325507..325667,325707..325795,325876..325996,326064..326154,326226..326351,326490..326634,326689..327355,327492..327588,327685..327796,327878..328034,328187..>328393)	Acanthamoeba castellanii str. Neff	14912766
ACA1_374580	mRNA	ACA1_374580	NW_004457297.1	328481	330554	D	ACA1_374580	join(<328481..328616,328686..329144,329224..329334,329409..329492,329594..329742,329829..329981,330059..330151,330255..330374,330465..>330554)	Acanthamoeba castellanii str. Neff	14912767
ACA1_374590	mRNA	ACA1_374590	NW_004457297.1	330632	332884	D	ACA1_374590	join(<330632..330839,330942..331008,331082..331177,331277..331380,331495..331619,331693..331838,331919..332019,332145..332312,332386..332435,332642..>332884)	Acanthamoeba castellanii str. Neff	14912761
ACA1_374600	mRNA	ACA1_374600	NW_004457297.1	333371	336229	D	ACA1_374600	join(<333371..333559,333654..333693,333914..334021,334114..334953,335235..>336229)	Acanthamoeba castellanii str. Neff	14912762
ACA1_374620	mRNA	ACA1_374620	NW_004457297.1	339202	342773	D	ACA1_374620	join(<339202..339299,339421..339506,339582..339986,340166..340465,340543..340596,340743..340871,340961..341176,341276..341410,341518..341630,341698..341849,341976..342084,342173..342275,342356..342515,342617..>342773)	Acanthamoeba castellanii str. Neff	14912838
ACA1_374630	mRNA	ACA1_374630	NW_004457297.1	342907	344125	R	ACA1_374630	complement(join(<342907..343033,343105..343211,343305..343435,343517..343715,343806..343970,344066..>344125))	Acanthamoeba castellanii str. Neff	14912839
ACA1_374640	mRNA	ACA1_374640	NW_004457297.1	344557	346792	D	ACA1_374640	join(<344557..344680,344779..344802,344835..344986,345112..345370,345460..345572,345652..345776,345871..346455,346600..>346792)	Acanthamoeba castellanii str. Neff	14912800
ACA1_374650	mRNA	ACA1_374650	NW_004457297.1	346973	353874	D	ACA1_374650	join(<346973..346999,347210..347369,347519..347580,347658..347729,347871..347996,348104..348292,348375..348458,348570..348692,348799..348993,349081..349165,349268..349365,349451..349572,349697..349760,349869..350061,350237..350361,350440..350515,350592..350780,350895..351047,351185..351283,351396..351473,351595..351723,351802..351921,352086..352231,352331..352431,352510..352664,352755..352803,352876..353276,353384..353496,353587..353703,353809..>353874)	Acanthamoeba castellanii str. Neff	14912801
ACA1_374660	mRNA	ACA1_374660	NW_004457297.1	354518	362536	D	ACA1_374660	join(<354518..354598,354697..354745,354852..355001,355097..355293,355375..355720,355812..355879,355957..356574,356695..356867,357030..357214,357288..357393,357473..357575,357649..357790,357872..358257,358338..358444,358547..358658,358746..359511,359644..360525,360586..360676,360757..360842,360935..361152,361245..361482,361575..361704,361793..361896,362018..362157,362270..362331,362395..>362536)	Acanthamoeba castellanii str. Neff	14912794
ACA1_374670	mRNA	ACA1_374670	NW_004457297.1	362606	364176	R	ACA1_374670	complement(join(<362606..362935,363079..363325,363433..363659,363793..363942,364039..>364176))	Acanthamoeba castellanii str. Neff	14912787
ACA1_374680	mRNA	ACA1_374680	NW_004457297.1	364940	365679	R	ACA1_374680	complement(join(<364940..365149,365482..>365679))	Acanthamoeba castellanii str. Neff	14912779
ACA1_374690	mRNA	ACA1_374690	NW_004457297.1	368603	370776	R	ACA1_374690	complement(join(<368603..369864,369958..370461,370551..>370776))	Acanthamoeba castellanii str. Neff	14912780
ACA1_374700	mRNA	ACA1_374700	NW_004457297.1	370866	371681	R	ACA1_374700	complement(join(<370866..371035,371100..371212,371266..>371681))	Acanthamoeba castellanii str. Neff	14912788
ACA1_374710	mRNA	ACA1_374710	NW_004457297.1	371780	374147	D	ACA1_374710	join(<371780..371814,371956..372101,372225..372326,372630..372778,372863..372985,373053..373092,373191..373306,373396..373518,373592..373717,373780..373876,373942..374029,374114..>374147)	Acanthamoeba castellanii str. Neff	14912789
ACA1_374720	mRNA	ACA1_374720	NW_004457297.1	375777	380552	D	ACA1_374720	join(<375777..376077,376170..376328,376486..376769,376879..377128,377235..377397,377493..377620,377698..377832,377930..378054,378126..378236,378298..378306,378429..378588,378699..378845,378932..379347,379462..379585,379762..379911,379999..>380552)	Acanthamoeba castellanii str. Neff	14912790
ACA1_374730	mRNA	ACA1_374730	NW_004457297.1	381250	382790	R	ACA1_374730	complement(join(<381250..381579,381728..381974,382100..382269,382392..382541,382653..>382790))	Acanthamoeba castellanii str. Neff	14912798
ACA1_374740	mRNA	ACA1_374740	NW_004457297.1	383585	385481	D	ACA1_374740	join(<383585..383888,383987..384145,384318..384598,384887..384990,385063..385223,385297..>385481)	Acanthamoeba castellanii str. Neff	14912799
ACA1_374950	mRNA	ACA1_374950	NW_004457297.1	388247	390239	D	ACA1_374950	join(<388247..388550,388619..388777,388955..389241,389387..389629,389736..>390239)	Acanthamoeba castellanii str. Neff	14912803
ACA1_375060	mRNA	ACA1_375060	NW_004457297.1	391648	392296	D	ACA1_375060	join(<391648..391676,391690..391725,391859..391976,392024..392110,392171..>392296)	Acanthamoeba castellanii str. Neff	14912804
ACA1_375070	mRNA	ACA1_375070	NW_004457297.1	393280	394849	D	ACA1_375070	join(<393280..393456,393735..393794,393891..393978,394059..394236,394304..394368,394515..>394849)	Acanthamoeba castellanii str. Neff	14912771
ACA1_375280	mRNA	ACA1_375280	NW_004457297.1	397129	399854	D	ACA1_375280	join(<397129..397184,397275..397375,397468..397869,397963..399104,399286..399508,399602..399654,399747..>399854)	Acanthamoeba castellanii str. Neff	14912772
ACA1_375490	mRNA	ACA1_375490	NW_004457297.1	400672	401734	D	ACA1_375490	join(<400672..400742,400813..400978,401036..401179,401282..401398,401642..>401734)	Acanthamoeba castellanii str. Neff	14912773
ACA1_375600	mRNA	ACA1_375600	NW_004457297.1	404572	408723	D	ACA1_375600	join(<404572..404688,404784..404833,404915..404999,405048..405148,405267..405348,407314..407797,407880..408018,408087..408417,408526..>408723)	Acanthamoeba castellanii str. Neff	14912897
ACA1_375710	mRNA	ACA1_375710	NW_004457297.1	409276	410039	D	ACA1_375710	join(<409276..409370,409439..>410039)	Acanthamoeba castellanii str. Neff	14912898
ACA1_001510	mRNA	ACA1_001510	NW_004457296.1	458	727	R	ACA1_001510	complement(<458..>727)	Acanthamoeba castellanii str. Neff	14912756
ACA1_001520	mRNA	ACA1_001520	NW_004457296.1	964	2127	R	ACA1_001520	complement(join(<964..1081,1187..1311,1400..1497,1591..1721,1832..1925,2052..>2127))	Acanthamoeba castellanii str. Neff	14912751
ACA1_001530	mRNA	ACA1_001530	NW_004457296.1	2254	5510	R	ACA1_001530	complement(join(<2254..3006,3155..3630,3651..3684,3710..4939,5112..5255,5280..>5510))	Acanthamoeba castellanii str. Neff	14912752
ACA1_001540	mRNA	ACA1_001540	NW_004457296.1	5552	7610	R	ACA1_001540	complement(join(<5552..6742,6806..7102,7208..7452,7550..>7610))	Acanthamoeba castellanii str. Neff	14912755
ACA1_001550	mRNA	ACA1_001550	NW_004457296.1	7881	8312	R	ACA1_001550	complement(join(<7881..8191,8273..>8312))	Acanthamoeba castellanii str. Neff	14912753
ACA1_002730	mRNA	ACA1_002730	NW_004457295.1	119	596	R	ACA1_002730	complement(join(<119..180,210..484,559..>596))	Acanthamoeba castellanii str. Neff	14912744
ACA1_002740	mRNA	ACA1_002740	NW_004457295.1	1046	3820	R	ACA1_002740	complement(join(<1046..1150,1223..1870,1941..2027,2097..2681,2766..3352,3423..3579,3653..>3820))	Acanthamoeba castellanii str. Neff	14912746
ACA1_002750	mRNA	ACA1_002750	NW_004457295.1	3967	5459	R	ACA1_002750	complement(join(<3967..4212,4285..4387,4460..4567,4631..4710,4744..4886,4975..5164,5233..5307,5394..>5459))	Acanthamoeba castellanii str. Neff	14912745
ACA1_002760	mRNA	ACA1_002760	NW_004457295.1	5692	6342	D	ACA1_002760	join(<5692..5713,5799..5959,6026..6092,6155..>6342)	Acanthamoeba castellanii str. Neff	14912747
ACA1_002770	mRNA	ACA1_002770	NW_004457295.1	6737	9086	D	ACA1_002770	join(<6737..7133,7204..7296,7426..7507,7598..7793,7901..8001,8087..8154,8224..8339,8428..8692,8786..8946,9024..>9086)	Acanthamoeba castellanii str. Neff	14912749
ACA1_002780	mRNA	ACA1_002780	NW_004457295.1	9289	10553	R	ACA1_002780	complement(join(<9289..9646,9733..9820,9887..9977,10057..10127,10210..10359,10445..>10553))	Acanthamoeba castellanii str. Neff	14912748
ACA1_002790	mRNA	ACA1_002790	NW_004457295.1	10670	12774	D	ACA1_002790	join(<10670..10858,10960..11409,11496..11727,11798..>12774)	Acanthamoeba castellanii str. Neff	14912750
ACA1_016580	mRNA	ACA1_016580	NW_004457294.1	622	986	D	ACA1_016580	join(<622..691,797..937,973..>986)	Acanthamoeba castellanii str. Neff	14912743
ACA1_016690	mRNA	ACA1_016690	NW_004457294.1	4122	6932	R	ACA1_016690	complement(join(<4122..4326,4396..4754,5182..5742,5834..5923,5997..6092,6180..6343,6409..6467,6554..6686,6757..6838,6909..>6932))	Acanthamoeba castellanii str. Neff	14912741
ACA1_016900	mRNA	ACA1_016900	NW_004457294.1	10088	10426	R	ACA1_016900	complement(<10088..>10426)	Acanthamoeba castellanii str. Neff	14912742
ACA1_026960	mRNA	ACA1_026960	NW_004457293.1	25	5813	R	ACA1_026960	complement(join(<25..210,309..419,530..634,714..910,990..1137,1237..1280,1431..1497,1579..1696,1791..1880,1959..2170,2270..2380,2494..2584,2672..2772,2858..3187,3307..3441,3532..3632,3717..3876,3947..4014,4100..4235,4323..4463,4562..4613,4796..4852,4944..4996,5074..5152,5244..5386,5430..5468,5479..5648,5747..>5813))	Acanthamoeba castellanii str. Neff	14912738
ACA1_026970	mRNA	ACA1_026970	NW_004457293.1	6525	6908	D	ACA1_026970	<6525..>6908	Acanthamoeba castellanii str. Neff	14912740
ACA1_026980	mRNA	ACA1_026980	NW_004457293.1	7270	7920	D	ACA1_026980	join(<7270..7515,7602..7697,7825..>7920)	Acanthamoeba castellanii str. Neff	14912733
ACA1_026990	mRNA	ACA1_026990	NW_004457293.1	8080	13727	R	ACA1_026990	complement(join(<8080..8313,8404..8692,8772..8910,9000..9960,10065..10262,10353..10552,10661..11014,11096..11270,11350..11532,11543..11668,11756..12062,12132..12202,12271..12512,12588..13527,13602..>13727))	Acanthamoeba castellanii str. Neff	14912734
ACA1_027000	mRNA	ACA1_027000	NW_004457293.1	14402	17524	R	ACA1_027000	complement(join(<14402..14582,14664..14841,14930..14984,15096..15155,15317..15453,15543..16239,16360..17084,17180..17290,17476..>17524))	Acanthamoeba castellanii str. Neff	14912739
ACA1_027010	mRNA	ACA1_027010	NW_004457293.1	17765	19339	R	ACA1_027010	complement(join(<17765..18826,18845..>19339))	Acanthamoeba castellanii str. Neff	14912732
ACA1_027020	mRNA	ACA1_027020	NW_004457293.1	19884	25442	D	ACA1_027020	join(<19884..19979,20060..20360,20441..21079,21156..21480,21550..21856,21943..22068,22149..22268,22366..22894,22984..23183,23267..23464,23562..24507,24606..24744,24825..25113,25209..>25442)	Acanthamoeba castellanii str. Neff	14912735
ACA1_027030	mRNA	ACA1_027030	NW_004457293.1	25535	28348	R	ACA1_027030	complement(join(<25535..25715,25842..26015,26090..26193,26270..26384,26482..26564,26657..26788,26854..26957,27122..27235,27353..27463,27547..27590,27665..27743,27841..27978,28087..28167,28279..>28348))	Acanthamoeba castellanii str. Neff	14912736
ACA1_027040	mRNA	ACA1_027040	NW_004457293.1	28439	31403	R	ACA1_027040	complement(join(<28439..28846,28892..29015,29101..29228,29349..29448,29529..29645,29723..29840,29918..30389,30467..30637,30721..30857,30924..30990,31062..31132,31253..>31403))	Acanthamoeba castellanii str. Neff	14912731
ACA1_027050	mRNA	ACA1_027050	NW_004457293.1	31859	32687	R	ACA1_027050	complement(join(<31859..31980,32065..32148,32220..32526,32634..>32687))	Acanthamoeba castellanii str. Neff	14912737
ACA1_031010	mRNA	ACA1_031010	NW_004457292.1	917	3220	D	ACA1_031010	join(<917..991,1280..1355,1423..1495,1624..1667,1757..1836,1926..2027,2137..2239,2355..2535,2616..2694,2843..2925,3133..>3220)	Acanthamoeba castellanii str. Neff	14912720
ACA1_031020	mRNA	ACA1_031020	NW_004457292.1	3721	4399	D	ACA1_031020	join(<3721..3765,3845..4095,4210..>4399)	Acanthamoeba castellanii str. Neff	14912724
ACA1_031130	mRNA	ACA1_031130	NW_004457292.1	5238	5450	R	ACA1_031130	complement(<5238..>5450)	Acanthamoeba castellanii str. Neff	14912725
ACA1_031140	mRNA	ACA1_031140	NW_004457292.1	6769	7311	D	ACA1_031140	join(<6769..6849,6931..>7311)	Acanthamoeba castellanii str. Neff	14912726
ACA1_031150	mRNA	ACA1_031150	NW_004457292.1	7875	8504	D	ACA1_031150	join(<7875..7955,8289..>8504)	Acanthamoeba castellanii str. Neff	14912730
ACA1_031270	mRNA	ACA1_031270	NW_004457292.1	12676	14732	D	ACA1_031270	join(<12676..12924,12986..13258,13348..13438,13543..13632,13692..13798,13879..14004,14070..14199,14271..14366,14437..>14732)	Acanthamoeba castellanii str. Neff	14912728
ACA1_031380	mRNA	ACA1_031380	NW_004457292.1	17250	17944	R	ACA1_031380	complement(join(<17250..17365,17419..>17944))	Acanthamoeba castellanii str. Neff	14912729
ACA1_031390	mRNA	ACA1_031390	NW_004457292.1	18241	19593	D	ACA1_031390	join(<18241..18400,18547..18698,18796..18909,19030..19243,19343..>19593)	Acanthamoeba castellanii str. Neff	14912722
ACA1_031400	mRNA	ACA1_031400	NW_004457292.1	19706	20834	R	ACA1_031400	complement(join(<19706..20052,20123..20174,20285..20398,20466..>20834))	Acanthamoeba castellanii str. Neff	14912723
ACA1_031410	mRNA	ACA1_031410	NW_004457292.1	21120	21419	D	ACA1_031410	<21120..>21419	Acanthamoeba castellanii str. Neff	14912721
ACA1_033140	mRNA	ACA1_033140	NW_004457291.1	388	2015	D	ACA1_033140	join(<388..639,784..897,997..1121,1227..1422,1709..1896,1970..>2015)	Acanthamoeba castellanii str. Neff	14912677
ACA1_033250	mRNA	ACA1_033250	NW_004457291.1	2334	2666	R	ACA1_033250	complement(<2334..>2666)	Acanthamoeba castellanii str. Neff	14912691
ACA1_033360	mRNA	ACA1_033360	NW_004457291.1	2875	3496	D	ACA1_033360	join(<2875..3013,3093..>3496)	Acanthamoeba castellanii str. Neff	14912678
ACA1_033370	mRNA	ACA1_033370	NW_004457291.1	3627	5925	R	ACA1_033370	complement(join(<3627..4232,4326..4444,4506..4604,4755..4846,4935..5029,5074..5151,5292..5483,5603..5691,5721..>5925))	Acanthamoeba castellanii str. Neff	14912679
ACA1_033380	mRNA	ACA1_033380	NW_004457291.1	6274	8556	D	ACA1_033380	join(<6274..6525,6647..6745,6863..6987,7124..7319,7421..7644,7756..7980,8052..8251,8378..>8556)	Acanthamoeba castellanii str. Neff	14912708
ACA1_033390	mRNA	ACA1_033390	NW_004457291.1	9081	10316	R	ACA1_033390	complement(join(<9081..9364,9467..9691,9804..9864,9944..10065,10139..>10316))	Acanthamoeba castellanii str. Neff	14912709
ACA1_033400	mRNA	ACA1_033400	NW_004457291.1	10459	13080	R	ACA1_033400	complement(join(<10459..10601,10634..10716,10792..10941,11024..11187,11281..11418,11490..11642,11724..11882,11969..12088,12158..12271,12311..12589,12667..12839,12903..>13080))	Acanthamoeba castellanii str. Neff	14912700
ACA1_033410	mRNA	ACA1_033410	NW_004457291.1	13562	14271	R	ACA1_033410	complement(join(<13562..13887,13959..14006,14058..>14271))	Acanthamoeba castellanii str. Neff	14912701
ACA1_033420	mRNA	ACA1_033420	NW_004457291.1	14539	14988	R	ACA1_033420	complement(join(<14539..14742,14863..>14988))	Acanthamoeba castellanii str. Neff	14912692
ACA1_033430	mRNA	ACA1_033430	NW_004457291.1	15778	17046	D	ACA1_033430	join(<15778..15956,16068..16169,16266..16373,16468..16712,16805..>17046)	Acanthamoeba castellanii str. Neff	14912693
ACA1_033440	mRNA	ACA1_033440	NW_004457291.1	17209	18069	D	ACA1_033440	<17209..>18069	Acanthamoeba castellanii str. Neff	14912686
ACA1_033450	mRNA	ACA1_033450	NW_004457291.1	18355	20868	D	ACA1_033450	join(<18355..18953,19031..19152,19236..19325,19400..>20868)	Acanthamoeba castellanii str. Neff	14912687
ACA1_033460	mRNA	ACA1_033460	NW_004457291.1	20963	21265	D	ACA1_033460	<20963..>21265	Acanthamoeba castellanii str. Neff	14912688
ACA1_033470	mRNA	ACA1_033470	NW_004457291.1	21336	21569	R	ACA1_033470	complement(<21336..>21569)	Acanthamoeba castellanii str. Neff	14912694
ACA1_033480	mRNA	ACA1_033480	NW_004457291.1	21667	22809	D	ACA1_033480	join(<21667..22018,22160..22254,22319..22478,22613..>22809)	Acanthamoeba castellanii str. Neff	14912695
ACA1_033490	mRNA	ACA1_033490	NW_004457291.1	23379	24974	D	ACA1_033490	<23379..>24974	Acanthamoeba castellanii str. Neff	14912696
ACA1_033500	mRNA	ACA1_033500	NW_004457291.1	25294	30299	D	ACA1_033500	join(<25294..25516,25628..26072,26186..26313,26399..26556,26619..26787,26917..27310,27436..27558,27654..27763,27863..27975,28067..28156,28239..28365,28491..28646,28715..28761,28889..28997,29078..29178,29254..29294,29389..29545,29662..29743,29842..29906,30015..30110,30174..>30299)	Acanthamoeba castellanii str. Neff	14912697
ACA1_033510	mRNA	ACA1_033510	NW_004457291.1	30368	31329	D	ACA1_033510	join(<30368..30541,30663..30746,30855..31031,31171..>31329)	Acanthamoeba castellanii str. Neff	14912702
ACA1_033520	mRNA	ACA1_033520	NW_004457291.1	31763	32200	R	ACA1_033520	complement(join(<31763..31931,31995..32062,32129..>32200))	Acanthamoeba castellanii str. Neff	14912674
ACA1_033530	mRNA	ACA1_033530	NW_004457291.1	32531	33096	D	ACA1_033530	join(<32531..32667,32760..>33096)	Acanthamoeba castellanii str. Neff	14912675
ACA1_033540	mRNA	ACA1_033540	NW_004457291.1	33504	36910	D	ACA1_033540	join(<33504..34269,34396..34754,34862..35017,35114..35561,35691..>36910)	Acanthamoeba castellanii str. Neff	14912676
ACA1_033550	mRNA	ACA1_033550	NW_004457291.1	37087	39503	D	ACA1_033550	join(<37087..37291,37362..37451,37527..37622,37773..37905,38006..38198,38310..38549,38659..38755,38882..38988,39058..39170,39251..>39503)	Acanthamoeba castellanii str. Neff	14912714
ACA1_033560	mRNA	ACA1_033560	NW_004457291.1	39717	42936	R	ACA1_033560	complement(join(<39717..39738,39774..40884,40947..41415,41584..41739,41844..42202,42303..>42936))	Acanthamoeba castellanii str. Neff	14912715
ACA1_033570	mRNA	ACA1_033570	NW_004457291.1	43195	45581	R	ACA1_033570	complement(join(<43195..43447,43560..43672,43758..43864,43965..44301,44451..44643,44775..44907,45024..45149,45209..45298,45410..>45581))	Acanthamoeba castellanii str. Neff	14912716
ACA1_033580	mRNA	ACA1_033580	NW_004457291.1	45713	48000	R	ACA1_033580	complement(join(<45713..46500,46846..47464,47575..47825,47934..>48000))	Acanthamoeba castellanii str. Neff	14912689
ACA1_033590	mRNA	ACA1_033590	NW_004457291.1	48218	51052	R	ACA1_033590	complement(join(<48218..48303,48396..48497,48562..48726,48813..49010,49100..49260,49336..49506,49588..49718,49787..49926,50002..50161,50248..50384,50475..50611,50686..50824,50914..>51052))	Acanthamoeba castellanii str. Neff	14912690
ACA1_033600	mRNA	ACA1_033600	NW_004457291.1	52221	57375	D	ACA1_033600	join(<52221..52281,52346..52525,52587..52723,52803..52871,52954..53061,53138..53268,53637..53734,53757..53772,53832..53948,54036..54141,54216..54358,54425..54491,54575..54678,54970..55264,55328..55815,55851..56103,56206..56315,56385..56510,56582..56695,56775..57060,57202..>57375)	Acanthamoeba castellanii str. Neff	14912683
ACA1_033610	mRNA	ACA1_033610	NW_004457291.1	57571	61176	D	ACA1_033610	join(<57571..57690,57821..57895,57986..58270,58353..58589,58671..58769,58850..58974,59115..59245,59320..59644,59714..59850,60064..60232,60295..60411,60506..60645,60733..60882,60971..>61176)	Acanthamoeba castellanii str. Neff	14912684
ACA1_033620	mRNA	ACA1_033620	NW_004457291.1	61424	62405	R	ACA1_033620	complement(join(<61424..61816,62232..>62405))	Acanthamoeba castellanii str. Neff	14912703
ACA1_033630	mRNA	ACA1_033630	NW_004457291.1	62673	63844	R	ACA1_033630	complement(join(<62673..62789,62879..62958,63038..63254,63285..63376,63535..>63844))	Acanthamoeba castellanii str. Neff	14912698
ACA1_033640	mRNA	ACA1_033640	NW_004457291.1	64037	66289	D	ACA1_033640	join(<64037..64117,64235..64360,64476..64531,64675..64826,64906..65074,65179..65327,65482..65621,65744..65989,66122..66140,66213..>66289)	Acanthamoeba castellanii str. Neff	14912699
ACA1_033650	mRNA	ACA1_033650	NW_004457291.1	66569	67075	D	ACA1_033650	join(<66569..66643,66947..>67075)	Acanthamoeba castellanii str. Neff	14912680
ACA1_033660	mRNA	ACA1_033660	NW_004457291.1	68139	69726	D	ACA1_033660	join(<68139..68155,68324..68549,68758..68862,68961..69110,69211..69375,69490..>69726)	Acanthamoeba castellanii str. Neff	14912681
ACA1_033670	mRNA	ACA1_033670	NW_004457291.1	70045	71968	D	ACA1_033670	join(<70045..70076,70333..70419,70534..70628,70763..71023,71108..71292,71415..71656,71770..71819,71892..>71968)	Acanthamoeba castellanii str. Neff	14912682
ACA1_033680	mRNA	ACA1_033680	NW_004457291.1	73662	74367	R	ACA1_033680	complement(join(<73662..73755,74026..74100,74189..>74367))	Acanthamoeba castellanii str. Neff	14912718
ACA1_033700	mRNA	ACA1_033700	NW_004457291.1	76631	77929	D	ACA1_033700	join(<76631..76674,76796..76875,77025..77131,77221..77779,77907..>77929)	Acanthamoeba castellanii str. Neff	14912710
ACA1_033720	mRNA	ACA1_033720	NW_004457291.1	113834	115007	D	ACA1_033720	join(<113834..114074,114295..114329,114431..114606,114703..114752,114856..>115007)	Acanthamoeba castellanii str. Neff	14912712
ACA1_033730	mRNA	ACA1_033730	NW_004457291.1	115316	116591	D	ACA1_033730	join(<115316..115667,115767..115888,116132..116204,116287..>116591)	Acanthamoeba castellanii str. Neff	14912713
ACA1_033740	mRNA	ACA1_033740	NW_004457291.1	116786	117300	R	ACA1_033740	complement(join(<116786..116792,116990..>117300))	Acanthamoeba castellanii str. Neff	14912704
ACA1_033760	mRNA	ACA1_033760	NW_004457291.1	123525	126016	D	ACA1_033760	join(<123525..123596,123896..124008,124108..124198,124296..124372,124451..124593,124675..124796,124873..124984,125068..125119,125193..125404,125491..125654,125770..125899,125973..>126016)	Acanthamoeba castellanii str. Neff	14912706
ACA1_033770	mRNA	ACA1_033770	NW_004457291.1	126489	130878	D	ACA1_033770	join(<126489..127553,127698..127859,127917..128633,128731..129392,129501..129571,129656..129846,129980..130105,130184..130305,130404..130509,130598..130714,130804..>130878)	Acanthamoeba castellanii str. Neff	14912707
ACA1_033780	mRNA	ACA1_033780	NW_004457291.1	131212	132499	R	ACA1_033780	complement(join(<131212..131366,131463..131628,131720..>132499))	Acanthamoeba castellanii str. Neff	14912717
ACA1_033790	mRNA	ACA1_033790	NW_004457291.1	132809	134376	R	ACA1_033790	complement(join(<132809..132855,132935..133307,133921..>134376))	Acanthamoeba castellanii str. Neff	14912685
ACA1_039970	mRNA	ACA1_039970	NW_004457290.1	6203	6517	D	ACA1_039970	join(<6203..6367,6398..>6517)	Acanthamoeba castellanii str. Neff	14912672
ACA1_039980	mRNA	ACA1_039980	NW_004457290.1	7345	8366	D	ACA1_039980	join(<7345..7403,7524..7590,7680..7799,8078..8181,8279..>8366)	Acanthamoeba castellanii str. Neff	14912668
ACA1_040190	mRNA	ACA1_040190	NW_004457290.1	9285	10940	R	ACA1_040190	complement(join(<9285..9333,9412..9503,9598..9674,9749..9798,9865..10064,10177..10610,10676..>10940))	Acanthamoeba castellanii str. Neff	14912670
ACA1_040200	mRNA	ACA1_040200	NW_004457290.1	11047	12857	R	ACA1_040200	complement(join(<11047..11631,11643..11809,11865..12089,12166..12299,12381..12471,12540..12629,12776..>12857))	Acanthamoeba castellanii str. Neff	14912671
ACA1_040210	mRNA	ACA1_040210	NW_004457290.1	13766	14901	D	ACA1_040210	join(<13766..13868,13937..14092,14168..14350,14438..>14901)	Acanthamoeba castellanii str. Neff	14912673
ACA1_318090	mRNA	ACA1_318090	NW_004457289.1	4	2052	R	ACA1_318090	complement(join(<4..30,139..304,430..522,656..710,755..873,1034..1110,1179..1260,1329..1387,1492..1560,1690..>2052))	Acanthamoeba castellanii str. Neff	14912661
ACA1_318300	mRNA	ACA1_318300	NW_004457289.1	7589	9016	R	ACA1_318300	complement(join(<7589..7703,7821..7994,8162..8304,8658..8806,8899..>9016))	Acanthamoeba castellanii str. Neff	14912662
ACA1_318410	mRNA	ACA1_318410	NW_004457289.1	9311	10904	D	ACA1_318410	join(<9311..10792,10806..10831,10883..>10904)	Acanthamoeba castellanii str. Neff	14912664
ACA1_318520	mRNA	ACA1_318520	NW_004457289.1	16159	17412	R	ACA1_318520	complement(join(<16159..16477,16585..16873,16969..17132,17258..>17412))	Acanthamoeba castellanii str. Neff	14912667
ACA1_318530	mRNA	ACA1_318530	NW_004457289.1	17597	18230	R	ACA1_318530	complement(join(<17597..17965,18054..>18230))	Acanthamoeba castellanii str. Neff	14912665
ACA1_318540	mRNA	ACA1_318540	NW_004457289.1	18620	22575	D	ACA1_318540	join(<18620..19030,19193..19312,19458..19585,19666..19762,20157..20405,20502..20591,20679..20786,20958..21023,21103..21194,21310..21397,21563..21644,21757..21907,22000..22140,22215..>22575)	Acanthamoeba castellanii str. Neff	14912666
ACA1_318550	mRNA	ACA1_318550	NW_004457289.1	23427	26887	R	ACA1_318550	complement(join(<23427..23550,23632..23701,23778..23927,24009..24105,24201..24437,24505..24630,24731..24857,24969..25183,25273..25386,25499..25638,25747..25900,25985..26142,26234..26464,26565..26729,26806..>26887))	Acanthamoeba castellanii str. Neff	14912663
ACA1_139810	mRNA	ACA1_139810	NW_004457288.1	24	1319	R	ACA1_139810	complement(join(<24..185,293..422,564..681,845..>1319))	Acanthamoeba castellanii str. Neff	14912624
ACA1_139830	mRNA	ACA1_139830	NW_004457288.1	5672	7764	R	ACA1_139830	complement(join(<5672..6409,6476..6721,6826..6998,7102..7203,7282..7308,7393..7451,7517..7658,7704..>7764))	Acanthamoeba castellanii str. Neff	14912602
ACA1_139840	mRNA	ACA1_139840	NW_004457288.1	8168	10569	D	ACA1_139840	join(<8168..8343,8478..8639,8756..8909,9005..9164,9277..9412,9508..9627,9742..9881,9975..10326,10461..>10569)	Acanthamoeba castellanii str. Neff	14912603
ACA1_139850	mRNA	ACA1_139850	NW_004457288.1	11517	12742	R	ACA1_139850	complement(join(<11517..12020,12161..>12742))	Acanthamoeba castellanii str. Neff	14912647
ACA1_139860	mRNA	ACA1_139860	NW_004457288.1	14462	15260	D	ACA1_139860	join(<14462..14474,14636..14907,15084..>15260)	Acanthamoeba castellanii str. Neff	14912610
ACA1_139870	mRNA	ACA1_139870	NW_004457288.1	15350	15973	R	ACA1_139870	complement(join(<15350..15652,15733..15817,15903..>15973))	Acanthamoeba castellanii str. Neff	14912611
ACA1_139880	mRNA	ACA1_139880	NW_004457288.1	17856	18584	D	ACA1_139880	join(<17856..18333,18433..>18584)	Acanthamoeba castellanii str. Neff	14912656
ACA1_139890	mRNA	ACA1_139890	NW_004457288.1	19487	20051	R	ACA1_139890	complement(join(<19487..20006,20026..>20051))	Acanthamoeba castellanii str. Neff	14912657
ACA1_139910	mRNA	ACA1_139910	NW_004457288.1	23078	23516	D	ACA1_139910	join(<23078..23095,23108..23185,23283..>23516)	Acanthamoeba castellanii str. Neff	14912631
ACA1_139930	mRNA	ACA1_139930	NW_004457288.1	27561	27791	R	ACA1_139930	complement(<27561..>27791)	Acanthamoeba castellanii str. Neff	14912607
ACA1_139940	mRNA	ACA1_139940	NW_004457288.1	27814	28848	D	ACA1_139940	join(<27814..27860,27881..27934,28053..>28848)	Acanthamoeba castellanii str. Neff	14912608
ACA1_140050	mRNA	ACA1_140050	NW_004457288.1	28973	29573	R	ACA1_140050	complement(join(<28973..29269,29568..>29573))	Acanthamoeba castellanii str. Neff	14912609
ACA1_140060	mRNA	ACA1_140060	NW_004457288.1	29995	31436	R	ACA1_140060	complement(join(<29995..30210,30273..30731,31131..>31436))	Acanthamoeba castellanii str. Neff	14912613
ACA1_140170	mRNA	ACA1_140170	NW_004457288.1	32073	37815	D	ACA1_140170	join(<32073..32166,32350..32717,32741..33777,33917..35533,35954..36736,36905..36998,37078..37157,37242..37356,37456..37522,37592..>37815)	Acanthamoeba castellanii str. Neff	14912614
ACA1_140180	mRNA	ACA1_140180	NW_004457288.1	37881	38905	R	ACA1_140180	complement(join(<37881..37976,38083..38221,38309..38386,38489..38575,38688..38793,38878..>38905))	Acanthamoeba castellanii str. Neff	14912615
ACA1_140190	mRNA	ACA1_140190	NW_004457288.1	39574	41961	D	ACA1_140190	join(<39574..39646,39721..39819,39884..40070,40191..40333,40424..40604,40695..41023,41113..41280,41400..41479,41558..41677,41809..>41961)	Acanthamoeba castellanii str. Neff	14912622
ACA1_140200	mRNA	ACA1_140200	NW_004457288.1	42504	43553	D	ACA1_140200	join(<42504..42544,42733..42838,43031..43076,43375..>43553)	Acanthamoeba castellanii str. Neff	14912623
ACA1_140210	mRNA	ACA1_140210	NW_004457288.1	43734	45607	R	ACA1_140210	complement(join(<43734..43841,43971..44049,44142..44277,44415..44427,44576..44617,44699..44806,44920..45000,45083..45132,45242..45453,45540..>45607))	Acanthamoeba castellanii str. Neff	14912645
ACA1_140220	mRNA	ACA1_140220	NW_004457288.1	45757	46799	R	ACA1_140220	complement(join(<45757..45898,46033..>46799))	Acanthamoeba castellanii str. Neff	14912646
ACA1_140230	mRNA	ACA1_140230	NW_004457288.1	47104	47862	R	ACA1_140230	complement(join(<47104..47223,47310..47450,47548..>47862))	Acanthamoeba castellanii str. Neff	14912632
ACA1_140250	mRNA	ACA1_140250	NW_004457288.1	54703	57118	R	ACA1_140250	complement(join(<54703..54762,54861..54982,55112..55238,55342..55529,55627..55738,55807..55875,56020..56213,56330..56451,56599..56828,56912..>57118))	Acanthamoeba castellanii str. Neff	14912626
ACA1_140270	mRNA	ACA1_140270	NW_004457288.1	59750	60655	R	ACA1_140270	complement(join(<59750..59855,59910..>60655))	Acanthamoeba castellanii str. Neff	14912628
ACA1_140380	mRNA	ACA1_140380	NW_004457288.1	61267	69706	D	ACA1_140380	join(<61267..62481,62560..62636,62756..62805,62901..63032,63106..63202,63292..63351,63408..63544,63621..63634,63702..63733,63800..63891,64001..64092,64190..64279,64377..64483,64578..64746,64834..65073,65161..65462,65524..65620,65710..66254,66337..66422,66511..66600,66702..66813,66900..67063,67189..68291,68377..69118,69192..>69706)	Acanthamoeba castellanii str. Neff	14912629
ACA1_140390	mRNA	ACA1_140390	NW_004457288.1	69792	74487	D	ACA1_140390	join(<69792..69839,70053..70175,70250..70479,70548..70669,70726..70809,70889..70979,71069..71282,71498..71635,71662..71904,72256..72360,72449..72571,72633..72917,72936..73089,73192..73275,73352..73442,73556..73772,73895..74023,74087..74258,74333..>74487)	Acanthamoeba castellanii str. Neff	14912658
ACA1_140400	mRNA	ACA1_140400	NW_004457288.1	75008	76706	D	ACA1_140400	join(<75008..75097,75200..75322,75619..75656,75756..75969,76078..76215,76251..76416,76519..>76706)	Acanthamoeba castellanii str. Neff	14912625
ACA1_140510	mRNA	ACA1_140510	NW_004457288.1	76817	79091	D	ACA1_140510	join(<76817..76915,77009..77675,77778..77864,77960..78050,78161..78380,78484..78612,78712..78835,78955..>79091)	Acanthamoeba castellanii str. Neff	14912659
ACA1_140520	mRNA	ACA1_140520	NW_004457288.1	79299	80013	D	ACA1_140520	join(<79299..79523,79599..79757,79834..>80013)	Acanthamoeba castellanii str. Neff	14912660
ACA1_140530	mRNA	ACA1_140530	NW_004457288.1	80804	82885	R	ACA1_140530	complement(join(<80804..80906,80979..81133,81303..81445,81579..81723,81860..82063,82155..82269,82371..82636,82721..>82885))	Acanthamoeba castellanii str. Neff	14912648
ACA1_140540	mRNA	ACA1_140540	NW_004457288.1	83555	84989	D	ACA1_140540	join(<83555..83788,83883..84024,84098..84293,84389..84681,84772..>84989)	Acanthamoeba castellanii str. Neff	14912649
ACA1_140550	mRNA	ACA1_140550	NW_004457288.1	85377	87550	D	ACA1_140550	join(<85377..85505,85821..85922,86018..86115,86239..86329,86430..86539,86620..>87550)	Acanthamoeba castellanii str. Neff	14912650
ACA1_140560	mRNA	ACA1_140560	NW_004457288.1	87642	88080	R	ACA1_140560	complement(join(<87642..87766,87882..>88080))	Acanthamoeba castellanii str. Neff	14912604
ACA1_140570	mRNA	ACA1_140570	NW_004457288.1	88459	88921	D	ACA1_140570	join(<88459..88595,88714..>88921)	Acanthamoeba castellanii str. Neff	14912605
ACA1_140580	mRNA	ACA1_140580	NW_004457288.1	89135	91055	R	ACA1_140580	complement(join(<89135..89206,89289..89393,89476..89564,89698..89798,89906..90027,90161..90207,90306..90408,90498..90626,90726..90806,90900..>91055))	Acanthamoeba castellanii str. Neff	14912653
ACA1_140590	mRNA	ACA1_140590	NW_004457288.1	91320	94105	D	ACA1_140590	join(<91320..91484,91633..91799,91940..92047,92145..92227,92292..92396,92474..92566,92633..92757,92827..92900,92999..93130,93195..93289,93372..93449,93535..93673,93758..93852,93954..>94105)	Acanthamoeba castellanii str. Neff	14912654
ACA1_140600	mRNA	ACA1_140600	NW_004457288.1	94263	96305	R	ACA1_140600	complement(join(<94263..94493,94769..94843,94924..95129,95257..95330,95380..95402,95434..95481,95574..95814,95998..>96305))	Acanthamoeba castellanii str. Neff	14912655
ACA1_140610	mRNA	ACA1_140610	NW_004457288.1	96431	103760	R	ACA1_140610	complement(join(<96431..96516,96625..96789,96877..97009,97136..97399,97497..97637,97730..97891,97998..98270,98398..98611,98695..98780,98884..98978,99052..99109,99186..99820,99908..100009,100123..100234,100315..100475,100548..100641,100886..100951,101048..101142,101216..101273,101420..102060,102124..102225,102331..102442,102503..102663,102823..102916,102997..103082,103217..103325,103447..103615,103729..>103760))	Acanthamoeba castellanii str. Neff	14912616
ACA1_140720	mRNA	ACA1_140720	NW_004457288.1	104333	105283	R	ACA1_140720	complement(join(<104333..104528,104730..105133,105218..>105283))	Acanthamoeba castellanii str. Neff	14912639
ACA1_140730	mRNA	ACA1_140730	NW_004457288.1	106037	110200	R	ACA1_140730	complement(join(<106037..106657,106684..107648,107708..107815,107924..108004,108078..108224,108334..108457,108539..108602,108686..108800,108891..108943,109028..109142,109263..109354,109459..109513,109700..109758,109848..>110200))	Acanthamoeba castellanii str. Neff	14912636
ACA1_140740	mRNA	ACA1_140740	NW_004457288.1	110316	112554	R	ACA1_140740	complement(join(<110316..110480,110568..110710,110786..110913,111012..111169,111259..111374,111527..111637,111706..112245,112410..>112554))	Acanthamoeba castellanii str. Neff	14912637
ACA1_140750	mRNA	ACA1_140750	NW_004457288.1	113170	113569	D	ACA1_140750	join(<113170..113373,113456..>113569)	Acanthamoeba castellanii str. Neff	14912640
ACA1_140760	mRNA	ACA1_140760	NW_004457288.1	114414	115072	D	ACA1_140760	join(<114414..114662,114884..>115072)	Acanthamoeba castellanii str. Neff	14912641
ACA1_140770	mRNA	ACA1_140770	NW_004457288.1	115135	117889	D	ACA1_140770	join(<115135..115159,115274..115399,115491..115603,115698..115771,115843..115967,116075..116196,116270..116366,116444..116530,116687..116793,116864..117011,117138..117224,117328..117409,117500..117581,117656..>117889)	Acanthamoeba castellanii str. Neff	14912642
ACA1_140780	mRNA	ACA1_140780	NW_004457288.1	119022	121901	D	ACA1_140780	join(<119022..119537,119624..119719,119804..119860,119968..120065,120164..120271,120361..120528,120613..120751,120886..121017,121095..121320,121401..121660,121743..>121901)	Acanthamoeba castellanii str. Neff	14912643
ACA1_140790	mRNA	ACA1_140790	NW_004457288.1	122530	123337	D	ACA1_140790	join(<122530..122918,123157..>123337)	Acanthamoeba castellanii str. Neff	14912644
ACA1_140800	mRNA	ACA1_140800	NW_004457288.1	123449	124872	R	ACA1_140800	complement(join(<123449..123568,123692..124067,124213..124511,124600..124702,124835..>124872))	Acanthamoeba castellanii str. Neff	14912651
ACA1_140910	mRNA	ACA1_140910	NW_004457288.1	128197	129266	R	ACA1_140910	complement(join(<128197..128223,128259..128535,128644..128764,128873..128933,129024..>129266))	Acanthamoeba castellanii str. Neff	14912652
ACA1_140920	mRNA	ACA1_140920	NW_004457288.1	129495	131304	R	ACA1_140920	complement(join(<129495..129650,129733..129876,129963..130009,130086..130185,130328..130406,130448..130555,130628..130672,130747..130798,130887..130934,131023..131063,131141..131210,131283..>131304))	Acanthamoeba castellanii str. Neff	14912620
ACA1_140930	mRNA	ACA1_140930	NW_004457288.1	132115	133108	R	ACA1_140930	complement(join(<132115..132171,132243..132416,132501..132593,132611..132750,132845..132917,132980..>133108))	Acanthamoeba castellanii str. Neff	14912621
ACA1_140940	mRNA	ACA1_140940	NW_004457288.1	135342	136826	R	ACA1_140940	complement(join(<135342..136123,136241..>136826))	Acanthamoeba castellanii str. Neff	14912617
ACA1_140950	mRNA	ACA1_140950	NW_004457288.1	136997	137689	R	ACA1_140950	complement(join(<136997..137073,137150..137314,137446..>137689))	Acanthamoeba castellanii str. Neff	14912618
ACA1_140960	mRNA	ACA1_140960	NW_004457288.1	137709	138692	R	ACA1_140960	complement(join(<137709..137746,137839..138272,138373..138557,138615..>138692))	Acanthamoeba castellanii str. Neff	14912619
ACA1_140970	mRNA	ACA1_140970	NW_004457288.1	138930	140889	D	ACA1_140970	join(<138930..139310,139478..139848,139949..140423,140497..>140889)	Acanthamoeba castellanii str. Neff	14912634
ACA1_140980	mRNA	ACA1_140980	NW_004457288.1	141275	143017	R	ACA1_140980	complement(join(<141275..141451,141552..141627,141755..141895,142069..142202,142345..142440,142599..142760,142889..>143017))	Acanthamoeba castellanii str. Neff	14912635
ACA1_141090	mRNA	ACA1_141090	NW_004457288.1	145580	146941	R	ACA1_141090	complement(join(<145580..145811,145922..146211,146358..146452,146619..146735,146821..>146941))	Acanthamoeba castellanii str. Neff	14912638
ACA1_301000	mRNA	ACA1_301000	NW_004457287.1	53	1333	R	ACA1_301000	complement(join(<53..148,239..513,575..724,863..1163,1262..>1333))	Acanthamoeba castellanii str. Neff	14912601
ACA1_301010	mRNA	ACA1_301010	NW_004457287.1	1986	3534	D	ACA1_301010	join(<1986..2414,2500..2608,2761..2871,2966..3067,3181..3287,3397..>3534)	Acanthamoeba castellanii str. Neff	14912599
ACA1_301120	mRNA	ACA1_301120	NW_004457287.1	8670	10671	R	ACA1_301120	complement(join(<8670..8965,9039..9195,9298..9459,9556..9618,9709..9817,9929..>10671))	Acanthamoeba castellanii str. Neff	14912600
ACA1_013980	mRNA	ACA1_013980	NW_004457286.1	6056	6436	R	ACA1_013980	complement(<6056..>6436)	Acanthamoeba castellanii str. Neff	14912595
ACA1_014100	mRNA	ACA1_014100	NW_004457286.1	8009	8752	D	ACA1_014100	join(<8009..8165,8245..8350,8458..>8752)	Acanthamoeba castellanii str. Neff	14912594
ACA1_014210	mRNA	ACA1_014210	NW_004457286.1	11749	13053	R	ACA1_014210	complement(join(<11749..12588,12961..>13053))	Acanthamoeba castellanii str. Neff	14912592
ACA1_014220	mRNA	ACA1_014220	NW_004457286.1	13300	14924	R	ACA1_014220	complement(join(<13300..13531,13614..13783,13858..14071,14162..14421,14537..14715,14828..>14924))	Acanthamoeba castellanii str. Neff	14912593
ACA1_014230	mRNA	ACA1_014230	NW_004457286.1	16651	17133	R	ACA1_014230	complement(join(<16651..16875,16932..17006,17062..>17133))	Acanthamoeba castellanii str. Neff	14912596
ACA1_014240	mRNA	ACA1_014240	NW_004457286.1	17498	20232	R	ACA1_014240	complement(join(<17498..18606,18675..18833,18912..19083,19166..19304,19387..19505,19553..19657,19752..19866,19988..>20232))	Acanthamoeba castellanii str. Neff	14912597
ACA1_014250	mRNA	ACA1_014250	NW_004457286.1	20955	21699	R	ACA1_014250	complement(join(<20955..21059,21208..21236,21461..21506,21643..>21699))	Acanthamoeba castellanii str. Neff	14912591
ACA1_015310	mRNA	ACA1_015310	NW_004457285.1	551	4511	R	ACA1_015310	complement(join(<551..1251,1401..1487,1572..1618,1691..1773,1860..1943,2022..2115,2199..2346,2429..2558,2634..2741,2826..2877,2983..3098,3301..3408,3505..3600,3676..3783,3855..3931,4029..4113,4191..4279,4373..>4511))	Acanthamoeba castellanii str. Neff	14912587
ACA1_015320	mRNA	ACA1_015320	NW_004457285.1	5571	5970	D	ACA1_015320	join(<5571..5597,5671..5790,5887..>5970)	Acanthamoeba castellanii str. Neff	14912589
ACA1_015330	mRNA	ACA1_015330	NW_004457285.1	6133	7484	R	ACA1_015330	complement(join(<6133..6372,6442..6537,6621..6773,6848..6966,7029..7098,7158..7289,7371..>7484))	Acanthamoeba castellanii str. Neff	14912588
ACA1_015340	mRNA	ACA1_015340	NW_004457285.1	7998	10195	D	ACA1_015340	join(<7998..8651,8725..8840,8940..9024,9100..9183,9277..9396,9469..9559,9651..9823,9899..>10195)	Acanthamoeba castellanii str. Neff	14912584
ACA1_015350	mRNA	ACA1_015350	NW_004457285.1	10285	12076	D	ACA1_015350	join(<10285..10320,10469..10582,10684..10800,10880..10999,11062..11112,11225..11401,11509..11631,11724..11838,11910..>12076)	Acanthamoeba castellanii str. Neff	14912585
ACA1_015360	mRNA	ACA1_015360	NW_004457285.1	12161	13909	R	ACA1_015360	complement(join(<12161..12472,12591..12824,12932..13092,13184..13372,13519..>13909))	Acanthamoeba castellanii str. Neff	14912586
ACA1_015370	mRNA	ACA1_015370	NW_004457285.1	14137	14943	R	ACA1_015370	complement(join(<14137..14178,14262..14672,14689..14712,14839..>14943))	Acanthamoeba castellanii str. Neff	14912590
ACA1_077510	mRNA	ACA1_077510	NW_004457284.1	1752	3281	R	ACA1_077510	complement(join(<1752..1904,1973..2073,2285..2374,2478..2590,2688..2775,2871..2935,3001..>3281))	Acanthamoeba castellanii str. Neff	14912580
ACA1_077520	mRNA	ACA1_077520	NW_004457284.1	3418	6205	R	ACA1_077520	complement(join(<3418..3605,3718..3786,3842..4018,4140..4283,4406..4493,4594..4649,4782..4879,5024..5118,5239..5363,5461..5573,5698..5824,5948..6013,6097..>6205))	Acanthamoeba castellanii str. Neff	14912581
ACA1_077630	mRNA	ACA1_077630	NW_004457284.1	7408	10898	R	ACA1_077630	complement(join(<7408..7668,7763..8035,8131..8346,8402..8593,8674..8798,8908..8990,9054..10204,10223..10420,10533..10615,10772..>10898))	Acanthamoeba castellanii str. Neff	14912583
ACA1_077640	mRNA	ACA1_077640	NW_004457284.1	11119	12903	R	ACA1_077640	complement(join(<11119..11769,11915..11976,12055..12217,12580..12712,12797..>12903))	Acanthamoeba castellanii str. Neff	14912582
ACA1_100770	mRNA	ACA1_100770	NW_004457283.1	226	1043	D	ACA1_100770	join(<226..383,459..630,735..>1043)	Acanthamoeba castellanii str. Neff	14912569
ACA1_100780	mRNA	ACA1_100780	NW_004457283.1	1006	2740	R	ACA1_100780	complement(join(<1006..1183,1290..1673,1747..1929,2066..2271,2471..>2740))	Acanthamoeba castellanii str. Neff	14912541
ACA1_100890	mRNA	ACA1_100890	NW_004457283.1	3330	7398	R	ACA1_100890	complement(join(<3330..3373,3432..4587,4681..4804,4890..4958,5038..5152,5236..5917,5973..6107,6175..6284,6386..6524,6611..6701,6821..6930,7042..7179,7264..>7398))	Acanthamoeba castellanii str. Neff	14912542
ACA1_100900	mRNA	ACA1_100900	NW_004457283.1	7408	10563	R	ACA1_100900	complement(join(<7408..7755,7862..7999,8091..8153,8234..8340,8440..8561,8710..8919,9015..9118,9351..9542,9618..9690,9778..9930,10013..10139,10235..10315,10509..>10563))	Acanthamoeba castellanii str. Neff	14912554
ACA1_100910	mRNA	ACA1_100910	NW_004457283.1	10851	14478	R	ACA1_100910	complement(join(<10851..11011,11157..11341,11374..11531,11612..12163,12259..12657,12713..12867,12948..13498,13569..13651,13718..13843,13918..>14478))	Acanthamoeba castellanii str. Neff	14912555
ACA1_100920	mRNA	ACA1_100920	NW_004457283.1	15814	18636	R	ACA1_100920	complement(join(<15814..15915,16000..16153,16213..16278,16340..16457,16546..16662,16752..16851,16938..17028,17103..17227,17308..17746,17890..18083,18171..18292,18369..18473,18579..>18636))	Acanthamoeba castellanii str. Neff	14912550
ACA1_100930	mRNA	ACA1_100930	NW_004457283.1	19569	24393	D	ACA1_100930	join(<19569..19708,19814..20415,20553..20606,20673..20753,20845..20960,21053..21110,21182..21314,21382..21456,21550..21622,21711..21794,21840..22093,22135..22323,22404..22483,22575..22700,22787..23200,23320..23543,23629..23829,23905..24081,24157..>24393)	Acanthamoeba castellanii str. Neff	14912572
ACA1_100940	mRNA	ACA1_100940	NW_004457283.1	24867	25934	D	ACA1_100940	<24867..>25934	Acanthamoeba castellanii str. Neff	14912551
ACA1_100950	mRNA	ACA1_100950	NW_004457283.1	25934	29570	D	ACA1_100950	join(<25934..27145,27228..27324,27430..28276,28496..>29570)	Acanthamoeba castellanii str. Neff	14912545
ACA1_101060	mRNA	ACA1_101060	NW_004457283.1	30123	31228	D	ACA1_101060	join(<30123..30482,30566..>31228)	Acanthamoeba castellanii str. Neff	14912546
ACA1_101070	mRNA	ACA1_101070	NW_004457283.1	31442	34116	R	ACA1_101070	complement(join(<31442..31590,31629..31743,31836..31957,32033..32064,32135..32176,32247..32313,32381..32450,32528..32567,32647..32724,32814..32881,32981..33040,33132..33229,33321..33432,33521..33618,33724..33874,33910..33967,34073..>34116))	Acanthamoeba castellanii str. Neff	14912547
ACA1_101080	mRNA	ACA1_101080	NW_004457283.1	34261	36311	R	ACA1_101080	complement(join(<34261..34390,34456..34606,34687..34758,34856..35065,35147..35292,35382..35507,35582..35671,35771..35804,35875..36033,36206..>36311))	Acanthamoeba castellanii str. Neff	14912556
ACA1_101090	mRNA	ACA1_101090	NW_004457283.1	36541	38237	R	ACA1_101090	complement(join(<36541..36687,36785..37114,37184..37433,37490..37656,37777..38081,38180..>38237))	Acanthamoeba castellanii str. Neff	14912543
ACA1_101100	mRNA	ACA1_101100	NW_004457283.1	38390	40922	R	ACA1_101100	complement(join(<38390..38426,38495..39170,39254..39421,39509..39636,39697..39762,39839..39993,40073..40648,40726..40887,40899..>40922))	Acanthamoeba castellanii str. Neff	14912544
ACA1_101310	mRNA	ACA1_101310	NW_004457283.1	43926	44664	D	ACA1_101310	join(<43926..44163,44246..44350,44426..>44664)	Acanthamoeba castellanii str. Neff	14912552
ACA1_101320	mRNA	ACA1_101320	NW_004457283.1	44958	46553	D	ACA1_101320	join(<44958..45037,45121..45204,45274..45471,45600..45645,45658..45721,45820..46011,46094..46283,46359..46468,46543..>46553)	Acanthamoeba castellanii str. Neff	14912553
ACA1_101330	mRNA	ACA1_101330	NW_004457283.1	46817	47735	D	ACA1_101330	join(<46817..46882,46980..47022,47092..47181,47193..47293,47316..47438,47523..>47735)	Acanthamoeba castellanii str. Neff	14912563
ACA1_101340	mRNA	ACA1_101340	NW_004457283.1	47807	49627	R	ACA1_101340	complement(join(<47807..48033,48149..48345,48421..48541,48645..49093,49204..49273,49354..>49627))	Acanthamoeba castellanii str. Neff	14912564
ACA1_101350	mRNA	ACA1_101350	NW_004457283.1	49816	50369	R	ACA1_101350	complement(join(<49816..50142,50220..>50369))	Acanthamoeba castellanii str. Neff	14912573
ACA1_101360	mRNA	ACA1_101360	NW_004457283.1	50426	51803	R	ACA1_101360	complement(join(<50426..50823,50929..51639,51761..>51803))	Acanthamoeba castellanii str. Neff	14912574
ACA1_101370	mRNA	ACA1_101370	NW_004457283.1	52058	55342	D	ACA1_101370	join(<52058..52105,52185..52487,52596..53183,53421..53486,53564..53805,53883..53964,54056..54282,54374..54581,54659..54725,54801..>55342)	Acanthamoeba castellanii str. Neff	14912575
ACA1_101380	mRNA	ACA1_101380	NW_004457283.1	55467	56326	D	ACA1_101380	join(<55467..55676,55758..56117,56201..>56326)	Acanthamoeba castellanii str. Neff	14912578
ACA1_101390	mRNA	ACA1_101390	NW_004457283.1	56358	56814	R	ACA1_101390	complement(join(<56358..56417,56498..56621,56696..>56814))	Acanthamoeba castellanii str. Neff	14912579
ACA1_101400	mRNA	ACA1_101400	NW_004457283.1	56987	57947	R	ACA1_101400	complement(join(<56987..57025,57157..57786,57927..>57947))	Acanthamoeba castellanii str. Neff	14912565
ACA1_101410	mRNA	ACA1_101410	NW_004457283.1	58223	58677	D	ACA1_101410	join(<58223..58353,58440..>58677)	Acanthamoeba castellanii str. Neff	14912566
ACA1_101420	mRNA	ACA1_101420	NW_004457283.1	58779	61228	D	ACA1_101420	join(<58779..58842,58914..59022,59108..59222,59316..59443,59528..59599,59674..59791,59894..60177,60188..60371,60432..60509,60606..60671,60751..60930,61046..61090,61187..>61228)	Acanthamoeba castellanii str. Neff	14912567
ACA1_101430	mRNA	ACA1_101430	NW_004457283.1	61213	62559	R	ACA1_101430	complement(<61213..>62559)	Acanthamoeba castellanii str. Neff	14912539
ACA1_101440	mRNA	ACA1_101440	NW_004457283.1	62948	64024	R	ACA1_101440	complement(join(<62948..63013,63095..63169,63264..63329,63412..63534,63608..>64024))	Acanthamoeba castellanii str. Neff	14912540
ACA1_101450	mRNA	ACA1_101450	NW_004457283.1	64439	64936	D	ACA1_101450	<64439..>64936	Acanthamoeba castellanii str. Neff	14912560
ACA1_101460	mRNA	ACA1_101460	NW_004457283.1	65353	68867	R	ACA1_101460	complement(join(<65353..65582,65699..65965,66063..66235,66340..66807,66906..67057,67159..67275,67377..>68867))	Acanthamoeba castellanii str. Neff	14912561
ACA1_101470	mRNA	ACA1_101470	NW_004457283.1	69102	69951	D	ACA1_101470	join(<69102..69230,69301..69416,69478..69592,69697..>69951)	Acanthamoeba castellanii str. Neff	14912562
ACA1_101480	mRNA	ACA1_101480	NW_004457283.1	70031	72432	D	ACA1_101480	join(<70031..70189,70267..70419,70490..70758,70820..71052,71134..71286,71377..71474,71552..71675,71734..71835,71925..72148,72210..72293,72367..>72432)	Acanthamoeba castellanii str. Neff	14912548
ACA1_101490	mRNA	ACA1_101490	NW_004457283.1	72537	73834	R	ACA1_101490	complement(join(<72537..72854,72923..73116,73187..73252,73317..73433,73538..73692,73770..>73834))	Acanthamoeba castellanii str. Neff	14912549
ACA1_101500	mRNA	ACA1_101500	NW_004457283.1	74755	78496	D	ACA1_101500	join(<74755..74805,74881..74991,75071..75193,75283..75444,75517..75719,75832..75969,76037..76337,76416..76536,76604..76805,76878..77118,77191..77508,77587..77728,77794..77949,78018..>78496)	Acanthamoeba castellanii str. Neff	14912537
ACA1_101510	mRNA	ACA1_101510	NW_004457283.1	78684	82604	D	ACA1_101510	join(<78684..79116,79226..79287,79386..79953,80033..80489,80579..80750,80838..81199,81308..>82604)	Acanthamoeba castellanii str. Neff	14912538
ACA1_101520	mRNA	ACA1_101520	NW_004457283.1	82734	85836	R	ACA1_101520	complement(join(<82734..82939,83019..83287,83363..83643,83722..83915,84068..84188,84293..84431,84512..84648,84777..84815,84891..85099,85206..85279,85366..85470,85542..85611,85773..>85836))	Acanthamoeba castellanii str. Neff	14912576
ACA1_101530	mRNA	ACA1_101530	NW_004457283.1	86180	87876	R	ACA1_101530	complement(join(<86180..86287,86384..86478,86547..86623,86677..86771,86840..86886,86952..87083,87170..87325,87407..87522,87586..87651,87737..>87876))	Acanthamoeba castellanii str. Neff	14912577
ACA1_101540	mRNA	ACA1_101540	NW_004457283.1	88281	91296	D	ACA1_101540	join(<88281..88428,88581..88651,88746..89189,89271..89350,89459..89552,89656..>91296)	Acanthamoeba castellanii str. Neff	14912570
ACA1_101550	mRNA	ACA1_101550	NW_004457283.1	91790	93570	D	ACA1_101550	join(<91790..91970,92046..92292,92359..92452,92526..92670,92691..92749,92782..92890,92963..93083,93169..93297,93444..>93570)	Acanthamoeba castellanii str. Neff	14912571
ACA1_101560	mRNA	ACA1_101560	NW_004457283.1	93856	96969	D	ACA1_101560	join(<93856..93960,94037..94130,94248..94369,94476..94566,94691..94923,94988..95055,95161..95314,95429..95559,95676..96050,96154..96247,96337..96729,96835..>96969)	Acanthamoeba castellanii str. Neff	14912557
ACA1_101570	mRNA	ACA1_101570	NW_004457283.1	98027	100119	R	ACA1_101570	complement(join(<98027..98490,98582..98774,98788..98857,98931..98989,99000..99245,99278..99532,99620..99843,99924..>100119))	Acanthamoeba castellanii str. Neff	14912558
ACA1_101580	mRNA	ACA1_101580	NW_004457283.1	101202	101776	D	ACA1_101580	join(<101202..101205,101355..101536,101642..>101776)	Acanthamoeba castellanii str. Neff	14912559
ACA1_101690	mRNA	ACA1_101690	NW_004457283.1	102352	102714	R	ACA1_101690	complement(<102352..>102714)	Acanthamoeba castellanii str. Neff	14912568
ACA1_025670	mRNA	ACA1_025670	NW_004457282.1	17	3690	R	ACA1_025670	complement(join(<17..79,203..307,391..591,690..820,896..982,1122..1279,1345..1478,1609..1698,1800..1888,1977..2068,2142..2247,2303..2410,2481..2562,2666..2779,2864..2912,2970..3069,3160..3217,3294..3345,3427..3502,3621..>3690))	Acanthamoeba castellanii str. Neff	14912532
ACA1_025680	mRNA	ACA1_025680	NW_004457282.1	4065	4911	R	ACA1_025680	complement(join(<4065..4100,4212..4372,4460..4613,4684..>4911))	Acanthamoeba castellanii str. Neff	14912536
ACA1_025690	mRNA	ACA1_025690	NW_004457282.1	5166	6333	R	ACA1_025690	complement(join(<5166..5576,5677..5850,5995..>6333))	Acanthamoeba castellanii str. Neff	14912531
ACA1_025700	mRNA	ACA1_025700	NW_004457282.1	6666	7962	R	ACA1_025700	complement(join(<6666..6810,6881..6978,7056..7142,7246..7305,7380..7510,7578..7603,7691..7794,7900..>7962))	Acanthamoeba castellanii str. Neff	14912535
ACA1_025710	mRNA	ACA1_025710	NW_004457282.1	8412	10083	R	ACA1_025710	complement(join(<8412..8681,8776..8934,9019..9142,9241..9373,9462..9578,9657..>10083))	Acanthamoeba castellanii str. Neff	14912533
ACA1_025720	mRNA	ACA1_025720	NW_004457282.1	10407	11855	D	ACA1_025720	join(<10407..10454,10563..10733,10820..10974,11051..11366,11442..11516,11574..>11855)	Acanthamoeba castellanii str. Neff	14912534
ACA1_025730	mRNA	ACA1_025730	NW_004457282.1	12708	13736	D	ACA1_025730	join(<12708..12862,13097..13277,13400..13515,13609..>13736)	Acanthamoeba castellanii str. Neff	14912530
ACA1_297530	mRNA	ACA1_297530	NW_004457281.1	224	1611	R	ACA1_297530	complement(join(<224..366,459..554,637..759,861..931,1005..1045,1127..1266,1336..1426,1495..>1611))	Acanthamoeba castellanii str. Neff	14912529
ACA1_297540	mRNA	ACA1_297540	NW_004457281.1	1708	3146	D	ACA1_297540	join(<1708..1770,1872..1972,2012..2142,2240..2306,2428..2644,2716..2856,2943..2961,3028..>3146)	Acanthamoeba castellanii str. Neff	14912528
ACA1_297650	mRNA	ACA1_297650	NW_004457281.1	9287	10051	R	ACA1_297650	complement(join(<9287..9370,9440..9574,9687..9809,9905..>10051))	Acanthamoeba castellanii str. Neff	14912527
ACA1_352950	mRNA	ACA1_352950	NW_004457280.1	2017	2319	R	ACA1_352950	complement(<2017..>2319)	Acanthamoeba castellanii str. Neff	14912526
ACA1_352960	mRNA	ACA1_352960	NW_004457280.1	2418	3707	D	ACA1_352960	<2418..>3707	Acanthamoeba castellanii str. Neff	14912524
ACA1_352970	mRNA	ACA1_352970	NW_004457280.1	4278	7536	R	ACA1_352970	complement(join(<4278..4655,5009..5320,5432..5650,5725..5870,5961..6093,6176..6410,6478..6594,6683..6828,6923..7356,7464..>7536))	Acanthamoeba castellanii str. Neff	14912522
ACA1_353180	mRNA	ACA1_353180	NW_004457280.1	8839	10627	R	ACA1_353180	complement(join(<8839..9024,9091..9448,9462..9655,9694..9947,10058..10215,10296..10417,10499..>10627))	Acanthamoeba castellanii str. Neff	14912523
ACA1_353190	mRNA	ACA1_353190	NW_004457280.1	10746	13612	R	ACA1_353190	complement(join(<10746..10837,10941..11011,11123..11271,11370..11456,11561..11767,11794..12122,12236..12291,12369..12487,12656..12734,12839..12915,13031..13097,13170..13240,13312..13425,13520..>13612))	Acanthamoeba castellanii str. Neff	14912519
ACA1_353200	mRNA	ACA1_353200	NW_004457280.1	13720	14598	D	ACA1_353200	join(<13720..13812,13913..13956,14024..14072,14312..14410,14473..>14598)	Acanthamoeba castellanii str. Neff	14912520
ACA1_353210	mRNA	ACA1_353210	NW_004457280.1	15009	16814	R	ACA1_353210	complement(join(<15009..15118,15182..15406,15542..15779,15825..16076,16148..16322,16449..16576,16728..>16814))	Acanthamoeba castellanii str. Neff	14912521
ACA1_353220	mRNA	ACA1_353220	NW_004457280.1	16836	17826	R	ACA1_353220	complement(join(<16836..16945,17003..17096,17173..17444,17808..>17826))	Acanthamoeba castellanii str. Neff	14912507
ACA1_353230	mRNA	ACA1_353230	NW_004457280.1	21665	24499	R	ACA1_353230	complement(join(<21665..22154,22209..22354,22412..22855,22901..24131,24156..>24499))	Acanthamoeba castellanii str. Neff	14912508
ACA1_353340	mRNA	ACA1_353340	NW_004457280.1	25325	25927	R	ACA1_353340	complement(<25325..>25927)	Acanthamoeba castellanii str. Neff	14912509
ACA1_353350	mRNA	ACA1_353350	NW_004457280.1	27380	28799	D	ACA1_353350	join(<27380..27406,27470..27994,28133..28318,28401..>28799)	Acanthamoeba castellanii str. Neff	14912510
ACA1_353460	mRNA	ACA1_353460	NW_004457280.1	29150	32904	D	ACA1_353460	join(<29150..29257,29416..29501,29568..29643,29730..29791,29874..29922,30050..30177,30277..30387,30480..30573,32069..32095,32172..32430,32549..32696,32742..>32904)	Acanthamoeba castellanii str. Neff	14912511
ACA1_353570	mRNA	ACA1_353570	NW_004457280.1	33405	36320	D	ACA1_353570	join(<33405..33417,33638..34895,35043..35133,35222..35304,35407..35521,35649..35733,35842..>36320)	Acanthamoeba castellanii str. Neff	14912512
ACA1_353580	mRNA	ACA1_353580	NW_004457280.1	36635	38640	R	ACA1_353580	complement(join(<36635..36666,36681..36791,36906..36981,37057..37162,37261..37313,37495..37573,37650..37751,37852..37910,38014..38098,38200..38294,38372..38474,38591..>38640))	Acanthamoeba castellanii str. Neff	14912513
ACA1_353600	mRNA	ACA1_353600	NW_004457280.1	43100	44136	R	ACA1_353600	complement(join(<43100..43271,43355..43432,43512..43627,43704..43735,43819..43969,44116..>44136))	Acanthamoeba castellanii str. Neff	14912504
ACA1_353610	mRNA	ACA1_353610	NW_004457280.1	44411	46290	D	ACA1_353610	join(<44411..44501,44661..44787,44862..45002,45219..45328,45471..45605,45688..45776,45886..>46290)	Acanthamoeba castellanii str. Neff	14912514
ACA1_353620	mRNA	ACA1_353620	NW_004457280.1	46361	50760	R	ACA1_353620	complement(join(<46361..46515,46617..46741,46846..46922,47020..47347,47461..47520,47656..47727,47862..47905,48025..48134,48224..48296,48421..48539,48688..49263,49366..49509,49588..49644,49891..50052,50160..50266,50359..50466,50744..>50760))	Acanthamoeba castellanii str. Neff	14912515
ACA1_353630	mRNA	ACA1_353630	NW_004457280.1	51717	53278	D	ACA1_353630	join(<51717..51759,51854..51953,52357..52449,52568..52681,52910..52995,53085..>53278)	Acanthamoeba castellanii str. Neff	14912516
ACA1_353640	mRNA	ACA1_353640	NW_004457280.1	53373	60254	D	ACA1_353640	join(<53373..53381,53528..53607,53703..53802,53862..54037,54120..54334,54482..54544,54614..54709,54810..54922,55010..55089,55163..55289,55379..55441,55577..55704,55795..55910,56005..56138,56306..56518,56608..56717,56845..56927,57068..57158,57269..57405,57427..57433,57568..57779,57871..57917,57994..58062,58152..58247,58345..58425,58533..58757,58886..59662,59742..>60254)	Acanthamoeba castellanii str. Neff	14912505
ACA1_353650	mRNA	ACA1_353650	NW_004457280.1	60711	62885	D	ACA1_353650	join(<60711..60860,60891..61021,61102..61219,61305..61374,61464..61565,61647..61749,61837..61977,62068..62215,62335..62456,62532..62553,62661..>62885)	Acanthamoeba castellanii str. Neff	14912506
ACA1_353760	mRNA	ACA1_353760	NW_004457280.1	67073	67568	R	ACA1_353760	complement(join(<67073..67231,67362..67469,67554..>67568))	Acanthamoeba castellanii str. Neff	14912517
ACA1_353770	mRNA	ACA1_353770	NW_004457280.1	69215	70593	D	ACA1_353770	join(<69215..69309,69388..69488,69565..69711,70134..70265,70347..70433,70518..>70593)	Acanthamoeba castellanii str. Neff	14912518
ACA1_353880	mRNA	ACA1_353880	NW_004457280.1	75648	76460	D	ACA1_353880	join(<75648..75861,75919..75961,76060..76240,76317..>76460)	Acanthamoeba castellanii str. Neff	14912525
ACA1_014980	mRNA	ACA1_014980	NW_004457279.1	109	1344	D	ACA1_014980	join(<109..127,197..480,565..640,698..842,912..1008,1093..>1344)	Acanthamoeba castellanii str. Neff	14912500
ACA1_014990	mRNA	ACA1_014990	NW_004457279.1	1656	3759	D	ACA1_014990	join(<1656..1682,1843..2469,2549..2697,2794..2953,3037..3234,3314..3496,3580..>3759)	Acanthamoeba castellanii str. Neff	14912501
ACA1_015100	mRNA	ACA1_015100	NW_004457279.1	6113	6829	D	ACA1_015100	join(<6113..6258,6350..6488,6600..6758,6770..>6829)	Acanthamoeba castellanii str. Neff	14912502
ACA1_015210	mRNA	ACA1_015210	NW_004457279.1	9087	10613	R	ACA1_015210	complement(join(<9087..9413,9497..9601,9679..10085,10195..10273,10344..10452,10576..>10613))	Acanthamoeba castellanii str. Neff	14912499
ACA1_117450	mRNA	ACA1_117450	NW_004457278.1	49	802	D	ACA1_117450	join(<49..176,256..394,476..>802)	Acanthamoeba castellanii str. Neff	14912496
ACA1_117560	mRNA	ACA1_117560	NW_004457278.1	4040	5408	D	ACA1_117560	join(<4040..4429,4528..4833,4941..5077,5176..5292,5369..>5408)	Acanthamoeba castellanii str. Neff	14912497
ACA1_117680	mRNA	ACA1_117680	NW_004457278.1	6367	6725	R	ACA1_117680	complement(<6367..>6725)	Acanthamoeba castellanii str. Neff	14912498
ACA1_321160	mRNA	ACA1_321160	NW_004457277.1	350	2345	R	ACA1_321160	complement(join(<350..565,658..842,936..1092,1220..1283,1384..1528,1662..1881,1968..2086,2264..>2345))	Acanthamoeba castellanii str. Neff	14912493
ACA1_321170	mRNA	ACA1_321170	NW_004457277.1	2488	3196	D	ACA1_321170	join(<2488..2653,2720..3037,3099..>3196)	Acanthamoeba castellanii str. Neff	14912491
ACA1_321180	mRNA	ACA1_321180	NW_004457277.1	3513	8006	D	ACA1_321180	join(<3513..4604,4723..4770,4870..5043,5219..5342,5449..5543,5670..5861,5999..6463,6612..6800,6901..7083,7176..7343,7448..7646,7750..>8006)	Acanthamoeba castellanii str. Neff	14912494
ACA1_321190	mRNA	ACA1_321190	NW_004457277.1	9244	10447	R	ACA1_321190	complement(join(<9244..9314,9440..9524,9663..9774,9861..9948,10025..10123,10258..>10447))	Acanthamoeba castellanii str. Neff	14912489
ACA1_321200	mRNA	ACA1_321200	NW_004457277.1	10664	11134	D	ACA1_321200	<10664..>11134	Acanthamoeba castellanii str. Neff	14912490
ACA1_321210	mRNA	ACA1_321210	NW_004457277.1	11449	14151	R	ACA1_321210	complement(join(<11449..11538,11621..11781,11872..11978,12049..12454,12537..12800,12871..12985,13124..13351,13450..13651,13732..13813,13911..>14151))	Acanthamoeba castellanii str. Neff	14912495
ACA1_321220	mRNA	ACA1_321220	NW_004457277.1	14878	15871	D	ACA1_321220	join(<14878..15153,15459..15593,15695..>15871)	Acanthamoeba castellanii str. Neff	14912492
ACA1_011040	mRNA	ACA1_011040	NW_004457276.1	356	1121	R	ACA1_011040	complement(join(<356..379,490..677,977..>1121))	Acanthamoeba castellanii str. Neff	14912488
ACA1_011150	mRNA	ACA1_011150	NW_004457276.1	7386	9176	R	ACA1_011150	complement(join(<7386..7429,7456..7471,7544..7753,7825..7963,8152..8415,8502..8576,8659..8841,8906..9030,9093..>9176))	Acanthamoeba castellanii str. Neff	14912486
ACA1_011160	mRNA	ACA1_011160	NW_004457276.1	9525	10657	D	ACA1_011160	join(<9525..9788,9853..9992,10080..10239,10325..>10657)	Acanthamoeba castellanii str. Neff	14912487
ACA1_314000	mRNA	ACA1_314000	NW_004457275.1	751	1815	D	ACA1_314000	join(<751..836,908..964,1056..>1815)	Acanthamoeba castellanii str. Neff	14912483
ACA1_314110	mRNA	ACA1_314110	NW_004457275.1	2396	3390	R	ACA1_314110	complement(join(<2396..2445,2486..2767,2856..2934,2994..3057,3129..3203,3284..>3390))	Acanthamoeba castellanii str. Neff	14912482
ACA1_314220	mRNA	ACA1_314220	NW_004457275.1	8773	9257	R	ACA1_314220	complement(join(<8773..9014,9125..9190,9251..>9257))	Acanthamoeba castellanii str. Neff	14912484
ACA1_314230	mRNA	ACA1_314230	NW_004457275.1	9557	11935	R	ACA1_314230	complement(join(<9557..11017,11093..>11935))	Acanthamoeba castellanii str. Neff	14912485
ACA1_344580	mRNA	ACA1_344580	NW_004457274.1	56	2938	R	ACA1_344580	complement(join(<56..129,232..380,474..579,722..780,862..992,1082..1200,1307..1453,1539..1633,1723..1894,1965..2150,2236..2309,2367..2433,2527..2764,2856..>2938))	Acanthamoeba castellanii str. Neff	14912479
ACA1_344690	mRNA	ACA1_344690	NW_004457274.1	6879	9117	D	ACA1_344690	join(<6879..6947,7013..7168,7284..7373,7448..7543,7614..7704,7889..7990,8087..8153,8234..8330,8454..8522,8568..8637,8750..8792,8949..>9117)	Acanthamoeba castellanii str. Neff	14912478
ACA1_344900	mRNA	ACA1_344900	NW_004457274.1	14572	19489	D	ACA1_344900	join(<14572..14923,15013..15097,15172..15340,15444..15560,15628..15712,15811..15896,16003..16074,16132..16226,16305..16452,16574..16897,16971..17034,17128..17534,17604..17697,17804..17862,17954..18087,18175..18297,18427..18529,18659..18776,18898..19023,19106..19291,19350..>19489)	Acanthamoeba castellanii str. Neff	14912481
ACA1_344910	mRNA	ACA1_344910	NW_004457274.1	19923	20315	R	ACA1_344910	complement(<19923..>20315)	Acanthamoeba castellanii str. Neff	14912480
ACA1_151500	mRNA	ACA1_151500	NW_004457273.1	45	1178	D	ACA1_151500	join(<45..73,142..222,323..446,533..681,757..849,920..>1178)	Acanthamoeba castellanii str. Neff	14912473
ACA1_151510	mRNA	ACA1_151510	NW_004457273.1	1782	1970	D	ACA1_151510	<1782..>1970	Acanthamoeba castellanii str. Neff	14912472
ACA1_151920	mRNA	ACA1_151920	NW_004457273.1	11535	12950	D	ACA1_151920	join(<11535..11541,11792..11920,12697..>12950)	Acanthamoeba castellanii str. Neff	14912469
ACA1_151930	mRNA	ACA1_151930	NW_004457273.1	20028	21816	R	ACA1_151930	complement(join(<20028..20295,20380..20469,20560..20811,20908..20958,21255..21343,21414..21476,21733..>21816))	Acanthamoeba castellanii str. Neff	14912477
ACA1_151940	mRNA	ACA1_151940	NW_004457273.1	22232	22622	D	ACA1_151940	join(<22232..22362,22415..>22622)	Acanthamoeba castellanii str. Neff	14912467
ACA1_151950	mRNA	ACA1_151950	NW_004457273.1	23346	24141	R	ACA1_151950	complement(join(<23346..23367,23396..>24141))	Acanthamoeba castellanii str. Neff	14912468
ACA1_151970	mRNA	ACA1_151970	NW_004457273.1	28445	29790	D	ACA1_151970	join(<28445..29191,29251..>29790)	Acanthamoeba castellanii str. Neff	14912475
ACA1_151980	mRNA	ACA1_151980	NW_004457273.1	29822	30589	D	ACA1_151980	join(<29822..29896,29920..29970,30341..>30589)	Acanthamoeba castellanii str. Neff	14912476
ACA1_152090	mRNA	ACA1_152090	NW_004457273.1	30749	31209	D	ACA1_152090	join(<30749..30781,30885..31189,31200..>31209)	Acanthamoeba castellanii str. Neff	14912470
ACA1_152200	mRNA	ACA1_152200	NW_004457273.1	32914	34604	R	ACA1_152200	complement(join(<32914..33120,33235..33464,33509..33629,33858..34064,34153..34268,34410..34452,34566..>34604))	Acanthamoeba castellanii str. Neff	14912471
ACA1_318650	mRNA	ACA1_318650	NW_004457272.1	75	1742	R	ACA1_318650	complement(join(<75..232,358..585,710..890,1128..1518,1663..>1742))	Acanthamoeba castellanii str. Neff	14912466
ACA1_318660	mRNA	ACA1_318660	NW_004457272.1	2200	6078	D	ACA1_318660	<2200..>6078	Acanthamoeba castellanii str. Neff	14912464
ACA1_318670	mRNA	ACA1_318670	NW_004457272.1	6689	10765	D	ACA1_318670	join(<6689..7081,7174..7293,7451..7676,7891..8053,8125..8578,8762..9070,9178..9391,9547..9783,9975..>10765)	Acanthamoeba castellanii str. Neff	14912465
ACA1_399470	mRNA	ACA1_399470	NW_004457271.1	9658	11839	R	ACA1_399470	complement(join(<9658..9666,9719..9865,9949..9985,10099..10141,10353..10573,10700..10745,10858..10920,11007..11428,11465..11500,11583..11632,11723..>11839))	Acanthamoeba castellanii str. Neff	14912421
ACA1_399480	mRNA	ACA1_399480	NW_004457271.1	13221	14342	R	ACA1_399480	complement(join(<13221..13983,14119..>14342))	Acanthamoeba castellanii str. Neff	14912422
ACA1_399490	mRNA	ACA1_399490	NW_004457271.1	14545	18582	R	ACA1_399490	complement(join(<14545..15150,15397..15470,15542..15762,16218..16755,16820..16971,17068..17160,17245..17324,17475..17680,17758..17869,17944..>18582))	Acanthamoeba castellanii str. Neff	14912438
ACA1_399600	mRNA	ACA1_399600	NW_004457271.1	19517	20533	R	ACA1_399600	complement(<19517..>20533)	Acanthamoeba castellanii str. Neff	14912439
ACA1_399610	mRNA	ACA1_399610	NW_004457271.1	20877	21775	R	ACA1_399610	complement(join(<20877..21263,21335..>21775))	Acanthamoeba castellanii str. Neff	14912444
ACA1_399620	mRNA	ACA1_399620	NW_004457271.1	22096	23126	D	ACA1_399620	join(<22096..22150,22277..22372,22520..22717,23056..>23126)	Acanthamoeba castellanii str. Neff	14912431
ACA1_399730	mRNA	ACA1_399730	NW_004457271.1	23382	25542	D	ACA1_399730	join(<23382..23971,24060..24223,24342..24448,24527..24663,24746..24883,24959..25319,25399..>25542)	Acanthamoeba castellanii str. Neff	14912432
ACA1_399740	mRNA	ACA1_399740	NW_004457271.1	26252	26967	R	ACA1_399740	complement(join(<26252..26690,26774..>26967))	Acanthamoeba castellanii str. Neff	14912396
ACA1_399750	mRNA	ACA1_399750	NW_004457271.1	27250	29598	D	ACA1_399750	join(<27250..27588,27780..27881,27991..28057,28172..28278,28451..28563,28675..28790,28860..28972,29073..29136,29240..29392,29495..>29598)	Acanthamoeba castellanii str. Neff	14912397
ACA1_399770	mRNA	ACA1_399770	NW_004457271.1	31559	34512	D	ACA1_399770	join(<31559..31627,31704..31870,31900..31941,32078..32375,32398..32808,32893..33307,33437..33586,33649..33777,33858..34007,34119..34177,34297..>34512)	Acanthamoeba castellanii str. Neff	14912416
ACA1_399780	mRNA	ACA1_399780	NW_004457271.1	34644	35300	R	ACA1_399780	complement(join(<34644..34807,34890..35019,35095..35172,35229..>35300))	Acanthamoeba castellanii str. Neff	14912417
ACA1_399790	mRNA	ACA1_399790	NW_004457271.1	35610	41266	R	ACA1_399790	complement(join(<35610..35698,35807..35968,36077..36200,36294..36382,36452..36527,36626..36886,37014..37119,37239..37345,37440..37535,37625..37690,37782..37850,37931..38035,38131..38268,38387..38444,38554..38656,38824..39006,39111..39240,39358..39484,39580..39713,39833..39961,40069..40153,40262..40385,40474..40534,40690..40860,41008..41084,41194..>41266))	Acanthamoeba castellanii str. Neff	14912386
ACA1_399800	mRNA	ACA1_399800	NW_004457271.1	41783	42466	D	ACA1_399800	join(<41783..42073,42174..42310,42373..>42466)	Acanthamoeba castellanii str. Neff	14912440
ACA1_399810	mRNA	ACA1_399810	NW_004457271.1	42587	42929	R	ACA1_399810	complement(join(<42587..42753,42848..>42929))	Acanthamoeba castellanii str. Neff	14912418
ACA1_399820	mRNA	ACA1_399820	NW_004457271.1	43074	43972	D	ACA1_399820	join(<43074..43297,43355..43490,43596..43730,43808..>43972)	Acanthamoeba castellanii str. Neff	14912419
ACA1_399830	mRNA	ACA1_399830	NW_004457271.1	44094	45654	R	ACA1_399830	complement(join(<44094..44195,44268..44406,44480..44616,44682..44748,44831..44919,44996..45088,45157..45251,45336..>45654))	Acanthamoeba castellanii str. Neff	14912402
ACA1_399840	mRNA	ACA1_399840	NW_004457271.1	45730	46383	R	ACA1_399840	complement(<45730..>46383)	Acanthamoeba castellanii str. Neff	14912403
ACA1_399850	mRNA	ACA1_399850	NW_004457271.1	46646	47883	R	ACA1_399850	complement(join(<46646..46735,46815..46870,46938..47055,47138..47209,47293..47377,47457..47490,47566..47754,47841..>47883))	Acanthamoeba castellanii str. Neff	14912389
ACA1_399860	mRNA	ACA1_399860	NW_004457271.1	48169	51575	D	ACA1_399860	join(<48169..48291,48359..48840,48922..49042,49107..49257,49324..49442,49512..49625,49691..49840,49915..49974,50039..50180,50243..50332,50400..50526,50588..50704,50764..50857,50928..51048,51114..51204,51274..51342,51416..>51575)	Acanthamoeba castellanii str. Neff	14912390
ACA1_399870	mRNA	ACA1_399870	NW_004457271.1	52216	54112	D	ACA1_399870	join(<52216..52341,52574..52641,52750..52828,52960..53009,53086..53213,53298..53374,53460..53496,53576..53680,53761..53873,53960..>54112)	Acanthamoeba castellanii str. Neff	14912405
ACA1_399880	mRNA	ACA1_399880	NW_004457271.1	54579	58430	D	ACA1_399880	join(<54579..54675,54727..54785,54870..55058,55182..55516,55597..55725,55836..56003,56115..56220,56318..56360,56440..56568,56820..56902,56990..57090,57155..57317,57401..57540,57630..57702,57796..57894,57993..58072,58208..58262,58353..>58430)	Acanthamoeba castellanii str. Neff	14912445
ACA1_399890	mRNA	ACA1_399890	NW_004457271.1	58685	59197	D	ACA1_399890	join(<58685..58825,58856..>59197)	Acanthamoeba castellanii str. Neff	14912446
ACA1_399900	mRNA	ACA1_399900	NW_004457271.1	59275	59793	R	ACA1_399900	complement(join(<59275..59344,59419..59540,59614..>59793))	Acanthamoeba castellanii str. Neff	14912451
ACA1_399920	mRNA	ACA1_399920	NW_004457271.1	63378	65414	R	ACA1_399920	complement(join(<63378..63467,63551..63596,63669..63763,63847..63966,64062..64170,64265..64338,64488..64592,64688..64801,64952..65114,65311..>65414))	Acanthamoeba castellanii str. Neff	14912462
ACA1_399930	mRNA	ACA1_399930	NW_004457271.1	66651	70627	D	ACA1_399930	join(<66651..66671,66829..66929,67157..67294,67423..67494,67570..67636,67721..67906,68029..68133,68217..68256,68309..68592,68864..69381,69455..69701,69850..69976,70069..70212,70323..70426,70538..>70627)	Acanthamoeba castellanii str. Neff	14912463
ACA1_399940	mRNA	ACA1_399940	NW_004457271.1	72311	80646	R	ACA1_399940	complement(join(<72311..72496,72580..72739,72888..72988,73078..73177,73263..73439,73634..73787,73921..73982,74124..74197,74344..74569,74656..74914,75014..75276,75345..75445,75569..75833,75990..76026,76164..76590,76626..76821,76964..77209,77348..77407,77494..77674,77785..77864,77941..79028,79097..79294,79391..80154,80238..80380,80498..>80646))	Acanthamoeba castellanii str. Neff	14912420
ACA1_399950	mRNA	ACA1_399950	NW_004457271.1	80974	81789	D	ACA1_399950	join(<80974..81298,81404..>81789)	Acanthamoeba castellanii str. Neff	14912398
ACA1_399960	mRNA	ACA1_399960	NW_004457271.1	81947	83569	R	ACA1_399960	complement(join(<81947..82256,82355..82524,82616..82715,82791..82967,83194..83319,83379..>83569))	Acanthamoeba castellanii str. Neff	14912399
ACA1_399970	mRNA	ACA1_399970	NW_004457271.1	83972	87236	D	ACA1_399970	join(<83972..84122,84191..84938,85036..85131,85200..85493,85576..86069,86148..86354,86440..86576,86654..86755,86846..86911,86985..>87236)	Acanthamoeba castellanii str. Neff	14912400
ACA1_400010	mRNA	ACA1_400010	NW_004457271.1	94037	95056	D	ACA1_400010	<94037..>95056	Acanthamoeba castellanii str. Neff	14912459
ACA1_400020	mRNA	ACA1_400020	NW_004457271.1	95151	100525	R	ACA1_400020	complement(join(<95151..95247,95342..95521,95607..95728,95826..95969,96075..96278,96369..96463,96542..96695,96837..96929,97020..97144,97299..97394,97508..97622,97930..98040,98133..98276,98421..98624,98948..99042,99120..99273,99401..99493,99586..99710,99862..99957,100074..100199,100444..>100525))	Acanthamoeba castellanii str. Neff	14912460
ACA1_400130	mRNA	ACA1_400130	NW_004457271.1	101635	102414	D	ACA1_400130	join(<101635..101877,101975..102034,102082..>102414)	Acanthamoeba castellanii str. Neff	14912447
ACA1_400160	mRNA	ACA1_400160	NW_004457271.1	109713	110865	R	ACA1_400160	complement(join(<109713..109852,109961..110030,110091..110183,110277..110463,110562..110674,110767..>110865))	Acanthamoeba castellanii str. Neff	14912413
ACA1_400170	mRNA	ACA1_400170	NW_004457271.1	111019	112644	D	ACA1_400170	join(<111019..111876,111979..112381,112472..>112644)	Acanthamoeba castellanii str. Neff	14912414
ACA1_400180	mRNA	ACA1_400180	NW_004457271.1	112718	114231	R	ACA1_400180	complement(join(<112718..112794,112863..112912,112998..113071,113148..113198,113290..113412,113489..113776,113881..>114231))	Acanthamoeba castellanii str. Neff	14912423
ACA1_400190	mRNA	ACA1_400190	NW_004457271.1	114341	115101	D	ACA1_400190	join(<114341..114442,114533..114606,114684..114760,114893..>115101)	Acanthamoeba castellanii str. Neff	14912424
ACA1_400200	mRNA	ACA1_400200	NW_004457271.1	116212	117726	R	ACA1_400200	complement(join(<116212..116730,116836..116877,116970..117203,117223..>117726))	Acanthamoeba castellanii str. Neff	14912425
ACA1_400210	mRNA	ACA1_400210	NW_004457271.1	119028	121216	R	ACA1_400210	complement(join(<119028..119182,119266..119434,119528..119579,119669..119960,120129..120248,120334..120510,120607..120658,120910..121154,121186..>121216))	Acanthamoeba castellanii str. Neff	14912392
ACA1_400220	mRNA	ACA1_400220	NW_004457271.1	121589	122732	R	ACA1_400220	complement(join(<121589..121725,121849..121956,122033..122121,122288..122387,122478..122596,122680..>122732))	Acanthamoeba castellanii str. Neff	14912393
ACA1_400230	mRNA	ACA1_400230	NW_004457271.1	123225	126119	R	ACA1_400230	complement(join(<123225..123387,123467..123583,123723..123806,123894..124035,124128..124302,124396..124481,124594..124693,124813..124982,125053..125302,125436..125549,125674..125829,125961..>126119))	Acanthamoeba castellanii str. Neff	14912406
ACA1_400240	mRNA	ACA1_400240	NW_004457271.1	126804	128563	R	ACA1_400240	complement(join(<126804..128166,128259..>128563))	Acanthamoeba castellanii str. Neff	14912407
ACA1_400250	mRNA	ACA1_400250	NW_004457271.1	130424	131058	R	ACA1_400250	complement(join(<130424..130856,130898..>131058))	Acanthamoeba castellanii str. Neff	14912436
ACA1_400260	mRNA	ACA1_400260	NW_004457271.1	131228	131994	D	ACA1_400260	join(<131228..131345,131417..131525,131608..131653,131734..>131994)	Acanthamoeba castellanii str. Neff	14912437
ACA1_400280	mRNA	ACA1_400280	NW_004457271.1	136190	138035	D	ACA1_400280	join(<136190..136270,136437..136565,136651..136738,136842..136949,137038..137528,137610..137682,137755..>138035)	Acanthamoeba castellanii str. Neff	14912442
ACA1_400290	mRNA	ACA1_400290	NW_004457271.1	140286	142002	R	ACA1_400290	complement(join(<140286..140384,140479..140625,140718..140847,140938..140987,141189..141315,141421..141659,141892..>142002))	Acanthamoeba castellanii str. Neff	14912443
ACA1_400300	mRNA	ACA1_400300	NW_004457271.1	142572	145206	D	ACA1_400300	join(<142572..142648,142730..142790,142877..143230,143477..144005,144088..144444,144515..144626,144714..>145206)	Acanthamoeba castellanii str. Neff	14912449
ACA1_400310	mRNA	ACA1_400310	NW_004457271.1	145365	147187	R	ACA1_400310	complement(join(<145365..145500,145583..145982,146072..146201,146299..146427,146514..146627,146772..146947,147016..>147187))	Acanthamoeba castellanii str. Neff	14912450
ACA1_400320	mRNA	ACA1_400320	NW_004457271.1	147500	159135	D	ACA1_400320	join(<147500..147526,147702..148823,148959..148992,149085..149197,149271..149399,149501..149716,149817..149897,149995..150256,150333..150490,150579..150728,150859..150931,151033..151178,151251..151294,151383..151452,151533..152966,153043..153316,153403..153490,153571..153729,153816..153910,154007..154078,154183..154361,154475..154569,154669..154792,154925..155893,155975..156499,156604..156844,156974..157136,157231..157347,157466..157686,157860..157986,158106..158203,158303..>159135)	Acanthamoeba castellanii str. Neff	14912452
ACA1_400330	mRNA	ACA1_400330	NW_004457271.1	159283	163107	R	ACA1_400330	complement(join(<159283..159426,159565..159889,159990..160088,160222..160568,160650..160839,160995..161113,161254..161521,161611..161698,161794..161866,162023..162177,162252..162367,162543..162766,162844..>163107))	Acanthamoeba castellanii str. Neff	14912453
ACA1_400350	mRNA	ACA1_400350	NW_004457271.1	166938	170392	D	ACA1_400350	join(<166938..167020,167295..167544,167636..168033,168133..168293,168389..168586,168673..168824,168926..169042,169146..169268,169280..169483,169554..170161,170239..>170392)	Acanthamoeba castellanii str. Neff	14912429
ACA1_400360	mRNA	ACA1_400360	NW_004457271.1	170603	172777	R	ACA1_400360	complement(join(<170603..170635,170731..170904,170999..171126,171285..171362,171480..171575,171700..171794,171907..172056,172171..172337,172478..>172777))	Acanthamoeba castellanii str. Neff	14912430
ACA1_400370	mRNA	ACA1_400370	NW_004457271.1	173216	174851	R	ACA1_400370	complement(join(<173216..173441,173546..173787,173906..174016,174100..174204,174274..174350,174480..174564,174750..>174851))	Acanthamoeba castellanii str. Neff	14912394
ACA1_400380	mRNA	ACA1_400380	NW_004457271.1	174952	176767	R	ACA1_400380	complement(join(<174952..175185,175323..175466,175556..175707,175794..175956,176052..176103,176179..176308,176402..176584,176698..>176767))	Acanthamoeba castellanii str. Neff	14912395
ACA1_400390	mRNA	ACA1_400390	NW_004457271.1	177069	180880	R	ACA1_400390	complement(join(<177069..177854,177941..178247,178343..178489,178567..178708,179308..179449,179552..179691,179765..179904,179982..180074,180212..180273,180367..180552,180746..>180880))	Acanthamoeba castellanii str. Neff	14912387
ACA1_400510	mRNA	ACA1_400510	NW_004457271.1	183187	183625	D	ACA1_400510	join(<183187..183313,183399..>183625)	Acanthamoeba castellanii str. Neff	14912426
ACA1_400520	mRNA	ACA1_400520	NW_004457271.1	183887	184300	D	ACA1_400520	join(<183887..183992,184062..>184300)	Acanthamoeba castellanii str. Neff	14912427
ACA1_400540	mRNA	ACA1_400540	NW_004457271.1	186362	187502	R	ACA1_400540	complement(join(<186362..186593,186706..186829,186956..187301,187410..>187502))	Acanthamoeba castellanii str. Neff	14912433
ACA1_400550	mRNA	ACA1_400550	NW_004457271.1	188133	189446	R	ACA1_400550	complement(join(<188133..188230,188324..188426,188510..188762,188840..188883,189027..>189446))	Acanthamoeba castellanii str. Neff	14912434
ACA1_400560	mRNA	ACA1_400560	NW_004457271.1	189909	195771	D	ACA1_400560	join(<189909..190241,190253..190706,190844..191016,191101..191185,191301..191422,191541..191661,191749..191805,191913..192046,192122..192297,192402..192520,192683..192775,192877..192995,193150..193215,193391..193436,193548..193660,193763..193886,193981..194180,194259..194346,194437..194565,194715..194840,195212..195385,195481..195585,195665..>195771)	Acanthamoeba castellanii str. Neff	14912435
ACA1_400570	mRNA	ACA1_400570	NW_004457271.1	196141	198395	R	ACA1_400570	complement(join(<196141..196283,196359..196480,196557..196733,196797..196963,197051..197238,197460..198113,198200..>198395))	Acanthamoeba castellanii str. Neff	14912391
ACA1_400580	mRNA	ACA1_400580	NW_004457271.1	198557	199854	R	ACA1_400580	complement(join(<198557..198916,199004..199109,199213..199375,199499..199635,199739..>199854))	Acanthamoeba castellanii str. Neff	14912454
ACA1_400590	mRNA	ACA1_400590	NW_004457271.1	200275	201363	R	ACA1_400590	complement(join(<200275..200463,200555..200681,200772..200997,201048..201154,201236..>201363))	Acanthamoeba castellanii str. Neff	14912455
ACA1_400800	mRNA	ACA1_400800	NW_004457271.1	202786	203565	R	ACA1_400800	complement(join(<202786..202928,203018..203123,203219..203392,203503..>203565))	Acanthamoeba castellanii str. Neff	14912456
ACA1_400910	mRNA	ACA1_400910	NW_004457271.1	205312	207476	R	ACA1_400910	complement(join(<205312..205495,205575..205664,205730..205851,205919..206034,206095..206273,206352..206533,206638..206875,206956..207054,207129..207244,207282..>207476))	Acanthamoeba castellanii str. Neff	14912409
ACA1_401020	mRNA	ACA1_401020	NW_004457271.1	208914	211193	R	ACA1_401020	complement(join(<208914..208997,209089..209283,209368..209511,210417..210494,210570..210812,210886..211119,211170..>211193))	Acanthamoeba castellanii str. Neff	14912410
ACA1_401230	mRNA	ACA1_401230	NW_004457271.1	211644	212645	R	ACA1_401230	complement(join(<211644..211811,211871..212067,212546..>212645))	Acanthamoeba castellanii str. Neff	14912404
ACA1_272950	mRNA	ACA1_272950	NW_004457270.1	33	1398	D	ACA1_272950	join(<33..146,293..773,883..986,1065..1141,1245..>1398)	Acanthamoeba castellanii str. Neff	14912362
ACA1_272960	mRNA	ACA1_272960	NW_004457270.1	1499	5588	R	ACA1_272960	complement(join(<1499..1849,1936..2315,2375..2445,2560..2735,2821..2913,3013..3265,3314..3498,3585..3944,4026..4249,4340..4513,4573..4729,4823..4954,5107..5189,5355..5399,5489..>5588))	Acanthamoeba castellanii str. Neff	14912354
ACA1_272970	mRNA	ACA1_272970	NW_004457270.1	5805	7830	R	ACA1_272970	complement(join(<5805..6463,6523..6706,6786..6912,7027..7094,7161..7268,7336..7439,7538..7613,7753..>7830))	Acanthamoeba castellanii str. Neff	14912355
ACA1_273080	mRNA	ACA1_273080	NW_004457270.1	9487	12035	R	ACA1_273080	complement(join(<9487..9719,9800..9984,10089..10195,10267..10368,10491..10567,10639..10705,10777..10962,11026..11194,11270..11415,11490..11684,11763..11908,11981..>12035))	Acanthamoeba castellanii str. Neff	14912377
ACA1_273090	mRNA	ACA1_273090	NW_004457270.1	12098	14690	R	ACA1_273090	complement(join(<12098..12276,12369..12533,12612..12677,12752..12839,12947..13056,13154..13321,13398..13486,13582..13655,13752..13895,14167..14234,14486..>14690))	Acanthamoeba castellanii str. Neff	14912310
ACA1_273100	mRNA	ACA1_273100	NW_004457270.1	14894	16101	R	ACA1_273100	complement(join(<14894..14993,15091..15170,15263..15333,15416..15444,15520..15591,15661..15716,15776..15834,15954..>16101))	Acanthamoeba castellanii str. Neff	14912366
ACA1_273110	mRNA	ACA1_273110	NW_004457270.1	16273	17304	D	ACA1_273110	join(<16273..16458,16552..16644,16719..16755,16775..16903,17090..>17304)	Acanthamoeba castellanii str. Neff	14912367
ACA1_273220	mRNA	ACA1_273220	NW_004457270.1	19385	20359	D	ACA1_273220	<19385..>20359	Acanthamoeba castellanii str. Neff	14912384
ACA1_273230	mRNA	ACA1_273230	NW_004457270.1	21110	21481	R	ACA1_273230	complement(<21110..>21481)	Acanthamoeba castellanii str. Neff	14912385
ACA1_273340	mRNA	ACA1_273340	NW_004457270.1	21627	21845	D	ACA1_273340	<21627..>21845	Acanthamoeba castellanii str. Neff	14912363
ACA1_273350	mRNA	ACA1_273350	NW_004457270.1	22348	22713	R	ACA1_273350	complement(<22348..>22713)	Acanthamoeba castellanii str. Neff	14912364
ACA1_273460	mRNA	ACA1_273460	NW_004457270.1	24315	26682	R	ACA1_273460	complement(join(<24315..24528,24970..25142,25230..25519,25769..>26682))	Acanthamoeba castellanii str. Neff	14912327
ACA1_273470	mRNA	ACA1_273470	NW_004457270.1	27037	27457	R	ACA1_273470	complement(join(<27037..27179,27388..>27457))	Acanthamoeba castellanii str. Neff	14912328
ACA1_273480	mRNA	ACA1_273480	NW_004457270.1	27677	28066	D	ACA1_273480	join(<27677..27799,27862..27945,28061..>28066)	Acanthamoeba castellanii str. Neff	14912329
ACA1_273490	mRNA	ACA1_273490	NW_004457270.1	28884	29937	D	ACA1_273490	join(<28884..29507,29584..>29937)	Acanthamoeba castellanii str. Neff	14912325
ACA1_273500	mRNA	ACA1_273500	NW_004457270.1	30166	30999	D	ACA1_273500	join(<30166..30294,30442..30646,30764..>30999)	Acanthamoeba castellanii str. Neff	14912326
ACA1_273520	mRNA	ACA1_273520	NW_004457270.1	34541	44034	D	ACA1_273520	join(<34541..34648,34752..34898,35062..35363,35425..35550,35593..35702,35788..35959,36037..36658,36727..36877,37012..37161,37259..37398,37446..37620,37659..37886,37979..38178,38271..38442,38515..38644,38715..38791,38859..39024,39093..39178,39258..39924,40038..40459,40566..40688,40788..40945,41072..41320,41479..41619,41698..41767,41846..41973,42056..42646,42734..43569,43662..>44034)	Acanthamoeba castellanii str. Neff	14912379
ACA1_273530	mRNA	ACA1_273530	NW_004457270.1	44946	46952	D	ACA1_273530	join(<44946..44972,45023..45176,45274..45302,45378..45588,45657..45815,45915..46070,46148..46309,46416..46456,46624..46696,46787..46872,46923..>46952)	Acanthamoeba castellanii str. Neff	14912380
ACA1_273540	mRNA	ACA1_273540	NW_004457270.1	47136	48595	R	ACA1_273540	complement(join(<47136..47487,47567..47750,47877..47998,48139..48369,48493..>48595))	Acanthamoeba castellanii str. Neff	14912338
ACA1_273750	mRNA	ACA1_273750	NW_004457270.1	48901	50531	D	ACA1_273750	join(<48901..48928,49016..49101,49180..49342,49366..49489,49558..49790,49865..50438,50477..>50531)	Acanthamoeba castellanii str. Neff	14912339
ACA1_273760	mRNA	ACA1_273760	NW_004457270.1	51228	52430	R	ACA1_273760	complement(join(<51228..51872,52004..52226,52306..>52430))	Acanthamoeba castellanii str. Neff	14912361
ACA1_273770	mRNA	ACA1_273770	NW_004457270.1	52505	53764	R	ACA1_273770	complement(join(<52505..52999,53075..53224,53290..53430,53492..>53764))	Acanthamoeba castellanii str. Neff	14912312
ACA1_273780	mRNA	ACA1_273780	NW_004457270.1	53864	57077	R	ACA1_273780	complement(join(<53864..54349,54421..54599,54785..54968,55100..55221,55300..55530,55664..55912,56035..56205,56296..56440,56553..56659,56822..56938,57065..>57077))	Acanthamoeba castellanii str. Neff	14912313
ACA1_273790	mRNA	ACA1_273790	NW_004457270.1	57361	58278	R	ACA1_273790	complement(<57361..>58278)	Acanthamoeba castellanii str. Neff	14912314
ACA1_273800	mRNA	ACA1_273800	NW_004457270.1	58791	59469	R	ACA1_273800	complement(join(<58791..58918,58987..59019,59097..59228,59358..>59469))	Acanthamoeba castellanii str. Neff	14912311
ACA1_273810	mRNA	ACA1_273810	NW_004457270.1	59662	60691	D	ACA1_273810	join(<59662..59845,59875..60063,60146..60243,60299..>60691)	Acanthamoeba castellanii str. Neff	14912315
ACA1_273820	mRNA	ACA1_273820	NW_004457270.1	60737	62730	R	ACA1_273820	complement(join(<60737..61024,61079..61294,61372..61496,61571..61709,61771..61941,62046..62144,62329..>62730))	Acanthamoeba castellanii str. Neff	14912316
ACA1_273830	mRNA	ACA1_273830	NW_004457270.1	63306	66855	D	ACA1_273830	join(<63306..63672,63783..63865,63954..64016,64104..64181,64265..64324,64408..64514,64596..64698,64770..64846,64929..65020,65104..65230,65321..65445,65717..65857,65930..66315,66385..>66855)	Acanthamoeba castellanii str. Neff	14912319
ACA1_273840	mRNA	ACA1_273840	NW_004457270.1	66984	67373	R	ACA1_273840	complement(<66984..>67373)	Acanthamoeba castellanii str. Neff	14912320
ACA1_273850	mRNA	ACA1_273850	NW_004457270.1	67659	69319	D	ACA1_273850	join(<67659..67765,67879..68012,68090..68215,68319..68441,68592..68711,68787..68954,69072..>69319)	Acanthamoeba castellanii str. Neff	14912317
ACA1_273860	mRNA	ACA1_273860	NW_004457270.1	69562	72891	D	ACA1_273860	join(<69562..69599,69840..69952,70069..70179,70326..70436,70575..70712,70819..70904,70993..71084,71207..71349,71423..71597,71700..72117,72210..72346,72426..>72891)	Acanthamoeba castellanii str. Neff	14912318
ACA1_273870	mRNA	ACA1_273870	NW_004457270.1	73000	74680	R	ACA1_273870	complement(join(<73000..73151,73231..73384,73442..73708,73824..73954,74113..>74680))	Acanthamoeba castellanii str. Neff	14912340
ACA1_273880	mRNA	ACA1_273880	NW_004457270.1	76515	78528	R	ACA1_273880	complement(join(<76515..76990,77075..77231,77321..77483,77563..77660,77760..77862,77978..78098,78201..78293,78465..>78528))	Acanthamoeba castellanii str. Neff	14912330
ACA1_273890	mRNA	ACA1_273890	NW_004457270.1	79167	80746	R	ACA1_273890	complement(join(<79167..79273,79288..79557,79646..79873,80018..80129,80235..80435,80541..80653,80728..>80746))	Acanthamoeba castellanii str. Neff	14912331
ACA1_273900	mRNA	ACA1_273900	NW_004457270.1	81039	81723	R	ACA1_273900	complement(join(<81039..81186,81320..81530,81642..>81723))	Acanthamoeba castellanii str. Neff	14912348
ACA1_274030	mRNA	ACA1_274030	NW_004457270.1	83724	85457	D	ACA1_274030	join(<83724..83899,83984..84039,84169..84296,84398..84542,84629..84722,84973..85215,85298..>85457)	Acanthamoeba castellanii str. Neff	14912349
ACA1_274140	mRNA	ACA1_274140	NW_004457270.1	86497	87403	D	ACA1_274140	join(<86497..86527,86659..86825,86927..>87403)	Acanthamoeba castellanii str. Neff	14912334
ACA1_274150	mRNA	ACA1_274150	NW_004457270.1	87795	89276	R	ACA1_274150	complement(join(<87795..87815,87899..88039,88134..88232,88303..88418,88576..89085,89234..>89276))	Acanthamoeba castellanii str. Neff	14912335
ACA1_274160	mRNA	ACA1_274160	NW_004457270.1	89523	89933	D	ACA1_274160	join(<89523..89681,89787..>89933)	Acanthamoeba castellanii str. Neff	14912336
ACA1_274370	mRNA	ACA1_274370	NW_004457270.1	93250	95359	D	ACA1_274370	join(<93250..93337,93419..93649,93732..94197,94278..94449,94537..95041,95136..>95359)	Acanthamoeba castellanii str. Neff	14912337
ACA1_274380	mRNA	ACA1_274380	NW_004457270.1	95506	98847	R	ACA1_274380	complement(join(<95506..95721,95815..96064,96163..96689,96735..96799,96903..97600,97684..97785,97863..98080,98155..98271,98345..98452,98512..98614,98696..>98847))	Acanthamoeba castellanii str. Neff	14912352
ACA1_274390	mRNA	ACA1_274390	NW_004457270.1	99331	101343	D	ACA1_274390	join(<99331..99450,99669..99857,99669..99915,100053..100172,100260..100382,100638..100721,100795..100883,101035..101137,101222..>101343)	Acanthamoeba castellanii str. Neff	14912353
ACA1_274400	mRNA	ACA1_274400	NW_004457270.1	101538	103208	D	ACA1_274400	join(<101538..102500,102663..102850,102980..>103208)	Acanthamoeba castellanii str. Neff	14912365
ACA1_274410	mRNA	ACA1_274410	NW_004457270.1	103307	104139	D	ACA1_274410	join(<103307..103464,103585..103651,103822..103940,104034..>104139)	Acanthamoeba castellanii str. Neff	14912323
ACA1_274420	mRNA	ACA1_274420	NW_004457270.1	104709	105567	D	ACA1_274420	join(<104709..105259,105336..>105567)	Acanthamoeba castellanii str. Neff	14912324
ACA1_274530	mRNA	ACA1_274530	NW_004457270.1	106215	107022	D	ACA1_274530	join(<106215..106354,106470..106596,106858..>107022)	Acanthamoeba castellanii str. Neff	14912321
ACA1_274540	mRNA	ACA1_274540	NW_004457270.1	109400	110594	D	ACA1_274540	join(<109400..109631,109714..109882,110039..>110594)	Acanthamoeba castellanii str. Neff	14912322
ACA1_274560	mRNA	ACA1_274560	NW_004457270.1	111464	113212	D	ACA1_274560	<111464..>113212	Acanthamoeba castellanii str. Neff	14912307
ACA1_274570	mRNA	ACA1_274570	NW_004457270.1	113850	115920	D	ACA1_274570	join(<113850..113922,114018..114146,114259..114930,115013..>115920)	Acanthamoeba castellanii str. Neff	14912308
ACA1_274580	mRNA	ACA1_274580	NW_004457270.1	115992	118069	R	ACA1_274580	complement(join(<115992..116049,116165..116274,116462..116582,116687..116788,116867..116931,117036..117107,117272..117337,117406..117538,117630..117724,117743..117768,118042..>118069))	Acanthamoeba castellanii str. Neff	14912309
ACA1_274590	mRNA	ACA1_274590	NW_004457270.1	118338	118637	D	ACA1_274590	<118338..>118637	Acanthamoeba castellanii str. Neff	14912371
ACA1_274600	mRNA	ACA1_274600	NW_004457270.1	118704	119093	D	ACA1_274600	<118704..>119093	Acanthamoeba castellanii str. Neff	14912372
ACA1_274610	mRNA	ACA1_274610	NW_004457270.1	119837	121335	D	ACA1_274610	join(<119837..119998,120045..120114,120129..121018,121114..>121335)	Acanthamoeba castellanii str. Neff	14912373
ACA1_274620	mRNA	ACA1_274620	NW_004457270.1	121564	121932	D	ACA1_274620	<121564..>121932	Acanthamoeba castellanii str. Neff	14912374
ACA1_274740	mRNA	ACA1_274740	NW_004457270.1	123299	123929	R	ACA1_274740	complement(join(<123299..123356,123478..123572,123591..123616,123902..>123929))	Acanthamoeba castellanii str. Neff	14912375
ACA1_274750	mRNA	ACA1_274750	NW_004457270.1	124338	126346	R	ACA1_274750	complement(join(<124338..125271,125319..>126346))	Acanthamoeba castellanii str. Neff	14912376
ACA1_274870	mRNA	ACA1_274870	NW_004457270.1	130477	131404	R	ACA1_274870	complement(join(<130477..130662,130687..130724,130754..130926,131016..131144,131220..>131404))	Acanthamoeba castellanii str. Neff	14912350
ACA1_274880	mRNA	ACA1_274880	NW_004457270.1	131532	133136	D	ACA1_274880	join(<131532..131844,131905..131972,132133..132286,132365..132440,132517..132609,132701..132806,132884..132951,133016..>133136)	Acanthamoeba castellanii str. Neff	14912351
ACA1_274900	mRNA	ACA1_274900	NW_004457270.1	134498	135876	R	ACA1_274900	complement(join(<134498..134696,134784..134883,134976..135189,135294..135398,135495..135572,135656..135770,135845..>135876))	Acanthamoeba castellanii str. Neff	14912369
ACA1_274910	mRNA	ACA1_274910	NW_004457270.1	136060	139189	R	ACA1_274910	complement(join(<136060..137685,137735..>139189))	Acanthamoeba castellanii str. Neff	14912370
ACA1_274920	mRNA	ACA1_274920	NW_004457270.1	140325	142072	D	ACA1_274920	join(<140325..140512,140577..140740,140811..141376,141470..>142072)	Acanthamoeba castellanii str. Neff	14912381
ACA1_274930	mRNA	ACA1_274930	NW_004457270.1	142193	143557	R	ACA1_274930	complement(join(<142193..142362,142466..142635,142726..142768,142848..142897,143095..143134,143239..143361,143446..>143557))	Acanthamoeba castellanii str. Neff	14912382
ACA1_274950	mRNA	ACA1_274950	NW_004457270.1	144379	145244	R	ACA1_274950	complement(join(<144379..144472,144619..>145244))	Acanthamoeba castellanii str. Neff	14912342
ACA1_274960	mRNA	ACA1_274960	NW_004457270.1	145714	147973	R	ACA1_274960	complement(join(<145714..147183,147299..>147973))	Acanthamoeba castellanii str. Neff	14912343
ACA1_274970	mRNA	ACA1_274970	NW_004457270.1	149112	150812	D	ACA1_274970	join(<149112..149244,149333..149405,149480..149532,149612..149784,149915..149980,150074..150167,150237..150313,150425..150581,150679..>150812)	Acanthamoeba castellanii str. Neff	14912344
ACA1_274980	mRNA	ACA1_274980	NW_004457270.1	150865	152748	R	ACA1_274980	complement(join(<150865..151386,151471..151823,151897..152370,152475..152603,152670..>152748))	Acanthamoeba castellanii str. Neff	14912345
ACA1_274990	mRNA	ACA1_274990	NW_004457270.1	153227	153886	R	ACA1_274990	complement(join(<153227..153766,153794..>153886))	Acanthamoeba castellanii str. Neff	14912359
ACA1_275000	mRNA	ACA1_275000	NW_004457270.1	153989	154291	R	ACA1_275000	complement(join(<153989..154182,154228..>154291))	Acanthamoeba castellanii str. Neff	14912360
ACA1_275010	mRNA	ACA1_275010	NW_004457270.1	156159	156999	D	ACA1_275010	join(<156159..156179,156636..156699,156854..>156999)	Acanthamoeba castellanii str. Neff	14912346
ACA1_275020	mRNA	ACA1_275020	NW_004457270.1	158012	158299	D	ACA1_275020	join(<158012..158104,158168..>158299)	Acanthamoeba castellanii str. Neff	14912347
ACA1_275030	mRNA	ACA1_275030	NW_004457270.1	159546	160352	R	ACA1_275030	complement(join(<159546..160026,160096..>160352))	Acanthamoeba castellanii str. Neff	14912332
ACA1_275040	mRNA	ACA1_275040	NW_004457270.1	163000	163852	D	ACA1_275040	join(<163000..163414,163479..>163852)	Acanthamoeba castellanii str. Neff	14912333
ACA1_275160	mRNA	ACA1_275160	NW_004457270.1	167261	169193	D	ACA1_275160	join(<167261..167317,167455..167628,167796..167937,168069..168321,168442..168538,168635..168700,168836..168950,169066..>169193)	Acanthamoeba castellanii str. Neff	14912357
ACA1_275170	mRNA	ACA1_275170	NW_004457270.1	169344	169500	R	ACA1_275170	complement(<169344..>169500)	Acanthamoeba castellanii str. Neff	14912358
ACA1_275280	mRNA	ACA1_275280	NW_004457270.1	172692	173652	R	ACA1_275280	complement(join(<172692..172822,172908..173022,173169..173351,173485..>173652))	Acanthamoeba castellanii str. Neff	14912383
ACA1_361660	mRNA	ACA1_361660	NW_004457269.1	309	1736	D	ACA1_361660	join(<309..522,597..662,770..832,1063..1108,1173..1287,1392..>1736)	Acanthamoeba castellanii str. Neff	14912200
ACA1_361770	mRNA	ACA1_361770	NW_004457269.1	7950	9481	D	ACA1_361770	join(<7950..7958,8006..8208,8288..8465,8556..8681,8750..8845,8946..9096,9201..9317,9399..>9481)	Acanthamoeba castellanii str. Neff	14912282
ACA1_361880	mRNA	ACA1_361880	NW_004457269.1	14572	15773	R	ACA1_361880	complement(join(<14572..14854,15027..15086,15256..15340,15460..15570,15705..>15773))	Acanthamoeba castellanii str. Neff	14912264
ACA1_361990	mRNA	ACA1_361990	NW_004457269.1	20846	23144	D	ACA1_361990	join(<20846..20907,21043..21179,21284..21353,21461..21759,21851..22006,22102..22276,22373..22794,22918..>23144)	Acanthamoeba castellanii str. Neff	14912266
ACA1_362100	mRNA	ACA1_362100	NW_004457269.1	23349	24788	R	ACA1_362100	complement(join(<23349..23483,23589..23657,23772..23936,24041..24383,24511..>24788))	Acanthamoeba castellanii str. Neff	14912202
ACA1_362110	mRNA	ACA1_362110	NW_004457269.1	25132	30213	D	ACA1_362110	join(<25132..25252,25339..25476,25661..25798,25901..26054,26127..26195,26279..26473,26579..26674,26803..26945,27443..27744,27805..27866,27940..28071,28214..28431,28719..28795,29095..29216,29316..29457,29575..29621,29685..>30213)	Acanthamoeba castellanii str. Neff	14912273
ACA1_362120	mRNA	ACA1_362120	NW_004457269.1	30314	31609	D	ACA1_362120	join(<30314..30497,30598..30777,30879..30979,31082..31391,31491..>31609)	Acanthamoeba castellanii str. Neff	14912274
ACA1_362130	mRNA	ACA1_362130	NW_004457269.1	32018	32576	R	ACA1_362130	complement(join(<32018..32243,32485..>32576))	Acanthamoeba castellanii str. Neff	14912271
ACA1_362140	mRNA	ACA1_362140	NW_004457269.1	35044	35721	D	ACA1_362140	<35044..>35721	Acanthamoeba castellanii str. Neff	14912272
ACA1_362250	mRNA	ACA1_362250	NW_004457269.1	36508	39278	D	ACA1_362250	join(<36508..36792,36862..36913,37133..37251,37349..39004,39078..>39278)	Acanthamoeba castellanii str. Neff	14912215
ACA1_362260	mRNA	ACA1_362260	NW_004457269.1	40328	41269	D	ACA1_362260	join(<40328..40894,40991..>41269)	Acanthamoeba castellanii str. Neff	14912216
ACA1_362270	mRNA	ACA1_362270	NW_004457269.1	41379	42983	R	ACA1_362270	complement(join(<41379..42152,42169..42803,42872..>42983))	Acanthamoeba castellanii str. Neff	14912305
ACA1_362280	mRNA	ACA1_362280	NW_004457269.1	43819	48072	D	ACA1_362280	join(<43819..44220,44280..44459,44540..45177,45309..45436,45530..45669,45799..46157,46275..46498,46639..46721,46818..46874,46980..47067,47177..>48072)	Acanthamoeba castellanii str. Neff	14912306
ACA1_362290	mRNA	ACA1_362290	NW_004457269.1	48134	49928	D	ACA1_362290	join(<48134..48205,48281..48402,48533..48617,48775..48862,48946..49129,49224..49273,49377..49447,49602..>49928)	Acanthamoeba castellanii str. Neff	14912236
ACA1_362300	mRNA	ACA1_362300	NW_004457269.1	50525	51214	D	ACA1_362300	<50525..>51214	Acanthamoeba castellanii str. Neff	14912222
ACA1_362430	mRNA	ACA1_362430	NW_004457269.1	61986	65918	D	ACA1_362430	join(<61986..62003,62140..62282,62347..62457,62568..62719,62808..62869,63068..63236,63338..63403,63482..63670,63745..63823,63918..64042,64144..64229,64297..64403,64533..64654,64720..64780,64876..64957,65033..65118,65186..65267,65356..65412,65543..65705,65833..>65918)	Acanthamoeba castellanii str. Neff	14912260
ACA1_362440	mRNA	ACA1_362440	NW_004457269.1	66041	70629	R	ACA1_362440	complement(join(<66041..66472,66543..66630,66701..66792,66869..67007,67086..67257,67393..67525,67722..67810,67963..68218,68414..68537,68635..68663,68750..68834,68911..69018,69141..69182,69254..69326,69563..69730,69847..69940,70032..70487,70564..>70629))	Acanthamoeba castellanii str. Neff	14912261
ACA1_362450	mRNA	ACA1_362450	NW_004457269.1	71690	73657	D	ACA1_362450	join(<71690..71864,72116..72285,72352..72696,72819..72932,72993..73172,73232..73252,73400..73454,73479..>73657)	Acanthamoeba castellanii str. Neff	14912256
ACA1_362460	mRNA	ACA1_362460	NW_004457269.1	74952	75264	D	ACA1_362460	join(<74952..75115,75180..>75264)	Acanthamoeba castellanii str. Neff	14912283
ACA1_362470	mRNA	ACA1_362470	NW_004457269.1	75409	76345	D	ACA1_362470	join(<75409..75597,75674..75778,75839..>76345)	Acanthamoeba castellanii str. Neff	14912243
ACA1_362480	mRNA	ACA1_362480	NW_004457269.1	77040	77402	D	ACA1_362480	<77040..>77402	Acanthamoeba castellanii str. Neff	14912262
ACA1_362490	mRNA	ACA1_362490	NW_004457269.1	77615	79681	R	ACA1_362490	complement(join(<77615..77776,77878..78002,78077..78162,78224..78317,78384..78557,78610..78755,78836..79160,79243..79291,79359..79418,79520..>79681))	Acanthamoeba castellanii str. Neff	14912263
ACA1_362500	mRNA	ACA1_362500	NW_004457269.1	79985	81001	R	ACA1_362500	complement(<79985..>81001)	Acanthamoeba castellanii str. Neff	14912250
ACA1_362510	mRNA	ACA1_362510	NW_004457269.1	81499	83031	R	ACA1_362510	complement(join(<81499..81516,81598..81680,81772..81868,81957..82090,82182..82265,82390..82504,82593..82693,82980..>83031))	Acanthamoeba castellanii str. Neff	14912203
ACA1_362520	mRNA	ACA1_362520	NW_004457269.1	83636	86155	R	ACA1_362520	complement(join(<83636..83714,83812..83913,83999..84112,84205..84353,84420..84582,84659..84810,84887..85034,85100..85349,85415..85520,85611..85692,85784..85877,85963..>86155))	Acanthamoeba castellanii str. Neff	14912204
ACA1_362530	mRNA	ACA1_362530	NW_004457269.1	86836	89004	R	ACA1_362530	complement(join(<86836..86954,87042..87094,87180..87709,87776..87923,87995..88386,88476..88557,88628..88721,88809..>89004))	Acanthamoeba castellanii str. Neff	14912212
ACA1_362540	mRNA	ACA1_362540	NW_004457269.1	89444	91565	R	ACA1_362540	complement(join(<89444..89637,89804..89870,89965..90156,90257..90449,90526..90729,90802..91040,91123..91323,91431..>91565))	Acanthamoeba castellanii str. Neff	14912254
ACA1_362550	mRNA	ACA1_362550	NW_004457269.1	92087	95050	D	ACA1_362550	join(<92087..92131,92233..92352,92417..92578,92654..92732,92810..93108,93201..93317,93404..93555,93945..94116,94217..94385,94657..94820,94946..>95050)	Acanthamoeba castellanii str. Neff	14912259
ACA1_362560	mRNA	ACA1_362560	NW_004457269.1	95917	99749	D	ACA1_362560	join(<95917..96027,96169..96308,96397..96929,97057..97193,97296..97984,98117..98235,98348..98617,98746..98937,99112..99232,99379..99573,99698..>99749)	Acanthamoeba castellanii str. Neff	14912217
ACA1_362570	mRNA	ACA1_362570	NW_004457269.1	100130	106111	R	ACA1_362570	complement(join(<100130..100237,100384..100650,100764..100962,101157..101325,101436..101619,101855..101905,102008..102167,102274..102359,102520..102639,102772..102936,103100..103267,103378..103517,103611..103620,103768..103914,103987..104117,104232..104364,104496..104599,104705..104915,105024..105153,105283..105368,105535..105618,105755..105856,106106..>106111))	Acanthamoeba castellanii str. Neff	14912225
ACA1_362580	mRNA	ACA1_362580	NW_004457269.1	106509	107092	R	ACA1_362580	complement(join(<106509..106610,106687..106933,107016..>107092))	Acanthamoeba castellanii str. Neff	14912265
ACA1_362590	mRNA	ACA1_362590	NW_004457269.1	107944	109164	R	ACA1_362590	complement(<107944..>109164)	Acanthamoeba castellanii str. Neff	14912205
ACA1_362600	mRNA	ACA1_362600	NW_004457269.1	109740	110629	D	ACA1_362600	join(<109740..109839,109906..110081,110142..110270,110315..>110629)	Acanthamoeba castellanii str. Neff	14912297
ACA1_362610	mRNA	ACA1_362610	NW_004457269.1	110746	114541	R	ACA1_362610	complement(join(<110746..110870,110989..111793,111918..111998,112142..112238,112357..112422,112520..112600,112680..112748,112813..112881,113003..113071,113250..113522,113599..113667,113747..113818,113918..114107,114310..114397,114521..>114541))	Acanthamoeba castellanii str. Neff	14912298
ACA1_362640	mRNA	ACA1_362640	NW_004457269.1	121476	122768	D	ACA1_362640	join(<121476..121647,121869..122020,122098..122228,122609..>122768)	Acanthamoeba castellanii str. Neff	14912245
ACA1_362650	mRNA	ACA1_362650	NW_004457269.1	122917	125619	D	ACA1_362650	join(<122917..122973,123094..123167,123291..123843,123956..124114,124225..124387,124468..124623,124751..124895,124977..>125619)	Acanthamoeba castellanii str. Neff	14912246
ACA1_362660	mRNA	ACA1_362660	NW_004457269.1	125704	134182	R	ACA1_362660	complement(join(<125704..125960,126062..126205,126335..126453,126558..126658,126766..126872,126967..127103,127223..127348,127435..127541,127682..127884,127996..128138,128231..128414,128600..128738,129095..129297,129468..129610,129708..129891,129975..130118,130243..130382,130489..130586,130682..131283,131350..131557,131661..132203,132288..132448,132550..132676,132779..132874,132957..133124,133216..133298,133422..133599,133679..133788,133888..>134182))	Acanthamoeba castellanii str. Neff	14912231
ACA1_362670	mRNA	ACA1_362670	NW_004457269.1	134503	136610	D	ACA1_362670	join(<134503..134866,134936..135081,135170..135269,135368..135442,135533..135657,135741..135809,135883..135957,136037..136146,136224..136317,136392..>136610)	Acanthamoeba castellanii str. Neff	14912284
ACA1_362690	mRNA	ACA1_362690	NW_004457269.1	143759	145923	D	ACA1_362690	join(<143759..143888,144076..144137,144232..144302,144407..144488,144645..144787,144929..145093,145164..145315,145406..>145923)	Acanthamoeba castellanii str. Neff	14912213
ACA1_362700	mRNA	ACA1_362700	NW_004457269.1	146142	156091	R	ACA1_362700	complement(join(<146142..146201,146335..146796,146823..147116,147176..147358,147441..147533,147637..147751,147852..147967,148083..148145,148254..148302,148378..148545,148644..148772,148858..149011,149108..149216,149307..149475,149551..149603,149697..149782,149900..150128,150240..150323,150460..150555,150652..150744,150849..150977,151051..151152,151262..151328,151342..151401,151505..151629,151745..151920,151995..152144,152226..152293,152393..152540,152645..152725,152763..152892,152977..153048,153122..153195,153274..153968,154107..154187,154270..154499,154554..154637,154730..154911,154981..155136,155208..155372,155476..155655,155777..155932,156016..>156091))	Acanthamoeba castellanii str. Neff	14912214
ACA1_362710	mRNA	ACA1_362710	NW_004457269.1	156789	157613	R	ACA1_362710	complement(join(<156789..156923,157014..157172,157250..157320,157457..>157613))	Acanthamoeba castellanii str. Neff	14912199
ACA1_362720	mRNA	ACA1_362720	NW_004457269.1	157937	160356	R	ACA1_362720	complement(join(<157937..158037,158122..158460,158524..158650,158692..158789,158889..158987,159109..159129,159197..159310,159371..159505,159627..159751,159842..159973,160095..160188,160266..>160356))	Acanthamoeba castellanii str. Neff	14912257
ACA1_362730	mRNA	ACA1_362730	NW_004457269.1	160610	161500	R	ACA1_362730	complement(join(<160610..160653,160758..160855,160960..161027,161134..161219,161300..161363,161435..>161500))	Acanthamoeba castellanii str. Neff	14912285
ACA1_362740	mRNA	ACA1_362740	NW_004457269.1	161765	165561	R	ACA1_362740	complement(join(<161765..161889,161982..162120,162224..162326,162408..162494,162574..162658,162734..162797,162874..162956,163050..163259,163327..163515,163595..163682,163778..164046,164175..164208,164275..164346,164402..164516,164576..164709,164812..165024,165122..165249,165303..>165561))	Acanthamoeba castellanii str. Neff	14912280
ACA1_362750	mRNA	ACA1_362750	NW_004457269.1	165804	169347	R	ACA1_362750	complement(join(<165804..166535,166690..166765,166842..166972,167048..167077,167325..167508,167587..167730,167816..167913,168017..168062,168073..168182,168292..168347,168512..168606,168698..>169347))	Acanthamoeba castellanii str. Neff	14912281
ACA1_362760	mRNA	ACA1_362760	NW_004457269.1	169370	170327	R	ACA1_362760	complement(join(<169370..169549,169650..169745,169815..169928,170001..>170327))	Acanthamoeba castellanii str. Neff	14912201
ACA1_362770	mRNA	ACA1_362770	NW_004457269.1	170485	175223	R	ACA1_362770	complement(join(<170485..170910,171003..171140,171203..171354,171432..171606,171693..171766,171891..171972,172097..172215,172285..172420,172505..172587,172664..172898,172969..173328,173410..173556,173650..173811,173898..173989,174105..174351,174455..174534,174710..>175223))	Acanthamoeba castellanii str. Neff	14912220
ACA1_362780	mRNA	ACA1_362780	NW_004457269.1	175572	178002	D	ACA1_362780	join(<175572..175596,175711..175776,175856..175906,176022..176229,176368..176686,176756..176998,177092..177242,177332..177402,177517..177625,177716..177825,177907..>178002)	Acanthamoeba castellanii str. Neff	14912221
ACA1_362790	mRNA	ACA1_362790	NW_004457269.1	178149	183563	R	ACA1_362790	complement(join(<178149..178471,178558..178857,178932..179315,179450..180363,180437..180493,180583..180875,180985..182483,182744..>183563))	Acanthamoeba castellanii str. Neff	14912255
ACA1_362800	mRNA	ACA1_362800	NW_004457269.1	185487	186759	D	ACA1_362800	join(<185487..186104,186271..>186759)	Acanthamoeba castellanii str. Neff	14912299
ACA1_362810	mRNA	ACA1_362810	NW_004457269.1	187012	188498	D	ACA1_362810	join(<187012..187451,187528..187628,187745..187891,188037..188096,188171..188288,188366..>188498)	Acanthamoeba castellanii str. Neff	14912258
ACA1_362820	mRNA	ACA1_362820	NW_004457269.1	188564	189708	D	ACA1_362820	join(<188564..188670,188770..188858,188982..189010,189095..189181,189278..189447,189558..>189708)	Acanthamoeba castellanii str. Neff	14912251
ACA1_362830	mRNA	ACA1_362830	NW_004457269.1	192644	193639	D	ACA1_362830	<192644..>193639	Acanthamoeba castellanii str. Neff	14912303
ACA1_362840	mRNA	ACA1_362840	NW_004457269.1	193928	194539	R	ACA1_362840	complement(<193928..>194539)	Acanthamoeba castellanii str. Neff	14912304
ACA1_362850	mRNA	ACA1_362850	NW_004457269.1	194959	195327	R	ACA1_362850	complement(join(<194959..195080,195120..>195327))	Acanthamoeba castellanii str. Neff	14912223
ACA1_362860	mRNA	ACA1_362860	NW_004457269.1	196257	198416	R	ACA1_362860	complement(join(<196257..196431,196523..196668,196680..196751,196812..196955,197023..197216,197302..197590,197671..197809,197888..198027,198109..198196,198295..>198416))	Acanthamoeba castellanii str. Neff	14912224
ACA1_362870	mRNA	ACA1_362870	NW_004457269.1	199298	199762	R	ACA1_362870	complement(<199298..>199762)	Acanthamoeba castellanii str. Neff	14912242
ACA1_362880	mRNA	ACA1_362880	NW_004457269.1	200185	201525	R	ACA1_362880	complement(join(<200185..200355,200377..>201525))	Acanthamoeba castellanii str. Neff	14912275
ACA1_362890	mRNA	ACA1_362890	NW_004457269.1	201562	202383	R	ACA1_362890	complement(join(<201562..201654,201742..>202383))	Acanthamoeba castellanii str. Neff	14912276
ACA1_362900	mRNA	ACA1_362900	NW_004457269.1	202442	203431	R	ACA1_362900	complement(join(<202442..202546,202688..202947,203005..>203431))	Acanthamoeba castellanii str. Neff	14912240
ACA1_362920	mRNA	ACA1_362920	NW_004457269.1	211073	212344	R	ACA1_362920	complement(join(<211073..211196,211252..211409,211498..211592,211723..211860,211966..212152,212231..>212344))	Acanthamoeba castellanii str. Neff	14912232
ACA1_362930	mRNA	ACA1_362930	NW_004457269.1	212991	214234	R	ACA1_362930	complement(join(<212991..213086,213141..213393,213420..>214234))	Acanthamoeba castellanii str. Neff	14912233
ACA1_362940	mRNA	ACA1_362940	NW_004457269.1	214643	215263	R	ACA1_362940	complement(join(<214643..215042,215055..>215263))	Acanthamoeba castellanii str. Neff	14912292
ACA1_362950	mRNA	ACA1_362950	NW_004457269.1	216171	216785	D	ACA1_362950	join(<216171..216174,216244..>216785)	Acanthamoeba castellanii str. Neff	14912293
ACA1_362960	mRNA	ACA1_362960	NW_004457269.1	217700	219130	R	ACA1_362960	complement(<217700..>219130)	Acanthamoeba castellanii str. Neff	14912229
ACA1_362970	mRNA	ACA1_362970	NW_004457269.1	219847	220559	D	ACA1_362970	join(<219847..220166,220187..>220559)	Acanthamoeba castellanii str. Neff	14912230
ACA1_363080	mRNA	ACA1_363080	NW_004457269.1	221509	223947	R	ACA1_363080	complement(join(<221509..222041,222111..222210,222227..222397,222430..223202,223227..223310,223423..223659,223753..>223947))	Acanthamoeba castellanii str. Neff	14912269
ACA1_363090	mRNA	ACA1_363090	NW_004457269.1	225052	226539	D	ACA1_363090	<225052..>226539	Acanthamoeba castellanii str. Neff	14912270
ACA1_363100	mRNA	ACA1_363100	NW_004457269.1	228116	228754	D	ACA1_363100	join(<228116..228447,228520..>228754)	Acanthamoeba castellanii str. Neff	14912252
ACA1_363110	mRNA	ACA1_363110	NW_004457269.1	229474	230568	D	ACA1_363110	<229474..>230568	Acanthamoeba castellanii str. Neff	14912253
ACA1_363120	mRNA	ACA1_363120	NW_004457269.1	230716	232392	R	ACA1_363120	complement(<230716..>232392)	Acanthamoeba castellanii str. Neff	14912300
ACA1_363130	mRNA	ACA1_363130	NW_004457269.1	233678	234436	D	ACA1_363130	<233678..>234436	Acanthamoeba castellanii str. Neff	14912301
ACA1_363140	mRNA	ACA1_363140	NW_004457269.1	236561	236780	D	ACA1_363140	join(<236561..236603,236629..>236780)	Acanthamoeba castellanii str. Neff	14912277
ACA1_363150	mRNA	ACA1_363150	NW_004457269.1	236958	237224	R	ACA1_363150	complement(join(<236958..237056,237183..>237224))	Acanthamoeba castellanii str. Neff	14912278
ACA1_363170	mRNA	ACA1_363170	NW_004457269.1	238138	238380	D	ACA1_363170	<238138..>238380	Acanthamoeba castellanii str. Neff	14912267
ACA1_363180	mRNA	ACA1_363180	NW_004457269.1	240250	241333	D	ACA1_363180	join(<240250..240484,240519..>241333)	Acanthamoeba castellanii str. Neff	14912268
ACA1_363190	mRNA	ACA1_363190	NW_004457269.1	241405	241860	R	ACA1_363190	complement(<241405..>241860)	Acanthamoeba castellanii str. Neff	14912206
ACA1_363200	mRNA	ACA1_363200	NW_004457269.1	242082	243185	R	ACA1_363200	complement(<242082..>243185)	Acanthamoeba castellanii str. Neff	14912207
ACA1_363210	mRNA	ACA1_363210	NW_004457269.1	243491	244624	D	ACA1_363210	<243491..>244624	Acanthamoeba castellanii str. Neff	14912208
ACA1_363220	mRNA	ACA1_363220	NW_004457269.1	244865	246559	D	ACA1_363220	join(<244865..245578,245708..>246559)	Acanthamoeba castellanii str. Neff	14912288
ACA1_363230	mRNA	ACA1_363230	NW_004457269.1	246740	247294	R	ACA1_363230	complement(<246740..>247294)	Acanthamoeba castellanii str. Neff	14912289
ACA1_363240	mRNA	ACA1_363240	NW_004457269.1	247689	248714	D	ACA1_363240	<247689..>248714	Acanthamoeba castellanii str. Neff	14912286
ACA1_363250	mRNA	ACA1_363250	NW_004457269.1	249680	250275	D	ACA1_363250	join(<249680..249955,249988..>250275)	Acanthamoeba castellanii str. Neff	14912287
ACA1_363260	mRNA	ACA1_363260	NW_004457269.1	250603	251571	D	ACA1_363260	<250603..>251571	Acanthamoeba castellanii str. Neff	14912226
ACA1_363270	mRNA	ACA1_363270	NW_004457269.1	252259	253146	D	ACA1_363270	<252259..>253146	Acanthamoeba castellanii str. Neff	14912227
ACA1_363290	mRNA	ACA1_363290	NW_004457269.1	253741	255418	D	ACA1_363290	join(<253741..254223,254576..>255418)	Acanthamoeba castellanii str. Neff	14912209
ACA1_363300	mRNA	ACA1_363300	NW_004457269.1	255659	256477	D	ACA1_363300	join(<255659..255793,255869..>256477)	Acanthamoeba castellanii str. Neff	14912210
ACA1_363310	mRNA	ACA1_363310	NW_004457269.1	256568	257646	R	ACA1_363310	complement(join(<256568..257486,257498..>257646))	Acanthamoeba castellanii str. Neff	14912211
ACA1_363320	mRNA	ACA1_363320	NW_004457269.1	259790	260665	D	ACA1_363320	<259790..>260665	Acanthamoeba castellanii str. Neff	14912294
ACA1_363330	mRNA	ACA1_363330	NW_004457269.1	260870	261488	D	ACA1_363330	join(<260870..261292,261306..>261488)	Acanthamoeba castellanii str. Neff	14912295
ACA1_363340	mRNA	ACA1_363340	NW_004457269.1	262799	264074	R	ACA1_363340	complement(join(<262799..263419,263487..>264074))	Acanthamoeba castellanii str. Neff	14912237
ACA1_363350	mRNA	ACA1_363350	NW_004457269.1	266938	267289	D	ACA1_363350	join(<266938..266989,267009..>267289)	Acanthamoeba castellanii str. Neff	14912238
ACA1_363360	mRNA	ACA1_363360	NW_004457269.1	269448	270038	D	ACA1_363360	<269448..>270038	Acanthamoeba castellanii str. Neff	14912218
ACA1_363370	mRNA	ACA1_363370	NW_004457269.1	270643	271506	D	ACA1_363370	join(<270643..270709,270756..270826,270862..>271506)	Acanthamoeba castellanii str. Neff	14912219
ACA1_363380	mRNA	ACA1_363380	NW_004457269.1	271869	272336	R	ACA1_363380	complement(<271869..>272336)	Acanthamoeba castellanii str. Neff	14912290
ACA1_363390	mRNA	ACA1_363390	NW_004457269.1	272618	273561	R	ACA1_363390	complement(join(<272618..273220,273316..>273561))	Acanthamoeba castellanii str. Neff	14912291
ACA1_363400	mRNA	ACA1_363400	NW_004457269.1	274412	274702	R	ACA1_363400	complement(<274412..>274702)	Acanthamoeba castellanii str. Neff	14912247
ACA1_363410	mRNA	ACA1_363410	NW_004457269.1	277152	278794	R	ACA1_363410	complement(join(<277152..277276,277342..277539,277613..277730,277816..278151,278219..278477,278578..278738,278771..>278794))	Acanthamoeba castellanii str. Neff	14912248
ACA1_363420	mRNA	ACA1_363420	NW_004457269.1	278962	279377	R	ACA1_363420	complement(join(<278962..279058,279076..>279377))	Acanthamoeba castellanii str. Neff	14912249
ACA1_363430	mRNA	ACA1_363430	NW_004457269.1	279888	282146	R	ACA1_363430	complement(join(<279888..280075,280119..280383,280450..280737,280794..281254,281398..281488,281642..281767,281798..281880,281939..>282146))	Acanthamoeba castellanii str. Neff	14912239
ACA1_256230	mRNA	ACA1_256230	NW_004457268.1	25	1833	D	ACA1_256230	join(<25..189,357..453,551..617,703..839,935..1121,1247..1394,1518..1684,1764..>1833)	Acanthamoeba castellanii str. Neff	14911968
ACA1_256240	mRNA	ACA1_256240	NW_004457268.1	2996	3585	D	ACA1_256240	join(<2996..3229,3303..3407,3478..>3585)	Acanthamoeba castellanii str. Neff	14912091
ACA1_256250	mRNA	ACA1_256250	NW_004457268.1	3716	4201	D	ACA1_256250	join(<3716..3762,3871..>4201)	Acanthamoeba castellanii str. Neff	14912090
ACA1_256360	mRNA	ACA1_256360	NW_004457268.1	6373	7198	D	ACA1_256360	join(<6373..6882,6953..>7198)	Acanthamoeba castellanii str. Neff	14912138
ACA1_256380	mRNA	ACA1_256380	NW_004457268.1	13551	16061	R	ACA1_256380	complement(join(<13551..13976,14110..14441,14550..14660,14746..14878,14951..15071,15165..15439,15508..15639,15727..15772,15877..>16061))	Acanthamoeba castellanii str. Neff	14912116
ACA1_256390	mRNA	ACA1_256390	NW_004457268.1	17199	25107	D	ACA1_256390	join(<17199..17238,17375..17488,17669..17780,17902..17966,18046..18116,18225..18326,18415..18506,18583..18719,18800..18907,18981..19220,19316..19439,19531..19651,19751..20158,20226..20385,20462..20580,20664..20774,20872..21120,21182..21287,21358..21473,21560..21686,21755..22057,22157..22318,22429..22577,22661..22727,22805..22888,22968..23243,23328..23528,23676..23779,23843..24059,24139..24263,24382..24720,24808..>25107)	Acanthamoeba castellanii str. Neff	14911956
ACA1_256400	mRNA	ACA1_256400	NW_004457268.1	25326	26146	R	ACA1_256400	complement(join(<25326..25765,25873..>26146))	Acanthamoeba castellanii str. Neff	14912123
ACA1_256410	mRNA	ACA1_256410	NW_004457268.1	26382	29295	D	ACA1_256410	join(<26382..26682,26747..27157,27243..27394,27465..27902,27967..28235,28316..28465,28537..28879,28945..29048,29133..>29295)	Acanthamoeba castellanii str. Neff	14912124
ACA1_256420	mRNA	ACA1_256420	NW_004457268.1	29555	30827	D	ACA1_256420	join(<29555..29638,29778..29852,29996..30133,30473..30677,30766..>30827)	Acanthamoeba castellanii str. Neff	14912170
ACA1_256430	mRNA	ACA1_256430	NW_004457268.1	31207	31571	R	ACA1_256430	complement(join(<31207..31404,31488..>31571))	Acanthamoeba castellanii str. Neff	14912150
ACA1_256440	mRNA	ACA1_256440	NW_004457268.1	31875	32628	D	ACA1_256440	join(<31875..31994,32109..32288,32354..32448,32598..>32628)	Acanthamoeba castellanii str. Neff	14912151
ACA1_256450	mRNA	ACA1_256450	NW_004457268.1	33005	36515	D	ACA1_256450	join(<33005..33015,33036..33137,33226..33309,33391..33770,33863..34029,34113..34236,34298..34384,34479..34813,34900..35016,35085..35185,35277..35350,35427..35479,35583..35810,35877..35972,36055..36279,36375..>36515)	Acanthamoeba castellanii str. Neff	14912166
ACA1_256460	mRNA	ACA1_256460	NW_004457268.1	36617	38904	D	ACA1_256460	join(<36617..36856,36884..37010,37074..37143,37207..37310,37398..37612,37696..>38904)	Acanthamoeba castellanii str. Neff	14912066
ACA1_256470	mRNA	ACA1_256470	NW_004457268.1	39579	40022	R	ACA1_256470	complement(join(<39579..39587,39661..39731,39863..39909,39970..>40022))	Acanthamoeba castellanii str. Neff	14912067
ACA1_256480	mRNA	ACA1_256480	NW_004457268.1	40614	42315	R	ACA1_256480	complement(join(<40614..40745,40794..41041,41196..41292,41431..41538,41645..41790,41894..42151,42231..>42315))	Acanthamoeba castellanii str. Neff	14912158
ACA1_256490	mRNA	ACA1_256490	NW_004457268.1	42481	43271	D	ACA1_256490	join(<42481..42616,42821..43049,43115..>43271)	Acanthamoeba castellanii str. Neff	14912127
ACA1_256500	mRNA	ACA1_256500	NW_004457268.1	43467	46238	R	ACA1_256500	complement(<43467..>46238)	Acanthamoeba castellanii str. Neff	14911997
ACA1_256510	mRNA	ACA1_256510	NW_004457268.1	46900	47323	R	ACA1_256510	complement(join(<46900..46970,47128..>47323))	Acanthamoeba castellanii str. Neff	14912028
ACA1_256520	mRNA	ACA1_256520	NW_004457268.1	47858	48940	R	ACA1_256520	complement(<47858..>48940)	Acanthamoeba castellanii str. Neff	14912109
ACA1_256530	mRNA	ACA1_256530	NW_004457268.1	49241	51224	R	ACA1_256530	complement(join(<49241..49472,49616..49714,49829..49904,49987..50071,50147..50299,50398..50474,50544..50636,50756..>51224))	Acanthamoeba castellanii str. Neff	14912110
ACA1_256540	mRNA	ACA1_256540	NW_004457268.1	51603	55829	D	ACA1_256540	join(<51603..51878,51999..52244,52302..52416,52542..53005,53118..53207,53305..53424,53586..53865,53960..54043,54124..54265,54364..54452,54537..54619,54750..>55829)	Acanthamoeba castellanii str. Neff	14912040
ACA1_256550	mRNA	ACA1_256550	NW_004457268.1	56050	56472	R	ACA1_256550	complement(<56050..>56472)	Acanthamoeba castellanii str. Neff	14912041
ACA1_256560	mRNA	ACA1_256560	NW_004457268.1	57104	57472	D	ACA1_256560	<57104..>57472	Acanthamoeba castellanii str. Neff	14912115
ACA1_256570	mRNA	ACA1_256570	NW_004457268.1	57886	58438	D	ACA1_256570	join(<57886..58140,58358..>58438)	Acanthamoeba castellanii str. Neff	14912187
ACA1_256580	mRNA	ACA1_256580	NW_004457268.1	58628	58996	R	ACA1_256580	complement(<58628..>58996)	Acanthamoeba castellanii str. Neff	14912152
ACA1_256590	mRNA	ACA1_256590	NW_004457268.1	59398	59885	D	ACA1_256590	join(<59398..59436,59664..>59885)	Acanthamoeba castellanii str. Neff	14912153
ACA1_256600	mRNA	ACA1_256600	NW_004457268.1	60019	61296	R	ACA1_256600	complement(join(<60019..60645,60671..60823,60844..>61296))	Acanthamoeba castellanii str. Neff	14912162
ACA1_256610	mRNA	ACA1_256610	NW_004457268.1	61650	65177	R	ACA1_256610	complement(join(<61650..61870,61962..62483,62580..62897,62990..63175,63300..63449,63525..63695,63770..63847,63923..64009,64093..64179,64259..64450,64535..64624,64696..64796,64884..64976,65155..>65177))	Acanthamoeba castellanii str. Neff	14912163
ACA1_256620	mRNA	ACA1_256620	NW_004457268.1	65588	67741	R	ACA1_256620	complement(join(<65588..65637,65662..65953,66091..66202,66296..66501,66581..66741,66823..67038,67178..67313,67344..67468,67564..>67741))	Acanthamoeba castellanii str. Neff	14912121
ACA1_256630	mRNA	ACA1_256630	NW_004457268.1	68076	70348	D	ACA1_256630	join(<68076..68237,68391..68480,68556..68629,68810..68885,68965..69028,69295..69448,69521..69647,69746..69922,69976..70060,70137..>70348)	Acanthamoeba castellanii str. Neff	14912122
ACA1_256640	mRNA	ACA1_256640	NW_004457268.1	70439	72070	D	ACA1_256640	join(<70439..70676,70762..70941,71121..71314,71387..71503,71570..71771,71847..>72070)	Acanthamoeba castellanii str. Neff	14912098
ACA1_256650	mRNA	ACA1_256650	NW_004457268.1	72263	77311	D	ACA1_256650	join(<72263..72278,72359..72423,72529..72619,72700..72815,72941..73096,73258..73357,73436..73563,73972..74071,74150..74309,74458..74736,74881..75017,75114..75244,75391..75607,75712..75832,75946..76148,76279..76362,76461..>77311)	Acanthamoeba castellanii str. Neff	14912144
ACA1_256760	mRNA	ACA1_256760	NW_004457268.1	78327	81642	R	ACA1_256760	complement(join(<78327..78764,78781..78793,78816..80745,80837..81029,81103..>81642))	Acanthamoeba castellanii str. Neff	14911939
ACA1_256770	mRNA	ACA1_256770	NW_004457268.1	82803	83198	R	ACA1_256770	complement(<82803..>83198)	Acanthamoeba castellanii str. Neff	14912197
ACA1_256780	mRNA	ACA1_256780	NW_004457268.1	83486	98632	R	ACA1_256780	complement(join(<83486..84124,84139..86091,86196..86522,86665..86786,86922..87017,87143..87300,87426..87559,87667..87847,87929..88100,88266..88399,88533..88712,88848..89017,89128..89277,89408..89548,89618..89694,89789..89942,90029..90158,90244..90343,90432..90627,90728..90893,91014..91118,91213..91349,91476..91629,91726..91824,91914..92032,92169..92279,92357..92465,92602..92723,92828..92968,93060..93134,93251..93481,93563..93641,93724..93863,93955..94019,94093..94248,94316..94433,94508..94855,94943..95095,95287..95565,95615..95812,95898..96101,96193..96318,96408..96515,96610..96727,96817..96978,97080..97207,97331..97639,97799..98044,98117..98277,98391..98458,98547..>98632))	Acanthamoeba castellanii str. Neff	14912120
ACA1_256790	mRNA	ACA1_256790	NW_004457268.1	99190	101907	R	ACA1_256790	complement(join(<99190..99384,99658..99783,99906..100038,100391..100550,100654..100776,100854..100923,101023..101171,101285..101351,101451..101525,101677..>101907))	Acanthamoeba castellanii str. Neff	14912011
ACA1_256800	mRNA	ACA1_256800	NW_004457268.1	102323	103520	R	ACA1_256800	complement(join(<102323..102441,102517..102547,102659..102760,102864..102958,103032..103178,103265..>103520))	Acanthamoeba castellanii str. Neff	14912009
ACA1_256910	mRNA	ACA1_256910	NW_004457268.1	104260	105079	R	ACA1_256910	complement(join(<104260..104487,104876..>105079))	Acanthamoeba castellanii str. Neff	14912010
ACA1_256920	mRNA	ACA1_256920	NW_004457268.1	105457	106485	R	ACA1_256920	complement(join(<105457..105575,105651..105742,105813..105829,105908..106150,106218..106319,106423..>106485))	Acanthamoeba castellanii str. Neff	14912029
ACA1_256930	mRNA	ACA1_256930	NW_004457268.1	107957	109342	R	ACA1_256930	complement(join(<107957..108227,108351..108364,108450..108544,108629..108745,108815..108884,108983..109047,109118..109218,109335..>109342))	Acanthamoeba castellanii str. Neff	14911986
ACA1_256940	mRNA	ACA1_256940	NW_004457268.1	109439	110401	R	ACA1_256940	complement(<109439..>110401)	Acanthamoeba castellanii str. Neff	14912048
ACA1_256950	mRNA	ACA1_256950	NW_004457268.1	110940	112634	R	ACA1_256950	complement(join(<110940..111072,111154..111320,111418..111500,111568..111662,111745..111813,111905..112029,112131..112268,112348..112449,112539..>112634))	Acanthamoeba castellanii str. Neff	14912049
ACA1_256960	mRNA	ACA1_256960	NW_004457268.1	112736	115468	R	ACA1_256960	complement(join(<112736..112954,113075..113178,113278..113399,113483..113636,113960..114096,114135..114330,114410..114502,114569..114647,114710..114771,114834..114886,114967..115176,115263..>115468))	Acanthamoeba castellanii str. Neff	14911995
ACA1_256970	mRNA	ACA1_256970	NW_004457268.1	115889	116878	R	ACA1_256970	complement(join(<115889..115905,115988..116095,116166..116273,116342..116546,116666..>116878))	Acanthamoeba castellanii str. Neff	14912021
ACA1_256980	mRNA	ACA1_256980	NW_004457268.1	117012	118900	R	ACA1_256980	complement(join(<117012..117232,117304..117426,117498..117858,118036..118083,118195..118267,118351..118390,118477..118509,118582..118680,118783..>118900))	Acanthamoeba castellanii str. Neff	14912022
ACA1_256990	mRNA	ACA1_256990	NW_004457268.1	118998	119879	R	ACA1_256990	complement(<118998..>119879)	Acanthamoeba castellanii str. Neff	14912026
ACA1_257000	mRNA	ACA1_257000	NW_004457268.1	120679	122218	D	ACA1_257000	join(<120679..120778,120899..121069,121147..121367,121442..121514,121597..121760,121864..121910,121979..122084,122138..>122218)	Acanthamoeba castellanii str. Neff	14912131
ACA1_257010	mRNA	ACA1_257010	NW_004457268.1	122747	126762	D	ACA1_257010	join(<122747..122884,123046..123161,123342..123368,123628..123730,123850..123994,124076..124151,124274..124368,124506..124557,124656..124739,124822..124942,125037..125085,125253..125399,125504..125612,125708..125785,125895..126035,126156..>126762)	Acanthamoeba castellanii str. Neff	14912045
ACA1_257020	mRNA	ACA1_257020	NW_004457268.1	126966	128324	R	ACA1_257020	complement(join(<126966..127300,127392..127710,127817..127985,128086..>128324))	Acanthamoeba castellanii str. Neff	14912139
ACA1_257030	mRNA	ACA1_257030	NW_004457268.1	129040	132608	D	ACA1_257030	join(<129040..129333,129511..129589,129696..129802,129908..130043,130193..130497,130628..130725,130830..130940,131025..131272,131387..131580,131716..131884,131981..132120,132224..132411,132500..>132608)	Acanthamoeba castellanii str. Neff	14912140
ACA1_257040	mRNA	ACA1_257040	NW_004457268.1	132708	133851	R	ACA1_257040	complement(join(<132708..132773,132881..133041,133132..133209,133309..133393,133504..133595,133794..>133851))	Acanthamoeba castellanii str. Neff	14912128
ACA1_257050	mRNA	ACA1_257050	NW_004457268.1	134011	136426	D	ACA1_257050	join(<134011..134319,134438..134560,134707..134866,134948..135137,135215..135316,135435..135496,135602..135642,135779..>136426)	Acanthamoeba castellanii str. Neff	14912004
ACA1_257170	mRNA	ACA1_257170	NW_004457268.1	138640	140604	D	ACA1_257170	join(<138640..138670,139262..139389,139549..139618,139713..139823,139982..140156,140249..140375,140528..>140604)	Acanthamoeba castellanii str. Neff	14912129
ACA1_257280	mRNA	ACA1_257280	NW_004457268.1	140985	144901	R	ACA1_257280	complement(join(<140985..141082,141203..141446,141544..141641,141838..142024,142136..142264,142385..142460,142548..142695,142829..142908,143008..143113,143229..143307,143390..143599,143693..143814,143940..144094,144303..>144901))	Acanthamoeba castellanii str. Neff	14911969
ACA1_257290	mRNA	ACA1_257290	NW_004457268.1	145874	146930	R	ACA1_257290	complement(join(<145874..145988,146052..146731,146880..>146930))	Acanthamoeba castellanii str. Neff	14912053
ACA1_257300	mRNA	ACA1_257300	NW_004457268.1	147361	148838	R	ACA1_257300	complement(join(<147361..147465,147565..147716,147796..147842,147984..148073,148160..148293,148396..148494,148758..>148838))	Acanthamoeba castellanii str. Neff	14912054
ACA1_257310	mRNA	ACA1_257310	NW_004457268.1	149238	150319	D	ACA1_257310	join(<149238..149249,149321..149419,149536..149672,149747..149815,149945..150143,150215..>150319)	Acanthamoeba castellanii str. Neff	14911965
ACA1_257320	mRNA	ACA1_257320	NW_004457268.1	150438	151300	R	ACA1_257320	complement(join(<150438..150623,150713..150784,150899..151024,151161..151253,151283..>151300))	Acanthamoeba castellanii str. Neff	14912088
ACA1_257430	mRNA	ACA1_257430	NW_004457268.1	151497	154158	R	ACA1_257430	complement(join(<151497..151601,151719..151870,151950..151996,152134..152223,152294..152427,152527..152625,153005..153043,153173..153349,153441..153512,153631..153756,153871..154030,154145..>154158))	Acanthamoeba castellanii str. Neff	14912125
ACA1_257540	mRNA	ACA1_257540	NW_004457268.1	154516	156144	D	ACA1_257540	join(<154516..154747,154985..155219,155436..155614,155720..155823,155929..>156144)	Acanthamoeba castellanii str. Neff	14912171
ACA1_257550	mRNA	ACA1_257550	NW_004457268.1	156630	157073	R	ACA1_257550	complement(join(<156630..156641,156738..156838,156920..>157073))	Acanthamoeba castellanii str. Neff	14912172
ACA1_257560	mRNA	ACA1_257560	NW_004457268.1	157426	157939	R	ACA1_257560	complement(join(<157426..157626,157712..>157939))	Acanthamoeba castellanii str. Neff	14911977
ACA1_257570	mRNA	ACA1_257570	NW_004457268.1	158185	160132	R	ACA1_257570	complement(join(<158185..159026,159248..159448,159553..159762,159866..160003,160126..>160132))	Acanthamoeba castellanii str. Neff	14912099
ACA1_257690	mRNA	ACA1_257690	NW_004457268.1	166293	166639	D	ACA1_257690	<166293..>166639	Acanthamoeba castellanii str. Neff	14912020
ACA1_257800	mRNA	ACA1_257800	NW_004457268.1	167479	168649	D	ACA1_257800	join(<167479..167658,167799..168169,168288..168396,168488..>168649)	Acanthamoeba castellanii str. Neff	14912149
ACA1_257910	mRNA	ACA1_257910	NW_004457268.1	174648	175064	R	ACA1_257910	complement(<174648..>175064)	Acanthamoeba castellanii str. Neff	14912001
ACA1_257920	mRNA	ACA1_257920	NW_004457268.1	175512	178285	D	ACA1_257920	join(<175512..175602,175923..176037,176152..176275,176381..176501,176593..176739,176836..176986,177103..177305,177454..177829,177926..178034,178124..>178285)	Acanthamoeba castellanii str. Neff	14912002
ACA1_257930	mRNA	ACA1_257930	NW_004457268.1	178420	179586	R	ACA1_257930	complement(join(<178420..178735,178851..179382,179580..>179586))	Acanthamoeba castellanii str. Neff	14912003
ACA1_257940	mRNA	ACA1_257940	NW_004457268.1	180007	181810	R	ACA1_257940	complement(join(<180007..180145,180237..180353,180472..180669,180740..180780,180857..180989,181051..181208,181292..181405,181673..>181810))	Acanthamoeba castellanii str. Neff	14912167
ACA1_257950	mRNA	ACA1_257950	NW_004457268.1	183356	186717	R	ACA1_257950	complement(join(<183356..185291,185395..185729,185813..185891,185981..186076,186409..186516,186605..>186717))	Acanthamoeba castellanii str. Neff	14912136
ACA1_257960	mRNA	ACA1_257960	NW_004457268.1	187011	188882	D	ACA1_257960	join(<187011..187204,187312..187558,187657..187749,187826..188035,188136..188329,188421..188566,188663..188756,188831..>188882)	Acanthamoeba castellanii str. Neff	14912057
ACA1_257970	mRNA	ACA1_257970	NW_004457268.1	189040	189718	R	ACA1_257970	complement(join(<189040..189117,189221..189414,189664..>189718))	Acanthamoeba castellanii str. Neff	14912132
ACA1_257980	mRNA	ACA1_257980	NW_004457268.1	190167	196428	D	ACA1_257980	join(<190167..190247,190361..190462,190563..190719,190796..190936,191039..191118,191244..191404,191520..191704,191811..191878,191980..192229,192322..192563,192628..192942,193033..193277,193352..193564,193669..193810,193930..193995,194008..194109,194255..194422,194613..194625,194639..194682,194778..194865,194987..195135,195203..195248,195341..195465,195540..195653,195726..195879,195988..196152,196250..>196428)	Acanthamoeba castellanii str. Neff	14912133
ACA1_257990	mRNA	ACA1_257990	NW_004457268.1	197010	198047	D	ACA1_257990	join(<197010..197060,197131..197185,197204..197272,197395..197466,197496..197669,197883..198006,198041..>198047)	Acanthamoeba castellanii str. Neff	14911961
ACA1_258000	mRNA	ACA1_258000	NW_004457268.1	199235	199762	D	ACA1_258000	join(<199235..199507,199598..>199762)	Acanthamoeba castellanii str. Neff	14911955
ACA1_258010	mRNA	ACA1_258010	NW_004457268.1	199885	201339	R	ACA1_258010	complement(join(<199885..200097,200206..200612,200735..200813,200887..>201339))	Acanthamoeba castellanii str. Neff	14912179
ACA1_258020	mRNA	ACA1_258020	NW_004457268.1	201332	202499	D	ACA1_258020	join(<201332..201421,201692..201936,201950..201962,202112..202323,202445..>202499)	Acanthamoeba castellanii str. Neff	14912027
ACA1_258230	mRNA	ACA1_258230	NW_004457268.1	202927	205911	R	ACA1_258230	complement(join(<202927..203429,203489..203614,203717..203822,203907..204008,204086..204231,204301..204493,204600..204721,204886..204973,205070..205219,205358..205482,205572..>205911))	Acanthamoeba castellanii str. Neff	14912180
ACA1_258240	mRNA	ACA1_258240	NW_004457268.1	206536	207056	D	ACA1_258240	join(<206536..206620,206710..206910,207040..>207056)	Acanthamoeba castellanii str. Neff	14912030
ACA1_258250	mRNA	ACA1_258250	NW_004457268.1	207645	210086	D	ACA1_258250	join(<207645..207729,207810..208010,208084..208187,208273..208375,208781..208944,209046..209209,209294..209516,209910..>210086)	Acanthamoeba castellanii str. Neff	14912147
ACA1_258260	mRNA	ACA1_258260	NW_004457268.1	210146	214880	R	ACA1_258260	complement(join(<210146..210475,210576..210731,210838..210938,211059..211199,211445..211555,211735..211836,211957..212057,212310..212488,212561..212630,212704..212810,212945..213150,213248..213767,213846..214566,214690..>214880))	Acanthamoeba castellanii str. Neff	14912148
ACA1_258270	mRNA	ACA1_258270	NW_004457268.1	215506	219719	D	ACA1_258270	join(<215506..215617,215741..216204,216302..216391,216535..216925,217048..217245,217312..217415,217479..217676,217811..217977,218090..218358,218475..218586,218680..218827,218938..219009,219105..219317,219438..219497,219531..>219719)	Acanthamoeba castellanii str. Neff	14912075
ACA1_258280	mRNA	ACA1_258280	NW_004457268.1	220363	221274	R	ACA1_258280	complement(join(<220363..220408,220487..220612,220745..220797,220890..220976,221116..>221274))	Acanthamoeba castellanii str. Neff	14912196
ACA1_258290	mRNA	ACA1_258290	NW_004457268.1	221641	222254	D	ACA1_258290	join(<221641..221649,221727..221792,221856..221884,221965..222068,222175..>222254)	Acanthamoeba castellanii str. Neff	14912014
ACA1_258300	mRNA	ACA1_258300	NW_004457268.1	222418	223309	R	ACA1_258300	complement(join(<222418..222433,222444..222477,222544..222682,222771..222844,222957..223112,223228..>223309))	Acanthamoeba castellanii str. Neff	14912039
ACA1_258310	mRNA	ACA1_258310	NW_004457268.1	223705	231858	D	ACA1_258310	join(<223705..224252,224347..224750,225017..225133,225216..225322,225465..225663,225778..225926,226024..226143,226240..226441,226545..227513,227623..227770,227883..228025,228138..228392,228492..228859,228976..229208,229369..230426,230589..230736,230836..231010,231100..231221,231345..231446,231516..231618,231742..>231858)	Acanthamoeba castellanii str. Neff	14912078
ACA1_258320	mRNA	ACA1_258320	NW_004457268.1	232738	234481	D	ACA1_258320	join(<232738..232954,233105..233186,233320..233440,233523..233660,233817..233984,234116..234273,234361..>234481)	Acanthamoeba castellanii str. Neff	14911960
ACA1_258330	mRNA	ACA1_258330	NW_004457268.1	235247	236455	D	ACA1_258330	join(<235247..235638,235989..236098,236175..>236455)	Acanthamoeba castellanii str. Neff	14912191
ACA1_258340	mRNA	ACA1_258340	NW_004457268.1	236698	240850	D	ACA1_258340	join(<236698..237015,237176..237373,237586..238110,238305..238470,238567..239241,239316..239397,239509..239648,239753..239845,239950..240011,240108..240168,240275..240344,240424..>240850)	Acanthamoeba castellanii str. Neff	14912189
ACA1_258450	mRNA	ACA1_258450	NW_004457268.1	241333	242703	D	ACA1_258450	join(<241333..241346,241482..241587,241707..241779,241875..242038,242139..242387,242506..>242703)	Acanthamoeba castellanii str. Neff	14912093
ACA1_258460	mRNA	ACA1_258460	NW_004457268.1	242883	245012	D	ACA1_258460	join(<242883..242958,243057..243291,243308..>245012)	Acanthamoeba castellanii str. Neff	14911966
ACA1_258470	mRNA	ACA1_258470	NW_004457268.1	245087	245943	D	ACA1_258470	join(<245087..245159,245231..245322,245397..245493,245606..245773,245861..>245943)	Acanthamoeba castellanii str. Neff	14911967
ACA1_258480	mRNA	ACA1_258480	NW_004457268.1	246023	252382	R	ACA1_258480	complement(join(<246023..246697,246786..246911,247012..247153,247293..247491,247564..247723,247889..247992,248095..248217,248382..248498,248699..248817,248910..249019,249122..249231,249368..249392,249534..249633,249751..249854,249925..250037,250126..250329,250432..250548,250651..250729,250808..250942,251048..251254,251339..251941,252272..>252382))	Acanthamoeba castellanii str. Neff	14911958
ACA1_258500	mRNA	ACA1_258500	NW_004457268.1	255647	258156	R	ACA1_258500	complement(join(<255647..255853,255925..256167,256297..256394,256472..256540,256555..256641,256742..256865,256883..256944,257075..257161,257280..257335,257443..257601,257686..257795,258028..>258156))	Acanthamoeba castellanii str. Neff	14912113
ACA1_258510	mRNA	ACA1_258510	NW_004457268.1	258341	259741	D	ACA1_258510	join(<258341..258355,258436..258600,258715..258811,258882..258928,259009..259125,259236..259358,259474..259695,259736..>259741)	Acanthamoeba castellanii str. Neff	14912114
ACA1_258520	mRNA	ACA1_258520	NW_004457268.1	259855	261297	R	ACA1_258520	complement(<259855..>261297)	Acanthamoeba castellanii str. Neff	14912186
ACA1_258530	mRNA	ACA1_258530	NW_004457268.1	261478	269485	R	ACA1_258530	complement(join(<261478..261795,261879..262103,262181..262337,262425..262554,262623..262722,262872..263019,263135..263346,263464..263562,263641..263817,263890..263941,264191..264355,264444..264673,264762..264885,264987..265081,265254..265422,265517..265656,265725..265809,265889..265951,266327..266432,266506..266601,266634..266903,266977..267073,267147..267339,267451..267594,267668..267837,267921..268077,268187..268334,268584..268895,268962..268981,268998..269220,269344..>269485))	Acanthamoeba castellanii str. Neff	14912178
ACA1_258540	mRNA	ACA1_258540	NW_004457268.1	269808	270699	D	ACA1_258540	join(<269808..269965,270000..270018,270160..>270699)	Acanthamoeba castellanii str. Neff	14912012
ACA1_258550	mRNA	ACA1_258550	NW_004457268.1	270771	273409	R	ACA1_258550	complement(join(<270771..271121,271179..271243,271313..271420,271534..271609,271700..271761,271867..271973,272047..272132,272247..272679,272789..272931,273059..273117,273193..273273,273352..>273409))	Acanthamoeba castellanii str. Neff	14912111
ACA1_258560	mRNA	ACA1_258560	NW_004457268.1	273526	274658	D	ACA1_258560	join(<273526..273687,273772..273813,273889..274003,274110..274209,274327..274511,274588..>274658)	Acanthamoeba castellanii str. Neff	14912112
ACA1_258570	mRNA	ACA1_258570	NW_004457268.1	274819	276034	R	ACA1_258570	complement(join(<274819..274913,275013..275229,275324..>276034))	Acanthamoeba castellanii str. Neff	14912074
ACA1_258580	mRNA	ACA1_258580	NW_004457268.1	276354	278642	D	ACA1_258580	join(<276354..276783,276933..277044,277151..277243,277408..277454,277628..277686,277812..277909,277985..>278642)	Acanthamoeba castellanii str. Neff	14912190
ACA1_258590	mRNA	ACA1_258590	NW_004457268.1	278701	279507	R	ACA1_258590	complement(join(<278701..279147,279210..279347,279412..>279507))	Acanthamoeba castellanii str. Neff	14912097
ACA1_258600	mRNA	ACA1_258600	NW_004457268.1	279663	280374	R	ACA1_258600	complement(join(<279663..279685,279754..279951,280020..280230,280321..>280374))	Acanthamoeba castellanii str. Neff	14912107
ACA1_258610	mRNA	ACA1_258610	NW_004457268.1	280596	282168	D	ACA1_258610	join(<280596..280803,280889..280967,281062..281231,281363..281479,281567..281653,281769..281857,281953..>282168)	Acanthamoeba castellanii str. Neff	14912108
ACA1_258620	mRNA	ACA1_258620	NW_004457268.1	282321	283970	R	ACA1_258620	complement(join(<282321..282407,282664..282852,282968..283072,283159..283360,283476..283587,283693..283731,283814..>283970))	Acanthamoeba castellanii str. Neff	14912089
ACA1_258630	mRNA	ACA1_258630	NW_004457268.1	284691	288631	R	ACA1_258630	complement(join(<284691..284792,284874..285023,285103..285183,285287..285361,285507..285596,285691..286106,286347..286431,286547..286603,286697..286827,286914..287120,287318..287364,287439..287648,287960..288114,288458..>288631))	Acanthamoeba castellanii str. Neff	14911992
ACA1_258640	mRNA	ACA1_258640	NW_004457268.1	288737	294285	D	ACA1_258640	join(<288737..288974,289163..289302,289366..289472,289558..289695,289798..289895,290092..290184,290372..290478,290595..290654,290743..290850,290960..291100,291209..291327,291409..291519,291626..291669,291754..291791,291893..292072,292167..292277,292387..292539,292830..293080,293417..293457,293557..293656,293727..294049,294164..>294285)	Acanthamoeba castellanii str. Neff	14911993
ACA1_258660	mRNA	ACA1_258660	NW_004457268.1	297645	298536	R	ACA1_258660	complement(join(<297645..297857,297934..298230,298303..>298536))	Acanthamoeba castellanii str. Neff	14912118
ACA1_258670	mRNA	ACA1_258670	NW_004457268.1	298879	307180	R	ACA1_258670	complement(join(<298879..299169,299264..299488,299596..299752,299901..300030,300152..300251,300337..300481,300574..300702,300783..300859,300948..300998,301121..301300,301576..301810,301923..302270,302367..302509,302666..302756,302842..302925,303031..303155,303291..303387,303529..303623,303762..303903,304016..304130,304396..304459,304546..304682,304797..304890,305006..305198,305308..305567,305700..305856,305931..306069,306153..306509,306576..306767,307030..>307180))	Acanthamoeba castellanii str. Neff	14912119
ACA1_258680	mRNA	ACA1_258680	NW_004457268.1	307384	307680	R	ACA1_258680	complement(join(<307384..307502,307614..>307680))	Acanthamoeba castellanii str. Neff	14912141
ACA1_258690	mRNA	ACA1_258690	NW_004457268.1	308153	309102	R	ACA1_258690	complement(join(<308153..308316,308424..308570,308711..308871,308936..>309102))	Acanthamoeba castellanii str. Neff	14912033
ACA1_258700	mRNA	ACA1_258700	NW_004457268.1	309330	310848	R	ACA1_258700	complement(join(<309330..309500,309584..309620,309741..309867,309965..310131,310251..310356,310482..310589,310728..>310848))	Acanthamoeba castellanii str. Neff	14912034
ACA1_258710	mRNA	ACA1_258710	NW_004457268.1	310970	313985	D	ACA1_258710	join(<310970..311114,311193..311341,311541..311730,311920..311999,312079..312139,312224..312299,312486..312629,312739..312866,313010..313167,313244..313373,313475..313518,313606..313674,313866..>313985)	Acanthamoeba castellanii str. Neff	14912016
ACA1_258720	mRNA	ACA1_258720	NW_004457268.1	314072	314483	D	ACA1_258720	join(<314072..314249,314350..>314483)	Acanthamoeba castellanii str. Neff	14912159
ACA1_258730	mRNA	ACA1_258730	NW_004457268.1	314577	321663	R	ACA1_258730	complement(join(<314577..314713,314797..314956,315050..315177,315305..315374,315403..315413,315470..315729,315824..315927,316052..316282,316346..316407,316537..316705,316806..316962,317018..317217,317381..317510,317584..317771,317929..318108,318197..318281,318399..318525,318643..318764,318937..319073,319222..319398,319536..319629,319765..319850,320068..320078,320131..320215,320357..320533,320666..320759,320901..321011,321096..321448,321541..>321663))	Acanthamoeba castellanii str. Neff	14912068
ACA1_258840	mRNA	ACA1_258840	NW_004457268.1	321734	324491	R	ACA1_258840	complement(join(<321734..321900,322008..322125,322239..322607,322671..322817,323000..323145,323281..323464,323524..323624,323725..323989,324092..324227,324358..>324491))	Acanthamoeba castellanii str. Neff	14912037
ACA1_258850	mRNA	ACA1_258850	NW_004457268.1	324834	328051	D	ACA1_258850	join(<324834..324966,325049..325200,325277..325357,325430..325646,325727..325876,325990..326093,326169..326366,326513..326679,326794..326943,328042..>328051)	Acanthamoeba castellanii str. Neff	14912143
ACA1_258960	mRNA	ACA1_258960	NW_004457268.1	327841	329510	R	ACA1_258960	complement(join(<327841..327868,328110..328238,328339..328526,328664..328774,329017..329116,329239..>329510))	Acanthamoeba castellanii str. Neff	14911938
ACA1_258970	mRNA	ACA1_258970	NW_004457268.1	329580	330961	R	ACA1_258970	complement(join(<329580..329665,329728..329786,329918..330005,330262..330326,330478..330568,330718..>330961))	Acanthamoeba castellanii str. Neff	14912061
ACA1_258980	mRNA	ACA1_258980	NW_004457268.1	331290	332456	D	ACA1_258980	join(<331290..331615,331730..331857,331961..332061,332148..>332456)	Acanthamoeba castellanii str. Neff	14912000
ACA1_258990	mRNA	ACA1_258990	NW_004457268.1	332917	333454	D	ACA1_258990	join(<332917..332932,333014..333126,333220..333283,333321..>333454)	Acanthamoeba castellanii str. Neff	14912086
ACA1_259000	mRNA	ACA1_259000	NW_004457268.1	333631	335548	D	ACA1_259000	join(<333631..333703,333804..333973,334125..334373,334482..334572,334684..334781,334975..335089,335228..335400,335498..>335548)	Acanthamoeba castellanii str. Neff	14912087
ACA1_259010	mRNA	ACA1_259010	NW_004457268.1	335724	337472	R	ACA1_259010	complement(join(<335724..336017,336030..336150,336288..336400,336537..336610,336718..336793,336960..337081,337205..>337472))	Acanthamoeba castellanii str. Neff	14912183
ACA1_259120	mRNA	ACA1_259120	NW_004457268.1	338215	339476	R	ACA1_259120	complement(join(<338215..338252,338388..338517,338834..338890,338918..338955,339158..>339476))	Acanthamoeba castellanii str. Neff	14911984
ACA1_259130	mRNA	ACA1_259130	NW_004457268.1	339634	340486	R	ACA1_259130	complement(join(<339634..339782,339901..340032,340128..340274,340384..>340486))	Acanthamoeba castellanii str. Neff	14911990
ACA1_259240	mRNA	ACA1_259240	NW_004457268.1	341454	341703	D	ACA1_259240	join(<341454..341641,341673..>341703)	Acanthamoeba castellanii str. Neff	14911941
ACA1_259360	mRNA	ACA1_259360	NW_004457268.1	345701	345973	D	ACA1_259360	<345701..>345973	Acanthamoeba castellanii str. Neff	14912192
ACA1_259470	mRNA	ACA1_259470	NW_004457268.1	346346	347861	R	ACA1_259470	complement(join(<346346..346581,346741..346957,347089..347259,347450..>347861))	Acanthamoeba castellanii str. Neff	14912193
ACA1_259480	mRNA	ACA1_259480	NW_004457268.1	348213	349577	R	ACA1_259480	complement(join(<348213..348383,348469..348497,348801..348887,349025..349054,349196..>349577))	Acanthamoeba castellanii str. Neff	14912194
ACA1_259490	mRNA	ACA1_259490	NW_004457268.1	349838	357113	D	ACA1_259490	join(<349838..350023,350094..350213,350355..350507,350647..350821,351006..351120,351240..351533,351632..351787,351848..351962,352030..352277,352421..352540,352667..353122,353210..353516,353584..353911,354004..354404,354630..354857,354933..355115,355316..355489,355686..355784,355898..356092,356183..356309,356420..356670,356802..>357113)	Acanthamoeba castellanii str. Neff	14912073
ACA1_259500	mRNA	ACA1_259500	NW_004457268.1	357302	357980	R	ACA1_259500	complement(join(<357302..357477,357592..357822,357914..>357980))	Acanthamoeba castellanii str. Neff	14912164
ACA1_259510	mRNA	ACA1_259510	NW_004457268.1	358169	359029	D	ACA1_259510	join(<358169..358268,358341..358446,358553..358877,358961..>359029)	Acanthamoeba castellanii str. Neff	14912188
ACA1_259520	mRNA	ACA1_259520	NW_004457268.1	359134	359632	D	ACA1_259520	join(<359134..359527,359607..>359632)	Acanthamoeba castellanii str. Neff	14911959
ACA1_259530	mRNA	ACA1_259530	NW_004457268.1	362374	363522	R	ACA1_259530	complement(join(<362374..362749,362805..362914,362998..363151,363289..363435,363485..>363522))	Acanthamoeba castellanii str. Neff	14912055
ACA1_259540	mRNA	ACA1_259540	NW_004457268.1	363834	373582	R	ACA1_259540	complement(join(<363834..364140,364301..364739,365029..365674,365792..365929,366066..366264,366403..366525,366598..366941,367031..367162,367251..367441,367554..367857,367995..368166,368283..368402,368500..368777,368954..369074,369185..369702,369812..369949,370089..370175,370317..370457,370626..370808,370955..371152,371299..371502,371635..371742,371785..373014,373183..373332,373526..>373582))	Acanthamoeba castellanii str. Neff	14912056
ACA1_259550	mRNA	ACA1_259550	NW_004457268.1	373804	387066	D	ACA1_259550	join(<373804..375154,375282..375506,375704..376079,376288..376474,376635..376829,376982..377050,377266..377478,377612..377850,377996..378167,378398..378985,379120..379170,379518..379695,379881..380028,380129..380300,380390..380511,380802..380903,380975..381077,381182..381265,381510..381549,381795..381870,381898..381942,382011..382279,382623..382777,382944..383159,383302..383393,383661..383856,384231..385119,385267..385340,385356..385517,385651..385705,386231..386478,386563..>387066)	Acanthamoeba castellanii str. Neff	14912094
ACA1_259960	mRNA	ACA1_259960	NW_004457268.1	387750	389458	D	ACA1_259960	join(<387750..387947,388177..388729,388914..>389458)	Acanthamoeba castellanii str. Neff	14911994
ACA1_259970	mRNA	ACA1_259970	NW_004457268.1	391981	392315	R	ACA1_259970	complement(join(<391981..392148,392217..>392315))	Acanthamoeba castellanii str. Neff	14912160
ACA1_259980	mRNA	ACA1_259980	NW_004457268.1	393406	398933	D	ACA1_259980	join(<393406..393534,393564..393609,393665..393849,393862..393948,394109..394246,394412..395205,395367..395379,395410..395497,395603..395634,395698..395805,396001..396084,396247..396648,396823..397032,397139..397261,397428..397499,397684..398145,398293..398355,398535..398714,398805..>398933)	Acanthamoeba castellanii str. Neff	14912161
ACA1_259990	mRNA	ACA1_259990	NW_004457268.1	399105	401810	R	ACA1_259990	complement(join(<399105..399403,399485..399655,399742..399826,399969..400068,400262..400385,400486..400549,400752..400813,400983..401045,401194..401310,401471..>401810))	Acanthamoeba castellanii str. Neff	14911957
ACA1_260000	mRNA	ACA1_260000	NW_004457268.1	402030	404186	D	ACA1_260000	join(<402030..402097,402216..402295,402424..402646,402752..402880,403023..403152,403283..403526,403640..403776,403894..404005,404119..>404186)	Acanthamoeba castellanii str. Neff	14911991
ACA1_260010	mRNA	ACA1_260010	NW_004457268.1	404374	404978	R	ACA1_260010	complement(join(<404374..404580,404685..404859,404947..>404978))	Acanthamoeba castellanii str. Neff	14912065
ACA1_260020	mRNA	ACA1_260020	NW_004457268.1	405393	407133	D	ACA1_260020	join(<405393..405729,405918..406207,406315..406539,406624..>407133)	Acanthamoeba castellanii str. Neff	14912165
ACA1_260030	mRNA	ACA1_260030	NW_004457268.1	407333	409722	R	ACA1_260030	complement(join(<407333..407422,407495..407665,407758..407960,408080..408171,408353..408423,408528..408668,408831..408962,409106..409243,409317..409357,409449..>409722))	Acanthamoeba castellanii str. Neff	14912145
ACA1_260040	mRNA	ACA1_260040	NW_004457268.1	409831	410399	D	ACA1_260040	join(<409831..409912,409979..410031,410117..410220,410330..>410399)	Acanthamoeba castellanii str. Neff	14912146
ACA1_260050	mRNA	ACA1_260050	NW_004457268.1	410605	413392	D	ACA1_260050	join(<410605..410744,410860..410988,411266..411501,411638..411876,411946..412181,412271..412505,412618..412863,413111..>413392)	Acanthamoeba castellanii str. Neff	14912155
ACA1_260060	mRNA	ACA1_260060	NW_004457268.1	413552	414777	D	ACA1_260060	join(<413552..413592,413690..413764,413849..413925,414057..414164,414273..414358,414458..414551,414653..>414777)	Acanthamoeba castellanii str. Neff	14912051
ACA1_260070	mRNA	ACA1_260070	NW_004457268.1	414949	418427	D	ACA1_260070	join(<414949..415477,415570..415640,415767..415820,415975..416094,416231..416366,416488..416673,416776..416864,416958..417068,417367..417441,417544..417660,417809..418044,418212..418299,418398..>418427)	Acanthamoeba castellanii str. Neff	14912181
ACA1_260080	mRNA	ACA1_260080	NW_004457268.1	418658	419781	R	ACA1_260080	complement(join(<418658..418858,418978..419129,419214..419333,419406..>419781))	Acanthamoeba castellanii str. Neff	14912182
ACA1_260090	mRNA	ACA1_260090	NW_004457268.1	420294	422952	D	ACA1_260090	join(<420294..420566,420672..420776,420940..421072,421178..421264,421407..421508,421607..421772,421876..422060,422167..422240,422312..422459,422546..422739,422836..>422952)	Acanthamoeba castellanii str. Neff	14912069
ACA1_260100	mRNA	ACA1_260100	NW_004457268.1	423331	432836	R	ACA1_260100	complement(join(<423331..423402,423477..423873,423990..424126,424222..424379,424489..428101,428231..428599,428737..429421,429524..430221,430314..430640,430764..431201,431303..431431,431533..431823,431952..431999,432140..432241,432462..432620,432744..>432836))	Acanthamoeba castellanii str. Neff	14912070
ACA1_260110	mRNA	ACA1_260110	NW_004457268.1	433297	434964	R	ACA1_260110	complement(join(<433297..434379,434515..>434964))	Acanthamoeba castellanii str. Neff	14912100
ACA1_260120	mRNA	ACA1_260120	NW_004457268.1	436024	436846	D	ACA1_260120	join(<436024..436730,436744..>436846)	Acanthamoeba castellanii str. Neff	14912096
ACA1_260130	mRNA	ACA1_260130	NW_004457268.1	437142	439014	D	ACA1_260130	join(<437142..437702,437881..437987,438080..438198,438333..438468,438585..>439014)	Acanthamoeba castellanii str. Neff	14911998
ACA1_260140	mRNA	ACA1_260140	NW_004457268.1	439315	442365	D	ACA1_260140	join(<439315..439446,439519..439770,439872..440033,440126..440206,440304..440510,440618..440794,440880..441066,441177..441268,441389..441430,441577..441711,441830..441968,442058..>442365)	Acanthamoeba castellanii str. Neff	14912184
ACA1_260150	mRNA	ACA1_260150	NW_004457268.1	442464	445616	R	ACA1_260150	complement(join(<442464..442865,442877..443727,443852..443995,444068..444113,444257..444415,444506..444723,444913..445051,445199..445372,445506..>445616))	Acanthamoeba castellanii str. Neff	14912185
ACA1_260160	mRNA	ACA1_260160	NW_004457268.1	446227	449359	D	ACA1_260160	join(<446227..446890,447096..447805,447900..448057,448182..448275,448390..448476,448573..448707,448832..448967,449091..>449359)	Acanthamoeba castellanii str. Neff	14912052
ACA1_260170	mRNA	ACA1_260170	NW_004457268.1	449672	451042	D	ACA1_260170	join(<449672..450007,450138..450306,450417..450509,450604..450845,450965..>451042)	Acanthamoeba castellanii str. Neff	14912079
ACA1_260180	mRNA	ACA1_260180	NW_004457268.1	452158	453396	D	ACA1_260180	join(<452158..452321,452425..452536,452631..452727,452792..453080,453183..>453396)	Acanthamoeba castellanii str. Neff	14912095
ACA1_260190	mRNA	ACA1_260190	NW_004457268.1	453683	454577	R	ACA1_260190	complement(join(<453683..453824,453907..454176,454251..454368,454466..>454577))	Acanthamoeba castellanii str. Neff	14912006
ACA1_260200	mRNA	ACA1_260200	NW_004457268.1	455300	456206	R	ACA1_260200	complement(join(<455300..455434,455513..455569,455648..455731,455837..455951,455963..456021,456093..>456206))	Acanthamoeba castellanii str. Neff	14912007
ACA1_260210	mRNA	ACA1_260210	NW_004457268.1	456979	458433	D	ACA1_260210	join(<456979..456984,456996..457132,457237..457414,457588..457669,457757..457926,458032..458142,458221..>458433)	Acanthamoeba castellanii str. Neff	14912062
ACA1_260220	mRNA	ACA1_260220	NW_004457268.1	458790	460332	D	ACA1_260220	join(<458790..458873,459015..459096,459225..459338,459469..459578,459647..459774,459872..460002,460061..>460332)	Acanthamoeba castellanii str. Neff	14912008
ACA1_260230	mRNA	ACA1_260230	NW_004457268.1	460437	461398	D	ACA1_260230	join(<460437..460625,460847..460933,461038..461122,461185..461281,461359..>461398)	Acanthamoeba castellanii str. Neff	14912102
ACA1_260240	mRNA	ACA1_260240	NW_004457268.1	461729	463625	D	ACA1_260240	join(<461729..461777,461881..461940,462005..462105,462220..462303,462446..462489,462563..462702,462786..462825,463123..463219,463312..463437,463548..>463625)	Acanthamoeba castellanii str. Neff	14912071
ACA1_260250	mRNA	ACA1_260250	NW_004457268.1	463892	465782	D	ACA1_260250	join(<463892..464320,464449..464552,464718..465299,465473..>465782)	Acanthamoeba castellanii str. Neff	14912072
ACA1_260260	mRNA	ACA1_260260	NW_004457268.1	467114	468925	R	ACA1_260260	complement(join(<467114..467752,467770..467927,467986..468250,468332..468673,468716..>468925))	Acanthamoeba castellanii str. Neff	14912080
ACA1_260270	mRNA	ACA1_260270	NW_004457268.1	469155	470398	D	ACA1_260270	join(<469155..469224,469319..469413,469480..469561,469649..469798,469953..470131,470246..>470398)	Acanthamoeba castellanii str. Neff	14911983
ACA1_260280	mRNA	ACA1_260280	NW_004457268.1	470575	473114	R	ACA1_260280	complement(join(<470575..470690,470787..470877,470942..471124,471140..471582,471766..472623,472724..>473114))	Acanthamoeba castellanii str. Neff	14912081
ACA1_260290	mRNA	ACA1_260290	NW_004457268.1	473552	479820	R	ACA1_260290	complement(join(<473552..476486,476681..476836,476866..477459,477501..479175,479244..>479820))	Acanthamoeba castellanii str. Neff	14912082
ACA1_260300	mRNA	ACA1_260300	NW_004457268.1	480176	484868	R	ACA1_260300	complement(join(<480176..480181,480192..480335,480460..480646,480775..480932,481106..481206,481364..481480,481576..481644,481739..481792,481935..482051,482169..482241,482345..482569,483299..483435,483531..483599,483708..483761,483906..484022,484151..484223,484553..484690,484794..>484868))	Acanthamoeba castellanii str. Neff	14911985
ACA1_260510	mRNA	ACA1_260510	NW_004457268.1	485316	488008	R	ACA1_260510	complement(join(<485316..485530,485631..485777,485846..485993,486041..486522,486597..486705,486832..487020,487096..487182,487271..487358,487444..487525,487635..487866,487955..>488008))	Acanthamoeba castellanii str. Neff	14912137
ACA1_260520	mRNA	ACA1_260520	NW_004457268.1	488329	493096	R	ACA1_260520	complement(join(<488329..488437,488545..488641,488716..488931,489013..489115,489258..489401,489494..489604,489691..489817,489911..490103,490250..490367,490550..490611,490698..490787,490874..490961,491060..491197,491301..491387,491468..491555,491654..491835,491935..492027,492137..492333,492444..492547,492696..492955,493088..>493096))	Acanthamoeba castellanii str. Neff	14912038
ACA1_260530	mRNA	ACA1_260530	NW_004457268.1	493398	495315	R	ACA1_260530	complement(join(<493398..493652,493764..493779,493855..494330,494413..494606,494766..494808,494906..494984,495064..495128,495268..>495315))	Acanthamoeba castellanii str. Neff	14912050
ACA1_260540	mRNA	ACA1_260540	NW_004457268.1	495487	497416	D	ACA1_260540	join(<495487..495567,495880..495947,496045..496278,496352..496427,496494..496550,496672..496802,496876..496973,497091..497235,497335..>497416)	Acanthamoeba castellanii str. Neff	14912156
ACA1_260760	mRNA	ACA1_260760	NW_004457268.1	509586	514418	D	ACA1_260760	join(<509586..509823,509918..510021,510100..510159,510247..510471,510546..510618,510751..510867,511006..511059,511153..511221,511317..511433,511581..511681,511824..511981,512126..512312,512455..512598,512731..514253,514319..>514418)	Acanthamoeba castellanii str. Neff	14912126
ACA1_260770	mRNA	ACA1_260770	NW_004457268.1	515417	518255	R	ACA1_260770	complement(join(<515417..515500,515570..515793,515886..516194,516267..516353,516436..516774,516875..517117,517227..517320,517393..517683,517845..>518255))	Acanthamoeba castellanii str. Neff	14912047
ACA1_260780	mRNA	ACA1_260780	NW_004457268.1	518649	524903	D	ACA1_260780	join(<518649..519069,519172..519313,519427..519538,519651..519776,519879..519998,520079..520173,520266..520402,520526..520593,520708..520834,520917..521026,521104..521332,521414..521619,521713..521934,522001..522090,522151..522243,522337..522504,522576..522957,523047..523122,523223..523395,523496..523565,523663..523991,524080..524238,524412..524553,524633..>524903)	Acanthamoeba castellanii str. Neff	14911947
ACA1_260790	mRNA	ACA1_260790	NW_004457268.1	524979	525958	R	ACA1_260790	complement(join(<524979..525684,525748..525850,525949..>525958))	Acanthamoeba castellanii str. Neff	14911979
ACA1_260800	mRNA	ACA1_260800	NW_004457268.1	526606	527712	D	ACA1_260800	join(<526606..526624,526734..526813,526852..>527712)	Acanthamoeba castellanii str. Neff	14911949
ACA1_260810	mRNA	ACA1_260810	NW_004457268.1	527843	530875	R	ACA1_260810	complement(join(<527843..528176,528235..528505,528596..528735,528840..529088,529169..529502,529583..529704,529822..529997,530210..530339,530435..530534,530651..530732,530804..>530875))	Acanthamoeba castellanii str. Neff	14911950
ACA1_260830	mRNA	ACA1_260830	NW_004457268.1	534369	534863	D	ACA1_260830	join(<534369..534492,534562..534650,534726..>534863)	Acanthamoeba castellanii str. Neff	14912175
ACA1_260850	mRNA	ACA1_260850	NW_004457268.1	536520	538094	D	ACA1_260850	<536520..>538094	Acanthamoeba castellanii str. Neff	14911945
ACA1_260860	mRNA	ACA1_260860	NW_004457268.1	538687	542468	D	ACA1_260860	join(<538687..538768,538851..538905,538979..539082,539261..539316,539479..539609,539692..539944,540017..540100,540383..540463,540557..541291,541384..541642,541777..541903,541978..542077,542154..542288,542391..>542468)	Acanthamoeba castellanii str. Neff	14911946
ACA1_260870	mRNA	ACA1_260870	NW_004457268.1	542613	544287	D	ACA1_260870	join(<542613..542836,542938..543194,543259..543333,543470..543546,543658..543798,543853..543990,544069..>544287)	Acanthamoeba castellanii str. Neff	14912085
ACA1_260880	mRNA	ACA1_260880	NW_004457268.1	544600	546895	D	ACA1_260880	join(<544600..544664,544725..544848,544945..545181,545275..545379,545392..545475,545931..546117,546210..>546895)	Acanthamoeba castellanii str. Neff	14911940
ACA1_260890	mRNA	ACA1_260890	NW_004457268.1	547310	549395	D	ACA1_260890	join(<547310..548093,548165..548297,548389..548509,548617..548730,548812..548907,548999..549184,549291..>549395)	Acanthamoeba castellanii str. Neff	14912198
ACA1_260900	mRNA	ACA1_260900	NW_004457268.1	549771	550408	D	ACA1_260900	join(<549771..549834,549905..550007,550097..550235,550316..>550408)	Acanthamoeba castellanii str. Neff	14911936
ACA1_260910	mRNA	ACA1_260910	NW_004457268.1	550616	551427	D	ACA1_260910	join(<550616..550711,550845..551111,551176..551252,551322..>551427)	Acanthamoeba castellanii str. Neff	14911937
ACA1_260920	mRNA	ACA1_260920	NW_004457268.1	551640	552693	D	ACA1_260920	join(<551640..551658,551720..551836,551903..552048,552109..552420,552481..552537,552610..>552693)	Acanthamoeba castellanii str. Neff	14912015
ACA1_260930	mRNA	ACA1_260930	NW_004457268.1	552737	555491	R	ACA1_260930	complement(join(<552737..553104,553188..553274,553360..553536,553653..554060,554151..554239,554358..554449,554556..554668,554738..554881,554992..555165,555257..>555491))	Acanthamoeba castellanii str. Neff	14911981
ACA1_260940	mRNA	ACA1_260940	NW_004457268.1	555676	559742	D	ACA1_260940	join(<555676..556254,556347..556390,556510..556646,556768..556878,556980..557023,557070..557209,557326..557435,557544..557659,557744..557792,557857..557936,558441..558504,558568..>559742)	Acanthamoeba castellanii str. Neff	14911982
ACA1_260950	mRNA	ACA1_260950	NW_004457268.1	559853	564999	R	ACA1_260950	complement(join(<559853..559980,560081..560209,560281..560377,560482..560533,560688..561081,561228..561298,561484..561604,561764..561902,561988..562172,562281..563288,563378..563536,563674..563733,563822..563933,564032..564235,564312..564410,564521..564638,564740..>564999))	Acanthamoeba castellanii str. Neff	14911952
ACA1_260960	mRNA	ACA1_260960	NW_004457268.1	565233	566406	R	ACA1_260960	complement(join(<565233..565265,565320..565433,565582..565701,565821..565896,565991..566067,566128..566187,566284..>566406))	Acanthamoeba castellanii str. Neff	14911987
ACA1_260970	mRNA	ACA1_260970	NW_004457268.1	567078	568492	D	ACA1_260970	join(<567078..567199,567278..567482,567577..567694,567809..568012,568073..568190,568293..568314,568385..>568492)	Acanthamoeba castellanii str. Neff	14912117
ACA1_260980	mRNA	ACA1_260980	NW_004457268.1	568409	569967	R	ACA1_260980	complement(join(<568409..568637,568725..568795,568924..569477,569559..569640,569740..>569967))	Acanthamoeba castellanii str. Neff	14911970
ACA1_260990	mRNA	ACA1_260990	NW_004457268.1	570037	572452	R	ACA1_260990	complement(join(<570037..570162,570227..570294,570385..570455,570526..570635,570727..570781,570852..570996,571065..571280,571350..571433,571507..571592,571698..571839,571948..572062,572150..>572452))	Acanthamoeba castellanii str. Neff	14911971
ACA1_261000	mRNA	ACA1_261000	NW_004457268.1	573012	579541	R	ACA1_261000	complement(join(<573012..573422,573482..573687,573782..574231,574330..574586,574688..575404,575502..575695,575795..575856,575959..576103,576150..576266,576336..576852,576919..577202,577288..577598,577683..578104,578267..578580,578650..578961,579035..579227,579249..579309,579448..>579541))	Acanthamoeba castellanii str. Neff	14912101
ACA1_261010	mRNA	ACA1_261010	NW_004457268.1	580407	582088	D	ACA1_261010	join(<580407..580499,580594..580789,580903..580997,581084..581158,581305..581400,581521..581580,581658..581720,581798..581887,581966..>582088)	Acanthamoeba castellanii str. Neff	14912154
ACA1_261030	mRNA	ACA1_261030	NW_004457268.1	583530	586011	R	ACA1_261030	complement(join(<583530..583841,583947..584175,584278..584370,584496..584699,584821..584913,585015..585334,585584..585674,585773..>586011))	Acanthamoeba castellanii str. Neff	14912035
ACA1_261040	mRNA	ACA1_261040	NW_004457268.1	586434	589788	D	ACA1_261040	join(<586434..586505,586597..586683,586858..586990,587106..587267,587393..587697,587771..587899,587990..588110,588210..588313,588416..588524,588625..588783,588870..589204,589343..589424,589514..589579,589664..>589788)	Acanthamoeba castellanii str. Neff	14912036
ACA1_261050	mRNA	ACA1_261050	NW_004457268.1	590296	591831	D	ACA1_261050	join(<590296..590311,590415..590512,590649..590717,590884..591011,591126..591300,591424..591571,591680..>591831)	Acanthamoeba castellanii str. Neff	14912142
ACA1_261060	mRNA	ACA1_261060	NW_004457268.1	592055	593718	R	ACA1_261060	complement(join(<592055..592221,592360..592467,592579..592694,592780..592882,593026..593146,593249..593366,593436..593577,593682..>593718))	Acanthamoeba castellanii str. Neff	14912092
ACA1_261070	mRNA	ACA1_261070	NW_004457268.1	594666	595818	D	ACA1_261070	join(<594666..594877,594991..595169,595318..595595,595717..>595818)	Acanthamoeba castellanii str. Neff	14911996
ACA1_261080	mRNA	ACA1_261080	NW_004457268.1	596048	597686	R	ACA1_261080	complement(join(<596048..596122,596227..596349,596428..596583,596659..596794,596894..597038,597139..597263,597346..597448,597548..>597686))	Acanthamoeba castellanii str. Neff	14912130
ACA1_261090	mRNA	ACA1_261090	NW_004457268.1	598054	602516	R	ACA1_261090	complement(join(<598054..599235,599384..599909,600037..600257,600268..602009,602105..>602516))	Acanthamoeba castellanii str. Neff	14911972
ACA1_261200	mRNA	ACA1_261200	NW_004457268.1	603359	604158	D	ACA1_261200	join(<603359..603647,603743..>604158)	Acanthamoeba castellanii str. Neff	14911988
ACA1_261210	mRNA	ACA1_261210	NW_004457268.1	604395	606701	D	ACA1_261210	join(<604395..604655,604760..604840,604957..605214,605321..605381,605462..605525,605603..605712,605869..605933,605949..606083,606265..606355,606487..>606701)	Acanthamoeba castellanii str. Neff	14911989
ACA1_261220	mRNA	ACA1_261220	NW_004457268.1	606825	609363	R	ACA1_261220	complement(join(<606825..606869,606982..607097,607181..607280,607432..607543,607663..607823,607966..608166,608335..608454,608568..608627,608746..608817,608931..609056,609131..609179,609251..>609363))	Acanthamoeba castellanii str. Neff	14912046
ACA1_261230	mRNA	ACA1_261230	NW_004457268.1	609461	610050	R	ACA1_261230	complement(join(<609461..609730,609796..>610050))	Acanthamoeba castellanii str. Neff	14912044
ACA1_261240	mRNA	ACA1_261240	NW_004457268.1	610222	614641	R	ACA1_261240	complement(join(<610222..610339,610411..610498,610509..610528,610551..610861,611025..611136,611204..611462,611527..611590,611639..611931,612008..612146,612217..612324,612450..613041,613122..613315,613326..613439,613584..613898,614010..614144,614226..614283,614364..614460,614563..>614641))	Acanthamoeba castellanii str. Neff	14911973
ACA1_261260	mRNA	ACA1_261260	NW_004457268.1	622643	625458	R	ACA1_261260	complement(join(<622643..622648,622688..622806,622917..623037,623115..623173,623245..623361,623444..623674,623753..623919,624062..624235,624298..624625,624696..624876,624963..625004,625079..625194,625299..>625458))	Acanthamoeba castellanii str. Neff	14912042
ACA1_261270	mRNA	ACA1_261270	NW_004457268.1	625554	626582	D	ACA1_261270	join(<625554..625859,625927..626028,626121..626283,626402..626525,626561..>626582)	Acanthamoeba castellanii str. Neff	14912043
ACA1_261280	mRNA	ACA1_261280	NW_004457268.1	626738	628356	R	ACA1_261280	complement(join(<626738..627114,627186..627357,627379..627422,627499..627637,627735..627899,628038..628183,628290..>628356))	Acanthamoeba castellanii str. Neff	14912168
ACA1_261300	mRNA	ACA1_261300	NW_004457268.1	630486	633053	R	ACA1_261300	complement(join(<630486..631073,631164..631346,631379..631539,631637..631735,631817..631970,632073..632219,632363..632526,632645..632897,632985..>633053))	Acanthamoeba castellanii str. Neff	14912195
ACA1_261310	mRNA	ACA1_261310	NW_004457268.1	633288	635234	D	ACA1_261310	join(<633288..633515,633626..633748,633848..634047,634120..634216,634315..634530,634634..634796,634921..>635234)	Acanthamoeba castellanii str. Neff	14912169
ACA1_261320	mRNA	ACA1_261320	NW_004457268.1	636061	638132	R	ACA1_261320	complement(join(<636061..636103,636174..636304,636393..636551,636631..636927,636989..637152,637230..637323,637389..637513,637581..637884,637965..>638132))	Acanthamoeba castellanii str. Neff	14911953
ACA1_261330	mRNA	ACA1_261330	NW_004457268.1	638957	639402	D	ACA1_261330	join(<638957..639103,639202..>639402)	Acanthamoeba castellanii str. Neff	14911954
ACA1_261340	mRNA	ACA1_261340	NW_004457268.1	639521	640207	R	ACA1_261340	complement(join(<639521..640126,640151..>640207))	Acanthamoeba castellanii str. Neff	14912018
ACA1_261350	mRNA	ACA1_261350	NW_004457268.1	642239	643471	D	ACA1_261350	<642239..>643471	Acanthamoeba castellanii str. Neff	14912176
ACA1_261360	mRNA	ACA1_261360	NW_004457268.1	643539	645282	R	ACA1_261360	complement(join(<643539..643746,643823..643989,644072..644131,644274..644417,644514..644689,644982..>645282))	Acanthamoeba castellanii str. Neff	14912177
ACA1_261370	mRNA	ACA1_261370	NW_004457268.1	645450	653969	D	ACA1_261370	join(<645450..645771,645867..645914,646034..646211,646306..646356,646473..646548,646633..646762,646841..646968,647081..647297,647391..647532,647747..647915,648003..648071,648188..648345,648434..648546,648604..648695,648823..648930,649021..649116,649279..649443,649543..649610,649701..649794,649931..650033,650119..650171,650249..650342,650449..650610,650707..650862,650946..651148,651254..651362,651441..651531,651616..651712,651784..651850,651963..652129,652237..652315,652428..652546,652646..652840,652947..653157,653261..653328,653450..653545,653638..653787,653922..>653969)	Acanthamoeba castellanii str. Neff	14911999
ACA1_261380	mRNA	ACA1_261380	NW_004457268.1	654226	655050	R	ACA1_261380	complement(join(<654226..654523,654598..654631,654723..>655050))	Acanthamoeba castellanii str. Neff	14911978
ACA1_261390	mRNA	ACA1_261390	NW_004457268.1	655927	657540	D	ACA1_261390	join(<655927..656079,656145..656279,656401..656715,656763..656823,656940..657038,657159..657292,657445..>657540)	Acanthamoeba castellanii str. Neff	14912106
ACA1_261400	mRNA	ACA1_261400	NW_004457268.1	657702	663962	R	ACA1_261400	complement(join(<657702..658708,658786..659762,659871..660250,660346..660462,660527..660786,660857..661113,661174..661324,661388..661523,661598..661741,661844..662085,662154..662506,662618..662931,663024..663332,663441..663581,663696..663756,663877..>663962))	Acanthamoeba castellanii str. Neff	14912083
ACA1_261410	mRNA	ACA1_261410	NW_004457268.1	664782	669233	D	ACA1_261410	join(<664782..665024,665204..665338,665394..665600,665693..665876,665951..666051,666131..666667,666762..667244,667319..667601,667854..667988,668076..668336,668424..668785,668886..669026,669138..>669233)	Acanthamoeba castellanii str. Neff	14912084
ACA1_261420	mRNA	ACA1_261420	NW_004457268.1	669688	671637	D	ACA1_261420	join(<669688..669779,669864..669969,670128..670238,670339..670467,670719..670859,671182..671295,671411..671515,671566..>671637)	Acanthamoeba castellanii str. Neff	14912077
ACA1_261430	mRNA	ACA1_261430	NW_004457268.1	672416	678997	D	ACA1_261430	join(<672416..672488,672584..672686,672769..672829,672925..673059,673232..673543,673639..673952,674038..674387,674467..674861,674944..675112,675188..675335,675422..675666,675780..676039,676132..676248,676355..676513,676596..676795,676948..677728,677897..>678997)	Acanthamoeba castellanii str. Neff	14911975
ACA1_261440	mRNA	ACA1_261440	NW_004457268.1	679265	683101	R	ACA1_261440	complement(join(<679265..679377,679488..679608,679682..679779,679882..679961,680047..680135,680284..680364,680458..680550,680643..680917,681044..681215,681332..681742,681833..682009,682156..682218,682326..682495,682577..682652,682762..682916,683047..>683101))	Acanthamoeba castellanii str. Neff	14911976
ACA1_261450	mRNA	ACA1_261450	NW_004457268.1	683284	686810	R	ACA1_261450	complement(join(<683284..683377,683490..683743,683826..683946,684045..684426,684560..684647,684720..684851,684945..685049,685149..685268,685450..685499,685628..685744,685826..685915,685994..686155,686285..>686810))	Acanthamoeba castellanii str. Neff	14912013
ACA1_261460	mRNA	ACA1_261460	NW_004457268.1	687041	688519	R	ACA1_261460	complement(join(<687041..687172,687294..687389,687461..687511,687594..687742,687840..687905,688057..688177,688269..688309,688435..>688519))	Acanthamoeba castellanii str. Neff	14912105
ACA1_261470	mRNA	ACA1_261470	NW_004457268.1	688892	689547	D	ACA1_261470	join(<688892..688960,689044..689169,689256..689372,689476..>689547)	Acanthamoeba castellanii str. Neff	14912017
ACA1_261480	mRNA	ACA1_261480	NW_004457268.1	689757	691276	D	ACA1_261480	join(<689757..690058,690151..690246,690360..690492,690588..690682,690766..690827,690913..691021,691099..>691276)	Acanthamoeba castellanii str. Neff	14912076
ACA1_261490	mRNA	ACA1_261490	NW_004457268.1	691721	693103	R	ACA1_261490	complement(<691721..>693103)	Acanthamoeba castellanii str. Neff	14912031
ACA1_261500	mRNA	ACA1_261500	NW_004457268.1	694121	695311	R	ACA1_261500	complement(<694121..>695311)	Acanthamoeba castellanii str. Neff	14912032
ACA1_261510	mRNA	ACA1_261510	NW_004457268.1	695890	697192	R	ACA1_261510	complement(join(<695890..696047,696167..696473,696590..696717,696871..>697192))	Acanthamoeba castellanii str. Neff	14911963
ACA1_261520	mRNA	ACA1_261520	NW_004457268.1	697330	697698	R	ACA1_261520	complement(join(<697330..697392,697490..697569,697653..>697698))	Acanthamoeba castellanii str. Neff	14911964
ACA1_261530	mRNA	ACA1_261530	NW_004457268.1	698694	700620	D	ACA1_261530	join(<698694..699249,699276..699583,699651..699914,699985..700149,700211..700427,700499..>700620)	Acanthamoeba castellanii str. Neff	14911962
ACA1_261540	mRNA	ACA1_261540	NW_004457268.1	701213	702435	D	ACA1_261540	join(<701213..701254,701317..>702435)	Acanthamoeba castellanii str. Neff	14912173
ACA1_261550	mRNA	ACA1_261550	NW_004457268.1	702512	704124	D	ACA1_261550	join(<702512..702944,703019..703071,703168..703285,703405..703512,703575..703717,703794..703872,703973..>704124)	Acanthamoeba castellanii str. Neff	14912174
ACA1_261560	mRNA	ACA1_261560	NW_004457268.1	704271	704768	D	ACA1_261560	<704271..>704768	Acanthamoeba castellanii str. Neff	14912023
ACA1_261570	mRNA	ACA1_261570	NW_004457268.1	705174	706818	R	ACA1_261570	complement(join(<705174..705445,705555..705662,705773..705917,706020..706099,706178..706277,706371..706609,706683..>706818))	Acanthamoeba castellanii str. Neff	14912024
ACA1_261600	mRNA	ACA1_261600	NW_004457268.1	720711	722084	R	ACA1_261600	complement(join(<720711..720783,720880..720969,721055..721167,721255..721415,721516..721613,721714..>722084))	Acanthamoeba castellanii str. Neff	14912059
ACA1_261610	mRNA	ACA1_261610	NW_004457268.1	722785	723577	D	ACA1_261610	join(<722785..723104,723199..>723577)	Acanthamoeba castellanii str. Neff	14912060
ACA1_261620	mRNA	ACA1_261620	NW_004457268.1	723797	724359	R	ACA1_261620	complement(join(<723797..724022,724115..>724359))	Acanthamoeba castellanii str. Neff	14912103
ACA1_261630	mRNA	ACA1_261630	NW_004457268.1	724953	725629	D	ACA1_261630	join(<724953..725125,725248..725424,725512..>725629)	Acanthamoeba castellanii str. Neff	14912134
ACA1_261640	mRNA	ACA1_261640	NW_004457268.1	725771	728887	D	ACA1_261640	join(<725771..726059,726219..726314,726414..727913,728005..728054,728156..728472,728590..728686,728780..>728887)	Acanthamoeba castellanii str. Neff	14912135
ACA1_261650	mRNA	ACA1_261650	NW_004457268.1	729001	730374	R	ACA1_261650	complement(join(<729001..729111,729135..729205,729283..729409,729600..729711,729830..729931,730058..730174,730265..>730374))	Acanthamoeba castellanii str. Neff	14911948
ACA1_027150	mRNA	ACA1_027150	NW_004457267.1	485	844	R	ACA1_027150	complement(<485..>844)	Acanthamoeba castellanii str. Neff	14911935
ACA1_027160	mRNA	ACA1_027160	NW_004457267.1	1005	4034	D	ACA1_027160	join(<1005..1558,1740..1843,1955..2566,2659..2956,3046..3211,3275..3361,3456..3553,3653..3817,3912..>4034)	Acanthamoeba castellanii str. Neff	14911934
ACA1_027270	mRNA	ACA1_027270	NW_004457267.1	8566	9546	R	ACA1_027270	complement(join(<8566..8783,8866..8949,9043..9154,9235..>9546))	Acanthamoeba castellanii str. Neff	14911933
ACA1_027280	mRNA	ACA1_027280	NW_004457267.1	9719	10691	D	ACA1_027280	join(<9719..9812,9887..10065,10620..>10691)	Acanthamoeba castellanii str. Neff	14911931
ACA1_027390	mRNA	ACA1_027390	NW_004457267.1	10814	11141	R	ACA1_027390	complement(join(<10814..11019,11107..>11141))	Acanthamoeba castellanii str. Neff	14911932
ACA1_032200	mRNA	ACA1_032200	NW_004457266.1	5720	6695	D	ACA1_032200	join(<5720..5858,5930..6085,6200..6320,6620..>6695)	Acanthamoeba castellanii str. Neff	14911928
ACA1_032210	mRNA	ACA1_032210	NW_004457266.1	6863	7648	R	ACA1_032210	complement(join(<6863..7064,7207..7624,7645..>7648))	Acanthamoeba castellanii str. Neff	14911929
ACA1_032320	mRNA	ACA1_032320	NW_004457266.1	12434	14186	R	ACA1_032320	complement(join(<12434..12589,12653..12744,12801..12927,13022..13056,13123..13197,13245..13328,13756..13827,13884..13967,14051..>14186))	Acanthamoeba castellanii str. Neff	14911930
ACA1_032330	mRNA	ACA1_032330	NW_004457266.1	14344	14658	D	ACA1_032330	join(<14344..14491,14576..>14658)	Acanthamoeba castellanii str. Neff	14911927
ACA1_121120	mRNA	ACA1_121120	NW_004457265.1	119	797	R	ACA1_121120	complement(join(<119..280,390..>797))	Acanthamoeba castellanii str. Neff	14911923
ACA1_121230	mRNA	ACA1_121230	NW_004457265.1	7161	8355	R	ACA1_121230	complement(join(<7161..7175,7188..7268,7339..7446,7525..7758,7882..>8355))	Acanthamoeba castellanii str. Neff	14911917
ACA1_121240	mRNA	ACA1_121240	NW_004457265.1	9210	11160	R	ACA1_121240	complement(join(<9210..9279,9363..9529,9650..9797,9909..10095,10191..10327,10403..10469,10609..10705,10873..>11160))	Acanthamoeba castellanii str. Neff	14911904
ACA1_121250	mRNA	ACA1_121250	NW_004457265.1	11382	13882	R	ACA1_121250	complement(join(<11382..11525,11652..11791,11908..12061,12133..12197,12302..12450,12542..12668,12743..12877,12984..13257,13346..13552,13673..>13882))	Acanthamoeba castellanii str. Neff	14911915
ACA1_121260	mRNA	ACA1_121260	NW_004457265.1	14378	18834	D	ACA1_121260	join(<14378..15265,15405..15554,15651..15905,15989..16078,16169..16813,16912..17542,17610..17691,17920..18052,18138..18200,18271..18373,18467..18636,18736..>18834)	Acanthamoeba castellanii str. Neff	14911916
ACA1_121270	mRNA	ACA1_121270	NW_004457265.1	19008	24569	D	ACA1_121270	join(<19008..19091,19169..19637,19727..19878,19972..20060,20167..20405,20525..20640,20718..20787,20860..21017,21108..21208,21285..21364,21454..21606,21700..21779,21850..22078,22149..22258,22353..22508,22588..23268,23329..23440,23527..23606,23733..24042,24129..24375,24461..>24569)	Acanthamoeba castellanii str. Neff	14911862
ACA1_121280	mRNA	ACA1_121280	NW_004457265.1	24971	25437	R	ACA1_121280	complement(join(<24971..25153,25258..>25437))	Acanthamoeba castellanii str. Neff	14911865
ACA1_121290	mRNA	ACA1_121290	NW_004457265.1	25781	26524	R	ACA1_121290	complement(join(<25781..26016,26050..26175,26227..>26524))	Acanthamoeba castellanii str. Neff	14911895
ACA1_121300	mRNA	ACA1_121300	NW_004457265.1	26705	27736	R	ACA1_121300	complement(join(<26705..26856,26991..27116,27150..27257,27628..>27736))	Acanthamoeba castellanii str. Neff	14911896
ACA1_121310	mRNA	ACA1_121310	NW_004457265.1	29741	29986	R	ACA1_121310	complement(<29741..>29986)	Acanthamoeba castellanii str. Neff	14911907
ACA1_121320	mRNA	ACA1_121320	NW_004457265.1	33399	33824	D	ACA1_121320	<33399..>33824	Acanthamoeba castellanii str. Neff	14911898
ACA1_121430	mRNA	ACA1_121430	NW_004457265.1	36203	36760	R	ACA1_121430	complement(join(<36203..36295,36353..>36760))	Acanthamoeba castellanii str. Neff	14911899
ACA1_121440	mRNA	ACA1_121440	NW_004457265.1	37238	38597	D	ACA1_121440	join(<37238..38050,38583..>38597)	Acanthamoeba castellanii str. Neff	14911870
ACA1_121450	mRNA	ACA1_121450	NW_004457265.1	39394	40089	R	ACA1_121450	complement(<39394..>40089)	Acanthamoeba castellanii str. Neff	14911871
ACA1_121470	mRNA	ACA1_121470	NW_004457265.1	41956	42820	R	ACA1_121470	complement(join(<41956..41974,42000..>42820))	Acanthamoeba castellanii str. Neff	14911885
ACA1_121480	mRNA	ACA1_121480	NW_004457265.1	45489	47676	R	ACA1_121480	complement(join(<45489..45547,45898..47395,47455..>47676))	Acanthamoeba castellanii str. Neff	14911874
ACA1_121490	mRNA	ACA1_121490	NW_004457265.1	48468	50863	R	ACA1_121490	complement(join(<48468..48850,49074..49234,49388..49565,49856..50131,50809..>50863))	Acanthamoeba castellanii str. Neff	14911875
ACA1_121500	mRNA	ACA1_121500	NW_004457265.1	51353	53332	D	ACA1_121500	join(<51353..51597,51720..51862,51946..52053,52200..52251,52333..52406,52505..52629,52738..52931,53023..>53332)	Acanthamoeba castellanii str. Neff	14911890
ACA1_121510	mRNA	ACA1_121510	NW_004457265.1	53439	54374	D	ACA1_121510	join(<53439..53860,53949..54058,54121..>54374)	Acanthamoeba castellanii str. Neff	14911888
ACA1_121520	mRNA	ACA1_121520	NW_004457265.1	54573	55718	D	ACA1_121520	join(<54573..54612,54677..54807,54880..54984,55095..>55718)	Acanthamoeba castellanii str. Neff	14911889
ACA1_121530	mRNA	ACA1_121530	NW_004457265.1	55921	56562	D	ACA1_121530	<55921..>56562	Acanthamoeba castellanii str. Neff	14911911
ACA1_121540	mRNA	ACA1_121540	NW_004457265.1	56734	58491	D	ACA1_121540	join(<56734..56845,56885..57107,57175..57295,57368..57476,57562..57609,57686..57790,57864..57920,57995..58089,58162..58242,58342..>58491)	Acanthamoeba castellanii str. Neff	14911925
ACA1_121550	mRNA	ACA1_121550	NW_004457265.1	58592	59021	D	ACA1_121550	join(<58592..58621,58707..>59021)	Acanthamoeba castellanii str. Neff	14911926
ACA1_121560	mRNA	ACA1_121560	NW_004457265.1	59074	61824	D	ACA1_121560	join(<59074..59259,59317..59474,59555..59639,59729..59811,59892..60018,60160..60232,60417..60580,60668..60719,60796..60925,61040..61173,61319..61518,61642..>61824)	Acanthamoeba castellanii str. Neff	14911891
ACA1_121570	mRNA	ACA1_121570	NW_004457265.1	62059	65710	R	ACA1_121570	complement(join(<62059..62122,62289..63428,63511..63573,63678..65154,65278..>65710))	Acanthamoeba castellanii str. Neff	14911922
ACA1_121580	mRNA	ACA1_121580	NW_004457265.1	66120	67761	R	ACA1_121580	complement(join(<66120..66147,66354..66483,66569..66683,66819..66907,66980..67008,67113..67161,67254..67347,67573..>67761))	Acanthamoeba castellanii str. Neff	14911876
ACA1_121590	mRNA	ACA1_121590	NW_004457265.1	69825	70507	D	ACA1_121590	join(<69825..69867,69950..70002,70280..>70507)	Acanthamoeba castellanii str. Neff	14911903
ACA1_121600	mRNA	ACA1_121600	NW_004457265.1	70687	72494	R	ACA1_121600	complement(join(<70687..70717,71080..71209,71295..71409,71503..71633,71714..71742,71845..71893,71985..72078,72156..72188,72306..>72494))	Acanthamoeba castellanii str. Neff	14911866
ACA1_121710	mRNA	ACA1_121710	NW_004457265.1	73375	75272	D	ACA1_121710	join(<73375..73510,73592..73724,74008..74203,74217..74534,74655..>75272)	Acanthamoeba castellanii str. Neff	14911867
ACA1_121720	mRNA	ACA1_121720	NW_004457265.1	75768	78607	R	ACA1_121720	complement(join(<75768..75997,76091..76173,76246..76400,76695..76860,76980..77074,77160..77278,77351..77439,77523..77625,77821..77891,77968..78008,78026..78036,78132..78249,78344..>78607))	Acanthamoeba castellanii str. Neff	14911860
ACA1_121740	mRNA	ACA1_121740	NW_004457265.1	84106	85384	D	ACA1_121740	join(<84106..84472,84559..84654,84717..84888,84964..85191,85282..>85384)	Acanthamoeba castellanii str. Neff	14911924
ACA1_121750	mRNA	ACA1_121750	NW_004457265.1	85739	89393	D	ACA1_121750	join(<85739..86243,86360..86400,86481..86834,86920..87088,87169..87297,87412..87529,87634..87785,87918..88158,88234..88836,88965..89146,89260..>89393)	Acanthamoeba castellanii str. Neff	14911909
ACA1_121760	mRNA	ACA1_121760	NW_004457265.1	90239	91343	D	ACA1_121760	join(<90239..90392,90475..>91343)	Acanthamoeba castellanii str. Neff	14911910
ACA1_121770	mRNA	ACA1_121770	NW_004457265.1	91526	92146	R	ACA1_121770	complement(<91526..>92146)	Acanthamoeba castellanii str. Neff	14911900
ACA1_121780	mRNA	ACA1_121780	NW_004457265.1	92904	96389	D	ACA1_121780	join(<92904..93181,93260..>96389)	Acanthamoeba castellanii str. Neff	14911921
ACA1_121790	mRNA	ACA1_121790	NW_004457265.1	96802	97577	D	ACA1_121790	join(<96802..96914,97002..97165,97256..97327,97399..97491,97537..>97577)	Acanthamoeba castellanii str. Neff	14911877
ACA1_121810	mRNA	ACA1_121810	NW_004457265.1	101992	102417	D	ACA1_121810	<101992..>102417	Acanthamoeba castellanii str. Neff	14911905
ACA1_121830	mRNA	ACA1_121830	NW_004457265.1	103551	105851	R	ACA1_121830	complement(join(<103551..103764,103853..104007,104119..104475,104556..104699,104805..105033,105126..105394,105525..>105851))	Acanthamoeba castellanii str. Neff	14911872
ACA1_121840	mRNA	ACA1_121840	NW_004457265.1	106470	112403	D	ACA1_121840	join(<106470..106631,106832..106881,106966..107215,107286..107385,107426..108049,108142..108254,108323..108547,108610..108868,109067..109160,109231..109297,109450..109790,109871..109976,110050..110166,110269..110630,110690..111243,111303..111596,111681..111789,111964..112287,112370..>112403)	Acanthamoeba castellanii str. Neff	14911873
ACA1_121950	mRNA	ACA1_121950	NW_004457265.1	112721	113020	D	ACA1_121950	<112721..>113020	Acanthamoeba castellanii str. Neff	14911859
ACA1_121960	mRNA	ACA1_121960	NW_004457265.1	113322	113689	R	ACA1_121960	complement(join(<113322..113551,113647..>113689))	Acanthamoeba castellanii str. Neff	14911894
ACA1_122070	mRNA	ACA1_122070	NW_004457265.1	115222	115746	D	ACA1_122070	<115222..>115746	Acanthamoeba castellanii str. Neff	14911892
ACA1_122080	mRNA	ACA1_122080	NW_004457265.1	115938	118586	D	ACA1_122080	join(<115938..116566,116689..116799,116887..116945,117048..117132,117222..117342,117434..117554,117638..117767,117846..117928,118025..118100,118171..118255,118334..118432,118524..>118586)	Acanthamoeba castellanii str. Neff	14911893
ACA1_122190	mRNA	ACA1_122190	NW_004457265.1	119031	119323	R	ACA1_122190	complement(join(<119031..119126,119249..>119323))	Acanthamoeba castellanii str. Neff	14911914
ACA1_122300	mRNA	ACA1_122300	NW_004457265.1	120062	121691	D	ACA1_122300	join(<120062..120150,120218..120386,120492..120565,120675..120793,120866..120935,121011..121087,121168..121241,121369..121471,121558..>121691)	Acanthamoeba castellanii str. Neff	14911912
ACA1_122310	mRNA	ACA1_122310	NW_004457265.1	121804	122717	D	ACA1_122310	join(<121804..121956,122052..122246,122401..122482,122587..>122717)	Acanthamoeba castellanii str. Neff	14911913
ACA1_122320	mRNA	ACA1_122320	NW_004457265.1	122753	123318	D	ACA1_122320	join(<122753..122826,122938..123005,123122..>123318)	Acanthamoeba castellanii str. Neff	14911920
ACA1_122330	mRNA	ACA1_122330	NW_004457265.1	123417	124833	D	ACA1_122330	join(<123417..123450,123616..123698,123763..123921,123991..124042,124274..124399,124470..124541,124629..124703,124784..>124833)	Acanthamoeba castellanii str. Neff	14911886
ACA1_122350	mRNA	ACA1_122350	NW_004457265.1	129088	129891	R	ACA1_122350	complement(join(<129088..129159,129210..129255,129272..129679,129749..>129891))	Acanthamoeba castellanii str. Neff	14911879
ACA1_122360	mRNA	ACA1_122360	NW_004457265.1	130798	134648	D	ACA1_122360	join(<130798..131652,131776..131950,132031..132071,132151..132586,132699..132823,132902..133090,133119..133145,133188..133346,133450..133578,133645..133754,133954..134068,134133..>134648)	Acanthamoeba castellanii str. Neff	14911880
ACA1_122370	mRNA	ACA1_122370	NW_004457265.1	134783	135919	R	ACA1_122370	complement(join(<134783..134875,134967..135028,135113..135235,135314..135651,135662..135759,135839..>135919))	Acanthamoeba castellanii str. Neff	14911897
ACA1_122380	mRNA	ACA1_122380	NW_004457265.1	136636	143189	D	ACA1_122380	join(<136636..136687,136765..137113,137267..137513,137595..138080,138180..138303,138408..138703,138797..138960,139036..139052,139212..139402,139490..139700,139774..139934,140021..140143,140222..140338,140433..140591,140670..140869,140964..141650,141758..142017,142119..142558,142765..142980,143079..>143189)	Acanthamoeba castellanii str. Neff	14911868
ACA1_122700	mRNA	ACA1_122700	NW_004457265.1	148811	151140	D	ACA1_122700	join(<148811..148861,148955..149104,149185..149261,149374..149452,149548..149765,149858..150085,150164..150252,150321..150457,150563..150704,150779..150935,151017..>151140)	Acanthamoeba castellanii str. Neff	14911918
ACA1_122710	mRNA	ACA1_122710	NW_004457265.1	151672	152458	R	ACA1_122710	complement(join(<151672..151823,151898..152090,152173..152307,152381..>152458))	Acanthamoeba castellanii str. Neff	14911919
ACA1_122720	mRNA	ACA1_122720	NW_004457265.1	154069	154500	R	ACA1_122720	complement(<154069..>154500)	Acanthamoeba castellanii str. Neff	14911861
ACA1_122730	mRNA	ACA1_122730	NW_004457265.1	154613	154948	D	ACA1_122730	<154613..>154948	Acanthamoeba castellanii str. Neff	14911901
ACA1_122740	mRNA	ACA1_122740	NW_004457265.1	155006	156640	D	ACA1_122740	join(<155006..155308,155424..156251,156277..156464,156475..>156640)	Acanthamoeba castellanii str. Neff	14911902
ACA1_122760	mRNA	ACA1_122760	NW_004457265.1	159265	161070	D	ACA1_122760	join(<159265..159381,159521..159733,159808..159990,160078..160330,160404..160503,160578..160739,160875..>161070)	Acanthamoeba castellanii str. Neff	14911863
ACA1_122770	mRNA	ACA1_122770	NW_004457265.1	162021	162173	R	ACA1_122770	complement(<162021..>162173)	Acanthamoeba castellanii str. Neff	14911864
ACA1_122780	mRNA	ACA1_122780	NW_004457265.1	163385	166286	D	ACA1_122780	join(<163385..163837,165061..165189,165930..>166286)	Acanthamoeba castellanii str. Neff	14911882
ACA1_122890	mRNA	ACA1_122890	NW_004457265.1	167322	168056	D	ACA1_122890	join(<167322..167457,167531..167663,167921..>168056)	Acanthamoeba castellanii str. Neff	14911883
ACA1_323100	mRNA	ACA1_323100	NW_004457264.1	103	2111	R	ACA1_323100	complement(join(<103..211,222..279,391..517,602..716,792..878,956..1062,1449..1493,1602..1718,1809..1895,1980..>2111))	Acanthamoeba castellanii str. Neff	14911847
ACA1_323110	mRNA	ACA1_323110	NW_004457264.1	3300	5254	D	ACA1_323110	join(<3300..3633,3713..3980,4065..4257,4361..4448,4544..4651,4737..4819,4916..5019,5119..>5254)	Acanthamoeba castellanii str. Neff	14911857
ACA1_323120	mRNA	ACA1_323120	NW_004457264.1	5563	8748	R	ACA1_323120	complement(join(<5563..5687,5765..5939,6042..6455,6630..6753,6864..7067,7170..7603,7714..7890,8006..8261,8510..>8748))	Acanthamoeba castellanii str. Neff	14911849
ACA1_323130	mRNA	ACA1_323130	NW_004457264.1	10527	11891	R	ACA1_323130	complement(join(<10527..10677,10748..10823,10920..10999,11081..11228,11312..11364,11455..11564,11638..11693,11759..>11891))	Acanthamoeba castellanii str. Neff	14911850
ACA1_323140	mRNA	ACA1_323140	NW_004457264.1	12000	16178	R	ACA1_323140	complement(join(<12000..13688,13777..13865,13947..14049,14141..14239,14334..14504,14594..14835,15056..>16178))	Acanthamoeba castellanii str. Neff	14911852
ACA1_323150	mRNA	ACA1_323150	NW_004457264.1	17645	20804	R	ACA1_323150	complement(join(<17645..17755,17825..18336,18414..18655,18733..18818,18906..19340,19445..19580,19676..19869,19970..20021,20046..20105,20234..20346,20467..20610,20715..>20804))	Acanthamoeba castellanii str. Neff	14911858
ACA1_323160	mRNA	ACA1_323160	NW_004457264.1	21320	23026	D	ACA1_323160	join(<21320..21502,21609..21747,21803..22042,22137..22195,22275..22357,22481..22581,22666..22792,22891..>23026)	Acanthamoeba castellanii str. Neff	14911855
ACA1_323170	mRNA	ACA1_323170	NW_004457264.1	23152	26900	R	ACA1_323170	complement(join(<23152..23319,23441..23575,23647..24761,24844..25174,25248..25353,25469..25527,25603..25663,25737..25874,25957..26165,26261..26338,26416..26544,26663..26760,26804..>26900))	Acanthamoeba castellanii str. Neff	14911853
ACA1_323180	mRNA	ACA1_323180	NW_004457264.1	27100	28011	R	ACA1_323180	complement(join(<27100..27251,27349..27421,27514..>28011))	Acanthamoeba castellanii str. Neff	14911848
ACA1_323190	mRNA	ACA1_323190	NW_004457264.1	28234	29558	D	ACA1_323190	join(<28234..28588,28670..28736,28793..28978,29054..29210,29225..29290,29367..>29558)	Acanthamoeba castellanii str. Neff	14911851
ACA1_323200	mRNA	ACA1_323200	NW_004457264.1	29675	30519	R	ACA1_323200	complement(join(<29675..29736,29810..29872,29929..30027,30123..30270,30340..>30519))	Acanthamoeba castellanii str. Neff	14911856
ACA1_323210	mRNA	ACA1_323210	NW_004457264.1	30851	31849	R	ACA1_323210	complement(join(<30851..31431,31499..31721,31790..>31849))	Acanthamoeba castellanii str. Neff	14911854
ACA1_134070	mRNA	ACA1_134070	NW_004457263.1	214	984	D	ACA1_134070	<214..>984	Acanthamoeba castellanii str. Neff	14911802
ACA1_134080	mRNA	ACA1_134080	NW_004457263.1	1198	1950	D	ACA1_134080	<1198..>1950	Acanthamoeba castellanii str. Neff	14911791
ACA1_134090	mRNA	ACA1_134090	NW_004457263.1	2269	4590	D	ACA1_134090	<2269..>4590	Acanthamoeba castellanii str. Neff	14911782
ACA1_134100	mRNA	ACA1_134100	NW_004457263.1	5034	5461	D	ACA1_134100	join(<5034..5282,5300..>5461)	Acanthamoeba castellanii str. Neff	14911841
ACA1_134110	mRNA	ACA1_134110	NW_004457263.1	6092	6806	D	ACA1_134110	join(<6092..6655,6795..>6806)	Acanthamoeba castellanii str. Neff	14911818
ACA1_134120	mRNA	ACA1_134120	NW_004457263.1	8093	8377	R	ACA1_134120	complement(<8093..>8377)	Acanthamoeba castellanii str. Neff	14911809
ACA1_134130	mRNA	ACA1_134130	NW_004457263.1	10132	10866	D	ACA1_134130	<10132..>10866	Acanthamoeba castellanii str. Neff	14911836
ACA1_134140	mRNA	ACA1_134140	NW_004457263.1	11191	12537	R	ACA1_134140	complement(join(<11191..11809,12053..>12537))	Acanthamoeba castellanii str. Neff	14911797
ACA1_134150	mRNA	ACA1_134150	NW_004457263.1	14528	16141	R	ACA1_134150	complement(<14528..>16141)	Acanthamoeba castellanii str. Neff	14911839
ACA1_134270	mRNA	ACA1_134270	NW_004457263.1	22632	23787	R	ACA1_134270	complement(join(<22632..23030,23133..23291,23377..>23787))	Acanthamoeba castellanii str. Neff	14911803
ACA1_134280	mRNA	ACA1_134280	NW_004457263.1	24071	25243	R	ACA1_134280	complement(join(<24071..24120,24373..24480,24587..24742,24935..25051,25144..>25243))	Acanthamoeba castellanii str. Neff	14911828
ACA1_134290	mRNA	ACA1_134290	NW_004457263.1	26069	26519	R	ACA1_134290	complement(join(<26069..26158,26337..>26519))	Acanthamoeba castellanii str. Neff	14911787
ACA1_134400	mRNA	ACA1_134400	NW_004457263.1	28958	34517	D	ACA1_134400	join(<28958..29020,29128..29286,29409..29591,29671..29751,31639..31780,31884..32293,34057..34139,34205..>34517)	Acanthamoeba castellanii str. Neff	14911829
ACA1_134610	mRNA	ACA1_134610	NW_004457263.1	35360	36048	D	ACA1_134610	join(<35360..35587,35674..35830,35873..>36048)	Acanthamoeba castellanii str. Neff	14911817
ACA1_134620	mRNA	ACA1_134620	NW_004457263.1	36439	37626	R	ACA1_134620	complement(join(<36439..36658,36757..37046,37126..37453,37544..>37626))	Acanthamoeba castellanii str. Neff	14911781
ACA1_134730	mRNA	ACA1_134730	NW_004457263.1	38823	41597	D	ACA1_134730	join(<38823..38967,39376..39447,39550..39932,40002..40119,40229..40290,40366..40453,40556..40737,40884..40988,41073..41158,41282..41412,41512..>41597)	Acanthamoeba castellanii str. Neff	14911830
ACA1_134740	mRNA	ACA1_134740	NW_004457263.1	41745	42703	R	ACA1_134740	complement(join(<41745..42429,42513..>42703))	Acanthamoeba castellanii str. Neff	14911844
ACA1_134750	mRNA	ACA1_134750	NW_004457263.1	43546	44834	D	ACA1_134750	join(<43546..43847,43882..43918,43935..44348,44450..44599,44667..>44834)	Acanthamoeba castellanii str. Neff	14911816
ACA1_134760	mRNA	ACA1_134760	NW_004457263.1	45056	45741	D	ACA1_134760	join(<45056..45112,45209..45404,45452..45585,45608..>45741)	Acanthamoeba castellanii str. Neff	14911843
ACA1_134870	mRNA	ACA1_134870	NW_004457263.1	46914	52694	R	ACA1_134870	complement(join(<46914..46927,46984..47242,47449..47655,47758..47933,48032..48149,48246..48491,48584..48702,48793..48862,48929..49132,49211..49376,49511..49767,49834..49988,50065..50289,50381..52040,52205..52318,52422..52591,52607..>52694))	Acanthamoeba castellanii str. Neff	14911825
ACA1_134990	mRNA	ACA1_134990	NW_004457263.1	54951	55361	D	ACA1_134990	<54951..>55361	Acanthamoeba castellanii str. Neff	14911812
ACA1_135000	mRNA	ACA1_135000	NW_004457263.1	56846	60014	R	ACA1_135000	complement(join(<56846..57184,57285..57488,57567..57707,57989..58179,58284..59379,59451..>60014))	Acanthamoeba castellanii str. Neff	14911827
ACA1_135110	mRNA	ACA1_135110	NW_004457263.1	64847	65722	R	ACA1_135110	complement(join(<64847..64954,65018..65071,65183..65278,65362..65426,65563..>65722))	Acanthamoeba castellanii str. Neff	14911788
ACA1_135120	mRNA	ACA1_135120	NW_004457263.1	65935	66677	R	ACA1_135120	complement(join(<65935..66041,66142..66262,66363..>66677))	Acanthamoeba castellanii str. Neff	14911831
ACA1_135130	mRNA	ACA1_135130	NW_004457263.1	66680	70930	R	ACA1_135130	complement(join(<66680..67698,67777..68024,68095..68253,68316..68533,68626..68742,68827..68999,69070..69553,69650..69816,69924..70021,70122..70297,70401..70582,70668..70847,70918..>70930))	Acanthamoeba castellanii str. Neff	14911814
ACA1_135140	mRNA	ACA1_135140	NW_004457263.1	71572	73479	D	ACA1_135140	join(<71572..72286,72395..72466,72610..72681,72779..72856,72942..73013,73122..73263,73338..>73479)	Acanthamoeba castellanii str. Neff	14911807
ACA1_135150	mRNA	ACA1_135150	NW_004457263.1	73733	78075	R	ACA1_135150	complement(join(<73733..74989,75061..75201,75254..75593,75688..75786,75803..75864,76170..77042,77140..77364,77440..77880,77962..>78075))	Acanthamoeba castellanii str. Neff	14911842
ACA1_135570	mRNA	ACA1_135570	NW_004457263.1	84439	84876	D	ACA1_135570	<84439..>84876	Acanthamoeba castellanii str. Neff	14911790
ACA1_135580	mRNA	ACA1_135580	NW_004457263.1	85341	86000	D	ACA1_135580	join(<85341..85554,85741..>86000)	Acanthamoeba castellanii str. Neff	14911846
ACA1_135590	mRNA	ACA1_135590	NW_004457263.1	86538	86933	D	ACA1_135590	join(<86538..86681,86739..>86933)	Acanthamoeba castellanii str. Neff	14911820
ACA1_135600	mRNA	ACA1_135600	NW_004457263.1	87687	88185	D	ACA1_135600	join(<87687..87786,87892..87983,88084..>88185)	Acanthamoeba castellanii str. Neff	14911832
ACA1_135610	mRNA	ACA1_135610	NW_004457263.1	88695	91504	D	ACA1_135610	join(<88695..88985,89242..89349,89377..90252,90327..90738,90802..90987,91081..91325,91466..>91504)	Acanthamoeba castellanii str. Neff	14911799
ACA1_135620	mRNA	ACA1_135620	NW_004457263.1	91735	94240	R	ACA1_135620	complement(join(<91735..91817,91986..92231,92318..92404,92529..92638,92752..92867,93014..93271,93431..93535,93739..93836,93949..94081,94214..>94240))	Acanthamoeba castellanii str. Neff	14911833
ACA1_135630	mRNA	ACA1_135630	NW_004457263.1	94467	95717	D	ACA1_135630	join(<94467..94568,94679..94762,94965..>95717)	Acanthamoeba castellanii str. Neff	14911837
ACA1_135640	mRNA	ACA1_135640	NW_004457263.1	95893	99432	R	ACA1_135640	complement(join(<95893..95985,96083..96265,96366..96803,96872..97055,97161..97232,97341..97424,97882..98238,98264..98423,98557..98689,98787..98837,98910..99003,99126..99179,99255..99285,99372..>99432))	Acanthamoeba castellanii str. Neff	14911834
ACA1_135650	mRNA	ACA1_135650	NW_004457263.1	99683	101093	R	ACA1_135650	complement(join(<99683..99776,99850..99980,100035..100151,100220..100296,100375..100510,100587..100717,100787..100968,101038..>101093))	Acanthamoeba castellanii str. Neff	14911783
ACA1_135660	mRNA	ACA1_135660	NW_004457263.1	101883	102783	D	ACA1_135660	join(<101883..102285,102356..>102783)	Acanthamoeba castellanii str. Neff	14911795
ACA1_135670	mRNA	ACA1_135670	NW_004457263.1	103039	104168	R	ACA1_135670	complement(join(<103039..103324,103363..103495,103582..103764,103840..103995,104066..>104168))	Acanthamoeba castellanii str. Neff	14911792
ACA1_135680	mRNA	ACA1_135680	NW_004457263.1	104788	106122	D	ACA1_135680	join(<104788..104969,105077..105147,105281..105370,105439..105529,105611..105744,105807..105973,106087..>106122)	Acanthamoeba castellanii str. Neff	14911798
ACA1_135700	mRNA	ACA1_135700	NW_004457263.1	106999	107978	D	ACA1_135700	join(<106999..107263,107340..107774,107887..>107978)	Acanthamoeba castellanii str. Neff	14911808
ACA1_135910	mRNA	ACA1_135910	NW_004457263.1	109582	110773	R	ACA1_135910	complement(join(<109582..109669,109773..109876,110009..110223,110312..110435,110529..110595,110715..>110773))	Acanthamoeba castellanii str. Neff	14911810
ACA1_135920	mRNA	ACA1_135920	NW_004457263.1	111371	111682	R	ACA1_135920	complement(<111371..>111682)	Acanthamoeba castellanii str. Neff	14911806
ACA1_135930	mRNA	ACA1_135930	NW_004457263.1	115800	118240	D	ACA1_135930	join(<115800..115856,115964..116036,116179..116219,116316..116389,116542..116689,116767..116843,117029..117077,117199..117287,117395..117466,117587..117762,117881..118045,118149..>118240)	Acanthamoeba castellanii str. Neff	14911840
ACA1_135940	mRNA	ACA1_135940	NW_004457263.1	118385	119893	D	ACA1_135940	join(<118385..118435,118456..118865,118953..119079,119166..119240,119336..119417,119483..119543,119644..>119893)	Acanthamoeba castellanii str. Neff	14911826
ACA1_135950	mRNA	ACA1_135950	NW_004457263.1	119961	120619	R	ACA1_135950	complement(join(<119961..120134,120326..>120619))	Acanthamoeba castellanii str. Neff	14911838
ACA1_135960	mRNA	ACA1_135960	NW_004457263.1	120911	122785	R	ACA1_135960	complement(join(<120911..120946,121227..121332,121560..121640,121793..121918,122046..122122,122225..122305,122411..122509,122738..>122785))	Acanthamoeba castellanii str. Neff	14911813
ACA1_136070	mRNA	ACA1_136070	NW_004457263.1	124128	125011	R	ACA1_136070	complement(join(<124128..124163,124278..124378,124502..124561,124672..>125011))	Acanthamoeba castellanii str. Neff	14911811
ACA1_136080	mRNA	ACA1_136080	NW_004457263.1	125154	126198	D	ACA1_136080	join(<125154..125651,125681..125834,125867..>126198)	Acanthamoeba castellanii str. Neff	14911804
ACA1_136090	mRNA	ACA1_136090	NW_004457263.1	126681	127727	D	ACA1_136090	join(<126681..126801,126856..126989,127069..127477,127573..>127727)	Acanthamoeba castellanii str. Neff	14911821
ACA1_136100	mRNA	ACA1_136100	NW_004457263.1	127861	130523	R	ACA1_136100	complement(join(<127861..128043,128169..128295,128428..128565,128660..128847,128950..129082,129143..129260,129365..129426,129525..129589,129703..129806,129889..129989,130229..130247,130326..130349,130424..>130523))	Acanthamoeba castellanii str. Neff	14911801
ACA1_136110	mRNA	ACA1_136110	NW_004457263.1	130836	132329	D	ACA1_136110	join(<130836..131048,131145..131215,131368..131655,131777..131885,131995..132109,132196..>132329)	Acanthamoeba castellanii str. Neff	14911793
ACA1_136120	mRNA	ACA1_136120	NW_004457263.1	132515	133851	D	ACA1_136120	join(<132515..132643,132735..132837,132949..133021,133104..133176,133244..133329,133409..133490,133576..>133851)	Acanthamoeba castellanii str. Neff	14911819
ACA1_136140	mRNA	ACA1_136140	NW_004457263.1	136999	138290	D	ACA1_136140	join(<136999..137628,137730..>138290)	Acanthamoeba castellanii str. Neff	14911815
ACA1_136150	mRNA	ACA1_136150	NW_004457263.1	138924	140293	R	ACA1_136150	complement(join(<138924..139064,139165..139563,139688..139866,139931..140023,140119..>140293))	Acanthamoeba castellanii str. Neff	14911805
ACA1_136160	mRNA	ACA1_136160	NW_004457263.1	140691	143582	D	ACA1_136160	join(<140691..141598,141713..141829,141911..141973,142082..142223,142330..142359,142433..142524,142613..142713,142785..142965,143066..>143582)	Acanthamoeba castellanii str. Neff	14911796
ACA1_136170	mRNA	ACA1_136170	NW_004457263.1	143969	145586	D	ACA1_136170	join(<143969..144051,144240..144381,144481..144600,144715..144917,144999..145407,145494..>145586)	Acanthamoeba castellanii str. Neff	14911823
ACA1_136180	mRNA	ACA1_136180	NW_004457263.1	145846	149167	D	ACA1_136180	join(<145846..145882,146004..146127,146297..146460,146522..146596,146694..146768,146843..146911,146983..147072,147170..147229,147317..147397,147533..147640,147722..147940,148005..148253,148326..>149167)	Acanthamoeba castellanii str. Neff	14911786
ACA1_136190	mRNA	ACA1_136190	NW_004457263.1	149304	151081	D	ACA1_136190	join(<149304..149371,149466..149588,149696..149785,149896..149926,150122..150251,150367..150505,150601..150706,150805..150909,150992..>151081)	Acanthamoeba castellanii str. Neff	14911835
ACA1_136200	mRNA	ACA1_136200	NW_004457263.1	151283	154743	R	ACA1_136200	complement(join(<151283..151501,151602..151892,151989..152147,152235..152567,152646..152913,152992..153056,153128..153444,153531..153658,153733..153880,153962..154136,154231..154294,154364..154467,154552..>154743))	Acanthamoeba castellanii str. Neff	14911822
ACA1_136310	mRNA	ACA1_136310	NW_004457263.1	155176	160153	R	ACA1_136310	complement(join(<155176..155446,155519..155728,155825..155927,156790..156928,157001..157158,157224..157371,157438..157615,157688..157881,157953..158001,158174..158353,158449..158591,158665..158728,158897..158956,159024..159172,159244..159387,159488..159670,159794..159892,159965..160071,160111..>160153))	Acanthamoeba castellanii str. Neff	14911824
ACA1_136520	mRNA	ACA1_136520	NW_004457263.1	160677	161896	R	ACA1_136520	complement(join(<160677..160859,160937..161153,161205..161313,161390..161484,161826..>161896))	Acanthamoeba castellanii str. Neff	14911780
ACA1_136630	mRNA	ACA1_136630	NW_004457263.1	163505	165178	D	ACA1_136630	join(<163505..163736,163812..163869,163938..164044,164350..164570,164674..164791,164880..>165178)	Acanthamoeba castellanii str. Neff	14911784
ACA1_189300	mRNA	ACA1_189300	NW_004457262.1	452	1258	D	ACA1_189300	join(<452..823,911..>1258)	Acanthamoeba castellanii str. Neff	14911758
ACA1_189310	mRNA	ACA1_189310	NW_004457262.1	1768	5863	D	ACA1_189310	join(<1768..1969,2184..2302,2398..2508,2613..2729,2816..3116,3208..3776,3884..4015,4105..4632,4722..4863,4935..5237,5339..5432,5521..>5863)	Acanthamoeba castellanii str. Neff	14911707
ACA1_189320	mRNA	ACA1_189320	NW_004457262.1	6277	8114	R	ACA1_189320	complement(join(<6277..6526,6612..6699,6779..6871,6945..7068,7134..7438,7533..7621,7691..7814,7880..>8114))	Acanthamoeba castellanii str. Neff	14911724
ACA1_189330	mRNA	ACA1_189330	NW_004457262.1	8885	10175	R	ACA1_189330	complement(join(<8885..9013,9182..9316,9445..9540,9678..9744,9835..9894,10000..>10175))	Acanthamoeba castellanii str. Neff	14911732
ACA1_189340	mRNA	ACA1_189340	NW_004457262.1	10366	12439	R	ACA1_189340	complement(join(<10366..10545,10631..10701,10789..10924,11002..11089,11184..11293,11404..11515,11606..11678,11875..12024,12159..12280,12417..>12439))	Acanthamoeba castellanii str. Neff	14911761
ACA1_189360	mRNA	ACA1_189360	NW_004457262.1	15959	17701	R	ACA1_189360	complement(join(<15959..16149,16232..16680,16806..16941,17013..17086,17159..17319,17410..17577,17660..>17701))	Acanthamoeba castellanii str. Neff	14911774
ACA1_189370	mRNA	ACA1_189370	NW_004457262.1	18237	20457	R	ACA1_189370	complement(join(<18237..18511,18582..18683,18763..18849,18942..>20457))	Acanthamoeba castellanii str. Neff	14911719
ACA1_189380	mRNA	ACA1_189380	NW_004457262.1	20618	23309	D	ACA1_189380	join(<20618..21579,21678..21789,21879..21949,22038..22149,22248..22379,22464..22733,22808..22864,22940..23056,23157..>23309)	Acanthamoeba castellanii str. Neff	14911759
ACA1_189390	mRNA	ACA1_189390	NW_004457262.1	23367	25967	R	ACA1_189390	complement(join(<23367..23617,23692..23829,23912..24070,24166..24252,24326..24502,24593..24698,24787..24864,25000..25172,25257..25355,25450..25591,25664..25860,25934..>25967))	Acanthamoeba castellanii str. Neff	14911749
ACA1_189400	mRNA	ACA1_189400	NW_004457262.1	26471	28176	D	ACA1_189400	join(<26471..26945,26991..27383,27539..>28176)	Acanthamoeba castellanii str. Neff	14911738
ACA1_189410	mRNA	ACA1_189410	NW_004457262.1	28407	31724	D	ACA1_189410	join(<28407..29600,29689..29757,29836..29910,29983..30086,30200..30314,30400..30504,30587..30672,30741..30838,30931..31041,31123..31168,31261..31340,31424..31547,31637..>31724)	Acanthamoeba castellanii str. Neff	14911778
ACA1_189420	mRNA	ACA1_189420	NW_004457262.1	32003	34179	D	ACA1_189420	join(<32003..32169,32358..32507,32603..32732,32840..32974,33106..33236,33352..33586,33668..33802,33878..34009,34111..>34179)	Acanthamoeba castellanii str. Neff	14911779
ACA1_189440	mRNA	ACA1_189440	NW_004457262.1	36003	37721	D	ACA1_189440	<36003..>37721	Acanthamoeba castellanii str. Neff	14911762
ACA1_189450	mRNA	ACA1_189450	NW_004457262.1	37892	43851	R	ACA1_189450	complement(join(<37892..38086,38181..38260,38334..38429,38513..38654,38756..38872,38955..39105,39210..39303,39405..39439,39524..39637,39729..40004,40091..40158,40232..40326,40407..40496,40592..40688,40761..40846,40978..41176,41261..41319,41443..41595,41710..41835,41908..41980,42106..42207,42303..42375,42577..42637,42711..42810,42893..43020,43104..43236,43315..43392,43489..>43851))	Acanthamoeba castellanii str. Neff	14911751
ACA1_189460	mRNA	ACA1_189460	NW_004457262.1	44141	44650	R	ACA1_189460	complement(<44141..>44650)	Acanthamoeba castellanii str. Neff	14911755
ACA1_189570	mRNA	ACA1_189570	NW_004457262.1	47766	49062	R	ACA1_189570	complement(join(<47766..47921,48043..48801,48901..>49062))	Acanthamoeba castellanii str. Neff	14911756
ACA1_189580	mRNA	ACA1_189580	NW_004457262.1	49291	52572	R	ACA1_189580	complement(join(<49291..49540,49621..49787,49862..49938,50012..50169,50261..50325,50396..50608,50693..50803,50875..51001,51085..51159,51221..51332,51416..51563,51648..51728,51837..51934,52040..52209,52289..52472,52551..>52572))	Acanthamoeba castellanii str. Neff	14911718
ACA1_189590	mRNA	ACA1_189590	NW_004457262.1	52748	61680	D	ACA1_189590	join(<52748..52927,53000..53297,53365..53584,53645..53930,54010..54123,54182..54502,54570..54767,54834..54971,55037..55182,55261..55524,55601..55862,55944..56075,56134..56455,56519..56764,56835..56974,57039..57264,57352..57441,57507..58413,58489..58748,58834..59096,59168..59412,59492..60257,60327..60458,60543..60795,60914..>61680)	Acanthamoeba castellanii str. Neff	14911721
ACA1_189600	mRNA	ACA1_189600	NW_004457262.1	62334	63617	R	ACA1_189600	complement(join(<62334..62542,62568..62669,62744..62792,62865..63010,63086..63272,63369..>63617))	Acanthamoeba castellanii str. Neff	14911765
ACA1_189610	mRNA	ACA1_189610	NW_004457262.1	63798	64993	D	ACA1_189610	join(<63798..63915,64064..64256,64344..64509,64587..64851,64947..>64993)	Acanthamoeba castellanii str. Neff	14911767
ACA1_189620	mRNA	ACA1_189620	NW_004457262.1	65572	68302	R	ACA1_189620	complement(join(<65572..65764,65831..66089,66176..66876,67016..67219,67309..67463,67563..67753,67807..67932,67966..68173,68243..>68302))	Acanthamoeba castellanii str. Neff	14911771
ACA1_189630	mRNA	ACA1_189630	NW_004457262.1	68796	69896	R	ACA1_189630	complement(join(<68796..68826,68842..68911,68973..69264,69320..69432,69566..>69896))	Acanthamoeba castellanii str. Neff	14911772
ACA1_189640	mRNA	ACA1_189640	NW_004457262.1	69991	72112	R	ACA1_189640	complement(join(<69991..70064,70123..70191,70263..70409,70500..70580,70622..70712,70804..70855,70932..71164,71280..71362,71559..71603,71673..71849,71908..>72112))	Acanthamoeba castellanii str. Neff	14911710
ACA1_189750	mRNA	ACA1_189750	NW_004457262.1	72533	73663	D	ACA1_189750	<72533..>73663	Acanthamoeba castellanii str. Neff	14911715
ACA1_189760	mRNA	ACA1_189760	NW_004457262.1	73841	80470	R	ACA1_189760	complement(join(<73841..74084,74236..74851,74950..75828,75930..76255,76361..76775,76899..77804,77874..77986,78094..78599,78789..79042,79149..79362,79471..79644,79709..79804,79831..80013,80092..80265,80354..>80470))	Acanthamoeba castellanii str. Neff	14911713
ACA1_189770	mRNA	ACA1_189770	NW_004457262.1	81132	82113	R	ACA1_189770	complement(join(<81132..81478,81558..>82113))	Acanthamoeba castellanii str. Neff	14911766
ACA1_189780	mRNA	ACA1_189780	NW_004457262.1	82405	84817	R	ACA1_189780	complement(join(<82405..82580,82675..83313,83419..83580,83594..83690,83823..84023,84118..84288,84354..84481,84585..84675,84770..>84817))	Acanthamoeba castellanii str. Neff	14911701
ACA1_189790	mRNA	ACA1_189790	NW_004457262.1	86074	88038	D	ACA1_189790	join(<86074..86462,86554..86659,86740..86950,87007..87643,87744..87792,87805..>88038)	Acanthamoeba castellanii str. Neff	14911723
ACA1_189800	mRNA	ACA1_189800	NW_004457262.1	88053	89241	D	ACA1_189800	join(<88053..88058,88076..88215,88316..88448,88534..88611,88698..88840,89028..>89241)	Acanthamoeba castellanii str. Neff	14911726
ACA1_189810	mRNA	ACA1_189810	NW_004457262.1	89478	95068	R	ACA1_189810	complement(join(<89478..90155,90228..90293,90370..90804,90906..91475,91555..92085,92228..92311,92529..92906,92988..93820,93918..94241,94435..94528,94652..>95068))	Acanthamoeba castellanii str. Neff	14911743
ACA1_189820	mRNA	ACA1_189820	NW_004457262.1	95425	96955	R	ACA1_189820	complement(join(<95425..95580,95688..95840,95934..96015,96044..96180,96263..96325,96379..96654,96752..>96955))	Acanthamoeba castellanii str. Neff	14911744
ACA1_189830	mRNA	ACA1_189830	NW_004457262.1	97686	98691	D	ACA1_189830	join(<97686..97740,97797..97905,97988..98108,98181..98315,98379..98448,98513..>98691)	Acanthamoeba castellanii str. Neff	14911752
ACA1_189840	mRNA	ACA1_189840	NW_004457262.1	98828	99289	R	ACA1_189840	complement(<98828..>99289)	Acanthamoeba castellanii str. Neff	14911763
ACA1_189850	mRNA	ACA1_189850	NW_004457262.1	99743	100198	R	ACA1_189850	complement(<99743..>100198)	Acanthamoeba castellanii str. Neff	14911764
ACA1_189860	mRNA	ACA1_189860	NW_004457262.1	100833	103502	D	ACA1_189860	join(<100833..101046,101121..101197,101275..101359,101459..101716,101792..101869,101944..102042,102119..102236,102324..102472,102549..102674,102714..102923,103000..103203,103330..>103502)	Acanthamoeba castellanii str. Neff	14911776
ACA1_189870	mRNA	ACA1_189870	NW_004457262.1	104023	105086	D	ACA1_189870	join(<104023..104077,104169..104344,104466..>105086)	Acanthamoeba castellanii str. Neff	14911747
ACA1_189880	mRNA	ACA1_189880	NW_004457262.1	105322	106545	R	ACA1_189880	complement(<105322..>106545)	Acanthamoeba castellanii str. Neff	14911739
ACA1_189890	mRNA	ACA1_189890	NW_004457262.1	106785	107549	R	ACA1_189890	complement(join(<106785..106854,106944..107068,107204..107335,107409..>107549))	Acanthamoeba castellanii str. Neff	14911729
ACA1_190000	mRNA	ACA1_190000	NW_004457262.1	109251	110707	R	ACA1_190000	complement(join(<109251..109418,109592..109631,109672..109789,109874..109988,110057..110095,110156..110334,110401..>110707))	Acanthamoeba castellanii str. Neff	14911746
ACA1_190010	mRNA	ACA1_190010	NW_004457262.1	111180	112634	D	ACA1_190010	join(<111180..111272,111356..111502,111559..111689,111755..111899,111987..112353,112441..>112634)	Acanthamoeba castellanii str. Neff	14911769
ACA1_190020	mRNA	ACA1_190020	NW_004457262.1	113142	113701	D	ACA1_190020	join(<113142..113311,113381..113472,113571..>113701)	Acanthamoeba castellanii str. Neff	14911770
ACA1_190030	mRNA	ACA1_190030	NW_004457262.1	113823	114660	D	ACA1_190030	join(<113823..114265,114330..>114660)	Acanthamoeba castellanii str. Neff	14911760
ACA1_190040	mRNA	ACA1_190040	NW_004457262.1	115193	116739	D	ACA1_190040	join(<115193..115378,115482..115718,115768..115892,115978..116133,116230..116368,116452..116625,116704..>116739)	Acanthamoeba castellanii str. Neff	14911753
ACA1_190050	mRNA	ACA1_190050	NW_004457262.1	117228	118729	D	ACA1_190050	join(<117228..117381,117454..117493,117590..117773,117875..118089,118174..118295,118383..118532,118632..>118729)	Acanthamoeba castellanii str. Neff	14911720
ACA1_190060	mRNA	ACA1_190060	NW_004457262.1	119107	119857	D	ACA1_190060	join(<119107..119230,119301..119404,119497..119740,119811..>119857)	Acanthamoeba castellanii str. Neff	14911745
ACA1_190070	mRNA	ACA1_190070	NW_004457262.1	120061	121874	R	ACA1_190070	complement(join(<120061..120210,120292..120526,120592..120700,120802..120853,120953..121028,121135..121219,121332..121353,121440..121531,121673..>121874))	Acanthamoeba castellanii str. Neff	14911777
ACA1_190080	mRNA	ACA1_190080	NW_004457262.1	122015	123427	R	ACA1_190080	complement(join(<122015..122140,122213..122363,122449..122576,122660..122760,122882..123066,123168..>123427))	Acanthamoeba castellanii str. Neff	14911775
ACA1_190090	mRNA	ACA1_190090	NW_004457262.1	123505	123979	D	ACA1_190090	join(<123505..123592,123664..123702,123772..123876,123954..>123979)	Acanthamoeba castellanii str. Neff	14911773
ACA1_190110	mRNA	ACA1_190110	NW_004457262.1	128173	131498	R	ACA1_190110	complement(join(<128173..128266,128348..128461,128547..128668,128803..128905,128974..129086,129219..129378,129470..129551,129590..129713,129750..129905,130002..130074,130172..130285,130411..130606,130687..130746,130826..130926,131011..131138,131214..131366,131442..>131498))	Acanthamoeba castellanii str. Neff	14911740
ACA1_190120	mRNA	ACA1_190120	NW_004457262.1	131632	133710	R	ACA1_190120	complement(join(<131632..131670,132123..132158,132239..132306,132325..132338,132433..132526,132611..132683,132786..132907,132978..133104,133199..133306,133399..>133710))	Acanthamoeba castellanii str. Neff	14911735
ACA1_190230	mRNA	ACA1_190230	NW_004457262.1	134409	138407	D	ACA1_190230	join(<134409..134441,134636..135088,135163..135561,135584..135683,135702..135749,135825..136016,136111..136218,136315..136452,136537..136668,136758..137136,137219..137398,137465..137562,137638..137820,137923..>138407)	Acanthamoeba castellanii str. Neff	14911728
ACA1_190240	mRNA	ACA1_190240	NW_004457262.1	138555	141393	R	ACA1_190240	complement(join(<138555..139948,140073..140411,140488..140549,140628..141295,141316..>141393))	Acanthamoeba castellanii str. Neff	14911704
ACA1_190250	mRNA	ACA1_190250	NW_004457262.1	142013	144007	D	ACA1_190250	join(<142013..142258,142387..142550,142641..142755,142825..142907,142988..143099,143167..143296,143383..143546,143597..143734,143826..143936,143993..>144007)	Acanthamoeba castellanii str. Neff	14911742
ACA1_190260	mRNA	ACA1_190260	NW_004457262.1	144618	145035	R	ACA1_190260	complement(join(<144618..144712,144786..>145035))	Acanthamoeba castellanii str. Neff	14911734
ACA1_190270	mRNA	ACA1_190270	NW_004457262.1	145601	146198	R	ACA1_190270	complement(join(<145601..145663,145686..145887,145996..>146198))	Acanthamoeba castellanii str. Neff	14911736
ACA1_190280	mRNA	ACA1_190280	NW_004457262.1	146814	148218	D	ACA1_190280	join(<146814..146909,146992..147114,147171..147359,147426..147765,147876..147970,148024..>148218)	Acanthamoeba castellanii str. Neff	14911716
ACA1_190390	mRNA	ACA1_190390	NW_004457262.1	149641	150687	D	ACA1_190390	join(<149641..149912,149972..150087,150164..150339,150405..150484,150558..>150687)	Acanthamoeba castellanii str. Neff	14911768
ACA1_190400	mRNA	ACA1_190400	NW_004457262.1	151276	158210	D	ACA1_190400	join(<151276..152233,152326..153372,153469..153550,153629..153868,153985..155030,155163..155288,155418..155582,155671..155804,155905..156036,156135..156348,156453..156591,156699..156858,156946..157076,157182..157314,157402..157491,157638..>158210)	Acanthamoeba castellanii str. Neff	14911709
ACA1_190510	mRNA	ACA1_190510	NW_004457262.1	158425	159467	R	ACA1_190510	complement(join(<158425..158899,159027..159163,159258..>159467))	Acanthamoeba castellanii str. Neff	14911714
ACA1_190620	mRNA	ACA1_190620	NW_004457262.1	159924	163398	R	ACA1_190620	complement(join(<159924..160340,160409..160647,160769..160882,160997..161142,161266..161335,161416..161530,161618..161733,161847..162117,162264..162442,162570..162714,162830..162994,163116..163206,163286..>163398))	Acanthamoeba castellanii str. Neff	14911748
ACA1_190630	mRNA	ACA1_190630	NW_004457262.1	163636	164749	R	ACA1_190630	complement(join(<163636..163711,163806..163943,164058..164179,164257..164532,164600..>164749))	Acanthamoeba castellanii str. Neff	14911703
ACA1_190640	mRNA	ACA1_190640	NW_004457262.1	165033	166729	D	ACA1_190640	join(<165033..165192,165265..165426,165524..165594,166490..>166729)	Acanthamoeba castellanii str. Neff	14911705
ACA1_190750	mRNA	ACA1_190750	NW_004457262.1	166968	167876	D	ACA1_190750	join(<166968..167102,167192..167383,167486..167572,167829..>167876)	Acanthamoeba castellanii str. Neff	14911708
ACA1_190760	mRNA	ACA1_190760	NW_004457262.1	168803	169639	R	ACA1_190760	complement(join(<168803..168955,169067..>169639))	Acanthamoeba castellanii str. Neff	14911711
ACA1_190770	mRNA	ACA1_190770	NW_004457262.1	169850	173991	R	ACA1_190770	complement(join(<169850..170323,170411..170451,170575..170722,170799..171034,171088..171322,171413..171772,171859..172146,172237..172493,172739..172841,172915..173103,173222..173332,173458..173562,173676..173747,173938..>173991))	Acanthamoeba castellanii str. Neff	14911712
ACA1_190780	mRNA	ACA1_190780	NW_004457262.1	174079	174582	R	ACA1_190780	complement(join(<174079..174188,174300..174372,174529..>174582))	Acanthamoeba castellanii str. Neff	14911717
ACA1_190790	mRNA	ACA1_190790	NW_004457262.1	175228	175537	D	ACA1_190790	<175228..>175537	Acanthamoeba castellanii str. Neff	14911706
ACA1_190910	mRNA	ACA1_190910	NW_004457262.1	180409	182719	R	ACA1_190910	complement(join(<180409..180508,180589..180697,180795..181095,181212..181426,181503..181713,181812..181933,182054..182414,182490..182613,182682..>182719))	Acanthamoeba castellanii str. Neff	14911725
ACA1_190920	mRNA	ACA1_190920	NW_004457262.1	182967	183412	R	ACA1_190920	complement(join(<182967..183197,183254..>183412))	Acanthamoeba castellanii str. Neff	14911727
ACA1_191030	mRNA	ACA1_191030	NW_004457262.1	183562	185414	D	ACA1_191030	join(<183562..183651,183764..183919,184033..184278,184371..184549,184688..184991,185061..185171,185199..>185414)	Acanthamoeba castellanii str. Neff	14911730
ACA1_191140	mRNA	ACA1_191140	NW_004457262.1	185963	186289	R	ACA1_191140	complement(join(<185963..186196,186254..>186289))	Acanthamoeba castellanii str. Neff	14911731
ACA1_191150	mRNA	ACA1_191150	NW_004457262.1	186453	187804	D	ACA1_191150	join(<186453..186494,186560..186629,186686..186723,186736..186806,186875..186959,187032..187164,187232..187273,187650..>187804)	Acanthamoeba castellanii str. Neff	14911733
ACA1_191160	mRNA	ACA1_191160	NW_004457262.1	188118	188741	R	ACA1_191160	complement(join(<188118..188259,188315..188422,188506..>188741))	Acanthamoeba castellanii str. Neff	14911737
ACA1_191170	mRNA	ACA1_191170	NW_004457262.1	188920	189336	D	ACA1_191170	join(<188920..189133,189221..>189336)	Acanthamoeba castellanii str. Neff	14911741
ACA1_191180	mRNA	ACA1_191180	NW_004457262.1	190437	198266	D	ACA1_191180	join(<190437..190517,190619..190783,190896..191030,194496..194584,194649..194740,194828..194887,195007..195172,195276..195369,197798..197853,197945..198018,198097..>198266)	Acanthamoeba castellanii str. Neff	14911702
ACA1_126940	mRNA	ACA1_126940	NW_004457261.1	4805	5628	D	ACA1_126940	join(<4805..5030,5099..5229,5309..5355,5502..>5628)	Acanthamoeba castellanii str. Neff	14911678
ACA1_126950	mRNA	ACA1_126950	NW_004457261.1	5808	6684	R	ACA1_126950	complement(join(<5808..6202,6325..6561,6627..>6684))	Acanthamoeba castellanii str. Neff	14911691
ACA1_126960	mRNA	ACA1_126960	NW_004457261.1	7442	8533	D	ACA1_126960	<7442..>8533	Acanthamoeba castellanii str. Neff	14911686
ACA1_126970	mRNA	ACA1_126970	NW_004457261.1	8816	9655	R	ACA1_126970	complement(<8816..>9655)	Acanthamoeba castellanii str. Neff	14911687
ACA1_126980	mRNA	ACA1_126980	NW_004457261.1	9864	12052	R	ACA1_126980	complement(join(<9864..9917,10211..10509,10732..11303,11584..11777,11990..>12052))	Acanthamoeba castellanii str. Neff	14911696
ACA1_127090	mRNA	ACA1_127090	NW_004457261.1	12395	13241	D	ACA1_127090	join(<12395..12543,12637..12657,12844..12905,12918..13041,13130..>13241)	Acanthamoeba castellanii str. Neff	14911682
ACA1_127200	mRNA	ACA1_127200	NW_004457261.1	13526	14439	R	ACA1_127200	complement(join(<13526..13691,13888..14188,14391..>14439))	Acanthamoeba castellanii str. Neff	14911699
ACA1_127310	mRNA	ACA1_127310	NW_004457261.1	14842	16033	D	ACA1_127310	join(<14842..14952,15093..15190,15280..15358,15470..15726,15805..15870,16015..>16033)	Acanthamoeba castellanii str. Neff	14911679
ACA1_127420	mRNA	ACA1_127420	NW_004457261.1	15996	19224	R	ACA1_127420	complement(join(<15996..16041,16094..16343,16545..16867,17197..17437,17605..17707,18024..18302,18500..18558,18636..18737,19122..>19224))	Acanthamoeba castellanii str. Neff	14911680
ACA1_127430	mRNA	ACA1_127430	NW_004457261.1	19669	19908	R	ACA1_127430	complement(<19669..>19908)	Acanthamoeba castellanii str. Neff	14911681
ACA1_127440	mRNA	ACA1_127440	NW_004457261.1	20114	22400	D	ACA1_127440	join(<20114..20262,20325..20427,20492..20566,20665..20739,20851..20970,21073..21176,21242..21275,21407..21493,21576..21678,21740..21911,21981..22137,22227..>22400)	Acanthamoeba castellanii str. Neff	14911683
ACA1_127450	mRNA	ACA1_127450	NW_004457261.1	22444	23439	R	ACA1_127450	complement(<22444..>23439)	Acanthamoeba castellanii str. Neff	14911684
ACA1_127460	mRNA	ACA1_127460	NW_004457261.1	23787	24147	R	ACA1_127460	complement(join(<23787..23817,23981..>24147))	Acanthamoeba castellanii str. Neff	14911685
ACA1_127470	mRNA	ACA1_127470	NW_004457261.1	24432	25214	R	ACA1_127470	complement(join(<24432..24679,24779..24830,24936..>25214))	Acanthamoeba castellanii str. Neff	14911688
ACA1_127580	mRNA	ACA1_127580	NW_004457261.1	25892	26561	D	ACA1_127580	join(<25892..26131,26151..>26561)	Acanthamoeba castellanii str. Neff	14911689
ACA1_127590	mRNA	ACA1_127590	NW_004457261.1	26703	27713	R	ACA1_127590	complement(<26703..>27713)	Acanthamoeba castellanii str. Neff	14911690
ACA1_127600	mRNA	ACA1_127600	NW_004457261.1	28048	29123	R	ACA1_127600	complement(join(<28048..28078,28357..28570,28679..28730,28848..>29123))	Acanthamoeba castellanii str. Neff	14911692
ACA1_127610	mRNA	ACA1_127610	NW_004457261.1	29424	34447	R	ACA1_127610	complement(join(<29424..31712,31841..31924,32015..>34447))	Acanthamoeba castellanii str. Neff	14911693
ACA1_127620	mRNA	ACA1_127620	NW_004457261.1	35879	37090	D	ACA1_127620	join(<35879..35972,36041..36254,36327..36475,36565..36745,36967..>37090)	Acanthamoeba castellanii str. Neff	14911694
ACA1_127630	mRNA	ACA1_127630	NW_004457261.1	37441	38448	D	ACA1_127630	<37441..>38448	Acanthamoeba castellanii str. Neff	14911695
ACA1_127640	mRNA	ACA1_127640	NW_004457261.1	38846	40613	D	ACA1_127640	join(<38846..39029,39137..39639,39758..39842,39986..40081,40160..40270,40345..>40613)	Acanthamoeba castellanii str. Neff	14911697
ACA1_127650	mRNA	ACA1_127650	NW_004457261.1	40828	41333	D	ACA1_127650	join(<40828..41130,41328..>41333)	Acanthamoeba castellanii str. Neff	14911698
ACA1_127660	mRNA	ACA1_127660	NW_004457261.1	41805	42260	D	ACA1_127660	<41805..>42260	Acanthamoeba castellanii str. Neff	14911700
ACA1_387070	mRNA	ACA1_387070	NW_004457260.1	194	2008	R	ACA1_387070	complement(join(<194..318,365..488,597..712,796..928,999..1058,1160..1306,1403..1513,1606..1689,1764..1883,1961..>2008))	Acanthamoeba castellanii str. Neff	14911643
ACA1_387080	mRNA	ACA1_387080	NW_004457260.1	2162	5077	D	ACA1_387080	join(<2162..2171,2224..2305,2406..2754,2904..3029,3105..3222,3325..3415,3733..3851,3941..4057,4142..4216,4331..4421,4530..4884,4985..>5077)	Acanthamoeba castellanii str. Neff	14911602
ACA1_387090	mRNA	ACA1_387090	NW_004457260.1	5402	7849	R	ACA1_387090	complement(join(<5402..5423,5504..5594,5793..5861,5946..6064,6167..6440,6547..6742,6840..7012,7129..7271,7359..7504,7582..7677,7751..>7849))	Acanthamoeba castellanii str. Neff	14911651
ACA1_387100	mRNA	ACA1_387100	NW_004457260.1	8434	9897	R	ACA1_387100	complement(join(<8434..8579,8665..8832,8937..9036,9113..9216,9304..9402,9538..9704,9839..>9897))	Acanthamoeba castellanii str. Neff	14911662
ACA1_387110	mRNA	ACA1_387110	NW_004457260.1	10424	11107	D	ACA1_387110	join(<10424..10530,10643..10901,10934..10997,11058..>11107)	Acanthamoeba castellanii str. Neff	14911663
ACA1_387220	mRNA	ACA1_387220	NW_004457260.1	11544	12415	R	ACA1_387220	complement(join(<11544..11571,11703..11979,12088..>12415))	Acanthamoeba castellanii str. Neff	14911551
ACA1_387230	mRNA	ACA1_387230	NW_004457260.1	12847	13916	D	ACA1_387230	join(<12847..12906,12983..13321,13389..13521,13559..13693,13771..>13916)	Acanthamoeba castellanii str. Neff	14911615
ACA1_387240	mRNA	ACA1_387240	NW_004457260.1	14170	14966	D	ACA1_387240	join(<14170..14236,14298..14479,14541..>14966)	Acanthamoeba castellanii str. Neff	14911568
ACA1_387250	mRNA	ACA1_387250	NW_004457260.1	15093	20276	R	ACA1_387250	complement(join(<15093..15200,15285..15413,15513..15575,15639..15739,15889..15979,16066..16221,16340..16471,16554..16661,16764..16884,16977..17168,17252..17517,17589..17653,17744..17861,17929..18027,18133..18225,18314..18421,18531..18596,18674..18754,18846..18970,19041..19237,19309..19365,19436..19485,19568..19734,19803..19868,19946..20067,20131..>20276))	Acanthamoeba castellanii str. Neff	14911609
ACA1_387260	mRNA	ACA1_387260	NW_004457260.1	20367	25003	D	ACA1_387260	join(<20367..20721,20954..20980,21070..21550,21593..21754,21835..21920,21991..22810,22903..22994,23045..23292,23483..23550,23620..24038,24159..24252,24266..24278,24383..>25003)	Acanthamoeba castellanii str. Neff	14911581
ACA1_387270	mRNA	ACA1_387270	NW_004457260.1	25140	26687	R	ACA1_387270	complement(join(<25140..25314,25417..25876,25951..26071,26302..26572,26647..>26687))	Acanthamoeba castellanii str. Neff	14911582
ACA1_387280	mRNA	ACA1_387280	NW_004457260.1	27156	30111	D	ACA1_387280	join(<27156..28364,28569..29084,29398..>30111)	Acanthamoeba castellanii str. Neff	14911656
ACA1_387290	mRNA	ACA1_387290	NW_004457260.1	30386	40840	D	ACA1_387290	join(<30386..30448,30512..30595,30851..32635,32723..33343,33367..38117,38213..40631,40649..>40840)	Acanthamoeba castellanii str. Neff	14911661
ACA1_387300	mRNA	ACA1_387300	NW_004457260.1	40981	45897	D	ACA1_387300	<40981..>45897	Acanthamoeba castellanii str. Neff	14911605
ACA1_387310	mRNA	ACA1_387310	NW_004457260.1	46631	48179	R	ACA1_387310	complement(join(<46631..46834,46921..47018,47082..47198,47277..47419,47501..47570,47663..47762,47849..47913,48005..>48179))	Acanthamoeba castellanii str. Neff	14911586
ACA1_387320	mRNA	ACA1_387320	NW_004457260.1	48727	49465	R	ACA1_387320	complement(join(<48727..48819,48886..49008,49100..49119,49300..>49465))	Acanthamoeba castellanii str. Neff	14911645
ACA1_387330	mRNA	ACA1_387330	NW_004457260.1	49822	50163	D	ACA1_387330	<49822..>50163	Acanthamoeba castellanii str. Neff	14911648
ACA1_387340	mRNA	ACA1_387340	NW_004457260.1	50529	51318	R	ACA1_387340	complement(join(<50529..50621,50687..50809,50951..51121,51268..>51318))	Acanthamoeba castellanii str. Neff	14911677
ACA1_387350	mRNA	ACA1_387350	NW_004457260.1	51412	52510	R	ACA1_387350	complement(join(<51412..51425,51471..52390,52458..>52510))	Acanthamoeba castellanii str. Neff	14911560
ACA1_387360	mRNA	ACA1_387360	NW_004457260.1	52886	53243	R	ACA1_387360	complement(join(<52886..52962,53051..>53243))	Acanthamoeba castellanii str. Neff	14911592
ACA1_387470	mRNA	ACA1_387470	NW_004457260.1	53834	54483	D	ACA1_387470	join(<53834..54068,54143..54324,54406..>54483)	Acanthamoeba castellanii str. Neff	14911556
ACA1_387480	mRNA	ACA1_387480	NW_004457260.1	54562	56876	R	ACA1_387480	complement(join(<54562..54572,54679..55065,55147..55516,55587..55675,55797..55878,55959..56031,56319..56370,56446..56550,56674..56748,56834..>56876))	Acanthamoeba castellanii str. Neff	14911593
ACA1_387490	mRNA	ACA1_387490	NW_004457260.1	57226	58707	R	ACA1_387490	complement(join(<57226..57233,57314..57535,57614..57713,57967..58040,58129..58210,58238..58350,58425..58524,58612..>58707))	Acanthamoeba castellanii str. Neff	14911544
ACA1_387600	mRNA	ACA1_387600	NW_004457260.1	58809	62829	R	ACA1_387600	complement(join(<58809..59293,59477..59622,59761..59837,59922..60051,60096..60461,60599..60773,60850..61003,61363..61460,61560..61652,61765..61849,62086..62120,62189..62440,62574..>62829))	Acanthamoeba castellanii str. Neff	14911571
ACA1_387720	mRNA	ACA1_387720	NW_004457260.1	66417	67279	D	ACA1_387720	join(<66417..66557,66616..66945,67034..>67279)	Acanthamoeba castellanii str. Neff	14911545
ACA1_387730	mRNA	ACA1_387730	NW_004457260.1	67451	69525	R	ACA1_387730	complement(join(<67451..67577,67680..67805,67924..67988,68091..68316,68485..68569,68679..68804,68887..69045,69149..69301,69438..>69525))	Acanthamoeba castellanii str. Neff	14911553
ACA1_387740	mRNA	ACA1_387740	NW_004457260.1	69890	72330	R	ACA1_387740	complement(join(<69890..70077,70148..70234,70353..70520,70577..70669,70749..70817,70973..71116,71173..71265,71349..71417,71488..71578,71673..71755,71843..71865,71934..72033,72150..72205,72320..>72330))	Acanthamoeba castellanii str. Neff	14911606
ACA1_387850	mRNA	ACA1_387850	NW_004457260.1	72333	75169	R	ACA1_387850	complement(join(<72333..73295,73384..73595,73658..73813,73950..74136,74216..74379,74474..74683,74860..>75169))	Acanthamoeba castellanii str. Neff	14911652
ACA1_387860	mRNA	ACA1_387860	NW_004457260.1	75399	77399	R	ACA1_387860	complement(<75399..>77399)	Acanthamoeba castellanii str. Neff	14911603
ACA1_387870	mRNA	ACA1_387870	NW_004457260.1	77755	78887	R	ACA1_387870	complement(join(<77755..78105,78327..78506,78571..78747,78789..>78887))	Acanthamoeba castellanii str. Neff	14911650
ACA1_387880	mRNA	ACA1_387880	NW_004457260.1	79139	81265	D	ACA1_387880	join(<79139..80523,80608..80650,80731..80776,80839..80953,81049..>81265)	Acanthamoeba castellanii str. Neff	14911595
ACA1_387890	mRNA	ACA1_387890	NW_004457260.1	81471	84208	D	ACA1_387890	join(<81471..81737,81842..81976,82061..82171,82248..82367,82451..82528,82615..82737,82798..82902,82980..83111,83183..83255,83348..83422,83565..83629,83751..83866,83957..84081,84186..>84208)	Acanthamoeba castellanii str. Neff	14911584
ACA1_387900	mRNA	ACA1_387900	NW_004457260.1	84276	84821	R	ACA1_387900	complement(<84276..>84821)	Acanthamoeba castellanii str. Neff	14911601
ACA1_387910	mRNA	ACA1_387910	NW_004457260.1	85582	88981	R	ACA1_387910	complement(join(<85582..85622,85724..85897,86164..86215,86297..86416,86561..86656,86791..86881,86991..87064,87144..87218,87344..87498,87573..87626,87713..87745,88005..88145,88248..88346,88510..88600,88683..88763,88874..>88981))	Acanthamoeba castellanii str. Neff	14911669
ACA1_387920	mRNA	ACA1_387920	NW_004457260.1	89450	92526	R	ACA1_387920	complement(join(<89450..89550,89623..89721,89813..89921,89936..89942,90147..90296,90389..90495,90576..90686,90784..90851,90926..91061,91143..91199,91284..91375,91571..91640,91730..91805,91906..92038,92148..92237,92306..92344,92391..>92526))	Acanthamoeba castellanii str. Neff	14911626
ACA1_387930	mRNA	ACA1_387930	NW_004457260.1	93131	93763	D	ACA1_387930	join(<93131..93244,93377..93545,93645..>93763)	Acanthamoeba castellanii str. Neff	14911576
ACA1_387940	mRNA	ACA1_387940	NW_004457260.1	94081	94310	D	ACA1_387940	<94081..>94310	Acanthamoeba castellanii str. Neff	14911562
ACA1_388050	mRNA	ACA1_388050	NW_004457260.1	94554	95259	R	ACA1_388050	complement(join(<94554..94625,94708..94764,94847..94938,95032..95101,95191..>95259))	Acanthamoeba castellanii str. Neff	14911546
ACA1_388160	mRNA	ACA1_388160	NW_004457260.1	96738	97765	D	ACA1_388160	join(<96738..96886,97044..97168,97291..97374,97480..97631,97721..>97765)	Acanthamoeba castellanii str. Neff	14911573
ACA1_388170	mRNA	ACA1_388170	NW_004457260.1	97942	98667	D	ACA1_388170	join(<97942..98031,98086..98127,98190..98276,98340..98441,98467..>98667)	Acanthamoeba castellanii str. Neff	14911591
ACA1_388180	mRNA	ACA1_388180	NW_004457260.1	98761	99728	D	ACA1_388180	join(<98761..98997,99012..>99728)	Acanthamoeba castellanii str. Neff	14911613
ACA1_388190	mRNA	ACA1_388190	NW_004457260.1	101251	104150	D	ACA1_388190	join(<101251..101421,101513..102041,102215..102265,102406..102635,102788..102871,103628..103852,103938..>104150)	Acanthamoeba castellanii str. Neff	14911597
ACA1_388300	mRNA	ACA1_388300	NW_004457260.1	104163	106345	R	ACA1_388300	complement(join(<104163..104528,104614..104676,104786..104885,104967..105162,105237..105362,105458..105515,105631..105765,105867..105939,106071..>106345))	Acanthamoeba castellanii str. Neff	14911627
ACA1_388310	mRNA	ACA1_388310	NW_004457260.1	106613	107680	R	ACA1_388310	complement(join(<106613..106799,106914..107072,107188..107440,107590..>107680))	Acanthamoeba castellanii str. Neff	14911631
ACA1_388420	mRNA	ACA1_388420	NW_004457260.1	108542	108865	D	ACA1_388420	<108542..>108865	Acanthamoeba castellanii str. Neff	14911619
ACA1_388430	mRNA	ACA1_388430	NW_004457260.1	108955	109581	R	ACA1_388430	complement(<108955..>109581)	Acanthamoeba castellanii str. Neff	14911611
ACA1_388440	mRNA	ACA1_388440	NW_004457260.1	110588	112199	D	ACA1_388440	join(<110588..110630,110703..110838,110966..111037,111114..111154,111327..111412,111522..111608,111671..111818,111931..112014,112105..>112199)	Acanthamoeba castellanii str. Neff	14911608
ACA1_388450	mRNA	ACA1_388450	NW_004457260.1	112568	119536	D	ACA1_388450	join(<112568..112625,112691..112802,112919..112979,113061..113180,113324..113638,113749..113933,114213..114562,114645..114883,114968..115099,115180..115366,115429..115576,115694..115938,116011..116393,116476..116572,116642..116703,116809..117008,117091..117798,117897..118204,118267..118719,118816..119021,119120..>119536)	Acanthamoeba castellanii str. Neff	14911644
ACA1_388460	mRNA	ACA1_388460	NW_004457260.1	119660	121716	R	ACA1_388460	complement(join(<119660..119755,119850..119961,120065..120226,120357..120446,120534..120610,120731..120799,120882..120925,121007..121093,121206..121278,121381..121485,121630..>121716))	Acanthamoeba castellanii str. Neff	14911658
ACA1_388470	mRNA	ACA1_388470	NW_004457260.1	121785	122270	R	ACA1_388470	complement(join(<121785..121951,122012..>122270))	Acanthamoeba castellanii str. Neff	14911567
ACA1_388480	mRNA	ACA1_388480	NW_004457260.1	122490	123771	R	ACA1_388480	complement(join(<122490..122589,122653..122760,122881..123002,123088..123154,123232..123458,123529..123597,123718..>123771))	Acanthamoeba castellanii str. Neff	14911633
ACA1_388490	mRNA	ACA1_388490	NW_004457260.1	124234	127091	D	ACA1_388490	join(<124234..124320,124453..124598,124702..125033,125172..125276,125381..125549,125623..125693,125769..125909,126001..126124,126291..126364,126457..126565,126627..126718,126807..126913,127002..>127091)	Acanthamoeba castellanii str. Neff	14911653
ACA1_388500	mRNA	ACA1_388500	NW_004457260.1	127230	129399	R	ACA1_388500	complement(join(<127230..127478,127495..127779,127863..128019,128097..128212,128333..128416,128694..128786,128889..128970,129044..>129399))	Acanthamoeba castellanii str. Neff	14911672
ACA1_388510	mRNA	ACA1_388510	NW_004457260.1	129823	134150	D	ACA1_388510	join(<129823..129861,129935..130291,130358..130964,131063..131707,131773..>134150)	Acanthamoeba castellanii str. Neff	14911575
ACA1_388520	mRNA	ACA1_388520	NW_004457260.1	134258	135119	D	ACA1_388520	join(<134258..134414,134543..134647,134742..134882,134962..>135119)	Acanthamoeba castellanii str. Neff	14911561
ACA1_388530	mRNA	ACA1_388530	NW_004457260.1	135306	136203	R	ACA1_388530	complement(join(<135306..135524,135651..135702,135775..135856,136032..>136203))	Acanthamoeba castellanii str. Neff	14911649
ACA1_388540	mRNA	ACA1_388540	NW_004457260.1	136489	138550	D	ACA1_388540	join(<136489..136601,136700..136801,136877..136980,137087..137202,137555..137670,137743..137858,137951..138135,138247..138350,138424..>138550)	Acanthamoeba castellanii str. Neff	14911579
ACA1_388550	mRNA	ACA1_388550	NW_004457260.1	138744	139372	D	ACA1_388550	join(<138744..139278,139362..>139372)	Acanthamoeba castellanii str. Neff	14911673
ACA1_388660	mRNA	ACA1_388660	NW_004457260.1	140790	143523	D	ACA1_388660	join(<140790..140947,141070..141196,141367..141630,141811..141868,141938..142081,142223..142437,142575..142731,142859..>143523)	Acanthamoeba castellanii str. Neff	14911585
ACA1_388670	mRNA	ACA1_388670	NW_004457260.1	143806	144240	D	ACA1_388670	<143806..>144240	Acanthamoeba castellanii str. Neff	14911549
ACA1_388680	mRNA	ACA1_388680	NW_004457260.1	144378	147842	R	ACA1_388680	complement(join(<144378..144444,144543..144628,144781..144955,145050..145110,145185..145323,145401..145462,145565..145646,145724..145807,145989..146059,146130..146205,146268..146351,146438..146706,146803..146953,147053..147129,147211..147322,147447..147489,147655..>147842))	Acanthamoeba castellanii str. Neff	14911634
ACA1_388690	mRNA	ACA1_388690	NW_004457260.1	148433	149048	D	ACA1_388690	join(<148433..148660,148721..148853,148951..>149048)	Acanthamoeba castellanii str. Neff	14911614
ACA1_388700	mRNA	ACA1_388700	NW_004457260.1	149223	152196	R	ACA1_388700	complement(join(<149223..149351,149436..149551,149659..149739,149813..149974,150059..150143,150231..150326,150454..150528,150658..150732,150795..150914,151085..151184,151295..151371,151450..151520,151585..151769,151865..151985,152112..>152196))	Acanthamoeba castellanii str. Neff	14911607
ACA1_388710	mRNA	ACA1_388710	NW_004457260.1	152508	153200	R	ACA1_388710	complement(join(<152508..152584,152667..152776,152867..152939,153011..>153200))	Acanthamoeba castellanii str. Neff	14911612
ACA1_388720	mRNA	ACA1_388720	NW_004457260.1	153511	154103	R	ACA1_388720	complement(join(<153511..153693,153756..153913,153977..>154103))	Acanthamoeba castellanii str. Neff	14911654
ACA1_388730	mRNA	ACA1_388730	NW_004457260.1	154721	156646	R	ACA1_388730	complement(join(<154721..154968,154992..155475,155547..156344,156403..156506,156577..>156646))	Acanthamoeba castellanii str. Neff	14911646
ACA1_388750	mRNA	ACA1_388750	NW_004457260.1	158268	159380	D	ACA1_388750	join(<158268..158298,158437..>159380)	Acanthamoeba castellanii str. Neff	14911638
ACA1_388760	mRNA	ACA1_388760	NW_004457260.1	159570	160739	D	ACA1_388760	join(<159570..159727,159781..159870,159945..160031,160105..160383,160458..160578,160662..>160739)	Acanthamoeba castellanii str. Neff	14911655
ACA1_388770	mRNA	ACA1_388770	NW_004457260.1	160949	166316	D	ACA1_388770	join(<160949..161104,161242..161562,161629..161739,161835..161958,162026..162182,162288..162475,162550..162667,162770..163184,163276..163415,163489..163758,163835..164111,164197..164346,164441..164551,164660..164861,164949..165190,165278..165376,165468..165613,165677..165843,165910..166153,166262..>166316)	Acanthamoeba castellanii str. Neff	14911552
ACA1_388780	mRNA	ACA1_388780	NW_004457260.1	166941	171883	D	ACA1_388780	join(<166941..167171,167367..167553,167754..167869,168022..168080,168181..168335,168439..168531,168626..168685,168805..168902,169002..169079,169103..169253,169333..169440,169529..169656,169731..169874,169989..170118,170228..170337,170428..170483,170574..170746,170877..171112,171266..171364,171458..171603,171679..171824,171873..>171883)	Acanthamoeba castellanii str. Neff	14911565
ACA1_388890	mRNA	ACA1_388890	NW_004457260.1	172713	174015	D	ACA1_388890	join(<172713..173078,173093..173226,173321..173509,173763..173899,173996..>174015)	Acanthamoeba castellanii str. Neff	14911594
ACA1_389000	mRNA	ACA1_389000	NW_004457260.1	174499	175376	D	ACA1_389000	join(<174499..174565,174684..174723,174913..175296,175331..>175376)	Acanthamoeba castellanii str. Neff	14911620
ACA1_389010	mRNA	ACA1_389010	NW_004457260.1	175657	181630	D	ACA1_389010	join(<175657..175809,175897..176102,176193..176356,176436..176641,176778..176996,177050..177178,177282..178362,178444..178676,178743..178876,178971..179251,179336..179437,179551..179673,179765..179867,179939..179994,180128..180262,180399..180494,180574..180660,180759..180879,180976..>181630)	Acanthamoeba castellanii str. Neff	14911542
ACA1_389020	mRNA	ACA1_389020	NW_004457260.1	181977	182614	R	ACA1_389020	complement(join(<181977..182271,182352..>182614))	Acanthamoeba castellanii str. Neff	14911622
ACA1_389030	mRNA	ACA1_389030	NW_004457260.1	183060	183754	D	ACA1_389030	join(<183060..183092,183170..183441,183556..>183754)	Acanthamoeba castellanii str. Neff	14911623
ACA1_389040	mRNA	ACA1_389040	NW_004457260.1	184935	185273	D	ACA1_389040	<184935..>185273	Acanthamoeba castellanii str. Neff	14911668
ACA1_389050	mRNA	ACA1_389050	NW_004457260.1	185282	185965	R	ACA1_389050	complement(join(<185282..185340,185643..185833,185913..>185965))	Acanthamoeba castellanii str. Neff	14911541
ACA1_389060	mRNA	ACA1_389060	NW_004457260.1	187338	188818	D	ACA1_389060	join(<187338..187358,187549..187644,187696..187923,188003..188080,188176..188284,188431..188510,188585..>188818)	Acanthamoeba castellanii str. Neff	14911548
ACA1_389070	mRNA	ACA1_389070	NW_004457260.1	189317	190410	R	ACA1_389070	complement(join(<189317..189736,189818..190057,190128..190154,190249..>190410))	Acanthamoeba castellanii str. Neff	14911580
ACA1_389080	mRNA	ACA1_389080	NW_004457260.1	190569	193464	R	ACA1_389080	complement(join(<190569..190789,190860..191415,191540..191633,191723..191796,191898..191985,192064..192146,192246..192328,192415..192498,192642..192798,192909..193049,193151..193209,193335..>193464))	Acanthamoeba castellanii str. Neff	14911664
ACA1_389090	mRNA	ACA1_389090	NW_004457260.1	193629	194599	D	ACA1_389090	join(<193629..193829,194015..>194599)	Acanthamoeba castellanii str. Neff	14911637
ACA1_389100	mRNA	ACA1_389100	NW_004457260.1	195055	197152	D	ACA1_389100	join(<195055..195409,195687..195823,196013..196540,196626..196746,197031..>197152)	Acanthamoeba castellanii str. Neff	14911604
ACA1_389110	mRNA	ACA1_389110	NW_004457260.1	197375	198864	D	ACA1_389110	join(<197375..197830,197924..198080,198169..198465,198569..198636,198655..>198864)	Acanthamoeba castellanii str. Neff	14911564
ACA1_389120	mRNA	ACA1_389120	NW_004457260.1	200010	206469	D	ACA1_389120	join(<200010..200090,200299..200355,200446..200632,200757..200829,200916..201021,201116..201278,201430..201717,201798..202441,202530..202649,202775..202929,203009..203103,203181..203325,203429..205153,205246..205827,205932..>206469)	Acanthamoeba castellanii str. Neff	14911640
ACA1_389130	mRNA	ACA1_389130	NW_004457260.1	206802	209458	D	ACA1_389130	join(<206802..206949,207061..207141,207242..207304,207389..207510,207672..207886,208016..208151,208249..208431,208519..208635,208730..208785,208859..209008,209089..209238,209314..>209458)	Acanthamoeba castellanii str. Neff	14911642
ACA1_389140	mRNA	ACA1_389140	NW_004457260.1	209899	210987	R	ACA1_389140	complement(join(<209899..210386,210570..>210987))	Acanthamoeba castellanii str. Neff	14911670
ACA1_389150	mRNA	ACA1_389150	NW_004457260.1	212185	213526	D	ACA1_389150	join(<212185..212333,212452..212916,212988..213468,213521..>213526)	Acanthamoeba castellanii str. Neff	14911625
ACA1_389160	mRNA	ACA1_389160	NW_004457260.1	213910	215146	D	ACA1_389160	join(<213910..213941,214162..214520,214650..>215146)	Acanthamoeba castellanii str. Neff	14911588
ACA1_389170	mRNA	ACA1_389170	NW_004457260.1	215874	218325	D	ACA1_389170	join(<215874..216010,216085..216170,216300..216410,216501..216793,216861..216964,217089..217415,217486..217550,217640..217738,217880..217971,218029..218136,218305..>218325)	Acanthamoeba castellanii str. Neff	14911676
ACA1_389180	mRNA	ACA1_389180	NW_004457260.1	218661	220790	D	ACA1_389180	join(<218661..218846,218922..218997,219072..219319,219481..219587,219676..219751,219966..220082,220164..220295,220374..>220790)	Acanthamoeba castellanii str. Neff	14911630
ACA1_389290	mRNA	ACA1_389290	NW_004457260.1	222514	225627	D	ACA1_389290	join(<222514..222709,222804..222975,223039..223123,223197..223472,223551..223883,223961..224114,224196..224281,224378..224454,224532..224668,224730..225093,225188..225352,225486..>225627)	Acanthamoeba castellanii str. Neff	14911570
ACA1_389300	mRNA	ACA1_389300	NW_004457260.1	225783	226235	R	ACA1_389300	complement(join(<225783..225821,225905..225997,226095..>226235))	Acanthamoeba castellanii str. Neff	14911617
ACA1_389310	mRNA	ACA1_389310	NW_004457260.1	226504	227937	R	ACA1_389310	complement(<226504..>227937)	Acanthamoeba castellanii str. Neff	14911557
ACA1_389320	mRNA	ACA1_389320	NW_004457260.1	228419	230390	D	ACA1_389320	join(<228419..228509,228576..228649,228736..229178,229257..229400,229524..229801,229876..230003,230077..230131,230200..>230390)	Acanthamoeba castellanii str. Neff	14911596
ACA1_389330	mRNA	ACA1_389330	NW_004457260.1	230655	232630	D	ACA1_389330	join(<230655..231011,231145..231240,231375..231518,231620..231682,231816..231869,231946..232046,232141..232236,232366..>232630)	Acanthamoeba castellanii str. Neff	14911636
ACA1_389340	mRNA	ACA1_389340	NW_004457260.1	233446	235112	D	ACA1_389340	join(<233446..233530,233601..233683,233750..233800,233976..234125,234205..234414,234529..234639,234738..>235112)	Acanthamoeba castellanii str. Neff	14911632
ACA1_389350	mRNA	ACA1_389350	NW_004457260.1	235409	236692	D	ACA1_389350	join(<235409..235481,235572..235616,235729..235851,235941..236011,236135..236464,236543..>236692)	Acanthamoeba castellanii str. Neff	14911635
ACA1_389360	mRNA	ACA1_389360	NW_004457260.1	236737	238387	R	ACA1_389360	complement(join(<236737..236958,237092..237202,237314..237523,237604..237831,237973..238098,238132..238187,238303..>238387))	Acanthamoeba castellanii str. Neff	14911578
ACA1_389370	mRNA	ACA1_389370	NW_004457260.1	240134	240487	D	ACA1_389370	<240134..>240487	Acanthamoeba castellanii str. Neff	14911657
ACA1_389380	mRNA	ACA1_389380	NW_004457260.1	240701	242045	R	ACA1_389380	complement(join(<240701..241511,241616..241833,241944..>242045))	Acanthamoeba castellanii str. Neff	14911629
ACA1_389390	mRNA	ACA1_389390	NW_004457260.1	242444	243080	D	ACA1_389390	join(<242444..242470,242503..242644,242878..>243080)	Acanthamoeba castellanii str. Neff	14911616
ACA1_389400	mRNA	ACA1_389400	NW_004457260.1	243336	245427	D	ACA1_389400	join(<243336..243487,243606..243781,243886..243972,244055..244158,244249..244671,244845..245166,245252..>245427)	Acanthamoeba castellanii str. Neff	14911554
ACA1_389410	mRNA	ACA1_389410	NW_004457260.1	245602	246276	R	ACA1_389410	complement(<245602..>246276)	Acanthamoeba castellanii str. Neff	14911583
ACA1_389420	mRNA	ACA1_389420	NW_004457260.1	246745	251978	R	ACA1_389420	complement(join(<246745..246881,246994..247114,247185..247369,247453..247714,247811..247915,248058..248138,248252..248349,248505..248722,248855..248949,249061..249185,249284..249485,249568..249657,249763..250071,250141..250201,250332..250508,250545..250600,250705..250797,250975..251289,251417..251503,251635..251754,251889..>251978))	Acanthamoeba castellanii str. Neff	14911671
ACA1_389430	mRNA	ACA1_389430	NW_004457260.1	252176	253879	D	ACA1_389430	join(<252176..252204,252336..252384,252485..252524,252561..252589,252680..253085,253192..253247,253279..253302,253385..253676,253758..>253879)	Acanthamoeba castellanii str. Neff	14911647
ACA1_389440	mRNA	ACA1_389440	NW_004457260.1	254161	255504	D	ACA1_389440	join(<254161..254174,254297..254378,254466..254660,254803..254910,255035..255199,255307..>255504)	Acanthamoeba castellanii str. Neff	14911563
ACA1_389450	mRNA	ACA1_389450	NW_004457260.1	255732	259398	D	ACA1_389450	join(<255732..255897,256009..256217,256327..256825,256895..257139,257236..257387,257472..257586,257653..257774,257862..258084,258150..258268,258365..258551,258698..258831,258906..259021,259118..259230,259309..>259398)	Acanthamoeba castellanii str. Neff	14911587
ACA1_389460	mRNA	ACA1_389460	NW_004457260.1	259500	261000	R	ACA1_389460	complement(join(<259500..259766,259857..259992,260109..260198,260291..260501,260586..260868,260950..>261000))	Acanthamoeba castellanii str. Neff	14911590
ACA1_389470	mRNA	ACA1_389470	NW_004457260.1	261407	264410	D	ACA1_389470	join(<261407..261496,261597..261706,261792..261964,262054..262203,262392..262447,262658..263141,263219..263337,263412..263512,263612..263799,263902..>264410)	Acanthamoeba castellanii str. Neff	14911555
ACA1_389480	mRNA	ACA1_389480	NW_004457260.1	264547	265614	D	ACA1_389480	join(<264547..265013,265091..265304,265405..>265614)	Acanthamoeba castellanii str. Neff	14911610
ACA1_389490	mRNA	ACA1_389490	NW_004457260.1	266319	268347	R	ACA1_389490	complement(join(<266319..266985,267070..267243,267338..267598,267688..267751,267853..268098,268239..>268347))	Acanthamoeba castellanii str. Neff	14911574
ACA1_389500	mRNA	ACA1_389500	NW_004457260.1	268620	269287	D	ACA1_389500	join(<268620..268798,268978..>269287)	Acanthamoeba castellanii str. Neff	14911667
ACA1_389510	mRNA	ACA1_389510	NW_004457260.1	269551	270747	D	ACA1_389510	join(<269551..269726,269929..269998,270111..270167,270392..270517,270640..>270747)	Acanthamoeba castellanii str. Neff	14911641
ACA1_389520	mRNA	ACA1_389520	NW_004457260.1	271532	272570	D	ACA1_389520	join(<271532..271597,271683..271825,271924..272050,272154..272250,272440..>272570)	Acanthamoeba castellanii str. Neff	14911559
ACA1_389530	mRNA	ACA1_389530	NW_004457260.1	273512	277682	R	ACA1_389530	complement(join(<273512..273713,273846..273891,274021..274159,275046..275232,275368..275413,275546..275684,275789..275869,276019..276147,276253..276330,276439..276491,276592..276689,276797..277023,277144..277235,277318..277402,277554..>277682))	Acanthamoeba castellanii str. Neff	14911618
ACA1_389540	mRNA	ACA1_389540	NW_004457260.1	277827	279805	R	ACA1_389540	complement(join(<277827..278038,278155..278266,278367..278495,278576..278669,278800..278858,279176..279284,279435..279548,279711..>279805))	Acanthamoeba castellanii str. Neff	14911639
ACA1_389550	mRNA	ACA1_389550	NW_004457260.1	280102	282953	D	ACA1_389550	join(<280102..280137,280227..280440,280712..280806,280969..281078,281167..281310,281375..281485,281585..281921,282002..282088,282163..282349,282504..282707,282742..>282953)	Acanthamoeba castellanii str. Neff	14911577
ACA1_389560	mRNA	ACA1_389560	NW_004457260.1	283156	286997	R	ACA1_389560	complement(join(<283156..283397,283512..283643,283743..283839,283996..284157,284275..284400,284514..284585,284686..284874,284991..285157,285303..285572,285651..285792,285917..286127,286199..286307,286405..286483,286558..286668,286812..>286997))	Acanthamoeba castellanii str. Neff	14911569
ACA1_389570	mRNA	ACA1_389570	NW_004457260.1	287303	287597	D	ACA1_389570	join(<287303..287444,287458..>287597)	Acanthamoeba castellanii str. Neff	14911566
ACA1_389580	mRNA	ACA1_389580	NW_004457260.1	287703	288146	D	ACA1_389580	<287703..>288146	Acanthamoeba castellanii str. Neff	14911675
ACA1_389590	mRNA	ACA1_389590	NW_004457260.1	288225	289431	R	ACA1_389590	complement(join(<288225..288382,288474..288577,288646..288760,288940..289053,289164..>289431))	Acanthamoeba castellanii str. Neff	14911598
ACA1_389600	mRNA	ACA1_389600	NW_004457260.1	289945	292084	D	ACA1_389600	join(<289945..290022,290094..290222,290366..290415,290441..290570,290859..291027,291148..291252,291352..291395,291572..291622,291698..291714,291808..>292084)	Acanthamoeba castellanii str. Neff	14911589
ACA1_389610	mRNA	ACA1_389610	NW_004457260.1	292356	293353	R	ACA1_389610	complement(join(<292356..292583,292620..292979,293094..293168,293270..>293353))	Acanthamoeba castellanii str. Neff	14911621
ACA1_389620	mRNA	ACA1_389620	NW_004457260.1	294116	297888	D	ACA1_389620	join(<294116..294302,294354..294871,294965..295099,295122..295209,295291..295401,295471..295596,295703..295772,295873..295979,296069..296129,296198..296445,296529..296731,296883..296957,297035..297112,297255..297330,297419..297476,297561..297622,297722..>297888)	Acanthamoeba castellanii str. Neff	14911659
ACA1_389630	mRNA	ACA1_389630	NW_004457260.1	297945	299932	D	ACA1_389630	join(<297945..298044,298128..298192,298328..298414,298664..299005,299099..299186,299340..299426,299506..299636,299753..>299932)	Acanthamoeba castellanii str. Neff	14911674
ACA1_389640	mRNA	ACA1_389640	NW_004457260.1	300044	300748	D	ACA1_389640	join(<300044..300357,300553..>300748)	Acanthamoeba castellanii str. Neff	14911624
ACA1_389650	mRNA	ACA1_389650	NW_004457260.1	300842	301774	D	ACA1_389650	join(<300842..300920,301176..301444,301538..>301774)	Acanthamoeba castellanii str. Neff	14911600
ACA1_389660	mRNA	ACA1_389660	NW_004457260.1	301837	302358	D	ACA1_389660	join(<301837..301887,301965..302093,302179..>302358)	Acanthamoeba castellanii str. Neff	14911550
ACA1_389670	mRNA	ACA1_389670	NW_004457260.1	302524	302813	D	ACA1_389670	join(<302524..302568,302643..>302813)	Acanthamoeba castellanii str. Neff	14911660
ACA1_389680	mRNA	ACA1_389680	NW_004457260.1	304516	308601	R	ACA1_389680	complement(join(<304516..304756,304870..305012,305083..305211,305300..305506,305642..305805,305972..306210,306354..306610,306708..306898,306962..307088,307200..307360,307458..307652,307765..307865,307963..308127,308227..308285,308365..308430,308548..>308601))	Acanthamoeba castellanii str. Neff	14911572
ACA1_389690	mRNA	ACA1_389690	NW_004457260.1	308783	312309	R	ACA1_389690	complement(join(<308783..308899,308994..309098,309196..309282,309377..309562,309675..309804,309892..310079,310228..310399,310515..310900,311014..311132,311237..311539,311670..>312309))	Acanthamoeba castellanii str. Neff	14911666
ACA1_389700	mRNA	ACA1_389700	NW_004457260.1	313017	314398	D	ACA1_389700	join(<313017..313334,313608..313672,313763..313916,313999..314142,314267..>314398)	Acanthamoeba castellanii str. Neff	14911547
ACA1_389710	mRNA	ACA1_389710	NW_004457260.1	314465	314921	D	ACA1_389710	join(<314465..314595,314834..>314921)	Acanthamoeba castellanii str. Neff	14911558
ACA1_389720	mRNA	ACA1_389720	NW_004457260.1	315203	316363	R	ACA1_389720	complement(join(<315203..315738,315816..315926,315988..316076,316161..>316363))	Acanthamoeba castellanii str. Neff	14911599
ACA1_389730	mRNA	ACA1_389730	NW_004457260.1	319528	319848	R	ACA1_389730	complement(<319528..>319848)	Acanthamoeba castellanii str. Neff	14911665
ACA1_351140	mRNA	ACA1_351140	NW_004457259.1	640	1588	D	ACA1_351140	join(<640..796,898..1295,1361..>1588)	Acanthamoeba castellanii str. Neff	14911522
ACA1_351150	mRNA	ACA1_351150	NW_004457259.1	1652	3379	R	ACA1_351150	complement(join(<1652..1912,2010..2246,2337..2438,2495..2564,2646..2759,2839..2912,2995..3076,3155..3214,3291..>3379))	Acanthamoeba castellanii str. Neff	14911523
ACA1_351270	mRNA	ACA1_351270	NW_004457259.1	10171	10746	R	ACA1_351270	complement(join(<10171..10322,10433..10507,10632..>10746))	Acanthamoeba castellanii str. Neff	14911524
ACA1_351280	mRNA	ACA1_351280	NW_004457259.1	11007	11755	R	ACA1_351280	complement(join(<11007..11618,11696..>11755))	Acanthamoeba castellanii str. Neff	14911528
ACA1_351290	mRNA	ACA1_351290	NW_004457259.1	12280	12879	D	ACA1_351290	join(<12280..12465,12534..12659,12736..>12879)	Acanthamoeba castellanii str. Neff	14911536
ACA1_351300	mRNA	ACA1_351300	NW_004457259.1	12957	13545	R	ACA1_351300	complement(join(<12957..13414,13476..>13545))	Acanthamoeba castellanii str. Neff	14911519
ACA1_351310	mRNA	ACA1_351310	NW_004457259.1	13893	15289	D	ACA1_351310	join(<13893..14000,14074..14355,14402..14547,14612..14820,14835..>15289)	Acanthamoeba castellanii str. Neff	14911525
ACA1_351320	mRNA	ACA1_351320	NW_004457259.1	15434	16203	R	ACA1_351320	complement(join(<15434..15657,15767..15882,15977..>16203))	Acanthamoeba castellanii str. Neff	14911529
ACA1_351330	mRNA	ACA1_351330	NW_004457259.1	16332	17056	R	ACA1_351330	complement(join(<16332..16770,16860..>17056))	Acanthamoeba castellanii str. Neff	14911520
ACA1_351440	mRNA	ACA1_351440	NW_004457259.1	18346	19713	R	ACA1_351440	complement(join(<18346..18490,18574..18861,19032..19365,19455..>19713))	Acanthamoeba castellanii str. Neff	14911527
ACA1_351450	mRNA	ACA1_351450	NW_004457259.1	20282	23099	R	ACA1_351450	complement(join(<20282..20385,20457..20638,21174..21273,21338..21414,21491..21567,21685..22048,22155..22266,22350..22402,22484..22576,22656..22708,22770..22949,23016..>23099))	Acanthamoeba castellanii str. Neff	14911530
ACA1_351660	mRNA	ACA1_351660	NW_004457259.1	25430	26619	R	ACA1_351660	complement(join(<25430..25930,26001..26090,26162..26296,26391..26471,26575..>26619))	Acanthamoeba castellanii str. Neff	14911533
ACA1_351770	mRNA	ACA1_351770	NW_004457259.1	27236	27615	D	ACA1_351770	join(<27236..27300,27311..27390,27464..>27615)	Acanthamoeba castellanii str. Neff	14911538
ACA1_351780	mRNA	ACA1_351780	NW_004457259.1	27805	29003	D	ACA1_351780	join(<27805..28344,28415..28530,28640..>29003)	Acanthamoeba castellanii str. Neff	14911535
ACA1_351790	mRNA	ACA1_351790	NW_004457259.1	29382	29862	D	ACA1_351790	join(<29382..29625,29675..>29862)	Acanthamoeba castellanii str. Neff	14911537
ACA1_351900	mRNA	ACA1_351900	NW_004457259.1	31605	32429	D	ACA1_351900	join(<31605..32185,32294..>32429)	Acanthamoeba castellanii str. Neff	14911532
ACA1_351910	mRNA	ACA1_351910	NW_004457259.1	32534	33550	R	ACA1_351910	complement(join(<32534..32808,32884..33067,33149..>33550))	Acanthamoeba castellanii str. Neff	14911540
ACA1_351920	mRNA	ACA1_351920	NW_004457259.1	33829	36714	D	ACA1_351920	join(<33829..33904,33968..34008,34083..34157,34273..34459,34534..34706,34795..35007,35077..35540,35633..35937,36026..>36714)	Acanthamoeba castellanii str. Neff	14911531
ACA1_351930	mRNA	ACA1_351930	NW_004457259.1	36884	37578	R	ACA1_351930	complement(join(<36884..36906,37129..37199,37295..>37578))	Acanthamoeba castellanii str. Neff	14911526
ACA1_352040	mRNA	ACA1_352040	NW_004457259.1	38506	41267	R	ACA1_352040	complement(join(<38506..38539,38599..38715,38795..38909,39019..39219,39335..39382,39499..39609,39687..39797,39881..40004,40090..40223,40331..40439,40509..40582,40661..40769,40842..>41267))	Acanthamoeba castellanii str. Neff	14911534
ACA1_352050	mRNA	ACA1_352050	NW_004457259.1	41767	43259	D	ACA1_352050	join(<41767..41887,41956..41994,42059..42117,42194..42279,42367..42418,42478..42556,42646..42692,42777..42959,43036..43109,43193..>43259)	Acanthamoeba castellanii str. Neff	14911521
ACA1_327700	mRNA	ACA1_327700	NW_004457258.1	5779	6546	R	ACA1_327700	complement(join(<5779..5970,6085..6187,6433..>6546))	Acanthamoeba castellanii str. Neff	14911518
ACA1_299580	mRNA	ACA1_299580	NW_004457257.1	6	1536	D	ACA1_299580	join(<6..186,256..741,811..1016,1126..>1536)	Acanthamoeba castellanii str. Neff	14911515
ACA1_299690	mRNA	ACA1_299690	NW_004457257.1	5819	6608	D	ACA1_299690	join(<5819..6068,6095..6182,6554..>6608)	Acanthamoeba castellanii str. Neff	14911516
ACA1_299800	mRNA	ACA1_299800	NW_004457257.1	10028	10846	D	ACA1_299800	join(<10028..10092,10189..10337,10719..>10846)	Acanthamoeba castellanii str. Neff	14911517
ACA1_299810	mRNA	ACA1_299810	NW_004457257.1	11233	11840	D	ACA1_299810	join(<11233..11487,11571..>11840)	Acanthamoeba castellanii str. Neff	14911513
ACA1_299820	mRNA	ACA1_299820	NW_004457257.1	11927	14362	D	ACA1_299820	join(<11927..12039,12107..12155,12230..12355,12462..12533,12685..12744,12858..12977,13088..13288,13376..13536,13683..13794,13915..14014,14092..14207,14318..>14362)	Acanthamoeba castellanii str. Neff	14911512
ACA1_299830	mRNA	ACA1_299830	NW_004457257.1	14470	14673	R	ACA1_299830	complement(<14470..>14673)	Acanthamoeba castellanii str. Neff	14911514
ACA1_334640	mRNA	ACA1_334640	NW_004457256.1	178	850	D	ACA1_334640	join(<178..245,327..488,575..660,723..>850)	Acanthamoeba castellanii str. Neff	14911510
ACA1_334650	mRNA	ACA1_334650	NW_004457256.1	1010	2405	D	ACA1_334650	join(<1010..1053,1123..1228,1299..1392,1452..1559,1627..1705,1776..1918,1996..>2405)	Acanthamoeba castellanii str. Neff	14911506
ACA1_334660	mRNA	ACA1_334660	NW_004457256.1	2595	3580	D	ACA1_334660	join(<2595..2670,2770..3012,3091..3237,3331..3405,3513..>3580)	Acanthamoeba castellanii str. Neff	14911508
ACA1_334770	mRNA	ACA1_334770	NW_004457256.1	7294	8120	R	ACA1_334770	complement(join(<7294..7820,7916..>8120))	Acanthamoeba castellanii str. Neff	14911509
ACA1_334780	mRNA	ACA1_334780	NW_004457256.1	8623	9053	D	ACA1_334780	join(<8623..8661,8760..>9053)	Acanthamoeba castellanii str. Neff	14911511
ACA1_334790	mRNA	ACA1_334790	NW_004457256.1	9843	10355	R	ACA1_334790	complement(join(<9843..10154,10266..>10355))	Acanthamoeba castellanii str. Neff	14911507
ACA1_160500	mRNA	ACA1_160500	NW_004457255.1	95	307	R	ACA1_160500	complement(<95..>307)	Acanthamoeba castellanii str. Neff	14911503
ACA1_160510	mRNA	ACA1_160510	NW_004457255.1	796	1703	D	ACA1_160510	join(<796..1209,1325..1516,1551..1628,1674..>1703)	Acanthamoeba castellanii str. Neff	14911497
ACA1_160620	mRNA	ACA1_160620	NW_004457255.1	2532	3709	D	ACA1_160620	join(<2532..2709,2805..2957,3041..3308,3399..3525,3677..>3709)	Acanthamoeba castellanii str. Neff	14911500
ACA1_160630	mRNA	ACA1_160630	NW_004457255.1	3988	4680	D	ACA1_160630	join(<3988..4134,4233..4313,4540..>4680)	Acanthamoeba castellanii str. Neff	14911505
ACA1_160740	mRNA	ACA1_160740	NW_004457255.1	5002	6285	D	ACA1_160740	join(<5002..5111,5281..5371,5457..5543,5653..5739,5911..6033,6115..>6285)	Acanthamoeba castellanii str. Neff	14911496
ACA1_160750	mRNA	ACA1_160750	NW_004457255.1	6840	7872	D	ACA1_160750	join(<6840..6867,7095..7201,7355..7507,7606..>7872)	Acanthamoeba castellanii str. Neff	14911499
ACA1_160760	mRNA	ACA1_160760	NW_004457255.1	8087	8818	R	ACA1_160760	complement(join(<8087..8167,8268..8357,8510..>8818))	Acanthamoeba castellanii str. Neff	14911502
ACA1_160870	mRNA	ACA1_160870	NW_004457255.1	10322	11485	D	ACA1_160870	join(<10322..10483,10566..10747,10869..10965,11032..11261,11342..11410,11470..>11485)	Acanthamoeba castellanii str. Neff	14911498
ACA1_160880	mRNA	ACA1_160880	NW_004457255.1	11688	12882	R	ACA1_160880	complement(join(<11688..11706,11953..12104,12246..12343,12466..12731,12809..>12882))	Acanthamoeba castellanii str. Neff	14911504
ACA1_160890	mRNA	ACA1_160890	NW_004457255.1	13124	13492	R	ACA1_160890	complement(<13124..>13492)	Acanthamoeba castellanii str. Neff	14911501
ACA1_009890	mRNA	ACA1_009890	NW_004457254.1	127	2689	R	ACA1_009890	complement(join(<127..244,339..623,711..804,910..1063,1209..1301,1407..1586,1696..1845,2120..2256,2623..>2689))	Acanthamoeba castellanii str. Neff	14911491
ACA1_009900	mRNA	ACA1_009900	NW_004457254.1	3476	4753	R	ACA1_009900	complement(join(<3476..3849,3936..4040,4168..>4753))	Acanthamoeba castellanii str. Neff	14911490
ACA1_009910	mRNA	ACA1_009910	NW_004457254.1	5305	8024	D	ACA1_009910	join(<5305..5704,5797..5882,5986..6058,6160..6257,6336..6413,6483..6575,6720..6869,6956..7060,7187..7282,7568..7688,7768..>8024)	Acanthamoeba castellanii str. Neff	14911492
ACA1_009920	mRNA	ACA1_009920	NW_004457254.1	8070	10506	R	ACA1_009920	complement(join(<8070..8349,8509..8596,8666..8759,8892..9043,9134..9203,9343..9437,9563..9703,9859..9937,10016..10167,10219..10395,10476..>10506))	Acanthamoeba castellanii str. Neff	14911494
ACA1_009930	mRNA	ACA1_009930	NW_004457254.1	11053	13652	D	ACA1_009930	join(<11053..11298,11384..11461,11572..11657,11800..11911,12059..12139,12228..12428,12511..12586,12689..12811,12897..13249,13347..13460,13548..>13652)	Acanthamoeba castellanii str. Neff	14911489
ACA1_009940	mRNA	ACA1_009940	NW_004457254.1	13755	14769	D	ACA1_009940	join(<13755..13806,13972..14184,14311..14468,14608..>14769)	Acanthamoeba castellanii str. Neff	14911493
ACA1_010050	mRNA	ACA1_010050	NW_004457254.1	17531	18138	R	ACA1_010050	complement(<17531..>18138)	Acanthamoeba castellanii str. Neff	14911495
ACA1_344350	mRNA	ACA1_344350	NW_004457253.1	13000	13302	R	ACA1_344350	complement(<13000..>13302)	Acanthamoeba castellanii str. Neff	14911486
ACA1_344360	mRNA	ACA1_344360	NW_004457253.1	14156	14538	R	ACA1_344360	complement(join(<14156..14296,14365..>14538))	Acanthamoeba castellanii str. Neff	14911487
ACA1_344470	mRNA	ACA1_344470	NW_004457253.1	18251	18669	R	ACA1_344470	complement(join(<18251..18310,18393..18503,18586..>18669))	Acanthamoeba castellanii str. Neff	14911488
ACA1_344480	mRNA	ACA1_344480	NW_004457253.1	19013	19828	D	ACA1_344480	join(<19013..19394,19496..19658,19735..>19828)	Acanthamoeba castellanii str. Neff	14911485
ACA1_048030	mRNA	ACA1_048030	NW_004457252.1	23	2711	D	ACA1_048030	join(<23..207,342..476,576..680,793..893,984..1117,1188..1369,1430..1627,1745..1845,1955..2201,2321..2445,2560..>2711)	Acanthamoeba castellanii str. Neff	14911436
ACA1_048040	mRNA	ACA1_048040	NW_004457252.1	3359	4992	D	ACA1_048040	join(<3359..3559,3632..3982,4161..4406,4487..4624,4753..>4992)	Acanthamoeba castellanii str. Neff	14911434
ACA1_048050	mRNA	ACA1_048050	NW_004457252.1	5403	5696	R	ACA1_048050	complement(<5403..>5696)	Acanthamoeba castellanii str. Neff	14911480
ACA1_048060	mRNA	ACA1_048060	NW_004457252.1	5921	11353	R	ACA1_048060	complement(join(<5921..6201,6281..6393,6539..6660,6788..7055,7128..7317,7397..7501,7605..7710,7837..8082,8168..8466,8557..8784,8864..9026,9116..9227,9339..9446,9565..9760,9826..9973,10121..10228,10360..10470,10558..10676,10828..10934,11044..11088,11247..>11353))	Acanthamoeba castellanii str. Neff	14911450
ACA1_048070	mRNA	ACA1_048070	NW_004457252.1	11599	13423	R	ACA1_048070	complement(join(<11599..12042,12122..12481,12566..12803,12924..13270,13334..>13423))	Acanthamoeba castellanii str. Neff	14911478
ACA1_048080	mRNA	ACA1_048080	NW_004457252.1	14115	17794	R	ACA1_048080	complement(join(<14115..14185,14284..14432,14529..14964,15040..15265,15329..15481,15590..15733,15857..16012,16117..16788,16923..17042,17148..17266,17368..17437,17531..17657,17721..>17794))	Acanthamoeba castellanii str. Neff	14911468
ACA1_048090	mRNA	ACA1_048090	NW_004457252.1	18458	19451	D	ACA1_048090	join(<18458..18556,18636..18781,18848..18947,19050..19142,19212..>19451)	Acanthamoeba castellanii str. Neff	14911473
ACA1_048100	mRNA	ACA1_048100	NW_004457252.1	19883	21028	D	ACA1_048100	<19883..>21028	Acanthamoeba castellanii str. Neff	14911460
ACA1_048110	mRNA	ACA1_048110	NW_004457252.1	21741	24764	R	ACA1_048110	complement(join(<21741..21937,22111..22237,22330..22456,22527..22660,22745..22858,22949..23044,23127..23317,23396..23552,23639..23693,23773..23872,23983..24054,24143..24254,24513..>24764))	Acanthamoeba castellanii str. Neff	14911453
ACA1_048120	mRNA	ACA1_048120	NW_004457252.1	25384	28981	D	ACA1_048120	join(<25384..25805,25939..26014,26141..26213,26282..26359,26457..26521,26611..26679,26781..26906,26979..27047,27209..27430,27679..27742,28047..28209,28295..28354,28379..28866,28938..>28981)	Acanthamoeba castellanii str. Neff	14911454
ACA1_048130	mRNA	ACA1_048130	NW_004457252.1	29358	30741	R	ACA1_048130	complement(join(<29358..29419,29477..29549,29678..29761,29855..29941,30038..30103,30267..30350,30436..30504,30625..>30741))	Acanthamoeba castellanii str. Neff	14911481
ACA1_048140	mRNA	ACA1_048140	NW_004457252.1	31198	33467	D	ACA1_048140	join(<31198..31229,31256..31369,31492..31540,31605..31822,31901..31964,32028..32108,32209..32257,32374..32541,32600..32685,32773..32967,33050..33121,33194..33342,33434..>33467)	Acanthamoeba castellanii str. Neff	14911470
ACA1_048150	mRNA	ACA1_048150	NW_004457252.1	33727	39349	D	ACA1_048150	join(<33727..33978,34057..34239,34346..34459,34537..34840,34904..35021,35137..35297,35438..35862,35930..36001,36090..36225,36321..36449,36537..36718,36825..36971,37088..37279,37396..37602,37699..37954,38035..38177,38285..38814,38924..39036,39168..>39349)	Acanthamoeba castellanii str. Neff	14911484
ACA1_048160	mRNA	ACA1_048160	NW_004457252.1	39653	41684	D	ACA1_048160	join(<39653..39719,39913..40072,40230..40381,40462..40509,40598..40712,40828..40933,41114..41228,41379..41524,41658..>41684)	Acanthamoeba castellanii str. Neff	14911459
ACA1_048170	mRNA	ACA1_048170	NW_004457252.1	42210	44569	R	ACA1_048170	complement(join(<42210..42348,42447..42621,42695..42947,43059..43172,43273..43554,43620..43681,43760..43909,43986..44090,44308..>44569))	Acanthamoeba castellanii str. Neff	14911452
ACA1_048180	mRNA	ACA1_048180	NW_004457252.1	45262	50206	R	ACA1_048180	complement(join(<45262..45407,45493..45640,45659..45731,45832..46006,46123..46303,46610..46858,46965..47054,47221..47337,47449..48201,48309..48480,48617..48768,48860..49280,49364..49536,49631..49753,49825..49869,49991..>50206))	Acanthamoeba castellanii str. Neff	14911464
ACA1_048200	mRNA	ACA1_048200	NW_004457252.1	54560	55895	R	ACA1_048200	complement(join(<54560..54678,54799..55003,55108..55349,55555..55699,55779..>55895))	Acanthamoeba castellanii str. Neff	14911439
ACA1_048210	mRNA	ACA1_048210	NW_004457252.1	56515	57351	D	ACA1_048210	join(<56515..56541,56562..56802,56876..>57351)	Acanthamoeba castellanii str. Neff	14911471
ACA1_048220	mRNA	ACA1_048220	NW_004457252.1	57751	58311	R	ACA1_048220	complement(<57751..>58311)	Acanthamoeba castellanii str. Neff	14911438
ACA1_048230	mRNA	ACA1_048230	NW_004457252.1	59437	61941	D	ACA1_048230	join(<59437..60021,60119..60422,60506..60708,60796..60879,60963..61031,61096..61311,61426..>61941)	Acanthamoeba castellanii str. Neff	14911443
ACA1_048240	mRNA	ACA1_048240	NW_004457252.1	62133	64626	R	ACA1_048240	complement(join(<62133..62862,62984..63081,63211..63327,63442..63509,63619..63818,63944..64075,64201..64379,64615..>64626))	Acanthamoeba castellanii str. Neff	14911451
ACA1_048250	mRNA	ACA1_048250	NW_004457252.1	65451	69711	D	ACA1_048250	join(<65451..65517,65629..65724,65879..65940,66109..66177,66274..66381,66467..66688,66800..66935,67023..67102,67218..67337,67441..67574,67778..68048,68136..68493,68616..68720,68809..68886,68984..69243,69322..69402,69484..69570,69658..>69711)	Acanthamoeba castellanii str. Neff	14911465
ACA1_048260	mRNA	ACA1_048260	NW_004457252.1	70398	71048	D	ACA1_048260	<70398..>71048	Acanthamoeba castellanii str. Neff	14911477
ACA1_048370	mRNA	ACA1_048370	NW_004457252.1	71218	74708	D	ACA1_048370	join(<71218..71225,71340..71452,71527..71683,71787..71888,72003..72160,72251..72426,72525..72852,72984..73231,73344..73747,73886..74276,74478..>74708)	Acanthamoeba castellanii str. Neff	14911474
ACA1_048380	mRNA	ACA1_048380	NW_004457252.1	74168	75362	R	ACA1_048380	complement(join(<74168..74252,74338..74379,74503..74840,75029..75184,75285..>75362))	Acanthamoeba castellanii str. Neff	14911445
ACA1_048390	mRNA	ACA1_048390	NW_004457252.1	75370	76511	D	ACA1_048390	join(<75370..75407,75562..75697,75788..75905,75975..76139,76222..76302,76384..>76511)	Acanthamoeba castellanii str. Neff	14911437
ACA1_048400	mRNA	ACA1_048400	NW_004457252.1	77052	79115	D	ACA1_048400	join(<77052..77291,77457..77759,77881..78360,78442..78640,78761..78882,79005..>79115)	Acanthamoeba castellanii str. Neff	14911432
ACA1_048410	mRNA	ACA1_048410	NW_004457252.1	79872	83141	D	ACA1_048410	join(<79872..79916,79956..80219,80364..80530,80634..81058,81186..81349,81492..81609,81761..81880,81963..81975,82009..82100,82232..82314,82433..82599,82743..82873,82978..>83141)	Acanthamoeba castellanii str. Neff	14911475
ACA1_048420	mRNA	ACA1_048420	NW_004457252.1	83285	88171	R	ACA1_048420	complement(join(<83285..85041,85131..85728,85851..85964,86049..87606,87794..87912,87985..88102,88161..>88171))	Acanthamoeba castellanii str. Neff	14911469
ACA1_048430	mRNA	ACA1_048430	NW_004457252.1	88405	93145	D	ACA1_048430	join(<88405..88410,88525..88583,88659..88738,88804..88890,89000..89093,89193..89326,89421..89485,89599..89692,89828..89963,90043..90163,90349..90591,90659..90866,90960..91062,91160..91268,91396..91506,91592..91678,91783..91854,91930..92049,92138..>93145)	Acanthamoeba castellanii str. Neff	14911463
ACA1_048440	mRNA	ACA1_048440	NW_004457252.1	93536	96330	R	ACA1_048440	complement(join(<93536..94023,94172..94333,94441..94552,94651..94757,94862..94961,95111..95175,95328..>96330))	Acanthamoeba castellanii str. Neff	14911456
ACA1_048450	mRNA	ACA1_048450	NW_004457252.1	96783	99365	R	ACA1_048450	complement(join(<96783..96971,97050..97183,97365..97652,97874..98737,98845..99199,99273..>99365))	Acanthamoeba castellanii str. Neff	14911446
ACA1_048470	mRNA	ACA1_048470	NW_004457252.1	103732	118659	R	ACA1_048470	complement(join(<103732..104328,104471..104604,104699..104777,104877..104973,105123..105259,105381..105496,105671..106418,106540..106705,106790..106835,106870..107185,107297..107419,107558..107635,107803..107955,108140..108295,108452..108645,108828..108910,109048..109102,109209..109391,109458..110445,110480..111022,111205..111330,111448..111565,111661..111844,111976..112141,112264..112442,112574..112676,112812..112928,112977..113102,113242..113686,113861..113955,114117..114267,114341..114593,114690..115205,115338..115422,115532..115679,115773..115905,116010..116172,116259..116343,116497..117258,117348..117522,117610..117689,117738..117765,117797..118312,118458..>118659))	Acanthamoeba castellanii str. Neff	14911448
ACA1_048480	mRNA	ACA1_048480	NW_004457252.1	118776	122848	R	ACA1_048480	complement(join(<118776..118912,118995..119085,119233..119327,119460..119592,119773..119835,119881..120008,120091..120206,120336..120510,120592..120732,120903..121067,121182..121305,121401..121541,121642..121719,121837..121947,122113..122196,122295..122387,122540..122645,122766..>122848))	Acanthamoeba castellanii str. Neff	14911461
ACA1_048490	mRNA	ACA1_048490	NW_004457252.1	123085	127280	D	ACA1_048490	join(<123085..123238,123311..123652,123726..123935,124162..125177,125271..127152,127231..>127280)	Acanthamoeba castellanii str. Neff	14911447
ACA1_048500	mRNA	ACA1_048500	NW_004457252.1	127597	132606	R	ACA1_048500	complement(join(<127597..128205,128318..128513,128653..128696,128786..128920,129042..129229,129325..129414,129514..129628,129813..129946,130072..130267,130392..130498,130592..130700,131049..131198,131385..131526,131642..131705,131941..132048,132210..>132606))	Acanthamoeba castellanii str. Neff	14911457
ACA1_048510	mRNA	ACA1_048510	NW_004457252.1	132856	136633	D	ACA1_048510	join(<132856..133191,133272..133325,133406..133606,133730..133905,134029..134170,134538..134612,134749..134855,134924..135014,135192..135276,135386..135521,135591..135720,135794..135912,136096..136288,136382..>136633)	Acanthamoeba castellanii str. Neff	14911472
ACA1_048520	mRNA	ACA1_048520	NW_004457252.1	136674	138217	R	ACA1_048520	complement(join(<136674..136811,136925..137098,137212..137323,137379..137856,137964..138033,138095..>138217))	Acanthamoeba castellanii str. Neff	14911458
ACA1_048530	mRNA	ACA1_048530	NW_004457252.1	138751	139369	D	ACA1_048530	join(<138751..139147,139293..>139369)	Acanthamoeba castellanii str. Neff	14911466
ACA1_048540	mRNA	ACA1_048540	NW_004457252.1	139721	141769	D	ACA1_048540	join(<139721..141505,141677..>141769)	Acanthamoeba castellanii str. Neff	14911433
ACA1_048550	mRNA	ACA1_048550	NW_004457252.1	142312	147146	R	ACA1_048550	complement(join(<142312..143037,143142..143786,143859..144192,144335..144409,144439..144532,144695..144825,145004..145522,145607..146091,146199..146299,146423..146626,146726..146792,146892..>147146))	Acanthamoeba castellanii str. Neff	14911444
ACA1_048560	mRNA	ACA1_048560	NW_004457252.1	147299	148847	D	ACA1_048560	join(<147299..147463,147564..147638,147763..147988,148085..148326,148430..148533,148634..>148847)	Acanthamoeba castellanii str. Neff	14911476
ACA1_048590	mRNA	ACA1_048590	NW_004457252.1	158256	160168	R	ACA1_048590	complement(join(<158256..158425,158588..159004,159084..159248,159361..159525,159600..159826,159975..>160168))	Acanthamoeba castellanii str. Neff	14911467
ACA1_048600	mRNA	ACA1_048600	NW_004457252.1	160197	162223	R	ACA1_048600	complement(join(<160197..160216,160254..160334,160461..160547,160805..160903,161003..161091,161250..161328,161424..161517,161621..161708,161840..161931,162074..>162223))	Acanthamoeba castellanii str. Neff	14911435
ACA1_048610	mRNA	ACA1_048610	NW_004457252.1	163950	164138	R	ACA1_048610	complement(<163950..>164138)	Acanthamoeba castellanii str. Neff	14911442
ACA1_048620	mRNA	ACA1_048620	NW_004457252.1	164405	165211	R	ACA1_048620	complement(join(<164405..164554,164577..164639,164687..164774,164879..165003,165101..>165211))	Acanthamoeba castellanii str. Neff	14911455
ACA1_048630	mRNA	ACA1_048630	NW_004457252.1	165583	184029	D	ACA1_048630	join(<165583..166014,166199..166366,166573..166998,167118..167308,167400..167622,167813..168431,168559..168764,168973..169130,169304..169850,169981..170332,170560..170728,170819..171092,171252..171504,171620..171796,171967..172580,172815..172982,173175..173420,173555..173729,173846..174066,174173..174775,174872..175053,175330..175564,175684..175863,175984..176374,176503..176606,176791..176892,177085..177226,177374..177396,177472..177654,177849..177985,178150..178358,178470..178672,178848..179995,180152..180292,180362..180389,180610..180867,180973..181002,181287..181614,181778..181900,182236..182367,182568..182815,183016..183278,183393..183603,183754..>184029)	Acanthamoeba castellanii str. Neff	14911483
ACA1_048640	mRNA	ACA1_048640	NW_004457252.1	184124	187200	R	ACA1_048640	complement(join(<184124..184602,184689..184929,185120..185233,185344..185671,185847..185986,186102..186317,186471..186545,186680..186919,187069..>187200))	Acanthamoeba castellanii str. Neff	14911462
ACA1_048650	mRNA	ACA1_048650	NW_004457252.1	187793	190472	D	ACA1_048650	join(<187793..187916,188043..188167,188324..188396,188435..188541,188643..188750,188896..189036,189117..189332,189415..189516,189608..189707,189767..189913,190009..190111,190181..>190472)	Acanthamoeba castellanii str. Neff	14911440
ACA1_298420	mRNA	ACA1_298420	NW_004457251.1	1302	1775	D	ACA1_298420	<1302..>1775	Acanthamoeba castellanii str. Neff	14911431
ACA1_298530	mRNA	ACA1_298530	NW_004457251.1	9393	10103	R	ACA1_298530	complement(join(<9393..9761,9888..>10103))	Acanthamoeba castellanii str. Neff	14911430
ACA1_317170	mRNA	ACA1_317170	NW_004457250.1	126	4361	R	ACA1_317170	complement(join(<126..570,657..757,889..1020,1091..1276,1377..1535,1647..2428,2518..3051,3123..3404,3512..3606,3768..3862,4053..>4361))	Acanthamoeba castellanii str. Neff	14911424
ACA1_317280	mRNA	ACA1_317280	NW_004457250.1	8045	8452	D	ACA1_317280	<8045..>8452	Acanthamoeba castellanii str. Neff	14911427
ACA1_317290	mRNA	ACA1_317290	NW_004457250.1	8873	10646	D	ACA1_317290	join(<8873..9645,9726..9819,9892..9971,10063..10177,10276..10323,10422..>10646)	Acanthamoeba castellanii str. Neff	14911425
ACA1_317300	mRNA	ACA1_317300	NW_004457250.1	10713	11747	R	ACA1_317300	complement(join(<10713..10808,10926..11064,11152..11229,11330..11416,11530..11635,11720..>11747))	Acanthamoeba castellanii str. Neff	14911428
ACA1_317410	mRNA	ACA1_317410	NW_004457250.1	12989	13625	R	ACA1_317410	complement(join(<12989..13099,13219..13296,13416..>13625))	Acanthamoeba castellanii str. Neff	14911426
ACA1_317520	mRNA	ACA1_317520	NW_004457250.1	13785	14740	D	ACA1_317520	join(<13785..13803,13893..14060,14180..14259,14347..14466,14585..>14740)	Acanthamoeba castellanii str. Neff	14911422
ACA1_317530	mRNA	ACA1_317530	NW_004457250.1	14951	15298	D	ACA1_317530	<14951..>15298	Acanthamoeba castellanii str. Neff	14911423
ACA1_317540	mRNA	ACA1_317540	NW_004457250.1	16970	18022	D	ACA1_317540	join(<16970..17010,17113..17311,17502..17547,17664..17774,17844..>18022)	Acanthamoeba castellanii str. Neff	14911429
ACA1_317550	mRNA	ACA1_317550	NW_004457250.1	18204	20336	R	ACA1_317550	complement(join(<18204..18311,18443..18521,18630..18757,19009..19050,19131..19238,19337..19417,19525..19574,19686..19860,19989..20057,20220..>20336))	Acanthamoeba castellanii str. Neff	14911421
ACA1_353980	mRNA	ACA1_353980	NW_004457249.1	55	527	R	ACA1_353980	complement(join(<55..168,301..450,507..>527))	Acanthamoeba castellanii str. Neff	14911409
ACA1_354090	mRNA	ACA1_354090	NW_004457249.1	1059	1979	R	ACA1_354090	complement(join(<1059..1287,1469..1686,1947..>1979))	Acanthamoeba castellanii str. Neff	14911414
ACA1_354200	mRNA	ACA1_354200	NW_004457249.1	2965	6605	R	ACA1_354200	complement(join(<2965..3243,3347..3451,3521..3595,5924..6095,6195..6366,6458..>6605))	Acanthamoeba castellanii str. Neff	14911410
ACA1_354310	mRNA	ACA1_354310	NW_004457249.1	6967	7245	R	ACA1_354310	complement(<6967..>7245)	Acanthamoeba castellanii str. Neff	14911415
ACA1_354320	mRNA	ACA1_354320	NW_004457249.1	7455	8063	D	ACA1_354320	<7455..>8063	Acanthamoeba castellanii str. Neff	14911420
ACA1_354330	mRNA	ACA1_354330	NW_004457249.1	8125	8888	R	ACA1_354330	complement(join(<8125..8504,8681..>8888))	Acanthamoeba castellanii str. Neff	14911419
ACA1_354340	mRNA	ACA1_354340	NW_004457249.1	17178	17746	R	ACA1_354340	complement(join(<17178..17238,17323..17396,17606..>17746))	Acanthamoeba castellanii str. Neff	14911411
ACA1_354350	mRNA	ACA1_354350	NW_004457249.1	18401	19194	R	ACA1_354350	complement(join(<18401..18462,18537..18977,19014..>19194))	Acanthamoeba castellanii str. Neff	14911418
ACA1_354360	mRNA	ACA1_354360	NW_004457249.1	22394	22949	D	ACA1_354360	join(<22394..22753,22782..>22949)	Acanthamoeba castellanii str. Neff	14911408
ACA1_354370	mRNA	ACA1_354370	NW_004457249.1	23037	24849	R	ACA1_354370	complement(join(<23037..23795,23885..23920,24790..>24849))	Acanthamoeba castellanii str. Neff	14911413
ACA1_354480	mRNA	ACA1_354480	NW_004457249.1	25227	25619	R	ACA1_354480	complement(join(<25227..25235,25347..>25619))	Acanthamoeba castellanii str. Neff	14911417
ACA1_354490	mRNA	ACA1_354490	NW_004457249.1	25867	26227	R	ACA1_354490	complement(join(<25867..26003,26098..>26227))	Acanthamoeba castellanii str. Neff	14911412
ACA1_354500	mRNA	ACA1_354500	NW_004457249.1	26283	27866	D	ACA1_354500	join(<26283..26303,27024..27077,27181..27318,27475..27741,27819..>27866)	Acanthamoeba castellanii str. Neff	14911416
ACA1_008410	mRNA	ACA1_008410	NW_004457248.1	12667	13067	R	ACA1_008410	complement(join(<12667..12849,12924..>13067))	Acanthamoeba castellanii str. Neff	14911407
ACA1_102890	mRNA	ACA1_102890	NW_004457247.1	87	266	R	ACA1_102890	complement(<87..>266)	Acanthamoeba castellanii str. Neff	14911369
ACA1_102900	mRNA	ACA1_102900	NW_004457247.1	512	916	D	ACA1_102900	<512..>916	Acanthamoeba castellanii str. Neff	14911391
ACA1_102910	mRNA	ACA1_102910	NW_004457247.1	1033	1338	R	ACA1_102910	complement(<1033..>1338)	Acanthamoeba castellanii str. Neff	14911390
ACA1_103020	mRNA	ACA1_103020	NW_004457247.1	1822	2336	R	ACA1_103020	complement(<1822..>2336)	Acanthamoeba castellanii str. Neff	14911388
ACA1_103140	mRNA	ACA1_103140	NW_004457247.1	6571	7559	D	ACA1_103140	join(<6571..7071,7159..7293,7365..>7559)	Acanthamoeba castellanii str. Neff	14911385
ACA1_103150	mRNA	ACA1_103150	NW_004457247.1	7694	8334	D	ACA1_103150	join(<7694..7755,7853..7967,8041..8166,8251..>8334)	Acanthamoeba castellanii str. Neff	14911405
ACA1_103160	mRNA	ACA1_103160	NW_004457247.1	8844	10499	D	ACA1_103160	join(<8844..8856,8931..9074,9613..9668,9739..9834,9914..10002,10094..10249,10340..>10499)	Acanthamoeba castellanii str. Neff	14911384
ACA1_103170	mRNA	ACA1_103170	NW_004457247.1	11030	13422	D	ACA1_103170	join(<11030..11803,11883..11967,12071..12172,12260..12482,12614..12761,12835..12900,12989..13138,13155..13209,13281..13303,13345..>13422)	Acanthamoeba castellanii str. Neff	14911404
ACA1_103180	mRNA	ACA1_103180	NW_004457247.1	13874	14325	D	ACA1_103180	join(<13874..13966,14066..14176,14254..>14325)	Acanthamoeba castellanii str. Neff	14911403
ACA1_103190	mRNA	ACA1_103190	NW_004457247.1	15153	17668	R	ACA1_103190	complement(join(<15153..15203,15298..15465,15544..15616,15683..15752,15837..15906,16012..16127,16207..16374,16495..16588,16757..16896,16998..17105,17184..17287,17373..17497,17582..>17668))	Acanthamoeba castellanii str. Neff	14911402
ACA1_103200	mRNA	ACA1_103200	NW_004457247.1	18379	18812	R	ACA1_103200	complement(join(<18379..18402,18456..>18812))	Acanthamoeba castellanii str. Neff	14911401
ACA1_103210	mRNA	ACA1_103210	NW_004457247.1	19149	19970	D	ACA1_103210	join(<19149..19355,19417..19566,19629..>19970)	Acanthamoeba castellanii str. Neff	14911400
ACA1_103220	mRNA	ACA1_103220	NW_004457247.1	20887	24805	D	ACA1_103220	join(<20887..21079,21221..21289,21442..21570,21638..21744,21823..21897,22023..22118,22205..22329,22408..22616,22637..22707,22802..23530,23593..24142,24233..24527,24607..24656,24747..>24805)	Acanthamoeba castellanii str. Neff	14911368
ACA1_103330	mRNA	ACA1_103330	NW_004457247.1	28409	28942	R	ACA1_103330	complement(join(<28409..28497,28583..28712,28799..>28942))	Acanthamoeba castellanii str. Neff	14911406
ACA1_103340	mRNA	ACA1_103340	NW_004457247.1	29276	30392	R	ACA1_103340	complement(join(<29276..29534,29569..29972,30075..30244,30317..>30392))	Acanthamoeba castellanii str. Neff	14911383
ACA1_103350	mRNA	ACA1_103350	NW_004457247.1	30464	31593	R	ACA1_103350	complement(join(<30464..30972,31036..31122,31196..31280,31339..>31593))	Acanthamoeba castellanii str. Neff	14911392
ACA1_103370	mRNA	ACA1_103370	NW_004457247.1	35413	36268	D	ACA1_103370	join(<35413..35503,35589..35749,35820..36037,36121..>36268)	Acanthamoeba castellanii str. Neff	14911379
ACA1_103380	mRNA	ACA1_103380	NW_004457247.1	37392	38971	D	ACA1_103380	join(<37392..37494,37563..37786,37861..37971,38030..38083,38292..38366,38425..38592,38665..38758,38832..>38971)	Acanthamoeba castellanii str. Neff	14911393
ACA1_103590	mRNA	ACA1_103590	NW_004457247.1	40848	41576	D	ACA1_103590	<40848..>41576	Acanthamoeba castellanii str. Neff	14911387
ACA1_103600	mRNA	ACA1_103600	NW_004457247.1	41726	43252	D	ACA1_103600	join(<41726..41816,41897..42360,42457..42540,42630..42750,42846..42873,42943..43003,43079..>43252)	Acanthamoeba castellanii str. Neff	14911395
ACA1_103610	mRNA	ACA1_103610	NW_004457247.1	43510	44433	R	ACA1_103610	complement(join(<43510..43626,43693..43781,43862..43936,44010..44150,44209..44266,44344..>44433))	Acanthamoeba castellanii str. Neff	14911375
ACA1_103620	mRNA	ACA1_103620	NW_004457247.1	45287	46902	D	ACA1_103620	join(<45287..45887,45998..46082,46298..46374,46468..46682,46765..>46902)	Acanthamoeba castellanii str. Neff	14911380
ACA1_103630	mRNA	ACA1_103630	NW_004457247.1	47146	48912	D	ACA1_103630	join(<47146..47179,47297..47466,47656..47733,47817..47949,48111..48280,48421..48498,48577..>48912)	Acanthamoeba castellanii str. Neff	14911371
ACA1_103640	mRNA	ACA1_103640	NW_004457247.1	50001	50987	D	ACA1_103640	join(<50001..50049,50117..50286,50409..50486,50652..>50987)	Acanthamoeba castellanii str. Neff	14911382
ACA1_103750	mRNA	ACA1_103750	NW_004457247.1	52189	52684	D	ACA1_103750	join(<52189..52237,52309..52478,52607..>52684)	Acanthamoeba castellanii str. Neff	14911381
ACA1_103860	mRNA	ACA1_103860	NW_004457247.1	53506	55361	R	ACA1_103860	complement(join(<53506..53652,53712..53789,53857..53957,54017..54119,54194..54297,54381..54461,54527..54575,54667..54715,54845..54945,55012..55315,55330..>55361))	Acanthamoeba castellanii str. Neff	14911374
ACA1_103870	mRNA	ACA1_103870	NW_004457247.1	55481	58983	R	ACA1_103870	complement(join(<55481..55594,55683..55773,55843..57434,57514..58040,58115..58493,58582..58660,58719..58817,58910..>58983))	Acanthamoeba castellanii str. Neff	14911378
ACA1_103880	mRNA	ACA1_103880	NW_004457247.1	59216	60605	R	ACA1_103880	complement(join(<59216..59225,59246..59325,59422..59440,59537..59709,59788..59925,59993..60156,60277..60358,60492..>60605))	Acanthamoeba castellanii str. Neff	14911377
ACA1_103990	mRNA	ACA1_103990	NW_004457247.1	63053	64276	R	ACA1_103990	complement(join(<63053..63130,63202..63287,63376..63530,63611..63729,63823..63965,64054..64150,64235..>64276))	Acanthamoeba castellanii str. Neff	14911399
ACA1_104000	mRNA	ACA1_104000	NW_004457247.1	65022	66594	R	ACA1_104000	complement(join(<65022..65257,65331..65384,65460..65859,65994..66262,66573..>66594))	Acanthamoeba castellanii str. Neff	14911376
ACA1_104010	mRNA	ACA1_104010	NW_004457247.1	67041	68097	D	ACA1_104010	join(<67041..67092,67319..67365,67408..>68097)	Acanthamoeba castellanii str. Neff	14911398
ACA1_104230	mRNA	ACA1_104230	NW_004457247.1	72406	72786	R	ACA1_104230	complement(<72406..>72786)	Acanthamoeba castellanii str. Neff	14911394
ACA1_104240	mRNA	ACA1_104240	NW_004457247.1	73163	74577	R	ACA1_104240	complement(join(<73163..73240,73277..73450,73588..73716,73873..73974,74053..74169,74210..74444,74525..>74577))	Acanthamoeba castellanii str. Neff	14911397
ACA1_104250	mRNA	ACA1_104250	NW_004457247.1	74704	75189	D	ACA1_104250	join(<74704..74974,75072..>75189)	Acanthamoeba castellanii str. Neff	14911373
ACA1_104360	mRNA	ACA1_104360	NW_004457247.1	75602	78190	D	ACA1_104360	join(<75602..75651,75911..76050,76131..76283,76356..76505,76576..76725,76793..76949,77015..77192,77272..77643,77707..77802,77886..78039,78108..>78190)	Acanthamoeba castellanii str. Neff	14911372
ACA1_104570	mRNA	ACA1_104570	NW_004457247.1	79622	80949	D	ACA1_104570	join(<79622..79858,79924..79985,80054..80134,80223..80336,80401..80517,80614..80724,80808..>80949)	Acanthamoeba castellanii str. Neff	14911370
ACA1_337740	mRNA	ACA1_337740	NW_004457246.1	102	1317	R	ACA1_337740	complement(join(<102..223,294..362,471..514,598..1145,1219..>1317))	Acanthamoeba castellanii str. Neff	14911354
ACA1_337850	mRNA	ACA1_337850	NW_004457246.1	7576	11633	R	ACA1_337850	complement(join(<7576..7721,7856..7922,8018..8400,8518..8764,8839..8931,8991..9240,9311..9504,9570..9914,10017..10267,10319..10504,10517..10658,10749..10921,11113..11205,11400..11444,11546..>11633))	Acanthamoeba castellanii str. Neff	14911355
ACA1_337960	mRNA	ACA1_337960	NW_004457246.1	11805	13637	R	ACA1_337960	complement(<11805..>13637)	Acanthamoeba castellanii str. Neff	14911356
ACA1_337970	mRNA	ACA1_337970	NW_004457246.1	13976	15450	R	ACA1_337970	complement(join(<13976..14140,14259..14378,14483..14617,14678..14896,14978..15039,15123..>15450))	Acanthamoeba castellanii str. Neff	14911357
ACA1_337980	mRNA	ACA1_337980	NW_004457246.1	19083	21746	D	ACA1_337980	join(<19083..19143,19646..20073,20219..20268,20281..20836,20893..20928,21045..>21746)	Acanthamoeba castellanii str. Neff	14911358
ACA1_337990	mRNA	ACA1_337990	NW_004457246.1	21879	22701	R	ACA1_337990	complement(join(<21879..22006,22083..22182,22279..22326,22353..22385,22525..>22701))	Acanthamoeba castellanii str. Neff	14911359
ACA1_338000	mRNA	ACA1_338000	NW_004457246.1	23009	23539	R	ACA1_338000	complement(join(<23009..23179,23328..23377,23440..>23539))	Acanthamoeba castellanii str. Neff	14911360
ACA1_338010	mRNA	ACA1_338010	NW_004457246.1	23838	24506	D	ACA1_338010	join(<23838..23926,23953..24039,24110..>24506)	Acanthamoeba castellanii str. Neff	14911361
ACA1_338020	mRNA	ACA1_338020	NW_004457246.1	24765	25418	D	ACA1_338020	join(<24765..24967,25040..>25418)	Acanthamoeba castellanii str. Neff	14911362
ACA1_338030	mRNA	ACA1_338030	NW_004457246.1	25076	29099	R	ACA1_338030	complement(join(<25076..25408,25474..25826,25882..26163,26248..26328,26430..26645,26723..26851,26923..27015,27120..27260,27329..27415,27482..27568,27662..27777,27841..28236,28344..28546,28683..28763,28847..28978,29025..>29099))	Acanthamoeba castellanii str. Neff	14911363
ACA1_338040	mRNA	ACA1_338040	NW_004457246.1	29454	34086	D	ACA1_338040	join(<29454..29583,29708..30128,30255..30402,30531..30688,30831..30927,31042..31312,31358..31410,31449..31520,31674..32064,32183..32526,32619..32745,32840..32969,33079..33254,33332..>34086)	Acanthamoeba castellanii str. Neff	14911364
ACA1_338050	mRNA	ACA1_338050	NW_004457246.1	34150	40528	R	ACA1_338050	complement(join(<34150..34347,34447..34777,34855..34993,35069..35552,35677..35804,35885..36035,36122..36319,36411..36608,36705..36955,37035..37177,37300..37400,37449..37533,37614..37663,37759..37818,37952..38077,38155..38325,38429..38564,38654..39011,39034..39184,39372..39592,39686..39835,39925..40249,40484..>40528))	Acanthamoeba castellanii str. Neff	14911365
ACA1_338060	mRNA	ACA1_338060	NW_004457246.1	41098	43745	R	ACA1_338060	complement(join(<41098..41209,41297..41364,41434..41550,41666..41809,41867..42032,42133..42251,42326..42425,42494..42565,42652..42740,42830..42944,43031..43143,43222..43330,43395..43531,43662..>43745))	Acanthamoeba castellanii str. Neff	14911366
ACA1_338070	mRNA	ACA1_338070	NW_004457246.1	44033	46104	R	ACA1_338070	complement(join(<44033..45022,45122..45216,45310..45795,45885..45967,46049..>46104))	Acanthamoeba castellanii str. Neff	14911367
ACA1_338180	mRNA	ACA1_338180	NW_004457246.1	48446	49492	R	ACA1_338180	complement(join(<48446..48884,48942..49039,49123..49192,49317..>49492))	Acanthamoeba castellanii str. Neff	14911352
ACA1_338290	mRNA	ACA1_338290	NW_004457246.1	52217	54977	R	ACA1_338290	complement(join(<52217..52417,52494..52939,53042..53188,53299..53577,53614..53743,53829..53953,54040..54168,54246..54412,54451..54613,54719..>54977))	Acanthamoeba castellanii str. Neff	14911353
ACA1_144560	mRNA	ACA1_144560	NW_004457245.1	154	738	D	ACA1_144560	<154..>738	Acanthamoeba castellanii str. Neff	14911290
ACA1_144570	mRNA	ACA1_144570	NW_004457245.1	1127	3104	D	ACA1_144570	join(<1127..1207,2479..2586,2692..2837,2921..>3104)	Acanthamoeba castellanii str. Neff	14911331
ACA1_144680	mRNA	ACA1_144680	NW_004457245.1	3153	3773	R	ACA1_144680	complement(join(<3153..3373,3647..>3773))	Acanthamoeba castellanii str. Neff	14911327
ACA1_144690	mRNA	ACA1_144690	NW_004457245.1	4036	4580	D	ACA1_144690	join(<4036..4069,4154..4366,4507..>4580)	Acanthamoeba castellanii str. Neff	14911326
ACA1_144800	mRNA	ACA1_144800	NW_004457245.1	4831	5495	D	ACA1_144800	join(<4831..5084,5166..5304,5388..>5495)	Acanthamoeba castellanii str. Neff	14911329
ACA1_144810	mRNA	ACA1_144810	NW_004457245.1	5560	12078	R	ACA1_144810	complement(join(<5560..8341,8437..8578,8657..8823,8906..9143,9328..9450,9591..9677,9764..9843,9937..10225,10344..10479,10565..10656,10762..10858,10957..11082,11231..11390,11518..11588,11698..>12078))	Acanthamoeba castellanii str. Neff	14911323
ACA1_144820	mRNA	ACA1_144820	NW_004457245.1	12582	15933	R	ACA1_144820	complement(join(<12582..12907,13016..13151,13245..13337,13451..13620,13727..13826,13901..13984,14101..14337,14423..14559,14659..14812,14924..15341,15436..15526,15654..>15933))	Acanthamoeba castellanii str. Neff	14911322
ACA1_144830	mRNA	ACA1_144830	NW_004457245.1	16019	22335	R	ACA1_144830	complement(join(<16019..16139,16204..16326,16428..16572,16691..17117,17213..17350,17467..17511,17601..17687,17794..17880,17964..18104,18216..18401,18469..18538,18691..18806,18922..19344,19499..19536,19608..19755,19829..19915,20028..20135,20242..20288,20360..20596,20711..20822,21017..21198,21269..21392,21500..21731,21866..21938,22077..>22335))	Acanthamoeba castellanii str. Neff	14911303
ACA1_144840	mRNA	ACA1_144840	NW_004457245.1	22822	23760	D	ACA1_144840	join(<22822..22980,23140..23436,23536..>23760)	Acanthamoeba castellanii str. Neff	14911298
ACA1_144850	mRNA	ACA1_144850	NW_004457245.1	23822	24652	R	ACA1_144850	complement(join(<23822..23952,24074..24151,24225..24294,24365..24507,24592..>24652))	Acanthamoeba castellanii str. Neff	14911320
ACA1_144860	mRNA	ACA1_144860	NW_004457245.1	26366	30192	D	ACA1_144860	join(<26366..26616,26871..27110,27293..27382,27483..27645,27723..28343,28371..29105,29242..29433,29502..29602,29694..>30192)	Acanthamoeba castellanii str. Neff	14911351
ACA1_144870	mRNA	ACA1_144870	NW_004457245.1	30451	31086	D	ACA1_144870	join(<30451..30668,30682..30870,30891..>31086)	Acanthamoeba castellanii str. Neff	14911317
ACA1_144880	mRNA	ACA1_144880	NW_004457245.1	31175	33577	R	ACA1_144880	complement(join(<31175..31250,31335..31420,31539..31637,31754..31875,31987..32163,32242..32307,32412..32540,32682..32797,32890..33017,33110..33288,33532..>33577))	Acanthamoeba castellanii str. Neff	14911316
ACA1_144890	mRNA	ACA1_144890	NW_004457245.1	34230	34694	R	ACA1_144890	complement(join(<34230..34401,34474..>34694))	Acanthamoeba castellanii str. Neff	14911350
ACA1_144900	mRNA	ACA1_144900	NW_004457245.1	34970	35941	R	ACA1_144900	complement(join(<34970..34998,35145..35403,35501..35683,35804..>35941))	Acanthamoeba castellanii str. Neff	14911314
ACA1_144910	mRNA	ACA1_144910	NW_004457245.1	36283	38614	D	ACA1_144910	join(<36283..36360,36458..36640,36746..36879,37031..37146,37228..37296,37377..37396,37508..37624,37718..37770,37870..37935,37990..38039,38199..>38614)	Acanthamoeba castellanii str. Neff	14911285
ACA1_144920	mRNA	ACA1_144920	NW_004457245.1	38758	41568	R	ACA1_144920	complement(join(<38758..39102,39208..39308,39401..39414,39486..39702,39794..39945,40021..40159,40255..40394,40478..40584,40675..40845,40942..41203,41303..>41568))	Acanthamoeba castellanii str. Neff	14911324
ACA1_144930	mRNA	ACA1_144930	NW_004457245.1	41720	42258	R	ACA1_144930	complement(join(<41720..41854,41981..42093,42165..>42258))	Acanthamoeba castellanii str. Neff	14911311
ACA1_144940	mRNA	ACA1_144940	NW_004457245.1	42502	44867	R	ACA1_144940	complement(join(<42502..43235,43288..43438,43522..44015,44277..44468,44564..>44867))	Acanthamoeba castellanii str. Neff	14911308
ACA1_144950	mRNA	ACA1_144950	NW_004457245.1	46367	46849	R	ACA1_144950	complement(<46367..>46849)	Acanthamoeba castellanii str. Neff	14911309
ACA1_145060	mRNA	ACA1_145060	NW_004457245.1	47645	48831	D	ACA1_145060	join(<47645..48115,48675..48764,48796..>48831)	Acanthamoeba castellanii str. Neff	14911348
ACA1_145170	mRNA	ACA1_145170	NW_004457245.1	49774	53211	D	ACA1_145170	join(<49774..49880,50000..50241,50353..50472,50588..50685,50789..50888,51013..51138,51263..51418,51684..51858,52136..52287,52370..52581,52681..52939,53063..>53211)	Acanthamoeba castellanii str. Neff	14911307
ACA1_145180	mRNA	ACA1_145180	NW_004457245.1	53270	54671	R	ACA1_145180	complement(join(<53270..53470,53558..53681,53751..53858,53922..54054,54134..54356,54468..54542,54615..>54671))	Acanthamoeba castellanii str. Neff	14911297
ACA1_145190	mRNA	ACA1_145190	NW_004457245.1	54691	56643	R	ACA1_145190	complement(join(<54691..54882,54942..55052,55121..55210,55263..55396,55464..55547,55615..55718,55792..55912,56013..56074,56152..56237,56305..>56643))	Acanthamoeba castellanii str. Neff	14911346
ACA1_145200	mRNA	ACA1_145200	NW_004457245.1	56852	57310	R	ACA1_145200	complement(<56852..>57310)	Acanthamoeba castellanii str. Neff	14911305
ACA1_145210	mRNA	ACA1_145210	NW_004457245.1	57601	60520	R	ACA1_145210	complement(join(<57601..57684,57747..58056,58241..58373,58450..58536,58600..58953,59125..59461,59629..59919,59987..>60520))	Acanthamoeba castellanii str. Neff	14911302
ACA1_145220	mRNA	ACA1_145220	NW_004457245.1	61417	62074	R	ACA1_145220	complement(join(<61417..61584,61717..61840,61959..>62074))	Acanthamoeba castellanii str. Neff	14911301
ACA1_145230	mRNA	ACA1_145230	NW_004457245.1	62233	67784	D	ACA1_145230	join(<62233..62436,62565..62627,62734..62771,62864..62992,63153..63300,63442..63545,63640..63719,63816..63976,64110..64210,64322..64405,64496..64595,64734..65021,65118..65288,65364..65423,65534..66659,66725..66783,66850..67164,67273..67320,67412..67533,67631..>67784)	Acanthamoeba castellanii str. Neff	14911296
ACA1_145240	mRNA	ACA1_145240	NW_004457245.1	67937	75638	R	ACA1_145240	complement(join(<67937..68150,68232..68319,68424..68729,68827..68995,69087..69325,69522..70555,70702..71041,71160..71301,71399..71658,71796..71868,71959..72142,72219..72591,72733..72793,72854..73020,73111..73287,73383..73462,73534..73697,73807..73937,74069..74134,74210..74333,74402..74548,74628..74792,74879..74934,75010..75117,75328..75477,75605..>75638))	Acanthamoeba castellanii str. Neff	14911349
ACA1_145250	mRNA	ACA1_145250	NW_004457245.1	76248	77669	R	ACA1_145250	complement(join(<76248..76304,76382..76419,76521..76691,76763..76853,76960..77112,77186..77280,77389..77483,77572..>77669))	Acanthamoeba castellanii str. Neff	14911284
ACA1_145260	mRNA	ACA1_145260	NW_004457245.1	77830	80067	R	ACA1_145260	complement(join(<77830..78885,78992..79361,79490..>80067))	Acanthamoeba castellanii str. Neff	14911342
ACA1_145270	mRNA	ACA1_145270	NW_004457245.1	80242	84928	D	ACA1_145270	join(<80242..80412,80662..80803,81008..81166,81275..81373,81461..81600,81704..81809,81874..82024,82124..82223,82314..82443,82538..82674,82792..82914,83313..83414,83510..83585,83675..83811,83871..84041,84140..84280,84382..84661,84741..>84928)	Acanthamoeba castellanii str. Neff	14911336
ACA1_145280	mRNA	ACA1_145280	NW_004457245.1	85077	87501	D	ACA1_145280	join(<85077..85166,85257..85346,85470..85553,85653..85790,85887..86652,86723..>87501)	Acanthamoeba castellanii str. Neff	14911321
ACA1_145290	mRNA	ACA1_145290	NW_004457245.1	87890	90601	D	ACA1_145290	join(<87890..88865,88962..89206,89298..89494,89509..89915,89983..90218,90293..90444,90529..>90601)	Acanthamoeba castellanii str. Neff	14911315
ACA1_145300	mRNA	ACA1_145300	NW_004457245.1	91029	93676	D	ACA1_145300	join(<91029..91136,91215..91410,91490..91576,92041..92127,92227..92327,92465..92575,92716..92954,93039..93147,93512..>93676)	Acanthamoeba castellanii str. Neff	14911293
ACA1_145410	mRNA	ACA1_145410	NW_004457245.1	93790	95605	R	ACA1_145410	complement(join(<93790..93953,94040..94121,94228..94361,94484..94567,94705..94754,94862..95069,95165..95245,95334..95403,95495..>95605))	Acanthamoeba castellanii str. Neff	14911292
ACA1_145520	mRNA	ACA1_145520	NW_004457245.1	96551	96763	R	ACA1_145520	complement(<96551..>96763)	Acanthamoeba castellanii str. Neff	14911288
ACA1_145530	mRNA	ACA1_145530	NW_004457245.1	96911	97624	R	ACA1_145530	complement(join(<96911..97262,97359..>97624))	Acanthamoeba castellanii str. Neff	14911300
ACA1_145550	mRNA	ACA1_145550	NW_004457245.1	104414	104919	R	ACA1_145550	complement(join(<104414..104601,104865..>104919))	Acanthamoeba castellanii str. Neff	14911334
ACA1_145560	mRNA	ACA1_145560	NW_004457245.1	106332	109263	R	ACA1_145560	complement(join(<106332..106424,106536..106645,106754..106852,106999..107093,107193..107432,107492..107785,107879..108362,108466..108662,108720..108810,108995..109081,109203..>109263))	Acanthamoeba castellanii str. Neff	14911332
ACA1_145570	mRNA	ACA1_145570	NW_004457245.1	109298	113662	R	ACA1_145570	complement(join(<109298..109407,109763..109852,109980..110127,110248..110412,110534..110591,110675..110760,110875..111057,111171..111322,111413..111565,111691..111739,111910..112041,112053..112298,112422..112547,112686..112767,112906..112998,113159..113230,113317..113399,113476..113546,113617..>113662))	Acanthamoeba castellanii str. Neff	14911325
ACA1_145580	mRNA	ACA1_145580	NW_004457245.1	113979	115654	R	ACA1_145580	complement(join(<113979..114182,114310..114409,114485..114691,114773..114939,115017..115144,115235..115386,115416..115525,115589..>115654))	Acanthamoeba castellanii str. Neff	14911347
ACA1_145600	mRNA	ACA1_145600	NW_004457245.1	121351	125625	R	ACA1_145600	complement(join(<121351..121391,121473..121710,121810..121917,122040..122117,122217..122386,122477..122575,122692..122839,122974..123341,123421..123594,123672..123791,123896..124314,124427..124476,124576..124675,124753..124959,125041..125207,125293..125420,125505..>125625))	Acanthamoeba castellanii str. Neff	14911333
ACA1_145710	mRNA	ACA1_145710	NW_004457245.1	126136	128739	R	ACA1_145710	complement(<126136..>128739)	Acanthamoeba castellanii str. Neff	14911328
ACA1_145720	mRNA	ACA1_145720	NW_004457245.1	129053	133037	R	ACA1_145720	complement(join(<129053..129093,129201..129438,129547..129654,129763..129840,129940..130109,130171..130284,130386..130533,130668..131035,131132..131305,131373..131492,131568..132135,132215..133020,133031..>133037))	Acanthamoeba castellanii str. Neff	14911312
ACA1_145730	mRNA	ACA1_145730	NW_004457245.1	133802	134790	R	ACA1_145730	complement(join(<133802..134224,134346..134573,134671..>134790))	Acanthamoeba castellanii str. Neff	14911283
ACA1_145740	mRNA	ACA1_145740	NW_004457245.1	135410	137288	D	ACA1_145740	join(<135410..135574,135641..135709,135796..135849,135976..136267,136371..136490,136621..136844,136932..137045,137118..>137288)	Acanthamoeba castellanii str. Neff	14911282
ACA1_145750	mRNA	ACA1_145750	NW_004457245.1	137423	139896	R	ACA1_145750	complement(join(<137423..137563,137632..137865,138026..138247,138330..138406,138536..138603,138776..138848,138934..139045,139125..139228,139363..139504,139690..>139896))	Acanthamoeba castellanii str. Neff	14911318
ACA1_145760	mRNA	ACA1_145760	NW_004457245.1	140462	144234	R	ACA1_145760	complement(join(<140462..140530,140621..140722,140864..141121,141176..141289,141407..141514,141764..141939,142062..142185,142369..142554,142693..142804,143424..143511,143613..143744,143844..>144234))	Acanthamoeba castellanii str. Neff	14911344
ACA1_145770	mRNA	ACA1_145770	NW_004457245.1	144333	144771	D	ACA1_145770	join(<144333..144341,144595..>144771)	Acanthamoeba castellanii str. Neff	14911343
ACA1_145780	mRNA	ACA1_145780	NW_004457245.1	144919	146726	D	ACA1_145780	join(<144919..145008,145090..145228,145367..145519,145665..145785,145847..145952,146201..146368,146523..>146726)	Acanthamoeba castellanii str. Neff	14911310
ACA1_145790	mRNA	ACA1_145790	NW_004457245.1	147004	149094	D	ACA1_145790	join(<147004..147088,147258..147440,147550..147713,147806..147976,148115..148294,148394..148519,148646..148731,148823..148964,149056..>149094)	Acanthamoeba castellanii str. Neff	14911345
ACA1_145810	mRNA	ACA1_145810	NW_004457245.1	156154	158029	R	ACA1_145810	complement(join(<156154..156232,156310..156527,156615..156812,156989..157096,157218..157696,157765..157894,157994..>158029))	Acanthamoeba castellanii str. Neff	14911294
ACA1_145820	mRNA	ACA1_145820	NW_004457245.1	158272	162532	R	ACA1_145820	complement(join(<158272..158419,158503..158699,158776..158921,158989..159297,159366..159561,159648..159926,160010..160275,160360..160450,160536..160907,160973..161074,161166..161476,161547..161679,161762..162055,162099..162259,162382..>162532))	Acanthamoeba castellanii str. Neff	14911291
ACA1_145830	mRNA	ACA1_145830	NW_004457245.1	164640	165728	D	ACA1_145830	<164640..>165728	Acanthamoeba castellanii str. Neff	14911335
ACA1_145840	mRNA	ACA1_145840	NW_004457245.1	166877	167267	R	ACA1_145840	complement(join(<166877..166972,167049..>167267))	Acanthamoeba castellanii str. Neff	14911295
ACA1_145850	mRNA	ACA1_145850	NW_004457245.1	167367	169036	R	ACA1_145850	complement(join(<167367..167677,167764..167925,168008..168067,168143..168469,168548..168655,168729..168824,168901..>169036))	Acanthamoeba castellanii str. Neff	14911313
ACA1_145880	mRNA	ACA1_145880	NW_004457245.1	173039	175665	D	ACA1_145880	join(<173039..173204,173315..173413,173498..173600,173673..173732,173849..173908,173997..174103,174286..174554,174694..174795,174870..174969,175081..175223,175327..>175665)	Acanthamoeba castellanii str. Neff	14911341
ACA1_145900	mRNA	ACA1_145900	NW_004457245.1	180397	184565	D	ACA1_145900	join(<180397..180451,180547..180717,180794..181601,181731..181887,181974..182311,182411..182562,182633..183079,183171..183279,183361..184177,184250..184403,184468..>184565)	Acanthamoeba castellanii str. Neff	14911339
ACA1_145910	mRNA	ACA1_145910	NW_004457245.1	185147	187356	D	ACA1_145910	join(<185147..185543,185747..186276,186561..186632,186722..186848,186927..187017,187101..>187356)	Acanthamoeba castellanii str. Neff	14911338
ACA1_145920	mRNA	ACA1_145920	NW_004457245.1	187513	190736	R	ACA1_145920	complement(join(<187513..187632,187738..187839,187968..188141,188288..188377,188458..188538,188623..188726,188881..188944,189056..189103,189127..189338,189445..189949,190072..190199,190335..190452,190602..>190736))	Acanthamoeba castellanii str. Neff	14911337
ACA1_145940	mRNA	ACA1_145940	NW_004457245.1	197526	201341	D	ACA1_145940	<197526..>201341	Acanthamoeba castellanii str. Neff	14911289
ACA1_179820	mRNA	ACA1_179820	NW_004457244.1	85	616	D	ACA1_179820	join(<85..159,277..325,414..>616)	Acanthamoeba castellanii str. Neff	14911269
ACA1_179830	mRNA	ACA1_179830	NW_004457244.1	713	1128	D	ACA1_179830	join(<713..1041,1098..>1128)	Acanthamoeba castellanii str. Neff	14911268
ACA1_179940	mRNA	ACA1_179940	NW_004457244.1	2793	3299	D	ACA1_179940	<2793..>3299	Acanthamoeba castellanii str. Neff	14911279
ACA1_179950	mRNA	ACA1_179950	NW_004457244.1	3809	4111	R	ACA1_179950	complement(<3809..>4111)	Acanthamoeba castellanii str. Neff	14911275
ACA1_179960	mRNA	ACA1_179960	NW_004457244.1	7953	10590	R	ACA1_179960	complement(join(<7953..8037,8185..8281,8381..8732,8813..9110,9202..9345,9494..9775,9951..10143,10386..>10590))	Acanthamoeba castellanii str. Neff	14911274
ACA1_179970	mRNA	ACA1_179970	NW_004457244.1	10875	12978	D	ACA1_179970	join(<10875..11109,11307..11482,11671..11779,11913..11975,12150..12240,12339..12494,12616..12721,12922..>12978)	Acanthamoeba castellanii str. Neff	14911278
ACA1_179980	mRNA	ACA1_179980	NW_004457244.1	13140	13664	R	ACA1_179980	complement(join(<13140..13318,13411..13517,13585..>13664))	Acanthamoeba castellanii str. Neff	14911273
ACA1_179990	mRNA	ACA1_179990	NW_004457244.1	14179	14738	D	ACA1_179990	join(<14179..14609,14654..>14738)	Acanthamoeba castellanii str. Neff	14911272
ACA1_180000	mRNA	ACA1_180000	NW_004457244.1	15001	16866	D	ACA1_180000	join(<15001..15050,15123..15249,15346..15418,15560..15648,15755..15901,15972..16233,16313..16419,16519..16580,16683..>16866)	Acanthamoeba castellanii str. Neff	14911277
ACA1_180010	mRNA	ACA1_180010	NW_004457244.1	17051	18114	R	ACA1_180010	complement(join(<17051..17416,17602..>18114))	Acanthamoeba castellanii str. Neff	14911271
ACA1_180020	mRNA	ACA1_180020	NW_004457244.1	18616	24609	D	ACA1_180020	join(<18616..18636,18952..19074,19293..19479,19494..19849,19932..20009,20130..20139,21531..21634,21729..21849,22035..22100,22220..22242,22452..22607,22817..22918,23115..23886,24059..>24609)	Acanthamoeba castellanii str. Neff	14911270
ACA1_180140	mRNA	ACA1_180140	NW_004457244.1	28224	29557	D	ACA1_180140	join(<28224..28352,28506..28610,28822..28926,29068..29141,29292..29363,29470..>29557)	Acanthamoeba castellanii str. Neff	14911267
ACA1_180150	mRNA	ACA1_180150	NW_004457244.1	29740	33301	R	ACA1_180150	complement(join(<29740..29901,30029..30196,30415..30494,30548..30598,30634..30723,30876..31007,31094..31172,31290..31439,31606..31687,31846..32025,32237..32309,32474..32564,32635..32787,32928..33020,33092..>33301))	Acanthamoeba castellanii str. Neff	14911266
ACA1_180160	mRNA	ACA1_180160	NW_004457244.1	33550	35723	D	ACA1_180160	join(<33550..34189,34430..34572,34704..34838,35014..35557,35671..>35723)	Acanthamoeba castellanii str. Neff	14911265
ACA1_180170	mRNA	ACA1_180170	NW_004457244.1	36170	36892	D	ACA1_180170	<36170..>36892	Acanthamoeba castellanii str. Neff	14911264
ACA1_180380	mRNA	ACA1_180380	NW_004457244.1	41551	51005	R	ACA1_180380	complement(join(<41551..41649,41716..41859,42036..42076,42189..42366,42501..42662,42806..43186,43454..43621,43755..43931,44191..45306,45455..45689,45870..46072,46198..46414,46623..46765,46980..47105,47324..47503,47686..47859,48036..48239,48553..48619,48929..49167,49331..49777,49877..49938,50054..50409,50565..50887,50982..>51005))	Acanthamoeba castellanii str. Neff	14911263
ACA1_180590	mRNA	ACA1_180590	NW_004457244.1	51900	62007	R	ACA1_180590	complement(join(<51900..52141,52377..52570,52681..52723,52742..52837,52981..53098,53163..53493,53637..53846,53937..54068,54184..54382,54546..54606,54721..54867,54977..55172,55423..55763,55851..56034,56172..56276,56397..56519,56726..56923,56973..57101,57201..57372,57476..57555,57696..57974,58081..58299,58408..58680,58796..58955,59065..59267,59388..59638,59798..59971,60154..60359,60511..60637,60696..60708,60761..60889,61149..61942,61968..>62007))	Acanthamoeba castellanii str. Neff	14911262
ACA1_180600	mRNA	ACA1_180600	NW_004457244.1	62562	63341	D	ACA1_180600	join(<62562..62668,62739..62822,62892..62961,63080..63182,63325..>63341)	Acanthamoeba castellanii str. Neff	14911261
ACA1_180610	mRNA	ACA1_180610	NW_004457244.1	63574	64746	R	ACA1_180610	complement(join(<63574..63900,63920..63964,64024..64070,64166..64274,64395..64550,64681..>64746))	Acanthamoeba castellanii str. Neff	14911260
ACA1_180620	mRNA	ACA1_180620	NW_004457244.1	64837	66025	R	ACA1_180620	complement(join(<64837..64957,65189..65221,65345..65794,65958..>66025))	Acanthamoeba castellanii str. Neff	14911259
ACA1_180630	mRNA	ACA1_180630	NW_004457244.1	66261	68046	D	ACA1_180630	join(<66261..66497,66667..66847,66950..67116,67227..67561,67710..67804,67952..>68046)	Acanthamoeba castellanii str. Neff	14911258
ACA1_180640	mRNA	ACA1_180640	NW_004457244.1	69486	73002	D	ACA1_180640	join(<69486..69685,69712..69799,69837..69949,70148..70336,70482..70836,70965..71039,71160..71211,71431..71621,71741..71965,72102..72249,72346..72452,72588..72798,72824..>73002)	Acanthamoeba castellanii str. Neff	14911257
ACA1_180650	mRNA	ACA1_180650	NW_004457244.1	73195	73446	R	ACA1_180650	complement(<73195..>73446)	Acanthamoeba castellanii str. Neff	14911256
ACA1_180660	mRNA	ACA1_180660	NW_004457244.1	73665	74128	R	ACA1_180660	complement(join(<73665..73736,73931..>74128))	Acanthamoeba castellanii str. Neff	14911255
ACA1_180770	mRNA	ACA1_180770	NW_004457244.1	76099	77400	D	ACA1_180770	join(<76099..76153,76265..76328,76439..76507,76599..76725,76871..77005,77071..77136,77239..>77400)	Acanthamoeba castellanii str. Neff	14911254
ACA1_180780	mRNA	ACA1_180780	NW_004457244.1	78169	81006	R	ACA1_180780	complement(join(<78169..78245,78384..78519,78608..78808,78941..79046,79152..79330,79458..79683,79809..79947,80074..80647,80777..80965,80995..>81006))	Acanthamoeba castellanii str. Neff	14911253
ACA1_180790	mRNA	ACA1_180790	NW_004457244.1	82165	82700	R	ACA1_180790	complement(join(<82165..82255,82352..82475,82610..82670,82683..>82700))	Acanthamoeba castellanii str. Neff	14911252
ACA1_180800	mRNA	ACA1_180800	NW_004457244.1	83117	84892	R	ACA1_180800	complement(join(<83117..84441,84594..84795,84866..>84892))	Acanthamoeba castellanii str. Neff	14911251
ACA1_180820	mRNA	ACA1_180820	NW_004457244.1	102516	107765	D	ACA1_180820	join(<102516..102559,102835..103018,103137..103243,103376..103517,103602..103664,103785..103982,104073..104209,104324..104465,104624..104708,104856..104960,105035..105132,105235..105411,105509..105625,105760..105907,105979..106357,106454..106724,106850..107011,107100..107431,107507..>107765)	Acanthamoeba castellanii str. Neff	14911249
ACA1_180830	mRNA	ACA1_180830	NW_004457244.1	107860	110402	R	ACA1_180830	complement(join(<107860..108414,108520..108642,108749..108858,109074..109175,109339..109424,109543..109645,109758..109848,109962..110149,110279..>110402))	Acanthamoeba castellanii str. Neff	14911248
ACA1_180940	mRNA	ACA1_180940	NW_004457244.1	110743	115129	R	ACA1_180940	complement(join(<110743..111318,111419..111541,111639..111748,111850..111951,112061..112146,112265..112367,112458..112548,112665..112852,112979..113200,113297..113665,113758..113895,113960..114082,114194..114338,114421..114604,114700..114814,114988..>115129))	Acanthamoeba castellanii str. Neff	14911247
ACA1_180950	mRNA	ACA1_180950	NW_004457244.1	119208	120306	D	ACA1_180950	join(<119208..119320,119375..119529,119603..120018,120130..120150,120259..>120306)	Acanthamoeba castellanii str. Neff	14911246
ACA1_181160	mRNA	ACA1_181160	NW_004457244.1	128446	129745	R	ACA1_181160	complement(join(<128446..129082,129168..>129745))	Acanthamoeba castellanii str. Neff	14911245
ACA1_181170	mRNA	ACA1_181170	NW_004457244.1	133733	134464	R	ACA1_181170	complement(<133733..>134464)	Acanthamoeba castellanii str. Neff	14911244
ACA1_181180	mRNA	ACA1_181180	NW_004457244.1	134788	134908	D	ACA1_181180	join(<134788..134890,134901..>134908)	Acanthamoeba castellanii str. Neff	14911243
ACA1_181190	mRNA	ACA1_181190	NW_004457244.1	135425	136109	D	ACA1_181190	join(<135425..135819,135887..>136109)	Acanthamoeba castellanii str. Neff	14911242
ACA1_181200	mRNA	ACA1_181200	NW_004457244.1	141816	143882	D	ACA1_181200	join(<141816..141992,142368..142488,142864..143098,143365..143435,143668..>143882)	Acanthamoeba castellanii str. Neff	14911281
ACA1_181210	mRNA	ACA1_181210	NW_004457244.1	146757	149466	R	ACA1_181210	complement(join(<146757..146889,146970..147079,147181..147444,147643..147707,147814..148021,148109..148897,149003..149089,149404..>149466))	Acanthamoeba castellanii str. Neff	14911280
ACA1_181220	mRNA	ACA1_181220	NW_004457244.1	150085	150795	D	ACA1_181220	join(<150085..150185,150257..150332,150421..150507,150592..>150795)	Acanthamoeba castellanii str. Neff	14911241
ACA1_181230	mRNA	ACA1_181230	NW_004457244.1	150879	154126	R	ACA1_181230	complement(join(<150879..151023,151138..151345,151447..151504,151582..151704,151791..152067,152133..152262,152338..152509,152647..152755,152864..152939,153025..153121,153222..153272,153367..153485,153594..153694,153800..153885,153983..>154126))	Acanthamoeba castellanii str. Neff	14911237
ACA1_181240	mRNA	ACA1_181240	NW_004457244.1	154289	155831	D	ACA1_181240	join(<154289..154370,154443..154510,154668..154901,155008..155064,155169..155188,155267..155394,155500..>155831)	Acanthamoeba castellanii str. Neff	14911240
ACA1_181250	mRNA	ACA1_181250	NW_004457244.1	155888	158009	R	ACA1_181250	complement(join(<155888..156258,156339..156513,156629..157137,157245..157598,157747..157850,157954..>158009))	Acanthamoeba castellanii str. Neff	14911236
ACA1_181260	mRNA	ACA1_181260	NW_004457244.1	158152	158800	R	ACA1_181260	complement(join(<158152..158446,158518..158634,158658..>158800))	Acanthamoeba castellanii str. Neff	14911239
ACA1_181280	mRNA	ACA1_181280	NW_004457244.1	163865	165063	D	ACA1_181280	join(<163865..163879,163912..164268,164506..164608,164648..164679,164860..>165063)	Acanthamoeba castellanii str. Neff	14911238
ACA1_022040	mRNA	ACA1_022040	NW_004457243.1	973	2211	D	ACA1_022040	join(<973..1073,1206..1461,1484..1566,1699..1839,1929..>2211)	Acanthamoeba castellanii str. Neff	14911234
ACA1_022050	mRNA	ACA1_022050	NW_004457243.1	2627	3460	R	ACA1_022050	complement(<2627..>3460)	Acanthamoeba castellanii str. Neff	14911233
ACA1_022070	mRNA	ACA1_022070	NW_004457243.1	8987	11183	R	ACA1_022070	complement(join(<8987..9159,9444..9515,9585..9686,9758..9883,9941..10009,10082..10249,10316..10419,10503..10647,10844..10919,11052..>11183))	Acanthamoeba castellanii str. Neff	14911231
ACA1_022080	mRNA	ACA1_022080	NW_004457243.1	11854	15136	D	ACA1_022080	join(<11854..12058,12187..12378,12500..12960,13090..13271,13419..13998,14108..14284,14349..14495,14596..14713,14819..14920,15006..>15136)	Acanthamoeba castellanii str. Neff	14911230
ACA1_107750	mRNA	ACA1_107750	NW_004457242.1	34	162	R	ACA1_107750	complement(<34..>162)	Acanthamoeba castellanii str. Neff	14911219
ACA1_107760	mRNA	ACA1_107760	NW_004457242.1	428	852	R	ACA1_107760	complement(join(<428..597,828..>852))	Acanthamoeba castellanii str. Neff	14911204
ACA1_107870	mRNA	ACA1_107870	NW_004457242.1	2061	3437	R	ACA1_107870	complement(join(<2061..2230,2316..2414,2494..2563,2649..2744,2828..2896,2980..3066,3150..3293,3402..>3437))	Acanthamoeba castellanii str. Neff	14911189
ACA1_107980	mRNA	ACA1_107980	NW_004457242.1	5266	5860	R	ACA1_107980	complement(join(<5266..5359,5458..5560,5707..5745,5806..>5860))	Acanthamoeba castellanii str. Neff	14911181
ACA1_108090	mRNA	ACA1_108090	NW_004457242.1	6650	10470	D	ACA1_108090	join(<6650..6740,6765..7027,7116..7741,10233..>10470)	Acanthamoeba castellanii str. Neff	14911229
ACA1_108200	mRNA	ACA1_108200	NW_004457242.1	10538	11870	R	ACA1_108200	complement(join(<10538..10738,10869..11050,11112..11256,11343..>11870))	Acanthamoeba castellanii str. Neff	14911221
ACA1_108210	mRNA	ACA1_108210	NW_004457242.1	12052	16430	R	ACA1_108210	complement(join(<12052..12839,12930..13027,13090..13246,13335..13418,13523..13631,13706..13848,13929..14062,14224..14360,14430..14769,14868..14938,15024..15134,15237..15656,15723..15817,15834..15871,15895..>16430))	Acanthamoeba castellanii str. Neff	14911217
ACA1_108220	mRNA	ACA1_108220	NW_004457242.1	16833	18032	D	ACA1_108220	join(<16833..17262,17337..17705,17794..>18032)	Acanthamoeba castellanii str. Neff	14911226
ACA1_108230	mRNA	ACA1_108230	NW_004457242.1	18243	20142	R	ACA1_108230	complement(join(<18243..18454,18536..18908,18996..19171,19245..19480,19633..19764,19967..>20142))	Acanthamoeba castellanii str. Neff	14911222
ACA1_108240	mRNA	ACA1_108240	NW_004457242.1	20454	21212	R	ACA1_108240	complement(join(<20454..21032,21114..>21212))	Acanthamoeba castellanii str. Neff	14911180
ACA1_108250	mRNA	ACA1_108250	NW_004457242.1	21685	22443	D	ACA1_108250	join(<21685..21715,21785..21846,21904..>22443)	Acanthamoeba castellanii str. Neff	14911183
ACA1_108260	mRNA	ACA1_108260	NW_004457242.1	22573	24588	R	ACA1_108260	complement(join(<22573..22710,22797..22958,23030..23165,23239..23407,23501..23593,23679..23738,23803..23922,24013..24195,24263..24335,24408..24517,24531..>24588))	Acanthamoeba castellanii str. Neff	14911184
ACA1_108270	mRNA	ACA1_108270	NW_004457242.1	25111	29044	D	ACA1_108270	join(<25111..25546,25648..25774,25858..25987,26075..26215,26315..26399,26484..26603,26696..26793,26869..26977,27057..27197,27286..27421,27494..27630,27719..27858,27943..28038,28105..28229,28325..28478,28574..28632,28740..28799,28903..>29044)	Acanthamoeba castellanii str. Neff	14911187
ACA1_108280	mRNA	ACA1_108280	NW_004457242.1	29298	29699	D	ACA1_108280	join(<29298..29429,29502..>29699)	Acanthamoeba castellanii str. Neff	14911197
ACA1_108290	mRNA	ACA1_108290	NW_004457242.1	30221	31229	R	ACA1_108290	complement(join(<30221..30348,30415..30497,30582..30683,30765..30826,30897..31013,31074..>31229))	Acanthamoeba castellanii str. Neff	14911178
ACA1_108300	mRNA	ACA1_108300	NW_004457242.1	31458	33077	D	ACA1_108300	join(<31458..31529,31832..31883,31954..32169,32238..32304,32388..32476,32538..32647,32732..32833,32910..>33077)	Acanthamoeba castellanii str. Neff	14911191
ACA1_108420	mRNA	ACA1_108420	NW_004457242.1	36500	37230	D	ACA1_108420	join(<36500..36520,36587..36700,36841..36928,37008..37068,37146..>37230)	Acanthamoeba castellanii str. Neff	14911225
ACA1_108530	mRNA	ACA1_108530	NW_004457242.1	39051	42023	R	ACA1_108530	complement(join(<39051..39169,39245..39319,39405..39480,39605..40667,40950..41233,41463..41488,41783..>42023))	Acanthamoeba castellanii str. Neff	14911186
ACA1_108540	mRNA	ACA1_108540	NW_004457242.1	42508	42943	R	ACA1_108540	complement(join(<42508..42783,42857..>42943))	Acanthamoeba castellanii str. Neff	14911192
ACA1_108550	mRNA	ACA1_108550	NW_004457242.1	42965	44102	R	ACA1_108550	complement(join(<42965..43074,43132..43177,43302..43576,44084..>44102))	Acanthamoeba castellanii str. Neff	14911202
ACA1_108560	mRNA	ACA1_108560	NW_004457242.1	45729	46772	D	ACA1_108560	join(<45729..45866,45994..46076,46128..46230,46297..46511,46637..>46772)	Acanthamoeba castellanii str. Neff	14911207
ACA1_108570	mRNA	ACA1_108570	NW_004457242.1	48110	50389	D	ACA1_108570	join(<48110..48317,48382..48620,49108..49584,49642..49929,49991..>50389)	Acanthamoeba castellanii str. Neff	14911223
ACA1_108580	mRNA	ACA1_108580	NW_004457242.1	50640	51145	R	ACA1_108580	complement(join(<50640..50794,50883..50971,51006..>51145))	Acanthamoeba castellanii str. Neff	14911228
ACA1_108600	mRNA	ACA1_108600	NW_004457242.1	53849	62644	D	ACA1_108600	join(<53849..53986,54071..54261,54340..54447,54519..54579,54675..54768,54930..54998,55119..55225,55306..55435,55539..55687,55790..55909,56004..56093,56171..56253,56327..56669,56747..56871,56942..57065,57193..57297,57380..57444,57527..57584,57742..58169,58245..58398,58489..58697,58802..59211,59547..59721,59824..59925,60055..60157,60265..60330,60451..60557,60679..60793,60900..60958,61045..61166,61303..61418,61491..61530,61653..62030,62126..62225,62301..62448,62555..>62644)	Acanthamoeba castellanii str. Neff	14911193
ACA1_108610	mRNA	ACA1_108610	NW_004457242.1	62737	64659	D	ACA1_108610	join(<62737..62799,62931..62978,63114..63278,63490..63624,63727..63772,64083..64182,64262..64409,64504..>64659)	Acanthamoeba castellanii str. Neff	14911194
ACA1_108720	mRNA	ACA1_108720	NW_004457242.1	64696	66662	D	ACA1_108720	join(<64696..64900,65019..65125,65221..65289,65423..65470,65592..65713,65850..65994,66097..66199,66326..66420,66519..>66662)	Acanthamoeba castellanii str. Neff	14911211
ACA1_108730	mRNA	ACA1_108730	NW_004457242.1	66772	67767	R	ACA1_108730	complement(join(<66772..66985,67081..67249,67324..67391,67458..67587,67698..>67767))	Acanthamoeba castellanii str. Neff	14911188
ACA1_108740	mRNA	ACA1_108740	NW_004457242.1	67866	69055	R	ACA1_108740	complement(join(<67866..67975,68043..68146,68231..68312,68416..68489,68575..68641,68683..68749,68774..68830,68996..>69055))	Acanthamoeba castellanii str. Neff	14911201
ACA1_108750	mRNA	ACA1_108750	NW_004457242.1	70141	72649	R	ACA1_108750	complement(join(<70141..70560,70738..71205,71410..71856,72055..72257,72580..>72649))	Acanthamoeba castellanii str. Neff	14911224
ACA1_108760	mRNA	ACA1_108760	NW_004457242.1	73101	74845	R	ACA1_108760	complement(join(<73101..74357,74552..>74845))	Acanthamoeba castellanii str. Neff	14911200
ACA1_108770	mRNA	ACA1_108770	NW_004457242.1	75705	77566	D	ACA1_108770	join(<75705..75969,76055..76194,76313..76522,76606..76802,76870..76967,77096..77259,77351..>77566)	Acanthamoeba castellanii str. Neff	14911210
ACA1_108780	mRNA	ACA1_108780	NW_004457242.1	78083	80212	D	ACA1_108780	join(<78083..78304,78466..78646,78695..78753,78775..78892,78983..79088,79170..79245,79356..79481,79560..79639,79745..79955,80048..>80212)	Acanthamoeba castellanii str. Neff	14911214
ACA1_108790	mRNA	ACA1_108790	NW_004457242.1	80489	80794	D	ACA1_108790	join(<80489..80548,80612..>80794)	Acanthamoeba castellanii str. Neff	14911185
ACA1_108800	mRNA	ACA1_108800	NW_004457242.1	81160	82353	D	ACA1_108800	join(<81160..81228,81310..81487,81585..81754,81844..82054,82142..>82353)	Acanthamoeba castellanii str. Neff	14911218
ACA1_108810	mRNA	ACA1_108810	NW_004457242.1	82492	88072	R	ACA1_108810	complement(join(<82492..82620,82647..82682,82720..82862,82998..83134,83238..83496,83592..83741,83851..84034,84162..84293,84402..84449,84591..85075,85202..85282,85473..85626,85720..85848,85944..86045,86144..86188,86281..86610,86683..87009,87198..87266,87390..87554,87625..87753,87989..>88072))	Acanthamoeba castellanii str. Neff	14911198
ACA1_108820	mRNA	ACA1_108820	NW_004457242.1	88767	89287	D	ACA1_108820	join(<88767..89101,89224..>89287)	Acanthamoeba castellanii str. Neff	14911203
ACA1_108830	mRNA	ACA1_108830	NW_004457242.1	89830	94046	D	ACA1_108830	join(<89830..89979,90135..90273,90409..90517,90669..90816,90902..91004,91109..91212,91306..91417,91837..91955,92067..92192,92299..92421,92524..92620,92721..92769,92857..93002,93093..93198,93284..93343,93435..93594,93674..93920,93997..>94046)	Acanthamoeba castellanii str. Neff	14911216
ACA1_108840	mRNA	ACA1_108840	NW_004457242.1	94129	96509	R	ACA1_108840	complement(join(<94129..94312,94375..94464,94558..94663,94742..94849,94932..95092,95226..95288,95300..95744,95793..96001,96075..96168,96249..96331,96403..>96509))	Acanthamoeba castellanii str. Neff	14911220
ACA1_108860	mRNA	ACA1_108860	NW_004457242.1	99071	99729	R	ACA1_108860	complement(join(<99071..99178,99245..99334,99427..99528,99622..>99729))	Acanthamoeba castellanii str. Neff	14911190
ACA1_108970	mRNA	ACA1_108970	NW_004457242.1	104491	105728	D	ACA1_108970	join(<104491..104666,104762..105171,105288..105462,105567..>105728)	Acanthamoeba castellanii str. Neff	14911199
ACA1_109080	mRNA	ACA1_109080	NW_004457242.1	109970	111777	D	ACA1_109080	join(<109970..110008,110102..110315,110414..110865,110942..111027,111120..111564,111640..>111777)	Acanthamoeba castellanii str. Neff	14911179
ACA1_109090	mRNA	ACA1_109090	NW_004457242.1	111938	113876	R	ACA1_109090	complement(join(<111938..113031,113115..113268,113355..>113876))	Acanthamoeba castellanii str. Neff	14911213
ACA1_109100	mRNA	ACA1_109100	NW_004457242.1	114034	116727	R	ACA1_109100	complement(join(<114034..114327,114418..114579,114654..114857,114939..115118,115185..115282,115350..115401,115477..115591,115668..115761,115852..115886,115960..116146,116224..116418,116511..>116727))	Acanthamoeba castellanii str. Neff	14911196
ACA1_109110	mRNA	ACA1_109110	NW_004457242.1	116920	119144	D	ACA1_109110	join(<116920..117088,117186..117316,117442..117651,117737..117930,118005..118102,118180..118343,118431..118559,118642..118710,118818..118945,119048..>119144)	Acanthamoeba castellanii str. Neff	14911215
ACA1_109120	mRNA	ACA1_109120	NW_004457242.1	119342	121147	R	ACA1_109120	complement(<119342..>121147)	Acanthamoeba castellanii str. Neff	14911195
ACA1_109130	mRNA	ACA1_109130	NW_004457242.1	121943	127953	D	ACA1_109130	join(<121943..123442,123576..124670,124766..124882,124983..125288,125382..127105,127198..127620,127713..>127953)	Acanthamoeba castellanii str. Neff	14911205
ACA1_109140	mRNA	ACA1_109140	NW_004457242.1	129881	132121	D	ACA1_109140	join(<129881..130568,130669..130830,130920..131084,131163..131378,131470..131616,131738..131918,132001..>132121)	Acanthamoeba castellanii str. Neff	14911209
ACA1_109250	mRNA	ACA1_109250	NW_004457242.1	136015	137198	D	ACA1_109250	join(<136015..136042,136873..>137198)	Acanthamoeba castellanii str. Neff	14911208
ACA1_109360	mRNA	ACA1_109360	NW_004457242.1	142419	143741	R	ACA1_109360	complement(join(<142419..142511,142693..142836,142909..143028,143117..143172,143494..143626,143694..>143741))	Acanthamoeba castellanii str. Neff	14911212