-- dump date   	20250517_150931
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YALI1_A00058g	Compare to YALI0A00110g, weakly similar to uniprot|Q06593 Saccharomyces cerevisiae YPR194c OPT2
YALI1_A00102g	Compare to YALI0A00132g, highly similar to uniprot|P40150 Saccharomyces cerevisiae YNL209w SSB2 heat shock protein of HSP70 family cytosolic
YALI1_A00148g	Compare to YALI0A00154g, similar to DEHA0A00572g Debaryomyces hansenii IPF 30.1, similar to Saccharomyces cerevisiae YKL077W; ancestral locus Anc_2.624
YALI1_A00204g	Truncated form of YALI0A00176g, weakly similar to uniprot|P08640 Saccharomyces cerevisiae YIR019c STA1 extracellular alpha-1 4-glucan glucosidase
YALI1_A00241g	Compare to YALI0A00198g, similar to YALI-IPF6987.1 Yarrowia lipolytica YALI0C21912g Unknown function
YALI1_A00252g	Truncated form of YALI0A00212g, no similarity
YALI1_A00309g	Compare to YALI0A00264g, similar to Saccharomyces cerevisiae ILS1 (YBL076C); ancestral locus Anc_7.398, similar to uniprot|P09436 Saccharomyces cerevisiae YBL076c ILS1 isoleucyl-tRNA synthetase
YALI1_A00325g	Compare to YALI0A00286g, highly similar to uniprot|P39729 Saccharomyces cerevisiae YAL036c FUN11 probable GTP-binding protein
YALI1_A00375g	Compare to YALI0A00330g, weakly similar to uniprot|P08432 Saccharomyces cerevisiae YKL184w ORD1 ornithine decarboxylase
YALI1_A00406g	Compare to YALI0A00352g, highly similar to uniprot|P32324 Saccharomyces cerevisiae YOR133w EFT1 and highly similar to uniprot|P32324 Saccharomyces cerevisiae YDR385W translation elongation factor eEF2
YALI1_A00447g	Compare to YALI0A00369g, similar to Saccharomyces cerevisiae MUM2 (YBR057C); ancestral locus Anc_3.269, weakly similar to uniprot|P38236 Saccharomyces cerevisiae YBR057c MUM2: meiotic protein
YALI1_A00468g	Truncated form of YALI0A00374g, weakly similar to uniprot|Q6C2I9 Yarrowia lipolytica YALI0E01210g
YALI1_A00504g	Compare to YALI0A00396g, some similarities with uniprot|Q8J174 Emericella nidulans RfeF
YALI1_A00538g	Compare to YALI0A00418g, weakly similar to uniprot|Q08777 Saccharomyces cerevisiae YOR306c similarity to human X-linked PEST- containing transporter
YALI1_A00558g	Compare to YALI0A00440g, similar to Saccharomyces cerevisiae FUN14 (YAL008W); ancestral locus Anc_7.107, similar to CAGL0C02739g Candida glabrata IPF 1020.1
YALI1_A00601g	Compare to YALI0A00506g, similar to Saccharomyces cerevisiae ALK2 (YBL009W) and ALK1 (YGL021W); ancestral locus Anc_4.100, weakly similar to uniprot|P43633 Saccharomyces cerevisiae YGL021w ALK1 DNA damage-responsive protein
YALI1_A00661g	Compare to YALI0A00528g, weakly similar to uniprot|P53389 Saccharomyces cerevisiae YNR055c HOL1 member of major facilitator superfamily multidrug-resistance protein subfamily
YALI1_A00683g	Compare to YALI0A00550g, similar to uniprot|Q6C2C4 Yarrowia lipolytica YALI0F09031g
YALI1_A00715g	Compare to YALI0A00572g, weakly similar to uniprot|P47179 Saccharomyces cerevisiae YJR151c
YALI1_A00746g	Compare to YALI0A00594g, similar to uniprot|P32527 Saccharomyces cerevisiae YGR285c ZUO1 zuotin a putative Z-DNA binding protein, similar to Saccharomyces cerevisiae ZUO1 (YGR285C); ancestral locus Anc_5.4
YALI1_A00789g	Compare to YALI0A00616g, similar to uniprot|P47037 Saccharomyces cerevisiae YJL074c SMC3 required for structural maintenance of chromosomes, similar to Saccharomyces cerevisiae SMC3 (YJL074C); ancestral locus Anc_1.295
YALI1_A00801g	Compare to YALI0A00638g, similar to uniprot|P38340 Saccharomyces cerevisiae YBR261c, similar to Saccharomyces cerevisiae YBR261C; ancestral locus Anc_1.341
YALI1_A00829g	Compare to YALI0A00660g, weakly similar to uniprot|Q12218 Saccharomyces cerevisiae YOR009w
YALI1_A00867g	Compare to YALI0A00682g, no similarity
YALI1_A00947g	Truncated form of YALI0A00759g, weakly similar to uniprot|P17442 Saccharomyces cerevisiae YGR233c PHO81 cyclin-dependent kinase inhibitor
YALI1_A00983g	Compare to YALI0A00781g, similar to Saccharomyces cerevisiae PLP1 (YDR183W); ancestral locus Anc_8.385, similar to uniprot|Q04004 Saccharomyces cerevisiae YDR183w PLP1 Phosducin homologue likely to be involved in regulation of pheromone response
YALI1_A01061g	Compare to YALI0A00803g, similar to uniprot|P39730 Saccharomyces cerevisiae YAL035w FUN12 general translation factor eIF2 homolog, similar to Saccharomyces cerevisiae FUN12 (YAL035W); ancestral locus Anc_7.50
YALI1_A01093g	Truncated form of YALI0A00825g, weakly similar to DEHA0E12342g Debaryomyces hansenii IPF 11939.1
YALI1_A01122g	Compare to YALI0A00847g, similar to uniprot|O59826 Schizosaccharomyces pombe Putative potassium channel subunit
YALI1_A01143g	Compare to YALI0A00869g, some similarities with uniprot|P53322 Saccharomyces cerevisiae YGR260w TNA1 similarity to allantoate transport protein
YALI1_A01173g	Truncated form of YALI0A00891g, uniprot|Q96X25 Yarrowia lipolytica Serine/threonine phosphatase Pph21p (EC 3.1.3.16) (Serine/threonine protein phosphatase)
YALI1_A01198g	Compare to YALI0A00913g, weakly similar to uniprot|P40009 Saccharomyces cerevisiae YER005w YND1 Yeast Nucleoside Diphosphatase
YALI1_A01240g	Compare to YALI0A00935g, no similarity
YALI1_A01249g	Compare to YALI0A00957g, similar to Q8U8U2 Agrobacterium tumefaciens putative acetyl transferase
YALI1_A01267g	Compare to YALI0A00979g, similar to Saccharomyces cerevisiae ZRT3 (YKL175W); ancestral locus Anc_1.172, similar to uniprot|P34240 Saccharomyces cerevisiae YKL175w ZRT3 vacuolar membrane protein involved in the regulation of zinc storage
YALI1_A01298g	Compare to YALI0A01001g, similar to Saccharomyces cerevisiae VPH2 (YKL119C); ancestral locus Anc_2.453, weakly similar to uniprot|P32341 Saccharomyces cerevisiae YKL119c VPH2 H+-ATPase assembly protein
YALI1_A01394g	Compare to YALI0A01023g, similar to uniprot|Q12691 Saccharomyces cerevisiae YDR038c ENA5 P-type ATPase involved in Na+ efflux
YALI1_A01468g	Compare to YALI0A01045g, similar to uniprot|P36151 Saccharomyces cerevisiae YKR070w putative phosphatidyl synthase, similar to Saccharomyces cerevisiae YKR070W; ancestral locus Anc_5.652
YALI1_A01505g	Compare to YALI0A01067g, similar to Saccharomyces cerevisiae YOR052C; ancestral locus Anc_5.653, weakly similar to uniprot|Q08422 Saccharomyces cerevisiae Chromosome XV reading frame ORF YOR052C
YALI1_A01537g	Truncated form of YALI0A01089g, similar to uniprot|Q6C3Z6 Yarrowia lipolytica YALI0E31031g
YALI1_A01577g	Compare to YALI0A01111g, similar to DEHA0D16709g Debaryomyces hansenii
YALI1_A01602g	Compare to YALI0A01133g, similar to Saccharomyces cerevisiae MET1 (YKR069W); ancestral locus Anc_5.651, similar to uniprot|P36150 Saccharomyces cerevisiae YKR069w MET1 siroheme synthase
YALI1_A01628g	Compare to YALI0A01155g, weakly similar to uniprot|Q89ET9 Bradyrhizobium japonicum Blr6983 protein
YALI1_A01670g	Compare to YALI0A01265g, weakly similar to KLLA0B07887g Kluyveromyces lactis IPF 7358.1
YALI1_A01717g	Compare to YALI0A01331g, similar to uniprot|P39984 Saccharomyces cerevisiae YEL056w HAT2
YALI1_A01766g	Compare to YALI0A01353g, similar to uniprot|P29496 Saccharomyces cerevisiae YLR274w CDC46 cell division control protein, similar to Saccharomyces cerevisiae CDC46 (YLR274W); ancestral locus Anc_6.71
YALI1_A01777g	Compare to YALI0A01375g, similar to Saccharomyces cerevisiae ASF1 (YJL115W); ancestral locus Anc_1.242, similar to uniprot|P32447 Saccharomyces cerevisiae YJL115w ASF1 anti-silencing protein
YALI1_A01794g	Compare to YALI0A01397g, weakly similar to uniprot|Q9V3C5 Drosophila melanogaster BCDNA:GH03694 protein
YALI1_A01824g	Compare to YALI0A01419g, uniprot|Q6CI60 Yarrowia lipolytica YALI0A01419g NADH- ubiquinone oxidoreductase 21.3 kDa accessory subunit
YALI1_A01842g	Compare to YALI0A01441g, weakly similar to uniprot|Q16764 Homo sapiens Epoxide hydrolase (EC 3.3.2.3)
YALI1_A01864g	Compare to YALI0A01452g, similar to Saccharomyces cerevisiae YHR138C; ancestral locus Anc_2.100,gnl|GLV|YALI0A01452g [Yarrowia lipolytica] weakly similar to uniprot|P38841 hypothetical protein YHR138c - yeast (Saccharomyces cerevisiae)
YALI1_A01888g	Compare to YALI0A01463g, no similarity
YALI1_A01905g	Compare to YALI0A01485g, similar to uniprot|Q02899 Saccharomyces pastorianus NADPH dehydrogenase 1 (EC 1.6.99.1) (Old yellow enzyme 1)
YALI1_A02037g	Compare to YALI0A01650g, similar to uniprot|Q6CDB7 Yarrowia lipolytica YALI0C01925g Unknown function
YALI1_A02075g	Compare to YALI0A01716g, weakly similar to uniprot|Q6C797 Yarrowia lipolytica YALI0E02596g
YALI1_A02083g	Compare to YALI0A01738g, similar to Saccharomyces cerevisiae GIM3 (YNL153C); ancestral locus Anc_2.101, similar to uniprot|P53900 Saccharomyces cerevisiae YNL153c GIM3 Gim complex
YALI1_A02096g	Compare to YALI0A01760g, weakly similar to uniprot|Q9XBG6 Bradyrhizobium japonicum YaeN protein
YALI1_A02131g	Compare to YALI0A01782g, weakly similar to uniprot|P32357 Saccharomyces cerevisiae YBL074c AAR2 A1 cistron splicing factor, similar to Saccharomyces cerevisiae AAR2 (YBL074C); ancestral locus Anc_7.396
YALI1_A02150g	Compare to YALI0A01826g, weakly similar to DEHA0C16203g Debaryomyces hansenii IPF 3466.1
YALI1_A02190g	Compare to YALI0A01848g, weakly similar to uniprot|Q6C8F9 Yarrowia lipolytica YALI0D19998g
YALI1_A02198g	Truncated form of YALI0A01870g, similar to uniprot|P29029 Saccharomyces cerevisiae YLR286C Endochitinase precursor (EC 3.2.1.14 Soluble cell wall protein 2)
YALI1_A02263g	Compare to YALI0A01892g, weakly similar to uniprot|P47179 Saccharomyces cerevisiae YJR151C
YALI1_A02335g	Compare to YALI0A01958g, weakly similar to uniprot|P40886 Saccharomyces cerevisiae YJL214w HXT8 hexose transport protein
YALI1_A02365g	Compare to YALI0A01980g, similar to Saccharomyces cerevisiae REC8 (YPR007C); ancestral locus Anc_8.104, weakly similar to DEHA-IPF1537.1 Debaryomyces hansenii unknown function
YALI1_A02394g	Compare to YALI0A02002g, weakly similar to uniprot|Q12303 Saccharomyces cerevisiae YLR121c YPS3 GPI-anchored aspartyl protease 3 (yapsin 3)
YALI1_A02426g	Compare to YALI0A02024g, similar to uniprot|Q6CFJ3 Yarrowia lipolytica YALI0B06490g
YALI1_A02443g	Compare to YALI0A02046g, weakly similar to uniprot|Q02207 Saccharomyces cerevisiae YKR009c FOX2 hydratase-dehydrogenase-epimerase peroxisomal
YALI1_A02461g	Compare to YALI0A02068g, similar to Saccharomyces cerevisiae RFC3 (YNL290W); ancestral locus Anc_3.69, similar to uniprot|P38629 Saccharomyces cerevisiae YNL290w RFC3 DNA replication factor C 40 kDa subunit
YALI1_A02470g	Compare to YALI0A02090g, similar to Saccharomyces cerevisiae MID1 (YNL291C); ancestral locus Anc_3.68, some similarities with uniprot|P26754 Saccharomyces cerevisiae YNL312w RFA2 DNA replication factor A 36 kDa subunit
YALI1_A02499g	Compare to YALI0A02112g, similar to Saccharomyces cerevisiae YBR269C; ancestral locus Anc_1.320, similar to KLLA0F01639g Kluyveromyces lactis IPF 1842.1
YALI1_A02546g	Compare to YALI0A02134g, similar to Saccharomyces cerevisiae NUP82 (YJL061W); ancestral locus Anc_1.319, weakly similar to uniprot|P14907 Saccharomyces cerevisiae YJL041w NSP1 nuclear pore protein
YALI1_A02552g	Compare to YALI0A02156g, no similarity
YALI1_A02561g	Compare to YALI0A02178g, similar to Saccharomyces cerevisiae POP7 (YBR167C); ancestral locus Anc_8.593, similar to uniprot|P38291 Saccharomyces cerevisiae YBR167c POP7 nuclear Ribonucleases P/MRP protein subunit POP7
YALI1_A02568g	Compare to YALI0A02200g, similar to Saccharomyces cerevisiae CUL3 (YGR003W); ancestral locus Anc_4.138, weakly similar to uniprot|O14122 Schizosaccharomyces pombe Cullin 4 homolog (Cul-4)
YALI1_A02615g	Compare to YALI0A02222g, weakly similar to uniprot|P38339 Saccharomyces cerevisiae YBR260c RGD1 similarity to C.elegans GTPase- activating protein
YALI1_A02653g	Compare to YALI0A02244g, weakly similar to uniprot|P41948 Saccharomyces cerevisiae YNL142w MEP2 high affinity low capacity ammonia permease
YALI1_A02682g	Compare to YALI0A02266g, weakly similar to uniprot|Q6CFK0 Yarrowia lipolytica YALI0E24255g transposon Mutyl MudrA
YALI1_A02728g	Compare to YALI0A02288g, weakly similar to wi|NCU09374.1 Neurospora crassa NCU09374.1 hypothetical protein
YALI1_A02775g	Compare to YALI0A02310g, highly similar to uniprot|P32861 Saccharomyces cerevisiae YKL035w UGP1 UTP--glucose-1-phosphate uridylyltransferase, similar to Saccharomyces cerevisiae YHL012W and UGP1 (YKL035W); ancestral locus Anc_2.546
YALI1_A02813g	Compare to YALI0A02332g, no similarity
YALI1_A02833g	Compare to YALI0A02354g, similar to uniprot|Q02201 Saccharomyces cerevisiae YKR003w, similar to Saccharomyces cerevisiae OSH7 (YHR001W) and OSH6 (YKR003W); ancestral locus Anc_2.513
YALI1_A02895g	Compare to YALI0A02409g, weakly similar to ca|CA0277|CaRNH1 Candida albicans ribonuclease H (by homology)
YALI1_A02947g	Compare to YALI0A02431g, similar to Saccharomyces cerevisiae ECM9 (YKR004C); ancestral locus Anc_2.514, weakly similar to uniprot|Q02202 Saccharomyces cerevisiae YKR004c Hypothetical 34.5 kDa protein
YALI1_A02974g	Compare to YALI0A02453g, weakly similar to uniprot|P42951 Saccharomyces cerevisiae YJL100W Hypothetical 70.2 kDa protein in GSH1- CHS6 intergenic region, similar to Saccharomyces cerevisiae LSB6 (YJL100W); ancestral locus Anc_1.266
YALI1_A02998g	Compare to YALI0A02475g, no similarity
YALI1_A03029g	Compare to YALI0A02497g, no similarity
YALI1_A03069g	Compare to YALI0A02541g, similar to Saccharomyces cerevisiae FOL1 (YNL256W); ancestral locus Anc_1.104, similar to uniprot|P53848 Saccharomyces cerevisiae YNL256w FOL1 Dihydroneopterin aldolase dihydro-6- hydroxymethylpterin pyrophosphokinase dihydropteroate synthetase
YALI1_A03081g	Compare to YALI0A02563g, similar to Saccharomyces cerevisiae COQ10 (YOL008W); ancestral locus Anc_6.36, weakly similar to uniprot|Q08058 Saccharomyces cerevisiae YOL008w hypothetical ORF
YALI1_A03091g	Compare to YALI0A02585g, weakly similar to uniprot|Q92328 Saccharomyces cerevisiae YOL009c MDM12 involved in mitochondrial inheritance, similar to Saccharomyces cerevisiae MDM12 (YOL009C); ancestral locus Anc_6.37
YALI1_A03116g	Compare to YALI0A02607g, similar to uniprot|Q8VUL6 Pseudomonas species N- carbamyl- L-cysteine amidohydrolase
YALI1_A03137g	Compare to YALI0A02629g, no similarity
YALI1_A03153g	Compare to YALI0A02651g, similar to uniprot|P19968 Neurospora crassa NADH- ubiquinone oxidoreductase 21.3 kDa subunit (EC 1.6.5.3) (EC 1.6.99.3)
YALI1_A03170g	Compare to YALI0A02673g, similar to CA1925|IPF18587 Candida albicans putative methyltransferase
YALI1_A03183g	Compare to YALI0A02695g, similar to uniprot|P40217 Saccharomyces cerevisiae YMR146c TIF34 translation initiation factor eIF3 p39 subunit, similar to Saccharomyces cerevisiae TIF34 (YMR146C); ancestral locus Anc_2.380
YALI1_A03210g	Compare to YALI0A02717g, similar to uniprot|P42938 Saccharomyces cerevisiae YGR205w, similar to Saccharomyces cerevisiae YGR205W; ancestral locus Anc_5.132
YALI1_A03258g	Compare to YALI0A02783g, highly similar to uniprot|Q6CB79 Yarrowia lipolytica YALI0C21252g
YALI1_A03278g	Compare to YALI0A02849g, similar to Saccharomyces cerevisiae MRPL27 (YBR282W); ancestral locus Anc_1.304, similar to uniprot|P36526 Saccharomyces cerevisiae YBR282W 60S ribosomal protein L27 mitochondrial precursor (YmL27)
YALI1_A03289g	Compare to YALI0A02871g, similar to Saccharomyces cerevisiae HUB1 (YNR032C-A); ancestral locus Anc_6.343, highly similar to uniprot|Q6Q546 Saccharomyces cerevisiae YNR032C-A HUB1 weak similarity to ubiquitin- like proteins
YALI1_A03300g	Compare to YALI0A02893g, similar to Saccharomyces cerevisiae YEL023C; ancestral locus Anc_1.460, similar to uniprot|P39992 Saccharomyces cerevisiae YEL023C Hypothetical 78.3 kDa protein in RIP1-GEA2 intergenic region
YALI1_A03322g	Compare to YALI0A02915g, similar to uniprot|P08067 Saccharomyces cerevisiae YEL024w RIP1 ubiquinol--cytochrome-c reductase iron-sulfur protein precursor singleton, similar to Saccharomyces cerevisiae RIP1 (YEL024W); ancestral locus Anc_1.461
YALI1_A03351g	Compare to YALI0A02937g, similar to Saccharomyces cerevisiae DPB3 (YBR278W) and DLS1 (YJL065C); ancestral locus Anc_1.311, weakly similar to uniprot|Q02516 Saccharomyces cerevisiae YOR358w HAP CCAAT-binding factor subunit
YALI1_A03356g	Truncated form of YALI0A02959g, similar to uniprot|O60159 Schizosaccharomyces pombe Chloride channel
YALI1_A03396g	Truncated form of YALI0A02981g, weakly similar to uniprot|Q9C232 Neurospora crassa Conserved hypothetical protein
YALI1_A03402g	Compare to YALI0A03003g, similar to Saccharomyces cerevisiae YNR036C; ancestral locus Anc_6.352, highly similar to uniprot|P53732 Saccharomyces cerevisiae Putative mitochondrial 40S ribosomal protein YNR036C
YALI1_A03422g	Compare to YALI0A03025g, similar to Saccharomyces cerevisiae ARC35 (YNR035C); ancestral locus Anc_6.351, similar to uniprot|O14241 Schizosaccharomyces pombe Probable ARP2/3 complex 34 kDa subunit (P34-ARC)
YALI1_A03442g	Compare to YALI0A03069g, no similarity possibly noncoding
YALI1_A03450g	Compare to YALI0A03091g, weakly similar to uniprot|P15365 Saccharomyces cerevisiae YJR152w DAL5 allantoate permease
YALI1_A03487g	Compare to YALI0A03113g, similar to Saccharomyces cerevisiae SNC1 (YAL030W) and SNC2 (YOR327C); ancestral locus Anc_7.67, highly similar to uniprot|P31109 Saccharomyces cerevisiae YAL030W Synaptobrevin homolog 1
YALI1_A03512g	Compare to YALI0A03135g, similar to uniprot|P32837 Saccharomyces cerevisiae YDL210W GABA-specific permease (GABA-specific transport protein)
YALI1_A03549g	Compare to YALI0A03179g, no similarity
YALI1_A03567g	Compare to YALI0A03201g, weakly similar to uniprot|Q6CH72 Yarrowia lipolytica YALI0A11759g
YALI1_A03579g	Converted to coding from non-coding YALI0A03223g, some similarities with Q8NIP3 yarrowia lipolytica Reverse transcriptase Ylli
YALI1_A03624g	Compare to YALI0A03245g, similar to uniprot|P23287 Saccharomyces cerevisiae YLR433c CNA1 calcineurin B catalytic subunit (Serine/threonine protein phosphatase)
YALI1_A03669g	Compare to YALI0A03399g, no similarity
YALI1_A03688g	Compare to YALI0A03421g, highly similar to uniprot|Q6CFK4 Yarrowia lipolytica YALI0B06160g
YALI1_A03721g	Compare to YALI0A03443g, similar to Saccharomyces cerevisiae MVP1 (YMR004W); ancestral locus Anc_6.38, weakly similar to uniprot|P40959 Saccharomyces cerevisiae YMR004w MVP1 required for vacuolar protein sorting
YALI1_A03757g	Compare to YALI0A03509g, similar to Saccharomyces cerevisiae NOP4 (YPL043W); ancestral locus Anc_8.491, similar to uniprot|P37838 Saccharomyces cerevisiae YPL043w NOP4 nucleolar protein P15
YALI1_A03763g	Compare to YALI0A03531g, weakly similar to uniprot|P38907 Saccharomyces cerevisiae YDR254w CHL4 chromosome segregation protein, similar to Saccharomyces cerevisiae CHL4 (YDR254W); ancestral locus Anc_8.492
YALI1_A03803g	Compare to YALI0A03553g, similar to Saccharomyces cerevisiae VPS16 (YPL045W); ancestral locus Anc_8.493, similar to uniprot|Q9UT38 Schizosaccharomyces pombe Vacuolar protein sorting-associated protein
YALI1_A03809g	Compare to YALI0A03575g, similar to Saccharomyces cerevisiae ELC1 (YPL046C); ancestral locus Anc_8.494, similar to uniprot|Q03071 Saccharomyces cerevisiae YPL046c ELC1 Elongin C transcription elongation factor
YALI1_A03837g	Compare to YALI0A03597g, similar to uniprot|Q03655 Saccharomyces cerevisiae YMR215W GAS3 protein precursor
YALI1_A03857g	Compare to YALI0A03641g, no similarity
YALI1_A03883g	Compare to YALI0A03663g, no similarity
YALI1_A03907g	Truncated form of YALI0A03685g, no similarity
YALI1_A03937g	Compare to YALI0A03751g, similar to Saccharomyces cerevisiae GIS2 (YNL255C); ancestral locus Anc_1.105, no similarity
YALI1_A03964g	Compare to YALI0A03773g, similar to uniprot|P53883 Saccharomyces cerevisiae YNL175c NOP13
YALI1_A04006g	Compare to YALI0A03817g, weakly similar to CA5921|IPF8930 Candida albicans unknown function
YALI1_A04022g	Compare to YALI0A03839g, highly similar to uniprot|P32481 Saccharomyces cerevisiae YER025w GCD11 translation initiation factor eIF2 gamma chain, similar to Saccharomyces cerevisiae GCD11 (YER025W); ancestral locus Anc_7.513
YALI1_A04071g	Compare to YALI0A03861g, weakly similar to uniprot|P34218 Saccharomyces cerevisiae YBL052c SAS3 silencing protein
YALI1_A04109g	Compare to YALI0A03883g, similar to Saccharomyces cerevisiae NUP133 (YKR082W); ancestral locus Anc_5.675, weakly similar to CA2663|CaNUP133 Candida albicans nuclear pore protein (by homology)
YALI1_A04119g	Compare to YALI0A03905g, highly similar to uniprot|P36160 Saccharomyces cerevisiae YKR081c, similar to Saccharomyces cerevisiae RPF2 (YKR081C); ancestral locus Anc_5.674
YALI1_A04178g	Compare to YALI0A03927g, weakly similar to uniprot|P38766 Saccharomyces cerevisiae YHR031C hypothetical helicase in SLT2-PUT2 intergenic region
YALI1_A04261g	Compare to YALI0A03949g, similar to uniprot|Q06593 Saccharomyces cerevisiae YPR194c oligopeptide transporter
YALI1_A04309g	Compare to YALI0A03971g, similar to uniprot|Q6CHW5 Yarrowia lipolytica YALI0A04059g
YALI1_A04332g	Compare to YALI0A03993g, no similarity
YALI1_A04341g	Compare to YALI0A04059g, similar to uniprot|Q6CHW7 Yarrowia lipolytica YALI0A03971g
YALI1_A04385g	Converted to coding from non-coding YALI0A04125g, weakly similar to uniprot|Q92389 Yarrowia lipolytica Acid extracellular protease precursor
YALI1_A04415g	Compare to YALI0A04191g, weakly similar to uniprot|Q6C7S2 Yarrowia lipolytica YALI0D25806g
YALI1_A04462g	Compare to YALI0A04279g, similar to uniprot|Q00416 Saccharomyces cerevisiae YLR430w SEN1 positive effector of tRNA-splicing endonuclease
YALI1_A04495g	Compare to YALI0A04301g, no similarity
YALI1_A04533g	Compare to YALI0A04323g, weakly similar to uniprot|Q7S0H1 Neurospora crassa NCU06945.1 related to 2'-hydroxyisoflavone reductase
YALI1_A04561g	Compare to YALI0A04345g, similar to Saccharomyces cerevisiae CDC73 (YLR418C); ancestral locus Anc_4.290, similar to uniprot|Q06697 Saccharomyces cerevisiae YLR418c CDC73 DNA-directed RNA polymerase II accessory protein
YALI1_A04576g	Compare to YALI0A04367g, uniprot|P41925 Yarrowia lipolytica Ras-like GTP- binding protein RYL2
YALI1_A04620g	Compare to YALI0A04455g, no similarity
YALI1_A04661g	Compare to YALI0A04499g, no similarity possibly noncoding
YALI1_A04676g	Compare to YALI0A04521g, no similarity
YALI1_A04715g	Compare to YALI0A04587g, no similarity
YALI1_A04742g	Compare to YALI0A04609g, similar to Saccharomyces cerevisiae RAX2 (YLR084C); ancestral locus Anc_8.256, weakly similar to uniprot|Q12465 Saccharomyces cerevisiae YLR084c RAX2
YALI1_A04781g	Truncated form of YALI0A04631g, weakly similar to uniprot|Q6C9E1 Yarrowia lipolytica YALI0D11924g
YALI1_A04795g	Truncated form of YALI0A04631g, weakly similar to uniprot|Q6C9E1 Yarrowia lipolytica YALI0D11924g
YALI1_A04815g	Compare to YALI0A04653g, weakly similar to uniprot|Q8H919 Oryza sativa Putative WD domain containing protein
YALI1_A04817g	Compare to YALI0A04675g, similar to Saccharomyces cerevisiae DDP1 (YOR163W); ancestral locus Anc_6.58, similar to uniprot|Q99321 Saccharomyces cerevisiae YOR163W Diadenosine and diphosphoinositol polyphosphate phosphohydrolase 1 (EC 3.6.1.-) (Diadenosine 5 5 -P1 P6- hexaphosphate hydrolase) (AP6A hydrolase)
YALI1_A04848g	Compare to YALI0A04697g, similar to uniprot|O42626 Neurospora crassa Serine/threonine-protein kinase nrc-2 (Nonrepressible conidiation protein 2)
YALI1_A04884g	Compare to YALI0A04719g, no similarity
YALI1_A04893g	Compare to YALI0A04741g, no similarity
YALI1_A04927g	Compare to YALI0A04785g, no similarity
YALI1_A04976g	Compare to YALI0A04873g, no similarity
YALI1_A05003g	Compare to YALI0A04895g, similar to Saccharomyces cerevisiae NPC2 (YDL046W); ancestral locus Anc_3.143, similar to uniprot|Q12408 Saccharomyces cerevisiae YDL046w NPC2 probable phosphatidylglycerol/phosphatidylinositol transfer protein
YALI1_A05031g	Compare to YALI0A04917g, similar to uniprot|P40088 Saccharomyces cerevisiae YER145c FTR1 iron permease that mediates high-affinity iron uptake
YALI1_A05052g	Compare to YALI0A04939g, some similarities with uniprot|P38112 Saccharomyces cerevisiae YBR142W ATP-dependent RNA helicase MAK5
YALI1_A05091g	Truncated form of YALI0A04961g, similar to Saccharomyces cerevisiae SMD1 (YGR074W); ancestral locus Anc_3.139, weakly similar to uniprot|Q02260 Saccharomyces cerevisiae YGR074w SMD1 snRNA-associated protein
YALI1_A05116g	Compare to YALI0A04983g, similar to Saccharomyces cerevisiae TSC13 (YDL015C); ancestral locus Anc_3.184, similar to uniprot|O94511 Schizosaccharomyces pombe 3- oxo-5-alpha-steroid 4-dehydrogenase
YALI1_A05143g	Compare to YALI0A05005g, some similarities with uniprot|Q6C8A2 Yarrowia lipolytica YALI0D21406g
YALI1_A05168g	Compare to YALI0A05027g, weakly similar to uniprot|Q12140 Saccharomyces cerevisiae YDL037c BSC1
YALI1_A05210g	Compare to YALI0A05115g, similar to Saccharomyces cerevisiae YOR238W; ancestral locus Anc_8.660, similar to uniprot|P87055 Schizosaccharomyces pombe Hypothetical protein C57A10.07 in chromosome I
YALI1_A05220g	Compare to YALI0A05137g, similar to Saccharomyces cerevisiae YJL062W-A; ancestral locus Anc_1.314, similar to uniprot|Q3E7B2 Saccharomyces cerevisiae YJL062W-A
YALI1_A05229g	Compare to YALI0A05159g, weakly similar to uniprot|Q9USK4 Schizosaccharomyces pombe Cell cycle control protein cwf20
YALI1_A05254g	Compare to YALI0A05181g, similar to uniprot|Q12080 Saccharomyces cerevisiae Hypothetical protein YPL146C, similar to Saccharomyces cerevisiae NOP53 (YPL146C); ancestral locus Anc_8.659
YALI1_A05259g	Compare to YALI0A05203g, no similarity
YALI1_A05284g	Compare to YALI0A05225g, no similarity
YALI1_A05335g	Compare to YALI0A05247g, weakly similar to uniprot|P53599 Saccharomyces cerevisiae YNR031c SSK2 MAP kinase kinase kinase of the high osmolarity signal transduction pathway, similar to Saccharomyces cerevisiae SSK22 (YCR073C) and SSK2 (YNR031C); ancestral locus Anc_6.341
YALI1_A05355g	Compare to YALI0A05291g, no similarity
YALI1_A05366g	Converted to coding from non-coding YALI0A05313g, weakly similar to uniprot|Q6H967 Yarrowia lipolytica Putative MutA transposase
YALI1_A05407g	Compare to YALI0A05357g, similar to Saccharomyces cerevisiae PPG1 (YNR032W); ancestral locus Anc_6.342, similar to uniprot|P32838 Saccharomyces cerevisiae YNR032w PPG1 phosphoprotein phosphatase PPG catalytic chain
YALI1_A05459g	Compare to YALI0A05379g, similar to uniprot|P37254 Saccharomyces cerevisiae YNR033w ABZ1 para-aminobenzoate synthase, similar to Saccharomyces cerevisiae ABZ1 (YNR033W); ancestral locus Anc_6.344
YALI1_A05473g	Compare to YALI0A05401g, similar to Saccharomyces cerevisiae DPB4 (YDR121W); ancestral locus Anc_8.275, weakly similar to uniprot|Q04603 Saccharomyces cerevisiae YDR121w DPB4 DNA polymerase II (epsilon) 4th subunit
YALI1_A05491g	Compare to YALI0A05423g, similar to Saccharomyces cerevisiae SMX3 (YPR182W); ancestral locus Anc_7.539, similar to wi|NCU01614.1 Neurospora crassa NCU01614. 1 hypothetical protein (related to snRNP protein SMX3)
YALI1_A05527g	Compare to YALI0A05533g, similar to uniprot|P53920 Saccharomyces cerevisiae YNL123W Hypothetical 110.9 kDa protein in SPC98-TOM70 intergenic region
YALI1_A05571g	Compare to YALI0A05555g, similar to Saccharomyces cerevisiae RCL1 (YOL010W); ancestral locus Anc_6.39, similar to uniprot|Q08096 Saccharomyces cerevisiae YOL010w RCL1 similarity to human RNA 3 -terminal phosphate cyclase
YALI1_A05605g	Compare to YALI0A05577g, weakly similar to uniprot|P35210 Saccharomyces cerevisiae YKL020c SPT23 dosage-dependent suppressor of Ty- induced promotor mutations
YALI1_A05662g	Compare to YALI0A05665g, highly similar to uniprot|Q6CI65 Yarrowia lipolytica YALI0A01265g
YALI1_A05701g	Compare to YALI0A05775g, no similarity
YALI1_A05737g	Compare to YALI0A05885g, weakly similar to uniprot|Q6CHL4 Yarrowia lipolytica YALI0A07667g
YALI1_A05774g	Compare to YALI0A05929g, weakly similar to uniprot|Q6CCA5 Yarrowia lipolytica YALI0C11077g
YALI1_A05795g	Compare to YALI0A05951g, weakly similar to uniprot|P46950 Saccharomyces cerevisiae YGR197c SNG1 involved in nitroguanidine resistance
YALI1_A05813g	Compare to YALI0A05973g, no similarity
YALI1_A05821g	Compare to YALI0A05995g, similar to uniprot|P53859 Saccharomyces cerevisiae YNL232w CSL4 core component of the 3 -5 exosome, similar to Saccharomyces cerevisiae CSL4 (YNL232W); ancestral locus Anc_2.11
YALI1_A05844g	Compare to YALI0A06017g, no similarity, no similarity
YALI1_A05884g	Compare to YALI0A06061g, weakly similar to uniprot|Q6CI46 Yarrowia lipolytica YALI0A01826g
YALI1_A05927g	Compare to YALI0A06105g, weakly similar to uniprot|Q6H8S0 Yarrowia lipolytica Polyprotein
YALI1_A05947g	Compare to YALI0A06171g, no similarity
YALI1_A05987g	Compare to YALI0A06215g, some similarities with uniprot|P02309 Saccharomyces cerevisiae YNL030w HHF2 histone H4
YALI1_A06052g	Compare to YALI0A06347g, no similarity
YALI1_A06073g	Compare to YALI0A06369g, weakly similar to uniprot|P12611 Saccharomyces cerevisiae YOR043w WHI2 growth regulation protein, similar to Saccharomyces cerevisiae WHI2 (YOR043W); ancestral locus Anc_5.639
YALI1_A06099g	Compare to YALI0A06435g, similar to uniprot|P09232 Saccharomyces cerevisiae YEL060c PRB1 protease B vacuolar
YALI1_A06116g	Compare to YALI0A06457g, no similarity
YALI1_A06128g	Compare to YALI0A06479g, similar to Saccharomyces cerevisiae RSA4 (YCR072C); ancestral locus Anc_6.340, highly similar to uniprot|Q8NKJ4 Saccharomyces cerevisiae YCR072C YCR72C Beta-transducin family (WD-40 repeat) protein
YALI1_A06149g	Compare to YALI0A06501g, similar to Saccharomyces cerevisiae IMG2 (YCR071C); ancestral locus Anc_6.339, no similarity
YALI1_A06169g	Compare to YALI0A06523g, weakly similar to uniprot|Q04740 Saccharomyces cerevisiae YMR234w RNH1 ribonuclease H
YALI1_A06229g	Compare to YALI0A06589g, similar to uniprot|P27810 Saccharomyces cerevisiae YOR099w KTR1 mannosyltransferase involved in n-linked and o-linked glycosylation
YALI1_A06287g	Compare to YALI0A06611g, weakly similar to DEHA0A05082g Debaryomyces hansenii IPF 6622.1, similar to Saccharomyces cerevisiae YGR150C; ancestral locus Anc_4.87
YALI1_A06311g	Compare to YALI0A06633g, no similarity
YALI1_A06361g	Compare to YALI0A06655g, similar to Saccharomyces cerevisiae PXA2 (YKL188C); ancestral locus Anc_4.287, similar to uniprot|P41909 Saccharomyces cerevisiae YPL147w PXA1 long-chain fatty acid transporter
YALI1_A06381g	Compare to YALI0A06677g, no similarity
YALI1_A06396g	Compare to YALI0A06699g, similar to Saccharomyces cerevisiae STE18 (YJR086W); ancestral locus Anc_7.455, weakly similar to uniprot|P18852 Saccharomyces cerevisiae YJR086w STE18 GTP-binding protein gamma subunit of the pheromone pathway
YALI1_A06402g	Compare to YALI0A06721g, no similarity
YALI1_A06416g	Compare to YALI0A06743g, similar to uniprot|Q8NJZ8 Emericella nidulans Theta class glutathione S-transferase (EC 2.5.1.18)
YALI1_A06434g	Compare to YALI0A06765g, similar to uniprot|P40513 Saccharomyces cerevisiae YIL070c MAM33 mitochondrial acidic matrix protein, similar to Saccharomyces cerevisiae MAM33 (YIL070C); ancestral locus Anc_7.265
YALI1_A06453g	Compare to YALI0A06787g, similar to uniprot|P38286 Saccharomyces cerevisiae YBR159W Hypothetical oxidoreductase in RPB5-CDC28 intergenic region (EC 1.-.-.-)
YALI1_A06473g	Compare to YALI0A06809g, weakly similar to DEHA0A06743g Debaryomyces hansenii
YALI1_A06488g	Truncated form of YALI0A06831g, no similarity
YALI1_A06591g	Compare to YALI0A06886g, no similarity
YALI1_A06594g	Compare to YALI0A06908g, similar to Saccharomyces cerevisiae POA1 (YBR022W); ancestral locus Anc_3.222, similar to uniprot|P38218 Saccharomyces cerevisiae YBR022w unknown function
YALI1_A06612g	Compare to YALI0A06930g, weakly similar to uniprot|Q96QF7 Homo sapiens NAAR1 Putative nuclear protein
YALI1_A06625g	Compare to YALI0A06952g, no similarity
YALI1_A06640g	Compare to YALI0A06974g, similar to uniprot|O74885 Schizosaccharomyces pombe SPCC576.01c xanthine oxidase
YALI1_A06666g	Compare to YALI0A06996g, similar to Saccharomyces cerevisiae CCL1 (YPR025C); ancestral locus Anc_7.431, similar to uniprot|P37366 Saccharomyces cerevisiae YPR025c CCL1 TFIIH subunit (transcription initiation factor) cyclin C component
YALI1_A06672g	Compare to YALI0A07018g, similar to uniprot|P32790 Saccharomyces cerevisiae YBL007c SLA1 cytoskeleton assembly control protein, similar to Saccharomyces cerevisiae SLA1 (YBL007C); ancestral locus Anc_4.108
YALI1_A06721g	Compare to YALI0A07062g, weakly similar to uniprot|O94384 Schizosaccharomyces pombe Hypothetical protein
YALI1_A06743g	Compare to YALI0A07084g, similar to Saccharomyces cerevisiae TOM20 (YGR082W); ancestral locus Anc_3.410, similar to uniprot|P35180 Saccharomyces cerevisiae YGR082w TOM20 mitochondrial outer membrane import receptor subunit translocase of outer membrane 20 kD subunit
YALI1_A06778g	Compare to YALI0A07106g, weakly similar to DEHA0F09801g Debaryomyces hansenii IPF 8358.1
YALI1_A06823g	Compare to YALI0A07128g, some similarities with uniprot|Q6CFZ1 Yarrowia lipolytica YALI0B02310g
YALI1_A06873g	Compare to YALI0A07142g, similar to uniprot|Q9UR03 Candida albicans Endo-1 3- beta- glucanase
YALI1_A06958g	Compare to YALI0A07403g, similar to uniprot|Q12434 Saccharomyces cerevisiae YDL135c RDI1 rho GDP dissociation inhibitor with activity toward RHO1P, similar to Saccharomyces cerevisiae RDI1 (YDL135C); ancestral locus Anc_7.303
YALI1_A06989g	Compare to YALI0A07425g, weakly similar to uniprot|Q9I3H5 Pseudomonas aeruginosa Probable flavin-containing monooxygenase
YALI1_A07014g	Compare to YALI0A07447g, weakly similar to uniprot|P53389 Saccharomyces cerevisiae YNR055c HOL1 member of major facilitator superfamily multidrug-resistance protein subfamily
YALI1_A07051g	Compare to YALI0A07557g, similar to uniprot|Q6CB45 Yarrowia lipolytica YALI0C22022g
YALI1_A07103g	Compare to YALI0A07579g, similar to uniprot|P32837 Saccharomyces cerevisiae YDL210W GABA-specific permease (GABA-specific transport protein)
YALI1_A07137g	Compare to YALI0A07601g, weakly similar to uniprot|P08640 Saccharomyces cerevisiae YIR019c STA1 extracellular alpha-1 4-glucan glucosidase
YALI1_A07201g	Compare to YALI0A07623g, weakly similar to uniprot|Q8NIX1 Neurospora crassa Related to integral membrane protein PTH11
YALI1_A07241g	Compare to YALI0A07667g, weakly similar to uniprot|Q6CH08 Yarrowia lipolytica YALI0A14322g
YALI1_A07267g	Compare to YALI0A07689g, weakly similar to uniprot|P53847 Saccharomyces cerevisiae YNL258c hypothetical protein
YALI1_A07277g	Compare to YALI0A07711g, no similarity
YALI1_A07290g	Compare to YALI0A07733g, similar to Saccharomyces cerevisiae ECI1 (YLR284C) and DCI1 (YOR180C); ancestral locus Anc_6.78, similar to uniprot|Q8WZH4 Neurospora crassa Probable DELTA3 5-DELTA2 4-dienoyl-CoA isomerase precursor (ECH1)
YALI1_A07309g	Compare to YALI0A07755g, similar to uniprot|Q6C212 Yarrowia lipolytica YALI0F11737g
YALI1_A07318g	Compare to YALI0A07777g, no similarity
YALI1_A07326g	Compare to YALI0A07799g, similar to Saccharomyces cerevisiae YDR493W; ancestral locus Anc_3.89, similar to uniprot|Q9P3Q9 Neurospora crassa Conserved hypothetical protein
YALI1_A07349g	Compare to YALI0A07821g, similar to Saccharomyces cerevisiae DSF2 (YBR007C); ancestral locus Anc_3.196, weakly similar to uniprot|P38213 Saccharomyces cerevisiae YBR007c Hypothetical 82.4 kDa protein in UGA5- FLR1 intergenic region
YALI1_A07381g	Compare to YALI0A07843g, similar to Saccharomyces cerevisiae YER064C and VHR1 (YIL056W); ancestral locus Anc_7.246, weakly similar to DEHA0B02431g Debaryomyces hansenii IPF 9322.1
YALI1_A07405g	Compare to YALI0A07865g, no similarity
YALI1_A07418g	Compare to YALI0A07887g, weakly similar to uniprot|Q8NIP4 Yarrowia lipolytica Gag- like protein
YALI1_A07472g	Compare to YALI0A07997g, weakly similar to uniprot|Q12276 Saccharomyces cerevisiae YOR227w
YALI1_A07538g	Compare to YALI0A08019g, no similarity
YALI1_A07575g	Compare to YALI0A08041g, weakly similar to uniprot|P06776 Saccharomyces cerevisiae YOR360c PDE2 high affinity 3' 5'-cyclic- nucleotide phosphodiesterase, similar to Saccharomyces cerevisiae PDE2 (YOR360C); ancestral locus Anc_7.26
YALI1_A07624g	Compare to YALI0A08063g, weakly similar to uniprot|Q08831 Saccharomyces cerevisiae YOR359w VTS1 intracellular transporter, similar to Saccharomyces cerevisiae VTS1 (YOR359W); ancestral locus Anc_7.27
YALI1_A07649g	Compare to YALI0A08077g, similar to Saccharomyces cerevisiae PPZ2 (YDR436W) and PPZ1 (YML016C); ancestral locus Anc_5.548, similar to Saccharomyces cerevisiae GLC7 (YER133W); ancestral locus Anc_8.159, highly similar to uniprot|P20654 Emericella nidulans serine-threonine protein phosphatase PP1
YALI1_A07668g	Compare to YALI0A08107g, similar to uniprot|P40161 Saccharomyces cerevisiae YNL206c RTT106 similarity to structure-specific recognition proteins, similar to Saccharomyces cerevisiae RTT106 (YNL206C); ancestral locus Anc_2.45
YALI1_A07712g	Compare to YALI0A08129g, similar to uniprot|P47120 Saccharomyces cerevisiae YJR070C Hypothetical 36.2 kDa protein in HAM1-PEM2 intergenic region, similar to Saccharomyces cerevisiae LIA1 (YJR070C); ancestral locus Anc_1.521
YALI1_A07730g	Compare to YALI0A08151g, highly similar to uniprot|P32529 Saccharomyces cerevisiae YJR063W DNA-directed RNA polymerase I 13.7 kDa polypeptide (EC 2.7.7.6), similar to Saccharomyces cerevisiae RPA12 (YJR063W); ancestral locus Anc_1.512
YALI1_A07768g	Compare to YALI0A08165g, weakly similar to uniprot|P08640 Saccharomyces cerevisiae YIR019c STA1 extracellular alpha-1 4-glucan glucosidase
YALI1_A07829g	Compare to YALI0A08195g, similar to uniprot|Q6C4M5 Yarrowia lipolytica YALI0E25443g
YALI1_A07887g	Compare to YALI0A08217g, similar to uniprot|P30887 Yarrowia lipolytica Acid phosphatase precursor (EC 3.1.3.2)
YALI1_A07937g	Compare to YALI0A08239g, similar to Saccharomyces cerevisiae YNL234W; ancestral locus Anc_2.9, some similarities with uniprot|P53857 Saccharomyces cerevisiae YNL234w
YALI1_A07977g	Compare to YALI0A08261g, weakly similar to KLLA0E01001g Kluyveromyces lactis IPF 3777.1, similar to Saccharomyces cerevisiae BNI4 (YNL233W); ancestral locus Anc_2.10
YALI1_A08047g	Compare to YALI0A08327g, no similarity possibly noncoding
YALI1_A08049g	Compare to YALI0A08338g, no similarity possibly noncoding
YALI1_A08073g	Compare to YALI0A08360g, weakly similar to uniprot|P09230 Yarrowia lipolytica Alkaline extracellular protease precursor (EC 3. 4.21.-) (AEP)
YALI1_A08126g	Compare to YALI0A08404g, weakly similar to uniprot|Q6CHL4 Yarrowia lipolytica YALI0A07667g
YALI1_A08175g	Compare to YALI0A08426g, similar to Saccharomyces cerevisiae POL3 (YDL102W); ancestral locus Anc_2.351, similar to uniprot|P15436 Saccharomyces cerevisiae YDL102w CDC2 DNA-directed DNA polymerase delta catalytic 125 KD subunit
YALI1_A08206g	Compare to YALI0A08448g, similar to uniprot|P53860 Saccharomyces cerevisiae YNL231c PDR16 protein involved in lipid biosynthesis and multidrug resistance
YALI1_A08341t	Compare to YALI0A07249g, Full length Line element, uniprot|Q8NIP4 Yarrowia lipolytica gag-like protein
YALI1_A08362t	Full length Line element
YALI1_A08436g	Truncated form of YALI0A08536g, similar to uniprot|P39012 Saccharomyces cerevisiae YLR088w GAA1 required for attachment of GPI anchor onto proteins, similar to Saccharomyces cerevisiae GAA1 (YLR088W); ancestral locus Anc_8.261
YALI1_A08467g	Compare to YALI0A08558g, no similarity
YALI1_A08468g	Compare to YALI0A08580g, similar to Saccharomyces cerevisiae RAD18 (YCR066W); ancestral locus Anc_6.332, similar to uniprot|P10862 Saccharomyces cerevisiae YCR066w RAD18 DNA repair protein
YALI1_A08486g	Compare to YALI0A08624g, no similarity
YALI1_A08502g	Compare to YALI0A08646g, similar to Saccharomyces cerevisiae SED4 (YCR067C) and SEC12 (YNR026C); ancestral locus Anc_6.333, weakly similar to uniprot|P11655 Saccharomyces cerevisiae YNR026c SEC12 GDP/GTP exchange factor for SAR1P
YALI1_A08512g	Compare to YALI0A08668g, similar to Saccharomyces cerevisiae BUD17 (YNR027W); ancestral locus Anc_6.334, similar to uniprot|P39988 Saccharomyces cerevisiae YEL029c
YALI1_A08546g	Compare to YALI0A08734g, similar to uniprot|O94562 Schizosaccharomyces pombe Aminotransferase
YALI1_A08614g	Compare to YALI0A08800g, weakly similar to uniprot|Q12303 Saccharomyces cerevisiae YLR121c YPS3 GPI-anchored aspartyl protease 3 (yapsin 3)
YALI1_A08623g	Compare to YALI0A08866g, some similarities with uniprot|P38314 Saccharomyces cerevisiae YBR214w SDS24 and some similarities with uniprot|P53172 Saccharomyces cerevisiae YGL056c SDS23
YALI1_A08653g	Truncated form of YALI0A08888g, no similarity
YALI1_A08672g	Compare to YALI0A08998g, uniprot|Q6H9P4 Yarrowia lipolytica Putative sugar transporter and similar to uniprot|P39932 Saccharomyces cerevisiae YDR536w STL1 member of the sugar permease family
YALI1_A08729g	Truncated form of YALI0A09020g, similar to Saccharomyces cerevisiae YSP1 (YHR155W) and SIP3 (YNL257C); ancestral locus Anc_1.100, highly similar to uniprot|Q6H9P3 Yarrowia lipolytica Putative Sip3 protein and weakly similar to uniprot|P38717 Saccharomyces cerevisiae YNL257c SIP3 SNF1P protein kinase interacting protein
YALI1_A08781g	Compare to YALI0A09042g, similar to Saccharomyces cerevisiae COQ6 (YGR255C); ancestral locus Anc_1.103, uniprot|Q6H9P2 Yarrowia lipolytica Putative ubiquitin monooxygenase and similar to uniprot|P53318 Saccharomyces cerevisiae YGR255C Ubiquinone biosynthesis monooxgenase COQ6
YALI1_A08787g	Compare to YALI0A09064g, similar to Saccharomyces cerevisiae TMS1 (YDR105C); ancestral locus Anc_8.250, similar to uniprot|Q12116 Saccharomyces cerevisiae YDR105c
YALI1_A08828g	Compare to YALI0A09086g, no similarity
YALI1_A08856g	Compare to YALI0A09108g, weakly similar to uniprot|P23285 Saccharomyces cerevisiae YHR057c CYP2 peptidyl-prolyl cis-trans isomerase
YALI1_A08901g	Compare to YALI0A09196g, some similarities with uniprot|Q8TFK5 Yarrowia lipolytica Cell wall protein
YALI1_A08981g	Compare to YALI0A09262g, uniprot|Q6H9N6 Yarrowia lipolytica Alkaline extracellular protease precursor (AEP2)
YALI1_A09010g	Compare to YALI0A09284g, no similarity
YALI1_A09064g	Compare to YALI0A09383g, weakly similar to uniprot|P53322 Saccharomyces cerevisiae YGR260w TNA1 related to allantoate transport protein
YALI1_A09100g	Compare to YALI0A09405g, no similarity
YALI1_A09121g	Compare to YALI0A09427g, similar to Saccharomyces cerevisiae MST1 (YKL194C); ancestral locus Anc_4.299, uniprot|Q6H9P8 Yarrowia lipolytica Mitochondrial threonyl tRNA synthase
YALI1_A09139g	Compare to YALI0A09438g, gnl|GLV|YALI0A09438g [Yarrowia lipolytica] weakly similar to DEHA0C10868g related to uniprot|P07253 Saccharomyces cerevisiae YBR120c CBP6
YALI1_A09149g	Converted to coding from non-coding YALI0A09443g, weakly similar to uniprot|Q6C2A0 Yarrowia lipolytica YALI0F09537g
YALI1_A09166g	Compare to YALI0A09449g, uniprot|Q6H9Q0 Yarrowia lipolytica weakly similar to uniprot|P41734 Saccharomyces cerevisiae YOR126c EST2 isoamyl acetate hydrolytic enzyme, similar to Saccharomyces cerevisiae IAH1 (YOR126C); ancestral locus Anc_5.449
YALI1_A09190g	Compare to YALI0A09471g, no similarity
YALI1_A09218g	Compare to YALI0A09537g, some similarities with uniprot|O74881 Schizosaccharomyces pombe BTB domain and Ankaryin repeat containing protein,ancestral locus Anc_8.777
YALI1_A09325g	Compare to YALI0A09559g, no similarity
YALI1_A09372g	Compare to YALI0A09592g, similar to uniprot|P10823 Saccharomyces cerevisiae YER020w GPA2 guanine nucleotide-binding regulatory protein
YALI1_A09397g	Compare to YALI0A09614g, no similarity
YALI1_A09408g	Compare to YALI0A09636g, similar to Saccharomyces cerevisiae NNT1 (YLR285W); ancestral locus Anc_6.79, similar to uniprot|Q05874 Saccharomyces cerevisiae YLR285w NNT1 nicotinamide N-methyltransferase
YALI1_A09422g	Compare to YALI0A09658g, weakly similar to uniprot|P07834 Saccharomyces cerevisiae YFL009w CDC4 cell division control protein
YALI1_A09444g	Compare to YALI0A09680g, weakly similar to uniprot|Q8WTW9 Homo sapiens Hypothetical protein
YALI1_A09467g	Compare to YALI0A09702g, similar to Saccharomyces cerevisiae SGM1 (YJR134C); ancestral locus Anc_4.364, weakly similar to uniprot|P47166 Saccharomyces cerevisiae YJR134c SGM1 similarity to paramyosin myosin
YALI1_A09522g	Compare to YALI0A09724g, similar to uniprot|P25336 Saccharomyces cerevisiae YCR092c MSH3 DNA mismatch repair protein
YALI1_A09524g	Compare to YALI0A09746g, similar to Saccharomyces cerevisiae PSF1 (YDR013W); ancestral locus Anc_3.234, similar to uniprot|Q12488 Saccharomyces cerevisiae YDR013w similarity to human hypothetical KIAA0186 protein
YALI1_A09553g	Compare to YALI0A09768g, similar to Saccharomyces cerevisiae THI4 (YGR144W); ancestral locus Anc_5.141, highly similar to uniprot|P23618 Fusarium oxysporum Thiazole biosynthetic enzyme mitochondrial precursor (Stress- inducible protein sti35)
YALI1_A09576g	Compare to YALI0A09790g, similar to Saccharomyces cerevisiae TAP42 (YMR028W); ancestral locus Anc_2.581, similar to uniprot|Q04372 Saccharomyces cerevisiae YMR028w TAP42 component of the Tor signaling pathway
YALI1_A09593g	Compare to YALI0A09812g, similar to uniprot|Q04371 Saccharomyces cerevisiae YMR027w HRT2 high level expression reduced Ty3 transposition, similar to Saccharomyces cerevisiae YMR027W; ancestral locus Anc_2.578
YALI1_A09626g	Compare to YALI0A09834g, similar to uniprot|P35728 Saccharomyces cerevisiae YKL059c, similar to Saccharomyces cerevisiae MPE1 (YKL059C); ancestral locus Anc_2.579
YALI1_A09638g	Compare to YALI0A09845g, gnl|GLV|YALI0A09845g [Yarrowia lipolytica] similar to uniprot|P53633 Saccharomyces cerevisiae YNL044W YIP3 Prenylated Rab acceptor 1 interacts with YPT proteins, similar to Saccharomyces cerevisiae YIP3 (YNL044W); ancestral locus Anc_2.269
YALI1_A09694g	Compare to YALI0A09856g, similar to uniprot|P49095 Saccharomyces cerevisiae YMR189w GSD2 glycine decarboxylase P subunit, similar to Saccharomyces cerevisiae GCV2 (YMR189W); ancestral locus Anc_6.277
YALI1_A09741g	Compare to YALI0A09878g, weakly similar to uniprot|Q04740 Saccharomyces cerevisiae YMR234w RNH1 ribonuclease H
YALI1_A09766g	Truncated form of YALI0A09900g, highly similar to uniprot|Q9UVJ8 Ashbya gossypii Vacuolar ATP synthase catalytic subunit A (V-ATPase 69 kDa subunit), similar to Saccharomyces cerevisiae TFP1 (YDL185W); ancestral locus Anc_7.300
YALI1_A09798g	Compare to YALI0A09922g, similar to uniprot|P39741 Saccharomyces cerevisiae YDL136w SOS2 60S large subunit ribosomal protein, similar to Saccharomyces cerevisiae RPL35A (YDL191W) and RPL35B (YDL136W); ancestral locus Anc_7.306
YALI1_A09856g	Compare to YALI0A09988g, similar to Saccharomyces cerevisiae OCT1 (YKL134C); ancestral locus Anc_2.432, similar to uniprot|P35999 Saccharomyces cerevisiae YKL134c (MIP1) mitochondrial intermediate peptidase
YALI1_A09893g	Compare to YALI0A10010g, similar to uniprot|Q8NIR4 Neurospora crassa Conserved hypothetical protein
YALI1_A09911g	Compare to YALI0A10032g, similar to uniprot|Q12676 Saccharomyces cerevisiae YMR113w FOL3 dihydrofolate synthetase, similar to Saccharomyces cerevisiae RMA1 (YKL132C) and FOL3 (YMR113W); ancestral locus Anc_2.435
YALI1_A09919t	Converted to coding from non-coding YALI0A10054t, LTR yl1
YALI1_A09939g	Compare to YALI0A10076g, similar to Saccharomyces cerevisiae ERG9 (YHR190W); ancestral locus Anc_8.857, uniprot|Q9Y753 Yarrowia lipolytica Squalene synthase
YALI1_A09949g	Compare to YALI0A10098g, similar to Saccharomyces cerevisiae GTR1 (YML121W); ancestral locus Anc_8.855, similar to uniprot|Q00582 Saccharomyces cerevisiae YML121w GTR1 GTP-binding protein
YALI1_A09996g	Compare to YALI0A10120g, weakly similar to wi|NCU02617.1 Neurospora crassa NCU02617.1 hypothetical protein
YALI1_A10015g	Compare to YALI0A10142g, weakly similar to uniprot|P35732 Saccharomyces cerevisiae YKL054c VID31
YALI1_A10022g	Compare to YALI0A10164g, similar to Saccharomyces cerevisiae THP1 (YOL072W); ancestral locus Anc_3.141, weakly similar to uniprot|Q08231 Saccharomyces cerevisiae YOL072w THP1
YALI1_A10039g	Compare to YALI0A10186g, no similarity
YALI1_A10072g	Compare to YALI0A10208g, similar to uniprot|P09230 Yarrowia lipolytica Alkaline extracellular protease precursor (EC 3.4.21.-) (AEP)
YALI1_A10105g	Compare to YALI0A10230g, similar to uniprot|P22211 Saccharomyces cerevisiae YNL183c NPR1 ser/thr protein kinase
YALI1_A10143g	Compare to YALI0A10252g, similar to Saccharomyces cerevisiae IPI1 (YHR085W); ancestral locus Anc_5.381, weakly similar to uniprot|P38803 Saccharomyces cerevisiae YHR085w of the Brahma transcriptional activator
YALI1_A10146g	Truncated form of YALI0A10274g, similar to Saccharomyces cerevisiae YGL231C; ancestral locus Anc_3.552, weakly similar to uniprot|P53073 Saccharomyces cerevisiae YGL231c similarity to hypothetical protein SPCC1281.03c - S. pombe
YALI1_A10199g	Compare to YALI0A10296g, weakly similar to uniprot|O18158 Caenorhabditis elegans UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase (EC 2.4.1.-) (O-GlcNAc) (OGT)
YALI1_A10254g	Compare to YALI0A10310g, similar to uniprot|P51601 Saccharomyces cerevisiae YGR267c FOL2 GTP cyclohydrolase I, similar to Saccharomyces cerevisiae FOL2 (YGR267C); ancestral locus Anc_5.37
YALI1_A10267g	Compare to YALI0A10318g, no similarity
YALI1_A10318g	Compare to YALI0A10362g, weakly similar to uniprot|BAB27251 Mus musculus 13 days embryo liver cDNA
YALI1_A10365g	Compare to YALI0A10439g, similar to uniprot|Q9P8F7 Yarrowia lipolytica Triacylglycerol lipase precursor
YALI1_A10468g	Compare to YALI0A10483g, no similarity
YALI1_A10510g	Compare to YALI0A10549g, no similarity, similar to Saccharomyces cerevisiae YHR192W; ancestral locus Anc_4.357
YALI1_A10529g	Compare to YALI0A10571g, similar to DEHA0F16192g Debaryomyces hansenii, similar to Saccharomyces cerevisiae NAT5 (YOR253W); ancestral locus Anc_8.697
YALI1_A10565g	Compare to YALI0A10593g, weakly similar to uniprot|P39980 Saccharomyces cerevisiae YEL065w SIT1 probable multidrug resistance protein
YALI1_A10619g	Compare to YALI0A10615g, similar to uniprot|P39925 Saccharomyces cerevisiae YER017c AFG3 protease of the SEC18/CDC48/PAS1 family of ATPases (AAA)
YALI1_A10672g	Compare to YALI0A10637g, weakly similar to uniprot|O59741 Schizosaccharomyces pombe Putative transcriptional activator with fungal binuclear cluster domain
YALI1_A10708g	Compare to YALI0A10659g, uniprot|Q8J0M2 Yarrowia lipolytica ADP/ATP carrier protein
YALI1_A10784g	Compare to YALI0A10681g, weakly similar to DEHA0E13486g Debaryomyces hansenii IPF 11853.1
YALI1_A10798g	Compare to YALI0A10703g, weakly similar to uniprot|Q12433 Saccharomyces cerevisiae YOR023c AHC1 component of the ADA histone acetyltransferase complex
YALI1_A10827g	Compare to YALI0A10725g, similar to uniprot|P26786 Saccharomyces cerevisiae YOR096W 40S ribosomal protein S7-A (RP30), similar to Saccharomyces cerevisiae RPS7B (YNL096C) and RPS7A (YOR096W); ancestral locus Anc_2.188
YALI1_A10857g	Compare to YALI0A10747g, weakly similar to CAGL0H02101g Candida glabrata, similar to Saccharomyces cerevisiae YHR087W; ancestral locus Anc_5.384
YALI1_A10883g	Compare to YALI0A10769g, weakly similar to DEHA0F24530g Debaryomyces hansenii
YALI1_A10907g	Compare to YALI0A10813g, similar to Saccharomyces cerevisiae RRF1 (YHR038W); ancestral locus Anc_5.306, similar to uniprot|P38771 Saccharomyces cerevisiae YHR038w FIL1 Killed in Mutagen sensitive to Diepoxybutane and/or Mitomycin C singleton
YALI1_A10934g	Compare to YALI0A10879g, similar to Saccharomyces cerevisiae SKP1 (YDR328C); ancestral locus Anc_5.371, similar to uniprot|P52286 Saccharomyces cerevisiae YDR328c SKP1 kinetochore protein complex CBF3 subunit D singleton
YALI1_A10966g	Compare to YALI0A10901g, no similarity
YALI1_A11043g	Compare to YALI0A10945g, similar to Saccharomyces cerevisiae NUF2 (YOL069W); ancestral locus Anc_3.149, weakly similar to uniprot|P33895 Saccharomyces cerevisiae YOL069w NUF2 spindle pole body protein singleton
YALI1_A11079g	Compare to YALI0A10967g, some similarities with uniprot|Q7RYZ0 Neurospora crassa NCU06425.1 predicted protein
YALI1_A11114g	Compare to YALI0A10989g, similar to uniprot|Q6C159 Yarrowia lipolytica YALI0F19030g
YALI1_A11141g	Truncated form of YALI0A11011g, no similarity
YALI1_A11182g	Compare to YALI0A11077g, similar to Saccharomyces cerevisiae SCW11 (YGL028C); ancestral locus Anc_4.89, weakly similar to uniprot|P53189 Saccharomyces cerevisiae YGL028c SCW11
YALI1_A11218g	Compare to YALI0A11099g, similar to Saccharomyces cerevisiae SMY1 (YKL079W); ancestral locus Anc_2.633, similar to uniprot|Q9HES9 Emericella nidulans Kinesin (KINA protein)
YALI1_A11231g	Compare to YALI0A11121g, similar to uniprot|P53209 Saccharomyces cerevisiae YGR016w weak similarity to M.jannaschii hypothetical protein MJ1317 singleton
YALI1_A11258g	Compare to YALI0A11143g, similar to Saccharomyces cerevisiae VMA5 (YKL080W); ancestral locus Anc_2.634, similar to uniprot|P31412 Saccharomyces cerevisiae YKL080w VMA5 H+-ATPase V1 domain 42 KD subunit vacuolar
YALI1_A11270g	Compare to YALI0A11157g, highly similar to uniprot|Q07478 Saccharomyces cerevisiae YDL084w SUB2 Probable ATP-dependent RNA helicase involved in pre-mRNA splicing
YALI1_A11341g	Truncated form of YALI0A11198g, no similarity
YALI1_A11355g	Compare to YALI0A11220g, no similarity
YALI1_A11415g	Compare to YALI0A11407g, similar to uniprot|Q08979 Saccharomyces cerevisiae YPL263c KEL3, similar to Saccharomyces cerevisiae KEL3 (YPL263C); ancestral locus Anc_6.10
YALI1_A11439g	Compare to YALI0A11473g, weakly similar to uniprot|P12866 Saccharomyces cerevisiae YKL209c STE6 ATP-binding cassette transporter protein
YALI1_A11500g	Compare to YALI0A11517g, no similarity
YALI1_A11506g	Compare to YALI0A11539g, weakly similar to uniprot|P38766 Saccharomyces cerevisiae YHR031C Hypothetical helicase in SLT2-PUT2 intergenic region, similar to Saccharomyces cerevisiae RRM3 (YHR031C); ancestral locus Anc_5.275
YALI1_A11557g	Converted to coding from non-coding YALI0A11550g, weakly similar to uniprot|Q7S871 Hypothetical protein - Neurospora crassa
YALI1_A11612g	Compare to YALI0A11561g, no similarity
YALI1_A11654g	Compare to YALI0A11605g, weakly similar to uniprot|O94343 Schizosaccharomyces pombe Putative MSF transporter
YALI1_A11676g	Compare to YALI0A11627g, no similarity
YALI1_A11797g	Compare to YALI0A11649g, similar to uniprot|Q6CH30 Yarrowia lipolytica YALI0A13233g threonine-rich protein
YALI1_A11854g	Compare to YALI0A11671g, no similarity
YALI1_A11905g	Compare to YALI0A11737g, no similarity
YALI1_A11954g	Compare to YALI0A11759g, weakly similar to uniprot|Q6CHZ1 Yarrowia lipolytica YALI0A03201g
YALI1_A11966t	Compare to YALI0A07249g:2, Full length Line element, uniprot|Q8NIP4 Yarrowia lipolytica gag-like protein
YALI1_A11988t	Full length Line element
YALI1_A12037g	Compare to YALI0A11781g, highly similar to uniprot|Q9HDF5 Mortierella alpina Histone H4 at C-terminal domain
YALI1_A12067g	Compare to YALI0A11803g, weakly similar to CA3388|IPF6755 Candida albicans unknown function
YALI1_A12085g	Compare to YALI0A11847g, no similarity
YALI1_A12099g	Compare to YALI0A11869g, similar to Saccharomyces cerevisiae SKI2 (YLR398C); ancestral locus Anc_4.261, some similarities with uniprot|P35207 Saccharomyces cerevisiae YLR398C Antiviral protein SKI2
YALI1_A12152g	Compare to YALI0A11891g, no similarity
YALI1_A12167g	Compare to YALI0A11935g, no similarity
YALI1_A12225g	Compare to YALI0A12001g, weakly similar to uniprot|P13433 Saccharomyces cerevisiae YFL036W DNA-directed RNA polymerase mitochondrial precursor, similar to Saccharomyces cerevisiae RPO41 (YFL036W); ancestral locus Anc_8.28
YALI1_A12245g	Compare to YALI0A12023g, similar to Saccharomyces cerevisiae STS1 (YIR011C); ancestral locus Anc_7.179, some similarities with uniprot|P38637 Saccharomyces cerevisiae YIR011c STS1 required for transport of RNA15P from the cytoplasm to the nucleus
YALI1_A12284g	Compare to YALI0A12045g, similar to uniprot|P50861 Saccharomyces cerevisiae YOL143c RIB4 6 7-dimethyl -8-ribityllumazine synthase, similar to Saccharomyces cerevisiae RIB4 (YOL143C); ancestral locus Anc_3.7
YALI1_A12302g	Compare to YALI0A12067g, similar to Saccharomyces cerevisiae RRS1 (YOR294W); ancestral locus Anc_8.763, similar to uniprot|Q08746 Saccharomyces cerevisiae YOR294w RRS1 regulator of ribosome synthesis
YALI1_A12356g	Compare to YALI0A12111g, similar to Saccharomyces cerevisiae RGA2 (YDR379W) and RGA1 (YOR127W); ancestral locus Anc_5.453, some similarities with uniprot|P39083 Saccharomyces cerevisiae YOR127w RGA1 RHO-type GTPase-activating protein for CDC42P
YALI1_A12403g	Compare to YALI0A12133g, similar to Saccharomyces cerevisiae RRP3 (YHR065C); ancestral locus Anc_5.337, similar to uniprot|P38712 Saccharomyces cerevisiae YHR065c RRP3 required for maturation of the 35S primary transcript
YALI1_A12411g	Compare to YALI0A12155g, similar to Saccharomyces cerevisiae SSF2 (YDR312W) and SSF1 (YHR066W); ancestral locus Anc_5.338, similar to uniprot|P38789 Saccharomyces cerevisiae YHR066w SSF1 mating protein P2
YALI1_A12437g	Compare to YALI0A12177g, weakly similar to uniprot|Q12358 Saccharomyces cerevisiae Putative dioxygenase YLL057C
YALI1_A12445g	Compare to YALI0A12199g, no similarity
YALI1_A12465g	Compare to YALI0A12221g, no similarity
YALI1_A12475g	Compare to YALI0A12243g, no similarity
YALI1_A12492g	Compare to YALI0A12265g, no similarity
YALI1_A12502g	Compare to YALI0A12287g, similar to Saccharomyces cerevisiae YEL043W; ancestral locus Anc_1.487, some similarities with uniprot|P32618 Saccharomyces cerevisiae YEL043w
YALI1_A12540g	Compare to YALI0A12353g, highly similar to uniprot|O93968 Candida boidinii Formate dehydrogenase
YALI1_A12601g	Compare to YALI0A12419g, no similarity
YALI1_A12617g	Compare to YALI0A12441g, no similarity
YALI1_A12638g	Compare to YALI0A12507g, no similarity
YALI1_A12688g	Compare to YALI0A12573g, weakly similar to uniprot|P08540 Kluyveromyces lactis Potential acid phosphatase
YALI1_A12729g	Compare to YALI0A12617g, no similarity, similar to Saccharomyces cerevisiae CUE2 (YKL090W); ancestral locus Anc_2.494
YALI1_A12756g	Compare to YALI0A12683g, some similarities with uniprot|Q9UST8 Schizosaccharomyces pombe Ribonuclease H
YALI1_A12772g	Truncated form of YALI0A12705g, similar to uniprot|Q9UST8 Schizosaccharomyces pombe Ribonuclease H
YALI1_A12852g	Compare to YALI0A12815g, no similarity
YALI1_A12868g	Compare to YALI0A12837g, no similarity possibly noncoding
YALI1_A12929g	Compare to YALI0A12925g, weakly similar to uniprot|P32338 Saccharomyces cerevisiae YGR044C Zinc finger protein RME1
YALI1_A12989g	Compare to YALI0A12969g, highly similar to uniprot|Q6C6A0 Yarrowia lipolytica YALI0E11187g
YALI1_A13019g	Compare to YALI0A13013g, weakly similar to uniprot|Q12303 Saccharomyces cerevisiae YLR121c YPS3 GPI-anchored aspartyl protease 3
YALI1_A13041g	Compare to YALI0A13035g, no similarity
YALI1_A13046g	Compare to YALI0A13057g, weakly similar to uniprot|P36159 Saccharomyces cerevisiae YKR079c, similar to Saccharomyces cerevisiae TRZ1 (YKR079C); ancestral locus Anc_5.671
YALI1_A13095g	Compare to YALI0A13079g, some similarities with uniprot|Q6C461 Yarrowia lipolytica YALI0E29425g
YALI1_A13100g	Compare to YALI0A13101g, weakly similar to uniprot|P34160 Saccharomyces cerevisiae YMR125w GCR3 large subunit of the nuclear cap- binding protein complex CBC singleton, similar to Saccharomyces cerevisiae STO1 (YMR125W); ancestral locus Anc_2.413
YALI1_A13287g	Compare to YALI0A13255g, no similarity
YALI1_A13349g	Compare to YALI0A13277g, similar to Saccharomyces cerevisiae ATG4 (YNL223W); ancestral locus Anc_2.18, weakly similar to uniprot|P53867 Saccharomyces cerevisiae YNL223w AUT2 essential for autophagy
YALI1_A13383g	Compare to YALI0A13299g, similar to Saccharomyces cerevisiae SRM1 (YGL097W); ancestral locus Anc_6.166, weakly similar to uniprot|P21827 Saccharomyces cerevisiae YGL097w SRM1 GDP/GTP exchange factor for GSP1P/GSP2P
YALI1_A13412g	Compare to YALI0A13321g, similar to Saccharomyces cerevisiae YPL260W; ancestral locus Anc_7.125, similar to uniprot|Q08977 Saccharomyces cerevisiae ORF YPL260W
YALI1_A13454g	Compare to YALI0A13387g, similar to Saccharomyces cerevisiae ASN2 (YGR124W) and ASN1 (YPR145W); ancestral locus Anc_3.483, highly similar to uniprot|P49090 Saccharomyces cerevisiae YGR124w ASN2 asparagine synthetase
YALI1_A13508g	Compare to YALI0A13497g, weakly similar to uniprot|Q7RYR1 Neurospora crassa NCU00399.1 hypothetical protein
YALI1_A13555g	Compare to YALI0A13519g, similar to Saccharomyces cerevisiae SKI2 (YLR398C); ancestral locus Anc_4.261, similar to uniprot|P35207 Saccharomyces cerevisiae YLR398c SKI2 antiviral protein and putative helicase
YALI1_A13566g	Compare to YALI0A13541g, similar to Saccharomyces cerevisiae MRPS35 (YGR165W); ancestral locus Anc_5.166, some similarities with uniprot|P53292 Saccharomyces cerevisiae YGR165w
YALI1_A13596g	Compare to YALI0A13563g, weakly similar to CA1840|CaIFP3 Candida albicans unknown function
YALI1_A13649g	Compare to YALI0A13585g, weakly similar to uniprot|P38069 Saccharomyces cerevisiae YBR015c TTP1(MNN2)
YALI1_A13682g	Compare to YALI0A13607g, no similarity
YALI1_A13713g	Compare to YALI0A13673g, highly similar to uniprot|Q6CGE4 Yarrowia lipolytica YALI0A20020g
YALI1_A13845g	Compare to YALI0A13849g, no similarity
YALI1_A13877g	Compare to YALI0A13937g, no similarity
YALI1_A13962g	Compare to YALI0A14069g, similar to uniprot|P38224 Saccharomyces cerevisiae YBR040W FIG1 required for efficient mating, similar to Saccharomyces cerevisiae FIG1 (YBR040W); ancestral locus Anc_3.242
YALI1_A13994g	Compare to YALI0A14157g, similar to Saccharomyces cerevisiae YHR100C; ancestral locus Anc_5.403, weakly similar to uniprot|P38812 Saccharomyces cerevisiae YHR100c
YALI1_A14024g	Compare to YALI0A14212g, similar to uniprot|Q96WT5 Aspergillus oryzae Maltose permease
YALI1_A14079g	Compare to YALI0A14234g, weakly similar to uniprot|AAN15615 Arabidopsis thaliana Putative 4-coumarate:CoA ligase 2 and to uniprot|P38137 Saccharomyces cerevisiae YBR222c PCS60 AMP- binding protein peroxisomal
YALI1_A14099g	Compare to YALI0A14256g, no similarity
YALI1_A14162g	Compare to YALI0A14322g, weakly similar to uniprot|Q6C8R9 Yarrowia lipolytica YALI0D17512g
YALI1_A14189g	Compare to YALI0A14366g, no similarity
YALI1_A14199g	Compare to YALI0A14388g, some similarities with CA3816|IPF4017 Candida albicans unknown function
YALI1_A14228g	Compare to YALI0A14454g, weakly similar to wi|NCU07869.1 Neurospora crassa NCU07869.1 predicted protein, similar to Saccharomyces cerevisiae NSG1 (YHR133C) and NSG2 (YNL156C); ancestral locus Anc_2.108
YALI1_A14259g	Compare to YALI0A14476g, some similarities with CA4130|IPF20009 Candida albicans unknown function, similar to Saccharomyces cerevisiae OPY1 (YBR129C); ancestral locus Anc_3.392
YALI1_A14287g	Compare to YALI0A14498g, similar to uniprot|Q03677 Saccharomyces cerevisiae YMR009w, similar to Saccharomyces cerevisiae ADI1 (YMR009W); ancestral locus Anc_7.113
YALI1_A14305g	Compare to YALI0A14520g, no similarity
YALI1_A14345g	Compare to YALI0A14542g, uniprot|Q8WZL8 Yarrowia lipolytica Transcriptional repressor
YALI1_A14368g	Compare to YALI0A14564g, no similarity
YALI1_A14390g	Compare to YALI0A14586g, similar to Saccharomyces cerevisiae NGG1 (YDR176W); ancestral locus Anc_8.374, weakly similar to uniprot|P32494 Saccharomyces cerevisiae YDR176w NGG1 general transcriptional adaptor or co-activator
YALI1_A14513g	Compare to YALI0A14608g, weakly similar to CA4833|IPF1216 Candida albicans IPF1216 unknown function
YALI1_A14568g	Compare to YALI0A14630g, weakly similar to wi|NCU07387.1 Neurospora crassa NCU07387.1 hypothetical protein
YALI1_A14596g	Converted to coding from non-coding YALI0A14674g, similar to Saccharomyces cerevisiae YCT1 (YLL055W), similar to uniprot|P15365 Saccharomyces cerevisiae DAL5 allantoate permease relics
YALI1_A14658g	Truncated form of YALI0A14707g, weakly similar to uniprot|Q09725 Schizosaccharomyces pombe Sister chromatid cohesion protein mis4, similar to Saccharomyces cerevisiae SCC2 (YDR180W); ancestral locus Anc_8.381
YALI1_A14670g	Compare to YALI0A14740g, weakly similar to uniprot|Q03984 Saccharomyces cerevisiae YDR179wa hypothetical protein, similar to Saccharomyces cerevisiae YDR179W-A; ancestral locus Anc_8.379
YALI1_A14703g	Compare to YALI0A14762g, some similarities with wi|NCU08342.1 Neurospora crassa NCU08342.1 hypothetical protein
YALI1_A14721g	Compare to YALI0A14784g, similar to Saccharomyces cerevisiae TIM18 (YOR297C); ancestral locus Anc_8.767, some similarities with uniprot|P37298 Saccharomyces cerevisiae YDR178w SDH4 succinate dehydrogenase membrane anchor subunit for SDH2P
YALI1_A14736g	Compare to YALI0A14806g, similar to uniprot|P11913 Neurospora crassa Mitochondrial processing peptidase beta subunit
YALI1_A14783g	Compare to YALI0A14839g, weakly similar to uniprot|P32361 Saccharomyces cerevisiae YHR079c IRE1 protein
YALI1_A14826g	Compare to YALI0A14861g, weakly similar to CA4834|IPF1217 Candida albicans unknown function
YALI1_A14882g	Compare to YALI0A14883g, weakly similar to uniprot|P38731 Saccharomyces cerevisiae YHL040c ARN1 ferrichrome-type siderophore transporter
YALI1_A14922g	Compare to YALI0A14905g, weakly similar to uniprot|Q6CBL4 Yarrowia lipolytica YALI0C17589g
YALI1_A14989g	Compare to YALI0A14927g, no similarity possibly noncoding
YALI1_A14999g	Compare to YALI0A14949g, weakly similar to uniprot|Q54222 Streptomyces galbus Putative RNaseH
YALI1_A15017t	Converted to coding from non-coding YALI0A14971g, Transposon:MudrA(mutyl), AJ621548 Yarrowia lipolytica transposon Mutyl MudrA relics
YALI1_A15040t	Converted to coding from non-coding YALI0A14971g, Transposon:MudrA(mutyl), AJ621548 Yarrowia lipolytica transposon Mutyl MudrA relics
YALI1_A15045g	Converted to coding from non-coding YALI0A15026g, no similarity
YALI1_A15053g	Converted to coding from non-coding YALI0A15026g, no similarity
YALI1_A15073g	Compare to YALI0A15059g, weakly similar to uniprot|Q9UST8 Schizosaccharomyces pombe Ribonuclease H
YALI1_A15079g	Compare to YALI0A15081g, similar to Saccharomyces cerevisiae YJL218W, similar to uniprot|Q09707 Schizosaccharomyces pombe Putative acetyltransferase
YALI1_A15105g	Compare to YALI0A15103g, weakly similar to uniprot|Q7S557 Neurospora crassa NCU03295.1 hypothetical protein
YALI1_A15132g	Compare to YALI0A15125g, similar to uniprot|P25297 Saccharomyces cerevisiae YML123c PHO84 Inorganic phosphate transporter
YALI1_A15227g	Compare to YALI0A15147g, similar to uniprot|Q9UW06 Yarrowia lipolytica Alcohol dehydrogenase 3, similar to Saccharomyces cerevisiae ADH6 (YMR318C)
YALI1_A15274g	Compare to YALI0A15169g, no similarity
YALI1_A15349g	Compare to YALI0A15257g, no similarity
YALI1_A15414g	Truncated form of YALI0A15345g, no similarity
YALI1_A15461g	Compare to YALI0A15378g, no similarity
YALI1_A15482g	Compare to YALI0A15400g, weakly similar to uniprot|Q92QU2 Rhizobium meliloti Putative acetyltransferase protein
YALI1_A15497g	Compare to YALI0A15422g, no similarity
YALI1_A15507g	Compare to YALI0A15433g, gnl|GLV|YALI0A15433g [Yarrowia lipolytica] similar to uniprot|Q91V16 Growth hormone-inducible soluble protein (Mus musculus adult male testis cDNA
YALI1_A15515g	Compare to YALI0A15444g, some similarities with uniprot|Q929M8 Listeria innocua Hypothetical protein lin2246
YALI1_A15528g	Compare to YALI0A15466g, similar to uniprot|Q6CGW7 Yarrowia lipolytica YALI0A15444g
YALI1_A15544g	Compare to YALI0A15488g, uniprot|O74133 Yarrowia lipolytica ALK7 cytochrome P450 CYP52 family member
YALI1_A15584g	Compare to YALI0A15554g, weakly similar to uniprot|O94459 Schizosaccharomyces pombe Hypothetical protein
YALI1_A15624g	Compare to YALI0A15576g, similar to uniprot|Q07824 Saccharomyces cerevisiae YLL028w TPO1 polyamine transport protein
YALI1_A15666g	Compare to YALI0A15598g, no similarity possibly noncoding
YALI1_A15675g	Compare to YALI0A15642g, no similarity
YALI1_A15720g	Compare to YALI0A15686g, similar to uniprot|P89105 Saccharomyces cerevisiae YOL145c CTR9 required for G1 cyclin expression, similar to Saccharomyces cerevisiae CTR9 (YOL145C); ancestral locus Anc_3.5
YALI1_A15722g	Compare to YALI0A15708g, similar to Saccharomyces cerevisiae NOP8 (YOL144W); ancestral locus Anc_3.6, weakly similar to uniprot|Q08287 Saccharomyces cerevisiae YOL144w 60S ribosome subunit biogenesis protein NOP8
YALI1_A15766g	Compare to YALI0A15752g, no similarity
YALI1_A15784g	Compare to YALI0A15774g, similar to uniprot|P47159 Saccharomyces cerevisiae YJR124c
YALI1_A15846g	Compare to YALI0A15884g, similar to uniprot|Q10430 Schizosaccharomyces pombe Hypothetical protein, similar to Saccharomyces cerevisiae SPC25 (YER018C); ancestral locus Anc_1.71
YALI1_A15863g	Compare to YALI0A15906g, similar to Saccharomyces cerevisiae YPR1 (YDR368W) and GCY1 (YOR120W); ancestral locus Anc_5.434, similar to uniprot|P14065 Saccharomyces cerevisiae YOR120w GCY1 galactose-induced protein of aldo/keto reductase family
YALI1_A15879g	Compare to YALI0A15950g, similar to Saccharomyces cerevisiae HIS4 (YCL030C); ancestral locus Anc_1.45, similar to uniprot|P00815 Saccharomyces cerevisiae YCL030c HIS4 phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase/histidinol dehydrogenase
YALI1_A15925g	Compare to YALI0A15972g, similar to Saccharomyces cerevisiae FBP1 (YLR377C); ancestral locus Anc_4.227, uniprot|Q7Z8Q0 Yarrowia lipolytica Fructose-1 6- bisphosphatase similar to uniprot|P09201 Saccharomyces cerevisiae YLR377c and similar to uniprot|P14065 YOR120W Saccharomyces cerevisiae
YALI1_A15961g	Compare to YALI0A16016g, no similarity
YALI1_A15978g	Compare to YALI0A16038g, highly similar to uniprot|Q6C9L7 Yarrowia lipolytica YALI0D10104g
YALI1_A16004g	Compare to YALI0A16060g, similar to Saccharomyces cerevisiae MCH1 (YDL054C); ancestral locus Anc_4.229, weakly similar to uniprot|Q07376 Saccharomyces cerevisiae YDL054c MCH1
YALI1_A16028g	Compare to YALI0A16082g, weakly similar to uniprot|Q9UST8 Schizosaccharomyces pombe Ribonuclease H
YALI1_A16075g	Compare to YALI0A16148g, some similarities with uniprot|Q9UST8 Schizosaccharomyces pombe Ribonuclease H
YALI1_A16095g	Compare to YALI0A16170g, no similarity
YALI1_A16121g	Compare to YALI0A16214g, weakly similar to uniprot|P53832 Saccharomyces cerevisiae YNL283C Cell wall integrity and stress response component 2 precursor
YALI1_A16215g	Compare to YALI0A16291g, weakly similar to uniprot|Q06681 Saccharomyces cerevisiae YDR326c
YALI1_A16264g	Compare to YALI0A16313g, no similarity
YALI1_A16292g	Compare to YALI0A16379g, uniprot|Q9UW06 Yarrowia lipolytica Alcohol dehydrogenase 3
YALI1_A16335g	Compare to YALI0A16401g, no similarity
YALI1_A16392g	Compare to YALI0A16423g, weakly similar to uniprot|Q6CE33 Yarrowia lipolytica YALI0B18942g
YALI1_A16422g	Compare to YALI0A16445g, similar to uniprot|Q877A0 Aspergillus oryzae amine oxidase
YALI1_A16461g	Truncated form of YALI0A16467g, similar to uniprot|Q07789 Saccharomyces cerevisiae YDR031w Chromosome IV reading frame ORF YDR031W, similar to Saccharomyces cerevisiae MIC14 (YDR031W); ancestral locus Anc_3.260
YALI1_A16466g	Compare to YALI0A16489g, similar to uniprot|Q9HDZ9 Schizosaccharomyces pombe Conserved hypothetical protein putative glycoprotein
YALI1_A16485g	Compare to YALI0A16511g, no similarity
YALI1_A16501g	Compare to YALI0A16566g, some similarities with wi|NCU02000.1 Neurospora crassa NCU02000.1 hypothetical protein, similar to Saccharomyces cerevisiae YSF3 (YNL138W-A); ancestral locus Anc_2.126
YALI1_A16509g	Compare to YALI0A16588g, weakly similar to uniprot|P53552 Saccharomyces cerevisiae YNL139c RLR1 regulatory protein, similar to Saccharomyces cerevisiae RLR1 (YNL139C); ancestral locus Anc_2.125
YALI1_A16618g	Compare to YALI0A16610g, weakly similar to uniprot|Q871S2 Neurospora crassa Related to acid sphingomyelinase
YALI1_A16642g	Compare to YALI0A16698g, similar to Saccharomyces cerevisiae YPR118W; ancestral locus Anc_3.451, similar to uniprot|Q06489 Saccharomyces cerevisiae YPR118w
YALI1_A16681g	Compare to YALI0A16720g, no similarity
YALI1_A16712g	Converted to coding from non-coding YALI0A16753g, weakly similar to uniprot|Q04740 Saccharomyces cerevisiae YMR234w RNH1 ribonuclease H RnaseH domain protein
YALI1_A16745g	Compare to YALI0A16775g, weakly similar to uniprot|P47017 Saccharomyces cerevisiae YJL124c LSM1 Sm-like (Lsm) protein, similar to Saccharomyces cerevisiae LSM1 (YJL124C); ancestral locus Anc_1.230
YALI1_A16770g	Compare to YALI0A16797g, weakly similar to uniprot|Q92331|VPS5_YEAST Vacuolar protein sorting-associated protein(YOR069w)
YALI1_A16787g	Compare to YALI0A16819g, weakly similar to uniprot|P43093 Candida albicans Candidapepsin 4 precursor (Aspartate protease 4)
YALI1_A16891g	Compare to YALI0A16841g, weakly similar to uniprot|P41696 Saccharomyces cerevisiae YOR113w AZF1 asparagine-rich zinc finger protein
YALI1_A16988g	Compare to YALI0A16863g, similar to Saccharomyces cerevisiae FLX1 (YIL134W); ancestral locus Anc_2.227, similar to uniprot|P40464 Saccharomyces cerevisiae YIL134w Mitochondrial FAD carrier protein FLX1
YALI1_A17085g	Compare to YALI0A17020g, no similarity
YALI1_A17118g	Compare to YALI0A17039g, no similarity
YALI1_A17123g	Compare to YALI0A17061g, similar to DEHA0C06897g Debaryomyces hansenii, similar to Saccharomyces cerevisiae DAD2 (YKR083C); ancestral locus Anc_5.676
YALI1_A17177g	Compare to YALI0A17127g, similar to uniprot|P22137 Saccharomyces cerevisiae YGL206c CHC1 Clathrin heavy chain, similar to Saccharomyces cerevisiae CHC1 (YGL206C); ancestral locus Anc_3.515
YALI1_A17234g	Compare to YALI0A17149g, weakly similar to uniprot|P38724 Saccharomyces cerevisiae YHL047c TAF1 siderophore transporter for triacetylfusarinine C
YALI1_A17289g	Compare to YALI0A17171g, similar to uniprot|P53049 Saccharomyces cerevisiae YGR281w YOR1 ATP-binding cassette transporter protein
YALI1_A17328g	Compare to YALI0A17193g, no similarity
YALI1_A17348g	Compare to YALI0A17215g, no similarity
YALI1_A17383g	Compare to YALI0A17237g, weakly similar to uniprot|Q871C2 Neurospora crassa NCU07197.1 predicted protein
YALI1_A17401g	Compare to YALI0A17259g, no similarity
YALI1_A17419g	Compare to YALI0A17281g, similar to uniprot|Q8X8M5 Escherichia coli Orf hypothetical protein
YALI1_A17433g	Compare to YALI0A17292g, weakly similar to uniprot|P40507 Saccharomyces cerevisiae YIL079c
YALI1_A17450g	Compare to YALI0A17314g, similar to uniprot|Q9P3X9 Neurospora crassa Peptidyl- prolyl cis-trans isomerase
YALI1_A17470g	Compare to YALI0A17336g, similar to uniprot|P43563 Saccharomyces cerevisiae YFL034C-B MOB2 component of the RAM signaling network, localizes and activates the Ace2p in the daughter cell nucleus to direct daughter cell-specific transcription of several genes involved in cell separation; Mob1p-like protein, similar to Saccharomyces cerevisiae MOB2 (YFL034C-B); ancestral locus Anc_8.29
YALI1_A17486g	Compare to YALI0A17358g, weakly similar to uniprot|P39937 Saccharomyces cerevisiae YER007w PAC2 involved in the stabilization of microtubles, similar to Saccharomyces cerevisiae PAC2 (YER007W); ancestral locus Anc_7.151
YALI1_A17511g	Compare to YALI0A17380g, similar to uniprot|P89886 Saccharomyces cerevisiae YER007ca, similar to Saccharomyces cerevisiae TMA20 (YER007C-A); ancestral locus Anc_7.152
YALI1_A17515g	Compare to YALI0A17424g, weakly similar to uniprot|P42841 Saccharomyces cerevisiae YNL317w PFS2 polyadenylation factor I subunit 2 required for mRNA 3'-end processing bridges two mRNA 3'- end processing factors
YALI1_A17546g	Compare to YALI0A17446g, no similarity
YALI1_A17570g	Compare to YALI0A17468g, similar to uniprot|P07143 Saccharomyces cerevisiae YOR065w CYT1 cytochrome-c1, similar to Saccharomyces cerevisiae CYT1 (YOR065W); ancestral locus Anc_5.666
YALI1_A17583g	Compare to YALI0A17490g, no similarity, similar to Saccharomyces cerevisiae YNG1 (YOR064C); ancestral locus Anc_5.665
YALI1_A17622g	Compare to YALI0A17512g, similar to uniprot|P40351 Saccharomyces cerevisiae YOR067c ALG8 Dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha- 1 3-glucosyltransferase, similar to Saccharomyces cerevisiae ALG8 (YOR067C); ancestral locus Anc_5.669
YALI1_A17640g	Compare to YALI0A17534g, weakly similar to uniprot|P53389 Saccharomyces cerevisiae YNR055c HOL1 member of major facilitator superfamily multidrug-resistance protein subfamily 1
YALI1_A17651g	Compare to YALI0A17556g, no similarity
YALI1_A17671g	Compare to YALI0A17578g, some similarities with uniprot|P32019 Type II inositol- 1 4 5-trisphosphate 5-phosphatase precursor and other Phosphoinositide 5-phosphatase, similar to Saccharomyces cerevisiae INP54 (YOL065C); ancestral locus Anc_3.155
YALI1_A17720g	Compare to YALI0A17600g, similar to Saccharomyces cerevisiae ERV41 (YML067C); ancestral locus Anc_4.330, weakly similar to uniprot|Q04651 Saccharomyces cerevisiae YML067c ERV41 component of copii vesicles involved in transport between the ER and golgi complex
YALI1_A17749g	Compare to YALI0A17666g, weakly similar to uniprot|P53322 Saccharomyces cerevisiae YGR260w TNA1 similarity to allantoate transport protein
YALI1_A17824g	Truncated form of YALI0A17776g, no similarity
YALI1_A17876t	Partial Line element
YALI1_A17927g	Compare to YALI0A17809g, similar to Saccharomyces cerevisiae PSY2 (YNL201C); ancestral locus Anc_2.48, weakly similar to uniprot|P40164 Saccharomyces cerevisiae YNL201c
YALI1_A17957g	Compare to YALI0A17831g, no similarity
YALI1_A18010g	Truncated form of YALI0A17853g, no similarity
YALI1_A18036g	Truncated form of YALI0A17853g, similar to Saccharomyces cerevisiae NET1 (YJL076W) and TOF2 (YKR010C); ancestral locus Anc_1.294, no similarity
YALI1_A18062g	Compare to YALI0A17875g, similar to uniprot|Q04458 Saccharomyces cerevisiae YMR110c aldehyde-dehydrogenase like protein
YALI1_A18076g	Compare to YALI0A17897g, no similarity
YALI1_A18133g	Compare to YALI0A17919g, similar to uniprot|P38288 Saccharomyces cerevisiae YBR162c (TOS1)
YALI1_A18166g	Compare to YALI0A17941g, highly similar to uniprot|Q03195 Saccharomyces cerevisiae YDR091c RLI1, similar to Saccharomyces cerevisiae RLI1 (YDR091C); ancestral locus Anc_8.227
YALI1_A18188g	Compare to YALI0A17946g, gnl|GLV|YALI0A17946g [Yarrowia lipolytica] weakly similar to uniprot|Q7RVJ6 Neurospora crassa NADH- ubiquinone oxidoreductase 12 KD subunit precursor (ComplexI-12KD)
YALI1_A18219g	Compare to YALI0A17963g, highly similar to uniprot|Q6CHJ4 Yarrowia lipolytica YALI0A08195g
YALI1_A18273g	Compare to YALI0A17985g, weakly similar to uniprot|P14906 Saccharomyces cerevisiae YOR254c SEC63 ER protein-translocation complex subunit NPL1
YALI1_A18286g	Compare to YALI0A18007g, similar to uniprot|Q99257 Saccharomyces cerevisiae YPL169c MEX67 factor for nuclear mRNA export
YALI1_A18315g	Compare to YALI0A18029g, no similarity
YALI1_A18344g	Compare to YALI0A18062g, similar to Saccharomyces cerevisiae ERG5 (YMR015C); ancestral locus Anc_2.562, similar to uniprot|P54781 Saccharomyces cerevisiae YMR015c ERG5 C-22 sterol desaturase
YALI1_A18414g	Compare to YALI0A18139g, no similarity
YALI1_A18439g	Compare to YALI0A18161g, weakly similar to uniprot|O74919 Schizosaccharomyces pombe Rna binding protein-putative pre mRNA splicing factor and to to uniprot|P38151 Saccharomyces cerevisiae YBR233w PAB1-binding protein 2
YALI1_A18514g	Compare to YALI0A18183g, similar to uniprot|P19807 Saccharomyces cerevisiae YGL077c HNM1 choline permease
YALI1_A18557g	Compare to YALI0A18205g, similar to uniprot|P32905 Saccharomyces cerevisiae YGR214w NAB1A 40S ribosomal protein p40 homolog A, similar to Saccharomyces cerevisiae RPS0A (YGR214W) and RPS0B (YLR048W); ancestral locus Anc_5.116
YALI1_A18622g	Compare to YALI0A18227g, similar to Saccharomyces cerevisiae BIM1 (YER016W); ancestral locus Anc_7.167, similar to uniprot|P40013 Saccharomyces cerevisiae YER016w BIM1 binding to microtubules
YALI1_A18660g	Compare to YALI0A18249g, some similarities with DEHA-IPF3000.1 Debaryomyces hansenii DEHA0D15576g
YALI1_A18752g	Compare to YALI0A18271g, no similarity
YALI1_A18805g	Compare to YALI0A18293g, similar to Saccharomyces cerevisiae SEN54 (YPL083C); ancestral locus Anc_8.559, weakly similar to uniprot|Q02825 Saccharomyces cerevisiae YPL083c SEN54 tRNA splicing endonuclease alpha subunit
YALI1_A18817g	Compare to YALI0A18315g, similar to Saccharomyces cerevisiae SGF11 (YPL047W); ancestral locus Anc_8.496, no similarity
YALI1_A18847g	Compare to YALI0A18337g, similar to uniprot|Q12354 Saccharomyces cerevisiae YLR118c similarity to several esterases singleton, similar to Saccharomyces cerevisiae YLR118C; ancestral locus Anc_8.314
YALI1_A18897g	Compare to YALI0A18359g, similar to Saccharomyces cerevisiae YPL066W; ancestral locus Anc_8.530, similar to uniprot|Q7SC90 Neurospora crassa NCU08511.1 hypothetical protein
YALI1_A18915g	Compare to YALI0A18381g, weakly similar to uniprot|P48059 Homo sapiens PINCH protein (Particularly interesting new Cys-His protein)
YALI1_A19025g	Compare to YALI0A18403g, no similarity
YALI1_A19070g	Compare to YALI0A18425g, similar to uniprot|Q881B2 Pseudomonas syringae Xenobiotic compound monooxygenase(DszA family)
YALI1_A19214g	Truncated form of YALI0A18469g, uniprot|Q99160 Yarrowia lipolytica Homeobox protein HOY1
YALI1_A19220g	Truncated form of YALI0A18469g, uniprot|Q99160 Yarrowia lipolytica Homeobox protein HOY1
YALI1_A19398g	Compare to YALI0A18524g, no similarity
YALI1_A19419g	Compare to YALI0A18546g, no similarity
YALI1_A19428g	Compare to YALI0A18568g, similar to Saccharomyces cerevisiae CWC27 (YPL064C); ancestral locus Anc_8.528, weakly similar to uniprot|Q02770 Saccharomyces cerevisiae YPL064c CWC27 putative peptidyl-prolyl cis- trans isomerase
YALI1_A19459g	Compare to YALI0A18590g, similar to uniprot|Q7S3A6 Neurospora crassa probable dis1-suppressing protein kinase dsk1
YALI1_A19483g	Compare to YALI0A18612g, similar to uniprot|P32496 Saccharomyces cerevisiae YFR052w NIN1 26S proteasome regulatory subunit, similar to Saccharomyces cerevisiae RPN12 (YFR052W); ancestral locus Anc_3.580
YALI1_A19515g	Compare to YALI0A18634g, no similarity
YALI1_A19526g	Compare to YALI0A18656g, weakly similar to DEHA0B03113g Debaryomyces hansenii
YALI1_A19549g	Compare to YALI0A18678g, no similarity, similar to Saccharomyces cerevisiae YPL107W; ancestral locus Anc_8.591
YALI1_A19563g	Compare to YALI0A18700g, weakly similar to DEHA0D17149g Debaryomyces hansenii IPF 2883.1
YALI1_A19595g	Compare to YALI0A18722g, similar to Saccharomyces cerevisiae VPS28 (YPL065W); ancestral locus Anc_8.529, uniprot|Q8WZL1 Yarrowia lipolytica Vps28 protein
YALI1_A19650g	Truncated form of YALI0A18744g, weakly similar to uniprot|Q03897 Saccharomyces cerevisiae YDR128w
YALI1_A19675g	Truncated form of YALI0A18744g, weakly similar to uniprot|Q03897 Saccharomyces cerevisiae YDR128w, similar to Saccharomyces cerevisiae YDR128W; ancestral locus Anc_8.288
YALI1_A19725g	Compare to YALI0A18766g, weakly similar to uniprot|P48582 Saccharomyces cerevisiae YPL084w BRO1 required for normal response to nutrient limitation
YALI1_A19731g	Compare to YALI0A18788g, weakly similar to uniprot|O59668 Schizosaccharomyces pombe Hypothetical zf-C3HC4 zinc finger protein, similar to Saccharomyces cerevisiae RMD5 (YDR255C); ancestral locus Anc_8.495
YALI1_A19759g	Compare to YALI0A18810g, similar to uniprot|P00729 Saccharomyces cerevisiae YMR297w PRC1 carboxypeptidase y serine-type protease
YALI1_A19795g	Compare to YALI0A18832g, similar to uniprot|Q9URL7 Candida albicans Peptide transport protein
YALI1_A19829g	Compare to YALI0A18898g, weakly similar to uniprot|Q96UB6 Neurospora crassa Conserved hypothetical protein, similar to Saccharomyces cerevisiae SSH4 (YKL124W); ancestral locus Anc_2.448
YALI1_A19862g	Compare to YALI0A18920g, similar to uniprot|P38776 Saccharomyces cerevisiae YHR048w related to multidrug resistance proteins
YALI1_A19885g	Compare to YALI0A18942g, similar to Saccharomyces cerevisiae SRP21 (YKL122C); ancestral locus Anc_2.449, some similarities with uniprot|P32342 Saccharomyces cerevisiae YKL122c SRP21 signal recognition particle subunit
YALI1_A19898g	Compare to YALI0A18964g, no similarity
YALI1_A19924g	Compare to YALI0A18986g, similar to Saccharomyces cerevisiae YHL017W and PTM1 (YKL039W); ancestral locus Anc_2.552, weakly similar to uniprot|P32857 Saccharomyces cerevisiae YKL039w PTM1 member of the major facilitator superfamily
YALI1_A19965g	Compare to YALI0A19008g, similar to Saccharomyces cerevisiae PEP3 (YLR148W); ancestral locus Anc_8.359, similar to uniprot|Q9C2Y9 Emericella nidulans DigA protein
YALI1_A19974g	Compare to YALI0A19030g, similar to uniprot|P43321 Saccharomyces cerevisiae YLR147c SMD3 spliceosomal snRNA-associated Sm core protein required for pre-mRNA splicing, similar to Saccharomyces cerevisiae SMD3 (YLR147C); ancestral locus Anc_8.358
YALI1_A19989g	Compare to YALI0A19052g, weakly similar to uniprot|P89102 Saccharomyces cerevisiae YDR166c SEC5 required for exocytosis, similar to Saccharomyces cerevisiae SEC5 (YDR166C); ancestral locus Anc_8.357
YALI1_A20063g	Compare to YALI0A19074g, similar to Saccharomyces cerevisiae GDB1 (YPR184W); ancestral locus Anc_7.541, similar to uniprot|O93808 Saccharomyces cerevisiae YPR184W Oligo-1 4-1 4-glucantransferase / amylo-1 6- glucosidase
YALI1_A20089g	Compare to YALI0A19096g, similar to Saccharomyces cerevisiae HTD2 (YHR067W); ancestral locus Anc_5.341, weakly similar to to uniprot|Q89E40 Bradyrhizobium japonicum Hypothetical cytosolic protein
YALI1_A20113g	Compare to YALI0A19118g, no similarity
YALI1_A20129g	Compare to YALI0A19140g, similar to Saccharomyces cerevisiae YLR003C; ancestral locus Anc_5.228, similar to uniprot|Q07897 Saccharomyces cerevisiae YLR003c
YALI1_A20131g	Compare to YALI0A19162g, no similarity
YALI1_A20149g	Compare to YALI0A19184g, weakly similar to CAGL0D03916g Candida glabrata, similar to Saccharomyces cerevisiae PIH1 (YHR034C); ancestral locus Anc_5.317
YALI1_A20176g	Truncated form of YALI0A19206g, similar to Saccharomyces cerevisiae PRO1 (YDR300C) and YHR033W; ancestral locus Anc_5.318, similar to uniprot|P32264 Saccharomyces cerevisiae YDR300c PRO1 glutamate 5-kinase
YALI1_A20201g	Compare to YALI0A19228g, similar to uniprot|Q9P7F3 Schizosaccharomyces pombe Ammonium transporter
YALI1_A20221g	Compare to YALI0A19250g, no similarity
YALI1_A20229g	Compare to YALI0A19272g, no similarity
YALI1_A20247g	Compare to YALI0A19316g, no similarity
YALI1_A20258g	Compare to YALI0A19338g, no similarity
YALI1_A20283g	Compare to YALI0A19360g, no similarity
YALI1_A20320g	Truncated form of YALI0A19404g, similar to uniprot|Q00416 Saccharomyces cerevisiae YLR430w SEN1 positive effector of tRNA-splicing endonuclease, similar to Saccharomyces cerevisiae SEN1 (YLR430W); ancestral locus Anc_4.310
YALI1_A20353g	Truncated form of YALI0A19404g, similar to uniprot|Q00416 Saccharomyces cerevisiae YLR430w SEN1 positive effector of tRNA-splicing endonuclease
YALI1_A20370g	Compare to YALI0A19426g, similar to uniprot|P34227 Saccharomyces cerevisiae YBL064c strong similarity to thiol-specific antioxidant enzyme
YALI1_A20398g	Compare to YALI0A19448g, weakly similar to uniprot|P38067 Saccharomyces cerevisiae YBR006w UGA2 succinate semialdehyde dehydrogenase
YALI1_A20408g	Compare to YALI0A19470g, similar to uniprot|Q06440 Saccharomyces cerevisiae YLR429w CRN1 a coronin that promotes actin polymerization and crosslinking to microtubules, similar to Saccharomyces cerevisiae MDV1 (YJL112W) and CAF4 (YKR036C); ancestral locus Anc_1.247
YALI1_A20441g	Compare to YALI0A19492g, similar to uniprot|Q7SGF7 Neurospora crassa NCU00965.1 predicted protein, similar to Saccharomyces cerevisiae SPC2 (YML055W); ancestral locus Anc_4.307
YALI1_A20453g	Compare to YALI0A19514g, similar to uniprot|Q06436 Saccharomyces cerevisiae YLR427w, similar to Saccharomyces cerevisiae MAG2 (YLR427W); ancestral locus Anc_4.308
YALI1_A20484g	Compare to YALI0A19536g, similar to Saccharomyces cerevisiae YLR426W; ancestral locus Anc_4.306, weakly similar to uniprot|Q873D6 Neurospora crassa B17B1.060
YALI1_A20528g	Compare to YALI0A19558g, similar to uniprot|P32837 Saccharomyces cerevisiae YDL210W GABA-specific permease (GABA-specific transport protein)
YALI1_A20558g	Compare to YALI0A19580g, weakly similar to uniprot|P39109 Saccharomyces cerevisiae YDR135c YCF1 glutathione S-conjugate transporter (vacuolar)
YALI1_A20602g	Compare to YALI0A19602g, similar to Saccharomyces cerevisiae FPR2 (YDR519W); ancestral locus Anc_1.28, similar to uniprot|Q38935 Arabidopsis thaliana FK506- binding protein 2-1 precursor (EC 5.2.1.8) (Peptidyl- prolyl cis- transisomerase) (PPiase) (Rotamase) (15 kDa FKBP)(FKBP-15-1)
YALI1_A20611g	Compare to YALI0A19624g, weakly similar to uniprot|P25576 Saccharomyces cerevisiae YCL047c Hypothetical 29.7 kDa protein in APA1/DTP-PDI1 intergenic region, similar to Saccharomyces cerevisiae YCL047C; ancestral locus Anc_1.27
YALI1_A20631g	Compare to YALI0A19646g, weakly similar to uniprot|O14064 Schizosaccharomyces pombe Bir1 protein (Chromosome segregation protein cut17), similar to Saccharomyces cerevisiae BIR1 (YJR089W); ancestral locus Anc_7.460
YALI1_A20685g	Compare to YALI0A19668g, weakly similar to uniprot|Q12221 Saccharomyces cerevisiae YPR042c PUF2 similarity to JSN1P, similar to Saccharomyces cerevisiae JSN1 (YJR091C) and PUF2 (YPR042C); ancestral locus Anc_7.462
YALI1_A20739g	Compare to YALI0A19690g, no similarity
YALI1_A20793g	Compare to YALI0A19712g, similar to Saccharomyces cerevisiae CDC27 (YBL084C); ancestral locus Anc_7.412, similar to uniprot|P10505 Schizosaccharomyces pombe Nuclear scaffold-like protein p76
YALI1_A20822g	Compare to YALI0A19734g, no similarity
YALI1_A20849g	Compare to YALI0A19756g, similar to Saccharomyces cerevisiae LSM4 (YER112W); ancestral locus Anc_7.410, weakly similar to uniprot|P40070 Saccharomyces cerevisiae YER112w USS1 Sm-like (Lsm) protein
YALI1_A20855g	Compare to YALI0A19778g, similar to Saccharomyces cerevisiae SWI4 (YER111C); ancestral locus Anc_7.409, weakly similar to uniprot|P39678 Saccharomyces cerevisiae YDL056w MBP1 transcription factor subunit of the MBF factor
YALI1_A20884g	Compare to YALI0A19800g, similar to Saccharomyces cerevisiae YGR117C; ancestral locus Anc_3.466, no similarity
YALI1_A20902g	Compare to YALI0A19822g, weakly similar to uniprot|Q9HEF4 Neurospora crassa Conserved hypothetical protein
YALI1_A20937g	Compare to YALI0A19844g, weakly similar to uniprot|Q01371 Neurospora crassa White collar 1 protein (WC1)
YALI1_A20965g	Truncated form of YALI0A19866g, no similarity
YALI1_A20995g	Compare to YALI0A19888g, similar to CA4004|IPF4256 Candida albicans unknown function
YALI1_A21000g	Compare to YALI0A19910g, similar to uniprot|P47137 Saccharomyces cerevisiae Probable oxidoreductase YJR096W
YALI1_A21021g	Compare to YALI0A19932g, no similarity
YALI1_A21040g	Compare to YALI0A19954g, similar to uniprot|P32461 Saccharomyces cerevisiae YKL191w DPH2 diphtheria toxin resistance protein, similar to Saccharomyces cerevisiae DPH2 (YKL191W); ancestral locus Anc_4.293
YALI1_A21043g	Compare to YALI0A19976g, similar to uniprot|P25296 Saccharomyces cerevisiae YKL190w CNB1 calcineurin B regulatory subunit, similar to Saccharomyces cerevisiae CNB1 (YKL190W); ancestral locus Anc_4.292
YALI1_A21057g	Compare to YALI0A19998g, highly similar to uniprot|Q6CH17 Yarrowia lipolytica YALI0A13695g
YALI1_A21089g	Converted to coding from non-coding YALI0A20020g, highly similar to uniprot|Q6CH18 Yarrowia lipolytica YALI0A13673g
YALI1_A21106g	Compare to YALI0A20064g, no similarity
YALI1_A21120g	Compare to YALI0A20086g, weakly similar to uniprot|P38796 Saccharomyces cerevisiae YHR075c PPE1 ribosomal protein of the small subunit mitochondrial singleton, similar to Saccharomyces cerevisiae PPE1 (YHR075C); ancestral locus Anc_5.358
YALI1_A21156g	Compare to YALI0A20108g, similar to Saccharomyces cerevisiae QNS1 (YHR074W); ancestral locus Anc_5.357, highly similar to uniprot|P38795 Saccharomyces cerevisiae YHR074w QNS1 Putative glutamine-dependent NAD(+) synthetase
YALI1_A21175g	Compare to YALI0A20130g, similar to uniprot|O74129 Yarrowia lipolytica ALK3 cytochrome P450
YALI1_A21203g	Compare to YALI0A20152g, highly similar to uniprot|P32324 Saccharomyces cerevisiae YOR133w and highly similar to uniprot|P32324 Saccharomyces cerevisiae YDR385W EFT1 translation elongation factor eEF2
YALI1_A21236g	Compare to YALI0A20174g, no similarity
YALI1_A21265g	Compare to YALI0A20207g, some similarities with uniprot|Q9P3G4 Neurospora crassa Conserved hypothetical protein
YALI1_A21283g	Compare to YALI0A20273g, weakly similar to uniprot|P38993 Saccharomyces cerevisiae YMR058w FET3 cell surface ferroxidase (high affinity)
YALI1_A21311g	Compare to YALI0A20295g, similar to Saccharomyces cerevisiae CPD1 (YGR247W); ancestral locus Anc_5.79, weakly similar to uniprot|P53314 Saccharomyces cerevisiae YGR247w CPD1 Cyclic nucleotide PhosphoDiesterase
YALI1_A21345g	Compare to YALI0A20328g, similar to uniprot|P20448 Saccharomyces cerevisiae YJL033w HCA4 can suppress the U14 snoRNA rRNA processing function
YALI1_A21372g	Compare to YALI0A20350g, uniprot|Q9P8F7 Yarrowia lipolytica Triacylglycerol lipase precursor
YALI1_A21409g	Compare to YALI0A20372g, similar to Saccharomyces cerevisiae HUL5 (YGL141W); ancestral locus Anc_2.335, weakly similar to uniprot|P53119 Saccharomyces cerevisiae YGL141w HUL ubiquitin-protein ligase
YALI1_A21420g	Compare to YALI0A20394g, similar to Saccharomyces cerevisiae DAP1 (YPL170W); ancestral locus Anc_8.701, weakly similar to uniprot|Q12091 Saccharomyces cerevisiae YPL170W relared to C.elegans LIM homeobox protein
YALI1_A21449g	Compare to YALI0A20416g, similar to Saccharomyces cerevisiae TRE2 (YOR256C) and TRE1 (YPL176C); ancestral locus Anc_8.702, weakly similar to uniprot|Q08919 Saccharomyces cerevisiae YPL176c SSP134 related to transferrin receptor protein
YALI1_A21477g	Compare to YALI0A20438g, similar to uniprot|P36091 Saccharomyces cerevisiae YKL046C Hypothetical 49.6 kDa protein in ELM1-PRI2 intergenic region
YALI1_A21499g	Compare to YALI0A20460g, no similarity
YALI1_A21509g	Compare to YALI0A20482g, similar to uniprot|P32363 Saccharomyces cerevisiae YPL175w SPT14 N-acetylglucosaminyltransferase, similar to Saccharomyces cerevisiae SPT14 (YPL175W); ancestral locus Anc_8.703
YALI1_A21550g	Compare to YALI0A20504g, similar to Saccharomyces cerevisiae NIP100 (YPL174C); ancestral locus Anc_8.704, weakly similar to uniprot|Q8WZS2 Neurospora crassa Dynactin (150 kDa dynein-associated polypeptide) ro-3
YALI1_A21554g	Compare to YALI0A20518g, similar to uniprot|P06704 Saccharomyces cerevisiae YOR257w CDC31 spindle pole body component centrin, similar to Saccharomyces cerevisiae CDC31 (YOR257W); ancestral locus Anc_8.705
YALI1_A21565g	Compare to YALI0A20526g, some similarities with uniprot|P36534 Saccharomyces cerevisiae YPL173W Mitochondrial 60S ribosomal protein L40 (YmL40), similar to Saccharomyces cerevisiae MRPL40 (YPL173W); ancestral locus Anc_8.706
YALI1_A21594g	Truncated form of YALI0A20548g, no similarity
YALI1_A21617g	Compare to YALI0A20570g, similar to uniprot|Q08913 Saccharomyces cerevisiae YOR390w
YALI1_A21620g	Compare to YALI0A20592g, no similarity
YALI1_A21630g	Compare to YALI0A20614g, similar to Saccharomyces cerevisiae RRP9 (YPR137W); ancestral locus Anc_3.474, similar to uniprot|Q06506 Saccharomyces cerevisiae YPR137W of the beta-transducin family of guanine nucleotide-binding
YALI1_A21654g	Compare to YALI0A20636g, similar to Saccharomyces cerevisiae CTF4 (YPR135W); ancestral locus Anc_3.473, some similarities with uniprot|Q01454 Saccharomyces cerevisiae YPR135w POB1 DNA-directed DNA polymerase alpha- binding protein
YALI1_A21696g	Compare to YALI0A20658g, no similarity
YALI1_A21711g	Truncated form of YALI0A20680g, similar to uniprot|P21976 Neurospora crassa NADH- ubiquinone oxidoreductase 20.8 kDa subunit
YALI1_A21720g	Compare to YALI0A20702g, similar to uniprot|P48837 Saccharomyces cerevisiae YGR119c NUP57 nuclear pore protein, similar to Saccharomyces cerevisiae NUP57 (YGR119C); ancestral locus Anc_3.471
YALI1_A21746g	Compare to YALI0A20724g, similar to uniprot|Q06505 Saccharomyces cerevisiae YPR133c, similar to Saccharomyces cerevisiae SPN1 (YPR133C); ancestral locus Anc_3.468
YALI1_A21775g	Compare to YALI0A20746g, highly similar to uniprot|P32827 Saccharomyces cerevisiae YPR132W 40S ribosomal protein S23 (S28) (YS14) (RP37), similar to Saccharomyces cerevisiae YNR036C; ancestral locus Anc_6.352
YALI1_A21797g	Compare to YALI0A20768g, similar to uniprot|P36048 Saccharomyces cerevisiae YKL173w GIN10 U5 snRNP-specific protein
YALI1_A21835g	Truncated form of YALI0A20790g, no similarity
YALI1_A21841g	Truncated form of YALI0A20790g, no similarity
YALI1_A21871g	Compare to YALI0A20812g, no similarity
YALI1_A21913g	Compare to YALI0A20834g, weakly similar to uniprot|Q02959 Saccharomyces cerevisiae YPL116W HOS3 protein, similar to Saccharomyces cerevisiae HOS3 (YPL116W); ancestral locus Anc_8.607
YALI1_A21919g	Compare to YALI0A20867g, YALI-IPF40170 YALI0A20856g YALI0A20878g weakly similar to uniprot|Q12159 Saccharomyces cerevisiae YDR381w YRA1 RNA annealing protein, similar to Saccharomyces cerevisiae YRA1 (YDR381W); ancestral locus Anc_5.458
YALI1_A21945g	Compare to YALI0A20900g, weakly similar to uniprot|O94674 Schizosaccharomyces pombe Hypothetical protein, similar to Saccharomyces cerevisiae YOR129C; ancestral locus Anc_5.457
YALI1_A21970g	Compare to YALI0A20922g, similar to Saccharomyces cerevisiae GPI14 (YJR013W); ancestral locus Anc_5.147, similar to wi|NCU06057.1 Neurospora crassa NCU06057. 1
YALI1_A21993g	Compare to YALI0A20944g, similar to uniprot|Q8WZW4 Neurospora crassa Related to peroxisomal membrane protein PMP47B
YALI1_A22008g	Compare to YALI0A20966g, similar to ca|CA5143|IPF1020 Candida albicans IPF1020
YALI1_A22023g	Compare to YALI0A20988g, ancestral locus Anc_5.149, similar to CA5146|CaYMC2 Candida albicans CaYMC2 Carnitine/acylcarnitine translocase
YALI1_A22027g	Compare to YALI0A21010g, similar to Saccharomyces cerevisiae YLL014W; ancestral locus Anc_5.195, similar to DEHA0G19789g Debaryomyces hansenii IPF 5158.1
YALI1_A22073g	Compare to YALI0A21076g, similar to Saccharomyces cerevisiae YPP1 (YGR198W); ancestral locus Anc_5.142, uniprot|Q96V32 Yarrowia lipolytica Rhf1 required for filamentation
YALI1_A22093g	Compare to YALI0A21098g, similar to Saccharomyces cerevisiae MOG1 (YJR074W); ancestral locus Anc_1.529, similar to uniprot|P47123 Saccharomyces cerevisiae YJR074w MOG1 GSP1-interacting protein
YALI1_A22105g	Compare to YALI0A21120g, no similarity
YALI1_A22111g	Compare to YALI0A21131g, weakly similar to uniprot|Q08912 Saccharomyces cerevisiae Chromosome XV reading frame ORF YOR389W
YALI1_A22129g	Compare to YALI0A21153g, similar to Saccharomyces cerevisiae PNC1 (YGL037C); ancestral locus Anc_4.75, similar to uniprot|P53184 Saccharomyces cerevisiae YGL037c PNC1 Related to pyrazinamidase/nicotinamidase
YALI1_A22137g	Compare to YALI0A21175g, no similarity
YALI1_A22157g	Compare to YALI0A21197g, similar to Saccharomyces cerevisiae ENP2 (YGR145W); ancestral locus Anc_4.77, similar to uniprot|P48234 Saccharomyces cerevisiae YGR145w
YALI1_A22192g	Compare to YALI0A21241g, some similarities with DEHA-IPF3316.1 Debaryomyces hansenii DEHA0C17842g
YALI1_A22228g	Compare to YALI0A21263g, similar to uniprot|P54783 Saccharomyces cerevisiae YML086c ALO D-arabinono-1 4-lactone oxidase, similar to Saccharomyces cerevisiae ALO1 (YML086C); ancestral locus Anc_8.861
YALI1_A22236g	Compare to YALI0A21285g, no similarity
YALI1_A22275g	Compare to YALI0A21307g, similar to Saccharomyces cerevisiae PHO84 (YML123C); ancestral locus Anc_8.858, similar to uniprot|P25297 Saccharomyces cerevisiae YML123c PHO84 high-affinity inorganic phosphate/H+ symporter
YALI1_A22330g	Converted to coding from non-coding YALI0A21330g, weakly similar to CAGL0L02475g Candida glabrata, similar to Saccharomyces cerevisiae GCN4 (YEL009C); ancestral locus Anc_7.131
YALI1_A22369g	Compare to YALI0A21351g, no similarity
YALI1_A22393g	Compare to YALI0A21373g, no similarity
YALI1_A22415g	Compare to YALI0A21395g, no similarity
YALI1_A22440g	Compare to YALI0A21417g, similar to uniprot|O74267 Ashbya gossypii Threonine aldolase
YALI1_A22454g	Compare to YALI0A21439g, similar to wi|NCU09800.1 Neurospora crassa NCU09800. 1 putative dioxygenase
YALI1_A22496g	Compare to YALI0A21461g, similar to Saccharomyces cerevisiae IML2 (YJL082W) and YKR018C; ancestral locus Anc_1.285, similar to uniprot|P36114 Saccharomyces cerevisiae YKR018c
YALI1_A22539g	Heat shock protein
YALI1_B00049g	Compare to YALI0B00110g, some similarities with uniprot|P40072 Saccharomyces cerevisiae YER116c subunit of the HEX3P-SLX8P complex required for cell growth in the absence of SGS1 or TOP3, similar to Saccharomyces cerevisiae SLX8 (YER116C); ancestral locus Anc_7.416
YALI1_B00082g	Compare to YALI0B00132g, weakly similar to uniprot|P22929 Saccharomycopsis fibuligera Acid protease precursor (EC 3.4.23.-)
YALI1_B00133g	Compare to YALI0B00154g, no similarity
YALI1_B00198g	Compare to YALI0B00198g, similar to uniprot|Q02932 Saccharomyces cerevisiae YPL125w KAP120 nuclear transport factor member of karyopherin-beta family, similar to Saccharomyces cerevisiae KAP120 (YPL125W); ancestral locus Anc_8.624
YALI1_B00214g	Compare to YALI0B00220g, similar to uniprot|P39683 Saccharomyces cerevisiae YOR209C Probable nicotinate phosphoribosyltransferase (EC 2.4.2.11), similar to Saccharomyces cerevisiae NPT1 (YOR209C); ancestral locus Anc_8.625
YALI1_B00242g	Compare to YALI0B00264g, similar to Saccharomyces cerevisiae NFU1 (YKL040C); ancestral locus Anc_2.553, similar to uniprot|P32860 Saccharomyces cerevisiae YKL040c NFU1 iron homeostasis
YALI1_B00273g	Compare to YALI0B00286g, similar to Saccharomyces cerevisiae YER140W; ancestral locus Anc_8.182, weakly similar to uniprot|P40085 Saccharomyces cerevisiae YER140w
YALI1_B00280g	Compare to YALI0B00308g, similar to Saccharomyces cerevisiae YDR066C and YER139C; ancestral locus Anc_8.181, weakly similar to uniprot|P40084 Saccharomyces cerevisiae YER139c
YALI1_B00329g	Compare to YALI0B00374g, weakly similar to uniprot|P22929 Saccharomycopsis fibuligera Acid protease precursor (EC 3.4.23.-)
YALI1_B00357g	Compare to YALI0B00396g, similar to uniprot|Q96WT5 Aspergillus oryzae Maltose permease
YALI1_B00419g	Compare to YALI0B00418g, no similarity
YALI1_B00429g	Compare to YALI0B00440g, no similarity
YALI1_B00448g	Compare to YALI0B00462g, similar to uniprot|Q9UHK6 Homo sapiens Alpha- methylacyl- CoA racemase (EC 5.1.99.4) (2-methylacyl-CoA racemase)
YALI1_B00525g	Compare to YALI0B00528g, similar to Saccharomyces cerevisiae TFC4 (YGR047C); ancestral locus Anc_1.88, similar to uniprot|P33339 Saccharomyces cerevisiae YGR047C Transcription factor tau 131 kDa subunit (TFIIIC 131 kDa subunit)
YALI1_B00539g	Compare to YALI0B00550g, weakly similar to DEHA0C09053g Debaryomyces hansenii IPF 1884.1
YALI1_B00578g	Compare to YALI0B00572g, similar to uniprot|P53128 Saccharomyces cerevisiae YGL125W Methylenetetrahydrofolate reductase 2
YALI1_B00611g	Compare to YALI0B00594g, some similarities with uniprot|P47029 Saccharomyces cerevisiae YJL084C Uncharacterized protein
YALI1_B00675g	Compare to YALI0B00616g, similar to uniprot|P31209 Schizosaccharomyces pombe Polyadenylate-binding protein (Poly(A)-binding protein) (PABP)
YALI1_B00829g	Truncated form of YALI0B00814g, some similarities with wi|NCU02644.1 Neurospora crassa NCU02644.1 predicted protein
YALI1_B00908g	Compare to YALI0B00792g, uniprot|Q6CG53 Yarrowia lipolytica YALI0B00792g NADH- ubiquinone reductase accessory subunit 18.5 kDa (complex I)
YALI1_B00977g	Compare to YALI0B00770g, weakly similar to uniprot|Q3E756 Saccharomyces cerevisiae YBL029C-A predicted protein, similar to Saccharomyces cerevisiae YBL029C-A; ancestral locus Anc_3.315
YALI1_B01030g	Compare to YALI0B00748g, no similarity
YALI1_B01084g	Compare to YALI0B00726g, highly similar to uniprot|P38791 Saccharomyces cerevisiae YHR068w DYS1 Deoxyhypusine synthase (EC 2.5.1. 46) (DHS), similar to Saccharomyces cerevisiae DYS1 (YHR068W); ancestral locus Anc_5.343
YALI1_B01136g	Truncated form of YALI0B00704g, highly similar to uniprot|P07170 Saccharomyces cerevisiae YDR226W Adenylate kinase cytosolic (EC 2.7.4.3) (ATP-AMP transphosphorylase), similar to Saccharomyces cerevisiae ADK1 (YDR226W); ancestral locus Anc_8.441
YALI1_B01223g	Compare to YALI0B00682g, no similarity
YALI1_B01317g	Compare to YALI0B00660g, weakly similar to uniprot|Q12151 Saccharomyces cerevisiae YDR213w UPC2 regulatory protein involved in control of sterol uptake
YALI1_B01325g	Truncated form of YALI0B00638g, similar to uniprot|Q9USH6 Schizosaccharomyces pombe Hypothetical 24.6 kDa protein
YALI1_B01428g	Compare to YALI0B00836g, highly similar to uniprot|Q12265 Saccharomyces cerevisiae YOL061w PRS5 ribose-phosphate pyrophosphokinases
YALI1_B01464g	Compare to YALI0B00858g, weakly similar to uniprot|Q03973 Saccharomyces cerevisiae YDR174w HMO1 Non-histone protein
YALI1_B01511g	Compare to YALI0B00880g, similar to uniprot|P22211 Saccharomyces cerevisiae YNL183c NPR1 ser/thr protein kinase
YALI1_B01552g	Compare to YALI0B00902g, similar to uniprot|Q00664 Emericella nidulans Nuclear migration protein nudF
YALI1_B01578g	Compare to YALI0B00924g, no similarity
YALI1_B01628g	Compare to YALI0B00946g, highly similar to uniprot|Q12499 Saccharomyces cerevisiae YOR310C Nucleolar protein NOP58 (Nucleolar protein NOP5)
YALI1_B01644g	Compare to YALI0B00968g, similar to uniprot|O13701 Schizosaccharomyces pombe Transcription initiation factor TFIID 55 kDa subunit (TAFII-55), similar to Saccharomyces cerevisiae TAF7 (YMR227C); ancestral locus Anc_8.754
YALI1_B01698g	Compare to YALI0B00990g, highly similar to uniprot|Q02892 Saccharomyces cerevisiae YPL093W Nucleolar GTP-binding protein 1
YALI1_B01711g	Compare to YALI0B01012g, no similarity
YALI1_B01752g	Compare to YALI0B01034g, similar to Saccharomyces cerevisiae SUI2 (YJR007W); ancestral locus Anc_5.157, highly similar to uniprot|P56286 Schizosaccharomyces pombe Eukaryotic translation initiation factor 2 alpha subunit (eIF-2- alpha)
YALI1_B01813g	Compare to YALI0B01056g, similar to Saccharomyces cerevisiae YPR097W; ancestral locus Anc_3.408, weakly similar to weakly similar to uniprot|Q06839 Saccharomyces cerevisiae YPR097w
YALI1_B01839g	Compare to YALI0B01078g, similar to uniprot|P25635 Saccharomyces cerevisiae YCR057C Periodic tryptophan protein 2
YALI1_B01878g	Truncated form of YALI0B01100g, no similarity
YALI1_B01903g	Compare to YALI0B01144g, similar to Saccharomyces cerevisiae YLR281C; ancestral locus Anc_6.76, weakly similar to uniprot|Q05863 Saccharomyces cerevisiae YLR281c related to polypeptide chain release factors
YALI1_B01962g	Compare to YALI0B01166g, similar to Saccharomyces cerevisiae COS111 (YBR203W); ancestral locus Anc_8.526, weakly similar to uniprot|P38308 Saccharomyces cerevisiae YBR203w
YALI1_B02011g	Compare to YALI0B01188g, no similarity
YALI1_B02047g	Compare to YALI0B01210g, no similarity
YALI1_B02091g	Compare to YALI0B01224g, similar to Saccharomyces cerevisiae SPT6 (YGR116W); ancestral locus Anc_3.460, similar to uniprot|P23615 Saccharomyces cerevisiae YGR116w SPT6 transcription elongation protein singleton
YALI1_B02149g	Compare to YALI0B01254g, some similarities with uniprot|Q740M4 Mycobacterium paratuberculosis Dephospho-CoA kinase (Dephosphocoenzyme A kinase)
YALI1_B02177g	Compare to YALI0B01276g, weakly similar to uniprot|P53294 Saccharomyces cerevisiae YGR169c similarity to RIB2P
YALI1_B02194g	Compare to YALI0B01298g, similar to uniprot|Q04458 Saccharomyces cerevisiae YMR110c Related to aldehyde dehydrogenase
YALI1_B02228g	Compare to YALI0B01320g, weakly similar to to DEHA-IPF9278.1 Debaryomyces hansenii DEHA0B02046g
YALI1_B02283g	Compare to YALI0B01342g, similar to uniprot|P49374 Kluyveromyces lactis High- affinity glucose transporter
YALI1_B02345g	Compare to YALI0B01364g, uniprot|Q9P3Y5 Yarrowia lipolytica 3- isopropylmalate dehydratase, similar to Saccharomyces cerevisiae LEU1 (YGL009C); ancestral locus Anc_4.107
YALI1_B02375g	Compare to YALI0B01386g, similar to uniprot|P32795 Saccharomyces cerevisiae YPR024W YME1 protease of the SEC18/CDC48/PAS1 family of ATPases (AAA)
YALI1_B02415g	Compare to YALI0B01408g, similar to uniprot|P30574 Candida albicans Carboxypeptidase Y precursor (EC 3.4.16.5) (Carboxypeptidase YSCY)
YALI1_B02430g	Compare to YALI0B01430g, no similarity
YALI1_B02465g	Compare to YALI0B01452g, similar to Saccharomyces cerevisiae ORC5 (YNL261W); ancestral locus Anc_1.95, similar to CA2749|IPF11465 Candida albicans IPF11465 unknown function
YALI1_B02472g	Compare to YALI0B01474g, similar to uniprot|P28519 Saccharomyces cerevisiae YMR201c RAD14 nucleotide excision repair protein, similar to Saccharomyces cerevisiae RAD14 (YMR201C); ancestral locus Anc_6.296
YALI1_B02487g	Compare to YALI0B01540g, similar to uniprot|P22289 Saccharomyces cerevisiae YGR183c QCR9 ubiquinol--cytochrome-c reductase subunit 9, similar to Saccharomyces cerevisiae QCR9 (YGR183C); ancestral locus Anc_5.189
YALI1_B02496g	Compare to YALI0B01562g, no similarity
YALI1_B02506g	Compare to YALI0B01584g, some similarities with uniprot|Q9HE07 Schizosaccharomyces pombe conserved hypothetical protein
YALI1_B02533g	Compare to YALI0B01606g, similar to Saccharomyces cerevisiae SWF1 (YDR126W); ancestral locus Anc_8.286, weakly similar to uniprot|Q04629 Saccharomyces cerevisiae YDR126w
YALI1_B02550g	Compare to YALI0B01628g, similar to Saccharomyces cerevisiae MDR1 (YGR100W); ancestral locus Anc_3.444, similar to uniprot|P53258 Saccharomyces cerevisiae YGR100w MIC1 MAC1P interacting protein
YALI1_B02604g	Compare to YALI0B01650g, some similarities with uniprot|Q12305 Saccharomyces cerevisiae YOR285w OR uniprot|Q08742 Saccharomyces cerevisiae YOR286w related to D. melanogaster heat shock protein
YALI1_B02637g	Compare to YALI0B01672g, similar to uniprot|Q8J0Q1 Candida albicans Alpha-1- 2- mannosyltransferase and uniprot|P26725 Saccharomyces cerevisiae YJL139c YUR1 mannosyltransferase P9.2.f9.1
YALI1_B02642g	Compare to YALI0B01694g, similar to Saccharomyces cerevisiae YLR253W; ancestral locus Anc_1.383, similar to uniprot|Q06567 Saccharomyces cerevisiae YLR253W Hypothetical 65.9 kDa protein in SSP120-HAP1 intergenic region
YALI1_B02672g	Compare to YALI0B01716g, similar to uniprot|Q848P2 uncultured bacterium Putative acetyltransferase
YALI1_B02696g	Compare to YALI0B01738g, similar to Saccharomyces cerevisiae RTN2 (YDL204W) and RTN1 (YDR233C); ancestral locus Anc_8.454, weakly similar to uniprot|Q04947 Saccharomyces cerevisiae YDR233c RTN1 Reticulon-like protein 1
YALI1_B02717g	Compare to YALI0B01760g, similar to uniprot|P46672 Saccharomyces cerevisiae YGL105w G4P1 protein with specific affinity for G4 quadruplex nucleic acids
YALI1_B02733g	Compare to YALI0B01771g, gnl|GLV|YALI0B01771g [Yarrowia lipolytica] similar to uniprot|Q08108 Saccharomyces cerevisiae YOL011w PLB3_YEAST Lysophospholipase 3 precursor
YALI1_B02767g	Compare to YALI0B01782g, similar to uniprot|Q96VT2 Aspergillus niger prolyl aminopeptidase A (EC 3.4.11.5)
YALI1_B02781g	Compare to YALI0B01804g, weakly similar to uniprot|P47153 Saccharomyces cerevisiae YJR116W Hypothetical 32.0 kDa protein in NNF1- STE24 intergenic region
YALI1_B02806g	Compare to YALI0B01826g, similar to Saccharomyces cerevisiae FMN1 (YDR236C); ancestral locus Anc_8.459, weakly similar to uniprot|Q03778 Saccharomyces cerevisiae YDR236C Hypothetical 24.5 kDa protein
YALI1_B02833g	Compare to YALI0B01848g, uniprot|O74132 Yarrowia lipolytica ALK6 CYP52 family member
YALI1_B02874g	Compare to YALI0B01870g, weakly similar to uniprot|Q12315 Saccharomyces cerevisiae YDL207w RNA export factor GLE1, similar to Saccharomyces cerevisiae GLE1 (YDL207W); ancestral locus Anc_8.460
YALI1_B02881g	Compare to YALI0B01892g, similar to uniprot|P36519 Saccharomyces cerevisiae YDR237W 60S ribosomal protein L7 mitochondrial precursor (YmL7), similar to Saccharomyces cerevisiae MRPL7 (YDR237W); ancestral locus Anc_8.461
YALI1_B02910g	Compare to YALI0B01914g, similar to uniprot|P39709 Saccharomyces cerevisiae YAL067C probable transporter SEO1
YALI1_B02931g	Compare to YALI0B01980g, similar to Saccharomyces cerevisiae MTF1 (YMR228W); ancestral locus Anc_8.755, some similarities with uniprot|P87250 Kluyveromyces lactis mitochondrial replication protein MTF1
YALI1_B02991g	Compare to YALI0B02002g, no similarity
YALI1_B03021g	Compare to YALI0B02024g, similar to uniprot|Q9UST8 Schizosaccharomyces pombe ribonuclease H (EC 3.1.26.4)
YALI1_B03041g	Compare to YALI0B02046g, similar to uniprot|O74517 Schizosaccharomyces pombe Hypothetical protein
YALI1_B03043g	Compare to YALI0B02068g, similar to uniprot|P38304 Saccharomyces cerevisiae YBR193C Hypothetical 25.3 kDa protein in RIM2-MSI1 intergenic region, similar to Saccharomyces cerevisiae MED8 (YBR193C); ancestral locus Anc_8.551
YALI1_B03085g	Compare to YALI0B02090g, similar to uniprot|Q06593 Saccharomyces cerevisiae YPR194c OPT2
YALI1_B03120g	Compare to YALI0B02112g, no similarity
YALI1_B03168g	Compare to YALI0B02156g, no similarity
YALI1_B03198g	Compare to YALI0B02178g, similar to uniprot|P23542 Saccharomyces cerevisiae YLR027c AAT2 aspartate aminotransferase
YALI1_B03225g	Compare to YALI0B02200g, no similarity
YALI1_B03314g	Compare to YALI0B02222g, similar to Saccharomyces cerevisiae YAH1 (YPL252C); ancestral locus Anc_6.288, similar to uniprot|Q12184 Saccharomyces cerevisiae YPL252c Adrenodoxin homolog mitochondrial precursor (Mitochondrial ferredoxin)
YALI1_B03335g	Compare to YALI0B02244g, similar to uniprot|Q04338 Saccharomyces cerevisiae YMR197C Vesicle transport v-SNARE protein VTI1, similar to Saccharomyces cerevisiae VTI1 (YMR197C); ancestral locus Anc_6.287
YALI1_B03404g	Compare to YALI0B02266g, some similarities with uniprot|Q8WZS4 Neurospora crassa hypothetical 138.9 kDa protein
YALI1_B03610g	Compare to YALI0B02310g, no similarity
YALI1_B03644g	Compare to YALI0B02332g, similar to uniprot|Q9P6E3 Neurospora crassa conserved hypothetical protein, similar to Saccharomyces cerevisiae YMR196W; ancestral locus Anc_6.286
YALI1_B03719g	Compare to YALI0B02376g, similar to Saccharomyces cerevisiae PIK1 (YNL267W); ancestral locus Anc_1.85, similar to uniprot|P39104 Saccharomyces cerevisiae YNL267w PIK1 phosphatidylinositol 4-kinase
YALI1_B03761g	Compare to YALI0B02398g, similar to uniprot|Q06593 Saccharomyces cerevisiae YPR194c OPT2
YALI1_B03797g	Compare to YALI0B02409g, gnl|GLV|YALI0B02409g [Yarrowia lipolytica] no similarity
YALI1_B03807g	Compare to YALI0B02420g, weakly similar to uniprot|P36156 Saccharomyces cerevisiae YKR076w ECM4 involved in cell wall biogenesis and architecture
YALI1_B03832g	Compare to YALI0B02442g, some similarities with uniprot|P08965 Schizosaccharomyces pombe Meiosis protein mei2
YALI1_B03853g	Compare to YALI0B02464g, no similarity
YALI1_B03910g	Compare to YALI0B02544g, similar to uniprot|Q04182 Saccharomyces cerevisiae YDR406w PDR15 ATP-binding cassette transporter family member, similar to Saccharomyces cerevisiae PDR5 (YOR153W) and PDR15 (YDR406W); ancestral locus Anc_5.500
YALI1_B03963g	Compare to YALI0B02552g, weakly similar to wi|NCU01254.1 Neurospora crassa NCU01254.1 hypothetical protein, similar to Saccharomyces cerevisiae ZRG17 (YNR039C); ancestral locus Anc_6.357
YALI1_B03979g	Compare to YALI0B02574g, similar to uniprot|P39925 Saccharomyces cerevisiae YER017C Mitochondrial respiratory chain complexes assembly protein AFG3 (EC 3.4.24.-) (TAT-binding homolog 10)
YALI1_B04007g	Compare to YALI0B02596g, no similarity
YALI1_B04032g	Compare to YALI0B02662g, no similarity
YALI1_B04068g	Compare to YALI0B02684g, similar to uniprot|Q9UVL6 Candida albicans Copper resistance-associated P-type ATPase
YALI1_B04123g	Compare to YALI0B02706g, similar to Saccharomyces cerevisiae NUP1 (YOR098C); ancestral locus Anc_2.186, similar to uniprot|Q10168 Schizosaccharomyces pombe hypothetical protein C26A3.15c and uniprot|P14907 Saccharomyces cerevisiae YJL041W Nucleoporin NSP1
YALI1_B04138g	Compare to YALI0B02728g, similar to Saccharomyces cerevisiae GPM1 (YKL152C); ancestral locus Anc_5.257, highly similar to uniprot|P00950 Saccharomyces cerevisiae YKL152C Phosphoglycerate mutase 1 (EC 5.4.2.1) (Phosphoglyceromutase 1) (PGAM 1) (MPGM 1) (BPG-dependent PGAM 1)
YALI1_B04200g	Compare to YALI0B02750g, similar to Saccharomyces cerevisiae NUP192 (YJL039C); ancestral locus Anc_5.261, similar to uniprot|P47054 Saccharomyces cerevisiae YJL039c NUP192 nucleoporin localize at the inner site of the nuclear membrane
YALI1_B04212g	Compare to YALI0B02772g, similar to uniprot|P40454 Saccharomyces cerevisiae YIL153W Hypothetical 45.1 kDa protein
YALI1_B04228g	Compare to YALI0B02794g, similar to uniprot|P25381 Saccharomyces cerevisiae YCR045C Related to subtilase-type proteinase
YALI1_B04248g	Compare to YALI0B02816g, similar to uniprot|Q00772 Saccharomyces cerevisiae YHR030C Mitogen-activated protein kinase SLT2/MPK1 (EC 2.7. 1.-) (MAP kinase MPK1)
YALI1_B04274g	Compare to YALI0B02838g, similar to uniprot|Q96VT7 Aspergillus niger Dipeptidyl aminopeptidase type IV (EC 3.4.14.5)
YALI1_B04309g	Compare to YALI0B02852g, similar to uniprot|P47096 Saccharomyces cerevisiae YJR025C 3-hydroxyanthranilate 3 4-dioxygenase (EC 1.13.11. 6), similar to Saccharomyces cerevisiae BNA1 (YJR025C); ancestral locus Anc_5.128
YALI1_B04321g	Compare to YALI0B02860g, similar to uniprot|P38764 Saccharomyces cerevisiae YHR027C 26S proteasome regulatory subunit RPN1 (Proteasome non-ATPase subunit 1), similar to Saccharomyces cerevisiae RPN1 (YHR027C); ancestral locus Anc_5.271
YALI1_B04370g	Compare to YALI0B02882g, weakly similar to uniprot|Q9C2A6 Neurospora crassa Hypothetical 72.8 kDa protein,ancestral locus Anc_2.556
YALI1_B04391g	Converted to coding from non-coding YALI0B02904g, similar to uniprot|Q04301 Saccharomyces cerevisiae YMR088c related to multidrug resistance proteins
YALI1_B04433g	Compare to YALI0B02948g, similar to Saccharomyces cerevisiae GPD1 (YDL022W) and GPD2 (YOL059W); ancestral locus Anc_3.169, uniprot|Q9UVF4 Yarrowia lipolytica Glycerol-3- phosphate dehydrogenase [NAD ]
YALI1_B04466g	Truncated form of YALI0B02970g, weakly similar to uniprot|P53251 Saccharomyces cerevisiae YGR081c, similar to Saccharomyces cerevisiae SLX9 (YGR081C); ancestral locus Anc_3.409
YALI1_B04470g	Compare to YALI0B02992g, similar to uniprot|P36147 Saccharomyces cerevisiae YKR065c Hypothetical 22.0 kDa protein, similar to Saccharomyces cerevisiae PAM17 (YKR065C); ancestral locus Anc_1.196
YALI1_B04497g	Compare to YALI0B03014g, similar to uniprot|Q9UUK1 Schizosaccharomyces pombe Conserved hypothetical protein
YALI1_B04502g	Compare to YALI0B03036g, similar to Saccharomyces cerevisiae SYF2 (YGR129W); ancestral locus Anc_3.490, weakly similar to uniprot|O59733 Schizosaccharomyces pombe Hypothetical 28.0 kDa protein
YALI1_B04523g	Compare to YALI0B03058g, no similarity
YALI1_B04540g	Compare to YALI0B03080g, similar to DEHA0C01067g Debaryomyces hansenii IPF 2503.1
YALI1_B04559g	Compare to YALI0B03102g, no similarity
YALI1_B04589g	Compare to YALI0B03124g, similar to uniprot|Q8NKC1 Schizosaccharomyces pombe Putative O-methyltransferase possibly involved in homocysteine metabolism
YALI1_B04637g	Compare to YALI0B03146g, weakly similar to uniprot|Q07807 Saccharomyces cerevisiae YLL013c transcript-specific regulator of mRNA degradation
YALI1_B04747g	Compare to YALI0B03190g, similar to uniprot|Q873D6 Neurospora crassa B17B1. 060 Related to a retinal short-chain dehydrogenase
YALI1_B04753g	Compare to YALI0B03212g, weakly similar to CA1730|IPF8439 Candida albicans hypothetical protein
YALI1_B04759g	Compare to YALI0B03234g, no similarity
YALI1_B04779g	Compare to YALI0B03278g, some similarities with uniprot|Q12035 Saccharomyces cerevisiae YLR051c, similar to Saccharomyces cerevisiae FCF2 (YLR051C); ancestral locus Anc_8.54
YALI1_B04781g	Compare to YALI0B03300g, weakly similar to uniprot|Q06436 Saccharomyces cerevisiae YLR427w weak similarity to human transcription regulator Staf-5
YALI1_B04803g	Compare to YALI0B03322g, weakly similar to uniprot|Q02516 Saccharomyces cerevisiae YOR358w HAP5 CCAAT-binding factor subunit
YALI1_B04831g	Compare to YALI0B03344g, similar to uniprot|Q06143 Saccharomyces cerevisiae YLR348C Mitochondrial dicarboxylate transporter (Dicarboxylate carrier 1), similar to Saccharomyces cerevisiae DIC1 (YLR348C); ancestral locus Anc_1.123
YALI1_B04853g	Compare to YALI0B03366g, similar to uniprot|P14306 Saccharomyces cerevisiae YLR178C Carboxypeptidase Y inhibitor (CPY inhibitor) (Ic) (I(C)) (Protein DKA1) (Protein NSP1) (Protein TFS1)
YALI1_B04873g	Compare to YALI0B03388g, weakly similar to uniprot|Q9UTR9 Schizosaccharomyces pombe WD-repeat protein, similar to Saccharomyces cerevisiae YPR085C; ancestral locus Anc_3.391
YALI1_B04901g	Compare to YALI0B03410g, similar to Saccharomyces cerevisiae SHE3 (YBR130C); ancestral locus Anc_3.393, some similarities with uniprot|Q8IDX6 Plasmodium falciparum Reticulocyte binding protein 2
YALI1_B04937g	Compare to YALI0B03476g, similar to uniprot|Q9Y7R3 Schizosaccharomyces pombe Condensin complex subunit 2 (p105)
YALI1_B04950g	Compare to YALI0B03498g, similar to Saccharomyces cerevisiae IME4 (YGL192W); ancestral locus Anc_8.152, weakly similar to uniprot|P41833 Saccharomyces cerevisiae YGL192w IME4 positive transcription factor for IME2
YALI1_B04974g	Compare to YALI0B03520g, similar to Saccharomyces cerevisiae CUL3 (YGR003W); ancestral locus Anc_4.138, similar to uniprot|Q09760 Schizosaccharomyces pombe Cullin 3 homolog (Cul-3)
YALI1_B05005g	Compare to YALI0B03542g, no similarity
YALI1_B05024g	Compare to YALI0B03564g, similar to Saccharomyces cerevisiae BGL2 (YGR282C); ancestral locus Anc_5.8, similar to uniprot|P43070 Candida albicans Glucan 1 3- beta -glucosidase precursor (EC 3.2.1.58) (Exo-1 3-beta- glucanase)
YALI1_B05043g	Compare to YALI0B03575g, gnl|GLV|YALI0B03575g [Yarrowia lipolytica] weakly similar to uniprot|P21734 Saccharomyces cerevisiae YDR177W UBC1_YEAST Ubiquitin-conjugating enzyme (Ubiquitin- protein ligase)
YALI1_B05072g	Compare to YALI0B03630g, highly similar to uniprot|Q9HEW8 Emericella nidulans Ribonucleotide reductase
YALI1_B05106g	Compare to YALI0B03652g, similar to Saccharomyces cerevisiae ROT1 (YMR200W); ancestral locus Anc_6.294, similar to uniprot|Q03691 Saccharomyces cerevisiae YMR200w ROT2 mutant suppresses TOR2 mutation
YALI1_B05185g	Truncated form of YALI0B03718g, weakly similar to uniprot|O60152 Schizosaccharomyces pombe N-end-recognizing protein (Ubiquitin-protein ligase E3 component)
YALI1_B05226g	Compare to YALI0B03762g, weakly similar to uniprot|P53169 Saccharomyces cerevisiae YGL060w, similar to Saccharomyces cerevisiae YBP1 (YBR216C) and YBP2 (YGL060W); ancestral locus Anc_6.112
YALI1_B05242g	Compare to YALI0B03784g, similar to Saccharomyces cerevisiae YOR287C; ancestral locus Anc_8.748, similar to uniprot|Q9HEC4 Neurospora crassa Conserved hypothetical protein
YALI1_B05282g	Compare to YALI0B03850g, no similarity
YALI1_B05295g	Compare to YALI0B03916g, similar to uniprot|P40029 Saccharomyces cerevisiae YER042w MXR1 Peptide methionine sulfoxide reductase (EC 1. 8.4.6) (Protein-methionine-S-oxide reductase) (Peptide Met(O) reductase)
YALI1_B05313g	Compare to YALI0B03938g, no similarity
YALI1_B05350g	Compare to YALI0B03960g, similar to uniprot|Q9Y7U7 Schizosaccharomyces pombe Putative transcription factor
YALI1_B05364g	Compare to YALI0B03982g, highly similar to uniprot|P00830 Saccharomyces cerevisiae YJR121W ATP synthase beta chain mitochondrial precursor (EC 3.6.3.14), similar to Saccharomyces cerevisiae ATP2 (YJR121W); ancestral locus Anc_7.507
YALI1_B05404g	Compare to YALI0B04004g, similar to uniprot|Q08777 Saccharomyces cerevisiae Chromosome XV reading frame ORF YOR306C
YALI1_B05420g	Compare to YALI0B04026g, similar to Saccharomyces cerevisiae NYV1 (YLR093C); ancestral locus Anc_8.276, some similarities with uniprot|Q12255 Saccharomyces cerevisiae YLR093c NYV1 v-SNARE vacuolar synaptobrevin
YALI1_B05438g	Compare to YALI0B04048g, similar to Saccharomyces cerevisiae IST1 (YNL265C); ancestral locus Anc_1.87, similar to uniprot|P53843 Saccharomyces cerevisiae YNL265C Hypothetical 34.5 kDa protein in PIK1-POL2 intergenic region
YALI1_B05454g	Compare to YALI0B04070g, weakly similar to uniprot|P40343 Saccharomyces cerevisiae YNR006w VPS27 vacuolar protein sorting- associated protein
YALI1_B05483g	Compare to YALI0B04092g, similar to uniprot|Q03219 Saccharomyces cerevisiae YMR178W Hypothetical 31.1 kDa protein in SIP18-SPT21 intergenic region, similar to Saccharomyces cerevisiae YMR178W; ancestral locus Anc_6.250
YALI1_B05497g	Compare to YALI0B04114g, similar to uniprot|Q08971 Saccharomyces cerevisiae Chromosome XVI reading frame ORF YPL225W, similar to Saccharomyces cerevisiae YPL225W; ancestral locus Anc_6.249
YALI1_B05520g	Compare to YALI0B04136g, similar to uniprot|P53743 Saccharomyces cerevisiae YNR054C Hypothetical 36.4 kDa protein in POP2-HOL1 intergenic region, similar to Saccharomyces cerevisiae ESF2 (YNR054C); ancestral locus Anc_6.381
YALI1_B05522g	Compare to YALI0B04158g, similar to uniprot|P38323 Saccharomyces cerevisiae YBR227C Mitochondrial clpX-like chaperone MCX1, similar to Saccharomyces cerevisiae MCX1 (YBR227C); ancestral locus Anc_6.124
YALI1_B05571g	Compare to YALI0B04180g, similar to Saccharomyces cerevisiae ALA1 (YOR335C); ancestral locus Anc_7.58, similar to uniprot|P40825 Saccharomyces cerevisiae YOR335C Alanyl-tRNA synthetase cytoplasmic (EC 6.1.1.7) (Alanine--tRNA ligase)
YALI1_B05609g	Compare to YALI0B04202g, similar to uniprot|P33413 Saccharomyces cerevisiae YHL016c DUR3 urea transport protein
YALI1_B05646g	Compare to YALI0B04224g, similar to Saccharomyces cerevisiae RPL42B (YHR141C) and RPL42A (YNL162W); ancestral locus Anc_2.95, highly similar to uniprot|P02405 Saccharomyces cerevisiae YNL162w RPL42A and highly similar to uniprot|P02405 Saccharomyces cerevisiae YHR141C RPL42B Ribosomal Protein of the Large subunit
YALI1_B05690g	Compare to YALI0B04246g, highly similar to uniprot|Q00381 Saccharomyces cerevisiae YJR058c APS2 AP-2 complex subunit sigma2 subunit
YALI1_B05711g	Compare to YALI0B04268g, similar to Saccharomyces cerevisiae CBK1 (YNL161W); ancestral locus Anc_2.96, similar to uniprot|P53894 Saccharomyces cerevisiae YNL161W Serine/threonine-protein kinase CBK1 (EC 2.7.1.-) (Cell wall biosynthesis kinase)
YALI1_B05762g	Compare to YALI0B04290g, similar to Saccharomyces cerevisiae PPS1 (YBR276C); ancestral locus Anc_1.312, weakly similar to uniprot|P38148 Saccharomyces cerevisiae YBR276c PPS1 protein tyrosine phosphatase
YALI1_B05798g	Compare to YALI0B04312g, similar to Saccharomyces cerevisiae INO1 (YJL153C); ancestral locus Anc_1.195, similar to uniprot|O74247 Pichia pastoris and to uniprot|P11986 Saccharomyces cerevisiae YJL153c INO1 myo- inositol-1-phosphate synthase
YALI1_B05832g	Compare to YALI0B04334g, similar to uniprot|Q08972 Saccharomyces cerevisiae YPL226w NEW1 translation elongation factor eEF3-like
YALI1_B05891g	Compare to YALI0B04356g, similar to Saccharomyces cerevisiae YGR017W; ancestral locus Anc_4.154, weakly similar to uniprot|P53210 Saccharomyces cerevisiae YGR017W Hypothetical 34.7 kDa protein in MSB2- UGA1 intergenic region
YALI1_B05947g	Compare to YALI0B04378g, similar to Saccharomyces cerevisiae YBR235W; ancestral locus Anc_6.146, similar to uniprot|P38329 Saccharomyces cerevisiae YBR235W Hypothetical 124.0 kDa protein in PBP2-ABD1 intergenic region
YALI1_B05964g	Compare to YALI0B04400g, similar to uniprot|Q8J2P8 Gibberella moniliformis MPU1p
YALI1_B05971g	Compare to YALI0B04422g, similar to uniprot|P40533 Saccharomyces cerevisiae YIL039W Hypothetical 54.9 kDa protein in CBR5-NOT3 intergenic region, similar to Saccharomyces cerevisiae YIL039W; ancestral locus Anc_7.216
YALI1_B05995g	Compare to YALI0B04444g, similar to uniprot|P38264 Saccharomyces cerevisiae YBR106W Inorganic phosphate transporter PHO88, similar to Saccharomyces cerevisiae PHO88 (YBR106W); ancestral locus Anc_3.355
YALI1_B06015g	Compare to YALI0B04466g, weakly similar to DEHA0D10956g Debaryomyces hansenii IPF 1267.1, similar to Saccharomyces cerevisiae NSL1 (YPL233W); ancestral locus Anc_6.259
YALI1_B06028g	Compare to YALI0B04488g, similar to Saccharomyces cerevisiae IQG1 (YPL242C); ancestral locus Anc_6.269, weakly similar to uniprot|Q12280 Saccharomyces cerevisiae YPL242c IQG1 involved in cytokinesis has similarity to mammalian IQGAP proteins
YALI1_B06110g	Compare to YALI0B04510g, weakly similar to uniprot|P33417 Saccharomyces cerevisiae YKL032c IXR1 intrastrand crosslink recognition protein and transcription factor
YALI1_B06245g	Compare to YALI0B04532g, similar to Saccharomyces cerevisiae NAR1 (YNL240C); ancestral locus Anc_2.4, similar to uniprot|Q9Y7N7 Schizosaccharomyces pombe Hypothetical protein
YALI1_B06264g	Compare to YALI0B04554g, no similarity
YALI1_B06315g	Compare to YALI0B04598g, some similarities with uniprot|Q12527 Saccharomyces cerevisiae YPR049c related to USO1P, similar to Saccharomyces cerevisiae ATG11 (YPR049C); ancestral locus Anc_3.330
YALI1_B06324g	Compare to YALI0B04620g, weakly similar to uniprot|Q12513 Saccharomyces cerevisiae YDL110c
YALI1_B06340g	Compare to YALI0B04642g, similar to uniprot|Q06593 Saccharomyces cerevisiae YPR194c OPT2
YALI1_B06447g	Compare to YALI0B04708g, similar to Candida albicans |CA0182|CaIFI1 unknown function
YALI1_B06487g	Compare to YALI0B04752g, similar to uniprot|Q9UU90 Schizosaccharomyces pombe Putative pre-tRNA/pre-rRNA processing protein, similar to Saccharomyces cerevisiae POP5 (YAL033W); ancestral locus Anc_7.59
YALI1_B06489g	Compare to YALI0B04774g, weakly similar to uniprot|Q8R0W9 Mus musculus Hypothetical 38.2 kDa protein Fragment, similar to Saccharomyces cerevisiae TGS1 (YPL157W); ancestral locus Anc_8.680
YALI1_B06607g	Compare to YALI0B04796g, similar to Saccharomyces cerevisiae MTH1 (YDR277C) and STD1 (YOR047C); ancestral locus Anc_5.644, some similarities with uniprot|P35198 Saccharomyces cerevisiae YDR277c MTH1 protein
YALI1_B06704g	Compare to YALI0B04840g, similar to uniprot|Q12003 Saccharomyces cerevisiae YPL236c
YALI1_B06735g	Compare to YALI0B04851g, similar to Saccharomyces cerevisiae RPB10 (YOR210W); ancestral locus Anc_8.627,gnl|GLV|YALI0B04851g [Yarrowia lipolytica] similar to uniprot|P22139 Saccharomyces cerevisiae YOR210w RPBX_YEAST DNA-directed RNA polymerases I/II/III subunit 10 (8.3 kDa polypeptide) (ABC10- beta)
YALI1_B06745g	Compare to YALI0B04862g, similar to Saccharomyces cerevisiae NAN1 (YPL126W); ancestral locus Anc_8.626, weakly similar to uniprot|Q02931 Saccharomyces cerevisiae YPL126w NAN1 weak similarity to fruit fly TFIID subunit p85
YALI1_B06776g	Compare to YALI0B04884g, similar to uniprot|Q873I9 Neurospora crassa B9B11. 100 Related to pirin
YALI1_B06809g	Compare to YALI0B04906g, similar to uniprot|Q96UC6 Neurospora crassa Conserved hypothetical protein
YALI1_B06839g	Compare to YALI0B04928g, similar to Saccharomyces cerevisiae ISU2 (YOR226C) and ISU1 (YPL135W); ancestral locus Anc_8.647, similar to uniprot|Q03020 Saccharomyces cerevisiae YPL135w ISU1 strong similarity to nitrogen fixation protein
YALI1_B06847g	Compare to YALI0B04950g, similar to Saccharomyces cerevisiae YGR273C and YMR295C; ancestral locus Anc_5.29, weakly similar to uniprot|Q03559 Saccharomyces cerevisiae YMR295C Hypothetical 22.2 kDa protein in JNM1- LCB1 intergenic region
YALI1_B06866g	Compare to YALI0B04972g, no similarity, similar to Saccharomyces cerevisiae DSF2 (YBR007C); ancestral locus Anc_3.196, no similarity
YALI1_B06928g	Compare to YALI0B05038g, no similarity
YALI1_B07043g	Converted to coding from non-coding YALI0B05060g, similar to uniprot|Q12303 Saccharomyces cerevisiae YLR121c YPS3 GPI-anchored aspartyl protease 3 (yapsin 3) in frame stop codon
YALI1_B07076g	Compare to YALI0B05104g, similar uniprot|Q04033 Saccharomyces cerevisiae YDR415c
YALI1_B07094g	Compare to YALI0B05126g, similar to Saccharomyces cerevisiae ERG11 (YHR007C); ancestral locus Anc_5.588, similar to uniprot|P10614 Saccharomyces cerevisiae YHR007C Cytochrome P450 51 (EC 1.14.14.-) (CYPL1) (P450- L1A1) (Sterol 14- alpha demethylase)
YALI1_B07134g	Compare to YALI0B05148g, weakly similar to uniprot|P35724 Saccharomyces cerevisiae YKL064w MNR2 overexpression overcomes manganese toxicity
YALI1_B07162g	Compare to YALI0B05170g, weakly similar to uniprot|P09620 Saccharomyces cerevisiae YGL203c KEX1 carboxypeptidase (YSC-alpha)
YALI1_B07210g	Compare to YALI0B05214g, similar to uniprot|Q08743 Saccharomyces cerevisiae Chromosome XV reading frame ORF YOR292C, similar to Saccharomyces cerevisiae SYM1 (YLR251W); ancestral locus Anc_1.384
YALI1_B07220g	Compare to YALI0B05236g, no similarity
YALI1_B07271g	Compare to YALI0B05258g, similar to uniprot|P47161 Saccharomyces cerevisiae YJR126C Hypothetical 92.0 kDa protein in RPS5-ZMS1 intergenic region
YALI1_B07284g	Compare to YALI0B05280g, similar to uniprot|O74710 Emericella nidulans Hypothetical 30.8 kDa protein, similar to Saccharomyces cerevisiae YNL305C; ancestral locus Anc_3.44
YALI1_B07295g	Compare to YALI0B05302g, ancestral locus Anc_2.209, similar to uniprot|Q8J0J9 Parasitella parasitica Acyl- CoA thioester hydrolase (EC 3.1.2.1)
YALI1_B07331g	Compare to YALI0B05346g, similar to DEHA0E22990g Debaryomyces hansenii IPF 11107.1
YALI1_B07366g	Compare to YALI0B05368g, similar to Saccharomyces cerevisiae URA7 (YBL039C) and URA8 (YJR103W); ancestral locus Anc_7.476, highly similar to uniprot|P28274 Saccharomyces cerevisiae YBL039C CTP synthase 1 (EC 6.3.4.2) (UTP-- ammonia ligase 1)
YALI1_B07374g	Compare to YALI0B05390g, similar to uniprot|Q03441 Saccharomyces cerevisiae YDL001W Hypothetical protein
YALI1_B07399g	Compare to YALI0B05412g, weakly similar to uniprot|Q966L2 Caenorhabditis elegans Hypothetical protein E01A2.1
YALI1_B07413g	Compare to YALI0B05434g, no similarity
YALI1_B07444g	Compare to YALI0B05456g, weakly similar to uniprot|P38137 Saccharomyces cerevisiae YBR222c PCS60 AMP-binding protein peroxisomal
YALI1_B07500g	Compare to YALI0B05478g, some similarities with uniprot|Q05937 Saccharomyces cerevisiae YLR375w STP3 involved in pre-tRNA splicing and in uptake of branched-chain amino acids
YALI1_B07538g	Compare to YALI0B05500g, similar to uniprot|Q9USW6 Schizosaccharomyces pombe dolichol phosphate-mannose biosynthesis regulatory protein
YALI1_B07549g	Compare to YALI0B05522g, similar to uniprot|Q96TK5 Coccidioides immitis Aspartyl aminopeptidase, similar to Saccharomyces cerevisiae YHR113W; ancestral locus Anc_5.424
YALI1_B07578g	Compare to YALI0B05544g, no similarity
YALI1_B07598g	Compare to YALI0B05566g, some similarities with uniprot|Q12236 Saccharomyces cerevisiae YOL100w PKH2 related to ser/thr protein kinases P108.1.f16.1
YALI1_B07652g	Compare to YALI0B05610g, similar to Saccharomyces cerevisiae HSP10 (YOR020C); ancestral locus Anc_5.607, similar to uniprot|P38910 Saccharomyces cerevisiae YOR020C 10 kDa heat shock protein mitochondrial (HSP10) (10 kDa chaperonin
YALI1_B07675g	Compare to YALI0B05632g, similar to Saccharomyces cerevisiae PRP3 (YDR473C); ancestral locus Anc_5.608, weakly similar to uniprot|Q03338 Saccharomyces cerevisiae YDR473c PRP3 essential splicing factor
YALI1_B07696g	Compare to YALI0B05654g, similar to Saccharomyces cerevisiae YPS3 (YLR121C); ancestral locus Anc_8.319, uniprot|Q92389 Yarrowia lipolytica Acid extracellular protease precursor
YALI1_B07735g	Compare to YALI0B05676g, weakly similar to wi|NCU03885.1 Neurospora crassa NCU03885.1 predicted protein, similar to Saccharomyces cerevisiae AHC1 (YOR023C); ancestral locus Anc_5.603
YALI1_B07762g	Compare to YALI0B05698g, some similarities with uniprot|Q8WXX7 Homo sapiens AUTS2 Autism susceptibility gene 2 protein
YALI1_B07769g	Compare to YALI0B05720g, weakly similar to uniprot|Q03337 Saccharomyces cerevisiae YDR472w, similar to Saccharomyces cerevisiae TRS31 (YDR472W); ancestral locus Anc_5.601
YALI1_B07786g	Compare to YALI0B05742g, similar to uniprot|P07347 Saccharomyces cerevisiae YHR013C N-terminal acetyltransferase complex ARD1 subunit (EC 2.3.1.-)(Arrest-defective protein 1), similar to Saccharomyces cerevisiae ARD1 (YHR013C); ancestral locus Anc_5.600
YALI1_B07809g	Compare to YALI0B05764g, weakly similar to uniprot|P38758 Saccharomyces cerevisiae YHR009C Hypothetical 57.0 kDa protein in SOD2- RPL27A intergenic region, similar to Saccharomyces cerevisiae YHR009C; ancestral locus Anc_5.592
YALI1_B07843g	Compare to YALI0B05786g, similar to uniprot|Q8X0S2 Neurospora crassa Related to syntaxin family member TLG1, similar to Saccharomyces cerevisiae TLG1 (YDR468C); ancestral locus Anc_5.593
YALI1_B07852g	Compare to YALI0B05808g, similar to uniprot|P38276 Saccharomyces cerevisiae YBR137w
YALI1_B07853g	Compare to YALI0B05830g, similar to Saccharomyces cerevisiae SDC1 (YDR469W); ancestral locus Anc_5.594, weakly similar to uniprot|Q10661 Caenorhabditis elegans Dosage compensation protein dpy-30 (Dumpty-30 protein)
YALI1_B07864g	Compare to YALI0B05852g, similar to uniprot|Q03327 Saccharomyces cerevisiae YDR470c, similar to Saccharomyces cerevisiae UGO1 (YDR470C); ancestral locus Anc_5.595
YALI1_B07915g	Compare to YALI0B05874g, some similarities with uniprot|P25386 Saccharomyces cerevisiae YDL058w USO1 intracellular protein transport protein
YALI1_B07937g	Compare to YALI0B05896g, similar to uniprot|P0C2H6 Saccharomyces cerevisiae YHR010w RPL27A and similar to uniprot|P0C2H7 Saccharomyces cerevisiae YDR471W RPL27B Ribosomal Protein of the Large subunit, similar to Saccharomyces cerevisiae RPL27B (YDR471W) and RPL27A (YHR010W); ancestral locus Anc_5.597
YALI1_B07957g	Compare to YALI0B05918g, similar to Saccharomyces cerevisiae DIA4 (YHR011W); ancestral locus Anc_5.598, similar to uniprot|P38705 Saccharomyces cerevisiae Putative seryl-tRNA synthetase YHR011W (EC 6.1.1.11)
YALI1_B07983g	Compare to YALI0B05940g, similar to uniprot|Q03280 Saccharomyces cerevisiae YDR457w TOM1 E3 ubiqitin ligase
YALI1_B08094g	Compare to YALI0B05962g, no similarity
YALI1_B08123g	Compare to YALI0B06006g, similar to uniprot|P40459 Saccharomyces cerevisiae YIL145C Pantoate--beta-alanine ligase (EC 6.3.2.1), similar to Saccharomyces cerevisiae PAN6 (YIL145C); ancestral locus Anc_5.697
YALI1_B08134g	Compare to YALI0B06028g, weakly similar to uniprot|Q7RYZ0 Neurospora crassa NCU06425.1 predicted protein
YALI1_B08156g	Compare to YALI0B06094g, similar to Saccharomyces cerevisiae YOR022C; ancestral locus Anc_5.604, weakly similar to uniprot|Q12204 Saccharomyces cerevisiae YOR022c weak similarity to D.melanogaster probable Ca2+ transporter rdgB
YALI1_B08186g	Truncated form of YALI0B06105g, similar to Saccharomyces cerevisiae YOL086W-A; ancestral locus Anc_3.116,gnl|GLV|YALI0B06105g [Yarrowia lipolytica] similar to uniprot|Q9C2B3 Neurospora crassa Hypothetical protein B11N2.150
YALI1_B08193g	Compare to YALI0B06116g, similar to Saccharomyces cerevisiae MRPS9 (YBR146W); ancestral locus Anc_3.117, similar to uniprot|P38120 Saccharomyces cerevisiae YBR146W Probable 40S ribosomal protein S9 mitochondrial precursor
YALI1_B08247g	Compare to YALI0B06138g, highly similar to uniprot|Q6C8X6 Yarrowia lipolytica YALI0D16115g
YALI1_B08263g	Compare to YALI0B06160g, highly similar to uniprot|Q6CH24 Yarrowia lipolytica YALI0A13497g
YALI1_B08321g	Compare to YALI0B06248g, similar to uniprot|O74127 Yarrowia lipolytica ALK1
YALI1_B08401g	Compare to YALI0B06347g, no similarity
YALI1_B08438g	Compare to YALI0B06369g, similar to uniprot|Q08032 Saccharomyces cerevisiae YLR103C Cell division control protein 45, similar to Saccharomyces cerevisiae CDC45 (YLR103C); ancestral locus Anc_8.292
YALI1_B08461g	Compare to YALI0B06391g, similar to uniprot|P49374 Kluyveromyces lactis High- affinity glucose transporter
YALI1_B08493g	Compare to YALI0B06413g, similar to uniprot|Q03558 Saccharomyces cerevisiae YHR179w OYE2 NADPH dehydrogenase (old yellow enzyme) isoform 1
YALI1_B08531g	Compare to YALI0B06490g, highly similar to uniprot|Q6CI39 Yarrowia lipolytica YALI0A02024g
YALI1_B08540g	Compare to YALI0B06512g, similar to uniprot|Q9Y8F5 Emericella nidulans Drug resistance protein MdrA, similar to Saccharomyces cerevisiae TOF1 (YNL273W); ancestral locus Anc_1.79
YALI1_B08580g	Compare to YALI0B06534g, similar to uniprot|O95777 Homo sapiens U6 snRNA- associated Sm-like protein LSm8
YALI1_B08616g	Truncated form of YALI0B06556g, similar to uniprot|P40515 Saccharomyces cerevisiae YIL065c FIS1 protein involved in mitochondrial division, similar to Saccharomyces cerevisiae FIS1 (YIL065C); ancestral locus Anc_7.255
YALI1_B08627g	Compare to YALI0B06578g, similar to Saccharomyces cerevisiae SWS2 (YNL081C); ancestral locus Anc_2.213, similar to uniprot|P53937 Saccharomyces cerevisiae Putative mitochondrial 40S ribosomal protein YNL081C
YALI1_B08650g	Compare to YALI0B06600g, similar to uniprot|P38138 Saccharomyces cerevisiae YBR229c ROT2 glucosidase II catalytic subunit singleton
YALI1_B08699g	Compare to YALI0B06666g, no similarity
YALI1_B08721g	Compare to YALI0B06688g, no similarity
YALI1_B08758g	Compare to YALI0B06710g, some similarities with uniprot|Q9UVF6 Yarrowia lipolytica Pal2 protein and to palH Emericella nidulans
YALI1_B08783g	Compare to YALI0B06732g, similar to DEHA0F07326g Debaryomyces hansenii IPF 8538.1
YALI1_B08801g	Compare to YALI0B06754g, weakly similar to uniprot|P40087 Saccharomyces cerevisiae YER143w DDI1 induced in response to DNA alkylation damage, similar to Saccharomyces cerevisiae DDI1 (YER143W); ancestral locus Anc_8.185
YALI1_B08817g	Compare to YALI0B06776g, similar to uniprot|Q6CB44 Yarrowia lipolytica YALI0C22044g
YALI1_B08831g	Compare to YALI0B06787g, no similarity
YALI1_B08851g	Compare to YALI0B06809g, no similarity
YALI1_B08885g	Compare to YALI0B06831g, highly similar to uniprot|O13350 Kluyveromyces lactis ATP synthase D chain mitochondrial
YALI1_B08898g	Compare to YALI0B06853g, weakly similar to uniprot|P25502 Saccharomyces cerevisiae YKL015w PUT3 Proline utilization trans- activator, similar to Saccharomyces cerevisiae PUT3 (YKL015W); ancestral locus Anc_2.654
YALI1_B08975g	Compare to YALI0B06875g, similar to Saccharomyces cerevisiae URB1 (YKL014C); ancestral locus Anc_2.653, some similarities with uniprot|P34241 Saccharomyces cerevisiae YKL014c
YALI1_B08978g	Compare to YALI0B06897g, similar to Saccharomyces cerevisiae HCS1 (YKL017C); ancestral locus Anc_2.656, similar to uniprot|P34243 Saccharomyces cerevisiae YKL017c DIP1 DNA helicase A
YALI1_B09002g	Compare to YALI0B06919g, no similarity
YALI1_B09025g	Compare to YALI0B06941g, similar to uniprot|Q12189 Saccharomyces cerevisiae YOR095c RKI1 D-ribose-5-phosphate ketol-isomerase, similar to Saccharomyces cerevisiae RKI1 (YOR095C); ancestral locus Anc_2.189
YALI1_B09044g	Compare to YALI0B06963g, similar to uniprot|P53043 Saccharomyces cerevisiae YGR123c PPT1 protein ser/thr phosphatase
YALI1_B09072g	Compare to YALI0B06985g, no similarity
YALI1_B09090g	Compare to YALI0B07007g, similar to uniprot|Q9Y763 Phanerochaete chrysosporium 1 4-benzoquinone reductase
YALI1_B09117g	Compare to YALI0B07029g, similar to uniprot|Q9Y763 Phanerochaete chrysosporium 1 4-benzoquinone reductase
YALI1_B09132g	Compare to YALI0B07051g, no similarity
YALI1_B09144g	Truncated form of YALI0B07073g, similar to uniprot|Q7SAR5 Neurospora crassa NCU06174.1 hypothetical protein
YALI1_B09161g	Compare to YALI0B07095g, similar to Saccharomyces cerevisiae LEO1 (YOR123C); ancestral locus Anc_5.440, similar to uniprot|P38439 Saccharomyces cerevisiae YOR123c LEO1 protein
YALI1_B09211g	Compare to YALI0B07117g, similar to uniprot|P14065 Saccharomyces cerevisiae YOR120w GCY1 galactose-induced protein of aldo/keto reductase family, similar to Saccharomyces cerevisiae YPR1 (YDR368W) and GCY1 (YOR120W); ancestral locus Anc_5.434
YALI1_B09258g	Compare to YALI0B07161g, similar to Saccharomyces cerevisiae YGR272C; ancestral locus Anc_5.30, weakly similar to ca|CA3402 Candida albicans IPF8651 unknown function
YALI1_B09266g	Compare to YALI0B07183g, similar to Saccharomyces cerevisiae PFY1 (YOR122C); ancestral locus Anc_5.439, similar to uniprot|P07274 Saccharomyces cerevisiae YOR122c PFY1 profilin
YALI1_B09279g	Compare to YALI0B07205g, highly similar to uniprot|Q03554 Saccharomyces cerevisiae YMR292w GOT1 membrane protein required for ER to Golgi transport, similar to Saccharomyces cerevisiae GOT1 (YMR292W); ancestral locus Anc_5.35
YALI1_B09299g	Compare to YALI0B07227g, similar to Saccharomyces cerevisiae IAH1 (YOR126C); ancestral locus Anc_5.449, similar to uniprot|P41734 Saccharomyces cerevisiae YOR126C Isoamyl acetate-hydrolyzing esterase (EC 3.1.-.-)
YALI1_B09310g	Compare to YALI0B07249g, similar to Saccharomyces cerevisiae YLR104W; ancestral locus Anc_8.293, weakly similar to uniprot|Q08045 Saccharomyces cerevisiae YLR104W hypothetical protein
YALI1_B09320g	Compare to YALI0B07271g, no similarity
YALI1_B09333g	Compare to YALI0B07293g, similar to uniprot|P16658 Saccharomyces cerevisiae YLR105C tRNA-splicing endonuclease subunit SEN2 (EC 3.1.27. 9), similar to Saccharomyces cerevisiae SEN2 (YLR105C); ancestral locus Anc_8.294
YALI1_B09367g	Compare to YALI0B07359g, similar to uniprot|P49954 Saccharomyces cerevisiae YLR351c NIT3 nitrilase P2.240.f2.1
YALI1_B09448g	Compare to YALI0B07381g, similar to Saccharomyces cerevisiae TUB4 (YLR212C); ancestral locus Anc_7.323, highly similar to uniprot|Q9Y882 Schizosaccharomyces japonicus Tubulin gamma chain (Gamma tubulin)
YALI1_B09497g	Compare to YALI0B07403g, some similarities with uniprot|P38195 Saccharomyces cerevisiae YBL043w ECM13 involved in cell wall structure of biosynthesis
YALI1_B09568g	Compare to YALI0B07425g, similar to uniprot|P79003 Saccharomyces pastorianus RER1 protein (Retention of ER proteins 1)
YALI1_B09592g	Compare to YALI0B07447g, similar to uniprot|P06208 Saccharomyces cerevisiae YNL104C 2-isopropylmalate synthase (EC 4.1.3.12) (Alpha- isopropylmalate synthase) (Alpha-IPM synthetase)
YALI1_B09708g	Compare to YALI0B07513g, similar to uniprot|P32863 Saccharomyces cerevisiae YGL163c RAD54 DNA-dependent ATPase of the SNF2P family
YALI1_B09807g	Compare to YALI0B07535g, weakly similar to uniprot|P19158 Saccharomyces cerevisiae YOL081w IRA2 GTPase-activating protein for RAS proteins, similar to Saccharomyces cerevisiae IRA1 (YBR140C) and IRA2 (YOL081W); ancestral locus Anc_3.124
YALI1_B09837g	Compare to YALI0B07557g, weakly similar to uniprot|Q9WTY5 Mus musculus ERFS, similar to Saccharomyces cerevisiae SUP35 (YDR172W); ancestral locus Anc_8.370
YALI1_B09894g	Compare to YALI0B07579g, some similarities with uniprot|P14922 Saccharomyces cerevisiae YBR112c CYC8 general repressor of transcription singleton
YALI1_B09993g	Compare to YALI0B07601g, similar to Saccharomyces cerevisiae YLR414C; ancestral locus Anc_4.286, weakly similar to uniprot|Q06991 Saccharomyces cerevisiae YLR414C SIMILARITY to hypothetical 81 kDa protein in CNB1-ORD1 intergenic region
YALI1_B10032g	Compare to YALI0B07623g, similar to Saccharomyces cerevisiae BUD4 (YJR092W); ancestral locus Anc_7.463, some similarities with uniprot|P53705 Candida albicans Integrin alpha chain-like protein (Alpha-INT1)
YALI1_B10094g	Truncated form of YALI0B07645g, similar to uniprot|Q6C398 Yarrowia lipolytica YALI0F01518g
YALI1_B10130g	Compare to YALI0B07667g, uniprot|Q8X1D9 Yarrowia lipolytica Phosphoribosylanthranilate isomerase Trp1, similar to Saccharomyces cerevisiae TRP1 (YDR007W); ancestral locus Anc_3.192
YALI1_B10145g	Compare to YALI0B07689g, some similarities with uniprot|Q12090 Saccharomyces cerevisiae YLR107W
YALI1_B10182g	Compare to YALI0B07711g, no similarity
YALI1_B10231g	Compare to YALI0B07755g, weakly similar to uniprot|Q7SDW1 Neurospora crassa NCU03295.1 related to 4-coumarate-CoA ligase
YALI1_B10263g	Compare to YALI0B07777g, no similarity
YALI1_B10288g	Converted to coding from non-coding YALI0B07876g, similar to uniprot|Q06593 Saccharomyces cerevisiae YPR194c OPT2 no start
YALI1_B10359g	Compare to YALI0B07898g, similar to uniprot|Q06593 Saccharomyces cerevisiae YPR194c OPT2
YALI1_B10424g	Converted to coding from non-coding YALI0B07942g, weakly similar to uniprot|Q06593 Saccharomyces cerevisiae YPR194c OPT2 no start
YALI1_B10437g	Converted to coding from non-coding YALI0B07942g, weakly similar to uniprot|Q06593 Saccharomyces cerevisiae YPR194c OPT2 no start
YALI1_B10449g	Truncated form of YALI0B08008g, some similarities with uniprot|Q871I9 Neurospora crassa NCU08954.1 20H10.300
YALI1_B10463g	Compare to YALI0B08030g, uniprot|Q96VC9 Yarrowia lipolytica Carboxylesterase/lipase type B
YALI1_B10525g	Compare to YALI0B08052g, similar to uniprot|Q03049 Saccharomyces cerevisiae YDR541c similarity to dihydroflavonol-4-reductases
YALI1_B10552g	Compare to YALI0B08074g, similar to Saccharomyces cerevisiae MRPL24 (YMR193W); ancestral locus Anc_6.282, weakly similar to CAGL0K10912g Candida glabrata
YALI1_B10582g	Compare to YALI0B08096g, weakly similar to uniprot|Q07895 Saccharomyces cerevisiae YLR001c, similar to Saccharomyces cerevisiae YLR001C; ancestral locus Anc_5.219
YALI1_B10607g	Compare to YALI0B08118g, weakly similar to KLLA0C06072g Kluyveromyces lactis
YALI1_B10635g	Compare to YALI0B08140g, similar to uniprot|P18408 Saccharomyces cerevisiae YPR167c MET16 Phosphoadenosine phosphosulfate reductase (EC 1.8.4.8) (PAPS reductase thioredoxin dependent) (PAdoPS reductase) (3 - phosphoadenylylsulfate reductase), similar to Saccharomyces cerevisiae MET16 (YPR167C); ancestral locus Anc_7.523
YALI1_B10751g	Converted to coding from non-coding YALI0B08162g, similar to Saccharomyces cerevisiae SPE1 (YKL184W); ancestral locus Anc_4.282, some similarities with uniprot|P08432 Saccharomyces cerevisiae YKL184w ORD1 ornithine carboxylase fragment
YALI1_B10813g	Compare to YALI0B08184g, similar to Saccharomyces cerevisiae MET3 (YJR010W); ancestral locus Anc_5.154, highly similar to uniprot|Q8NJN1 Aspergillus niger and to to uniprot|P08536 Saccharomyces cerevisiae YJR010w MET3 ATP sulfurylase
YALI1_B10891g	Compare to YALI0B08206g, similar to Saccharomyces cerevisiae CUP2 (YGL166W) and HAA1 (YPR008W); ancestral locus Anc_8.106, uniprot|P45815 Yarrowia lipolytica Copper resistance protein CRF1
YALI1_B10990g	Compare to YALI0B08228g, similar to Saccharomyces cerevisiae YRB30 (YGL164C); ancestral locus Anc_8.107, weakly similar to uniprot|P53107 Saccharomyces cerevisiae YGL164C Ran-specific GTPase-activating protein 30 (Ran-binding protein 30) (RANBP30)
YALI1_B11083g	Compare to YALI0B08250g, highly similar to uniprot|Q9HGI5 Yarrowia lipolytica eukaryotic peptide chain release factor GTP- binding subunit 3, similar to Saccharomyces cerevisiae SUP35 (YDR172W); ancestral locus Anc_8.370
YALI1_B11131g	Compare to YALI0B08272g, some similarities with uniprot|P08965 Schizosaccharomyces pombe Meiosis protein mei2
YALI1_B11167g	Compare to YALI0B08294g, similar to Saccharomyces cerevisiae YER134C, similar to uniprot|O94279 Schizosaccharomyces pombe Hypothetical 20.5 kDa protein
YALI1_B11183g	Truncated form of YALI0B08316g, weakly similar to DEHA0B15136g Debaryomyces hansenii, similar to Saccharomyces cerevisiae YEL048C; ancestral locus Anc_1.491
YALI1_B11200g	Truncated form of YALI0B08338g, similar to uniprot|Q12019 Saccharomyces cerevisiae YLR106C Midasin (MIDAS-containing protein), similar to Saccharomyces cerevisiae MDN1 (YLR106C); ancestral locus Anc_8.295
YALI1_B11388g	Compare to YALI0B08360g, similar to uniprot|Q6C189 Yarrowia lipolytica YALI0F18326g
YALI1_B11398g	Compare to YALI0B08382g, no similarity
YALI1_B11402g	Compare to YALI0B08404g, weakly similar to uniprot|Q9P7F4 Schizosaccharomyces pombe Putative dehydrogenase
YALI1_B11415g	Compare to YALI0B08426g, no similarity
YALI1_B11448g	Compare to YALI0B08448g, similar to KLLA0D12606g Kluyveromyces lactis IPF 4552.1
YALI1_B11484g	Compare to YALI0B08470g, weakly similar to uniprot|P30776 Schizosaccharomyces pombe Double-strand-break repair protein rad21 (Cohesin complex Rad 21 subunit), similar to Saccharomyces cerevisiae MCD1 (YDL003W); ancestral locus Anc_3.212
YALI1_B11495g	Compare to YALI0B08492g, no similarity
YALI1_B11519g	Compare to YALI0B08514g, similar to uniprot|Q05636 Saccharomyces cerevisiae YDR280W Exosome complex exonuclease RRP45 (EC 3.1.13.-) (Ribosomal RNA processing protein 45), similar to Saccharomyces cerevisiae RRP45 (YDR280W); ancestral locus Anc_5.289
YALI1_B11532g	Compare to YALI0B08536g, similar to uniprot|Q04677 Candida tropicalis Acetyl- CoA acetyltransferase IB (EC 2.3.1.9) Peroxisomal acetoacetyl- CoA thiolase Thiolase IB, similar to Saccharomyces cerevisiae ERG10 (YPL028W); ancestral locus Anc_8.479
YALI1_B11607g	Compare to YALI0B08558g, similar to Saccharomyces cerevisiae VHS1 (YDR247W) and SKS1 (YPL026C); ancestral locus Anc_8.477, weakly similar to uniprot|Q03785 Saccharomyces cerevisiae YDR247w VHS1 and weakly similar to uniprot|Q12505 Saccharomyces cerevisiae YPL026C Serine/threonine-protein kinase SKS1 (Suppressor kinase of SNF3)
YALI1_B11648g	Compare to YALI0B08624g, weakly similar to CAGL0B04279g Candida glabrata, similar to Saccharomyces cerevisiae YBR030W; ancestral locus Anc_3.231
YALI1_B11681g	Compare to YALI0B08690g, no similarity
YALI1_B11715g	Compare to YALI0B08712g, similar to uniprot|Q7S227 Neurospora crassa NCU09887.1 related to glucose-6-phosphate/phosphate translocator
YALI1_B11759g	Compare to YALI0B08734g, similar to Saccharomyces cerevisiae REH1 (YLR387C); ancestral locus Anc_4.243, similar to CAGL0I09350g Candida glabrata and uniprot|P38344 Saccharomyces cerevisiae YBR267W 45.8 kDa protein in SHM1-MRPL37 intergenic region
YALI1_B11794g	Compare to YALI0B08756g, similar to Saccharomyces cerevisiae TSR1 (YDL060W); ancestral locus Anc_4.244, weakly similar to DEHA0A12001g Debaryomyces hansenii
YALI1_B11853g	Compare to YALI0B08778g, similar to Saccharomyces cerevisiae LHS1 (YKL073W); ancestral locus Anc_2.618, weakly similar to uniprot|P36016 Saccharomyces cerevisiae YKL073w Heat shock protein 70 homolog LHS1 precursor
YALI1_B11878g	Compare to YALI0B08800g, no similarity
YALI1_B11916g	Compare to YALI0B08844g, similar to Saccharomyces cerevisiae PAC10 (YGR078C); ancestral locus Anc_3.134, similar to uniprot|P48363 Saccharomyces cerevisiae YGR078c PAC10 GIM4 - Gim complex component
YALI1_B11934g	Compare to YALI0B08866g, similar to uniprot|P07279 Saccharomyces cerevisiae YNL301C 60S ribosomal protein L18 (RP28), similar to Saccharomyces cerevisiae RPL18B (YNL301C) and RPL18A (YOL120C); ancestral locus Anc_3.52
YALI1_B11960g	Compare to YALI0B08899g, similar to Saccharomyces cerevisiae YPR098C; ancestral locus Anc_3.411, weakly similar to DEHA0E16588g Debaryomyces hansenii
YALI1_B11983g	Compare to YALI0B08921g, similar to Saccharomyces cerevisiae SOD2 (YHR008C); ancestral locus Anc_5.590, similar to uniprot|O13401 Candida albicans Superoxide dismutase [Mn] mitochondrial precursor (EC 1.15. 1.1)
YALI1_B12010g	Compare to YALI0B08943g, similar to uniprot|Q12109 Saccharomyces cerevisiae YOL097C Tryptophanyl-tRNA synthetase cytoplasmic (EC 6.1.1. 2) (Tryptophan-- tRNA ligase) (TrpRS), similar to Saccharomyces cerevisiae WRS1 (YOL097C); ancestral locus Anc_3.97
YALI1_B12042g	Compare to YALI0B08965g, similar to uniprot|Q99258 Saccharomyces cerevisiae YDR487c RIB3 3 4-dihydroxy-2-butanone 4-phosphate synthase, similar to Saccharomyces cerevisiae RIB3 (YDR487C); ancestral locus Anc_3.96
YALI1_B12057g	Compare to YALI0B08987g, highly similar to uniprot|O93996 Candida albicans Conserved hypothetical protein (CTA1P), similar to Saccharomyces cerevisiae VPS60 (YDR486C); ancestral locus Anc_3.98
YALI1_B12101g	Compare to YALI0B09009g, weakly similar to uniprot|Q08967 Saccharomyces cerevisiae YPL221w BOP1
YALI1_B12154g	Compare to YALI0B09031g, no similarity
YALI1_B12195g	Compare to YALI0B09053g, similar to uniprot|Q80X98 Mus musculus 5730550P09Rik protein and uniprot|P15938 Saccharomyces cerevisiae YKR086w PRP16 RNA-dependent ATPase, similar to Saccharomyces cerevisiae PRP16 (YKR086W); ancestral locus Anc_5.683
YALI1_B12204g	Compare to YALI0B09075g, weakly similar to uniprot|P22354 Saccharomyces cerevisiae YKR085c 60S ribosomal protein L20 mitochondrial precursor (YmL20), similar to Saccharomyces cerevisiae MRPL20 (YKR085C); ancestral locus Anc_5.682
YALI1_B12243g	Compare to YALI0B09119g, similar to Saccharomyces cerevisiae YOL022C; ancestral locus Anc_1.365, similar to uniprot|P25040 Saccharomyces cerevisiae YOL022c
YALI1_B12267g	Compare to YALI0B09141g, no similarity
YALI1_B12295g	Compare to YALI0B09163g, similar to uniprot|P08540 Kluyveromyces lactis potential acid phosphatase
YALI1_B12337g	Compare to YALI0B09229g, weakly similar to uniprot|Q9P6N2 Schizosaccharomyces pombe Hypothetical 26.3 kDa protein, similar to Saccharomyces cerevisiae YNL010W; ancestral locus Anc_1.395
YALI1_B12375g	Compare to YALI0B09251g, weakly similar to CA3585|CaIFT1 Candida albicans CaIFT1 unknown function
YALI1_B12409g	Compare to YALI0B09273g, similar to uniprot|Q99385 Saccharomyces cerevisiae YDL128w VCX1 Ca2+-transport (H+/Ca2+ exchange) protein vacuolar
YALI1_B12427g	Compare to YALI0B09295g, similar to uniprot|P38874 Saccharomyces cerevisiae YHR187w IKI1 confers sensitivity to killer toxin, similar to Saccharomyces cerevisiae IKI1 (YHR187W); ancestral locus Anc_5.48
YALI1_B12443g	Compare to YALI0B09317g, some similarities with CA2864|IPF17234.3 Candida albicans unknown function and uniprot|Q89C88 Bradyrhizobium japonicum Blr7909 protein
YALI1_B12451g	Compare to YALI0B09339g, similar to Saccharomyces cerevisiae RPN13 (YLR421C); ancestral locus Anc_4.295, similar to uniprot|O13563 Saccharomyces cerevisiae YLR421c RPN13 weak similarity to human 42K membrane glycoprotein
YALI1_B12489g	Compare to YALI0B09361g, uniprot|Q872L3 Yarrowia lipolytica Lipase (EC 3.1.1. 3)
YALI1_B12529g	Truncated form of YALI0B09383g, weakly similar to uniprot|Q03767 Saccharomyces cerevisiae YDR150W NUM1 tubulin binding, similar to Saccharomyces cerevisiae NUM1 (YDR150W); ancestral locus Anc_8.331
YALI1_B12633g	Compare to YALI0B09427g, some similarities with uniprot|Q9P6I2 Schizosaccharomyces pombe Glutamate carboxypeptidase-like protein
YALI1_B12677g	Compare to YALI0B09449g, similar to Saccharomyces cerevisiae YGR042W; ancestral locus Anc_4.187, no similarity
YALI1_B12691g	Compare to YALI0B09471g, similar to uniprot|O60121 Schizosaccharomyces pombe Stomatin family protein
YALI1_B12714g	Converted to coding from non-coding YALI0B09493g, similar to uniprot|Q03558 Saccharomyces cerevisiae YHR179w OYE2 NADPH dehydrogenase (old yellow enzyme) isoform 1 relics
YALI1_B12742g	Compare to YALI0B09515g, some similarities with uniprot|Q9HBU6 Homo sapiens Ethanolamine kinase (EC 2.7.1.82) (EKI)
YALI1_B12781g	Compare to YALI0B09537g, similar to uniprot|Q9URZ3 Schizosaccharomyces pombe Amino-acid permease
YALI1_B12847g	Compare to YALI0B09559g, similar to Saccharomyces cerevisiae BRE1 (YDL074C); ancestral locus Anc_4.268, similar to uniprot|Q07457 Saccharomyces cerevisiae YDL074c BRE1 weak similarity to spindle pole body protein NUF1
YALI1_B12874g	Compare to YALI0B09581g, no similarity
YALI1_B12917g	Truncated form of YALI0B09603g, similar to Saccharomyces cerevisiae YAP1802 (YGR241C) and YAP1801 (YHR161C); ancestral locus Anc_5.84, weakly similar to uniprot|P38856 Saccharomyces cerevisiae YHR161c YAP1801 Yeast Adaptor Protein member of AP180 protein family
YALI1_B12966g	Compare to YALI0B09625g, similar to Saccharomyces cerevisiae PUT1 (YLR142W); ancestral locus Anc_8.348, weakly similar to uniprot|P09368 Saccharomyces cerevisiae YLR142w PUT1 Proline oxidase mitochondrial precursor (EC 1.5.3.-) (Proline dehydrogenase)
YALI1_B12993g	Compare to YALI0B09647g, similar to Saccharomyces cerevisiae PUT2 (YHR037W); ancestral locus Anc_5.308, similar to uniprot|P07275 Saccharomyces cerevisiae YHR037W Delta-1-pyrroline-5-carboxylate dehydrogenase mitochondrial precursor (EC 1.5.1.12) (P5C dehydrogenase)
YALI1_B13041g	Compare to YALI0B09669g, similar to uniprot|Q96V37 Pichia pastoris Ceramide glucosyltransferase
YALI1_B13069g	Compare to YALI0B09713g, weakly similar to uniprot|P07272 Saccharomyces cerevisiae YLR014C Pyrimidine pathway regulatory protein 1, similar to Saccharomyces cerevisiae PPR1 (YLR014C); ancestral locus Anc_5.235
YALI1_B13112g	Compare to YALI0B09735g, weakly similar to uniprot|Q6C4Q3 Yarrowia lipolytica YALI0E24585g
YALI1_B13122g	Compare to YALI0B09757g, no similarity
YALI1_B13137g	Compare to YALI0B09779g, similar to uniprot|Q07915 Saccharomyces cerevisiae YLR009w similarity to ribosomal protein L24.e.B, similar to Saccharomyces cerevisiae RLP24 (YLR009W); ancestral locus Anc_5.233
YALI1_B13150g	Compare to YALI0B09812g, similar to CA4067|IPF5924 Candida albicans IPF5924 unknown function, similar to Saccharomyces cerevisiae YNR040W; ancestral locus Anc_6.360
YALI1_B13179g	Truncated form of YALI0B09845g, similar to uniprot|P16451 Saccharomyces cerevisiae YGR193c PDX1 pyruvate dehydrogenase complex protein X, similar to Saccharomyces cerevisiae PDX1 (YGR193C); ancestral locus Anc_5.153
YALI1_B13259g	Truncated form of YALI0B09867g, weakly similar to KLLA-IPF2857.1 Kluyveromyces lactis KLLA0E14586g putative flocculation protein
YALI1_B13290g	Compare to YALI0B09889g, weakly similar to uniprot|O14342 Schizosaccharomyces pombe Hypothetical protein C2F12.12c in chromosome II
YALI1_B13328g	Compare to YALI0B09955g, no similarity
YALI1_B13355g	Compare to YALI0B09977g, similar to uniprot|P39014 Saccharomyces cerevisiae YIL046w MET30 involved in regulation of sulfur assimilation genes and cell cycle progression
YALI1_B13439g	Compare to YALI0B09991g, some similarities with DEHA0D15972g Debaryomyces hansenii IPF 2966.1
YALI1_B13483g	Compare to YALI0B09999g, weakly similar to uniprot|Q8ES18 Oceanobacillus iheyensis 2-nitropropane dioxygenase
YALI1_B13536g	Compare to YALI0B10021g, similar to uniprot|P38861 Saccharomyces cerevisiae YHR170w NMD3 nonsense-mediated mRNA decay protein singleton, similar to Saccharomyces cerevisiae NMD3 (YHR170W); ancestral locus Anc_5.67
YALI1_B13556g	Compare to YALI0B10043g, similar to KLLA0F25124g Kluyveromyces lactis Similar to uniprot|P43571 Saccharomyces cerevisiae YFL025c BST1 negative regulator of COPII vesicle
YALI1_B13586g	Compare to YALI0B10065g, similar to uniprot|P47083 Saccharomyces cerevisiae YJR002w MPP10 component of the U3 small nucleolar ribonucleoprotein singleton, similar to Saccharomyces cerevisiae MPP10 (YJR002W); ancestral locus Anc_5.221
YALI1_B13614g	Compare to YALI0B10087g, some similarities with KLLA0B09350g Kluyveromyces lactis IPF 7260.1
YALI1_B13641g	Compare to YALI0B10109g, no similarity
YALI1_B13662g	Compare to YALI0B10131g, similar to uniprot|P38256 Saccharomyces cerevisiae YBR096w Hypothetical 27.1 kDa protein
YALI1_B13699g	Compare to YALI0B10153g, similar to uniprot|Q9HF05 Emericella nidulans Oleate delta-12 desaturase
YALI1_B13723g	Compare to YALI0B10175g, similar to uniprot|Q839Q1 Enterococcus faecalis EF0111 Oxidoreductase zinc-binding
YALI1_B13737g	Compare to YALI0B10197g, similar to Saccharomyces cerevisiae MSH3 (YCR092C); ancestral locus Anc_6.372, similar to uniprot|P25846 Saccharomyces cerevisiae YHR120w MSH1 DNA mismatch repair protein mitochondrial
YALI1_B13800g	Compare to YALI0B10219g, similar to Saccharomyces cerevisiae NAF1 (YNL124W); ancestral locus Anc_2.146, some similarities with CAGL0L04114g Candida glabrata and uniprot|P53919 Saccharomyces cerevisiae YNL124W Hypothetical 54.9 kDa protein in SPC98-TOM70 intergenic region
YALI1_B13828g	Compare to YALI0B10241g, some similarities with uniprot|P39083 Saccharomyces cerevisiae YOR127w RGA1 RHO-type GTPase-activating protein for CDC42P
YALI1_B13886g	Compare to YALI0B10263g, similar to uniprot|P53923 Saccharomyces cerevisiae YNL119w Hypothetical 56.5 kDa protein, similar to Saccharomyces cerevisiae NCS2 (YNL119W); ancestral locus Anc_2.154
YALI1_B13888g	Compare to YALI0B10274g, similar to Saccharomyces cerevisiae COX23 (YHR116W); ancestral locus Anc_2.153, some similarities with DEHA0F21846g Debaryomyces hansenii IPF 6411.1 and uniprot|P38824 Saccharomyces cerevisiae YHR116W Hypothetical 17.3 kDa protein in ERP5- ORC6 intergenic region
YALI1_B13915g	Compare to YALI0B10296g, some similarities with uniprot|Q9P6S5 Schizosaccharomyces pombe SPBC27.02C Hypothetical 34.6 kDa protein
YALI1_B13917g	Compare to YALI0B10318g, similar to Saccharomyces cerevisiae BET5 (YML077W); ancestral locus Anc_4.345, weakly similar to uniprot|Q03630 Saccharomyces cerevisiae YML077w BET5 involved in targeting and fusion of ER to golgi transport vesicles
YALI1_B13948g	Compare to YALI0B10340g, similar to uniprot|O42620 Magnaporthe grisea Carnitine acetyl transferase, similar to Saccharomyces cerevisiae CAT2 (YML042W); ancestral locus Anc_5.512
YALI1_B13973g	Compare to YALI0B10362g, similar to uniprot|Q9HEG7 Neurospora crassa Mitochondrial precursor protein import receptor tom70
YALI1_B14013g	Compare to YALI0B10384g, no similarity
YALI1_B14044g	Compare to YALI0B10406g, similar to uniprot|Q9V6U5 Drosophila melanogaster LD24265p
YALI1_B14064g	Compare to YALI0B10428g, some similarities with DEHA0B05896g Debaryomyces hansenii IPF 9628.1
YALI1_B14121g	Compare to YALI0B10450g, similar to Saccharomyces cerevisiae FPR1 (YNL135C); ancestral locus Anc_2.131, highly similar to uniprot|P20081 Saccharomyces cerevisiae YNL135c FPR1 peptidyl-prolyl cis-trans isomerase FK506-binding protein P4.1.f4.1
YALI1_B14147g	Compare to YALI0B10472g, similar to Saccharomyces cerevisiae EAF7 (YNL136W); ancestral locus Anc_2.130, no similarity
YALI1_B14150g	Compare to YALI0B10494g, similar to Saccharomyces cerevisiae NAM9 (YNL137C); ancestral locus Anc_2.129, similar to CAGL0K09768g Candida glabrata Similar to uniprot|P27929 Saccharomyces cerevisiae YNL137c NAM9 ribosomal protein mitochondrial
YALI1_B14187g	Compare to YALI0B10516g, similar to Saccharomyces cerevisiae SRV2 (YNL138W); ancestral locus Anc_2.128, similar to uniprot|P17555 Saccharomyces cerevisiae YNL138w SRV2 adenylate cyclase-associated protein 70kDa
YALI1_B14194g	Compare to YALI0B10538g, similar to Saccharomyces cerevisiae ARP5 (YNL059C); ancestral locus Anc_2.248, similar to uniprot|P53946 Saccharomyces cerevisiae YNL059c ARP5Actin-related protein
YALI1_B14236g	Compare to YALI0B10560g, similar to uniprot|P40991 Saccharomyces cerevisiae YNL061w NOP2 nucleolar protein, similar to Saccharomyces cerevisiae NOP2 (YNL061W); ancestral locus Anc_2.247
YALI1_B14238g	Compare to YALI0B10582g, similar to Saccharomyces cerevisiae GCD10 (YNL062C); ancestral locus Anc_2.246, similar to uniprot|P41814 Saccharomyces cerevisiae YNL062c GCD10translation initiation factor eIF3 RNA- binding subunit
YALI1_B14268g	Compare to YALI0B10604g, similar to uniprot|Q881B2 Pseudomonas syringae Xenobiotic compound monooxygenase DszA family
YALI1_B14292g	Compare to YALI0B10626g, similar to uniprot|Q6C398 Yarrowia lipolytica YALI0F01518g
YALI1_B14325g	Compare to YALI0B10692g, similar to Saccharomyces cerevisiae SNU66 (YOR308C); ancestral locus Anc_8.786, weakly similar to uniprot|Q12420 Saccharomyces cerevisiae YOR308c component of U4/U6.U5 snRNP
YALI1_B14355g	Compare to YALI0B10714g, similar to Saccharomyces cerevisiae SLY41 (YOR307C); ancestral locus Anc_8.785, weakly similar to uniprot|P22215 Saccharomyces cerevisiae YOR307c SLY41 secretory pathway protein
YALI1_B14382g	Compare to YALI0B10736g, similar to Saccharomyces cerevisiae YHM2 (YMR241W); ancestral locus Anc_8.784, highly similar to uniprot|Q04013 Saccharomyces cerevisiae YMR241w YHM2 yeast suppressor gene of HM (mitochondrial histone) mutant (ABF2) singleton
YALI1_B14418g	Compare to YALI0B10758g, highly similar to uniprot|P43063 Candida albicans cell division control protein 28
YALI1_B14441g	Compare to YALI0B10780g, similar to uniprot|P39926 Saccharomyces cerevisiae YMR183c SSO2 syntaxin (T-SNARE)
YALI1_B14492g	Compare to YALI0B10802g, similar to uniprot|Q8X005 Neurospora crassa Glycine rich protein (het-COR)
YALI1_B14517g	Compare to YALI0B10824g, some similarities with uniprot|Q08237 Saccharomyces cerevisiae YOL080c REX4
YALI1_B14544g	Compare to YALI0B10846g, similar to uniprot|P36033 Saccharomyces cerevisiae YKL220c FRE2 ferric (and cupric) reductase
YALI1_B14573g	Compare to YALI0B10890g, some similarities with uniprot|Q9V951 Drosophila melanogaster CG9945 protein (AT18160p)
YALI1_B14600g	Compare to YALI0B10912g, similar to Saccharomyces cerevisiae YAF9 (YNL107W); ancestral locus Anc_2.170, similar to uniprot|P53930 Saccharomyces cerevisiae YNL107w YAF9
YALI1_B14615g	Compare to YALI0B10934g, similar to uniprot|Q05123 Saccharomyces cerevisiae YMR033w ARP9 Actin-related protein, similar to Saccharomyces cerevisiae ARP9 (YMR033W); ancestral locus Anc_2.593
YALI1_B14645g	Compare to YALI0B10956g, similar to DEHA0E11704g Debaryomyces hansenii, similar to Saccharomyces cerevisiae YMR034C; ancestral locus Anc_2.594
YALI1_B14658g	Compare to YALI0B10978g, weakly similar to uniprot|P46972 Saccharomyces cerevisiae YMR035w IMP2 mitochondrial inner membrane protease subunit, similar to Saccharomyces cerevisiae IMP2 (YMR035W); ancestral locus Anc_2.595
YALI1_B14680g	Compare to YALI0B11000g, similar to Saccharomyces cerevisiae MRPL4 (YLR439W); ancestral locus Anc_4.320, weakly similar to uniprot|P36517 Saccharomyces cerevisiae YLR439w MRPL4 ribosomal protein mitochondrial
YALI1_B14686g	Compare to YALI0B11022g, similar to uniprot|P57743 Saccharomyces cerevisiae YLR438ca U6 snRNA-associated Sm-like protein LSm3, similar to Saccharomyces cerevisiae LSM3 (YLR438C-A); ancestral locus Anc_4.319
YALI1_B14733g	Compare to YALI0B11044g, similar to uniprot|Q9USJ4 Schizosaccharomyces pombe hypothetical UPF0028 family protein, similar to Saccharomyces cerevisiae NTE1 (YML059C); ancestral locus Anc_4.318
YALI1_B14752g	Compare to YALI0B11066g, no similarity
YALI1_B14793g	Compare to YALI0B11088g, no similarity
YALI1_B14804g	Compare to YALI0B11132g, weakly similar to uniprot|P34232 Saccharomyces cerevisiae YKL186c MTR2 mRNA transport protein
YALI1_B14826g	Compare to YALI0B11154g, similar to Saccharomyces cerevisiae LCB5 (YLR260W) and LCB4 (YOR171C); ancestral locus Anc_6.48, similar to uniprot|Q06147 Saccharomyces cerevisiae YLR260w LCB5 sphingolipid long chain base kinase
YALI1_B14844g	Compare to YALI0B11176g, weakly similar to uniprot|Q09707 Schizosaccharomyces pombe putative acetyltransferase C18B11.09c (EC 2.3.1.-), similar to Saccharomyces cerevisiae YJL218W
YALI1_B14882g	Compare to YALI0B11220g, no similarity, no similarity
YALI1_B14924g	Compare to YALI0B11242g, weakly similar to uniprot|Q09910 Schizosaccharomyces pombe Hypothetical protein C30D11.11 in chromosome I
YALI1_B14948g	Compare to YALI0B11264g, no similarity
YALI1_B14978g	Compare to YALI0B11286g, similar to Saccharomyces cerevisiae ARG82 (YDR173C); ancestral locus Anc_8.371, weakly similar to uniprot|P07250 Saccharomyces cerevisiae YDR173c ARG82 arginine metabolism transcription factor singleton
YALI1_B14993g	Compare to YALI0B11308g, similar to Saccharomyces cerevisiae RPL38 (YLR325C); ancestral locus Anc_4.141, similar to uniprot|P49167 Saccharomyces cerevisiae YLR325c RPL38 60S large subunit ribosomal protein
YALI1_B15015g	Compare to YALI0B11330g, similar to Saccharomyces cerevisiae SPE1 (YKL184W); ancestral locus Anc_4.282, uniprot|Q8WZM1 Yarrowia lipolytica Ornithine decarboxylase
YALI1_B15072g	Compare to YALI0B11352g, similar to uniprot|P24384 Saccharomyces cerevisiae YER013w PRP22 pre-mRNA splicing factor, similar to Saccharomyces cerevisiae PRP22 (YER013W); ancestral locus Anc_7.163
YALI1_B15092g	Compare to YALI0B11374g, similar to uniprot|P22141 Saccharomyces cerevisiae YER012w PRE1 20S proteasome subunit C11(beta4) P4.15.f3.1, similar to Saccharomyces cerevisiae PRE1 (YER012W); ancestral locus Anc_7.162
YALI1_B15109g	Compare to YALI0B11396g, similar to uniprot|P10363 Saccharomyces cerevisiae YIR008c PRI1 DNA-directed DNA polymerase alpha 48kDa subunit (DNA primase), similar to Saccharomyces cerevisiae PRI1 (YIR008C); ancestral locus Anc_7.171
YALI1_B15151g	Compare to YALI0B11418g, similar to Saccharomyces cerevisiae YIR007W; ancestral locus Anc_7.172, similar to uniprot|P40566 Saccharomyces cerevisiae YIR007w hypothetical protein
YALI1_B15180g	Compare to YALI0B11440g, weakly similar to uniprot|P38242 Saccharomyces cerevisiae YBR070c SAT2 osmotolerance protein, similar to Saccharomyces cerevisiae ALG14 (YBR070C); ancestral locus Anc_3.289
YALI1_B15192g	Compare to YALI0B11462g, no similarity
YALI1_B15237g	Compare to YALI0B11484g, no similarity, similar to Saccharomyces cerevisiae RXT3 (YDL076C); ancestral locus Anc_4.271
YALI1_B15275g	Compare to YALI0B11506g, no similarity, similar to Saccharomyces cerevisiae YLR407W; ancestral locus Anc_4.272
YALI1_B15307g	Compare to YALI0B11528g, no similarity, similar to Saccharomyces cerevisiae YLR408C; ancestral locus Anc_4.273
YALI1_B15310g	Compare to YALI0B11550g, similar to Saccharomyces cerevisiae VAM6 (YDL077C); ancestral locus Anc_4.274, similar to uniprot|Q873P1 Emericella nidulans AvaB protein
YALI1_B15346g	Compare to YALI0B11572g, weakly similar to uniprot|Q02256 Saccharomyces cerevisiae YIR026c YVH1 protein tyrosine phosphatase singleton, similar to Saccharomyces cerevisiae YVH1 (YIR026C); ancestral locus Anc_2.660
YALI1_B15380g	Compare to YALI0B11594g, similar to uniprot|Q96UQ4 Aspergillus niger Aminopeptidase B,ancestral locus Anc_5.359
YALI1_B15420g	Converted to coding from non-coding YALI0B11616g, some similarities with wi|NCU07816.1 Neurospora crassa NCU07816.1 and with uniprot|P38875 Saccharomyces cerevisiae YHR188c putative transporter frameshift, similar to Saccharomyces cerevisiae GPI16 (YHR188C); ancestral locus Anc_5.47
YALI1_B15440g	Converted to coding from non-coding YALI0B11616g, some similarities with wi|NCU07816.1 Neurospora crassa NCU07816.1 and with uniprot|P38875 Saccharomyces cerevisiae YHR188c putative transporter frameshift
YALI1_B15475g	Compare to YALI0B11660g, no similarity
YALI1_B15482g	Compare to YALI0B11682g, highly similar to uniprot|CAD70726 Neurospora crassa 64C2.100 Probable clathrin assembly protein AP47
YALI1_B15509g	Compare to YALI0B11704g, similar to uniprot|P53081 Saccharomyces cerevisiae YGL221c NIF3 NGG1P-interacting factor 3 singleton, similar to Saccharomyces cerevisiae NIF3 (YGL221C); ancestral locus Anc_3.531
YALI1_B15521g	Compare to YALI0B11726g, similar to Saccharomyces cerevisiae SSL2 (YIL143C); ancestral locus Anc_5.695, highly similar to uniprot|Q00578 Saccharomyces cerevisiae YIL143c SSL2 DNA helicase singleton
YALI1_B15560g	Compare to YALI0B11748g, some similarities with uniprot|P32583 Saccharomyces cerevisiae YKR092c SRP40 suppressor of mutant AC40 of RNA polymerase I and III singleton
YALI1_B15587g	Compare to YALI0B11770g, similar to Saccharomyces cerevisiae SRP40 (YKR092C); ancestral locus Anc_5.694, similar to uniprot|P32583 Saccharomyces cerevisiae YKR092c SRP40 Suppressor protein
YALI1_B15592g	Compare to YALI0B11792g, some similarities with DEHA0E14619g Debaryomyces hansenii IPF 11767.1
YALI1_B15624g	Compare to YALI0B11814g, weakly similar to uniprot|P40460 Saccharomyces cerevisiae YIL144w TID3 DMC1P interacting protein P37.1.f4. 2, similar to Saccharomyces cerevisiae TID3 (YIL144W); ancestral locus Anc_5.696
YALI1_B15655g	Compare to YALI0B11836g, similar to Saccharomyces cerevisiae MDM20 (YOL076W); ancestral locus Anc_3.130, weakly similar to uniprot|Q12387 Saccharomyces cerevisiae YOL076w DEC_1 necessary for mitochondrial inheritance and organisation of the actin cytoskeleton singleton
YALI1_B15670g	Compare to YALI0B11858g, similar to uniprot|Q872L4 Yarrowia lipolytica LIP7 Lipase (EC 3.1.1.3)
YALI1_B15692g	Compare to YALI0B11880g, similar to Saccharomyces cerevisiae BRX1 (YOL077C); ancestral locus Anc_3.129, highly similar to uniprot|Q08235 Saccharomyces cerevisiae Chromosome XV reading frame ORF YOL077C
YALI1_B15706g	Compare to YALI0B11902g, no similarity
YALI1_B15733g	Compare to YALI0B11913g, gnl|GLV|YALI0B11913g [Yarrowia lipolytica] similar to uniprot|P81451 Saccharomyces cerevisiae YOL077w-a ATP19 Subunit K of mitochondrial ATP Synthase, similar to Saccharomyces cerevisiae ATP19 (YOL077W-A); ancestral locus Anc_3.128
YALI1_B15742g	Compare to YALI0B11924g, similar to Saccharomyces cerevisiae AVO1 (YOL078W); ancestral locus Anc_3.126, some similarities with uniprot|Q9P7Y9 Schizosaccharomyces pombe SPAPYUG7.02C SIN1 Stress- activated map kinase interacting protein 1 (SAPK interacting protein 1)
YALI1_B15792g	Compare to YALI0B11946g, similar to Saccharomyces cerevisiae MDR1 (YGR100W); ancestral locus Anc_3.444, some similarities with uniprot|AAH43775 Xenopus laevis
YALI1_B15852g	Compare to YALI0B11968g, similar to uniprot|P36009 Saccharomyces cerevisiae YKL078w DHR2 Probable ATP-dependent RNA helicase (DEAH-box RNA helicase DHR2) (JA2)
YALI1_B15887g	Compare to YALI0B12034g, no similarity
YALI1_B15905g	Compare to YALI0B12056g, similar to uniprot|O59785 Schizosaccharomyces pombe Hypothetical protein
YALI1_B15928g	Compare to YALI0B12078g, similar to Saccharomyces cerevisiae MTD1 (YKR080W); ancestral locus Anc_5.673, similar to uniprot|Q02046 Saccharomyces cerevisiae YKR080W Methylenetetrahydrofolate dehydrogenase [NAD+] (EC 1.5.1.15)
YALI1_B15943g	Compare to YALI0B12100g, similar to uniprot|Q9HEH2 Neurospora crassa Related to GTPase activating protein, similar to Saccharomyces cerevisiae GYP1 (YOR070C); ancestral locus Anc_5.672
YALI1_B15964g	Compare to YALI0B12122g, weakly similar to uniprot|Q9UTS6 Schizosaccharomyces pombe Cytoplasmic dynein light chain (TCTEX-1 protein homolog), similar to Saccharomyces cerevisiae YER071C; ancestral locus Anc_7.259
YALI1_B15988g	Compare to YALI0B12144g, weakly similar to DEHA0E08173g Debaryomyces hansenii IPF 12274.1, similar to Saccharomyces cerevisiae KRE11 (YGR166W); ancestral locus Anc_5.167
YALI1_B15996g	Compare to YALI0B12166g, uniprot|Q8TG23 Yarrowia lipolytica Putative multi- protein binding factor 1, similar to Saccharomyces cerevisiae MBF1 (YOR298C-A); ancestral locus Anc_8.770
YALI1_B16022g	Compare to YALI0B12188g, weakly similar to uniprot|P12866 Saccharomyces cerevisiae YKL209c STE6 ATP-binding cassette transporter protein
YALI1_B16068g	Compare to YALI0B12210g, similar to Saccharomyces cerevisiae RNA1 (YMR235C); ancestral locus Anc_8.769, similar to uniprot|P41391 Schizosaccharomyces pombe Ran GTPase activating protein 1 (Protein rna1)
YALI1_B16087g	Compare to YALI0B12254g, weakly similar to DEHA0D18832g Debaryomyces hansenii IPF 2772.1, similar to Saccharomyces cerevisiae MUM3 (YOR298W); ancestral locus Anc_8.768
YALI1_B16110g	Compare to YALI0B12276g, similar to Saccharomyces cerevisiae MRD1 (YPR112C); ancestral locus Anc_3.432, similar to uniprot|Q06106 Saccharomyces cerevisiae YPR112C Hypothetical 101.1 kDa protein P8283.19
YALI1_B16158g	Compare to YALI0B12298g, similar to CA5393|IPF9398 Candida albicans IPF9398 unknown function
YALI1_B16194g	Compare to YALI0B12320g, similar to uniprot|Q12024 Saccharomyces cerevisiae YOR272W Microtubule-associated protein YTM1
YALI1_B16239g	Compare to YALI0B12342g, weakly similar to uniprot|P40578 Saccharomyces cerevisiae YIR033W MGA2 protein
YALI1_B16277g	Compare to YALI0B12364g, weakly similar to uniprot|Q10193 Schizosaccharomyces pombe Pre-mRNA splicing factor srp1
YALI1_B16309g	Compare to YALI0B12386g, similar to uniprot|Q871W3 Neurospora crassa B8P8. 090 Probable NADPH quinone oxidoreductase h
YALI1_B16318g	Compare to YALI0B12408g, similar to Saccharomyces cerevisiae SWA2 (YDR320C); ancestral locus Anc_5.352, weakly similar to uniprot|Q9C2A4 Neurospora crassa Conserved hypothetical protein
YALI1_B16375g	Compare to YALI0B12430g, weakly similar to uniprot|P07834 Saccharomyces cerevisiae YFL009w CDC4 cell division control protein
YALI1_B16410g	Compare to YALI0B12452g, similar to uniprot|P32776 Saccharomyces cerevisiae YDR311W RNA polymerase II transcription factor B 73 kDa subunit, similar to Saccharomyces cerevisiae TFB1 (YDR311W); ancestral locus Anc_5.336
YALI1_B16419g	Compare to YALI0B12474g, similar to uniprot|P38788 Saccharomyces cerevisiae YHR064c PDR13 regulator protein involved in pleiotropic drug resistance, similar to Saccharomyces cerevisiae SSZ1 (YHR064C); ancestral locus Anc_5.335
YALI1_B16446g	Compare to YALI0B12496g, weakly similar to uniprot|P39008 Saccharomyces cerevisiae YNR052c POP2 required for glucose derepression, similar to Saccharomyces cerevisiae POP2 (YNR052C); ancestral locus Anc_6.379
YALI1_B16477g	Compare to YALI0B12518g, similar to Saccharomyces cerevisiae VAN1 (YML115C); ancestral locus Anc_8.842, uniprot|Q8X1X9 Yarrowia lipolytica Mnn9p required for complex N-glycosylation
YALI1_B16504g	Compare to YALI0B12540g, similar to Saccharomyces cerevisiae LEE1 (YPL054W); ancestral locus Anc_8.509, weakly similar to uniprot|P41000 Schizosccharomyces pombe scp3 spindle poison sensitivity related protein
YALI1_B16544g	Compare to YALI0B12562g, similar to uniprot|P36008 Saccharomyces cerevisiae YKL081w TEF4 translation elongation factor eEF1 gamma chain
YALI1_B16584g	Compare to YALI0B12584g, similar to Saccharomyces cerevisiae EPL1 (YFL024C); ancestral locus Anc_8.47, weakly similar to uniprot|P43572 Saccharomyces cerevisiae YFL024c EPL1
YALI1_B16645g	Compare to YALI0B12606g, no similarity
YALI1_B16687g	Compare to YALI0B12628g, similar to Saccharomyces cerevisiae ELP3 (YPL086C); ancestral locus Anc_8.563, highly similar to uniprot|Q02908 Saccharomyces cerevisiae YPL086c ELP3 subunit of elongator/RNAPII holoenzyme with histone acetylase activity
YALI1_B16705g	Truncated form of YALI0B12694g, weakly similar to uniprot|P48415 Saccharomyces cerevisiae YPL085w SEC16 multidomain vesicle coat protein singleton
YALI1_B16735g	Truncated form of YALI0B12694g, weakly similar to uniprot|P48415 Saccharomyces cerevisiae YPL085w SEC16 multidomain vesicle coat protein singleton, similar to Saccharomyces cerevisiae SEC16 (YPL085W); ancestral locus Anc_8.562
YALI1_B16808g	Compare to YALI0B12716g, weakly similar to uniprot|P41546 Saccharomyces cerevisiae YFL031w HAC1 transcription factor singleton
YALI1_B16863g	Compare to YALI0B12738g, no similarity
YALI1_B16922g	Compare to YALI0B12760g, no similarity
YALI1_B16944g	Compare to YALI0B12782g, similar to Saccharomyces cerevisiae SIP5 (YMR140W); ancestral locus Anc_2.389, weakly similar to uniprot|P40210 Saccharomyces cerevisiae YMR140w similarity to probable zinc finger protein S. pombe singleton
YALI1_B16968g	Compare to YALI0B12804g, similar to uniprot|P10622 Saccharomyces cerevisiae YDL130W 60S acidic ribosomal protein P1-beta, similar to Saccharomyces cerevisiae RPP1A (YDL081C); ancestral locus Anc_2.388
YALI1_B16996g	Compare to YALI0B12826g, similar to uniprot|Q12690 Saccharomyces cerevisiae YDL082w RPL13A 60S large subunit ribosomal protein L13 or uniprot|P40212 Saccharomyces cerevisiae YMR142c RPL13B 60S large subunit ribosomal protein, similar to Saccharomyces cerevisiae RPL13A (YDL082W) and RPL13B (YMR142C); ancestral locus Anc_2.387
YALI1_B17008g	Compare to YALI0B12848g, highly similar to uniprot|P40213 Saccharomyces cerevisiae YMR143w RPS16A ribosomal protein or uniprot|P40213 Saccharomyces cerevisiae YDL083c RPS16B ribosomal protein, similar to Saccharomyces cerevisiae RPS16B (YDL083C) and RPS16A (YMR143W); ancestral locus Anc_2.386
YALI1_B17039g	Compare to YALI0B12870g, weakly similar to uniprot|P53397 Saccharomyces cerevisiae YML060w OGG1 8-oxoguanine DNA glycosylase singleton, similar to Saccharomyces cerevisiae OGG1 (YML060W); ancestral locus Anc_4.321
YALI1_B17050g	Compare to YALI0B12892g, similar to Saccharomyces cerevisiae PIF1 (YML061C); ancestral locus Anc_4.322, some similarities with uniprot|Q9UUA2 Schizosaccharomyces pombe DNA repair and recombination protein pif1 mitochondrial precursor
YALI1_B17105g	Compare to YALI0B12914g, similar to Saccharomyces cerevisiae SEC39 (YLR440C); ancestral locus Anc_4.323, weakly similar to uniprot|Q12745 Saccharomyces cerevisiae YLR440c hypothetical protein
YALI1_B17112g	Compare to YALI0B12936g, highly similar to uniprot|P53295 Saccharomyces cerevisiae YGR173w strong similarity to human GTP-binding protein P2.387.f2.1 or uniprot|P39729 Saccharomyces cerevisiae YAL036c FUN11 strong similarity to GTP-binding proteins P2.387.f2.1
YALI1_B17132g	Compare to YALI0B12958g, similar to uniprot|Q07914 Saccharomyces cerevisiae Chromosome XII reading frame ORF YLR008C
YALI1_B17155g	Compare to YALI0B12980g, similar to Saccharomyces cerevisiae PDR12 (YPL058C); ancestral locus Anc_8.517, similar to uniprot|Q96VK4 Emericella nidulans ABC transporter protein
YALI1_B17261g	Compare to YALI0B13046g, weakly similar to uniprot|P36033 Saccharomyces cerevisiae YKL220c FRE2 ferric (and cupric) reductase P9.3. f7.1 or uniprot|Q08905 Saccharomyces cerevisiae YOR381w FRE3 or uniprot|P53746 Saccharomyces cerevisiae YNR060w FRE4
YALI1_B17299t	Partial Line element
YALI1_B17363g	Compare to YALI0B13090g, weakly similar to uniprot|Q08905 Saccharomyces cerevisiae YOR381w FRE3 strong similarity to ferric reductase FRE2P P9.3.f7.1 or uniprot|P36033 Saccharomyces cerevisiae YKL220c FRE2 ferric (and cupric) reductase P9.3. f7.1 or uniprot|P53746 Saccharomyces cerevisiae YNR060w FRE4
YALI1_B17406g	Compare to YALI0B13112g, weakly similar to uniprot|P36033 Saccharomyces cerevisiae YKL220c FRE2 ferric (and cupric) reductase P9.3. f7.1 or uniprot|Q08905 Saccharomyces cerevisiae YOR381w FRE3 or uniprot|P53746 Saccharomyces cerevisiae YNR060w FRE4 or uniprot|P32791 Saccharomyces cerevisiae YLR214w FRE1 ferric (and cupric) reductase P9.3.f7.1 or uniprot|Q12473 Saccharomyces cerevisiae YLL051c FRE6 or uniprot|Q08908 Saccharomyces cerevisiae YOR384w FRE5
YALI1_B17441g	Compare to YALI0B13134g, weakly similar to uniprot|Q08905 Saccharomyces cerevisiae YOR381w FRE3 strong similarity to ferric reductase FRE2P P9.3.f7.1 or uniprot|P36033 Saccharomyces cerevisiae YKL220c FRE2 ferric (and cupric) reductase P9.3. f7.1 or uniprot|P53746 Saccharomyces cerevisiae YNR060w FRE4 or uniprot|P32791 Saccharomyces cerevisiae YLR214w FRE1 ferric (and cupric) reductase P9.3.f7.1 or uniprot|Q08908 Saccharomyces cerevisiae YOR384w FRE5 strong or uniprot|Q12473 Saccharomyces cerevisiae YLL051c FRE6
YALI1_B17493g	Compare to YALI0B13156g, uniprot|Q9HFC6 Yarrowia lipolytica Calnexin precursor involved in regulation of secretion, similar to Saccharomyces cerevisiae CNE1 (YAL058W); ancestral locus Anc_7.5
YALI1_B17518g	Compare to YALI0B13178g, similar to uniprot|P32490 Saccharomyces cerevisiae YOR231w MKK1 ser/thr protein kinase
YALI1_B17569g	Compare to YALI0B13200g, some similarities with uniprot|Q8X1W6 Aspergillus oryzae Putative transcriptional activator, similar to Saccharomyces cerevisiae YAP5 (YIR018W) and YAP7 (YOL028C); ancestral locus Anc_7.115
YALI1_B17592g	Compare to YALI0B13222g, some similarities with uniprot|P32606 Saccharomyces cerevisiae YOR017w PET127 component of mitochondrial translation system singleton, similar to Saccharomyces cerevisiae PET127 (YOR017W); ancestral locus Anc_7.111
YALI1_B17660g	Compare to YALI0B13288g, no similarity
YALI1_B17695g	Compare to YALI0B13310g, similar to uniprot|Q871Q3 Neurospora crassa B11C21. 010 Related to ECM14 protein, similar to Saccharomyces cerevisiae ECM14 (YHR132C); ancestral locus Anc_2.110
YALI1_B17724g	Compare to YALI0B13332g, weakly similar to CA5609|IPF538 Candida albicans unknown function
YALI1_B17773g	Compare to YALI0B13354g, weakly similar to uniprot|P17106 Saccharomyces cerevisiae YJR060w CBF1 kinetochore protein
YALI1_B17805g	Compare to YALI0B13376g, similar to Saccharomyces cerevisiae RAD24 (YER173W); ancestral locus Anc_8.239, some similarities with uniprot|P32641 Saccharomyces cerevisiae YER173W Checkpoint protein RAD24
YALI1_B17838g	Compare to YALI0B13398g, similar to Saccharomyces cerevisiae GRX3 (YDR098C) and GRX4 (YER174C); ancestral locus Anc_8.240, similar to uniprot|P32642 Saccharomyces cerevisiae YER174c GRX4 member of the subfamily of yeast glutaredoxins (Grx3 GRX4 and Grx5) P3.19.f3.1 or uniprot|Q03835 Saccharomyces cerevisiae YDR098c GRX3
YALI1_B17871g	Compare to YALI0B13420g, similar to Saccharomyces cerevisiae MEU1 (YLR017W); ancestral locus Anc_5.204, similar to uniprot|Q07938 Saccharomyces cerevisiae YLR017w MEU1 multiple enhancer of UAS2 singleton
YALI1_B17908g	Compare to YALI0B13442g, similar to Saccharomyces cerevisiae UTP21 (YLR409C); ancestral locus Anc_4.275, similar to uniprot|Q06078 Saccharomyces cerevisiae YLR409c strong similarity to S. pombe beta-transducin singleton
YALI1_B17927g	Truncated form of YALI0B13464g, similar to Saccharomyces cerevisiae VIP1 (YLR410W); ancestral locus Anc_4.276, similar to uniprot|Q06685 Saccharomyces cerevisiae YLR410w VIP1
YALI1_B17964g	Compare to YALI0B13486g, no similarity
YALI1_B17968g	Compare to YALI0B13508g, similar to uniprot|Q9Y812 Schizosaccharomyces pombe Probable histone H3 variant
YALI1_B17990g	Compare to YALI0B13530g, similar to uniprot|P36091 Saccharomyces cerevisiae YKL046c or uniprot|Q05031 Saccharomyces cerevisiae YMR238w DFG5 required for filamentous growth cell polarity and cellular elongation
YALI1_B18012g	Compare to YALI0B13552g, similar to Saccharomyces cerevisiae PRS1 (YKL181W); ancestral locus Anc_4.278, similar to uniprot|P32895 Saccharomyces cerevisiae YKL181w PRPS1 ribose-phosphate pyrophosphokinase P5.15.f5. 1
YALI1_B18069g	Compare to YALI0B13618g, similar to uniprot|P39719 Saccharomyces cerevisiae YAL053w FLC2 and similar to uniprot|Q08967 Saccharomyces cerevisiae YPL221W FLC1 Flavin carrier
YALI1_B18134g	Truncated form of YALI0B13640g, uniprot|P78978 Yarrowia lipolytica RIM101 protein required for ambient pH signalling mating and meiosis
YALI1_B18190g	Compare to YALI0B13662g, similar to uniprot|Q96WY0 Emericella nidulans Rho3 GTPase
YALI1_B18205g	Compare to YALI0B13684g, some similarities with uniprot|Q8X057 Neurospora crassa Conserved hypothetical, similar to Saccharomyces cerevisiae DAD1 (YDR016C); ancestral locus Anc_3.239
YALI1_B18207g	Compare to YALI0B13706g, similar to Saccharomyces cerevisiae PRP31 (YGR091W); ancestral locus Anc_3.429, similar to uniprot|O42904 Schizosaccharomyces pombe Pre- mRNA splicing factor prp31
YALI1_B18236g	Compare to YALI0B13728g, similar to CA3607|CaRTA2 Candida albicans unknown function or CA3835|CaRTA4 Protein involved in 7- aminocholesterol resistance (by homology) or CA3606|CaRTA3 unknown function or CA0401|CaRTA1 unknown function
YALI1_B18260g	Compare to YALI0B13750g, similar to uniprot|Q9W7I5 Gallus gallus Chromatin assembly factor 1 p48 subunit and uniprot|P13712 Saccharomyces cerevisiae YBR195c MSI1 chromatin assembly complex subunit p50 or uniprot|P39984 Saccharomyces cerevisiae YEL056w HAT2 subunit of the major yeast histone acetyltransferase
YALI1_B18265g	Compare to YALI0B13772g, some similarities with uniprot|Q8X0G8 Neurospora crassa Conserved hypothetical protein, similar to Saccharomyces cerevisiae MIM1 (YOL026C); ancestral locus Anc_7.119
YALI1_B18292g	Compare to YALI0B13794g, similar to uniprot|Q9P7F3 Schizosaccharomyces pombe Ammonium transporter
YALI1_B18311g	Compare to YALI0B13816g, uniprot|O74130 Yarrowia lipolytica ALK4 CYP52 family member
YALI1_B18347g	Compare to YALI0B13838g, uniprot|O74131 Yarrowia lipolytica ALK5 CYP52 family member
YALI1_B18368g	Compare to YALI0B13860g, some similarities with uniprot|Q8ITY4 Caenorhabditis elegans Hypothetical protein
YALI1_B18384g	Compare to YALI0B13882g, similar to uniprot|P39704 Saccharomyces cerevisiae YAL007c ERP2 p24 protein involved in membrane trafficking
YALI1_B18451g	Compare to YALI0B13904g, similar to uniprot|P53327 Saccharomyces cerevisiae YGR271w strong similarity to S.pombe RNA helicase or uniprot|P32639 Saccharomyces cerevisiae YER172c BRR2 RNA helicase-related protein
YALI1_B18460g	Compare to YALI0B13926g, similar to Saccharomyces cerevisiae YDR067C; ancestral locus Anc_8.186, similar to uniprot|Q12454 Saccharomyces cerevisiae Hypothetical 26.0 kDa protein YDR067C
YALI1_B18472g	Compare to YALI0B13948g, no similarity
YALI1_B18499g	Compare to YALI0B13970g, similar to uniprot|P32191 Saccharomyces cerevisiae YIL155c GUT2 glycerol-3-phosphate dehydrogenase mitochondrial, similar to Saccharomyces cerevisiae GUT2 (YIL155C); ancestral locus Anc_5.711
YALI1_B18536g	Compare to YALI0B13992g, weakly similar to uniprot|P22035 Saccharomyces cerevisiae YKR099W MYB-like DNA-binding protein BAS1, similar to Saccharomyces cerevisiae BAS1 (YKR099W); ancestral locus Anc_5.713
YALI1_B18572g	Compare to YALI0B14014g, weakly similar to uniprot|Q8NK56 Cryptococcus neoformans SMG1
YALI1_B18607g	Compare to YALI0B14036g, similar to Saccharomyces cerevisiae PAA1 (YDR071C); ancestral locus Anc_8.190, weakly similar to uniprot|Q12447 Saccharomyces cerevisiae YDR071c
YALI1_B18613g	Truncated form of YALI0B14058g, similar to uniprot|O42978 Schizosaccharomyces pombe Putative pre-mRNA splicing factor, similar to Saccharomyces cerevisiae LSM5 (YER146W); ancestral locus Anc_8.192
YALI1_B18631g	Compare to YALI0B14080g, similar to Saccharomyces cerevisiae MAG1 (YER142C); ancestral locus Anc_8.184, weakly similar to uniprot|P22134 Saccharomyces cerevisiae YER142c MAG1 3-methyladenine DNA glycosylase
YALI1_B18645g	Truncated form of YALI0B14102g, similar to Saccharomyces cerevisiae ABP1 (YCR088W); ancestral locus Anc_6.366, weakly similar to uniprot|P15891 Saccharomyces cerevisiae YCR088w ABP1 Actin binding protein
YALI1_B18687g	Compare to YALI0B14124g, some similarities with uniprot|Q08448 Saccharomyces cerevisiae Chromosome XV reading frame ORF YOR059C
YALI1_B18707g	Compare to YALI0B14146g, similar to Saccharomyces cerevisiae RPP0 (YLR340W); ancestral locus Anc_4.170, highly similar to uniprot|P05317 Saccharomyces cerevisiae YLR340w RPLA0 acidic ribosomal protein L10.e singleton
YALI1_B18727g	Compare to YALI0B14179g, some similarities with uniprot|YDR514c Saccharomyces cerevisiae YDR514c or uniprot|P25370 Saccharomyces cerevisiae YCL036w
YALI1_B18741g	Compare to YALI0B14201g, similar to uniprot|P32328 Saccharomyces cerevisiae YPR111w DBF20 cell cycle protein kinase P108.1.f3.6 or uniprot|P22204 Saccharomyces cerevisiae YGR092w DBF2 ser/thr protein kinase P108.1.f16.1
YALI1_B18764g	Compare to YALI0B14223g, similar to Saccharomyces cerevisiae GPI2 (YPL076W); ancestral locus Anc_8.545, weakly similar to uniprot|P46961 Saccharomyces cerevisiae YPL076w GPI2 N-acetylglucosaminyl- phosphatidylinositol biosynthetic protein
YALI1_B18798g	Compare to YALI0B14245g, similar to Saccharomyces cerevisiae TAF5 (YBR198C); ancestral locus Anc_8.544, similar to uniprot|P38129 Saccharomyces cerevisiae YBR198c TAF90 TFIID and SAGA subunit P29.1.f7.1
YALI1_B18811g	Compare to YALI0B14267g, similar to Saccharomyces cerevisiae PRE6 (YOL038W); ancestral locus Anc_7.120, highly similar to uniprot|P40303 Saccharomyces cerevisiae YOL038w PRE6 20S proteasome subunit (alpha4) P7. 1.f7.1
YALI1_B18845g	Compare to YALI0B14289g, similar to uniprot|P22506 Saccharomycopsis fibuligera Beta-glucosidase 1 precursor (EC 3.2.1.21)
YALI1_B18854g	Compare to YALI0B14311g, weakly similar to uniprot|P40571 Saccharomyces cerevisiae YIR015w RPR2 RNase P subunit, similar to Saccharomyces cerevisiae RPR2 (YIR015W); ancestral locus Anc_7.118
YALI1_B18887g	Compare to YALI0B14333g, similar to uniprot|P22507 Saccharomycopsis fibuligera Beta-glucosidase 2 precursor (EC 3.2.1.21)
YALI1_B18902g	Compare to YALI0B14355g, similar to uniprot|P36047 Saccharomyces cerevisiae YKL193c SDS22 regulatory subunit for the mitotic function of type I protein phosphatase singleton
YALI1_B18930g	Compare to YALI0B14377g, uniprot|Q876M0 Yarrowia lipolytica 14-3-3 protein promoting filamentous growth, similar to Saccharomyces cerevisiae BMH2 (YDR099W) and BMH1 (YER177W); ancestral locus Anc_8.243
YALI1_B18955g	Compare to YALI0B14399g, similar to uniprot|Q12740 Zalerion arboricola Pyrroline- 5-carboxylate reductase PRO3 (P5C reductase), similar to Saccharomyces cerevisiae PRO3 (YER023W); ancestral locus Anc_7.506
YALI1_B18971g	Compare to YALI0B14421g, no similarity
YALI1_B18975g	Compare to YALI0B14443g, similar to Saccharomyces cerevisiae JHD2 (YJR119C); ancestral locus Anc_7.505, some similarities with uniprot|Q9C2J9 Neurospora crassa 3H10.130 Related to regulator protein rum1
YALI1_B19021g	Compare to YALI0B14465g, similar to uniprot|P46151 Saccharomyces cerevisiae YPL023c MET12 methylenetetrahydrofolate reductase P2.74.f2. 1
YALI1_B19044g	Compare to YALI0B14487g, weakly similar to uniprot|P25293 Saccharomyces cerevisiae YKR048c NAP1 nucleosome assembly protein I, similar to Saccharomyces cerevisiae NAP1 (YKR048C); ancestral locus Anc_1.235
YALI1_B19079g	Compare to YALI0B14509g, highly similar to uniprot|Q9P842 Candida albicans S- adenosylmethionine synthetase 2 (CaSAM2), similar to Saccharomyces cerevisiae SAM2 (YDR502C) and SAM1 (YLR180W); ancestral locus Anc_1.58
YALI1_B19107g	Compare to YALI0B14531g, similar to Saccharomyces cerevisiae LPP1 (YDR503C); ancestral locus Anc_1.57, weakly similar to uniprot|Q05521 Saccharomyces cerevisiae YDR284C SIMILARITY to NADH-ubiquinone oxidoreductase chain 4
YALI1_B19120g	Compare to YALI0B14553g, similar to Saccharomyces cerevisiae MRE11 (YMR224C); ancestral locus Anc_8.744, similar to uniprot|P32829 Saccharomyces cerevisiae YMR224c MRE11 DNA repair and meiotic recombination protein singleton
YALI1_B19153g	Compare to YALI0B14575g, highly similar to uniprot|Q6C487 Yarrowia lipolytica YALI0E28853g
YALI1_B19205g	Compare to YALI0B14597g, weakly similar to uniprot|P25293 Saccharomyces cerevisiae YKR048c NAP1 nucleosome assembly protein I
YALI1_B19217g	Compare to YALI0B14619g, weakly similar to uniprot|P32528 Saccharomyces cerevisiae YBR208c DUR1_2 urea amidolyase
YALI1_B19276g	Compare to YALI0B14641g, similar to uniprot|P32454 Saccharomyces cerevisiae YKL157w APE2 aminopeptidase yscII
YALI1_B19290g	Compare to YALI0B14663g, similar to Saccharomyces cerevisiae ESS1 (YJR017C); ancestral locus Anc_5.135, similar to uniprot|O42735 Emericella nidulans Peptidyl- prolyl cis/trans isomerase
YALI1_B19323g	Compare to YALI0B14685g, weakly similar to DEHA-IPF1503.1 Debaryomyces hansenii DEHA0D08371g conserved protein
YALI1_B19336g	Compare to YALI0B14707g, similar to Saccharomyces cerevisiae YHR122W; ancestral locus Anc_2.139, highly similar to uniprot|P38829 Saccharomyces cerevisiae YHR122w similarity to hypothetical C. elegans protein F45G2.a singleton
YALI1_B19348g	Compare to YALI0B14729g, similar to Saccharomyces cerevisiae NRK1 (YNL129W); ancestral locus Anc_2.140, similar to uniprot|Q9C0W1 Schizosaccharomyces pombe Hypothetical 26.3 kDa protein
YALI1_B19388g	Compare to YALI0B14751g, similar to Saccharomyces cerevisiae KRE33 (YNL132W); ancestral locus Anc_2.136, highly similar to uniprot|P53914 Saccharomyces cerevisiae YNL132W Hypothetical 119.3 kDa protein in FPR1- TOM22 intergenic region
YALI1_B19390g	Compare to YALI0B14773g, similar to Saccharomyces cerevisiae NDT80 (YHR124W); ancestral locus Anc_2.135, weakly similar to uniprot|P38830 Saccharomyces cerevisiae YHR124W Meiosis-specific transcription factor NDT80
YALI1_B19429g	Compare to YALI0B14795g, some similarities with uniprot|P40552 Saccharomyces cerevisiae YIL011W Cell wall protein TIR3 precursor
YALI1_B19485g	Compare to YALI0B14817g, no similarity
YALI1_B19490g	Compare to YALI0B14839g, similar to Saccharomyces cerevisiae ARH1 (YDR376W); ancestral locus Anc_5.450, similar to uniprot|P48360 Saccharomyces cerevisiae YDR376w ARH1 mitochondrial protein with similarity to human adrenodoxin reductase and ferredoxin-NADP+ reductase singleton
YALI1_B19507g	Compare to YALI0B14861g, similar to uniprot|P25711 Neurospora crassa NADH- ubiquinone oxidoreductase 21 kDa subunit mitochondrial precursor
YALI1_B19520g	Compare to YALI0B14883g, weakly similar to uniprot|P38827 Saccharomyces cerevisiae YHR119W SET1 SET domain protein 1, similar to Saccharomyces cerevisiae SET1 (YHR119W); ancestral locus Anc_2.148
YALI1_B19567g	Compare to YALI0B14905g, similar to Saccharomyces cerevisiae RRP43 (YCR035C); ancestral locus Anc_1.139, similar to uniprot|Q8NKJ5 Saccharomyces cerevisiae YCR035C RRNA processing protein
YALI1_B19576g	Compare to YALI0B14927g, similar to uniprot|P25332 Saccharomyces cerevisiae YCR036w RBK1 ribokinase, similar to Saccharomyces cerevisiae RBK1 (YCR036W); ancestral locus Anc_1.138
YALI1_B19602g	Compare to YALI0B14949g, similar to uniprot|P15442 Saccharomyces cerevisiae YDR283C Protein kinase GCN2
YALI1_B19668g	Compare to YALI0B14971g, weakly similar to uniprot|O42854 Schizosaccharomyces pombe Hypothetical 170.5 kDa protein
YALI1_B19713g	Compare to YALI0B14993g, similar to Saccharomyces cerevisiae MRP51 (YPL118W); ancestral locus Anc_8.613, weakly similar to uniprot|Q02950 Saccharomyces cerevisiae YPL118w MRP51 mitochondrial ribosomal protein of the small subunit
YALI1_B19747g	Compare to YALI0B15015g, weakly similar to uniprot|O13985 Schizosaccharomyces pombe Putative chromatin assembly factor subunit WD repeat protein, similar to Saccharomyces cerevisiae CAC2 (YML102W); ancestral locus Anc_8.817
YALI1_B19774g	Compare to YALI0B15037g, similar to Saccharomyces cerevisiae YMR265C; ancestral locus Anc_8.818, some similarities with uniprot|Q9USS8 Schizosaccharomyces pombe Hypothetical 52.3 kDa
YALI1_B19844g	Compare to YALI0B15059g, uniprot|P34229 Yarrowia lipolytica Fatty acid synthase subunit beta (EC 2.3.1.86), similar to Saccharomyces cerevisiae FAS1 (YKL182W); ancestral locus Anc_4.280
YALI1_B19880g	Compare to YALI0B15081g, similar to uniprot|P41920 Saccharomyces cerevisiae YDR002W Ran-specific GTPase-activating protein 1 (Ran binding protein 1) (RANBP1) (Perinuclear array-localised- protein), similar to Saccharomyces cerevisiae YRB1 (YDR002W); ancestral locus Anc_3.204
YALI1_B19897g	Compare to YALI0B15103g, highly similar to uniprot|P0C0W9 Saccharomyces cerevisiae YPR102c RPL16A and highly similar to uniprot|Q3E757 Saccharomyces cerevisiae YGR085C RPL16B Ribosomal Protein of the Large subunit, similar to Saccharomyces cerevisiae RPL11B (YGR085C) and RPL11A (YPR102C); ancestral locus Anc_3.416
YALI1_B19932g	Compare to YALI0B15125g, highly similar to uniprot|P34760 Saccharomyces cerevisiae YML028w TSA1 thiol-specific antioxidant P3.76. f3.1, similar to Saccharomyces cerevisiae TSA2 (YDR453C) and TSA1 (YML028W); ancestral locus Anc_5.569
YALI1_B19962g	Compare to YALI0B15147g, similar to uniprot|P31384 Saccharomyces cerevisiae YAL021c CCR4 transcriptional regulator P4.26.f2.2
YALI1_B20009g	Compare to YALI0B15180g, weakly similar to uniprot|P10815 Schizosaccharomyces pombe G2/mitotic-specific cyclin cdc13
YALI1_B20043g	Compare to YALI0B15202g, similar to Saccharomyces cerevisiae HNT1 (YDL125C); ancestral locus Anc_7.287, weakly similar to CA2345|CaHNT1 Candida albicans similarity to protein kinase C inhibitor-I (by homology)
YALI1_B20052g	Compare to YALI0B15224g, similar to Saccharomyces cerevisiae PRE2 (YPR103W); ancestral locus Anc_3.417, highly similar to uniprot|P30656 Saccharomyces cerevisiae YPR103W Proteasome component PRE2 precursor (EC 3.4.25.1)
YALI1_B20094g	Truncated form of YALI0B15246g, weakly similar to uniprot|O14270 Schizosaccharomyces pombe Putative forkhead-related transcription factor C1142.08, similar to Saccharomyces cerevisiae FHL1 (YPR104C); ancestral locus Anc_3.418
YALI1_B20108g	Compare to YALI0B15268g, similar to uniprot|Q07551 Saccharomyces cerevisiae Chromosome IV reading frame ORF YDL124W similarity to aldose reductases P6.5.f6.1
YALI1_B20130g	Compare to YALI0B15290g, similar to Saccharomyces cerevisiae HSV2 (YGR223C); ancestral locus Anc_5.105, similar to DEHA0C07898g Debaryomyces hansenii IPF 1990.1
YALI1_B20153g	Compare to YALI0B15304g, similar to Saccharomyces cerevisiae ADE4 (YMR300C); ancestral locus Anc_5.21, similar to uniprot|P04046 Saccharomyces cerevisiae YMR300c ADE4 amidophosphoribosyltransferase
YALI1_B20188g	Compare to YALI0B15312g, similar to uniprot|P53863 Saccharomyces cerevisiae YNL227c similarity to dnaJ-like proteins P10.5.f2.1
YALI1_B20192g	Compare to YALI0B15334g, similar to Saccharomyces cerevisiae SNF8 (YPL002C); ancestral locus Anc_8.89, weakly similar to uniprot|Q12483 Saccharomyces cerevisiae YPL002c SNF8 involved in glucose derepression singleton
YALI1_B20205g	Compare to YALI0B15356g, some similarities with uniprot|P34078 Saccharomyces cerevisiae YKL143w LTV1 low-temperature viability protein singleton
YALI1_B20242g	Compare to YALI0B15378g, weakly similar to uniprot|P09798 Saccharomyces cerevisiae YKL022c CDC16 subunit of anaphase-promoting complex (cyclosome), similar to Saccharomyces cerevisiae CDC16 (YKL022C); ancestral locus Anc_2.665
YALI1_B20243g	Compare to YALI0B15400g, similar to uniprot|O94443 Schizosaccharomyces pombe Putative exonuclease
YALI1_B20276g	Compare to YALI0B15422g, no similarity
YALI1_B20289g	Compare to YALI0B15444g, similar to Saccharomyces cerevisiae LYS1 (YIR034C); ancestral locus Anc_2.664, uniprot|P38997 Yarrowia lipolytica Saccharopine dehydrogenase
YALI1_B20319g	Compare to YALI0B15466g, similar to uniprot|Q6C860 Yarrowia lipolytica YALI0D22462g
YALI1_B20337g	Compare to YALI0B15488g, weakly similar to uniprot|Q872Z4 Neurospora crassa B23B10.030 Related to monocarboxylate transporter
YALI1_B20378g	Compare to YALI0B15510g, similar to uniprot|P32623 Saccharomyces cerevisiae YEL040w UTR2 cell wall protein P3.82.f3.1
YALI1_B20399g	Compare to YALI0B15532g, no similarity
YALI1_B20407g	Compare to YALI0B15554g, no similarity
YALI1_B20416g	Compare to YALI0B15576g, similar to Saccharomyces cerevisiae RTT107 (YHR154W); ancestral locus Anc_5.94, weakly similar to uniprot|Q9P5J5 Neurospora crassa Conserved hypothetical protein
YALI1_B20462g	Compare to YALI0B15598g, similar to Saccharomyces cerevisiae GND2 (YGR256W) and GND1 (YHR183W); ancestral locus Anc_5.55, highly similar to uniprot|P38720 Saccharomyces cerevisiae YHR183w GND1 6-phosphogluconate dehydrogenase P2.360.f2.1 or uniprot|P53319 Saccharomyces cerevisiae YGR256w GND2 phosphogluconate dehydrogenase P2.360.f2.1
YALI1_B20493g	Compare to YALI0B15620g, no similarity
YALI1_B20521g	Compare to YALI0B15642g, similar to Saccharomyces cerevisiae PRP43 (YGL120C); ancestral locus Anc_6.132, highly similar to uniprot|P53131 Saccharomyces cerevisiae YGL120c PRP43 involved in spliceosome disassembly P7.5.f7.1
YALI1_B20527g	Compare to YALI0B15664g, similar to Saccharomyces cerevisiae ABC1 (YGL119W); ancestral locus Anc_6.133, similar to uniprot|P27697 Saccharomyces cerevisiae YGL119w ABC1 ubiquinol--cytochrome-c reductase complex assembly protein singleton
YALI1_B20577g	Compare to YALI0B15686g, similar to Saccharomyces cerevisiae RGD2 (YFL047W); ancestral locus Anc_8.4, weakly similar to uniprot|Q09697 Schizosaccharomyces pombe Hypothetical protein
YALI1_B20589g	Compare to YALI0B15708g, similar to Saccharomyces cerevisiae GCD6 (YDR211W); ancestral locus Anc_8.420, similar to uniprot|P32501 Saccharomyces cerevisiae YDR211w GCD6 translation initiation factor eIF2b epsilon 81 kDa subunit
YALI1_B20634g	Truncated form of YALI0B15722g, similar to Saccharomyces cerevisiae SKN7 (YHR206W) and HMS2 (YJR147W); ancestral locus Anc_4.385, weakly similar to uniprot|O59892 Candida albicans Histidine kinase 1
YALI1_B20717g	Compare to YALI0B15752g, uniprot|Q9P8U2 Yarrowia lipolytica CDC42 GTP- binding protein of RAS superfamily
YALI1_B20730g	Compare to YALI0B15774g, highly similar to uniprot|P12612 Saccharomyces cerevisiae YDR212w CCT1 component of chaperonin-containing T-complex P10.3.f8.1, similar to Saccharomyces cerevisiae TCP1 (YDR212W); ancestral locus Anc_8.422
YALI1_B20765g	Converted to coding from non-coding YALI0B15796g, similar to uniprot|Q6CGT3 Yarrowia lipolytica YALI0A16423g
YALI1_B20777g	Compare to YALI0B15818g, some similarities with uniprot|Q05958 Saccharomyces cerevisiae YDR213W Hypothetical 100.3 kDa protein YD8142, similar to Saccharomyces cerevisiae UPC2 (YDR213W) and ECM22 (YLR228C); ancestral locus Anc_8.423
YALI1_B20802g	Compare to YALI0B15840g, similar to uniprot|Q12449 Saccharomyces cerevisiae YDR214W Hypothetical 39.4 kDa protein, similar to Saccharomyces cerevisiae AHA1 (YDR214W); ancestral locus Anc_8.424
YALI1_B20834g	Compare to YALI0B15862g, similar to Saccharomyces cerevisiae VPS72 (YDR485C); ancestral locus Anc_3.100, weakly similar to uniprot|O93994 Candida albicans Conserved hypothetical protein
YALI1_B20835g	Compare to YALI0B15884g, similar to Saccharomyces cerevisiae COQ3 (YOL096C); ancestral locus Anc_3.99, similar to uniprot|O93995 Candida albicans CaCOQ3 Hexaprenyldihydroxybenzoate methyltransferase mitochondrial precursor
YALI1_B20870g	Compare to YALI0B15906g, similar to uniprot|P08018 Saccharomyces cerevisiae YJL128c PBS2 tyrosine protein kinase of the MAP kinase kinase family P108.1.f2.4
YALI1_B20919g	Compare to YALI0B15950g, similar to Saccharomyces cerevisiae YBR204C; ancestral locus Anc_8.524, similar to CA2278|IPF10806 Candida albicans unknown function
YALI1_B20935g	Compare to YALI0B15972g, similar to Saccharomyces cerevisiae YJL132W; ancestral locus Anc_1.221, weakly similar to uniprot|P47014 Saccharomyces cerevisiae YJL132w weak similarity to human phospholipase D singleton
YALI1_B20968g	Compare to YALI0B15994g, no similarity
YALI1_B20992g	Compare to YALI0B16016g, no similarity
YALI1_B21004g	Compare to YALI0B16038g, similar to uniprot|P07277 Saccharomyces cerevisiae YMR208w ERG12 mevalonate kinase singleton, similar to Saccharomyces cerevisiae ERG12 (YMR208W); ancestral locus Anc_8.719
YALI1_B21030g	Compare to YALI0B16060g, similar to uniprot|Q12029 Saccharomyces cerevisiae Chromosome XV reading frame ORF YOR271C, similar to Saccharomyces cerevisiae YOR271C; ancestral locus Anc_8.720
YALI1_B21042g	Compare to YALI0B16082g, no similarity
YALI1_B21070g	Compare to YALI0B16104g, similar to Saccharomyces cerevisiae GUA1 (YMR217W); ancestral locus Anc_8.733, highly similar to uniprot|P38625 Saccharomyces cerevisiae YMR217w GUA1 GMP synthase (glutamine- hydrolyzing) singleton
YALI1_B21088g	Compare to YALI0B16126g, similar to Saccharomyces cerevisiae RAM2 (YKL019W); ancestral locus Anc_2.661, similar to uniprot|P29703 Saccharomyces cerevisiae YKL019w RAM2 protein farnesyltransferase alpha subunit P2. 311.f2.1
YALI1_B21104g	Compare to YALI0B16148g, no similarity
YALI1_B21114g	Compare to YALI0B16170g, weakly similar to uniprot|Q6C860 Yarrowia lipolytica YALI0D22462g
YALI1_B21134g	Compare to YALI0B16192g, similar to uniprot|P87219 Candida albicans Sorbitol utilization protein SOU1 or uniprot|P87218 Candida albicans Sorbitol utilization protein SOU2
YALI1_B21155g	Compare to YALI0B16214g, similar to uniprot|P25379 Saccharomyces cerevisiae YCL064c CHA1 L-serine/L-threonine deaminase P3.118.f2.1
YALI1_B21194g	Compare to YALI0B16236g, similar to Saccharomyces cerevisiae PPN1 (YDR452W); ancestral locus Anc_5.568, weakly similar to uniprot|Q04119 Saccharomyces cerevisiae YDR452W D9461.37P
YALI1_B21208g	Compare to YALI0B16258g, similar to Saccharomyces cerevisiae RET1 (YOR207C); ancestral locus Anc_8.619, highly similar to uniprot|P22276 Saccharomyces cerevisiae YOR207c RPC128 DNA-directed RNA polymerase III 130 KD subunit P3.7.f3.1
YALI1_B21250g	Compare to YALI0B16280g, similar to uniprot|Q9UV33 Ascobolus immersus Histone H1, similar to Saccharomyces cerevisiae HHO1 (YPL127C); ancestral locus Anc_8.629
YALI1_B21275g	Compare to YALI0B16302g, no similarity
YALI1_B21313g	Compare to YALI0B16324g, similar to uniprot|Q8NJ48 ericoid mycorrhizal Putative chitin synthase
YALI1_B21323g	Compare to YALI0B16368g, highly similar to uniprot|P52917 Saccharomyces cerevisiae YPR173C Vacuolar protein sorting-associated protein VPS4 (END13 protein)
YALI1_B21356g	Compare to YALI0B16390g, similar to Saccharomyces cerevisiae ARG2 (YJL071W); ancestral locus Anc_1.301, weakly similar to uniprot|P40360 Saccharomyces cerevisiae YJL071w ARG2 acetylglutamate synthase
YALI1_B21381g	Compare to YALI0B16412g, similar to uniprot|P40445 Saccharomyces cerevisiae YIL166c similarity to allantoate permease DAL5P P10.2.f5.1
YALI1_B21423g	Compare to YALI0B16434g, similar to Saccharomyces cerevisiae STT3 (YGL022W); ancestral locus Anc_4.98, similar to uniprot|P39007 Saccharomyces cerevisiae YGL022w STT3 oligosaccharyl transferase subunit singleton
YALI1_B21432g	Compare to YALI0B16456g, no similarity
YALI1_B21466g	Compare to YALI0B16478g, similar to Saccharomyces cerevisiae YHR078W; ancestral locus Anc_5.365, weakly similar to uniprot|P38799 Saccharomyces cerevisiae YHR078w hypothetical protein singleton
YALI1_B21493g	Compare to YALI0B16500g, similar to uniprot|P09232 Saccharomyces cerevisiae YEL060c PRB1 protease B vacuolar P3.40.f3.1
YALI1_B21538g	Compare to YALI0B16522g, similar to uniprot|P19145 Saccharomyces cerevisiae YKR039w GAP1 general amino acid permease
YALI1_B21562g	Compare to YALI0B16544g, similar to uniprot|P53091 Saccharomyces cerevisiae YGL201c MCM6 involved in replication P6.3.f6.1
YALI1_B21594g	Compare to YALI0B16566g, similar to uniprot|P38331 Saccharomyces cerevisiae YBR242w conserved protein of unknown function, similar to Saccharomyces cerevisiae YBR242W and YGL101W; ancestral locus Anc_6.157
YALI1_B21618g	Compare to YALI0B16588g, similar to uniprot|P07286 Saccharomyces cerevisiae YBR243c ALG7 UDP-N-acetylglucosamine-1-phosphate transferase, similar to Saccharomyces cerevisiae ALG7 (YBR243C); ancestral locus Anc_6.158
YALI1_B21628g	Compare to YALI0B16610g, similar to uniprot|P53011 Saccharomyces cerevisiae YGL100w SEH1 nuclear pore protein P2.255.f2.1, similar to Saccharomyces cerevisiae SEH1 (YGL100W); ancestral locus Anc_6.159
YALI1_B21675g	Compare to YALI0B16632g, no similarity
YALI1_B21714g	Compare to YALI0B16654g, similar to Saccharomyces cerevisiae NSA1 (YGL111W); ancestral locus Anc_6.144, weakly similar to CA1770|IPF12457 Candida albicans unknown function
YALI1_B21737g	Compare to YALI0B16676g, no similarity
YALI1_B21774g	Compare to YALI0B16698g, similar to uniprot|Q9HE24 Neurospora crassa Related to 26S proteasome-associated ubiquitin carboxyl-terminal hydrolase, similar to Saccharomyces cerevisiae YUH1 (YJR099W); ancestral locus Anc_7.470
YALI1_B21787g	Compare to YALI0B16720g, similar to uniprot|P47140 Saccharomyces cerevisiae YJR100c weak similarity to BUD3P singleton, similar to Saccharomyces cerevisiae YJR100C; ancestral locus Anc_7.472
YALI1_B21798g	Compare to YALI0B16742g, weakly similar to uniprot|P47141 Saccharomyces cerevisiae YJR101w RSM26 weak similarity to superoxide dismutases singleton, similar to Saccharomyces cerevisiae RSM26 (YJR101W); ancestral locus Anc_7.473
YALI1_B21816g	Compare to YALI0B16764g, no similarity
YALI1_B21819g	Compare to YALI0B16786g, similar to Saccharomyces cerevisiae VPS25 (YJR102C); ancestral locus Anc_7.474, weakly similar to ca|CA1636 Candida albicans IPF20086 unknown function
YALI1_B21855g	Compare to YALI0B16808g, similar to Saccharomyces cerevisiae REG1 (YDR028C) and REG2 (YBR050C); ancestral locus Anc_3.258, similar to uniprot|Q00816 Saccharomyces cerevisiae YDR028c REG1 regulatory subunit for protein phosphatase GLC7P singleton
YALI1_B21885g	Compare to YALI0B16822g, similar to uniprot|Q8X0Y3 Neurospora crassa Conserved hypothetical protein, similar to Saccharomyces cerevisiae VPS54 (YDR027C); ancestral locus Anc_3.257
YALI1_B21935g	Compare to YALI0B16852g, similar to DEHA0B12474g Debaryomyces hansenii IPF 10115.1
YALI1_B21966g	Compare to YALI0B16874g, no similarity, similar to Saccharomyces cerevisiae YLL007C; ancestral locus Anc_5.209
YALI1_B22015g	Compare to YALI0B16896g, similar to Saccharomyces cerevisiae DRS1 (YLL008W); ancestral locus Anc_5.208, similar to uniprot|P32892 Saccharomyces cerevisiae YLL008w DRS1 RNA helicase of the DEAD box family P28.1.f22. 1
YALI1_B22020g	Compare to YALI0B16918g, weakly similar to uniprot|P38630 Saccharomyces cerevisiae YOR217w RFC1 DNA replication factor C 95 KD subunit
YALI1_B22055g	Compare to YALI0B16940g, weakly similar to CAGL0L01683g Candida glabrata CAGL-IPF7423.1
YALI1_B22060g	Compare to YALI0B16962g, similar to Saccharomyces cerevisiae EMI1 (YDR512C); ancestral locus Anc_1.41, no similarity
YALI1_B22088g	Compare to YALI0B16984g, weakly similar to uniprot|P01120 Saccharomyces cerevisiae YNL098c RAS2 GTP-binding protein P24.2.f4.3 or uniprot|P01119 Saccharomyces cerevisiae YOR101w RAS1 GTP- binding protein P24.2.f4.3
YALI1_B22109g	Compare to YALI0B17006g, some similarities with CA4429|CaDBF4 Candida albicans regulatory subunit for Cdc7 by homology, similar to Saccharomyces cerevisiae DBF4 (YDR052C); ancestral locus Anc_3.299
YALI1_B22158g	Compare to YALI0B17028g, weakly similar to uniprot|Q8XQP2 Ralstonia solanacearum Putative hemagglutinin/hemolysin-related protein
YALI1_B22259g	Compare to YALI0B17050g, similar to Saccharomyces cerevisiae IDS2 (YJL146W); ancestral locus Anc_1.204, weakly similar to uniprot|Q947G8 Lycopersicon esculentum GOLS-1 Galactinol synthase (EC 2.4.1.123)
YALI1_B22266g	Compare to YALI0B17061g, gnl|GLV|YALI0B17061g [Yarrowia lipolytica] weakly similar to uniprot|Q4I964 Fusarium graminearum Hypothetical protein, similar to Saccharomyces cerevisiae MDY2 (YOL111C); ancestral locus Anc_3.65
YALI1_B22276g	Compare to YALI0B17072g, weakly similar to uniprot|P38237 Saccharomyces cerevisiae YBR058c UBP14 ubiquitin specific protease
YALI1_B22321g	Compare to YALI0B17138g, similar to uniprot|Q9P702 Neurospora crassa Probable sugar transporter
YALI1_B22351g	Compare to YALI0B17160g, similar to Saccharomyces cerevisiae MUM2 (YBR057C); ancestral locus Anc_3.269, some similarities with uniprot|P38236 Saccharomyces cerevisiae YBR057c MUM2 meiotic protein
YALI1_B22372g	Compare to YALI0B17182g, no similarity
YALI1_B22375g	Compare to YALI0B17204g, similar to Saccharomyces cerevisiae ERG2 (YMR202W); ancestral locus Anc_6.300, similar to uniprot|P32352 Saccharomyces cerevisiae YMR202w ERG2 C-8 sterol isomerase singleton
YALI1_B22410g	Compare to YALI0B17226g, similar to Saccharomyces cerevisiae DIE2 (YGR227W); ancestral locus Anc_5.101, weakly similar to uniprot|P50076 Saccharomyces cerevisiae YGR227w DIE2 ITR1 expression promoting protein singleton
YALI1_B22414g	Compare to YALI0B17248g, weakly similar to DEHA0B14531g Debaryomyces hansenii IPF 533.1, similar to Saccharomyces cerevisiae YHR151C; ancestral locus Anc_5.102
YALI1_B22452g	Compare to YALI0B17270g, weakly similar to uniprot|Q96VQ3 Saccharomyces cerevisiae YGR225W Ama1p (Fragment), similar to Saccharomyces cerevisiae AMA1 (YGR225W); ancestral locus Anc_5.104
YALI1_B22499g	Compare to YALI0B17292g, weakly similar to uniprot|Q12209 Saccharomyces cerevisiae Chromosome XII reading frame ORF YLR047C
YALI1_B22512g	Compare to YALI0B17303g, similar to Saccharomyces cerevisiae DAD3 (YBR233W-A); ancestral locus Anc_6.142,gnl|GLV|YALI0B17303g [Yarrowia lipolytica] weakly similar to uniprot|P69850 Saccharomyces cerevisia YBR233W-A DAD3 Pi similarity to Z. rouxii involved in kinetochore function
YALI1_B22533g	Compare to YALI0B17314g, similar to Saccharomyces cerevisiae ATP11 (YNL315C); ancestral locus Anc_3.30, similar to uniprot|P32453 Saccharomyces cerevisiae YNL315c ATP11 F1F0-ATPase complex assembly protein singleton
YALI1_B22549g	Compare to YALI0B17336g, similar to Saccharomyces cerevisiae PHA2 (YNL316C); ancestral locus Anc_3.29, similar to uniprot|P32452 Saccharomyces cerevisiae YNL316c PHA2 prephenate dehydratase singleton
YALI1_B22561g	Compare to YALI0B17358g, similar to uniprot|Q23457 Caenorhabditis elegans ZK287.5 protein or uniprot|Q8WSQ1 Caenorhabditis elegans RING-H2 finger protein Rbx1, similar to Saccharomyces cerevisiae HRT1 (YOL133W); ancestral locus Anc_3.28
YALI1_B22598g	Compare to YALI0B17380g, similar to uniprot|P38328 Saccharomyces cerevisiae YBR234c ARC40 ARP2/3 protein complex subunit 40 kilodalton, similar to Saccharomyces cerevisiae ARC40 (YBR234C); ancestral locus Anc_6.143
YALI1_B22614g	Compare to YALI0B17402g, similar to Saccharomyces cerevisiae ADE13 (YLR359W); ancestral locus Anc_4.197, highly similar to uniprot|Q05911 Saccharomyces cerevisiae YLR359w ADE13 adenylosuccinate lyase
YALI1_B22638g	Compare to YALI0B17424g, similar to Saccharomyces cerevisiae MED7 (YOL135C); ancestral locus Anc_3.27, similar to uniprot|Q08278 Saccharomyces cerevisiae YOL135c MED7 member of RNA Polymerase II transcriptional regulation mediator complex singleton
YALI1_B22645g	Compare to YALI0B17446g, no similarity
YALI1_B22667g	Compare to YALI0B17468g, no similarity
YALI1_B22677g	Compare to YALI0B17490g, similar to Saccharomyces cerevisiae ERV15 (YBR210W) and ERV14 (YGL054C); ancestral locus Anc_6.102, similar to uniprot|P53173 Saccharomyces cerevisiae YGL054c ERV14 ER-derived Vesicles
YALI1_B22697g	Compare to YALI0B17512g, similar to Saccharomyces cerevisiae SEC62 (YPL094C); ancestral locus Anc_8.572, uniprot|Q99161 Yarrowia lipolytica ER protein- translocation complex Sec62p subunit
YALI1_B22721g	Compare to YALI0B17534g, similar to Saccharomyces cerevisiae MTQ1 (YNL063W); ancestral locus Anc_2.245, similar to uniprot|P53944 Saccharomyces cerevisiae YNL063w
YALI1_B22747g	Compare to YALI0B17556g, weakly similar to uniprot|Q9Y898 Emericella nidulans Calcium/calmodulin dependent protein kinase C
YALI1_B22793g	Compare to YALI0B17622g, highly similar to uniprot|P32599 Saccharomyces cerevisiae YDR129c SAC6 actin filament bundling protein fimbrin singleton, similar to Saccharomyces cerevisiae SAC6 (YDR129C); ancestral locus Anc_8.290
YALI1_B22820g	Compare to YALI0B17644g, similar to Saccharomyces cerevisiae ERG27 (YLR100W); ancestral locus Anc_8.289, similar to uniprot|Q12452 Saccharomyces cerevisiae ORF YLR100W ERG27 3-keto sterol reductase singleton
YALI1_B22853g	Compare to YALI0B17666g, similar to uniprot|Q01217 Saccharomyces cerevisiae YER069w ARG5_6 acetylglutamate kinase and acetylglutamyl- phosphate reductase, similar to Saccharomyces cerevisiae ARG5,6 (YER069W); ancestral locus Anc_7.251
YALI1_B22883g	Compare to YALI0B17688g, similar to Saccharomyces cerevisiae TSC10 (YBR265W); ancestral locus Anc_1.315, weakly similar to uniprot|Q9Y7P2 Schizosaccharomyces pombe Putative short-chain dehydrogenase and uniprot|P38342 Saccharomyces cerevisiae YBR265w TSC10 3-ketosphinganine reductase singleton
YALI1_B22905g	Compare to YALI0B17710g, no similarity
YALI1_B22908g	Compare to YALI0B17732g, similar to Saccharomyces cerevisiae MRPL8 (YJL063C); ancestral locus Anc_1.313, weakly similar to uniprot|O94345 Schizosaccharomyces pombe Putative mitochondrial ribosomal protein and uniprot|P22353 Saccharomyces cerevisiae YJL063c MRPL8 ribosomal protein L17 mitochondrial
YALI1_B22938g	Compare to YALI0B17754g, similar to Saccharomyces cerevisiae YMR259C; ancestral locus Anc_8.811, weakly similar to uniprot|Q03496 Saccharomyces cerevisiae YMR259c
YALI1_B23017g	Compare to YALI0B17776g, similar to KLLA0D12606g Kluyveromyces lactis IPF 4552.1
YALI1_B23055g	Compare to YALI0B17798g, similar to Saccharomyces cerevisiae PAC11 (YDR488C); ancestral locus Anc_3.95, similar to uniprot|Q8X179 Emericella nidulans Cytoplasmic dynein intermediate chain
YALI1_B23061g	Compare to YALI0B17820g, similar to Saccharomyces cerevisiae SLD5 (YDR489W); ancestral locus Anc_3.94, uniprot|Q6CE80 Yarrowia lipolytica YALI0B17820g thermosensitive suppressor of 7SRNA defect
YALI1_B23077g	Compare to YALI0B17842g, weakly similar to wi|NCU08632.1 Neurospora crassa NCU08632.1 hypothetical protein, similar to Saccharomyces cerevisiae YOL138C; ancestral locus Anc_3.22
YALI1_B23153g	Compare to YALI0B17864g, similar to uniprot|Q9P851 Debaryomyces occidentalis High- affinity potassium uptake transporter, similar to Saccharomyces cerevisiae TRK1 (YJL129C) and TRK2 (YKR050W); ancestral locus Anc_1.224
YALI1_B23176g	Compare to YALI0B17886g, similar to uniprot|Q9P7C5 Schizosaccharomyces pombe Cell cycle control protein cwf16
YALI1_B23201g	Compare to YALI0B17908g, weakly similar to uniprot|Q6CBL4 Yarrowia lipolytica YALI0C17589g
YALI1_B23237g	Compare to YALI0B17930g, similar to uniprot|Q12325 Saccharomyces cerevisiae YLR092w SEL2 sulfate transporter P4.33.f3.1 or uniprot|P38359 Saccharomyces cerevisiae YBR294w SUL1 high- affinity sulfate transport protein P4.33.f3.1
YALI1_B23300g	Compare to YALI0B17996g, similar to uniprot|Q9UR03 Candida albicans Endo-1 3- beta -glucanase
YALI1_B23338g	Compare to YALI0B18018g, similar to Saccharomyces cerevisiae TBF1 (YPL128C); ancestral locus Anc_8.630, weakly similar to uniprot|O42961 Schizosaccharomyces pombe Hypothetical 54.6 kDa protein C19G7.13 in chromosome II and uniprot|Q02457 Saccharomyces cerevisiae YPL128c TBF1 telomere TTAGGG repeat-binding factor 1 singleton
YALI1_B23351g	Compare to YALI0B18040g, similar to uniprot|P36095 Saccharomyces cerevisiae YKL041w VPS24 endosomal Vps protein complex subunit singleton, similar to Saccharomyces cerevisiae VPS24 (YKL041W); ancestral locus Anc_2.558
YALI1_B23373g	Compare to YALI0B18062g, similar to uniprot|P35189 Saccharomyces cerevisiae YPL129w ANC1 TFIIF subunit (transcription initiation factor) 30 kD P2.59.f2.1, similar to Saccharomyces cerevisiae YAF9 (YNL107W); ancestral locus Anc_2.170
YALI1_B23385g	Compare to YALI0B18084g, no similarity
YALI1_B23420g	Compare to YALI0B18128g, similar to uniprot|Q08237 Saccharomyces cerevisiae ORF YOL080C REX4
YALI1_B23440g	Compare to YALI0B18150g, similar to uniprot|P53224 Saccharomyces cerevisiae YGR038W ORM1 protein, similar to Saccharomyces cerevisiae ORM1 (YGR038W) and ORM2 (YLR350W); ancestral locus Anc_4.182
YALI1_B23467g	Compare to YALI0B18172g, no similarity
YALI1_B23522g	Truncated form of YALI0B18194g, similar to uniprot|Q6CCA1 Yarrowia lipolytica YALI0C11165g
YALI1_B23579g	Compare to YALI0B18216g, no similarity
YALI1_B23609g	Compare to YALI0B18238g, similar to Saccharomyces cerevisiae BUD31 (YCR063W); ancestral locus Anc_6.330, similar to uniprot|Q962X9 Branchiostoma belcheri G10 protein
YALI1_B23622g	Compare to YALI0B18260g, weakly similar to uniprot|Q09906 Schizosaccharomyces pombe Hypothetical protein, similar to Saccharomyces cerevisiae YKR051W; ancestral locus Anc_1.220
YALI1_B23708g	Compare to YALI0B18282g, similar to uniprot|O14367 Schizosaccharomyces pombe Gluconate transport inducer 1
YALI1_B23771g	Compare to YALI0B18298g, gnl|GLV|YALI0B18298g [Yarrowia lipolytica] similar to uniprot|P38636 Saccharomyces cerevisiae YNL259c ATX1 antioxidant protein and metal homeostasis factor, similar to Saccharomyces cerevisiae ATX1 (YNL259C); ancestral locus Anc_1.98
YALI1_B23794g	Compare to YALI0B18304g, similar to uniprot|O14096 Schizosaccharomyces pombe queuine tRNA-ribosyltransferase-like protein
YALI1_B23798g	Compare to YALI0B18326g, similar to Saccharomyces cerevisiae NOP16 (YER002W); ancestral locus Anc_7.146, similar to uniprot|P40007 Saccharomyces cerevisiae YER002w
YALI1_B23834g	Compare to YALI0B18348g, similar to Saccharomyces cerevisiae PMI40 (YER003C); ancestral locus Anc_7.147, similar to uniprot|P29952 Saccharomyces cerevisiae YER003c PMI40 mannose-6-phosphate isomerase
YALI1_B23866g	Compare to YALI0B18370g, no similarity
YALI1_B23879g	Compare to YALI0B18392g, no similarity
YALI1_B23933g	Compare to YALI0B18414g, weakly similar to uniprot|Q8BH76 Mus musculus DNA polymerase delta subunit 3
YALI1_B23939g	Compare to YALI0B18436g, similar to Saccharomyces cerevisiae TAD1 (YGL243W); ancestral locus Anc_3.566, weakly similar to uniprot|P53065 Saccharomyces cerevisiae YGL243w TAD1 tRNA-specific adenosine deaminase 1
YALI1_B23966g	Compare to YALI0B18458g, similar to Saccharomyces cerevisiae YGL242C; ancestral locus Anc_3.565, weakly similar to uniprot|P53066 Saccharomyces cerevisiae YGL242c weak similarity to Drosophila ANK protein singleton
YALI1_B23981g	Compare to YALI0B18480g, similar to Saccharomyces cerevisiae KAP114 (YGL241W); ancestral locus Anc_3.564, weakly similar to uniprot|P53067 Saccharomyces cerevisiae YGL241w KAP114 Member of the karyopherin-beta family nuclear import
YALI1_B24018g	Compare to YALI0B18502g, weakly similar to uniprot|Q9C0W5 Schizosaccharomyces pombe Hypothetical 17.7 kDa protein
YALI1_B24043g	Compare to YALI0B18524g, similar to Saccharomyces cerevisiae CUE3 (YGL110C); ancestral locus Anc_6.145, some similarities with uniprot|P53137 Saccharomyces cerevisiae YGL110C Hypothetical 72.0 kDa protein in TAF60- MLC1 intergenic region
YALI1_B24051g	Compare to YALI0B18546g, similar to Saccharomyces cerevisiae YOR021C; ancestral locus Anc_5.605, similar to uniprot|Q871G1 Neurospora crassa Hypothetical protein B7H23.200
YALI1_B24185g	Compare to YALI0B18568g, similar to uniprot|Q6C5E4 Yarrowia lipolytica YALI0E18766g
YALI1_B24214g	Compare to YALI0B18590g, similar to uniprot|Q8TB37 Homo sapiens Hypothetical protein, similar to Saccharomyces cerevisiae CFD1 (YIL003W); ancestral locus Anc_7.136
YALI1_B24218g	Compare to YALI0B18612g, similar to uniprot|P32559 Saccharomyces cerevisiae YMR023c MSS1 mitochondrial GTPase involved in expression of COX1 singleton, similar to Saccharomyces cerevisiae MSS1 (YMR023C); ancestral locus Anc_2.573
YALI1_B24252g	Compare to YALI0B18634g, weakly similar to uniprot|Q12234 Saccharomyces cerevisiae Chromosome XV reading frame ORF YOR216C RUD3 suppressor of USO1-1 transport defect P37.1.f4.1, similar to Saccharomyces cerevisiae RUD3 (YOR216C); ancestral locus Anc_8.636
YALI1_B24264g	Compare to YALI0B18656g, some similarities with uniprot|P41544 Saccharomyces cerevisiae YJL004c SYS1 multi copy suppressor of YPT6 singleton, similar to Saccharomyces cerevisiae SYS1 (YJL004C); ancestral locus Anc_5.207
YALI1_B24280g	Compare to YALI0B18678g, no similarity
YALI1_B24292g	Compare to YALI0B18700g, similar to uniprot|Q8TG13 Neurospora crassa Casein kinase II alpha subunit CKA
YALI1_B24335g	Compare to YALI0B18722g, similar to uniprot|P38132 Saccharomyces cerevisiae YBR202w CDC47 cell division control protein P6.3.f6.1
YALI1_B24351g	Compare to YALI0B18744g, no similarity
YALI1_B24424g	Compare to YALI0B18759g, similar to Saccharomyces cerevisiae CYR1 (YJL005W); ancestral locus Anc_5.206, weakly similar to uniprot|P08678 Saccharomyces cerevisiae YJL005w CYR1 adenylate cyclase
YALI1_B24471g	Compare to YALI0B18788g, weakly similar to uniprot|Q9V3L5 Drosophila melanogaster RAB4 protein
YALI1_B24502g	Truncated form of YALI0B18810g, weakly similar to uniprot|Q03690 Saccharomyces cerevisiae YMR012w CLU1 translation initiation factor eIF3, similar to Saccharomyces cerevisiae CLU1 (YMR012W); ancestral locus Anc_2.559
YALI1_B24564g	Compare to YALI0B18854g, weakly similar to uniprot|Q03649 Saccharomyces cerevisiae YMR210w Putative acyltransferase, similar to Saccharomyces cerevisiae EHT1 (YBR177C) and EEB1 (YPL095C); ancestral locus Anc_8.574
YALI1_B24606g	Compare to YALI0B18876g, similar to uniprot|Q02883 Saccharomyces cerevisiae YPL103C LPG6P, similar to Saccharomyces cerevisiae YPL103C; ancestral locus Anc_8.582
YALI1_B24638g	Compare to YALI0B18898g, similar to Saccharomyces cerevisiae ECM31 (YBR176W); ancestral locus Anc_8.583, similar to uniprot|Q9Y7B6 Emericella nidulans 3- methyl-2- oxobutanoate hydroxymethyltransferase (EC 2.1.2. 11) (Ketopantoate hydroxymethyltransferase)
YALI1_B24654g	Compare to YALI0B18920g, some similarities with wi|NCU03528.1 Neurospora crassa NCU03528.1 hypothetical protein (38260 - 37462)
YALI1_B24672g	Compare to YALI0B18942g, weakly similar to uniprot|Q6CGT3 Yarrowia lipolytica YALI0A16423g
YALI1_B24758g	Compare to YALI0B18964g, no similarity
YALI1_B24836g	Compare to YALI0B18986g, similar to uniprot|Q9C101 Schizosaccharomyces pombe Putative membrane transporter
YALI1_B24901g	Compare to YALI0B19008g, similar to uniprot|Q9C101 Schizosaccharomyces pombe Putative membrane transporter
YALI1_B24936g	Compare to YALI0B19030g, similar to CA5047|IPF4504 Candida albicans unknown function
YALI1_B24997g	Compare to YALI0B19052g, weakly similar to uniprot|P32525 Saccharomyces cerevisiae YJL201w ECM25 involved in cell wall biogenesis and architecture singleton, similar to Saccharomyces cerevisiae ECM25 (YJL201W); ancestral locus Anc_1.133
YALI1_B25017g	Compare to YALI0B19074g, uniprot|O93954 Yarrowia lipolytica Sls2 protein synthetic lethal with 7SL RNA conditional mutation, similar to Saccharomyces cerevisiae RCY1 (YJL204C); ancestral locus Anc_1.131
YALI1_B25062g	Compare to YALI0B19096g, weakly similar to CA2780|IPF3831 Candida albicans unknown function
YALI1_B25087g	Compare to YALI0B19118g, no similarity
YALI1_B25107g	Compare to YALI0B19162g, similar to uniprot|O94021 Candida albicans Hypothetical 48.1 kDa protein
YALI1_B25136g	Compare to YALI0B19184g, some similarities with wi|NCU07850.1 Neurospora crassa NCU07850.1 hypothetical protein
YALI1_B25187g	Compare to YALI0B19206g, similar to uniprot|P24871 Saccharomyces cerevisiae YLR210w CLB4 cyclin G2/M-specific P6.2.f6.1
YALI1_B25223g	Compare to YALI0B19228g, no similarity
YALI1_B25258g	Compare to YALI0B19250g, weakly similar to uniprot|P38731 Saccharomyces cerevisiae YHL040c ARN1 ferrichrome-type siderophore transporter
YALI1_B25313g	Compare to YALI0B19316g, similar to uniprot|P09230 Yarrowia lipolytica Alkaline extracellular protease precursor (EC 3.4.21.-) (AEP)
YALI1_B25360g	Compare to YALI0B19338g, similar to uniprot|P04817 Saccharomyces cerevisiae YEL063c CAN1 amino acid permease
YALI1_B25395g	Compare to YALI0B19360g, similar to uniprot|O59791 Schizosaccharomyces pombe Hypothetical protein C320.14 in chromosome III
YALI1_B25427g	Truncated form of YALI0B19382g, similar to uniprot|P43098 Candida albicans Fatty acid synthase subunit alpha (EC 2.3.1.86)
YALI1_B25484g	Compare to YALI0B19448g, no similarity
YALI1_B25506g	Compare to YALI0B19470g, similar to uniprot|P36035 Saccharomyces cerevisiae YKL217w JEN1 carboxylic acid transporter protein singleton
YALI1_B25553g	Compare to YALI0B19492g, similar to uniprot|P19145 Saccharomyces cerevisiae YKR039w Gap1 general amino acid permease
YALI1_B25593g	Compare to YALI0B19558g, similar to uniprot|Q12009 Saccharomyces cerevisiae YDL201w strong similarity to probable methyltransferase related protein Neurospora crassa singleton, similar to Saccharomyces cerevisiae TRM8 (YDL201W); ancestral locus Anc_8.448
YALI1_B25603g	Compare to YALI0B19580g, similar to Saccharomyces cerevisiae YOL057W; ancestral locus Anc_3.171, similar to uniprot|Q08225 Saccharomyces cerevisiae YOL057W Probable dipeptidyl-peptidase III (EC 3.4.14.4)
YALI1_B25676g	Compare to YALI0B19602g, similar to Saccharomyces cerevisiae PHD1 (YKL043W) and SOK2 (YMR016C); ancestral locus Anc_2.564, similar to uniprot|Q9Y7W9 Yarrowia lipolytica Mycelial growth factor-1
YALI1_B25734g	Compare to YALI0B19624g, similar to Saccharomyces cerevisiae PEX3 (YDR329C); ancestral locus Anc_5.372, similar to uniprot|Q874C0 Yarrowia lipolytica Pex3p
YALI1_B25744g	Compare to YALI0B19646g, similar to Saccharomyces cerevisiae MBA1 (YBR185C); ancestral locus Anc_8.561, weakly similar to uniprot|P38300 Saccharomyces cerevisiae YBR185c MBA1 respiratory chain assembly protein singleton
YALI1_B25762g	Compare to YALI0B19668g, similar to uniprot|Q12402 Saccharomyces cerevisiae YPR028w YIP2 protein or Ypt Interacting Protein regulates vesicular traffic in stressed cells either to facilitate membrane turnover or to decrease unnecessary secretion, similar to Saccharomyces cerevisiae YOP1 (YPR028W); ancestral locus Anc_7.434
YALI1_B25795g	Compare to YALI0B19712g, similar to Saccharomyces cerevisiae PEF1 (YGR058W); ancestral locus Anc_4.203, similar to wi|NCU02738.1 Neurospora crassa NCU02738. 1 hypothetical protein
YALI1_B25798g	Compare to YALI0B19734g, similar to Saccharomyces cerevisiae YKL033W; ancestral locus Anc_2.541, weakly similar to uniprot|P36097 Saccharomyces cerevisiae YKL033w similarity to hypothetical protein S. pombe singleton
YALI1_B25833g	Compare to YALI0B19756g, no similarity
YALI1_B25868g	Compare to YALI0B19778g, no similarity
YALI1_B25906g	Compare to YALI0B19800g, similar to uniprot|P19145 Saccharomyces cerevisiae YKR039W General amino-acid permease GAP1
YALI1_B25952g	Compare to YALI0B19844g, no similarity
YALI1_B25963g	Compare to YALI0B19866g, no similarity
YALI1_B25988g	Compare to YALI0B19888g, no similarity
YALI1_B25997g	Compare to YALI0B19910g, similar to Saccharomyces cerevisiae DIA2 (YOR080W); ancestral locus Anc_5.689, no similarity
YALI1_B26033g	Compare to YALI0B19976g, highly similar to uniprot|O93968 Candida boidinii Formate dehydrogenase (EC 1.2.1.2)
YALI1_B26112g	Truncated form of YALI0B19998g, similar to uniprot|Q12680 Saccharomyces cerevisiae YDL171c GLT1 glutamate synthase (NAPDPH) (GOGAT, similar to Saccharomyces cerevisiae GLT1 (YDL171C); ancestral locus Anc_7.361
YALI1_B26153g	Compare to YALI0B20020g, highly similar to uniprot|P14843 Saccharomyces cerevisiae YDR035w ARO3 2-dehydro-3-deoxyphosphoheptonate aldolase phenylalanine-inhibited P2.438.f2.1
YALI1_B26175g	Compare to YALI0B20042g, no similarity
YALI1_B26205g	Compare to YALI0B20064g, weakly similar to uniprot|P53388 Saccharomyces cerevisiae YPL265w DIP5 dicarboxylic amino acid permease P23.1.f18.1
YALI1_B26235g	Compare to YALI0B20086g, similar to Saccharomyces cerevisiae MRP1 (YDR347W); ancestral locus Anc_5.398, weakly similar to uniprot|P10662 Saccharomyces cerevisiae YDR347W Mitochondrial 40S ribosomal protein MRP1
YALI1_B26271g	Compare to YALI0B20108g, similar to Saccharomyces cerevisiae YDR348C and YHR097C; ancestral locus Anc_5.399, weakly similar to uniprot|Q05518 Saccharomyces cerevisiae YDR348C hypothetical protein
YALI1_B26322g	Compare to YALI0B20174g, similar to uniprot|Q12303 Saccharomyces cerevisiae YLR121c YPS3 GPI-anchored aspartyl protease 3 (yapsin 3) P8.5.f5.1, similar to Saccharomyces cerevisiae YPS7 (YDR349C); ancestral locus Anc_5.401
YALI1_B26350g	Compare to YALI0B20196g, similar to uniprot|P25358 Saccharomyces cerevisiae YCR034w GNS1 fatty acid elongase required for sphingolipid formation, similar to Saccharomyces cerevisiae SUR4 (YLR372W); ancestral locus Anc_4.220
YALI1_B26430g	Compare to YALI0B20218g, similar to uniprot|Q9Y7U6 Schizosaccharomyces pombe Rho1 gdp-gtp exchange protein 1, similar to Saccharomyces cerevisiae ROM1 (YGR070W) and ROM2 (YLR371W); ancestral locus Anc_4.219
YALI1_B26451g	Compare to YALI0B20240g, highly similar to uniprot|Q05933 Saccharomyces cerevisiae YLR370C ARP2/3 complex 21 kDa subunit, similar to Saccharomyces cerevisiae ARC18 (YLR370C); ancestral locus Anc_4.218
YALI1_B26517g	Compare to YALI0B20262g, similar to Saccharomyces cerevisiae SNT1 (YCR033W); ancestral locus Anc_1.141, some similarities with uniprot|P25357 Saccharomyces cerevisiae YCR033w similarity to nuclear receptor co- repressor N-Cor singleton
YALI1_B26550g	Compare to YALI0B20284g, weakly similar to uniprot|Q6C189 Yarrowia lipolytica YALI0F18326g
YALI1_B26596g	Compare to YALI0B20306g, uniprot|Q9C1F8 Yarrowia lipolytica Pir1 covalently- linked cell wall protein
YALI1_B26639g	Compare to YALI0B20328g, similar to uniprot|P39979 Saccharomyces cerevisiae YEL066w HPA3 histone and other protein acetyltransferase
YALI1_B26659g	Compare to YALI0B20350g, weakly similar to uniprot|Q9P8F7 Yarrowia lipolytica Triacylglycerol lipase precursor (EC 3.1.1.3)
YALI1_B26679g	Compare to YALI0B20372g, uniprot|Q9UVT9 Yarrowia lipolytica NADH:ubiquinone oxidoreductase 51 kDa subunit nucleotide-binding subunit of NADH:ubiquinone oxidoreductase
YALI1_B26715g	Compare to YALI0B20394g, similar to Saccharomyces cerevisiae YER078C; ancestral locus Anc_7.268, similar to uniprot|P40051 Saccharomyces cerevisiae YER078c similarity to E.coli X-Pro aminopeptidase II P2. 410.f2.1
YALI1_B26728g	Compare to YALI0B20416g, similar to uniprot|O94524 Schizosaccharomyces pombe Protein with glutathione S transferase domain
YALI1_B26749g	Compare to YALI0B20438g, similar to Saccharomyces cerevisiae SER2 (YGR208W); ancestral locus Anc_5.125, similar to uniprot|P42941 Saccharomyces cerevisiae YGR208W Phosphoserine phosphatase (EC 3.1.3.3)
YALI1_B26763g	Compare to YALI0B20460g, similar to uniprot|Q9USP9 Schizosaccharomyces pombe Hypothetical coiled-coil protein with RNA recognition motif
YALI1_B26790g	Compare to YALI0B20482g, highly similar to uniprot|P50085 Saccharomyces cerevisiae YGR231c PHB2 Prohibitin P2.384.f2.1
YALI1_B26808g	Compare to YALI0B20504g, similar to Saccharomyces cerevisiae RPS19B (YNL302C) and RPS19A (YOL121C); ancestral locus Anc_3.51, similar to uniprot|P07280 Saccharomyces cerevisiae YOL121c RP55A 40S small subunit ribosomal protein S19 or uniprot|P07281 Saccharomyces cerevisiae YNL302c RP55B 40S small subunit ribosomal protein S19
YALI1_B26845g	Compare to YALI0B20526g, similar to uniprot|Q00663 Candida tropicalis Candidapepsin precursor (EC 3.4.23.24)
YALI1_B26874g	Converted to coding from non-coding YALI0B20548g, highly similar to uniprot|Q6C9E1 Yarrowia lipolytica YALI0D11924g
YALI1_B26888g	similar to Saccharomyces cerevisiae BNS1 (YGR230W) and SPO12 (YHR152W); ancestral locus Anc_5.99
YALI1_B26926g	Compare to YALI0B20570g, similar to Saccharomyces cerevisiae SMI1 (YGR229C); ancestral locus Anc_5.100, weakly similar to uniprot|P38678 Neurospora crassa Glucan synthase-1 (EC 2.4.1.34)
YALI1_B26962g	Compare to YALI0B20592g, weakly similar to uniprot|P38770 Saccharomyces cerevisiae YHR036w
YALI1_B26963g	Compare to YALI0B20614g, no similarity
YALI1_B26984g	Compare to YALI0B20636g, weakly similar to uniprot|Q89QU1 Bradyrhizobium japonicum Bll3033 protein
YALI1_B27009g	Compare to YALI0B20658g, similar to Saccharomyces cerevisiae DOM34 (YNL001W) and YCL001W-B; ancestral locus Anc_1.418, weakly similar to uniprot|P33309 Saccharomyces cerevisiae YNL001w DOM34 functions in protein translation to promote G1 progression and differentiation
YALI1_B27015g	Compare to YALI0B20680g, similar to uniprot|O13939 Schizosaccharomyces pombe Probable beta-adaptin clatharin assembly protein, similar to Saccharomyces cerevisiae APL6 (YGR261C); ancestral locus Anc_5.45
YALI1_B27057g	Compare to YALI0B20702g, similar to uniprot|O74128 Yarrowia lipolytica ALK2
YALI1_B27102g	Compare to YALI0B20724g, similar to uniprot|Q10178 Schizosaccharomyces pombe U2 snRNP component prp10, similar to Saccharomyces cerevisiae HSH155 (YMR288W); ancestral locus Anc_5.46
YALI1_B27110g	Truncated form of YALI0B20746g, similar to Saccharomyces cerevisiae GPI16 (YHR188C); ancestral locus Anc_5.47, similar to uniprot|P38875 Saccharomyces cerevisiae YHR188c
YALI1_B27123g	Truncated form of YALI0B20746g, similar to Saccharomyces cerevisiae GPI16 (YHR188C); ancestral locus Anc_5.47, similar to uniprot|P38875 Saccharomyces cerevisiae YHR188c
YALI1_B27144g	Compare to YALI0B20768g, similar to DEHA0A00979g Debaryomyces hansenii IPF 65.1
YALI1_B27150g	Compare to YALI0B20790g, no similarity
YALI1_B27179g	Compare to YALI0B20812g, similar to uniprot|P00729 Saccharomyces cerevisiae YMR297w PRC1 carboxypeptidase y serine-type protease P3.65. f3.1
YALI1_B27211g	Compare to YALI0B20834g, some similarities with uniprot|P39955 Saccharomyces cerevisiae YER047c SAP1 member of the AAA-protein family P21.1.f17.1
YALI1_B27254g	Compare to YALI0B20856g, similar to Saccharomyces cerevisiae TIM50 (YPL063W); ancestral locus Anc_8.527, similar to KLLA0E23188g Kluyveromyces lactis IPF 2470.1
YALI1_B27280g	Compare to YALI0B20878g, weakly similar to uniprot|Q12270 Saccharomyces cerevisiae Chromosome XVI reading frame ORF YPL246C, similar to Saccharomyces cerevisiae RBD2 (YPL246C); ancestral locus Anc_6.274
YALI1_B27293g	Compare to YALI0B20900g, similar to Saccharomyces cerevisiae YAR1 (YPL239W); ancestral locus Anc_6.265, similar to uniprot|P46683 Saccharomyces cerevisiae YPL239W Ankyrin repeat-containing protein YAR1
YALI1_B27307g	Compare to YALI0B20911g, gnl|GLV|YALI0B20911g [Yarrowia lipolytica] similar to uniprot|P21734 Saccharomyces cerevisiae YDR177w Ubiquitin-conjugating enzyme (Ubiquitin- protein ligase)
YALI1_B27320g	Compare to YALI0B20922g, highly similar to uniprot|P47943 Schizosaccharomyces pombe Eukaryotic initiation factor 4A (eIF-4A) (eIF4A)
YALI1_B27360g	Compare to YALI0B20944g, similar to Saccharomyces cerevisiae UPC2 (YDR213W) and ECM22 (YLR228C); ancestral locus Anc_8.423, no similarity
YALI1_B27399g	Compare to YALI0B20966g, similar to uniprot|Q07549 Saccharomyces cerevisiae YDL123W
YALI1_B27404g	Compare to YALI0B20988g, similar to Saccharomyces cerevisiae BRR1 (YPR057W); ancestral locus Anc_3.347, weakly similar to uniprot|Q9N405 Caenorhabditis elegans Hypothetical protein Y39A3CR.1
YALI1_B27429g	Compare to YALI0B21010g, similar to ca|CA4956|IPF4583 Candida albicans putative allantoate permease (by homology)
YALI1_B27454g	Compare to YALI0B21032g, similar to Saccharomyces cerevisiae PRP21 (YJL203W); ancestral locus Anc_1.132, similar to uniprot|Q8C128 Mus musculus Splicing factor 3 subunit 1
YALI1_B27460g	Compare to YALI0B21054g, weakly similar to uniprot|Q8VCG3 Mus musculus Hypothetical protein
YALI1_B27485g	Compare to YALI0B21076g, similar to Saccharomyces cerevisiae RPL28 (YGL103W); ancestral locus Anc_6.156, highly similar to uniprot|P02406 Saccharomyces cerevisiae YGL103w CYH2 60S large subunit ribosomal protein L27a
YALI1_B27500g	Compare to YALI0B21098g, similar to Saccharomyces cerevisiae TPA1 (YER049W); ancestral locus Anc_7.220, similar to uniprot|P40032 Saccharomyces cerevisiae YER049W Hypothetical 74.0 kDa protein in CAJ1-HOM3 intergenic region
YALI1_B27534g	Compare to YALI0B21120g, similar to uniprot|P40531 Saccharomyces cerevisiae YIL041W 36.7 kDa protein in CBR5-NOT3 intergenic region, similar to Saccharomyces cerevisiae GVP36 (YIL041W); ancestral locus Anc_7.221
YALI1_B27564g	Compare to YALI0B21142g, similar to KLLA0E03729g Kluyveromyces lactis IPF 3594.1
YALI1_B27570g	Compare to YALI0B21164g, weakly similar to uniprot|Q10321 Schizosaccharomyces pombe, similar to Saccharomyces cerevisiae SHG1 (YBR258C); ancestral locus Anc_1.345
YALI1_B27588g	Compare to YALI0B21186g, similar to uniprot|P37302 Saccharomyces cerevisiae YBR286w APE3 vacuolar aminopeptidase Y singleton
YALI1_B27637g	Compare to YALI0B21208g, some similarities with CA3044|IPF7298 Candida albicans unknown function
YALI1_B27645g	Compare to YALI0B21230g, similar to uniprot|Q8J289 Kluyveromyces lactis YGL104C similarity to glucose transport protein
YALI1_B27662g	Compare to YALI0B21252g, similar to uniprot|P10622 Saccharomyces cerevisiae YDL130w RPLA3 60S large subunit acidic ribosomal protein L44, similar to Saccharomyces cerevisiae RPP1A (YDL081C); ancestral locus Anc_2.388
YALI1_B27685g	Compare to YALI0B21274g, no similarity
YALI1_B27689g	Compare to YALI0B21296g, no similarity
YALI1_B27723g	Compare to YALI0B21318g, similar to uniprot|Q6CHS1 Yarrowia lipolytica YALI0A05665g
YALI1_B27777g	Compare to YALI0B21340g, similar to uniprot|Q9C2C8 Neurospora crassa Probable gamma-adaptin, similar to Saccharomyces cerevisiae APL4 (YPR029C); ancestral locus Anc_7.435
YALI1_B27805g	Compare to YALI0B21362g, some similarities with DEHA0F16852g Debaryomyces hansenii IPF 7784.1, similar to Saccharomyces cerevisiae YPR063C; ancestral locus Anc_3.352
YALI1_B27837g	Compare to YALI0B21384g, similar to Saccharomyces cerevisiae BIK1 (YCL029C); ancestral locus Anc_1.46, weakly similar to uniprot|O42184 Gallus gallus Restin (Cytoplasmic linker protein-170) (CLIP-170)
YALI1_B27857g	Compare to YALI0B21406g, similar to DEHA0F08206g Debaryomyces hansenii IPF 8485.1
YALI1_B27874g	Compare to YALI0B21428g, similar to Saccharomyces cerevisiae GFA1 (YKL104C) and YMR085W; ancestral locus Anc_2.477, highly similar to uniprot|P14742 Saccharomyces cerevisiae YKL104C Glucosamine--fructose-6-phosphate aminotransferase
YALI1_B27929g	Compare to YALI0B21450g, similar to uniprot|Q12127 Saccharomyces cerevisiae YLR110c strong similarity to FLO1P
YALI1_B27968g	Compare to YALI0B21472g, similar to DEHA0D20493g Debaryomyces hansenii IPF 2653.1
YALI1_B27984g	Compare to YALI0B21494g, some similarities with ca|CA1652|CaRNH1.exon1 Candida albicans Ribonuclease H
YALI1_B28017g	Compare to YALI0B21516g, similar to uniprot|P53759 Saccharomyces cerevisiae YML080w similarity to A.brasilense nifR3 protein P3.77.f3. 1, similar to Saccharomyces cerevisiae DUS1 (YML080W); ancestral locus Anc_4.350
YALI1_B28025g	Compare to YALI0B21527g, similar to Saccharomyces cerevisiae ATP20 (YPR020W); ancestral locus Anc_8.123,gnl|GLV|YALI0B21527g [Yarrowia lipolytica] weakly similar to uniprot|Q12233 Saccharomyces cerevisiae YPR020w ATPN_YEAST ATP synthase G chain mitochondrial
YALI1_B28053g	Compare to YALI0B21538g, similar to Saccharomyces cerevisiae ROK1 (YGL171W); ancestral locus Anc_8.124, similar to uniprot|P45818 Saccharomyces cerevisiae YGL171w ROK1 ATP-dependent RNA helicase P28.1.f22.1
YALI1_B28098g	Compare to YALI0B21560g, weakly similar to uniprot|P35735 Saccharomyces cerevisiae YKL051w, similar to Saccharomyces cerevisiae SFK1 (YKL051W); ancestral locus Anc_2.589
YALI1_B28150g	Compare to YALI0B21582g, similar to Saccharomyces cerevisiae MSN4 (YKL062W) and MSN2 (YMR037C); ancestral locus Anc_2.598, uniprot|Q9Y791 Yarrowia lipolytica C2H2-type zinc finger protein Mhy1p required for dimorphic transition
YALI1_B28215g	Compare to YALI0B21604g, similar to uniprot|P23500 Saccharomyces cerevisiae YKR052C MRS4 and similar to uniprot|P10566 Saccharomyces cerevisiae YJL133W MRS3 Mitochondrial RNA splicing protein
YALI1_B28268g	Compare to YALI0B21626g, weakly similar to CAGL0K10648g Candida glabrata IPF 3232.1, similar to Saccharomyces cerevisiae YFR016C; ancestral locus Anc_1.377
YALI1_B28292g	Compare to YALI0B21662g, weakly similar to uniprot|P06105 Saccharomyces cerevisiae YJL080c SCP160 required for maintenance of exact ploidy, similar to Saccharomyces cerevisiae SCP160 (YJL080C); ancestral locus Anc_1.290
YALI1_B28349g	Compare to YALI0B21670g, similar to uniprot|P53839 Saccharomyces cerevisiae YNL274c related to glycerate- and formate-dehydrogenases
YALI1_B28357g	Compare to YALI0B21692g, weakly similar to uniprot|Q9LFS7 Arabidopsis thaliana Hypothetical 38.2 kDa protein
YALI1_B28374g	Compare to YALI0B21714g, no similarity
YALI1_B28394g	Compare to YALI0B21780g, similar to uniprot|P14065 Saccharomyces cerevisiae YOR120w GCY1 galactose-induced protein of aldo/keto reductase family
YALI1_B28430g	Compare to YALI0B21824g, weakly similar to uniprot|Q9UW95 Aspergillus parasiticus Cytochrome P450 monooxygenase
YALI1_B28454g	Compare to YALI0B21846g, similar to uniprot|Q00415 Coccidioides immitis 4- hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (4HPPD) (HPD) (HPPDase)
YALI1_B28472g	Compare to YALI0B21868g, weakly similar to uniprot|Q20683 Caenorhabditis elegans F52H3.5 protein
YALI1_B28499g	Compare to YALI0B21890g, weakly similar to DEHA0E09339g Debaryomyces hansenii IPF 12176.1
YALI1_B28511g	Compare to YALI0B21912g, no similarity
YALI1_B28572g	Compare to YALI0B21978g, similar to Saccharomyces cerevisiae IFM1 (YOL023W); ancestral locus Anc_1.364, weakly similar to uniprot|P25038 Saccharomyces cerevisiae YOL023w IFM1 translation initiation factor 2 mitochondrial
YALI1_B28584g	Compare to YALI0B22000g, no similarity
YALI1_B28659g	Compare to YALI0B22066g, highly similar to uniprot|P05030 Saccharomyces cerevisiae YGL008c PMA1 H+-transporting P-type ATPase major isoform plasma membrane
YALI1_B28735g	Compare to YALI0B22088g, some similarities with uniprot|P22470 Saccharomyces cerevisiae YDR143c SAN1 mating-type regulation protein
YALI1_B28744g	Truncated form of YALI0B22110g, similar to uniprot|Q12446 Saccharomyces cerevisiae YOR181w LAS17 component of actin cortical patches, similar to Saccharomyces cerevisiae LAS17 (YOR181W); ancestral locus Anc_6.81
YALI1_B28781g	Compare to YALI0B22125g, gnl|GLV|YALI0B22125g [Yarrowia lipolytica] similar to pir|S72200 uniprot|Q3E764 Saccharomyces cerevisiae hypothetical protein YLR262c-a
YALI1_B28789g	Compare to YALI0B22132g, weakly similar to uniprot|Q8X095 Neurospora crassa Conserved hypothetical protein, similar to Saccharomyces cerevisiae WSS1 (YHR134W); ancestral locus Anc_2.107
YALI1_B28830g	Compare to YALI0B22154g, similar to uniprot|P17608 Schizosaccharomyces pombe GTP- binding protein ryh1
YALI1_B28933g	Compare to YALI0B22176g, weakly similar to uniprot|Q12132 Saccharomyces cerevisiae YPL230w USV1 putative transcription factor
YALI1_B29008g	Compare to YALI0B22198g, some similarities with uniprot|P53438 Saccharomyces cerevisiae YMR016c SOK2 regulatory protein in the PKA signal transduction pathway
YALI1_B29037g	Compare to YALI0B22220g, no similarity
YALI1_B29051g	Compare to YALI0B22242g, similar to Saccharomyces cerevisiae RAD1 (YPL022W); ancestral locus Anc_8.473, weakly similar to uniprot|P06777 Saccharomyces cerevisiae YPL022w RAD1 component of the nucleotide excision repairosome
YALI1_B29080g	Compare to YALI0B22264g, weakly similar to uniprot|Q9UST8 Schizosaccharomyces pombe Ribonuclease H (EC 3.1.26.4) (RNase H)
YALI1_B29108g	Compare to YALI0B22286g, similar to uniprot|Q06103 Saccharomyces cerevisiae YPR108w RPN7 subunit of the regulatory particle of the proteasome, similar to Saccharomyces cerevisiae RPN7 (YPR108W); ancestral locus Anc_3.423
YALI1_B29133g	Truncated form of YALI0B22308g, uniprot|O74996 Yarrowia lipolytica Hexokinase
YALI1_B29153g	Compare to YALI0B22330g, weakly similar to uniprot|Q10414 Schizosaccharomyces pombe Hypothetical protein C1F3.09 in chromosome I, similar to Saccharomyces cerevisiae YGR093W; ancestral locus Anc_3.431
YALI1_B29191g	Compare to YALI0B22374g, similar to Saccharomyces cerevisiae RTG2 (YGL252C); ancestral locus Anc_3.579, similar to uniprot|P32608 Saccharomyces cerevisiae YGL252C Retrograde regulation protein 2
YALI1_B29202g	Compare to YALI0B22396g, similar to Saccharomyces cerevisiae TRS23 (YDR246W); ancestral locus Anc_8.476, highly similar to uniprot|Q9P3N1 Neurospora crassa
YALI1_B29227g	Compare to YALI0B22418g, no similarity
YALI1_B29243g	Compare to YALI0B22440g, similar to uniprot|Q9SK84 Arabidopsis thaliana Putative phospho-2-dehydro-3-deoxyheptonate aldolase 1
YALI1_B29266g	Compare to YALI0B22462g, no similarity
YALI1_B29310g	Truncated form of YALI0B22484g, weakly similar to DEHA0D11924g Debaryomyces hansenii IPF 1187.1, similar to Saccharomyces cerevisiae YLR422W; ancestral locus Anc_4.296
YALI1_B29419g	Compare to YALI0B22506g, highly similar to uniprot|Q9Y790 Mycosphaerella graminicola NAD-dependent formate dehydrogenase (EC 1.2.1. 2)
YALI1_B29446g	Compare to YALI0B22528g, weakly similar to uniprot|O14098 Schizosaccharomyces pombe Putative serine/threonine protein kinase
YALI1_B29483g	Compare to YALI0B22550g, similar to uniprot|Q9P3J2 Neurospora crassa NCU05419.1 related to hydroxymethylglutaryl-CoA lyase
YALI1_B29505g	Compare to YALI0B22572g, similar to uniprot|P53734 Saccharomyces cerevisiae YNR038W ATP-dependent RNA helicase DBP6 (DEAD-box protein 6, similar to Saccharomyces cerevisiae DBP6 (YNR038W); ancestral locus Anc_6.355
YALI1_B29507g	Compare to YALI0B22594g, similar to Saccharomyces cerevisiae RSM19 (YNR037C); ancestral locus Anc_6.354, similar to uniprot|P53733 Saccharomyces cerevisiae YNR037C Probable mitochondrial ribosomal protein S19
YALI1_B29528g	Compare to YALI0B22616g, similar to uniprot|O14156 Schizosaccharomyces pombe Protein phosphatase 2C homolog 4 (EC 3.1.3.16) (PP2C-4), similar to Saccharomyces cerevisiae PTC6 (YCR079W); ancestral locus Anc_6.353
YALI1_B29539g	Compare to YALI0B22638g, highly similar to uniprot|P50623 Saccharomyces cerevisiae YDL064w UBC9 E2 ubiquitin-conjugating enzyme, similar to Saccharomyces cerevisiae UBC9 (YDL064W); ancestral locus Anc_4.249
YALI1_B29548g	Compare to YALI0B22660g, uniprot|Q96W74 Yarrowia lipolytica Peroxin required for biogenesis of peroxisomes, similar to Saccharomyces cerevisiae PEX19 (YDL065C); ancestral locus Anc_4.250
YALI1_B29562g	Compare to YALI0B22682g, similar to uniprot|Q06708 Saccharomyces cerevisiae YLR386w VAC14 Activator of Fab1p, similar to Saccharomyces cerevisiae VAC14 (YLR386W); ancestral locus Anc_4.242
YALI1_B29637g	Compare to YALI0B22704g, no similarity
YALI1_B29662g	Compare to YALI0B22726g, similar to Saccharomyces cerevisiae TRS130 (YMR218C); ancestral locus Anc_8.735, weakly similar to uniprot|Q03660 Saccharomyces cerevisiae YMR218c TRS130 TRAPP subunit of 130 kDa involved in targeting and fusion of ER
YALI1_B29711g	Compare to YALI0B22748g, no similarity
YALI1_B29718g	Compare to YALI0B22770g, similar to Saccharomyces cerevisiae YOR305W; ancestral locus Anc_8.782, no similarity
YALI1_B29742g	Compare to YALI0B22792g, weakly similar to uniprot|P48566 Saccharomyces cerevisiae YNL293w MSB3, similar to Saccharomyces cerevisiae MSB3 (YNL293W) and MSB4 (YOL112W); ancestral locus Anc_3.64
YALI1_B29753g	Compare to YALI0B22814g, similar to Saccharomyces cerevisiae RIM21 (YNL294C); ancestral locus Anc_3.63, weakly similar to uniprot|Q9P904 Emericella nidulans PalH
YALI1_B29779g	Compare to YALI0B22836g, some similarities with uniprot|Q9P7H5 Schizosaccharomyces pombe Hypothetical 19.8 kDa protein
YALI1_B29785g	Compare to YALI0B22858g, similar to Saccharomyces cerevisiae MON2 (YNL297C); ancestral locus Anc_3.61, weakly similar to uniprot|P48563 Saccharomyces cerevisiae YNL297c MON2 similarity to S.pombe hypothetical protein SPAC23D3.13c singleton
YALI1_B29844g	Compare to YALI0B22880g, similar to uniprot|P09230 Yarrowia lipolytica Alkaline extracellular protease precursor (EC 3.4.21.-) (AEP)
YALI1_B29867g	Compare to YALI0B22902g, similar to uniprot|Q05979 Saccharomyces cerevisiae YLR231c Probable kynureninase (EC 3.7.1.3) (L-kynurenine hydrolase, similar to Saccharomyces cerevisiae BNA5 (YLR231C); ancestral locus Anc_8.417
YALI1_B29883g	Compare to YALI0B22924g, similar to uniprot|P47119 Saccharomyces cerevisiae YJR069c HAM1 controls 6-N-hydroxylaminopurine sensitivity and mutagenesis, similar to Saccharomyces cerevisiae HAM1 (YJR069C); ancestral locus Anc_1.520
YALI1_B29895g	Compare to YALI0B22946g, similar to uniprot|Q8TG40 Candida albicans Hemoglobin and proliferation regulated protein, similar to Saccharomyces cerevisiae FAP7 (YDL166C); ancestral locus Anc_7.348
YALI1_B29905g	Truncated form of YALI0B22968g, similar to uniprot|P87240 Schizosaccharomyces pombe Hypothetical protein, similar to Saccharomyces cerevisiae CDC36 (YDL165W); ancestral locus Anc_7.347
YALI1_B29915g	Compare to YALI0B22990g, weakly similar to uniprot|P09230 Yarrowia lipolytica Alkaline extracellular protease precursor (EC 3. 4.21.-) (AEP)
YALI1_B29941g	Compare to YALI0B23012g, no similarity
YALI1_B29972g	Compare to YALI0B23034g, weakly similar to uniprot|O94459 Schizosaccharomyces pombe Hypothetical protein
YALI1_B29977g	Compare to YALI0B23056g, similar to Saccharomyces cerevisiae SPT15 (YER148W); ancestral locus Anc_8.197, highly similar to uniprot|P17871 Schizosaccharomyces pombe Transcription initiation factor TFIID (TATA-box factor) (TATA sequence-binding protein) (TBP)
YALI1_B29995g	Compare to YALI0B23078g, similar to uniprot|Q9HEF8 Neurospora crassa Related to membrane protein
YALI1_B30024g	Compare to YALI0B23100g, weakly similar to DEHA0E01430g Debaryomyces hansenii IPF 5716.1
YALI1_B30036g	Compare to YALI0B23111g, gnl|GLV|YALI0B23111g [Yarrowia lipolytica] no similarity
YALI1_B30039g	Compare to YALI0B23122g, similar to Saccharomyces cerevisiae YNL200C; ancestral locus Anc_2.49, similar to uniprot|O13725 Schizosaccharomyces pombe Hypothetical protein C15A10.05c in chromosome I
YALI1_B30066g	Compare to YALI0B23144g, weakly similar to uniprot|P47074 Saccharomyces cerevisiae YJL013c MAD3 spindle-assembly checkpoint protein, some similarities with uniprot|O94751 Schizosaccharomyces pombe Checkpoint serine/threonine- protein kinase bub1, similar to Saccharomyces cerevisiae BUB1 (YGR188C) and MAD3 (YJL013C); ancestral locus Anc_5.162
YALI1_B30090g	Compare to YALI0B23188g, similar to Saccharomyces cerevisiae ADE2 (YOR128C); ancestral locus Anc_5.455, highly similar to uniprot|Q9P4V1 Candida boidinii Phosphoribosyl-5-aminoimidazole carboxylase
YALI1_B30123g	Compare to YALI0B23210g, similar to Saccharomyces cerevisiae RRN7 (YJL025W); ancestral locus Anc_5.183, some similarities with uniprot|P40992 Saccharomyces cerevisiae YJL025w RRN7 polymerase I specific transcription initiation factor singleton
YALI1_B30146g	Compare to YALI0B23232g, similar to Saccharomyces cerevisiae PBP1 (YGR178C); ancestral locus Anc_5.182, weakly similar to uniprot|P53297 Saccharomyces cerevisiae YGR178c PBP1 PAB1P interacting protein singleton
YALI1_B30162g	Compare to YALI0B23254g, weakly similar to KLLA0E05225g Kluyveromyces lactis IPF 3506.1
YALI1_B30163g	Compare to YALI0B23276g, similar to Saccharomyces cerevisiae VMA21 (YGR105W); ancestral locus Anc_3.449, similar to uniprot|P41806 Saccharomyces cerevisiae YGR105W Vacuolar ATPase assembly integral membrane protein VMA21
YALI1_B30181g	Compare to YALI0B23298g, similar to Saccharomyces cerevisiae ERG24 (YNL280C); ancestral locus Anc_3.81, similar to uniprot|P32462 Saccharomyces cerevisiae YNL280c Delta(14)-sterol reductase (EC 1.3.1.70)
YALI1_B30182g	Compare to YALI0B23320g, weakly similar to uniprot|P32585 Saccharomyces cerevisiae YGR104c SRB5 DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit, similar to Saccharomyces cerevisiae SRB5 (YGR104C); ancestral locus Anc_3.448
YALI1_B30214g	Compare to YALI0B23342g, highly similar to uniprot|P53261 Saccharomyces cerevisiae YGR103w similarity to zebrafish essential for embryonic development gene pescadillo singleton, similar to Saccharomyces cerevisiae NOP7 (YGR103W); ancestral locus Anc_3.447
YALI1_B30218g	Compare to YALI0B23364g, similar to Saccharomyces cerevisiae PCP1 (YGR101W); ancestral locus Anc_3.445, weakly similar to uniprot|P53259 Saccharomyces cerevisiae YGR101w weak similarity to B.subtilis YqgP singleton
YALI1_B30234g	Compare to YALI0B23386g, no similarity
YALI1_B30275g	Compare to YALI0B23430g, similar to Saccharomyces cerevisiae FMS1 (YMR020W); ancestral locus Anc_2.567, weakly similar to uniprot|P31225 Candida albicans Corticosteroid-binding protein
YALI1_B30293g	Compare to YALI0B23452g, no similarity
YALI1_B30337g	Compare to YALI0B23474g, no similarity
YALI1_B30382g	Compare to YALI0B23496g, no similarity possibly noncoding
YALI1_C00116g	Compare to YALI0C00110g, weakly similar to uniprot|Q9P731 Neurospora crassa Hypothetical 48.8 kDa protein
YALI1_C00141g	Converted to coding from non-coding YALI0C00132g, similar to DEHA0D11396g Debaryomyces hansenii IPF 1233.1 frameshift no start
YALI1_C00164g	Compare to YALI0C00165g, similar to uniprot|Q9P371 Schizosaccharomyces pombe, similar to Saccharomyces cerevisiae YLR073C; ancestral locus Anc_8.13
YALI1_C00209g	Compare to YALI0C00187g, weakly similar to uniprot|Q8X227 Cryptococcus neoformans O-acetyltransferase or uniprot|Q8X226 Cryptococcus neoformans O- acetyltransferase and uniprot|Q96PB1 Homo sapiens C7ORF12 or uniprot|Q8WZ77 Homo sapiens O-acetyltransferase
YALI1_C00230g	Compare to YALI0C00209g, similar to uniprot|P32784 Saccharomyces cerevisiae YBL011w SCT1 suppresses a choline-transport mutant
YALI1_C00258g	Compare to YALI0C00231g, similar to uniprot|Q99156 Yarrowia lipolytica Lipase 1 precursor (EC 3.1.1.3)
YALI1_C00293g	Compare to YALI0C00253g, highly similar to uniprot|P07342 Saccharomyces cerevisiae YMR108W Acetolactate synthase mitochondrial precursor (EC 4.1.3.18) (Acetohydroxy-acid synthase) (ALS) (AHAS), similar to Saccharomyces cerevisiae ILV2 (YMR108W); ancestral locus Anc_2.441
YALI1_C00331g	Compare to YALI0C00275g, no similarity
YALI1_C00335g	Compare to YALI0C00297g, no similarity
YALI1_C353g	Compare to YALI0C00319g, similar to uniprot|P47137 Saccharomyces cerevisiae Probable oxidoreductase YJR096W
YALI1_C00368g	Compare to YALI0C00341g, no similarity
YALI1_C00422g	Compare to YALI0C00363g, similar to uniprot|P32657 Saccharomyces cerevisiae YER164W CHD1 protein
YALI1_C00442g	Compare to YALI0C00385g, similar to uniprot|Q94C55 Arabidopsis thaliana Hypothetical 59.4 kDa protein
YALI1_C00464g	Compare to YALI0C00407g, Isopropyl Malate Dehydrogenase (LEU2),uniprot|P18120 Yarrowia lipolytica beta-isopropyl- malate dehydrogenase, similar to Saccharomyces cerevisiae LEU2 (YCL018W); ancestral locus Anc_1.402
YALI1_C00503g	Compare to YALI0C00429g, similar to Saccharomyces cerevisiae GAL83 (YER027C) and SIP2 (YGL208W); ancestral locus Anc_3.517, similar to uniprot|Q04739 Saccharomyces cerevisiae YER027C Glucose repression protein GAL83 (SPM1 protein)
YALI1_C00550g	Compare to YALI0C00451g, similar to uniprot|P53388 Saccharomyces cerevisiae YPL265W Dicarboxylic amino acid permease
YALI1_C00615g	Compare to YALI0C00473g, similar to Saccharomyces cerevisiae YHL029C; ancestral locus Anc_4.19, some similarities with uniprot|P38738 Saccharomyces cerevisiae YHL029c hypothetical protein
YALI1_C00694g	Compare to YALI0C00495g, similar to uniprot|Q12675 Saccharomyces cerevisiae YDR093W Potential phospholipid-transporting ATPase 2 (EC 3. 6.3.1), similar to Saccharomyces cerevisiae DNF2 (YDR093W) and DNF1 (YER166W); ancestral locus Anc_8.231
YALI1_C00739g	Compare to YALI0C00539g, weakly similar to uniprot|P04147 Saccharomyces cerevisiae YER165w PAB1 mRNA polyadenylate-binding protein, similar to Saccharomyces cerevisiae PAB1 (YER165W); ancestral locus Anc_8.229
YALI1_C00766g	Compare to YALI0C00550g, gnl|GLV|YALI0C00550g [Yarrowia lipolytica] no similarity
YALI1_C00772g	Compare to YALI0C00561g, similar to Saccharomyces cerevisiae UBC13 (YDR092W); ancestral locus Anc_8.230, highly similar to uniprot|P52490 Saccharomyces cerevisiae YDR092w UBC13 E2 ubiquitin-conjugating enzyme
YALI1_C00784g	Compare to YALI0C00583g, no similarity
YALI1_C00826g	Compare to YALI0C00627g, similar to uniprot|P39709 Saccharomyces cerevisiae YAL067c SEO1 suppressor of sulfoxyde ethionine resistance P10.2.f5.1
YALI1_C00841g	Compare to YALI0C00649g, weakly similar to DEHA0D03388g Debaryomyces hansenii or DEHA0D03410g Debaryomyces hansenii
YALI1_C00913g	Compare to YALI0C00671g, similar to uniprot|P41411 Schizosaccharomyces pombe Cell division control protein 18, similar to Saccharomyces cerevisiae CDC6 (YJL194W); ancestral locus Anc_1.142
YALI1_C00958g	Compare to YALI0C00693g, highly similar to uniprot|Q6Q547 Saccharomyces cerevisiae YHR072W-A NOP10 nucleolar rRNA processing protein, similar to Saccharomyces cerevisiae NOP10 (YHR072W-A); ancestral locus Anc_5.353
YALI1_C00962g	Compare to YALI0C00715g, similar to Saccharomyces cerevisiae DAD4 (YDR320C-A); ancestral locus Anc_5.354, similar to uniprot|P69851 Saccharomyces cerevisiae YDR320ca DAD4
YALI1_C00999g	Compare to YALI0C00759g, similar to uniprot|Q877C1 Pichia anomala Na+/H+ exchanger HaNHA1
YALI1_C01043g	Compare to YALI0C00781g, no similarity
YALI1_C01072g	Compare to YALI0C00803g, similar to uniprot|P30574 Candida albicans Carboxypeptidase Y precursor (EC 3.4.16.5) (Carboxypeptidase YSCY)
YALI1_C01106g	Compare to YALI0C00825g, similar to uniprot|Q872Z4 Neurospora crassa Related to monocarboxylate transporter
YALI1_C01129g	Compare to YALI0C00847g, similar to DEHA0A10670g Debaryomyces hansenii IPF 7135.1
YALI1_C01161g	Compare to YALI0C00869g, no similarity
YALI1_C01244g	Truncated form of YALI0C00891g, similar to uniprot|P25333 Saccharomyces cerevisiae YCR008w SAT4 serine/threonine-specific protein kinase
YALI1_C01297g	Compare to YALI0C00913g, similar to uniprot|Q12220 Saccharomyces cerevisiae YLR129W DOM34 interacting protein 2
YALI1_C01301t	Partial Line element
YALI1_C01338g	Compare to YALI0C00957g, similar to Saccharomyces cerevisiae YDR266C; ancestral locus Anc_5.629, weakly similar to uniprot|Q05580 Saccharomyces cerevisiae YDR266c
YALI1_C01356g	Compare to YALI0C00979g, weakly similar to uniprot|Q871S2 Neurospora crassa CAD70921 Related to acid sphingomyelinase
YALI1_C01393g	Compare to YALI0C01001g, no similarity
YALI1_C01416g	Compare to YALI0C01023g, uniprot|Q9UVF7 Yarrowia lipolytica peroxisomal assembly protein Peroxin 10, similar to Saccharomyces cerevisiae PEX10 (YDR265W); ancestral locus Anc_5.628
YALI1_C01433g	Compare to YALI0C01045g, weakly similar to uniprot|Q08748 Saccharomyces cerevisiae YOR296w unknown function, similar to Saccharomyces cerevisiae YOR296W; ancestral locus Anc_8.765
YALI1_C01491g	Compare to YALI0C01067g, no similarity
YALI1_C01505g	Compare to YALI0C01089g, no similarity
YALI1_C01520g	Compare to YALI0C01111g, similar to Saccharomyces cerevisiae RIB5 (YBR256C); ancestral locus Anc_7.181, similar to uniprot|P38145 Saccharomyces cerevisiae YBR256C Riboflavin synthase alpha chain (EC 2.5.1.9)
YALI1_C01535g	Compare to YALI0C01133g, similar to Saccharomyces cerevisiae YBR074W; ancestral locus Anc_3.295, some similarities with uniprot|P38244 Saccharomyces cerevisiae YBR074w weak similarity to aminopeptidase Y
YALI1_C01576g	Compare to YALI0C01155g, similar to DEHA0G00737g Debaryomyces hansenii IPF 1033.1
YALI1_C01596g	Compare to YALI0C01177g, no similarity
YALI1_C01675g	Compare to YALI0C01199g, no similarity
YALI1_C01720g	Compare to YALI0C01221g, similar to uniprot|Q9P3P6 Neurospora crassa Related to 26s proteasome subunit p28
YALI1_C01789g	Compare to YALI0C01243g, similar to uniprot|P32597 Saccharomyces cerevisiae YIL126W Nuclear protein STH1/NPS1
YALI1_C01800g	Compare to YALI0C01287g, similar to uniprot|Q86TN4 Homo sapiens tRNA splicing 2 phosphotransferase 1, similar to Saccharomyces cerevisiae TPT1 (YOL102C); ancestral locus Anc_3.88
YALI1_C01810g	Compare to YALI0C01309g, weakly similar to uniprot|Q9D1Q1 Mus musculus M- phase phosphoprotein 6
YALI1_C01826g	Compare to YALI0C01331g, similar to uniprot|O13997 Schizosaccharomyces pombe Hypothetical protein and uniprot|P25637 Saccharomyces cerevisiae YCR059C Hypothetical 29.0 kDa protein in PWP2- SUP61 intergenic region
YALI1_C01847g	Compare to YALI0C01375g, similar to Saccharomyces cerevisiae YLR278C; ancestral locus Anc_6.75, weakly similar to uniprot|Q05854 Saccharomyces cerevisiae Putative transcriptional regulatory protein YLR278C
YALI1_C01876g	Compare to YALI0C01397g, weakly similar to DEHA0B05676g Debaryomyces hansenii IPF 9611.1
YALI1_C01944g	Compare to YALI0C01411g, similar to uniprot|Q9UVK9 Yarrowia lipolytica Fks1p
YALI1_C01965g	Compare to YALI0C01419g, similar to uniprot|Q9C1S8 Candida albicans CaNAG1 protein
YALI1_C01993g	Compare to YALI0C01441g, weakly similar to uniprot|O42997 Schizosaccharomyces pombe Hypothetical 33.6 kDa protein, similar to Saccharomyces cerevisiae YLR283W; ancestral locus Anc_6.77
YALI1_C02053g	Compare to YALI0C01463g, similar to uniprot|Q04174 Saccharomyces cerevisiae YOR149C SMP3 protein kinase C pathway protein
YALI1_C02086g	Compare to YALI0C01485g, similar to uniprot|Q04174 Saccharomyces cerevisiae YOR149C SMP3 protein kinase C pathway protein, similar to Saccharomyces cerevisiae SMP3 (YOR149C); ancestral locus Anc_5.487
YALI1_C02117g	Compare to YALI0C01507g, no similarity
YALI1_C02152g	Compare to YALI0C01573g, similar to Saccharomyces cerevisiae RAD30 (YDR419W); ancestral locus Anc_5.523, similar to uniprot|O42917 Schizosaccharomyces pombe Sister chromatid cohesion protein eso1
YALI1_C02188g	Truncated form of YALI0C01595g, similar to Saccharomyces cerevisiae SEC10 (YLR166C); ancestral locus Anc_8.384, similar to uniprot|Q06245 Saccharomyces cerevisiae YLR166C Exocyst complex component SEC10
YALI1_C02215g	Compare to YALI0C01617g, some similarities with uniprot|P42951 Saccharomyces cerevisiae YJL100w
YALI1_C02248g	Converted to coding from non-coding YALI0C01639g, similar to uniprot|Q06472 Saccharomyces cerevisiae Beta- glucan synthesis-associated protein (Killer toxin- resistance protein 6) and uniprot|P33336 Saccharomyces cerevisiae YGR143w SKN1 glucan synthase subunit frameshift
YALI1_C02332g	Compare to YALI0C01694g, similar to DEHA0B02497g Debaryomyces hansenii
YALI1_C02391g	Compare to YALI0C01716g, similar to Saccharomyces cerevisiae HEM12 (YDR047W); ancestral locus Anc_3.294, similar to uniprot|P32347 Saccharomyces cerevisiae YDR047W Uroporphyrinogen decarboxylase (EC 4.1.1.37) (URO- D) (UPD)
YALI1_C02402g	Compare to YALI0C01738g, similar to Saccharomyces cerevisiae SQT1 (YIR012W); ancestral locus Anc_7.180, similar to uniprot|P35184 Saccharomyces cerevisiae YIR012W Ribosome assembly protein SQT1
YALI1_C02441g	Compare to YALI0C01760g, no similarity
YALI1_C02487g	Compare to YALI0C01782g, no similarity
YALI1_C02521g	Compare to YALI0C01826g, no similarity
YALI1_C02550g	Compare to YALI0C01859g, similar to uniprot|Q02253 Rattus norvegicus Methylmalonate-semialdehyde dehydrogenase (acylating) mitochondrial precursor (EC 1.2.1.27) (MMSDH)
YALI1_C02588g	Compare to YALI0C01903g, weakly similar to DEHA0D05709g Debaryomyces hansenii IPF 10588.1
YALI1_C02611g	Compare to YALI0C01925g, similar to uniprot|Q6CDB7 Yarrowia lipolytica YALI0A01650g
YALI1_C02624g	Compare to YALI0C01947g, no similarity
YALI1_C02639g	Compare to YALI0C01969g, no similarity
YALI1_C02686g	Compare to YALI0C01991g, no similarity
YALI1_C02831g	Compare to YALI0C02057g, similar to uniprot|P38811 Saccharomyces cerevisiae YHR099w TRA1 component of the Ada-Spt transcriptional regulatory complex, similar to Saccharomyces cerevisiae TRA1 (YHR099W); ancestral locus Anc_5.402
YALI1_C02866g	Compare to YALI0C02167g, no similarity possibly noncoding
YALI1_C02904g	Compare to YALI0C02211g, similar to Saccharomyces cerevisiae YMR221C; ancestral locus Anc_8.739, similar to DEHA0G24266g Debaryomyces hansenii IPF 4821.1 or DEHA0E23661g Debaryomyces hansenii IPF 11058.1
YALI1_C03036g	Compare to YALI0C02233g, no similarity
YALI1_C03221g	Compare to YALI0C02255g, no similarity
YALI1_C03246g	Compare to YALI0C02321g, similar to uniprot|Q96U89 Neurospora crassa Conserved hypothetical protein
YALI1_C03272g	Compare to YALI0C02343g, similar to DEHA0B14806g Debaryomyces hansenii IPF 512.1
YALI1_C03335g	Compare to YALI0C02365g, similar to Saccharomyces cerevisiae YLR419W; ancestral locus Anc_4.291, similar to uniprot|Q8X0V7 Neurospora crassa Conserved hypothetical protein
YALI1_C03349g	Compare to YALI0C02387g, similar to Saccharomyces cerevisiae INO4 (YOL108C); ancestral locus Anc_3.75, uniprot|Q6L8K6 Yarrowia lipolytica YALI0C02387g YAS1 basic helix-loop-helix transcription factor essential for cytochrome p450 induction in response to alkanes
YALI1_C03378g	Compare to YALI0C02409g, similar to uniprot|P39719 Saccharomyces cerevisiae YAL053W Hypothetical 87.5 kDa protein in ACS1-GCV3 intergenic region
YALI1_C03415g	Compare to YALI0C02431g, similar to uniprot|Q9Y7G4 Emericella nidulans Carnitine/acyl carnitine carrier
YALI1_C03461g	Compare to YALI0C02453g, weakly similar to uniprot|Q08754 Saccharomyces cerevisiae YOR299w BUD7 involved in bud-site selection
YALI1_C03495g	Compare to YALI0C02475g, similar to Saccharomyces cerevisiae ALG12 (YNR030W); ancestral locus Anc_6.338, similar to uniprot|P53730 Saccharomyces cerevisiae YNR030w ECM39 involved in cell wall biogenesis and architecture singleton
YALI1_C03513g	Compare to YALI0C02497g, no similarity
YALI1_C03534g	Compare to YALI0C02519g, weakly similar to uniprot|Q6CHW5 Yarrowia lipolytica YALI0A03971g
YALI1_C03550g	Compare to YALI0C02541g, similar to uniprot|O74395 Schizosaccharomyces pombe MFS efflux transporter of unknown specificity
YALI1_C03582g	Compare to YALI0C02563g, similar to uniprot|Q05959 Kluyveromyces lactis Transcription initiation factor IIB (General transcription factor TFIIB)
YALI1_C03596g	Compare to YALI0C02585g, similar to uniprot|Q9HEK6 Neurospora crassa Conserved hypothetical protein
YALI1_C03615g	Compare to YALI0C02607g, weakly similar to DEHA0C11594g Debaryomyces hansenii IPF 1664.1
YALI1_C03674g	Compare to YALI0C02629g, weakly similar to uniprot|Q86KG7 Dictyostelium discoideum R2005 protein, similar to Saccharomyces cerevisiae YBL054W and DOT6 (YER088C); ancestral locus Anc_7.372
YALI1_C03735g	Compare to YALI0C02651g, similar to Saccharomyces cerevisiae IOC4 (YMR044W); ancestral locus Anc_2.609, weakly similar to uniprot|O94312 Schizosaccharomyces pombe Hypothetical PWWP domain coiled- coil protein
YALI1_C03774g	Compare to YALI0C02717g, weakly similar to uniprot|P25037 Saccharomyces cerevisiae YDL122w UBP1 Ubiquitin carboxyl-terminal hydrolase 1
YALI1_C03842g	Compare to YALI0C02761g, weakly similar to uniprot|Q9P7B7 Schizosaccharomyces pombe Hypothetical 35.3 kDa protein
YALI1_C03848g	Compare to YALI0C02783g, similar to uniprot|Q86ZH9 Neurospora crassa 64C2. 200 Related to putative tartrate transporter
YALI1_C03874g	Compare to YALI0C02805g, similar to uniprot|Q9HE38 Neurospora crassa Probable NADPH-dependent beta-ketoacyl reductase (rhlG)
YALI1_C03887g	Compare to YALI0C02827g, no similarity
YALI1_C03914g	Compare to YALI0C02849g, some similarities with uniprot|P38757 Saccharomyces cerevisiae YHR004c NEM1 required for nuclear morphology, similar to Saccharomyces cerevisiae NEM1 (YHR004C); ancestral locus Anc_2.530
YALI1_C03933g	Compare to YALI0C02871g, similar to Saccharomyces cerevisiae YDR379C-A; ancestral locus Anc_5.454, similar to KLLA0E02574g Kluyveromyces lactis IPF 3681.1
YALI1_C03939g	Compare to YALI0C02893g, no similarity
YALI1_C03948g	Truncated form of YALI0C02915g, no similarity
YALI1_C03969g	Compare to YALI0C02937g, similar to Saccharomyces cerevisiae YGR106C; ancestral locus Anc_3.450, weakly similar to uniprot|Q8X0S5 Neurospora crassa Conserved hypothetical protein
YALI1_C03988g	Compare to YALI0C02959g, similar to Saccharomyces cerevisiae GCS1 (YDL226C) and SPS18 (YNL204C); ancestral locus Anc_2.46, similar to uniprot|P35197 Saccharomyces cerevisiae YDL226C ADP-ribosylation factor GTPase-activating protein GCS1
YALI1_C04031g	Compare to YALI0C02981g, weakly similar to uniprot|P47000 Saccharomyces cerevisiae YJL159w HSP150 member of the PIR1P/HSP150P/PIR3P family P5.2.f4.1
YALI1_C04067g	Compare to YALI0C03003g, similar to uniprot|P32573 Saccharomyces cerevisiae YNL202w SPS19 peroxisomal 2 4-dienoyl-CoA reductase singleton, similar to Saccharomyces cerevisiae SPS19 (YNL202W); ancestral locus Anc_2.47
YALI1_C04093g	Compare to YALI0C03025g, similar to uniprot|P46367 Saccharomyces cerevisiae YOR374W Potassium-activated aldehyde dehydrogenase mitochondrial precursor (EC 1.2.1.3) (K(+)-activated acetaldehyde dehydrogenase) (K(+)-ACDH)
YALI1_C04117g	Compare to YALI0C03047g, weakly similar to uniprot|P40505 Saccharomyces cerevisiae YIL084C SDS3 protein
YALI1_C04143g	Compare to YALI0C03069g, similar to uniprot|P23202 Saccharomyces cerevisiae YNL229c URE2 nitrogen catabolite repression regulator, similar to Saccharomyces cerevisiae URE2 (YNL229C); ancestral locus Anc_2.14
YALI1_C04162g	Compare to YALI0C03091g, no similarity
YALI1_C04201g	Compare to YALI0C03135g, no similarity
YALI1_C04265g	Compare to YALI0C03179g, similar to Saccharomyces cerevisiae LCB1 (YMR296C); ancestral locus Anc_5.28, similar to uniprot|Q96VQ7 Emericella nidulans Serine palmitoyl CoA transferase subunit LCBA
YALI1_C04281g	Compare to YALI0C03201g, uniprot|Q6CD73 Yarrowia lipolytica NADH-ubiquinone reductase complex accessory subunit 8 7 kDa
YALI1_C04302g	Compare to YALI0C03223g, similar to Saccharomyces cerevisiae YGR243W and YHR162W; ancestral locus Anc_5.83, similar to uniprot|P53311 Saccharomyces cerevisiae YGR243W Hypothetical 16.2 kDa protein in PFK1-TDS4 intergenic region
YALI1_C04328g	Compare to YALI0C03245g, similar to uniprot|Q04934 Saccharomyces cerevisiae YDR229W Hypothetical 50.0 kDa protein, similar to Saccharomyces cerevisiae IVY1 (YDR229W); ancestral locus Anc_8.450
YALI1_C04351g	Compare to YALI0C03267g, similar to uniprot|Q6CGW7 Yarrowia lipolytica YALI0A15466g
YALI1_C04389g	Compare to YALI0C03333g, weakly similar to CAGL0E01397g Candida glabrata and uniprot|Q03761 Saccharomyces cerevisiae YDR145W, similar to Saccharomyces cerevisiae TAF12 (YDR145W); ancestral locus Anc_8.323
YALI1_C04401g	Compare to YALI0C03355g, highly similar to uniprot|P38219 Saccharomyces cerevisiae YBR025c strong similarity to Ylf1p
YALI1_C04436g	Compare to YALI0C03377g, weakly similar to uniprot|P26309 Saccharomyces cerevisiae YGL116w CDC20 cell division control protein
YALI1_C04490g	Compare to YALI0C03399g, similar to Saccharomyces cerevisiae PTC1 (YDL006W); ancestral locus Anc_3.215, some similarities with uniprot|Q6M9I3 Neurospora crassa NCU00434.1 hypothetical protein
YALI1_C04531g	Converted to coding from non-coding YALI0C03421g, similar to Saccharomyces cerevisiae SNF4 (YGL115W); ancestral locus Anc_6.136, highly similar to uniprot|P12904 Saccharomyces cerevisiae YGL115w SNF4 nuclear regulatory protein no start
YALI1_C04553g	Compare to YALI0C03443g, weakly similar to uniprot|Q89C37 Bradyrhizobium japonicum Blr7961 protein
YALI1_C04570g	Compare to YALI0C03465g, similar to uniprot|P15992 Saccharomyces cerevisiae YBR072w HSP26 heat shock protein
YALI1_C04577t	Full length Line element
YALI1_C04599t	Compare to YALI0C03498g, Full length Line element,uniprot|Q8NIP3 Yarrowia lipolytica Reverse transcriptase
YALI1_C04672g	Compare to YALI0C03520g, similar to uniprot|Q9UT85 Schizosaccharomyces pombe WD repeat protein
YALI1_C04690g	Compare to YALI0C03542g, similar to uniprot|Q6CBF2 Yarrowia lipolytica YALI0C19360g
YALI1_C04720g	Compare to YALI0C03564g, no similarity, similar to Saccharomyces cerevisiae RTG3 (YBL103C); ancestral locus Anc_7.438
YALI1_C04771g	Compare to YALI0C03586g, no similarity
YALI1_C04798g	Compare to YALI0C03608g, similar to uniprot|P25568 Saccharomyces cerevisiae YCL038c similarity to bacterial membrane transporter singleton
YALI1_C04818g	Compare to YALI0C03630g, no similarity
YALI1_C04853g	Compare to YALI0C03652g, some similarities with uniprot|O13612 Schizosaccharomyces pombe Pi021 protein (Hypothetical 46.4 kDa protein), similar to Saccharomyces cerevisiae ULP1 (YPL020C); ancestral locus Anc_8.72
YALI1_C04882g	Compare to YALI0C03674g, similar to uniprot|P13188 Saccharomyces cerevisiae YOR168W Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA ligase) (GlnRS), similar to Saccharomyces cerevisiae GLN4 (YOR168W); ancestral locus Anc_6.51
YALI1_C04925g	Compare to YALI0C03696g, similar to Saccharomyces cerevisiae MOH1 (YBL049W); ancestral locus Anc_7.492, weakly similar to uniprot|P38191 Saccharomyces cerevisiae Yippee-like protein YBL049W
YALI1_C04962g	Compare to YALI0C03718g, similar to Saccharomyces cerevisiae YBR271W; ancestral locus Anc_1.325, similar to KLLA0E21626g Kluyveromyces lactis IPF 2352.1
YALI1_C04991g	Compare to YALI0C03762g, similar to Saccharomyces cerevisiae YJL046W; ancestral locus Anc_1.347, similar to uniprot|Q8AWD3 Brachydanio rerio Similar to lipoyltransferase (Fragment)
YALI1_C04996g	Compare to YALI0C03784g, similar to Saccharomyces cerevisiae POP4 (YBR257W); ancestral locus Anc_1.346, weakly similar to uniprot|P38336 Saccharomyces cerevisiae YBR257W RNases MRP/P 32.9 kDa subunit (RNA processing protein POP4)
YALI1_C05022g	Compare to YALI0C03806g, no similarity
YALI1_C05088g	Compare to YALI0C03828g, similar to uniprot|P38737 Saccharomyces cerevisiae YHL030w ECM29 involved in cell wall biogenesis and architecture, similar to Saccharomyces cerevisiae ECM29 (YHL030W); ancestral locus Anc_4.15
YALI1_C05125g	Compare to YALI0C03850g, similar to Saccharomyces cerevisiae NUP2 (YLR335W); ancestral locus Anc_4.164, weakly similar to uniprot|P14907 Saccharomyces cerevisiae YJL041W Nucleoporin NSP1 (Nuclear pore protein NSP1) (Nucleoskeletal-like protein) (P110)
YALI1_C05133g	Compare to YALI0C03872g, similar to Saccharomyces cerevisiae RPS25A (YGR027C) and RPS25B (YLR333C); ancestral locus Anc_4.163, highly similar to uniprot|P07282 Saccharomyces cerevisiae YLR333c RPS31B ribosomal protein
YALI1_C05178g	Compare to YALI0C03894g, weakly similar to DEHA0F04158g Debaryomyces hansenii IPF 8785.1
YALI1_C05204g	Compare to YALI0C03916g, weakly similar to KLLA0C09394g Kluyveromyces lactis IPF 6186.1
YALI1_C05252g	Compare to YALI0C03982g, similar to Saccharomyces cerevisiae PRP19 (YLL036C); ancestral locus Anc_4.18, some similarities with uniprot|O14011 Schizosaccharomyces pombe Cell cycle control protein cwf8
YALI1_C05264g	Compare to YALI0C04004g, similar to uniprot|P32629 Saccharomyces cerevisiae YEL036c ANP1 required for protein glycosylation in the golgi
YALI1_C05296g	Compare to YALI0C04026g, similar to DEHA0E25410g Debaryomyces hansenii IPF 10943.1
YALI1_C05347g	Compare to YALI0C04048g, no similarity
YALI1_C05372g	Compare to YALI0C04070g, some similarities with uniprot|P50875 Saccharomyces cerevisiae YOL148c SPT20 member of the TBP class of SPT proteins that alter transcription site selection, similar to Saccharomyces cerevisiae SPT20 (YOL148C); ancestral locus Anc_3.2
YALI1_C05386g	Compare to YALI0C04092g, similar to uniprot|Q00317 Candida boidinii Peroxisomal membrane protein PMP30B (PMP32) (Peroxin-11B) or uniprot|Q00316 Candida boidinii Peroxisomal membrane start by similarity protein PMP30A (PMP31) (Peroxin-11A), similar to Saccharomyces cerevisiae PEX11 (YOL147C); ancestral locus Anc_3.3
YALI1_C05423g	Compare to YALI0C04114g, weakly similar to uniprot|P53281 Saccharomyces cerevisiae YGR136w
YALI1_C05494g	Compare to YALI0C04136g, weakly similar to wi|NCU05054.1 Neurospora crassa NCU05054.1 predicted protein
YALI1_C05554g	Compare to YALI0C04158g, similar to uniprot|P18961 Saccharomyces cerevisiae YMR104C Serine/threonine-protein kinase YPK2/YKR2
YALI1_C05570g	Compare to YALI0C04180g, similar to uniprot|P32383 Saccharomyces cerevisiae YPL268w PLC1 1-phosphatidylinositol-4 5-bisphosphate phosphodiesterase, similar to Saccharomyces cerevisiae PLC1 (YPL268W); ancestral locus Anc_6.3
YALI1_C05636g	Compare to YALI0C04213g, similar to Saccharomyces cerevisiae ENP1 (YBR247C); ancestral locus Anc_6.165, similar to uniprot|P38333 Saccharomyces cerevisiae YBR247c ENP1 effects N-glycosylation
YALI1_C05649g	Compare to YALI0C04235g, no similarity
YALI1_C05710g	Compare to YALI0C04257g, similar to uniprot|Q02820 Saccharomyces cerevisiae YJL205C Non-classical export protein 1
YALI1_C05734g	Compare to YALI0C04279g, similar to uniprot|Q12303 Saccharomyces cerevisiae Putative aspartyl protease YLR121C precursor (EC 3.4.23.-)
YALI1_C05757g	Compare to YALI0C04301g, some similarities with uniprot|AAH44201 Danio rerio
YALI1_C05789g	Compare to YALI0C04323g, weakly similar to uniprot|P53322 Saccharomyces cerevisiae YGR260w TNA1 similarity to allantoate transport protein
YALI1_C05813g	Compare to YALI0C04345g, similar to uniprot|Q04031 Saccharomyces cerevisiae YDR412W D9461.3P, similar to Saccharomyces cerevisiae YDR412W; ancestral locus Anc_5.514
YALI1_C05820g	Compare to YALI0C04367g, similar to uniprot|Q12004 Saccharomyces cerevisiae YPR056W TFB4 protein, similar to Saccharomyces cerevisiae TFB4 (YPR056W); ancestral locus Anc_3.345
YALI1_C05837g	ancestral locus Anc_3.346
YALI1_C05857g	Compare to YALI0C04389g, no similarity
YALI1_C05880g	Compare to YALI0C04411g, similar to uniprot|P38925 Saccharomyces cerevisiae YOL122C Transporter protein SMF1/E
YALI1_C05908g	Compare to YALI0C04433g, highly similar to uniprot|Q92413 Emericella nidulans Ornithine aminotransferase (EC 2.6.1.13) (Ornithine--oxo- acid aminotransferase)
YALI1_C05931g	Compare to YALI0C04455g, weakly similar to uniprot|P53747 Saccharomyces cerevisiae YNR061C Hypothetical 24.3 kDa protein in BIO3- HXT17 intergenic region
YALI1_C05972g	Compare to YALI0C04477g, similar to uniprot|P38124 Saccharomyces cerevisiae YBR008c FLR1 fluconazole resistance protein
YALI1_C06006g	Compare to YALI0C04499g, similar to uniprot|P38124 Saccharomyces cerevisiae YBR008c FLR1 fluconazole resistance protein
YALI1_C06032g	Compare to YALI0C04521g, no similarity
YALI1_C06041g	Compare to YALI0C04543g, similar to Saccharomyces cerevisiae YDR333C; ancestral locus Anc_5.380, weakly similar to uniprot|Q05468 Saccharomyces cerevisiae YDR333C Chromosome IV COSMID 9651
YALI1_C06071g	Compare to YALI0C04565g, weakly similar to uniprot|Q9HF07 Candida albicans Cso1p (Fragment)
YALI1_C06106g	Compare to YALI0C04587g, similar to uniprot|Q10156 Schizosaccharomyces pombe Protein kinase lkh1 (EC 2.7.1.37) (EC 2.7.1.112)
YALI1_C06137g	Compare to YALI0C04620g, similar to Saccharomyces cerevisiae TIF4632 (YGL049C) and TIF4631 (YGR162W); ancestral locus Anc_4.56, weakly similar to uniprot|P39936 Saccharomyces cerevisiae YGL049c TIF4632 mRNA cap-binding protein (eIF4F) 130K subunit
YALI1_C06191g	Converted to coding from non-coding YALI0C04686g, similar to uniprot|Q9P702 Neurospora crassa Probable sugar transporter
YALI1_C06201g	Converted to coding from non-coding YALI0C04686g, similar to uniprot|Q9P702 Neurospora crassa Probable sugar transporter
YALI1_C06222g	Compare to YALI0C04730g, similar to uniprot|Q9P702 Neurospora crassa Probable sugar transporter
YALI1_C06259g	Compare to YALI0C04774g, similar to uniprot|Q9C1M3 Emericella nidulans Septin cdc11p
YALI1_C06298g	Compare to YALI0C04796g, weakly similar to uniprot|P46996 Saccharomyces cerevisiae YJL163c
YALI1_C06328g	Compare to YALI0C04818g, some similarities with uniprot|P34248 Saccharomyces cerevisiae YKL100c similarity to C.elegans hypothetical protein, similar to Saccharomyces cerevisiae YKL100C; ancestral locus Anc_2.481
YALI1_C06368g	Compare to YALI0C04884g, similar to uniprot|Q03193 Saccharomyces cerevisiae YDR090C Hypothetical 34.6 kDa protein
YALI1_C06394g	Compare to YALI0C04906g, some similarities with uniprot|Q9HEJ2 Neurospora crassa NCU01381.1 related to disease resistance protein aig2
YALI1_C06414g	Compare to YALI0C04928g, similar to Saccharomyces cerevisiae YPD1 (YDL235C); ancestral locus Anc_2.27, similar to uniprot|O94321 Schizosaccharomyces pombe Multistep phosphorelay regulator 1.
YALI1_C06459g	Compare to YALI0C05038g, similar to ca|CA5054|IPF3704 Candida albicans unknown function, similar to Saccharomyces cerevisiae MGS1 (YNL218W); ancestral locus Anc_2.26
YALI1_C06486g	Compare to YALI0C05060g, weakly similar to uniprot|Q8WZY8 Neurospora crassa Conserved hypothetical protein, similar to Saccharomyces cerevisiae YDL233W; ancestral locus Anc_2.32
YALI1_C06511g	Compare to YALI0C05082g, similar to uniprot|P40525 Saccharomyces cerevisiae YIL052c RPL34B ribosomal protein L34.e, similar to Saccharomyces cerevisiae RPL34A (YER056C-A) and RPL34B (YIL052C); ancestral locus Anc_7.237
YALI1_C06532g	Compare to YALI0C05104g, weakly similar to uniprot|Q02771 Saccharomyces cerevisiae YER058w PET117 cytochrome c oxidase assembly factor, similar to Saccharomyces cerevisiae PET117 (YER058W); ancestral locus Anc_7.239
YALI1_C06548g	Compare to YALI0C05126g, weakly similar to uniprot|P40038 Saccharomyces cerevisiae YER059w PCL6 cyclin like protein interacting with PHO85P, similar to Saccharomyces cerevisiae PCL6 (YER059W) and PCL7 (YIL050W); ancestral locus Anc_7.240
YALI1_C06597g	Compare to YALI0C05148g, highly similar to uniprot|Q10421 Schizosaccharomyces pombe 40S ribosomal protein S28 (S33), similar to Saccharomyces cerevisiae RPS28B (YLR264W) and RPS28A (YOR167C); ancestral locus Anc_6.53
YALI1_C06626g	Truncated form of YALI0C05170g, similar to Saccharomyces cerevisiae HIS1 (YER055C); ancestral locus Anc_7.232, uniprot|Q99145 Yarrowia lipolytica ATP phosphoribosyltransferase (EC 2.4.2.17)
YALI1_C06655g	Compare to YALI0C05236g, similar to uniprot|Q6CC46 Yarrowia lipolytica YALI0C12551g
YALI1_C06681g	Compare to YALI0C05258g, weakly similar to uniprot|P38840 Saccharomyces cerevisiae YHR137w ARO9 aromatic amino acid aminotransferase II
YALI1_C06695g	Compare to YALI0C05280g, similar to Saccharomyces cerevisiae KAE1 (YKR038C); ancestral locus Anc_1.245, similar to DEHA0E24288g Debaryomyces hansenii IPF 11017.1
YALI1_C06716g	Compare to YALI0C05302g, some similarities with uniprot|Q9P887 Candida albicans Sec20p, similar to Saccharomyces cerevisiae SEC20 (YDR498C); ancestral locus Anc_3.83
YALI1_C06770g	Compare to YALI0C05324g, some similarities with uniprot|Q96U73 Neurospora crassa Conserved hypothetical protein
YALI1_C06870g	Compare to YALI0C05346g, similar to uniprot|P53040 Saccharomyces cerevisiae YGL112C Transcription initiation factor TFIID 60 kDa subunit (TAFII-60)
YALI1_C06917g	Compare to YALI0C05368g, similar to uniprot|Q9P7C7 Schizosaccharomyces pombe DEAD/DEAH box RNA helicase
YALI1_C06929g	Converted to coding from non-coding YALI0C05390g, no similarity
YALI1_C06951g	Compare to YALI0C05467g, similar to Saccharomyces cerevisiae GRX1 (YCL035C) and GRX2 (YDR513W); ancestral locus Anc_1.38, similar to uniprot|P17695 Saccharomyces cerevisiae YDR513W Glutaredoxi (Thioltransferase)
YALI1_C06973g	Compare to YALI0C05489g, similar to Saccharomyces cerevisiae LSB5 (YCL034W); ancestral locus Anc_1.39, some similarities with uniprot|Q8NIM9 Saccharomyces cerevisiae YCL034W Hypothetical protein
YALI1_C06994g	Compare to YALI0C05500g, gnl|GLV|YALI0C05500g [Yarrowia lipolytica] some similarities with gb|EAQ98659.1 Congregibacter litoralis oligoribonuclease
YALI1_C07028g	Compare to YALI0C05511g, weakly similar to uniprot|Q06705 Saccharomyces cerevisiae YLR380w CSR1 weak similarity to SEC14 protein
YALI1_C07077g	Compare to YALI0C05533g, similar to Saccharomyces cerevisiae YCL033C; ancestral locus Anc_1.40, similar to uniprot|Q9ZS91 Arabidopsis thaliana T4B21.5 protein (Hypothetical protein)
YALI1_C07109g	Compare to YALI0C05555g, similar to uniprot|Q7ZXE3 Xenopus laevis U5 snRNP- specific 40 kDa pro
YALI1_C07117g	Truncated form of YALI0C05577g, similar to wi|NCU07727.1 Neurospora crassa NCU07727. 1 predicted protein (27721 - 26763), similar to Saccharomyces cerevisiae TVP15 (YDR100W); ancestral locus Anc_8.244
YALI1_C07137g	Compare to YALI0C05599g, similar to uniprot|Q03862 Saccharomyces cerevisiae YDR101c, similar to Saccharomyces cerevisiae ARX1 (YDR101C); ancestral locus Anc_8.245
YALI1_C07170g	Compare to YALI0C05621g, similar to uniprot|P01097 Saccharomyces cerevisiae YDL181w INH1 inhibitor of mitochondrial ATPase, similar to Saccharomyces cerevisiae INH1 (YDL181W) and STF1 (YDL130W-A); ancestral locus Anc_7.294
YALI1_C07199g	Compare to YALI0C05643g, similar to uniprot|O94397 Schizosaccharomyces pombe Hypothetical 38.6 kDa protein, similar to Saccharomyces cerevisiae SGF73 (YGL066W); ancestral locus Anc_6.218
YALI1_C07239g	Truncated form of YALI0C05665g, similar to Saccharomyces cerevisiae BMH2 (YDR099W) and BMH1 (YER177W); ancestral locus Anc_8.243, uniprot|Q876L9 Yarrowia lipolytica 14-3-3 protein Bmh2
YALI1_C07288g	Compare to YALI0C05687g, similar to uniprot|Q6C2W3 Yarrowia lipolytica YALI0F04620g
YALI1_C07360g	Compare to YALI0C05709g, weakly similar to uniprot|P18544 Saccharomyces cerevisiae YOL140w ARG8 acetylornithine aminotransferase hypothetical
YALI1_C07397g	Compare to YALI0C05731g, no similarity
YALI1_C07423g	Compare to YALI0C05753g, highly similar to DEHA0B09460g Debaryomyces hansenii IPF 9880.1 similarity to mitochondrial phosphate carrier protein
YALI1_C07451g	Compare to YALI0C05775g, similar to Saccharomyces cerevisiae PEX13 (YLR191W); ancestral locus Anc_7.365, similar to uniprot|Q92266 Pichia pastoris Peroxisomal membrane protein PEX13 (Peroxin-13)
YALI1_C07481g	Compare to YALI0C05797g, no similarity
YALI1_C07495g	Compare to YALI0C05819g, some similarities with uniprot|P14906 Saccharomyces cerevisiae YOR254c SEC63 ER protein-translocation complex subunit
YALI1_C07519g	Compare to YALI0C05841g, no similarity
YALI1_C07534g	Compare to YALI0C05863g, no similarity
YALI1_C07562g	Compare to YALI0C05885g, similar to uniprot|Q8S564 Glycine max 4- coumarate:coenzyme A ligase (EC 6.2.1.12)
YALI1_C07592g	Compare to YALI0C05907g, no similarity
YALI1_C07613g	Compare to YALI0C05929g, similar to Saccharomyces cerevisiae YJR129C; ancestral locus Anc_4.352, weakly similar to uniprot|P47163 Saccharomyces cerevisiae YJR129c
YALI1_C07638g	Compare to YALI0C05951g, similar to uniprot|Q12618 Ajellomyces capsulata Delta-9 fatty acid desaturase (EC 1.14.99.5) (Acyl-CoA desaturase) (Stearoyl-CoA desaturase) (Delta(9)- desaturase)
YALI1_C07670g	Compare to YALI0C05973g, no similarity
YALI1_C07721g	Compare to YALI0C05995g, weakly similar to uniprot|Q9P6Z0 Neurospora crassa Conserved hypothetical protein
YALI1_C07758g	Compare to YALI0C06017g, no similarity
YALI1_C07770g	Compare to YALI0C06039g, similar to uniprot|P21243 Saccharomyces cerevisiae YGL011c SCL1 20S proteasome subunit YC7ALPHA/Y8
YALI1_C07780g	Compare to YALI0C06061g, similar to uniprot|P53096 Saccharomyces cerevisiae YGL194c HOS2 putative histone deacetylase
YALI1_C07816g	Compare to YALI0C06083g, similar to uniprot|Q9Y8A4 Aspergillus oryzae 5- aminolevulinic acid synthase (HEM1p homologue), similar to Saccharomyces cerevisiae HEM1 (YDR232W); ancestral locus Anc_8.453
YALI1_C07894g	Compare to YALI0C06105g, weakly similar to uniprot|O74395 Schizosccharomyces pombe MFS efflux transporter of unknown specificity
YALI1_C07948g	Compare to YALI0C06127g, weakly similar to uniprot|Q06497 Saccharomyces cerevisiae YPR128c similarity to carrier protein FLX1, similar to Saccharomyces cerevisiae ANT1 (YPR128C); ancestral locus Anc_3.463
YALI1_C07979g	Compare to YALI0C06149g, similar to uniprot|P14682 Saccharomyces cerevisiae YDR054C Ubiquitin-conjugating enzyme E2-34 kDa (EC 6.3.2. 19) (Ubiquitin-protein ligase) (Cell division control protein 34), similar to Saccharomyces cerevisiae CDC34 (YDR054C); ancestral locus Anc_3.301
YALI1_C08017g	Compare to YALI0C06171g, similar to uniprot|Q884Q9 Pseudomonas syringae Oxidoreductase zinc-binding, similar to Saccharomyces cerevisiae YML131W
YALI1_C08040g	Compare to YALI0C06193g, similar to uniprot|Q06170 Saccharomyces cerevisiae YLR326w hypothetical protein, similar to Saccharomyces cerevisiae YLR326W; ancestral locus Anc_4.144
YALI1_C08065g	Compare to YALI0C06215g, similar to Saccharomyces cerevisiae DRE2 (YKR071C); ancestral locus Anc_5.654, similar to uniprot|Q871G3 Neurospora crassa B7H23. 180 Hypothetical protein
YALI1_C08106g	Compare to YALI0C06237g, similar to Saccharomyces cerevisiae STF2 (YGR008C) and TMA10 (YLR327C); ancestral locus Anc_4.146, weakly similar to uniprot|Q06177 Saccharomyces cerevisiae YLR327c strong similarity to STF2P P2.246.f2.1
YALI1_C08151g	Compare to YALI0C06259g, no similarity
YALI1_C08173g	Compare to YALI0C06281g, similar to uniprot|Q12600 Candida tropicalis SIS2 protein (Halotolerance protein HAL3)
YALI1_C08197g	Compare to YALI0C06303g, weakly similar to uniprot|P33412 Saccharomyces cerevisiae YGR007w MUQ1 choline phosphate cytidylyltransferase, similar to Saccharomyces cerevisiae MUQ1 (YGR007W); ancestral locus Anc_4.145
YALI1_C08218g	Compare to YALI0C06325g, weakly similar to uniprot|Q8Y6B4 Listeria monocytogenes Hypothetical protein
YALI1_C08242g	Compare to YALI0C06347g, similar to Saccharomyces cerevisiae MON1 (YGL124C); ancestral locus Anc_6.127, similar to uniprot|Q870Q4 Neurospora crassa B1D14. 310 Hypothetical protein
YALI1_C08262g	Compare to YALI0C06369g, highly similar to uniprot|Q9Y796 Cryptococcus curvatus Glyceraldehyde 3-phosphate dehydrogenase (EC 1.2. 1.12) (GAPDH)
YALI1_C08298g	Compare to YALI0C06391g, weakly similar to uniprot|Q02817 Homo sapiens Mucin 2 precursor putative adhesion protein
YALI1_C08523g	Compare to YALI0C06424g, similar to uniprot|P10870 Saccharomyces cerevisiae YDL194w SNF3 high-affinity glucose transporter/regulatory protein
YALI1_C08548g	Compare to YALI0C06446g, similar to uniprot|P46681 Saccharomyces cerevisiae YDL178W Actin interacting protein 2
YALI1_C08600g	Compare to YALI0C06460g, some similarities with uniprot|O94186 Pneumocystis carinii Mitotic inducer phosphatase Cdc25
YALI1_C08702g	Compare to YALI0C06490g, highly similar to uniprot|O93827 Candida albicans CaPSA1 Mannose-1-phosphate guanyltransferase (EC 2.7.7.13), similar to Saccharomyces cerevisiae PSA1 (YDL055C); ancestral locus Anc_4.231
YALI1_C08748g	Compare to YALI0C06512g, no similarity, weakly similar to uniprot|P39709 Saccharomyces cerevisiae YAL067c SEO1 suppressor of sulfoxyde ethionine resistance
YALI1_C08791g	Compare to YALI0C06556g, similar to uniprot|Q8WZU4 Neurospora crassa Conserved hypothetical protein, similar to Saccharomyces cerevisiae YLR352W; ancestral locus Anc_4.185
YALI1_C08834g	Compare to YALI0C06578g, similar to uniprot|Q874I3 Candida albicans H+/nucleoside cotransporter
YALI1_C08882g	Compare to YALI0C06600g, similar to Saccharomyces cerevisiae YBL107C; ancestral locus Anc_7.443, weakly similar to uniprot|P38162 Saccharomyces cerevisiae YBL107c hypothetical protein
YALI1_C08893g	Compare to YALI0C06622g, no similarity
YALI1_C08922g	Compare to YALI0C06644g, similar to ca|CA0882|CaPHR3 Candida albicans surface glycoprotein (by homology)
YALI1_C08952g	Compare to YALI0C06710g, no similarity
YALI1_C08983g	Compare to YALI0C06732g, weakly similar to uniprot|Q8X0A9 Neurospora crassa Conserved hypothetical protein, similar to Saccharomyces cerevisiae YDR428C; ancestral locus Anc_5.535
YALI1_C09009g	Compare to YALI0C06754g, weakly similar to uniprot|Q96U38 Neurospora crassa Conserved hypothetical protein
YALI1_C09033g	Compare to YALI0C06776g, highly similar to uniprot|P55250 Rhizopus oryzae Fumarate hydratase mitochondrial precursor (EC 4.2.1.2) (Fumarase), similar to Saccharomyces cerevisiae FUM1 (YPL262W); ancestral locus Anc_6.13
YALI1_C09072g	Compare to YALI0C06798g, similar to uniprot|P32775 Saccharomyces cerevisiae YEL011w GLC3 1 4-glucan branching enzyme (glycogen branching enzyme)
YALI1_C09094g	Compare to YALI0C06820g, highly similar to uniprot|P49626 Saccharomyces cerevisiae YDR012W 60S ribosomal protein L4-B (L2B) (RP2), similar to Saccharomyces cerevisiae RPL4A (YBR031W) and RPL4B (YDR012W); ancestral locus Anc_3.232
YALI1_C09133g	Truncated form of YALI0C06842g, similar to uniprot|P11746 Saccharomyces cerevisiae YMR043W Pheromone receptor transcription factor (GRM/PRTF protein)
YALI1_C09150g	Compare to YALI0C06853g, gnl|GLV|YALI0C06853g [Yarrowia lipolytica] no similarity
YALI1_C09200g	Compare to YALI0C06864g, weakly similar to DEHA0F13706g Debaryomyces hansenii IPF 8049.1
YALI1_C09230g	Compare to YALI0C06886g, highly similar to uniprot|P19211 Saccharomyces cerevisiae YJR047c ANB1 translation initiation factor eIF5A.2 P2.324.f2.1, similar to Saccharomyces cerevisiae HYP2 (YEL034W) and ANB1 (YJR047C); ancestral locus Anc_1.478
YALI1_C09260g	Compare to YALI0C06908g, no similarity
YALI1_C09285g	Compare to YALI0C06930g, weakly similar to uniprot|Q96VT0 Agrocybe pediades Phytase precursor (strong similarity to acid phosphatase)
YALI1_C09308g	Compare to YALI0C06952g, highly similar to uniprot|P32449 Saccharomyces cerevisiae YBR249C Phospho-2-dehydro-3-deoxyheptonate aldolase tyrosine-inhibited (EC 4.1.2.15) (Phospho-2-keto- 3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D- arabino-heptulosonate 7-phosphate synthase
YALI1_C09343g	Compare to YALI0C06974g, similar to Saccharomyces cerevisiae SAM50 (YNL026W); ancestral locus Anc_2.304, weakly similar to uniprot|Q10478 Schizosaccharomyces pombe Hypothetical protein C17C9.06 in chromosome I
YALI1_C09380g	Compare to YALI0C06996g, similar to DEHA0A10175g Debaryomyces hansenii IPF 7084.1, similar to Saccharomyces cerevisiae YIL083C; ancestral locus Anc_2.305
YALI1_C09390g	Compare to YALI0C07018g, similar to uniprot|Q9GP41 Echinococcus multilocularis Putative U-snRNP-associated cyclophilin (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (CPH1 cyclophilin)
YALI1_C09415g	Compare to YALI0C07040g, similar to Saccharomyces cerevisiae PUB1 (YNL016W); ancestral locus Anc_2.306, weakly similar to uniprot|P32588 Saccharomyces cerevisiae YNL016w Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 (ARS consensus binding protein ACBP-60) (Poly(U)-binding protein)
YALI1_C09451g	Compare to YALI0C07062g, weakly similar to uniprot|P39715 Saccharomyces cerevisiae YAL059w SIM1 involved in cell wall biosynthesis
YALI1_C09467g	Compare to YALI0C07128g, similar to Saccharomyces cerevisiae HIS7 (YBR248C); ancestral locus Anc_6.167, similar to uniprot|P33734 Saccharomyces cerevisiae YBR248C Imidazole glycerol phosphate synthase hisHF (IGP synthase) (ImGP synthase) (IGPS) [Includes: Glutamine amidotransferase (EC 2.4.2.-)
YALI1_C09489g	Compare to YALI0C07150g, similar to uniprot|Q06554 Saccharomyces cerevisiae YLR247c similarity to S.pombe rad8 protein and RDH54P
YALI1_C09552g	Compare to YALI0C07172g, weakly similar to uniprot|O01761 Caenorhabditis elegans Muscle M-line assembly protein unc-89 (Uncoordinated protein 89)
YALI1_C09606g	Compare to YALI0C07194g, weakly similar to uniprot|Q872Z4 Neurospora crassa B23B10.030 Related to monocarboxylate transporter
YALI1_C09639g	Compare to YALI0C07238g, no similarity
YALI1_C09642g	Compare to YALI0C07260g, some similarities with uniprot|Q12083 Saccharomyces cerevisiae Chromosome XVI reading frame ORF YPL164C, similar to Saccharomyces cerevisiae MLH3 (YPL164C); ancestral locus Anc_8.688
YALI1_C09667g	Compare to YALI0C07282g, no similarity
YALI1_C09696g	Compare to YALI0C07304g, some similarities with DEHA0F09273g Debaryomyces hansenii, similar to Saccharomyces cerevisiae GDT1 (YBR187W); ancestral locus Anc_8.557
YALI1_C09718g	Compare to YALI0C07326g, weakly similar to uniprot|O14249 Schizosaccharomyces pombe Hypothetical protein C6G10.03c in chromosome I
YALI1_C09750g	Compare to YALI0C07348g, similar to uniprot|O43000 Schizosaccharomyces pombe Probable transporter LIZ1
YALI1_C09773g	Compare to YALI0C07414g, similar to uniprot|Q9P7B4 Schizosaccharomyces pombe Putative short chain dehydrogenase
YALI1_C09781t	Full length Line element
YALI1_C09803t	Full length Line element
YALI1_C09851g	Compare to YALI0C07436g, similar to uniprot|P87175 Schizosaccharomyces pombe DNA- (apurinic or apyrimidinic site) lyase (EC 4.2.99.18)
YALI1_C09885g	ancestral locus Anc_1.120,Mating Type A Protein
YALI1_C09923g	Truncated form of YALI0C07502g, uniprot|O94097 Yarrowia lipolytica Sla2p cytoskeleton assembly control protein, similar to Saccharomyces cerevisiae SLA2 (YNL243W); ancestral locus Anc_1.119
YALI1_C09950g	Truncated form of YALI0C07524g, similar to uniprot|P32911 Saccharomyces cerevisiae YNL244c SUI1 translation initiation factor 3 (eIF3), similar to Saccharomyces cerevisiae SUI1 (YNL244C); ancestral locus Anc_1.118
YALI1_C09977g	Compare to YALI0C07546g, similar to KLLA0C00286g Kluyveromyces lactis IPF 6789.1
YALI1_C10016g	Compare to YALI0C07568g, similar to Saccharomyces cerevisiae YPR091C; ancestral locus Anc_3.402, weakly similar to uniprot|Q06833 Saccharomyces cerevisiae YPR091C Similar in central region to C. ELEGANS hypothetical protein F55C12.5
YALI1_C10041g	Compare to YALI0C07590g, similar to uniprot|Q9RA92 Sinorhizobium sp. ArsB
YALI1_C10121g	Compare to YALI0C07612g, no similarity
YALI1_C10173g	Compare to YALI0C07634g, no similarity
YALI1_C10203g	Compare to YALI0C07656g, weakly similar to DEHA0D03410g Debaryomyces hansenii
YALI1_C10232g	Compare to YALI0C07678g, similar to uniprot|P38090 Saccharomyces cerevisiae YBR132C General amino acid permease AGP2
YALI1_C10271g	Compare to YALI0C07700g, similar to Saccharomyces cerevisiae YHL010C; ancestral locus Anc_2.542, similar to KLLA0F25740g Kluyveromyces lactis IPF 168.1
YALI1_C10293g	Compare to YALI0C07722g, weakly similar to uniprot|P38124 Saccharomyces cerevisiae YBR008c FLR1 fluconazole resistance protein
YALI1_C10318g	Compare to YALI0C07744g, no similarity
YALI1_C10345g	Compare to YALI0C07777g, no similarity
YALI1_C10385g	Compare to YALI0C07821g, weakly similar to uniprot|Q9C2Q2 Neurospora crassa Related to transcription activator amyR
YALI1_C10463g	Compare to YALI0C07843g, similar to uniprot|Q872S8 Neurospora crassa B8B8. 060 Hypothetical protein
YALI1_C10480g	Compare to YALI0C07865g, similar to Saccharomyces cerevisiae YNL024C; ancestral locus Anc_2.289, weakly similar to uniprot|O13926 Schizosaccharomyces pombe Hypothetical protein
YALI1_C10492g	Compare to YALI0C07887g, similar to Saccharomyces cerevisiae MRPS17 (YMR188C); ancestral locus Anc_6.275, similar to uniprot|Q03246 Saccharomyces cerevisiae Putative mitochondrial 40S ribosomal protein YMR188C
YALI1_C10497g	Compare to YALI0C07909g, similar to Saccharomyces cerevisiae YMR185W; ancestral locus Anc_6.266, weakly similar to DEHA0D11330g Debaryomyces hansenii
YALI1_C10534g	Compare to YALI0C07931g, weakly similar to uniprot|Q9NXS3 Homo sapiens Hypothetical protein FLJ20081
YALI1_C10555g	Compare to YALI0C07953g, highly similar to uniprot|P46598 Candida albicans CaHSC82 Heat shock protein 90 homolog, similar to Saccharomyces cerevisiae HSC82 (YMR186W) and HSP82 (YPL240C); ancestral locus Anc_6.267
YALI1_C10591t	Full length Line element
YALI1_C10612t	Full length Line element
YALI1_C10675g	Compare to YALI0C07975g, some similarities with uniprot|Q7RXW6 Neurospora crassa NCU01465.1 hypothetical protein, similar to Saccharomyces cerevisiae SYT1 (YPR095C); ancestral locus Anc_3.407
YALI1_C10718g	Compare to YALI0C08030g, similar to Saccharomyces cerevisiae RDS3 (YPR094W); ancestral locus Anc_3.406, similar to uniprot|Q7RZL7 Neurospora crassa NCU00348.1 conserved hypothetical protein
YALI1_C10730g	Compare to YALI0C08052g, similar to uniprot|P10962 Saccharomyces cerevisiae YAL025c MAK16 nuclear viral propagation protein, similar to Saccharomyces cerevisiae MAK16 (YAL025C); ancestral locus Anc_7.73
YALI1_C10762g	Compare to YALI0C08074g, highly similar to uniprot|O93968 Candida boidinii Formate dehydrogenase
YALI1_C10787g	Truncated form of YALI0C08096g, some similarities with AN3445 2 Aspergillus nudulans predicted protein
YALI1_C10806g	Truncated form of YALI0C08096g, some similarities with AN3445 2 Aspergillus nudulans predicted protein
YALI1_C10860g	Compare to YALI0C08118g, similar to Saccharomyces cerevisiae RVS161 (YCR009C); ancestral locus Anc_1.424, highly similar to uniprot|Q9UUM7 Schizosaccharomyces pombe Protein hob3 (Homolog of Bin3)
YALI1_C10990g	Compare to YALI0C08140g, no similarity
YALI1_C11077g	Compare to YALI0C08184g, weakly similar to uniprot|Q6C3D5 Yarrowia lipolytica YALI0F00616g
YALI1_C11096g	Compare to YALI0C08206g, similar to Saccharomyces cerevisiae SAS4 (YDR181C); ancestral locus Anc_8.382, no similarity
YALI1_C11100g	Compare to YALI0C08220g, some similarities with uniprot|P25618 Saccharomyces cerevisiae YCR017c putative sensor/transporter protein
YALI1_C11131g	Compare to YALI0C08228g, similar to uniprot|P47159 Saccharomyces cerevisiae YJR124c putative Multidrug-efflux transporter
YALI1_C11203g	Converted to coding from non-coding YALI0C08250g, similar to uniprot|Q6CD99 Yarrowia lipolytica YALI0C02519g
YALI1_C11234g	Compare to YALI0C08283g, weakly similar to uniprot|Q9Y776 Candida tropicalis Secreted aspartic protease 4
YALI1_C11271g	Compare to YALI0C08305g, similar to Saccharomyces cerevisiae MEK1 (YOR351C); ancestral locus Anc_7.41, highly similar to uniprot|P06245 Saccharomyces cerevisiae YPL203w TPK2 cAMP-dependent protein kinase 2 catalytic chain
YALI1_C11441g	Compare to YALI0C08349g, similar to uniprot|Q6C4Z0 Yarrowia lipolytica YALI0E22550g
YALI1_C11501g	Compare to YALI0C08371g, weakly similar to uniprot|P16151 Saccharomyces cerevisiae YDR414c ERD1 required for retention of luminal ER proteins, similar to Saccharomyces cerevisiae ERD1 (YDR414C); ancestral locus Anc_5.515
YALI1_C11521g	Compare to YALI0C08393g, weakly similar to uniprot|Q871S2 Neurospora crassa NCU06697.1 hypothetical protein
YALI1_C11552g	Compare to YALI0C08415g, similar to uniprot|Q6CCH8 Yarrowia lipolytica YALI0C09240g
YALI1_C11581g	Truncated form of YALI0C08437g, no similarity
YALI1_C11589g	Compare to YALI0C08459g, weakly similar to uniprot|Q9UTQ4 Schizosaccharomyces pombe Putative oxidoreductase,ancestral locus Anc_3.439
YALI1_C11694g	Truncated form of YALI0C08473g, weakly similar to uniprot|P08640 Saccharomyces cerevisiae YIR019c STA1 extracellular alpha-1 4-glucan glucosidase
YALI1_C11715g	Compare to YALI0C08481g, similar to uniprot|P40986 Saccharomyces cerevisiae YDR182w CDC1 cell division control protein, similar to Saccharomyces cerevisiae CDC1 (YDR182W); ancestral locus Anc_8.383
YALI1_C11744g	Compare to YALI0C08547g, similar to uniprot|P43092 Candida albicans Candidapepsin 3 precursor (Aspartate protease 3)
YALI1_C11773g	Compare to YALI0C08569g, similar to uniprot|Q86ZH9 Neurospora crassa Related to tartrate transporters
YALI1_C11819g	Truncated form of YALI0C08591g, some similarities with uniprot|P53253 Saccharomyces cerevisiae YGR089w, similar to Saccharomyces cerevisiae NNF2 (YGR089W); ancestral locus Anc_3.425
YALI1_C11836g	Compare to YALI0C08613g, similar to uniprot|Q6C6I7 Yarrowia lipolytica YALI0E09218g
YALI1_C11862g	Compare to YALI0C08635g, similar to uniprot|P87216 Schizosaccharomyces pombe VIP1 protein (P53 antigen homolog)
YALI1_C11883g	Compare to YALI0C08657g, similar to uniprot|Q03264 Saccharomyces cerevisiae YMR285c, similar to Saccharomyces cerevisiae NGL3 (YML118W) and NGL2 (YMR285C); ancestral locus Anc_8.850
YALI1_C11902g	Compare to YALI0C08679g, no similarity
YALI1_C11925g	Compare to YALI0C08701g, weakly similar to uniprot|O94395 Schizosaccharomyces pombe Putative ATP-dependent DNA helicase and to uniprot|P32807 Saccharomyces cerevisiae YMR284w HDF1 high-affinity DNA- binding protein, similar to Saccharomyces cerevisiae YKU70 (YMR284W); ancestral locus Anc_8.849
YALI1_C11930g	Compare to YALI0C08723g, similar to Saccharomyces cerevisiae MRPL33 (YMR286W); ancestral locus Anc_8.851, similar to uniprot|P20084 Saccharomyces cerevisiae YMR286W Mitochondrial 60S ribosomal protein L33 (YmL33)
YALI1_C11954g	Compare to YALI0C08745g, no similarity
YALI1_C11970g	Compare to YALI0C08767g, similar to Saccharomyces cerevisiae CIN1 (YOR349W); ancestral locus Anc_7.43, weakly similar to uniprot|Q28205 Bos taurus Cofactor D involved in protein folding
YALI1_C12007g	Compare to YALI0C08782g, similar to Saccharomyces cerevisiae BET3 (YKR068C); ancestral locus Anc_5.649, highly similar to uniprot|P36149 Saccharomyces cerevisiae YKR068C Transport protein particle 22 kDa subunit (TRAPP 22 kDa subunit)
YALI1_C12024g	Compare to YALI0C08811g, similar to uniprot|Q9K6C9 Bacillus halodurans 3- hydroxybutyryl-CoA dehydrogenase
YALI1_C12038g	Truncated form of YALI0C08833g, no similarity
YALI1_C12044t	Full length Line element
YALI1_C12066t	Full length Line element
YALI1_C12121g	Compare to YALI0C08855g, weakly similar to uniprot|P87221 Candida sp Cadmium induced CIP1 protein
YALI1_C12140g	Compare to YALI0C08877g, similar to Saccharomyces cerevisiae YGR054W; ancestral locus Anc_4.194, similar to uniprot|O74965 Schizosaccharomyces pombe Hypothetical 63.5 kDa protein
YALI1_C12170g	Compare to YALI0C08899g, similar to uniprot|Q9Y776 Candida tropicalis Secreted aspartic protease 4
YALI1_C12194g	Compare to YALI0C08921g, no similarity
YALI1_C12220g	Compare to YALI0C08943g, similar to uniprot|P10870 Saccharomyces cerevisiae YDL194w SNF3 high-affinity glucose transporter/regulatory protein
YALI1_C12282g	Compare to YALI0C08960g, similar to Saccharomyces cerevisiae ESP1 (YGR098C); ancestral locus Anc_3.441, some similarities with uniprot|Q03018 Saccharomyces cerevisiae YGR098c ESP1 required for sister chromatid separation
YALI1_C12317g	Compare to YALI0C08965g, no similarity
YALI1_C12333g	Compare to YALI0C08987g, similar to uniprot|P15705 Saccharomyces cerevisiae YOR027W Heat shock protein STI1
YALI1_C12406g	Compare to YALI0C09009g, some similarities with uniprot|Q9C2Q2 Neurospora crassa Related to transcription activator amyR
YALI1_C12513g	Truncated form of YALI0C09031g, weakly similar to uniprot|Q6CCL1 Yarrowia lipolytica YALI0C08473g
YALI1_C12570t	Partial Line element
YALI1_C12619g	Compare to YALI0C09119g, similar to uniprot|P14065 Saccharomyces cerevisiae YOR120W GCY protein
YALI1_C12642g	Compare to YALI0C09141g, uniprot|O59949 Yarrowia lipolytica Elongation factor 1- alpha (EF-1-alpha), similar to Saccharomyces cerevisiae TEF2 (YBR118W) and TEF1 (YPR080W); ancestral locus Anc_3.378
YALI1_C12695g	Compare to YALI0C09163g, weakly similar to uniprot|O59745 Schizosaccharomyces pombe Hypothetical 33.4 kDa protein, similar to Saccharomyces cerevisiae MRL1 (YPR079W); ancestral locus Anc_3.377
YALI1_C12725g	Compare to YALI0C09185g, weakly similar to uniprot|P41813 Saccharomyces cerevisiae YNL068C Fork head protein homolog 2, similar to Saccharomyces cerevisiae FKH1 (YIL131C) and FKH2 (YNL068C); ancestral locus Anc_2.230
YALI1_C12788g	Compare to YALI0C09218g, similar to Saccharomyces cerevisiae RPL16A (YIL133C) and RPL16B (YNL069C); ancestral locus Anc_2.228, similar to uniprot|P26784 Saccharomyces cerevisiae YIL133C 60S ribosomal protein L16-A (L13A) (RP22)
YALI1_C12845g	Compare to YALI0C09232g, some similarities with uniprot|Q12427 Saccharomyces cerevisiae YDR169c STB3 SIN3 protein-binding protein, similar to Saccharomyces cerevisiae STB3 (YDR169C); ancestral locus Anc_8.363
YALI1_C12883g	Compare to YALI0C09240g, some similarities with uniprot|Q86JZ0|emb|AAO51355 Dictyostelium discoideum Hypothetical protein
YALI1_C12900g	Compare to YALI0C09262g, weakly similar to uniprot|P39015 Saccharomyces cerevisiae YLR150w MPT4 specific affinity for guanine-rich quadruplex nucleic acids, similar to Saccharomyces cerevisiae STM1 (YLR150W); ancestral locus Anc_8.364
YALI1_C12941g	Compare to YALI0C09284g, some similarities with uniprot|P38137 Saccharomyces cerevisiae YBR222c PCS60 AMP-binding protein peroxisomal, similar to Saccharomyces cerevisiae ACS2 (YLR153C); ancestral locus Anc_8.367
YALI1_C13000g	Compare to YALI0C09328g, similar to uniprot|Q12118 Saccharomyces cerevisiae YOR007c SGT2 similarity to protein phosphatases
YALI1_C13007g	Compare to YALI0C09350g, similar to Saccharomyces cerevisiae COX20 (YDR231C); ancestral locus Anc_8.451, weakly similar to uniprot|Q04935 Saccharomyces cerevisiae YDR231c COX20 in the maturation and assembly of cytochrome oxidase involved protein
YALI1_C13026g	Compare to YALI0C09372g, no similarity
YALI1_C13038g	Compare to YALI0C09394g, no similarity, similar to Saccharomyces cerevisiae YPL034W; ancestral locus Anc_2.378
YALI1_C13093g	Compare to YALI0C09438g, weakly similar to uniprot|P50102 Saccharomyces cerevisiae YMR223W Ubp8p deubiquinating enzyme
YALI1_C13106g	Compare to YALI0C09460g, similar to Saccharomyces cerevisiae TAH18 (YPR048W); ancestral locus Anc_3.329, similar to uniprot|Q12181 Saccharomyces cerevisiae YPR048W TAH18 protein
YALI1_C13162g	Compare to YALI0C09482g, some similarities with uniprot|Q9C2Q2 Neurospora crassa Related to transcription activator amyR
YALI1_C13186g	Compare to YALI0C09504g, similar to CA1756|IPF14562 Candida albicans unknown function
YALI1_C13227g	Compare to YALI0C09526g, similar to Saccharomyces cerevisiae SRO9 (YCL037C) and SLF1 (YDR515W); ancestral locus Anc_1.36, weakly similar to uniprot|P25567 Saccharomyces cerevisiae YCL037c SRO9 La motif-containing proteins that modulate mRNA translation
YALI1_C13241g	Compare to YALI0C09548g, similar to Saccharomyces cerevisiae ACN9 (YDR511W); ancestral locus Anc_1.44, similar to uniprot|Q8X1Y8 Kluyveromyces lactis Hypothetical 15.0 kDa protein (Fragment)
YALI1_C13261g	Compare to YALI0C09570g, some similarities with uniprot|P04397 Saccharomyces cerevisiae YBR019c GAL10 UDP-glucose 4-epimerase
YALI1_C13284g	Compare to YALI0C09592g, weakly similar to uniprot|Q7SF01 Neurospora crassa NCU07454.1 predicted protein 102740 - 103375)
YALI1_C13302g	Compare to YALI0C09614g, no similarity
YALI1_C13355g	Compare to YALI0C09636g, similar to Saccharomyces cerevisiae ILV6 (YCL009C); ancestral locus Anc_1.411, similar to uniprot|P25605 Saccharomyces cerevisiae YCL009C Acetolactate synthase small subunit(mitochondrial precursor)
YALI1_C13410g	Compare to YALI0C09658g, some similarities with uniprot|Q04740 Saccharomyces cerevisiae YMR234w RNH1 ribonuclease H
YALI1_C13453g	Compare to YALI0C09680g, similar to uniprot|P53301 Saccharomyces cerevisiae YGR189c CRH1 family of putative glycosidases might exert a common role in cell wall organization
YALI1_C13506g	Converted to coding from non-coding YALI0C09702g, no similarity frameshift
YALI1_C13522g	Compare to YALI0C09735g, similar to uniprot|P40185 Saccharomyces cerevisiae YIL051C MMF1 protein mitochondrial precursor (Maintenance of mitochondrial function 1) (Isoleucine biosynthesis and maintenance of intact mitochondria 1)
YALI1_C13560g	Compare to YALI0C09757g, weakly similar to uniprot|P53540 Saccharomyces cerevisiae YNL126w SPC98 spindle pole body component, similar to Saccharomyces cerevisiae SPC98 (YNL126W); ancestral locus Anc_2.144
YALI1_C13642g	Compare to YALI0C09779g, weakly similar to uniprot|P53917 Saccharomyces cerevisiae YNL127w FAR11 Hypothetical 109.8kDa protein, similar to Saccharomyces cerevisiae FAR11 (YNL127W); ancestral locus Anc_2.143
YALI1_C13652g	Compare to YALI0C09801g, similar to uniprot|P47081 Saccharomyces cerevisiae YJL003W Hypothetical 14.1 kDa protein in CYR1-OST1 intergenic region, similar to Saccharomyces cerevisiae COX16 (YJL003W); ancestral locus Anc_5.212
YALI1_C13689g	Compare to YALI0C09823g, similar to CA1963|IPF14040 Candida albicans probable transporter (by homology)
YALI1_C13726g	Compare to YALI0C09845g, weakly similar to uniprot|Q7RY47 Neurospora crassa NCU04516.1 predicted protein
YALI1_C13768g	Compare to YALI0C09889g, similar to uniprot|P19145 Saccharomyces cerevisiae YKR039W General amino-acid permease GAP1
YALI1_C13817g	Compare to YALI0C09904g, no similarity
YALI1_C13856g	Truncated form of YALI0C09933g, weakly similar to uniprot|P35732 Saccharomyces cerevisiae YKL054c VID31 similarity to glutenin high molecular weight chain proteins and SNF5P
YALI1_C13879g	Compare to YALI0C09966g, no similarity
YALI1_C13890g	Compare to YALI0C09988g, similar to uniprot|P18253 Schizosaccharomyces pombe Peptidyl-prolyl cis-trans isomerase
YALI1_C13973g	Compare to YALI0C10010g, weakly similar to uniprot|Q9I1Z7 Pseudomonas aeruginosa O6-methylguanine-DNA methyltransferase
YALI1_C14079g	Compare to YALI0C10032g, similar to uniprot|Q2I041 Saccharomyces cerevisiae YMR167W MLH1 Protein required for mismatch repair in mitosis and meiosis as well as crossing over during meiosis
YALI1_C14106g	Compare to YALI0C10054g, similar to uniprot|O74128 Yarrowia lipolytica ALK2
YALI1_C14125g	Compare to YALI0C10076g, no similarity
YALI1_C14169g	Compare to YALI0C10098g, similar to Saccharomyces cerevisiae DID2 (YKR035W-A); ancestral locus Anc_1.249, similar to uniprot|P69771 Saccharomyces cerevisiae YKR035W-A class E vacuolar-protein sorting and endocytosis factor
YALI1_C14183g	Compare to YALI0C10120g, no similarity
YALI1_C14228g	Compare to YALI0C10135g, gnl|GLV|YALI0C10135g [Yarrowia lipolytica] similar to uniprot|Q12303 Saccharomyces cerevisiae Putative aspartyl protease YLR121C precursor
YALI1_C14273g	Compare to YALI0C10142g, no similarity
YALI1_C14369g	Compare to YALI0C10208g, weakly similar to CA2947|IPF6298 Candida albicans unknown function
YALI1_C14450g	Compare to YALI0C10230g, highly similar to uniprot|P14832 Saccharomyces cerevisiae YDR155C Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase)(Cyclophilin) (Cyclosporin A- binding protein) (CPH)(PPI-II)
YALI1_C14498g	Compare to YALI0C10252g, similar to uniprot|P43585 Saccharomyces cerevisiae YFL004w VTC2 putative polyphosphate synthetase
YALI1_C14500g	Compare to YALI0C10274g, no similarity
YALI1_C14516g	similar to Saccharomyces cerevisiae SMX2 (YFL017W-A); ancestral locus Anc_8.57
YALI1_C14543g	Ty like retrotransposon
YALI1_C14595g	Truncated form of YALI0C10311g, similar to uniprot|P50505 Debaryomyces occidentalis High affinity potassium transporter
YALI1_C14709g	Compare to YALI0C10428g, no similarity
YALI1_C14738g	Truncated form of YALI0C10450g, weakly similar to uniprot|Q04018 Saccharomyces cerevisiae YMR244w Hypothetical 37.4 kDa protein, similar to Saccharomyces cerevisiae YMR244W; ancestral locus Anc_8.793
YALI1_C14774g	Compare to YALI0C10472g, similar to Saccharomyces cerevisiae TOA1 (YOR194C); ancestral locus Anc_8.603, similar to uniprot|P32773 Saccharomyces cerevisiae YOR194c TOA1 TFIIA subunit (transcription initiation factor)
YALI1_C14787g	Compare to YALI0C10494g, similar to uniprot|P14904 Saccharomyces cerevisiae YKL103C Vacuolar aminopeptidase I precursor
YALI1_C14818g	Compare to YALI0C10516g, some similarities with uniprot|O74627 Schizosaccharomyces pombe Cyclin pch1 (Pombe cyclin c homolog 1), similar to Saccharomyces cerevisiae CTK2 (YJL006C); ancestral locus Anc_5.242
YALI1_C14823g	Compare to YALI0C10538g, no similarity
YALI1_C14843g	Converted to coding from non-coding YALI0C10560g, similar to uniprot|Q96WT5 Aspergillus oryzae Maltose permease frameshift
YALI1_C14884g	Compare to YALI0C10604g, similar to uniprot|Q96UB1 Neurospora crassa Trimethyllysine dioxygenase
YALI1_C14931g	Compare to YALI0C10626g, no similarity
YALI1_C15021g	Truncated form of YALI0C10648g, similar to Saccharomyces cerevisiae PRP8 (YHR165C); ancestral locus Anc_5.73, similar to uniprot|P33334 Saccharomyces cerevisiae YHR165c PRP8 U5 snRNP protein pre-mRNA splicing factor singleton
YALI1_C15048g	Compare to YALI0C10670g, similar to uniprot|O94343 Schizosaccharomyces pombe Putative MSF transporter
YALI1_C15077g	Compare to YALI0C10692g, similar to uniprot|P16522 Saccharomyces cerevisiae YHR166c CDC23 subunit of anaphase-promoting complex (cyclosome), similar to Saccharomyces cerevisiae CDC23 (YHR166C); ancestral locus Anc_5.72
YALI1_C15084g	Compare to YALI0C10714g, no similarity, similar to Saccharomyces cerevisiae YHR045W; ancestral locus Anc_5.287
YALI1_C15105g	Compare to YALI0C10736g, weakly similar to CA0291|IPF13328 Candida albicans unknown function, similar to Saccharomyces cerevisiae YPL041C; ancestral locus Anc_8.489
YALI1_C15115g	Compare to YALI0C10758g, no similarity
YALI1_C15180g	Compare to YALI0C10780g, similar to Saccharomyces cerevisiae ISM1 (YPL040C); ancestral locus Anc_8.488, similar to CA2103|CaISM1 Candida albicans isoleucyl- tRNA synthetase
YALI1_C15186g	Compare to YALI0C10802g, similar to Saccharomyces cerevisiae MRPL11 (YDL202W); ancestral locus Anc_8.449, some similarities with uniprot|P36521 Saccharomyces cerevisiae YDL202W 60S ribosomal protein L11 mitochondrial precursor (YmL11)
YALI1_C15201g	Compare to YALI0C10824g, weakly similar to uniprot|Q7SGT1 Neurospora crassa NCU03239.1 hypothetical protein (180563 - 181346)
YALI1_C15217g	Compare to YALI0C10846g, weakly similar to uniprot|P41834 Saccharomyces cerevisiae YOR075w UFE1 syntaxin (T-SNARE) of the ER, similar to Saccharomyces cerevisiae UFE1 (YOR075W); ancestral locus Anc_5.679
YALI1_C15263t	Compare to YALI0C10868g, Full length Line element,uniprot|Q8NIP3 Yarrowia lipolytica Reverse transcriptase
YALI1_C15284t	Compare to YALI0C10879g, Full length Line element,uniprot|Q8NIP4 Yarrowia lipolytica gag-like protein
YALI1_C15297g	Compare to YALI0C10901g, highly similar to uniprot|P06785 Saccharomyces cerevisiae YOR074c CDC21 thymidylate synthase, similar to Saccharomyces cerevisiae CDC21 (YOR074C); ancestral locus Anc_5.678
YALI1_C15322g	Compare to YALI0C10923g, weakly similar to uniprot|Q12303 Saccharomyces cerevisiae Putative aspartyl protease YLR121C precursor
YALI1_C15359g	Compare to YALI0C10945g, similar to CA0697|CaVTC4 Candida albicans CaVTC4 putative polyphosphate synthetase
YALI1_C15398g	Compare to YALI0C10967g, similar to uniprot|P39073 Saccharomyces cerevisiae YPL042c SSN3 cyclin-dependent CTD kinase
YALI1_C15420g	Compare to YALI0C10989g, similar to Saccharomyces cerevisiae EPT1 (YHR123W) and CPT1 (YNL130C); ancestral locus Anc_2.138, similar to uniprot|P17898 Saccharomyces cerevisiae YNL130C Diacylglycerol cholinephosphotransferase
YALI1_C15445g	Compare to YALI0C11011g, similar to Saccharomyces cerevisiae TOM22 (YNL131W); ancestral locus Anc_2.137, similar to uniprot|P49334 Saccharomyces cerevisiae YNL131w TOM22 mitochondrial outer membrane import receptor complex subunit
YALI1_C15465g	Compare to YALI0C11033g, some similarities with uniprot|P53916 Saccharomyces cerevisiae YNL128w TEP1, similar to Saccharomyces cerevisiae TEP1 (YNL128W); ancestral locus Anc_2.141
YALI1_C15489g	Compare to YALI0C11055g, similar to uniprot|P38828 Saccharomyces cerevisiae YHR121w, similar to Saccharomyces cerevisiae LSM12 (YHR121W); ancestral locus Anc_2.142
YALI1_C15492g	Compare to YALI0C11077g, weakly similar to uniprot|Q6CHR7 Yarrowia lipolytica YALI0A05929g
YALI1_C15526g	Converted to coding from non-coding YALI0C11099g, highly similar to uniprot|O93968 Candida boidinii Formate dehydrogenase (EC 1.2.1.2)pseudogene
YALI1_C15532g	similar to Saccharomyces cerevisiae YPL276W
YALI1_C15556g	Converted to coding from non-coding YALI0C11121g, similar to uniprot|Q6CF53 Yarrowia lipolytica YALI0B10197g no start
YALI1_C15610g	Compare to YALI0C11165g, some similarities with DEHA-IPF10888.1 Debaryomyces hansenii DEHA0E25971g, similar to Saccharomyces cerevisiae MSB2 (YGR014W); ancestral locus Anc_4.150
YALI1_C15674g	Compare to YALI0C11209g, no similarity
YALI1_C15687g	Compare to YALI0C11231g, weakly similar to uniprot|Q12341 Saccharomyces cerevisiae YPL001w HAT1 histone acetyltransferase subunit, similar to Saccharomyces cerevisiae HAT1 (YPL001W); ancestral locus Anc_8.90
YALI1_C15707g	Compare to YALI0C11253g, similar to uniprot|Q06593 Saccharomyces cerevisiae YPR194c OPT2 similarity to S.pombe isp4 protein
YALI1_C15745g	Compare to YALI0C11275g, some similarities with CA1266|CaSAP8 Candida albicans aspartic protease
YALI1_C15776g	Compare to YALI0C11297g, some similarities with uniprot|Q05521 Saccharomyces cerevisiae YDR284c DPP1 diacylglycerol pyrophosphate phosphatase
YALI1_C15803g	Compare to YALI0C11319g, no similarity
YALI1_C15832g	Compare to YALI0C11341g, highly similar to uniprot|Q12230 Saccharomyces cerevisiae Hypothetical 38.1 kDa protein YPL004C, similar to Saccharomyces cerevisiae LSP1 (YPL004C); ancestral locus Anc_8.85
YALI1_C15945g	Compare to YALI0C11363g, similar to Saccharomyces cerevisiae ECM38 (YLR299W); ancestral locus Anc_6.96, similar to uniprot|Q05902 Saccharomyces cerevisiae YLR299w ECM38 gamma-glutamyltransferase involved in glutathione synthesis
YALI1_C15964g	Compare to YALI0C11385g, highly similar to uniprot|P02309 Saccharomyces cerevisiae YNL030w HHF2 histone H4 no start
YALI1_C15991g	Compare to YALI0C11407g, similar to uniprot|Q00955 Saccharomyces cerevisiae YNR016C Acetyl-CoA carboxylase
YALI1_C16080g	Compare to YALI0C11429g, some similarities with uniprot|Q02555 Saccharomyces cerevisiae YMR239C RNT1 Ribonuclease III double-stranded ribonuclease required for 3 processing of rRNAs ans snRNAs, similar to Saccharomyces cerevisiae RNT1 (YMR239C); ancestral locus Anc_8.779
YALI1_C16091g	Compare to YALI0C11451g, some similarities with KLLA-IPF4662.1 Kluyveromyces lactis KLLA0D11000g
YALI1_C16108g	Compare to YALI0C11473g, similar to Saccharomyces cerevisiae RPS10B (YMR230W) and RPS10A (YOR293W); ancestral locus Anc_8.760, highly similar to uniprot|Q08745 Saccharomyces cerevisiae YOR293W RPS10A and highly similar to uniprot|P46784 Saccharomyces cerevisiae YMR230W RPS10B Ribosomal Protein of the Small subunit
YALI1_C16150g	Compare to YALI0C11495g, similar to Saccharomyces cerevisiae PBY1 (YBR094W); ancestral locus Anc_3.335, similar to uniprot|P38254 Saccharomyces cerevisiae YBR094w weak similarity to pig tubulin-tyrosine ligase
YALI1_C16183g	Compare to YALI0C11517g, similar to Saccharomyces cerevisiae RXT2 (YBR095C); ancestral locus Anc_3.336, similar to uniprot|P38255 Saccharomyces cerevisiae YBR095c Hypothetical 51.3 kDa protein in PHO5-VPS15 intergenic region
YALI1_C16200g	Compare to YALI0C11539g, similar to Saccharomyces cerevisiae MAK3 (YPR051W); ancestral locus Anc_3.331, similar to uniprot|Q03503 Saccharomyces cerevisiae YPR051W L-A virus GAG protein N-acetyltransferase
YALI1_C16204g	Compare to YALI0C11561g, similar to Saccharomyces cerevisiae SPT5 (YML010W); ancestral locus Anc_5.538, similar to uniprot|P27692 Saccharomyces cerevisiae YML010W Transcription initiation protein SPT5
YALI1_C16255g	Compare to YALI0C11583g, similar to uniprot|P38822 Saccharomyces cerevisiae YHR114W BZZ1 protein
YALI1_C16275g	Truncated form of YALI0C11605g, similar to Saccharomyces cerevisiae NTF2 (YER009W); ancestral locus Anc_7.155, uniprot|Q9P8H0 Yarrowia lipolytica Rph1
YALI1_C16294g	Compare to YALI0C11627g, some similarities with uniprot|CAD60585 Podospora anserina Pa5G0033
YALI1_C16305g	Compare to YALI0C11649g, weakly similar to uniprot|Q02863 Saccharomyces cerevisiae YPL072W Ubiquitin carboxyl-terminal hydrolase 16, similar to Saccharomyces cerevisiae UBP16 (YPL072W); ancestral locus Anc_8.540
YALI1_C16333g	Compare to YALI0C11671g, similar to uniprot|Q9UVL1 Candida albicans Nonhistone protein 6
YALI1_C16378g	Compare to YALI0C11693g, similar to Saccharomyces cerevisiae HES1 (YOR237W) and KES1 (YPL145C); ancestral locus Anc_8.658, similar to uniprot|P35844 Saccharomyces cerevisiae YPL145C KES1 protein (Oxysterol-binding protein homolog 4)
YALI1_C16395g	Compare to YALI0C11715g, similar to uniprot|Q09882 Schizosaccharomyces pombe Cell cycle control protein cwf13, similar to Saccharomyces cerevisiae PRP45 (YAL032C); ancestral locus Anc_7.60
YALI1_C16431g	Compare to YALI0C11781g, no similarity
YALI1_C16485g	Compare to YALI0C11803g, similar to uniprot|P00817 Saccharomyces cerevisiae YBR011c Inorganic pyrophosphatase
YALI1_C16515g	Compare to YALI0C11825g, some similarities with uniprot|Q6CC73 Yarrowia lipolytica YALI0C11836g, similar to Saccharomyces cerevisiae YBR225W; ancestral locus Anc_6.123
YALI1_C16526g	Compare to YALI0C11836g, highly similar to uniprot|Q6CC74 Yarrowia lipolytica YALI0C11825g
YALI1_C16572g	Compare to YALI0C11858g, weakly similar to uniprot|Q6C3X9 Yarrowia lipolytica YALI0E31383g
YALI1_C16621g	Compare to YALI0C11880g, similar to Saccharomyces cerevisiae RPE1 (YJL121C); ancestral locus Anc_1.234, similar to uniprot|P46969 Saccharomyces cerevisiae YJL121c POS18 Ribulose-phosphate 3-epimerase
YALI1_C16653g	Compare to YALI0C11946g, similar to Saccharomyces cerevisiae EXO70 (YJL085W); ancestral locus Anc_1.281, weakly similar to uniprot|P19658 Saccharomyces cerevisiae YJL085w EXO70 70 kDa exocyst complex protein
YALI1_C16712g	Compare to YALI0C11968g, weakly similar to KLLA0E05632g Kluyveromyces lactis IPF 3479.1
YALI1_C16770g	Compare to YALI0C12012g, similar to Saccharomyces cerevisiae NCA2 (YPR155C); ancestral locus Anc_3.502, some similarities with uniprot|Q12374 Saccharomyces cerevisiae YPR155c NCA2 control of mitochondrial synthesis of ATP6P and Atp8p
YALI1_C16851g	Compare to YALI0C12034g, similar to Saccharomyces cerevisiae YGR131W and NCE102 (YPR149W); ancestral locus Anc_3.493, similar to uniprot|Q12207 Saccharomyces cerevisiae YPR149W Protein of unknown function
YALI1_C16932g	Compare to YALI0C12056g, similar to uniprot|P53753 Saccharomyces cerevisiae YNR067c similarity to beta-glucan-elicitor receptor - Glycine max
YALI1_C16961g	Compare to YALI0C12100g, similar to DEHA0C00484g Debaryomyces hansenii IPF 2562.1
YALI1_C17031g	Compare to YALI0C12122g, uniprot|O74134 Yarrowia lipolytica ALK8 cytochrome P450
YALI1_C17050g	Compare to YALI0C12144g, similar to Saccharomyces cerevisiae APN1 (YKL114C); ancestral locus Anc_2.458, similar to uniprot|P22936 Saccharomyces cerevisiae YKL114c APN1 AP endonuclease
YALI1_C17078g	Compare to YALI0C12166g, no similarity
YALI1_C17091g	Compare to YALI0C12188g, no similarity
YALI1_C17100g	Compare to YALI0C12210g, weakly similar to uniprot|Q9P7E0 Schizosaccharomyces pombe Low similarity to ubiquinol- cytochrome c reductase complex protein, similar to Saccharomyces cerevisiae QCR10 (YHR001W-A); ancestral locus Anc_2.520
YALI1_C17163g	Compare to YALI0C12232g, weakly similar to CA3686|IPF4890 Candida albicans unknown function
YALI1_C17187g	Compare to YALI0C12254g, similar to Saccharomyces cerevisiae MMT1 (YMR177W) and MMT2 (YPL224C); ancestral locus Anc_6.248, similar to uniprot|Q08970 Saccharomyces cerevisiae YPL224c MMT2 mitochondrial iron transporter
YALI1_C17238g	Compare to YALI0C12276g, similar to Saccharomyces cerevisiae TAM41 (YGR046W); ancestral locus Anc_1.86, some similarities with uniprot|P53230 Saccharomyces cerevisiae YGR046w similarity to proline transport helper PTH1 C. albicans
YALI1_C17411g	Compare to YALI0C12342g, weakly similar to uniprot|P32832 Saccharomyces cerevisiae YMR091c NPL6 nuclear protein localization factor
YALI1_C17453g	Compare to YALI0C12364g, some similarities with uniprot|Q03125 Saccharomyces cerevisiae YDR043c NRG1 transcriptional repressor for glucose repression of STA1 gene expression
YALI1_C17566g	Compare to YALI0C12386g, similar to DEHA0F19404g Debaryomyces hansenii, similar to Saccharomyces cerevisiae MPD1 (YOR288C); ancestral locus Anc_8.750
YALI1_C17580g	Compare to YALI0C12408g, no similarity
YALI1_C17609g	Truncated form of YALI0C12430g, some similarities with uniprot|Q12232 Saccharomyces cerevisiae YOR154w, similar to Saccharomyces cerevisiae SLP1 (YOR154W); ancestral locus Anc_1.77
YALI1_C17680g	Compare to YALI0C12474g, similar to uniprot|Q99186 Saccharomyces cerevisiae YOL062C APM4 Mu2-like subunit of the clathrin associated protein complex (AP-2)
YALI1_C17700g	Compare to YALI0C12496g, weakly similar to uniprot|P36589 Schizosaccharomyces pombe Cell division control protein 14
YALI1_C17719g	Compare to YALI0C12518g, no similarity
YALI1_C17728g	Compare to YALI0C12551g, weakly similar to ca|CA1196|IPF10394 Candida albicans unknown function
YALI1_C17763g	Compare to YALI0C12573g, no similarity
YALI1_C17782g	Compare to YALI0C12595g, similar to uniprot|Q02895 Saccharomyces cerevisiae YPL088w putative aryl-alcohol dehydrogenase
YALI1_C17800g	Compare to YALI0C12617g, similar to DEHA0E14333g Debaryomyces hansenii, similar to Saccharomyces cerevisiae VTA1 (YLR181C); ancestral locus Anc_1.59
YALI1_C17820g	Compare to YALI0C12639g, similar to uniprot|P01129 Schizosaccharomyces pombe Start control protein cdc10, similar to Saccharomyces cerevisiae SWI6 (YLR182W); ancestral locus Anc_1.60
YALI1_C17848g	Compare to YALI0C12661g, uniprot|Q873M5 Yarrowia lipolytica UDP- Glc:glycoprotein glucosyltransferase, similar to Saccharomyces cerevisiae KRE5 (YOR336W); ancestral locus Anc_7.57
YALI1_C17904g	Compare to YALI0C12727g, no similarity
YALI1_C17932g	Compare to YALI0C12749g, similar to uniprot|Q12211 Saccharomyces cerevisiae YPL212c PUS1 pseudouridine synthase 1, similar to Saccharomyces cerevisiae PUS2 (YGL063W) and PUS1 (YPL212C); ancestral locus Anc_6.226
YALI1_C17947g	Compare to YALI0C12771g, similar to Saccharomyces cerevisiae DFR1 (YOR236W); ancestral locus Anc_8.657, similar to uniprot|P07807 Saccharomyces cerevisiae YOR236w DFR1 dihydrofolate reductase
YALI1_C17949g	Compare to YALI0C12793g, similar to Saccharomyces cerevisiae RPB4 (YJL140W); ancestral locus Anc_1.208, similar to uniprot|P20433 Saccharomyces cerevisiae YJL140w RPB4 DNA-directed RNA polymerase II 32 kDa subunit
YALI1_C17988g	Compare to YALI0C12859g, similar to Saccharomyces cerevisiae KAR3 (YPR141C); ancestral locus Anc_3.479, similar to uniprot|P17119 Saccharomyces cerevisiae YPR141c KAR3 kinesin-related protein
YALI1_C17995g	Compare to YALI0C12881g, similar to Saccharomyces cerevisiae RRP15 (YPR143W); ancestral locus Anc_3.480, similar to uniprot|Q06511 Saccharomyces cerevisiae YPR143w hypothetical protein
YALI1_C18011g	Compare to YALI0C12918g, similar to Saccharomyces cerevisiae CYC3 (YAL039C); ancestral locus Anc_7.38, similar to uniprot|P06182 Saccharomyces cerevisiae YAL039c CYC3 holocytochrome-c synthase (cytochrome c heme lyase)
YALI1_C18073g	Compare to YALI0C12947g, no similarity
YALI1_C18099g	Compare to YALI0C12980g, weakly similar to uniprot|Q12303 Saccharomyces cerevisiae YLR121c YPS3 GPI-anchored aspartyl protease 3 (yapsin 3)
YALI1_C18162g	Compare to YALI0C13002g, no similarity
YALI1_C18209g	Compare to YALI0C13024g, some similarities with uniprot|Q8KT00 Nitrosococcus oceani AmoA (Fragment)
YALI1_C18258g	Compare to YALI0C13090g, similar to uniprot|P04385 Saccharomyces cerevisiae YBR020w GAL1 galactokinase, similar to Saccharomyces cerevisiae GAL1 (YBR020W) and GAL3 (YDR009W); ancestral locus Anc_3.219
YALI1_C18268g	Compare to YALI0C13112g, similar to Saccharomyces cerevisiae ERV46 (YAL042W); ancestral locus Anc_7.31, similar to uniprot|P39727 Saccharomyces cerevisiae YAL042w FUN9 component of copii vesicles involved in transport between the ER and golgi complex
YALI1_C18396g	Compare to YALI0C13178g, some similarities with uniprot|P33122 Saccharomyces cerevisiae YOR344c TYE7 basic helix-loop-helix transcription factor
YALI1_C18478g	Compare to YALI0C13244g, no similarity
YALI1_C18541g	Compare to YALI0C13310g, weakly similar to uniprot|P53550 Saccharomyces cerevisiae YNL118c PSU1 suppressor protein of a yeast pet mutant, similar to Saccharomyces cerevisiae DCP2 (YNL118C); ancestral locus Anc_2.155
YALI1_C18584g	Compare to YALI0C13332g, no similarity
YALI1_C18590g	Compare to YALI0C13354g, similar to Saccharomyces cerevisiae CDC8 (YJR057W); ancestral locus Anc_1.504, similar to uniprot|P00572 Saccharomyces cerevisiae YJR057w CDC8 dTMP kinase
YALI1_C18668g	Compare to YALI0C13420g, similar to Saccharomyces cerevisiae YHR131C and YNL144C; ancestral locus Anc_2.113, weakly similar to uniprot|P38835 Saccharomyces cerevisiae YHR131c
YALI1_C18750g	Compare to YALI0C13442g, no similarity, similar to Saccharomyces cerevisiae YNL193W; ancestral locus Anc_2.57
YALI1_C18771g	Compare to YALI0C13508g, similar to uniprot|P14065 Saccharomyces cerevisiae YOR120w GCY1 galactose-induced protein of aldo/keto reductase family P6.5.f6.1 (EC 1.1.1.-)
YALI1_C18806g	Compare to YALI0C13530g, similar to uniprot|P06781 Saccharomyces cerevisiae YNL090w RHO2 GTP-binding protein of the RHO subfamily of RAS-like proteins
YALI1_C18837g	Compare to YALI0C13552g, weakly similar to uniprot|Q6C4Q3 Yarrowia lipolytica YALI0E24585g
YALI1_C18872g	Compare to YALI0C13574g, similar to uniprot|P15365 Saccharomyces cerevisiae YJR152w DAL5 allantoate permease P10.2.f3.1
YALI1_C18892g	Compare to YALI0C13596g, similar to Saccharomyces cerevisiae RRP7 (YCL031C); ancestral locus Anc_1.43, some similarities with uniprot|P25368 Saccharomyces cerevisiae YCL031c RRP7 involved in pre-rRNA processing and ribosome assembly
YALI1_C18901g	Compare to YALI0C13618g, similar to Saccharomyces cerevisiae ABD1 (YBR236C); ancestral locus Anc_6.147, weakly similar to uniprot|P32783 Saccharomyces cerevisiae YBR236c ABD1 mRNA cap methyltransferase
YALI1_C18932t	Tyl3FullLengthElement,Tyl3 Gag
YALI1_C18948t	Tyl3FullLengthElement,Tyl3 Pol
YALI1_C19005g	Compare to YALI0C13706g, similar to Saccharomyces cerevisiae RSM23 (YGL129C); ancestral locus Anc_6.227, weakly similar to uniprot|Q01163 Saccharomyces cerevisiae YGL129c RSM23
YALI1_C19123g	Truncated form of YALI0C13728g, no similarity
YALI1_C19151g	Compare to YALI0C13750g, some similarities with uniprot|P33749 Saccharomyces cerevisiae YKL062w MSN4 transcriptional activator
YALI1_C19316g	Compare to YALI0C13794g, weakly similar to uniprot|Q6C189 Yarrowia lipolytica YALI0F18326g
YALI1_C19348g	Compare to YALI0C13816g, similar to Saccharomyces cerevisiae TVP18 (YMR071C); ancestral locus Anc_2.534, some similarities with uniprot|Q04767 Saccharomyces cerevisiae YMR071c
YALI1_C19464g	Compare to YALI0C13838g, no similarity
YALI1_C19500g	Compare to YALI0C13860g, similar to uniprot|Q99383 Saccharomyces cerevisiae YOL123w HRP1(RNA3 Cleavage factor Ib) and uniprot|Q99383|NAB4_YEAST Nuclear polyadenylated RNA- binding protein NAB4, similar to Saccharomyces cerevisiae HRP1 (YOL123W); ancestral locus Anc_3.49
YALI1_C19510g	Compare to YALI0C13882g, similar to Saccharomyces cerevisiae TRM11 (YOL124C); ancestral locus Anc_3.48, similar to uniprot|Q12463 Saccharomyces cerevisiae YOL124c
YALI1_C19529g	Compare to YALI0C13904g, similar to uniprot|P23255 Saccharomyces cerevisiae YCR042c TSM1 component of TFIID complex, similar to Saccharomyces cerevisiae TAF2 (YCR042C); ancestral locus Anc_1.76
YALI1_C19636g	Compare to YALI0C13926g, weakly similar to uniprot|P24870 Saccharomyces cerevisiae YDL155w CLB3 cyclin G2/M-specific P6.2.f6.1
YALI1_C19735g	Truncated form of YALI0C13970g, weakly similar to uniprot|P08640 Saccharomyces cerevisiae YIR019c STA1 extracellular alpha-1 4-glucan glucosidase P2.341.f2.1
YALI1_C19775g	Compare to YALI0C13992g, some similarities with CA3275|IPF17068 Candida albicans IPF17068 unknown function
YALI1_C19794g	Compare to YALI0C14014g, weakly similar to uniprot|Q06508 Saccharomyces cerevisiae YPR139c, similar to Saccharomyces cerevisiae VPS66 (YPR139C); ancestral locus Anc_3.477
YALI1_C19814g	Compare to YALI0C14036g, similar to Saccharomyces cerevisiae TAZ1 (YPR140W); ancestral locus Anc_3.478, similar to uniprot|Q06510 Saccharomyces cerevisiae YPR140w similarity to human BTHS gene involved in Barth syndrome
YALI1_C19840g	Compare to YALI0C14058g, similar to Saccharomyces cerevisiae HFI1 (YPL254W); ancestral locus Anc_6.290, similar to uniprot|Q12060 Saccharomyces cerevisiae YPL254w HFI1 transcriptional coactivator
YALI1_C19866g	Compare to YALI0C14124g, weakly similar to DEHA-IPF11820.1 Debaryomyces hansenii
YALI1_C19872g	Compare to YALI0C14146g, no similarity
YALI1_C19898g	Compare to YALI0C14168g, similar to uniprot|P38555 Saccharomyces cerevisiae YER031c YPT31 GTP-binding protein of the rab family P24.2. f4.2
YALI1_C19943g	Compare to YALI0C14190g, similar to uniprot|P33336 Saccharomyces cerevisiae YGR143w SKN1 glucan synthase subunit P2.4.f2.1 and uniprot|P32486 Saccharomyces cerevisiae YPR159w KRE6 glucan synthase subunit P2.4.f2.1 associated protein
YALI1_C19981g	Compare to YALI0C14256g, similar to Saccharomyces cerevisiae PAN3 (YKL025C); ancestral locus Anc_2.669, weakly similar to uniprot|P36102 Saccharomyces cerevisiae YKL025c PAN3 component of the PAB1P-dependent poly(A) ribonuclease
YALI1_C20023g	Compare to YALI0C14322g, similar to uniprot|Q8D976 Vibrio vulnificus Uncharacterized protein conserved in bacteria
YALI1_C20054g	Compare to YALI0C14344g, highly similar to uniprot|O93968 Candida boidinii Formate dehydrogenase (EC 1.2.1.2)
YALI1_C20078g	Compare to YALI0C14388g, similar to uniprot|O74529 Schizosaccharomyces pombe Probable methyltransferase
YALI1_C20097g	Compare to YALI0C14410g, similar to Saccharomyces cerevisiae PNT1 (YOR266W); ancestral locus Anc_8.715, weakly similar to DEHA-IPF3701.1 Debaryomyces hansenii
YALI1_C20140g	Converted to coding from non-coding YALI0C14432g, similar to uniprot|O74395 Schizosaccharomyces pombe MFS efflux transporter of unknown specificity
YALI1_C20180g	Compare to YALI0C14476g, weakly similar to uniprot|P39081 Saccharomyces cerevisiae YDR228c PCF11 component of pre-mRNA 3 -end processing factor CF I, similar to Saccharomyces cerevisiae PCF11 (YDR228C); ancestral locus Anc_8.444
YALI1_C20198g	Compare to YALI0C14498g, highly similar to uniprot|P38988 Saccharomyces cerevisiae YDL198C Putative mitochondrial carrier protein YHM1/SHM1, similar to Saccharomyces cerevisiae GGC1 (YDL198C); ancestral locus Anc_8.445
YALI1_C20224g	Compare to YALI0C14520g, weakly similar to uniprot|P28321 Saccharomyces cerevisiae YKL094w
YALI1_C20255g	Compare to YALI0C14542g, similar to uniprot|Q6C6E1 Yarrowia lipolytica YALI0E10241g
YALI1_C20270g	Compare to YALI0C14564g, weakly similar to uniprot|Q04223 Saccharomyces cerevisiae YMR130w, similar to Saccharomyces cerevisiae YMR130W; ancestral locus Anc_2.404
YALI1_C20314g	Compare to YALI0C14586g, highly similar to uniprot|P40994 Saccharomyces cerevisiae YOR094w ARF3 ADP-ribosylation factor 3 P7.3.f6. 1
YALI1_C20329g	Compare to YALI0C14608g, similar to uniprot|Q9QZB9 Mus musculus Dynactin subunit P25 Dynactin 5
YALI1_C20364g	Compare to YALI0C14630g, no similarity
YALI1_C20396g	Compare to YALI0C14652g, similar to ca|CA3427|IPF11865 Candida albicans and DEHA0A11473g Debaryomyces hansenii IPF 7198.1
YALI1_C20417g	Truncated form of YALI0C14674g, no similarity
YALI1_C20429g	Compare to YALI0C14696g, no similarity
YALI1_C20452g	Compare to YALI0C14718g, weakly similar to uniprot|Q03305 Saccharomyces cerevisiae YDR465c RMT2 N-delta-arginine methyltransferase, similar to Saccharomyces cerevisiae RMT2 (YDR465C); ancestral locus Anc_5.589
YALI1_C20488g	Compare to YALI0C14740g, weakly similar to uniprot|P24814 Saccharomyces cerevisiae YJR090c GRR1 required for glucose repression and for glucose and cation transport, similar to Saccharomyces cerevisiae GRR1 (YJR090C); ancestral locus Anc_7.461
YALI1_C20550g	Compare to YALI0C14762g, no similarity
YALI1_C20559g	Compare to YALI0C14784g, weakly similar to uniprot|P21957 Saccharomyces cerevisiae YHL020c OPI1 (regulator of phospholipid biosynthesis pathway), similar to Saccharomyces cerevisiae OPI1 (YHL020C); ancestral locus Anc_2.557
YALI1_C20597g	Compare to YALI0C14806g, similar to Saccharomyces cerevisiae YOR356W; ancestral locus Anc_7.33, similar to uniprot|P87111 Schizosaccharomyces pombe Probable electron transfer flavoprotein-ubiquinone oxidoreductase mitochondrial precursor (EC 1.5.5.1) (ETF- QO)
YALI1_C20646g	Compare to YALI0C14828g, similar to Saccharomyces cerevisiae CDC24 (YAL041W); ancestral locus Anc_7.32, weakly similar to uniprot|P11433 Saccharomyces cerevisiae YAL041w CDC24 GTP/GDP exchange factor for CDC42P
YALI1_C20664t	Compare to YALI0C03487g, Full length Line element,uniprot|Q8NIP4 Yarrowia lipolytica gag-like protein
YALI1_C20685t	Compare to YALI0C03498g:2, Full length Line element
YALI1_C20793g	Compare to YALI0C14872g, weakly similar to DEHA0B02497g Debaryomyces hansenii IPF 9327.1 and ca|CA4834|IPF1217 Candida albicans or ca|IPF1216 Candida albicans
YALI1_C20853g	Converted to coding from non-coding YALI0C14894g, similar to CA4833|IPF1216 Candida albicans IPF1216 unknown function
YALI1_C20901g	Compare to YALI0C14938g, similar to uniprot|Q12303 Saccharomyces cerevisiae YLR121c YPS3 GPI-anchored aspartyl protease 3 (yapsin 3) P8.5.f5.1
YALI1_C20953g	Compare to YALI0C14960g, similar to Saccharomyces cerevisiae MUS81 (YDR386W); ancestral locus Anc_5.468, weakly similar to uniprot|Q04149 Saccharomyces cerevisiae YDR386w MUS81 involved in the repair of UV and methylation induced DNA damage
YALI1_C21083g	Compare to YALI0C15004g, highly similar to uniprot|Q6CE66 Yarrowia lipolytica YALI0B18194g
YALI1_C21171g	Compare to YALI0C15026g, some similarities with uniprot|Q54300 Streptomyces hygroscopicus Methyltransferase
YALI1_C21234g	Compare to YALI0C15048g, similar to Saccharomyces cerevisiae DSS1 (YMR287C); ancestral locus Anc_8.853, weakly similar to uniprot|P39112 Saccharomyces cerevisiae YMR287C DSS1 3'-5' exoribonuclease, component of the mitochondrial degradosome along with the ATP- dependent RNA helicase Suv3p
YALI1_C21241g	Compare to YALI0C15070g, similar to Saccharomyces cerevisiae NST1 (YNL091W); ancestral locus Anc_2.199, weakly similar to uniprot|P53935 Saccharomyces cerevisiae YNL091w
YALI1_C21298g	Compare to YALI0C15092g, some similarities with uniprot|P41913 Saccharomyces cerevisiae YOR355W GDS1 protein
YALI1_C21353g	Compare to YALI0C15114g, similar to Saccharomyces cerevisiae CLN3 (YAL040C); ancestral locus Anc_7.36, similar to uniprot|P24866 Candida albicans G1/S- specific cyclin CLN1
YALI1_C21401g	Compare to YALI0C15136g, no similarity
YALI1_C21448g	Compare to YALI0C15202g, similar to Saccharomyces cerevisiae STB5 (YHR178W); ancestral locus Anc_5.59, weakly similar to uniprot|P43634 Saccharomyces cerevisiae YLR098c CHA4 transcription factor
YALI1_C21487g	Compare to YALI0C15224g, highly similar to uniprot|P36421 Saccharomyces cerevisiae YGR185C Tyrosyl-tRNA synthetase cytoplasmic (EC 6.1.1.1) (Tyrosyl--tRNA ligase) (TyrRS), similar to Saccharomyces cerevisiae TYS1 (YGR185C); ancestral locus Anc_5.192
YALI1_C21497g	Compare to YALI0C15230g, gnl|GLV|YALI0C15230g [Yarrowia lipolytica] weakly similar to uniprot|Q8D5F7 Vibrio vulnificus Predicted thioesterase
YALI1_C21513g	Compare to YALI0C15237g, gnl|GLV|YALI0C15237g [Yarrowia lipolytica] similar to uniprot|P15114 Candida glabrata Metallothionein-II
YALI1_C21544g	Compare to YALI0C15246g, some similarities with DEHA0F19426g Debaryomyces hansenii IPF 7547.1
YALI1_C21578g	Compare to YALI0C15268g, similar to uniprot|Q6C0U4 Yarrowia lipolytica YALI0F21703g
YALI1_C21603g	Compare to YALI0C15290g, similar to uniprot|P38219 Saccharomyces cerevisiae YBR025C Hypothetical 44.2 kDa GTP-binding protein
YALI1_C21626g	Compare to YALI0C15304g, similar to uniprot|Q9D6L8 Mus musculus 2310076N22Rik protein Peptidyl-prolyl cis-trans isomerase
YALI1_C21634g	Compare to YALI0C15323g, gnl|GLV|YALI0C15323g [Yarrowia lipolytica] similar to uniprot|P36533 Saccharomyces cerevisiae YML009C Mitochondrial 60S ribosomal protein L39 (YmL39)
YALI1_C21639g	Compare to YALI0C15334g, weakly similar to uniprot|P33891 Saccharomyces cerevisiae YGL145w TIP20 required for ER to Golgi transport, similar to Saccharomyces cerevisiae TIP20 (YGL145W); ancestral locus Anc_2.329
YALI1_C21664g	Compare to YALI0C15345g, gnl|GLV|YALI0C15345g [Yarrowia lipolytica] weakly similar to uniprot|P17261 Saccharomyces cerevisiae YCR075c Transmembrane protein ERS1 (ERD suppressor), similar to Saccharomyces cerevisiae ERS1 (YCR075C); ancestral locus Anc_6.346
YALI1_C21682g	Compare to YALI0C15356g, uniprot|Q9UV06 Yarrowia lipolytica Peroxisome assembly protein Pex1p
YALI1_C21722g	Compare to YALI0C15378g, some similarities with uniprot|Q9P5Y7 Neurospora crassa Related to mitotic apparatus protein p62
YALI1_C21755g	Truncated form of YALI0C15400g, similar to Saccharomyces cerevisiae YPL184C; ancestral locus Anc_6.183, similar to ca|IPF9132 Candida albicans
YALI1_C21789g	Compare to YALI0C15422g, similar to wi|NCU00102.1 Neurospora crassa NCU00102. 1 predicted protein
YALI1_C21858t	Full length Line element
YALI1_C21880t	Full length Line element
YALI1_C21891g	Compare to YALI0C15444g, similar to uniprot|Q12706 Schizosaccharomyces pombe Probable ribosomal serine/threonine protein kinase PSK1 (EC 2.7.1.-), similar to Saccharomyces cerevisiae IPL1 (YPL209C); ancestral locus Anc_6.222
YALI1_C21924g	Compare to YALI0C15466g, no similarity
YALI1_C21946g	Compare to YALI0C15488g, similar to uniprot|P36035 Saccharomyces cerevisiae YKL217w JEN1 carboxylic acid transporter protein
YALI1_C22019g	Compare to YALI0C15532g, some similarities with uniprot|P09230 Yarrowia lipolytica Alkaline extracellular protease precursor (EC 3. 4.21.-) (AEP)
YALI1_C22186g	Compare to YALI0C15554g, similar to Saccharomyces cerevisiae THI6 (YPL214C); ancestral locus Anc_6.231, similar to uniprot|P41835 Saccharomyces cerevisiae YPL214c THI6 thiamin-phosphate pyrophosphorylase and hydroxyethylthiazole kinase
YALI1_C22322g	Compare to YALI0C15576g, similar to Saccharomyces cerevisiae YBL029W; ancestral locus Anc_3.314, no similarity
YALI1_C22541g	Compare to YALI0C15609g, no similarity
YALI1_C22592g	Compare to YALI0C15653g, similar to uniprot|O74942 Schizosaccharomyces pombe Putative cyclophilin-type peptidyl-prolyl cis-trans isomerase protein (EC 5.2.1.8)
YALI1_C22751g	Compare to YALI0C15807g, similar to uniprot|P33413 Saccharomyces cerevisiae YHL016c DUR3 urea transport protein
YALI1_C22816g	Compare to YALI0C15829g, similar to uniprot|P46988 Saccharomyces cerevisiae YJL179w PFD1 Prefoldin subunit 1, similar to Saccharomyces cerevisiae PFD1 (YJL179W); ancestral locus Anc_1.159
YALI1_C22835g	Compare to YALI0C15851g, similar to Saccharomyces cerevisiae ATG27 (YJL178C); ancestral locus Anc_1.160, some similarities with uniprot|Q8WZV1 Neurospora crassa B7N14.280 Conserved hypothetical protein
YALI1_C22857g	Compare to YALI0C15873g, similar to Saccharomyces cerevisiae NOP1 (YDL014W); ancestral locus Anc_3.185, highly similar to uniprot|P15646 Saccharomyces cerevisiae YDL014w NOP1 fibrillarin
YALI1_C22922g	Compare to YALI0C15895g, highly similar to uniprot|P46990 Saccharomyces cerevisiae YJL177w RPL20B 60s large subunit ribosomal protein L17.e P2.300.f2.1, similar to Saccharomyces cerevisiae RPL17B (YJL177W) and RPL17A (YKL180W); ancestral locus Anc_1.161
YALI1_C22944g	Compare to YALI0C15917g, no similarity
YALI1_C22986g	Truncated form of YALI0C15939g, no similarity
YALI1_C23040g	Compare to YALI0C16005g, some similarities with uniprot|Q8X0X8 Neurospora crassa
YALI1_C23050g	Compare to YALI0C16027g, similar to Saccharomyces cerevisiae SNF7 (YLR025W); ancestral locus Anc_2.422, similar to uniprot|P39929 Saccharomyces cerevisiae YLR025w SNF7 class E Vps protein
YALI1_C23075g	Compare to YALI0C16049g, similar to Saccharomyces cerevisiae CAM1 (YPL048W); ancestral locus Anc_8.498, some similarities with uniprot|P26642 Xenopus laevis Elongation factor 1-gamma type 1 (EF-1-gamma) (P47)
YALI1_C23089g	Converted to coding from non-coding YALI0C16093g, no similarity
YALI1_C23120g	Compare to YALI0C16126g, no similarity
YALI1_C23150g	Truncated form of YALI0C16148g, no similarity
YALI1_C23175g	Compare to YALI0C16181g, no similarity
YALI1_C23193g	Compare to YALI0C16203g, similar to uniprot|Q04225 Saccharomyces cerevisiae YMR131c RSA2 RRB1_YEAST Ribosome assembly protein RRB1
YALI1_C23217g	Compare to YALI0C16225g, similar to uniprot|O74395 Schizosaccharomyces pombe MFS efflux transporter of unknown specificity
YALI1_C23254g	Truncated form of YALI0C16247g, no similarity
YALI1_C23323g	Converted to coding from non-coding YALI0C16291g, no similarity frameshifts
YALI1_C23359g	Truncated form of YALI0C16346g, some similarities with uniprot|P25558 Saccharomyces cerevisiae YCL014W Bud site selection protein BUD3, similar to Saccharomyces cerevisiae BUD3 (YCL014W); ancestral locus Anc_1.406
YALI1_C23415g	Compare to YALI0C16368g, similar to Saccharomyces cerevisiae IST3 (YIR005W); ancestral locus Anc_7.159, similar to uniprot|P40565 Saccharomyces cerevisiae YIR005w IST3 similarity to RNA-binding proteins
YALI1_C23472g	Compare to YALI0C16390g, similar to Saccharomyces cerevisiae ECM5 (YMR176W); ancestral locus Anc_6.247, some similarities with uniprot|Q03214 Saccharomyces cerevisiae YMR176w ECM5 involved in cell wall biogenesis and architecture
YALI1_C23504g	Compare to YALI0C16412g, weakly similar to uniprot|P32912 Saccharomyces cerevisiae YGL212w VAM7 vacuolar morphogenesis protein, similar to Saccharomyces cerevisiae VAM7 (YGL212W); ancestral locus Anc_3.525
YALI1_C23511g	Compare to YALI0C16434g, similar to Saccharomyces cerevisiae GUK1 (YDR454C); ancestral locus Anc_5.572, similar to uniprot|P15454 Saccharomyces cerevisiae YDR454c GUK1 guanylate kinase
YALI1_C23526g	Compare to YALI0C16456g, similar to Saccharomyces cerevisiae YML030W; ancestral locus Anc_5.571, some similarities with uniprot|Q03713 Saccharomyces cerevisiae YML030w
YALI1_C23548g	Truncated form of YALI0C16478g, similar to Saccharomyces cerevisiae MRPL28 (YDR462W); ancestral locus Anc_5.584, similar to uniprot|P36527 Saccharomyces cerevisiae YDR462w MRPL28 ribosomal protein of the large subunit (YmL28) mitochondrial
YALI1_C23563g	Truncated form of YALI0C16500g, weakly similar to uniprot|O59671 Schizosaccharomyces pombe Pof4 protein, similar to Saccharomyces cerevisiae ELA1 (YNL230C); ancestral locus Anc_2.13
YALI1_C23601g	Compare to YALI0C16522g, similar to uniprot|P39932 Saccharomyces cerevisiae YDR536w STL1 member of the sugar permease family P33.1.f24. 1
YALI1_C23653g	Compare to YALI0C16544g, no similarity
YALI1_C23707g	Compare to YALI0C16566g, similar to Saccharomyces cerevisiae RPO21 (YDL140C); ancestral locus Anc_7.314, highly similar to uniprot|P04050 Saccharomyces cerevisiae YDL140c RPO21 DNA-directed RNA polymerase II 215 KD subunit
YALI1_C23723g	Compare to YALI0C16599g, some similarities with uniprot|O23588 Arabidopsis thaliana LTR Retrotransposon (Retrotransposon like protein) fragment
YALI1_C23738g	Compare to YALI0C16621g, similar to Saccharomyces cerevisiae SOD2 (YHR008C); ancestral locus Anc_5.590, similar to uniprot|P00447 Saccharomyces cerevisiae YHR008c SOD2 superoxide dismutase (Mn) precursor mitochondrial (EC 1.15.1.1)
YALI1_C23755g	Compare to YALI0C16643g, similar to Saccharomyces cerevisiae RAD26 (YJR035W); ancestral locus Anc_1.459, similar to uniprot|P40352 Saccharomyces cerevisiae YJR035w RAD26 DNA repair and recombination protein P17.1. f16.1
YALI1_C23818g	Compare to YALI0C16665g, similar to uniprot|P14680 Saccharomyces cerevisiae YJL141c YAK1 ser/thr protein kinase P108.1.f3.5
YALI1_C23826g	Compare to YALI0C16687g, similar to uniprot|P17624 Emericella nidulans Nuclear movement protein NUDC
YALI1_C23873g	Compare to YALI0C16709g, similar to Saccharomyces cerevisiae RAV1 (YJR033C); ancestral locus Anc_1.457, similar to uniprot|P47104 Saccharomyces cerevisiae YJR033c
YALI1_C23881g	Truncated form of YALI0C16731g, similar to Saccharomyces cerevisiae PET191 (YJR034W); ancestral locus Anc_1.458, similar to uniprot|Q02772 Saccharomyces cerevisiae YJR034w PET191 involved in assembly of cytochrome oxidase
YALI1_C23902g	Compare to YALI0C16753g, highly similar to ca|CA5757|IPF1067 Candida albicans Putative glutamate decarboxylase
YALI1_C23926g	Compare to YALI0C16775g, similar to uniprot|P53691 Saccharomyces cerevisiae YLR216c CPR6 member of the cyclophilin family P8.4.f6.1, similar to Saccharomyces cerevisiae CPR7 (YJR032W); ancestral locus Anc_1.456
YALI1_C23948g	Truncated form of YALI0C16797g, similar to uniprot|Q96VP9 Glomus intraradices Probable acyl-CoA dehydrogenase
YALI1_C23989g	Compare to YALI0C16819g, similar to uniprot|Q01590 Saccharomyces cerevisiae YLR026c SED5 syntaxin (T-SNARE), similar to Saccharomyces cerevisiae SED5 (YLR026C); ancestral locus Anc_2.421
YALI1_C24016g	Compare to YALI0C16841g, similar to Saccharomyces cerevisiae SPO73 (YER046W); ancestral locus Anc_7.212, some similarities with AN4995 2 Aspergillus nidulans predicted protein
YALI1_C24081g	Compare to YALI0C16863g, similar to Saccharomyces cerevisiae ACA1 (YER045C) and CST6 (YIL036W); ancestral locus Anc_7.211, weakly similar to uniprot|P35732 Saccharomyces cerevisiae YKL054c
YALI1_C24124g	Truncated form of YALI0C16885g, uniprot|P41555 Yarrowia lipolytica Isocitrate lyase
YALI1_C24165g	Compare to YALI0C16907g, similar to uniprot|P15365 Saccharomyces cerevisiae YJR152w DAL5 allantoate permease P10.2.f3.1
YALI1_C24200g	Compare to YALI0C16929g, similar to uniprot|Q96X51 Pholiota nameko and uniprot|O94342 Schizosaccharomyces pombe Metabolite transport protein
YALI1_C24262g	Compare to YALI0C16951g, similar to uniprot|Q96X51 Pholiota nameko Probable metabolite transporter
YALI1_C24303g	Compare to YALI0C16973g, similar to DEHA0G11330g Debaryomyces hansenii IPF 4134.1 and YDR346c uniprot|Q05515 Saccharomyces cerevisiae YDR346c
YALI1_C24367g	Compare to YALI0C16995g, highly similar to uniprot|P10963 Saccharomyces cerevisiae YKR097w PCK1 phosphoenolpyruvate carboxykinase, similar to Saccharomyces cerevisiae PCK1 (YKR097W); ancestral locus Anc_5.708
YALI1_C24400g	Compare to YALI0C17017g, similar to Saccharomyces cerevisiae KAR4 (YCL055W); ancestral locus Anc_1.12, similar to uniprot|P25583 Saccharomyces cerevisiae YCL055w KAR4 regulatory protein required for pheromone induction of karyogamy genes
YALI1_C24419g	Compare to YALI0C17039g, no similarity
YALI1_C24434g	Compare to YALI0C17061g, some similarities with uniprot|P31669 Xenopus laevis Poly [ADP-ribose] polymerase (EC 2.4.2.30)
YALI1_C24460g	Compare to YALI0C17083g, similar to Saccharomyces cerevisiae ESF1 (YDR365C); ancestral locus Anc_5.430, similar to uniprot|Q06344 Saccharomyces cerevisiae YDR365c
YALI1_C24488g	Compare to YALI0C17105g, similar to uniprot|O94343 Schizosaccharomyces pombe Putative MSF transporter
YALI1_C24526g	Compare to YALI0C17193g, weakly similar to AJ621548 MudrB Yarrowia lipolytica transposon Mutyl
YALI1_C24533g	Compare to YALI0C17215g, no similarity
YALI1_C24567g	Compare to YALI0C17237g, highly similar to uniprot|P19145 Saccharomyces cerevisiae YKR039W General amino-acid permease GAP1
YALI1_C24611g	Compare to YALI0C17281g, similar to uniprot|P39709 Saccharomyces cerevisiae YAL067C transporter SEO1 sulfoxyde ethionine resistance
YALI1_C24647g	Compare to YALI0C17303g, similar to uniprot|P39709 Saccharomyces cerevisiae YAL067C transporter SEO1 sulfoxyde ethionine resistance
YALI1_C24660g	Compare to YALI0C17325g, highly similar to uniprot|P40302 Saccharomyces cerevisiae YMR314w PRE5 20S proteasome subunit(alpha6)
YALI1_C24707g	Compare to YALI0C17347g, highly similar to uniprot|P12398 Saccharomyces cerevisiae YJR045c SSC1 Heat shock protein 70-related protein SSC1 mitochondrial precursor (Endonuclease SCEI 75 kDa subunit)
YALI1_C24730g	Compare to YALI0C17369g, some similarities with uniprot|Q8ZGI1 Yersinia pestis Putative iron/ascorbate oxidoreductase family protein
YALI1_C24755g	Compare to YALI0C17391g, some similarities with uniprot|Q12287 Saccharomyces cerevisiae YLL009c COX17 interacts genetically with SCO1 and SCO2 in cytochrome oxidase assembly
YALI1_C24767g	Converted to coding from non-coding YALI0C17413g, some similarities with uniprot|Q6C822 Yarrowia lipolytica YALI0D23419g no start
YALI1_C24806g	Compare to YALI0C17501g, weakly similar to uniprot|Q9C2D8 Neurospora crassa Conserved hypothetical protein, similar to Saccharomyces cerevisiae CTF3 (YLR381W); ancestral locus Anc_4.235
YALI1_C24850g	Compare to YALI0C17545g, weakly similar to uniprot|Q06705 Saccharomyces cerevisiae YLR380w CSR1 weak similarity to SEC14 protein, similar to Saccharomyces cerevisiae CSR1 (YLR380W); ancestral locus Anc_4.234
YALI1_C24891g	Compare to YALI0C17567g, no similarity
YALI1_C24927g	Compare to YALI0C17589g, weakly similar to uniprot|Q6CGY5 Yarrowia lipolytica YALI0A14905g
YALI1_C24942g	Compare to YALI0C17633g, no similarity
YALI1_C24951g	Compare to YALI0C17655g, similar to uniprot|Q6C6E5 Yarrowia lipolytica YALI0E10153g
YALI1_C25029g	Compare to YALI0C17831g, similar to uniprot|Q08220 Saccharomyces cerevisiae YOL049w GSH2 Glutathione synthetase, similar to Saccharomyces cerevisiae GSH2 (YOL049W); ancestral locus Anc_7.82
YALI1_C25032g	Compare to YALI0C17853g, weakly similar to uniprot|Q04347 Saccharomyces cerevisiae YMR014w, similar to Saccharomyces cerevisiae BUD22 (YMR014W); ancestral locus Anc_2.561
YALI1_C25053g	Compare to YALI0C17875g, similar to Saccharomyces cerevisiae CCW14 (YLR390W-A); ancestral locus Anc_4.251, weakly similar to uniprot|O13547 Saccharomyces cerevisiae YLR390wa: covalently-linked cell wall protein 14 precursor (Inner cell wallprotein)
YALI1_C25069g	Compare to YALI0C17897g, some similarities with uniprot|P38263 Saccharomyces cerevisiae YBR105c VID24 required for vacuolar import and degradation of FBP1P
YALI1_C25080g	Compare to YALI0C17919g, no similarity
YALI1_C25093g	Compare to YALI0C17941g, similar to uniprot|P32621 Saccharomyces cerevisiae YEL042w GDA1 guanosine diphosphatase P2.423.f2.1, similar to Saccharomyces cerevisiae GDA1 (YEL042W); ancestral locus Anc_1.485
YALI1_C25128g	Compare to YALI0C17963g, similar to uniprot|Q8CQR9 Staphylococcus epidermidis Conserved hypothetical protein and uniprot|P53729 Saccharomyces cerevisiae YNR029c
YALI1_C25171g	Compare to YALI0C18029g, weakly similar to uniprot|Q90WH3 Brachydanio rerio Putative b-carotene-9 10-dioxygenase
YALI1_C25190g	Compare to YALI0C18051g, similar to uniprot|P39109 Saccharomyces cerevisiae YDR135c YCFI Metal resistance protein YDR135c probable ATP- dependent glutathione S-conjugate transporter vacuolar
YALI1_C25244g	Compare to YALI0C18073g, similar to Saccharomyces cerevisiae ERP5 (YHR110W); ancestral locus Anc_5.420, weakly similar to uniprot|Q05359 Saccharomyces cerevisiae YAR002ca p24 protein involved in membrane trafficking
YALI1_C25257g	Compare to YALI0C18095g, similar to uniprot|P38820 Saccharomyces cerevisiae YHR111w, similar to Saccharomyces cerevisiae UBA4 (YHR111W); ancestral locus Anc_5.421
YALI1_C25288g	Compare to YALI0C18117g, similar to Saccharomyces cerevisiae TFC6 (YDR362C); ancestral locus Anc_5.422, weakly similar to uniprot|Q06339 Saccharomyces cerevisiae YDR362c TFC6 TFIIIC (transcription initiation factor) subunit 91 kD
YALI1_C25301g	Truncated form of YALI0C18139g, similar to uniprot|P38064 Saccharomyces cerevisiae YBL038w MRPL16 ribosomal protein of the large subunit (YmL47) mitochondrial, similar to Saccharomyces cerevisiae MRPL16 (YBL038W); ancestral locus Anc_3.327
YALI1_C25307g	Compare to YALI0C18161g, similar to Saccharomyces cerevisiae GCN3 (YKR026C); ancestral locus Anc_1.263, highly similar to uniprot|P14741 Saccharomyces cerevisiae YKR026c GCN3 translation initiation factor eIF2B 34 KD alpha subunit P2.289.f2.1
YALI1_C25336g	Compare to YALI0C18183g, highly similar to DEHA0G23144g Debaryomyces hansenii IPF 4906.1
YALI1_C25352g	Compare to YALI0C18205g, similar to Saccharomyces cerevisiae COQ5 (YML110C); ancestral locus Anc_8.833, highly similar to uniprot|P49017 Saccharomyces cerevisiae YML110c DBI56 Ubiquinone biosynthesis methyltransferase COQ5 (EC 2.1.1.-)
YALI1_C25367g	Compare to YALI0C18227g, similar to uniprot|P21560 Saccharomyces cerevisiae YPL215w CBP3 required for assembly of cytochrome bc1 complex, similar to Saccharomyces cerevisiae CBP3 (YPL215W); ancestral locus Anc_6.232
YALI1_C25377g	Compare to YALI0C18249g, no similarity
YALI1_C25391g	Compare to YALI0C18263g, no similarity
YALI1_C25452g	Compare to YALI0C18293g, weakly similar to uniprot|Q9N4S7 Caenorhabditis elegans Y51B11A.1 protein
YALI1_C25512g	Compare to YALI0C18315g, similar to ca|CA0673|CaAMO2 Candida albicans amine oxidase
YALI1_C25560g	Compare to YALI0C18359g, some similarities with uniprot|Q03455 Saccharomyces cerevisiae YDR205w MSC2
YALI1_C25576g	Compare to YALI0C18381g, similar to Saccharomyces cerevisiae CIA1 (YDR267C); ancestral locus Anc_5.631, some similarities with uniprot|Q9UT57 Schizosaccharomyces pombe WD domian G-beta repeat protein
YALI1_C25581g	Compare to YALI0C18403g, similar to Saccharomyces cerevisiae CYC2 (YOR037W); ancestral locus Anc_5.632, some similarities with uniprot|P38909 Saccharomyces cerevisiae YOR037w CYC2 cytochrome-c mitochondrial import factor
YALI1_C25598g	Compare to YALI0C18425g, similar to Saccharomyces cerevisiae MSW1 (YDR268W); ancestral locus Anc_5.633, similar to uniprot|P04803 Saccharomyces cerevisiae YDR268w MSW1 tryptophanyl-tRNA synthetase mitochondrial
YALI1_C25621g	Compare to YALI0C18447g, similar to uniprot|P32458 Saccharomyces cerevisiae YJR076c CDC11 septin P7.7.f7.1
YALI1_C25629g	Compare to YALI0C18469g, similar to uniprot|P53197 Saccharomyces cerevisiae YGL003c CDH1 substrate-specific activator of APC-dependent proteolysis P29.1.f2.5
YALI1_C25703g	Compare to YALI0C18491g, similar to uniprot|Q06593 Saccharomyces cerevisiae YPR194C
YALI1_C25758g	Compare to YALI0C18513g, similar to uniprot|P38523 Saccharomyces cerevisiae YOR232w MGE1 heat shock protein - chaperone, similar to Saccharomyces cerevisiae MGE1 (YOR232W); ancestral locus Anc_8.653
YALI1_C25782g	Compare to YALI0C18535g, similar to uniprot|P08425 Saccharomyces cerevisiae YPR047w MSF1 phenylalanine--tRNA ligase alpha chain mitochondrial, similar to Saccharomyces cerevisiae MSF1 (YPR047W); ancestral locus Anc_3.328
YALI1_C25789g	Compare to YALI0C18557g, similar to uniprot|P39677 Saccharomyces cerevisiae YJL102w MEF2 translation elongation factor mitochondrial P7.8.f4.1
YALI1_C25829g	Compare to YALI0C18623g, weakly similar to uniprot|P38065 Saccharomyces cerevisiae YBL037w APL3 AP-2 complex subunit alpha-adaptin 113 KD P3.123.f2.1, similar to Saccharomyces cerevisiae APL3 (YBL037W); ancestral locus Anc_3.325
YALI1_C25877g	Compare to YALI0C18645g, similar to uniprot|Q04052 Saccharomyces cerevisiae YDR421w positive transcription regulator of ARO9 and ARO10
YALI1_C25937g	Compare to YALI0C18667g, weakly similar to uniprot|Q9UTN0 Schizosaccharomyces pombe Putative transcriptional activator
YALI1_C25979g	Compare to YALI0C18689g, uniprot|P36966 Yarrowia lipolytica Peroxisome biosynthesis protein PAY4 (Peroxin-6)
YALI1_C25990g	Compare to YALI0C18711g, weakly similar to uniprot|Q12155 Saccharomyces cerevisiae YLR050C, similar to Saccharomyces cerevisiae YLR050C; ancestral locus Anc_8.60
YALI1_C25998g	Compare to YALI0C18733g, some similarities with uniprot|P42834 Saccharomyces cerevisiae YNL328c MDJ2 and some similarities with uniprot|Q07914 Saccharomyces cerevisiae YLR008C PAM18 Constituent of the mitochondrial import motor associated with the presequence translocase
YALI1_C26017g	Compare to YALI0C18755g, similar to uniprot|P18900 Saccharomyces cerevisiae YBR003w COQ1 hexaprenyl pyrophosphate synthetase precursor, similar to Saccharomyces cerevisiae COQ1 (YBR003W); ancestral locus Anc_3.202
YALI1_C26027g	Compare to YALI0C18777g, no similarity
YALI1_C26036g	Compare to YALI0C18799g, similar to uniprot|P35196 Saccharomyces cerevisiae YBR002C Dehydrodolichyl diphosphate synthetase (EC 2.5.1.-), similar to Saccharomyces cerevisiae RER2 (YBR002C); ancestral locus Anc_3.203
YALI1_C26051g	Compare to YALI0C18821g, similar to uniprot|P34237 Saccharomyces cerevisiae YKL179c, similar to Saccharomyces cerevisiae COY1 (YKL179C); ancestral locus Anc_1.162
YALI1_C26106g	Compare to YALI0C18975g, similar to uniprot|O74372 Schizosaccharomyces pombe Hypothetical protein
YALI1_C26138g	Compare to YALI0C18997g, weakly similar to uniprot|P38687 Saccharomyces cerevisiae YPL243w SRP68 signal recognition particle protein, similar to Saccharomyces cerevisiae SRP68 (YPL243W); ancestral locus Anc_6.271
YALI1_C26146g	Compare to YALI0C19019g, no similarity
YALI1_C26167g	Compare to YALI0C19041g, highly similar to uniprot|P25374 Saccharomyces cerevisiae YCL017c NFS1 regulates Iron-Sulfur cluster proteins cellular Iron uptake and Iron distribution, similar to Saccharomyces cerevisiae NFS1 (YCL017C); ancestral locus Anc_1.403
YALI1_C26222g	Compare to YALI0C19063g, no similarity
YALI1_C26276g	Compare to YALI0C19085g, similar to uniprot|P37262 Saccharomyces cerevisiae YCR073wa SOL2 multicopy suppressor of LOS1-1 P4.51.f4.1
YALI1_C26332g	Compare to YALI0C19096g, gnl|GLV|YALI0C19096g [Yarrowia lipolytica] no similarity
YALI1_C26377g	Compare to YALI0C19107g, some similarities with uniprot|Q6CD23 Yarrowia lipolytica YALI0C04389g
YALI1_C26408g	Compare to YALI0C19129g, similar to Saccharomyces cerevisiae SMC4 (YLR086W); ancestral locus Anc_8.259, similar to uniprot|Q12267 Saccharomyces cerevisiae YLR086w SMC4 Stable Maintenance of Chromosomes P37.1.f4.2
YALI1_C26501g	Compare to YALI0C19151g, weakly similar to uniprot|P39113 Saccharomyces cerevisiae YMR280c CAT8 transcription factor involved in gluconeogenesis P2.187.f2.1
YALI1_C26544g	Compare to YALI0C19195g, similar to Saccharomyces cerevisiae PET8 (YNL003C); ancestral locus Anc_1.404, similar to uniprot|P38921 Saccharomyces cerevisiae YNL003c PET8 member of the mitochondrial carrier (MCF)
YALI1_C26580g	Compare to YALI0C19217g, similar to Saccharomyces cerevisiae DCC1 (YCL016C); ancestral locus Anc_1.405, similar to uniprot|P25559 Saccharomyces cerevisiae YCL016c/DCC1 part of an alternative RFC complex
YALI1_C26597g	Compare to YALI0C19239g, weakly similar to uniprot|Q6C860 Yarrowia lipolytica YALI0D22462g
YALI1_C26616g	Compare to YALI0C19261g, no similarity
YALI1_C26628g	Compare to YALI0C19283g, similar to Saccharomyces cerevisiae YPR153W; ancestral locus Anc_3.500, similar to uniprot|Q06537 Saccharomyces cerevisiae YPR153W Hypothetical protein
YALI1_C26682t	Compare to YALI0C19305g, Full length Line element,uniprot|Q8NIP3 Yarrowia lipolytica Reverse transcriptase
YALI1_C26703t	Compare to YALI0C19316g, Full length Line element,uniprot|Q8NIP4 Yarrowia lipolytica gag-like protein
YALI1_C26726g	Compare to YALI0C19338g, no similarity possibly noncoding
YALI1_C26745g	Compare to YALI0C19360g, similar to uniprot|Q6CD59 Yarrowia lipolytica YALI0C03542g
YALI1_C26764g	Compare to YALI0C19382g, similar to Saccharomyces cerevisiae PRE9 (YGR135W); ancestral locus Anc_3.499, highly similar to uniprot|P23638 Saccharomyces cerevisiae YGR135w PRE9 20S proteasome subunit Y13 (alpha3) P7.1.f7.1
YALI1_C26777g	Compare to YALI0C19404g, some similarities with uniprot|Q06525 Saccharomyces cerevisiae YPR152c, similar to Saccharomyces cerevisiae YPR152C; ancestral locus Anc_3.498
YALI1_C26794g	Compare to YALI0C19426g, weakly similar to uniprot|P19735 Saccharomyces cerevisiae YBR055c PRP6 snRNP(U4/U6)-associated splicing factor, similar to Saccharomyces cerevisiae PRP6 (YBR055C); ancestral locus Anc_3.265
YALI1_C26837g	Compare to YALI0C19448g, similar to uniprot|P22135 Saccharomyces cerevisiae YJL180c ATP12 F1F0-ATPase complex assembly protein
YALI1_C26873g	Compare to YALI0C19558g, similar to Saccharomyces cerevisiae HEK2 (YBL032W); ancestral locus Anc_3.318, similar to uniprot|P38151 Saccharomyces cerevisiae YBR233w PBP2 PAB1 binding protein no start
YALI1_C26890g	Compare to YALI0C19580g, some similarities with uniprot|Q8NKS0 Pyrobaculum calidifontis Esterase (EC 3.1.1.1)
YALI1_C26915g	Compare to YALI0C19602g, weakly similar to uniprot|P08640 Saccharomyces cerevisiae YIR019c STA1 extracellular alpha-1 4-glucan glucosidase P2.341.f2.1
YALI1_C26939g	Compare to YALI0C19624g, similar to uniprot|P38071 Saccharomyces cerevisiae YBR026c (MRF1) mitochondrial respiratory function protein
YALI1_C26959g	Compare to YALI0C19646g, similar to uniprot|Q12335 Saccharomyces cerevisiae YDR032c PST2
YALI1_C26975g	Compare to YALI0C19668g, similar to uniprot|Q12335 Saccharomyces cerevisiae YDR032c PST2
YALI1_C27012g	Compare to YALI0C19682g, similar to CA0795|IPF15641 Candida albicans IPF15641 unknown function
YALI1_C27019g	Compare to YALI0C19690g, some similarities with uniprot|O74942 Schizosaccharomyces pombe Putative cyclophilin-type peptidyl-prolyl cis-trans isomerase protein
YALI1_C27061g	Compare to YALI0C19712g, similar to uniprot|P40009 Saccharomyces cerevisiae YER005w YND1 Yeast Nucleoside Diphosphatase P2.423.f2.1
YALI1_C27073g	Compare to YALI0C19734g, no similarity possibly noncoding
YALI1_C27101g	Compare to YALI0C19756g, no similarity
YALI1_C27109g	Compare to YALI0C19778g, similar to Saccharomyces cerevisiae YDL057W; ancestral locus Anc_4.233, similar to CA2716|IPF7353 Candida albicans IPF7353 unknown function
YALI1_C27141g	Compare to YALI0C19800g, weakly similar to uniprot|Q91255 Petromyzon marinus NF- 180
YALI1_C27182g	Compare to YALI0C19822g, no similarity
YALI1_C27207g	Compare to YALI0C19844g, no similarity
YALI1_C27229g	Compare to YALI0C19866g, highly similar to uniprot|P30887 Yarrowia lipolytica Acid phosphatase precursor (EC 3.1.3.2) PHO2
YALI1_C27286t	Compare to YALI0C19888g, Full length Line element,uniprot|Q8NIP3 Yarrowia lipolytica Reverse transcriptase
YALI1_C27308t	Full length Line element
YALI1_C27330g	Compare to YALI0C19338g:2, no similarity possibly noncoding
YALI1_C27350g	Compare to YALI0C19360g:2, similar to uniprot|Q6CD59 Yarrowia lipolytica YALI0C03542g
YALI1_C27369g	Compare to YALI0C19382g:2, highly similar to uniprot|P23638 Saccharomyces cerevisiae YGR135w PRE9 20S proteasome subunit Y13 (alpha3) P7.1.f7.1
YALI1_C27382g	Compare to YALI0C19404g:2, some similarities with uniprot|Q06525 Saccharomyces cerevisiae YPR152c
YALI1_C27398g	Compare to YALI0C19426g:2, weakly similar to uniprot|P19735 Saccharomyces cerevisiae YBR055c PRP6 snRNP(U4/U6)-associated splicing factor
YALI1_C27442g	Compare to YALI0C19448g:2, similar to uniprot|P22135 Saccharomyces cerevisiae YJL180c ATP12 F1F0-ATPase complex assembly protein
YALI1_C27476g	Compare to YALI0C19558g:2, similar to uniprot|P38151 Saccharomyces cerevisiae YBR233w PBP2 PAB1 binding protein no start
YALI1_C27494g	Compare to YALI0C19580g:2, some similarities with uniprot|Q8NKS0 Pyrobaculum calidifontis Esterase (EC 3.1.1.1)
YALI1_C27519g	Compare to YALI0C19602g:2, weakly similar to uniprot|P08640 Saccharomyces cerevisiae YIR019c STA1 extracellular alpha-1 4-glucan glucosidase P2.341.f2.1
YALI1_C27543g	Compare to YALI0C19624g:2, similar to uniprot|P38071 Saccharomyces cerevisiae YBR026c (MRF1) mitochondrial respiratory function protein
YALI1_C27563g	Compare to YALI0C19646g:2, similar to uniprot|Q12335 Saccharomyces cerevisiae YDR032c PST2
YALI1_C27579g	Compare to YALI0C19668g:2, similar to uniprot|Q12335 Saccharomyces cerevisiae YDR032c PST2
YALI1_C27616g	Compare to YALI0C19682g:2, similar to CA0795|IPF15641 Candida albicans IPF15641 unknown function
YALI1_C27624g	Compare to YALI0C19690g:2, some similarities with uniprot|O74942 Schizosaccharomyces pombe Putative cyclophilin-type peptidyl-prolyl cis-trans isomerase protein
YALI1_C27665g	Compare to YALI0C19712g:2, similar to uniprot|P40009 Saccharomyces cerevisiae YER005w YND1 Yeast Nucleoside Diphosphatase P2.423.f2.1
YALI1_C27678g	Compare to YALI0C19734g:2, no similarity possibly noncoding
YALI1_C27706g	Compare to YALI0C19756g:2, no similarity
YALI1_C27713g	Compare to YALI0C19778g:2, similar to CA2716|IPF7353 Candida albicans IPF7353 unknown function
YALI1_C27746g	Compare to YALI0C19800g:2, weakly similar to uniprot|Q91255 Petromyzon marinus NF- 180
YALI1_C27786g	Compare to YALI0C19822g:2, no similarity
YALI1_C27812g	Compare to YALI0C19844g:2, no similarity
YALI1_C27834g	Compare to YALI0C19866g:2, highly similar to uniprot|P30887 Yarrowia lipolytica Acid phosphatase precursor (EC 3.1.3.2) PHO2
YALI1_C27891t	Compare to YALI0C19888g:2, Full length Line element
YALI1_C27912t	Compare to YALI0C19899g, Full length Line element,uniprot|Q8NIP4 Yarrowia lipolytica gag-like protein
YALI1_C27922g	Compare to YALI0C19943g, weakly similar to uniprot|Q08219 Saccharomyces cerevisiae YOL048C
YALI1_C27933g	Compare to YALI0C19965g, some similarities with uniprot|Q02207 Saccharomyces cerevisiae YKR009c FOX2 hydratase-dehydrogenase-epimerase peroxisomal
YALI1_C27958g	Compare to YALI0C19987g, similar to uniprot|P38747 Saccharomyces cerevisiae YHL013c, similar to Saccharomyces cerevisiae OTU2 (YHL013C); ancestral locus Anc_2.548
YALI1_C27996g	Compare to YALI0C20053g, similar to uniprot|P37020 Saccharomyces cerevisiae YJR040w GEF1voltage-gated chloride channel protein
YALI1_C28063g	Truncated form of YALI0C20075g, similar to uniprot|P40422 Saccharomyces cerevisiae YHR143W-A DNA-directed RNA polymerases I II and III 7.7 kDa polypeptide (EC 2.7.7.6) (ABC10-alpha), similar to Saccharomyces cerevisiae RPC10 (YHR143W-A); ancestral locus Anc_2.87
YALI1_C28093g	Compare to YALI0C20097g, no similarity
YALI1_C28147g	Compare to YALI0C20119g, similar to Saccharomyces cerevisiae ATG7 (YHR171W); ancestral locus Anc_5.66, similar to uniprot|P38862 Saccharomyces cerevisiae YHR171w APG7 component of the autophagic system
YALI1_C28166g	Compare to YALI0C20141g, similar to uniprot|Q05776 Saccharomyces cerevisiae YLR193c Similar to MSF1 protein, similar to Saccharomyces cerevisiae UPS1 (YLR193C); ancestral locus Anc_7.359
YALI1_C28228g	Compare to YALI0C20207g, some similarities with DEHA0G11033g Debaryomyces hansenii IPF 4165.1 and uniprot|Q8X0M6 Neurospora crassa
YALI1_C28245g	Compare to YALI0C20229g, no similarity
YALI1_C28263g	Compare to YALI0C20251g, similar to uniprot|Q12068 Saccharomyces cerevisiae YOL151w GRE2
YALI1_C28310g	Compare to YALI0C20265g, uniprot|Q6CBB8 Yarrowia lipolytica YlABC2
YALI1_C28370g	Compare to YALI0C20273g, similar to uniprot|Q9Y774 Candida tropicalis Secreted aspartic protease 2
YALI1_C28396g	Compare to YALI0C20295g, similar to Saccharomyces cerevisiae CTR1 (YPR124W); ancestral locus Anc_3.459, some similarities with uniprot|P49573 Saccharomyces cerevisiae YPR124W Copper transport protein CTR1
YALI1_C28412g	Compare to YALI0C20317g, similar to Saccharomyces cerevisiae YLR243W; ancestral locus Anc_8.397, highly similar to DEHA0G14091g Debaryomyces hansenii IPF 3941.1 and CA3563|IPF7819 Candida albicans
YALI1_C28434g	Compare to YALI0C20339g, similar to Saccharomyces cerevisiae SKI8 (YGL213C); ancestral locus Anc_3.526, similar to uniprot|Q09150 Schizosaccharomyces pombe Meiotic recombination protein rec14
YALI1_C28456g	Compare to YALI0C20361g, similar to DEHA0B02134g Debaryomyces hansenii IPF 9288.1
YALI1_C28465g	Compare to YALI0C20383g, no similarity
YALI1_C28479g	Compare to YALI0C20405g, similar to uniprot|P10768 Homo sapiens Esterase D (EC 3.1.1.1), similar to Saccharomyces cerevisiae YJL068C; ancestral locus Anc_1.308
YALI1_C28497g	Compare to YALI0C20427g, similar to uniprot|P47095 Saccharomyces cerevisiae YJR024c, similar to Saccharomyces cerevisiae YJR024C; ancestral locus Anc_5.129
YALI1_C28513g	Compare to YALI0C20449g, similar to uniprot|P42940 Saccharomyces cerevisiae YGR207c ETF-BETA electron-transferring flavoprotein beta chain, similar to Saccharomyces cerevisiae YGR207C; ancestral locus Anc_5.126
YALI1_C28551g	Compare to YALI0C20471g, similar to DEHA0D08349g Debaryomyces hansenii IPF 1505.1
YALI1_C28593g	Compare to YALI0C20625g, similar to Saccharomyces cerevisiae YDL086W; ancestral locus Anc_2.379, similar to uniprot|Q07505 Saccharomyces cerevisiae YDL086w Putative carboxymethylenebutenolidase
YALI1_C28611g	Truncated form of YALI0C20647g, no similarity
YALI1_C28621g	Compare to YALI0C20669g, similar to uniprot|Q9C2D7 Neurospora crassa Related to lincomycin-condensing protein lmbA
YALI1_C28664g	Compare to YALI0C20691g, similar to uniprot|P09230 Yarrowia lipolytica Alkaline extracellular protease precursor
YALI1_C28686g	Compare to YALI0C20713g, no similarity
YALI1_C28706g	Compare to YALI0C20735g, similar to uniprot|P13517 Saccharomyces cerevisiae YIL034c CAP2 F-actin capping protein beta subunit, similar to Saccharomyces cerevisiae CAP2 (YIL034C); ancestral locus Anc_7.208
YALI1_C28716g	Compare to YALI0C20757g, similar to uniprot|Q12200 Saccharomyces cerevisiae YPL006W NCR1
YALI1_C28767g	Compare to YALI0C20779g, weakly similar to uniprot|Q6CH30 Yarrowia lipolytica YALI0A13233g
YALI1_C28817g	Compare to YALI0C20801g, no similarity
YALI1_C28846g	Compare to YALI0C20823g, similar to uniprot|Q8WZL3 Yarrowia lipolytica Opt1 protein
YALI1_C28879g	Compare to YALI0C20889g, similar to uniprot|Q9US46 Schizosaccharomyces pombe Conserved hypothetical C3HC4 type zinc finger protein
YALI1_C28895g	Compare to YALI0C20911g, similar to uniprot|Q9C454 Emericella nidulans Transmembrane protein UsgS
YALI1_C28963g	Compare to YALI0C20933g, similar to uniprot|P40562 Saccharomyces cerevisiae Putative ATP-dependent RNA helicase YIR002C
YALI1_C28997g	Compare to YALI0C20955g, no similarity
YALI1_C29021g	Compare to YALI0C20977g, weakly similar to uniprot|Q6C189 Yarrowia lipolytica YALI0F18326g
YALI1_C29052g	Compare to YALI0C20999g, similar to Saccharomyces cerevisiae CCT7 (YJL111W); ancestral locus Anc_1.248, highly similar to uniprot|P42943 Saccharomyces cerevisiae YJL111w CCT7 component of chaperonin-containing T-complex P10.3.f8.1
YALI1_C29066g	Compare to YALI0C21021g, similar to uniprot|Q8NJZ8 Emericella nidulans Theta class glutathione S-transferase (EC 2.5.1.18)
YALI1_C29080g	Compare to YALI0C21043g, similar to uniprot|O14313 Schizosaccharomyces pombe Peroxisomal membrane protein pmp20
YALI1_C29104g	Compare to YALI0C21065g, similar to Saccharomyces cerevisiae GLG2 (YJL137C) and GLG1 (YKR058W); ancestral locus Anc_1.212, some similarities with uniprot|P47011 Saccharomyces cerevisiae YJL137c GLG2 self-glucosylating initiator of glycogen synthesis P2.283.f2.1
YALI1_C29141g	Compare to YALI0C21087g, similar to Saccharomyces cerevisiae CDC10 (YCR002C); ancestral locus Anc_1.419, similar to uniprot|P25342 Saccharomyces cerevisiae YCR002c CDC10 cell division control protein P7.7.f7.1
YALI1_C29148g	Compare to YALI0C21109g, similar to Saccharomyces cerevisiae MRPL32 (YCR003W); ancestral locus Anc_1.420, similar to uniprot|P25348 Saccharomyces cerevisiae YCR003w MRPL32 ribosomal protein YmL32 mitochondrial
YALI1_C29158g	Compare to YALI0C21131g, weakly similar to uniprot|Q8R3N6 Mus musculus Similar to nuclear matrix protein p84
YALI1_C29202g	Converted to coding from non-coding YALI0C21153g, no similarity frameshift no start
YALI1_C29261g	Compare to YALI0C21186g, no similarity
YALI1_C29302g	Compare to YALI0C21219g, no similarity
YALI1_C29344g	Compare to YALI0C21252g, highly similar to uniprot|Q6CI06 Yarrowia lipolytica YALI0A02783g
YALI1_C29355g	Compare to YALI0C21274g, highly similar to uniprot|Q6CB79 Yarrowia lipolytica YALI0C21252g
YALI1_C29382g	Compare to YALI0C21296g, no similarity
YALI1_C29402g	Compare to YALI0C21318g, similar to Saccharomyces cerevisiae YGL250W; ancestral locus Anc_3.577, no similarity
YALI1_C29447g	Compare to YALI0C21340g, similar to Saccharomyces cerevisiae SKN7 (YHR206W) and HMS2 (YJR147W); ancestral locus Anc_4.385, weakly similar to uniprot|P39928 Saccharomyces cerevisiae YIL147c SLN1 two-component signal transducer
YALI1_C29506g	Compare to YALI0C21362g, similar to Saccharomyces cerevisiae YHB1 (YGR234W); ancestral locus Anc_5.93, similar to uniprot|P39676 Saccharomyces cerevisiae YGR234w YHB1 flavohemoglobin
YALI1_C29529g	Compare to YALI0C21384g, no similarity possibly noncoding
YALI1_C29538g	Compare to YALI0C21406g, similar to uniprot|P36035 Saccharomyces cerevisiae YKL217w JEN1 carboxylic acid transporter protein
YALI1_C29576g	Compare to YALI0C21428g, no similarity
YALI1_C29584g	Compare to YALI0C21450g, similar to uniprot|P47085 Saccharomyces cerevisiae YJR008w, similar to Saccharomyces cerevisiae YJR008W; ancestral locus Anc_5.156
YALI1_C29618g	Compare to YALI0C21472g, similar to uniprot|P06634 Saccharomyces cerevisiae YOR204w DED1 ATP-dependent RNA helicase P28.1.f22.1
YALI1_C29648g	Compare to YALI0C21494g, similar to DEHA0E14124g Debaryomyces hansenii IPF 11804.1
YALI1_C29676g	Compare to YALI0C21516g, weakly similar to uniprot|Q15166 Homo sapiens Serum paraoxonase/arylesterase 3
YALI1_C29762g	Compare to YALI0C21538g, some similarities with wi|NCU08273.1 Neurospora crassa NCU08273.1 hypothetical protein 5' end, similar to Saccharomyces cerevisiae IST2 (YBR086C); ancestral locus Anc_3.323
YALI1_C29810g	Compare to YALI0C21560g, highly similar to uniprot|P14126 Saccharomyces cerevisiae YOR063w TCM1 60S large subunit ribosomal protein L3.e, similar to Saccharomyces cerevisiae RPL3 (YOR063W); ancestral locus Anc_5.664
YALI1_C29854g	Compare to YALI0C21582g, similar to uniprot|Q8X073 Neurospora crassa Related to pyruvate dehydrogenase kinase
YALI1_C29902g	Compare to YALI0C21604g, similar to uniprot|P00729 Saccharomyces cerevisiae YMR297w PRC1 carboxypeptidase y serine-type protease P3.65. f3.1
YALI1_C29920g	Compare to YALI0C21626g, some similarities with uniprot|P53146 Saccharomyces cerevisiae YGL098w, similar to Saccharomyces cerevisiae USE1 (YGL098W); ancestral locus Anc_6.164
YALI1_C29926g	Compare to YALI0C21648g, similar to uniprot|P14284 Saccharomyces cerevisiae YPL167C DNA polymerase zeta catalytic subunit (EC 2.7.7.7), similar to Saccharomyces cerevisiae REV3 (YPL167C); ancestral locus Anc_8.694
YALI1_C29968g	Compare to YALI0C21670g, no similarity
YALI1_C29983g	Compare to YALI0C21692g, similar to Saccharomyces cerevisiae RFC5 (YBR087W); ancestral locus Anc_3.326, similar to uniprot|P38251 Saccharomyces cerevisiae YBR087w RFC5 DNA replication factor C 40 KD subunit P6.11. f4.1
YALI1_C30007g	Compare to YALI0C21736g, no similarity possibly noncoding
YALI1_C30022g	Compare to YALI0C21758g, similar to KLLA0D07348g Kluyveromyces lactis IPF 4914.1
YALI1_C30078g	Compare to YALI0C21780g, similar to Saccharomyces cerevisiae MRS5 (YBR091C); ancestral locus Anc_3.334, weakly similar to uniprot|P87108 Saccharomyces cerevisiae YHR005ca Mitochondrial import inner membrane translocase subunit TIM10 (Mitochondrial intermembrane protein MRS11)
YALI1_C30086g	Compare to YALI0C21789g, gnl|GLV|YALI0C21789g [Yarrowia lipolytica] NADH-ubiquinone reductase complex subunit 9 79 kDa (complex I)
YALI1_C30119g	Truncated form of YALI0C21802g, similar to Saccharomyces cerevisiae COP1 (YDL145C); ancestral locus Anc_7.322, similar to uniprot|P41811 Saccharomyces cerevisiae YGL137w SEC27 coatomer complex beta chain (beta -cop) of secretory pathway vesicles P29.1.f7.1
YALI1_C30130g	Compare to YALI0C21824g, similar to Saccharomyces cerevisiae SAR1 (YPL218W); ancestral locus Anc_6.235, similar to uniprot|P20606 Saccharomyces cerevisiae YPL218w SAR1 GTP-binding protein of the ARF family P7.3.f6. 1 no start
YALI1_C30181g	Compare to YALI0C21846g, highly similar to uniprot|Q08965 Saccharomyces cerevisiae YPL217c BMS1 Ribosome biogenesis protein, similar to Saccharomyces cerevisiae BMS1 (YPL217C); ancestral locus Anc_6.234
YALI1_C30187g	Compare to YALI0C21868g, similar to Saccharomyces cerevisiae RVB1 (YDR190C); ancestral locus Anc_8.395, highly similar to uniprot|Q03940 Saccharomyces cerevisiae YDR190c RVB1 RUVB-like protein P2.38.f2.1
YALI1_C30205g	Compare to YALI0C21890g, weakly similar to uniprot|Q9URK6 Schizosaccharomyces pombe and DEHA0F09471g Debaryomyces hansenii IPF 8385.1
YALI1_C30235g	Compare to YALI0C21912g, similar to uniprot|Q6CIA4 Yarrowia lipolytica YALI0A00198g
YALI1_C30255g	Compare to YALI0C21934g, similar to Saccharomyces cerevisiae YBL036C; ancestral locus Anc_3.324, similar to uniprot|P38197 Saccharomyces cerevisiae YBL036c
YALI1_C30287g	Compare to YALI0C21956g, similar to Saccharomyces cerevisiae LSG1 (YGL099W); ancestral locus Anc_6.163, similar to uniprot|P53145 Saccharomyces cerevisiae YGL099w
YALI1_C30310g	Compare to YALI0C21978g, similar to uniprot|Q6C1D9 Yarrowia lipolytica YALI0F17160g
YALI1_C30320g	Compare to YALI0C22000g, similar to uniprot|Q04432 Saccharomyces cerevisiae YDR533c
YALI1_C30367g	Compare to YALI0C22022g, similar to uniprot|Q6CHL9 Yarrowia lipolytica YALI0A07557g
YALI1_C30392g	Compare to YALI0C22044g, similar to uniprot|Q6CFI2 Yarrowia lipolytica YALI0B06776g
YALI1_C30399g	Compare to YALI0C22066g, similar to uniprot|P34077 Saccharomyces cerevisiae YFR002w NIC96 nuclear pore protein, similar to Saccharomyces cerevisiae NIC96 (YFR002W); ancestral locus Anc_8.94
YALI1_C30440g	Compare to YALI0C22088g, similar to uniprot|P38716 Saccharomyces cerevisiae YHR112c similarity to cystathionine gamma-synthases P5.26. f3.1
YALI1_C30454g	Compare to YALI0C22121g, weakly similar to uniprot|Q8D5F7 Vibrio vulnificus Predicted thioesterase
YALI1_C30474g	Compare to YALI0C22143g, no similarity
YALI1_C30514g	Compare to YALI0C22165g, similar to uniprot|P53199 Saccharomyces cerevisiae YGL001c ERG26 C-3 sterol dehydrogenase (C-4 decarboxylase), similar to Saccharomyces cerevisiae ERG26 (YGL001C); ancestral locus Anc_4.126
YALI1_C30524g	Compare to YALI0C22187g, weakly similar to uniprot|P38813 Saccharomyces cerevisiae YHR101c BIG1 big cells phenotype
YALI1_C30541g	Compare to YALI0C22209g, similar to Saccharomyces cerevisiae ESC2 (YDR363W); ancestral locus Anc_5.425, weakly similar to CAGL0A02706g Candida glabrata IPF 1290.1
YALI1_C30614g	Compare to YALI0C22231g, similar to Saccharomyces cerevisiae TFC3 (YAL001C); ancestral locus Anc_4.128, weakly similar to uniprot|Q9UST7 Schizosaccharomyces pombe RNA polymerase III Transcription factor (TF)IIIC subunit
YALI1_C30632g	Truncated form of YALI0C22253g, similar to Saccharomyces cerevisiae NUP60 (YAR002W); ancestral locus Anc_4.125, weakly similar to uniprot|P39705 Saccharomyces cerevisiae YAR002w FUN17 peroxisomal matrix protein import
YALI1_C30653g	Compare to YALI0C22275g, similar to Saccharomyces cerevisiae PEP12 (YOR036W); ancestral locus Anc_5.630, similar to uniprot|P32854 Saccharomyces cerevisiae YOR036w PEP12 syntaxin (T-SNARE) vacuolar
YALI1_C30672g	Truncated form of YALI0C22297g, no similarity possibly noncoding
YALI1_C30683g	Compare to YALI0C22319g, similar to uniprot|P53200 Saccharomyces cerevisiae YGR001c, similar to Saccharomyces cerevisiae YGR001C; ancestral locus Anc_4.127
YALI1_C30706g	Compare to YALI0C22341g, similar to Saccharomyces cerevisiae YOR118W; ancestral locus Anc_5.431, weakly similar to uniprot|Q12108 Saccharomyces cerevisiae YOR118w
YALI1_C30749g	Compare to YALI0C22363g, weakly similar to uniprot|P53322 Saccharomyces cerevisiae YGR260w TNA1 similarity to allantoate transport protein P10.2.f5.1
YALI1_C30795g	Compare to YALI0C22385g, similar to Saccharomyces cerevisiae RIO1 (YOR119C); ancestral locus Anc_5.432, similar to uniprot|Q12196 Saccharomyces cerevisiae YOR119c RIO1 family
YALI1_C30884g	Compare to YALI0C22462g, similar to Saccharomyces cerevisiae LDB17 (YDL146W); ancestral locus Anc_7.324, similar to uniprot|CAD60713 Podospora anserina
YALI1_C30901g	Compare to YALI0C22484g, similar to uniprot|P53769 Saccharomyces cerevisiae YLR323c, similar to Saccharomyces cerevisiae CWC24 (YLR323C); ancestral locus Anc_4.139
YALI1_C30936g	Compare to YALI0C22506g, no similarity
YALI1_C30946g	Compare to YALI0C22528g, similar to uniprot|O94742 Saccharomyces cerevisiae YDR363w-a SEM1 Component of the lid subcomplex of the regulatory subunit of the 26S proteasome
YALI1_C30964g	Compare to YALI0C22550g, similar to uniprot|P04051 Saccharomyces cerevisiae YOR116c RPO31 DNA-directed RNA polymerase III 160 KD subunit
YALI1_C31047g	Compare to YALI0C22572g, similar to DEHA0D09933g Debaryomyces hansenii IPF 1370.1
YALI1_C31086g	Compare to YALI0C22594g, weakly similar to uniprot|Q86ZH9 Neurospora crassa 64C2.200 Related to putative tartrate transporter
YALI1_C31122g	Compare to YALI0C22616g, uniprot|Q8WZL3 Yarrowia lipolytica Opt1 protein YlOpt1
YALI1_C31163g	Compare to YALI0C22638g, no similarity
YALI1_C31199g	Compare to YALI0C22660g, weakly similar to uniprot|Q08902 Saccharomyces cerevisiae YOR378W
YALI1_C31243g	Truncated form of YALI0C22682g, some similarities with uniprot|P42944 Saccharomyces cerevisiae YJL110c GZF3 transcriptional repressor
YALI1_C31252g	Truncated form of YALI0C22682g, some similarities with uniprot|P42944 Saccharomyces cerevisiae YJL110c GZF3 transcriptional repressor
YALI1_C31281g	Compare to YALI0C22704g, similar to uniprot|P47025 Saccharomyces cerevisiae YJL112W
YALI1_C31389g	Compare to YALI0C22726g, no similarity
YALI1_C31408g	Compare to YALI0C22748g, similar to uniprot|Q9WXD6 Brevibacterium linens 1 4- butanediol diacrylate esterase
YALI1_C31453g	Compare to YALI0C22770g, uniprot|Q9P496 Yarrowia lipolytica Protein kinase cla4 YlCLA4
YALI1_C31510g	Compare to YALI0C22792g, similar to CA2809|CaAMO1 Candida albicans CaAMO1 amine oxidase
YALI1_C31549g	Compare to YALI0C22836g, some similarities with uniprot|Q8TFK5 Yarrowia lipolytica Cell wall protein
YALI1_C31576g	Compare to YALI0C22858g, similar to Saccharomyces cerevisiae SWD1 (YAR003W); ancestral locus Anc_4.123, similar to uniprot|O42858 Schizosaccharomyces pombe Hypothetical WD-repeat protein C23H3.05c
YALI1_C31626g	Compare to YALI0C22880g, no similarity
YALI1_C31649g	Compare to YALI0C22924g, weakly similar to uniprot|P08640 Saccharomyces cerevisiae YIR019c STA1 extracellular alpha-1 4-glucan glucosidase
YALI1_C31684g	Compare to YALI0C22946g, similar to Saccharomyces cerevisiae VPS8 (YAL002W); ancestral locus Anc_4.129, weakly similar to uniprot|P39702 Saccharomyces cerevisiae YAL002w VPS8 vacuolar sorting protein
YALI1_C31759g	Compare to YALI0C22968g, some similarities with uniprot|Q92609 Homo sapiens TBC1 domain family member 5, similar to Saccharomyces cerevisiae GYP6 (YJL044C); ancestral locus Anc_5.258
YALI1_C31791g	Compare to YALI0C22990g, similar to uniprot|Q8NJJ7 Pichia angusta Transcriptional activator Mut3p
YALI1_C31830g	Compare to YALI0C23034g, some similarities with uniprot|Q9UR39 Schizosaccharomyces pombe HST4P
YALI1_C31848g	Compare to YALI0C23056g, similar to uniprot|P53125 Saccharomyces cerevisiae YGL133w ITC1 subunit of ISW2 chromatin remodelling complex P2.44.f2.1, similar to Saccharomyces cerevisiae ITC1 (YGL133W) and YPL216W; ancestral locus Anc_6.233
YALI1_C31888g	Compare to YALI0C23078g, weakly similar to uniprot|Q12284 Saccharomyces cerevisiae YPR037C ERV2 protein mitochondrial precursor, similar to Saccharomyces cerevisiae ERV2 (YPR037C); ancestral locus Anc_7.456
YALI1_C31900g	Compare to YALI0C23100g, similar to Saccharomyces cerevisiae TIP41 (YPR040W); ancestral locus Anc_7.457, similar to uniprot|Q12199 Saccharomyces cerevisiae YPR040W protein
YALI1_C31918g	Compare to YALI0C23122g, similar to Saccharomyces cerevisiae YNL168C; ancestral locus Anc_2.85, similar to uniprot|Q9P7L4 Schizosaccharomyces pombe Similar to prokaryotic 2-hydroxyhepta-2 4-diene-1 7-dioate isomerase
YALI1_C31971g	Compare to YALI0C23144g, similar to Saccharomyces cerevisiae KEM1 (YGL173C); ancestral locus Anc_8.126, similar to uniprot|P22147 Saccharomyces cerevisiae YGL173c KEM1 multifunctional nuclease P2.117.f2.1
YALI1_C31989g	Compare to YALI0C23166g, similar to Saccharomyces cerevisiae NUP49 (YGL172W); ancestral locus Anc_8.125, similar to uniprot|Q02199 Saccharomyces cerevisiae YGL172w NUP49 nuclear pore protein P2.390.f2.1
YALI1_C32010g	Compare to YALI0C23188g, weakly similar to uniprot|Q8NIY9 Neurospora crassa Conserved hypothetical protein, similar to Saccharomyces cerevisiae YJR088C; ancestral locus Anc_7.458
YALI1_C32031g	Compare to YALI0C23210g, similar to Saccharomyces cerevisiae DCD1 (YHR144C); ancestral locus Anc_2.84, similar to uniprot|P06773 Saccharomyces cerevisiae YHR144c DCD1 deoxycytidylate deaminase
YALI1_C32034g	Compare to YALI0C23224g, weakly similar to uniprot|Q7RZL5 Neurospora crassa NCU00350.1 hypothetical protein and to uniprot|AAH15087 Mus musculus Epoxide hydrolase 2 and cytoplasmic
YALI1_C32049g	Compare to YALI0C23232g, weakly similar to uniprot|Q12102 Saccharomyces cerevisiae YLR115w CFT2 cleavage and polyadenylation specificity factor part of CF II, similar to Saccharomyces cerevisiae CFT2 (YLR115W); ancestral locus Anc_8.308
YALI1_C32079g	Compare to YALI0C23254g, no similarity
YALI1_C32106g	Compare to YALI0C23276g, weakly similar to wi|NCU00918.1 Neurospora crassa NCU00918.1 predicted protein
YALI1_C32119g	Compare to YALI0C23298g, similar to uniprot|Q96VC8 Yarrowia lipolytica Glyoxylate pathway regulator GPR1
YALI1_C32137g	Compare to YALI0C23320g, similar to Saccharomyces cerevisiae SRB2 (YHR041C); ancestral locus Anc_5.299, weakly similar to uniprot|P34162 Saccharomyces cerevisiae YHR041c SRB2 DNA-directed RNA polymerase II holoenzyme and Kornberg s mediator (SRB) subcomplex subunit
YALI1_C32156g	Compare to YALI0C23342g, similar to uniprot|P31381 Saccharomyces cerevisiae YAL022c FUN26 intracellular membrane protein involved in nucleoside transport, similar to Saccharomyces cerevisiae FUN26 (YAL022C); ancestral locus Anc_7.77
YALI1_C32184g	Compare to YALI0C23364g, similar to uniprot|P31382 Saccharomyces cerevisiae YAL023c PMT2 mannosyltransferase, similar to Saccharomyces cerevisiae PMT2 (YAL023C) and PMT3 (YOR321W); ancestral locus Anc_7.76
YALI1_C32223g	Compare to YALI0C23379g, gnl|GLV|YALI0C23379g [Yarrowia lipolytica] similar to uniprot|Q8TGE9 Aspergillus fumigatus (Sartorya fumigata) Hypothetical protein AfA14E5.29b
YALI1_C32253g	Compare to YALI0C23386g, similar to Saccharomyces cerevisiae ELP2 (YGR200C); ancestral locus Anc_5.139, similar to uniprot|P42935 Saccharomyces cerevisiae YGR200c ELP2 90 kDa subunit of elongator and elongating RNA polymerase II
YALI1_C32276g	Compare to YALI0C23408g, similar to Saccharomyces cerevisiae ILV3 (YJR016C); ancestral locus Anc_5.138, highly similar to uniprot|P39522 Saccharomyces cerevisiae YJR016c ILV3 Dihydroxy-acid dehydratase mitochondrial precursor
YALI1_C32294g	Compare to YALI0C23430g, no similarity
YALI1_C32352g	Compare to YALI0C23452g, no similarity
YALI1_C32392g	Compare to YALI0C23474g, no similarity
YALI1_C32424g	Compare to YALI0C23496g, similar to Saccharomyces cerevisiae YJR112W-A; ancestral locus Anc_7.487, some similarities with uniprot|O13689 Schizosaccharomyces pombe Hypothetical protein C11E3.10
YALI1_C32461g	Compare to YALI0C23518g, no similarity
YALI1_C32483g	Compare to YALI0C23540g, no similarity
YALI1_C32496g	Compare to YALI0C23562g, similar to uniprot|Q02890 Saccharomyces cerevisiae YPL096w PNG1 protein with de-N-glycosylation function, similar to Saccharomyces cerevisiae PNG1 (YPL096W); ancestral locus Anc_8.575
YALI1_C32517g	Converted to coding from non-coding YALI0C23584g, similar to uniprot|P25371 Saccharomyces cerevisiae YCR011c ADP1 ATP-dependent permease frameshift
YALI1_C32609g	Compare to YALI0C23617g, uniprot|Q96VC8 Yarrowia lipolytica Glyoxylate pathway regulator
YALI1_C32633g	Compare to YALI0C23639g, similar to Saccharomyces cerevisiae CHL1 (YPL008W); ancestral locus Anc_8.81, similar to uniprot|P22516 Saccharomyces cerevisiae YPL008w CHL1 protein of the DEAH box family
YALI1_C32667g	Compare to YALI0C23661g, similar to uniprot|P00729 Saccharomyces cerevisiae YMR297w PRC1 carboxypeptidase y serine-type protease
YALI1_C32706g	Compare to YALI0C23683g, weakly similar to uniprot|O94417 Schizosaccharomyces pombe Cell cycle control protein cwf26, similar to Saccharomyces cerevisiae BUD13 (YGL174W); ancestral locus Anc_8.127
YALI1_C32721g	Compare to YALI0C23705g, similar to uniprot|Q6C0R8 Yarrowia lipolytica YALI0F22319g
YALI1_C32737g	Compare to YALI0C23727g, weakly similar to uniprot|P46946 Saccharomyces cerevisiae YGL175c SAE2 meiotic recombination protein
YALI1_C32771g	Compare to YALI0C23749g, similar to uniprot|P28737 Saccharomyces cerevisiae YGR028w MSP1 intra-mitochondrial sorting protein
YALI1_C32786g	Compare to YALI0C23771g, weakly similar to DEHA0G01045g Debaryomyces hansenii IPF 1013.1
YALI1_C32810g	Compare to YALI0C23793g, similar to uniprot|P47026 Saccharomyces cerevisiae YJL091c GWT1 Related to human G protein-coupled receptor, similar to Saccharomyces cerevisiae GWT1 (YJL091C); ancestral locus Anc_1.275
YALI1_C32823g	Compare to YALI0C23815g, weakly similar to uniprot|Q06563 Saccharomyces cerevisiae YLR251w Related to peroxisomal rat membrane protein PMP22, similar to Saccharomyces cerevisiae SYM1 (YLR251W); ancestral locus Anc_1.384
YALI1_C32838g	Compare to YALI0C23837g, no similarity
YALI1_C32886g	Compare to YALI0C23859g, uniprot|O74938 Yarrowia lipolytica POX5 Acyl-CoA oxidase 5 (EC 1.3.3.6), peroxisomal
YALI1_C32914g	Compare to YALI0C23881g, no similarity
YALI1_C32921g	Compare to YALI0C23903g, similar to Saccharomyces cerevisiae EDE1 (YBL047C); ancestral locus Anc_7.488, weakly similar to uniprot|P34216 Saccharomyces cerevisiae YBL047c
YALI1_C32972g	Compare to YALI0C23925g, similar to Saccharomyces cerevisiae NNF1 (YJR112W); ancestral locus Anc_7.489, weakly similar to uniprot|P47149 Saccharomyces cerevisiae YJR112w NNF1 nuclear envelope protein
YALI1_C32975g	Compare to YALI0C23947g, similar to uniprot|P32602 Saccharomyces cerevisiae YBL050w SEC17 transport vesicle fusion protein, similar to Saccharomyces cerevisiae SEC17 (YBL050W); ancestral locus Anc_7.493
YALI1_C33005g	Compare to YALI0C23969g, similar to Saccharomyces cerevisiae CPA2 (YJR109C); ancestral locus Anc_7.494, highly similar to uniprot|P03965 Saccharomyces cerevisiae YJR109c CPA2 arginine-specific carbamoylphosphate synthase large chain
YALI1_C33055g	Compare to YALI0C23991g, similar to uniprot|Q8J2S3 Hericium erinaceum Ribonuclease T2
YALI1_C33071g	Compare to YALI0C24013g, weakly similar to uniprot|P28007 Saccharomyces cerevisiae YHR089c GAR1 nucleolar rRNA processing protein, similar to Saccharomyces cerevisiae YDR336W; ancestral locus Anc_5.387
YALI1_C33086g	Compare to YALI0C24035g, no similarity
YALI1_C33098g	Compare to YALI0C24057g, similar to Saccharomyces cerevisiae GAR1 (YHR089C); ancestral locus Anc_5.388, similar to uniprot|P28007 Saccharomyces cerevisiae YHR089c GAR1 nucleolar rRNA processing protein 5 end
YALI1_C33100g	Compare to YALI0C24079g, similar to uniprot|Q9VGG9 Drosophila melanogaster CG31368-PA
YALI1_C33152g	Compare to YALI0C24101g, highly similar to uniprot|P11154 Saccharomyces cerevisiae YGL062w PYC1 pyruvate carboxylase 1
YALI1_C33193g	Compare to YALI0C24123g, similar to Saccharomyces cerevisiae MCM21 (YDR318W); ancestral locus Anc_5.349, weakly similar to uniprot|Q06675 Saccharomyces cerevisiae YDR318W Chromosome IV
YALI1_C33214g	Compare to YALI0C24145g, similar to Saccharomyces cerevisiae YDR319C; ancestral locus Anc_5.350, some similarities with uniprot|Q9HGM4 Schizosaccharomyces pombe Hypothetical 28.8 kDa protein
YALI1_C33217g	Compare to YALI0C24167g, similar to Saccharomyces cerevisiae SOH1 (YGL127C); ancestral locus Anc_6.116, similar to uniprot|P38633 Saccharomyces cerevisiae YGL127c SOH1 no start
YALI1_C33245g	Compare to YALI0C24189g, no similarity
YALI1_C33254g	Compare to YALI0C24211g, no similarity
YALI1_C33270g	Compare to YALI0C24233g, similar to uniprot|O13389 Emericella nidulans serine O- acetyltransferase
YALI1_C33299g	Compare to YALI0C24255g, similar to uniprot|Q03148 Saccharomyces cerevisiae YMR096w SNZ1 stationary phase protein
YALI1_C33314g	Compare to YALI0C24277g, weakly similar to uniprot|P21771 Saccharomyces cerevisiae YDR337w MRPS28 ribosomal protein of the small subunit mitochondrial, similar to Saccharomyces cerevisiae MRPS28 (YDR337W); ancestral locus Anc_5.389
YALI1_C33332g	Compare to YALI0C24299g, similar to Saccharomyces cerevisiae SLX5 (YDL013W); ancestral locus Anc_3.186, weakly similar to DEHA-IPF12189.1 Debaryomyces hansenii
YALI1_C33353g	Compare to YALI0C24321g, weakly similar to uniprot|P43568 Saccharomyces cerevisiae YFL029c CAK1 cdk-activating protein kinase
YALI1_C33354g	Compare to YALI0C24332g, weakly similar to DEHA0F14157g Debaryomyces hansenii IPF 8004.1, similar to Saccharomyces cerevisiae GYP8 (YFL027C); ancestral locus Anc_8.44
YALI1_C33406g	Compare to YALI0C24354g, similar to uniprot|P29465 Saccharomyces cerevisiae YBR023c CHS3 chitin synthase III, similar to Saccharomyces cerevisiae CHS3 (YBR023C); ancestral locus Anc_3.223
YALI1_C33427g	Compare to YALI0C24376g, weakly similar to uniprot|Q10140 Schizosaccharomyces pombe Hypothetical protein C3H8.04 in chromosome I
YALI1_C33444g	Compare to YALI0C24398g, weakly similar to uniprot|Q03973 Saccharomyces cerevisiae YDR174w HMO1 Non-histone protein
YALI1_C33458g	Compare to YALI0C24420g, similar to uniprot|P29547 Saccharomyces cerevisiae YPL048w CAM1 translation elongation factor eEF1 gamma homologue
YALI1_C33550g	Converted to coding from non-coding YALI0C24442g, weakly similar to uniprot|Q01375 Neurospora crassa Contains reverse transcriptase and cys finger domains
YALI1_D00040g	Compare to YALI0D00110g, no similarity
YALI1_D00094g	Compare to YALI0D00132g, similar to uniprot|Q9P3B9 Neurospora crassa related to myo-inositol permease
YALI1_D00173g	Compare to YALI0D00176g, similar to uniprot|Q873I6 Neurospora crassa B9B11. 130 Probable sterol carrier protein Neurospora crassa
YALI1_D00221g	Truncated form of YALI0D00198g, no similarity
YALI1_D00231g	Compare to YALI0D00220g, similar to uniprot|P53193 Saccharomyces cerevisiae YGL018c JAC1 molecular chaperone, similar to Saccharomyces cerevisiae JAC1 (YGL018C); ancestral locus Anc_4.103
YALI1_D00232g	Compare to YALI0D00231g, no similarity
YALI1_D00264g	Compare to YALI0D00253g, similar to Saccharomyces cerevisiae YOR166C; ancestral locus Anc_6.54, weakly similar to uniprot|Q12104 Saccharomyces cerevisiae YOR166c Saccharomyces cerevisiae
YALI1_D00273g	Compare to YALI0D00275g, similar to Saccharomyces cerevisiae YGR026W; ancestral locus Anc_4.162, weakly similar to uniprot|Q12164 Saccharomyces cerevisiae YLL023c
YALI1_D00311g	Compare to YALI0D00297g, similar to Saccharomyces cerevisiae YNL313C; ancestral locus Anc_3.32, similar to uniprot|P42842 Saccharomyces cerevisiae YNL313c
YALI1_D00326g	Compare to YALI0D00319g, similar to Saccharomyces cerevisiae ALR1 (YOL130W); ancestral locus Anc_3.38, some similarities with uniprot|Q08269 Saccharomyces cerevisiae YOL130w ALR1 divalent cation transporter
YALI1_D00352g	Compare to YALI0D00341g, no similarity
YALI1_D00376g	Compare to YALI0D00363g, weakly similar to uniprot|P11636 Neurospora crassa Quinate permease
YALI1_D00406g	Compare to YALI0D00385g, weakly similar to uniprot|Q08412 Saccharomyces cerevisiae ORF YOR042W, similar to Saccharomyces cerevisiae DON1 (YDR273W) and CUE5 (YOR042W); ancestral locus Anc_5.638
YALI1_D00422g	Compare to YALI0D00407g, similar to uniprot|P40445 Saccharomyces cerevisiae Putative transporter YIL166C
YALI1_D00449g	Compare to YALI0D00429g, similar to Saccharomyces cerevisiae SBA1 (YKL117W); ancestral locus Anc_2.455, weakly similar to uniprot|P28707 Saccharomyces cerevisiae YKL117w SBA1 Hsp90 (Ninety) Associated Co- chaperone
YALI1_D00474g	Compare to YALI0D00451g, weakly similar to KLLA0E14586g Kluyveromyces lactis IPF 2857.1
YALI1_D00487g	Compare to YALI0D00473g, no similarity
YALI1_D00515g	Compare to YALI0D00495g, similar to uniprot|P32837 Saccharomyces cerevisiae YDL210w UGA4 GABA-specific high-affinity permease
YALI1_D00537g	Compare to YALI0D00539g, weakly similar to uniprot|P53207 Saccharomyces cerevisiae YGR013w SNU71 associated with U1 snRNP no counterpart in mammalian U1 snRNP
YALI1_D00577g	Compare to YALI0D00561g, similar to Saccharomyces cerevisiae SYF1 (YDR416W); ancestral locus Anc_5.519, similar to uniprot|Q9P7R9 Schizosaccharomyces pombe Cell cycle control protein cwf3
YALI1_D00581g	Compare to YALI0D00583g, similar to Saccharomyces cerevisiae VMA8 (YEL051W); ancestral locus Anc_5.518, highly similar to uniprot|P32610 Saccharomyces cerevisiae YEL051w VMA8 H+-ATPsynthase V1 domain 32 KD subunit vacuolar
YALI1_D00614g	Compare to YALI0D00605g, similar to uniprot|Q96VU8 Neurospora crassa Cystathionine beta-lyase (EC 4.4.1.8)
YALI1_D00663g	Compare to YALI0D00627g, weakly similar to uniprot|P32334 Saccharomyces cerevisiae YGR014w MSB2 multicopy suppressor of a CDC24 bud emergence defect, similar to Saccharomyces cerevisiae HKR1 (YDR420W); ancestral locus Anc_5.524
YALI1_D00703g	Compare to YALI0D00649g, similar to Saccharomyces cerevisiae AFG1 (YEL052W); ancestral locus Anc_5.520, similar to uniprot|P32317 Saccharomyces cerevisiae YEL052w AFG1 ATPase family gene
YALI1_D00724g	Compare to YALI0D00671g, similar to uniprot|Q9P3G4 Neurospora crassa Conserved hypothetical protein
YALI1_D00747g	Compare to YALI0D00693g, similar to uniprot|P38682 Saccharomyces cerevisiae YER122c GLO3 zinc finger protein
YALI1_D00754g	Compare to YALI0D00715g, similar to Saccharomyces cerevisiae TIM21 (YGR033C); ancestral locus Anc_4.175, weakly similar to uniprot|P53220 Saccharomyces cerevisiae YGR033c
YALI1_D00766g	Compare to YALI0D00737g, uniprot|Q9UUT9 Yarrowia lipolytica Subunit NUHM of protein NADH:ubiquinone oxidoreductase (Complex I) (EC 1.6. 99.3)
YALI1_D00798g	Compare to YALI0D00759g, weakly similar to uniprot|P32804 Saccharomyces cerevisiae YGL255w ZRT1 high-affinity zinc transport protein
YALI1_D00824g	Compare to YALI0D00781g, no similarity
YALI1_D00848g	Compare to YALI0D00803g, weakly similar to uniprot|Q9P7X2 Schizosaccharomyces pombe Hypothetical coiled-coil protein
YALI1_D00888g	Compare to YALI0D00825g, similar to uniprot|Q8X012 Neurospora crassa Conserved hypothetical protein Putative transaminase
YALI1_D00909g	Compare to YALI0D00847g, similar to Saccharomyces cerevisiae YOL073C; ancestral locus Anc_3.135, similar to uniprot|Q8WZU7 Neurospora crassa Conserved hypothetical protein
YALI1_D00929g	Compare to YALI0D00869g, similar to uniprot|O59805 Schizosaccharomyces pombe Acetamidase
YALI1_D00951g	Compare to YALI0D00891g, uniprot|P87200 Yarrowia lipolytica Peroxisomal membrane protein PEX17 (Peroxin-17)
YALI1_D00973g	Compare to YALI0D00913g, similar to uniprot|P38256 Saccharomyces cerevisiae YBR096w
YALI1_D00995g	Compare to YALI0D00935g, weakly similar to uniprot|P41800 Saccharomyces cerevisiae YLL006w MMM1 required for mitochondrial shape and structure, similar to Saccharomyces cerevisiae MMM1 (YLL006W); ancestral locus Anc_5.210
YALI1_D00996g	Compare to YALI0D00957g, similar to Saccharomyces cerevisiae KRI1 (YNL308C); ancestral locus Anc_3.39, similar to uniprot|P42846 Saccharomyces cerevisiae YNL308c KRI1
YALI1_D01036g	Compare to YALI0D00979g, similar to Saccharomyces cerevisiae CRT10 (YOL063C); ancestral locus Anc_3.163, no similarity
YALI1_D01066g	Compare to YALI0D01001g, no similarity
YALI1_D01075g	Compare to YALI0D01023g, no similarity
YALI1_D01094g	Compare to YALI0D01045g, uniprot|Q9HGU7 Yarrowia lipolytica GTP-binding protein Rho1 GTP-binding protein of the rho subfamily of ras-like proteins
YALI1_D01123g	Compare to YALI0D01067g, similar to Saccharomyces cerevisiae IML1 (YJR138W); ancestral locus Anc_4.373, weakly similar to uniprot|P47170 Saccharomyces cerevisiae YJR138w IML1 involved in chromosomal stability
YALI1_D01188g	Compare to YALI0D01089g, similar to Saccharomyces cerevisiae HOM6 (YJR139C); ancestral locus Anc_4.374, similar to uniprot|P31116 Saccharomyces cerevisiae YJR139c HOM6 homoserine dehydrogenase
YALI1_D01234g	Compare to YALI0D01111g, similar to uniprot|P39932 Saccharomyces cerevisiae YDR536w STL1 member of the sugar permease family
YALI1_D01298g	Compare to YALI0D01133g, similar to Saccharomyces cerevisiae MTR10 (YOR160W); ancestral locus Anc_5.503, similar to uniprot|Q99189 Saccharomyces cerevisiae YOR160W mRNA transport regulator MTR10
YALI1_D01305g	Compare to YALI0D01155g, similar to Saccharomyces cerevisiae SME1 (YOR159C); ancestral locus Anc_5.504, similar to uniprot|Q12330 Saccharomyces cerevisiae YOR159c SME1 spliceosomal snRNA-associated Sm core protein required for mRNA splicing also likely associated with telomerase TLC1 RNA
YALI1_D01317g	Compare to YALI0D01177g, similar to Saccharomyces cerevisiae VPS36 (YLR417W); ancestral locus Anc_4.288, similar to uniprot|Q06696 Saccharomyces cerevisiae YLR417w VPS36 defective in vacuolar protein sorting
YALI1_D01345g	Compare to YALI0D01199g, similar to Saccharomyces cerevisiae HYM1 (YKL189W); ancestral locus Anc_4.289, similar to uniprot|Q06138 Mus musculus MO25 hypothetical calcium-binding protein
YALI1_D01378g	Compare to YALI0D01221g, weakly similar to uniprot|P34225 Saccharomyces cerevisiae YBL060w, similar to Saccharomyces cerevisiae YBL060W; ancestral locus Anc_7.384
YALI1_D01404g	Compare to YALI0D01243g, similar to uniprot|P41816 Saccharomyces cerevisiae YPL171c OYE3 NAPDH dehydrogenase (old yellow enzyme) isoform 3
YALI1_D01431g	Compare to YALI0D01265g, similar to uniprot|P38891 Saccharomyces cerevisiae YHR208w BAT1 branched chain amino acid aminotransferase mitochondrial precursor, similar to Saccharomyces cerevisiae BAT2 (YJR148W) and BAT1 (YHR208W); ancestral locus Anc_4.389
YALI1_D01472g	Compare to YALI0D01287g, no similarity
YALI1_D01489g	Compare to YALI0D01309g, similar to uniprot|P40099 Saccharomyces cerevisiae YER183c FAU1 similarity to human 5 10- methenyltetrahydrofolate synthetase, similar to Saccharomyces cerevisiae FAU1 (YER183C); ancestral locus Anc_4.388
YALI1_D01515g	Compare to YALI0D01331g, weakly similar to uniprot|Q12303 Saccharomyces cerevisiae YLR121c YPS3 GPI-anchored aspartyl protease 3 (yapsin 3)
YALI1_D01548g	Compare to YALI0D01353g, weakly similar to DEHA0B08833g Debaryomyces hansenii
YALI1_D01581g	Compare to YALI0D01375g, no similarity
YALI1_D01632g	Compare to YALI0D01419g, no similarity
YALI1_D01676g	Compare to YALI0D01441g, no similarity
YALI1_D01739g	Compare to YALI0D01463g, some similarities with uniprot|P53968 Saccharomyces cerevisiae YNL027w CRZ1 calcineurin responsive zinc- finger, similar to Saccharomyces cerevisiae CRZ1 (YNL027W); ancestral locus Anc_2.303
YALI1_D01780g	Compare to YALI0D01485g, similar to CA5667|IPF1259 Candida albicans IPF1259 Conserved hypothetical protein, similar to Saccharomyces cerevisiae TRM12 (YML005W); ancestral locus Anc_2.302
YALI1_D01786g	Compare to YALI0D01507g, no similarity
YALI1_D01796g	Compare to YALI0D01529g, weakly similar to uniprot|P18899 Saccharomyces cerevisiae YMR173w DDR48 heat shock protein
YALI1_D01819g	Compare to YALI0D01551g, no similarity
YALI1_D01890g	Truncated form of YALI0D01573g, similar to Saccharomyces cerevisiae PHD1 (YKL043W) and SOK2 (YMR016C); ancestral locus Anc_2.564, uniprot|Q9Y7W9 Yarrowia lipolytica YALI0D01573g MGF1 mycelial growth factor-1 DNA-binding transcription factor
YALI1_D01960g	Compare to YALI0D01606g, similar to Saccharomyces cerevisiae UIP5 (YKR044W); ancestral locus Anc_1.239, weakly similar to uniprot|P36137 Saccharomyces cerevisiae YKR044w hypothetical protein
YALI1_D01967g	Compare to YALI0D01628g, similar to uniprot|Q08647 Saccharomyces cerevisiae YOR243c, similar to Saccharomyces cerevisiae PUS7 (YOR243C); ancestral locus Anc_8.671
YALI1_D02000g	Compare to YALI0D01694g, similar to Saccharomyces cerevisiae SPS19 (YNL202W); ancestral locus Anc_2.47, similar to uniprot|P32573 Saccharomyces cerevisiae YNL202w SPS19 peroxisomal 2 4-dienoyl-CoA reductase
YALI1_D02014g	Compare to YALI0D01716g, weakly similar to DEHA0D01287g Debaryomyces hansenii
YALI1_D02041g	Compare to YALI0D01738g, weakly similar to uniprot|P54007 Saccharomyces cerevisiae YLR460c putative dehydrogenase
YALI1_D02063g	Compare to YALI0D01760g, similar to Saccharomyces cerevisiae YGR127W; ancestral locus Anc_3.487, weakly similar to uniprot|P53275 Saccharomyces cerevisiae YGR127w
YALI1_D02085g	Compare to YALI0D01782g, similar to Saccharomyces cerevisiae RPA34 (YJL148W); ancestral locus Anc_1.201, weakly similar to uniprot|P47006 Saccharomyces cerevisiae YJL148w RPA34 nonessential component of RNA- polI
YALI1_D02087g	Compare to YALI0D01804g, weakly similar to uniprot|P33759 Saccharomyces cerevisiae YBR251w MRPS5 ribosomal protein S5 mitochondrial, similar to Saccharomyces cerevisiae MRPS5 (YBR251W); ancestral locus Anc_7.170
YALI1_D02137g	Compare to YALI0D01892g, similar to uniprot|P53064 Saccharomyces cerevisiae YGL244w RTF1 regulates DNA binding properties of TBP, similar to Saccharomyces cerevisiae RTF1 (YGL244W); ancestral locus Anc_3.567
YALI1_D02150g	Compare to YALI0D01914g, similar to Saccharomyces cerevisiae RMD8 (YFR048W); ancestral locus Anc_3.568, similar to uniprot|P43620 Saccharomyces cerevisiae YFR048w
YALI1_D02180g	Compare to YALI0D01936g, similar to Saccharomyces cerevisiae EOS1 (YNL080C); ancestral locus Anc_2.214, weakly similar to uniprot|P53938 Saccharomyces cerevisiae YNL080c hypothetical protein
YALI1_D02183g	Compare to YALI0D01958g, no similarity
YALI1_D02206g	Compare to YALI0D01980g, similar to uniprot|P40579 Saccharomyces cerevisiae YIR035c similarity to human corticosteroid 11-beta- dehydrogenase
YALI1_D02221g	Compare to YALI0D02002g, similar to Saccharomyces cerevisiae APJ1 (YNL077W); ancestral locus Anc_2.218, similar to uniprot|Q873F3 Neurospora crasa B10C3. 080 Related to HLJ1 protein or dnaJ family
YALI1_D02275g	Compare to YALI0D02024g, some similarities with uniprot|P07267 Saccharomyces cerevisiae YPL154c PEP4 aspartyl protease
YALI1_D02316g	Compare to YALI0D02046g, similar to Saccharomyces cerevisiae YDR352W; ancestral locus Anc_5.408, weakly similar to uniprot|Q06328 Saccharomyces cerevisiae YDR352w
YALI1_D02345g	Compare to YALI0D02068g, no similarity
YALI1_D02348g	Compare to YALI0D02079g, weakly similar to DEHA0E15719g Debaryomyces hansenii
YALI1_D02362g	Compare to YALI0D02101g, similar to uniprot|P06782 Saccharomyces cerevisiae YDR477w SNF1 carbon catabolite derepressing ser/thr protein kinase
YALI1_D02399g	Compare to YALI0D02123g, similar to uniprot|Q9P391 Neurospora crassa B24M22. 170 Conserved hypothetical protein
YALI1_D02416g	Compare to YALI0D02145g, similar to uniprot|P53687 Saccharomyces cerevisiae YOR025W HST3 protein (Homologous to SIR2 protein 3)
YALI1_D02444g	Compare to YALI0D02167g, some similarities with uniprot|P38113 Saccharomyces cerevisiae YBR145w ADH5 alcohol dehydrogenase V
YALI1_D02499g	Compare to YALI0D02189g, weakly similar to uniprot|Q05518 Saccharomyces cerevisiae YDR348c
YALI1_D02546g	Compare to YALI0D02233g, weakly similar to DEHA0A09471g Debaryomyces hansenii IPF 7017.1, similar to Saccharomyces cerevisiae APP1 (YNL094W); ancestral locus Anc_2.193
YALI1_D02563g	Compare to YALI0D02255g, no similarity
YALI1_D02625g	Compare to YALI0D02277g, weakly similar to uniprot|P23254 Saccharomyces cerevisiae YPR074c TKL1 transketolase 1
YALI1_D02682g	Compare to YALI0D02299g, similar to uniprot|P08640 Saccharomyces cerevisiae YIR019c STA1 extracellular alpha-1 4-glucan glucosidase
YALI1_D02781g	Compare to YALI0D02321g, highly similar to uniprot|Q96VU5 Cryptococcus neoformans UDP-glucose dehydrogenase Uxs2p (EC 1.1.1.22)
YALI1_D02804g	Compare to YALI0D02343g, some similarities with uniprot|Q12324 Saccharomyces cerevisiae YOR088W/YOR0887 possible calcium influx channel
YALI1_D02831g	Compare to YALI0D02365g, similar to Saccharomyces cerevisiae PSF3 (YOL146W); ancestral locus Anc_3.4, no similarity
YALI1_D02852g	Compare to YALI0D02387g, similar to Saccharomyces cerevisiae YDR132C and YLR108C; ancestral locus Anc_8.299, weakly similar to uniprot|Q03900 Saccharomyces cerevisiae YDR132c
YALI1_D02874t	Compare to YALI0D26433g, Full length Line element, uniprot|Q8NIP4 Yarrowia lipolytica gag-like protein
YALI1_D02895t	Compare to YALI0D02431g, Full length Line element,uniprot|Q8NIP3 Yarrowia lipolytica reverse transcriptase
YALI1_D02936g	Compare to YALI0D02453g, similar to AN8752 2 Aspergillus nidulans predicted protein
YALI1_D02990g	Compare to YALI0D02475g, weakly similar to CA4820|IPF1196 Candida albicans unknown function Hypothetical Zn(2)-Cys(6) zinc-finger protein
YALI1_D03047g	Compare to YALI0D02497g, similar to uniprot|P00927 Saccharomyces cerevisiae YER086w ILV1 anabolic serine and threonine dehydratase precursor
YALI1_D03061g	Compare to YALI0D02519g, similar to Saccharomyces cerevisiae YMR130W; ancestral locus Anc_2.404, weakly similar to uniprot|Q04223 Saccharomyces cerevisiae YMR130w
YALI1_D03091g	Compare to YALI0D02563g, similar to uniprot|P36091 Saccharomyces cerevisiae YKL046c
YALI1_D03144g	Compare to YALI0D02585g, weakly similar to uniprot|P54072 Saccharomyces cerevisiae YLR152c
YALI1_D03167g	Compare to YALI0D02607g, similar to uniprot|P38766 Saccharomyces cerevisiae YHR031c RRM3 DNA helicase involved in rDNA replication and Ty1 transposition
YALI1_D03221g	Truncated form of YALI0D02629g, similar to uniprot|Q03028 Saccharomyces cerevisiae YPL134c Mitochondrial 2-oxodicarboxylate carrier 1 ODC1
YALI1_D03245g	Compare to YALI0D02651g, weakly similar to uniprot|Q9HED1 Neurospora crassa Related to sucrose cleavage protein
YALI1_D03278g	Compare to YALI0D02673g, similar to Saccharomyces cerevisiae PTR3 (YFR029W); ancestral locus Anc_1.348, weakly similar to uniprot|P43606 Saccharomyces cerevisiae YFR029w PTR3 regulator of expression of the PTR2 GAP1 and BAP2 genes
YALI1_D03329g	Compare to YALI0D02695g, no similarity
YALI1_D03380g	Truncated form of YALI0D02717g, weakly similar to uniprot|Q9UTT2 Schizosaccharomyces pombe splicing factor PRP12P/SAP130, similar to Saccharomyces cerevisiae RSE1 (YML049C); ancestral locus Anc_1.497
YALI1_D03412g	Compare to YALI0D02739g, similar to Saccharomyces cerevisiae GSF2 (YML048W); ancestral locus Anc_1.496, weakly similar to uniprot|Q04697 Saccharomyces cerevisiae YML048w EFF2 involved in glucose repression
YALI1_D03488g	Compare to YALI0D02761g, weakly similar to wi|NCU05726.1 Neurospora crassa NCU05726.1 hypothetical protein
YALI1_D03561g	Compare to YALI0D02783g, weakly similar to uniprot|P21657 Saccharomyces cerevisiae YIR023w DAL81 transcriptional activator for allantoin and GABA catabolic genes, similar to Saccharomyces cerevisiae DAL81 (YIR023W); ancestral locus Anc_2.651
YALI1_D03575g	Compare to YALI0D02805g, highly similar to uniprot|P33204 Saccharomyces cerevisiae YKL013c ARC19 subunit of the ARP2/3 complex, similar to Saccharomyces cerevisiae ARC19 (YKL013C); ancestral locus Anc_2.650
YALI1_D03604g	Compare to YALI0D02827g, weakly similar to uniprot|P33203 Saccharomyces cerevisiae YKL012w PRP40 splicing factor, similar to Saccharomyces cerevisiae PRP40 (YKL012W); ancestral locus Anc_2.649
YALI1_D03647g	Compare to YALI0D02849g, similar to Saccharomyces cerevisiae SEC11 (YIR022W); ancestral locus Anc_2.648, similar to uniprot|P15367 Saccharomyces cerevisiae YIR022w SEC11 signal sequence processing protein
YALI1_D03663g	Compare to YALI0D02871g, similar to uniprot|P43593 Saccharomyces cerevisiae YFR010w UBP6 ubiquitin-specific protease, similar to Saccharomyces cerevisiae UBP6 (YFR010W); ancestral locus Anc_1.369
YALI1_D03701g	Compare to YALI0D02893g, similar to Saccharomyces cerevisiae YFR011C; ancestral locus Anc_1.370, similar to uniprot|P43594 Saccharomyces cerevisiae YFR011c ochre suppressor tyr-tRNA
YALI1_D03718g	Compare to YALI0D02915g, no similarity
YALI1_D03756g	Compare to YALI0D02937g, similar to uniprot|O94657 Schizosaccharomyces pombe Dnaj related protein
YALI1_D03766g	Compare to YALI0D02959g, similar to uniprot|P18409 Saccharomyces cerevisiae YAL010c MDM10 involved in mitochondrial morphology and inheritance, similar to Saccharomyces cerevisiae MDM10 (YAL010C); ancestral locus Anc_7.103
YALI1_D03805g	Compare to YALI0D02981g, highly similar to uniprot|P09230 Yarrowia lipolytica Alkaline extracellular protease precursor XPR2 gene
YALI1_D03831g	Compare to YALI0D02995g, similar to uniprot|Q02804 Saccharomyces cerevisiae YPL051w ARL3 ADP-ribosylation factor-like protein member of the arf-sar family in the ras superfamily
YALI1_D03865g	Compare to YALI0D03069g, similar to uniprot|P04161 Saccharomyces cerevisiae YDR408c ADE8 phosphoribosylglycinamide formyltransferase (GART), similar to Saccharomyces cerevisiae ADE8 (YDR408C); ancestral locus Anc_5.508
YALI1_D03888g	Compare to YALI0D03091g, similar to Saccharomyces cerevisiae SPO7 (YAL009W); ancestral locus Anc_7.104, weakly similar to uniprot|P18410 Saccharomyces cerevisiae YAL009w SPO7 meiotic protein
YALI1_D03904g	Compare to YALI0D03113g, similar to Saccharomyces cerevisiae COG4 (YPR105C); ancestral locus Anc_3.419, weakly similar to uniprot|Q06096 Saccharomyces cerevisiae YPR105c
YALI1_D03952g	Truncated form of YALI0D03135g, similar to Saccharomyces cerevisiae ILV5 (YLR355C); ancestral locus Anc_4.190, highly similar to uniprot|P06168 Saccharomyces cerevisiae YLR355c ILV5 ketol-acid reducto-isomerase
YALI1_D03990g	Compare to YALI0D03157g, highly similar to uniprot|P87027 Schizosaccharomyces pombe Septum-promoting GTP-binding protein 1 (GTPase spg1)
YALI1_D04055g	Truncated form of YALI0D03179g, similar to uniprot|Q9C164 Aspergillus oryzae Chitin synthase
YALI1_D04128g	Compare to YALI0D03245g, highly similar to uniprot|Q6C2W4 Yarrowia lipolytica YALI0F04598g
YALI1_D04186g	Compare to YALI0D03267g, similar to uniprot|P21269 Saccharomyces cerevisiae YER168c CCA1 tRNA nucleotidyltransferase, similar to Saccharomyces cerevisiae CCA1 (YER168C); ancestral locus Anc_8.233
YALI1_D04204g	Compare to YALI0D03311g, no similarity
YALI1_D04261g	Compare to YALI0D03333g, similar to uniprot|P21672 Saccharomyces cerevisiae YIL066c RNR3 ribonucleotide reductase repair inducible large subunit
YALI1_D04277g	Compare to YALI0D03355g, weakly similar to DEHA0E15807g Debaryomyces hansenii
YALI1_D04331g	Compare to YALI0D03399g, similar to uniprot|Q91YE4 Mus musculus 67 kDa polymerase- associated factor PAF67
YALI1_D04370g	Compare to YALI0D03465g, uniprot|P30887 Yarrowia lipolytica Acid phosphatase precursor PHO2 gene
YALI1_D04432g	Compare to YALI0D03480g, weakly similar to uniprot|Q872A4 Neurospora crassa CAD70830 (CAD70830) Related to phosphatidylserine decarboxylase, similar to Saccharomyces cerevisiae PSD2 (YGR170W); ancestral locus Anc_5.174
YALI1_D04467g	Compare to YALI0D03509g, similar to Saccharomyces cerevisiae BCS1 (YDR375C); ancestral locus Anc_5.448, similar to uniprot|P32839 Saccharomyces cerevisiae YDR375c BCS1 mitochondrial protein of the CDC48/PAS1/SEC18 (AAA) family of ATPases
YALI1_D04469g	Compare to YALI0D03531g, similar to Saccharomyces cerevisiae UBP2 (YOR124C); ancestral locus Anc_5.443, similar to uniprot|Q01476 Saccharomyces cerevisiae YOR124c UBP2 ubiquitin-specific proteinase
YALI1_D04533g	Compare to YALI0D03575g, similar to uniprot|O14205 Schizosaccharomyces pombe Hypothetical protein C5D6.13 in chromosome I, similar to Saccharomyces cerevisiae VPS74 (YDR372C); ancestral locus Anc_5.442
YALI1_D04556g	Compare to YALI0D03597g, weakly similar to uniprot|Q9C2R0 Neurospora crassa Hypothetical 34.4 kDa protein
YALI1_D04566g	Compare to YALI0D03619g, similar to Saccharomyces cerevisiae MSM1 (YGR171C); ancestral locus Anc_5.176, similar to uniprot|P22438 Saccharomyces cerevisiae YGR171c MSM1 methionyl-tRNA synthetase
YALI1_D04594g	Compare to YALI0D03641g, no similarity
YALI1_D04636g	Compare to YALI0D03663g, similar to Saccharomyces cerevisiae SWC3 (YAL011W); ancestral locus Anc_7.102, no similarity
YALI1_D04653g	Compare to YALI0D03696g, no similarity
YALI1_D04680g	Truncated form of YALI0D03718g, similar to Saccharomyces cerevisiae RPB2 (YOR151C); ancestral locus Anc_5.497, highly similar to uniprot|P08518 Saccharomyces cerevisiae YOR151c RPB2 DNA-directed RNA polymerase II 140 kDa chain
YALI1_D04725g	Compare to YALI0D03740g, weakly similar to uniprot|Q6C506 Yarrowia lipolytica YALI0E22088g
YALI1_D04772g	Compare to YALI0D03762g, similar to uniprot|P38886 Saccharomyces cerevisiae YHR200w SUN1 26S proteasome regulatory subunit, similar to Saccharomyces cerevisiae RPN10 (YHR200W); ancestral locus Anc_4.372
YALI1_D04789g	Compare to YALI0D03784g, no similarity
YALI1_D04814g	Compare to YALI0D03888g, some similarities with uniprot|P38110 Saccharomyces cerevisiae YBL088c TEL1 telomere length control protein
YALI1_D04901g	Compare to YALI0D03916g, similar to uniprot|P40496 Saccharomyces cerevisiae YIL093c RSM25, similar to Saccharomyces cerevisiae RSM25 (YIL093C); ancestral locus Anc_2.290
YALI1_D04910g	Compare to YALI0D03938g, no similarity
YALI1_D04936g	Compare to YALI0D03949g, highly similar to uniprot|Q8WZU1 Neurospora crassa Hypothetical protein B8J24.130, similar to Saccharomyces cerevisiae YNL024C-A; ancestral locus Anc_2.291
YALI1_D04969g	Compare to YALI0D03960g, similar to uniprot|O74974 Schizosaccharomyces pombe Hypothetical 75.7 kDa protein, similar to Saccharomyces cerevisiae YIL091C; ancestral locus Anc_2.292
YALI1_D04978g	Compare to YALI0D03982g, similar to CA2206|IPF12173 Candida albicans IPF12173 unknown function, similar to Saccharomyces cerevisiae ICE2 (YIL090W); ancestral locus Anc_2.293
YALI1_D05019g	Compare to YALI0D04004g, similar to Saccharomyces cerevisiae SSN8 (YNL025C); ancestral locus Anc_2.294, similar to uniprot|P47821 Saccharomyces cerevisiae YNL025C RNA polymerase II holoenzyme cyclin-like subunit SSN8
YALI1_D05038g	Compare to YALI0D04026g, uniprot|Q874C3 Yarrowia lipolytica Longevity- assurance protein
YALI1_D05070g	Compare to YALI0D04048g, similar to uniprot|P40073 Saccharomyces cerevisiae YER118c SSU81 involved in the HOG1 high-osmolarity signal transduction pathway, similar to Saccharomyces cerevisiae SHO1 (YER118C); ancestral locus Anc_7.419
YALI1_D05099g	Compare to YALI0D04070g, no similarity
YALI1_D05111g	Compare to YALI0D04092g, similar to uniprot|P14065 Saccharomyces cerevisiae YOR120w GCY1 galactose-induced protein of aldo/keto reductase family
YALI1_D05139g	Compare to YALI0D04114g, weakly similar to uniprot|Q8X0V5 Neurospora crassa Related to putative dual specificity protein kinase pom1
YALI1_D05195g	Compare to YALI0D04136g, no similarity
YALI1_D05222g	Compare to YALI0D04158g, weakly similar to uniprot|P12887 Saccharomyces cerevisiae YML021c UNG1 uracil-DNA glycosylase, similar to Saccharomyces cerevisiae UNG1 (YML021C); ancestral locus Anc_5.555
YALI1_D05244g	Compare to YALI0D04180g, weakly similar to uniprot|O74959 Schizosaccharomyces pombe Hypothetical short chain dehydrogenase
YALI1_D05270g	Compare to YALI0D04202g, similar to Saccharomyces cerevisiae GPI10 (YGL142C); ancestral locus Anc_2.334, similar to uniprot|P30777 Saccharomyces cerevisiae YGL142c GPI10 required for Glycosyl Phosphatdyl Inositol synthesis
YALI1_D05286g	Compare to YALI0D04224g, no similarity
YALI1_D05320g	Compare to YALI0D04246g, similar to Saccharomyces cerevisiae PXA2 (YKL188C); ancestral locus Anc_4.287, similar to uniprot|P34230 Saccharomyces cerevisiae YKL188c PXA2 ABC transporter peroxisomal
YALI1_D05343g	Compare to YALI0D04268g, similar to uniprot|P00431 Saccharomyces cerevisiae YKR066c CCP1 cytochrome-c peroxidase precursor
YALI1_D05370g	Compare to YALI0D04290g, similar to Saccharomyces cerevisiae MSS2 (YDL107W); ancestral locus Anc_2.333, weakly similar to uniprot|P40990 Saccharomyces cerevisiae YDL107w MSS2 ser/thr protein kinase
YALI1_D05375g	Compare to YALI0D04312g, similar to CA0218|IPF15294 Candida albicans IPF15294
YALI1_D05398g	Compare to YALI0D04334g, similar to uniprot|P06242 Saccharomyces cerevisiae YDL108w KIN28 cyclin-dependent ser/thr protein kinase
YALI1_D05414g	Compare to YALI0D04356g, similar to ca|CA3692|IPF4876 Candida albicans unknown function
YALI1_D05440g	Compare to YALI0D04378g, similar to Saccharomyces cerevisiae YDR287W; ancestral locus Anc_5.294, similar to uniprot|Q05533 Saccharomyces cerevisiae YDR287w
YALI1_D05450g	Compare to YALI0D04400g, no similarity
YALI1_D05474g	Compare to YALI0D04422g, similar to Saccharomyces cerevisiae NCP1 (YHR042W); ancestral locus Anc_5.292, uniprot|Q6L8F1 Yarrowia lipolytica YALI0D04422g YlCPR1 NADPH-cytochrome P450 reductase
YALI1_D05538g	Compare to YALI0D04444g, similar to uniprot|P52918 Saccharomyces cerevisiae YDR335w MSN5 multicopy supressor of SNF1 mutation, similar to Saccharomyces cerevisiae MSN5 (YDR335W); ancestral locus Anc_5.386
YALI1_D05594g	Compare to YALI0D04466g, weakly similar to uniprot|Q9Y8B4 Emericella nidulans Positive sulphur transcription regulator METR
YALI1_D05633g	Compare to YALI0D04488g, uniprot|P45816 Yarrowia lipolytica SEC14 cytosolic factor (Phosphatidylinositol / phosphatidylcholine transfer protein) (PI/PC TP), similar to Saccharomyces cerevisiae YKL091C and SEC14 (YMR079W); ancestral locus Anc_2.491
YALI1_D05692g	Compare to YALI0D04510g, no similarity
YALI1_D05705g	Compare to YALI0D04554g, weakly similar to uniprot|Q10478 Schizosaccharomyces pombe Hypothetical protein C17C9.06
YALI1_D05736g	Truncated form of YALI0D04576g, no similarity
YALI1_D05764g	Converted to coding from non-coding YALI0D04598g, no similarity frameshifted
YALI1_D05817g	Compare to YALI0D04697g, similar to Saccharomyces cerevisiae MTG2 (YHR168W); ancestral locus Anc_5.70, similar to uniprot|P38860 Saccharomyces cerevisiae YHR168w probable GTP-binding protein
YALI1_D05822g	Compare to YALI0D04719g, weakly similar to uniprot|Q12386 Saccharomyces cerevisiae YOR141c ARP8 Actin-related protein, similar to Saccharomyces cerevisiae ARP8 (YOR141C); ancestral locus Anc_5.477
YALI1_D05873g	Compare to YALI0D04741g, highly similar to uniprot|Q9P567 Neurospora crassa Probable succinyl-CoA ligase (GDP-forming) beta-chain mitochondrial precursor, similar to Saccharomyces cerevisiae LSC2 (YGR244C); ancestral locus Anc_5.82
YALI1_D05901g	Compare to YALI0D04763g, no similarity
YALI1_D05956g	Compare to YALI0D04785g, some similarities with uniprot|P20134 Saccharomyces cerevisiae YOR140w SFL1 heat shock transcription factor, similar to Saccharomyces cerevisiae MGA1 (YGR249W); ancestral locus Anc_5.77
YALI1_D06043g	Compare to YALI0D04807g, similar to uniprot|O60070 Schizosaccharomyces pombe Ash2- trithorax family protein, similar to Saccharomyces cerevisiae BRE2 (YLR015W); ancestral locus Anc_5.236
YALI1_D06061g	Compare to YALI0D04829g, similar to Saccharomyces cerevisiae YIP1 (YGR172C); ancestral locus Anc_5.177, similar to uniprot|P53039 Saccharomyces cerevisiae YGR172c YIP1 Golgi membrane protein
YALI1_D06131g	Compare to YALI0D04851g, similar to uniprot|Q08193 Saccharomyces cerevisiae YOL030w strongly similar to glycoprotein Gas1P
YALI1_D06195g	Compare to YALI0D04873g, similar to uniprot|P38929 Saccharomyces cerevisiae YGL006w PMC1 Ca2+-transporting P-type ATPase, similar to Saccharomyces cerevisiae PMC1 (YGL006W); ancestral locus Anc_4.117
YALI1_D06233g	Compare to YALI0D04884g, gnl|GLV|YALI0D04884g [Yarrowia lipolytica] weakly similar to uniprot|Q9P5L7 Neurospora crassa B23L21.120 hypothetical protein
YALI1_D06251g	Compare to YALI0D04895g, similar to Saccharomyces cerevisiae SEC72 (YLR292C); ancestral locus Anc_6.89, weakly similar to uniprot|P39742 Saccharomyces cerevisiae YLR292c SEC72 ER protein-translocation complex subunit
YALI1_D06276g	Compare to YALI0D04917g, weakly similar to uniprot|Q00539 Saccharomyces cerevisiae YHR086w NAM8 meiotic recombination protein
YALI1_D06302g	Compare to YALI0D04939g, similar to ASHI Bos taurus accessory protein of NADH-ubiquinone reductase (complex I)
YALI1_D06311g	Compare to YALI0D04961g, similar to uniprot|Q05471 Saccharomyces cerevisiae YDR334w SWR1 DEAH-box protein putative RNA helicase
YALI1_D06380g	Compare to YALI0D04983g, similar to uniprot|P38626 Saccharomyces cerevisiae YIL043c CBR1 cytochrome-b5 reductase
YALI1_D06408g	Truncated form of YALI0D05005g, similar to uniprot|P34228 Saccharomyces cerevisiae YBL066c SEF1 putative transcription factor
YALI1_D06489g	Compare to YALI0D05041g, some similarities with DEHA0A12749g Debaryomyces hansenii IPF 7296.1 probable Zn finger transcription factor
YALI1_D06572g	Truncated form of YALI0D05049g, weakly similar to uniprot|O42998 Schizosaccharomyces pombe Hypothetical 217.7 kDa protein, similar to Saccharomyces cerevisiae LAA1 (YJL207C); ancestral locus Anc_1.127
YALI1_D06638g	Compare to YALI0D05071g, similar to Saccharomyces cerevisiae NUC1 (YJL208C); ancestral locus Anc_1.126, similar to uniprot|P08466 Saccharomyces cerevisiae YJL208c NUC1 mitochondrial nuclease
YALI1_D06665g	Compare to YALI0D05093g, similar to Saccharomyces cerevisiae POL31 (YJR006W); ancestral locus Anc_5.175, similar to uniprot|P46957 Saccharomyces cerevisiae YJR006w HUS2 DNA-directed DNA polymerase delta 55 KD subunit
YALI1_D06682g	Compare to YALI0D05137g, weakly similar to uniprot|Q3E776 Saccharomyces cerevisiae YBR255C-A, similar to Saccharomyces cerevisiae YBR255C-A; ancestral locus Anc_7.178
YALI1_D06700g	Compare to YALI0D05159g, similar to uniprot|P38174 Saccharomyces cerevisiae YBL091c MAP2 methionine aminopeptidase isoform 2, similar to Saccharomyces cerevisiae MAP2 (YBL091C); ancestral locus Anc_7.422
YALI1_D06736g	Compare to YALI0D05181g, some similarities with uniprot|P40075 Saccharomyces cerevisiae YER120w SCS2 required for inositol metabolism, similar to Saccharomyces cerevisiae SCS22 (YBL091C-A) and SCS2 (YER120W); ancestral locus Anc_7.423
YALI1_D06756g	Compare to YALI0D05203g, no similarity
YALI1_D06788g	Compare to YALI0D05247g, no similarity
YALI1_D06805g	Compare to YALI0D05269g, no similarity
YALI1_D06828g	Compare to YALI0D05291g, some similarities with uniprot|P40075 Saccharomyces cerevisiae YER120w SCS2 required for inositol metabolism
YALI1_D06859g	Compare to YALI0D05313g, similar to uniprot|Q871I8 Neurospora crassa CAD71014 Hypothetical protein 20H10.310
YALI1_D06883g	Compare to YALI0D05335g, similar to uniprot|Q96V00 Cryptococcus neoformans UDP- glucuronic acid decarboxylase Uxs1p
YALI1_D06904g	Compare to YALI0D05357g, similar to Saccharomyces cerevisiae YOR093C; ancestral locus Anc_2.191, similar to uniprot|Q9C3Z2 Cochliobolus heterostrophus Peptide synthetase-like protein
YALI1_D06988g	Truncated form of YALI0D05379g, similar to Saccharomyces cerevisiae AXL2 (YIL140W); ancestral locus Anc_2.208, similar to uniprot|P38928 Saccharomyces cerevisiae YIL140w SRO4 required for axial pattern of budding
YALI1_D07049g	Compare to YALI0D05401g, weakly similar to uniprot|P38724 Saccharomyces cerevisiae YHL047c TAF1 siderophore transporter for triacetylfusarinine C
YALI1_D07089g	Compare to YALI0D05467g, uniprot|Q9UUU3 Yarrowia lipolytica NUAM protein precursor
YALI1_D07118g	Compare to YALI0D05489g, similar to uniprot|P38793 Saccharomyces cerevisiae YHR070w tRNA modification enyzyme, similar to Saccharomyces cerevisiae TRM5 (YHR070W); ancestral locus Anc_5.346
YALI1_D07124g	Compare to YALI0D05511g, similar to Saccharomyces cerevisiae RRP4 (YHR069C); ancestral locus Anc_5.345, similar to uniprot|P38792 Saccharomyces cerevisiae YHR069c RRP4 3 -5 exoribonuclease required for 3 end formation of 5.8S rRNA (Exosome complex)
YALI1_D07149g	Compare to YALI0D05533g, similar to Saccharomyces cerevisiae OMS1 (YDR316W); ancestral locus Anc_5.344, weakly similar to uniprot|Q06668 Saccharomyces cerevisiae YDR316w similar to hypothetical ubiquitin system protein S. pombe ubiquinone/menaquinone biosynthesis possible methyltransferase
YALI1_D07162g	Compare to YALI0D05547g, similar to Saccharomyces cerevisiae NPL3 (YDR432W); ancestral locus Anc_5.542, weakly similar to uniprot|P78814 Schizosaccharomyces pombe Pre-mRNA splicing factor srp2
YALI1_D07182g	Compare to YALI0D05577g, similar to Saccharomyces cerevisiae CUS1 (YMR240C); ancestral locus Anc_8.780, similar to uniprot|Q9UUI3 Schizosaccharomyces pombe Putative human spliceosome associated protein 145 (SAP 145) homologue
YALI1_D07209g	Compare to YALI0D05599g, weakly similar to uniprot|Q9P3D1 Neurospora crassa Conserved hypothetical protein
YALI1_D07232g	Compare to YALI0D05621g, similar to uniprot|Q04895 Saccharomyces cerevisiae YIR028w DAL4 allantoin permease
YALI1_D07252g	Converted to coding from non-coding YALI0D05632g, some similarities with uniprot|P54115 Saccharomyces cerevisiae YPL061w ALD6 aldehydedehydrogenase gene relics no start
YALI1_D07271g	Compare to YALI0D05665g, similar to uniprot|P40157 Saccharomyces cerevisiae YNL212w VID27, similar to Saccharomyces cerevisiae VID27 (YNL212W); ancestral locus Anc_2.35
YALI1_D07299g	Compare to YALI0D05676g, similar to Saccharomyces cerevisiae YNL211C; ancestral locus Anc_2.36,gnl|GLV|YALI0D05676g [Yarrowia lipolytica] similar to uniprot|P53869 Saccharomyces cerevisiae YNL211c Hypothetical 10.6 kDa protein in PEX17-MER1 intergenic region
YALI1_D07315g	Compare to YALI0D05687g, similar to uniprot|Q87R47 Vibrio parahaemolyticus Methylated-DNA-protein-cysteine methyltransferase-related protein
YALI1_D07348g	Compare to YALI0D05731g, highly similar to uniprot|P0C0W1 Saccharomyces cerevisiae YJL190c RPS22A and highly similar to uniprot|Q3E7Y3 Saccharomyces cerevisiae YLR367W RPS22B Ribosomal Protein of the Small subunit, similar to Saccharomyces cerevisiae RPS22A (YJL190C); ancestral locus Anc_1.147
YALI1_D07379g	Compare to YALI0D05753g, similar to Saccharomyces cerevisiae RPS14A (YCR031C) and RPS14B (YJL191W); ancestral locus Anc_1.146, highly similar to wi|NCU07830.1 Neurospora crassa NCU07830.1 40S ribosomal protein S14 (CRP2)
YALI1_D07427g	Compare to YALI0D05775g, similar to uniprot|Q08773 Saccharomyces cerevisiae YOR304w ISW2 strong similarity to Drosophila ISW1 and human SNF2P homolog
YALI1_D07451g	Compare to YALI0D05797g, similar to Saccharomyces cerevisiae APT2 (YDR441C) and APT1 (YML022W); ancestral locus Anc_5.557, similar to uniprot|P49435 Saccharomyces cerevisiae YML022w APT1 adenine phosphoribosyltransferase
YALI1_D07486g	Compare to YALI0D05819g, similar to uniprot|P15365 Saccharomyces cerevisiae YJR152w DAL5 allantoate permease
YALI1_D07525g	Compare to YALI0D05841g, weakly similar to uniprot|P40310 Saccharomyces cerevisiae YJL093c TOK1 outward-rectifier potassium channel, similar to Saccharomyces cerevisiae TOK1 (YJL093C); ancestral locus Anc_1.273
YALI1_D07549g	Compare to YALI0D05863g, weakly similar to uniprot|Q826P0 Streptomyces avermitilis SAV7142 Hypothetical protein
YALI1_D07576g	Compare to YALI0D05929g, similar to uniprot|P38004 Chlamydia trachomatis 3- oxoacyl-[acyl-carrier protein] reductase
YALI1_D07590t	Compare to YALI0D26433g:2, Full length Line element, uniprot|Q8NIP4 Yarrowia lipolytica gag-like protein
YALI1_D07612t	Compare to YALI0D26444g, Full length Line element,uniprot|Q8NIP3 Yarrowia lipolytica Reverse transcriptase
YALI1_D07665g	Compare to YALI0D05995g, similar to Saccharomyces cerevisiae SAC1 (YKL212W); ancestral locus Anc_1.533, similar to uniprot|P32368 Saccharomyces cerevisiae YKL212w SAC1 Recessive suppressor of secretory defect
YALI1_D07696g	Compare to YALI0D06017g, similar to uniprot|P40350 Saccharomyces cerevisiae YPL227c ALG5 Dolichyl-phosphate beta-glucosyltransferase, similar to Saccharomyces cerevisiae ALG5 (YPL227C); ancestral locus Anc_6.253
YALI1_D07729g	Compare to YALI0D06039g, similar to uniprot|P22146 Saccharomyces cerevisiae YMR307w GAS1 glycophospholipid-anchored surface glycoprotein
YALI1_D07775g	Compare to YALI0D06061g, similar to uniprot|P53878 Saccharomyces cerevisiae YNL181w similarity to hypothetical S. pombe protein
YALI1_D07788g	Compare to YALI0D06083g, no similarity
YALI1_D07831g	Compare to YALI0D06149g, similar to uniprot|P47032 Saccharomyces cerevisiae YJL079c PRY1 protein precursor (Pathogen related in Sc 1)
YALI1_D07888g	Compare to YALI0D06171g, no similarity
YALI1_D07945g	Compare to YALI0D06193g, weakly similar to KLLA-IPF1932.1 Kluyveromyces lactis KLLA0F00572g
YALI1_D07981g	Compare to YALI0D06215g, similar to Saccharomyces cerevisiae EHD3 (YDR036C); ancestral locus Anc_3.271, similar to uniprot|Q9C251 Neurospora crassa Related to enoyl-CoA-hydratase
YALI1_D08000g	Compare to YALI0D06237g, similar to uniprot|O59715 Schizosaccharomyces pombe Putative fatty acid desaturase
YALI1_D08031g	Compare to YALI0D06259g, similar to uniprot|P52488 Saccharomyces cerevisiae YDR390c UBA2 E1-like (ubiquitin-activating) enzyme
YALI1_D08050g	Compare to YALI0D06281g, similar to Saccharomyces cerevisiae DPM1 (YPR183W); ancestral locus Anc_7.540, highly similar to uniprot|Q9HGE2 Trichoderma reesei Mannose phospho-dolichol synthase
YALI1_D08082g	Compare to YALI0D06303g, highly similar to uniprot|P28241 Saccharomyces cerevisiae YOR136w IDH2 isocitrate dehydrogenase
YALI1_D08125g	Compare to YALI0D06325g, similar to uniprot|P52893 Saccharomyces cerevisiae YLR089C Putative alanine aminotransferase mitochondrial precursor, similar to Saccharomyces cerevisiae YDR111C and YLR089C; ancestral locus Anc_8.263
YALI1_D08151g	Compare to YALI0D06347g, similar to uniprot|Q12042 Saccharomyces cerevisiae YPL162C P2558 protein, similar to Saccharomyces cerevisiae YPL162C; ancestral locus Anc_8.686
YALI1_D08174g	Compare to YALI0D06369g, no similarity
YALI1_D08186g	Compare to YALI0D06391g, no similarity
YALI1_D08205g	Compare to YALI0D06413g, similar to uniprot|Q12271 Saccharomyces cerevisiae YOR3231W YOR109w INP53 phosphatidylinositol phosphate phosphatase
YALI1_D08251g	Compare to YALI0D06435g, weakly similar to uniprot|Q96U24 Neurospora crassa Conserved hypothetical protein, similar to Saccharomyces cerevisiae YOL087C; ancestral locus Anc_3.115
YALI1_D08285g	Compare to YALI0D06457g, similar to Saccharomyces cerevisiae RPB5 (YBR154C); ancestral locus Anc_3.114, highly similar to uniprot|Q9P4B9 Kluyveromyces marxianus DNA-directed RNA polymerases II 24 kDa polypeptide
YALI1_D08317g	Compare to YALI0D06479g, no similarity
YALI1_D08339g	Compare to YALI0D06501g, similar to uniprot|P33312 Saccharomyces cerevisiae Saccharomyces cerevisiae YBR153w RIB7 5-amino-6-(5- phosphoribosylamino)uracil reductase, similar to Saccharomyces cerevisiae RIB7 (YBR153W); ancestral locus Anc_3.113
YALI1_D08360g	Compare to YALI0D06523g, similar to Saccharomyces cerevisiae PRE7 (YBL041W); ancestral locus Anc_7.480, highly similar to uniprot|P23724 Saccharomyces cerevisiae YBL041w PRE7 20S proteasome subunit(beta6)
YALI1_D08382g	Compare to YALI0D06545g, similar to uniprot|P18414 Saccharomyces cerevisiae YBL040c ERD2 ER lumen protein-retaining HDEL receptor, similar to Saccharomyces cerevisiae ERD2 (YBL040C); ancestral locus Anc_7.479
YALI1_D08402g	Compare to YALI0D06567g, similar to uniprot|Q8X0K0 Neurospora crassa Related to microfibril-associated protein
YALI1_D08408g	Compare to YALI0D06578g, similar to Saccharomyces cerevisiae GIM4 (YEL003W); ancestral locus Anc_7.139,gnl|GLV|YALI0D06578g [Yarrowia lipolytica] similar to uniprot|P40005 Saccharomyces cerevisiae YEL003w GIM4 tubulin folding prefoldin subunit 2
YALI1_D08429g	Compare to YALI0D06589g, similar to uniprot|P33767 Saccharomyces cerevisiae YEL002c WBP1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase beta subunit precursor, similar to Saccharomyces cerevisiae WBP1 (YEL002C); ancestral locus Anc_7.140
YALI1_D08440g	Compare to YALI0D06611g, no similarity, similar to Saccharomyces cerevisiae YIL002W-A; ancestral locus Anc_7.141
YALI1_D08460g	Compare to YALI0D06633g, no similarity
YALI1_D08494g	Compare to YALI0D06655g, no similarity
YALI1_D08564g	Compare to YALI0D06688g, similar to uniprot|P40088 Saccharomyces cerevisiae YER145c FTR1 iron permease that mediates high-affinity iron uptake
YALI1_D08621g	Compare to YALI0D06710g, similar to Saccharomyces cerevisiae SSP2 (YOR242C); ancestral locus Anc_8.670, weakly similar to uniprot|Q08646 Saccharomyces cerevisiae YOR242c SSP2 probable ABC transport permease
YALI1_D08648g	Compare to YALI0D06732g, no similarity
YALI1_D08684g	Compare to YALI0D06754g, similar to uniprot|Q9P861 Arxula adeninivorans Ferro-O2- oxidoreductase precursor
YALI1_D08715g	Compare to YALI0D06776g, similar to Saccharomyces cerevisiae SKI6 (YGR195W); ancestral locus Anc_5.146, similar to uniprot|P46948 Saccharomyces cerevisiae YGR195w SKI6 3 -5 exoribonuclease required for 3 end formation of 5.8S
YALI1_D08734g	Compare to YALI0D06798g, similar to uniprot|Q12375 Saccharomyces cerevisiae YOR130c ARG11 ornithine transport protein of mitochondria involved in arginine metabolism member of the mitochondrial carrier family (MCF)
YALI1_D08749g	Compare to YALI0D06820g, some similarities with uniprot|P32337 Saccharomyces cerevisiae YMR308c PSE1 beta karyopherin
YALI1_D08783g	Compare to YALI0D06842g, similar to uniprot|P47089 Saccharomyces cerevisiae YJR014w Density-regulated protein homolog, similar to Saccharomyces cerevisiae TMA22 (YJR014W); ancestral locus Anc_5.144
YALI1_D08798g	Compare to YALI0D06864g, weakly similar to uniprot|Q03516 Saccharomyces cerevisiae YMR266w conserved protein, similar to Saccharomyces cerevisiae SPO75 (YLL005C); ancestral locus Anc_5.211
YALI1_D08843g	Compare to YALI0D06886g, similar to Saccharomyces cerevisiae MMM1 (YLL006W); ancestral locus Anc_5.210, some similarities with uniprot|P41800 Saccharomyces cerevisiae YLL006w MMM1 required for mitochondrial shape and structure
YALI1_D08850g	Compare to YALI0D06908g, similar to uniprot|P53299 Saccharomyces cerevisiae YGR181W TIM13 Mitochondrial intermembrane space protein, forms a complex with TIm8p that mediates import and insertion of a subset of polytopic inner membrane proteins, similar to Saccharomyces cerevisiae TIM13 (YGR181W); ancestral locus Anc_5.188
YALI1_D08884g	Compare to YALI0D06930g, similar to uniprot|Q06408 Saccharomyces cerevisiae YDR380W ARO10 phenylpyruvate decarboxylase, catalyzes decarboxylation of phenylpyruvate to phenylacetaldehyde
YALI1_D08910g	Compare to YALI0D06952g, weakly similar to DEHA0G06963g Debaryomyces hansenii IPF 4466.1 and KLLA0E19701g Kluyveromyces lactis IPF 2215.1
YALI1_D08946g	Compare to YALI0D06974g, similar to Saccharomyces cerevisiae GLO2 (YDR272W) and GLO4 (YOR040W); ancestral locus Anc_5.637, similar to uniprot|Q05584 Saccharomyces cerevisiae YDR272w GLO2 glyoxalase II (hydroxyacylglutathione hydrolase)
YALI1_D08971g	Compare to YALI0D06996g, no similarity
YALI1_D09000g	Compare to YALI0D07018g, similar to uniprot|Q12000 Saccharomyces cerevisiae YOR091w, similar to Saccharomyces cerevisiae TMA46 (YOR091W); ancestral locus Anc_2.194
YALI1_D09004g	Compare to YALI0D07040g, similar to Saccharomyces cerevisiae PTC5 (YOR090C); ancestral locus Anc_2.195, weakly similar to uniprot|Q12511 Saccharomyces cerevisiae YOR090c PTC5 putative 2C protein phosphatase (PP2Cs)
YALI1_D09034g	Compare to YALI0D07062g, similar to uniprot|P53111 Saccharomyces cerevisiae YGL157w conserved protein
YALI1_D09055g	Compare to YALI0D07084g, similar to uniprot|Q03161 Saccharomyces cerevisiae YMR099c conserved protein, similar to Saccharomyces cerevisiae YMR099C; ancestral locus Anc_2.456
YALI1_D09068g	Compare to YALI0D07106g, weakly similar to uniprot|Q8VC10 Mus musculus Hypothetical 52.2 kDa protein
YALI1_D09103g	Compare to YALI0D07128g, similar to uniprot|P36017 Saccharomyces cerevisiae YOR089c VPS21 GTP-binding protein
YALI1_D09140g	Compare to YALI0D07150g, similar to Saccharomyces cerevisiae PRR1 (YKL116C); ancestral locus Anc_2.457, weakly similar to uniprot|Q9C2E8 Neurospora crassa Conserved hypothetical protein
YALI1_D09168g	Compare to YALI0D07194g, weakly similar to uniprot|P19263 Saccharomyces cerevisiae YLR071c RGR1 DNA-directed RNA polymerase II holoenzyme subunit, similar to Saccharomyces cerevisiae RGR1 (YLR071C); ancestral locus Anc_8.15
YALI1_D09203g	Compare to YALI0D07216g, similar to B22 Bos taurus accessory protein of NADH- ubiquinone reductase (complex I)
YALI1_D09215g	Compare to YALI0D07238g, similar to uniprot|Q9Y7J3 Schizosaccharomyces pombe Putative methyltransferase
YALI1_D09238g	Compare to YALI0D07260g, no similarity
YALI1_D09277g	Compare to YALI0D07282g, similar to Saccharomyces cerevisiae FET5 (YFL041W); ancestral locus Anc_8.17, similar to uniprot|Q9P861 Arxula adeninivorans Ferro-O2- oxidoreductase precursor
YALI1_D09308g	Compare to YALI0D07304g, similar to uniprot|P40088 Saccharomyces cerevisiae YER145c FTR1 iron permease that mediates high-affinity iron uptake
YALI1_D09356g	Compare to YALI0D07326g, highly similar to uniprot|P25039 Saccharomyces cerevisiae YLR069c MEF1 translation elongation factor G mitochondrial, similar to Saccharomyces cerevisiae MEF1 (YLR069C); ancestral locus Anc_8.18
YALI1_D09404g	Compare to YALI0D07348g, weakly similar to uniprot|P91125 Caenorhabditis elegans Hypothetical 35.8 kDa protein, similar to Saccharomyces cerevisiae PML1 (YLR016C); ancestral locus Anc_5.240
YALI1_D09420g	Compare to YALI0D07370g, similar to Saccharomyces cerevisiae CPA1 (YOR303W); ancestral locus Anc_8.776, similar to uniprot|P87183 Trichoderma virens Carbamoyl- phosphate synthase arginine-specific small chain mitochondrial precursor
YALI1_D09453g	Compare to YALI0D07392g, similar to uniprot|P53099 Saccharomyces cerevisiae YGL186c
YALI1_D09488g	Compare to YALI0D07414g, weakly similar to uniprot|P53965 Saccharomyces cerevisiae YNL032w SIW14
YALI1_D09504g	Compare to YALI0D07436g, similar to uniprot|P38431 Saccharomyces cerevisiae YPR041w TIF5 translation initiation factor eIF5, similar to Saccharomyces cerevisiae TIF5 (YPR041W); ancestral locus Anc_7.459
YALI1_D09534g	Compare to YALI0D07458g, no similarity
YALI1_D09566g	Compare to YALI0D07480g, similar to Saccharomyces cerevisiae SPS22 (YCL048W) and SPS2 (YDR522C); ancestral locus Anc_1.25, similar to uniprot|P38248 Saccharomyces Cerevisiae YBR078w ECM33 involved in cell wall
YALI1_D09623g	Compare to YALI0D07502g, similar to Saccharomyces cerevisiae SPS1 (YDR523C); ancestral locus Anc_1.24, weakly similar to uniprot|P08458 Saccharomyces cerevisiae YDR523c SPS1 ser/thr protein kinase
YALI1_D09667g	Compare to YALI0D07524g, similar to Saccharomyces cerevisiae AGE1 (YDR524C); ancestral locus Anc_1.23, weakly similar to uniprot|Q9UUE2 Schizosaccharomyces pombe Protein csx2 putative ADP- ribosylation factor (ARF) GTPase activating protein
YALI1_D09712g	Compare to YALI0D07535g, gnl|GLV|YALI0D07535g [Yarrowia lipolytica] similar to uniprot|P89113 Saccharomyces cerevisiae YOL052ca DDR2 heat shock protein DDRA2
YALI1_D09766g	Compare to YALI0D07546g, some similarities with uniprot|Q8PCT1 Xanthomonas campestris DNA repair system specific for alkylated DNA
YALI1_D09785g	Compare to YALI0D07568g, similar to Saccharomyces cerevisiae YIL087C; ancestral locus Anc_2.297, weakly similar to uniprot|P40502 Saccharomyces cerevisiae YIL087c
YALI1_D09790g	Compare to YALI0D07590g, similar to Saccharomyces cerevisiae TDP1 (YBR223C); ancestral locus Anc_6.121, similar to uniprot|Q9USG9 Schizosaccharomyces pombe Hypothetical 61.6 kDa protein
YALI1_D09831g	Compare to YALI0D07612g, similar to uniprot|P39969 Saccharomyces cerevisiae YER114c BOI2 budding protein, similar to Saccharomyces cerevisiae BOI1 (YBL085W) and BOI2 (YER114C); ancestral locus Anc_7.413
YALI1_D09870g	Compare to YALI0D07634g, similar to uniprot|P38715 Saccharomyces cerevisiae YHR104w GRE3 aldose reductase
YALI1_D09897g	Compare to YALI0D07656g, no similarity
YALI1_D09956g	Compare to YALI0D07678g, similar to Saccharomyces cerevisiae SNX41 (YDR425W); ancestral locus Anc_5.533, weakly similar to uniprot|Q07528 Saccharomyces cerevisiae Chromosome IV reading frame ORF YDL113C
YALI1_D09964g	Compare to YALI0D07700g, similar to Saccharomyces cerevisiae DYN2 (YDR424C); ancestral locus Anc_5.532, highly similar to uniprot|Q15701 Caenorhabditis elegans DNCL1 Dynein light chain protein 1 cytoplasmic
YALI1_D09996g	Compare to YALI0D07722g, ancestral locus Anc_5.531, similar to uniprot|Q86Z93 Gibberella moniliformis KLP7 Kinesin
YALI1_D10007g	Compare to YALI0D07744g, weakly similar to uniprot|Q9P5L6 Neurospora crassa Related to AP-1-like transcription factor
YALI1_D10022g	Compare to YALI0D07766g, weakly similar to uniprot|P53903 Saccharomyces cerevisiae YNL149c, similar to Saccharomyces cerevisiae PGA2 (YNL149C); ancestral locus Anc_2.121
YALI1_D10033g	Compare to YALI0D07788g, similar to Saccharomyces cerevisiae RPC31 (YNL151C); ancestral locus Anc_2.122, similar to uniprot|P17890 Saccharomyces cerevisiae YNL151c RPC31 DNA-directed RNA polymerase III 31 KD subunit
YALI1_D10067g	Compare to YALI0D07810g, weakly similar to uniprot|Q8J0A3 Cryptococcus neoformans Calcineurin temperature suppressor Cts1, similar to Saccharomyces cerevisiae YNL152W; ancestral locus Anc_2.124
YALI1_D10083g	Compare to YALI0D07832g, weakly similar to KLLA0B05995g Kluyveromyces lactis IPF 7487.1
YALI1_D10102g	Compare to YALI0D07854g, no similarity
YALI1_D10129g	Compare to YALI0D07876g, some similarities with uniprot|Q10355 Schizosaccharomyces pombe Hypothetical RNA-binding protein
YALI1_D10135g	Compare to YALI0D07890g, highly similar to uniprot|Q8X0I8 Neurospora crassa Probable E2 ubiquitin-conjugating enzyme
YALI1_D10160g	Compare to YALI0D07898g, no similarity
YALI1_D10192g	Compare to YALI0D07920g, weakly similar to uniprot|P43122 Saccharomyces cerevisiae YDL104c QRI7, similar to Saccharomyces cerevisiae QRI7 (YDL104C); ancestral locus Anc_2.343
YALI1_D10197g	Compare to YALI0D07942g, similar to uniprot|P47771 Saccharomyces cerevisiae YMR170c ALD5 aldehyde dehydrogenase 2 (NAD+)
YALI1_D10226g	Compare to YALI0D07964g, no similarity
YALI1_D10264g	Compare to YALI0D07986g, weakly similar to uniprot|Q9FUL6 Perilla frutescens Diacylglycerol acyltransferase
YALI1_D10304g	Compare to YALI0D08052g, similar to uniprot|P00729 Saccharomyces cerevisiae YMR297w PRC1 carboxypeptidase y serine-type protease
YALI1_D10316g	Compare to YALI0D08118g, no similarity
YALI1_D10367g	Compare to YALI0D08140g, similar to uniprot|P36110 Saccharomyces cerevisiae YKR013w PRY2 protein precursor (Pathogen related in Sc 2)
YALI1_D10424g	Compare to YALI0D08162g, highly similar to uniprot|P33723 Neurospora crassa GTP- binding protein ypt1
YALI1_D10458g	Compare to YALI0D08184g, highly similar to uniprot|P22202 Saccharomyces cerevisiae YER103w SSA4 heat shock protein of HSP70 family cytosolic
YALI1_D10495g	Compare to YALI0D08206g, similar to uniprot|Q08108 Saccharomyces cerevisiae YOL011w PLB3 phospholipase B (lysophospholipase)
YALI1_D10535g	Compare to YALI0D08228g, uniprot|Q9P8M1 Yarrowia lipolytica ADP/ATP carrier protein Aac1p
YALI1_D10565g	Compare to YALI0D08250g, similar to uniprot|Q871N8 Neurospora crassa NCU01449.1 hypothetical protein
YALI1_D10600g	Compare to YALI0D08272g, uniprot|Q9UVF3 Yarrowia lipolytica Actin
YALI1_D10623g	Compare to YALI0D08294g, similar to Saccharomyces cerevisiae NUP120 (YKL057C); ancestral locus Anc_2.582, weakly similar to uniprot|P35729 Saccharomyces cerevisiae YKL057c NUP120 nuclear pore protein
YALI1_D10668g	Compare to YALI0D08316g, ancestral locus Anc_3.507, weakly similar to uniprot|Q8FDQ2 Escherichia coli Hypothetical protein yrbH
YALI1_D10693g	Compare to YALI0D08338g, similar to uniprot|O59907 Neurospora crassa Annexin XIV
YALI1_D10721g	Compare to YALI0D08360g, weakly similar to uniprot|O13938 Schizosaccharomyces pombe Hypothetical protein
YALI1_D10768g	Compare to YALI0D08382g, similar to Saccharomyces cerevisiae GIT1 (YCR098C), similar to uniprot|P25346 Saccharomyces cerevisiae YCR098c GIT1 glycerophosphoinositol transporter
YALI1_D10812g	Compare to YALI0D08404g, similar to uniprot|Q871P1 Neurospora crassa CAD70955 Hypothetical protein B11C21.140
YALI1_D10829g	Compare to YALI0D08419g, similar to Saccharomyces cerevisiae PSY4 (YBL046W); ancestral locus Anc_7.485, weakly similar to uniprot|P38193 Saccharomyces cerevisiae YBL046w
YALI1_D10858g	Compare to YALI0D08448g, similar to Saccharomyces cerevisiae RSM24 (YDR175C); ancestral locus Anc_8.373, weakly similar to uniprot|Q03976 Saccharomyces cerevisiae YDR175c RSM24 component of the mitochondrial ribosomal small subunit
YALI1_D10865g	Compare to YALI0D08470g, weakly similar to uniprot|P47150 Saccharomyces cerevisiae YJR113C Putative 40S ribosomal protein, similar to Saccharomyces cerevisiae RSM7 (YJR113C); ancestral locus Anc_7.486
YALI1_D10886g	Compare to YALI0D08492g, similar to uniprot|P32844 Saccharomyces cerevisiae YIL068c Exocyst complex component SEC6, similar to Saccharomyces cerevisiae SEC6 (YIL068C); ancestral locus Anc_7.258
YALI1_D10930g	Compare to YALI0D08514g, similar to Saccharomyces cerevisiae CHO1 (YER026C); ancestral locus Anc_3.513, similar to uniprot|P08456 Saccharomyces cerevisiae YER026c CHO1 CDP-diacylglycerol--serine O- phosphatidyltransferase
YALI1_D10961g	Compare to YALI0D08536g, some similarities with uniprot|P40485 Saccharomyces cerevisiae YIL105c, similar to Saccharomyces cerevisiae SLM1 (YIL105C) and SLM2 (YNL047C); ancestral locus Anc_2.267
YALI1_D11015g	Compare to YALI0D08558g, weakly similar to uniprot|P53954 Saccharomyces cerevisiae YNL048w ALG11 required for asparagine-linked glycosylation, similar to Saccharomyces cerevisiae ALG11 (YNL048W); ancestral locus Anc_2.266
YALI1_D11034g	Compare to YALI0D08580g, similar to Saccharomyces cerevisiae MOB1 (YIL106W); ancestral locus Anc_2.265, similar to uniprot|P40484 Saccharomyces cerevisiae YIL106w MOB1 required for completion of mitosis and maintenance of ploidy
YALI1_D11063g	Compare to YALI0D08602g, some similarities with uniprot|Q08023 Saccharomyces cerevisiae YLR077w, similar to Saccharomyces cerevisiae YLR077W; ancestral locus Anc_8.7
YALI1_D11087g	Compare to YALI0D08624g, similar to Saccharomyces cerevisiae SLU7 (YDR088C); ancestral locus Anc_8.222, similar to uniprot|Q8BHJ9 Mus musculus STEP II splicing factor SLU7 homolog
YALI1_D11091g	Compare to YALI0D08635g, similar to Saccharomyces cerevisiae SSS1 (YDR086C); ancestral locus Anc_8.220,gnl|GLV|YALI0D08635g [Yarrowia lipolytica] highly similar to uniprot|P35179 Saccharomyces cerevisiae YDR086c SSS1 ER protein-translocase complex subunit
YALI1_D11115g	Compare to YALI0D08646g, no similarity
YALI1_D11151g	Compare to YALI0D08668g, similar to Saccharomyces cerevisiae RRP1 (YDR087C); ancestral locus Anc_8.221, similar to uniprot|P35178 Saccharomyces cerevisiae YDR087c RRP1 involved in processing rRNA precursor species
YALI1_D11159g	Compare to YALI0D08690g, similar to uniprot|P50136 Mus musculus 2- oxoisovalerate dehydrogenase alpha subunit mitochondrial precursor
YALI1_D11177g	Compare to YALI0D08712g, some similarities with DEHA0D12078g Debaryomyces hansenii IPF 1179.1
YALI1_D11203g	Compare to YALI0D08734g, weakly similar to uniprot|P06843 Saccharomyces cerevisiae YER161c SPT2 multifunctional HMG-like chromatin protein
YALI1_D11242g	Compare to YALI0D08756g, similar to Saccharomyces cerevisiae RAD4 (YER162C); ancestral locus Anc_8.225, weakly similar to uniprot|P14736 Saccharomyces cerevisiae YER162c RAD4 excision repair protein
YALI1_D11256g	Compare to YALI0D08778g, similar to uniprot|P53183 Saccharomyces cerevisiae YGL039w
YALI1_D11272g	Compare to YALI0D08800g, no similarity
YALI1_D11302g	Compare to YALI0D08822g, some similarities with uniprot|P38990 Saccharomyces cerevisiae YER129w PAK1 DNA polymerase alpha suppressing protein kinase
YALI1_D11343g	Compare to YALI0D08844g, similar to uniprot|Q12068 Saccharomyces cerevisiae YOL151w GRE2
YALI1_D11354g	Compare to YALI0D08866g, similar to Saccharomyces cerevisiae SFH5 (YJL145W); ancestral locus Anc_1.205, weakly similar to uniprot|P47008 Saccharomyces cerevisiae YJL145w
YALI1_D11368g	Compare to YALI0D08888g, no similarity, similar to Saccharomyces cerevisiae MCM10 (YIL150C); ancestral locus Anc_5.703
YALI1_D11402g	Compare to YALI0D08910g, some similarities with wi|NCU06337.1 Neurospora crassa NCU06337.1 predicted protein,ancestral locus Anc_5.704
YALI1_D11406g	Compare to YALI0D08932g, weakly similar to uniprot|P87236 Schizosaccharomyces pombe Hypothetical protein, similar to Saccharomyces cerevisiae YDL089W; ancestral locus Anc_2.368
YALI1_D11437g	Compare to YALI0D08954g, weakly similar to uniprot|Q03790 Saccharomyces cerevisiae YMR153w NUP53 component of the karyopherin docking complex of the nuclear pore, similar to Saccharomyces cerevisiae ASM4 (YDL088C) and NUP53 (YMR153W); ancestral locus Anc_2.369
YALI1_D11442g	Compare to YALI0D08976g, similar to Saccharomyces cerevisiae RPN6 (YDL097C); ancestral locus Anc_2.361, similar to uniprot|Q12377 Saccharomyces cerevisiae YDL097c RPN6 subunit of the regulatory particle of the proteasome
YALI1_D11479g	Compare to YALI0D08998g, similar to Saccharomyces cerevisiae NUP84 (YDL116W); ancestral locus Anc_2.320, weakly similar to uniprot|P52891 Saccharomyces cerevisiae YDL116w NUP84 nuclear pore protein
YALI1_D11486g	Compare to YALI0D09020g, no similarity
YALI1_D11514g	Compare to YALI0D09042g, similar to uniprot|P00729 Saccharomyces cerevisiae YMR297w PRC1 carboxypeptidase Y serine-type protease
YALI1_D11542g	Compare to YALI0D09064g, weakly similar to uniprot|Q9P8F7 Yarrowia lipolytica Triacylglycerol lipase precursor
YALI1_D11592g	Compare to YALI0D09086g, weakly similar to uniprot|P38931 Saccharomyces cerevisiae YDR443c SCA1 DNA-directed RNA polymerase II holoenzyme and Srb10 CDK subcomplex subunit, similar to Saccharomyces cerevisiae SSN2 (YDR443C); ancestral locus Anc_5.559
YALI1_D11614g	Compare to YALI0D09119g, highly similar to uniprot|P33297 Saccharomyces cerevisiae YOR117w YTA1 26S proteasome regulatory subunit
YALI1_D11623g	Compare to YALI0D09141g, weakly similar to uniprot|P19659 Saccharomyces cerevisiae YOL051w GAL11 DNA-directed RNA polymerase II holoenzyme and Kornberg s mediator (SRB) subcomplex subunit
YALI1_D11633g	Compare to YALI0D09163g, some similarities with uniprot|Q9FIE4 Arabidopsis thaliana Hypothetical protein
YALI1_D11653g	Compare to YALI0D09185g, some similarities with uniprot|P32323 Saccharomyces cerevisiae YNR044w AGA1 a-agglutinin anchor subunit
YALI1_D11666g	Compare to YALI0D09207g, similar to Saccharomyces cerevisiae HSM3 (YBR272C); ancestral locus Anc_1.333, weakly similar to KLLA0F01342g Kluyveromyces lactis IPF 1872.1
YALI1_D11686g	Compare to YALI0D09229g, weakly similar to uniprot|P36136 Saccharomyces cerevisiae YKR043c possible phosphoglycerate mutase, similar to Saccharomyces cerevisiae YKR043C; ancestral locus Anc_1.240
YALI1_D11722g	Compare to YALI0D09251g, similar to uniprot|P25582 Saccharomyces cerevisiae YCL054w SPB1 required for ribosome synthesis putative methylase
YALI1_D11769g	Compare to YALI0D09273g, highly similar to uniprot|P00044 Saccharomyces cerevisiae YJR048w CYC1 cytochrome-c isoform 1, similar to Saccharomyces cerevisiae CYC7 (YEL039C) and CYC1 (YJR048W); ancestral locus Anc_1.482
YALI1_D11810g	Compare to YALI0D09295g, weakly similar to uniprot|Q03770 Saccharomyces cerevisiae YDR160w transcriptional regulator SSY1 of several transporter genes
YALI1_D11844g	Compare to YALI0D09317g, weakly similar to DEHA0C16291g Debaryomyces hansenii IPF 3459.1
YALI1_D11934g	Compare to YALI0D09333g, gnl|GLV|YALI0D09333g [Yarrowia lipolytica] similar to uniprot|Q9PH93 Xylella fastidiosa Hypothetical protein
YALI1_D11937g	Compare to YALI0D09339g, weakly similar to uniprot|O74251 Emericella nidulans Medusa transcriptional regulator
YALI1_D11984g	Compare to YALI0D09361g, highly similar to uniprot|P19414 Saccharomyces cerevisiae YLR304C Aconitate hydratase mitochondrial precursor (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase)
YALI1_D12028g	Compare to YALI0D09383g, similar to uniprot|Q9P3G4 Neurospora crassa Conserved hypothetical protein
YALI1_D12050g	Compare to YALI0D09427g, weakly similar to uniprot|O74959 Schizosaccharomyces pombe Hypothetical short chain dehydrogenase
YALI1_D12056g	Compare to YALI0D09449g, highly similar to uniprot|P20447 Saccharomyces cerevisiae YGL078C Probable ATP-dependent RNA helicase DBP3 (Helicase CA3)
YALI1_D12074g	Compare to YALI0D09471g, no similarity
YALI1_D12091g	Compare to YALI0D09493g, weakly similar to uniprot|Q9P3G4 Neurospora crassa Conserved hypothetical protein
YALI1_D12147g	Compare to YALI0D09603g, weakly similar to uniprot|Q03103 Saccharomyces cerevisiae YML130c ERO1 required for protein disulfide bond formation in the ER, similar to Saccharomyces cerevisiae ERO1 (YML130C); ancestral locus Anc_8.877
YALI1_D12172g	Compare to YALI0D09625g, similar to Saccharomyces cerevisiae TAF13 (YML098W); ancestral locus Anc_8.878, similar to uniprot|P11747 Saccharomyces cerevisiae YML098w FUN81 TFIID subunit (TBP-associated factor) 19 kD
YALI1_D12198g	Compare to YALI0D09647g, similar to Saccharomyces cerevisiae ARG81 (YML099C); ancestral locus Anc_8.879, weakly similar to uniprot|P05085 Saccharomyces cerevisiae YML099C Arginine metabolism regulation protein II
YALI1_D12252g	Compare to YALI0D09669g, similar to Saccharomyces cerevisiae RRM3 (YHR031C); ancestral locus Anc_5.275, weakly similar to uniprot|P38766 Saccharomyces cerevisiae YHR031C RRM3 and weakly similar to uniprot|P07271 Saccharomyces cerevisiae YML061C PIF1 DNA helicase
YALI1_D12271g	Compare to YALI0D09691g, similar to uniprot|P53972 Saccharomyces cerevisiae YNL022C Hypothetical 56.2 kDa protein in UME3-HDA1 intergenic region
YALI1_D12282g	Compare to YALI0D09713g, highly similar to uniprot|P21576 Saccharomyces cerevisiae YKR001c VPS1 member of the dynamin family of GTPases
YALI1_D12315g	Compare to YALI0D09735g, weakly similar to uniprot|P87139 Schizosaccharomyces pombe Zinc finger protein zf-C3HC4 type (RING finger) protease associated (PA) domain, similar to Saccharomyces cerevisiae ASR1 (YPR093C); ancestral locus Anc_3.405
YALI1_D12342g	Compare to YALI0D09757g, weakly similar to uniprot|P38749 Saccharomyces cerevisiae YHL009c YAP3 transcription factor of a fungal- specific family of bzip proteins singleton
YALI1_D12355g	Compare to YALI0D09779g, some similarities with uniprot|Q06168 Saccharomyces cerevisiae YLR321C related to SNF5P, similar to Saccharomyces cerevisiae SFH1 (YLR321C); ancestral locus Anc_4.131
YALI1_D12403g	Compare to YALI0D09801g, similar to uniprot|Q9URX1 Schizosaccharomyces pombe Hypothetical 55.8 kDa
YALI1_D12447g	Compare to YALI0D09823g, weakly similar to uniprot|P40077 Saccharomyces cerevisiae YER124C DSE1 Daughter cell-specific protein, may participate in pathways regulating cell wall metabolism, similar to Saccharomyces cerevisiae DSE1 (YER124C); ancestral locus Anc_8.133
YALI1_D12483g	Compare to YALI0D09845g, similar to Saccharomyces cerevisiae EAF3 (YPR023C); ancestral locus Anc_8.131, similar to uniprot|Q12432 Saccharomyces cerevisiae YPR023c EAF3 Esa1p-associated factor, nonessential component of the NuA4 acetyltransferase complex
YALI1_D12493g	Compare to YALI0D09867g, similar to Saccharomyces cerevisiae BNA4 (YBL098W); ancestral locus Anc_7.429, similar to uniprot|P38169 Saccharomyces cerevisiae YBL098w related to kynurenine 3-monooxygenase
YALI1_D12513g	Compare to YALI0D09889g, similar to wi|NCU08949.1 Neurospora crassa NCU08949. 1 hypothetical protein
YALI1_D12543g	Compare to YALI0D09911g, similar to Saccharomyces cerevisiae SWC4 (YGR002C); ancestral locus Anc_4.137, similar to uniprot|P53201 Saccharomyces cerevisiae YGR002c
YALI1_D12567g	Compare to YALI0D09933g, similar to uniprot|Q8J0I8 Yarrowia lipolytica Alternative oxidase
YALI1_D12626g	Compare to YALI0D09955g, similar to uniprot|Q10752 Schizosaccharomyces pombe Putative ATP-dependent RNA helicase cdc28
YALI1_D12630g	Compare to YALI0D09977g, similar to Saccharomyces cerevisiae RPN5 (YDL147W); ancestral locus Anc_7.326, similar to uniprot|Q12250 Saccharomyces cerevisiae YDL147W 26S proteasome regulatory subunit RPN5 (Proteasome non-ATPase subunit 5)
YALI1_D12646g	Compare to YALI0D09999g, similar to Saccharomyces cerevisiae YJL049W; ancestral locus Anc_1.334, weakly similar to uniprot|P47048 Saccharomyces cerevisiae YJL049w Hypothetical 52.8 kDa protein in MTR4- GYP6 intergenic region
YALI1_D12690g	Compare to YALI0D10021g, similar to DEHA0B11748g Debaryomyces hansenii
YALI1_D12723g	Compare to YALI0D10043g, similar to uniprot|Q86ZH9 Neurospora crassa 64C2. 200 putative tartrate transporter
YALI1_D12750g	Compare to YALI0D10065g, similar to uniprot|Q12487 Saccharomyces cerevisiae YOR150w MRPL23 ribosomal protein of the large subunit mitochondrial, similar to Saccharomyces cerevisiae MRPL23 (YOR150W); ancestral locus Anc_5.496
YALI1_D12760g	Compare to YALI0D10087g, similar to Saccharomyces cerevisiae YIL001W; ancestral locus Anc_7.143, similar to uniprot|Q10225 Schizosaccharomyces pombe Hypothetical protein C13D6.04c in chromosome I
YALI1_D12790g	Compare to YALI0D10104g, similar to wi|NCU02965.1 Neurospora crassa T50982 origin recognition complex subunit 1 (ORC1) [imported]
YALI1_D12815g	Compare to YALI0D10109g, no similarity
YALI1_D12832g	Compare to YALI0D10131g, similar to uniprot|P06169 Saccharomyces cerevisiae YLR044c PDC1 pyruvate decarboxylase isozyme 1 P7.9.f5.1
YALI1_D12858g	Compare to YALI0D10153g, no similarity
YALI1_D12880g	Compare to YALI0D10175g, no similarity
YALI1_D12909g	Compare to YALI0D10234g, similar to uniprot|P53970 Saccharomyces cerevisiae YNL024c, similar to Saccharomyces cerevisiae YNL024C; ancestral locus Anc_2.289
YALI1_D12930g	Compare to YALI0D10263g, highly similar to uniprot|P04451 Saccharomyces cerevisiae YER117w RPL23B ribosomal protein L23.e, similar to Saccharomyces cerevisiae RPL23A (YBL087C) and RPL23B (YER117W); ancestral locus Anc_7.417
YALI1_D12964g	Compare to YALI0D10285g, weakly similar to uniprot|P53971 Saccharomyces cerevisiae YNL023c FAP1 Shuttle craft like transcriptional regulator with 8 zf-NF-X1 zinc fingers and R3H domain, similar to Saccharomyces cerevisiae FAP1 (YNL023C); ancestral locus Anc_2.288
YALI1_D12996g	Compare to YALI0D10307g, similar to uniprot|P53290 Saccharomyces cerevisiae YGR163W GTP-binding protein GTR2, similar to Saccharomyces cerevisiae GTR2 (YGR163W); ancestral locus Anc_4.54
YALI1_D13019g	Compare to YALI0D10329g, weakly similar to uniprot|O42662 Schizosaccharomyces pombe Possible DNA methylase
YALI1_D13071g	Compare to YALI0D10417g, no similarity
YALI1_D13108g	Compare to YALI0D10461g, no similarity
YALI1_D13124g	Compare to YALI0D10483g, no similarity
YALI1_D13126g	Compare to YALI0D10505g, similar to Saccharomyces cerevisiae NOC3 (YLR002C); ancestral locus Anc_5.222, similar to uniprot|Q07896 Saccharomyces cerevisiae Chromosome XII reading frame ORF YLR002C
YALI1_D13160g	Compare to YALI0D10527g, no similarity possibly noncoding
YALI1_D13201g	Compare to YALI0D10549g, weakly similar to uniprot|O74189 Candida albicans PMT1 Dolichyl-phosphate-mannose-protein mannosyltransferase 1
YALI1_D13226g	Compare to YALI0D10571g, similar to Saccharomyces cerevisiae POL30 (YBR088C); ancestral locus Anc_3.332, similar to uniprot|Q03392 Schizosaccharomyces pombe Proliferating cell nuclear antigen (PCNA)
YALI1_D13238g	Truncated form of YALI0D10593g, similar to uniprot|P40495 Saccharomyces cerevisiae YIL094c LYS12 homo-isocitrate dehydrogenase
YALI1_D13251g	Compare to YALI0D10615g, similar to Saccharomyces cerevisiae SLX8 (YER116C); ancestral locus Anc_7.416, some similarities with uniprot|Q6CG78 Yarrowia lipolytica YALI0B00110g
YALI1_D13298g	Compare to YALI0D10659g, similar to uniprot|Q04869 Saccharomyces cerevisiae YMR315w, similar to Saccharomyces cerevisiae YMR315W
YALI1_D13341g	Compare to YALI0D10681g, weakly similar to DEHA0A03135g Debaryomyces hansenii
YALI1_D13368g	Compare to YALI0D10703g, no similarity
YALI1_D13388g	Compare to YALI0D10725g, no similarity
YALI1_D13403g	Compare to YALI0D10747g, no similarity
YALI1_D13450g	Compare to YALI0D10769g, no similarity
YALI1_D13496g	Compare to YALI0D10791g, similar to Saccharomyces cerevisiae GID8 (YMR135C); ancestral locus Anc_2.396, weakly similar to uniprot|Q10446 Schizosaccharomyces pombe Hypothetical protein C12B10.13 in chromosome I
YALI1_D13510g	Compare to YALI0D10813g, similar to uniprot|Q9P866 Candida albicans Phosphatidylinositol phospholipase C
YALI1_D13545g	Compare to YALI0D10835g, some similarities with uniprot|Q8NKB5 Aspergillus oryzae Secreted aspartic protease
YALI1_D13574g	Compare to YALI0D10857g, some similarities with uniprot|O60140 Schizosaccharomyces pombe Hypothetical 49.1 kDa protein
YALI1_D13611g	Compare to YALI0D10879g, weakly similar to uniprot|P41832 Saccharomyces cerevisiae YNL271c BNI1 regulator of budding
YALI1_D13679g	Compare to YALI0D10901g, similar to uniprot|P21374 Saccharomyces cerevisiae YJR050w UTR3 pre-mRNA splicing factor, similar to Saccharomyces cerevisiae ISY1 (YJR050W); ancestral locus Anc_1.486
YALI1_D13686g	Compare to YALI0D10923g, some similarities with uniprot|Q10274 Schizosaccharomyces pombe Hypothetical protein C13G7.10 in chromosome I
YALI1_D13707g	Compare to YALI0D10945g, no similarity
YALI1_D13716g	Compare to YALI0D10967g, similar to uniprot|Q92389 Yarrowia lipolytica Acid extracellular protease precursor (EC 3.4.23.-)
YALI1_D13788g	Compare to YALI0D10989g, weakly similar to uniprot|Q07527 Saccharomyces cerevisiae YDL112w TRM3 tRNA (guanosine-2 -O-)- methyltransferase, similar to Saccharomyces cerevisiae TRM3 (YDL112W); ancestral locus Anc_2.325
YALI1_D13790g	Compare to YALI0D11000g, similar to uniprot|Q12277 Saccharomyces cerevisiae YDL111C Exosome complex exonuclease RRP42 (EC 3.1.13.-) (Ribosomal RNA processing protein 42), similar to Saccharomyces cerevisiae RRP42 (YDL111C); ancestral locus Anc_2.326
YALI1_D13816g	Compare to YALI0D11022g, some similarities with uniprot|Q03722 Saccharomyces cerevisiae YML020W Hypothetical 76.1 kDa protein in UNG1- OST6 intergenic region
YALI1_D13865g	Compare to YALI0D11044g, weakly similar to uniprot|Q02455 Saccharomyces cerevisiae YKR095w MLP1 myosin-like protein related to USO1P
YALI1_D13871g	Compare to YALI0D11066g, weakly similar to uniprot|P48439 Saccharomyces cerevisiae YOR085w OST3 oligosaccharyltransferase gamma subunit P2.113.f2.1
YALI1_D13916g	Compare to YALI0D11088g, weakly similar to uniprot|Q07533 Saccharomyces cerevisiae YDL117w CYK3 similarity to hypothetical S. pombe protein protein possibly involved in cytokinesis, similar to Saccharomyces cerevisiae CYK3 (YDL117W); ancestral locus Anc_2.319
YALI1_D13963g	Compare to YALI0D11110g, similar to uniprot|P00937 Saccharomyces cerevisiae YKL211C Anthranilate synthase component II (PRAI), similar to Saccharomyces cerevisiae TRP3 (YKL211C); ancestral locus Anc_1.532
YALI1_D13976g	Compare to YALI0D11125g, gnl|GLV|YALI0D11125g [Yarrowia lipolytica] similar to uniprot|Q92374 Schizosaccharomyces pombe Replication factor-A protein 3 (Single-stranded DNA- binding protein P12 subunit)
YALI1_D14004g	Compare to YALI0D11132g, similar to Saccharomyces cerevisiae DOA1 (YKL213C); ancestral locus Anc_1.534, similar to uniprot|P36037 Saccharomyces cerevisiae YKL213c DOA1 involved in ubiquitin-dependent proteolysis P29.1.f3.1
YALI1_D14058g	Compare to YALI0D11176g, similar to uniprot|P47169 Saccharomyces cerevisiae YJR137c ECM17 involved in cell wall biogenesis and architecture
YALI1_D14097g	Compare to YALI0D11198g, similar to Saccharomyces cerevisiae VPS53 (YJL029C); ancestral locus Anc_5.245, similar to uniprot|P47061 Saccharomyces cerevisiae YJL029c VPS53 subunit of VP52-54 complex required for protein sorting at the yeast late Golgi singleton
YALI1_D14104g	Compare to YALI0D11220g, similar to uniprot|P47079 Saccharomyces cerevisiae YJL008C T-complex protein 1 theta subunit (TCP-1-theta) (CCT-theta), similar to Saccharomyces cerevisiae CCT8 (YJL008C); ancestral locus Anc_5.246
YALI1_D14125g	Compare to YALI0D11242g, similar to uniprot|P47077 Saccharomyces cerevisiae YJL010C Hypothetical 77.7 kDa protein in CCT3-CCT8 intergenic region, similar to Saccharomyces cerevisiae YJL010C; ancestral locus Anc_5.247
YALI1_D14156g	Compare to YALI0D11264g, similar to uniprot|P35719 Saccharomyces cerevisiae YKL142w MRP8 ribosomal protein mitochondrial singleton, similar to Saccharomyces cerevisiae MRP8 (YKL142W); ancestral locus Anc_5.248
YALI1_D14180g	Compare to YALI0D11286g, no similarity
YALI1_D14190g	Compare to YALI0D11308g, similar to Saccharomyces cerevisiae YKL151C; ancestral locus Anc_5.256, similar to uniprot|P36059 Saccharomyces cerevisiae YKL151c similarity to C.elegans hypothetical protein R107. 2 and uniprot|O94347 Schizosaccharomyces pombe Conserved hypothetical protein
YALI1_D14199g	Compare to YALI0D11330g, similar to Saccharomyces cerevisiae MCR1 (YKL150W); ancestral locus Anc_5.255, similar to uniprot|P36060 Saccharomyces cerevisiae YKL150w MCR1 cytochrome-b5 reductase
YALI1_D14224g	Compare to YALI0D11352g, similar to Saccharomyces cerevisiae DBR1 (YKL149C); ancestral locus Anc_5.254, weakly similar to uniprot|P24309 Saccharomyces cerevisiae YKL149c DBR1 lariat-debranching enzyme
YALI1_D14260g	Compare to YALI0D11374g, similar to Saccharomyces cerevisiae YJL045W and SDH1 (YKL148C); ancestral locus Anc_5.253, similar to uniprot|P47052 Saccharomyces cerevisiae Probable succinate dehydrogenase [ubiquinone] flavoprotein subunit 2 mitochondrial precursor (EC 1.3.5.1) (FP) (Flavoprotein subunit of complex II) and uniprot|Q00711 Saccharomyces cerevisiae YKL148c SDH1 succinate dehydrogenase flavoprotein precursor P2.302.f2.1
YALI1_D14276g	Compare to YALI0D11396g, similar to Saccharomyces cerevisiae RPC25 (YKL144C); ancestral locus Anc_5.250, similar to uniprot|P35718 Saccharomyces cerevisiae YKL144c RPC25 DNA-direcred RNA polymerase III 25 KD subunit singleton
YALI1_D14300g	Compare to YALI0D11418g, similar to Saccharomyces cerevisiae RPT1 (YKL145W); ancestral locus Anc_5.251, similar to uniprot|P33299 Saccharomyces cerevisiae YKL145W 26S protease regulatory subunit 7 homolog (CIM5 protein) (TAT-binding homolog 3)
YALI1_D14304g	Compare to YALI0D11440g, weakly similar to CAGL0F07557g Candida glabrata and uniprot|Q9C609 Arabidopsis thaliana Hypothetical 35.1 kDa protein, similar to Saccharomyces cerevisiae YJU2 (YKL095W); ancestral locus Anc_2.486
YALI1_D14329g	Compare to YALI0D11462g, similar to uniprot|Q06631 Saccharomyces cerevisiae YDR299w BFR2 involved in protein transport steps at the Brefeldin A blocks singleton, similar to Saccharomyces cerevisiae BFR2 (YDR299W); ancestral locus Anc_5.316
YALI1_D14333g	Compare to YALI0D11484g, weakly similar to uniprot|P23193 Homo sapiens Transcription elongation factor A protein 1
YALI1_D14391g	Truncated form of YALI0D11506g, weakly similar to uniprot|P47171 Saccharomyces cerevisiae YJR140c HIR3 involved in cell cycle regulation of histone transcription singleton, similar to Saccharomyces cerevisiae HIR3 (YJR140C); ancestral locus Anc_4.375
YALI1_D14400g	Compare to YALI0D11528g, weakly similar to DEHA0F05566g Debaryomyces hansenii, similar to Saccharomyces cerevisiae YJR141W; ancestral locus Anc_4.376
YALI1_D14423g	Converted to coding from non-coding YALI0D11550g, similar to Saccharomyces cerevisiae PPX1 (YHR201C); ancestral locus Anc_4.377, similar to uniprot|P38698 Saccharomyces cerevisiae YHR201c PPX1 exopolyphosphatase singleton frameshift
YALI1_D14424g	Compare to YALI0D11572g, similar to Saccharomyces cerevisiae TIM8 (YJR135W-A); ancestral locus Anc_4.367, similar to uniprot|P57744 Saccharomyces cerevisiae YJR135wa delivers Proteins across the intermembrane space of mitochondria to the TIM22 complex
YALI1_D14431g	Compare to YALI0D11594g, no similarity, similar to Saccharomyces cerevisiae YJR136C; ancestral locus Anc_4.368
YALI1_D14453g	Compare to YALI0D11616g, similar to uniprot|P53111 Saccharomyces cerevisiae YGL157w
YALI1_D14462g	Compare to YALI0D11627g, gnl|GLV|YALI0D11627g [Yarrowia lipolytica] similar to uniprot|P34087 Saccharomyces cerevisiae YDR404c DNA-directed RNA polymerase II 19 kDa polypeptide, similar to Saccharomyces cerevisiae RPB7 (YDR404C); ancestral locus Anc_5.495
YALI1_D14477g	Compare to YALI0D11638g, similar to uniprot|Q6C285 Yarrowia lipolytica YALI0F09944g
YALI1_D14489g	Compare to YALI0D11660g, similar to uniprot|Q8RCT3 Thermoanaerobacter tengcongensis Uncharacterized enzyme involved in pigment biosynthesis
YALI1_D14500g	Compare to YALI0D11682g, weakly similar to uniprot|Q9USY1 Schizosaccharomyces pombe Conserved hypothetical protein
YALI1_D14532g	Compare to YALI0D11704g, similar to Saccharomyces cerevisiae HOM3 (YER052C); ancestral locus Anc_7.226, similar to uniprot|P10869 Saccharomyces cerevisiae YER052c HOM3 L-aspartate 4-P-transferase singleton
YALI1_D14560g	Compare to YALI0D11726g, similar to uniprot|Q07800 Saccharomyces cerevisiae YLL010c PSR1 plasma membrane phosphatase involved in sodium stress response
YALI1_D14585g	Compare to YALI0D11748g, some similarities with uniprot|P33296 Saccharomyces cerevisiae YER100w Ubiquitin-conjugating enzyme E2-28.4 kDa (EC 6.3.2.19)
YALI1_D14609g	Compare to YALI0D11770g, similar to Saccharomyces cerevisiae BCS1 (YDR375C); ancestral locus Anc_5.448, highly similar to uniprot|P33298 Saccharomyces cerevisiae YDR394w YTA2 26S proteasome regulatory subunit
YALI1_D14628g	Compare to YALI0D11792g, similar to CA0750|IPF6284 Candida albicans IPF6284 unknown function
YALI1_D14639g	Compare to YALI0D11814g, similar to Saccharomyces cerevisiae ATP17 (YDR377W); ancestral locus Anc_5.451, similar to uniprot|Q06405 Saccharomyces cerevisiae YDR377w ATP17 ATP synthase complex subunit f
YALI1_D14670g	Compare to YALI0D11836g, similar to uniprot|P38176 Saccharomyces cerevisiae YBL089W Hypothetical 57.1 kDa protein possible amino acid permease
YALI1_D14695g	Compare to YALI0D11858g, uniprot|Q8NJX0 Yarrowia lipolytica Integral peroxisomal membrane peroxin
YALI1_D14725g	Compare to YALI0D11880g, similar to Saccharomyces cerevisiae BUD4 (YJR092W); ancestral locus Anc_7.463, weakly similar to uniprot|P47136 Saccharomyces cerevisiae YJR092w BUD4 budding protein
YALI1_D14805g	Compare to YALI0D11924g, similar to uniprot|Q6CDX1 Yarrowia lipolytica YALI0B20548g
YALI1_D14840g	Compare to YALI0D11968g, similar to Saccharomyces cerevisiae VPS30 (YPL120W); ancestral locus Anc_8.615, similar to uniprot|Q02948 Saccharomyces cerevisiae YPL120w VPS30 involved in vacuolare protein sorting and autophagy singleton
YALI1_D14866g	Compare to YALI0D11990g, similar to Saccharomyces cerevisiae YOR205C; ancestral locus Anc_8.616, no similarity
YALI1_D14893g	Compare to YALI0D12012g, similar to uniprot|P39744 Saccharomyces cerevisiae YOR206w (RAD4) crucial for intranuclear movement of ribosomal precursor, similar to Saccharomyces cerevisiae NOC2 (YOR206W); ancestral locus Anc_8.617
YALI1_D14915g	Compare to YALI0D12056g, similar to Saccharomyces cerevisiae GIS2 (YNL255C); ancestral locus Anc_1.105, similar to uniprot|P36627 Schizosaccharomyces pombe BYR3_SCHPO Cellular nucleic acid binding protein
YALI1_D14986g	Compare to YALI0D12078g, similar to Saccharomyces cerevisiae FUN19 (YAL034C) and YOR338W; ancestral locus Anc_7.55, some similarities with uniprot|Q99326 Saccharomyces cerevisiae ORF YOR338W
YALI1_D15030g	Compare to YALI0D12100g, similar to DEHA0E10494g Debaryomyces hansenii related to allantoate transporters
YALI1_D15063g	Compare to YALI0D12122g, similar to Saccharomyces cerevisiae CYB5 (YNL111C); ancestral locus Anc_2.166, similar to uniprot|P40312 Saccharomyces cerevisiae YNL111c CYB5 cytochrome b5
YALI1_D15114g	Compare to YALI0D12144g, similar to uniprot|Q06142 Saccharomyces cerevisiae YLR347c KAP95 karyopherin-beta singleton, similar to Saccharomyces cerevisiae KAP95 (YLR347C); ancestral locus Anc_4.180
YALI1_D15149g	Compare to YALI0D12166g, some similarities with uniprot|P30620 Saccharomyces cerevisiae YMR137c PSO2 DNA repair protein singleton, similar to Saccharomyces cerevisiae PSO2 (YMR137C); ancestral locus Anc_2.394
YALI1_D15181g	Compare to YALI0D12188g, some similarities with uniprot|O13339 Schizosaccharomyces pombe Telomerase reverse transcriptase EST2, similar to Saccharomyces cerevisiae EST2 (YLR318W); ancestral locus Anc_4.134
YALI1_D15214g	Compare to YALI0D12210g, similar to uniprot|P47047 Saccharomyces cerevisiae YJL050W ATP-dependent RNA helicase DOB1
YALI1_D15245g	Compare to YALI0D12232g, no similarity
YALI1_D15296g	Compare to YALI0D12254g, similar to Saccharomyces cerevisiae ISD11 (YER048W-A); ancestral locus Anc_7.219, similar to uniprot|Q6Q560 Saccharomyces cerevisiae YER048W-A
YALI1_D15304g	Compare to YALI0D12276g, some similarities with uniprot|Q6C8A5 Yarrowia lipolytica YALI0D21340g
YALI1_D15333g	Compare to YALI0D12320g, similar to Saccharomyces cerevisiae MRP7 (YNL005C); ancestral locus Anc_1.410, similar to uniprot|P48535 Kluyveromyces lactis 60S ribosomal protein L2 mitochondrial precursor
YALI1_D15362g	Compare to YALI0D12342g, similar to Saccharomyces cerevisiae CTR86 (YCR054C); ancestral locus Anc_6.324, no similarity
YALI1_D15367g	Compare to YALI0D12364g, similar to Saccharomyces cerevisiae POL4 (YCR014C); ancestral locus Anc_1.429, some similarities with uniprot|Q9QXE2 Mus musculus DNA polymerase lambda
YALI1_D15398g	Compare to YALI0D12386g, similar to uniprot|P53111 Saccharomyces cerevisiae YGL157w and DEHA0A06347g Debaryomyces hansenii
YALI1_D15424g	Compare to YALI0D12400g, uniprot|P29407 Yarrowia lipolytica Phosphoglycerate kinase, similar to Saccharomyces cerevisiae PGK1 (YCR012W); ancestral locus Anc_1.428
YALI1_D15458g	Compare to YALI0D12408g, similar to Saccharomyces cerevisiae RDI1 (YDL135C); ancestral locus Anc_7.303, similar to uniprot|Q12434 Saccharomyces cerevisiae YDL135C Rho GDP-dissociation inhibitor (Rho GDI)
YALI1_D15506g	Compare to YALI0D12430g, no similarity
YALI1_D15523g	Compare to YALI0D12452g, similar to uniprot|P54860 Saccharomyces cerevisiae YDL190c UFD2 ubiquitin fusion degradation protein, similar to Saccharomyces cerevisiae UFD2 (YDL190C); ancestral locus Anc_7.305
YALI1_D15568g	Compare to YALI0D12474g, weakly similar to uniprot|P48569 Saccharomyces cerevisiae YDL183c, similar to Saccharomyces cerevisiae YDL183C; ancestral locus Anc_7.298
YALI1_D15597g	Compare to YALI0D12496g, weakly similar to DEHA0D16797g Debaryomyces hansenii, similar to Saccharomyces cerevisiae YDL133W; ancestral locus Anc_7.297
YALI1_D15622g	Compare to YALI0D12518g, similar to Saccharomyces cerevisiae CDC53 (YDL132W); ancestral locus Anc_7.296, similar to uniprot|Q12018 Saccharomyces cerevisiae YDL132w CDC53 controls G1/S transition
YALI1_D15692g	Compare to YALI0D12540g, weakly similar to uniprot|Q03868 Saccharomyces cerevisiae YDR104c SPO71 protein involved in spore wall formation singleton, similar to Saccharomyces cerevisiae SPO71 (YDR104C); ancestral locus Anc_8.248
YALI1_D15696g	Compare to YALI0D12562g, weakly similar to DEHA0D16863g Debaryomyces hansenii
YALI1_D15734g	Compare to YALI0D12584g, similar to uniprot|Q9P602 Neurospora crassa ATP synthase oligomycin sensitivity conferring protein mitochondrial precursor, similar to Saccharomyces cerevisiae ATP5 (YDR298C); ancestral locus Anc_5.315
YALI1_D15744g	Compare to YALI0D12606g, similar to uniprot|P32611 Saccharomyces cerevisiae Putative 60S mitochondrial ribosomal protein YEL050C, similar to Saccharomyces cerevisiae RML2 (YEL050C); ancestral locus Anc_5.516
YALI1_D15792g	Compare to YALI0D12628g, similar to uniprot|P52958 Fusarium solani Cutinase transcription factor 1 alpha
YALI1_D15848g	Compare to YALI0D12661g, weakly similar to uniprot|P00175 Saccharomyces cerevisiae YML054c CYB2 lactate dehydrogenase cytochrome b2
YALI1_D15865g	Compare to YALI0D12683g, no similarity
YALI1_D15897g	Compare to YALI0D12705g, similar to DEHA0B08327g Debaryomyces hansenii, similar to Saccharomyces cerevisiae APC4 (YDR118W); ancestral locus Anc_8.270
YALI1_D15902g	Compare to YALI0D12727g, weakly similar to uniprot|Q04600 Saccharomyces cerevisiae YDR117c, similar to Saccharomyces cerevisiae TMA64 (YDR117C); ancestral locus Anc_8.269
YALI1_D15937g	Compare to YALI0D12749g, similar to Saccharomyces cerevisiae GPI17 (YDR434W); ancestral locus Anc_5.545, similar to uniprot|Q875G6 Podospora anserina
YALI1_D15952g	Compare to YALI0D12771g, similar to Saccharomyces cerevisiae MRPL1 (YDR116C); ancestral locus Anc_8.268, similar to uniprot|Q04599 Saccharomyces cerevisiae YDR116c
YALI1_D15963g	Compare to YALI0D12793g, similar to Saccharomyces cerevisiae YDR115W; ancestral locus Anc_8.267, weakly similar to uniprot|Q04598 Saccharomyces cerevisiae YDR115w similarity to bacterial ribosomal L34 proteins
YALI1_D15965g	Compare to YALI0D12815g, similar to DEHA0B07920g Debaryomyces hansenii
YALI1_D15974g	Compare to YALI0D12837g, similar to Saccharomyces cerevisiae TRM9 (YML014W); ancestral locus Anc_5.544, similar to uniprot|P49957 Saccharomyces cerevisiae YML014w
YALI1_D15983g	Compare to YALI0D12859g, weakly similar to uniprot|Q8C1X3 Mus musculus Hypothetical S-adenosyl-L-methionine-dependent methyltransferases structure containing protein
YALI1_D16009g	Compare to YALI0D12881g, similar to uniprot|O94257 Schizosaccharomyces pombe Conserved hypothetical protein, similar to Saccharomyces cerevisiae PPM1 (YDR435C); ancestral locus Anc_5.547
YALI1_D16029g	Compare to YALI0D12903g, similar to Saccharomyces cerevisiae RPS4B (YHR203C) and RPS4A (YJR145C); ancestral locus Anc_4.382, uniprot|O59950 Yarrowia lipolytica 40S ribosomal protein S4 (S7)
YALI1_D16047g	Compare to YALI0D12925g, similar to Saccharomyces cerevisiae MNL1 (YHR204W); ancestral locus Anc_4.383, some similarities with uniprot|P38888 Saccharomyces cerevisiae YHR204w HTM1
YALI1_D16086g	Compare to YALI0D12947g, similar to Saccharomyces cerevisiae KAR5 (YMR065W); ancestral locus Anc_2.632, weakly similar to uniprot|Q04746 Saccharomyces cerevisiae YMR065w KAR5 nuclear fusion protein
YALI1_D16118g	Compare to YALI0D12969g, similar to uniprot|P43602 Saccharomyces cerevisiae YFR022w
YALI1_D16144g	Converted to coding from non-coding YALI0D13002g, similar to uniprot|O88068 Streptomyces coelicolor Putative dehydrogenase frameshift
YALI1_D16151g	Compare to YALI0D13024g, similar to uniprot|Q96WJ7 Blumeria graminis Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia ligase)
YALI1_D16173g	Compare to YALI0D13046g, similar to |P43558 uniprot|P43558 Saccharomyces cerevisiae YFL044c and Schizosaccharomyces pombe Hypothetical zinc finger protein, similar to Saccharomyces cerevisiae OTU1 (YFL044C); ancestral locus Anc_8.12
YALI1_D16206g	Compare to YALI0D13068g, similar to Saccharomyces cerevisiae BUD20 (YLR074C); ancestral locus Anc_8.11, similar to uniprot|Q08004 Saccharomyces cerevisiae Chromosome XII reading frame ORF YLR074C zinc finger protein
YALI1_D16236g	Compare to YALI0D13090g, similar to uniprot|Q12017 Saccharomyces cerevisiae YOR281c PLP2 IAP-associated factor Viaf1, similar to Saccharomyces cerevisiae PLP2 (YOR281C); ancestral locus Anc_8.743
YALI1_D16249g	Compare to YALI0D13104g, similar to uniprot|P41805 Saccharomyces cerevisiae YLR075w GRC5 60S large subunit ribosomal protein, similar to Saccharomyces cerevisiae RPL10 (YLR075W); ancestral locus Anc_8.10
YALI1_D16290g	Compare to YALI0D13112g, similar to Saccharomyces cerevisiae SEC53 (YFL045C); ancestral locus Anc_8.9, highly similar to uniprot|P31353 Candida albicans Phosphomannomutase SEC53 (PMM)
YALI1_D16314g	Compare to YALI0D13134g, similar to Saccharomyces cerevisiae YFL046W; ancestral locus Anc_8.8, similar to uniprot|P43557 Saccharomyces cerevisiae YFL046w
YALI1_D16370g	Compare to YALI0D13156g, weakly similar to uniprot|P38966 Saccharomyces cerevisiae YDR089w, similar to Saccharomyces cerevisiae YDR089W; ancestral locus Anc_8.223
YALI1_D16431g	Compare to YALI0D13178g, similar to uniprot|Q12509 Saccharomyces cerevisiae YLR085c ARP6 Actin-related protein P8.3.f5.1
YALI1_D16441g	Compare to YALI0D13200g, no similarity
YALI1_D16471g	Converted to coding from non-coding YALI0D13222g, no similarity
YALI1_D16531g	Compare to YALI0D13255g, no similarity, no similarity
YALI1_D16567g	Compare to YALI0D13288g, no similarity possibly noncoding
YALI1_D16609g	Compare to YALI0D13442g, similar to |P47160 uniprot|P47160 Saccharomyces cerevisiae YJR125c ENT3 cytoskeletal adaptor P3.83.f3.1 and Schizosaccharomyces pombe Hypothetical 51.8 kDa protein
YALI1_D16656g	Compare to YALI0D13464g, similar to uniprot|Q04500 Saccharomyces cerevisiae YML093w, similar to Saccharomyces cerevisiae UTP14 (YML093W); ancestral locus Anc_8.872
YALI1_D16672g	Compare to YALI0D13486g, similar to Saccharomyces cerevisiae YDR161W; ancestral locus Anc_8.343, similar to DEHA0E17215g Debaryomyces hansenii
YALI1_D16679g	Compare to YALI0D13508g, similar to Saccharomyces cerevisiae GIR2 (YDR152W); ancestral locus Anc_8.334, similar to uniprot|Q03768 Saccharomyces cerevisiae YDR152w
YALI1_D16709g	Compare to YALI0D13530g, no similarity
YALI1_D16756g	Compare to YALI0D13552g, weakly similar to uniprot|Q12361 Saccharomyces cerevisiae YDL035c GPR1 G-protein coupled receptor, similar to Saccharomyces cerevisiae GPR1 (YDL035C); ancestral locus Anc_3.156
YALI1_D16783g	Compare to YALI0D13574g, similar to uniprot|Q12367 Saccharomyces cerevisiae YLR137w, similar to Saccharomyces cerevisiae YLR137W; ancestral locus Anc_8.339
YALI1_D16809g	Compare to YALI0D13596g, similar to Saccharomyces cerevisiae HOM2 (YDR158W); ancestral locus Anc_8.338, highly similar to uniprot|P13663 Saccharomyces cerevisiae YDR158w HOM2 aspartate-semialdehyde dehydrogenase
YALI1_D16843g	Compare to YALI0D13618g, no similarity
YALI1_D16864g	Compare to YALI0D13640g, similar to Saccharomyces cerevisiae YHR202W; ancestral locus Anc_4.381, similar to uniprot|P38887 Saccharomyces cerevisiae YHR202w
YALI1_D16891g	Compare to YALI0D13662g, no similarity
YALI1_D16932g	Compare to YALI0D13684g, similar to Saccharomyces cerevisiae SAC7 (YDR389W) and BAG7 (YOR134W); ancestral locus Anc_5.471, some similarities with uniprot|P17121 Saccharomyces cerevisiae YDR389W GTPase activating protein SAC7
YALI1_D16981g	Compare to YALI0D13706g, similar to Saccharomyces cerevisiae RVS167 (YDR388W); ancestral locus Anc_5.470, similar to uniprot|P39743 Saccharomyces cerevisiae YDR388w RVS167 Reduced viability upon starvation
YALI1_D17030g	Compare to YALI0D13728g, similar to Saccharomyces cerevisiae RPS24A (YER074W) and RPS24B (YIL069C); ancestral locus Anc_7.262, similar to uniprot|P26782 Saccharomyces cerevisiae YIL069c RP50B 40S small subunit ribosomal protein S24.e
YALI1_D17051g	Compare to YALI0D13750g, similar to uniprot|Q02792 Saccharomyces cerevisiae YOR048c RAT1 5 -3 exoribonuclease P2.117.f2.1
YALI1_D17090g	Compare to YALI0D13772g, no similarity
YALI1_D17108g	Compare to YALI0D13794g, highly similar to uniprot|P05760 Saccharomyces cerevisiae YJL136c RPS25B 40S small subunit ribosomal protein, similar to Saccharomyces cerevisiae RPS21B (YJL136C) and RPS21A (YKR057W); ancestral locus Anc_1.213
YALI1_D17151g	Compare to YALI0D13838g, weakly similar to uniprot|P45978 Saccharomyces cerevisiae YPR129w SCD6 suppressor of clathrin deficiency, similar to Saccharomyces cerevisiae SCD6 (YPR129W); ancestral locus Anc_3.464
YALI1_D17181g	Compare to YALI0D13860g, similar to Saccharomyces cerevisiae NAT3 (YPR131C); ancestral locus Anc_3.465, similar to uniprot|Q06504 Saccharomyces cerevisiae YPR131c NAT3 N-acetyltransferase complex subunit ARD1P
YALI1_D17206g	Compare to YALI0D13882g, similar to Saccharomyces cerevisiae RPL12B (YDR418W) and RPL12A (YEL054C); ancestral locus Anc_5.522, highly similar to uniprot|P17079 Saccharomyces cerevisiae YEL054c RPL12A and highly similar to uniprot|P17079 Saccharomyces cerevisiae YDR418W RPL12B Ribosomal Protein of the Large subunit
YALI1_D17249g	Compare to YALI0D13904g, similar to uniprot|P08638 Saccharomyces cerevisiae YLR451w LEU3 transcription factor, similar to Saccharomyces cerevisiae LEU3 (YLR451W); ancestral locus Anc_7.512
YALI1_D17268g	Compare to YALI0D13948g, similar to uniprot|Q10272 Schizosaccharomyces pombe WD- repeat protein crb3, similar to Saccharomyces cerevisiae IPI3 (YNL182C); ancestral locus Anc_2.73
YALI1_D17299g	Compare to YALI0D13970g, similar to uniprot|P15365 Saccharomyces cerevisiae YJR152w DAL5 allantoate permease
YALI1_D17336g	Compare to YALI0D13992g, no similarity
YALI1_D17355g	Compare to YALI0D14058g, highly similar to uniprot|P25043 Saccharomyces cerevisiae YOR157c PUP1 20S proteasome subunit (beta2), similar to Saccharomyces cerevisiae PUP1 (YOR157C); ancestral locus Anc_5.507
YALI1_D17370g	Compare to YALI0D14080g, similar to uniprot|P33750 Saccharomyces cerevisiae YLL011w SOF1 involved in 18S pre-rRNA production, similar to Saccharomyces cerevisiae SOF1 (YLL011W); ancestral locus Anc_5.201
YALI1_D17410g	Compare to YALI0D14102g, similar to Saccharomyces cerevisiae SMB1 (YER029C); ancestral locus Anc_3.519, similar to uniprot|P40018 Saccharomyces cerevisiae YER029c SMB1 associated with U1 snRNP as part of the Sm- core that is common to all spliceosomal snRNPs
YALI1_D17462g	Compare to YALI0D14300g, similar to uniprot|Q12303 Saccharomyces cerevisiae YLR121c YPS3 GPI-anchored aspartyl protease 3 (yapsin 3)
YALI1_D17482g	Compare to YALI0D14322g, similar to uniprot|P38075 Saccharomyces cerevisiae YBR035c PDX3 pyridoxamine-phosphate oxidase
YALI1_D17493g	Compare to YALI0D14344g, similar to Saccharomyces cerevisiae YOR164C; ancestral locus Anc_6.57, similar to uniprot|Q8X0N5 Neurospora crassa Conserved hypothetical protein
YALI1_D17507g	Compare to YALI0D14366g, weakly similar to uniprot|Q6C943 Yarrowia lipolytica YALI0D14388g
YALI1_D17524g	Compare to YALI0D14388g, weakly similar to uniprot|Q6C944 Yarrowia lipolytica YALI0D14366g
YALI1_D17564g	Compare to YALI0D14410g, similar to Saccharomyces cerevisiae EDC3 (YEL015W); ancestral locus Anc_1.442, weakly similar to DEHA0C15796g Debaryomyces hansenii IPF 3508.1
YALI1_D17577g	Compare to YALI0D14432g, no similarity
YALI1_D17593g	Compare to YALI0D14454g, similar to Saccharomyces cerevisiae YOL107W; ancestral locus Anc_3.76, similar to wi|NCU06839.1 Neurospora crassa NCU06839. 1 hypothetical protein
YALI1_D17620g	Compare to YALI0D14476g, similar to uniprot|P31688 Saccharomyces cerevisiae YDR074w TPS2 alpha alpha-trehalose-phosphate synthase 102 KD subunit (trehalose 6-P phosphatase activity)
YALI1_D17666g	Compare to YALI0D14498g, similar to Saccharomyces cerevisiae PNS1 (YOR161C); ancestral locus Anc_5.502, similar to uniprot|Q870V7 Neurospora crassa B14A21. 150 Related to transporter-like protein CTL
YALI1_D17710g	Compare to YALI0D14520g, weakly similar to uniprot|P38889 Saccharomyces cerevisiae YHR206w SKN7 transcription factor response regulator receiver of two components sensing
YALI1_D17770g	Truncated form of YALI0D14542g, similar to uniprot|P11792 Saccharomyces cerevisiae YHR205w SCH9 serine/threonine protein kinase involved in stress response and nutrient-sensing signaling pathway
YALI1_D17795g	Compare to YALI0D14564g, similar to uniprot|O42636 Neurospora crassa CIA30 Complex I intermediate-associated protein 30 mitochondrial precursor
YALI1_D17829g	Compare to YALI0D14586g, weakly similar to uniprot|O94023 Candida albicans Hypothetical 14.4 kDa protein
YALI1_D17854g	Compare to YALI0D14608g, weakly similar to uniprot|Q8T6B4 Dictyostelium discoideum Non-transporter ABC protein AbcF4
YALI1_D17885g	Truncated form of YALI0D14630g, similar to Saccharomyces cerevisiae YPT31 (YER031C) and YPT32 (YGL210W); ancestral locus Anc_3.521, similar to uniprot|P51996 Saccharomyces cerevisiae YGL210w YPT32 small GTP-binding protein essential for Golgi function
YALI1_D17899g	Compare to YALI0D14652g, similar to Saccharomyces cerevisiae SPT16 (YGL207W); ancestral locus Anc_3.516, similar to uniprot|P32558 Saccharomyces cerevisiae YGL207w SPT16 general chromatin factor
YALI1_D17930g	Compare to YALI0D14674g, weakly similar to uniprot|O74959 Schizosaccharomyces pombe Hypothetical short chain dehydrogenase
YALI1_D17970g	Compare to YALI0D14740g, similar to Saccharomyces cerevisiae RIM13 (YMR154C); ancestral locus Anc_2.367, uniprot|Q9HFC8 Yarrowia lipolytica PalB protein involved in pH sensing mating and meiosis
YALI1_D17983g	Compare to YALI0D14762g, similar to Saccharomyces cerevisiae RAM1 (YDL090C); ancestral locus Anc_2.366, similar to uniprot|P22007 Saccharomyces cerevisiae YDL090c RAM1 protein farnesyltransferase beta subunit
YALI1_D18014g	Compare to YALI0D14784g, similar to Saccharomyces cerevisiae UBX3 (YDL091C); ancestral locus Anc_2.365, weakly similar to uniprot|O74498 Schizosaccharomyces pombe Hypothetical protein with UBX Domain present in ubiquitin-regulatory proteins
YALI1_D18037g	Compare to YALI0D14850g, similar to uniprot|P32463 Saccharomyces cerevisiae YKL192c ACP1 mitochonrial acyl-carrier protein, similar to Saccharomyces cerevisiae ACP1 (YKL192C); ancestral locus Anc_4.297
YALI1_D18089g	Compare to YALI0D14872g, weakly similar to uniprot|Q9P6I9 Schizosaccharomyces pombe Putative transcriptional activator zinc finger containing
YALI1_D18130g	Compare to YALI0D14894g, similar to uniprot|P05150 Saccharomyces cerevisiae YJL088w ARG3 ornithine carbamoyltransferase, similar to Saccharomyces cerevisiae ARG3 (YJL088W); ancestral locus Anc_1.279
YALI1_D18167g	Compare to YALI0D14916g, similar to uniprot|P09880 Saccharomyces cerevisiae YJL087c TRL1 tRNA ligase, similar to Saccharomyces cerevisiae TRL1 (YJL087C); ancestral locus Anc_1.280
YALI1_D18190g	Compare to YALI0D14982g, similar to uniprot|Q06102 Saccharomyces cerevisiae YPR107c YTH1 protein of the 3 processing complex, similar to Saccharomyces cerevisiae YTH1 (YPR107C); ancestral locus Anc_3.422
YALI1_D18198g	Compare to YALI0D15004g, similar to Saccharomyces cerevisiae TRS120 (YDR407C); ancestral locus Anc_5.506, weakly similar to uniprot|Q04183 Saccharomyces cerevisiae YDR407c TRS120 TRAPP subunit of 120 kDa involved in targeting and fusion of ER to golgi
YALI1_D18251g	Compare to YALI0D15026g, similar to Saccharomyces cerevisiae YJL163C; ancestral locus Anc_1.183, weakly similar to uniprot|P46996 Saccharomyces cerevisiae YJL163c
YALI1_D18274g	Compare to YALI0D15048g, no similarity
YALI1_D18373g	Compare to YALI0D15070g, no similarity
YALI1_D18383g	Compare to YALI0D15092g, similar to Saccharomyces cerevisiae MOH1 (YBL049W); ancestral locus Anc_7.492, similar to uniprot|Q8LE51 Arabidopsis thaliana Yippee- like protein 26S proteasome non-ATPase regulatory subunit
YALI1_D18408g	Compare to YALI0D15114g, similar to uniprot|Q96UC2 Neurospora crassa Conserved hypothetical protein, similar to Saccharomyces cerevisiae MPA43 (YNL249C); ancestral locus Anc_1.111
YALI1_D18442g	Compare to YALI0D15136g, no similarity
YALI1_D18475g	Compare to YALI0D15158g, some similarities with uniprot|Q9XE85 Sorghum bicolor Polyprotein (putative retroelement)
YALI1_D18495g	Compare to YALI0D15180g, no similarity
YALI1_D18555g	Compare to YALI0D15246g, similar to uniprot|P12753 Saccharomyces cerevisiae YNL250w RAD50 DNA repair protein, similar to Saccharomyces cerevisiae RAD50 (YNL250W); ancestral locus Anc_1.110
YALI1_D18577g	Compare to YALI0D15268g, similar to uniprot|P53852 Saccharomyces cerevisiae YNL247w cysteinyl-tRNA synthetase, similar to Saccharomyces cerevisiae YNL247W; ancestral locus Anc_1.115
YALI1_D18623g	Truncated form of YALI0D15304g, weakly similar to uniprot|P32521 Saccharomyces cerevisiae YIR006c PAN1 actin-cytoskeleton assembly protein
YALI1_D18646g	Truncated form of YALI0D15304g, weakly similar to uniprot|P32521 Saccharomyces cerevisiae YIR006c PAN1 actin-cytoskeleton assembly protein, similar to Saccharomyces cerevisiae PAN1 (YIR006C); ancestral locus Anc_7.160
YALI1_D18673g	Compare to YALI0D15312g, highly similar to uniprot|O74196 Colletotrichum gloeosporioides Ubiquitin-conjugating enzyme E2-16 kDa (Ubiquitin- protein ligase)
YALI1_D18727g	Compare to YALI0D15334g, some similarities with uniprot|Q9UUD1 Schizosaccharomyces pombe Putative DNA-binding protein
YALI1_D18770g	Compare to YALI0D15356g, similar to uniprot|Q12176 Saccharomyces cerevisiae YDR060w MAK21 protein required for 60S ribosomal subunit biogenesis, similar to Saccharomyces cerevisiae MAK21 (YDR060W); ancestral locus Anc_3.309
YALI1_D18833g	Compare to YALI0D15378g, some similarities with uniprot|Q10951 Schizosaccharomyces pombe Byr4 protein mitosis inhibitor
YALI1_D18845g	Compare to YALI0D15400g, similar to Saccharomyces cerevisiae BIO2 (YGR286C), similar to uniprot|P32451 Saccharomyces cerevisiae YGR286c BIO2 biotin synthetase
YALI1_D18890g	Compare to YALI0D15422g, similar to Saccharomyces cerevisiae AGP2 (YBR132C); ancestral locus Anc_3.397, similar to uniprot|P15380 Saccharomyces cerevisiae YOR348c PUT4 proline and gamma-aminobutyrate permease
YALI1_D18943g	Compare to YALI0D15444g, similar to Saccharomyces cerevisiae HUL4 (YJR036C); ancestral locus Anc_1.462, weakly similar to uniprot|P40985 Saccharomyces cerevisiae YJR036c HUL4 hect domain E3 ubiquitin-protein ligase
YALI1_D18982g	Compare to YALI0D15466g, no similarity
YALI1_D19008g	Compare to YALI0D15488g, weakly similar to uniprot|O14091 Schizosaccharomyces pombe General alpha-glucoside permease
YALI1_D19018g	Compare to YALI0D15510g, weakly similar to uniprot|Q06651 Saccharomyces cerevisiae YDR313c PIB1 phosphatidylinositol(3)-phosphate binding protein
YALI1_D19039g	Compare to YALI0D15532g, similar to uniprot|Q9US35 Schizosaccharomyces pombe Hypothetical 45.6 kDa protein
YALI1_D19058g	Compare to YALI0D15554g, some similarities with uniprot|P87132 Schizosaccharomyces pombe Hypothetical protein
YALI1_D19087g	Compare to YALI0D15576g, similar to uniprot|Q8WZZ7 Neurospora crassa B24G3. 040 Conserved hypothetical protein, similar to Saccharomyces cerevisiae IES2 (YNL215W); ancestral locus Anc_2.31
YALI1_D19108g	Compare to YALI0D15598g, similar to uniprot|P32356 Saccharomyces cerevisiae YDR001c NTH1 neutral trehalase, similar to Saccharomyces cerevisiae NTH2 (YBR001C) and NTH1 (YDR001C); ancestral locus Anc_3.205
YALI1_D19110g	Compare to YALI0D15620g, similar to uniprot|P78600 Candida albicans Prolyl- tRNA synthetase cytoplasmic, similar to Saccharomyces cerevisiae YER087W; ancestral locus Anc_7.368
YALI1_D19134g	Compare to YALI0D15642g, similar to uniprot|Q12496 Saccharomyces cerevisiae YOL098c, similar to Saccharomyces cerevisiae YOL098C; ancestral locus Anc_3.93
YALI1_D19187g	Compare to YALI0D15664g, weakly similar to uniprot|P38867 Saccharomyces cerevisiae YHR177w
YALI1_D19228g	Compare to YALI0D15686g, no similarity
YALI1_D19252g	Compare to YALI0D15708g, similar to uniprot|P45954 Homo sapiens Acyl-CoA dehydrogenase short/branched chain specific mitochondrial precursor
YALI1_D19306g	Truncated form of YALI0D15752g, similar to Saccharomyces cerevisiae PIN4 (YBL051C); ancestral locus Anc_7.370, some similarities with uniprot|P34217 Saccharomyces cerevisiae YBL051c
YALI1_D19321g	Compare to YALI0D15774g, weakly similar to uniprot|P47158 Saccharomyces cerevisiae YJR122w CAF17 CCR4 associated factor, similar to Saccharomyces cerevisiae CAF17 (YJR122W); ancestral locus Anc_7.508
YALI1_D19338g	Compare to YALI0D15796g, some similarities with uniprot|P32380 Saccharomyces cerevisiae YDR356w NUF1 spindle pole body component
YALI1_D19354g	Compare to YALI0D15818g, similar to Saccharomyces cerevisiae YCR087C-A; ancestral locus Anc_6.365, similar to DEHA0A13882g Debaryomyces hansenii IPF 7391.1 putative DNA-binding ptotein
YALI1_D19365g	Compare to YALI0D15840g, weakly similar to uniprot|P20676 Saccharomyces cerevisiae YOR098c NUP1 nuclear pore protein, similar to Saccharomyces cerevisiae NUP1 (YOR098C); ancestral locus Anc_2.186
YALI1_D19515g	Compare to YALI0D15862g, weakly similar to uniprot|P40317 Saccharomyces cerevisiae YDR006c SOK1 high copy suppressor of a cyclic AMP-dependent protein kinase, similar to Saccharomyces cerevisiae SOK1 (YDR006C); ancestral locus Anc_3.195
YALI1_D19623g	Compare to YALI0D15906g, similar to uniprot|Q9P8F7 Yarrowia lipolytica Triacylglycerol lipase precursor
YALI1_D19721g	Compare to YALI0D15928g, some similarities with uniprot|P53857 Saccharomyces cerevisiae YNL234w
YALI1_D19775g	Compare to YALI0D15972g, weakly similar to uniprot|P39980 Saccharomyces cerevisiae YEL065w SIT1 probable multidrug resistance protein
YALI1_D19951g	Compare to YALI0D16137g, similar to uniprot|P50276 Saccharomyces cerevisiae YGR055w MUP1 high affinity methionine permease
YALI1_D19971g	Compare to YALI0D16159g, weakly similar to uniprot|Q9T8U6 Liolaemus zapallarensis NADH dehydrogenase subunit 2
YALI1_D19980g	Compare to YALI0D16181g, no similarity
YALI1_D20007g	Compare to YALI0D16203g, similar to uniprot|Q871Q7 Neurospora crassa NCU06710.1 related to cleft lip and palate transmembrane protein 1 (CLPTM1)
YALI1_D20018g	Compare to YALI0D16225g, weakly similar to uniprot|P39682 Saccharomyces cerevisiae YML046w PRP39 pre-mRNA splicing factor
YALI1_D20050g	Compare to YALI0D16247g, similar to uniprot|P40952 Kluyveromyces lactis NADPH dehydrogenase 1 OYE2 NADPH dehydrogenase (old yellow enzyme) isoform 1
YALI1_D20061g	Compare to YALI0D16269g, weakly similar to uniprot|Q03266 Saccharomyces cerevisiae YMR289w, similar to Saccharomyces cerevisiae YMR289W; ancestral locus Anc_5.44
YALI1_D20118g	Compare to YALI0D16291g, similar to uniprot|P53893 Saccharomyces cerevisiae YNL163c translation elongation factor eEF4
YALI1_D20164g	Compare to YALI0D16313g, similar to Saccharomyces cerevisiae SGD1 (YLR336C); ancestral locus Anc_4.165, weakly similar to uniprot|Q06132 Saccharomyces cerevisiae YLR336c SGD1 involved in HOG pathway
YALI1_D20202g	Compare to YALI0D16335g, similar to uniprot|P50101 Saccharomyces cerevisiae YMR304w UBP15
YALI1_D20222g	Compare to YALI0D16357g, uniprot|P59680 Yarrowia lipolytica 6- phosphofructokinase
YALI1_D20257g	Compare to YALI0D16379g, some similarities with uniprot|O14115 Schizosaccharomyces pombe Hypothetical protein
YALI1_D20304g	Truncated form of YALI0D16401g, similar to Saccharomyces cerevisiae RAD23 (YEL037C); ancestral locus Anc_1.480, similar to uniprot|O74803 Schizosaccharomyces pombe UV excision repair protein rhp23 (RAD23 homolog)
YALI1_D20329g	Compare to YALI0D16423g, similar to Saccharomyces cerevisiae YDR476C; ancestral locus Anc_5.610, some similarities with uniprot|Q03362 Saccharomyces cerevisiae YDR476c hypothetical protein
YALI1_D20359g	Compare to YALI0D16445g, similar to Saccharomyces cerevisiae YOR283W; ancestral locus Anc_8.745, weakly similar to uniprot|O94461 Schizosaccharomyces pombe Putative phosphoglycerate mutase
YALI1_D20381g	Compare to YALI0D16467g, weakly similar to uniprot|P29547 Saccharomyces cerevisiae YPL048w CAM1 translation elongation factor eEF1 gamma
YALI1_D20413g	Compare to YALI0D16489g, similar to uniprot|Q6C702 Yarrowia lipolytica YALI0E04851g
YALI1_D20457g	Compare to YALI0D16599g, no similarity
YALI1_D20473g	Compare to YALI0D16643g, similar to Saccharomyces cerevisiae FRS2 (YFL022C); ancestral locus Anc_8.52, similar to uniprot|P15625 Saccharomyces cerevisiae YFL022c FRS2 phenylalanine--tRNA ligase beta chain cytosolic
YALI1_D20651g	Compare to YALI0D16687g, weakly similar to uniprot|Q9FY91 Arabidopsis thaliana SIR2-family protein
YALI1_D20662g	Compare to YALI0D16709g, similar to Saccharomyces cerevisiae SRX1 (YKL086W); ancestral locus Anc_2.642, similar to uniprot|P36077 Saccharomyces cerevisiae YKL086w
YALI1_D20676g	Compare to YALI0D16753g, highly similar to uniprot|Q8TG27 Talaromyces emersonii Malate dehydrogenase precursor mitochondrial, similar to Saccharomyces cerevisiae MDH1 (YKL085W); ancestral locus Anc_2.641
YALI1_D20695g	Compare to YALI0D16775g, similar to uniprot|P38884 Saccharomyces cerevisiae YHR198c
YALI1_D20706g	Compare to YALI0D16797g, similar to Saccharomyces cerevisiae UTR4 (YEL038W); ancestral locus Anc_1.481, similar to uniprot|P32626 Saccharomyces cerevisiae YEL038w UTR4 putative enolase-phosphatase E-1
YALI1_D20719g	Compare to YALI0D16819g, no similarity
YALI1_D20758g	Compare to YALI0D16841g, similar to Saccharomyces cerevisiae MET18 (YIL128W); ancestral locus Anc_2.233, weakly similar to uniprot|P40469 Saccharomyces cerevisiae YIL128w MET18 involved in NER repair and RNA polymerase II transcription
YALI1_D20768g	Compare to YALI0D16863g, uniprot|Q92390 Yarrowia lipolytica caseine kinase II catalytic subunit
YALI1_D20840g	Compare to YALI0D16885g, similar to Saccharomyces cerevisiae APC1 (YNL172W); ancestral locus Anc_2.82, weakly similar to uniprot|P53886 Saccharomyces cerevisiae YNL172w APC1 subunit of anaphase-promoting complex (cyclosome)
YALI1_D20844g	Compare to YALI0D16907g, weakly similar to DEHA0E16291g Debaryomyces hansenii IPF 11633.1
YALI1_D20885g	Compare to YALI0D16929g, similar to Saccharomyces cerevisiae RSM22 (YKL155C); ancestral locus Anc_5.264, weakly similar to uniprot|P36056 Saccharomyces cerevisiae YKL155c CAP1 putative cytochrome c oxidase
YALI1_D20886g	Compare to YALI0D16940g, similar to uniprot|Q99369 Saccharomyces cerevisiae YOR280c Hypothetical dihydrofolate reductase
YALI1_D20904g	Compare to YALI0D16962g, no similarity
YALI1_D20931g	Compare to YALI0D16984g, some similarities with uniprot|Q9H2G0 Homo sapiens CTCL tumor antigen se37-2
YALI1_D20954g	Compare to YALI0D17006g, similar to Saccharomyces cerevisiae CHS7 (YHR142W); ancestral locus Anc_2.94, similar to uniprot|P38843 Saccharomyces cerevisiae YHR142w CHS7 control of protein export from the ER (like chitin synthase III)
YALI1_D20985g	Compare to YALI0D17028g, similar to Saccharomyces cerevisiae ALG6 (YOR002W); ancestral locus Anc_6.22, similar to uniprot|Q12001 Saccharomyces cerevisiae YOR002w ALG6 glucosyltransferase
YALI1_D21022g	Compare to YALI0D17050g, similar to uniprot|Q9C452 Penicillium paxilli Geranylgeranyl pyrophosphate synthase BTS1 homologue, similar to Saccharomyces cerevisiae BTS1 (YPL069C); ancestral locus Anc_8.536
YALI1_D21023g	Compare to YALI0D17072g, similar to uniprot|Q06549 Saccharomyces cerevisiae YLR245c CDD1 cytidine deaminase, similar to Saccharomyces cerevisiae CDD1 (YLR245C); ancestral locus Anc_8.391
YALI1_D21031g	Compare to YALI0D17086g, similar to Saccharomyces cerevisiae YKE2 (YLR200W); ancestral locus Anc_7.352, similar to uniprot|P52553 Saccharomyces cerevisiae YLR200w YKE2 Gim complex component
YALI1_D21044g	Compare to YALI0D17094g, weakly similar to Q6BIW6 Debaryomyces hansenii DEHA1G03729g, unknown function
YALI1_D21076g	Compare to YALI0D17116g, highly similar to uniprot|Q12460 Saccharomyces cerevisiae YLR197w SIK1 involved in pre-rRNA processing, similar to Saccharomyces cerevisiae SIK1 (YLR197W); ancestral locus Anc_7.354
YALI1_D21100g	Compare to YALI0D17138g, similar to uniprot|Q01662 Saccharomyces cerevisiae YLR244c MAP1 methionine aminopeptidase isoform 1, similar to Saccharomyces cerevisiae MAP1 (YLR244C); ancestral locus Anc_8.392
YALI1_D21120g	Compare to YALI0D17160g, similar to Saccharomyces cerevisiae YER080W; ancestral locus Anc_7.271, similar to uniprot|P40053 Saccharomyces cerevisiae YER080w
YALI1_D21145g	Compare to YALI0D17182g, weakly similar to uniprot|P47044 Saccharomyces cerevisiae YJL055w, similar to Saccharomyces cerevisiae YJL055W; ancestral locus Anc_1.327
YALI1_D21167g	Compare to YALI0D17204g, highly similar to uniprot|Q01939 Saccharomyces cerevisiae YGL048c SUG1 26S proteasome regulatory subunit
YALI1_D21173g	Compare to YALI0D17226g, similar to uniprot|Q873E9 Neurospora crassa NCU05547.1 predicted protein
YALI1_D21191g	Compare to YALI0D17248g, no similarity
YALI1_D21228g	Compare to YALI0D17270g, weakly similar to uniprot|Q12303 Saccharomyces cerevisiae YLR121c YPS3 GPI-anchored aspartyl protease
YALI1_D21256g	Compare to YALI0D17292g, no similarity
YALI1_D21327g	Compare to YALI0D17314g, weakly similar to uniprot|Q9K3W1 Streptomyces coelicolor 4-coumarate:CoA ligase
YALI1_D21373g	Converted to coding from non-coding YALI0D17336g, uniprot|Q8NIP3 Yarrowia lipolytica Reverse transcriptase relics
YALI1_D21385g	Compare to YALI0D17380g, similar to uniprot|P63622 Neisseria meningitidis Putative arsenate reductase
YALI1_D21408g	Compare to YALI0D17402g, similar to uniprot|Q86ZL4 Podospora anserina putative cystathionine gamma-synthase, similar to Saccharomyces cerevisiae STR2 (YJR130C) and YML082W; ancestral locus Anc_4.354
YALI1_D21424g	Compare to YALI0D17424g, similar to uniprot|P32906 Saccharomyces cerevisiae YJR131w MNS1 ER alpha1 2-mannosidase, similar to Saccharomyces cerevisiae MNS1 (YJR131W); ancestral locus Anc_4.355
YALI1_D21458g	Compare to YALI0D17446g, similar to uniprot|O74916 Schizosaccharomyces pombe Putative acetylornithine deacetylase
YALI1_D21464g	Compare to YALI0D17468g, similar to DEHA0F07777g Debaryomyces hansenii IPF 8508.1, similar to Saccharomyces cerevisiae YCR015C; ancestral locus Anc_1.430
YALI1_D21501g	Compare to YALI0D17512g, similar to uniprot|Q6CH08 Yarrowia lipolytica YALI0A14322g
YALI1_D21511g	Compare to YALI0D17534g, similar to Saccharomyces cerevisiae TGL3 (YMR313C); ancestral locus Anc_5.2, similar to DEHA0G23430g Debaryomyces hansenii IPF 4879.1
YALI1_D21543g	Compare to YALI0D17556g, similar to uniprot|Q03175 Saccharomyces cerevisiae YMR101c SRT1 cis-prenyltransferase homologue
YALI1_D21553g	Compare to YALI0D17578g, similar to uniprot|Q9HDU7 Schizosaccharomyces pombe Hypothetical 25.1 kDa
YALI1_D21565g	Compare to YALI0D17600g, similar to uniprot|O94282 Schizosaccharomyces pombe, similar to Saccharomyces cerevisiae NCS6 (YGL211W); ancestral locus Anc_3.524
YALI1_D21586g	Compare to YALI0D17622g, weakly similar to uniprot|P37610 Escherichia coli Alpha- ketoglutarate-dependent taurine dioxygenase
YALI1_D21599g	Compare to YALI0D17644g, no similarity
YALI1_D21610g	Compare to YALI0D17666g, weakly similar to uniprot|O08654 Rattus norvegicus UPF0183 protein
YALI1_D21631g	Compare to YALI0D17688g, similar to uniprot|P32837 Saccharomyces cerevisiae YDL210w UGA4 GABA-specific high-affinity permease
YALI1_D21667g	Compare to YALI0D17710g, weakly similar to DEHA0E04532g Debaryomyces hansenii IPF 5485.1
YALI1_D21702g	Compare to YALI0D17732g, similar to Saccharomyces cerevisiae GCN1 (YGL195W); ancestral locus Anc_8.155, similar to uniprot|P33892 Saccharomyces cerevisiae YGL195w GCN1 translational activator
YALI1_D21830g	Compare to YALI0D17754g, weakly similar to uniprot|Q9P4F1 Aspergillus parasiticus Monooxigenase
YALI1_D21847g	Compare to YALI0D17776g, similar to Saccharomyces cerevisiae APM3 (YBR288C); ancestral locus Anc_2.522, similar to uniprot|P38153 Saccharomyces cerevisiae YBR288c APM3 AP-3 Adaptin complex subunit mu3 subunit
YALI1_D21851t	Partial Line element
YALI1_D21857t	Partial Line element
YALI1_D21986g	Compare to YALI0D17798g, no similarity
YALI1_D22044g	Truncated form of YALI0D17820g, no similarity
YALI1_D22053g	Truncated form of YALI0D17820g, no similarity
YALI1_D22083g	Compare to YALI0D17842g, weakly similar to uniprot|P53264 Saccharomyces cerevisiae YGR110w
YALI1_D22124g	Compare to YALI0D17864g, similar to uniprot|P30624 Saccharomyces cerevisiae YOR317w FAA1 long-chain-fatty-acid--CoA ligase
YALI1_D22157g	Compare to YALI0D17886g, some similarities with uniprot|Q9UTK4 Schizosaccharomyces pombe Nucleoporin nup189 (Nuclear pore protein nup189)
YALI1_D22237g	Compare to YALI0D17930g, highly similar to uniprot|P28777 Saccharomyces cerevisiae YGL148w ARO2 chorismate synthase, similar to Saccharomyces cerevisiae ARO2 (YGL148W); ancestral locus Anc_2.318
YALI1_D22247g	Compare to YALI0D17952g, weakly similar to uniprot|P36057 Saccharomyces cerevisiae YKL154w SRP102 signal recognition particle receptor beta chain, similar to Saccharomyces cerevisiae SRP102 (YKL154W); ancestral locus Anc_5.263
YALI1_D22274g	Compare to YALI0D17974g, weakly similar to uniprot|P53389 Saccharomyces cerevisiae YNR055c HOL1 member of major facilitator superfamily multidrug-resistance
YALI1_D22313g	Compare to YALI0D17988g, weakly similar to uniprot|Q7SHK8 Neurospora crassa NCU02896.1 hypothetical protein hyothetical start
YALI1_D22342g	Compare to YALI0D17996g, some similarities with uniprot|Q03435 Saccharomyces cerevisiae YDL002c NHP10 Non-histone protein, similar to Saccharomyces cerevisiae NHP10 (YDL002C); ancestral locus Anc_3.210
YALI1_D22368g	Compare to YALI0D18018g, similar to Saccharomyces cerevisiae SST2 (YLR452C); ancestral locus Anc_7.514, weakly similar to uniprot|P11972 Saccharomyces cerevisiae YLR452c SST2 involved in desensitization to alpha-factor pheromone
YALI1_D22401g	Compare to YALI0D18040g, no similarity
YALI1_D22413g	Compare to YALI0D18062g, similar to Saccharomyces cerevisiae HUA1 (YGR268C); ancestral locus Anc_5.36, some similarities with uniprot|P40325 Saccharomyces cerevisiae YGR268C Hypothetical 22.4 kDa protein in FOL2- YTA7 intergenic region
YALI1_D22568g	Compare to YALI0D18084g, some similarities with uniprot|P40059 Saccharomyces cerevisiae YER088c DOT6 involved in derepression of telomeric silencing
YALI1_D22636g	Compare to YALI0D18106g, similar to CA5008|IPF12577 Candida albicans IPF12577 unknown function
YALI1_D22663g	Compare to YALI0D18128g, no similarity
YALI1_D22704g	Compare to YALI0D18150g, weakly similar to uniprot|P36516 Saccharomyces cerevisiae YMR024w MRPL3 ribosomal protein of the large subunit mitochondrial, similar to Saccharomyces cerevisiae MRPL3 (YMR024W); ancestral locus Anc_2.574
YALI1_D22759g	Compare to YALI0D18194g, weakly similar to uniprot|Q8W1E7 Arabidopsis thaliana AT4g15420/dl3755w (ubiquitin fusion degradation protein UFD1 like protein)
YALI1_D22768g	Converted to coding from non-coding YALI0D18216g, similar to uniprot|P07884 Saccharomyces cerevisiae YOR274w MOD5 tRNA isopentenyltransferase, similar to Saccharomyces cerevisiae MOD5 (YOR274W); ancestral locus Anc_8.725
YALI1_D22804g	Compare to YALI0D18249g, some similarities with uniprot|Q8WZS2 Neurospora crassa Dynactin (150 kDa dynein-associated polypeptide) ro- 3
YALI1_D22834g	Compare to YALI0D18271g, similar to uniprot|P13259 Saccharomyces cerevisiae YGR202c PCT1 cholinephosphate cytidylyltransferase, similar to Saccharomyces cerevisiae PCT1 (YGR202C); ancestral locus Anc_5.137
YALI1_D22864g	Compare to YALI0D18293g, similar to Saccharomyces cerevisiae YGR203W; ancestral locus Anc_5.136, weakly similar to uniprot|Q06597 Saccharomyces cerevisiae YPR200c ARR2 arsenate reductase
YALI1_D22888g	Compare to YALI0D18315g, no similarity
YALI1_D22906g	Compare to YALI0D18337g, similar to uniprot|P25335 Saccharomyces cerevisiae YIR029w DAL2 allantoinase, similar to Saccharomyces cerevisiae DAL2 (YIR029W)
YALI1_D22961g	Compare to YALI0D18359g, weakly similar to uniprot|Q8CE47 Mus musculus Hypothetical protein
YALI1_D22997g	Compare to YALI0D18381g, similar to uniprot|Q8TGI8 Talaromyces emersonii Beta- glucosidase
YALI1_D23067g	Compare to YALI0D18403g, similar to Saccharomyces cerevisiae ATG26 (YLR189C); ancestral locus Anc_1.69, similar to uniprot|Q06321 Saccharomyces cerevisiae YLR189c UGT51 sterol glucosyltransferase (UDP- glucose:sterol glucosyltransferase)
YALI1_D23094g	Compare to YALI0D18436g, no similarity
YALI1_D23128g	Compare to YALI0D18458g, similar to uniprot|P40015 Saccharomyces cerevisiae YER019w ISC1 Inositol phosphosphingolipids phospholipase C, similar to Saccharomyces cerevisiae ISC1 (YER019W); ancestral locus Anc_1.70
YALI1_D23142g	Compare to YALI0D18480g, similar to uniprot|Q872L4 Yarrowia lipolytica Lipase (EC 3.1.1.3)
YALI1_D23169g	Compare to YALI0D18502g, no similarity
YALI1_D23224g	Compare to YALI0D18546g, similar to Saccharomyces cerevisiae YOR352W; ancestral locus Anc_7.40, weakly similar to KLLA0C13167g Kluyveromyces lactis IPF 5955.1
YALI1_D23237g	Compare to YALI0D18568g, similar to uniprot|Q9URL7 Candida albicans Peptide transport protein caPTR2
YALI1_D23265g	Compare to YALI0D18590g, some similarities with uniprot|P50110 Saccharomyces cerevisiae YMR060c TOM37 mitochondrial outer membrane import receptor subunit, similar to Saccharomyces cerevisiae SAM37 (YMR060C); ancestral locus Anc_2.626
YALI1_D23274g	Compare to YALI0D18612g, weakly similar to uniprot|P25298 Saccharomyces cerevisiae YMR061w RNA14 component of pre-mRNA 3, similar to Saccharomyces cerevisiae RNA14 (YMR061W); ancestral locus Anc_2.627
YALI1_D23337g	Truncated form of YALI0D18634g, no similarity
YALI1_D23377g	Compare to YALI0D18656g, similar to uniprot|Q6CI22 Yarrowia lipolytica YALI0A02387g
YALI1_D23479g	Compare to YALI0D18678g, weakly similar to uniprot|P46974 Saccharomyces cerevisiae YJR127c ZMS1 transcription factor with similarity to regulatory protein ARD1P P3.74.f3.1
YALI1_D23575g	Compare to YALI0D18700g, similar to Saccharomyces cerevisiae LAS1 (YKR063C); ancestral locus Anc_1.200, some similarities with uniprot|P36146 Saccharomyces cerevisiae YKR063c LAS1 involved in cell morphogenesis cytoskeletal regulation and bud formation singleton
YALI1_D23622g	Compare to YALI0D18722g, similar to uniprot|P40388 Schizosaccharomyces pombe UV- induced protein uvi15
YALI1_D23653g	Compare to YALI0D18744g, similar to uniprot|Q96VH5 Saccharomyces cerevisiae YCL057C-A Hypothetical 10.4 kDa protein, similar to Saccharomyces cerevisiae YCL057C-A; ancestral locus Anc_1.8
YALI1_D23688g	Compare to YALI0D18766g, some similarities with uniprot|P10849 Saccharomyces cerevisiae YDL044C NAM1 protein mitochondrial precursor (Mitochondrial transcription factor 2)
YALI1_D23693g	Compare to YALI0D18788g, similar to DEHA0G14795g Debaryomyces hansenii IPF 4001.1, similar to Saccharomyces cerevisiae YBL104C; ancestral locus Anc_7.440
YALI1_D23730g	Compare to YALI0D18810g, no similarity
YALI1_D23753g	Compare to YALI0D18832g, similar to uniprot|Q6CDB7 Yarrowia lipolytica YALI0C01925g
YALI1_D23785g	Compare to YALI0D18854g, similar to uniprot|P35200 Saccharomyces cerevisiae YLR168C MSF1 protein
YALI1_D23845t	Full length Line element
YALI1_D23866t	Compare to YALI0D26433g:3, Full length Line element, uniprot|Q8NIP4 Yarrowia lipolytica gag-like protein
YALI1_D23885g	Compare to YALI0D18876g, similar to uniprot|P32467 Saccharomyces cerevisiae YHR092c HXT4 moderate to low-affinity glucose transporter P33.1.f24.1
YALI1_D23934g	Compare to YALI0D18898g, similar to Saccharomyces cerevisiae PXL1 (YKR090W); ancestral locus Anc_5.691, some similarities with uniprot|P36166 Saccharomyces cerevisiae YKR090w related to chicken Lim protein kinase and Islet proteins
YALI1_D23995g	Compare to YALI0D18920g, weakly similar to uniprot|P28272 Saccharomyces cerevisiae YKL216w URA1 dihydroorotate dehydrogenase
YALI1_D24026g	Compare to YALI0D18942g, similar to uniprot|P36164 Saccharomyces cerevisiae YKR088c, similar to Saccharomyces cerevisiae TVP38 (YKR088C); ancestral locus Anc_5.686
YALI1_D24054g	Compare to YALI0D18964g, similar to uniprot|P87218 Candida albicans Sorbitol utilization protein SOU2
YALI1_D24069g	Compare to YALI0D18986g, no similarity
YALI1_D24095g	Compare to YALI0D19008g, similar to DEHA0E06105g Debaryomyces hansenii IPF 5370.1, similar to Saccharomyces cerevisiae ATX2 (YOR079C); ancestral locus Anc_5.688
YALI1_D24109g	Compare to YALI0D19030g, weakly similar to uniprot|Q7RWU3 Neurospora crassa NADH-ubiquinone oxidoreductase
YALI1_D24127g	Compare to YALI0D19052g, no similarity
YALI1_D24138g	Compare to YALI0D19074g, no similarity
YALI1_D24182g	Truncated form of YALI0D19096g, similar to uniprot|P38163 Saccharomyces cerevisiae YBL106c SRO77 polarized exocytosis by regulating SNARE function P2.26.f2.1, similar to Saccharomyces cerevisiae SRO77 (YBL106C) and SRO7 (YPR032W); ancestral locus Anc_7.442
YALI1_D24225g	Compare to YALI0D19118g, similar to DEHA0G04917g Debaryomyces hansenii IPF 692.1, similar to Saccharomyces cerevisiae YOR006C; ancestral locus Anc_6.19
YALI1_D24249g	Compare to YALI0D19140g, similar to uniprot|P30952 Saccharomyces cerevisiae YNL117w Malate synthase 1 glyoxysomal (EC 4.1.3.2)
YALI1_D24308g	Compare to YALI0D19162g, uniprot|Q9UVF5 Yarrowia lipolytica Pal3 protein involved in ambient pH sensing mating and meiosis, similar to Saccharomyces cerevisiae RIM8 (YGL045W); ancestral locus Anc_4.62
YALI1_D24333g	Compare to YALI0D19184g, uniprot|Q872L4 Yarrowia lipolytica Lipase (EC 3.1.1. 3)
YALI1_D24361g	Compare to YALI0D19206g, similar to Saccharomyces cerevisiae ERG4 (YGL012W); ancestral locus Anc_4.112, similar to uniprot|P36209 Schizosaccharomyces pombe Delta(24(24(1)))-sterol reductase ERG4 homologue
YALI1_D24375g	Compare to YALI0D19228g, no similarity
YALI1_D24387g	Compare to YALI0D19250g, similar to Saccharomyces cerevisiae YER128W; ancestral locus Anc_8.139, weakly similar to uniprot|Q9C0V9 Schizosaccharomyces pombe Hypothetical 21.4 kDa protein
YALI1_D24398g	Compare to YALI0D19272g, weakly similar to uniprot|Q09710 Schizosaccharomyces pombe Hypothetical protein C18B11.03c in chromosome I
YALI1_D24425g	Compare to YALI0D19294g, no similarity
YALI1_D24508g	Compare to YALI0D19316g, no similarity
YALI1_D24546g	Compare to YALI0D19338g, no similarity
YALI1_D24580g	Compare to YALI0D19360g, similar to uniprot|Q6C013 Yarrowia lipolytica YALI0F28633g
YALI1_D24626g	Compare to YALI0D19382g, weakly similar to DEHA-IPF8500.1 Debaryomyces hansenii DEHA0F07909g, similar to Saccharomyces cerevisiae YCR016W; ancestral locus Anc_1.431
YALI1_D24649g	Compare to YALI0D19426g, similar to Saccharomyces cerevisiae YGR277C; ancestral locus Anc_5.17, weakly similar to uniprot|P53332 Saccharomyces cerevisiae YGR277c Hypothetical 34.3 kDa protein in TAF145- YOR1 intergenic region
YALI1_D24687g	Compare to YALI0D19448g, similar to Saccharomyces cerevisiae RPC37 (YKR025W); ancestral locus Anc_1.262, weakly similar to uniprot|P36121 Saccharomyces cerevisiae YKR025w RPC37 Pol III transcription singleton
YALI1_D24718g	Compare to YALI0D19470g, similar to Saccharomyces cerevisiae BCK1 (YJL095W); ancestral locus Anc_1.271, similar to uniprot|Q871H9 Neurospora crassa B16M17. 090 Related to Ste20-like kinase Don3
YALI1_D24745g	Compare to YALI0D19492g, similar to wi|NCU07880.1 Neurospora crassa NCU07880. 1 Cell division control protein 2 homolog CDC2
YALI1_D24751g	Compare to YALI0D19514g, similar to uniprot|P87149 Schizosaccharomyces pombe Putative mitochondrial RNA splicing protein
YALI1_D24770g	Compare to YALI0D19536g, weakly similar to uniprot|Q802V5 Brachydanio rerio Similar to TBP-interacting protein
YALI1_D24836g	Compare to YALI0D19558g, similar to uniprot|P32901 Saccharomyces cerevisiae YKR093W Peptide transporter PTR2 (Peptide permease PTR2), similar to Saccharomyces cerevisiae PTR2 (YKR093W); ancestral locus Anc_5.698
YALI1_D24892g	Compare to YALI0D19580g, weakly similar to uniprot|P32901 Saccharomyces cerevisiae YKR093W Peptide transporter PTR2 (Peptide permease PTR2)
YALI1_D24918g	Compare to YALI0D19602g, similar to DEHA0E01276g Debaryomyces hansenii IPF 5727.1
YALI1_D24941g	Compare to YALI0D19624g, similar to Saccharomyces cerevisiae LOC1 (YFR001W); ancestral locus Anc_8.91, similar to uniprot|P43586 Saccharomyces cerevisiae YFR001w LOC1 related to rabbit triadin SPP41P
YALI1_D24961g	Compare to YALI0D19646g, similar to uniprot|P50276 Saccharomyces cerevisiae YGR055W High-affinity methionine permease
YALI1_D24997g	Compare to YALI0D19734g, similar to DEHA0D15510g Debaryomyces hansenii IPF 3004.1
YALI1_D25037g	Compare to YALI0D19756g, weakly similar to uniprot|O14035 Schizosaccharomyces pombe NCS1 uracil transporter
YALI1_D25104g	Compare to YALI0D19778g, weakly similar to uniprot|Q96U77 Neurospora crassa Conserved hypothetical protein
YALI1_D25137g	Compare to YALI0D19822g, similar to Saccharomyces cerevisiae BUD27 (YFL023W); ancestral locus Anc_8.48, no similarity
YALI1_D25151g	Compare to YALI0D19844g, similar to Saccharomyces cerevisiae RBL2 (YOR265W); ancestral locus Anc_8.714, weakly similar to uniprot|P48606 Saccharomyces cerevisiae YOR265W Tubulin-specific chaperone A (Tubulin- folding cofactor A) (CFA)
YALI1_D25178g	Compare to YALI0D19866g, similar to CAGL0I08613g Candida glabrata,ancestral locus Anc_8.218
YALI1_D25208g	Compare to YALI0D19888g, similar to KLLA0C09504g Kluyveromyces lactis IPF 6178.1, similar to Saccharomyces cerevisiae YOR262W; ancestral locus Anc_8.712
YALI1_D25216g	Compare to YALI0D19910g, similar to uniprot|Q08723 Saccharomyces cerevisiae YOR261c RPN8 26S proteasome regulatory subunit, similar to Saccharomyces cerevisiae RPN8 (YOR261C); ancestral locus Anc_8.711
YALI1_D25233g	Compare to YALI0D19932g, some similarities with DEHA0F11814g Debaryomyces hansenii IPF 8200.1
YALI1_D25250g	Compare to YALI0D19954g, similar to DEHA0F11836g Debaryomyces hansenii, similar to Saccharomyces cerevisiae TMA16 (YOR252W); ancestral locus Anc_8.695
YALI1_D25255g	Compare to YALI0D19976g, no similarity
YALI1_D25288g	Compare to YALI0D19998g, similar to uniprot|Q6CI45 Yarrowia lipolytica YALI0A01848g
YALI1_D25289g	Compare to YALI0D20020g, similar to Saccharomyces cerevisiae YDR282C; ancestral locus Anc_5.291, similar to uniprot|Q05648 Saccharomyces cerevisiae YDR282C
YALI1_D25330g	Compare to YALI0D20042g, similar to Saccharomyces cerevisiae EFR3 (YMR212C); ancestral locus Anc_8.727, weakly similar to uniprot|Q03653 Saccharomyces cerevisiae YMR212c EFR3 weak similarity to myosins conserved ubiquitous membrane protein required for cell viability singleton
YALI1_D25359g	Compare to YALI0D20064g, weakly similar to uniprot|O94343 Schizosaccharomyces pombe Putative MSF transporter
YALI1_D25370g	Compare to YALI0D20086g, similar to Saccharomyces cerevisiae CEF1 (YMR213W); ancestral locus Anc_8.728, similar to uniprot|P39964 Schizosaccharomyces pombe Cell division control protein 5
YALI1_D25400g	Compare to YALI0D20108g, similar to uniprot|P36035 Saccharomyces cerevisiae YKL217w JEN1 carboxylic acid transporter protein singleton
YALI1_D25419g	Compare to YALI0D20130g, similar to Saccharomyces cerevisiae RIM20 (YOR275C); ancestral locus Anc_8.726, uniprot|Q8WZL4 Yarrowia lipolytica Rim20 protein involved in ambient pH sensing
YALI1_D25450g	Compare to YALI0D20152g, similar to Saccharomyces cerevisiae GNA1 (YFL017C); ancestral locus Anc_8.58, similar to uniprot|O93806 Candida albicans Glucosamine 6- phosphate N-acetyltransferase (EC 2.3.1.4) (Phosphoglucosamine transacetylase) (Phosphoglucosamine acetylase)
YALI1_D25472g	Compare to YALI0D20174g, similar to uniprot|Q9HF84 Emericella nidulans Class I alpha-mannosidase 1A (EC 3.2.1.113)
YALI1_D25529g	Compare to YALI0D20196g, weakly similar to uniprot|P38358 Saccharomyces cerevisiae YBR293w similarity to multidrug resistance proteins
YALI1_D25606g	Compare to YALI0D20218g, no similarity
YALI1_D25616g	Compare to YALI0D20240g, weakly similar to uniprot|P07276 Saccharomyces cerevisiae YGR258c RAD2 structure-specific nuclease of the nucleotide excision repairosome
YALI1_D25664g	Compare to YALI0D20262g, similar to uniprot|Q02896 Saccharomyces cerevisiae YPL087w YDC1 alkaline dihydroceramidase, similar to Saccharomyces cerevisiae YPC1 (YBR183W) and YDC1 (YPL087W); ancestral locus Anc_8.564
YALI1_D25715g	Compare to YALI0D20306g, similar to uniprot|P47818 Saccharomyces cerevisiae YLR220w CCC1 involved in calcium regulation singleton, similar to Saccharomyces cerevisiae CCC1 (YLR220W); ancestral locus Anc_8.437
YALI1_D25744g	Compare to YALI0D20328g, highly similar to uniprot|P39079 Saccharomyces cerevisiae YDR188w CCT6 component of chaperonin-containing T-complex (zeta subunit), similar to Saccharomyces cerevisiae CCT6 (YDR188W); ancestral locus Anc_8.393
YALI1_D25786g	Compare to YALI0D20350g, weakly similar to uniprot|P38724 Saccharomyces cerevisiae YHL047c TAF1 siderophore transporter for triacetylfusarinine C P16.1.f6.1
YALI1_D25813g	Compare to YALI0D20394g, weakly similar to uniprot|P26370 Saccharomyces cerevisiae YDL170w UGA3 transcriptional activator for GABA catabolic genes
YALI1_D25851g	Compare to YALI0D20416g, similar to Saccharomyces cerevisiae SLY1 (YDR189W); ancestral locus Anc_8.394, similar to uniprot|P22213 Saccharomyces cerevisiae YDR189w SLY1 hydrophilic suppressor of YPT1 and member of the SEC1P family
YALI1_D25899g	Compare to YALI0D20438g, similar to uniprot|P37304 Saccharomyces cerevisiae YDR251W PAM1 protein
YALI1_D25968g	Compare to YALI0D20460g, similar to Saccharomyces cerevisiae GAL4 (YPL248C); ancestral locus Anc_6.279, some similarities with uniprot|P39113 Saccharomyces cerevisiae YMR280c CAT8 and other transcription factors
YALI1_D26006g	Compare to YALI0D20482g, similar to Saccharomyces cerevisiae GLN3 (YER040W); ancestral locus Anc_3.539, some similarities with uniprot|P78688 Gibberella fujikuroi Nitrogen regulatory protein areA
YALI1_D26036g	Compare to YALI0D20504g, similar to Saccharomyces cerevisiae YGL220W; ancestral locus Anc_3.530, similar to uniprot|P53082 Saccharomyces cerevisiae YGL220W Hypothetical 14.1 kDa protein in NIF3-CLG1 intergenic region
YALI1_D26051g	Compare to YALI0D20526g, similar to Saccharomyces cerevisiae HSP12 (YFL014W); ancestral locus Anc_8.62, weakly similar to uniprot|P22943 Saccharomyces cerevisiae YFL014W 12 kDa heat shock protein (Glucose and lipid-regulated protein)
YALI1_D26084g	Compare to YALI0D20548g, no similarity
YALI1_D26114g	Compare to YALI0D20570g, similar to Saccharomyces cerevisiae CCT3 (YJL014W); ancestral locus Anc_5.163, highly similar to uniprot|P39077 Saccharomyces cerevisiae YJL014w CCT3 chaperonin of the TCP1 ring complex cytosolic
YALI1_D26142g	Compare to YALI0D20592g, similar to Saccharomyces cerevisiae RPC17 (YJL011C); ancestral locus Anc_5.160, weakly similar to uniprot|P47076 Saccharomyces cerevisiae YJL011c weak similarity to chicken hypothetical protein
YALI1_D26146g	Compare to YALI0D20614g, highly similar to uniprot|Q8ISP0 Branchiostoma belcheri Ribosomal protein S18, similar to Saccharomyces cerevisiae RPS18A (YDR450W) and RPS18B (YML026C); ancestral locus Anc_5.566
YALI1_D26186g	Compare to YALI0D20636g, some similarities with uniprot|P53114 Saccharomyces cerevisiae YGL151w NUT1 negative transcription regulator from artifical reporters singleton, similar to Saccharomyces cerevisiae NUT1 (YGL151W); ancestral locus Anc_2.316
YALI1_D26218g	Compare to YALI0D20658g, no similarity
YALI1_D26263g	Compare to YALI0D20680g, similar to uniprot|P53334 Saccharomyces cerevisiae YGR279C Probable family 17 glucosidase SCW4 precursor (EC 3.2.1.-) (Soluble cell wall protein 4)
YALI1_D26316g	Compare to YALI0D20702g, weakly similar to uniprot|Q06488 Saccharomyces cerevisiae YLR357w RSC2 member of RSC complex which remodels the structure of chromatin P2.237.f2.1
YALI1_D26320g	Compare to YALI0D20724g, weakly similar to uniprot|P53686 Saccharomyces cerevisiae YPL015c HST2 similarity to HST1P and SIR2P
YALI1_D26360g	Compare to YALI0D20768g, similar to Saccharomyces cerevisiae LPD1 (YFL018C) and YPL017C; ancestral locus Anc_8.56, similar to uniprot|P09624 Saccharomyces cerevisiae YFL018c LPD1 dihydrolipoamide dehydrogenase precursor P3. 18.f3.1
YALI1_D26394g	Truncated form of YALI0D20790g, weakly similar to uniprot|Q9P6R9 Schizosaccharomyces pombe Cell cycle control protein cwf22, similar to Saccharomyces cerevisiae CWC22 (YGR278W); ancestral locus Anc_5.16
YALI1_D26438g	Compare to YALI0D20834g, similar to KLLA0D12606g Kluyveromyces lactis IPF 4552.1
YALI1_D26467g	Compare to YALI0D20856g, similar to uniprot|P43569 Saccharomyces cerevisiae YFL028c CAF16 ATP-binding cassette transporter family member singleton, similar to Saccharomyces cerevisiae CAF16 (YFL028C); ancestral locus Anc_8.42
YALI1_D26496g	Compare to YALI0D20878g, similar to uniprot|P32353 Saccharomyces cerevisiae YLR056w ERG3 C-5 sterol desaturase singleton, similar to Saccharomyces cerevisiae ERG3 (YLR056W); ancestral locus Anc_8.41
YALI1_D26511g	Compare to YALI0D20900g, no similarity
YALI1_D26529g	Compare to YALI0D20922g, similar to uniprot|Q874I3 Candida albicans H+/nucleoside cotransporter
YALI1_D26559g	Compare to YALI0D20944g, similar to uniprot|Q12016 Saccharomyces cerevisiae Hypothetical protein YOL129W, similar to Saccharomyces cerevisiae VPS68 (YOL129W); ancestral locus Anc_3.40
YALI1_D26586g	Compare to YALI0D20966g, similar to Saccharomyces cerevisiae MCK1 (YNL307C) and YGK3 (YOL128C); ancestral locus Anc_3.41, similar to uniprot|P38615 Saccharomyces cerevisiae YMR139w MDS1 ser/thr protein kinase
YALI1_D26610g	Compare to YALI0D21010g, weakly similar to uniprot|Q06137 Saccharomyces cerevisiae YLR345w similarity to PFK26P and other 6- phosphofructo-2-kinases, similar to Saccharomyces cerevisiae YLR345W; ancestral locus Anc_4.177
YALI1_D26639g	Compare to YALI0D21032g, similar to Saccharomyces cerevisiae CAX4 (YGR036C); ancestral locus Anc_4.179, weakly similar to uniprot|P53223 Saccharomyces cerevisiae YGR036c CAX4 required for full levels of dolichol-linked oligosaccharides in the endoplasmic reticulum
YALI1_D26666g	Compare to YALI0D21076g, some similarities with uniprot|P38866 Saccharomyces cerevisiae YHR176w FMO flavin-containing monooxygenase
YALI1_D26671g	Compare to YALI0D21098g, similar to CA5045|IPF4510 Candida albicans
YALI1_D26721g	Compare to YALI0D21120g, similar to Saccharomyces cerevisiae ULP2 (YIL031W); ancestral locus Anc_7.197, some similarities with uniprot|O13769 Schizosaccharomyces pombe Ubiquitin-like-specific protease 2
YALI1_D26730g	Compare to YALI0D21142g, similar to uniprot|Q01852 Saccharomyces cerevisiae YIL022w TIM44 mitochondrial inner membrane import receptor subunit singleton, similar to Saccharomyces cerevisiae TIM44 (YIL022W); ancestral locus Anc_7.196
YALI1_D26759g	Compare to YALI0D21164g, no similarity
YALI1_D26765g	Compare to YALI0D21186g, weakly similar to uniprot|Q09909 Schizosaccharomyces pombe Cell cycle control protein cwf19
YALI1_D26808g	Compare to YALI0D21208g, similar to Saccharomyces cerevisiae RAD7 (YJR052W); ancestral locus Anc_1.492, similar to uniprot|O74999 Schizosaccharomyces pombe Putative DNA excision repair protein
YALI1_D26844g	Truncated form of YALI0D21230g, some similarities with uniprot|Q00658 Emericella nidulans FlbD
YALI1_D26956g	Compare to YALI0D21318g, similar to Saccharomyces cerevisiae YOR131C; ancestral locus Anc_5.465, similar to uniprot|Q12486 Saccharomyces cerevisiae YOR131c
YALI1_D26978g	Converted to coding from non-coding YALI0D21340g, similar to uniprot|Q6C9C6 Yarrowia lipolytica YALI0D12276g
YALI1_D26993g	Compare to YALI0D21362g, similar to Saccharomyces cerevisiae VPS17 (YOR132W); ancestral locus Anc_5.466, similar to uniprot|P32913 Saccharomyces cerevisiae YOR132w VPS17 vacuolar protein sorting-associated protein singleton
YALI1_D27044g	Compare to YALI0D21384g, similar to Saccharomyces cerevisiae DNL4 (YOR005C); ancestral locus Anc_6.18, weakly similar to uniprot|Q08387 Saccharomyces cerevisiae YOR005c DNL4 DNA ligase IV
YALI1_D27057g	Compare to YALI0D21406g, some similarities with uniprot|Q8LIQ8 Oryza sativa OJ1370_E02.2 protein (OJ1354_H07.12 protein)
YALI1_D27068g	Compare to YALI0D21428g, similar to uniprot|Q8NJM6 Aspergillus fumigatus Hypothetical DNA j domain containing protein
YALI1_D27074g	Compare to YALI0D21450g, similar to Saccharomyces cerevisiae MUD1 (YBR119W); ancestral locus Anc_3.379, similar to uniprot|O74968 Schizosaccharomyces pombe Small nuclear ribonucleoprotein
YALI1_D27100g	Compare to YALI0D21472g, weakly similar to uniprot|Q06712 Neurospora crassa Nuc-1 negative regulatory protein preg
YALI1_D27126g	Compare to YALI0D21494g, similar to DEHA0G23408g Debaryomyces hansenii, similar to Saccharomyces cerevisiae ELP6 (YMR312W); ancestral locus Anc_5.3
YALI1_D27148g	Compare to YALI0D21530g, similar to CA1245|CaIMH3 Candida albicans IMP dehydrogenase
YALI1_D27163g	Compare to YALI0D21538g, no similarity
YALI1_D27181g	Compare to YALI0D21560g, some similarities with uniprot|P53148 Saccharomyces cerevisiae YGL093w SPC105 spindle pole body protein singleton, similar to Saccharomyces cerevisiae SPC105 (YGL093W); ancestral locus Anc_6.179
YALI1_D27235g	Compare to YALI0D21582g, some similarities with uniprot|Q87HL8 Vibrio parahaemolyticus Conserved hypothetical protein and uniprot|Q88HQ8 Pseudomonas putida YeeE/YedE family protein
YALI1_D27251g	Compare to YALI0D21593g, gnl|GLV|YALI0D21593g [Yarrowia lipolytica] similar to uniprot|Q88EF6 Pseudomonas putida (strain KT2440) Hypothetical protein
YALI1_D27274g	Compare to YALI0D21604g, similar to uniprot|P39006 Saccharomyces cerevisiae YNL169C Phosphatidylserine decarboxylase proenzyme 1 mitochondrial precursor (EC 4.1.1.65)
YALI1_D27297g	Compare to YALI0D21626g, similar to uniprot|Q9HF53 Ashbya gossypii Mitochondrial 40S ribosomal protein MRP2, similar to Saccharomyces cerevisiae MRP2 (YPR166C); ancestral locus Anc_7.522
YALI1_D27324g	Compare to YALI0D21648g, some similarities with DEHA0G17006g Debaryomyces hansenii IPF 273.1
YALI1_D27339g	Compare to YALI0D21670g, some similarities with uniprot|Q06551 Saccharomyces cerevisiae YLR246w ERF2 protein involved in palmitoylation and localization of RAS2P
YALI1_D27385g	Compare to YALI0D21684g, some similarities with uniprot|P46995 Saccharomyces cerevisiae YJL168c EZL1 enhancer of zeste-like
YALI1_D27450g	Converted to coding from non-coding YALI0D21692g, weakly similar to uniprot|P29055 Saccharomyces cerevisiae YPR086w SUA7 TFIIB subunit (transcription initiation factor) factor E in frame stop no start
YALI1_D27500g	Compare to YALI0D21725g, no similarity, weakly similar to uniprot|P38853 Saccharomyces cerevisiae YHR158c KEL1 involved in cell fusion and morphology, similar to Saccharomyces cerevisiae KEL2 (YGR238C) and KEL1 (YHR158C); ancestral locus Anc_5.88
YALI1_D27547g	Compare to YALI0D21769g, some similarities with uniprot|Q04749 Saccharomyces cerevisiae YMR068w, similar to Saccharomyces cerevisiae AVO2 (YMR068W); ancestral locus Anc_2.639
YALI1_D27599g	Compare to YALI0D21802g, YALI-IPF5848 YALI0D21791g YALI0D21813g no similarity
YALI1_D27637g	Compare to YALI0D21890g, similar to Saccharomyces cerevisiae AMS1 (YGL156W); ancestral locus Anc_2.311, similar to uniprot|P22855 Saccharomyces cerevisiae YGL156w AMS1 alpha-mannosidase singleton
YALI1_D27718g	Compare to YALI0D21912g, some similarities with uniprot|O42874 Schizosaccharomyces pombe Putative mitotic spindle protein
YALI1_D27748g	Compare to YALI0D21934g, weakly similar to uniprot|Q02204 Saccharomyces cerevisiae YKR006c MRPL13 ribosomal protein YmL13 mitochondrial singleton, similar to Saccharomyces cerevisiae MRPL13 (YKR006C); ancestral locus Anc_2.516
YALI1_D27762g	Compare to YALI0D21956g, similar to uniprot|P22214 Saccharomyces cerevisiae YLR268w SEC22 synaptobrevin (V-SNARE) singleton, similar to Saccharomyces cerevisiae SEC22 (YLR268W); ancestral locus Anc_6.62
YALI1_D27780g	Compare to YALI0D21978g, similar to Saccharomyces cerevisiae NTA1 (YJR062C); ancestral locus Anc_1.510, some similarities with uniprot|P40354 Saccharomyces cerevisiae YJR062c NTA1 amino-terminal amidase singleton
YALI1_D27808g	Compare to YALI0D22000g, weakly similar to uniprot|Q07824 Saccharomyces cerevisiae YLL028w TPO1 polyamine transport protein P12.2. f8.1
YALI1_D27826g	Compare to YALI0D22022g, similar to Saccharomyces cerevisiae ATP16 (YDL004W); ancestral locus Anc_3.213, similar to uniprot|P78700 Kluyveromyces lactis ATP16 ATP synthase delta chain mitochondrial precursor (EC 3.6.3.14)
YALI1_D27844g	Compare to YALI0D22044g, no similarity
YALI1_D27867g	Compare to YALI0D22066g, similar to uniprot|P35182 Saccharomyces cerevisiae YDL006w PTC1 protein serine/threonine phosphatase 2c P5.8. f4.1, similar to Saccharomyces cerevisiae PTC1 (YDL006W); ancestral locus Anc_3.215
YALI1_D27884g	Compare to YALI0D22088g, similar to uniprot|P53875 Saccharomyces cerevisiae YNL185C 60S ribosomal protein L19 mitochondrial precursor, similar to Saccharomyces cerevisiae MRPL19 (YNL185C); ancestral locus Anc_2.70
YALI1_D27912g	Compare to YALI0D22110g, weakly similar to uniprot|O59805 Schizosaccharomyces pombe Acetamidase
YALI1_D27995g	Compare to YALI0D22132g, similar to Saccharomyces cerevisiae YOR051C; ancestral locus Anc_5.650, similar to uniprot|Q08421 Saccharomyces cerevisiae YOR051C
YALI1_D28003g	Compare to YALI0D22154g, similar to Saccharomyces cerevisiae ELG1 (YOR144C); ancestral locus Anc_5.481, weakly similar to DEHA0G05324g Debaryomyces hansenii
YALI1_D28033g	Compare to YALI0D22220g, weakly similar to DEHA0A12529g (INSERT SPECIES), similar to Saccharomyces cerevisiae TYW3 (YGL050W); ancestral locus Anc_4.55
YALI1_D28064g	Compare to YALI0D22242g, no similarity
YALI1_D28087g	Compare to YALI0D22264g, highly similar to uniprot|P04802 Saccharomyces cerevisiae YLL018c DPS1 aspartyl-tRNA synthetase cytosolic P6.12.f3.1, similar to Saccharomyces cerevisiae DPS1 (YLL018C); ancestral locus Anc_4.44
YALI1_D28150g	Compare to YALI0D22286g, weakly similar to uniprot|P04821 Saccharomyces cerevisiae YLR310c CDC25 GDP/GTP exchange factor for RAS1P and RAS2P, similar to Saccharomyces cerevisiae SDC25 (Scer_YGOB_SDC25) and CDC25 (YLR310C); ancestral locus Anc_4.45
YALI1_D28213g	Compare to YALI0D22308g, similar to uniprot|Q04307 Saccharomyces cerevisiae YDR045C DNA-directed RNA polymerases III 12.5 kDa polypeptide (EC 2.7.7.6), similar to Saccharomyces cerevisiae RPC11 (YDR045C); ancestral locus Anc_3.283
YALI1_D28221g	Compare to YALI0D22330g, weakly similar to uniprot|P32833 Saccharomyces cerevisiae YBR060c RRR1 origin recognition complex 72 kDa subunit, similar to Saccharomyces cerevisiae ORC2 (YBR060C); ancestral locus Anc_3.274
YALI1_D28273g	Compare to YALI0D22352g, highly similar to uniprot|P22202 Saccharomyces cerevisiae YER103w SSA4 heat shock protein of HSP70 family cytosolic
YALI1_D28351g	Compare to YALI0D22396g, weakly similar to uniprot|P29029 Saccharomyces cerevisiae YLR286c CTS1endochitinase singleton
YALI1_D28404g	Compare to YALI0D22418g, no similarity
YALI1_D28518g	Compare to YALI0D22440g, similar to uniprot|P35194 Saccharomyces cerevisiae YBL004W Hypothetical 287.5 kDa protein in PDR3-HTA2 intergenic region
YALI1_D28537g	Compare to YALI0D22462g, weakly similar to uniprot|Q6CEI0 Yarrowia lipolytica YALI0B15466g
YALI1_D28569g	Compare to YALI0D22484g, similar to uniprot|P37292 Saccharomyces cerevisiae YBR263w SHM1 serine hydroxymethyltransferase precursor mitochondrial
YALI1_D28630g	Compare to YALI0D22506g, no similarity
YALI1_D28646g	Compare to YALI0D22520g, similar to Saccharomyces cerevisiae BLM10 (YFL007W); ancestral locus Anc_8.69, some similarities with uniprot|P43583 Saccharomyces cerevisiae YFL007w BLM3
YALI1_D28726g	Compare to YALI0D22550g, similar to uniprot|Q6C6H3 Yarrowia lipolytica YALI0E09559g
YALI1_D28825g	Compare to YALI0D22572g, similar to uniprot|O14164 Schizosaccharomyces pombe Probable eukaryotic translation initiation factor 3 93 kDa subunit (eIF3 p93), similar to Saccharomyces cerevisiae NIP1 (YMR309C); ancestral locus Anc_5.9
YALI1_D28842g	Compare to YALI0D22594g, similar to uniprot|P78979 Yarrowia lipolytica transport protein SEC61 alpha subunit, similar to Saccharomyces cerevisiae SSH1 (YBR283C); ancestral locus Anc_1.303
YALI1_D28890g	Compare to YALI0D22616g, weakly similar to uniprot|P38866 Saccharomyces cerevisiae YHR176w FMO flavin-containing monooxygenase
YALI1_D28934g	Compare to YALI0D22638g, similar to Saccharomyces cerevisiae YBR287W; ancestral locus Anc_1.296, similar to DEHA0A10406g Debaryomyces hansenii IPF 7102.1
YALI1_D29109g	Compare to YALI0D22660g, no similarity
YALI1_D29203g	Compare to YALI0D22682g, no similarity
YALI1_D29237g	Compare to YALI0D22748g, weakly similar to uniprot|O42947 Schizosaccharomyces pombe Hypothetical protein
YALI1_D29279g	Compare to YALI0D22770g, similar to uniprot|P13185 Saccharomyces cerevisiae YDR122w KIN1 ser/thr protein kinase
YALI1_D29335g	Compare to YALI0D22803g, similar to uniprot|P40024 Saccharomyces cerevisiae Probable ATP-dependent transporter YER036C
YALI1_D29371g	Compare to YALI0D22825g, no similarity
YALI1_D29419g	Compare to YALI0D22847g, similar to uniprot|P18544 Saccharomyces cerevisiae YOL140w ARG8 acetylornithine aminotransferase P4.45.f3.1
YALI1_D29457g	Compare to YALI0D22869g, no similarity
YALI1_D29481g	Compare to YALI0D22891g, similar to Saccharomyces cerevisiae LYS9 (YNR050C); ancestral locus Anc_6.376, highly similar to uniprot|P38999 Saccharomyces cerevisiae YNR050C Saccharopine dehydrogenase [NADP L- glutamate forming] (EC 1.5.1.10) (Saccharopine reductase)
YALI1_D29523g	Compare to YALI0D22913g, weakly similar to uniprot|Q8TFD3 Mycosphaerella pini Putative dothistromin transporter
YALI1_D29549g	Compare to YALI0D22935g, weakly similar to uniprot|P23293 Saccharomyces cerevisiae YPR161c SGV1 ser/thr protein kinase
YALI1_D29626g	Compare to YALI0D22957g, weakly similar to uniprot|Q12303 Saccharomyces cerevisiae YLR121c YPS3 GPI-anchored aspartyl protease 3 (yapsin 3)
YALI1_D29668g	Compare to YALI0D22979g, weakly similar to uniprot|P53038 Saccharomyces cerevisiae YGR099w TEL2 involved in controlling telomere length and position effect, similar to Saccharomyces cerevisiae TEL2 (YGR099W); ancestral locus Anc_3.442
YALI1_D29699g	Compare to YALI0D23001g, similar to Saccharomyces cerevisiae YPL183C; ancestral locus Anc_6.177, similar to uniprot|Q08924 Saccharomyces cerevisiae YPL183C
YALI1_D29703g	Converted to coding from non-coding YALI0D23023g, some similarities with Saccharomyces cerevisiae YDR320c SWA2 clathrin-bindingprotein required for normal clathrin function and for uncoating of clathrin-coated vesicles no start
YALI1_D29728g	Compare to YALI0D23045g, weakly similar to uniprot|Q9HFN0 Emericella nidulans ARCA protein
YALI1_D29768g	Compare to YALI0D23067g, weakly similar to uniprot|Q96U78 Neurospora crassa Hypothetical 49.4 kDa protein
YALI1_D29831g	Compare to YALI0D23133g, weakly similar to uniprot|P36120 Saccharomyces cerevisiae YKR024c DBP7 RNA helicase required for 60S ribosomal subunit assembly
YALI1_D29852g	Compare to YALI0D23155g, similar to Saccharomyces cerevisiae MRPL25 (YGR076C); ancestral locus Anc_3.137, similar to uniprot|P23369 Saccharomyces cerevisiae YGR076c MRPL25 ribosomal protein YmL25 mitochondrial singleton
YALI1_D29910g	Compare to YALI0D23177g, no similarity
YALI1_D29951g	Compare to YALI0D23199g, no similarity
YALI1_D29966g	Compare to YALI0D23221g, no similarity
YALI1_D29994g	Compare to YALI0D23243g, weakly similar to uniprot|Q9DBZ5 Mus musculus Eukaryotic translation initiation factor 3 subunit 11 (eIF- 3 p25) (eIF3k)
YALI1_D30058g	Compare to YALI0D23265g, similar to Saccharomyces cerevisiae YOR291W; ancestral locus Anc_8.758, similar to uniprot|Q12697 Saccharomyces cerevisiae YOR291w similarity to cation translocating ATPases P16.2. f2.2
YALI1_D30097g	Compare to YALI0D23287g, similar to Saccharomyces cerevisiae SNF2 (YOR290C); ancestral locus Anc_8.753, similar to uniprot|P22082 Saccharomyces cerevisiae YOR290C Transcription regulatory protein SNF2 (SWI/SNF complex component SNF2)
YALI1_D30161g	Compare to YALI0D23309g, similar to uniprot|P37898 Saccharomyces cerevisiae YHR047c AAP1 alanine/arginine aminopeptidase
YALI1_D30196g	Compare to YALI0D23331g, similar to Saccharomyces cerevisiae HEM14 (YER014W); ancestral locus Anc_7.164, weakly similar to uniprot|P40012 Saccharomyces cerevisiae YER014w HEM14
YALI1_D30224g	Compare to YALI0D23353g, similar to Saccharomyces cerevisiae GOS1 (YHL031C); ancestral locus Anc_4.11, similar to uniprot|P38736 Saccharomyces cerevisiae YHL031C Hypothetical 25.4 kDa protein in GUT1-RIM1 intergenic region
YALI1_D30230g	Compare to YALI0D23375g, similar to Saccharomyces cerevisiae MSL1 (YIR009W); ancestral locus Anc_7.165, weakly similar to uniprot|P40567 Saccharomyces cerevisiae YIR009w MSL1 U2 snRNA-associated protein with similarity to U2B
YALI1_D30249g	Compare to YALI0D23386g, gnl|GLV|YALI0D23386g [Yarrowia lipolytica] similar to uniprot|Q6PIX1 Homo sapiens APG10L protein
YALI1_D30256g	Compare to YALI0D23397g, similar to Saccharomyces cerevisiae SDH2 (YLL041C); ancestral locus Anc_4.13, highly similar to uniprot|P21801 Saccharomyces cerevisiae YLL041C Succinate dehydrogenase [ubiquinone] iron-sulfur protein mitochondrial precursor (EC 1.3.5.1) (IP)
YALI1_D30285g	Compare to YALI0D23419g, weakly similar to wi|NCU01901.1 Neurospora crassa NCU01901.1 hypothetical protein
YALI1_D30319g	Compare to YALI0D23441g, similar to Saccharomyces cerevisiae YLR065C; ancestral locus Anc_8.24, similar to uniprot|Q8J2J4 Pichia angusta Hypothetical protein
YALI1_D30324g	Compare to YALI0D23463g, similar to uniprot|Q96X17 Pichia pastoris Sec7p
YALI1_D30420g	Compare to YALI0D23485g, weakly similar to uniprot|P32901 Saccharomyces cerevisiae YKR093w PTR2 peptide transporter
YALI1_D30459g	Compare to YALI0D23551g, similar to Saccharomyces cerevisiae RSA3 (YLR221C); ancestral locus Anc_8.436, similar to uniprot|Q05942 Saccharomyces cerevisiae YLR221C Chromosome XII COSMID 8083
YALI1_D30474g	Compare to YALI0D23573g, similar to Saccharomyces cerevisiae HIF1 (YLL022C); ancestral locus Anc_4.37, similar to uniprot|Q9USQ4 Schizosaccharomyces pombe Hypothetical coiled-coil protein possible histone binding
YALI1_D30506g	Compare to YALI0D23595g, highly similar to uniprot|Q8J058 Coccidioides immitis Septin 2, similar to Saccharomyces cerevisiae CDC3 (YLR314C); ancestral locus Anc_4.38
YALI1_D30540g	Compare to YALI0D23617g, weakly similar to uniprot|Q12164 Saccharomyces cerevisiae Chromosome XII reading frame ORF YLL023C, similar to Saccharomyces cerevisiae YLL023C; ancestral locus Anc_4.36
YALI1_D30570g	Compare to YALI0D23639g, similar to Saccharomyces cerevisiae MSK1 (YNL073W); ancestral locus Anc_2.223, similar to uniprot|O74858 Schizosaccharomyces pombe Lysyl-tRNA synthetase
YALI1_D30593g	Compare to YALI0D23661g, similar to uniprot|P53942 Saccharomyces cerevisiae YNL072w RNH35 RNase H(35) a 35 kDa ribonuclease H, similar to Saccharomyces cerevisiae RNH201 (YNL072W); ancestral locus Anc_2.224
YALI1_D30618g	Compare to YALI0D23683g, similar to uniprot|P12695 Saccharomyces cerevisiae YNL071W Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex mitochondrial precursor (PDC-E2), similar to Saccharomyces cerevisiae LAT1 (YNL071W); ancestral locus Anc_2.225
YALI1_D30653g	Compare to YALI0D23705g, similar to uniprot|P15303 Saccharomyces cerevisiae YPR181c SEC23 component of COPII coat of ER-golgi vesicles
YALI1_D30705g	Compare to YALI0D23727g, no similarity
YALI1_D30781g	Compare to YALI0D23749g, similar to Saccharomyces cerevisiae ZAP1 (YJL056C); ancestral locus Anc_1.326, weakly similar to uniprot|P47043 Saccharomyces cerevisiae YJL056c ZAP1 metalloregulatory protein involved in zinc-responsive transcriptional regulation
YALI1_D30826g	Compare to YALI0D23771g, weakly similar to uniprot|Q6C654 Yarrowia lipolytica YALI0E12331g
YALI1_D30843g	Compare to YALI0D23793g, similar to Saccharomyces cerevisiae PEP8 (YJL053W); ancestral locus Anc_1.329, similar to uniprot|P40335 Saccharomyces cerevisiae YJL053w PEP8 vacuolar protein sorting/targeting protein singleton
YALI1_D30866g	Compare to YALI0D23815g, similar to tuniprot|P53395 Mus musculus Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex mitochondrial precursor
YALI1_D30899g	Compare to YALI0D23837g, no similarity
YALI1_D30922g	Compare to YALI0D23859g, similar to Saccharomyces cerevisiae IMP4 (YNL075W); ancestral locus Anc_2.221, highly similar to uniprot|P53941 Saccharomyces cerevisiae YNL075W U3 small nucleolar ribonucleoprotein protein IMP4
YALI1_D30941g	Compare to YALI0D23881g, similar to Saccharomyces cerevisiae NAM7 (YMR080C); ancestral locus Anc_2.489, similar to uniprot|P30771 Saccharomyces cerevisiae YMR080c NAM7 nonsense-mediated mRNA decay protein
YALI1_D30999g	Compare to YALI0D23903g, some similarities with uniprot|P33314 Saccharomyces cerevisiae YKL092C Inhibitory regulator protein BUD2/CLA2, similar to Saccharomyces cerevisiae BUD2 (YKL092C); ancestral locus Anc_2.490
YALI1_D31083g	Compare to YALI0D23925g, no similarity
YALI1_D31155g	Compare to YALI0D23947g, some similarities with uniprot|P25386 Saccharomyces cerevisiae YDL058w USO1 intracellular protein transport protein
YALI1_D31186g	Compare to YALI0D23969g, similar to Saccharomyces cerevisiae TOP2 (YNL088W); ancestral locus Anc_2.201, similar to uniprot|P06786 Saccharomyces cerevisiae YNL088w TOP2 DNA topoisomerase II (ATP-hydrolysing)
YALI1_D31258g	Converted to coding from non-coding YALI0D23991g, pseudogene uniprot|Q8NIP3 Yarrowia lipolytica Reverse transcriptase
YALI1_D31274g	Compare to YALI0D24035g, similar to Saccharomyces cerevisiae TAO3 (YIL129C); ancestral locus Anc_2.232, similar to uniprot|P40468 Saccharomyces cerevisiae YIL129C Cell morphogenesis protein PAG1 (TAO3 protein)
YALI1_D31387g	Compare to YALI0D24057g, weakly similar to uniprot|P53195 Saccharomyces cerevisiae YGL005c weak similarity to Xenopus kinesin- related protein Eg5
YALI1_D31402g	Compare to YALI0D24079g, weakly similar to uniprot|Q86ZA2 Cochliobolus heterostrophus KLP9 Kinesin
YALI1_D31482g	Compare to YALI0D24101g, some similarities with uniprot|Q8TG35 Candida albicans Mnn4p
YALI1_D31568g	Compare to YALI0D24123g, similar to Saccharomyces cerevisiae CTF18 (YMR078C); ancestral locus Anc_2.492, weakly similar to uniprot|P49956 Saccharomyces cerevisiae YMR078C CHL12 protein
YALI1_D31624g	Compare to YALI0D24145g, weakly similar to uniprot|Q08991 Saccharomyces cerevisiae YPL279C
YALI1_D31672g	Truncated form of YALI0D24167g, similar to Saccharomyces cerevisiae CBF1 (YJR060W); ancestral locus Anc_1.508, some similarities with uniprot|P17106 Saccharomyces cerevisiae YJR060w CBF1 kinetochore protein
YALI1_D31719g	Compare to YALI0D24189g, similar to uniprot|P53049 Saccharomyces cerevisiae YGR281W Oligomycin resistance ATP-dependent permease YOR1 no start
YALI1_D31823g	Compare to YALI0D24211g, similar to uniprot|P53874 Saccharomyces cerevisiae YNL186W Ubiquitin carboxyl-terminal hydrolase 10 (EC 3.1.2. 15)
YALI1_D31866g	Compare to YALI0D24233g, weakly similar to uniprot|Q9P668 Neurospora crassa Conserved hypothetical protein, similar to Saccharomyces cerevisiae VNX1 (YNL321W); ancestral locus Anc_3.19
YALI1_D31914g	Compare to YALI0D24277g, no similarity
YALI1_D32002g	Compare to YALI0D24299g, similar to Saccharomyces cerevisiae CDC33 (YOL139C); ancestral locus Anc_3.20, similar to uniprot|P78954 Schizosaccharomyces pombe Eukaryotic translation initiation factor 4E-1 CDC33 homologue
YALI1_D32013g	Compare to YALI0D24321g, similar to Saccharomyces cerevisiae YNL320W; ancestral locus Anc_3.21, similar to uniprot|P42840 Saccharomyces cerevisiae YNL320W Hypothetical 32.3 kDa protein in KRE1-HXT14 intergenic region
YALI1_D32070g	Compare to YALI0D24343g, similar to Saccharomyces cerevisiae TIM54 (YJL054W); ancestral locus Anc_1.328, weakly similar to uniprot|P47045 Saccharomyces cerevisiae YJL054W Hypothetical 54.2 kDa protein in BTN1- PEP8 intergenic region
YALI1_D32111g	Compare to YALI0D24365g, weakly similar to uniprot|P05790 Bombyx mori Fibroin heavy chain precursor (Fib-H) (H-fibroin)
YALI1_D32153g	Compare to YALI0D24387g, highly similar to uniprot|P54780 Saccharomyces cerevisiae YMR121C 60S ribosomal protein L15-B (YL10) (L13) (RP15R) (YP18), similar to Saccharomyces cerevisiae RPL15A (YLR029C) and RPL15B (YMR121C); ancestral locus Anc_2.417
YALI1_D32209g	Compare to YALI0D24409g, similar to Saccharomyces cerevisiae ADE16 (YLR028C) and ADE17 (YMR120C); ancestral locus Anc_2.418, highly similar to uniprot|P38009 Saccharomyces cerevisiae YMR120C Bifunctional purine biosynthesis protein ADE17 [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) (AICAR transformylase)
YALI1_D32268g	Compare to YALI0D24431g, similar to uniprot|Q8X096 Neurospora crassa Probable ATP citrate lyase subunit 2
YALI1_D32316g	Compare to YALI0D24453g, weakly similar to uniprot|Q9VAV4 Drosophila melanogaster CG1540 protein
YALI1_D32369g	Compare to YALI0D24475g, no similarity possibly noncoding
YALI1_D32424g	Compare to YALI0D24497g, similar to uniprot|Q12389 Saccharomyces cerevisiae YDL031W Probable Similar to RNA-dependent helicase DBP10 (DEAD-box protein 10)
YALI1_D32435g	Compare to YALI0D24519g, no similarity
YALI1_D32468g	Compare to YALI0D24541g, weakly similar to uniprot|P40564 Saccharomyces cerevisiae YIR004w DJP1 DnaJ-like
YALI1_D32519g	Compare to YALI0D24563g, some similarities with wi|NCU06705.1 Neurospora crassa NCU06705.1 hypothetical protein
YALI1_D32550g	Compare to YALI0D24585g, similar to uniprot|Q86ZJ8 Podospora anserina NADH- ubiquinone reductase accessory subunit (complex I)
YALI1_D32568g	Compare to YALI0D24607g, similar to uniprot|P36035 Saccharomyces cerevisiae YKL217W Carboxylic acid transporter protein homolog
YALI1_D32594g	Compare to YALI0D24629g, weakly similar to uniprot|P32463 Saccharomyces cerevisiae YKL192c ACP1 mitochonrial acyl-carrier protein, similar to Saccharomyces cerevisiae ACP1 (YKL192C); ancestral locus Anc_4.297
YALI1_D32619g	Compare to YALI0D24651g, similar to uniprot|O94343 Schizosaccharomyces pombe Putative MSF transporter
YALI1_D32663g	Converted to coding from non-coding YALI0D24673g, similar to KLLA0C14520g Kluyveromyces lactis frameshift no start
YALI1_D32695g	Compare to YALI0D24728g, weakly similar to wi|NCU05004.1 Neurospora crassa NCU05004.1 hypothetical protein
YALI1_D32754g	Compare to YALI0D24750g, uniprot|O74936 Yarrowia lipolytica POX3 Acyl-CoA oxidase 3 (EC 1.3.3.6), peroxisomal, specific toward short chain fatty acid
YALI1_D32812g	Compare to YALI0D24772g, weakly similar to uniprot|P46996 Saccharomyces cerevisiae YJL163C Hypothetical 61.5 kDa protein in TPK1- CCW7 intergenic region
YALI1_D32832g	Compare to YALI0D24816g, no similarity
YALI1_D32880g	Compare to YALI0D24830g, weakly similar to uniprot|Q6C7X6 Yarrowia lipolytica YALI0D24830g
YALI1_D32934g	Truncated form of YALI0D24849g, gnl|GLV|YALI0D24849g [Yarrowia lipolytica] weakly similar to uniprot|Q9PH93 Xylella fastidiosa Hypothetical protein [Xf0051]
YALI1_D32958g	Compare to YALI0D24860g, weakly similar to uniprot|Q01652 Penicillium chrysogenum PHOG related to acid phosphatase
YALI1_D33042g	Compare to YALI0D24926g, similar to Saccharomyces cerevisiae MDM34 (YGL219C); ancestral locus Anc_3.529, weakly similar to uniprot|Q9UUC9 Schizosaccharomyces pombe Hypothetical 50.3 kDa protein
YALI1_D33105g	Compare to YALI0D24970g, similar to uniprot|Q9P7T6 Schizosaccharomyces pombe Hypothetical protein C694.04c in chromosome I, similar to Saccharomyces cerevisiae YER156C; ancestral locus Anc_8.208
YALI1_D33119g	Compare to YALI0D24992g, similar to Saccharomyces cerevisiae PET100 (YDR079W); ancestral locus Anc_8.209, weakly similar to uniprot|P38958 Saccharomyces cerevisiae YDR079w PET100 cytochrome-c oxidase assembly protein singleton no start
YALI1_D33168g	Compare to YALI0D25014g, weakly similar to uniprot|Q97P71 Streptococcus pneumoniae Cell wall surface anchor family protein
YALI1_D33207g	Compare to YALI0D25036g, similar to Saccharomyces cerevisiae TVP23 (YDR084C); ancestral locus Anc_8.216, similar to uniprot|Q9Y7K7 Schizosaccharomyces pombe Hypothetical protein
YALI1_D33229g	Compare to YALI0D25058g, similar to uniprot|Q04636 Saccharomyces cerevisiae YML069w POB3 protein that binds to DNA polymerase I (PolI), similar to Saccharomyces cerevisiae POB3 (YML069W); ancestral locus Anc_4.333
YALI1_D33274g	Compare to YALI0D25080g, uniprot|Q96VM0 Yarrowia lipolytica dTDP-glucose 4 6- dehydratase
YALI1_D33307g	Compare to YALI0D25102g, weakly similar to uniprot|Q7RXQ1 Neurospora crassa NCU00157.1 hypothetical protein
YALI1_D33321g	Compare to YALI0D25124g, no similarity
YALI1_D33350g	Compare to YALI0D25146g, similar to uniprot|Q9C467 Emericella nidulans COP9 signalosome subunit 4
YALI1_D33380g	Compare to YALI0D25168g, similar to uniprot|P06106 Saccharomyces cerevisiae YLR303w MET25 O-acetylhomoserine sulfhydrylase P5.26.f3.1
YALI1_D33418g	Compare to YALI0D25190g, similar to Saccharomyces cerevisiae VHS1 (YDR247W) and SKS1 (YPL026C); ancestral locus Anc_8.477, highly similar to uniprot|P17157 Saccharomyces cerevisiae YPL031c PHO85
YALI1_D33428g	Compare to YALI0D25212g, similar to Saccharomyces cerevisiae YPL030W; ancestral locus Anc_8.481, similar to uniprot|Q02648 Saccharomyces cerevisiae YPL030W LPB1P
YALI1_D33465g	Compare to YALI0D25234g, similar to Saccharomyces cerevisiae PUS4 (YNL292W); ancestral locus Anc_3.67, weakly similar to uniprot|P48567 Saccharomyces cerevisiae YNL292w EXM1
YALI1_D33504g	Compare to YALI0D25256g, similar to uniprot|P53839 Saccharomyces cerevisiae YNL274c
YALI1_D33552g	Compare to YALI0D25278g, weakly similar to uniprot|P32339 Saccharomyces cerevisiae YLR205c hypothetical protein, similar to Saccharomyces cerevisiae HMX1 (YLR205C); ancestral locus Anc_7.344
YALI1_D33599g	Compare to YALI0D25322g, weakly similar to uniprot|O55125 Mus musculus NipSnap1 protein
YALI1_D33640g	Compare to YALI0D25344g, weakly similar to uniprot|P53628 Saccharomyces cerevisiae YNR023w SNF12 component of SWI/SNF global transcription activator complex
YALI1_D33653g	Compare to YALI0D25366g, similar to uniprot|Q8I1N3 Trypanosoma cruzi Ascorbate- dependent peroxidase CCP1 homologue
YALI1_D33696g	Compare to YALI0D25388g, similar to uniprot|P53104 Saccharomyces cerevisiae YGL180w serine/threonine-protein kinase APG1 essential for autophagocytosis
YALI1_D33735g	Compare to YALI0D25454g, similar to Saccharomyces cerevisiae PER1 (YCR044C); ancestral locus Anc_1.72, weakly similar to uniprot|P25625 Saccharomyces cerevisiae YCR044c PER1 involved in manganese homeostasis
YALI1_D33780g	Compare to YALI0D25476g, similar to Saccharomyces cerevisiae YDR531W; ancestral locus Anc_1.18, similar to uniprot|O93921 Emericella nidulans Pantothenate kinase (EC 2.7.1.33)
YALI1_D33820g	Compare to YALI0D25498g, no similarity
YALI1_D33835g	Compare to YALI0D25520g, weakly similar to uniprot|P25386 Saccharomyces cerevisiae YDL058w USO1
YALI1_D33879g	Compare to YALI0D25542g, weakly similar to uniprot|Q9I672 Pseudomonas aeruginosa Hypothetical protein
YALI1_D33889g	Compare to YALI0D25564g, similar to Saccharomyces cerevisiae FAD1 (YDL045C); ancestral locus Anc_3.146, similar to uniprot|P38913 Saccharomyces cerevisiae YDL045c FAD1 flavin adenine dinucleotide (FAD) synthetase
YALI1_D33919g	Compare to YALI0D25586g, no similarity
YALI1_D33941g	Compare to YALI0D25608g, no similarity
YALI1_D33961g	Compare to YALI0D25630g, uniprot|Q9UW08 Yarrowia lipolytica Alcohol dehydrogenase 1
YALI1_D33978g	Compare to YALI0D25652g, similar to Saccharomyces cerevisiae PRP11 (YDL043C); ancestral locus Anc_3.150, similar to uniprot|Q7ZVD4 Similar to Brachydanio rerio splicing factor 3a subunit
YALI1_D33988g	Compare to YALI0D25674g, weakly similar to uniprot|Q12311 Saccharomyces cerevisiae YPR031w, similar to Saccharomyces cerevisiae NTO1 (YPR031W); ancestral locus Anc_7.439
YALI1_D34022g	Compare to YALI0D25696g, weakly similar to uniprot|O74508 Schizosaccharomyces pombe SPCC594.05c, similar to Saccharomyces cerevisiae SPP1 (YPL138C); ancestral locus Anc_8.650
YALI1_D34043g	Compare to YALI0D25718g, similar to uniprot|O14274 Schizosaccharomyces pombe Conserved hypothetical protein, similar to Saccharomyces cerevisiae DTD1 (YDL219W); ancestral locus Anc_2.59
YALI1_D34057g	Compare to YALI0D25740g, some similarities with uniprot|Q04493 Saccharomyces cerevisiae YML094W Prefoldin subunit 5, similar to Saccharomyces cerevisiae GIM5 (YML094W); ancestral locus Anc_8.873
YALI1_D34078g	Compare to YALI0D25762g, similar to Saccharomyces cerevisiae RAD10 (YML095C); ancestral locus Anc_8.874, weakly similar to uniprot|Q06182 Schizosaccharomyces pombe Mating-type switching protein swi10
YALI1_D34106g	Compare to YALI0D25784g, weakly similar to uniprot|O74782 Schizosaccharomyces pombe Hypothetical protein
YALI1_D34119g	Compare to YALI0D25806g, weakly similar to uniprot|Q6CHW4 Yarrowia lipolytica YALI0A04191g
YALI1_D34149g	Compare to YALI0D25828g, similar to uniprot|Q08234 Saccharomyces cerevisiae Probable ATP-dependent transporter YOL074C/YOL075C, similar to Saccharomyces cerevisiae YOL075C; ancestral locus Anc_3.133
YALI1_D34213g	Compare to YALI0D25850g, weakly similar to uniprot|Q9P7W4 Schizosaccharomyces pombe F-box/WD-repeat protein pof10 (Skp1-binding protein 2)
YALI1_D34232g	Compare to YALI0D25872g, similar to uniprot|P32867 Saccharomyces cerevisiae YPL232W SSO1 protein
YALI1_D34258g	Compare to YALI0D25894g, similar to uniprot|P27882 Saccharomyces cerevisiae YGR029W ERV1 protein mitochondrial precursor (14 kDa regulatory protein)
YALI1_D34270g	Compare to YALI0D25916g, no similarity
YALI1_D34288g	Compare to YALI0D25938g, similar to uniprot|P08004 Saccharomyces cerevisiae YNL192w CHS1 chitin synthase I P2.162.f2.1
YALI1_D34353g	Converted to coding from non-coding YALI0D25960g, similar to uniprot|P46367 Saccharomyces cerevisiae YOR374w ALD4 aldehyde dehydrogenase frameshift
YALI1_D34395g	Compare to YALI0D26015g, similar to Saccharomyces cerevisiae CDC5 (YMR001C); ancestral locus Anc_6.31, similar to uniprot|P32562 Saccharomyces cerevisiae YMR001C Cell cycle protein kinase CDC5/MSD2 (EC 2.7.1.-)
YALI1_D34446g	Compare to YALI0D26081g, weakly similar to uniprot|P78588 Candida albicans Probable ferric reductase transmembrane component (EC 1.16. 1.7)
YALI1_D34487g	Compare to YALI0D26103g, similar to Saccharomyces cerevisiae TOP1 (YOL006C); ancestral locus Anc_6.32, similar to uniprot|Q00313 Candida albicans DNA topoisomerase I (EC 5.99.1.2)
YALI1_D34508g	Compare to YALI0D26125g, similar to uniprot|P53949 Saccharomyces cerevisiae YNL056W Hypothetical 22.5 kDa protein in ARP5-OMP2 intergenic region
YALI1_D34529g	Compare to YALI0D26147g, similar to uniprot|Q9C2K1 Neurospora crassa ARALAR1 Probable mitochondrial carrier protein
YALI1_D34594g	Compare to YALI0D26169g, no similarity
YALI1_D34610g	Truncated form of YALI0D26191g, weakly similar to uniprot|Q06133 Saccharomyces cerevisiae YLR337c VRP1 verprolin
YALI1_D34621g	Truncated form of YALI0D26191g, similar to Saccharomyces cerevisiae VRP1 (YLR337C); ancestral locus Anc_4.168, weakly similar to uniprot|Q06133 Saccharomyces cerevisiae YLR337c VRP1 verprolin
YALI1_D34643g	Compare to YALI0D26213g, weakly similar to uniprot|Q96WJ8 Blumeria graminis Protein kinase C-like protein
YALI1_D34684g	Compare to YALI0D26235g, similar to Saccharomyces cerevisiae LAS21 (YJL062W); ancestral locus Anc_1.317, uniprot|Q96X26 Yarrowia lipolytica GPI7 required for addition of a side chain to the glycosylphospatidylinositol (GPI) core structure
YALI1_D34710g	Compare to YALI0D26257g, weakly similar to uniprot|P08640 Saccharomyces cerevisiae YIR019c STA1 extracellular alpha-1 4-glucan glucosidase
YALI1_D34739g	Compare to YALI0D26279g, similar to uniprot|P39984 Saccharomyces cerevisiae YEL056w HAT2 subunit of the major yeast histone acetyltransferase
YALI1_D34758g	Compare to YALI0D26301g, similar to Saccharomyces cerevisiae RPB11 (YOL005C); ancestral locus Anc_6.30, similar to uniprot|P38902 Saccharomyces cerevisiae YOL005C DNA-directed RNA polymerase II 13.6 kDa polypeptide (EC 2.7.7.6) (B13.6)
YALI1_D34785g	Compare to YALI0D26315g, similar to Saccharomyces cerevisiae SIN3 (YOL004W); ancestral locus Anc_6.29, uniprot|Q8WZL5 Yarrowia lipolytica Sin3 protein transcription regulatory protein
YALI1_D34840g	Compare to YALI0D26323g, no similarity
YALI1_D34860g	Compare to YALI0D26345g, similar to Saccharomyces cerevisiae PFA4 (YOL003C); ancestral locus Anc_6.28, similar to uniprot|Q12006 Saccharomyces cerevisiae YOL003c
YALI1_D34865g	Compare to YALI0D26367g, similar to Saccharomyces cerevisiae ARG4 (YHR018C); ancestral locus Anc_1.354, highly similar to uniprot|P04076 Saccharomyces cerevisiae YHR018c ARG4 arginosuccinate lyase
YALI1_D34893g	Compare to YALI0D26389g, similar to Saccharomyces cerevisiae YHR132W-A and YNL157W; ancestral locus Anc_2.109, similar to uniprot|P79058 Schizosaccharomyces pombe Hypothetical 15.4 kDa protein C10F6.16 in chromosome I
YALI1_D34933g	Compare to YALI0D26411g, weakly similar to uniprot|Q884V4 Pseudomonas syringae Chemotaxis sensor histidine kinase CheA
YALI1_D34980g	Compare to YALI0D26466g, no similarity possibly noncoding
YALI1_D35025g	Compare to YALI0D26488g, similar to uniprot|Q9C0V7 Schizosaccharomyces pombe Putative arylsulfatase
YALI1_D35061g	Compare to YALI0D26510g, similar to uniprot|Q05785 Saccharomyces cerevisiae YLR206w ENT2 clathrin binding protein, similar to Saccharomyces cerevisiae ENT3 (YJR125C); ancestral locus Anc_4.346
YALI1_D35096g	Compare to YALI0D26532g, similar to Saccharomyces cerevisiae YMR126C; ancestral locus Anc_2.412, some similarities with DEHA0G13519g Debaryomyces hansenii IPF14493
YALI1_D35119g	Compare to YALI0D26554g, similar to Saccharomyces cerevisiae YKL077W; ancestral locus Anc_2.624, weakly similar to uniprot|P36081 Saccharomyces cerevisiae YKL077w hypothetical protein
YALI1_D35126g	Compare to YALI0D26576g, similar to Saccharomyces cerevisiae SEN15 (YMR059W); ancestral locus Anc_2.625, similar to uniprot|Q04675 Saccharomyces cerevisiae YMR059w SEN15 tRNA splicing endonuclease delta subunit singleton
YALI1_D35143g	Compare to YALI0D26598g, weakly similar to uniprot|P40963 Saccharomyces cerevisiae YMR127C SAS2 protein
YALI1_D35148g	Compare to YALI0D26620g, similar to uniprot|Q04217 Saccharomyces cerevisiae YMR128W Probable ATP-dependent RNA helicase DHR1, similar to Saccharomyces cerevisiae DHR2 (YKL078W); ancestral locus Anc_2.629
YALI1_D35190g	Compare to YALI0D26642g, similar to uniprot|Q01961 Pichia pastoris Peroxisome assembly protein PAS10, similar to Saccharomyces cerevisiae PEX12 (YMR026C); ancestral locus Anc_2.576
YALI1_D35210g	Compare to YALI0D26664g, similar to uniprot|O23676 Arabidopsis thaliana Mago nashi protein
YALI1_D35258g	Compare to YALI0D26730g, similar to uniprot|Q05497 Saccharomyces cerevisiae YDR338c
YALI1_D35356g	Compare to YALI0D26818g, similar to Saccharomyces cerevisiae SMF3 (YLR034C); ancestral locus Anc_2.407, similar to uniprot|P38778 Saccharomyces cerevisiae YHR050W Transporter protein SMF2
YALI1_D35394g	Compare to YALI0D26840g, weakly similar to uniprot|Q07979 Saccharomyces cerevisiae Chromosome XII reading frame ORF YLR033W, similar to Saccharomyces cerevisiae RSC58 (YLR033W); ancestral locus Anc_2.408
YALI1_D35398g	Compare to YALI0D26862g, similar to uniprot|Q04673 Saccharomyces cerevisiae YLR005w SSL1 TFIIH, similar to Saccharomyces cerevisiae SSL1 (YLR005W); ancestral locus Anc_5.226
YALI1_D35424g	Compare to YALI0D26884g, weakly similar to uniprot|O15387 Homo sapiens MOV34 ISOLOG
YALI1_D35435g	Compare to YALI0D26906g, similar to Saccharomyces cerevisiae YDR262W; ancestral locus Anc_5.623, weakly similar to uniprot|Q12331 Saccharomyces cerevisiae Hypothetical 30.6 kDa protein YDR262W
YALI1_D35443g	Compare to YALI0D26928g, weakly similar to to DEHA-IPF261.1 Debaryomyces hansenii
YALI1_D35484g	Compare to YALI0D26950g, weakly similar to uniprot|P25386 Saccharomyces cerevisiae YDL058w USO1
YALI1_D35509g	Compare to YALI0D26972g, similar to Saccharomyces cerevisiae FMS1 (YMR020W); ancestral locus Anc_2.567, weakly similar to uniprot|Q9Y802 Schizosaccharomyces pombe
YALI1_D35575g	Compare to YALI0D26994g, similar to Saccharomyces cerevisiae RRN3 (YKL125W); ancestral locus Anc_2.447, some similarities with uniprot|P36070 Saccharomyces cerevisiae YKL125W RNA polymerase I specific transcription initiation factor RRN3
YALI1_D35593g	Compare to YALI0D27016g, similar to Saccharomyces cerevisiae PAH1 (YMR165C); ancestral locus Anc_2.345, some similarities with uniprot|Q9UUJ6 Schizosaccharomyces pombe Nuclear elongation and deformation protein 1
YALI1_D35635g	Compare to YALI0D27038g, similar to Saccharomyces cerevisiae CCC2 (YDR270W); ancestral locus Anc_5.636, similar to uniprot|P38995 Saccharomyces cerevisiae YDR270w CCC2
YALI1_D35669g	Compare to YALI0D27060g, weakly similar to uniprot|Q873C1Neurospora crassa Hypothetical protein B24N11.020
YALI1_D35711g	Compare to YALI0D27082g, weakly similar to DEHA-IPF4329.1 Debaryomyces hansenii DEHA0G08701g
YALI1_D35718g	Compare to YALI0D27104g, similar to Saccharomyces cerevisiae YPT35 (YHR105W); ancestral locus Anc_5.410, some similarities with wi|NCU03221.1 Neurospora crassa NCU03221.1 predicted protein
YALI1_D35735g	Compare to YALI0D27126g, similar to Saccharomyces cerevisiae TRR1 (YDR353W) and TRR2 (YHR106W); ancestral locus Anc_5.411, similar to uniprot|P29509 Saccharomyces cerevisiae YDR353W Thioredoxin reductase 1
YALI1_D35768g	Compare to YALI0D27148g, similar to uniprot|P32468 Saccharomyces cerevisiae YHR107c CDC12 septin, similar to Saccharomyces cerevisiae CDC12 (YHR107C); ancestral locus Anc_5.412
YALI1_D35787g	Compare to YALI0D27170g, similar to Saccharomyces cerevisiae TRP4 (YDR354W); ancestral locus Anc_5.413, weakly similar to uniprot|P07285 Saccharomyces cerevisiae YDR354w TRP4 anthranilate phosphoribosyltransferase
YALI1_D35809g	Compare to YALI0D27192g, similar to Saccharomyces cerevisiae GGA1 (YDR358W) and GGA2 (YHR108W); ancestral locus Anc_5.416, similar to uniprot|P38817 Saccharomyces cerevisiae YHR108W ADP-ribosylation factor binding protein GGA2
YALI1_D35852g	Compare to YALI0D27214g, similar to uniprot|Q8TFK5 Yarrowia lipolytica Cell wall protein
YALI1_D35870g	Compare to YALI0D27236g, weakly similar to uniprot|Q9XTH4 Caenorhabditis elegans Hypothetical protein K08H10.2a
YALI1_D35907g	Compare to YALI0D27258g, some similarities with uniprot|Q06337 Saccharomyces cerevisiae YDR359c VID21 weak similarity to human trichohyalin, similar to Saccharomyces cerevisiae EAF1 (YDR359C); ancestral locus Anc_5.417
YALI1_D35911g	Compare to YALI0D27280g, some similarities with wi|NCU07418.1 Neurospora crassa NCU07418.1 hypothetical protein
YALI1_D35945g	Compare to YALI0D27302g, similar to Saccharomyces cerevisiae PEX32 (YBR168W); ancestral locus Anc_8.592, uniprot|Q9UV60 Yarrowia lipolytica YALI0D27302g PEX23 integral peroxisomal membrane protein putative lipoate- protein ligase B activity required for matrix proteins localisation
YALI1_D35965g	Compare to YALI0D27324g, similar to Saccharomyces cerevisiae BCP1 (YDR361C); ancestral locus Anc_5.418, similar to uniprot|O74907 Schizosaccharomyces pombe Hypothetical
YALI1_D35966g	Compare to YALI0D27346g, similar to uniprot|P40968 Saccharomyces cerevisiae YDR364c
YALI1_D36035g	Putative zinc finger protein
YALI1_D36100g	similar to Saccharomyces cerevisiae YNL011C; ancestral locus Anc_1.394,Putative CofD related protein
YALI1_D36122g	similar to Saccharomyces cerevisiae YNL010W; ancestral locus Anc_1.395
YALI1_D36137g	similar to Saccharomyces cerevisiae APS1 (YLR170C); ancestral locus Anc_1.388
YALI1_D36161g	Mannosyltransferase
YALI1_D36182g	Probable glutathione S transferase protein
YALI1_D36255g	Heat shock protein:2
YALI1_D36286g	Compare to YALI0D00110g:2, no similarity
YALI1_E00115g	Heat shock protein:3
YALI1_E00280g	similar to Saccharomyces cerevisiae LDB19 (YOR322C); ancestral locus Anc_7.75
YALI1_E00306g	Putative exonuclease
YALI1_E00318g	similar to Saccharomyces cerevisiae MRPL10 (YNL284C); ancestral locus Anc_3.77,Ribsomal 50S protein
YALI1_E00337g	similar to Saccharomyces cerevisiae YBR242W and YGL101W; ancestral locus Anc_6.157
YALI1_E00389g	Compare to YALI0E00110g, similar to uniprot|P08540|PHOX_KLULA Kluyveromyces lactis KLLA0B14839g Potential acid phosphatase
YALI1_E00412g	Compare to YALI0E00132g, similar to uniprot|Q13356 Homo sapiens PPIL2 Peptidyl- prolyl cis-trans isomerase like 2
YALI1_E00437g	Compare to YALI0E00154g, similar to uniprot|P38903 Saccharomyces cerevisiae YOR014w RTS1 potential regulatory subunit of protein phosphatase 2A possible transmembrane segment, similar to Saccharomyces cerevisiae RTS1 (YOR014W); ancestral locus Anc_7.106
YALI1_E00510g	Compare to YALI0E00176g, similar to uniprot|P19524 Saccharomyces cerevisiae YOR326w MYO2 myosin heavy chain
YALI1_E00533g	Compare to YALI0E00198g, some similarities with uniprot|P12754 Saccharomyces cerevisiae YGR083c GCD2 translation initiation factor eIF2B 71 kDa (delta)subunit, similar to Saccharomyces cerevisiae GCD2 (YGR083C); ancestral locus Anc_3.413
YALI1_E00551g	Compare to YALI0E00220g, similar to Saccharomyces cerevisiae MRP17 (YKL003C); ancestral locus Anc_2.508, similar to uniprot|P28778 Saccharomyces cerevisiae YKL003c MRP17 ribosomal protein of the small subunit mitochondrial
YALI1_E00574g	Compare to YALI0E00242g, similar to Saccharomyces cerevisiae GCV3 (YAL044C); ancestral locus Anc_7.25, similar to uniprot|P39726 Saccharomyces cerevisiae YAL044c GCV3 glycine decarboxylase subunit H
YALI1_E00588g	Compare to YALI0E00264g, similar to uniprot|P46367 Saccharomyces cerevisiae YOR374w ALD4 aldehyde dehydrogenase mitochondrial possible transmembrane segment
YALI1_E00613g	Compare to YALI0E00286g, similar to uniprot|CAD70715 Yarrowia lipolytica LIP7 lipase or uniprot|CAD70716 Yarrowia lipolytica LIP8 lipase possible transmembrane segment
YALI1_E00628g	Compare to YALI0E00308g, weakly similar to uniprot|P38680 Neurospora crassa MTR N- amino acid transport system protein (Methyltryptophan resistance protein) possible transmembrane segments
YALI1_E00680g	Compare to YALI0E00330g, no similarity
YALI1_E00746g	Compare to YALI0E00396g, similar to Saccharomyces cerevisiae DID4 (YKL002W); ancestral locus Anc_2.509, similar to uniprot|Q9P6Q7 Schizosaccharomyces pombe SPAC644.03C
YALI1_E00760g	Compare to YALI0E00418g, similar to Saccharomyces cerevisiae MET14 (YKL001C); ancestral locus Anc_2.510, highly similar to uniprot|Q9C2Y6 Saccharomyces pastorianus MET14-CA Adenosine-5 -phosphosulfate kinase
YALI1_E00824g	Compare to YALI0E00462g, some similarities with uniprot|Q08269 Saccharomyces cerevisiae YOL130w ALR1 divalent cation transporter possible transmembrane segments
YALI1_E00869g	Compare to YALI0E00484g, no similarity
YALI1_E00872g	Compare to YALI0E00506g, weakly similar to uniprot|O13807 Schizosaccharomyces pombe Putative (Xeroderma pigmentosum- group E like) DNA- binding protein
YALI1_E00907g	Compare to YALI0E00528g, some similarities with uniprot|Q07950 Saccharomyces cerevisiae YLR020C possible transmembrane segment, similar to Saccharomyces cerevisiae YEH1 (YLL012W) and YEH2 (YLR020C); ancestral locus Anc_5.200
YALI1_E00928g	Compare to YALI0E00550g, similar to Saccharomyces cerevisiae RPL14B (YHL001W) and RPL14A (YKL006W); ancestral locus Anc_2.505, similar to uniprot|P36105 Saccharomyces cerevisiae YKL006w RPL14A ribosomal protein or uniprot|P38754 Saccharomyces cerevisiae YHL001w RPL14B ribosomal protein
YALI1_E00948g	Compare to YALI0E00572g, similar to Saccharomyces cerevisiae YAL044W-A; ancestral locus Anc_7.24, similar to uniprot|Q3E793 Saccharomyces cerevisiae YAL044W-A
YALI1_E00963g	Compare to YALI0E00594g, similar to Saccharomyces cerevisiae SNC1 (YAL030W) and SNC2 (YOR327C); ancestral locus Anc_7.67, highly similar to uniprot|P33328 Saccharomyces cerevisiae YOR327c SNC2 synaptobrevin (v-SNARE) homolog present on post-Golgi vesicles possible transmembrane segment
YALI1_E00986g	Compare to YALI0E00616g, some similarities with YALI0C10670g Yarrowia lipolytica
YALI1_E01019g	Compare to YALI0E00638g, similar to uniprot|Q9TEM3 Emericella nidulans MCSA Methylcitrate synthase precursor
YALI1_E01033g	Compare to YALI0E00660g, similar to uniprot|P38074 Saccharomyces cerevisiae YBR034c HNRNP arginine N-methyltransferase, similar to Saccharomyces cerevisiae HMT1 (YBR034C); ancestral locus Anc_3.233
YALI1_E01057g	Compare to YALI0E00682g, no similarity
YALI1_E01081g	Compare to YALI0E00704g, no similarity
YALI1_E01105g	Compare to YALI0E00726g, highly similar to uniprot|P02557 Saccharomyces cerevisiae YFL037w TUB2 beta-tubulin
YALI1_E01133g	Compare to YALI0E00748g, weakly similar to uniprot|Q12436 Saccharomyces cerevisiae YLR130c ZRT2 low affininty zinc transporter possible transmembrane segments
YALI1_E01159g	Compare to YALI0E00770g, similar to Saccharomyces cerevisiae DIM1 (YPL266W); ancestral locus Anc_6.1, highly similar to uniprot|P41819 Saccharomyces cerevisiae YPL266w DIM1 rRNA (adenine-N6 N6-)- dimethyltransferase
YALI1_E01193g	Compare to YALI0E00792g, no similarity
YALI1_E01213g	Compare to YALI0E00814g, uniprot|Q8J0I8 Yarrowia lipolytica Alternative oxidase possible transmembrane segments
YALI1_E01235g	Compare to YALI0E00836g, similar to Saccharomyces cerevisiae MET2 (YNL277W); ancestral locus Anc_1.68, similar to uniprot|P08465 Saccharomyces cerevisiae YNL277w MET2 homoserine O-acetyltransferase possible transmembrane segment
YALI1_E01251g	Compare to YALI0E00858g, weakly similar to uniprot|Q8BX66 Mus musculus Similar to ribonuclease P protein subunit P40
YALI1_E01286g	Compare to YALI0E00880g, similar to uniprot|O43129 Aspergillus fumigatus MDR2 Multidrug resistance protein 2 possible transmembrane segment
YALI1_E01299g	Compare to YALI0E00902g, weakly similar to uniprot|P39985 Saccharomyces cerevisiae YEL055c POL5 DNA polymerase V, similar to Saccharomyces cerevisiae POL5 (YEL055C); ancestral locus Anc_6.7
YALI1_E01352g	Compare to YALI0E00924g, similar to Saccharomyces cerevisiae PBP2 (YBR233W); ancestral locus Anc_6.139, weakly similar to uniprot|P38151 Saccharomyces cerevisiae YBR233w PBP2 PAB1 binding protein
YALI1_E01392g	Compare to YALI0E00946g, similar to Saccharomyces cerevisiae SWC5 (YBR231C); ancestral locus Anc_6.138, no similarity
YALI1_E01422g	Compare to YALI0E00968g, similar to Saccharomyces cerevisiae YGL114W; ancestral locus Anc_6.137, similar to uniprot|P53134 Saccharomyces cerevisiae YGL114w possible transmembrane segments
YALI1_E01463g	Compare to YALI0E00990g, no similarity
YALI1_E01491g	Compare to YALI0E01012g, no similarity possibly noncoding
YALI1_E01530g	Compare to YALI0E01034g, similar to Saccharomyces cerevisiae MNN11 (YJL183W); ancestral locus Anc_1.156, some similarities with uniprot|Q09174 Schizosaccharomyces pombe SPCC736.04C Alpha-1 2- galactosyltransferase possible transmembrane segment
YALI1_E01589g	Compare to YALI0E01056g, uniprot|Q9HFV0 Yarrowia lipolytica C1-THFS protein C1- tetrahydrofolate synthase precursor mitochondrial
YALI1_E01614g	Compare to YALI0E01078g, similar to Saccharomyces cerevisiae NMT1 (YLR195C); ancestral locus Anc_7.357, similar to uniprot|P14743 Saccharomyces cerevisiae YLR195c NMT1 N-myristoyltransferase (Glycylpeptide N- tetradecanoyltransferase)
YALI1_E01623g	Compare to YALI0E01100g, similar to Saccharomyces cerevisiae PWP1 (YLR196W); ancestral locus Anc_7.356, similar to uniprot|P21304 Saccharomyces cerevisiae YLR196w PWP1
YALI1_E01649g	Compare to YALI0E01122g, highly similar to KLLA0C06446g Kluyveromyces lactis, similar to Saccharomyces cerevisiae PNO1 (YOR145C); ancestral locus Anc_5.482
YALI1_E01657g	Compare to YALI0E01144g, similar to KLLA0B04246g Kluyveromyces lactis possible transmembrane segment, similar to Saccharomyces cerevisiae MDM32 (YOR147W); ancestral locus Anc_5.483
YALI1_E01689g	Compare to YALI0E01166g, some similarities with uniprot|Q8I5S6 Plasmodium falciparum PFL0625C Eukaryotic translation initiation factor 3 subunit 10, similar to Saccharomyces cerevisiae SPP2 (YOR148C); ancestral locus Anc_5.484
YALI1_E01694g	Compare to YALI0E01188g, similar to Saccharomyces cerevisiae SHE9 (YDR393W); ancestral locus Anc_5.485, some similarities with uniprot|Q9P865 Candida albicans She9 protein possible transmembrane segment
YALI1_E01741g	Compare to YALI0E01210g, similar to uniprot|Q6C2I9 Yarrowia lipolytica YALI0F07535g
YALI1_E01778g	Compare to YALI0E01232g, no similarity
YALI1_E01793g	Compare to YALI0E01254g, similar to Saccharomyces cerevisiae HIS5 (YIL116W); ancestral locus Anc_2.252, similar to uniprot|P07172 Saccharomyces cerevisiae YIL116w HIS5 histidinol-phosphate aminotransferase
YALI1_E01798g	Compare to YALI0E01276g, similar to Saccharomyces cerevisiae NUP159 (YIL115C); ancestral locus Anc_2.253, weakly similar to uniprot|P40477 Saccharomyces cerevisiae YIL115c NUP159 nuclear pore protein
YALI1_E01865g	Compare to YALI0E01298g, uniprot|Q8J0I7 Yarrowia lipolytica Putative sterol carrier protein
YALI1_E01885g	Compare to YALI0E01320g, similar to Saccharomyces cerevisiae LST7 (YGR057C); ancestral locus Anc_4.198, weakly similar to uniprot|P53237 Saccharomyces cerevisiae YGR057c LST7 required for amino acid permease transport from the Golgi to the cell surface
YALI1_E01904g	Compare to YALI0E01364g, weakly similar to uniprot|P18851 Saccharomyces cerevisiae YOR212w STE4 GTP-binding protein beta subunit of the pheromone pathway
YALI1_E01935g	Compare to YALI0E01386g, no similarity
YALI1_E01947g	Compare to YALI0E01408g, weakly similar to uniprot|Q9HEL5 Neurospora crassa 12F11.110 putative Phosphoinositide phosphatase
YALI1_E02000g	Compare to YALI0E01430g, some similarities with uniprot|Q04383 Saccharomyces cerevisiae YDR501w PLM2 PLasmid Maintenance mutant shows 2mu-m plasmid instability, similar to Saccharomyces cerevisiae PLM2 (YDR501W) and TOS4 (YLR183C); ancestral locus Anc_1.61
YALI1_E02007g	Compare to YALI0E01452g, highly similar to uniprot|P49166 Saccharomyces cerevisiae YLR185w RPL37A ribosomal protein L37.e or uniprot|P51402 Saccharomyces cerevisiae YDR500c RPL35B ribosomal protein L.37.e, similar to Saccharomyces cerevisiae RPL37B (YDR500C) and RPL37A (YLR185W); ancestral locus Anc_1.62
YALI1_E02046g	Compare to YALI0E01474g, no similarity
YALI1_E02056g	Compare to YALI0E01496g, similar to Saccharomyces cerevisiae EMG1 (YLR186W); ancestral locus Anc_1.64, highly similar to uniprot|Q06287 Saccharomyces cerevisiae YLR186w
YALI1_E02102g	Compare to YALI0E01518g, similar to DEHA0E16456g Debaryomyces hansenii,ancestral locus Anc_1.11
YALI1_E02121g	Compare to YALI0E01540g, no similarity
YALI1_E02143g	Compare to YALI0E01562g, no similarity
YALI1_E02162g	Compare to YALI0E01584g, similar to DEHA0E11000g Debaryomyces hansenii
YALI1_E02183g	Compare to YALI0E01606g, no similarity
YALI1_E02203g	Compare to YALI0E01628g, similar to uniprot|Q04305 Saccharomyces cerevisiae YMR093w and KLLA0F13772g Kluyveromyces lactis and CAGL0J01265g Kluyveromyces lactis
YALI1_E02231g	Compare to YALI0E01650g, no similarity
YALI1_E02239g	Compare to YALI0E01672g, similar to Saccharomyces cerevisiae YMR098C; ancestral locus Anc_2.461, no similarity
YALI1_E02265g	Compare to YALI0E01694g, similar to DEHA0D03091g Debaryomyces hansenii and KLLA0D03388g Kluyveromyces lactis
YALI1_E02287g	Compare to YALI0E01738g, similar to Saccharomyces cerevisiae KTI12 (YKL110C); ancestral locus Anc_2.462, similar to uniprot|Q9P7V4 Schizosaccharomyces pombe SPAC30.02C
YALI1_E02290g	Compare to YALI0E01760g, similar to KLLA0F02904g Kluyveromyces lactis, similar to Saccharomyces cerevisiae MTG1 (YMR097C); ancestral locus Anc_2.463
YALI1_E02317g	Compare to YALI0E01782g, similar to uniprot|Q03532 Saccharomyces cerevisiae YMR290c HAS1 helicase associated with SET1P
YALI1_E02348g	Compare to YALI0E01804g, similar to Saccharomyces cerevisiae PFA5 (YDR459C); ancestral locus Anc_5.579, weakly similar to uniprot|Q03289 Saccharomyces cerevisiae YDR459c
YALI1_E02355g	Compare to YALI0E01826g, similar to uniprot|Q03290 Saccharomyces cerevisiae YDR460w TFB3 TFIIH subunit (transcription/repair factor), similar to Saccharomyces cerevisiae TFB3 (YDR460W); ancestral locus Anc_5.580
YALI1_E02372g	Compare to YALI0E01848g, similar to wi|NCU02935.1 Neurospora crassa NCU02935. 1 unknown function, similar to Saccharomyces cerevisiae CGI121 (YML036W); ancestral locus Anc_5.581
YALI1_E02377g	Compare to YALI0E01870g, similar to Saccharomyces cerevisiae AIP1 (YMR092C); ancestral locus Anc_2.470, similar to uniprot|P46680 Saccharomyces cerevisiae YMR092c AIP1 actin cytoskeleton component
YALI1_E02413g	Compare to YALI0E01892g, similar to uniprot|Q9HEK0 Neurospora crassa 15E11. 10 Probable alpha-1 2-mannosyltransferase possible transmembrane segment
YALI1_E02415g	Compare to YALI0E01914g, similar to Saccharomyces cerevisiae MRPL31 (YKL138C); ancestral locus Anc_2.428, similar to uniprot|Q9UR27 Schizosaccharomyces pombe Putative mitochondrial 60S ribosomal protein L31 precursor
YALI1_E02432g	Compare to YALI0E01936g, similar to Saccharomyces cerevisiae UTP11 (YKL099C); ancestral locus Anc_2.482, similar to uniprot|P34247 Saccharomyces cerevisiae YKL099C U3 small nucleolar RNA-associated protein 11 (U3 snoRNA-associated protein 11)
YALI1_E02438g	Compare to YALI0E01958g, no similarity possibly noncoding, similar to Saccharomyces cerevisiae YKL098W; ancestral locus Anc_2.483
YALI1_E02454g	Compare to YALI0E01980g, weakly similar to uniprot|Q04477 Saccharomyces cerevisiae YMR117c SPC24 spindle pole body protein, similar to Saccharomyces cerevisiae SPC24 (YMR117C); ancestral locus Anc_2.427
YALI1_E02468g	Compare to YALI0E02002g, similar to Saccharomyces cerevisiae YKL137W; ancestral locus Anc_2.429, weakly similar to uniprot|P36064 Saccharomyces cerevisiae YKL137w
YALI1_E02481g	Truncated form of YALI0E02024g, no similarity
YALI1_E02529g	Truncated form of YALI0E02046g, similar to uniprot|Q04439 Saccharomyces cerevisiae YMR109w MYO5 myosin I, similar to Saccharomyces cerevisiae MYO3 (YKL129C) and MYO5 (YMR109W); ancestral locus Anc_2.440
YALI1_E02574g	Truncated form of YALI0E02068g, similar to Saccharomyces cerevisiae YKU80 (YMR106C); ancestral locus Anc_2.444, weakly similar to uniprot|Q7RX73 Neurospora crassa NCU00077.1 and uniprot|Q9HGM8 Schizosaccharomyces pombe SPBC543.03C Putative DNA helicase
YALI1_E02616g	Compare to YALI0E02090g, similar to uniprot|P37012 Saccharomyces cerevisiae YMR105c PGM2 phosphoglucomutase major isoform or uniprot|P33401 Saccharomyces cerevisiae YKL127w PGM1 phosphoglucomutase minor isoform, similar to Saccharomyces cerevisiae PGM1 (YKL127W) and PGM2 (YMR105C); ancestral locus Anc_2.445
YALI1_E02626g	Compare to YALI0E02112g, weakly similar to uniprot|O53294 Mycobacterium tuberculosis monoxygenase (Monooxygenase flavin-binding family) possible transmembrane segment
YALI1_E02648g	Compare to YALI0E02134g, similar to uniprot|P48510 Saccharomyces cerevisiae YMR276w DSK2 ubiquitin-like protein possible transmembrane segment, similar to Saccharomyces cerevisiae DSK2 (YMR276W); ancestral locus Anc_8.837
YALI1_E02678g	Compare to YALI0E02156g, similar to uniprot|Q99271 Saccharomyces cerevisiae YLR138w NHA1 putative Na+/H+ antiporter possible transmembrane segments
YALI1_E02744g	Compare to YALI0E02178g, some similarities with uniprot|Q01165 Magnaporthe grisea Transposase
YALI1_E02767g	Compare to YALI0E02200g, no similarity
YALI1_E02799g	Compare to YALI0E02222g, uniprot|Q70ML1 Yarrowia lipolytica Alpha 1-6 mannosyltransferase involved in secreted protein glycosylation, similar to Saccharomyces cerevisiae VAN1 (YML115C); ancestral locus Anc_8.842
YALI1_E02832g	Compare to YALI0E02244g, similar to uniprot|Q03262 Saccharomyces cerevisiae YMR278w and DEHA0F03432g Debaryomyces hansenii, similar to Saccharomyces cerevisiae YMR278W; ancestral locus Anc_8.840
YALI1_E02850g	Compare to YALI0E02266g, weakly similar to uniprot|Q9P3Q3 Neurospora crassa B24P7.320 Related to cytosolic Cu/Zn superoxide dismutase
YALI1_E02885g	Compare to YALI0E02288g, similar to Saccharomyces cerevisiae RIB1 (YBL033C); ancestral locus Anc_3.319, similar to uniprot|P38066 Saccharomyces cerevisiae YBL033c RIB1 GTP cyclohydrolase II
YALI1_E02906g	Compare to YALI0E02310g, highly similar to uniprot|P40581 Saccharomyces cerevisiae YIR037w HYR1 glutathione peroxidase
YALI1_E02948g	Compare to YALI0E02332g, similar to DEHA0C09174g Debaryomyces hansenii and uniprot|Q08773 Saccharomyces cerevisiae YOR304w ISW2
YALI1_E02959g	Compare to YALI0E02343g, gnl|GLV|YALI0E02343g [Yarrowia lipolytica] similar to uniprot|Q7RYX8 Neurospora crassa hypothetical protein
YALI1_E02966g	Compare to YALI0E02354g, similar to uniprot|P52920 Saccharomyces cerevisiae YGL091c NBP35 nucleotide-binding protein
YALI1_E02996g	Compare to YALI0E02376g, some similarities with uniprot|Q7SAG2 Neurospora crassa NCU06988.1
YALI1_E03039g	Compare to YALI0E02398g, similar to uniprot|CAD70763 Neurospora crassa 80A10. 060 Related to 5-oxoprolinase
YALI1_E03067g	Compare to YALI0E02420g, weakly similar to uniprot|P40557 Saccharomyces cerevisiae YIL005w related to protein disulfide isomerases, similar to Saccharomyces cerevisiae EPS1 (YIL005W); ancestral locus Anc_7.134
YALI1_E03088g	Compare to YALI0E02442g, some similarities with uniprot|Q9URT4 Schizosaccahromyces pombe AMS2 CENP-A multicopy suppressor protein 2, similar to Saccharomyces cerevisiae SPT21 (YMR179W); ancestral locus Anc_6.252
YALI1_E03150g	Compare to YALI0E02508g, no similarity, similar to Saccharomyces cerevisiae XRS2 (YDR369C); ancestral locus Anc_5.435
YALI1_E03158g	Compare to YALI0E02530g, some similarities with uniprot|Q8LG23 Arabidopsis thaliana RNA-binding protein putative
YALI1_E03163g	Compare to YALI0E02552g, similar to uniprot|P38719 Saccharomyces cerevisiae YHR169w DBP8
YALI1_E03183g	Compare to YALI0E02574g, no similarity
YALI1_E03185g	Compare to YALI0E02596g, no similarity possibly noncoding
YALI1_E03220g	Compare to YALI0E02618g, similar to uniprot|P53313 Saccharomyces cerevisiae YGR245c SDA1 required for normal organization of the actin cytoskeleton, similar to Saccharomyces cerevisiae SDA1 (YGR245C); ancestral locus Anc_5.81
YALI1_E03243g	Compare to YALI0E02640g, uniprot|CAD70714 Yarrowia lipolytica Lipase
YALI1_E03300g	Compare to YALI0E02684g, similar to Saccharomyces cerevisiae CIT3 (YPR001W); ancestral locus Anc_8.92, highly similar to uniprot|P00890 Saccharomyces cerevisiae YNR001c CIT1 citrate (si)-synthase mitochondrial possible transmembrane segment
YALI1_E03320g	Compare to YALI0E02706g, similar to Saccharomyces cerevisiae NUP170 (YBL079W) and NUP157 (YER105C); ancestral locus Anc_7.401, similar to uniprot|P38181 Saccharomyces cerevisiae YBL079w NUP170 nuclear pore protein
YALI1_E03387g	Compare to YALI0E02728g, highly similar to DEHA0F08019g Debaryomyces hansenii and uniprot|P49367 Saccharomyces cerevisiae YDR234w LYS4 homoaconitase
YALI1_E03396g	Compare to YALI0E02750g, uniprot|Q8WZL9 Yarrowia lipolytica YALI0E02750g hel putative RNA helicase
YALI1_E03416g	Compare to YALI0E02772g, similar to Saccharomyces cerevisiae GCN5 (YGR252W); ancestral locus Anc_5.65, uniprot|Q8WZM0 Yarrowia lipolytica histone N- acetyltransferase
YALI1_E03439g	Compare to YALI0E02794g, highly similar to uniprot|P32379 Saccharomyces cerevisiae YGR253c PUP2 20S proteasome subunit(alpha5), similar to Saccharomyces cerevisiae PUP2 (YGR253C); ancestral locus Anc_5.64
YALI1_E03449g	Compare to YALI0E02816g, similar to Saccharomyces cerevisiae SPC97 (YHR172W); ancestral locus Anc_5.63, weakly similar to uniprot|Q9Y705 Schizosaccharomyces pombe SPBC365.15 Spindle pole body component alp4 (Altered polarity protein 4)
YALI1_E03476g	Compare to YALI0E02827g, similar to Saccharomyces cerevisiae SHR5 (YOL110W); ancestral locus Anc_3.66,gnl|GLV|YALI0E02827g [Yarrowia lipolytica] weakly similar to uniprot|P41912 Saccharomyces cerevisiae YOL110W SHR5 RAS modification protein
YALI1_E03507g	Compare to YALI0E02838g, no similarity
YALI1_E03510g	Compare to YALI0E02860g, no similarity
YALI1_E03527g	Compare to YALI0E02882g, similar to Saccharomyces cerevisiae FIP1 (YJR093C); ancestral locus Anc_7.464, similar to DEHA0G25817g Debaryomyces hansenii and uniprot|P45976 Saccharomyces cerevisiae YJR093c FIP1 component of pre-mRNA polyadenylation factor PF I possible transmembrane segment
YALI1_E03535g	Compare to YALI0E02904g, similar to Saccharomyces cerevisiae CEG1 (YGL130W); ancestral locus Anc_6.228, similar to uniprot|Q01159 Saccharomyces cerevisiae YGL130w CEG1 mRNA guanylyltransferase (mRNA capping enzyme alpha subunit)
YALI1_E03553g	Compare to YALI0E03014g, weakly similar to uniprot|Q04410 Saccharomyces cerevisiae YDR517w GRH1 Yeast (GR)ASP65 (H)omologue, similar to Saccharomyces cerevisiae GRH1 (YDR517W); ancestral locus Anc_1.32
YALI1_E03584g	Compare to YALI0E03036g, similar to Saccharomyces cerevisiae PDI1 (YCL043C) and EUG1 (YDR518W); ancestral locus Anc_1.31, similar to uniprot|P55059 Humicola insolens Protein disulfide isomerase precursor
YALI1_E03623g	Compare to YALI0E03058g, similar to DEHA0E08833g Debaryomyces hansenii possible transmembrane segment
YALI1_E03651g	Compare to YALI0E03080g, no similarity
YALI1_E03672g	Compare to YALI0E03102g, similar to Saccharomyces cerevisiae MSS11 (YMR164C); ancestral locus Anc_2.346, weakly similar to DEHA0A06006g Debaryomyces hansenii
YALI1_E03723g	Compare to YALI0E03124g, no similarity
YALI1_E03762g	Compare to YALI0E03146g, similar to uniprot|P43123 Saccharomyces cerevisiae YDL103c QRI1 UDP-N-acetylglucosamine pyrophosphorylase, similar to Saccharomyces cerevisiae QRI1 (YDL103C); ancestral locus Anc_2.348
YALI1_E03789g	Compare to YALI0E03168g, similar to uniprot|O42696 Candida albicans CaNIK1 signal transducing histidine kinase
YALI1_E03846g	Compare to YALI0E03190g, similar to Saccharomyces cerevisiae ALG3 (YBL082C); ancestral locus Anc_7.407, weakly similar to uniprot|Q27333 Drosophila melanogaster and uniprot|P38179 Saccharomyces cerevisiae YBL082c RHK1 mannosyltransferase possible transmembrane segments
YALI1_E03870g	Compare to YALI0E03212g, similar to uniprot|P32891 Saccharomyces cerevisiae YDL174c DLD1 D-lactate ferricytochrome C oxidoreductase (D- LCR) possible transmembrane segment
YALI1_E03904g	Compare to YALI0E03234g, similar to Saccharomyces cerevisiae TOK1 (YJL093C); ancestral locus Anc_1.273, some similarities with uniprot|P40310 Saccharomyces cerevisiae YJL093c TOK1 outward-rectifier potassium channel possible transmembrane segment
YALI1_E03918g	Compare to YALI0E03256g, some similarities with uniprot|Q03750 Saccharomyces cerevisiae YML114c transcription initiation factor TFIID subunit 8 (TAF65 TBP Associated Factor 65 K), similar to Saccharomyces cerevisiae TAF8 (YML114C); ancestral locus Anc_8.838
YALI1_E03941g	Compare to YALI0E03278g, similar to Saccharomyces cerevisiae FCP1 (YMR277W); ancestral locus Anc_8.839, similar to uniprot|Q03254 Saccharomyces cerevisiae YMR277w FCP1 TFIIF interacting component of CTD phosphatase and DEHA0F03498g Debaryomyces hansenii possible transmembrane segment
YALI1_E03973g	Compare to YALI0E03300g, weakly similar to uniprot|Q6CG00 Yarrowia lipolytica YALI0B02112g
YALI1_E03999g	Compare to YALI0E03322g, weakly similar to DEHA0A13277g Debaryomyces hansenii,ancestral locus Anc_3.286
YALI1_E04007g	Compare to YALI0E03344g, similar to Saccharomyces cerevisiae YMR244C-A; ancestral locus Anc_8.795, similar to wi|NCU02293.1 Neurospora crassa NCU02293. 1
YALI1_E04023g	Compare to YALI0E03366g, similar to Saccharomyces cerevisiae YBR246W; ancestral locus Anc_6.162, similar to uniprot|P38332 Saccharomyces cerevisiae YBR246w
YALI1_E04033g	Compare to YALI0E03388g, similar to uniprot|Q09196 Schizosaccharomyces pombe Myosin regulatory light chain cdc4
YALI1_E04060g	Compare to YALI0E03410g, similar to Saccharomyces cerevisiae YBR239C; ancestral locus Anc_6.152, weakly similar to uniprot|P38140 Saccharomyces cerevisiae YBR239c
YALI1_E04091g	Compare to YALI0E03432g, similar to uniprot|P46672 Saccharomyces cerevisiae YGL105w G4P1 protein with specific affinity for G4 quadruplex nucleic acids, similar to Saccharomyces cerevisiae ARC1 (YGL105W); ancestral locus Anc_6.153
YALI1_E04143g	Compare to YALI0E03476g, weakly similar to uniprot|Q7RWQ3 Neurospora crassa NCU03554.1
YALI1_E04177g	Compare to YALI0E03498g, similar to Saccharomyces cerevisiae DSN1 (YIR010W); ancestral locus Anc_7.175, weakly similar to DEHA0D15796g Debaryomyces hansenii
YALI1_E04201g	Compare to YALI0E03520g, similar to Saccharomyces cerevisiae TRS20 (YBR254C); ancestral locus Anc_7.176, similar to CA4622|IPF5751 Candida albicans IPF5751 TRAPP subunit of 20 kDa involved in targeting and fusion of ER to golgi transport vesicles
YALI1_E04229g	Compare to YALI0E03542g, no similarity, similar to Saccharomyces cerevisiae TFC8 (YPL007C); ancestral locus Anc_8.82
YALI1_E04278g	Compare to YALI0E03564g, no similarity, similar to Saccharomyces cerevisiae YBR255W; ancestral locus Anc_7.177
YALI1_E04312g	Compare to YALI0E03586g, weakly similar to uniprot|Q9HEM5 Neurospora crassa NCU01320.1
YALI1_E04341g	Compare to YALI0E03608g, no similarity, similar to Saccharomyces cerevisiae VID28 (YIL017C); ancestral locus Anc_7.184
YALI1_E04359g	Compare to YALI0E03630g, similar to Saccharomyces cerevisiae DIS3 (YOL021C); ancestral locus Anc_1.367, similar to uniprot|Q08162 Saccharomyces cerevisiae YOL021c DIS3 3 -5 exoribonuclease required for 3 end formation of 5.8S rRNA
YALI1_E04420g	Compare to YALI0E03674g, similar to uniprot|P43535 Saccharomyces cerevisiae YFR009w GCN20 positive effector of GCN2P, similar to Saccharomyces cerevisiae GCN20 (YFR009W); ancestral locus Anc_1.366
YALI1_E04437g	Compare to YALI0E03696g, no similarity
YALI1_E04499g	Compare to YALI0E03718g, no similarity
YALI1_E04531g	Compare to YALI0E03740g, weakly similar to uniprot|Q12489 Saccharomyces cerevisiae YDL012c
YALI1_E04544g	Compare to YALI0E03762g, no similarity
YALI1_E04575g	Compare to YALI0E03784g, some similarities with DEHA0F19514g Debaryomyces hansenii
YALI1_E04590g	Compare to YALI0E03806g, weakly similar to uniprot|Q04066 Saccharomyces cerevisiae YDR428c, similar to Saccharomyces cerevisiae YDR428C; ancestral locus Anc_5.535
YALI1_E04613g	Compare to YALI0E03828g, similar to uniprot|P78795 Schizosaccharomyces pombe SPBC18H10.03 Probable eukaryotic translation initiation factor 3 RNA-binding subunit (eIF-3 RNA-binding subunit) (eIF3 p33) (Translation initiation factor eIF3 p33 subunit), similar to Saccharomyces cerevisiae TIF35 (YDR429C); ancestral locus Anc_5.536
YALI1_E04629g	Compare to YALI0E03850g, some similarities with uniprot|CAB16599 Schizosaccharomyces pombe SPAC3H5.08C WD repeat protein
YALI1_E04672g	Compare to YALI0E03872g, weakly similar to uniprot|P47159 Saccharomyces cerevisiae YJR124c weak similarity to Staphylococcus multidrug resistance protein singleton
YALI1_E04688g	Compare to YALI0E03894g, some similarities with uniprot|P16639 Saccharomyces cerevisiae YGL017w ATE1 arginyl tRNA transferase, similar to Saccharomyces cerevisiae ATE1 (YGL017W); ancestral locus Anc_4.104
YALI1_E04706g	Compare to YALI0E03916g, no similarity possibly noncoding
YALI1_E04719g	Compare to YALI0E03938g, no similarity
YALI1_E04744g	Compare to YALI0E03960g, similar to Saccharomyces cerevisiae GPI11 (YDR302W); ancestral locus Anc_5.320, weakly similar to uniprot|Q06636 Saccharomyces cerevisiae YDR302w GPI11 GPI11 - protein involved in glycosylphosphatidylinositol (GPI) biosynthesis
YALI1_E04790g	Compare to YALI0E03982g, similar to Saccharomyces cerevisiae CFT1 (YDR301W); ancestral locus Anc_5.319, weakly similar to uniprot|Q06632 Saccharomyces cerevisiae YDR301w CFT1 pre-mRNA 3 -end processing factor CF II
YALI1_E04795g	Compare to YALI0E04004g, no similarity possibly noncoding
YALI1_E04807g	Compare to YALI0E04026g, no similarity possibly noncoding
YALI1_E04823g	Compare to YALI0E04048g, similar to Saccharomyces cerevisiae OAC1 (YKL120W); ancestral locus Anc_2.451, similar to uniprot|P32332 Saccharomyces cerevisiae YKL120w Mitochondrial oxaloacetate transport protein
YALI1_E04845g	Compare to YALI0E04070g, similar to DEHA0G18535g Debaryomyces hansenii
YALI1_E04859g	Compare to YALI0E04092g, similar to Saccharomyces cerevisiae MKT1 (YNL085W); ancestral locus Anc_2.205, weakly similar to uniprot|P40850 Saccharomyces cerevisiae YNL085w MKT1 required for propagation of M2 dsRNA satellite of L-A virus
YALI1_E04909g	Compare to YALI0E04114g, similar to Saccharomyces cerevisiae MUB1 (YMR100W); ancestral locus Anc_2.454, weakly similar to uniprot|Q03162 Saccharomyces cerevisiae YMR100w MUB1 involved in budding
YALI1_E04968g	Compare to YALI0E04136g, some similarities with uniprot|P31244 Saccharomyces cerevisiae YBR114w RAD16 nucleotide excision repair protein
YALI1_E05004g	Compare to YALI0E04169g, similar to uniprot|Q12674 Saccharomyces cerevisiae YMR162c Potential aminophospholipid translocase,gnl|GLV|YALI0E04169g [Yarrowia lipolytica] highly similar to uniprot|Q12674 Saccharomyces cerevisiae YMR162c DNF3 Potential aminophospholipid translocase
YALI1_E05074g	Compare to YALI0E04202g, similar to uniprot|Q96U86 Neurospora crassa B13A5. 050 putative arginase family member
YALI1_E05103g	Compare to YALI0E04224g, similar to uniprot|Q08224 Saccharomyces cerevisiae YOL055c THI20 hydroxymethylpyrimidine phosphate (HMP-P) kinase or uniprot|Q08975 Saccharomyces cerevisiae YPL258c THI21
YALI1_E05119g	Compare to YALI0E04246g, similar to uniprot|P53960 Saccharomyces cerevisiae YNL040w, similar to Saccharomyces cerevisiae YNL040W
YALI1_E05145g	Compare to YALI0E04268g, no similarity possibly noncoding
YALI1_E05158g	Compare to YALI0E04290g, no similarity
YALI1_E05180g	Compare to YALI0E04312g, weakly similar to uniprot|O74390 Schizosaccharomyces pombe SPBC28E12.06C Putative transport protein, similar to Saccharomyces cerevisiae BPH1 (YCR032W); ancestral locus Anc_1.144
YALI1_E05261g	Compare to YALI0E04334g, no similarity possibly noncoding
YALI1_E05285g	Compare to YALI0E04356g, some similarities with uniprot|P38285 Saccharomyces cerevisiae YBR158w CST13
YALI1_E05309g	Compare to YALI0E04378g, similar to DEHA0D10263g Debaryomyces hansenii
YALI1_E05329g	Compare to YALI0E04400g, similar to Saccharomyces cerevisiae SSY5 (YJL156C); ancestral locus Anc_1.191, uniprot|Q8WZL2 Yarrowia lipolytica Ssy5 protein part of an extracellular amino acid sensor
YALI1_E05353g	Compare to YALI0E04422g, similar to uniprot|Q6C5F8 Yarrowia lipolytica YALI0E18458g
YALI1_E05390g	Compare to YALI0E04444g, similar to uniprot|Q12149 Saccharomyces cerevisiae YOR001w RRP6, similar to Saccharomyces cerevisiae RRP6 (YOR001W); ancestral locus Anc_6.25
YALI1_E05403g	Compare to YALI0E04466g, some similarities with DEHA0E21846g Debaryomyces hansenii
YALI1_E05416g	Compare to YALI0E04488g, weakly similar to uniprot|Q96U38 Neurospora crassa B2J23.080
YALI1_E05446g	Compare to YALI0E04510g, similar to uniprot|Q9URL7 Candida albicans PTR2 Peptide transport protein
YALI1_E05489g	Compare to YALI0E04532g, no similarity
YALI1_E05538g	Compare to YALI0E04554g, no similarity, similar to Saccharomyces cerevisiae YKL047W; ancestral locus Anc_2.571
YALI1_E05576g	Compare to YALI0E04576g, weakly similar to uniprot|P33418 Saccharomyces cerevisiae YKL205w LOS1 pre-tRNA splicing protein, similar to Saccharomyces cerevisiae LOS1 (YKL205W); ancestral locus Anc_1.519
YALI1_E05584g	Compare to YALI0E04598g, no similarity
YALI1_E05599g	Compare to YALI0E04620g, similar to Saccharomyces cerevisiae PEX4 (YGR133W); ancestral locus Anc_3.495, weakly similar to uniprot|P29340 Saccharomyces cerevisiae YGR133w PAS2 E2 ubiquitin-conjugating enzyme - peroxin and uniprot|P15731 Saccharomyces cerevisiae YBR082c UBC4 E2 ubiquitin-conjugating enzyme
YALI1_E05602g	Compare to YALI0E04642g, similar to uniprot|Q12461 Saccharomyces cerevisiae YPL152w RRD2
YALI1_E05630g	Compare to YALI0E04664g, no similarity possibly noncoding
YALI1_E05645g	Compare to YALI0E04675g, similar to uniprot|Q08649 Saccharomyces cerevisiae YOR244w ESA1 histone acetyltransferase
YALI1_E05664g	Compare to YALI0E04697g, similar to uniprot|Q12417 Saccharomyces cerevisiae YPL151c Pre-mRNA splicing factor PRP46
YALI1_E05668g	Truncated form of YALI0E04719g, similar to uniprot|P40961 Saccharomyces cerevisiae YGR132c PHB1 prohibitin antiproliferative protein, similar to Saccharomyces cerevisiae PHB1 (YGR132C); ancestral locus Anc_3.494
YALI1_E05681g	Compare to YALI0E04741g, similar to Saccharomyces cerevisiae RMP1 (YLR145W); ancestral locus Anc_8.353, no similarity
YALI1_E05701g	Compare to YALI0E04763g, similar to Saccharomyces cerevisiae SPE4 (YLR146C); ancestral locus Anc_8.354, similar to uniprot|Q12074 Saccharomyces cerevisiae YPR069c SPE3 putrescine aminopropyltransferase (spermidine synthase) or uniprot|Q12455 Saccharomyces cerevisiae YLR146c SPE4 spermine synthase
YALI1_E05709g	Compare to YALI0E04785g, similar to Saccharomyces cerevisiae TRM82 (YDR165W); ancestral locus Anc_8.355, similar to DEHA0E18414g Debaryomyces hansenii
YALI1_E05731g	Compare to YALI0E04807g, similar to Saccharomyces cerevisiae HMG2 (YLR450W) and HMG1 (YML075C); ancestral locus Anc_4.343, similar to uniprot|P12683 Saccharomyces cerevisiae YML075c HMG1 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1
YALI1_E05767g	Compare to YALI0E04829g, similar to Saccharomyces cerevisiae RRI1 (YDL216C); ancestral locus Anc_2.67, similar to uniprot|AAH46753 Mus musculus COP9 (Constitutive photomorphogenic) subunit 5
YALI1_E05779g	Compare to YALI0E04851g, similar to uniprot|Q6C6S0 Yarrowia lipolytica YALI0E06787g
YALI1_E05811g	Compare to YALI0E04873g, weakly similar to uniprot|O59762 Schizosaccharomyces pombe possible guanine nucleotide- binding protein, similar to Saccharomyces cerevisiae YNL187W; ancestral locus Anc_2.66
YALI1_E05833g	Compare to YALI0E04939g, similar to uniprot|P25345 Saccharomyces cerevisiae YCR024c asn-tRNA synthetase mitochondrial, similar to Saccharomyces cerevisiae SLM5 (YCR024C); ancestral locus Anc_1.449
YALI1_E05854g	Compare to YALI0E04961g, no similarity
YALI1_E05866g	Compare to YALI0E04983g, some similarities with uniprot|CAD62574 Schizosaccharomyces pombe Anaphase-promoting complex (APC) required for cyclin degradation possibly required for metaphase-anaphase transition cullin family, similar to Saccharomyces cerevisiae APC2 (YLR127C); ancestral locus Anc_8.321
YALI1_E05907g	Compare to YALI0E05005g, similar to uniprot|P38707 Saccharomyces cerevisiae YHR019c DED81 asparaginyl-tRNA-synthetase, similar to Saccharomyces cerevisiae DED81 (YHR019C); ancestral locus Anc_1.353
YALI1_E05929g	Compare to YALI0E05027g, similar to uniprot|P38708 Saccharomyces cerevisiae Putative prolyl-tRNA synthetase YHR020W, similar to Saccharomyces cerevisiae YHR020W; ancestral locus Anc_1.352
YALI1_E05963g	Compare to YALI0E05049g, weakly similar to uniprot|P38635 Saccharomyces cerevisiae YFR025c HIS2 histidinol phosphatase, similar to Saccharomyces cerevisiae HIS2 (YFR025C); ancestral locus Anc_1.351
YALI1_E05972g	Compare to YALI0E05071g, similar to Saccharomyces cerevisiae CTF8 (YHR191C); ancestral locus Anc_4.356, weakly similar to uniprot|P38877 Saccharomyces cerevisiae YHR191c CFT8
YALI1_E05975g	Compare to YALI0E05093g, similar to Saccharomyces cerevisiae EAF5 (YEL018W); ancestral locus Anc_1.447, no similarity
YALI1_E05994g	Compare to YALI0E05115g, similar to Saccharomyces cerevisiae TIM9 (YEL020W-A); ancestral locus Anc_1.452, similar to uniprot|O74700 Saccharomyces cerevisiae YEL020wa TIM9 essential subunit of the TIM22-complex for mitochondrial protein import
YALI1_E06015g	Compare to YALI0E05137g, similar to uniprot|P28834 Saccharomyces cerevisiae YNL037c IDH1 isocitrate dehydrogenase (NAD+) subunit 1 mitochondrial, similar to Saccharomyces cerevisiae IDH1 (YNL037C); ancestral locus Anc_2.278
YALI1_E06028g	Compare to YALI0E05159g, no similarity possibly noncoding
YALI1_E06031g	Compare to YALI0E05181g, similar to Saccharomyces cerevisiae FMC1 (YIL098C); ancestral locus Anc_2.277, weakly similar to uniprot|P40491 Saccharomyces cerevisiae YIL098c FMC1 Formation of Mitochondrial Cytochromes
YALI1_E06056g	Compare to YALI0E05203g, similar to Saccharomyces cerevisiae SGA1 (YIL099W); ancestral locus Anc_2.276, some similarities with uniprot|P08019 Saccharomyces cerevisiae YIL099w SGA1 sporulation specific glucan 1 4- alpha-glucosidase
YALI1_E06068g	Compare to YALI0E05225g, weakly similar to uniprot|Q01080 Saccharomyces cerevisiae YNL248c RPA49 DNA-directed RNA polymerase A (I) chain, similar to Saccharomyces cerevisiae RPA49 (YNL248C); ancestral locus Anc_1.112
YALI1_E06109g	Compare to YALI0E05247g, similar to uniprot|P32319 Saccharomyces cerevisiae YBL017c PEP1 vacuolar protein sorting/targeting protein
YALI1_E06119g	Compare to YALI0E05269g, similar to Saccharomyces cerevisiae SFT1 (YKL006C-A); ancestral locus Anc_2.504, similar to uniprot|P43682 Saccharomyces cerevisiae YKL006ca SFT1 SNARE-like protein
YALI1_E06137g	Compare to YALI0E05291g, similar to uniprot|Q9P5K9 Neurospora crassa B23L21. 200 Probable F-actin capping protein alpha subunit, similar to Saccharomyces cerevisiae CAP1 (YKL007W); ancestral locus Anc_2.503
YALI1_E06158g	Compare to YALI0E05313g, similar to uniprot|Q08777 Saccharomyces cerevisiae YOR306c
YALI1_E06178g	Compare to YALI0E05335g, highly similar to uniprot|P42023 Pneumocystis carinii Actin II (Centractin-like protein)
YALI1_E06212g	Compare to YALI0E05357g, no similarity
YALI1_E06220g	Compare to YALI0E05379g, no similarity possibly noncoding
YALI1_E06280g	Compare to YALI0E05401g, weakly similar to uniprot|P33202 Saccharomyces cerevisiae YKL010c SOS1, similar to Saccharomyces cerevisiae UFD4 (YKL010C); ancestral locus Anc_2.497
YALI1_E06317g	Compare to YALI0E05423g, some similarities with uniprot|Q8X014 Neurospora crassa B23D6.090
YALI1_E06331g	Compare to YALI0E05445g, weakly similar to DEHA0E02409g Debaryomyces hansenii,ancestral locus Anc_8.3
YALI1_E06355g	Compare to YALI0E05467g, similar to uniprot|Q88LQ9 Pseudomonas putida PP1870 Thiopurine s-methyltransferase
YALI1_E06365g	Compare to YALI0E05489g, similar to Saccharomyces cerevisiae RGD2 (YFL047W); ancestral locus Anc_8.4, weakly similar to uniprot|P43556 Saccharomyces cerevisiae YFL047w
YALI1_E06406g	Compare to YALI0E05511g, no similarity
YALI1_E06441g	Compare to YALI0E05533g, uniprot|P41929 Lysine acetyltransferase, similar to Saccharomyces cerevisiae YGR111W; ancestral locus Anc_3.456
YALI1_E06484g	Compare to YALI0E05555g, some similarities with uniprot|O74262 Neurospora crassa SRE Siderophore regulation protein
YALI1_E06535g	Compare to YALI0E05577g, highly similar to uniprot|Q6C1S5 Yarrowia lipolytica YALI0F13761g
YALI1_E06573g	Compare to YALI0E05599g, similar to uniprot|Q9Y7G7 Neurospora crassa NDH64 64 kDa mitochondrial NADH dehydrogenase
YALI1_E06583g	Compare to YALI0E05621g, similar to uniprot|Q9URW6 Schizosaccharomyces pombe SPAPJ696.02 SH3 domain protein, similar to Saccharomyces cerevisiae LSB3 (YFR024C-A) and YSC84 (YHR016C); ancestral locus Anc_1.356
YALI1_E06616g	Compare to YALI0E05643g, similar to uniprot|Q9WYD3 Thermotoga maritima TM0297 Oxidoreductase short chain dehydrogenase/reductase
YALI1_E06664g	Compare to YALI0E05665g, some similarities with uniprot|P43549 Saccharomyces cerevisiae YFL054c
YALI1_E06697g	Compare to YALI0E05687g, no similarity
YALI1_E06712g	Compare to YALI0E05709g, weakly similar to DEHA0B16577g Debaryomyces hansenii
YALI1_E06737g	Compare to YALI0E05731g, weakly similar to DEHA-IPF3451.1 Debaryomyces hansenii DEHA0C16368g putative oxydo-reductase
YALI1_E06759g	Compare to YALI0E05753g, similar to uniprot|P08524 Saccharomyces cerevisiae YJL167w ERG20 farnesyl-pyrophosphate synthetase, similar to Saccharomyces cerevisiae ERG20 (YJL167W); ancestral locus Anc_1.176
YALI1_E06843g	Compare to YALI0E05775g, no similarity
YALI1_E06882g	Compare to YALI0E05797g, similar to Saccharomyces cerevisiae EBP2 (YKL172W); ancestral locus Anc_1.175, similar to uniprot|P36049 Saccharomyces cerevisiae YKL172w EBP2 required for pre-rRNA processing and ribosomal subunit assembly
YALI1_E06946g	Compare to YALI0E05819g, weakly similar to uniprot|P08640 Saccharomyces cerevisiae YIR019c STA1 extracellular alpha-1 4-glucan glucosidase
YALI1_E07019g	Compare to YALI0E05841g, weakly similar to uniprot|O93846 Magnaporthe grisea PATH531 Pathogenicity protein
YALI1_E07040g	Compare to YALI0E05863g, similar to Saccharomyces cerevisiae MGM101 (YJR144W); ancestral locus Anc_4.380, similar to uniprot|P32787 Saccharomyces cerevisiae YJR144w MGM101 mitochondrial genome maintenance protein
YALI1_E07065g	Compare to YALI0E05885g, no similarity possibly noncoding
YALI1_E07099g	Compare to YALI0E05907g, similar to Saccharomyces cerevisiae YOR084W; ancestral locus Anc_5.693, weakly similar to uniprot|Q9P5J4 Neurospora crassa B23L21.350
YALI1_E07121g	Compare to YALI0E05929g, similar to uniprot|P46971 Saccharomyces cerevisiae YJR143c PMT4 dolichyl-phosphate-mannose--protein O- mannosyl transferase
YALI1_E07153g	Compare to YALI0E05951g, weakly similar to uniprot|Q9K3W1 Streptomyces coelicolor SCO4383 4-coumarate:CoA ligase
YALI1_E07178g	Compare to YALI0E05973g, similar to uniprot|P12866 Saccharomyces cerevisiae YKL209c STE6 ATP-binding cassette transporter protein
YALI1_E07234g	Compare to YALI0E05995g, weakly similar to uniprot|Q99156 Yarrowia lipolytica LIP1 Lipase 1 precursor
YALI1_E07302g	Compare to YALI0E06017g, similar to uniprot|P22515 Saccharomyces cerevisiae YKL210w UBA1 E1-like (ubiquitin-activating) enzyme
YALI1_E07306g	Compare to YALI0E06039g, similar to Saccharomyces cerevisiae MTR3 (YGR158C); ancestral locus Anc_4.63, similar to uniprot|P48240 Saccharomyces cerevisiae YGR158c MTR3 involved in mRNA transport and DEHA0A13343g Debaryomyces hansenii
YALI1_E07347g	Compare to YALI0E06061g, similar to uniprot|O74787 Schizosaccharomyces pombe SPBC26H8.03 Phosphatidylethanolamine N-methyltransferase, similar to Saccharomyces cerevisiae CHO2 (YGR157W); ancestral locus Anc_4.64
YALI1_E07361g	Compare to YALI0E06083g, similar to uniprot|P53285 Saccharomyces cerevisiae YGR141w, similar to Saccharomyces cerevisiae VPS62 (YGR141W) and YPR157W; ancestral locus Anc_3.505
YALI1_E07409g	Compare to YALI0E06105g, no similarity
YALI1_E07440g	Compare to YALI0E06127g, no similarity possibly noncoding
YALI1_E07471g	Compare to YALI0E06149g, similar to uniprot|P40566 Saccharomyces cerevisiae YIR007w, similar to Saccharomyces cerevisiae YIR007W; ancestral locus Anc_7.172
YALI1_E07479g	Compare to YALI0E06171g, some similarities with uniprot|P09880 Saccharomyces cerevisiae YJL087c TRL1 tRNA ligase
YALI1_E07506g	Compare to YALI0E06193g, similar to uniprot|P24521 Saccharomyces cerevisiae YMR220w ERG8 phosphomevalonate kinase, similar to Saccharomyces cerevisiae ERG8 (YMR220W); ancestral locus Anc_8.737
YALI1_E07508g	Compare to YALI0E06215g, similar to DEHA0G19305g Debaryomyces hansenii and uniprot|Q00873 Saccharomyces cerevisiae YKL087c CYT2 holocytochrome-c1 synthase
YALI1_E07522g	Compare to YALI0E06237g, similar to uniprot|P87108 Saccharomyces cerevisiae YHR005ca TIM10 subunit of the TIM22-complex
YALI1_E07535g	Compare to YALI0E06347g, similar to Saccharomyces cerevisiae EMP47 (YFL048C) and EMP46 (YLR080W); ancestral locus Anc_8.2, weakly similar to uniprot|Q7RXP6 Neurospora crassa NCU00162.1
YALI1_E07571g	Compare to YALI0E06369g, similar to Saccharomyces cerevisiae SWP82 (YFL049W); ancestral locus Anc_8.1, some similarities with uniprot|O94522 Schizosaccharomyces pombe SPCC1281.05 Possible involvement in nuclear protein localisation
YALI1_E07578g	Compare to YALI0E06391g, similar to uniprot|Q12226 Saccharomyces cerevisiae YLL063c AYT1, similar to Saccharomyces cerevisiae AYT1 (YLL063C)
YALI1_E07601g	Compare to YALI0E06413g, weakly similar to uniprot|P36024 Saccharomyces cerevisiae YKR072c SIS2 involved in cell cycle-specific gene expression
YALI1_E07657g	Compare to YALI0E06435g, similar to Saccharomyces cerevisiae NOT5 (YPR072W); ancestral locus Anc_3.370, weakly similar to uniprot|P06102 Saccharomyces cerevisiae YIL038c NOT3 general negative regulator of transcription subunit 3 and DEHA0F04422g Debaryomyces hansenii and KLLA0B09196g Kluyveromyces lactis
YALI1_E07676g	Compare to YALI0E06457g, similar to uniprot|P07702 Saccharomyces cerevisiae YBR115c LYS2 L-aminoadipate-semialdehyde dehydrogenase large subunit, similar to Saccharomyces cerevisiae LYS2 (YBR115C); ancestral locus Anc_3.369
YALI1_E07744g	Compare to YALI0E06479g, similar to uniprot|P23254 Saccharomyces cerevisiae YPR074c TKL1 transketolase 1 or uniprot|P33315 Saccharomyces cerevisiae YBR117c TKL2 transketolase 2, similar to Saccharomyces cerevisiae TKL2 (YBR117C) and TKL1 (YPR074C); ancestral locus Anc_3.372
YALI1_E07790g	Compare to YALI0E06501g, similar to uniprot|P12688 Saccharomyces cerevisiae YKL126w YPK1 ser/thr-specific protein kinase
YALI1_E07818g	Compare to YALI0E06519g, weakly similar to uniprot|P34244 Saccharomyces cerevisiae YKL101w HSL1 ser/thr protein kinase coupling septin ring assembly to cell cycle progression
YALI1_E07874g	Compare to YALI0E06545g, similar to Saccharomyces cerevisiae JJJ3 (YJR097W); ancestral locus Anc_1.113, similar to CAGL0C04565g Candida glabrata
YALI1_E07899g	Compare to YALI0E06567g, similar to uniprot|O74935 Yarrowia lipolytica YlPOX2 - YALI0F10857g Acyl-CoA oxidase 2
YALI1_E07920g	Compare to YALI0E06589g, similar to uniprot|Q6C1D8 Yarrowia lipolytica YALI0F17182g
YALI1_E07950g	Compare to YALI0E06611g, no similarity
YALI1_E07984g	Compare to YALI0E06633g, no similarity
YALI1_E08021g	Compare to YALI0E06655g, similar to uniprot|P32794 Saccharomyces cerevisiae YLR397c AFG2
YALI1_E08035g	Compare to YALI0E06677g, no similarity
YALI1_E08043g	Compare to YALI0E06699g, no similarity
YALI1_E08071g	Compare to YALI0E06721g, some similarities with uniprot|P38206 Saccharomyces cerevisiae YBL020w RFT1 nuclear division protein, similar to Saccharomyces cerevisiae RFT1 (YBL020W); ancestral locus Anc_8.166
YALI1_E08104g	Compare to YALI0E06743g, some similarities with uniprot|Q8NJ06 Neurospora crassa NCU04633.1, similar to Saccharomyces cerevisiae HRD1 (YOL013C); ancestral locus Anc_6.45
YALI1_E08114g	Compare to YALI0E06765g, similar to uniprot|P38205 Saccharomyces cerevisiae YBL024w NCL1 tRNA (cytosine-5-)-methyltransferase
YALI1_E08157g	Compare to YALI0E06787g, similar to uniprot|Q6C702 Yarrowia lipolytica YALI0E04851g
YALI1_E08176g	Compare to YALI0E06809g, some similarities with uniprot|Q12057 Saccharomyces cerevisiae YOR104w, similar to Saccharomyces cerevisiae PIN2 (YOR104W); ancestral locus Anc_2.179
YALI1_E08198g	Compare to YALI0E06831g, uniprot|O74211 Yarrowia lipolytica Peroxin Peroxisome biogenesis factor 20
YALI1_E08211g	Compare to YALI0E06853g, similar to Saccharomyces cerevisiae YGR235C; ancestral locus Anc_5.92, weakly similar to DEHA0E08393g Kluyveromyces lactis
YALI1_E08228g	Compare to YALI0E06875g, no similarity possibly noncoding
YALI1_E08253g	Compare to YALI0E06897g, similar to uniprot|P53320 Saccharomyces cerevisiae YGR257c, similar to Saccharomyces cerevisiae MTM1 (YGR257C); ancestral locus Anc_5.53
YALI1_E08271g	Compare to YALI0E06919g, similar to uniprot|P87141 Schizosaccharomyces pombe SPAC57A7.11 WD-repeat protein mip1, similar to Saccharomyces cerevisiae KOG1 (YHR186C); ancestral locus Anc_5.49
YALI1_E08334g	Compare to YALI0E06941g, similar to uniprot|P53070 Saccharomyces cerevisiae YGL236c MTO1, similar to Saccharomyces cerevisiae MTO1 (YGL236C); ancestral locus Anc_3.558
YALI1_E08351g	Compare to YALI0E07051g, similar to DEHA0E05104g Debaryomyces hansenii similarity to kynurenine aminotransferase and glutamine- phenylpyruvate transaminase
YALI1_E08382g	Compare to YALI0E07073g, similar to Saccharomyces cerevisiae BNA6 (YFR047C); ancestral locus Anc_3.563, highly similar to uniprot|P43619 Saccharomyces cerevisiae YFR047c putative nicotinate-nucleotide pyrophosphorylase [carboxylating]
YALI1_E08440g	Compare to YALI0E07095g, similar to DEHA0C07986g Debaryomyces hansenii
YALI1_E08452g	Compare to YALI0E07117g, similar to Saccharomyces cerevisiae DOC1 (YGL240W); ancestral locus Anc_3.562, similar to uniprot|Q9XHV6 Oryza sativa 10A19I.10 protein and uniprot|P53068 Saccharomyces cerevisiae YGL240w DOC1 component of the anaphase promoting complex
YALI1_E08472g	Compare to YALI0E07139g, similar to Saccharomyces cerevisiae CSE1 (YGL238W); ancestral locus Anc_3.561, similar to uniprot|P33307 Saccharomyces cerevisiae YGL238w CSE1 importin-beta-like protein
YALI1_E08530g	Compare to YALI0E07161g, weakly similar to uniprot|Q06667 Saccharomyces cerevisiae YDR315c IPK1 inositol 1 3 4 5 6- pentakisphosphate 2-kinase (IP5 2-kinase), similar to Saccharomyces cerevisiae IPK1 (YDR315C); ancestral locus Anc_5.342
YALI1_E08545g	Compare to YALI0E07183g, similar to uniprot|Q04062 Saccharomyces cerevisiae YDR427w RPN9 subunit of the regulatory particle of the proteasome
YALI1_E08575g	Compare to YALI0E07205g, similar to uniprot|P32837 Saccharomyces cerevisiae YDL210w UGA4 GABA-specific high-affinity permease
YALI1_E08620g	Compare to YALI0E07271g, similar to uniprot|P32528 Saccharomyces cerevisiae YBR208c DUR1_2 urea amidolyase
YALI1_E08689g	Compare to YALI0E07293g, similar to uniprot|Q6CDB7 Yarrowia lipolytica YALI0C01925g
YALI1_E08709g	Compare to YALI0E07315g, similar to Saccharomyces cerevisiae YEL020C; ancestral locus Anc_1.450, similar to uniprot|P39994 Saccharomyces cerevisiae YEL020c
YALI1_E08725g	Compare to YALI0E07337g, no similarity
YALI1_E08782g	Compare to YALI0E07381g, similar to uniprot|O74916 Schizosaccharomyces pombe Putative acetylornithine deacetylase
YALI1_E08828g	Compare to YALI0E07425g, similar to uniprot|Q12754 Saccharomyces cerevisiae YPL012w hypothetical protein, similar to Saccharomyces cerevisiae RRP12 (YPL012W); ancestral locus Anc_8.78
YALI1_E08853g	Converted to coding from non-coding YALI0E07447g, similar to uniprot|CAD70921 Neurospora crassa 7F4. 170 Related to acid sphingomyelinase pseudogene
YALI1_E08861g	Converted to coding from non-coding YALI0E07447g, similar to uniprot|CAD70921 Neurospora crassa 7F4. 170 Related to acid sphingomyelinase pseudogene
YALI1_E08900g	Compare to YALI0E07491g, weakly similar to uniprot|P53086 Saccharomyces cerevisiae YGL216w KIP3 kinesin-related protein required for nuclear migration
YALI1_E08915g	Compare to YALI0E07513g, weakly similar to DEHA0D18975g Debaryomyces hansenii
YALI1_E08937g	Compare to YALI0E07535g, similar to uniprot|P00812 Saccharomyces cerevisiae YPL111w CAR1 arginase singleton, similar to Saccharomyces cerevisiae CAR1 (YPL111W); ancestral locus Anc_8.600
YALI1_E08997g	Compare to YALI0E07557g, weakly similar to uniprot|P08640 Saccharomyces cerevisiae YIR019c STA1 extracellular alpha-1 4-glucan glucosidase
YALI1_E09051g	Truncated form of YALI0E07579g, no similarity
YALI1_E09082g	Compare to YALI0E07601g, weakly similar to uniprot|P32873 Saccharomyces cerevisiae YPL115c BEM3 GTPase-activating protein for CDC42P and RHO1P, similar to Saccharomyces cerevisiae BEM3 (YPL115C); ancestral locus Anc_8.605
YALI1_E09128g	Compare to YALI0E07623g, no similarity
YALI1_E09190g	Converted to coding from non-coding YALI0E07645g, similar to uniprot|P35207 Saccharomyces cerevisiae YLR398c SKI2 antiviral protein and putative helicase in frame stop codons and frameshifts
YALI1_E09241g	Compare to YALI0E07744g, similar to Saccharomyces cerevisiae ATH1 (YPR026W); ancestral locus Anc_7.433, weakly similar to uniprot|P48016 Saccharomyces cerevisiae YPR026w ATH1 acid trehalase vacuolar
YALI1_E09329g	Truncated form of YALI0E07766g, similar to uniprot|P07246 Saccharomyces cerevisiae YMR083w ADH3 alcohol dehydrogenase III
YALI1_E09357g	Compare to YALI0E07788g, similar to Saccharomyces cerevisiae DFG10 (YIL049W); ancestral locus Anc_7.235, weakly similar to DEHA0B09856g Debaryomyces hansenii
YALI1_E09395g	Compare to YALI0E07810g, weakly similar to uniprot|Q890E1 Lactobacillus plantarum LP_0082 zinc-binding oxidoreductase
YALI1_E09438g	Compare to YALI0E07832g, weakly similar to uniprot|Q01589 Saccharomyces cerevisiae YDR077w SED1 abundant cell surface glycoprotein, similar to Saccharomyces cerevisiae SED1 (YDR077W) and SPI1 (YER150W); ancestral locus Anc_8.201
YALI1_E09539g	Compare to YALI0E07898g, weakly similar to uniprot|P35190 Saccharomyces cerevisiae YGL215w CLG1 cyclin-like protein, similar to Saccharomyces cerevisiae CLG1 (YGL215W); ancestral locus Anc_3.527
YALI1_E09568g	Compare to YALI0E07920g, similar to DEHA0B03696g Debaryomyces hansenii
YALI1_E09615g	Compare to YALI0E07942g, similar to Saccharomyces cerevisiae MIG3 (YER028C) and MIG2 (YGL209W); ancestral locus Anc_3.518, weakly similar to CA1593|CaMIG1 Candida albicans CaMIG1 transcriptional regulator
YALI1_E09652g	Compare to YALI0E07964g, no similarity possibly noncoding
YALI1_E09672g	Compare to YALI0E07986g, no similarity, similar to Saccharomyces cerevisiae DSS4 (YPR017C); ancestral locus Anc_8.119
YALI1_E09705g	Compare to YALI0E08008g, weakly similar to uniprot|Q08294 Saccharomyces cerevisiae YOL155c
YALI1_E09750g	Compare to YALI0E08030g, similar to uniprot|P40416 Saccharomyces cerevisiae YMR301c ATM1 ATP-binding cassette transporter protein mitochondrial
YALI1_E09769g	Compare to YALI0E08052g, weakly similar to DEHA0E14619g Debaryomyces hansenii
YALI1_E09779g	Compare to YALI0E08074g, some similarities with DEHA0F23397g Debaryomyces hansenii
YALI1_E09817g	Compare to YALI0E08085g, gnl|GLV|YALI0E08085g [Yarrowia lipolytica] weakly similar to uniprot|Q6BRR7 Debaryomyces hansenii
YALI1_E09884g	Compare to YALI0E08096g, weakly similar to uniprot|P53746 Saccharomyces cerevisiae YNR060w FRE4 Ferric reductase transmembrane component 4 [Precursor]
YALI1_E09924g	Compare to YALI0E08162g, weakly similar to CA0775|CaIFK2 Candida albicans
YALI1_E09972g	Compare to YALI0E08184g, weakly similar to uniprot|P40096 Saccharomyces cerevisiae YER159c NCB1 functional homolog of human NC2alpha
YALI1_E10013g	Compare to YALI0E08206g, weakly similar to uniprot|P47139 Saccharomyces cerevisiae YJR098c, similar to Saccharomyces cerevisiae YJR098C; ancestral locus Anc_1.114
YALI1_E10055g	Compare to YALI0E08228g, no similarity
YALI1_E10067g	Compare to YALI0E08250g, no similarity
YALI1_E10134g	Compare to YALI0E08316g, no similarity
YALI1_E10161g	Compare to YALI0E08338g, similar to Saccharomyces cerevisiae ATG2 (YNL242W); ancestral locus Anc_2.1, similar to uniprot|P53855 Saccharomyces cerevisiae YNL242w SPO72 required for sporulation
YALI1_E10210g	Compare to YALI0E08360g, similar to DEHA0A08206g Debaryomyces hansenii
YALI1_E10233g	Compare to YALI0E08382g, no similarity
YALI1_E10247g	Compare to YALI0E08392g, gnl|GLV|YALI0E08392g [Yarrowia lipolytica] similar to uniprot|P41927 Yarrowia lipolytica Metallothionein-I MTLI
YALI1_E10290g	Compare to YALI0E08448g, similar to Saccharomyces cerevisiae LTV1 (YKL143W); ancestral locus Anc_5.249, weakly similar to uniprot|P34078 Saccharomyces cerevisiae YKL143w LTV1 low-temperature viability protein
YALI1_E10295g	Compare to YALI0E08470g, no similarity
YALI1_E10320g	Compare to YALI0E08492g, uniprot|Q872L6|emb|CAD70713 Yarrowia lipolytica YALI0E08492g LIP4 Lipase (EC 3.1.1.3)
YALI1_E10358g	Compare to YALI0E08514g, weakly similar to CAGL0I10901g Candida glabrata
YALI1_E10364g	Compare to YALI0E08536g, similar to uniprot|P53206 Saccharomyces cerevisiae YGR012w putative cysteine synthase
YALI1_E10417g	Compare to YALI0E08558g, no similarity
YALI1_E10443g	Compare to YALI0E08580g, weakly similar to uniprot|P53835 Saccharomyces cerevisiae YNL279w PRM1 coiled-coil protein of unknown function, similar to Saccharomyces cerevisiae PRM1 (YNL279W); ancestral locus Anc_1.65
YALI1_E10455g	Compare to YALI0E08602g, weakly similar to uniprot|P17558 Saccharomyces cerevisiae YOR158w PET123 ribosomal protein mitochondrial, similar to Saccharomyces cerevisiae PET123 (YOR158W); ancestral locus Anc_5.505
YALI1_E10492g	Compare to YALI0E08617g, weakly similar to uniprot|P41807 Saccharomyces cerevisiae YPR036w VMA13 H+-ATPase V1 domain 54 KD subunit vacuolar, similar to Saccharomyces cerevisiae VMA13 (YPR036W); ancestral locus Anc_7.450
YALI1_E10500g	Compare to YALI0E08646g, some similarities with uniprot|P46964 Saccharomyces cerevisiae YOR103c OST2 oligosaccharyltransferase epsilon subunit, similar to Saccharomyces cerevisiae OST2 (YOR103C); ancestral locus Anc_2.181
YALI1_E10587g	Compare to YALI0E08756g, similar to Saccharomyces cerevisiae RAS2 (YNL098C) and RAS1 (YOR101W); ancestral locus Anc_2.182, similar to uniprot|P01119 Saccharomyces cerevisiae YOR101w RAS1 GTP-binding protein
YALI1_E10712g	Compare to YALI0E08822g, similar to ca|CA0227|CaPHO23 Candida albicans CaPHO23 Involved in transcriptional regulation of PHO5 (by homology)
YALI1_E10755g	Compare to YALI0E08844g, weakly similar to uniprot|Q01477 Saccharomyces cerevisiae YER151c UBP3 ubiquitin-specific proteinase singleton Ubiquitin carboxyl-terminal hydrolase 3 (Deubiquitinating enzyme 3)
YALI1_E10811g	Compare to YALI0E08866g, similar to uniprot|Q7S698 Neurospora crassa NCU04755.1 hypothetical protein, similar to Saccharomyces cerevisiae SCY1 (YGL083W); ancestral locus Anc_6.191
YALI1_E10836g	Truncated form of YALI0E08888g, some similarities with uniprot|Q06810 Saccharomyces cerevisiae YPR075c OPY2 pheromone resistant yeast 2
YALI1_E10852g	Compare to YALI0E08910g, weakly similar to uniprot|Q873E9 Neurospora crassa NCU03338.1 predicted protein no
YALI1_E10899g	Compare to YALI0E08932g, no similarity
YALI1_E10934g	Compare to YALI0E08954g, no similarity
YALI1_E10951g	Compare to YALI0E08969g, weakly similar to ca|CA5148|CaTFG1 Candida albicans CaTFG1 RNA pol.II transcription initiation factor TFIIF (by homology), similar to uniprot|P39109 Saccharomyces cerevisiae YDR135c YCF1 glutathione S-conjugate transporter vacuolar
YALI1_E11048g	Compare to YALI0E09012g, similar to uniprot|P53115 Saccharomyces cerevisiae YGL150c INO80
YALI1_E11083g	Compare to YALI0E09015g, weakly similar to uniprot|P37020 Saccharomyces cerevisiae YJR040w GEF1 voltage-gated chloride channel protein
YALI1_E11136g	Compare to YALI0E09020g, no similarity
YALI1_E11154g	Compare to YALI0E09042g, weakly similar to DEHA0C18436g Debaryomyces hansenii, similar to Saccharomyces cerevisiae NPP1 (YCR026C) and NPP2 (YEL016C); ancestral locus Anc_1.444
YALI1_E11181g	Compare to YALI0E09064g, similar to DEHA0F07326g Debaryomyces hansenii IPF 8538.1
YALI1_E11215g	Compare to YALI0E09086g, similar to Saccharomyces cerevisiae BUD2 (YKL092C); ancestral locus Anc_2.490, similar to uniprot|P33277 Schizosaccharomyces pombe GAP1 GTPase-activating protein (Ras GTPase-activating protein)
YALI1_E11255g	Compare to YALI0E09108g, similar to Saccharomyces cerevisiae CYS4 (YGR155W); ancestral locus Anc_4.69, similar to uniprot|P32582 Saccharomyces cerevisiae YGR155w CYS4 cystathionine beta-synthase
YALI1_E11289g	Compare to YALI0E09130g, no similarity, similar to Saccharomyces cerevisiae YGL041W-A; ancestral locus Anc_4.68
YALI1_E11309g	Compare to YALI0E09152g, some similarities with uniprot|P27476 Saccharomyces cerevisiae YGR159c NSR1 nuclear localization sequence binding protein
YALI1_E11323g	Compare to YALI0E09174g, similar to Saccharomyces cerevisiae RNA15 (YGL044C); ancestral locus Anc_4.66, similar to uniprot|P25299 Saccharomyces cerevisiae YGL044c RNA15 component of pre-mRNA 3 -end processing factor CF I
YALI1_E11341g	Compare to YALI0E09196g, similar to Saccharomyces cerevisiae DST1 (YGL043W); ancestral locus Anc_4.67, similar to uniprot|P07273 Saccharomyces cerevisiae YGL043w DST1 TFIIS (transcription elongation factor)
YALI1_E11351g	Compare to YALI0E09218g, no similarity
YALI1_E11370g	Compare to YALI0E09240g, similar to Saccharomyces cerevisiae PET112 (YBL080C); ancestral locus Anc_7.403, weakly similar to uniprot|P33893 Saccharomyces cerevisiae YBL080c PET112 required to maintain rho+ mitochondrial DNA
YALI1_E11402g	Compare to YALI0E09262g, similar to uniprot|O94021 Candida albicans CA49C10. 07C hypothetical 48.1 kDa protein
YALI1_E11415g	Compare to YALI0E09276g, weakly similar to uniprot|P18898 Saccharomyces cerevisiae YGL155w CDC43 geranylgeranyltransferase beta subunit, similar to Saccharomyces cerevisiae CDC43 (YGL155W); ancestral locus Anc_2.312
YALI1_E11441g	Compare to YALI0E09284g, similar to Saccharomyces cerevisiae YDL119C; ancestral locus Anc_2.313, similar to KLLA0E08877g Kluyveromyces lactis
YALI1_E11510g	Compare to YALI0E09306g, no similarity, similar to Saccharomyces cerevisiae LYS5 (YGL154C); ancestral locus Anc_2.314, weakly similar to uniprot|P50113 Saccharomyces cerevisiae YGL154c LYS5 L-aminoadipate-semialdehyde dehydrogenase small subunit
YALI1_E11587g	Compare to YALI0E09405g, similar to Saccharomyces cerevisiae PEX14 (YGL153W); ancestral locus Anc_2.315, weakly similar to uniprot|P53112 Saccharomyces cerevisiae YGL153w PEX14 peroxisomal protein involved in protein import - peroxin
YALI1_E11619g	Compare to YALI0E09427g, similar to Saccharomyces cerevisiae TRX3 (YCR083W); ancestral locus Anc_6.359, similar to uniprot|P22217 Saccharomyces cerevisiae YLR043c TRX1 thioredoxin I
YALI1_E11630g	Compare to YALI0E09449g, similar to uniprot|P32579 Saccharomyces cerevisiae YGL169w SUA5 translation initiation protein, similar to Saccharomyces cerevisiae SUA5 (YGL169W); ancestral locus Anc_8.111
YALI1_E11674g	Compare to YALI0E09471g, uniprot|O43108 Yarrowia lipolytica Calcium- transporting ATPase 1, similar to Saccharomyces cerevisiae PMR1 (YGL167C); ancestral locus Anc_8.112
YALI1_E11768g	Compare to YALI0E09493g, similar to uniprot|P07259 Saccharomyces cerevisiae YJL130c URA2 multifunctional pyrimidine biosynthesis protein
YALI1_E11798g	Compare to YALI0E09515g, no similarity
YALI1_E11835g	Compare to YALI0E09559g, weakly similar to ca|CA0204|CaIKI3 Candida albicans killer toxin insensitive protein 3
YALI1_E11875g	Compare to YALI0E09581g, weakly similar to DEHA0F11682g Debaryomyces hansenii
YALI1_E11943g	Compare to YALI0E09603g, similar to Saccharomyces cerevisiae GDH2 (YDL215C); ancestral locus Anc_2.68, no similarity, similar to uniprot|P33327 Saccharomyces cerevisiae YDL215c GDH2 NAD-specific glutamate dehydrogenase (NAD)
YALI1_E11969g	Compare to YALI0E09647g, no similarity
YALI1_E12019g	Compare to YALI0E09669g, no similarity
YALI1_E12067g	Compare to YALI0E09691g, similar to uniprot|Q02608 Saccharomyces cerevisiae YPL013c, similar to Saccharomyces cerevisiae MRPS16 (YPL013C); ancestral locus Anc_8.79
YALI1_E12103g	Compare to YALI0E09757g, some similarities with KLLA0F27225g Kluyveromyces lactis, similar to Saccharomyces cerevisiae YPL014W; ancestral locus Anc_8.80
YALI1_E12159g	Compare to YALI0E09779g, no similarity
YALI1_E12206g	Compare to YALI0E09801g, similar to DEHA0C16368g Debaryomyces hansenii
YALI1_E12223g	Compare to YALI0E09823g, similar to Saccharomyces cerevisiae THG1 (YGR024C); ancestral locus Anc_4.161, similar to DEHA0F24321g Debaryomyces hansenii
YALI1_E12244g	Compare to YALI0E09845g, similar to uniprot|P22138 Saccharomyces cerevisiae YPR010c RPA135 DNA-directed RNA polymerase I 135 KD subunit, similar to Saccharomyces cerevisiae RPA135 (YPR010C); ancestral locus Anc_8.113
YALI1_E12295g	Compare to YALI0E09867g, similar to uniprot|Q12150 Saccharomyces cerevisiae YLR087c, similar to Saccharomyces cerevisiae CSF1 (YLR087C); ancestral locus Anc_8.260
YALI1_E12402g	Compare to YALI0E09889g, similar to Saccharomyces cerevisiae MUD2 (YKL074C); ancestral locus Anc_2.619, weakly similar to uniprot|Q9ZR39 Nicotiana plumbaginifolia U2 snRNP auxiliary factor large subunit
YALI1_E12454g	Compare to YALI0E09911g, similar to Saccharomyces cerevisiae BUB2 (YMR055C); ancestral locus Anc_2.620, weakly similar to uniprot|P26448 Saccharomyces cerevisiae YMR055c BUB2 cell cycle arrest protein
YALI1_E12482g	Compare to YALI0E09933g, similar to Saccharomyces cerevisiae STV1 (YMR054W); ancestral locus Anc_2.617, similar to uniprot|P32563 Saccharomyces cerevisiae YOR270c VPH1 H+-ATPase V0 domain 95K subunit vacuolar
YALI1_E12496g	Compare to YALI0E09955g, similar to Saccharomyces cerevisiae STB6 (YKL072W) and STB2 (YMR053C); ancestral locus Anc_2.616, some similarities with uniprot|P36085 Saccharomyces cerevisiae YKL072w STB6 SIN3 binding protein
YALI1_E12541g	Compare to YALI0E09977g, some similarities with uniprot|P35208 Saccharomyces cerevisiae YJL127c SPT10 transcription regulatory protein
YALI1_E12561g	Compare to YALI0E09999g, similar to uniprot|P35208 Saccharomyces cerevisiae YJL127c SPT10 transcription regulatory protein
YALI1_E12587g	Compare to YALI0E10021g, some similarities with uniprot|P53306 Saccharomyces cerevisiae YGR216C N-acetylglucosaminyl- phosphatidylinositol biosynthetic protein GPI1, similar to Saccharomyces cerevisiae GPI1 (YGR216C); ancestral locus Anc_5.114
YALI1_E12614g	Compare to YALI0E10043g, weakly similar to uniprot|Q9P5S9 Neurospora crassa Nebula related protein
YALI1_E12643g	Compare to YALI0E10065g, similar to uniprot|P19516 Saccharomyces cerevisiae YPL132w COX11 cytochrome-c oxidase assembly protein, similar to Saccharomyces cerevisiae COX11 (YPL132W); ancestral locus Anc_8.641
YALI1_E12668g	Compare to YALI0E10087g, similar to CAGL0M02651g Candida glabrata, similar to Saccharomyces cerevisiae RDS2 (YPL133C); ancestral locus Anc_8.642
YALI1_E12703g	Compare to YALI0E10109g, weakly similar to DEHA0E22308g Debaryomyces hansenii, similar to Saccharomyces cerevisiae CIC1 (YHR052W); ancestral locus Anc_5.278
YALI1_E12711g	Compare to YALI0E10131g, similar to Saccharomyces cerevisiae ELF1 (YKL160W); ancestral locus Anc_5.279, similar to uniprot|P36053 Saccharomyces cerevisiae YKL160w
YALI1_E12730g	Compare to YALI0E10144g, similar to uniprot|P00427 Saccharomyces cerevisiae YHR051w COX6 cytochrome-c oxidase subunit VI, similar to Saccharomyces cerevisiae COX6 (YHR051W); ancestral locus Anc_5.280
YALI1_E12747g	Compare to YALI0E10153g, no similarity
YALI1_E12793g	Compare to YALI0E10175g, weakly similar to uniprot|Q12303 Saccharomyces cerevisiae YLR121c YPS3 GPI-anchored aspartyl protease 3 (yapsin 3)
YALI1_E12847g	Compare to YALI0E10197g, similar to DEHA0F25982g Debaryomyces hansenii IPF 6093.1
YALI1_E12893g	Compare to YALI0E10219g, similar to uniprot|P19145 Saccharomyces cerevisiae YKR039w GAP1 general amino acid permease
YALI1_E12919g	Compare to YALI0E10241g, weakly similar to uniprot|Q6CI91 Yarrowia lipolytica YALI0A00550g
YALI1_E12952g	Compare to YALI0E10263g, similar to Saccharomyces cerevisiae SCJ1 (YMR214W); ancestral locus Anc_8.730, uniprot|Q6H9R7 Yarrowia lipolytica similar to uniprot|P25303 Saccharomyces cerevisiae YMR214W SCJ1 DnaJ- related protein
YALI1_E12962g	Compare to YALI0E10285g, similar to Saccharomyces cerevisiae DML1 (YMR211W); ancestral locus Anc_8.724, similar to CAGL0F03795g Candida glabrata
YALI1_E12987g	Compare to YALI0E10307g, similar to uniprot|P17324 Saccharomyces cerevisiae YIL168W SDL1 L-serine dehydratase and uniprot|P25379 Saccharomyces cerevisiae YCL064c CHA1 L-serine/L-threonine deaminase
YALI1_E13011g	Compare to YALI0E10329g, similar to Saccharomyces cerevisiae RAX1 (YOR301W); ancestral locus Anc_8.774, weakly similar to uniprot|Q08760 Saccharomyces cerevisiae YOR301w RAX1 similarity to S. pombe SPAC23G3. 05c
YALI1_E13034g	Compare to YALI0E10351g, similar to Saccharomyces cerevisiae ROX3 (YBL093C); ancestral locus Anc_7.425, weakly similar to uniprot|Q9Y7N2 Schizosaccharomyces pombe RNA polymerase II mediator complex protein rox3
YALI1_E13082g	Compare to YALI0E10373g, weakly similar to uniprot|Q09873 Schizosaccharomyces pombe Hypothetical protein C12G12.10 in chromosome
YALI1_E13132g	Compare to YALI0E10395g, similar to uniprot|Q8X035 Neurospora crassa
YALI1_E13150t	Full length Line element
YALI1_E13173t	Full length Line element
YALI1_E13223g	Compare to YALI0E10417g, similar to uniprot|Q8TF96 Aspergillus oryzae CHSZ chitin synthase
YALI1_E13280g	Compare to YALI0E10439g, weakly similar to uniprot|P40079 Saccharomyces cerevisiae YER127w LCP5 NGG1P interacting protein, similar to Saccharomyces cerevisiae LCP5 (YER127W); ancestral locus Anc_8.138
YALI1_E13287g	Compare to YALI0E10461g, similar to Saccharomyces cerevisiae NSA2 (YER126C); ancestral locus Anc_8.137, highly similar to DEHA0C15422g Debaryomyces hansenii
YALI1_E13329g	Compare to YALI0E10483g, weakly similar to uniprot|P53943 Saccharomyces cerevisiae YNL065w similarity to resistance proteins
YALI1_E13360g	Truncated form of YALI0E10505g, no similarity
YALI1_E13402g	Compare to YALI0E10527g, no similarity possibly noncoding
YALI1_E13428g	Compare to YALI0E10549g, similar to Saccharomyces cerevisiae YGR266W; ancestral locus Anc_5.39, similar to CAGL0F08481g Candida glabrata
YALI1_E13472g	Compare to YALI0E10571g, similar to uniprot|P32875 Saccharomyces cerevisiae YOR196c LIP5 lipoic acid synthase mitochondrial precursor, similar to Saccharomyces cerevisiae LIP5 (YOR196C); ancestral locus Anc_8.606
YALI1_E13495g	Compare to YALI0E10593g, weakly similar to CAGL0D00924g Candida glabrata
YALI1_E13509g	Compare to YALI0E10615g, no similarity possibly noncoding
YALI1_E13514g	Compare to YALI0E10637g, similar to uniprot|Q9C257 Neurospora crassa and uniprot|P36062 Saccharomyces cerevisiae YKL146w
YALI1_E13541g	Compare to YALI0E10659g, uniprot|Q99156 Yarrowia lipolytica Lipase 1 precursor (EC 3.1.1.3)
YALI1_E13579g	Compare to YALI0E10681g, similar to Saccharomyces cerevisiae WAR1 (YML076C); ancestral locus Anc_4.344, weakly similar to uniprot|Q03631 Saccharomyces cerevisiae YML076c putative transcription factor
YALI1_E13611g	Compare to YALI0E10725g, weakly similar to uniprot|Q9UST8 Schizosaccharomyces pombe Ribonuclease H (RNase H)
YALI1_E13637g	Compare to YALI0E10747g, similar to uniprot|P40348 Saccharomyces cerevisiae YJR068w RFC2 DNA replication factor C 41 KD subunit
YALI1_E13677g	Compare to YALI0E10769g, similar to uniprot|P14242 Saccharomyces cerevisiae YNL082w PMS1 DNA mismatch repair protein
YALI1_E13683g	Compare to YALI0E10791g, no similarity
YALI1_E13708g	Compare to YALI0E10813g, weakly similar to uniprot|P48233 Saccharomyces cerevisiae YNL083w weak similarity to rabbit peroxisomal Ca-dependent solute carrier
YALI1_E13718g	Compare to YALI0E10835g, no similarity possibly noncoding
YALI1_E13727g	Compare to YALI0E10857g, some similarities with uniprot|P40518 Saccharomyces cerevisiae YIL062c ARC15 subunit of the ARP2/3 complex, similar to Saccharomyces cerevisiae ARC15 (YIL062C); ancestral locus Anc_7.252
YALI1_E13755g	Compare to YALI0E10879g, weakly similar to uniprot|AAO59297 Cochliobolus heterostrophus KLP10 kinesin
YALI1_E13765g	Compare to YALI0E10901g, similar to Saccharomyces cerevisiae YRB2 (YIL063C); ancestral locus Anc_7.253, weakly similar to uniprot|P40517 Saccharomyces cerevisiae YIL063C YRB2 Ran-specific GTPase-activating protein 2 involved in nuclear protein export
YALI1_E13787g	Compare to YALI0E10923g, similar to Saccharomyces cerevisiae YIL064W; ancestral locus Anc_7.254, similar to KLLA0C07931g Kluyveromyces lactis and uniprot|Q9GYH9 Caenorhabditis elegans F29B9.1
YALI1_E13808g	Compare to YALI0E10989g, similar to Saccharomyces cerevisiae SNP1 (YIL061C); ancestral locus Anc_7.250, weakly similar to uniprot|Q00916 Saccharomyces cerevisiae YIL061c SNP1 U1 small nuclear ribonucleoprotein
YALI1_E13818g	Compare to YALI0E11011g, weakly similar to DEHA0F01914g Debaryomyces hansenii
YALI1_E13823g	Compare to YALI0E11033g, some similarities with uniprot|Q06090 Saccharomyces cerevisiae YPR100w, similar to Saccharomyces cerevisiae MRPL51 (YPR100W); ancestral locus Anc_3.412
YALI1_E13848g	Compare to YALI0E11077g, similar to uniprot|Q07538 Schizosaccharomyces pombe SPCC777.14 PRP4 Serine/threonine-protein kinase, similar to Saccharomyces cerevisiae ISR1 (YPR106W); ancestral locus Anc_3.421
YALI1_E13899g	Compare to YALI0E11099g, uniprot|Q9C1T3 Yarrowia lipolytica Acetoacetyl-CoA thiolase (EC 2.3.1.9)
YALI1_E13926g	Compare to YALI0E11121g, weakly similar to uniprot|Q10260 Schizosaccharomyces pombe Hypothetical protein C56F8.12 in chromosome I
YALI1_E13963g	Compare to YALI0E11143g, some similarities with DEHA0F01892g Debaryomyces hansenii
YALI1_E14003g	Compare to YALI0E11165g, weakly similar to KLLA0F02596g Kluyveromyces lactis no start, similar to Saccharomyces cerevisiae SCD5 (YOR329C); ancestral locus Anc_7.66
YALI1_E14013g	Compare to YALI0E11187g, no similarity
YALI1_E14028g	Compare to YALI0E11209g, weakly similar to uniprot|Q6BZV2 Yarrowia lipolytica YALI0F30657g
YALI1_E14068g	Compare to YALI0E11319g, no similarity
YALI1_E14080g	Compare to YALI0E11330g, some similarities with uniprot|A2E345 Trichomonas vaginalis Myb-like DNA-binding domain containing protein
YALI1_E14118g	Compare to YALI0E11341g, similar to uniprot|P38694 Saccharomyces cerevisiae YHR039c, similar to Saccharomyces cerevisiae MSC7 (YHR039C); ancestral locus Anc_5.305
YALI1_E14125g	Compare to YALI0E11355g, similar to uniprot|P48836 Saccharomyces cerevisiae YHR039ca VMA10 H+-transporting ATPase V0 domain 13 KD subunit vacuolar, similar to Saccharomyces cerevisiae VMA10 (YHR039C-A); ancestral locus Anc_5.304
YALI1_E14132g	Compare to YALI0E11363g, weakly similar to uniprot|P38772 Saccharomyces cerevisiae YHR040w, similar to Saccharomyces cerevisiae BCD1 (YHR040W); ancestral locus Anc_5.303
YALI1_E14153g	Compare to YALI0E11385g, weakly similar to uniprot|P38772 Saccharomyces cerevisiae YHR040w, similar to Saccharomyces cerevisiae MET8 (YBR213W); ancestral locus Anc_6.105
YALI1_E14164g	Compare to YALI0E11407g, weakly similar to uniprot|Q8J2U0 Aspergillus oryzae MOXY monooxygenase
YALI1_E14201g	Compare to YALI0E11429g, weakly similar to uniprot|Q9P4F1 Aspergillus parasiticus MOXY monooxigenase
YALI1_E14234g	Compare to YALI0E11451g, no similarity
YALI1_E14274g	Compare to YALI0E11473g, similar to uniprot|P50505 Debaryomyces occidentalis HAK1 high affinity potassium transporter
YALI1_E14316g	Compare to YALI0E11495g, similar to Saccharomyces cerevisiae AMD1 (YML035C); ancestral locus Anc_5.578, similar to uniprot|P15274 Saccharomyces cerevisiae YML035c AMD1 AMP deaminase
YALI1_E14350g	Compare to YALI0E11517g, weakly similar to uniprot|Q8TFK5 Yarrowia lipolytica CWP1 Cell wall protein
YALI1_E14385g	Compare to YALI0E11539g, weakly similar to uniprot|Q03707 Saccharomyces cerevisiae YML034W SRC1 protein, similar to Saccharomyces cerevisiae YDR458C and SRC1 (YML034W); ancestral locus Anc_5.577
YALI1_E14427g	Compare to YALI0E11561g, similar to Saccharomyces cerevisiae YJR107W; ancestral locus Anc_7.497, similar to uniprot|CAD70713 Yarrowia lipolytica lipase LIP4
YALI1_E14451g	Compare to YALI0E11583g, no similarity
YALI1_E14469g	Compare to YALI0E11605g, no similarity
YALI1_E14489g	Compare to YALI0E11627g, similar to Saccharomyces cerevisiae GPA2 (YER020W); ancestral locus Anc_7.496, similar to uniprot|P28868 Candida albicans GPA1 Guanine nucleotide-binding protein alpha subunit
YALI1_E14497g	Compare to YALI0E11649g, similar to KLLA0A06710g Kluyveromyces lactis
YALI1_E14505g	Compare to YALI0E11671g, similar to uniprot|P38858 Saccharomyces cerevisiae YHR163w SOL3 possible 6-phosphogluconolactonase
YALI1_E14535g	Compare to YALI0E11693g, some similarities with uniprot|Q7S2G7 Neurospora crassa NCU08891.1 predicted protein (40940 - 37571)
YALI1_E14555g	Compare to YALI0E11715g, weakly similar to uniprot|P12630 Saccharomyces cerevisiae YIL015w BAR1 Barrierpepsin precursor
YALI1_E14561g	Compare to YALI0E11737g, no similarity
YALI1_E14584g	Compare to YALI0E11803g, weakly similar to uniprot|P38116 Saccharomyces cerevisiae YBR164c ARL1 ADP-ribosylation factor
YALI1_E14604g	Compare to YALI0E11825g, similar to Saccharomyces cerevisiae VAM3 (YOR106W); ancestral locus Anc_2.175, similar to uniprot|P32854 Saccharomyces cerevisiae YOR036w PEP12 syntaxin
YALI1_E14619g	Compare to YALI0E11847g, similar to DEHA0E05885g Debaryomyces hansenii putative amidase
YALI1_E14644g	Compare to YALI0E11869g, similar to Saccharomyces cerevisiae POL1 (YNL102W); ancestral locus Anc_2.176, similar to uniprot|P13382 Saccharomyces cerevisiae YNL102w CDC17 DNA-directed DNA polymerase alpha 180 KD subunit
YALI1_E14698g	Truncated form of YALI0E11891g, weakly similar to uniprot|P25710 Neurospora crassa NADH- ubiquinone oxidoreductase 21.3 kDa subunit
YALI1_E14709g	Compare to YALI0E11913g, similar to Saccharomyces cerevisiae ISN1 (YOR155C); ancestral locus Anc_5.501, similar to DEHA0G08063g Debaryomyces hansenii
YALI1_E14733g	Compare to YALI0E11935g, no similarity
YALI1_E14749g	Compare to YALI0E11957g, no similarity
YALI1_E14762g	Compare to YALI0E11979g, weakly similar to uniprot|BAC71576 Streptomyces avermitilis SAV3864 Putative 4-coumarate:CoA ligase
YALI1_E14805g	Compare to YALI0E12001g, weakly similar to uniprot|Q07807 Saccharomyces cerevisiae YLL013c transcript-specific regulator of mRNA degradation
YALI1_E14824g	Compare to YALI0E12023g, similar to Saccharomyces cerevisiae ECO1 (YFR027W); ancestral locus Anc_1.350, weakly similar to uniprot|P43605 Saccharomyces cerevisiae YFR027w ECO1 involved in sister chromatid cohesion during replication
YALI1_E14856g	Compare to YALI0E12045g, some similarities with uniprot|Q6CC51 Yarrowia lipolytica YALI0C12452g
YALI1_E14889g	Compare to YALI0E12067g, similar to Saccharomyces cerevisiae MAK32 (YCR019W); ancestral locus Anc_1.440, similar to uniprot|P23060 Saccharomyces cerevisiae YCR019w MAK32 necessary for structural stability of L-A dsRNA-containing particles
YALI1_E14910g	Truncated form of YALI0E12081g, similar to Saccharomyces cerevisiae UBC8 (YEL012W); ancestral locus Anc_1.436, similar to uniprot|P28263 Saccharomyces cerevisiae YEL012w UBC8 E2 ubiquitin-conjugating enzyme
YALI1_E14925g	Compare to YALI0E12089g, similar to uniprot|Q07830 Saccharomyces cerevisiae YLL031c GPI13 protein involved in glycosylphosphatidylinositol biosynthesis, similar to Saccharomyces cerevisiae GPI13 (YLL031C); ancestral locus Anc_4.28
YALI1_E14967g	Compare to YALI0E12111g, no similarity
YALI1_E14988g	Compare to YALI0E12133g, similar to uniprot|P00445 Saccharomyces cerevisiae YJR104c SOD1 copper-zinc superoxide dismutase, similar to Saccharomyces cerevisiae SOD1 (YJR104C); ancestral locus Anc_7.477
YALI1_E15015g	Truncated form of YALI0E12155g, weakly similar to uniprot|Q9Y7U5 Schizosaccharomyces pombe SPCC645.06C TUS1 similarity to GDP-GTP exchange factors, similar to Saccharomyces cerevisiae TUS1 (YLR425W); ancestral locus Anc_4.305
YALI1_E15074g	Compare to YALI0E12177g, weakly similar to uniprot|P46944 Saccharomyces cerevisiae YDR108w GSG1 sporulation specific protein, similar to Saccharomyces cerevisiae GSG1 (YDR108W); ancestral locus Anc_8.255
YALI1_E15086g	Truncated form of YALI0E12199g, some similarities with uniprot|P50108 Saccharomyces cerevisiae YDR245w MNN10 subunit of mannosyltransferase complex
YALI1_E15093g	Truncated form of YALI0E12199g, some similarities with uniprot|P50108 Saccharomyces cerevisiae YDR245w MNN10 subunit of mannosyltransferase complex, similar to Saccharomyces cerevisiae MNN10 (YDR245W); ancestral locus Anc_8.471
YALI1_E15115g	Compare to YALI0E12221g, similar to Saccharomyces cerevisiae YER113C; ancestral locus Anc_7.411, similar to uniprot|P32802 Saccharomyces cerevisiae YLR083c EMP70 endosomal protein
YALI1_E15144g	Compare to YALI0E12243g, similar to Saccharomyces cerevisiae KAP123 (YER110C); ancestral locus Anc_7.408, similar to uniprot|P40069 Saccharomyces cerevisiae YER110c KAP123 RAN-binding protein
YALI1_E15197g	Compare to YALI0E12276g, gnl|GLV|YALI0E12276g [Yarrowia lipolytica] similar to uniprot|Q06537 Saccharomyces cerevisiae Ypr153wp (YPR153W), similar to Saccharomyces cerevisiae YPR153W; ancestral locus Anc_3.500
YALI1_E15211g	Compare to YALI0E12287g, some similarities with wi|NCU01858.1 Neurospora crassa NCU01858.1 hypothetical protein, similar to Saccharomyces cerevisiae CSM3 (YMR048W); ancestral locus Anc_2.612
YALI1_E15229g	Compare to YALI0E12309g, no similarity
YALI1_E15256g	Compare to YALI0E12331g, similar to uniprot|Q6C808 Yarrowia lipolytica YALI0D23771g
YALI1_E15274g	Compare to YALI0E12353g, similar to Saccharomyces cerevisiae MRP20 (YDR405W); ancestral locus Anc_5.498, weakly similar to uniprot|P32387 Saccharomyces cerevisiae YDR405w MRP20 60S ribosomal protein L41 mitochondrial [Precursor]
YALI1_E15318g	Compare to YALI0E12375g, weakly similar to uniprot|Q09778 Schizosaccharomyces pombe SPAC22F3.13
YALI1_E15321g	Compare to YALI0E12397g, similar to Saccharomyces cerevisiae YJR142W; ancestral locus Anc_4.378, similar to uniprot|P47173 Saccharomyces cerevisiae YJR142w
YALI1_E15398g	Compare to YALI0E12419g, some similarities with uniprot|P38137 Saccharomyces cerevisiae YBR222c PCS60 AMP-binding protein peroxisomal
YALI1_E15432g	Compare to YALI0E12441g, similar to Saccharomyces cerevisiae OPI3 (YJR073C); ancestral locus Anc_1.526, similar to uniprot|P05375 Saccharomyces cerevisiae YJR073c OPI3 methylene-fatty-acyl-phospholipid synthase
YALI1_E15452g	Compare to YALI0E12463g, similar to uniprot|O74230 Candida sp.HA167 XDH Xylitol dehydrogenase
YALI1_E15469g	Compare to YALI0E12485g, similar to Saccharomyces cerevisiae YNR029C; ancestral locus Anc_6.337, similar to uniprot|P53729 Saccharomyces cerevisiae YNR029c
YALI1_E15492g	Compare to YALI0E12507g, similar to uniprot|Q873I9 Neurospora crassa B9B11. 100 related to pirin
YALI1_E15502g	Compare to YALI0E12529g, no similarity
YALI1_E15521g	Compare to YALI0E12551g, weakly similar to uniprot|P32791 Saccharomyces cerevisiae YLR214w FRE1 ferric (and cupric) reductase transmembrane component 1 [Precursor]
YALI1_E15555g	Compare to YALI0E12573g, similar to uniprot|Q8AW60 Brachydanio rerio SI:dZ181P14.1
YALI1_E15559g	Compare to YALI0E12595g, similar to uniprot|Q9V9A7 Drosophila melanogaster Putative propionyl-CoA carboxylase beta chain mitochondrial precursor (EC 6.4.1.3) (PCCase beta subunit) (Propanoyl-CoA:carbon dioxide ligase beta subunit)
YALI1_E15583g	Compare to YALI0E12617g, similar to Saccharomyces cerevisiae SAF1 (YBR280C); ancestral locus Anc_1.307, weakly similar to KLLA0F01969g Kluyveromyces lactis IPF 1820.1
YALI1_E15606g	Compare to YALI0E12628g, similar to uniprot|P10174 Saccharomyces cerevisiae YMR256C COX7 Cytochrome c oxidase polypeptide VII, similar to Saccharomyces cerevisiae COX7 (YMR256C); ancestral locus Anc_8.807
YALI1_E15625g	Compare to YALI0E12639g, similar to Saccharomyces cerevisiae PSH1 (YOL054W); ancestral locus Anc_8.808, weakly similar to uniprot|Q9P3U8 Schizosaccharomyces pombe Zf-C3H4C zinc finger protein
YALI1_E15629g	Compare to YALI0E12661g, some similarities with uniprot|Q8PKQ8 Xanthomonas axonopodis Ribonuclease E
YALI1_E15659g	Compare to YALI0E12683g, highly similar to uniprot|P05694 Saccharomyces cerevisiae YER091c MET6 5- methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, similar to Saccharomyces cerevisiae MET6 (YER091C); ancestral locus Anc_7.378
YALI1_E15718g	Compare to YALI0E12705g, uniprot|Q96X23 Yarrowia lipolytica Ras guanine- nucleotide exchange protein Cdc25p, similar to Saccharomyces cerevisiae BUD5 (YCR038C); ancestral locus Anc_1.134
YALI1_E15758g	Compare to YALI0E12727g, no similarity possibly noncoding
YALI1_E15774g	similar to Saccharomyces cerevisiae RMD11 (YHL023C); ancestral locus Anc_4.34
YALI1_E15804g	Compare to YALI0E12837g, similar to uniprot|Q96VC8 Yarrowia lipolytica GPR1 Glyoxylate pathway regulator and uniprot|P25613 Saccharomyces cerevisiae YCR010c SPG2
YALI1_E15835g	Compare to YALI0E12859g, similar to Saccharomyces cerevisiae PCS60 (YBR222C); ancestral locus Anc_6.120, similar to uniprot|P38137 Saccharomyces cerevisiae YBR222c PCS60 AMP-binding protein peroxisomal-coenzyme A synthetase
YALI1_E15843g	Compare to YALI0E12881g, some similarities with uniprot|O93991 Candida albicans CA20C1.03C Hypothetical 24.2 kDa protein
YALI1_E15865g	Compare to YALI0E12947g, similar to Saccharomyces cerevisiae YHL008C; ancestral locus Anc_2.540, some similarities with uniprot|P38750 Saccharomyces cerevisiae YHL008c
YALI1_E15889g	Compare to YALI0E12969g, similar to uniprot|O94076 Emericella nidulans BIMD protein, similar to Saccharomyces cerevisiae PDS5 (YMR076C); ancestral locus Anc_2.539
YALI1_E15939g	Compare to YALI0E12991g, similar to Saccharomyces cerevisiae RCO1 (YMR075W); ancestral locus Anc_2.538, some similarities with uniprot|Q04779 Saccharomyces cerevisiae YMR075W Transcriptional regulatory protein RCO1
YALI1_E15991g	Compare to YALI0E13035g, similar to uniprot|Q09184 Schizosaccharomyces pombe SPAC23H4.09 curved DNA-binding protein (42 kDa protein)
YALI1_E16002g	Compare to YALI0E13057g, similar to uniprot|Q04728 Saccharomyces cerevisiae YMR062c ECM40 acetylornithine acetyltransferase, similar to Saccharomyces cerevisiae ECM40 (YMR062C); ancestral locus Anc_2.628
YALI1_E16023g	Compare to YALI0E13079g, similar to Saccharomyces cerevisiae EAF6 (YJR082C); ancestral locus Anc_7.447, similar to ca|CA3873|IPF8825 Candida albicans
YALI1_E16026g	Compare to YALI0E13101g, uniprot|Q96X27 Yarrowia lipolytica Transcription factor Snf5p component of SWI/SNF transcription activator complex
YALI1_E16068g	Compare to YALI0E13123g, similar to uniprot|P07263 Saccharomyces cerevisiae YPR033c HTS1 histidine--tRNA ligase mitochondrial, similar to Saccharomyces cerevisiae HTS1 (YPR033C); ancestral locus Anc_7.445
YALI1_E16076g	Compare to YALI0E13145g, similar to uniprot|P38293 Saccharomyces cerevisiae YBR173c UMP1 proteasome maturation factor, similar to Saccharomyces cerevisiae UMP1 (YBR173C); ancestral locus Anc_8.586
YALI1_E16097g	Compare to YALI0E13167g, weakly similar to uniprot|P43589 Saccharomyces cerevisiae YFR005c SAD1 SnRNP assembly defective, similar to Saccharomyces cerevisiae SAD1 (YFR005C); ancestral locus Anc_8.97
YALI1_E16121g	Compare to YALI0E13189g, weakly similar to uniprot|Q02875 Saccharomyces cerevisiae YPL105c, similar to Saccharomyces cerevisiae SMY2 (YBR172C) and YPL105C; ancestral locus Anc_8.587
YALI1_E16164g	Compare to YALI0E13211g, similar to Saccharomyces cerevisiae SEC66 (YBR171W); ancestral locus Anc_8.588, similar to uniprot|P33754 Saccharomyces cerevisiae YBR171w SEC66 ER protein-translocation complex subunit
YALI1_E16174g	Compare to YALI0E13233g, similar to Saccharomyces cerevisiae NPL4 (YBR170C); ancestral locus Anc_8.589, similar to uniprot|P33755 Saccharomyces cerevisiae YBR170c NPL4 nuclear protein localization factor and ER translocation component
YALI1_E16202g	Compare to YALI0E13255g, similar to Saccharomyces cerevisiae SSE2 (YBR169C) and SSE1 (YPL106C); ancestral locus Anc_8.590, similar to uniprot|P32589 Saccharomyces cerevisiae YPL106c SSE1 heat shock protein of HSP70 family
YALI1_E16255g	Compare to YALI0E13277g, uniprot|O93814 Yarrowia lipolytica Elongation factor 3 (EF-3)
YALI1_E16300g	Compare to YALI0E13299g, similar to uniprot|Q8HXH6 Macaca fascicularis
YALI1_E16305g	Compare to YALI0E13321g, similar to Saccharomyces cerevisiae YFR007W; ancestral locus Anc_8.101, similar to uniprot|Q871G7 Neurospora crassa NCU04309.1
YALI1_E16325g	Compare to YALI0E13343g, weakly similar to uniprot|Q9P6V9 Neurospora crassa NCU03670.1 hypothetical protein
YALI1_E16359g	Compare to YALI0E13420g, similar to Saccharomyces cerevisiae YPR004C; ancestral locus Anc_8.100, similar to uniprot|Q9HZP7 Pseudomonas aeruginosa Electron transfer flavoprotein alpha-subunit
YALI1_E16390g	Compare to YALI0E13442g, similar to Saccharomyces cerevisiae YPR003C; ancestral locus Anc_8.99, similar to uniprot|P53394 Saccharomyces cerevisiae YPR003c
YALI1_E16433g	Compare to YALI0E13464g, similar to Saccharomyces cerevisiae YFR006W; ancestral locus Anc_8.98, similar to DEHA0F26642g Debaryomyces hansenii IPF 6047.1 and uniprot|P43590 Saccharomyces cerevisiae YFR006w
YALI1_E16451g	Compare to YALI0E13486g, similar to Saccharomyces cerevisiae CBF5 (YLR175W); ancestral locus Anc_1.397, highly similar to uniprot|O13473 Kluyveromyces lactis Centromere/microtubule binding protein CBF5 and KLLA0D04796g Kluyveromyces lactis IPF 5085.1
YALI1_E16493g	Compare to YALI0E13508g, similar to Saccharomyces cerevisiae SIS1 (YNL007C); ancestral locus Anc_1.398, similar to uniprot|P25294 Saccharomyces cerevisiae YNL007c SIS1 heat shock protein
YALI1_E16501g	Compare to YALI0E13530g, highly similar to uniprot|P41318 Saccharomyces cerevisiae YNL006w LST8 required for transport of permeases from the golgi to the plasma membrane, similar to Saccharomyces cerevisiae LST8 (YNL006W); ancestral locus Anc_1.399
YALI1_E16531g	Compare to YALI0E13552g, some similarities with KLLA0A10241g Kluyveromyces lactis
YALI1_E16556g	Compare to YALI0E13574g, no similarity
YALI1_E16597g	Truncated form of YALI0E13596g, some similarities with uniprot|P48743 Saccharomyces cerevisiae YLR176c RFX1 repressor of DNA damage-inducible genes
YALI1_E16608g	Truncated form of YALI0E13596g, some similarities with uniprot|P48743 Saccharomyces cerevisiae YLR176c RFX1 repressor of DNA damage-inducible genes, similar to Saccharomyces cerevisiae RFX1 (YLR176C); ancestral locus Anc_1.400
YALI1_E16649g	Compare to YALI0E13618g, highly similar to uniprot|O60143 Schizosaccharomyces pombe 60S ribosomal protein L7-C, similar to Saccharomyces cerevisiae RLP7 (YNL002C); ancestral locus Anc_1.401
YALI1_E16675g	Compare to YALI0E13640g, similar to Saccharomyces cerevisiae CTK2 (YJL006C); ancestral locus Anc_5.242, weakly similar to uniprot|O59748 Schizosaccharomyces pombe Cyclin homolog and uniprot|P46962 Saccharomyces cerevisiae YJL006c CTK2 carboxy-terminal domain (CTD) kinase beta subunit
YALI1_E16694g	Truncated form of YALI0E13662g, similar to Saccharomyces cerevisiae BET4 (YJL031C); ancestral locus Anc_5.243, similar to uniprot|O94412 Schizosaccharomyces pombe Putative rab geranylgeranyltransferase alpha sub unit
YALI1_E16701g	Compare to YALI0E13684g, similar to Saccharomyces cerevisiae MAD2 (YJL030W); ancestral locus Anc_5.244, similar to uniprot|P40958 Saccharomyces cerevisiae YJL030w MAD2 spindle-assembly checkpoint protein
YALI1_E16731g	Compare to YALI0E13706g, uniprot|Q99170 Yarrowia lipolytica dnaK-type molecular chaperone involved in ER translocation of secretory proteins (BiP homologue), similar to Saccharomyces cerevisiae KAR2 (YJL034W); ancestral locus Anc_5.239
YALI1_E16750g	Compare to YALI0E13728g, similar to Saccharomyces cerevisiae TAD2 (YJL035C); ancestral locus Anc_5.238, similar to uniprot|P47058 Saccharomyces cerevisiae YJL035c TAD2 tRNA-specific adenosine deaminase 2
YALI1_E16773g	Compare to YALI0E13750g, similar to uniprot|CAD79666 Neurospora crassa B1D14. 230 Related to serine/threonine-protein kinase and DEHA0F25278g Debaryomyces hansenii
YALI1_E16820g	Compare to YALI0E13794g, weakly similar to uniprot|P32505 Saccharomyces cerevisiae YGL122c NAB2 nuclear poly(A)-binding protein, similar to Saccharomyces cerevisiae NAB2 (YGL122C); ancestral locus Anc_6.130
YALI1_E16854g	Compare to YALI0E13860g, weakly similar to uniprot|Q12303 Saccharomyces cerevisiae YLR121c YPS3 GPI-anchored aspartyl protease 3 (yapsin 3)
YALI1_E16900g	Compare to YALI0E13882g, similar to ca|CA1713 Candida albicans CAAL- IPF19743
YALI1_E16919g	Compare to YALI0E13904g, similar to uniprot|P47057 Saccharomyces cerevisiae YJL036w Sorting nexin 4, similar to Saccharomyces cerevisiae SNX4 (YJL036W); ancestral locus Anc_5.237
YALI1_E16950g	Compare to YALI0E13926g, similar to uniprot|Q04739 Saccharomyces cerevisiae YER027c GAL83 glucose repression protein
YALI1_E16974g	Truncated form of YALI0E13948g, some similarities with uniprot|P10961 Saccharomyces cerevisiae YGL073w HSF1 heat shock transcription factor
YALI1_E16982g	Truncated form of YALI0E13948g, some similarities with uniprot|P10961 Saccharomyces cerevisiae YGL073w HSF1 heat shock transcription factor
YALI1_E17014g	Compare to YALI0E13970g, some similarities with DEHA0D03223g Debaryomyces hansenii
YALI1_E17037g	Compare to YALI0E13992g, similar to Saccharomyces cerevisiae VAC8 (YEL013W); ancestral locus Anc_1.441, highly similar to uniprot|P39968 Saccharomyces cerevisiae YEL013w VAC8 required for vacuole inheritance and protein targeting from the cytoplasm to vacuole
YALI1_E17065g	Compare to YALI0E14014g, similar to Saccharomyces cerevisiae DIN7 (YDR263C) and EXO1 (YOR033C); ancestral locus Anc_5.625, some similarities with uniprot|P39875 Saccharomyces cerevisiae YOR033c DHS1 exonuclease 5-prime end
YALI1_E17069g	Compare to YALI0E14036g, similar to Saccharomyces cerevisiae SFB3 (YHR098C); ancestral locus Anc_5.400, similar to ca|CA4686|IPF9015 Candida albicans IPF9015
YALI1_E17100g	Compare to YALI0E14058g, similar to uniprot|P38922 Saccharomyces cerevisiae YNL004w HRB1, similar to Saccharomyces cerevisiae GBP2 (YCL011C) and HRB1 (YNL004W); ancestral locus Anc_1.408
YALI1_E17141g	Compare to YALI0E14080g, similar to Saccharomyces cerevisiae SGF29 (YCL010C); ancestral locus Anc_1.409, similar to ca|CA5623|IPF502 Candida albicans IPF502
YALI1_E17162g	Compare to YALI0E14102g, similar to Saccharomyces cerevisiae PGS1 (YCL004W); ancestral locus Anc_1.415, similar to uniprot|P25578 Saccharomyces cerevisiae YCL004w PEL1 phosphatidylglycerophosphate synthase
YALI1_E17171g	Compare to YALI0E14124g, similar to Saccharomyces cerevisiae MRPS18 (YNL306W); ancestral locus Anc_3.42, similar to uniprot|P42847 Saccharomyces cerevisiae YNL306w MRPS18 ribosomal protein of the small subunit mitochondrial
YALI1_E17184g	Compare to YALI0E14146g, similar to Saccharomyces cerevisiae YHR140W; ancestral locus Anc_2.97, some similarities with uniprot|Q96WV4 Schizosaccharomyces pombe SPBPJ4664.05 Unspecified membrane protein
YALI1_E17201g	Compare to YALI0E14168g, no similarity
YALI1_E17214g	Truncated form of YALI0E14190g, similar to uniprot|P17505 Saccharomyces cerevisiae YKL085w MDH1 malate dehydrogenase precursor mitochondrial
YALI1_E17243g	Compare to YALI0E14212g, similar to uniprot|Q7SBB3 Neurospora crassa NCU06210.1 predicted protein
YALI1_E17258g	Compare to YALI0E14234g, similar to uniprot|P32386 Saccharomyces cerevisiae YLL048c YBT1 yeast bile transporter
YALI1_E17326g	Compare to YALI0E14256g, similar to uniprot|P33677 Pichia angusta Formate dehydrogenase (NAD-dependent formate dehydrogenase) (FDH)
YALI1_E17355g	Compare to YALI0E14322g, similar to uniprot|P32573 Saccharomyces cerevisiae YNL202w SPS19 peroxisomal 2 4-dienoyl-CoA reductase
YALI1_E17377g	Compare to YALI0E14344g, weakly similar to uniprot|Q8BJ94 Mus musculus UV radiation resistance-associated UvrG protein
YALI1_E17389g	Compare to YALI0E14366g, similar to uniprot|Q9Y763 Phanerochaete chrysosporium 1 4-benzoquinone reductase
YALI1_E17431g	Compare to YALI0E14443g, similar to uniprot|P38221 Saccharomyces cerevisiae YBR029c CDS1 CDP-diacylglycerol synthase singleton, similar to Saccharomyces cerevisiae CDS1 (YBR029C); ancestral locus Anc_3.230
YALI1_E17466g	Compare to YALI0E14465g, similar to uniprot|P25443 Saccharomyces cerevisiae YGL123w SUP44 40S small subunit ribosomal protein, similar to Saccharomyces cerevisiae RPS2 (YGL123W); ancestral locus Anc_6.129
YALI1_E17484g	Compare to YALI0E14487g, weakly similar to uniprot|Q7S3S1 Neurospora crassa NCU04946.1 predicted protein
YALI1_E17508g	Compare to YALI0E14509g, similar to DEHA0C00902g Debaryomyces hansenii
YALI1_E17527g	Compare to YALI0E14575g, similar to Saccharomyces cerevisiae YCL045C; ancestral locus Anc_1.29, some similarities with CA1223|IPF14870 Candida albicans
YALI1_E17574g	Compare to YALI0E14597g, similar to Saccharomyces cerevisiae GRS1 (YBR121C) and GRS2 (YPR081C); ancestral locus Anc_3.381, similar to uniprot|P38088 Saccharomyces cerevisiae YBR121c GRS1 glycine--tRNA ligase
YALI1_E17583g	Compare to YALI0E14619g, similar to Saccharomyces cerevisiae DIB1 (YPR082C); ancestral locus Anc_3.382, highly similar to uniprot|Q06819 Saccharomyces cerevisiae YPR082c DIB1 required for mitosis
YALI1_E17594g	Compare to YALI0E14641g, weakly similar to uniprot|P36531 Saccharomyces cerevisiae YBR122c MRPL36 ribosomal protein YmL36 precursor mitochondrial, similar to Saccharomyces cerevisiae MRPL36 (YBR122C); ancestral locus Anc_3.383
YALI1_E17613g	Compare to YALI0E14663g, uniprot|Q6PRG3 Yarrowia lipolytica RNA polymerase III transcription initiation factor IIIC subunit, similar to Saccharomyces cerevisiae TFC1 (YBR123C); ancestral locus Anc_3.384
YALI1_E17616g	Compare to YALI0E14685g, similar to Saccharomyces cerevisiae TPS1 (YBR126C); ancestral locus Anc_3.386, uniprot|O74932 Yarrowia lipolytica Alpha alpha- trehalose- phosphate synthase [UDP-forming]
YALI1_E17643g	Compare to YALI0E14707g, no similarity
YALI1_E17699g	Compare to YALI0E14729g, similar to uniprot|P33302 Saccharomyces cerevisiae YOR153w PDR5 pleiotropic drug resistance protein (YlABC1 Yarrowia lipolytica ABC transporter)
YALI1_E17754g	Compare to YALI0E14751g, similar to uniprot|P00899 Saccharomyces cerevisiae YER090w TRP2 anthranilate synthase component I, similar to Saccharomyces cerevisiae TRP2 (YER090W); ancestral locus Anc_7.375
YALI1_E17760g	Compare to YALI0E14773g, similar to uniprot|P38806 Saccharomyces cerevisiae YHR090c YNG2 component of NuA4 histone acetyltransferase complex
YALI1_E17786g	Compare to YALI0E14795g, similar to Saccharomyces cerevisiae PTC3 (YBL056W) and PTC2 (YER089C); ancestral locus Anc_7.374, similar to uniprot|P39966 Saccharomyces cerevisiae YER089c PTC2 protein serine/threonine phosphatase of the PP2C family
YALI1_E17811g	Compare to YALI0E14817g, similar to Saccharomyces cerevisiae YBL055C; ancestral locus Anc_7.373, similar to uniprot|P34220 Saccharomyces cerevisiae YBL055c
YALI1_E17829g	Compare to YALI0E14839g, similar to Saccharomyces cerevisiae MDM36 (YPR083W); ancestral locus Anc_3.387, weakly similar to KLLA0D09174g Kluyveromyces lactis
YALI1_E17920g	Compare to YALI0E14927g, similar to Saccharomyces cerevisiae SHP1 (YBL058W); ancestral locus Anc_7.377, weakly similar to uniprot|P34223 Saccharomyces cerevisiae YBL058w SHP1 potential regulatory subunit for GLC7P
YALI1_E17935g	Compare to YALI0E14949g, highly similar to uniprot|P39533 Saccharomyces cerevisiae YJL200c strong similarity to aconitate hydratase
YALI1_E17988g	Compare to YALI0E14971g, some similarities with uniprot|P32338 Saccharomyces cerevisiae YGR044c Zinc finger protein RME1 and other transcription factors, similar to Saccharomyces cerevisiae RME1 (YGR044C); ancestral locus Anc_4.189
YALI1_E18025g	Compare to YALI0E15015g, no similarity, no similarity
YALI1_E18081g	Compare to YALI0E15037g, similar to Saccharomyces cerevisiae SRB7 (YDR308C); ancestral locus Anc_5.329, weakly similar to uniprot|P47822 Saccharomyces cerevisiae YDR308c SRB7 DNA-directed RNA polymerase II holoenzyme and kornberg's mediator (SRB) subcomplex subunit
YALI1_E18095g	Compare to YALI0E15059g, weakly similar to DEHA0E08613g Debaryomyces hansenii
YALI1_E18121g	Compare to YALI0E15081g, similar to uniprot|P33775 Saccharomyces cerevisiae YDL095w PMT1 mannosyltransferase, similar to Saccharomyces cerevisiae YDR307W; ancestral locus Anc_5.328
YALI1_E18143g	Compare to YALI0E15103g, similar to Saccharomyces cerevisiae YDR306C; ancestral locus Anc_5.327, similar to KLLA0C10120g Kluyveromyces lactis
YALI1_E18171g	Compare to YALI0E15125g, similar to uniprot|O60064 Schizosaccharomyces pombe Putative mannose-1-phosphate guanyltransferase
YALI1_E18184g	Compare to YALI0E15136g, gnl|GLV|YALI0E15136g [Yarrowia lipolytica] highly similar to uniprot|P39515 Saccharomyces cerevisiae YJL143W MIM17 mitochondrial import inner membrane translocase subunit TIM17, similar to Saccharomyces cerevisiae TIM17 (YJL143W); ancestral locus Anc_1.206
YALI1_E18212g	Compare to YALI0E15147g, no similarity
YALI1_E18242g	Compare to YALI0E15180g, highly similar to uniprot|Q06389 Saccharomyces cerevisiae YDR373w FRQ1 regulator of phosphatidylinositol- 4-OH kinase protein, similar to Saccharomyces cerevisiae FRQ1 (YDR373W); ancestral locus Anc_5.444
YALI1_E18258g	Compare to YALI0E15202g, some similarities with uniprot|O74728 Schizosaccharomyces pombe
YALI1_E18269g	Compare to YALI0E15224g, similar to Saccharomyces cerevisiae CAT5 (YOR125C); ancestral locus Anc_5.445, similar to uniprot|P41735 Saccharomyces cerevisiae YOR125c CAT5 involved in coenzyme Q (ubiquinone) biosynthesis
YALI1_E18281g	Truncated form of YALI0E15246g, similar to Saccharomyces cerevisiae WWM1 (YFL010C); ancestral locus Anc_8.65, weakly similar to uniprot|O94060 Candida albicans Hypothetical transmembrane protein
YALI1_E18291g	Compare to YALI0E15268g, similar to Saccharomyces cerevisiae YFH1 (YDL120W); ancestral locus Anc_2.309, some similarities with uniprot|Q07540 Saccharomyces cerevisiae YDL120w YFH1 regulates mitochondrial iron accumulation
YALI1_E18303g	Compare to YALI0E15290g, weakly similar to uniprot|P07834 Saccharomyces cerevisiae YFL009w CDC4 cell division control protein
YALI1_E18326g	Compare to YALI0E15312g, similar to Saccharomyces cerevisiae RSM27 (YGR215W); ancestral locus Anc_5.115, similar to uniprot|P53305 Saccharomyces cerevisiae YGR215w RSM27
YALI1_E18378g	Compare to YALI0E15334g, similar to uniprot|P50077 Saccharomyces cerevisiae YGR217w CCH1 calcium channel protein, similar to Saccharomyces cerevisiae CCH1 (YGR217W); ancestral locus Anc_5.113
YALI1_E18411g	Compare to YALI0E15356g, similar to uniprot|O14102 Schizosaccharomyces pombe Spliceosome-associated protein 49
YALI1_E18441g	Compare to YALI0E15378g, uniprot|Q9P4D9 Yarrowia lipolytica Multifunctional beta- oxidation enzyme hydratase-dehydrogenase-epimerase peroxisomal
YALI1_E18480g	Compare to YALI0E15400g, similar to uniprot|Q04458 Saccharomyces cerevisiae YMR110c similarity to aldehyde dehydrogenase
YALI1_E18514g	Compare to YALI0E15466g, similar to Saccharomyces cerevisiae TSR2 (YLR435W); ancestral locus Anc_4.314, similar to uniprot|Q06672 Saccharomyces cerevisiae YLR435w
YALI1_E18539g	Compare to YALI0E15488g, similar to uniprot|P17709 Saccharomyces cerevisiae YCL040w GLK1 aldohexose specific glucokinase, similar to Saccharomyces cerevisiae GLK1 (YCL040W) and EMI2 (YDR516C); ancestral locus Anc_1.33
YALI1_E18622g	Truncated form of YALI0E15510g, weakly similar to uniprot|Q04116 Saccharomyces cerevisiae YDR451c Homeodomain protein, similar to Saccharomyces cerevisiae YHP1 (YDR451C) and YOX1 (YML027W); ancestral locus Anc_5.567
YALI1_E18713g	Truncated form of YALI0E15532g, no similarity
YALI1_E18720g	Compare to YALI0E15554g, weakly similar to DEHA0F26532g Debaryomyces hansenii putative histidinekinase of a two-component signal transducer
YALI1_E18749g	Compare to YALI0E15576g, similar to uniprot|Q05549 Saccharomyces cerevisiae YDR291w, similar to Saccharomyces cerevisiae YDR291W; ancestral locus Anc_5.301
YALI1_E18802g	Compare to YALI0E15598g, similar to uniprot|P27351 Saccharomyces cerevisiae YJR005w YAP80 AP-2 complex subunit beta2-adaptin 78 KD
YALI1_E18843g	Compare to YALI0E15620g, similar to uniprot|P32908 Saccharomyces cerevisiae YFL008w SMC1 chromosome segregation protein, similar to Saccharomyces cerevisiae SMC1 (YFL008W); ancestral locus Anc_8.68
YALI1_E18854g	Compare to YALI0E15642g, similar to Saccharomyces cerevisiae RFA1 (YAR007C); ancestral locus Anc_4.120, some similarities with uniprot|P22336 Saccharomyces cerevisiae YAR007c RFA1 DNA replication factor A 69 KD subunit
YALI1_E18895g	Compare to YALI0E15664g, similar to Saccharomyces cerevisiae ECM30 (YLR436C); ancestral locus Anc_4.315, weakly similar to DEHA0D10483g Debaryomyces hansenii
YALI1_E18903g	Compare to YALI0E15686g, similar to Saccharomyces cerevisiae CBP4 (YGR174C); ancestral locus Anc_5.186, weakly similar to uniprot|P37267 Saccharomyces cerevisiae YGR174c CBP4 ubiquinol--cytochrome-c reductase assembly factor
YALI1_E18927g	Compare to YALI0E15708g, similar to uniprot|P21826 Saccharomyces cerevisiae YIR031c DAL7 malate synthase 2
YALI1_E18961g	Compare to YALI0E15730g, similar to Saccharomyces cerevisiae ERG1 (YGR175C); ancestral locus Anc_5.185, similar to uniprot|P32476 Saccharomyces cerevisiae YGR175c ERG1 squalene monooxygenase
YALI1_E18990g	Compare to YALI0E15796g, similar to Saccharomyces cerevisiae CTR2 (YHR175W); ancestral locus Anc_5.61, similar to uniprot|P38865 Saccharomyces cerevisiae YHR175w CTR2 copper transport protein
YALI1_E19014g	Compare to YALI0E15818g, some similarities with uniprot|P10127 Saccharomyces cerevisiae YGL256w ADH4 alcohol dehydrogenase IV
YALI1_E19036g	Compare to YALI0E15840g, highly similar to uniprot|O93968 Candida boidinii Formate dehydrogenase
YALI1_E19060g	Compare to YALI0E15862g, no similarity
YALI1_E19082g	Compare to YALI0E15884g, weakly similar to uniprot|O94329 Schizosaccharomyces pombe Hypothetical protein, similar to Saccharomyces cerevisiae PSF2 (YJL072C); ancestral locus Anc_1.300
YALI1_E19098g	Compare to YALI0E15906g, similar to Saccharomyces cerevisiae YLR456W and YPR172W; ancestral locus Anc_7.529, similar to uniprot|Q9UUK0 Schizosaccharomyces pombe Hypothetical 21.7 kDa protein
YALI1_E19105g	Compare to YALI0E15928g, weakly similar to uniprot|P54791 Saccharomyces cerevisiae YPR162c ORC4 origin recognition complex 56 KD subunit, similar to Saccharomyces cerevisiae ORC4 (YPR162C) and RIF2 (YLR453C); ancestral locus Anc_7.516
YALI1_E19138g	Compare to YALI0E15994g, similar to Saccharomyces cerevisiae SEC28 (YIL076W); ancestral locus Anc_7.278, weakly similar to uniprot|P40509 Saccharomyces cerevisiae YIL076w SEC28 epsilon-COP coatomer subunitt
YALI1_E19172g	Compare to YALI0E16016g, similar to Saccharomyces cerevisiae FAT1 (YBR041W); ancestral locus Anc_3.243, similar to uniprot|P38225 Saccharomyces cerevisiae YBR041w FAT1 very long-chain fatty acyl-CoA synthetase singleton
YALI1_E19201g	Compare to YALI0E16038g, similar to Saccharomyces cerevisiae CDC14 (YFR028C); ancestral locus Anc_1.349, similar to uniprot|Q00684 Saccharomyces cerevisiae YFR028c CDC14 dual specificity phosphatase
YALI1_E19263g	Compare to YALI0E16060g, similar to uniprot|P39105 Saccharomyces cerevisiae YMR008c PLB1 phospholipase B (lysophospholipase)
YALI1_E19314g	Compare to YALI0E16126g, weakly similar to uniprot|P32317 Saccharomyces cerevisiae YEL052w AFG1 ATPase family gene
YALI1_E19316g	Compare to YALI0E16148g, no similarity, similar to Saccharomyces cerevisiae SAM35 (YHR083W); ancestral locus Anc_5.378
YALI1_E19327g	similar to Saccharomyces cerevisiae YPR170W-B; ancestral locus Anc_7.526
YALI1_E19337g	Compare to YALI0E16170g, similar to uniprot|O74161 Candida albicans Chitin biosynthesis protein CHS5, similar to Saccharomyces cerevisiae CHS5 (YLR330W); ancestral locus Anc_4.156
YALI1_E19371g	Compare to YALI0E16214g, similar to uniprot|P53212 Saccharomyces cerevisiae YGR021w, similar to Saccharomyces cerevisiae YGR021W; ancestral locus Anc_4.158
YALI1_E19403g	Compare to YALI0E16236g, similar to Saccharomyces cerevisiae STE12 (YHR084W); ancestral locus Anc_5.379, some similarities with uniprot|P43079 Candida albicans CaCPH1 Transcription factor
YALI1_E19458g	Compare to YALI0E16258g, weakly similar to uniprot|Q9UU96 Schizosaccharomyces pombe Hypothetical 83.3 kDa protein, similar to Saccharomyces cerevisiae GRC3 (YLL035W); ancestral locus Anc_4.22
YALI1_E19483g	Compare to YALI0E16280g, weakly similar to uniprot|Q04177 Saccharomyces cerevisiae YDR398W snoRNA binding activity, similar to Saccharomyces cerevisiae UTP5 (YDR398W); ancestral locus Anc_5.490
YALI1_E19494g	Compare to YALI0E16294g, similar to Saccharomyces cerevisiae NCB2 (YDR397C); ancestral locus Anc_5.489, similar to uniprot|Q92317 Saccharomyces cerevisiae YDR397c YNC2beta functional homolog of human NC2beta/Dr1
YALI1_E19508g	Compare to YALI0E16324g, similar to Saccharomyces cerevisiae SXM1 (YDR395W); ancestral locus Anc_5.488, similar to uniprot|P46970 Saccharomyces cerevisiae YJR132w NMD5 NAM7P interacting protein
YALI1_E19557g	Compare to YALI0E16346g, highly similar to uniprot|O13426 Candida albicans Serine hydroxymethyltransferase cytosolic (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) (SHMII)
YALI1_E19603g	Compare to YALI0E16368g, similar to uniprot|P39692 Saccharomyces cerevisiae YFR030w MET10 sulfite reductase flavin-binding subunit, similar to Saccharomyces cerevisiae MET10 (YFR030W); ancestral locus Anc_7.185
YALI1_E19620g	Compare to YALI0E16390g, no similarity
YALI1_E19647g	Compare to YALI0E16434g, similar to uniprot|P36107 Saccharomyces cerevisiae YKL004w AUR1 aureobasidin-resistance protein
YALI1_E19669g	Compare to YALI0E16456g, similar to Saccharomyces cerevisiae NUT2 (YPR168W); ancestral locus Anc_7.524, similar to uniprot|Q06213 Saccharomyces cerevisiae YPR168w NUT2 negative transcription regulator from artifical reporters
YALI1_E19682g	Compare to YALI0E16478g, similar to uniprot|P40556 Saccharomyces cerevisiae YIL006w Putative mitochondrial carrier
YALI1_E19696g	Compare to YALI0E16500g, similar to uniprot|Q9P4V6 Candida boidinii RNA- binding protein
YALI1_E19714g	Compare to YALI0E16533g, weakly similar to uniprot|P01149 Saccharomyces cerevisiae YPL187w MFalpha1 mating pheromone alpha-1 precursor
YALI1_E19736g	Compare to YALI0E16555g, no similarity
YALI1_E19757g	Compare to YALI0E16577g, some similarities with uniprot|P34233 Saccharomyces cerevisiae YKL185w ASH1 negative regulator of HO transcription, similar to Saccharomyces cerevisiae ASH1 (YKL185W); ancestral locus Anc_4.283
YALI1_E19795g	Compare to YALI0E16599g, uniprot|P78980 Yarrowia lipolytica Peroxisomal membrane protein
YALI1_E19826g	Compare to YALI0E16621g, similar to Saccharomyces cerevisiae YKL133C and YMR115W; ancestral locus Anc_2.433, weakly similar to uniprot|Q04472 Saccharomyces cerevisiae YMR115w
YALI1_E19852g	Compare to YALI0E16643g, similar to Saccharomyces cerevisiae AGX1 (YFL030W); ancestral locus Anc_8.37, similar to uniprot|P43567 Saccharomyces cerevisiae YFL030w
YALI1_E19871g	Compare to YALI0E16665g, similar to uniprot|Q9UTQ5 Schizosaccharomyces pombe Dnaj protein
YALI1_E19883g	Compare to YALI0E16687g, similar to DEHA0E02200g Debaryomyces hansenii, similar to Saccharomyces cerevisiae JLP2 (YMR132C); ancestral locus Anc_2.400
YALI1_E19902g	Compare to YALI0E16709g, similar to Saccharomyces cerevisiae COX12 (YLR038C); ancestral locus Anc_2.403, similar to uniprot|Q01519 Saccharomyces cerevisiae YLR038c COX12 cytochrome-c oxidase subunit VIB
YALI1_E19958g	Compare to YALI0E16753g, similar to uniprot|P47165 Saccharomyces cerevisiae YJR133w XPT1 xanthine phosphoribosyl transferase
YALI1_E20016g	Compare to YALI0E16775g, similar to uniprot|CAD79694 Neurospora crassa 49D12. 190 Related to ABC transporter
YALI1_E20049g	Compare to YALI0E16797g, similar to uniprot|P40345 Saccharomyces cerevisiae YNR008w LRO1 a lecithin cholesterol acyltransferase-like gene mediates diacylglycerol esterification singleton, similar to Saccharomyces cerevisiae LRO1 (YNR008W); ancestral locus Anc_6.298
YALI1_E20070g	Compare to YALI0E16819g, similar to DEHA0E03113g Debaryomyces hansenii
YALI1_E20099g	Compare to YALI0E16841g, no similarity
YALI1_E20125g	Compare to YALI0E16863g, some similarities with uniprot|P38741 Saccharomyces cerevisiae YHL024w RIM4 No sporulation
YALI1_E20142g	Compare to YALI0E16885g, similar to Saccharomyces cerevisiae SBP1 (YHL034C) and RNP1 (YLL046C); ancestral locus Anc_4.7, weakly similar to DEHA0F03850g Debaryomyces hansenii
YALI1_E20159g	Compare to YALI0E16907g, weakly similar to uniprot|P20485 Saccharomyces cerevisiae YLR133w CKI1 choline kinase, similar to Saccharomyces cerevisiae EKI1 (YDR147W) and CKI1 (YLR133W); ancestral locus Anc_8.328
YALI1_E20192g	Compare to YALI0E16929g, similar to uniprot|P19262 Saccharomyces cerevisiae YDR148c KGD2 2-oxoglutarate dehydrogenase complex E2 component, similar to Saccharomyces cerevisiae KGD2 (YDR148C); ancestral locus Anc_8.329
YALI1_E20215g	Compare to YALI0E16951g, no similarity
YALI1_E20229g	Compare to YALI0E16973g, some similarities with uniprot|P08153 Saccharomyces cerevisiae YDR146c SWI5 transcription factor
YALI1_E20269g	Compare to YALI0E16995g, similar to Saccharomyces cerevisiae SEC23 (YPR181C); ancestral locus Anc_7.537, similar to uniprot|P15303 Saccharomyces cerevisiae YPR181c SEC23 component of COPII coat of ER-golgi vesicles
YALI1_E20279g	Compare to YALI0E17017g, similar to Saccharomyces cerevisiae GAB1 (YLR459W); ancestral locus Anc_7.538, similar to uniprot|P41733 Saccharomyces cerevisiae YLR459w CDC91 cell division control protein
YALI1_E20312g	Compare to YALI0E17083g, no similarity
YALI1_E20361g	Compare to YALI0E17105g, similar to Saccharomyces cerevisiae DNF2 (YDR093W) and DNF1 (YER166W); ancestral locus Anc_8.231, similar to uniprot|Q12675 Saccharomyces cerevisiae YDR093w Potential phospholipid-transporting ATPase 2
YALI1_E20423g	Compare to YALI0E17127g, weakly similar to uniprot|Q7SFJ8 Neurospora crassa NCU08621.1
YALI1_E20453g	Compare to YALI0E17149g, no similarity
YALI1_E20463g	Compare to YALI0E17171g, similar to ca|CA1552|CaPUT1 Candida albicans CaPUT1 proline oxidase (by homology)
YALI1_E20467g	Compare to YALI0E17193g, weakly similar to uniprot|Q08204 Saccharomyces cerevisiae YOL034w involved in DNA repair
YALI1_E20510g	Compare to YALI0E17215g, some similarities with uniprot|P32338 Saccharomyces cerevisiae YGR044c RME1 zinc-finger transcription factor
YALI1_E20544g	Compare to YALI0E17281g, similar to uniprot|Q12335 Saccharomyces cerevisiae YDR032c PST2 (Protoplast secreted protein 2 precursor) and Phanerochaete chrysosporium 1 4-benzoquinone reductase
YALI1_E20569g	Compare to YALI0E17303g, weakly similar to uniprot|CAD60707 Podospora anserina CAD60707
YALI1_E20596g	Compare to YALI0E17325g, similar to Saccharomyces cerevisiae SDS24 (YBR214W) and SDS23 (YGL056C); ancestral locus Anc_6.107, some similarities with uniprot|P38314 Saccharomyces cerevisiae YBR214w SDS24
YALI1_E20626g	Compare to YALI0E17347g, similar to Saccharomyces cerevisiae SUR2 (YDR297W); ancestral locus Anc_5.314, some similarities with uniprot|P38992 Saccharomyces cerevisiae YDR297w SUR2 required for the hydroxylation of C-4 of the sphingoid moiety of ceramide
YALI1_E20635g	Compare to YALI0E17369g, similar to Saccharomyces cerevisiae MHR1 (YDR296W); ancestral locus Anc_5.313, similar to uniprot|Q06630 Saccharomyces cerevisiae YDR296w MHR1 a direct transcriptional repressor
YALI1_E20666g	Compare to YALI0E17391g, weakly similar to wi|NCU00101.1 Neurospora crassa NCU00101.1 hypothetical protein, similar to Saccharomyces cerevisiae PBN1 (YCL052C); ancestral locus Anc_1.14
YALI1_E20677g	Compare to YALI0E17413g, similar to Saccharomyces cerevisiae VPS35 (YJL154C); ancestral locus Anc_1.193, similar to uniprot|P34110 Saccharomyces cerevisiae YJL154c VPS35 protein-sorting protein vacuolar
YALI1_E20709g	Compare to YALI0E17435g, no similarity
YALI1_E20729g	Compare to YALI0E17457g, similar to uniprot|P32331 Saccharomyces cerevisiae YPR058w YMC1 mitochondrial carrier protein (MCF), similar to Saccharomyces cerevisiae YMC2 (YBR104W) and YMC1 (YPR058W); ancestral locus Anc_3.348
YALI1_E20751g	Compare to YALI0E17479g, similar to uniprot|P32178 Saccharomyces cerevisiae YPR060c ARO7 chorismate mutase, similar to Saccharomyces cerevisiae ARO7 (YPR060C); ancestral locus Anc_3.349
YALI1_E20766g	Compare to YALI0E17545g, weakly similar to uniprot|P09950 Saccharomyces cerevisiae YDR232w HEM1 5-aminolevulinate synthase
YALI1_E20787g	Truncated form of YALI0E17567g, no similarity possibly noncoding
YALI1_E20794g	Compare to YALI0E17589g, similar to uniprot|Q06593 Saccharomyces cerevisiae YPR194C
YALI1_E20845g	Compare to YALI0E17611g, weakly similar to uniprot|O43119 Aspergillus niger Peptide-N4-(N-acetyl-beta-D-glucosaminyl) asparaginase amidase N
YALI1_E20885g	Compare to YALI0E17633g, similar to uniprot|P32604 Saccharomyces cerevisiae YJL155c FBP26 fructose-2 6-bisphosphatase
YALI1_E20923g	Compare to YALI0E17655g, some similarities with uniprot|Q8X0B4 Neurospora crassa Related to hormone-sensitive lipase
YALI1_E20963g	Compare to YALI0E17677g, similar to uniprot|Q03419 Saccharomyces cerevisiae YDR492w or uniprot|Q12442 Saccharomyces cerevisiae YOL002C
YALI1_E20995g	Compare to YALI0E17699g, similar to uniprot|O13899 Schizosaccharomyces pombe CDP- alcohol phosphatidyltransferase
YALI1_E21026g	Compare to YALI0E17721g, similar to Saccharomyces cerevisiae GPI19 (YDR437W); ancestral locus Anc_5.549, similar to DEHA0C06160g Debaryomyces hansenii
YALI1_E21053g	Compare to YALI0E17743g, similar to uniprot|O74526 Schizosaccharomyces pombe Ser/thr protein kinase
YALI1_E21097g	Compare to YALI0E17765g, similar to uniprot|Q9C1M3 Emericella nidulans Septin
YALI1_E21128g	Compare to YALI0E17787g, uniprot|Q9UW07 Yarrowia lipolytica Alcohol dehydrogenase 2
YALI1_E21147g	Compare to YALI0E17809g, similar to Saccharomyces cerevisiae TAF11 (YML015C); ancestral locus Anc_5.546, weakly similar to uniprot|Q9US54 Schizosaccharomyces pombe Putative transcription initiation factor tfIID subunit
YALI1_E21183g	Compare to YALI0E17831g, similar to uniprot|Q06010 Saccharomyces cerevisiae YLR389c STE23 protease involved in a-factor processing
YALI1_E21200g	Compare to YALI0E17853g, some similarities with uniprot|Q8NIS5 Neurospora crassa Related to traf5 protein
YALI1_E21203g	Compare to YALI0E17875g, similar to Saccharomyces cerevisiae SYN8 (YAL014C); ancestral locus Anc_7.92, weakly similar to uniprot|P31377 Saccharomyces cerevisiae YAL014C STX8 Syntaxin 8 (SNARE protein related to mammalian syntaxin 8)
YALI1_E21222g	Compare to YALI0E17897g, weakly similar to uniprot|Q96U62 Neurospora crassa Conserved hypothetical protein
YALI1_E21230g	Compare to YALI0E17919g, similar to uniprot|P48525 Saccharomyces cerevisiae YOL033w MSE1 glutamyl-tRNA synthetase mitochondrial singleton, similar to Saccharomyces cerevisiae MSE1 (YOL033W); ancestral locus Anc_7.100
YALI1_E21282g	Truncated form of YALI0E17941g, some similarities with DEHA0E19745g Debaryomyces hansenii
YALI1_E21312g	Compare to YALI0E17963g, similar to uniprot|Q06892 Saccharomyces cerevisiae YPL188w POS5 protein
YALI1_E21345g	Compare to YALI0E17985g, similar to Saccharomyces cerevisiae YDR341C and MSR1 (YHR091C); ancestral locus Anc_5.393, similar to uniprot|Q05506 Saccharomyces cerevisiae YDR341c arginyl-tRNA synthetase cytosolic
YALI1_E21364g	Compare to YALI0E18007g, no similarity
YALI1_E21406g	Compare to YALI0E18029g, similar to uniprot|P41921 Saccharomyces cerevisiae YPL091w GLR1 glutathione reductase (NADPH), similar to Saccharomyces cerevisiae GLR1 (YPL091W); ancestral locus Anc_8.568
YALI1_E21430g	Compare to YALI0E18051g, some similarities with uniprot|Q12030 Saccharomyces cerevisiae YDR167W Transcription initiation factor TFIID 23 kDa subunit, similar to Saccharomyces cerevisiae TAF10 (YDR167W); ancestral locus Anc_8.360
YALI1_E21443g	Compare to YALI0E18073g, no similarity
YALI1_E21478g	Compare to YALI0E18095g, weakly similar to uniprot|Q09752 Schizosaccharomyces pombe Multidrug resistance protein fnx1
YALI1_E21513g	Compare to YALI0E18117g, similar to uniprot|P39940 Saccharomyces cerevisiae YER125W Ubiquitin--protein ligase RSP5
YALI1_E21552g	Compare to YALI0E18139g, similar to Saccharomyces cerevisiae TPO5 (YKL174C); ancestral locus Anc_1.173, similar to uniprot|Q09887 Schizosaccharomyces pombe SPCC584.13 Putative amino-acid permease
YALI1_E21615g	Truncated form of YALI0E18161g, no similarity
YALI1_E21683g	Compare to YALI0E18194g, no similarity
YALI1_E21832g	Compare to YALI0E18216g, no similarity
YALI1_E21915g	Compare to YALI0E18238g, similar to uniprot|P17649 Saccharomyces cerevisiae YGR019w UGA1 4-aminobutyrate aminotransferase (GABA transaminase)
YALI1_E21962g	Compare to YALI0E18260g, similar to Saccharomyces cerevisiae SET2 (YJL168C); ancestral locus Anc_1.170, weakly similar to uniprot|P46995 Saccharomyces cerevisiae YJL168c EZL1 enhancer of zeste-like
YALI1_E21983g	Compare to YALI0E18282g, similar to Saccharomyces cerevisiae HMT1 (YBR034C); ancestral locus Anc_3.233, similar to uniprot|P38074 Saccharomyces cerevisiae YBR034c HMT1 hnRNP methyltransferase singleton
YALI1_E22004g	Compare to YALI0E18304g, similar to Saccharomyces cerevisiae YJL103C; ancestral locus Anc_1.260, some similarities with uniprot|P38140 Saccharomyces cerevisiae YBR239c Putative 60.3 kDa transcriptional regulatory protein
YALI1_E22029g	Compare to YALI0E18326g, similar to Saccharomyces cerevisiae YKR023W; ancestral locus Anc_1.259, similar to uniprot|P36119 Saccharomyces cerevisiae YKR023w Hypothetical 60.8 kDa protein
YALI1_E22041g	Truncated form of YALI0E18348g, similar to uniprot|P14065 Saccharomyces cerevisiae YOR120w GCY1 galactose-induced protein of aldo/keto reductase family
YALI1_E22070g	Truncated form of YALI0E18414g, similar to uniprot|P40357 Saccharomyces cerevisiae YGR009c SEC9 protein transport protein
YALI1_E22111g	Compare to YALI0E18436g, weakly similar to uniprot|P53983 Saccharomyces cerevisiae YNL008c ubiquitin-protein ligase activity, similar to Saccharomyces cerevisiae ASI1 (YMR119W) and ASI3 (YNL008C); ancestral locus Anc_2.419
YALI1_E22117g	Compare to YALI0E18458g, similar to uniprot|Q6C722 Yarrowia lipolytica YALI0E04422g
YALI1_E22126g	Compare to YALI0E18480g, similar to Saccharomyces cerevisiae CDC37 (YDR168W); ancestral locus Anc_8.361, similar to uniprot|P06101 Saccharomyces cerevisiae YDR168w CDC37 cell division control protein
YALI1_E22159g	Compare to YALI0E18502g, similar to DEHA0F24992g Debaryomyces hansenii
YALI1_E22207g	Compare to YALI0E18524g, similar to Saccharomyces cerevisiae HSL7 (YBR133C); ancestral locus Anc_3.399, weakly similar to uniprot|P38274 Saccharomyces cerevisiae YBR133c HSL7 adapter in a regulatory pathway that relieves tyrosine phosphorylation of CDC28 singleton
YALI1_E22218g	Compare to YALI0E18546g, similar to Saccharomyces cerevisiae HSP42 (YDR171W); ancestral locus Anc_8.369, some similarities with uniprot|Q12329 Saccharomyces cerevisiae YDR171w HSP42
YALI1_E22238g	Compare to YALI0E18568g, uniprot|Q05493 Yarrowia lipolytica 3-ketoacyl-CoA thiolase peroxisomal precursor
YALI1_E22262g	Compare to YALI0E18590g, similar to uniprot|Q9UUS5 Colletotrichum gloeosporioides Malonyl CoA-acyl carrier protein transacylase, similar to Saccharomyces cerevisiae MCT1 (YOR221C); ancestral locus Anc_8.643
YALI1_E22265g	Compare to YALI0E18612g, weakly similar to DEHA0G04972g Debaryomyces hansenii, similar to Saccharomyces cerevisiae YML002W; ancestral locus Anc_6.20
YALI1_E22303g	Compare to YALI0E18634g, similar to uniprot|P36013 Saccharomyces cerevisiae YKL029c MAE1 malic enzyme, similar to Saccharomyces cerevisiae MAE1 (YKL029C); ancestral locus Anc_2.529
YALI1_E22329g	Compare to YALI0E18656g, similar to KLLA0C08657g Kluyveromyces lactis
YALI1_E22364g	Compare to YALI0E18678g, some similarities with uniprot|P87233 Schizosaccharomyces pombe Hypothetical protein
YALI1_E22383g	Compare to YALI0E18700g, weakly similar to uniprot|Q6C7F6 Yarrowia lipolytica YALI0E01210g
YALI1_E22439g	Compare to YALI0E18744g, no similarity
YALI1_E22543g	Compare to YALI0E18788g, uniprot|Q8TFK5 Yarrowia lipolytica Cell wall protein
YALI1_E22555g	Truncated form of YALI0E18810g, no similarity
YALI1_E22576g	Compare to YALI0E18832g, similar to Saccharomyces cerevisiae POL12 (YBL035C); ancestral locus Anc_3.322, similar to uniprot|Q8X0K1 Neurospora crassa Related to POL12 (DNA-directed DNA polymerase alpha)
YALI1_E22592g	Compare to YALI0E18854g, some similarities with uniprot|P87058 Schizosaccharomyces pombe La protein homolog (La ribonucleoprotein) (La autoantigen homolog)
YALI1_E22613g	Compare to YALI0E18876g, weakly similar to uniprot|P41903 Saccharomyces cerevisiae YJR019c TES1 thioesterase peroxisomal
YALI1_E22633g	Compare to YALI0E18898g, similar to Saccharomyces cerevisiae SPO14 (YKR031C); ancestral locus Anc_1.251, weakly similar to uniprot|P36126 Saccharomyces cerevisiae YKR031c SPO14 phospholipase D
YALI1_E22697g	Compare to YALI0E18920g, no similarity
YALI1_E22718g	Compare to YALI0E18942g, similar to Saccharomyces cerevisiae SEC59 (YMR013C); ancestral locus Anc_2.560, some similarities with uniprot|P20048 Saccharomyces cerevisiae YMR013c SEC59 dolichol kinase
YALI1_E22736g	Compare to YALI0E18964g, similar to uniprot|P33333 Saccharomyces cerevisiae YDL052c SLC1 fatty acyltransferase
YALI1_E22758g	Truncated form of YALI0E18986g, highly similar to uniprot|P04838 Saccharomyces cerevisiae YLL039c UBI4 ubiquitin
YALI1_E22787g	Compare to YALI0E19008g, similar to uniprot|P23287 Saccharomyces cerevisiae YLR433c CNA1 calcineurin B catalytic subunit
YALI1_E22840g	Compare to YALI0E19030g, no similarity
YALI1_E22859g	Compare to YALI0E19052g, weakly similar to DEHA0D10505g Debaryomyces hansenii, similar to Saccharomyces cerevisiae LOT5 (YKL183W); ancestral locus Anc_4.281
YALI1_E22865g	Compare to YALI0E19074g, similar to uniprot|P40558 Saccharomyces cerevisiae YIL003w
YALI1_E22884g	Compare to YALI0E19140g, similar to uniprot|Q6CB78 Yarrowia lipolytica YALI0C21274g
YALI1_E22902g	Compare to YALI0E19162g, no similarity
YALI1_E22921g	Compare to YALI0E19184g, similar to uniprot|Q8RY11 Arabidopsis thaliana AT3g05350/T12H1_32 putative X-pro dipeptidase, similar to Saccharomyces cerevisiae YLL029W; ancestral locus Anc_4.29
YALI1_E22961g	Compare to YALI0E19206g, similar to Saccharomyces cerevisiae ISA1 (YLL027W); ancestral locus Anc_4.31, similar to uniprot|Q07821 Saccharomyces cerevisiae YLL027w ISA1 mitochondrial protein required for normal iron metabolism
YALI1_E22988g	Compare to YALI0E19228g, weakly similar to uniprot|AAM08676 Aspergillus fumigatus AAM08676 Ste50p, similar to Saccharomyces cerevisiae STE50 (YCL032W); ancestral locus Anc_1.42
YALI1_E23014g	Compare to YALI0E19250g, no similarity
YALI1_E23038g	Compare to YALI0E19272g, weakly similar to uniprot|Q12350 Saccharomyces cerevisiae YPR061c related to dnaJ proteins
YALI1_E23068g	Compare to YALI0E19294g, similar to uniprot|Q06593 Saccharomyces cerevisiae YPR194c OPT2 putative oligopeptide transporter
YALI1_E23136g	Compare to YALI0E19338g, similar to uniprot|Q12691 Saccharomyces cerevisiae YDR038c ENA5 P-type ATPase involved in Na+ efflux
YALI1_E23184g	Compare to YALI0E19360g, highly similar to uniprot|P09733 Saccharomyces cerevisiae YML085c TUB1 alpha-1 tubulin or uniprot|P09734 Saccharomyces cerevisiae YML124c TUB3 alpha-3 tubulin
YALI1_E23223g	Compare to YALI0E19382g, weakly similar to uniprot|P46678 Saccharomyces cerevisiae YNL039w Transcription factor TFC5 TFIIIB, similar to Saccharomyces cerevisiae BDP1 (YNL039W); ancestral locus Anc_2.282
YALI1_E23229g	Compare to YALI0E19404g, similar to DEHA0C18216g Debaryomyces hansenii, similar to Saccharomyces cerevisiae YNL035C; ancestral locus Anc_2.283
YALI1_E23256g	Compare to YALI0E19426g, weakly similar to uniprot|Q96UH1 Cryptococcus neoformans CIG Cytokine inducing-glycoprotein
YALI1_E23292g	Compare to YALI0E19448g, weakly similar to uniprot|P40553 Saccharomyces cerevisiae YIL010W Disrupter of telomere silencing protein 5, similar to Saccharomyces cerevisiae DOT5 (YIL010W); ancestral locus Anc_7.126
YALI1_E23302g	Compare to YALI0E19470g, similar to Saccharomyces cerevisiae NAS2 (YIL007C); ancestral locus Anc_7.130, weakly similar to uniprot|P40555 Saccharomyces cerevisiae YIL007c Probable 26S proteasome regulatory subunit p27 (Proteasome non-ATPase subunit 2) [NAS2]
YALI1_E23313g	Compare to YALI0E19481g, gnl|GLV|YALI0E19481g [Yarrowia lipolytica] similar to uniprot|Q9C245 Neurospora crassa ubiquitin related modifier URM1, similar to Saccharomyces cerevisiae URM1 (YIL008W); ancestral locus Anc_7.129
YALI1_E23325g	Compare to YALI0E19492g, weakly similar to DEHA0B13453g Debaryomyces hansenii, similar to Saccharomyces cerevisiae YEL001C; ancestral locus Anc_7.144
YALI1_E23348g	Compare to YALI0E19514g, similar to Saccharomyces cerevisiae PAT1 (YCR077C); ancestral locus Anc_6.350, weakly similar to DEHA0C09724g Debaryomyces hansenii and uniprot|P25644 Saccharomyces cerevisiae YCR077c (PAT1) topoisomerase II-associated protein
YALI1_E23389g	Compare to YALI0E19536g, weakly similar to uniprot|P39993 Saccharomyces cerevisiae YEL022w GEA2 GDP/GTP exchange factor for ARF
YALI1_E23472g	Compare to YALI0E19558g, similar to Saccharomyces cerevisiae YCR061W; ancestral locus Anc_6.329, weakly similar to uniprot|P25639 Saccharomyces cerevisiae YCR061w
YALI1_E23525g	Compare to YALI0E19635g, no similarity
YALI1_E23555g	Compare to YALI0E19657g, weakly similar to uniprot|P53839 Saccharomyces cerevisiae YNL274c similarity to glycerate- and formate- dehydrogenases
YALI1_E23578g	Truncated form of YALI0E19679g, similar to Saccharomyces cerevisiae PKP1 (YIL042C); ancestral locus Anc_7.222, weakly similar to uniprot|P40530 Saccharomyces cerevisiae YIL042c related to rat branched-chain alpha- ketoacid dehydrogenase kinase
YALI1_E23610g	Compare to YALI0E19701g, highly similar to uniprot|P39938 Saccharomyces cerevisiae YGL189c RPS26A 40S small subunit ribosomal protein S26e.c7 or uniprot|P39939 Saccharomyces cerevisiae YER131w RPS26B 40S small subunit ribosomal protein S26e- c5, similar to Saccharomyces cerevisiae RPS26B (YER131W) and RPS26A (YGL189C); ancestral locus Anc_8.149
YALI1_E23635g	Compare to YALI0E19723g, similar to Saccharomyces cerevisiae COX4 (YGL187C); ancestral locus Anc_8.148, similar to uniprot|P04037 Saccharomyces cerevisiae YGL187c COX4 cytochrome-c oxidase chain IV
YALI1_E23659g	Compare to YALI0E19745g, similar to uniprot|Q9HEM5 Neurospora crassa NCU01320.1 hypothetical protein (AL451017) related to microsomal glutathione S-transferase 3
YALI1_E23691g	Compare to YALI0E19767g, similar to Saccharomyces cerevisiae COP1 (YDL145C); ancestral locus Anc_7.322, similar to uniprot|P53622 Saccharomyces cerevisiae YDL145c RET1 coatomer complex alpha chain of secretory pathway vesicles
YALI1_E23736g	Compare to YALI0E19789g, weakly similar to uniprot|Q897E2 Clostridium tetani 3- oxoacyl-[acyl-carrier-protein] reductase
YALI1_E23749g	Compare to YALI0E19811g, some similarities with uniprot|Q872V6 Neurospora crassa B2G14.140, similar to Saccharomyces cerevisiae PCL10 (YGL134W) and PCL8 (YPL219W); ancestral locus Anc_6.236
YALI1_E23790g	Compare to YALI0E19899g, weakly similar to uniprot|Q7RZL5 Neurospora crassa NCU00350.1
YALI1_E23809g	Compare to YALI0E19921g, weakly similar to uniprot|Q7S521 Neurospora crassa NCU05887.1
YALI1_E23824g	Compare to YALI0E19943g, similar to KLLA0C00286g Kluyveromyces lactis
YALI1_E23854g	Compare to YALI0E19965g, some similarities with uniprot|P32338 Saccharomyces cerevisiae YGR044c RME1 and other zinc-finger transcription factors
YALI1_E23880g	Compare to YALI0E19987g, similar to Saccharomyces cerevisiae VPS29 (YHR012W); ancestral locus Anc_5.599, similar to uniprot|P38759 Saccharomyces cerevisiae YHR012w PEP11 involved in vacuolar protein sorting
YALI1_E23899g	Compare to YALI0E20009g, highly similar to uniprot|P42942 Saccharomyces cerevisiae YGR210c, similar to Saccharomyces cerevisiae YGR210C; ancestral locus Anc_5.121
YALI1_E23912g	Compare to YALI0E20031g, similar to uniprot|P38011 Saccharomyces cerevisiae YMR116c ASC1 40S small subunit ribosomal protein
YALI1_E23945g	Compare to YALI0E20053g, weakly similar to uniprot|Q99278 Saccharomyces cerevisiae YMR112c MED11 mediator complex hypotheticdal start, similar to Saccharomyces cerevisiae MED11 (YMR112C); ancestral locus Anc_2.436
YALI1_E23961g	Compare to YALI0E20119g, similar to uniprot|P40029 Saccharomyces cerevisiae YER042w MXR1 responsible for the reduction of methionine sulfoxide
YALI1_E23967g	Compare to YALI0E20141g, similar to uniprot|Q12012 Saccharomyces cerevisiae YOR289w
YALI1_E23988g	Compare to YALI0E20163g, weakly similar to uniprot|Q9C0N5 Candida albicans CaNAG2 N-acetyl-glucosamine-6-phosphate deacetylase
YALI1_E23994g	Compare to YALI0E20185g, similar to CA5858|IPF380 Candida albicans
YALI1_E24028g	Compare to YALI0E20207g, similar to Saccharomyces cerevisiae YLR446W; ancestral locus Anc_4.336, weakly similar to uniprot|P04807 Saccharomyces cerevisiae YGL253w HXK2 hexokinase II
YALI1_E24052g	Compare to YALI0E20229g, no similarity
YALI1_E24078g	Compare to YALI0E20251g, no similarity
YALI1_E24113g	Compare to YALI0E20273g, similar to uniprot|CAD70735 Neurospora crassa 64C2. 200 Related to putative tartrate transporter
YALI1_E24128g	Compare to YALI0E20295g, no similarity
YALI1_E24149g	Compare to YALI0E20361g, similar to Saccharomyces cerevisiae SPE2 (YOL052C); ancestral locus Anc_8.800, similar to uniprot|P21182 Saccharomyces cerevisiae YOL052c SPE2 adenosylmethionine decarboxylase precursor
YALI1_E24174g	Compare to YALI0E20383g, some similarities with uniprot|P38216 Saccharomyces cerevisiae YBR016w
YALI1_E24201g	Compare to YALI0E20405g, weakly similar to uniprot|O48868 Populus balsamifera 4- coumarate:CoA ligase 2
YALI1_E24245g	Compare to YALI0E20427g, weakly similar to uniprot|P11636 Neurospora crassa Quinate permease (Quinate transporter)
YALI1_E24287g	Compare to YALI0E20449g, similar to Saccharomyces cerevisiae YHP1 (YDR451C) and YOX1 (YML027W); ancestral locus Anc_5.567, weakly similar to uniprot|P34161 Saccharomyces cerevisiae YML027w YOX1 homoeodomain protein
YALI1_E24318g	Compare to YALI0E20471g, similar to uniprot|CAD70735 Neurospora crassa 64C2. 200 Related to putative tartrate transporter
YALI1_E24343g	Compare to YALI0E20493g, similar to Saccharomyces cerevisiae YML6 (YML025C); ancestral locus Anc_5.565, similar to uniprot|P51998 Saccharomyces cerevisiae YML025c YML6 ribosomal protein mitochondrial
YALI1_E24360g	Compare to YALI0E20515g, weakly similar to DEHA0G10219g Debaryomyces hansenii
YALI1_E24391g	Compare to YALI0E20537g, similar to uniprot|P35817 Saccharomyces cerevisiae YLR399c BDF1 sporulation protein
YALI1_E24428g	Compare to YALI0E20559g, no similarity
YALI1_E24442g	Compare to YALI0E20581g, similar to uniprot|P38701 Saccharomyces cerevisiae YHL015w URP2 ribosomal protein, similar to Saccharomyces cerevisiae RPS20 (YHL015W); ancestral locus Anc_2.550
YALI1_E24461g	Compare to YALI0E20603g, similar to uniprot|Q96X05 Emericella nidulans Sno- type pyridoxine vitamin B6 biosynthetic protein SNO1
YALI1_E24479g	Compare to YALI0E20625g, some similarities with uniprot|P18562 Saccharomyces cerevisiae YHR128w FUR1 uracil phosphoribosyltransferase, similar to Saccharomyces cerevisiae FUR1 (YHR128W); ancestral locus Anc_2.118
YALI1_E24487g	Compare to YALI0E20647g, similar to uniprot|Q9C2K0 Neurospora crassa
YALI1_E24513g	Compare to YALI0E20669g, similar to Saccharomyces cerevisiae YGR283C and YMR310C; ancestral locus Anc_5.7, similar to KLLA0F03058g Kluyveromyces lactis
YALI1_E24532g	Compare to YALI0E20691g, similar to uniprot|P54838 Saccharomyces cerevisiae YML070w dihydroxyacetone kinase
YALI1_E24567g	Compare to YALI0E20713g, similar to uniprot|P43548 Saccharomyces cerevisiae YFL055w AGP3 amino acid permease
YALI1_E24618g	Compare to YALI0E20735g, similar to CA1197|CaIFG1 Candida albicans
YALI1_E24633g	Truncated form of YALI0E20757g, similar to Saccharomyces cerevisiae CCW14 (YLR390W-A); ancestral locus Anc_4.251, some similarities with uniprot|O13547 Saccharomyces cerevisiae YLR390w-a SSR1 Secretory Stress Response protein 1
YALI1_E24676g	Compare to YALI0E20779g, no similarity
YALI1_E24719g	Compare to YALI0E20801g, similar to uniprot|Q6C426 Yarrowia lipolytica YALI0E30327g
YALI1_E24735g	Compare to YALI0E20823g, weakly similar to uniprot|Q12303 Saccharomyces cerevisiae YLR121c YPS3 GPI-anchored aspartyl protease 3 (yapsin 3)
YALI1_E24762g	Compare to YALI0E20845g, weakly similar to CA5393|IPF9398 Candida albicans
YALI1_E24793g	Compare to YALI0E20867g, similar to uniprot|O59906 Candida albicans CKB1 Casein kinase II beta chain (CK II), similar to Saccharomyces cerevisiae CKB1 (YGL019W); ancestral locus Anc_4.102
YALI1_E24797g	Compare to YALI0E20889g, similar to Saccharomyces cerevisiae GET1 (YGL020C); ancestral locus Anc_4.101, similar to uniprot|Q7S0A1 Neurospora crassa NCU10034.1 predicted protein
YALI1_E24824g	Compare to YALI0E20911g, some similarities with wi|NCU00270.1 Neurospora crassa NCU00270.1 predicted protein
YALI1_E24886g	Compare to YALI0E20933g, similar to Saccharomyces cerevisiae HIR1 (YBL008W); ancestral locus Anc_4.106, weakly similar to uniprot|P32479 Saccharomyces cerevisiae YBL008w HIR1 histone transcription regulator
YALI1_E24894g	Compare to YALI0E20955g, similar to uniprot|Q8TG11 Neurospora crassa CKB2 Casein kinase II beta subunit
YALI1_E24922g	Compare to YALI0E20977g, similar to uniprot|P53090 Saccharomyces cerevisiae YGL202w ARO8 aromatic amino acid aminotransferase I
YALI1_E24956g	Compare to YALI0E20999g, weakly similar to uniprot|Q9P4F1 Aspergillus parasiticus Monooxigenase
YALI1_E25018g	Truncated form of YALI0E21021g, uniprot|Q9UVK9 Yarrowia lipolytica 1 3-beta-glucan synthase activity
YALI1_E25063g	Compare to YALI0E21043g, similar to uniprot|Q08967 Saccharomyces cerevisiae YPL221W bop1
YALI1_E25107g	Compare to YALI0E21065g, similar to DEHA0D05984g Debaryomyces hansenii
YALI1_E25132g	Compare to YALI0E21087g, some similarities with uniprot|P87049 Schizosaccharomyces pombe G1/S-specific cyclin pas1, similar to Saccharomyces cerevisiae PCL5 (YHR071W); ancestral locus Anc_5.347
YALI1_E25163g	Truncated form of YALI0E21109g, similar to uniprot|P53334 Saccharomyces cerevisiae YGR279C Probable family 17 glucosidase SCW4 precursor (Soluble cell wall protein 4)
YALI1_E25189g	Compare to YALI0E21131g, similar to uniprot|Q8NKG8 Kluyveromyces lactis Putative delta 8-sphingolipid desaturase
YALI1_E25211g	Compare to YALI0E21153g, similar to uniprot|Q02724 Saccharomyces cerevisiae YPL020c ULP1 Ubl-specific protease, similar to Saccharomyces cerevisiae ULP1 (YPL020C); ancestral locus Anc_8.72
YALI1_E25267g	Compare to YALI0E21175g, weakly similar to uniprot|P32843 Saccharomyces cerevisiae YMR302c PRP12 involved in early maturation of pre-rRNA, similar to Saccharomyces cerevisiae YME2 (YMR302C); ancestral locus Anc_5.19
YALI1_E25290g	Compare to YALI0E21197g, weakly similar to DEHA0D16533g Debaryomyces hansenii, similar to Saccharomyces cerevisiae LCB3 (YJL134W) and YSR3 (YKR053C); ancestral locus Anc_1.217
YALI1_E25317g	Compare to YALI0E21219g, similar to uniprot|P53221 Saccharomyces cerevisiae YGR034W 60S ribosomal protein L26-B (YL33), similar to Saccharomyces cerevisiae RPL26B (YGR034W) and RPL26A (YLR344W); ancestral locus Anc_4.176
YALI1_E25364g	Compare to YALI0E21241g, weakly similar to uniprot|Q07824 Saccharomyces cerevisiae YLL028w TPO1 polyamine transport protein
YALI1_E25400g	Truncated form of YALI0E21307g, similar to Saccharomyces cerevisiae CYB2 (YML054C); ancestral locus Anc_4.304, similar to uniprot|P00175 Saccharomyces cerevisiae YML054c CYB2 lactate dehydrogenase cytochrome b2
YALI1_E25424g	Compare to YALI0E21329g, similar to uniprot|P36015 Saccharomyces cerevisiae YKL196c YKT6 SNARE protein for Endoplasmic Reticulum-Golgi transport, similar to Saccharomyces cerevisiae YKT6 (YKL196C); ancestral locus Anc_4.303
YALI1_E25443g	Compare to YALI0E21351g, similar to Saccharomyces cerevisiae THI80 (YOR143C); ancestral locus Anc_5.479, weakly similar to uniprot|P35202 Saccharomyces cerevisiae YOR143c THI80 thiamin pyrophosphokinase
YALI1_E25453g	Compare to YALI0E21373g, similar to Saccharomyces cerevisiae MIA40 (YKL195W); ancestral locus Anc_4.302, some similarities with uniprot|P36046 Saccharomyces cerevisiae YKL195w
YALI1_E25485g	Compare to YALI0E21395g, similar to Saccharomyces cerevisiae SPP382 (YLR424W); ancestral locus Anc_4.301, weakly similar to uniprot|Q9UTK6 Schizosaccharomyces pombe
YALI1_E25490g	Compare to YALI0E21417g, similar to Saccharomyces cerevisiae SPT3 (YDR392W); ancestral locus Anc_5.480, similar to uniprot|P06844 Saccharomyces cerevisiae YDR392w SPT3 general transcriptional adaptor or co- activator
YALI1_E25518g	Compare to YALI0E21439g, similar to Saccharomyces cerevisiae RAD28 (YDR030C); ancestral locus Anc_3.259, weakly similar to uniprot|Q12021 Saccharomyces cerevisiae YDR030c RAD28 protein involved in the same pathway as RAD26P has beta-transducin (WD-40) repeats
YALI1_E25537g	Truncated form of YALI0E21472g, gnl|GLV|YALI0E21472g [Yarrowia lipolytica] similar to uniprot|Q7S6R7 Neurospora crassa Hypothetical protein
YALI1_E25541g	Compare to YALI0E21505g, weakly similar to uniprot|P47118 Saccharomyces cerevisiae YJR067c YAE1, similar to Saccharomyces cerevisiae YAE1 (YJR067C); ancestral locus Anc_1.516
YALI1_E25549g	Compare to YALI0E21527g, no similarity
YALI1_E25585g	Compare to YALI0E21549g, some similarities with uniprot|Q9FKL5 Arabidopsis thaliana Adenosylmethionine-8-amino-7-oxononanoate aminotransferase-like protein
YALI1_E25587g	Compare to YALI0E21560g, weakly similar to uniprot|P25608 Saccharomyces cerevisiae YCR102c similarity to C.carbonum toxD gene
YALI1_E25617g	Compare to YALI0E21582g, no similarity
YALI1_E25640g	Compare to YALI0E21604g, similar to uniprot|Q10449 Schizosaccharomyces pombe
YALI1_E25671g	Compare to YALI0E21626g, similar to uniprot|P47122 Saccharomyces cerevisiae YJR072c, similar to Saccharomyces cerevisiae NPA3 (YJR072C); ancestral locus Anc_1.523
YALI1_E25675g	Compare to YALI0E21648g, similar to DEHA0F25102g Debaryomyces hansenii, similar to Saccharomyces cerevisiae ADD66 (YKL206C); ancestral locus Anc_1.522
YALI1_E25692g	Compare to YALI0E21670g, similar to uniprot|Q9P787 Schizosaccharomyces pombe, similar to Saccharomyces cerevisiae YKL207W; ancestral locus Anc_1.524
YALI1_E25713g	Compare to YALI0E21692g, highly similar to uniprot|P40413 Saccharomyces cerevisiae YJR064w CCT5 T-complex protein 1 epsilon subunit
YALI1_E25729g	Compare to YALI0E21758g, weakly similar to uniprot|Q8X0C0 Neurospora crassa NCU06821.1 probable cro1 protein, similar to Saccharomyces cerevisiae SHE4 (YOR035C); ancestral locus Anc_5.627
YALI1_E25761g	Compare to YALI0E21780g, similar to uniprot|P39010 Saccharomyces cerevisiae YDR264c AKR1 ankyrin repeat-containing protein, similar to Saccharomyces cerevisiae AKR1 (YDR264C) and AKR2 (YOR034C); ancestral locus Anc_5.626
YALI1_E25812g	Compare to YALI0E21802g, weakly similar to uniprot|Q9USK2 Schizosaccharomyces pombe Hypothetical 51.0 kDa protein
YALI1_E25826g	Compare to YALI0E21824g, weakly similar to uniprot|P32609 Saccharomyces cerevisiae YDR323c PEP7 vacuolar segregation protein, similar to Saccharomyces cerevisiae PEP7 (YDR323C); ancestral locus Anc_5.364
YALI1_E25859g	Compare to YALI0E21846g, similar to Saccharomyces cerevisiae GCD1 (YOR260W); ancestral locus Anc_8.709, similar to uniprot|P09032 Saccharomyces cerevisiae YOR260w GCD1 translation initiation factor eIF2bgamma subunit
YALI1_E25866g	Compare to YALI0E21868g, similar to Saccharomyces cerevisiae RPT4 (YOR259C); ancestral locus Anc_8.708, highly similar to uniprot|P53549 Saccharomyces cerevisiae YOR259c CRL13 26S proteasome regulatory subunit
YALI1_E25889g	Compare to YALI0E21890g, similar to uniprot|Q08702 Saccharomyces cerevisiae YOR258w, similar to Saccharomyces cerevisiae HNT3 (YOR258W); ancestral locus Anc_8.707
YALI1_E25905g	Compare to YALI0E21912g, uniprot|P78979 Yarrowia lipolytica protein- translocation complex alpha subunit, similar to Saccharomyces cerevisiae SEC61 (YLR378C); ancestral locus Anc_4.230
YALI1_E25932g	Compare to YALI0E21934g, weakly similar to uniprot|P23797 Saccharomyces cerevisiae YMR281w GPI12 N-acetylglucosaminyl phosphatidylinositol deacetylase, similar to Saccharomyces cerevisiae GPI12 (YMR281W); ancestral locus Anc_8.846
YALI1_E25955g	Compare to YALI0E21956g, no similarity
YALI1_E25964g	Compare to YALI0E21978g, similar to Saccharomyces cerevisiae DPB11 (YJL090C); ancestral locus Anc_1.276, weakly similar to uniprot|P47027 Saccharomyces cerevisiae YJL090c DPB11 involved in DNA replication and S- phase checkpoint
YALI1_E25995g	Compare to YALI0E22000g, similar to Saccharomyces cerevisiae RIT1 (YMR283C); ancestral locus Anc_8.848, similar to uniprot|P23796 Saccharomyces cerevisiae YMR283c RIT1 initiator tRNA phosphoribosyl-transferase
YALI1_E25999g	Compare to YALI0E22022g, similar to Saccharomyces cerevisiae PAF1 (YBR279W); ancestral locus Anc_1.309, similar to uniprot|P38351 Saccharomyces cerevisiae YBR279w PAF1 DNA-directed RNA polymerase II regulator
YALI1_E26021g	Compare to YALI0E22044g, similar to Saccharomyces cerevisiae SEC1 (YDR164C); ancestral locus Anc_8.351, similar to uniprot|P30619 Saccharomyces cerevisiae YDR164c SEC1 protein transport protein
YALI1_E26076g	Compare to YALI0E22066g, no similarity
YALI1_E26094g	Truncated form of YALI0E22088g, weakly similar to uniprot|P10863 Saccharomyces cerevisiae YER011w TIR1 cold-shock induced protein of the TIR1P TIP1P family
YALI1_E26118g	Compare to YALI0E22132g, no similarity possibly noncoding
YALI1_E26181g	Compare to YALI0E22198g, similar to uniprot|Q8TF96 Aspergillus oryzae Chitin synthase
YALI1_E26205g	Compare to YALI0E22220g, similar to uniprot|P54837 Saccharomyces cerevisiae YML012w ERV25 component of the COPII-coated vesicles 25 Kda
YALI1_E26223g	Compare to YALI0E22242g, no similarity
YALI1_E26229g	Compare to YALI0E22264g, weakly similar to wi|NCU07888.1 Neurospora crassa NCU07888.1 predicted protein
YALI1_E26257g	Compare to YALI0E22286g, highly similar to uniprot|P78977 Yarrowia lipolytica Cell wall protein precursor YlCWP1 (strain cx39- 74a)
YALI1_E26320g	Compare to YALI0E22330g, no similarity
YALI1_E26336g	Compare to YALI0E22352g, highly similar to uniprot|P26321 Saccharomyces cerevisiae YPL131w RPL1 60S large subunit ribosomal protein L5.e, similar to Saccharomyces cerevisiae RPL5 (YPL131W); ancestral locus Anc_8.639
YALI1_E26377g	Compare to YALI0E22374g, weakly similar to uniprot|Q12303 Saccharomyces cerevisiae YLR121c YPS3 GPI-anchored aspartyl protease 3 (yapsin 3)
YALI1_E26433g	Compare to YALI0E22396g, highly similar to uniprot|Q6C166 Yarrowia lipolytica YALI0F18832g
YALI1_E26472g	Compare to YALI0E22418g, no similarity
YALI1_E26492g	Compare to YALI0E22440g, no similarity possibly noncoding
YALI1_E26513g	Compare to YALI0E22462g, similar to uniprot|Q08108 Saccharomyces cerevisiae YOL011w PLB3 phospholipase B (lysophospholipase)
YALI1_E26525g	Compare to YALI0E22484g, similar to uniprot|Q09686 Schizosaccharomyces pombe
YALI1_E26551g	Compare to YALI0E22506g, similar to CA2778|CaMTR Candida albicans CaMTR neutral amino acid permease-like by homology
YALI1_E26592g	Compare to YALI0E22550g, weakly similar to uniprot|P08640 Saccharomyces cerevisiae YIR019c STA1 extracellular alpha-1 4-glucan glucosidase
YALI1_E26677g	Compare to YALI0E22572g, weakly similar to uniprot|P08640 Saccharomyces cerevisiae YIR019c STA1 extracellular alpha-1 4-glucan glucosidase
YALI1_E26742g	Compare to YALI0E22605g, weakly similar to uniprot|Q96UP3 Schizosacharomyces pombe Telomere length regulator protein rif1, similar to Saccharomyces cerevisiae RIF1 (YBR275C); ancestral locus Anc_1.337
YALI1_E26788g	Compare to YALI0E22627g, similar to uniprot|P32460 Saccharomyces cerevisiae YIR030c DCG1 involved in nitrogen-catabolite metabolism, similar to Saccharomyces cerevisiae DCG1 (YIR030C)
YALI1_E26811g	Compare to YALI0E22649g, similar to uniprot|P11412 Saccharomyces cerevisiae YNL241c ZWF1 glucose-6-phosphate dehydrogenase, similar to Saccharomyces cerevisiae ZWF1 (YNL241C); ancestral locus Anc_2.3
YALI1_E26860g	Compare to YALI0E22671g, no similarity, similar to Saccharomyces cerevisiae YEN1 (YER041W); ancestral locus Anc_3.540
YALI1_E26872g	Compare to YALI0E22715g, weakly similar to uniprot|Q04089 Saccharomyces cerevisiae YDR440w DOT1 putative ATPase, similar to Saccharomyces cerevisiae DOT1 (YDR440W); ancestral locus Anc_5.556
YALI1_E26892g	Compare to YALI0E22737g, weakly similar to uniprot|Q03818 Saccharomyces cerevisiae YMR159c APG16 protein required for autophagy singleton
YALI1_E26900g	Compare to YALI0E22759g, similar to uniprot|P41767 Kluyveromyces lactis MRF- 1 Peptide chain release factor 1 mitochondrial precursor, similar to Saccharomyces cerevisiae MRF1 (YGL143C); ancestral locus Anc_2.331
YALI1_E26930g	Compare to YALI0E22781g, similar to Saccharomyces cerevisiae OSH3 (YHR073W); ancestral locus Anc_5.355, weakly similar to uniprot|P38713 Saccharomyces cerevisiae YHR073w OSH3 OxySterol binding protein Homolog
YALI1_E26971g	Compare to YALI0E22803g, similar to uniprot|Q03730 Saccharomyces cerevisiae YML018c Putative protein of unknown function
YALI1_E26987g	Compare to YALI0E22825g, some similarities with uniprot|Q09825 Schizosaccharomyces pombe Spindle pole body associated protein sad1
YALI1_E27041g	Compare to YALI0E22847g, some similarities with uniprot|P40494 Saccharomyces cerevisiae YIL095w PRK1 serine/threonine protein kinase involved in regulation of actin cytoskeleton organization P108.1.f4.1
YALI1_E27059g	Compare to YALI0E22880g, weakly similar to uniprot|P50946 Saccharomyces cerevisiae YNL099c
YALI1_E27076g	Compare to YALI0E22902g, similar to Saccharomyces cerevisiae TRS33 (YOR115C); ancestral locus Anc_2.160, some similarities with uniprot|Q99394 Saccharomyces cerevisiae YOR115c Trs33p TRAPP subunit of 33 kDa involved in targeting and fusion of ER to golgi transport vesicles
YALI1_E27077g	Compare to YALI0E22913g, similar to Saccharomyces cerevisiae STE14 (YDR410C); ancestral locus Anc_5.510, weakly similar to uniprot|P32584 Saccharomyces cerevisiae YDR410c STE14 farnesyl cysteine carboxyl- methyltransferase
YALI1_E27104g	Compare to YALI0E22935g, highly similar to uniprot|P32561 Saccharomyces cerevisiae YNL330c RPD3 histone deacetylase B
YALI1_E27113g	Compare to YALI0E22957g, similar to Saccharomyces cerevisiae HUT1 (YPL244C); ancestral locus Anc_6.272, similar to DEHA0F02662g Debaryomyces hansenii possible UDP-galactose transporter HUT1
YALI1_E27144g	Compare to YALI0E22979g, similar to Saccharomyces cerevisiae FRS1 (YLR060W); ancestral locus Anc_8.33, similar to uniprot|O13432 Candida albicans FRS1 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)
YALI1_E27161g	Compare to YALI0E23001g, uniprot|Q9HGU7 Yarrowia lipolytica GTP-binding protein, similar to Saccharomyces cerevisiae YPT1 (YFL038C); ancestral locus Anc_8.25
YALI1_E27182g	Compare to YALI0E23023g, some similarities with DEHA0E04642g Debaryomyces hansenii
YALI1_E27196g	Compare to YALI0E23045g, similar to Saccharomyces cerevisiae SCO2 (YBR024W) and SCO1 (YBR037C); ancestral locus Anc_3.225, similar to uniprot|P23833 Saccharomyces cerevisiae YBR037c SCO1 involved in stabilization of COX1P and COX2P
YALI1_E27207g	Compare to YALI0E23067g, uniprot|P41924 Yarrowia lipolytica Ras-like GTP- binding protein
YALI1_E27218g	Compare to YALI0E23089g, similar to uniprot|O94061 Candida albicans CA49C4. 02 accessory subunit of NADH-ubiquinone oxidoreductase
YALI1_E27229g	Compare to YALI0E23111g, no similarity
YALI1_E27243g	Compare to YALI0E23133g, similar to uniprot|Q05027 Saccharomyces cerevisiae YMR236w TAF17 TFIID and SAGA subunit, similar to Saccharomyces cerevisiae TAF9 (YMR236W); ancestral locus Anc_8.771
YALI1_E27249g	Compare to YALI0E23155g, weakly similar to uniprot|P35176 Saccharomyces cerevisiae YDR304c CYP5 peptidyl-prolyl cis-trans isomerase D precursor(cyclophilin D) of the ER
YALI1_E27273g	Compare to YALI0E23177g, weakly similar to uniprot|P42836 Saccharomyces cerevisiae YNL326c PFA3 and weakly similar to uniprot|Q06551 Saccharomyces cerevisiae YLR246W ERF2 Palmitoyltransferase
YALI1_E27279g	Compare to YALI0E23185g, gnl|GLV|YALI0E23185g [Yarrowia lipolytica] highly similar to uniprot|P31787 Saccharomyces cerevisiae YGR037C ACBP Acyl-CoA-binding protein (ACBP), similar to Saccharomyces cerevisiae ACB1 (YGR037C); ancestral locus Anc_4.181
YALI1_E27313g	Compare to YALI0E23192g, gnl|GLV|YALI0E23192g [Yarrowia lipolytica] some similarities with uniprot|A2R678 Aspergillus niger
YALI1_E27339g	Compare to YALI0E23199g, weakly similar to DEHA-IPF12148.1 Debaryomyces hansenii
YALI1_E27367g	Compare to YALI0E23221g, no similarity
YALI1_E27383g	Compare to YALI0E23243g, similar to uniprot|P32867 Saccharomyces cerevisiae YPL232w SSO1 syntaxin-related protein
YALI1_E27406g	Compare to YALI0E23265g, similar to uniprot|P40066 Saccharomyces cerevisiae YER107c GLE2 required for nuclear pore complex structure and function
YALI1_E27441g	Compare to YALI0E23287g, similar to uniprot|P49374 Kluyveromyces lactis High- affinity glucose transporter
YALI1_E27469g	Compare to YALI0E23320g, no similarity possibly noncoding
YALI1_E27504g	Compare to YALI0E23342g, weakly similar to uniprot|Q04195 Saccharomyces cerevisiae YDR409W D9509.27P (Farnesyl cysteine carboxyl- methyltransferase) (STE14), similar to Saccharomyces cerevisiae SIZ1 (YDR409W) and NFI1 (YOR156C); ancestral locus Anc_5.509
YALI1_E27532g	Compare to YALI0E23364g, similar to uniprot|Q8NIW6 Neurospora crassa
YALI1_E27548g	Compare to YALI0E23386g, highly similar to uniprot|Q05498 Sacharomyces cerevisiae, similar to Saccharomyces cerevisiae FCF1 (YDR339C); ancestral locus Anc_5.392
YALI1_E27556g	Compare to YALI0E23408g, similar to Saccharomyces cerevisiae PEP5 (YMR231W); ancestral locus Anc_8.761, similar to uniprot|P12868 Saccharomyces cerevisiae YMR231w PEP5 vacuolar biogenesis protein
YALI1_E27600g	Compare to YALI0E23430g, similar to uniprot|Q10138 Schizosaccharomyces pombe
YALI1_E27625g	Compare to YALI0E23452g, similar to DEHA0E25410g Debaryomyces hansenii
YALI1_E27649g	Compare to YALI0E23474g, uniprot|O74129 Yarrowia lipolytica alkane utilisation CYP52 family member
YALI1_E27697g	Truncated form of YALI0E23496g, similar to uniprot|P16892 Saccharomyces cerevisiae YBL016w FUS3 mitogen-activated protein kinase (MAP kinase)
YALI1_E27731g	Compare to YALI0E23518g, weakly similar to DEHA0B03542g Debaryomyces hansenii IPF9431.1
YALI1_E27791g	Compare to YALI0E23540g, weakly similar to uniprot|P22217 Saccharomyces cerevisiae YLR043c TRX1 thioredoxin I
YALI1_E27871g	Compare to YALI0E23562g, similar to uniprot|P38664 Kluyveromyces lactis RL30_KLULA 60S ribosomal protein L30 (L32), similar to Saccharomyces cerevisiae RPL30 (YGL030W); ancestral locus Anc_4.85
YALI1_E27880g	Compare to YALI0E23584g, similar to Saccharomyces cerevisiae RPL24A (YGL031C) and RPL24B (YGR148C); ancestral locus Anc_4.84, highly similar to uniprot|P38665 Kluyveromyces lactis RL24_KLULA 60S ribosomal protein L24 (L30)
YALI1_E27927g	Compare to YALI0E23606g, no similarity
YALI1_E27939g	Compare to YALI0E23628g, some similarities with uniprot|O13845 Schizosaccharomyces pombe Putative splicing factor
YALI1_E27997g	Compare to YALI0E23650g, no similarity
YALI1_E28033g	Compare to YALI0E23694g, some similarities with uniprot|P05750 Saccharomyces cerevisiae YNL178w RPS3 ribosomal protein S3, similar to Saccharomyces cerevisiae RPS3 (YNL178W); ancestral locus Anc_2.76
YALI1_E28046g	Compare to YALI0E23716g, similar to uniprot|Q02774 Saccharomyces cerevisiae YDL212w SHR3 endoplasmatic reticulum membrane protein, similar to Saccharomyces cerevisiae SHR3 (YDL212W); ancestral locus Anc_2.77
YALI1_E28097g	Compare to YALI0E23738g, some similarities with uniprot|P47147 Saccharomyces cerevisiae YJR110w, similar to Saccharomyces cerevisiae YMR1 (YJR110W); ancestral locus Anc_7.491
YALI1_E28107g	Compare to YALI0E23749g, gnl|GLV|YALI0E23749g [Yarrowia lipolytica] NADH-ubiquinone reductase accessory subunit 9 kDa (complex I)
YALI1_E28130g	Compare to YALI0E23760g, similar to Saccharomyces cerevisiae MRPL22 (YNL177C); ancestral locus Anc_2.78, similar to CAGL0J11198g Candida glabrata
YALI1_E28150g	Compare to YALI0E23782g, similar to Saccharomyces cerevisiae YCL002C; ancestral locus Anc_1.416, no similarity
YALI1_E28156g	Compare to YALI0E23793g, gnl|GLV|YALI0E23793g [Yarrowia lipolytica] similar to uniprot|P36404 Homo sapiens ARL2 ADP- ribosylation factor-like protein 2
YALI1_E28170g	Compare to YALI0E23804g, similar to Saccharomyces cerevisiae SPT8 (YLR055C); ancestral locus Anc_8.43, similar to uniprot|P38915 Saccharomyces cerevisiae YLR055c SPT8 transcriptional adaptor or co-activator
YALI1_E28213g	Compare to YALI0E23826g, no similarity
YALI1_E28300g	Compare to YALI0E23859g, similar to uniprot|P38361 Saccharomyces cerevisiae YBR296c PHO89 Na+-coupled phosphate transport protein high affinity
YALI1_E28428g	Compare to YALI0E23925g, weakly similar to DEHA0F18623g Debaryomyces hansenii
YALI1_E28465g	Compare to YALI0E23947g, similar to uniprot|P07703 Saccharomyces cerevisiae YPR110c RPC40 DNA-directed RNA polymerase I and III 40 kDa polypeptide, similar to Saccharomyces cerevisiae RPC40 (YPR110C); ancestral locus Anc_3.428
YALI1_E28490g	Compare to YALI0E23969g, no similarity
YALI1_E28545g	Compare to YALI0E23991g, similar to Saccharomyces cerevisiae POS5 (YPL188W); ancestral locus Anc_6.186, similar to uniprot|Q9C2P6 Neurospora crassa Related to UTR1 (Associated with ferric reductase activity)
YALI1_E28575g	Compare to YALI0E24013g, similar to uniprot|P53598 Saccharomyces cerevisiae YOR142w LSC1 succinate-CoA ligase alpha subunit, similar to Saccharomyces cerevisiae LSC1 (YOR142W); ancestral locus Anc_5.478
YALI1_E28599g	Compare to YALI0E24035g, similar to uniprot|P29056 Saccharomyces cerevisiae YGR246c BRF1 TFIIIB subunit 70 kD, similar to Saccharomyces cerevisiae BRF1 (YGR246C); ancestral locus Anc_5.80
YALI1_E28631g	Compare to YALI0E24057g, similar to Saccharomyces cerevisiae GLO1 (YML004C); ancestral locus Anc_6.305, similar to uniprot|P50107 Saccharomyces cerevisiae YML004c GLO1 glyoxalase I
YALI1_E28648g	Compare to YALI0E24079g, similar to Saccharomyces cerevisiae DAP1 (YPL170W); ancestral locus Anc_8.701, similar to uniprot|Q8NIX4 Neurospora crassa
YALI1_E28680g	Compare to YALI0E24101g, no similarity
YALI1_E28736g	Compare to YALI0E24123g, similar to uniprot|Q00974 Kluyveromyces lactis MNN2 KLLA0B03157g UDP-N-acetylglucosamine transporter (Golgi UDP-GlcNAc transporter)
YALI1_E28755g	Compare to YALI0E24145g, similar to Saccharomyces cerevisiae YMR010W; ancestral locus Anc_7.112, similar to uniprot|Q03687 Saccharomyces cerevisiae YMR010w
YALI1_E28779g	Compare to YALI0E24167g, weakly similar to uniprot|Q2VQ77 Saccharomyces cerevisiae YPL092w SSU1 Plasma membrane sulfite pump involved in sulfite metabolism and required for efficient sulfite efflux
YALI1_E28808g	Compare to YALI0E24189g, no similarity
YALI1_E28828g	Compare to YALI0E24211g, similar to CAGL0J08613g Candida glabrata related to calcium influx channel, similar to Saccharomyces cerevisiae YVC1 (YOR087W); ancestral locus Anc_2.198
YALI1_E28903g	Truncated form of YALI0E24277g, weakly similar to uniprot|Q8WZK9 Neurospora crassa
YALI1_E28919g	Truncated form of YALI0E24277g, weakly similar to uniprot|Q8WZK9 Neurospora crassa
YALI1_E28957g	Compare to YALI0E24299g, weakly similar to uniprot|P53108 Saccharomyces cerevisiae YGL161c, similar to Saccharomyces cerevisiae YIP5 (YGL161C); ancestral locus Anc_8.110
YALI1_E28964g	Compare to YALI0E24321g, similar to uniprot|Q12133 Saccharomyces cerevisiae YLR066w SPC3 signal peptidase subunit, similar to Saccharomyces cerevisiae SPC3 (YLR066W); ancestral locus Anc_8.21
YALI1_E28999g	Compare to YALI0E24343g, no similarity
YALI1_E29005g	Compare to YALI0E24365g, similar to Saccharomyces cerevisiae FYV7 (YLR068W); ancestral locus Anc_8.19, weakly similar to DEHA0E13926g Debaryomyces hansenii
YALI1_E29046g	Truncated form of YALI0E24387g, weakly similar to DEHA-IPF11745.1 Debaryomyces hansenii DEHA0E14960g
YALI1_E29074g	Compare to YALI0E24409g, similar to sgd|S0028514 uniprot|Q3E7A9 Saccharomyces cerevisiae YMR194C-B uncharacterized protein, similar to Saccharomyces cerevisiae YMR194C-B; ancestral locus Anc_6.284
YALI1_E29085g	Compare to YALI0E24431g, weakly similar to uniprot|P38086 Saccharomyces cerevisiae YBR073w RDH54 required for mitotic diploid- specific recombination and repair and meiosis
YALI1_E29137g	Compare to YALI0E24453g, similar to Saccharomyces cerevisiae ATG3 (YNR007C); ancestral locus Anc_6.297, some similarities with uniprot|P40344 Saccharomyces cerevisiae YNR007c AUT1 essential for autophagocytosis
YALI1_E29150g	Compare to YALI0E24475g, similar to Saccharomyces cerevisiae RPL31A (YDL075W) and RPL31B (YLR406C); ancestral locus Anc_4.270, highly similar to uniprot|P04649 Saccharomyces cerevisiae YLR406c 60S large subunit ribosomal protein L31B (L34B) (YL28)
YALI1_E29179g	Compare to YALI0E24497g, similar to Saccharomyces cerevisiae MET7 (YOR241W); ancestral locus Anc_8.669, similar to uniprot|Q08645 Saccharomyces cerevisiae YOR241w MET7 tetrahydrofolylpolyglutamate synthase
YALI1_E29192g	Compare to YALI0E24519g, similar to Saccharomyces cerevisiae ATG5 (YPL149W); ancestral locus Anc_8.666, similar to uniprot|O74971 Schizosaccharomyces pombe Apoptosis specific protein homolog APG5/YPL149w homologue involved in autophagy and nutrient starvation
YALI1_E29221g	Compare to YALI0E24541g, weakly similar to uniprot|Q8RXK5 Arabidopsis thaliana Hypothetical 73.4 kDa protein,ancestral locus Anc_8.667
YALI1_E29235g	Compare to YALI0E24563g, similar to Saccharomyces cerevisiae RAD53 (YPL153C); ancestral locus Anc_8.676, similar to uniprot|Q12152 Saccharomyces cerevisiae YPL150w
YALI1_E29263g	Compare to YALI0E24585g, weakly similar to uniprot|Q6CFJ3 Yarrowia lipolytica YALI0B06490g
YALI1_E29319g	Compare to YALI0E24607g, similar to Saccharomyces cerevisiae CDC60 (YPL160W); ancestral locus Anc_8.683, similar to uniprot|P26637 Saccharomyces cerevisiae YPL160w CDC60 leucine--tRNA ligase cytosolic
YALI1_E29330g	Compare to YALI0E24629g, weakly similar to uniprot|P38798 Saccharomyces cerevisiae YHR077c NMD2 Nonsense-mediated mRNA decay protein 2 (Up-frameshift suppressor 2), similar to Saccharomyces cerevisiae NMD2 (YHR077C); ancestral locus Anc_5.363
YALI1_E29433g	Compare to YALI0E24651g, similar to Saccharomyces cerevisiae PRM10 (YJL108C); ancestral locus Anc_1.254, some similarities with DEHA0C03817g Debaryomyces hansenii
YALI1_E29481g	Compare to YALI0E24673g, weakly similar to uniprot|P53301 Saccharomyces cerevisiae YGR189c CRH1
YALI1_E29512g	Compare to YALI0E24695g, similar to DEHA0F09559g Debaryomyces hansenii
YALI1_E29535g	Compare to YALI0E24717g, similar to Saccharomyces cerevisiae ABP140 (YOR239W); ancestral locus Anc_8.665, similar to uniprot|Q08641 Saccharomyces cerevisiae YOR239W ABP140 Nonessential protein that binds actin filaments and localizes to actin patches and cables, has similarity to S-adenosylmethionine (AdoMet)-dependent methyltransferases
YALI1_E29557g	Compare to YALI0E24739g, no similarity
YALI1_E29586g	Compare to YALI0E24761g, similar to uniprot|P53738 Saccharomyces cerevisiae YNR046w strong similarity to S.pombe hypothetical protein SPAC31A2.02, similar to Saccharomyces cerevisiae TRM112 (YNR046W); ancestral locus Anc_6.370
YALI1_E29611g	Compare to YALI0E24783g, similar to wi|NCU08505.1 Neurospora crassa conserved protein of unknown function, similar to Saccharomyces cerevisiae YCR090C; ancestral locus Anc_6.368
YALI1_E29617g	Compare to YALI0E24805g, similar to Saccharomyces cerevisiae MRPL17 (YNL252C); ancestral locus Anc_1.108, similar to uniprot|P36528 Saccharomyces cerevisiae YNL252c MRPL17 ribosomal protein of the large subunit (YmL30) mitochondrial
YALI1_E29642g	Compare to YALI0E24827g, similar to Saccharomyces cerevisiae TEX1 (YNL253W); ancestral locus Anc_1.107, weakly similar to DEHA0E12430g Debaryomyces hansenii
YALI1_E29665g	Compare to YALI0E24849g, weakly similar to uniprot|P53617 Saccharomyces cerevisiae YNL251c NRD1 involved in regulation of nuclear pre-mRNA abundance, similar to Saccharomyces cerevisiae NRD1 (YNL251C); ancestral locus Anc_1.109
YALI1_E29709g	Compare to YALI0E24893g, similar to uniprot|P53973 Saccharomyces cerevisiae YNL021w HDA1 histone deacetylase A, similar to Saccharomyces cerevisiae HDA1 (YNL021W); ancestral locus Anc_2.285
YALI1_E29719g	Compare to YALI0E24915g, weakly similar to DEHA0B05830g Debaryomyces hansenii, similar to Saccharomyces cerevisiae YBL086C; ancestral locus Anc_7.414
YALI1_E29776g	Compare to YALI0E24937g, some similarities with uniprot|P38704 Saccharomyces cerevisiae YHR006w SPT2 involved in pre-tRNA splicing, similar to Saccharomyces cerevisiae STP1 (YDR463W) and STP2 (YHR006W); ancestral locus Anc_5.586
YALI1_E29827g	Compare to YALI0E24959g, similar to Saccharomyces cerevisiae YMD8 (YML038C); ancestral locus Anc_5.585, weakly similar to uniprot|Q03697 Saccharomyces cerevisiae YML038c YMD8 similarity to vanadate resistance protein GOG5P member of the triose phosphate translocater family of membrane transporters
YALI1_E29840g	Compare to YALI0E24981g, weakly similar to CAGL0A02431g Candida glabrata
YALI1_E29894g	Compare to YALI0E25003g, no similarity possibly noncoding
YALI1_E29930g	Truncated form of YALI0E25025g, similar to uniprot|P05735 Saccharomyces cerevisiae YBR084C-A RPL19A and similar to uniprot|P05735 Saccharomyces cerevisiae YBL027W RPL19B Ribosomal Protein of the Large subunit
YALI1_E29959g	Compare to YALI0E25047g, no similarity
YALI1_E30014g	Compare to YALI0E25069g, similar to uniprot|P39109 Saccharomyces cerevisiae YDR135c YCF1 Metal resistance protein
YALI1_E30028g	Compare to YALI0E25091g, weakly similar to uniprot|P38013 Saccharomyces cerevisiae YLR109w AHP1 Alkyl hydroperoxide reductase
YALI1_E30053g	Compare to YALI0E25113g, no similarity
YALI1_E30073g	Compare to YALI0E25135g, highly similar to uniprot|P32485 Saccharomyces cerevisiae YLR113w HOG1 ser/thr protein kinase of MAP kinase (MAPK) family
YALI1_E30109g	Compare to YALI0E25179g, weakly similar to uniprot|O74852 Schizosaccharomyces pombe
YALI1_E30173g	Compare to YALI0E25201g, similar to uniprot|P53049 Saccharomyces cerevisiae YGR281w YOR1 ATP-binding cassette transporter protein
YALI1_E30234g	Compare to YALI0E25223g, no similarity
YALI1_E30311g	Compare to YALI0E25443g, highly similar to uniprot|Q6CHJ4 Yarrowia lipolytica YALI0A08195g
YALI1_E30368g	Compare to YALI0E25608g, some similarities with uniprot|O14099 Schizosaccharomyces pombe Zinc finger protein
YALI1_E30373g	Compare to YALI0E25630g, no similarity
YALI1_E30400g	Compare to YALI0E25652g, similar to Saccharomyces cerevisiae NMA2 (YGR010W) and NMA1 (YLR328W); ancestral locus Anc_4.147, similar to uniprot|Q06178 Saccharomyces cerevisiae YLR328w NMA1 nicotinamide/nicotinic acid mononucleotide adenylyltransferase
YALI1_E30431g	Compare to YALI0E25674g, no similarity possibly noncoding
YALI1_E30462g	Compare to YALI0E25696g, similar to uniprot|Q9HGM9 Schizosaccharomyces pombe DNAJ domain protein
YALI1_E30479g	Compare to YALI0E25718g, similar to Saccharomyces cerevisiae IES6 (YEL044W); ancestral locus Anc_1.488, weakly similar to uniprot|P32617 Saccharomyces cerevisiae YEL044w similarity to SPAC222.04c hypothetical protein S. pombe
YALI1_E30496g	Compare to YALI0E25740g, similar to uniprot|Q07729 Saccharomyces cerevisiae YDL238c, similar to Saccharomyces cerevisiae GUD1 (YDL238C); ancestral locus Anc_2.20
YALI1_E30520g	Compare to YALI0E25762g, weakly similar to uniprot|P25588 Saccharomyces cerevisiae YCL061c related to Uridine Kinase URK1, similar to Saccharomyces cerevisiae MRC1 (YCL061C); ancestral locus Anc_1.5
YALI1_E30561g	Compare to YALI0E25784g, weakly similar to uniprot|Q9Y776 Candida tropicalis Secreted aspartic protease 4
YALI1_E30590g	Compare to YALI0E25806g, no similarity
YALI1_E30621g	Compare to YALI0E25828g, no similarity possibly noncoding
YALI1_E30639g	Compare to YALI0E25845g, uniprot|Q9P8X2 Yarrowia lipolytica GTP-binding protein Rac1p GTP-binding protein of RAS superfamily, similar to Saccharomyces cerevisiae RHO5 (YNL180C); ancestral locus Anc_2.75
YALI1_E30677g	Compare to YALI0E25850g, no similarity
YALI1_E30707g	Compare to YALI0E25872g, weakly similar to uniprot|Q07623 Saccharomyces cerevisiae YDL213c NOP6 similarity to hydrophilins involved in the adaptive response to hyperosmotic conditions, similar to Saccharomyces cerevisiae NOP6 (YDL213C); ancestral locus Anc_2.72
YALI1_E30725g	Compare to YALI0E25894g, similar to Saccharomyces cerevisiae MNN10 (YDR245W); ancestral locus Anc_8.471, similar to uniprot|P50108 Saccharomyces cerevisiae YDR245w MNN10 subunit of mannosyltransferase complex
YALI1_E30743g	Compare to YALI0E25916g, similar to Saccharomyces cerevisiae ILM1 (YJR118C); ancestral locus Anc_7.504, weakly similar to uniprot|P47155 Saccharomyces cerevisiae YJR118C ILM1 Protein of unknown function
YALI1_E30759g	Compare to YALI0E25960g, weakly similar to uniprot|P09547 Saccharomyces cerevisiae YPL016w SWI1 component of SWI/SNF global transcription activator complex, similar to Saccharomyces cerevisiae SWI1 (YPL016W); ancestral locus Anc_8.472
YALI1_E30815g	Compare to YALI0E25982g, uniprot|O74127 Yarrowia lipolytica ALK1 n-alkane- inducible cytochrome P450
YALI1_E30886g	Compare to YALI0E26004g, similar to uniprot|P14540 Saccharomyces cerevisiae YKL060c FBA1 fructose-bisphosphate aldolase, similar to Saccharomyces cerevisiae FBA1 (YKL060C); ancestral locus Anc_2.577
YALI1_E30914g	Compare to YALI0E26026g, similar to Saccharomyces cerevisiae YET3 (YDL072C); ancestral locus Anc_4.263, similar to DEHA0D12386g Debaryomyces hansenii
YALI1_E30942g	Compare to YALI0E26048g, similar to DEHA0D12364g Debaryomyces hansenii, similar to Saccharomyces cerevisiae DUS3 (YLR401C); ancestral locus Anc_4.264
YALI1_E30943g	Compare to YALI0E26059g, similar to Saccharomyces cerevisiae DUS4 (YLR405W); ancestral locus Anc_4.269, weakly similar to CA5416|IPF1576 Candida albicans
YALI1_E30958g	Compare to YALI0E26081g, similar to Saccharomyces cerevisiae YDR049W; ancestral locus Anc_3.293, similar to uniprot|Q04311 Saccharomyces cerevisiae YDR049w
YALI1_E31005g	Compare to YALI0E26125g, uniprot|Q8TFK5 Yarrowia lipolytica YlCWP1 Cell wall protein
YALI1_E31031g	Compare to YALI0E26147g, similar to Saccharomyces cerevisiae LIN1 (YHR156C); ancestral locus Anc_1.96, similar to uniprot|CAD70383 Neurospora crassa B17B1. 010
YALI1_E31034g	Compare to YALI0E26169g, similar to Saccharomyces cerevisiae YNL260C; ancestral locus Anc_1.97, weakly similar to uniprot|P53846 Saccharomyces cerevisiae YNL260c Hypothetical 23.3 kDa protein in ORC5- ATX1 intergenic region
YALI1_E31050g	Compare to YALI0E26191g, weakly similar to DEHA0E23389 Debaryomyces hansenii
YALI1_E31075g	Compare to YALI0E26235g, similar to Saccharomyces cerevisiae UFD1 (YGR048W); ancestral locus Anc_1.89, similar to uniprot|P53044 Saccharomyces cerevisiae YGR048w UFD1 ubiquitin fusion degradation protein
YALI1_E31131g	Compare to YALI0E26257g, similar to Saccharomyces cerevisiae YGL140C; ancestral locus Anc_1.90, weakly similar to uniprot|P53120 Saccharomyces cerevisiae YGL140c
YALI1_E31154g	Compare to YALI0E26279g, similar to uniprot|Q8DLR0 Synechococcus elongatus tll0418 Sulfolipid sulfoquinovosyldiacylglycerol biosynthesis protein
YALI1_E31186g	Compare to YALI0E26301g, similar to DEHA0E24266g Debaryomyces hansenii, similar to Saccharomyces cerevisiae CWC23 (YGL128C); ancestral locus Anc_1.92
YALI1_E31194g	Compare to YALI0E26323g, weakly similar to uniprot|P53845 Saccharomyces cerevisiae YNL263c YIF1 SLH1P Interacting Factor, similar to Saccharomyces cerevisiae YIF1 (YNL263C); ancestral locus Anc_1.93
YALI1_E31229g	Compare to YALI0E26345g, similar to DEHA0D10692g Debaryomyces hansenii
YALI1_E31248g	Compare to YALI0E26367g, similar to uniprot|P21951 Saccharomyces cerevisiae YNL262w POL2 DNA-directed DNA polymerase epsilon catalytic subunit A, similar to Saccharomyces cerevisiae POL2 (YNL262W); ancestral locus Anc_1.94
YALI1_E31351g	Compare to YALI0E26389g, similar to Saccharomyces cerevisiae ERB1 (YMR049C); ancestral locus Anc_2.613, similar to uniprot|Q04660 Saccharomyces cerevisiae YMR049c
YALI1_E31369g	Compare to YALI0E26433g, similar to Saccharomyces cerevisiae ECM15 (YBL001C); ancestral locus Anc_3.206, similar to uniprot|P35195 Saccharomyces cerevisiae YBL001c ECM15 involved in cell wall biogenesis and architecture
YALI1_E31389g	Compare to YALI0E26455g, similar to Saccharomyces cerevisiae HTB2 (YBL002W); ancestral locus Anc_3.207, similar to uniprot|P02293 Saccharomyces cerevisiae YDR224c HTB1 histone H2B
YALI1_E31396g	Compare to YALI0E26477g, similar to Saccharomyces cerevisiae HTA2 (YBL003C); ancestral locus Anc_3.208, highly similar to uniprot|P04912 Saccharomyces cerevisiae YBL003c HTA2 histone H2A
YALI1_E31446g	Compare to YALI0E26499g, no similarity possibly noncoding
YALI1_E31461g	Compare to YALI0E26521g, weakly similar to uniprot|P32380 Saccharomyces cerevisiae YDR356w NUF1 spindle pole body component P37.1. f4.1
YALI1_E31483g	Compare to YALI0E26543g, weakly similar to uniprot|Q9URQ3 Saccharomyces cerevisiae YLR316c TAD3 subunit of tRNA-specific adenosine- 34 deaminase, similar to Saccharomyces cerevisiae TAD3 (YLR316C); ancestral locus Anc_4.133
YALI1_E31498g	Compare to YALI0E26565g, weakly similar to uniprot|P17898 Saccharomyces cerevisiae YNL130c CPT1 diacylglycerol cholinephosphotransferase, similar to Saccharomyces cerevisiae EPT1 (YHR123W) and CPT1 (YNL130C); ancestral locus Anc_2.138
YALI1_E31529g	Compare to YALI0E26587g, similar to uniprot|P38786 Saccharomyces cerevisiae YHR062c RPP1 required for processing of tRNA and 35S rRNA, similar to Saccharomyces cerevisiae RPP1 (YHR062C); ancestral locus Anc_5.332
YALI1_E31565g	Compare to YALI0E26609g, similar to uniprot|P23292 Saccharomyces cerevisiae YNL154c YCK2 casein kinase I isoform
YALI1_E31592g	Compare to YALI0E26631g, no similarity possibly noncoding
YALI1_E31646g	Compare to YALI0E26653g, weakly similar to CAGL-IPF4629.1 Candida glabrata, similar to Saccharomyces cerevisiae YFL034W; ancestral locus Anc_8.32
YALI1_E31679g	Compare to YALI0E26686g, gnl|GLV|YALI0E26686g [Yarrowia lipolytica] similar to uniprot|Q9HW37 Pseudomonas aeruginosa Hypothetical protein
YALI1_E31685g	similar to Saccharomyces cerevisiae URA3 (YEL021W); ancestral locus Anc_1.453,OMP Decarboxylase (URA3)
YALI1_E31697g	Compare to YALI0E26763g, no similarity
YALI1_E31717g	Compare to YALI0E26785g, ancestral locus Anc_1.454, weakly similar to DEHA0A12441g Debaryomyces hansenii
YALI1_E31724g	Compare to YALI0E26807g, similar to Saccharomyces cerevisiae RBA50 (YDR527W); ancestral locus Anc_1.20, weakly similar to DEHA0E15961g Debaryomyces hansenii
YALI1_E31754g	Compare to YALI0E26829g, similar to Saccharomyces cerevisiae GAL10 (YBR019C); ancestral locus Anc_3.218, similar to uniprot|P04397 Saccharomyces cerevisiae YBR019c GAL10 UDP-glucose 4-epimerase
YALI1_E31772g	Compare to YALI0E26851g, similar to uniprot|Q9P748 Neurospora crassa Related to translation initiation factor 3
YALI1_E31805g	Compare to YALI0E26873g, weakly similar to uniprot|P39520 Saccharomyces cerevisiae YLR223c IFH1 pre-rRNA processing machinery control protein, similar to Saccharomyces cerevisiae CRF1 (YDR223W) and IFH1 (YLR223C); ancestral locus Anc_8.434
YALI1_E31827g	Compare to YALI0E26895g, similar to Saccharomyces cerevisiae GTB1 (YDR221W); ancestral locus Anc_8.431, weakly similar to DEHA0E18150g Debaryomyces hansenii
YALI1_E31865g	Compare to YALI0E26917g, no similarity
YALI1_E31891g	Compare to YALI0E26939g, similar to Saccharomyces cerevisiae REX2 (YLR059C); ancestral locus Anc_8.35, similar to uniprot|P54964 Saccharomyces cerevisiae YLR059c YNT20
YALI1_E31897g	Compare to YALI0E26961g, similar to Saccharomyces cerevisiae TUB2 (YFL037W); ancestral locus Anc_8.27, highly similar to uniprot|P02557 Saccharomyces cerevisiae YFL037w TUB2 beta-tubulin
YALI1_E31919g	Compare to YALI0E26983g, similar to Saccharomyces cerevisiae YBR220C; ancestral locus Anc_6.118, similar to uniprot|P38318 Saccharomyces cerevisiae YBR220c
YALI1_E31947g	Compare to YALI0E27005g, similar to Saccharomyces cerevisiae PDB1 (YBR221C); ancestral locus Anc_6.119, highly similar to uniprot|P32473 Saccharomyces cerevisiae YBR221c PDB1 pyruvate dehydrogenase (lipoamide) beta chain precursor
YALI1_E31974g	Truncated form of YALI0E27027g, similar to Saccharomyces cerevisiae SVP26 (YHR181W); ancestral locus Anc_5.57, similar to uniprot|P38869 Saccharomyces cerevisiae YHR181w
YALI1_E31982g	Truncated form of YALI0E27049g, weakly similar to uniprot|Q04781 Saccharomyces cerevisiae YMR247c similarity to hypothetical protein S. pombe, similar to Saccharomyces cerevisiae RKR1 (YMR247C); ancestral locus Anc_8.799
YALI1_E32033g	Compare to YALI0E27071g, similar to Saccharomyces cerevisiae TMA19 (YKL056C); ancestral locus Anc_2.584, similar to uniprot|P35691 Saccharomyces cerevisiae YKL056c strong similarity to human IgE-dependent histamine- releasing factor
YALI1_E32054g	Compare to YALI0E27093g, no similarity
YALI1_E32077g	Compare to YALI0E27115g, similar to AN8389 2 Aspergillus nidulans hypothetical protein
YALI1_E32096g	Compare to YALI0E27137g, similar to uniprot|Q12383 Saccharomyces cerevisiae YOL125W, similar to Saccharomyces cerevisiae TRM13 (YOL125W); ancestral locus Anc_3.46
YALI1_E32118g	Compare to YALI0E27159g, weakly similar to uniprot|P53389 Saccharomyces cerevisiae YNR055c HOL1 member of major facilitator superfamily multidrug-resistance protein subfamily
YALI1_E32152g	Compare to YALI0E27181g, similar to DEHA0A00979g Debaryomyces hansenii
YALI1_E32180g	Compare to YALI0E27203g, similar to uniprot|P41948 Saccharomyces cerevisiae YNL142w MEP2
YALI1_E32223g	Compare to YALI0E27225g, weakly similar to DEHA0A12617g Debaryomyces hansenii IPF 7288.1
YALI1_E32241g	Compare to YALI0E27247g, similar to uniprot|P53322 Saccharomyces cerevisiae YGR260w TNA1
YALI1_E32269g	Compare to YALI0E27269g, weakly similar to uniprot|P12954 Saccharomyces cerevisiae YJL092w HPR5 ATP-dependent DNA helicase
YALI1_E32315g	Compare to YALI0E27291g, similar to uniprot|Q96VC8 Yarrowia lipolytica Glyoxylate pathway regulator
YALI1_E32332g	Compare to YALI0E27346g, similar to Saccharomyces cerevisiae VMA2 (YBR127C); ancestral locus Anc_3.388, highly similar to uniprot|P16140 Saccharomyces cerevisiae YBR127c VMA2 H+-ATPase V1 domain 60 KD subunit vacuolar
YALI1_E32357g	Compare to YALI0E27368g, similar to Saccharomyces cerevisiae YCR095C; ancestral locus Anc_6.377, weakly similar to CA5000|IPF2023 Candida albicans
YALI1_E32361g	Compare to YALI0E27390g, no similarity possibly noncoding
YALI1_E32396g	Compare to YALI0E27412g, similar to uniprot|Q9P5S6 Neurospora crassa Conserved hypothetical protein, similar to Saccharomyces cerevisiae PTH2 (YBL057C); ancestral locus Anc_7.376
YALI1_E32411g	Converted to coding from non-coding YALI0E27456g, weakly similar to DEHA-IPF9690.1 Debaryomyces hansenii
YALI1_E32423g	Compare to YALI0E27511g, similar to uniprot|Q03558 Saccharomyces cerevisiae YHR179w OYE2 NADPH dehydrogenase (old yellow enzyme) isoform 1
YALI1_E32445g	Compare to YALI0E27533g, similar to Saccharomyces cerevisiae PTC7 (YHR076W); ancestral locus Anc_5.362, similar to CAGL0J10692g Candida glabrata
YALI1_E32461g	Converted to coding from non-coding YALI0E27555g, similar to uniprot|P39709 Saccharomyces cerevisiae YAL067c SEO1 suppressor of sulfoxyde ethionine resistance
YALI1_E32489g	Compare to YALI0E27588g, no similarity
YALI1_E32512g	Compare to YALI0E27616g, gnl|GLV|YALI0E27616g [Yarrowia lipolytica] similar to uniprot|Q7SD40 Neurospora crassa predicted protein
YALI1_E32568g	Compare to YALI0E27632g, uniprot|O93955 Yarrowia lipolytica SSL2 protein multicopy suppressor of SLS2 secretory defects putative calmodulin-dependent ser/thr protein kinase
YALI1_E32603g	Compare to YALI0E27654g, uniprot|O74937 Yarrowia lipolytica POX4 Acyl-CoA oxidase 4 (EC 1.3.3.6), peroxisomal
YALI1_E32622g	Compare to YALI0E27676g, similar to Saccharomyces cerevisiae RPC19 (YNL113W); ancestral locus Anc_2.163, similar to uniprot|P28000 Saccharomyces cerevisiae YNL113w RPC19 DNA-directed RNA polymerase I III 16 KD subunit
YALI1_E32636g	Compare to YALI0E27698g, similar to Saccharomyces cerevisiae CEX1 (YOR112W); ancestral locus Anc_2.165, weakly similar to uniprot|Q9HEA4 Neurospora crassa
YALI1_E32664g	Compare to YALI0E27715g, similar to Saccharomyces cerevisiae DBP2 (YNL112W); ancestral locus Anc_2.164, similar to uniprot|P24783 Saccharomyces cerevisiae YNL112w DBP2 ATP-dependent RNA helicase of DEAD box family
YALI1_E32693g	Compare to YALI0E27720g, ancestral locus Anc_2.116, similar to CAGL0J05786g Candida glabrata
YALI1_E32722g	Compare to YALI0E27742g, weakly similar to uniprot|P03069 Saccharomyces cerevisiae YEL009c GCN4 transcriptional activator of amino acid biosynthetic genes, similar to Saccharomyces cerevisiae GCN4 (YEL009C); ancestral locus Anc_7.131
YALI1_E32754g	Compare to YALI0E27764g, similar to uniprot|Q05892 Saccharomyces cerevisiae YLR290c, similar to Saccharomyces cerevisiae YLR290C; ancestral locus Anc_6.87
YALI1_E32776g	Compare to YALI0E27786g, similar to uniprot|Q08417 Saccharomyces cerevisiae YOR049C
YALI1_E32816g	Compare to YALI0E27808g, similar to uniprot|P38911 Saccharomyces cerevisiae YML074c NPI46 proline cis-trans isomerase, similar to Saccharomyces cerevisiae FPR4 (YLR449W) and FPR3 (YML074C); ancestral locus Anc_4.342
YALI1_E32842g	Compare to YALI0E27830g, similar to Saccharomyces cerevisiae RPL6B (YLR448W) and RPL6A (YML073C); ancestral locus Anc_4.341, similar to uniprot|Q02326 Saccharomyces cerevisiae YML073c YL16A 60S large subunit ribosomal protein
YALI1_E32868g	Compare to YALI0E27852g, similar to uniprot|P48777 Emericella nidulans UAPC Purine permease
YALI1_E32908g	Compare to YALI0E27874g, some similarities with uniprot|P21373 Saccharomyces cerevisiae YJR049c UTR1 associated with ferric reductase activity
YALI1_E32946g	Compare to YALI0E27896g, no similarity
YALI1_E33002g	Compare to YALI0E27918g, uniprot|AAO89567 Yarrowia lipolytica Putative actin- interacting protein 3, similar to Saccharomyces cerevisiae BUD6 (YLR319C); ancestral locus Anc_4.135
YALI1_E33024g	Compare to YALI0E27940g, highly similar to uniprot|Q12522 Saccharomyces cerevisiae YPR016c TIF6 translation initiation factor 6 (eIF6), similar to Saccharomyces cerevisiae TIF6 (YPR016C); ancestral locus Anc_8.118
YALI1_E33056g	Compare to YALI0E27962g, highly similar to uniprot|P31539 Saccharomyces cerevisiae YLL026w HSP104 heat shock protein
YALI1_E33094g	Compare to YALI0E27984g, ancestral locus Anc_8.218, similar to DEHA0E23727g Debaryomyces hansenii
YALI1_E33112g	Compare to YALI0E28006g, similar to uniprot|P43092 Candida albicans ACP3 Candidapepsin 3 precursor (EC 3.4.23.24) (Aspartate protease 3) (Secreted aspartic protease 3)
YALI1_E33150g	Compare to YALI0E28153g, similar to Saccharomyces cerevisiae STT4 (YLR305C); ancestral locus Anc_4.50, similar to uniprot|P37297 Saccharomyces cerevisiae YLR305c STT4 phosphatidylinositol-4-kinase
YALI1_E33220g	Compare to YALI0E28182g, similar to uniprot|Q06624 Saccharomyces cerevisiae YPR180W RHC31 DNA damage tolerance protein (RAD31 homolog)
YALI1_E33234g	Compare to YALI0E28204g, similar to uniprot|Q06623 Saccharomyces cerevisiae YPR179c PLO1, similar to Saccharomyces cerevisiae HDA2 (YDR295C); ancestral locus Anc_5.311
YALI1_E33268g	Compare to YALI0E28226g, similar to uniprot|P20053 Saccharomyces cerevisiae YPR178w PRP4 U4/U6 snRNP 52 KD protein
YALI1_E33285g	Compare to YALI0E28237g, similar to Saccharomyces cerevisiae DPL1 (YDR294C); ancestral locus Anc_5.310, similar to uniprot|Q05567 Saccharomyces cerevisiae YDR294C
YALI1_E33302g	Compare to YALI0E28248g, similar to uniprot|P20133 Saccharomyces cerevisiae YPR176c BET2 geranylgeranyltransferase type II beta subunit
YALI1_E33336g	Compare to YALI0E28259g, gnl|GLV|YALI0E28259g [Yarrowia lipolytica] some similarities with uniprot|Q6C7W6 Yarrowia lipolytica YALI0D24816g
YALI1_E33372g	Compare to YALI0E28270g, similar to uniprot|P32331 Saccharomyces cerevisiae YPR058w YMC1 mitochondrial carrier protein (MCF)
YALI1_E33400g	Compare to YALI0E28292g, similar to uniprot|Q10138 Schizosaccharomyces pombe Hypothetical protein C3H8.02 in chromosome I
YALI1_E33421g	Compare to YALI0E28314g, no similarity
YALI1_E33459g	Compare to YALI0E28336g, weakly similar to uniprot|Q08294 Saccharomyces cerevisiae YOL155c
YALI1_E33485g	Compare to YALI0E28358g, similar to Saccharomyces cerevisiae AVT2 (YEL064C); ancestral locus Anc_1.80, similar to KLLA0C02277g Kluyveromyces lactis IPF 6652.1
YALI1_E33527g	Compare to YALI0E28371g, similar to uniprot|P46675 Saccharomyces cerevisiae YLR045c STU2 suppressor of a cs tubulin mutation, similar to Saccharomyces cerevisiae STU2 (YLR045C); ancestral locus Anc_5.123
YALI1_E33540g	Compare to YALI0E28402g, weakly similar to DEHA0G02266g Debaryomyces hansenii IPF 912.1
YALI1_E33570g	Compare to YALI0E28424g, similar to uniprot|Q02854 Neurospora crassa NADH- ubiquinone oxidoreductase 21 kDa subunit (Complex I)
YALI1_E33599g	Compare to YALI0E28446g, some similarities with uniprot|Q04119 Saccharomyces cerevisiae YDR452w PHM5 similarity to human sphingomyelin phosphodiesterase
YALI1_E33633g	Compare to YALI0E28468g, similar to uniprot|P46655 Saccharomyces cerevisiae YGL245w Glutamyl-tRNA synthetase cytoplasmic, similar to Saccharomyces cerevisiae GUS1 (YGL245W); ancestral locus Anc_3.569
YALI1_E33642g	Compare to YALI0E28490g, similar to DEHA0F11572g Debaryomyces hansenii IPF 8214.1, similar to Saccharomyces cerevisiae RAI1 (YGL246C); ancestral locus Anc_3.570
YALI1_E33675g	Compare to YALI0E28512g, some similarities with DEHA0F18689g Debaryomyces hansenii IPF 7594.1 hypothical start, similar to Saccharomyces cerevisiae BRR6 (YGL247W); ancestral locus Anc_3.571
YALI1_E33760g	Compare to YALI0E28534g, weakly similar to uniprot|P33890 Saccharomyces cerevisiae YOR010c TIR2 cold shock induced protein P5.25. f5.1
YALI1_E33799g	Compare to YALI0E28548g, weakly similar to uniprot|Q6C4A1 Yarrowia lipolytica YALI0E28534g
YALI1_E33829g	Compare to YALI0E28556g, similar to Saccharomyces cerevisiae UBX4 (YMR067C); ancestral locus Anc_2.638, weakly similar to CAGL0F06633g Candida glabrata
YALI1_E33843g	Compare to YALI0E28578g, weakly similar to Candida albicans|CA2666|IPF16995 unknown function
YALI1_E33858g	Compare to YALI0E28600g, similar to Saccharomyces cerevisiae SEN34 (YAR008W); ancestral locus Anc_4.116, weakly similar to uniprot|P39707 Saccharomyces cerevisiae YAR008w FUN4 tRNA splicing endonuclease gamma subunit
YALI1_E33888g	Compare to YALI0E28622g, similar to uniprot|P33413 Saccharomyces cerevisiae YHL016c DUR3 urea transport protein
YALI1_E33934g	Compare to YALI0E28644g, weakly similar to uniprot|Q04748 Saccharomyces cerevisiae YMR066w SOV1 hypothetical protein singleton
YALI1_E33943g	Compare to YALI0E28666g, no similarity
YALI1_E34015g	Compare to YALI0E28699g, similar to Saccharomyces cerevisiae YGR263C; ancestral locus Anc_5.42, weakly similar to wi|NCU07890.1 Neurospora crassa NCU07890.1
YALI1_E34028g	Compare to YALI0E28721g, weakly similar to CA3804|CaRIM1 Candida albicans CaRIM1 telomere-binding protein (by homology)
YALI1_E34042g	Compare to YALI0E28743g, weakly similar to DEHA0F13849g Debaryomyces hansenii IPF 8029.1
YALI1_E34072g	Compare to YALI0E28787g, similar to uniprot|P47039 Saccharomyces cerevisiae YJL060w
YALI1_E34116g	Compare to YALI0E28809g, some similarities with DEHA0D08514g Debaryomyces hansenii IPF 1492.1
YALI1_E34156g	Compare to YALI0E28831g, weakly similar to CA1345|Candida albicans IPF6003
YALI1_E34163g	Compare to YALI0E28853g, weakly similar to wi|NCU05244.1 Neurospora crassa NCU05244.1 hypothetical protein (39359 - 38390)
YALI1_E34185g	Compare to YALI0E28875g, similar to uniprot|P09230 Yarrowia lipolytica XPR2 Alkaline extracellular protease precursor (EC 3.4.21.-) (AEP)
YALI1_E34205g	Compare to YALI0E28897g, similar to Saccharomyces cerevisiae SUB1 (YMR039C); ancestral locus Anc_2.602, similar to wi|NCU04584.1 Neurospora crassa NCU04584. 1 predicted protein (17071 - 16429)
YALI1_E34218g	Compare to YALI0E28919g, similar to Saccharomyces cerevisiae PHO13 (YDL236W); ancestral locus Anc_2.25, similar to uniprot|P19881 Saccharomyces cerevisiae YDL236w PHO13 4-nitrophenylphosphatase
YALI1_E34222g	Compare to YALI0E28930g, gnl|GLV|YALI0E28930g [Yarrowia lipolytica] similar to B16.6 Bos taurus accessory protein of NADH-ubiquinone reductase (complex I)
YALI1_E34238g	Compare to YALI0E28941g, weakly similar to uniprot|P53868 Saccharomyces cerevisiae YNL219c ALG9 mannosyltransferase, similar to Saccharomyces cerevisiae ALG9 (YNL219C); ancestral locus Anc_2.24
YALI1_E34269g	Compare to YALI0E28963g, similar to uniprot|P80210 Saccharomyces cerevisiae YNL220w ADE12 adenylosuccinate synthetase, similar to Saccharomyces cerevisiae ADE12 (YNL220W); ancestral locus Anc_2.23
YALI1_E34288g	Compare to YALI0E28985g, weakly similar to DEHA0G14729g Debaryomyces hansenii IPF 3995.1
YALI1_E34290g	Compare to YALI0E29007g, similar to Saccharomyces cerevisiae POP1 (YNL221C); ancestral locus Anc_2.22, weakly similar to uniprot|P41812 Saccharomyces cerevisiae YNL221C POP1 Ribonucleases P/MRP protein subunit (EC 3.1.26.5) (RNases P/MRP 100.4 kDa subunit) (RNA processing protein POP1)
YALI1_E34319g	Compare to YALI0E29029g, weakly similar to wi|NCU04512.1 Neurospora crassa NCU04512.1 hypothetical protein (20939 - 27751)
YALI1_E34322g	Compare to YALI0E29051g, weakly similar to CA3975|IPF20152 Candida albicans IPF 20152 unknown function, similar to Saccharomyces cerevisiae TPP1 (YMR156C); ancestral locus Anc_2.360
YALI1_E34344g	Compare to YALI0E29073g, highly similar to uniprot|P51401 Saccharomyces cerevisiae YNL067W RPL9B 60S ribosomal protein L9-B
YALI1_E34367g	Compare to YALI0E29095g, uniprot|Q6ZY23 Yarrowia lipolytica YALI0E29095g NUWM NADH-ubiquinone reductase accessory subunit (complexI)
YALI1_E34397g	Compare to YALI0E29117g, weakly similar to uniprot|P35732 Saccharomyces cerevisiae YKL054c VID31
YALI1_E34408g	Compare to YALI0E29139g, similar to uniprot|P48527 Saccharomyces cerevisiae YPL097W MSY1 Tyrosyl-tRNA synthetase mitochondrial precursor (EC 6.1.1.1) (Tyrosine--tRNA ligase) (TyrRS)
YALI1_E34425g	Compare to YALI0E29161g, similar to Saccharomyces cerevisiae FAB1 (YFR019W); ancestral locus Anc_1.360, similar to uniprot|P34756 Saccharomyces cerevisiae YFR019w FAB1 phosphatidylinositol 3-phosphate 5-kinase P10. 3.f8.1
YALI1_E34494g	Compare to YALI0E29205g, similar to Saccharomyces cerevisiae YFR018C; ancestral locus Anc_1.361, weakly similar to uniprot|P43599 Saccharomyces cerevisiae YFR018c
YALI1_E34513g	Compare to YALI0E29227g, similar to wi|NCU01253.1 Neurospora crassa NCU01253. 1 predicted protein (3246 - 1843)
YALI1_E34525g	Compare to YALI0E29249g, similar to uniprot|P18759 Saccharomyces cerevisiae YBR080C SEC18 Vesicular-fusion protein
YALI1_E34586g	Compare to YALI0E29271g, some similarities with uniprot|P54785 Saccharomyces cerevisiae YMR070w HMS1 high-copy suppressor of MOT1-SPT3 synthetic lethality, similar to Saccharomyces cerevisiae TOS8 (YGL096W) and CUP9 (YPL177C); ancestral locus Anc_6.170
YALI1_E34621g	Compare to YALI0E29293g, similar to uniprot|Q08920 Saccharomyces cerevisiae YPL178w SAE1 small subunit of the nuclear cap-binding protein complex CBC singleton, similar to Saccharomyces cerevisiae CBC2 (YPL178W); ancestral locus Anc_6.171
YALI1_E34650g	Compare to YALI0E29307g, similar to uniprot|P26570 Saccharomyces cerevisiae YML016c PPZ1 ser/thr phosphatase required for normal osmoregulation P12.1.f12.1, similar to Saccharomyces cerevisiae PPQ1 (YPL179W); ancestral locus Anc_6.172
YALI1_E34686g	Compare to YALI0E29315g, weakly similar to uniprot|Q12361 Saccharomyces cerevisiae YDL035c GPR1 G-protein coupled receptor singleton
YALI1_E34708g	Compare to YALI0E29337g, similar to Saccharomyces cerevisiae VPS45 (YGL095C); ancestral locus Anc_6.174, similar to uniprot|P38932 Saccharomyces cerevisiae YGL095c VPS45 vacuolar protein sorting-associated protein P4.30.f2.1
YALI1_E34711g	Compare to YALI0E29359g, similar to Saccharomyces cerevisiae TCO89 (YPL180W); ancestral locus Anc_6.175, weakly similar to uniprot|Q08921 Saccharomyces cerevisiae YPL180w SHD7
YALI1_E34745g	Compare to YALI0E29381g, weakly similar to uniprot|Q6C162 Yarrowia lipolytica YALI0F18920g
YALI1_E34784g	Compare to YALI0E29403g, similar to uniprot|P53010 Saccharomyces cerevisiae YGL094c PAN2 component of PAB1P-stimulated poly(A) ribonuclease singleton, similar to Saccharomyces cerevisiae PAN2 (YGL094C); ancestral locus Anc_6.176
YALI1_E34798g	Compare to YALI0E29425g, weakly similar to uniprot|P08640 Saccharomyces cerevisiae YIR019c STA1 extracellular alpha-1 4-glucan glucosidase
YALI1_E34857g	Compare to YALI0E29447g, similar to uniprot|P36125 Saccharomyces cerevisiae YKR030w weak similarity to NADH dehydrogenases singleton, similar to Saccharomyces cerevisiae GMH1 (YKR030W); ancestral locus Anc_1.252
YALI1_E34870g	Compare to YALI0E29469g, weakly similar to DEHA0A03817g Debaryomyces hansenii IPF 10715.1, similar to Saccharomyces cerevisiae YPL183W-A; ancestral locus Anc_6.178
YALI1_E34880g	Compare to YALI0E29491g, similar to CAGL0G03289g Candida glabrata IPF 3625.1
YALI1_E34933g	Truncated form of YALI0E29506g, similar to Saccharomyces cerevisiae UTP10 (YJL109C); ancestral locus Anc_1.253, similar to uniprot|P42945 Saccharomyces cerevisiae YJL109c weak similarity to ATPase DRS2P
YALI1_E34942g	Compare to YALI0E29535g, weakly similar to wi|NCU04740.1 Neurospora crassa NCU04740.1 predicted protein (112622 - 113926)
YALI1_E34979g	Compare to YALI0E29557g, similar to Saccharomyces cerevisiae HOF1 (YMR032W); ancestral locus Anc_2.591, some similarities with uniprot|Q05080 Saccharomyces cerevisiae YMR032w HOF1 involved in cytokinesis
YALI1_E35005g	Compare to YALI0E29579g, similar to Saccharomyces cerevisiae PCM1 (YEL058W); ancestral locus Anc_6.11, similar to uniprot|P38628 Saccharomyces cerevisiae YEL058w PCM1 phosphoacetylglucosamine mutase singleton
YALI1_E35012g	similar to Saccharomyces cerevisiae SOM1 (YEL059C-A); ancestral locus Anc_6.12
YALI1_E35023g	Compare to YALI0E29601g, similar to Saccharomyces cerevisiae MMS2 (YGL087C); ancestral locus Anc_6.187, similar to uniprot|P53152 Saccharomyces cerevisiae YGL087c MMS2 part of the error-free postreplication repair pathway singleton
YALI1_E35027g	Compare to YALI0E29623g, weakly similar to uniprot|P40957 Saccharomyces cerevisiae YGL086w MAD1 spindle assembly checkpoint protein, similar to Saccharomyces cerevisiae MAD1 (YGL086W); ancestral locus Anc_6.188
YALI1_E35067g	Compare to YALI0E29645g, similar to DEHA0E24420g Debaryomyces hansenii IPF 11008.1, similar to Saccharomyces cerevisiae BOR1 (YNL275W); ancestral locus Anc_1.73
YALI1_E35082g	Compare to YALI0E29667g, weakly similar to uniprot|P33421 Saccharomyces cerevisiae YKL141w SDH3 cytochrome b560 subunit of respiratory complex II, similar to Saccharomyces cerevisiae SDH3 (YKL141W) and YMR118C; ancestral locus Anc_2.423
YALI1_E35118g	Compare to YALI0E29689g, some similarities with DEHA0D17633g Debaryomyces hansenii IPF 2848.1, similar to Saccharomyces cerevisiae TAX4 (YJL083W) and IRS4 (YKR019C); ancestral locus Anc_1.284
YALI1_E35168g	Compare to YALI0E29711g, weakly similar to uniprot|P32901 Saccharomyces cerevisiae YKR093w PTR2 peptide transporter
YALI1_E35181g	Compare to YALI0E29733g, similar to uniprot|P47064 Saccharomyces cerevisiae YJL024c APS3 AP-3 complex subunit sigma3 subunit 22 KD P3. 84.f3.1, similar to Saccharomyces cerevisiae APS3 (YJL024C); ancestral locus Anc_5.187
YALI1_E35221g	Compare to YALI0E29755g, weakly similar to uniprot|P08640 Saccharomyces cerevisiae YIR019c STA1 extracellular alpha-1 4-glucan glucosidase P2.341.f2.1, similar to Saccharomyces cerevisiae FUS1 (YCL027W); ancestral locus Anc_1.48
YALI1_E35249g	Compare to YALI0E29777g, weakly similar to CA1588|CaSPT8 Candida albicans CaSPT8 transcriptional adaptor or co-activator (by homology)
YALI1_E35265g	Compare to YALI0E29843g, similar to Saccharomyces cerevisiae YGL079W; ancestral locus Anc_6.202, similar to uniprot|P53158 Saccharomyces cerevisiae YGL079w hypothetical protein singleton
YALI1_E35280g	Compare to YALI0E29865g, similar to Saccharomyces cerevisiae OXR1 (YPL196W); ancestral locus Anc_6.203, similar to uniprot|Q08952 Saccharomyces cerevisiae YPL196W OXR1 Chromosome XVI
YALI1_E35305g	Compare to YALI0E29887g, uniprot|Q96X28 Yarrowia lipolytica RAS2 GTPase
YALI1_E35329g	Compare to YALI0E29909g, similar to Saccharomyces cerevisiae KAP122 (YGL016W); ancestral locus Anc_4.105, weakly similar to uniprot|P32767 Saccharomyces cerevisiae YGL016W PDR6 Pleiotropic drug resistance regulatory protein 6
YALI1_E35384g	Compare to YALI0E29931g, some similarities with DEHA0F07194g Debaryomyces hansenii IPF 8554.1
YALI1_E35388g	Compare to YALI0E29953g, similar to Saccharomyces cerevisiae GPI15 (YNL038W); ancestral locus Anc_2.281, weakly similar to DEHA0C18260g Debaryomyces hansenii IPF 3283.1
YALI1_E35410g	Compare to YALI0E29975g, similar to Saccharomyces cerevisiae HEM13 (YDR044W); ancestral locus Anc_3.282, weakly similar to uniprot|P11353 Saccharomyces cerevisiae YDR044w HEM13 coproporphyrinogen III oxidase
YALI1_E35417g	Compare to YALI0E29997g, weakly similar to wi|NCU01283.1 Neurospora crassa NCU01283.1
YALI1_E35440g	Compare to YALI0E30019g, similar to Saccharomyces cerevisiae YIL096C; ancestral locus Anc_2.280, weakly similar to DEHA0A10318g Debaryomyces hansenii IPF 7096.1
YALI1_E35478g	Compare to YALI0E30085g, similar to Saccharomyces cerevisiae FYV10 (YIL097W); ancestral locus Anc_2.279, weakly similar to CA5663|IPF1251 Candida albicans IPF1251
YALI1_E35503g	Compare to YALI0E30107g, some similarities with uniprot|Q9VYU0 Drosophila melanogaster CG32662 protein
YALI1_E35520g	Compare to YALI0E30129g, similar to Saccharomyces cerevisiae GSH1 (YJL101C); ancestral locus Anc_1.265, similar to uniprot|P32477 Saccharomyces cerevisiae YJL101c GSH1 glutamate--cysteine ligase
YALI1_E35546g	Compare to YALI0E30151g, similar to uniprot|P40029 Saccharomyces cerevisiae YER042W MXR1 Peptide methionine sulfoxide reductase (Protein- methionine-S-oxide reductase)
YALI1_E35559g	Compare to YALI0E30173g, similar to uniprot|P33296 Saccharomyces cerevisiae YER100w UBC6 E2 ubiquitin-conjugating enzyme, similar to Saccharomyces cerevisiae UBC6 (YER100W); ancestral locus Anc_7.392
YALI1_E35580g	Compare to YALI0E30217g, similar to Saccharomyces cerevisiae RRP5 (YMR229C); ancestral locus Anc_8.757, similar to uniprot|Q05022 Saccharomyces cerevisiae YMR229c RRP5 processing of pre-ribosomal RNA P2.264.f2.1
YALI1_E35639g	Compare to YALI0E30261g, weakly similar to uniprot|P53122 Saccharomyces cerevisiae YGL138C Hypothetical 40.8 kDa protein in HUL5- SEC27 intergenic region, similar to Saccharomyces cerevisiae YGL138C; ancestral locus Anc_6.240
YALI1_E35652g	Compare to YALI0E30283g, similar to uniprot|P53154 Saccharomyces cerevisiae YGL084c GUP1, similar to Saccharomyces cerevisiae GUP1 (YGL084C) and GUP2 (YPL189W); ancestral locus Anc_6.190
YALI1_E35677g	Compare to YALI0E30305g, similar to uniprot|P53153 Saccharomyces cerevisiae YGL085w, similar to Saccharomyces cerevisiae YGL085W; ancestral locus Anc_6.189
YALI1_E35689g	Compare to YALI0E30327g, weakly similar to uniprot|Q9C0W5 Schizosaccharomyces pombe SPBC800.14C Hypothetical 17.7 kDa protein
YALI1_E35734g	Compare to YALI0E30349g, weakly similar to DEHA0F21252g Debaryomyces hansenii IPF 6452.1, similar to Saccharomyces cerevisiae SPP41 (YDR464W); ancestral locus Anc_5.587
YALI1_E35753g	Compare to YALI0E30371g, weakly similar to uniprot|P40033 Saccharomyces cerevisiae YER050c RSM18 component of the mitochondrial ribosomal small subunit singleton, similar to Saccharomyces cerevisiae RSM18 (YER050C); ancestral locus Anc_7.223
YALI1_E35759g	Compare to YALI0E30393g, weakly similar to DEHA0B02519g Debaryomyces hansenii IPF 9329.1, similar to Saccharomyces cerevisiae JHD1 (YER051W); ancestral locus Anc_7.224
YALI1_E35780g	Compare to YALI0E30415g, highly similar to uniprot|P01149 Saccharomyces cerevisiae YPL187w MFalpha1 mating pheromone alpha-1 precursor, similar to Saccharomyces cerevisiae MF(ALPHA)2 (YGL089C) and MF(ALPHA)1 (YPL187W); ancestral locus Anc_6.185
YALI1_E35815g	Compare to YALI0E30481g, similar to Saccharomyces cerevisiae PRO2 (YOR323C); ancestral locus Anc_7.71, similar to uniprot|P54885 Saccharomyces cerevisiae YOR323c PRO2 gamma-glutamyl phosphate reductase
YALI1_E35831g	Compare to YALI0E30503g, no similarity
YALI1_E35843g	Compare to YALI0E30525g, weakly similar to wi|NCU08967.1 Neurospora crassa NCU08967.1 predicted protein (36419 - 34195), similar to Saccharomyces cerevisiae YLR392C; ancestral locus Anc_4.252
YALI1_E35888g	Compare to YALI0E30547g, similar to DEHA0D04004g Debaryomyces hansenii IPF 10450.1, similar to Saccharomyces cerevisiae SNT2 (YGL131C); ancestral locus Anc_6.229
YALI1_E35934g	Compare to YALI0E30569g, similar to Saccharomyces cerevisiae LEA1 (YPL213W); ancestral locus Anc_6.230, similar to uniprot|O73931 Salmo salar U2 snRNP- specific A protein
YALI1_E35955g	Compare to YALI0E30591g, similar to Saccharomyces cerevisiae BPL1 (YDL141W); ancestral locus Anc_7.315, similar to uniprot|P48445 Saccharomyces cerevisiae YDL141w BPL1 biotin holocarboxylase synthetase singleton
YALI1_E35963g	Compare to YALI0E30602g, similar to Saccharomyces cerevisiae RPL36A (YMR194W) and RPL36B (YPL249C-A); ancestral locus Anc_6.283,gnl|GLV|YALI0E30602g [Yarrowia lipolytica] similar to uniprot|O14455 Saccharomyces cerevisiae YPL249C-A R36B 60S ribosomal protein L36-B (L39B)
YALI1_E35971g	similar to Saccharomyces cerevisiae YLR218C; ancestral locus Anc_7.311
YALI1_E35982g	Compare to YALI0E30613g, weakly similar to uniprot|Q872V0 Neurospora crassa B23G1.040
YALI1_E35988g	Compare to YALI0E30635g, similar to Saccharomyces cerevisiae SEC31 (YDL195W); ancestral locus Anc_7.310, uniprot|Q8J0E5 Yarrowia lipolytica Sec31p component of the COPII coat of ER-golgi vesicles
YALI1_E36036g	Compare to YALI0E30657g, weakly similar to uniprot|Q7SB12 Neurospora crassa NCU07881.1 predicted protein (19541 - 18555)
YALI1_E36057g	Compare to YALI0E30679g, some similarities with uniprot|Q95TU2 Drosophila melanogaster LD23187p (CG6686-PA)
YALI1_E36079g	Compare to YALI0E30701g, similar to CA0774|IPF11974 Candida albicans IPF11974 unknown function
YALI1_E36098g	Compare to YALI0E30723g, similar to Saccharomyces cerevisiae TRM1 (YDR120C); ancestral locus Anc_8.274, similar to uniprot|P15565 Saccharomyces cerevisiae YDR120C TRM1 N(2) N(2)-dimethylguanosine tRNA methyltransferase mitochondrial precursor (EC 2.1.1.32) (tRNA(guanine-26 N(2)-N(2)) methyltransferase) (tRNA 2 2- dimethylguanosine-26 methyltransferase) (tRNA(m(2 2)G26)dimethyltransferase)
YALI1_E36103g	Compare to YALI0E30745g, similar to Saccharomyces cerevisiae YLR099W-A; ancestral locus Anc_8.285, weakly similar to KLLA0F19646g Kluyveromyces lactis IPF 582.1
YALI1_E36116g	Compare to YALI0E30767g, no similarity
YALI1_E36140g	Compare to YALI0E30789g, weakly similar to DEHA0A12749g Debaryomyces hansenii IPF 7296.1
YALI1_E36179g	Compare to YALI0E30811g, similar to Saccharomyces cerevisiae RPL32 (YBL092W); ancestral locus Anc_7.424, highly similar to uniprot|P38061 Saccharomyces cerevisiae YBL092w RPL32 60S large subunit ribosomal protein L32.e
YALI1_E36206g	Compare to YALI0E30833g, weakly similar to uniprot|P21133 Emericella nidulans PENDE Acyl-coenzyme A:6-aminopenicillanic-acid- acyltransferase precursor (EC 2.3.1.-)(Isopenicillin N acyltransferase)
YALI1_E36308g	Compare to YALI0E30855g, similar to wi|NCU00459.1 Neurospora crassa NCU00459. 1 hypothetical protein (40655 - 49819)
YALI1_E36334g	Compare to YALI0E30877g, weakly similar to uniprot|P34167 Saccharomyces cerevisiae YPR163c TIF3 translation initiation factor eIF4B singleton
YALI1_E36365g	Compare to YALI0E30899g, similar to uniprot|P26570 Saccharomyces cerevisiae YML016c PPZ1 ser/thr phosphatase required for normal osmoregulation
YALI1_E36395g	Compare to YALI0E30921g, weakly similar to uniprot|Q7SFY9 Neurospora crassa NCU03105.1 predicted protein (39797 - 38088)
YALI1_E36404g	Compare to YALI0E30943g, similar to uniprot|O94363 Schizosaccharomyces pombe SPBC428.16C GTP-binding protein Rheb homolog
YALI1_E36437g	Compare to YALI0E30965g, similar to Saccharomyces cerevisiae ACH1 (YBL015W); ancestral locus Anc_8.161, similar to uniprot|P32316 Saccharomyces cerevisiae YBL015W ACH1 Acetyl-CoA hydrolase (EC 3.1.2.1) (Acetyl-CoA deacylase) (Acetyl-CoA acylase)
YALI1_E36472g	Compare to YALI0E30987g, similar to Saccharomyces cerevisiae YMR262W; ancestral locus Anc_8.814, similar to uniprot|P41890 Schizosaccharomyces pombe Cut9 interacting protein scn1
YALI1_E36477g	Compare to YALI0E31009g, similar to uniprot|P27515 Saccharomyces cerevisiae YNR012w URK1 uridine kinase P2.152.f2.1
YALI1_E36494g	Compare to YALI0E31031g, weakly similar to uniprot|Q88XB6 Lactobacillus plantarum Cell surface SD repeat protein precursor
YALI1_E36540g	Compare to YALI0E31064g, similar to uniprot|P27514 Saccharomyces cerevisiae YNR013c
YALI1_E36568g	Compare to YALI0E31086g, similar to Saccharomyces cerevisiae TSL1 (YML100W) and TPS3 (YMR261C); ancestral locus Anc_8.813, similar to uniprot|Q9P918 Pichia angusta Trehalose phosphate synthase subunit
YALI1_E36619g	Compare to YALI0E31108g, similar to Saccharomyces cerevisiae CWP1 (YKL096W); ancestral locus Anc_2.485, similar to uniprot|Q8TFK5 Yarrowia lipolytica Cell wall protein
YALI1_E36641g	Compare to YALI0E31130g, some similarities with CA2947|IPF6298 Candida albicans
YALI1_E36682g	Compare to YALI0E31152g, no similarity
YALI1_E36692g	Compare to YALI0E31174g, no similarity
YALI1_E36758g	Compare to YALI0E31196g, weakly similar to wi|NCU03263.1 Neurospora crassa NCU03263.1
YALI1_E36773g	Compare to YALI0E31218g, weakly similar to uniprot|Q07549 Saccharomyces cerevisiae YDL123w similarity to hypothetical protein
YALI1_E36789g	Compare to YALI0E31240g, no similarity
YALI1_E36805g	Compare to YALI0E31262g, weakly similar to uniprot|P53096 Saccharomyces cerevisiae YGL194c HOS2 putative histone deacetylase
YALI1_E36837g	Compare to YALI0E31273g, weakly similar to uniprot|Q8SY55 Drosophila melanogaster GH09355p, similar to Saccharomyces cerevisiae RAD9 (YDR217C); ancestral locus Anc_8.426
YALI1_E36847g	Compare to YALI0E31288g, weakly similar to uniprot|Q12191 Saccharomyces cerevisiae YDL099w
YALI1_E36866g	Compare to YALI0E31317g, similar to uniprot|Q03799 Saccharomyces cerevisiae YMR158w, similar to Saccharomyces cerevisiae MRPS8 (YMR158W); ancestral locus Anc_2.357
YALI1_E36887g	Compare to YALI0E31339g, weakly similar to uniprot|Q9P7E1 Schizosaccharomyces pombe Zf-C3HC4 ring finger protein
YALI1_E36900g	Compare to YALI0E31361g, similar to uniprot|Q9HF33 Arthrobotrys dactyloides Calmodulin-binding protein kinase
YALI1_E36937g	Compare to YALI0E31383g, weakly similar to KLLA0A04169g Kluyveromyces lactis IPF 8725.1
YALI1_E36984g	Compare to YALI0E31405g, similar to Saccharomyces cerevisiae MAM3 (YOL060C); ancestral locus Anc_3.168, similar to ca|CA5025|CaAMI3 Candida albicans CaAMI3 protein required for normal mitochondrial structure (by homology)
YALI1_E37026g	Compare to YALI0E31427g, similar to CA3464|CaDBP5 Candida albicans CaDBP5 RNA helicase (by homology)
YALI1_E37040g	Compare to YALI0E31449g, similar to uniprot|Q12464 Saccharomyces cerevisiae YPL235W RVB2 RUVB-like protein
YALI1_E37063g	Truncated form of YALI0E31471g, highly similar to uniprot|P32842 Saccharomyces cerevisiae YPL234c TFP3 H+-ATPase V0 domain 17 KD subunit vacuolar
YALI1_E37095g	Compare to YALI0E31493g, weakly similar to uniprot|Q9C280 Neurospora crassa Conserved hypothetical protein
YALI1_E37118g	Compare to YALI0E31515g, similar to Saccharomyces cerevisiae TGL2 (YDR058C); ancestral locus Anc_1.101, similar to CA5070|IPF3594 Candida albicans IPF3594 triglyceride lipase (by homology)
YALI1_E37157g	Compare to YALI0E31537g, weakly similar to uniprot|Q3E784 Saccharomyces cerevisiae YER180C-A Pi
YALI1_E37198g	Compare to YALI0E31551g, ancestral locus Anc_1.102, similar to Saccharomyces cerevisiae ARP10 (YDR106W); ancestral locus Anc_8.251, some similarities with uniprot|Q04549 Saccharomyces cerevisiae YDR106W ARP10 Actin-like protein and wi|NCU07179.1 Neurospora crassa NCU07179.1 hypothetical protein
YALI1_E37234g	Compare to YALI0E31559g, no similarity
YALI1_E37264g	Compare to YALI0E31581g, weakly similar to uniprot|Q871S2 Neurospora crassa 7F4.170 Related to acid sphingomyelinase
YALI1_E37325g	Compare to YALI0E31603g, similar to KLLA0B14839g Kluyveromyces lactis IPF 6866.1
YALI1_E37387g	Compare to YALI0E31625g, similar to CA3993|IPF8275 Candida albicans IPF8275, similar to Saccharomyces cerevisiae UTP22 (YGR090W); ancestral locus Anc_3.426
YALI1_E37392g	Compare to YALI0E31647g, similar to CA4625|IPF5742 Candida albicans IPF5742 thioredoxin-like protein (by homology)
YALI1_E37419g	Compare to YALI0E31669g, weakly similar to uniprot|P35192 Saccharomyces cerevisiae YMR021c MAC1 metal binding activator singleton
YALI1_E37455g	Compare to YALI0E31691g, similar to Saccharomyces cerevisiae SUI3 (YPL237W); ancestral locus Anc_6.264, weakly similar to uniprot|P35192 Saccharomyces cerevisiae YMR021c MAC1 metal binding activator singleton
YALI1_E37484g	Compare to YALI0E31713g, similar to Saccharomyces cerevisiae FAR8 (YMR029C); ancestral locus Anc_2.583, similar to uniprot|P38129 Saccharomyces cerevisiae YBR198c T2D4 Transcription initiation factor TFIID 90 kDa subunit (TAFII-90)
YALI1_E37494g	Compare to YALI0E31735g, weakly similar to DEHA-IPF1244.1 Debaryomyces hansenii
YALI1_E37574g	Truncated form of YALI0E31757g, weakly similar to uniprot|Q8X0W7 Neurospora crassa 123A4.250 Related to NsdD protein
YALI1_E37603g	Compare to YALI0E31766g, gnl|GLV|YALI0E31766g [Yarrowia lipolytica] similar to B18 Bos taurus accessory protein of NADH- ubiquinone reductase (complex I)
YALI1_E37724g	Compare to YALI0E31779g, similar to Saccharomyces cerevisiae TYW1 (YPL207W); ancestral locus Anc_6.220, similar to uniprot|Q08960 Saccharomyces cerevisiae YPL207w YP07 Hypothetical 89.8 kDa protein
YALI1_E37749g	Compare to YALI0E31793g, weakly similar to KLLA0B02398g Kluyveromyces lactis IPF 7733.1
YALI1_E37764g	Compare to YALI0E31797g, similar to uniprot|P43636 Saccharomyces cerevisiae YGL065c ALG2 Glycosyltransferase, similar to Saccharomyces cerevisiae ALG2 (YGL065C); ancestral locus Anc_6.219
YALI1_E37792g	Compare to YALI0E31823g, weakly similar to uniprot|O94397 Schizosaccharomyces pombe, similar to Saccharomyces cerevisiae SGF73 (YGL066W); ancestral locus Anc_6.218
YALI1_E37812g	Compare to YALI0E31845g, weakly similar to uniprot|Q7SH63 Neurospora crassa NCU02666.1
YALI1_E37830g	Compare to YALI0E31867g, weakly similar to uniprot|P33895 Saccharomyces cerevisiae YOL069w NUF2 spindle pole body protein singleton, similar to Saccharomyces cerevisiae NUF2 (YOL069W); ancestral locus Anc_3.149
YALI1_E37863g	Compare to YALI0E31889g, weakly similar to uniprot|Q8EL71 Oceanobacillus iheyensis Hypothetical conserved protein
YALI1_E37886g	Compare to YALI0E31911g, highly similar to uniprot|P53030 Saccharomyces cerevisiae YPL220w RPL1A and highly similar to uniprot|P53030 Saccharomyces cerevisiae YGL135W RPL1B Ribosomal Protein of the Large subunit, similar to Saccharomyces cerevisiae RPL1B (YGL135W) and RPL1A (YPL220W); ancestral locus Anc_6.237
YALI1_E37895g	Compare to YALI0E31933g, similar to uniprot|P53123 Saccharomyces cerevisiae YGL136c Putative ribosomal RNA methyltransferase (EC 2.1.1. -) (rRNA (uridine-2 -O-)-methyltransferase), similar to Saccharomyces cerevisiae MRM2 (YGL136C); ancestral locus Anc_6.238
YALI1_E37930g	Compare to YALI0E31955g, similar to Saccharomyces cerevisiae RPL33B (YOR234C) and RPL33A (YPL143W); ancestral locus Anc_8.655, highly similar to uniprot|P41056 Saccharomyces cerevisiae YOR234c RPL37B ribosomal protein L35a.e.c15 P2. 57.f2.1
YALI1_E37939g	Compare to YALI0E31977g, weakly similar to uniprot|P39712 Saccharomyces cerevisiae YAL063c FLO9
YALI1_E37950g	Compare to YALI0E31999g, no similarity
YALI1_E37982g	Compare to YALI0E32035g, weakly similar to uniprot|P34163 Saccharomyces cerevisiae YKL140w TGL1 triacylglycerol lipase P3.90.f3.1
YALI1_E38020g	Compare to YALI0E32043g, similar to uniprot|Q05946 Saccharomyces cerevisiae YLR222c UTP13
YALI1_E38034g	Compare to YALI0E32065g, similar to uniprot|P32352 Saccharomyces cerevisiae YMR202W ERG2 C-8 sterol isomerase (Delta-8--delta-7 sterol isomerase), similar to Saccharomyces cerevisiae ERG2 (YMR202W); ancestral locus Anc_6.300
YALI1_E38050g	Compare to YALI0E32087g, weakly similar to CAGL0D03938g Candida glabrata IPF 4713.1
YALI1_E38056g	Compare to YALI0E32109g, similar to Saccharomyces cerevisiae SPT7 (YBR081C); ancestral locus Anc_3.307, similar to uniprot|P35177 Saccharomyces cerevisiae YBR081C Transcriptional activator SPT7
YALI1_E38107g	Compare to YALI0E32131g, similar to Saccharomyces cerevisiae YOS9 (YDR057W); ancestral locus Anc_3.306, weakly similar to uniprot|Q99220 Saccharomyces cerevisiae YDR057w YOS9 plays a role in ER to Golgi intracellular trafficking of GPI-anchored proteins
YALI1_E38113g	Compare to YALI0E32153g, similar to Saccharomyces cerevisiae MRPL35 (YDR322W); ancestral locus Anc_5.360, weakly similar to uniprot|Q06678 Saccharomyces cerevisiae YDR322w MRPL35 ribosomal protein YmL35 of the large subunit mitochondrial singleton
YALI1_E38131g	Compare to YALI0E32164g, gnl|GLV|YALI0E32164g [Yarrowia lipolytica] similar to uniprot|P81449 Saccharomyces cerevisiae YDR322Ca ATP21 ATP synthase e chain mitochondrial, similar to Saccharomyces cerevisiae TIM11 (YDR322C-A); ancestral locus Anc_5.361
YALI1_E38136g	Compare to YALI0E32175g, weakly similar to DEHA-IPF4482.1 Debaryomyces hansenii
YALI1_E38164g	Truncated form of YALI0E32197g, no similarity
YALI1_E38178g	Compare to YALI0E32208g, gnl|GLV|YALI0E32208g [Yarrowia lipolytica] similar to uniprot|P05749 Saccharomyces cerevisiae YLR061W 60S ribosomal protein L22-A (YL31) (RP4), similar to Saccharomyces cerevisiae RPL22B (YFL034C-A) and RPL22A (YLR061W); ancestral locus Anc_8.31
YALI1_E38193g	Compare to YALI0E32219g, similar to Saccharomyces cerevisiae YLR063W; ancestral locus Anc_8.30, similar to uniprot|Q12291 Saccharomyces cerevisiae YLR063w hypothetical protein singleton
YALI1_E38208g	Compare to YALI0E32241g, some similarities with uniprot|Q08873 Saccharomyces cerevisiae YOR367w SCP1, similar to Saccharomyces cerevisiae SCP1 (YOR367W); ancestral locus Anc_7.14
YALI1_E38218g	Compare to YALI0E32263g, no similarity
YALI1_E38239g	Compare to YALI0E32285g, no similarity
YALI1_E38243g	Compare to YALI0E32307g, some similarities with uniprot|Q90941 Gallus gallus PB1 Polybromo 1 protein, similar to Saccharomyces cerevisiae RSC4 (YKR008W); ancestral locus Anc_2.518
YALI1_E38266g	Compare to YALI0E32329g, some similarities with uniprot|Q95XU8 Caenorhabditis elegans
YALI1_E38308g	Compare to YALI0E32351g, highly similar to uniprot|P38620 Saccharomyces cerevisiae YER099c PRS2 ribose-phosphate pyrophosphokinase P5.15.f5.1
YALI1_E38329g	Compare to YALI0E32373g, similar to Saccharomyces cerevisiae MED6 (YHR058C); ancestral locus Anc_5.324, weakly similar to uniprot|P38782 Saccharomyces cerevisiae YHR058c MED6 RNA polymerase II transcriptional regulation mediator singleton
YALI1_E38349g	Compare to YALI0E32395g, weakly similar to uniprot|P08640 Saccharomyces cerevisiae YIR019c STA1 extracellular alpha-1 4-glucan glucosidase P2.341.f2.1
YALI1_E38389g	Compare to YALI0E32417g, similar to Saccharomyces cerevisiae INO4 (YOL108C); ancestral locus Anc_3.75, weakly similar to CA2723|IPF4805 Candida albicans IPF4805
YALI1_E38443g	Compare to YALI0E32439g, similar to Saccharomyces cerevisiae HRT3 (YLR097C); ancestral locus Anc_8.281, weakly similar to uniprot|Q12347 Saccharomyces cerevisiae Chromosome XII reading frame ORF YLR097C
YALI1_E38479g	Compare to YALI0E32461g, weakly similar to CAGL0C01067g Candida glabrata IPF 9648.3
YALI1_E38491g	Compare to YALI0E32483g, similar to Saccharomyces cerevisiae MSS51 (YLR203C); ancestral locus Anc_7.346, similar to uniprot|P32335 Saccharomyces cerevisiae YLR203C MSS51 protein possibly involved in translational activation of COX1 and COB mRNA singleton
YALI1_E38512g	Compare to YALI0E32494g, similar to Saccharomyces cerevisiae YMR31 (YFR049W); ancestral locus Anc_3.572,gnl|GLV|YALI0E32494g [Yarrowia lipolytica] similar to uniprot|P19955 Saccharomyces cerevisiae YFR049W RT31 40S ribosomal protein YMR-31 mitochondrial precursor
YALI1_E38526g	Compare to YALI0E32505g, similar to Saccharomyces cerevisiae PRE4 (YFR050C); ancestral locus Anc_3.574, similar to uniprot|P30657 Saccharomyces cerevisiae YFR050c PRE4 Proteasome component
YALI1_E38561g	Compare to YALI0E32527g, weakly similar to uniprot|Q7RZX4 Neurospora crassa NCU00237.1 hypothetical protein, similar to Saccharomyces cerevisiae PDE1 (YGL248W); ancestral locus Anc_3.573
YALI1_E38593g	Truncated form of YALI0E32542g, similar to uniprot|P43621 Saccharomyces cerevisiae YFR051c RET2 coatomer complex delta chain, similar to Saccharomyces cerevisiae RET2 (YFR051C); ancestral locus Anc_3.575
YALI1_E38608g	Compare to YALI0E32571g, similar to uniprot|O74689 Emericella nidulans NUDE Nuclear distribution protein
YALI1_E38640g	Compare to YALI0E32593g, similar to Saccharomyces cerevisiae VPS9 (YML097C); ancestral locus Anc_8.876, weakly similar to uniprot|P54787 Saccharomyces cerevisiae YML097c VPS9 vacuolar sorting protein singleton
YALI1_E38656g	Compare to YALI0E32615g, similar to Saccharomyces cerevisiae ATS1 (YAL020C); ancestral locus Anc_7.79, weakly similar to uniprot|P31386 Saccharomyces cerevisiae YAL020c ATS1 alpha-tubulin suppressor singleton
YALI1_E38677g	Compare to YALI0E32637g, similar to Saccharomyces cerevisiae OPI10 (YOL032W); ancestral locus Anc_7.99, similar to CA5128|IPF5118 Candida albicans IPF5118
YALI1_E38692g	Compare to YALI0E32659g, no similarity
YALI1_E38701g	Compare to YALI0E32681g, similar to Saccharomyces cerevisiae LTP1 (YPR073C); ancestral locus Anc_3.371, similar to uniprot|P40347 Saccharomyces cerevisiae YPR073c LTP1 protein-tyrosine-phosphatase
YALI1_E38706g	Compare to YALI0E32703g, uniprot|Q99158 Yarrowia lipolytica Sls1p protein precursor involved in protein secretion Nucleotide exchange factor for Kar2p, similar to Saccharomyces cerevisiae SIL1 (YOL031C); ancestral locus Anc_7.98
YALI1_E38744g	Compare to YALI0E32725g, weakly similar to DEHA0G11792g Debaryomyces hansenii IPF 4088.1
YALI1_E38749g	Compare to YALI0E32736g, similar to Saccharomyces cerevisiae HNT2 (YDR305C); ancestral locus Anc_5.326,gnl|GLV|YALI0E32736g [Yarrowia lipolytica] similar to uniprot|P49776| Schizosaccharomyces pombe Bis(5'-nucleosyl)-tetraphosphatase (Ap4A hydrolase)
YALI1_E38766g	Compare to YALI0E32747g, similar to Saccharomyces cerevisiae FYV4 (YHR059W); ancestral locus Anc_5.325, weakly similar to uniprot|P38783 Saccharomyces cerevisiae YHR059w
YALI1_E38810g	Compare to YALI0E32769g, similar to Saccharomyces cerevisiae DGA1 (YOR245C); ancestral locus Anc_8.675, some similarities with uniprot|Q08650 Saccharomyces cerevisiae YOR245C DGA1 acyl-CoA:diacylglycerol acyltransferase
YALI1_E38859g	Compare to YALI0E32791g, similar to uniprot|Q9P543 Neurospora crassa B24H17. 10 Related to multifunctional cyclin-dependent kinase PHO85, similar to Saccharomyces cerevisiae GDE1 (YPL110C); ancestral locus Anc_8.599
YALI1_E38896g	Compare to YALI0E32813g, similar to uniprot|Q02981 Saccharomyces cerevisiae YPL109c similarity to aminoglycoside acetyltransferase regulator from P. stuartii singleton, similar to Saccharomyces cerevisiae YPL109C; ancestral locus Anc_8.598
YALI1_E38912g	Compare to YALI0E32835g, uniprot|O74934 Yarrowia lipolytica POX1 Acyl-CoA oxidase 1 (EC 1.3.3.6), peroxisomal, specific toward dicarboxilic acid
YALI1_E39057g	Compare to YALI0E32857g, similar to uniprot|P36022 Saccharomyces cerevisiae YKR054c DYN1 dynein heavy chain cytosolic, similar to Saccharomyces cerevisiae DYN1 (YKR054C); ancestral locus Anc_1.216
YALI1_E39083g	Compare to YALI0E32879g, weakly similar to uniprot|Q7RZA3 Neurospora crassa NCU03965.1
YALI1_E39128g	Compare to YALI0E32901g, similar to uniprot|P36035 Saccharomyces cerevisiae YKL217W JEN1 Carboxylic acid transporter protein homolog
YALI1_E39171g	Compare to YALI0E32967g, weakly similar to uniprot|Q97P71 Streptococcus pneumoniae SP1772 Cell wall surface anchor family protein
YALI1_E39193g	Compare to YALI0E32989g, no similarity
YALI1_E39210g	Compare to YALI0E33011g, weakly similar to uniprot|P45900 Bacillus subtilis YQAC_BACSU Hypothetical protein yqaC precursor
YALI1_E39221g	Compare to YALI0E33033g, similar to Saccharomyces cerevisiae ADE1 (YAR015W); ancestral locus Anc_3.179, similar to uniprot|Q9C1J4 Pichia pastoris Phosphoribosylamidoimidazole-succinocarboxamide synthase (EC 6.3.2.6) (SAICAR synthetase)
YALI1_E39228g	Compare to YALI0E33055g, no similarity
YALI1_E39243g	Compare to YALI0E33077g, similar to uniprot|Q12425 Saccharomyces cerevisiae YPR067w ISA2 mitochondrial protein required for iron metabolism singleton and similar to DEHA0F05324g Debaryomyces hansenii IPF 8683.1
YALI1_E39248g	Truncated form of YALI0E33099g, similar to uniprot|P42837 Saccharomyces cerevisiae YNL325c FIG4, similar to Saccharomyces cerevisiae FIG4 (YNL325C); ancestral locus Anc_3.14
YALI1_E39284g	Compare to YALI0E33121g, similar to Saccharomyces cerevisiae RRP40 (YOL142W); ancestral locus Anc_3.13, similar to uniprot|Q08285 Saccharomyces cerevisiae YOL142w RRP40 protein involved in ribosomal RNA processing component of the exosome complex responsible for 3 end processing and degradation of many RNA species singleton
YALI1_E39295g	Compare to YALI0E33143g, highly similar to uniprot|Q12074 Saccharomyces cerevisiae YPR069c SPE3 putrescine aminopropyltransferase (spermidine synthase) P2.22.f2.1
YALI1_E39306g	Compare to YALI0E33165g, similar to Saccharomyces cerevisiae TLG2 (YOL018C); ancestral locus Anc_1.372, similar to uniprot|Q08144 Saccharomyces cerevisiae YOL018c TLG2 member of the syntaxin family of t-SNAREs P2. 143.f2.1
YALI1_E39333g	Compare to YALI0E33187g, no similarity
YALI1_E39335g	Compare to YALI0E33209g, similar to uniprot|Q9P3K9 Neurospora crassa Conserved hypothetical protein
YALI1_E39378g	Compare to YALI0E33231g, similar to Saccharomyces cerevisiae RTT103 (YDR289C); ancestral locus Anc_5.300, weakly similar to DEHA0A13926g Debaryomyces hansenii IPF 7393.1
YALI1_E39385g	Compare to YALI0E33253g, similar to uniprot|P17891 Saccharomyces cerevisiae YGR167w CLC1 clathrin light chain singleton, similar to Saccharomyces cerevisiae CLC1 (YGR167W); ancestral locus Anc_5.168
YALI1_E39395g	Compare to YALI0E33275g, similar to uniprot|P53178 Saccharomyces cerevisiae YGL047w Hypothetical 22.7 kDa protein in SUG1-RNA15 intergenic region, similar to Saccharomyces cerevisiae ALG13 (YGL047W); ancestral locus Anc_4.58
YALI1_E39414g	Compare to YALI0E33297g, similar to uniprot|Q873I9 Neurospora crassa related to pirin
YALI1_E39433g	Compare to YALI0E33319g, weakly similar to uniprot|Q7S6Y5 Neurospora crassa NCU05578.1 predicted protein
YALI1_E39439g	Compare to YALI0E33341g, weakly similar to uniprot|Q09834 Schizosaccharomyces pombe Putative mitochondrial carrier C4G8.08
YALI1_E39466g	Compare to YALI0E33363g, similar to uniprot|Q92389 Yarrowia lipolytica AXP1 Acid extracellular protease precursor
YALI1_E39500t	Compare to YALI0E33377g, similar to uniprot|P38859 Saccharomyces cerevisiae YHR164c DNA2 DNA replication helicase, similar to Saccharomyces cerevisiae ECM32 (YER176W); ancestral locus Anc_8.242
YALI1_E39553g	Compare to YALI0E33385g, no similarity
YALI1_E39570g	Compare to YALI0E33407g, similar to uniprot|P32621 Saccharomyces cerevisiae YEL042w GDA1 guanosine diphosphatase P2.423.f2.1, similar to Saccharomyces cerevisiae GDA1 (YEL042W); ancestral locus Anc_1.485
YALI1_E39579g	Compare to YALI0E33429g, weakly similar to YG59_METJA uniprot|Q59053 Methanococcus jannaschii Hypothetical ATP-binding protein MJ1659
YALI1_E39618g	Compare to YALI0E33451g, weakly similar to uniprot|P36041 Saccharomyces cerevisiae YKL204w EAP1 translation initiation factor 4E- associated protein singleton
YALI1_E39656g	Compare to YALI0E33473g, similar to uniprot|P25618 Saccharomyces cerevisiae YCR017c Hypothetical 107.9 kDa protein in POL4-SRD1 intergenic region putative sensor/transporter protein singleton, similar to Saccharomyces cerevisiae CWH43 (YCR017C); ancestral locus Anc_1.434
YALI1_E39676g	Compare to YALI0E33495g, highly similar to uniprot|CAD71242 Neurospora crassa B11H7.020 Probable arsenite translocating ATPase, similar to Saccharomyces cerevisiae GET3 (YDL100C); ancestral locus Anc_2.355
YALI1_E39693g	Compare to YALI0E33517g, similar to Saccharomyces cerevisiae KGD1 (YIL125W); ancestral locus Anc_2.237, highly similar to uniprot|P20967 Saccharomyces cerevisiae YIL125w KGD1 2-oxoglutarate dehydrogenase complex E1 component singleton
YALI1_E39796g	Compare to YALI0E33539g, similar to Saccharomyces cerevisiae SIM1 (YIL123W) and SUN4 (YNL066W); ancestral locus Anc_2.239, similar to uniprot|P53616 Saccharomyces cerevisiae YNL066w SUN4
YALI1_E39820g	Compare to YALI0E33561g, no similarity
YALI1_E39848g	Compare to YALI0E33583g, similar to uniprot|P33413 Saccharomyces cerevisiae YHL016c DUR3 urea transport protein singleton
YALI1_E39862g	Compare to YALI0E33605g, no similarity
YALI1_E39886g	Compare to YALI0E33627g, uniprot|Q7Z8R5 Yarrowia lipolytica Rim9/PalI protein involved in pH sensing mating and meiosis
YALI1_E39924g	Compare to YALI0E33649g, highly similar to uniprot|P39958 Saccharomyces cerevisiae YER136w GDI1 GDP dissociation inhibitor P2.83. f2.1, similar to Saccharomyces cerevisiae GDI1 (YER136W); ancestral locus Anc_8.175
YALI1_E39934g	Compare to YALI0E33671g, similar to Saccharomyces cerevisiae YDR061W; ancestral locus Anc_8.176, similar to uniprot|Q12298 Saccharomyces cerevisiae YDR061W Putative membrane protein
YALI1_E39955g	Compare to YALI0E33693g, similar to Saccharomyces cerevisiae YDR063W; ancestral locus Anc_8.178, similar to uniprot|Q12156 Saccharomyces cerevisiae YDR063w
YALI1_E39983g	Compare to YALI0E33715g, weakly similar to uniprot|P08640 Saccharomyces cerevisiae YIR019c STA1 extracellular alpha-1 4-glucan glucosidase P2.341.f2.1
YALI1_E39990g	Truncated form of YALI0E33737g, weakly similar to CA2714|CaIFF2 Candida albicans CaIFF2
YALI1_E40032g	Compare to YALI0E33759g, similar to Saccharomyces cerevisiae SEC8 (YPR055W); ancestral locus Anc_3.340, weakly similar to uniprot|P32855 Saccharomyces cerevisiae YPR055w SEC8 protein transport protein singleton
YALI1_E40076g	Compare to YALI0E33774g, similar to uniprot|P22219 Saccharomyces cerevisiae YBR097w VPS15 ser/thr protein kinase, similar to Saccharomyces cerevisiae VPS15 (YBR097W); ancestral locus Anc_3.339
YALI1_E40089g	Compare to YALI0E33803g, similar to Saccharomyces cerevisiae AKL1 (YBR059C); ancestral locus Anc_3.273, similar to uniprot|Q00772 Saccharomyces cerevisiae YHR030c SLT2 ser/thr protein kinase of MAP kinase family P108.1.f12.1
YALI1_E40097g	Compare to YALI0E33825g, weakly similar to wi|NCU04826.1 Neurospora crassa NCU04826.1
YALI1_E40144g	Compare to YALI0E33847g, similar to uniprot|O59800 Schizosaccharomyces pombe Cell cycle control protein cwf5, similar to Saccharomyces cerevisiae ECM2 (YBR065C); ancestral locus Anc_3.280
YALI1_E40161g	Compare to YALI0E33869g, similar to DEHA0F07568g Debaryomyces hansenii IPF 8525.1, similar to Saccharomyces cerevisiae YBR062C; ancestral locus Anc_3.279
YALI1_E40251g	Compare to YALI0E33913g, no similarity hypoithetical start
YALI1_E40282g	Compare to YALI0E33935g, weakly similar to KLLA0F16709g Kluyveromyces lactis
YALI1_E40305g	Compare to YALI0E33957g, similar to uniprot|P06633 Saccharomyces cerevisiae YOR202w HIS3 imidazoleglycerol-phosphate dehydratase singleton, similar to Saccharomyces cerevisiae HIS3 (YOR202W); ancestral locus Anc_8.612
YALI1_E40324g	Compare to YALI0E33979g, no similarity, similar to Saccharomyces cerevisiae MRP51 (YPL118W); ancestral locus Anc_8.613
YALI1_E40327g	Compare to YALI0E34001g, some similarities with uniprot|P38692 Saccharomyces cerevisiae YHR102w NRK1 ser/thr protein kinase that interacts with CDC31P P108.1.f6.1, similar to Saccharomyces cerevisiae SPS1 (YDR523C); ancestral locus Anc_1.24
YALI1_E40361g	Compare to YALI0E34037g, similar to uniprot|P00128 Saccharomyces cerevisiae YDR529c QCR7 ubiquinol--cytochrome-c reductase subunit 7, similar to Saccharomyces cerevisiae QCR7 (YDR529C); ancestral locus Anc_1.16
YALI1_E40394g	Compare to YALI0E34045g, similar to uniprot|Q8X8M5 Escherichia coli Orf hypothetical protein
YALI1_E40422g	Compare to YALI0E34067g, some similarities with uniprot|P22209 Saccharomyces cerevisiae YAR018c KIN3 ser/thr protein kinase
YALI1_E40442g	Truncated form of YALI0E34089g, weakly similar to DEHA0F06314g Debaryomyces hansenii IPF 8616.1
YALI1_E40467g	Compare to YALI0E34111g, similar to Saccharomyces cerevisiae CMD1 (YBR109C); ancestral locus Anc_3.360, similar to uniprot|P06787 Saccharomyces cerevisiae YBR109c CMD1 calmodulin
YALI1_E40471g	Compare to YALI0E34133g, similar to Saccharomyces cerevisiae ALG1 (YBR110W); ancestral locus Anc_3.361, similar to uniprot|P16661 Saccharomyces cerevisiae YBR110w ALG1 beta-mannosyltransferase singleton
YALI1_E40502g	Compare to YALI0E34155g, some similarities with uniprot|P38081 Saccharomyces cerevisiae YBR056w similarity to glucan 1 3-beta- glucosidase singleton
YALI1_E40540g	Compare to YALI0E34170g, similar to Saccharomyces cerevisiae ARP3 (YJR065C); ancestral locus Anc_1.514, highly similar to uniprot|P47117 Saccharomyces cerevisiae YJR065C ARP3 Actin-like protein
YALI1_E40571g	Compare to YALI0E34199g, weakly similar to DEHA0F17446g Debaryomyces hansenii IPF 7719.1, similar to Saccharomyces cerevisiae YJR054W and PRM6 (YML047C); ancestral locus Anc_1.495
YALI1_E40603g	Compare to YALI0E34221g, weakly similar to uniprot|O59806 Schizosaccharomyces pombe Hypothetical 28.3 kDa protein
YALI1_E40640g	Compare to YALI0E34243g, similar to Saccharomyces cerevisiae YOR012W; ancestral locus Anc_7.105, similar to uniprot|O59806 Schizosaccharomyces pombe Hypothetical 28.3 kDa protein
YALI1_E40671g	Compare to YALI0E34265g, similar to uniprot|P06115 Saccharomyces cerevisiae YGR088w CTT1 catalase T cytosolic P2.391.f2.1
YALI1_E40691g	Compare to YALI0E34287g, similar to Saccharomyces cerevisiae NIP7 (YPL211W); ancestral locus Anc_6.225, uniprot|Q6H9R8 Yarrowia lipolytica Putative Nip7 protein highly similar to uniprot|Q08962 Saccharomyces cerevisiae YPL211w NIP7 required for efficient 60S ribosome subunit biogenesis
YALI1_E40718g	Compare to YALI0E34309g, similar to Saccharomyces cerevisiae SRP72 (YPL210C); ancestral locus Anc_6.224, uniprot|Q6H9R9 Yarrowia lipolytica weakly similar to uniprot|P38688 Saccharomyces cerevisiae YPL210c SRP72 signal recognition particle protein singleton
YALI1_E40744g	Compare to YALI0E34331g, weakly similar to uniprot|Q06325 Saccharomyces cerevisiae YDR349C, similar to Saccharomyces cerevisiae YPS7 (YDR349C); ancestral locus Anc_5.401
YALI1_E40754g	Compare to YALI0E34353g, similar to uniprot|P53166 Saccharomyces cerevisiae YGL064c MRH4 Mitochondrial ATP-dependent RNA helicase of the DEAD-box family, similar to Saccharomyces cerevisiae MRH4 (YGL064C); ancestral locus Anc_6.223
YALI1_E40782g	Compare to YALI0E34375g, similar to uniprot|P38991 Saccharomyces cerevisiae YPL209c IPL1 ser/thr protein kinase P108.1.f16.1, similar to Saccharomyces cerevisiae IPL1 (YPL209C); ancestral locus Anc_6.222
YALI1_E40785g	Compare to YALI0E34397g, weakly similar to CAGL0E05698g Candida glabrata, similar to Saccharomyces cerevisiae RKM1 (YPL208W); ancestral locus Anc_6.221
YALI1_E40811g	Compare to YALI0E34419g, no similarity
YALI1_E40818g	Compare to YALI0E34441g, no similarity
YALI1_E40864g	Compare to YALI0E34463g, some similarities with wi|NCU06697.1 Neurospora crassa NCU06697.1 hypothetical protein (67439 - 69758)
YALI1_E40915g	Compare to YALI0E34485g, weakly similar to DEHA0D03289g Debaryomyces hansenii IPF 10385.1
YALI1_E40970g	Compare to YALI0E34507g, weakly similar to uniprot|Q9P8F7 Yarrowia lipolytica Triacylglycerol lipase precursor (EC 3.1.1.3)
YALI1_E40995g	Compare to YALI0E34529g, weakly similar to uniprot|Q7ZVT8 Danio rerio Similar to COP9 constitutive photomorph
YALI1_E41014g	Compare to YALI0E34540g, similar to Saccharomyces cerevisiae COX19 (YLL018C-A); ancestral locus Anc_4.43,gnl|GLV|YALI0E34540g [Yarrowia lipolytica] similar to uniprot|Q3E731 Saccharomyces cerevisiae YLL018C-A COX19
YALI1_E41057g	Compare to YALI0E34551g, similar to uniprot|Q9P424 Ajellomyces capsulata Putative calcium transporting ATPase
YALI1_E41061g	Compare to YALI0E34573g, highly similar to uniprot|P49631 Saccharomyces cerevisiae YPR043w RPL43A and highly similar to uniprot|P49631 Saccharomyces cerevisiae YJR094W-A RPL43B Ribosomal Protein of the Large subunit, similar to Saccharomyces cerevisiae RPL43B (YJR094W-A) and RPL43A (YPR043W); ancestral locus Anc_7.466
YALI1_E41110g	Compare to YALI0E34650g, weakly similar to uniprot|O94400 Schizosaccharomyces pombe Putative PHD-type zinc finger, similar to Saccharomyces cerevisiae ASR1 (YPR093C); ancestral locus Anc_3.405
YALI1_E41148g	Compare to YALI0E34672g, similar to uniprot|P33303 Saccharomyces cerevisiae YJR095w ACR1 succinate-fumarate transporter P33.2.f7.1
YALI1_E41185g	Compare to YALI0E34687g, similar to uniprot|P53250 Saccharomyces cerevisiae YGR080w TWF1 twinfilin an actin monomer sequestering protein, similar to Saccharomyces cerevisiae TWF1 (YGR080W); ancestral locus Anc_3.404
YALI1_E41206g	Compare to YALI0E34727g, weakly similar to uniprot|P07866 Saccharomyces cerevisiae YAL024c LTE1 GDP/GTP exchange factor, similar to Saccharomyces cerevisiae LTE1 (YAL024C); ancestral locus Anc_7.74
YALI1_E41251g	Compare to YALI0E34749g, similar to uniprot|P06115 Saccharomyces cerevisiae YGR088w CTT1 catalase T cytosolic
YALI1_E41276g	Compare to YALI0E34771g, weakly similar to uniprot|P22580 Saccharomyces cerevisiae YDR242w AMD2 amidase
YALI1_E41315g	Compare to YALI0E34793g, highly similar to uniprot|Q8X097 Neurospora crassa Probable ATP citrate lyase subunit 1
YALI1_E41325g	Compare to YALI0E34815g, similar to Saccharomyces cerevisiae YOR022C; ancestral locus Anc_5.604, some similarities with uniprot|Q8X0B7 Neurospora crassa Related to phosphatidic acid-preferring phospholipase A1 no start
YALI1_E41367g	Compare to YALI0E34826g, similar to Saccharomyces cerevisiae RPS27B (YHR021C) and RPS27A (YKL156W); ancestral locus Anc_5.265,gnl|GLV|YALI0E34826g [Yarrowia lipolytica] similar to uniprot|P38711 Saccharomyces cerevisiae YHR021c R27B 40S ribosomal protein S27-B
YALI1_E41393g	Compare to YALI0E34837g, no similarity
YALI1_E41399g	Compare to YALI0E34852g, similar to uniprot|P32803 Saccharomyces cerevisiae YGL200c EMP24 component of the COPII-coated vesicles
YALI1_E41421g	Compare to YALI0E34881g, similar to DEHA0F24211g Debaryomyces hansenii IPF 6233.1
YALI1_E41436g	Compare to YALI0E34903g, similar to uniprot|P53918 Saccharomyces cerevisiae YNL125c ESBP6
YALI1_E41514g	Compare to YALI0E34925g, some similarities with uniprot|Q9C2Q2 Neurospora crassa Related to transcription activator a
YALI1_E41569g	Compare to YALI0E34947g, similar to Saccharomyces cerevisiae YNL217W; ancestral locus Anc_2.28, similar to CA4307|IPF20013 Candida albicans IPF20013 Unknown function
YALI1_E41610g	Compare to YALI0E35024g, similar to uniprot|P25338 Saccharomyces cerevisiae YGL010w Hypothetical 20.2 kDa protein in PRS2-LEU1 intergenic region, similar to Saccharomyces cerevisiae YGL010W; ancestral locus Anc_4.109
YALI1_E41647g	Truncated form of YALI0E35046g, highly similar to uniprot|P22202 Saccharomyces cerevisiae YER103w SSA4 heat shock protein of HSP70 family cytosolic P14.1.f13.1
YALI1_E41699g	Compare to YALI0E35112g, weakly similar to Candida albicans|CA0397|CaFRE31 Ferric reductase (by homology)
YALI1_E41754g	Compare to YALI0E35156g, similar to uniprot|P32528 Saccharomyces cerevisiae YBR208c DUR1_2 urea amidolyase P6.9.f5.1
YALI1_E41850g	Compare to YALI0E35200g, similar to uniprot|P39709 Saccharomyces cerevisiae YAL067c SEO1 suppressor of sulfoxyde ethionine resistance
YALI1_E41893g	Compare to YALI0E35222g, similar to uniprot|P08540 Kluyveromyces lactis Potential acid phosphatase (EC 3.1.3.2)
YALI1_F00140g	Compare to YALI0F00110g, no similarity possibly noncoding
YALI1_F00155g	Compare to YALI0F00132g, weakly similar to uniprot|Q12161 Saccharomyces cerevisiae YOL054W
YALI1_F00184g	Compare to YALI0F00154g, similar to uniprot|O13396 Neurospora crassa MSH-2 DNA mismatch repair protein MSH2
YALI1_F00207g	Compare to YALI0F00176g, similar to DEHA0G03828g Debaryomyces hansenii IPF 785.1 and uniprot|P20107 Saccharomyces cerevisiae YMR243c ZRC1 zinc- and cadmium resistance protein, similar to Saccharomyces cerevisiae ZRC1 (YMR243C) and COT1 (YOR316C); ancestral locus Anc_8.792
YALI1_F00229g	Compare to YALI0F00198g, similar to uniprot|Q08951 Saccharomyces cerevisiae ORF YPL195W Alpha/gamma adaptin, similar to Saccharomyces cerevisiae APL5 (YPL195W); ancestral locus Anc_6.201
YALI1_F00261g	Compare to YALI0F00220g, no similarity
YALI1_F00286g	Compare to YALI0F00242g, weakly similar to DEHA0G02002g Debaryomyces hansenii IPF 937.1
YALI1_F00288g	Compare to YALI0F00264g, similar to Saccharomyces cerevisiae YGL080W; ancestral locus Anc_6.199, similar to wi|NCU08794.1 Neurospora crassa NCU08794. 1 hypothetical protein
YALI1_F00307g	Compare to YALI0F00286g, similar to DEHA0E09625g Debaryomyces hansenii IPF 12157.1, similar to Saccharomyces cerevisiae SKI3 (YPR189W); ancestral locus Anc_7.546
YALI1_F00366g	Compare to YALI0F00308g, some similarities with uniprot|O40947 Kaposi s sarcoma- associated herpesvirus ORF 73
YALI1_F00399g	Compare to YALI0F00330g, some similarities with uniprot|P08640 Saccharomyces cerevisiae YIR019c STA1 extracellular alpha-1 4-glucan glucosidase
YALI1_F00430g	Compare to YALI0F00352g, no similarity
YALI1_F00436g	Compare to YALI0F00374g, similar to uniprot|P02309 Saccharomyces cerevisiae YNL030w HHF2 histone H4 and similar to uniprot|P02309 Saccharomyces cerevisiae YBR009c HHF1 histone H4
YALI1_F00472g	Compare to YALI0F00396g, similar to uniprot|Q10740 Saccharomyces cerevisiae YNL045w, similar to Saccharomyces cerevisiae YNL045W; ancestral locus Anc_2.268
YALI1_F00504g	Compare to YALI0F00418g, similar to uniprot|Q09834 Schizosaccharomyces pombe SPAC4G8.08 Putative mitochondrial carrier
YALI1_F00534g	Compare to YALI0F00440g, no similarity
YALI1_F00616g	Compare to YALI0F00462g, similar to uniprot|O43315 Homo sapiens Aquaporin 9 (Small solute channel 1), similar to Saccharomyces cerevisiae FPS1 (YLL043W); ancestral locus Anc_4.10
YALI1_F00654g	Compare to YALI0F00484g, similar to uniprot|Q63060 Rattus norvegicus Glycerol kinase (EC 2.7.1.30), similar to Saccharomyces cerevisiae GUT1 (YHL032C); ancestral locus Anc_4.9
YALI1_F00821g	Compare to YALI0F00506g, similar to Saccharomyces cerevisiae GLN1 (YPR035W); ancestral locus Anc_7.449, highly similar to uniprot|P32288 Saccharomyces cerevisiae YPR035w GLN1 glutamate--ammonia ligase and DEHA0G20317g Debaryomyces hansenii IPF 5106.1
YALI1_F00866g	Compare to YALI0F00528g, no similarity
YALI1_F00894g	Compare to YALI0F00550g, some similarities with uniprot|O13431 Candida albicans Serine/threonine kinase, no similarity
YALI1_F00976g	Compare to YALI0F00594g, no similarity
YALI1_F00996g	Compare to YALI0F00616g, no similarity possibly noncoding
YALI1_F01020g	Compare to YALI0F00638g, similar to Saccharomyces cerevisiae BRE5 (YNR051C); ancestral locus Anc_6.378, weakly similar to uniprot|P53741 Saccharomyces cerevisiae YNR051c (BRE5)
YALI1_F01034g	Compare to YALI0F00660g, similar to Saccharomyces cerevisiae CUS2 (YNL286W); ancestral locus Anc_3.74, weakly similar to uniprot|P53830 Saccharomyces cerevisiae YNL286w (CUS2) cold sensitive U2 snRNA Suppressor
YALI1_F01078g	Compare to YALI0F00682g, similar to uniprot|Q04432 Saccharomyces cerevisiae YDR533c hypothetical protein and CAGL0C00275g Candida glabrata and KLLA0D00704g Kluyveromyces lactis or KLLA0D00682g Kluyveromyces lactis
YALI1_F01132g	Compare to YALI0F00704g, no similarity
YALI1_F01157g	Compare to YALI0F00726g, some similarities with KLLA-IPF4552.1 Kluyveromyces lactis
YALI1_F01172g	Converted to coding from non-coding YALI0F00748g, uniprot|P45817 Peroxisomal protein PAY2 (Peroxin-9) exon frameshift
YALI1_F01234g	Compare to YALI0F00770g, similar to Saccharomyces cerevisiae HOS4 (YIL112W); ancestral locus Anc_2.257, weakly similar to uniprot|P40480 Saccharomyces cerevisiae YIL112w
YALI1_F01248g	Compare to YALI0F00792g, weakly similar to uniprot|P32857 Saccharomyces cerevisiae YKL039w PTM1 member of the major facilitator superfamily
YALI1_F01275g	Compare to YALI0F00814g, similar to uniprot|O94023 Candida albicans Hypothetical 14.4 kDa protein
YALI1_F01291g	Compare to YALI0F00836g, similar to Saccharomyces cerevisiae TPD3 (YAL016W); ancestral locus Anc_7.88, similar to uniprot|P31383 Saccharomyces cerevisiae YAL016w TPD3 ser/thr protein phosphatase 2A regulatory chain A
YALI1_F01346g	Compare to YALI0F00858g, similar to Saccharomyces cerevisiae SDP1 (YIL113W) and MSG5 (YNL053W); ancestral locus Anc_2.256, weakly similar to uniprot|P38590 Saccharomyces cerevisiae YNL053w MSG5 dual-specifity protein phosphatase
YALI1_F01405g	Truncated form of YALI0F00880g, similar to uniprot|P25491 Saccharomyces cerevisiae YNL064c YDJ1 mitochondrial and ER import protein
YALI1_F01430g	Compare to YALI0F00902g, weakly similar to uniprot|P40470 Saccharomyces cerevisiae YIL127c
YALI1_F01456g	Compare to YALI0F00924g, uniprot|Q9UUT8 Yarrowia lipolytica Subunit NUIM of protein NADH:ubiquinone oxidoreductase (Complex I) (EC 1.6. 99.3)
YALI1_F01486g	Compare to YALI0F00946g, no similarity
YALI1_F01532g	Compare to YALI0F00968g, some similarities with KLLA0E11957g Kluyveromyces lactis
YALI1_F01614g	Compare to YALI0F00990g, no similarity
YALI1_F01659g	Compare to YALI0F01012g, uniprot|Q99155 Yarrowia lipolytica Peroxisome assembly protein PAY5 (Peroxin-2)
YALI1_F01696g	Compare to YALI0F01034g, similar to Saccharomyces cerevisiae CDC9 (YDL164C); ancestral locus Anc_7.343, similar to KLLA0D12496g Kluyveromyces lactis IPF 4561.1 and uniprot|P04819 Saccharomyces cerevisiae YDL164c CDC9 DNA ligase
YALI1_F01742g	Compare to YALI0F01056g, similar to uniprot|Q09743 Schizosaccharomyces pombe Protein ste16, similar to Saccharomyces cerevisiae TSC11 (YER093C); ancestral locus Anc_7.380
YALI1_F01755g	Compare to YALI0F01078g, similar to uniprot|P32837 Saccharomyces cerevisiae YDL210w GABA-specific permease (GABA-specific transport protein)
YALI1_F01796g	Compare to YALI0F01100g, no similarity
YALI1_F01838g	Compare to YALI0F01122g, similar to Saccharomyces cerevisiae NEO1 (YIL048W); ancestral locus Anc_7.234, similar to uniprot|P40527 Saccharomyces cerevisiae YIL048w Potential phospholipid-transporting ATPase 4 (EC 3. 6.3.1) and KLLA0C08393g Kluyveromyces lactis IPF 6246.1
YALI1_F01849g	Compare to YALI0F01144g, similar to Saccharomyces cerevisiae MED4 (YOR174W); ancestral locus Anc_6.65, uniprot|Q8WZL6 Yarrowia lipolytica Med4 protein transcription regulation mediator
YALI1_F01897g	Compare to YALI0F01166g, similar to wi|NCU09610.1 Neurospora crassa NCU09610. 1 hypothetical protein, similar to Saccharomyces cerevisiae SEY1 (YOR165W); ancestral locus Anc_6.56
YALI1_F01929g	Compare to YALI0F01188g, no similarity
YALI1_F01981g	Compare to YALI0F01210g, similar to CA2873|CaAQY1 Candida albicans CaAQY1 putative plasma membrane and water channel protein
YALI1_F02047g	Compare to YALI0F01232g, similar to uniprot|P31244 Saccharomyces cerevisiae YBR114W DNA repair protein RAD16
YALI1_F02074g	Compare to YALI0F01254g, similar to uniprot|P38971 Saccharomyces cerevisiae YNL270c ALP1 high-affinity permease for basic amino acids
YALI1_F02132g	Compare to YALI0F01320g, uniprot|O74128 Yarrowia lipolytica ALK2 (CytP450 familly)
YALI1_F02187g	Compare to YALI0F01386g, weakly similar to uniprot|P32791 Saccharomyces cerevisiae YLR214w FRE1 ferric (and cupric) reductase
YALI1_F02199g	Compare to YALI0F01408g, some similarities with uniprot|Q88HQ7 Pseudomonas putida YeeE/YedE family protein and uniprot|Q8Y299 Ralstonia solanacearum Probable transmembrane protein
YALI1_F02238g	Compare to YALI0F01430g, similar to uniprot|Q12251 Saccharomyces cerevisiae Hypothetical 35.9 kDa protein YPR011C and DEHA0C17534g Debaryomyces hansenii IPF 3347.1, similar to Saccharomyces cerevisiae YPR011C; ancestral locus Anc_8.115
YALI1_F02265g	Compare to YALI0F01452g, no similarity
YALI1_F02289g	similar to Saccharomyces cerevisiae YPR010C-A; ancestral locus Anc_8.114
YALI1_F02299g	Compare to YALI0F01474g, no similarity
YALI1_F02309g	Compare to YALI0F01496g, similar to uniprot|P22803 Saccharomyces cerevisiae YGR209c TRX2 thioredoxin II
YALI1_F02378g	Compare to YALI0F01518g, some similarities with uniprot|Q6CF33 Yarrowia lipolytica YALI0B10626g
YALI1_F02403g	Compare to YALI0F01540g, no similarity
YALI1_F02434g	Compare to YALI0F01562g, weakly similar to uniprot|Q9P3I4 Neurospora crassa Related to pathway-specific nitrogen regulator
YALI1_F02481g	Compare to YALI0F01584g, similar to uniprot|Q9RJR2 Streptomyces coelicolor Putative triosephosphate isomerase
YALI1_F02508g	Compare to YALI0F01606g, similar to uniprot|O13902 Schizosaccharomyces pombe Dihydroxyacetone kinase 1 DAK1 (DHA kinase 1)
YALI1_F02518g	Compare to YALI0F01628g, similar to DEHA-IPF7297.1 Debaryomyces hansenii
YALI1_F02545g	Compare to YALI0F01650g, weakly similar to uniprot|P32573 Saccharomyces cerevisiae YNL202w SPS19 peroxisomal 2 4-dienoyl-CoA reductase
YALI1_F02592g	Compare to YALI0F01672g, similar to uniprot|P07337 Kluyveromyces marxianus Beta- glucosidase precursor (Gentiobiase) (Cellobiase) and DEHA0B07491g Debaryomyces hansenii IPF 9746.1
YALI1_F02655g	Compare to YALI0F01694g, some similarities with uniprot|P25623 Saccharomyces cerevisiae YCR030c and DEHA0D03916g Debaryomyces hansenii IPF 10442.1, similar to Saccharomyces cerevisiae SYP1 (YCR030C); ancestral locus Anc_1.151
YALI1_F02697g	Compare to YALI0F01716g, uniprot|Q9P860 Yarrowia lipolytica Wee1-like protein mitosis inhibitor protein kinase, similar to Saccharomyces cerevisiae SWE1 (YJL187C); ancestral locus Anc_1.149
YALI1_F02726g	Compare to YALI0F01738g, some similarities with DEHA0D03850g Debaryomyces hansenii IPF 10436.1, similar to Saccharomyces cerevisiae VAC7 (YNL054W); ancestral locus Anc_2.255
YALI1_F02758g	Compare to YALI0F01771g, similar to uniprot|P08525 Saccharomyces cerevisiae YJL166w QCR8 ubiquinol-cytochrome-c reductase chain VIII, similar to Saccharomyces cerevisiae QCR8 (YJL166W); ancestral locus Anc_1.177
YALI1_F02794g	Compare to YALI0F01793g, weakly similar to uniprot|P38217 Saccharomyces cerevisiae YBR017c KAP104 beta-karyopherin, similar to Saccharomyces cerevisiae KAP104 (YBR017C); ancestral locus Anc_3.181
YALI1_F02855g	Compare to YALI0F01815g, similar to Saccharomyces cerevisiae BUD14 (YAR014C); ancestral locus Anc_3.180, some similarities with uniprot|O60132 Schizosaccharomyces pombe SPBC1706.01 SH3 Src homology domain protein
YALI1_F02903g	Compare to YALI0F01837g, similar to DEHA0B08261g Debaryomyces hansenii IPF 9819.1
YALI1_F02939g	Compare to YALI0F01859g, similar to Saccharomyces cerevisiae HRD3 (YLR207W); ancestral locus Anc_7.339, some similarities with wi|NCU02569.1 Neurospora crassa NCU02569.1 hypothetical protein
YALI1_F02942g	Compare to YALI0F01881g, ancestral locus Anc_7.340, no similarity
YALI1_F02983g	Compare to YALI0F01903g, weakly similar to uniprot|P38187 Saccharomyces cerevisiae YBL067c UBP13 ubiquitin carboxyl-terminal hydrolase, similar to Saccharomyces cerevisiae UBP13 (YBL067C) and UBP9 (YER098W); ancestral locus Anc_7.390
YALI1_F03028g	Compare to YALI0F01925g, similar to Saccharomyces cerevisiae SKT5 (YBL061C) and SHC1 (YER096W); ancestral locus Anc_7.386, similar to uniprot|P87065 Candida albicans Chitin synthase regulatory factor
YALI1_F03075g	Compare to YALI0F01947g, no similarity
YALI1_F03118g	Compare to YALI0F01969g, similar to Saccharomyces cerevisiae PRP24 (YMR268C); ancestral locus Anc_8.822, some similarities with uniprot|P49960 Saccharomyces cerevisiae YMR268c PRP24 pre-mRNA splicing factor probable RNA-binding protein
YALI1_F03120g	Compare to YALI0F01991g, similar to Saccharomyces cerevisiae TMA23 (YMR269W); ancestral locus Anc_8.823, similar to DEHA0F08272g Debaryomyces hansenii IPF 8480.1
YALI1_F03136g	Compare to YALI0F02013g, similar to uniprot|O14295 Schizosaccharomyces pombe SPAC9E9.11 Pyridoxal reductase
YALI1_F03153g	Compare to YALI0F02035g, some similarities with uniprot|Q01846 Saccharomyces cerevisiae YML104c MDM1 intermediate filament protein, similar to Saccharomyces cerevisiae MDM1 (YML104C); ancestral locus Anc_8.824
YALI1_F03215g	Compare to YALI0F02046g, gnl|GLV|YALI0F02046g [Yarrowia lipolytica] weakly similar to uniprot|Q2U4N1 Aspergillus oryzae
YALI1_F03269g	Compare to YALI0F02057g, no similarity
YALI1_F03337g	Compare to YALI0F02079g, no similarity
YALI1_F03356g	Compare to YALI0F02101g, weakly similar to uniprot|P34909 Saccharomyces cerevisiae YER068w MOT2 transcriptional repressor, similar to Saccharomyces cerevisiae MOT2 (YER068W); ancestral locus Anc_7.249
YALI1_F03371g	Compare to YALI0F02123g, uniprot|Q9UUU0 Yarrowia lipolytica NUGM protein precursor
YALI1_F03389g	Compare to YALI0F02145g, weakly similar to uniprot|P39013 Saccharomyces cerevisiae YNL084c END3 required for endocytosis and cytoskeletal organization, similar to Saccharomyces cerevisiae END3 (YNL084C); ancestral locus Anc_2.207
YALI1_F03407g	Compare to YALI0F02167g, highly similar to CA6093|CaARF22 Candida albicans CaARF22 or CA5095|CaARF21 Candida albicans CaARF21
YALI1_F03428g	Compare to YALI0F02189g, similar to Saccharomyces cerevisiae ERV29 (YGR284C); ancestral locus Anc_5.5, similar to uniprot|P53337 Saccharomyces cerevisiae YGR284c : Hypothetical 35.0 kDa protein and DEHA0G19327g Debaryomyces hansenii IPF 5185.1
YALI1_F03452g	Compare to YALI0F02211g, some similarities with uniprot|P50166 Candida tropicalis ARD gene coding D-arabinitol 2-dehydrogenase (ribulose forming)
YALI1_F03461g	Compare to YALI0F02233g, similar to Saccharomyces cerevisiae GLC8 (YMR311C); ancestral locus Anc_5.6, similar to uniprot|P41818 Saccharomyces cerevisiae YMR311c GLC8 regulatory subunit for protein ser/thr phosphatase GLC7P
YALI1_F03481g	Compare to YALI0F02255g, no similarity, similar to Saccharomyces cerevisiae MPM1 (YJL066C); ancestral locus Anc_1.310
YALI1_F03494g	Compare to YALI0F02277g, similar to wi|NCU06713.1 Neurospora crassa NCU06713. 1 hypothetical protein, similar to Saccharomyces cerevisiae VPS55 (YJR044C); ancestral locus Anc_1.473
YALI1_F03527g	Compare to YALI0F02299g, similar to uniprot|P11325 Saccharomyces cerevisiae YLR382c NAM2 leucine--tRNA ligase precursor mitochondrial, similar to Saccharomyces cerevisiae NAM2 (YLR382C); ancestral locus Anc_4.236
YALI1_F03529g	Compare to YALI0F02321g, similar to uniprot|Q04121 Saccharomyces cerevisiae YDR456w NHX1 NA+-H+ antiporter, similar to Saccharomyces cerevisiae NHX1 (YDR456W); ancestral locus Anc_5.573
YALI1_F03573g	Compare to YALI0F02343g, weakly similar to uniprot|O42970 Schizosaccharomyces pombe SPBC1E8.05 Serine rich protein
YALI1_F03604g	Compare to YALI0F02365g, similar to Saccharomyces cerevisiae SMC6 (YLR383W); ancestral locus Anc_4.237, weakly similar to uniprot|P53692 Schizosaccharomyces pombe DNA repair protein rad18
YALI1_F03693g	Compare to YALI0F02387g, similar to Saccharomyces cerevisiae USO1 (YDL058W); ancestral locus Anc_4.238, similar to DEHA0C09658g Debaryomyces hansenii IPF 1836.1
YALI1_F03722g	Compare to YALI0F02409g, similar to Saccharomyces cerevisiae NDC1 (YML031W); ancestral locus Anc_5.574, weakly similar to uniprot|O13961 Schizosaccharomyces pombe SPAC1786.03 Nuclear envelope protein cut11
YALI1_F03735g	Compare to YALI0F02431g, similar to Saccharomyces cerevisiae RAD52 (YML032C); ancestral locus Anc_5.575, weakly similar to uniprot|P06778 Saccharomyces cerevisiae YML032c RAD52 recombination and DNA repair protein
YALI1_F03765g	Compare to YALI0F02453g, similar to Saccharomyces cerevisiae SUP45 (YBR143C); ancestral locus Anc_3.121, highly similar to uniprot|P12385 Saccharomyces cerevisiae YBR143c SUP45 translational release factor
YALI1_F03778g	Compare to YALI0F02475g, similar to uniprot|P25656 Saccharomyces cerevisiae YCR094w CDC50 cell division cycle mutant or uniprot|P53740 Saccharomyces cerevisiae YNR048w or uniprot|P42838 Saccharomyces cerevisiae YNL323w
YALI1_F03803g	Compare to YALI0F02497g, similar to Saccharomyces cerevisiae PDH1 (YPR002W); ancestral locus Anc_8.93, similar to uniprot|Q12428 Saccharomyces cerevisiae YPR002W Hypothetical 57.7 kDa protein in CIT3-HAL1 intergenic region
YALI1_F03830g	Converted to coding from non-coding YALI0F02519g, weakly similar to uniprot|Q12068 Saccharomyces cerevisiae YOL151w GRE2
YALI1_F03842g	Compare to YALI0F02563g, similar to uniprot|P21734 Saccharomyces cerevisiae YDR177w UBC1 E2 ubiquitin-conjugating enzyme
YALI1_F03855g	Compare to YALI0F02585g, similar to uniprot|P40327 Saccharomyces cerevisiae YDL007w YTA5 26S proteasome regulatory subunit
YALI1_F03883g	Compare to YALI0F02607g, similar to uniprot|Q9C1L3 Neurospora crassa Putative 3- hydroxyisobutyrate dehydrogenase G6G8.5.
YALI1_F03908g	Compare to YALI0F02629g, similar to Saccharomyces cerevisiae SES1 (YDR023W); ancestral locus Anc_3.251, highly similar to uniprot|P07284 Saccharomyces cerevisiae YDR023w SES1 seryl-tRNA synthetase cytosolic
YALI1_F03909g	Compare to YALI0F02651g, similar to Saccharomyces cerevisiae CIS1 (YDR022C); ancestral locus Anc_3.250, no similarity
YALI1_F03948g	Compare to YALI0F02673g, weakly similar to uniprot|P28742 Saccharomyces cerevisiae YBL063w KIP1 kinesin-related protein
YALI1_F03973g	Compare to YALI0F02695g, similar to Saccharomyces cerevisiae FAL1 (YDR021W); ancestral locus Anc_3.249, highly similar to wi|NCU01234.1 Neurospora crassa NCU01234.1 probable translation initiation factor eIF-4A
YALI1_F03974g	Compare to YALI0F02717g, weakly similar to uniprot|Q12084 Saccharomyces cerevisiae YDR020c, similar to Saccharomyces cerevisiae YDR020C; ancestral locus Anc_3.248
YALI1_F03992g	Compare to YALI0F02739g, weakly similar to uniprot|P38256 Saccharomyces cerevisiae YBR096w
YALI1_F04001g	Compare to YALI0F02761g, weakly similar to uniprot|Q9P7X3 Schizosaccharomyces pombe Hypothetical protein P23A10.12 in chromosome II
YALI1_F04027g	Compare to YALI0F02783g, weakly similar to uniprot|P39923 Saccharomyces cerevisiae YEL062w NPR2 nitrogen permease regulator, similar to Saccharomyces cerevisiae NPR2 (YEL062W); ancestral locus Anc_6.17
YALI1_F04045g	Compare to YALI0F02805g, similar to Saccharomyces cerevisiae TCM62 (YBR044C); ancestral locus Anc_3.247, highly similar to uniprot|P19882 Saccharomyces cerevisiae YLR259c HSP60 heat shock protein - chaperone mitochondrial
YALI1_F04070g	Compare to YALI0F02827g, similar to uniprot|Q12692 Saccharomyces cerevisiae YOL012c HTZ1 evolutionarily conserved member of the histone H2A F/Z family of histone variants
YALI1_F04082g	Compare to YALI0F02849g, similar to Saccharomyces cerevisiae GCV1 (YDR019C); ancestral locus Anc_3.246, similar to uniprot|P48015 Saccharomyces cerevisiae YDR019c GCV1 glycine decarboxylase
YALI1_F04106g	Compare to YALI0F02871g, some similarities with DEHA0E06479g Debaryomyces hansenii IPF 5342.1 and uniprot|Q9P7W0 Schizosaccharomyces pombe SPBC1703.11 Putative OPA3-like protein,ancestral locus Anc_6.44
YALI1_F04110g	Compare to YALI0F02893g, similar to uniprot|P38077 Saccharomyces cerevisiae YBR039w ATP3 F1F0-ATPase complex F1 gamma subunit, similar to Saccharomyces cerevisiae ATP3 (YBR039W); ancestral locus Anc_3.241
YALI1_F04130g	Compare to YALI0F02915g, no similarity
YALI1_F04157g	Compare to YALI0F02937g, similar to Saccharomyces cerevisiae CST26 (YBR042C) and YDR018C; ancestral locus Anc_3.244, similar to uniprot|P38226 Saccharomyces cerevisiae YBR042c
YALI1_F04185g	Compare to YALI0F02959g, similar to Saccharomyces cerevisiae QDR3 (YBR043C); ancestral locus Anc_3.245, similar to uniprot|P38227 Saccharomyces cerevisiae YBR043c
YALI1_F04211g	Compare to YALI0F02981g, similar to Saccharomyces cerevisiae HRD1 (YOL013C); ancestral locus Anc_6.45, uniprot|Q7ZA17 Yarrowia lipolytica Hrd1 protein weakly similar to uniprot|Q08109 Saccharomyces cerevisiae YOL013c HRD1 involved in degradation of HMG2P
YALI1_F04236g	Compare to YALI0F03003g, similar to uniprot|Q7S5T3 Neurospora crassa NCU09779.1 hypothetical protein
YALI1_F04238g	Compare to YALI0F03025g, similar to uniprot|Q871U8 Neurospora crassa NCU06664.1 hypothetical protein 100H1.080 gene
YALI1_F04259g	Compare to YALI0F03047g, similar to Saccharomyces cerevisiae PAM16 (YJL104W); ancestral locus Anc_1.257, weakly similar to KLLA0F13860g Kluyveromyces lactis IPF 986.1
YALI1_F04264g	Compare to YALI0F03069g, similar to Saccharomyces cerevisiae SET4 (YJL105W) and SET3 (YKR029C); ancestral locus Anc_1.256, some similarities with uniprot|P36124 Saccharomyces cerevisiae YKR029c
YALI1_F04314g	Compare to YALI0F03113g, similar to Saccharomyces cerevisiae IME2 (YJL106W); ancestral locus Anc_1.255, some similarities with uniprot|P32581 Saccharomyces cerevisiae YJL106w IME2 ser/thr protein kinase
YALI1_F04345g	Compare to YALI0F03135g, no similarity
YALI1_F04379g	Compare to YALI0F03157g, some similarities with uniprot|Q12041 Saccharomyces cerevisiae YDR253c MET32 transcriptional regulator of sulfur amino acid metabolism
YALI1_F04433g	Compare to YALI0F03179g, highly similar to uniprot|P07251 Saccharomyces cerevisiae YBL099w ATP1 F1F0-ATPase complex F1 alpha subunit, similar to Saccharomyces cerevisiae ATP1 (YBL099W); ancestral locus Anc_7.432
YALI1_F04455g	Compare to YALI0F03201g, similar to Saccharomyces cerevisiae COX13 (YGL191W); ancestral locus Anc_8.151, similar to uniprot|P32799 Saccharomyces cerevisiae YGL191w COX13 cytochrome-c oxidase chain VIa singleton
YALI1_F04497g	Converted to coding from non-coding YALI0F03223g, similar to Saccharomyces cerevisiae CDC55 (YGL190C); ancestral locus Anc_8.150, similar to uniprot|Q00362 Saccharomyces cerevisiae YGL190c CDC55 ser/thr phosphatase 2A regulatory subunit B
YALI1_F04559t	Compare to YALI0F03245g, Full length Line element, uniprot|Q8NIP3 Yarrowia lipolytica Reverse transcriptase
YALI1_F04580t	Compare to YALI0F03256g, Full length Line element, uniprot|Q8NIP4 Yarrowia lipolytica gag-like protein
YALI1_F04590t	Converted to coding from non-coding YALI0F03278g, Partial Line element, uniprot|Q8NIP3 Yarrowia lipolytica Reverse transcriptase 3' end
YALI1_F04594g	Compare to YALI0F03300g, similar to Saccharomyces cerevisiae RPC53 (YDL150W); ancestral locus Anc_7.329, weakly similar to uniprot|P25441 Saccharomyces cerevisiae YDL150w RPC53 DNA-directed RNA polymerase III
YALI1_F04626g	Compare to YALI0F03322g, no similarity
YALI1_F04643g	Compare to YALI0F03344g, highly similar to uniprot|Q92368 Schizosaccharomyces pombe SPAC29B12.06C Cell differentiation protein rcd1, similar to Saccharomyces cerevisiae CAF40 (YNL288W); ancestral locus Anc_3.72
YALI1_F04690g	Compare to YALI0F03366g, some similarities with uniprot|Q9VUB7 Drosophila melanogaster CG32133 protein
YALI1_F04763g	Compare to YALI0F03388g, weakly similar to uniprot|Q9P5L6 Neurospora crassa NCU03905.1 related to AP-1-like transcription factor
YALI1_F04818g	Compare to YALI0F03410g, no similarity
YALI1_F04848g	Compare to YALI0F03432g, weakly similar to uniprot|Q06628 Saccharomyces cerevisiae YPR185w APG13 protein required for the autophagic process, similar to Saccharomyces cerevisiae ATG13 (YPR185W); ancestral locus Anc_7.542
YALI1_F04895g	Compare to YALI0F03454g, similar to uniprot|P32074 Saccharomyces cerevisiae YNL287w SEC21 coatomer complex gamma chain (gamma-COP) of secretory pathway vesicles, similar to Saccharomyces cerevisiae SEC21 (YNL287W); ancestral locus Anc_3.73
YALI1_F04920g	Truncated form of YALI0F03476g, no similarity
YALI1_F04938g	Compare to YALI0F03498g, similar to uniprot|P50276 Saccharomyces cerevisiae YGR055w MUP1 high affinity methionine permease
YALI1_F04980g	Compare to YALI0F03520g, no similarity
YALI1_F05039g	Compare to YALI0F03542g, some similarities with uniprot|Q08217 Saccharomyces cerevisiae YOL045w similarity to ser/thr protein kinase
YALI1_F05089g	Compare to YALI0F03567g, similar to uniprot|P00424 Saccharomyces cerevisiae YNL052w COX5A mitochondrial cytochrome-c oxidase chain V.A precursor, similar to Saccharomyces cerevisiae YGL226W; ancestral locus Anc_3.542
YALI1_F05137g	Compare to YALI0F03575g, weakly similar to uniprot|Q9Y808 Schizosaccharomyces pombe Transcription regulatory protein GAL11
YALI1_F05220g	Compare to YALI0F03597g, similar to Saccharomyces cerevisiae URH1 (YDR400W); ancestral locus Anc_5.492, similar to CAGL0F02585g Candida glabrata and uniprot|Q04179 Saccharomyces cerevisiae YDR400w URH1 uridine ribohydrolase
YALI1_F05253g	Compare to YALI0F03619g, some similarities with uniprot|Q7SG20 Neurospora crassa NCU02600.1 hypothetical protein
YALI1_F05312g	Compare to YALI0F03630g, gnl|GLV|YALI0F03630g [Yarrowia lipolytica] similar to uniprot|P39529 Saccharomyces cerevisiae YJL206C YJU6 putative 86.7 kDa transcriptional regulatory protein
YALI1_F05386g	Compare to YALI0F03641g, similar to Saccharomyces cerevisiae NTG1 (YAL015C) and NTG2 (YOL043C); ancestral locus Anc_7.89, weakly similar to uniprot|Q08214 Saccharomyces cerevisiae YOL043c NTG2 endonuclease III-like glycosylase 2
YALI1_F05415g	Compare to YALI0F03663g, similar to uniprot|Q9Y7G5 Emericella nidulans Phenylacetate 2-hydroxylase
YALI1_F05448g	Compare to YALI0F03685g, no similarity
YALI1_F05459g	Compare to YALI0F03707g, some similarities with uniprot|P36069 Saccharomyces cerevisiae YKL128c PMU1 high copy suppressor of ts TPS2 mutant phenotype
YALI1_F05509g	Compare to YALI0F03751g, weakly similar to uniprot|P40474 Saccharomyces cerevisiae YIL121w similarity to antibiotic resistance proteins
YALI1_F05543t	Partial Line element
YALI1_F05574g	Compare to YALI0F03795g, weakly similar to uniprot|P53389 Saccharomyces cerevisiae YNR055c HOL1 member of major facilitator superfamily multidrug-resistance protein subfamily
YALI1_F05624g	Compare to YALI0F03817g, similar to Saccharomyces cerevisiae YSH1 (YLR277C) and SYC1 (YOR179C); ancestral locus Anc_6.74, similar to uniprot|Q06224 Saccharomyces cerevisiae YLR277c BRR5 component of pre-mRNA polyadenylation factor
YALI1_F05661g	Compare to YALI0F03839g, similar to Saccharomyces cerevisiae SRP54 (YPR088C); ancestral locus Anc_3.395, uniprot|Q99150 Yarrowia lipolytica Signal recognition particle 54 kDa protein
YALI1_F05695g	Compare to YALI0F03861g, no similarity
YALI1_F05781g	Compare to YALI0F03883g, weakly similar to uniprot|Q01329 Saccharomyces cerevisiae YAL043c PTA1 pre-tRNA processing protein / PF I subunit, similar to Saccharomyces cerevisiae PTA1 (YAL043C); ancestral locus Anc_7.28
YALI1_F05814g	Compare to YALI0F03905g, some similarities with uniprot|P06842 Saccharomyces cerevisiae YFL026w STE2 pheromone alpha-factor receptor, similar to Saccharomyces cerevisiae STE2 (YFL026W); ancestral locus Anc_8.45
YALI1_F05871g	Compare to YALI0F03927g, weakly similar to uniprot|P43571 Saccharomyces cerevisiae YFL025c BST1 negative regulator of COPII vesicle formation, similar to Saccharomyces cerevisiae BST1 (YFL025C); ancestral locus Anc_8.46
YALI1_F05936g	Compare to YALI0F03949g, similar to Saccharomyces cerevisiae ZIM17 (YNL310C); ancestral locus Anc_3.36, some similarities with uniprot|P42844 Saccharomyces cerevisiae YNL310c
YALI1_F05958g	Compare to YALI0F03971g, no similarity
YALI1_F05979g	Compare to YALI0F03993g, similar to Saccharomyces cerevisiae RFA2 (YNL312W); ancestral locus Anc_3.33, some similarities with uniprot|P26754 Saccharomyces cerevisiae YNL312w RFA2 DNA replication factor A 36 kDa subunit
YALI1_F06018g	Compare to YALI0F04015g, similar to uniprot|P15496 Saccharomyces cerevisiae YPL117c IDI1 isopentenyl-diphosphate delta-isomerase, similar to Saccharomyces cerevisiae IDI1 (YPL117C); ancestral locus Anc_8.610
YALI1_F06035g	Compare to YALI0F04037g, some similarities with uniprot|P38934 Saccharomyces cerevisiae YOR198c BFR1 maintenance of normal ploidy, similar to Saccharomyces cerevisiae BFR1 (YOR198C); ancestral locus Anc_8.609
YALI1_F06076g	Compare to YALI0F04059g, similar to Saccharomyces cerevisiae MCA1 (YOR197W); ancestral locus Anc_8.608, similar to DEHA0G23474g Debaryomyces hansenii IPF 4877.1
YALI1_F06109g	Compare to YALI0F04081g, weakly similar to uniprot|Q08980 Saccharomyces cerevisiae YPL264c
YALI1_F06197g	Compare to YALI0F04095g, similar to Saccharomyces cerevisiae IDP1 (YDL066W); ancestral locus Anc_4.254, highly similar to uniprot|P41939 Saccharomyces cerevisiae YLR174w IDP2 isocitrate dehydrogenase
YALI1_F06236g	Compare to YALI0F04103g, similar to Saccharomyces cerevisiae COX8 (YLR395C); ancestral locus Anc_4.256, similar to uniprot|P04039 Saccharomyces cerevisiae YLR395c COX8 cytochrome-c oxidase chain VIII
YALI1_F06262g	Compare to YALI0F04125g, weakly similar to uniprot|P20795 Saccharomyces cerevisiae YLR396c VPS33 vacuolar sorting protein, similar to Saccharomyces cerevisiae VPS33 (YLR396C); ancestral locus Anc_4.258
YALI1_F06312g	Compare to YALI0F04147g, similar to uniprot|Q99344 Saccharomyces cerevisiae YPR066w UBA3 ubiquitin-like protein activating enzyme
YALI1_F06351g	Compare to YALI0F04169g, similar to uniprot|P06738 Saccharomyces cerevisiae YPR160w GPH1 glycogen phosphorylase, similar to Saccharomyces cerevisiae GPH1 (YPR160W); ancestral locus Anc_3.510
YALI1_F06393g	Compare to YALI0F04191g, weakly similar to uniprot|P32857 Saccharomyces cerevisiae YKL039w PTM1 member of the major facilitator superfamily
YALI1_F06466g	Compare to YALI0F04213g, similar to Saccharomyces cerevisiae WSC4 (YHL028W); ancestral locus Anc_4.20, emb|Z69781 Yarrowia lipolytica TSR1 gene thermosensitive suppressor of 7SRNA defect involved in the signal recognition particle-dependent translocation pathway of secretory proteins
YALI1_F06544g	Compare to YALI0F04268g, some similarities with uniprot|P38845 Saccharomyces cerevisiae YHR146w Hypothetical 51.1 kDa protein in DCD1- MRPL6 intergenic region, similar to Saccharomyces cerevisiae YIL024C; ancestral locus Anc_7.202
YALI1_F06578g	Compare to YALI0F04290g, similar to uniprot|Q987V4 Rhizobium loti D- aminopeptidase
YALI1_F06628g	Compare to YALI0F04312g, similar to Saccharomyces cerevisiae YKE4 (YIL023C); ancestral locus Anc_7.203, weakly similar to uniprot|P40544 Saccharomyces cerevisiae YIL023c
YALI1_F06670g	Compare to YALI0F04334g, similar to Saccharomyces cerevisiae RSC8 (YFR037C); ancestral locus Anc_7.204, similar to uniprot|P43609 Saccharomyces cerevisiae YFR037c RSC8 subunit of the RSC complex P2.330.f2.1
YALI1_F06708g	Compare to YALI0F04356g, similar to Saccharomyces cerevisiae YFR038W; ancestral locus Anc_7.205, some similarities with uniprot|P43610 Saccharomyces cerevisiae YFR038w
YALI1_F06787g	Compare to YALI0F04378g, similar to Saccharomyces cerevisiae ERG7 (YHR072W); ancestral locus Anc_5.351, similar to uniprot|P38604 Saccharomyces cerevisiae YHR072w ERG7 lanosterol synthase
YALI1_F06797g	Compare to YALI0F04400g, similar to Saccharomyces cerevisiae ERG28 (YER044C); ancestral locus Anc_7.207, similar to uniprot|P40030 Saccharomyces cerevisiae YER044c involved in synthesis of ergosterol
YALI1_F06830g	Compare to YALI0F04422g, similar to Saccharomyces cerevisiae BCY1 (YIL033C); ancestral locus Anc_7.206, similar to uniprot|P07278 Saccharomyces cerevisiae YIL033c SRA1 cAMP dependent protein kinase regulatory subunit
YALI1_F06858g	Compare to YALI0F04444g, similar to uniprot|P40047 Saccharomyces cerevisiae YER073w ALD5 aldehyde dehydrogenase (NAD+) mitochondrial, similar to Saccharomyces cerevisiae ALD6 (YPL061W); ancestral locus Anc_8.525
YALI1_F06896g	Compare to YALI0F04466g, some similarities with ca|CA2856|IPF7062 Candida albicans, similar to Saccharomyces cerevisiae YPL067C; ancestral locus Anc_8.533
YALI1_F06904g	Compare to YALI0F04532g, similar to uniprot|Q8TF88 Trichoderma virens Class V chitinase (Endochitinase class V), similar to Saccharomyces cerevisiae CTS2 (YDR371W); ancestral locus Anc_5.441
YALI1_F06941g	Compare to YALI0F04543g, similar to Saccharomyces cerevisiae JNM1 (YMR294W); ancestral locus Anc_5.32,gnl|GLV|YALI0F04543g [Yarrowia lipolytica] similar to uniprot|Q5AK45 Candida albicans Hypothetical protein
YALI1_F06956g	Compare to YALI0F04554g, similar to Saccharomyces cerevisiae DOS2 (YDR068W); ancestral locus Anc_8.187, some similarities with uniprot|Q9P5L4 Neurospora crassa Related to DOS1 protein and uniprot|P54858 Saccharomyces cerevisiae YDR068w DOS1 involved in genome stability
YALI1_F06991g	Compare to YALI0F04576g, similar to Saccharomyces cerevisiae PRI2 (YKL045W); ancestral locus Anc_2.566, similar to uniprot|P20457 Saccharomyces cerevisiae YKL045w PRI2 DNA-directed DNA polymerase alpha 58 KD subunit (DNA primase)
YALI1_F07042g	Compare to YALI0F04598g, similar to uniprot|Q6CAF5 Yarrowia lipolytica YALI0D03245g
YALI1_F07093g	Compare to YALI0F04620g, similar to uniprot|Q6CCX8 Yarrowia lipolytica YALI0C05687g
YALI1_F07135g	Compare to YALI0F04642g, no similarity
YALI1_F07181g	Compare to YALI0F04664g, similar to uniprot|P29469 Saccharomyces cerevisiae YBL023c MCM2 member of the MCM2P MCM3P CDC46P family
YALI1_F07246g	Compare to YALI0F04686g, weakly similar to wi|NCU08597.1 Neurospora crassa NCU08597.1 hypothetical protein
YALI1_F07318g	Compare to YALI0F04708g, similar to Saccharomyces cerevisiae RRP14 (YKL082C); ancestral locus Anc_2.636, similar to uniprot|P36080 Saccharomyces cerevisiae YKL082c
YALI1_F07344g	Compare to YALI0F04730g, uniprot|Q8TFK3 Yarrowia lipolytica GTP-binding protein
YALI1_F07376g	Compare to YALI0F04752g, no similarity
YALI1_F07384g	Compare to YALI0F04774g, weakly similar to uniprot|Q12349 Saccharomyces cerevisiae YLR295c ATP14 F1F0-ATPase complex subunit h
YALI1_F07401g	Compare to YALI0F04796g, some similarities with uniprot|Q7SDB2 Neurospora crassa NCU02098.1 hypothetical protein
YALI1_F07429g	Compare to YALI0F04818g, similar to uniprot|P30665 Saccharomyces cerevisiae YPR019w CDC54 member of the CDC46P/MCM2P/MCM3P family
YALI1_F07504g	Compare to YALI0F04884g, no similarity
YALI1_F07510g	Compare to YALI0F04906g, no similarity, similar to Saccharomyces cerevisiae RRN5 (YLR141W); ancestral locus Anc_8.347
YALI1_F07573g	Compare to YALI0F04972g, ancestral locus Anc_3.374, weakly similar to KLLA0B09108g Kluyveromyces lactis IPF 7279.1
YALI1_F07604g	Compare to YALI0F05016g, no similarity
YALI1_F07630g	Compare to YALI0F05038g, similar to uniprot|Q9P5K8 Neurospora crassa Probable 3- methyl-2-oxobutanoate dehydrogenase (Lipoamide)E1 beta chain
YALI1_F07655g	Compare to YALI0F05060g, similar to uniprot|Q12010 Saccharomyces cerevisiae YOL092w
YALI1_F07675g	Compare to YALI0F05082g, similar to uniprot|P20435 Saccharomyces cerevisiae YPR187w RPO26 DNA-directed RNA polymerase I II III 18 KD subunit, similar to Saccharomyces cerevisiae RPO26 (YPR187W); ancestral locus Anc_7.544
YALI1_F07699g	Compare to YALI0F05104g, weakly similar to uniprot|P39933 Saccharomyces cerevisiae YPR186c TFC2 TFIIIA transcription initiation factor, similar to Saccharomyces cerevisiae PZF1 (YPR186C); ancestral locus Anc_7.543
YALI1_F07747g	Compare to YALI0F05126g, similar to Saccharomyces cerevisiae PHO4 (YFR034C); ancestral locus Anc_7.191, weakly similar to KLLA0D16115g Kluyveromyces lactis IPF 4333.1
YALI1_F07793g	Compare to YALI0F05148g, weakly similar to uniprot|Q9P6D Neurospora crassa NCU01763.1 hypothetical protein
YALI1_F07819g	Compare to YALI0F05170g, similar to Saccharomyces cerevisiae FAF1 (YIL019W); ancestral locus Anc_7.192, some similarities with uniprot|P40546 Saccharomyces cerevisiae YIL019w
YALI1_F07827g	Compare to YALI0F05192g, similar to uniprot|P40545 Saccharomyces cerevisiae YIL020c HIS6 5 Pro-FAR isomerase, similar to Saccharomyces cerevisiae HIS6 (YIL020C); ancestral locus Anc_7.193
YALI1_F07847g	Compare to YALI0F05214g, similar to Saccharomyces cerevisiae TPI1 (YDR050C); ancestral locus Anc_3.288, similar to uniprot|P00942 Saccharomyces cerevisiae YDR050c TPI1 triose-phosphate isomerase singleton
YALI1_F07860g	Compare to YALI0F05236g, similar to Saccharomyces cerevisiae DAM1 (YGR113W); ancestral locus Anc_3.458, weakly similar to DEHA0B10791g Debaryomyces hansenii IPF 9981.1
YALI1_F07881g	Compare to YALI0F05258g, similar to Saccharomyces cerevisiae YIL110W; ancestral locus Anc_2.259, similar to uniprot|P40481 Saccharomyces cerevisiae YIL110w
YALI1_F07884g	Compare to YALI0F05280g, weakly similar to wi|NCU05067.1 Neurospora crassa NCU05067.1 hypothetical protein and uniprot|P53951 Saccharomyces cerevisiae YNL051w COD4 protein (Complexed with DOR1 protein 4), similar to Saccharomyces cerevisiae COG5 (YNL051W); ancestral locus Anc_2.260
YALI1_F07907g	Compare to YALI0F05302g, similar to Saccharomyces cerevisiae YNL050C; ancestral locus Anc_2.261, no similarity
YALI1_F07938g	Compare to YALI0F05324g, similar to wi|NCU02391.1 Neurospora crassa NCU02391. 1 hypothetical protein and uniprot|P40482 Saccharomyces cerevisiae YIL109c SEC24 component of COPII coat of ER-Golgi vesicles, similar to Saccharomyces cerevisiae SEC24 (YIL109C) and SFB2 (YNL049C); ancestral locus Anc_2.262
YALI1_F07990g	Compare to YALI0F05346g, weakly similar to uniprot|Q00858 Fusarium solani Cutinase gene palindrome-binding protein
YALI1_F08075g	Compare to YALI0F05390g, uniprot|Q12725 Yarrowia lipolytica Glucan 1 3-beta- glucosidase precursor (EC 3.2.1.58) (Exo-1 3-beta- glucanase)
YALI1_F08111g	Compare to YALI0F05412g, similar to Saccharomyces cerevisiae YDR124W; ancestral locus Anc_8.282, some similarities with uniprot|Q04608 Saccharomyces cerevisiae YDR124w
YALI1_F08146g	Compare to YALI0F05434g, some similarities with uniprot|Q9P501 Neurospora crassa B24P11.150 Conserved hypothetical protein
YALI1_F08170g	Compare to YALI0F05456g, similar to Saccharomyces cerevisiae SNX3 (YOR357C); ancestral locus Anc_7.30, similar to uniprot|Q08826 Saccharomyces cerevisiae YOR357c GRD19 putative golgi membrane protein-sorting protein (nexin)
YALI1_F08183g	Compare to YALI0F05478g, similar to Saccharomyces cerevisiae APC5 (YOR249C); ancestral locus Anc_8.689, similar to uniprot|Q08683 Saccharomyces cerevisiae YOR249c APC5 component of the anaphase-promoting complex
YALI1_F08225g	Compare to YALI0F05500g, similar to uniprot|P38127 Saccharomyces cerevisiae YBR192w RIM2 mitochondrial carrier protein, similar to Saccharomyces cerevisiae RIM2 (YBR192W); ancestral locus Anc_8.552
YALI1_F08260g	Compare to YALI0F05522g, highly similar to uniprot|Q12672 Saccharomyces cerevisiae YPL079w URP1B ribosomal or uniprot|Q02753 Saccharomyces cerevisiae YBR191w URP1A ribosomal protein L21, similar to Saccharomyces cerevisiae RPL21A (YBR191W) and RPL21B (YPL079W); ancestral locus Anc_8.553
YALI1_F08284g	Compare to YALI0F05544g, highly similar to wi|NCU01949.1 Neurospora crassa NCU01949.1 and uniprot|P05755 Saccharomyces cerevisiae YBR189w SUP46 ribosomal protein, similar to Saccharomyces cerevisiae RPS9B (YBR189W) and RPS9A (YPL081W); ancestral locus Anc_8.554
YALI1_F08292g	Compare to YALI0F05566g, similar to uniprot|P16370 Saccharomyces cerevisiae YIL021w RPB3 DNA-directed RNA-polymerase II, similar to Saccharomyces cerevisiae RPB3 (YIL021W); ancestral locus Anc_7.194
YALI1_F08324g	Compare to YALI0F05588g, similar to Saccharomyces cerevisiae JIP5 (YPR169W); ancestral locus Anc_7.525, weakly similar to DEHA0B11022g Debaryomyces hansenii IPF 9997.1 and KLLA0B10736g Kluyveromyces lactis IPF 7151.1
YALI1_F08349g	Compare to YALI0F05610g, similar to uniprot|P32378 Saccharomyces cerevisiae YNR041c COQ2 para-hydroxybenzoate-polyprenyltransferase, similar to Saccharomyces cerevisiae COQ2 (YNR041C); ancestral locus Anc_6.361
YALI1_F08363g	Compare to YALI0F05632g, similar to Saccharomyces cerevisiae MVD1 (YNR043W); ancestral locus Anc_6.362, similar to uniprot|P32377 Saccharomyces cerevisiae YNR043w MVD1 mevalonate pyrophosphate decarboxylase
YALI1_F08392g	Compare to YALI0F05654g, some similarities with uniprot|Q8EAT4 Shewanella oneidensis
YALI1_F08431g	Compare to YALI0F05676g, highly similar to uniprot|P23248 Saccharomyces cerevisiae YML063w or uniprot|P33442 Saccharomyces cerevisiae YLR441c, similar to Saccharomyces cerevisiae RPS1A (YLR441C) and RPS1B (YML063W); ancestral locus Anc_4.325
YALI1_F08454g	Compare to YALI0F05698g, weakly similar to uniprot|P32849 Saccharomyces cerevisiae YLR032w
YALI1_F08514g	Compare to YALI0F05720g, no similarity
YALI1_F08544g	Compare to YALI0F05742g, weakly similar to uniprot|Q9P7S9 Schizosaccharomyces pombe SPAC23G3.04.
YALI1_F08562g	Compare to YALI0F05764g, highly similar to uniprot|O00103 Schizosaccharomyces pombe Ubiquitin-conjugating enzyme UBCP4 OR SPCC1259.15C.
YALI1_F08585g	Compare to YALI0F05786g, similar to uniprot|Q6CAJ2 Yarrowia lipolytica YALI0D02299g
YALI1_F08635g	Compare to YALI0F05803g, similar to Saccharomyces cerevisiae RPS15 (YOL040C); ancestral locus Anc_7.95, highly similar to uniprot|Q01855 Saccharomyces cerevisiae YOL040c RPS21 40S small subunit ribosomal protein
YALI1_F08650g	Compare to YALI0F05830g, no similarity
YALI1_F08683g	Compare to YALI0F05852g, similar to Saccharomyces cerevisiae CRP1 (YHR146W) and MDG1 (YNL173C); ancestral locus Anc_2.81, some similarities with uniprot|Q98S43 Guillardia theta AMP-activated protein kinase beta 2 non-catalytic SU and other 5'-AMP-activated protein kinases beta subunits
YALI1_F08705g	Compare to YALI0F05874g, similar to Saccharomyces cerevisiae CYS3 (YAL012W); ancestral locus Anc_7.97, similar to uniprot|P31373 Saccharomyces cerevisiae YAL012w CYS3
YALI1_F08745g	Compare to YALI0F05896g, weakly similar to KLLA0F07821g Kluyveromyces lactis IPF 1402.1, similar to Saccharomyces cerevisiae DEP1 (YAL013W); ancestral locus Anc_7.94
YALI1_F08757g	Compare to YALI0F05918g, similar to Saccharomyces cerevisiae NOP12 (YOL041C); ancestral locus Anc_7.93, similar to uniprot|Q08208 Saccharomyces cerevisiae YOL041C
YALI1_F08784g	Compare to YALI0F05940g, similar to Saccharomyces cerevisiae LAP3 (YNL239W); ancestral locus Anc_2.5, similar to uniprot|Q01532 Saccharomyces cerevisiae YNL239w
YALI1_F08845g	Compare to YALI0F05962g, similar to Saccharomyces cerevisiae ACS1 (YAL054C); ancestral locus Anc_7.15, similar to uniprot|P52910 Saccharomyces cerevisiae YLR153c ACS2 acetyl-coenzyme A synthetase
YALI1_F08885g	Compare to YALI0F05984g, similar to DEHA0E10494g Debaryomyces hansenii
YALI1_F08930g	Compare to YALI0F06006g, no similarity
YALI1_F08944g	Compare to YALI0F06028g, weakly similar to uniprot|Q8WZV3 Neurospora crassa Conserved hypothetical protein, similar to Saccharomyces cerevisiae NUD1 (YOR373W); ancestral locus Anc_7.7
YALI1_F09003g	Truncated form of YALI0F06050g, uniprot|Q9UUT7 Yarrowia lipolytica Subunit NUKM of protein NADH:ubiquinone oxidoreductase (Complex I) precursor (EC 1.6.99.3)
YALI1_F09017g	Compare to YALI0F06061g, gnl|GLV|YALI0F06061g [Yarrowia lipolytica] NADH-ubiquinone reductase complex accessory subunit 10 5 kDa
YALI1_F09051g	Compare to YALI0F06072g, some similarities with uniprot|Q9C2C5 Neurospora crassa Probable cutinase transcription factor 1 beta and other transcription factors
YALI1_F09088g	Truncated form of YALI0F06094g, no similarity
YALI1_F09177g	Compare to YALI0F06116g, similar to uniprot|P32864 Saccharomyces cerevisiae YOR370c, similar to Saccharomyces cerevisiae MRS6 (YOR370C); ancestral locus Anc_7.10
YALI1_F09211g	Compare to YALI0F06138g, some similarities with uniprot|P39731 Saccharomyces cerevisiae YAL034wa, similar to Saccharomyces cerevisiae MTW1 (YAL034W-A); ancestral locus Anc_7.53
YALI1_F09230g	Compare to YALI0F06160g, similar to Saccharomyces cerevisiae RPS12 (YOR369C); ancestral locus Anc_7.11, highly similar to uniprot|P48589 Saccharomyces cerevisiae YOR369c
YALI1_F09265g	Compare to YALI0F06182g, similar to uniprot|P46669 Saccharomyces cerevisiae YOR340c RPA43 DNA-directed RNA polymerase I 36 KD subunit, similar to Saccharomyces cerevisiae RPA43 (YOR340C); ancestral locus Anc_7.52
YALI1_F09282g	Compare to YALI0F06204g, similar to Saccharomyces cerevisiae RAD17 (YOR368W); ancestral locus Anc_7.12, weakly similar to uniprot|P22193 Schizosaccharomyces pombe DNA repair protein rad1
YALI1_F09289g	Compare to YALI0F06226g, weakly similar to CA0416|IPF17492 Candida albicans IPF17492 unknown function, similar to Saccharomyces cerevisiae PEX22 (YAL055W); ancestral locus Anc_7.13
YALI1_F09314g	Compare to YALI0F06248g, weakly similar to uniprot|Q01926 Saccharomyces cerevisiae YOR334w MRS2 RNA splicing protein and member of the mitochondrial carrier
YALI1_F09317g	Compare to YALI0F06259g, gnl|GLV|YALI0F06259g [Yarrowia lipolytica] weakly similar to uniprot|P39103 Saccharomyces cerevisiae YML129C COX14 Mitochondrial membrane protein, sinvolved in translational regulation of Cox1p and assembly of cytochrome c oxidase (complex IV)
YALI1_F09335g	Compare to YALI0F06270g, ancestral locus Anc_8.869, similar to uniprot|Q10154 Schizosaccharomyces pombe
YALI1_F09345g	Compare to YALI0F06292g, ancestral locus Anc_8.870, highly similar to uniprot|Q09176 Schizosaccharomyces pombe Splicing factor U2AF 23 kDa subunit
YALI1_F09361g	Compare to YALI0F06314g, similar to Saccharomyces cerevisiae PRE8 (YML092C); ancestral locus Anc_8.871, highly similar to uniprot|P23639 Saccharomyces cerevisiae YML092c PRE8 20S proteasome subunit Y7 (alpha2)
YALI1_F09405g	Compare to YALI0F06336g, similar to uniprot|P38149 Saccharomyces cerevisiae YBR281c
YALI1_F09433g	Compare to YALI0F06358g, similar to uniprot|P25641 Saccharomyces cerevisiae YCR068w CVT17 conserved hypothetical protein, similar to Saccharomyces cerevisiae ATG15 (YCR068W); ancestral locus Anc_6.335
YALI1_F09456g	Compare to YALI0F06372g, similar to Saccharomyces cerevisiae TAF4 (YMR005W); ancestral locus Anc_6.40, similar to uniprot|P50105 Saccharomyces cerevisiae YMR005w MPT1
YALI1_F09481g	Compare to YALI0F06380g, no similarity
YALI1_F09518g	Compare to YALI0F06402g, similar to Saccharomyces cerevisiae YCS4 (YLR272C); ancestral locus Anc_6.68, similar to uniprot|Q06156 Saccharomyces cerevisiae YLR272c YCS4 subunit of condensin
YALI1_F09542g	Compare to YALI0F06424g, similar to Saccharomyces cerevisiae LAG1 (YHL003C) and LAC1 (YKL008C); ancestral locus Anc_2.501, similar to uniprot|P28496 Saccharomyces cerevisiae YKL008c LAC1 protein required with LAG1P for ER-to-Golgi transport of GPI-anchored proteins or uniprot|P38703 Saccharomyces cerevisiae YHL003c LAG1 longevity-assurance protein
YALI1_F09563g	Compare to YALI0F06446g, similar to Saccharomyces cerevisiae HSE1 (YHL002W); ancestral locus Anc_2.502, weakly similar to uniprot|P38753 Saccharomyces cerevisiae YHL002w
YALI1_F09598g	Compare to YALI0F06468g, similar to Saccharomyces cerevisiae SER1 (YOR184W); ancestral locus Anc_6.84, similar to uniprot|P33330 Saccharomyces cerevisiae YOR184w SER1 phosphoserine transaminase
YALI1_F09608g	Compare to YALI0F06490g, some similarities with uniprot|Q7SBF2 Neurospora crassa
YALI1_F09627g	Compare to YALI0F06512g, similar to uniprot|P25627 Saccharomyces cerevisiae YCR047c weak similarity to N-methyltransferases, similar to Saccharomyces cerevisiae BUD23 (YCR047C); ancestral locus Anc_6.316
YALI1_F09695g	Compare to YALI0F06534g, similar to Saccharomyces cerevisiae YDR332W; ancestral locus Anc_5.377, weakly similar to uniprot|Q06683 Saccharomyces cerevisiae YDR332w
YALI1_F09720g	Compare to YALI0F06556g, weakly similar to wi|NCU06665.1 Neurospora crassa and uniprot|P38137 Saccharomyces cerevisiae YBR222C Peroxisomal- coenzyme A synthetase
YALI1_F09747g	Compare to YALI0F06578g, similar to uniprot|P53629 Saccharomyces cerevisiae YNR019w ARE2 acyl-CoA sterol acyltransferase, similar to Saccharomyces cerevisiae ARE1 (YCR048W) and ARE2 (YNR019W); ancestral locus Anc_6.317
YALI1_F09788g	Compare to YALI0F06600g, no similarity
YALI1_F09802g	Compare to YALI0F06622g, weakly similar to ca|CA3582|IPF15466 Candida albicans and DEHA0F25564g Debaryomyces hansenii
YALI1_F09803g	Compare to YALI0F06644g, similar to Saccharomyces cerevisiae SMD2 (YLR275W); ancestral locus Anc_6.72, highly similar to uniprot|O14036 Schizosaccharomyces pombe SPAC2C4.03C.gene and uniprot|Q06217 Saccharomyces cerevisiae YLR275w SMD2 U1 snRNP protein
YALI1_F09833g	Compare to YALI0F06666g, no similarity
YALI1_F09846g	Compare to YALI0F06688g, highly similar to uniprot|Q7S0S0 Neurospora crassa NCU09013.1 and uniprot|O14155 Schizosaccharomyces pombe SPAC4A8.02C. gene
YALI1_F09856g	Compare to YALI0F06710g, similar to Saccharomyces cerevisiae DAL3 (YIR032C), similar to uniprot|P32459 Saccharomyces cerevisiae YIR032c DAL3 ureidoglycolate hydrolase
YALI1_F09896g	Compare to YALI0F06732g, similar to Saccharomyces cerevisiae MRPL15 (YLR312W-A); ancestral locus Anc_4.40, no similarity
YALI1_F09932g	Compare to YALI0F06754g, similar to ca|CA6061|IPF8302 Candida albicans
YALI1_F09965g	Compare to YALI0F06776g, weakly similar to uniprot|P39932 Saccharomyces cerevisiae YDR536w STL1 member of the sugar permease family
YALI1_F09996g	Compare to YALI0F06791g, similar to uniprot|Q07878 Saccharomyces cerevisiae YLL040C Vacuolar protein sorting-associated protein VPS13, similar to Saccharomyces cerevisiae VPS13 (YLL040C); ancestral locus Anc_4.14
YALI1_F10110g	Compare to YALI0F06820g, weakly similar to uniprot|P32785 Saccharomyces cerevisiae YBL013w FMT1 Methionyl-tRNA Transformylase, similar to Saccharomyces cerevisiae FMT1 (YBL013W); ancestral locus Anc_4.95
YALI1_F10115g	Compare to YALI0F06826g, similar to Saccharomyces cerevisiae SMT3 (YDR510W); ancestral locus Anc_1.51,gnl|GLV|YALI0F06826g [Yarrowia lipolytica] similar to uniprot|Q12306 Saccharomyces cerevisiae YDR510W SMT3 Ubiquitin-like protein precursor
YALI1_F10122g	Compare to YALI0F06842g, similar to uniprot|P25621 Saccharomyces cerevisiae YCR028c FEN2 high affinity H+/pantothenate symporter
YALI1_F10150g	Compare to YALI0F06864g, some similarities with DEHA0F23969g Debaryomyces hansenii IPF 6250.1, similar to Saccharomyces cerevisiae PSP1 (YDR505C) and YLR177W; ancestral locus Anc_1.55
YALI1_F10184g	Compare to YALI0F06886g, some similarities with uniprot|Q7SEL7 Neurospora crassa NCU02795.1
YALI1_F10193g	Compare to YALI0F06908g, weakly similar to uniprot|Q08902 Saccharomyces cerevisiae ORF YOR378W probable aminotriazole resistance protein
YALI1_F10224g	Compare to YALI0F06974g, similar to uniprot|P38115 Saccharomyces cerevisiae YBR149w ARA1 D-arabinose dehydrogenase large subunit
YALI1_F10253g	Compare to YALI0F07018g, some similarities with uniprot|P50276 Saccharomyces cerevisiae YGR055w MUP1 high affinity methionine permease
YALI1_F10296g	Compare to YALI0F07040g, weakly similar to uniprot|Q08905 Saccharomyces cerevisiae YOR381w FRE3
YALI1_F10342g	Compare to YALI0F07062g, similar to uniprot|Q07824 Saccharomyces cerevisiae YLL028w TPO1 polyamine transport protein
YALI1_F10385g	Compare to YALI0F07084g, similar to uniprot|P32600 Saccharomyces cerevisiae YKL203c TOR2 phosphatidylinositol 3-kinase or uniprot|P35169 Saccharomyces cerevisiae YJR066w TOR1 phosphatidylinositol 3-kinase
YALI1_F10486g	Compare to YALI0F07106g, weakly similar to uniprot|P38680 Neurospora crassa NCU06619.1 N amino acid transport system protein (methyltryptophan resistance protein)
YALI1_F10530g	Compare to YALI0F07128g, no similarity
YALI1_F10552g	Compare to YALI0F07194g, no similarity
YALI1_F10585g	Compare to YALI0F07216g, similar to uniprot|P08640 Saccharomyces cerevisiae YIR019c STA1 extracellular alpha-1 4-glucan glucosidase
YALI1_F10616g	Compare to YALI0F07238g, similar to Saccharomyces cerevisiae RTS2 (YOR077W); ancestral locus Anc_5.685, weakly similar to uniprot|O76926 Drosophila melanogaster KIN17 protein (Fragment) and uniprot|O76926 Drosophila melanogaster KIN17 protein (Fragment)
YALI1_F10633g	Compare to YALI0F07260g, uniprot|Q70MH4 Yarrowia lipolytica Alpha 1 6 mannosyltransferase
YALI1_F10652g	Converted to coding from non-coding YALI0F07282g, similar to uniprot|O59805 Schizosaccharomyces pombe Acetamidase and uniprot|P22580 Saccharomyces cerevisiae YDR242w AMD2 amidase
YALI1_F10660g	Converted to coding from non-coding YALI0F07282g, similar to uniprot|O59805 Schizosaccharomyces pombe Acetamidase and uniprot|P22580 Saccharomyces cerevisiae YDR242w AMD2 amidase
YALI1_F10671g	Compare to YALI0F07315g, similar to Saccharomyces cerevisiae HGH1 (YGR187C); ancestral locus Anc_5.194, similar to uniprot|P48362 Saccharomyces cerevisiae YGR187c HGH1
YALI1_F10688g	Compare to YALI0F07337g, similar to uniprot|P40339 Saccharomyces cerevisiae YOL094c RFC4 DNA replication factor C 37 kDa subunit
YALI1_F10713g	Compare to YALI0F07359g, similar to Saccharomyces cerevisiae RCE1 (YMR274C); ancestral locus Anc_8.832, weakly similar to uniprot|Q03530 Saccharomyces cerevisiae YMR274c RCE1 modulator of RAS2P
YALI1_F10731g	Compare to YALI0F07381g, some similarities with uniprot|P39904 Saccharomyces cerevisiae YDR484w SAC2 suppressor of actin mutation, similar to Saccharomyces cerevisiae VPS52 (YDR484W); ancestral locus Anc_3.102
YALI1_F10760g	Compare to YALI0F07447g, weakly similar to wi|NCU00319.1 Neurospora crassa and uniprot|P53833 Saccharomyces cerevisiae YNL282w RNases MRP/P 22.6 kDa subunit (RNA processing protein POP3), similar to Saccharomyces cerevisiae POP3 (YNL282W); ancestral locus Anc_3.79
YALI1_F10774g	Truncated form of YALI0F07469g, highly similar to uniprot|P21242 Saccharomyces cerevisiae YOR362c PRE10 20S proteasome subunit C1 (alpha7), similar to Saccharomyces cerevisiae PRE10 (YOR362C); ancestral locus Anc_7.20
YALI1_F10786g	Truncated form of YALI0F07491g, similar to uniprot|P39722 Saccharomyces cerevisiae YAL048c vacuolar aspartic proteasse, similar to Saccharomyces cerevisiae GEM1 (YAL048C); ancestral locus Anc_7.19
YALI1_F10839g	Compare to YALI0F07513g, some similarities with uniprot|Q26079 Placopecten magellanicus Myosin heavy chain and other Myosin heavy chains
YALI1_F10866g	Truncated form of YALI0F07535g, weakly similar to uniprot|P40552 Saccharomyces cerevisiae YIL011w
YALI1_F10900g	Compare to YALI0F07557g, some similarities with uniprot|P54199 Saccharomyces cerevisiae YDL028c MPS1 serine/threonine/tyrosine protein kinase
YALI1_F10928g	Compare to YALI0F07579g, similar to DEHA0C07249g Debaryomyces hansenii, similar to Saccharomyces cerevisiae YKR074W; ancestral locus Anc_5.659
YALI1_F10938g	Compare to YALI0F07601g, similar to uniprot|O13728 Schizosaccharomyces pombe SPAC15A10.08
YALI1_F10971g	Compare to YALI0F07623g, similar to DEHA0F13101g Debaryomyces hansenii and uniprot|O93997 Candida albicans
YALI1_F10977g	Compare to YALI0F07645g, no similarity
YALI1_F10990g	Compare to YALI0F07667g, similar to uniprot|P25375 Saccharomyces cerevisiae YCL057w PRD1 proteinase yscD
YALI1_F11020g	Compare to YALI0F07689g, no similarity
YALI1_F11049g	Compare to YALI0F07711g, similar to Saccharomyces cerevisiae PGI1 (YBR196C); ancestral locus Anc_8.547, highly similar to uniprot|P12709 Saccharomyces cerevisiae YBR196c PGI1 glucose-6-phosphate isomerase
YALI1_F11080g	Compare to YALI0F07733g, similar to Saccharomyces cerevisiae GPI8 (YDR331W); ancestral locus Anc_5.375, similar to uniprot|P49018 Saccharomyces cerevisiae YDR331w GPI8 essential for GPI anchor attachment (GPI transamidase)
YALI1_F11093g	Compare to YALI0F07755g, weakly similar to DEHA0F27797g Debaryomyces hansenii
YALI1_F11141g	Compare to YALI0F07777g, weakly similar to uniprot|Q95ST9 Drosophila melanogaster CG15780
YALI1_F11186g	Compare to YALI0F07799g, no similarity
YALI1_F11199g	Compare to YALI0F07821g, similar to uniprot|Q10242 Schizosaccharomyces pombe Probable gluconokinase, similar to Saccharomyces cerevisiae YDR248C; ancestral locus Anc_8.478
YALI1_F11224g	Compare to YALI0F07843g, similar to Saccharomyces cerevisiae UBX5 (YDR330W); ancestral locus Anc_5.374, similar to uniprot|Q06682 Saccharomyces cerevisiae YDR330w
YALI1_F11243g	Compare to YALI0F07865g, similar to Saccharomyces cerevisiae CTL1 (YMR180C) and CET1 (YPL228W); ancestral locus Anc_6.254, some similarities with uniprot|O13297 Saccharomyces cerevisiae YPL228w CET1 RNA 5'-triphosphatase (mRNA capping enzyme beta subunit)
YALI1_F11261g	Compare to YALI0F07887g, similar to uniprot|Q7SFF2 Neurospora crassa NCU00879.1 hypothetical protein
YALI1_F11277g	Compare to YALI0F07909g, weakly similar to uniprot|Q9FJE1 Arabidopsis thaliana RNA and export factor binding protein 2-I-like protein, similar to Saccharomyces cerevisiae YRA1 (YDR381W); ancestral locus Anc_5.458
YALI1_F11292g	Compare to YALI0F07931g, weakly similar to uniprot|Q96XG1 Sulfolobus tokodaii Putative senescence marker protein ST2555 gene and uniprot|P38235 Saccharomyces cerevisiae YBR053c, similar to Saccharomyces cerevisiae YBR053C; ancestral locus Anc_3.262
YALI1_F11308g	Compare to YALI0F07953g, weakly similar to uniprot|P46973 Saccharomyces cerevisiae YJR055w HIT1 required for growth at high temperature, similar to Saccharomyces cerevisiae HIT1 (YJR055W); ancestral locus Anc_1.499
YALI1_F11313g	Compare to YALI0F07975g, similar to DEHA0G24398g Debaryomyces hansenii
YALI1_F11330g	Compare to YALI0F08019g, weakly similar to uniprot|Q12015 Saccharomyces cerevisiae YOR223w, similar to Saccharomyces cerevisiae YOR223W; ancestral locus Anc_8.645
YALI1_F11363g	Compare to YALI0F08041g, weakly similar to uniprot|P48562 Saccharomyces cerevisiae YNL298w CLA4 ser/thr protein kinase
YALI1_F11396g	Compare to YALI0F08063g, similar to uniprot|O43081 Schizosaccharomyces pombe MSF membrane transporter
YALI1_F11417g	Compare to YALI0F08085g, no similarity
YALI1_F11449g	Compare to YALI0F08107g, no similarity
YALI1_F11481g	Compare to YALI0F08129g, weakly similar to uniprot|AAO79986 Enterococcus faecalis EF0111 gene Oxidoreductase zinc-binding and uniprot|P28625 Saccharomyces cerevisiae YMR152w YIM1 mitochondrial inner membrane protease
YALI1_F11493g	Compare to YALI0F08151g, similar to uniprot|P38861 Saccharomyces cerevisiae YHR170w NMD3 nonsense-mediated mRNA decay protein, similar to Saccharomyces cerevisiae NMD3 (YHR170W); ancestral locus Anc_5.67
YALI1_F11553g	Compare to YALI0F08165g, some similarities with uniprot|P41892 Schizosaccharomyces pombe 7 CDC7 OR SPBC21.06C gene Cell division control protein
YALI1_F11583g	Compare to YALI0F08195g, similar to uniprot|P34227 Saccharomyces cerevisiae YBL064c
YALI1_F11605g	Compare to YALI0F08217g, similar to Saccharomyces cerevisiae YPL206C; ancestral locus Anc_6.217, weakly similar to uniprot|Q08959 Saccharomyces cerevisiae YPL206C
YALI1_F11635g	Compare to YALI0F08283g, weakly similar to uniprot|P53164 Saccharomyces cerevisiae YGL067w NPY1 NADH pyrophosphatase I, similar to Saccharomyces cerevisiae NPY1 (YGL067W); ancestral locus Anc_6.216
YALI1_F11658g	Compare to YALI0F08305g, similar to Saccharomyces cerevisiae HRR25 (YPL204W); ancestral locus Anc_6.215, similar to uniprot|P29295 Saccharomyces cerevisiae YPL204w HRR25 casein kinase I
YALI1_F11689g	Compare to YALI0F08327g, weakly similar to uniprot|Q08245 Saccharomyces cerevisiae YOL109w ZEO1
YALI1_F11729g	Compare to YALI0F08349g, similar to Saccharomyces cerevisiae ATG9 (YDL149W); ancestral locus Anc_7.328, some similarities with uniprot|Q12142 Saccharomyces cerevisiae YDL149W PG9 integral membrane protein required for Cvt and autophagy transport
YALI1_F11781g	Compare to YALI0F08371g, similar to Saccharomyces cerevisiae NOP14 (YDL148C); ancestral locus Anc_7.327, similar to uniprot|Q99207 Saccharomyces cerevisiae YDL148C nuclear and nucleolar protein
YALI1_F11787g	Compare to YALI0F08393g, similar to uniprot|Q02642 Saccharomyces cerevisiae YPL037c DNA-binding enhancer protein, similar to Saccharomyces cerevisiae BTT1 (YDR252W) and EGD1 (YPL037C); ancestral locus Anc_8.485
YALI1_F11827g	Compare to YALI0F08415g, similar to wi|NCU00678.1 Neurospora crassa and uniprot|Q04792 Saccharomyces cerevisiae YMR250w
YALI1_F11871g	Compare to YALI0F08459g, highly similar to uniprot|P38203 Saccharomyces cerevisiae YBL026w SNP3 Sm-like
YALI1_F11878g	Truncated form of YALI0F08481g, uniprot|Q9HFC7 Yarrowia lipolytica Translocon subunit, similar to Saccharomyces cerevisiae SBH2 (YER019C-A) and SBH1 (YER087C-B); ancestral locus Anc_7.369
YALI1_F11905g	Compare to YALI0F08503g, no similarity
YALI1_F11907g	Compare to YALI0F08525g, no similarity possibly noncoding
YALI1_F11930g	Compare to YALI0F08569g, similar to uniprot|P26783 Saccharomyces cerevisiae YJR123w RPS5 ribosomal protein S5, similar to Saccharomyces cerevisiae RPS5 (YJR123W); ancestral locus Anc_7.509
YALI1_F11956g	Compare to YALI0F08591g, similar to Saccharomyces cerevisiae MAK10 (YEL053C); ancestral locus Anc_5.521, weakly similar to wi|NCU03557.1 Neurospora crassa and uniprot|Q02197 Saccharomyces cerevisiae YEL053c MAK10 glucose-repressible protein
YALI1_F12013g	Compare to YALI0F08613g, similar to Saccharomyces cerevisiae QCR2 (YPR191W); ancestral locus Anc_7.548, weakly similar to uniprot|P07257 Saccharomyces cerevisiae YPR191w QCR2 ubiquinol--cytochrome-c reductase 40KD chain II
YALI1_F12033g	Compare to YALI0F08635g, similar to Saccharomyces cerevisiae RPC82 (YPR190C); ancestral locus Anc_7.547, weakly similar to uniprot|P32349 Saccharomyces cerevisiae YPR190c RPC82 DNA-directed RNA polymerase III 82 KD subunit
YALI1_F12080g	Compare to YALI0F08657g, weakly similar to uniprot|Q06679 Saccharomyces cerevisiae YDR324c, similar to Saccharomyces cerevisiae UTP4 (YDR324C); ancestral locus Anc_5.366
YALI1_F12089g	Compare to YALI0F08679g, weakly similar to uniprot|Q06680 Saccharomyces cerevisiae YDR325w YCG1 Yeast Condensin G, similar to Saccharomyces cerevisiae YCG1 (YDR325W); ancestral locus Anc_5.367
YALI1_F12138g	Compare to YALI0F08701g, similar to uniprot|P25087 Saccharomyces cerevisiae YML008c ERG6 S-adenosyl-methionine and wi|NCU03006.1 Neurospora crassa, similar to Saccharomyces cerevisiae ERG6 (YML008C); ancestral locus Anc_5.529
YALI1_F12176g	Compare to YALI0F08723g, weakly similar to uniprot|P47011 Saccharomyces cerevisiae YJL137c GLG2 self-glucosylating initiator of glycogen synthesis, similar to Saccharomyces cerevisiae GNT1 (YOR320C); ancestral locus Anc_8.798
YALI1_F12254g	Truncated form of YALI0F08789g, weakly similar to uniprot|Q9P4U6 Emericella nidulans NHK1 gene HHK1 protein and uniprot|P39928 Saccharomyces cerevisiae YIL147c SLN1 two-component signal transducer
YALI1_F12312g	Compare to YALI0F08811g, no similarity
YALI1_F12330g	Compare to YALI0F08833g, weakly similar to uniprot|P15424 Saccharomyces cerevisiae YDR194c MSS116 RNA helicase of the DEAD box family
YALI1_F12365g	Compare to YALI0F08855g, similar to Saccharomyces cerevisiae BCK1 (YJL095W); ancestral locus Anc_1.271, weakly similar to uniprot|Q01389 Saccharomyces cerevisiae YJL095w BCK1 ser/thr protein kinase of the MEKK family
YALI1_F12422g	Compare to YALI0F08877g, similar to Saccharomyces cerevisiae MRPL49 (YJL096W); ancestral locus Anc_1.270, similar to uniprot|P40858 Saccharomyces cerevisiae YJL096w MRPL49 ribosomal protein YmL49 mitochondrial
YALI1_F12434g	Compare to YALI0F08899g, weakly similar to CAGL0M06259g Candida glabrata and uniprot|P38297 Saccharomyces cerevisiae YBR179c FZO1 required for biogenesis of mitochondria
YALI1_F12478g	Compare to YALI0F08921g, similar to uniprot|O94460 Schizosaccharomyces pombe SPAC1687.19C. Probable queuine tRNA-ribosyltransferase (EC 2.4.2.29) (tRNA-guanine transglycosylase)
YALI1_F12504g	Compare to YALI0F08943g, no similarity
YALI1_F12535g	Compare to YALI0F08965g, similar to Saccharomyces cerevisiae THO1 (YER063W); ancestral locus Anc_7.244, weakly similar to uniprot|P40040 Saccharomyces cerevisiae YER063w and DEHA0B10098g Debaryomyces hansenii
YALI1_F12562g	Compare to YALI0F08987g, no similarity
YALI1_F12578g	Compare to YALI0F09009g, no similarity
YALI1_F12616g	Compare to YALI0F09031g, similar to uniprot|Q6CI91 Yarrowia lipolytica YALI0A00550g
YALI1_F12635g	Compare to YALI0F09053g, weakly similar to DEHA0E12738g Debaryomyces hansenii and ca|CA0222|IPF12141 Candida albicans
YALI1_F12649g	Compare to YALI0F09075g, similar to uniprot|P53111 Saccharomyces cerevisiae YGL157w and DEHA0A06347g Debaryomyces hansenii
YALI1_F12666g	Compare to YALI0F09097g, similar to uniprot|P53111 Saccharomyces cerevisiae YGL157w and DEHA0A06347g Debaryomyces hansenii
YALI1_F12712g	Compare to YALI0F09119g, some similarities with DEHA0C11132g Debaryomyces hansenii
YALI1_F12757g	Compare to YALI0F09141g, some similarities with uniprot|P12689 Saccharomyces cerevisiae YOR346w REV1 DNA repair and DEHA0D11528g Debaryomyces hansenii, similar to Saccharomyces cerevisiae REV1 (YOR346W); ancestral locus Anc_7.46
YALI1_F12810g	Compare to YALI0F09163g, weakly similar to uniprot|Q12303 Saccharomyces cerevisiae YLR121c YPS3 GPI-anchored aspartyl protease 3 (yapsin 3) and DEHA0A03729g Debaryomyces hansenii
YALI1_F12842g	Compare to YALI0F09185g, uniprot|P30614 Yarrowia lipolytica Pyruvate kinase, similar to Saccharomyces cerevisiae CDC19 (YAL038W) and PYK2 (YOR347C); ancestral locus Anc_7.45
YALI1_F12874g	Truncated form of YALI0F09229g, highly similar to uniprot|P36010 Saccharomyces cerevisiae YKL067w YNK1 nucleoside diphosphate kinase, similar to Saccharomyces cerevisiae YNK1 (YKL067W); ancestral locus Anc_2.606
YALI1_F12895g	Compare to YALI0F09251g, similar to uniprot|P78609 Pichia jadinii Uricase (Urate oxidase)
YALI1_F12917g	Compare to YALI0F09273g, similar to uniprot|P43550 Saccharomyces cerevisiae YFL053w DAK2 Dihydroxyacetone kinase 2 or uniprot|P54838 Saccharomyces cerevisiae YML070w DAK1 dihydroxyacetone kinase and DEHA0A03971g Debaryomyces hansenii
YALI1_F12946g	Compare to YALI0F09295g, weakly similar to uniprot|P32910 Saccharomyces cerevisiae YNR003c RPC34 DNA-directed RNA polymerase III 34 KD subunit and KLLA0D04532g Kluyveromyces lactis, similar to Saccharomyces cerevisiae RPC34 (YNR003C); ancestral locus Anc_1.426
YALI1_F12951g	Compare to YALI0F09317g, no similarity
YALI1_F12969g	Compare to YALI0F09339g, some similarities with uniprot|P15700 Saccharomyces cerevisiae YKL024c URA6 uridine-monophosphate kinase and DEHA0D14762g Debaryomyces hansenii, similar to Saccharomyces cerevisiae YMR157C; ancestral locus Anc_2.358
YALI1_F12983g	Compare to YALI0F09361g, similar to uniprot|Q7S950 Neurospora crassa, similar to Saccharomyces cerevisiae SNU23 (YDL098C); ancestral locus Anc_2.359
YALI1_F13001g	Compare to YALI0F09383g, similar to uniprot|P20436 Saccharomyces cerevisiae YOR224C DNA-directed RNA polymerases I II and III 14.5 kDa polypeptide (EC 2.7.7.6) (ABC14.4), similar to Saccharomyces cerevisiae RPB8 (YOR224C); ancestral locus Anc_8.646
YALI1_F13017g	Compare to YALI0F09405g, highly similar to uniprot|P23968 Saccharomyces cerevisiae YHR026w PPA1 H+-ATPase
YALI1_F13023g	Compare to YALI0F09427g, weakly similar to ca|CA3280|IPF6269.3 Candida albicans
YALI1_F13039g	Compare to YALI0F09449g, similar to Saccharomyces cerevisiae HEM4 (YOR278W); ancestral locus Anc_8.734, similar to uniprot|P06174 Saccharomyces cerevisiae YOR278w HEM4 uroporphyrinogen III synthase and DEHA0E06424g Debaryomyces hansenii
YALI1_F13046g	Compare to YALI0F09471g, similar to uniprot|P53323 Saccharomyces cerevisiae YGR262c and ca|CA2183|IPF6872 Candida albicans, similar to Saccharomyces cerevisiae BUD32 (YGR262C); ancestral locus Anc_5.43
YALI1_F13072g	Compare to YALI0F09493g, weakly similar to uniprot|P19736 Saccharomyces cerevisiae YDL030w PRP9 pre-mRNA splicing factor and DEHA0E11946g Debaryomyces hansenii, similar to Saccharomyces cerevisiae PRP9 (YDL030W); ancestral locus Anc_3.160
YALI1_F13079g	Compare to YALI0F09515g, no similarity
YALI1_F13088g	Compare to YALI0F09537g, no similarity possibly noncoding
YALI1_F13097g	Compare to YALI0F09559g, similar to Saccharomyces cerevisiae VPS34 (YLR240W); ancestral locus Anc_8.401, similar to uniprot|P22543 Saccharomyces cerevisiae YLR240w VPS34 phosphatidylinositol 3-kinase and DEHA0G14157g Debaryomyces hansenii
YALI1_F13134g	Compare to YALI0F09581g, some similarities with uniprot|P49777 Schizosaccharomyces pombe ARS-binding protein 1
YALI1_F13170g	Compare to YALI0F09603g, similar to uniprot|P32771 Saccharomyces cerevisiae YDL168w SFA1 long-chain alcohol dehydrogenase and DEHA0G06457g Debaryomyces hansenii
YALI1_F13202g	Compare to YALI0F09625g, similar to Saccharomyces cerevisiae YDR196C; ancestral locus Anc_8.404, similar to uniprot|Q03941 Saccharomyces cerevisiae YDR196c and DEHA0G14179g Debaryomyces hansenii
YALI1_F13211g	Compare to YALI0F09647g, no similarity
YALI1_F13220g	Compare to YALI0F09669g, similar to Saccharomyces cerevisiae EFB1 (YAL003W); ancestral locus Anc_4.130, highly similar to uniprot|P32471 Saccharomyces cerevisiae YAL003w EFB1 translation elongation factor eEF1beta
YALI1_F13268g	Compare to YALI0F09691g, similar to uniprot|Q06593 Saccharomyces cerevisiae YPR194C protein HRD799
YALI1_F13339g	Compare to YALI0F09746g, similar to uniprot|P24583 Saccharomyces cerevisiae YBL105c PKC1 ser/thr protein kinase
YALI1_F13366g	Compare to YALI0F09768g, similar to Saccharomyces cerevisiae MRP10 (YDL045W-A); ancestral locus Anc_3.145, similar to uniprot|O75012 Saccharomyces cerevisiae YDL045W-A MRP10 protein 95 AA
YALI1_F13373g	Compare to YALI0F09790g, highly similar to uniprot|P05759 Saccharomyces cerevisiae YLR167W RPS31 Fusion protein that is cleaved to yield ubiquitin and a ribosomal protein of the small subunit
YALI1_F13384g	Compare to YALI0F09812g, similar to ca|CA2491|IPF7221 Candida albicans IPF7221
YALI1_F13395g	Compare to YALI0F09834g, similar to Saccharomyces cerevisiae RPN2 (YIL075C); ancestral locus Anc_7.274, similar to uniprot|P32565 Saccharomyces cerevisiae YIL075c SEN3 26S proteasome regulatory subunit and DEHA0B11220g Debaryomyces hansenii
YALI1_F13446g	Compare to YALI0F09856g, similar to Saccharomyces cerevisiae UTP7 (YER082C); ancestral locus Anc_7.275, similar to uniprot|P40055 Saccharomyces cerevisiae YER082c and DEHA0B10747g Debaryomyces hansenii
YALI1_F13452g	Compare to YALI0F09878g, uniprot|Q5ZNC4 Yarrowia lipolytica ANL1P interacting protein
YALI1_F13476g	Compare to YALI0F09944g, no similarity
YALI1_F13505g	Compare to YALI0F09966g, similar to uniprot|P40054 Saccharomyces cerevisiae YER081w SER3 3-phosphoglycerate dehydrogenase and DEHA0B11198g Debaryomyces hansenii, similar to Saccharomyces cerevisiae SER3 (YER081W) and SER33 (YIL074C); ancestral locus Anc_7.273
YALI1_F13526g	Compare to YALI0F09988g, similar to Saccharomyces cerevisiae OMA1 (YKR087C); ancestral locus Anc_5.684, weakly similar to uniprot|P36163 Saccharomyces cerevisiae YKR087c
YALI1_F13550g	Compare to YALI0F10010g, weakly similar to uniprot|P36165 Saccharomyces cerevisiae YKR089c and DEHA0E06127g Debaryomyces hansenii, similar to Saccharomyces cerevisiae TGL4 (YKR089C) and TGL5 (YOR081C); ancestral locus Anc_5.690
YALI1_F13579g	Compare to YALI0F10032g, similar to Saccharomyces cerevisiae MRPL6 (YHR147C); ancestral locus Anc_5.109, weakly similar to uniprot|P32904 Saccharomyces cerevisiae YHR147c MRPL6 ribosomal protein of the large subunit mitochondrial and DEHA0B02739g Debaryomyces hansenii
YALI1_F13597g	Compare to YALI0F10054g, similar to Saccharomyces cerevisiae YIL157C; ancestral locus Anc_5.715, weakly similar to DEHA0B02739g Debaryomyces hansenii
YALI1_F13602g	Compare to YALI0F10076g, similar to uniprot|P31334 Saccharomyces cerevisiae YGR220c MRPL9 ribosomal protein of the large subunit mitochondrial, similar to Saccharomyces cerevisiae MRPL9 (YGR220C); ancestral locus Anc_5.110
YALI1_F13644g	Compare to YALI0F10098g, similar to Saccharomyces cerevisiae CRM1 (YGR218W); ancestral locus Anc_5.111, similar to uniprot|P30822 Saccharomyces cerevisiae YGR218w CRM1 nuclear export factor exportin
YALI1_F13691g	Compare to YALI0F10131g, weakly similar to uniprot|Q873A0 Neurospora crassa B24N11.240.gene CAD70410 and KLLA0E16016g Kluyveromyces lactis
YALI1_F13719g	Compare to YALI0F10153g, similar to uniprot|P33313 Saccharomyces cerevisiae YBR155w CNS1 and DEHA0D09999g Debaryomyces hansenii
YALI1_F13793g	Compare to YALI0F10175g, no similarity
YALI1_F13875g	Compare to YALI0F10197g, similar to uniprot|Q9HGY3 Candida boidinii D-amino acid oxidase
YALI1_F13908g	Compare to YALI0F10219g, weakly similar to uniprot|Q9YBD7 Aeropyrum pernix Hypothetical protein APE1660 and DEHA0B08569g Debaryomyces hansenii
YALI1_F13953g	Compare to YALI0F10241g, weakly similar to uniprot|Q06593 Saccharomyces cerevisiae YPR194c OPT2 and DEHA0B16621g Debaryomyces hansenii
YALI1_F14009g	Compare to YALI0F10285g, weakly similar to uniprot|Q871F0 Neurospora crassa B7H23.310.gene and DEHA0F22847g Debaryomyces hansenii,ancestral locus Anc_8.169
YALI1_F14024g	Compare to YALI0F10307g, weakly similar to uniprot|P25301 Saccharomyces cerevisiae YDR004w RAD57 DNA repair protein and KLLA0E17567g Kluyveromyces lactis
YALI1_F14072g	Truncated form of YALI0F10373g, some similarities with uniprot|P18899 Saccharomyces cerevisiae YMR173w DDR48 heat shock protein
YALI1_F14107g	Compare to YALI0F10439g, no similarity
YALI1_F14136g	Compare to YALI0F10461g, similar to uniprot|Q03516 Saccharomyces cerevisiae YMR266w and DEHA0F12254g Debaryomyces hansenii
YALI1_F14168g	Compare to YALI0F10483g, similar to Saccharomyces cerevisiae SRB6 (YBR253W); ancestral locus Anc_7.174, similar to uniprot|P32570 Saccharomyces cerevisiae YBR253w SRB6 DNA-directed RNA polymerase II suppressor protein
YALI1_F14175g	Compare to YALI0F10505g, similar to uniprot|P32345 Saccharomyces cerevisiae YDR075w PPH3 protein ser/thr phosphatase
YALI1_F14201g	Truncated form of YALI0F10527g, conserved hypothetical protein
YALI1_F14213g	Compare to YALI0F10541g, similar to uniprot|P41910 Saccharomyces cerevisiae YDR005c MAF1 required for sorting of MOD5P, similar to Saccharomyces cerevisiae MAF1 (YDR005C); ancestral locus Anc_3.197
YALI1_F14239g	Compare to YALI0F10549g, weakly similar to uniprot|Q12303 Saccharomyces cerevisiae Putative aspartyl protease YLR121C precursor
YALI1_F14290g	Compare to YALI0F10615g, weakly similar to DEHA0G25322g Debaryomyces hansenii, similar to Saccharomyces cerevisiae YOR228C; ancestral locus Anc_8.649
YALI1_F14303g	Compare to YALI0F10637g, no similarity
YALI1_F14342g	Compare to YALI0F10659g, similar to uniprot|P32266 Saccharomyces cerevisiae YOR211c MGM1 dynamin-like protein and DEHA0G20273g Debaryomyces hansenii
YALI1_F14351t	Converted to coding from non-coding YALI0F10681g, Partial Line element, uniprot|Q8NIP3 Yarrowia lipolytica Reverse transcriptase 3' end
YALI1_F14368g	Compare to YALI0F10703g, weakly similar to uniprot|P53723 Saccharomyces cerevisiae YNR021w and EHA-IPF6127.1, similar to Saccharomyces cerevisiae YNR021W; ancestral locus Anc_6.320
YALI1_F14374g	Compare to YALI0F10725g, similar to uniprot|P46943 Saccharomyces cerevisiae YLR289w GUF1 and DEHA0F02508g Debaryomyces hansenii and KLLA0C04862g Kluyveromyces lactis, similar to Saccharomyces cerevisiae GUF1 (YLR289W); ancestral locus Anc_6.86
YALI1_F14403g	Compare to YALI0F10747g, similar to Saccharomyces cerevisiae YCR051W; ancestral locus Anc_6.319, similar to uniprot|P25631 Saccharomyces cerevisiae YCR051w and DEHA0F25608g Debaryomyces hansenii and KLLA0C09108g Kluyveromyces lactis
YALI1_F14409g	Compare to YALI0F10769g, similar to uniprot|P53722 Saccharomyces cerevisiae YNR020c and KLLA0C09130g Debaryomyces hansenii and DEHA0F25630g Debaryomyces hansenii, similar to Saccharomyces cerevisiae ATP23 (YNR020C); ancestral locus Anc_6.318
YALI1_F14443g	Compare to YALI0F10824g, no similarity
YALI1_F14495g	Compare to YALI0F10857g, uniprot|O74935 Yarrowia lipolytica POX2 Acyl-CoA oxidase 2 (EC 1.3.3.6)
YALI1_F14542g	Compare to YALI0F10901g, some similarities with uniprot|P08640 Saccharomyces cerevisiae YIR019c
YALI1_F14583g	Compare to YALI0F10923g, similar to Saccharomyces cerevisiae XKS1 (YGR194C); ancestral locus Anc_5.152, similar to uniprot|P42826 Saccharomyces cerevisiae YGR194c XKS1 xylulokinase and DEHA0C07788g Debaryomyces hansenii
YALI1_F14625g	Compare to YALI0F10945g, no similarity
YALI1_F14650g	Compare to YALI0F11011g, no similarity
YALI1_F14688g	Compare to YALI0F11033g, similar to Saccharomyces cerevisiae STE24 (YJR117W); ancestral locus Anc_7.501, similar to uniprot|P47154 Saccharomyces cerevisiae YJR117w STE24 zinc metallo-protease and DEHA0F06820g Debaryomyces hansenii
YALI1_F14712g	Compare to YALI0F11055g, similar to Saccharomyces cerevisiae RPS13 (YDR064W); ancestral locus Anc_8.179, highly similar to uniprot|P05756 Saccharomyces cerevisiae YDR064w YS15 ribosomal protein
YALI1_F14729g	Compare to YALI0F11077g, similar to uniprot|P38841 Saccharomyces cerevisiae YHR138c
YALI1_F14746g	Compare to YALI0F11099g, no similarity
YALI1_F14766g	Compare to YALI0F11121g, similar to uniprot|P38260 Saccharomyces cerevisiae YBR101c and DEHA0F16456g Debaryomyces hansenii, similar to Saccharomyces cerevisiae FES1 (YBR101C); ancestral locus Anc_3.342
YALI1_F14793g	Compare to YALI0F11143g, some similarities with uniprot|P38261 Saccharomyces cerevisiae YBR102c EXO84 exocyst protein essential for secretion, similar to Saccharomyces cerevisiae EXO84 (YBR102C); ancestral locus Anc_3.343
YALI1_F14805g	Compare to YALI0F11165g, similar to Saccharomyces cerevisiae SIF2 (YBR103W); ancestral locus Anc_3.344, weakly similar to uniprot|P38262 Saccharomyces cerevisiae YBR103w SIF2 SIR4P interacting protein and EHA- IPF7783.1
YALI1_F14827g	Compare to YALI0F11187g, no similarity
YALI1_F14850g	Compare to YALI0F11209g, no similarity
YALI1_F14882g	Compare to YALI0F11231g, similar to uniprot|P04801 Saccharomyces cerevisiae YIL078w THS1 threonyl tRNA synthetase
YALI1_F14900g	Compare to YALI0F11253g, similar to Saccharomyces cerevisiae SQS1 (YNL224C); ancestral locus Anc_2.17, weakly similar to uniprot|P53866 Saccharomyces cerevisiae YNL224c and DEHA0A08008g Debaryomyces hansenii
YALI1_F14933g	Compare to YALI0F11275g, similar to uniprot|Q9P457 Candida albicans Cu- binding metallothionein
YALI1_F14958g	Compare to YALI0F11297g, similar to uniprot|P53045 Saccharomyces cerevisiae YGR060w and DEHA0A12661g Debaryomyces hansenii
YALI1_F15017g	Compare to YALI0F11319g, weakly similar to uniprot|P25648 Saccharomyces cerevisiae YCR081w and DEHA0C09911g Debaryomyces hansenii, similar to Saccharomyces cerevisiae SRB8 (YCR081W); ancestral locus Anc_6.356, no similarity
YALI1_F15038g	Compare to YALI0F11363g, weakly similar to uniprot|Q06485 Saccharomyces cerevisiae YLR356w, similar to Saccharomyces cerevisiae SCM4 (YGR049W) and YLR356W; ancestral locus Anc_4.191
YALI1_F15070g	Compare to YALI0F11385g, some similarities with uniprot|P38691 Saccharomyces cerevisiae YHR082c KSP1 ser/thr protein kinase, similar to Saccharomyces cerevisiae YGR052W; ancestral locus Anc_4.192
YALI1_F15108g	Compare to YALI0F11407g, no similarity
YALI1_F15141g	Compare to YALI0F11429g, weakly similar to uniprot|Q9P8F7 Yarrowia lipolytica Triacylglycerol lipase precursor (EC 3.1.1.3) and uniprot|P47145 Saccharomyces cerevisiae YJR107w
YALI1_F15186g	Compare to YALI0F11473g, highly similar to uniprot|P39076 Saccharomyces cerevisiae YIL142w CCT2 chaperonin of the TCP1 ring complex
YALI1_F15218g	Compare to YALI0F11487g, weakly similar to uniprot|P32432 Saccharomyces cerevisiae YLR403w SFP1 zinc finger protein, similar to Saccharomyces cerevisiae SFP1 (YLR403W); ancestral locus Anc_4.265
YALI1_F15265g	Compare to YALI0F11517g, no similarity
YALI1_F15291g	Compare to YALI0F11539g, no similarity
YALI1_F15311g	Compare to YALI0F11561g, similar to Saccharomyces cerevisiae SFT2 (YBL102W); ancestral locus Anc_7.437, similar to uniprot|P38166 Saccharomyces cerevisiae YBL102w and DEHA0G16038g Debaryomyces hansenii
YALI1_F15334g	Compare to YALI0F11583g, similar to uniprot|P06700 Saccharomyces cerevisiae YDL042c and DEHA0E14146g Debaryomyces hansenii
YALI1_F15352g	Compare to YALI0F11605g, weakly similar to uniprot|Q6CGW9 Yarrowia lipolytica YALI0A15400g
YALI1_F15357g	Compare to YALI0F11616g, gnl|GLV|YALI0F11616g [Yarrowia lipolytica] weakly similar to uniprot|Q8TGJ7 Saccharomyces cerevisiae YLL066W-B
YALI1_F15367g	Compare to YALI0F11627g, similar to DEHA0E08085g Debaryomyces hansenii
YALI1_F15403g	Compare to YALI0F11649g, similar to Saccharomyces cerevisiae GPI18 (YBR004C); ancestral locus Anc_3.201, similar to uniprot|P38211 Saccharomyces cerevisiae YBR004c
YALI1_F15418g	Compare to YALI0F11671g, no similarity
YALI1_F15449g	Compare to YALI0F11693g, some similarities with uniprot|Q9PTY5 Xenopus laevis RanBPM protein RANBPM gene, similar to Saccharomyces cerevisiae VID30 (YGL227W); ancestral locus Anc_3.544
YALI1_F15466g	Compare to YALI0F11715g, no similarity
YALI1_F15477g	Compare to YALI0F11737g, similar to uniprot|Q6CHL0 Yarrowia lipolytica YALI0A07755g
YALI1_F15517g	Compare to YALI0F11759g, highly similar to uniprot|P39954 Saccharomyces cerevisiae YER043c, similar to Saccharomyces cerevisiae SAH1 (YER043C); ancestral locus Anc_3.545
YALI1_F15533g	Compare to YALI0F11781g, similar to Saccharomyces cerevisiae YDR051C; ancestral locus Anc_3.287, similar to uniprot|Q99288 Saccharomyces cerevisiae YDR051c
YALI1_F15568g	Compare to YALI0F11803g, uniprot|Q9UR74 and uniprot|Q9URG4 Yarrowia lipolytica similar to uniprot|P00729 Saccharomyces cerevisiae YMR297w PRC1 carboxypeptidase y serine-type protease
YALI1_F15641g	Compare to YALI0F11825g, weakly similar to uniprot|P36033 Saccharomyces cerevisiae YKL220c and DEHA0C07007g Debaryomyces hansenii
YALI1_F15692g	Compare to YALI0F11847g, no similarity, similar to Saccharomyces cerevisiae YFR039C and SHE10 (YGL228W); ancestral locus Anc_3.546
YALI1_F15708g	Compare to YALI0F11869g, similar to Saccharomyces cerevisiae SAP155 (YFR040W) and SAP4 (YGL229C); ancestral locus Anc_3.547, similar to uniprot|P36123 Saccharomyces cerevisiae YKR028w
YALI1_F15745g	Compare to YALI0F11891g, weakly similar to uniprot|P43613 Saccharomyces cerevisiae YFR041c and DEHA0G20449g Debaryomyces hansenii, similar to Saccharomyces cerevisiae ERJ5 (YFR041C); ancestral locus Anc_3.548
YALI1_F15769g	Compare to YALI0F11913g, similar to uniprot|P06783 Saccharomyces cerevisiae YKL178c STE3 pheromone a-factor receptor and LLA- IPF8120. 1, similar to Saccharomyces cerevisiae STE3 (YKL178C); ancestral locus Anc_1.167
YALI1_F15781g	Compare to YALI0F11935g, similar to uniprot|P40857 Saccharomyces cerevisiae YJL097w and DEHA0C18733g Debaryomyces hansenii, similar to Saccharomyces cerevisiae PHS1 (YJL097W); ancestral locus Anc_1.269
YALI1_F15793g	Compare to YALI0F11957g, similar to Saccharomyces cerevisiae EMI5 (YOL071W); ancestral locus Anc_3.144, similar to uniprot|Q08230 Saccharomyces cerevisiae YOL071w
YALI1_F15817g	Truncated form of YALI0F11979g, some similarities with KLLA0E06479g Kluyveromyces lactis, similar to Saccharomyces cerevisiae RTG1 (YOL067C); ancestral locus Anc_3.152
YALI1_F15827g	Truncated form of YALI0F11979g, some similarities with KLLA0E06479g Kluyveromyces lactis
YALI1_F15859g	Compare to YALI0F12001g, similar to uniprot|P53173 Saccharomyces cerevisiae YGL054c ERV14 ER-derived Vesicles, similar to Saccharomyces cerevisiae ERV15 (YBR210W) and ERV14 (YGL054C); ancestral locus Anc_6.102
YALI1_F15878g	Compare to YALI0F12023g, no similarity
YALI1_F15886g	Compare to YALI0F12045g, no similarity
YALI1_F15905g	Compare to YALI0F12067g, weakly similar to uniprot|Q7SDB1 Neurospora crassa NCU02099.1 predicted protein
YALI1_F15961g	Compare to YALI0F12089g, similar to uniprot|P39109 Saccharomyces cerevisiae YDR135c YCF1 glutathione S-conjugate transporter vacuolar
YALI1_F15990g	Compare to YALI0F12111g, similar to uniprot|P40564 Saccharomyces cerevisiae YIR004w and DEHA0E03685g Debaryomyces hansenii
YALI1_F16005g	Compare to YALI0F12133g, no similarity
YALI1_F16035g	Truncated form of YALI0F12155g, highly similar to uniprot|P25694 Saccharomyces cerevisiae YDL126c and DEHA0G15994g Debaryomyces hansenii
YALI1_F16045g	Compare to YALI0F12177g, similar to Saccharomyces cerevisiae INP54 (YOL065C); ancestral locus Anc_3.155, weakly similar to uniprot|Q08227 Saccharomyces cerevisiae YOL065c and KLLA0F24772g Kluyveromyces lactis
YALI1_F16069g	Compare to YALI0F12199g, similar to Saccharomyces cerevisiae PUS9 (YDL036C) and RIB2 (YOL066C); ancestral locus Anc_3.154, similar to uniprot|Q12362 Saccharomyces cerevisiae YOL066c
YALI1_F16117g	Compare to YALI0F12221g, similar to uniprot|P12945 Saccharomyces cerevisiae YDL040c, similar to Saccharomyces cerevisiae NAT1 (YDL040C); ancestral locus Anc_3.153
YALI1_F16158g	Compare to YALI0F12243g, similar to Saccharomyces cerevisiae YJR056C; ancestral locus Anc_1.502, some similarities with uniprot|P47115 Saccharomyces cerevisiae YJR056c hypothetical protein
YALI1_F16270g	Compare to YALI0F12287g, some similarities with DEHA0F16368g Debaryomyces hansenii
YALI1_F16478g	Compare to YALI0F12331g, weakly similar to uniprot|P40169 Saccharomyces cerevisiae YNL194c
YALI1_F16568g	Compare to YALI0F12353g, similar to uniprot|O88696 Mus musculus putative ATP- dependent Clp protease proteolytic subunit mitochondrial precursor
YALI1_F16600g	Compare to YALI0F12375g, some similarities with uniprot|P34761 Saccharomyces cerevisiae YNL197c, similar to Saccharomyces cerevisiae WHI4 (YDL224C) and WHI3 (YNL197C); ancestral locus Anc_2.52
YALI1_F16614g	Compare to YALI0F12397g, uniprot|Q9UVF6 Yarrowia lipolytica Pal2 protein involved in pH sensing mating and meiosis
YALI1_F16656g	Compare to YALI0F12463g, similar to uniprot|P33416 Saccharomyces cerevisiae YDR258c
YALI1_F16702g	Compare to YALI0F12507g, weakly similar to CA4690|IPF3959 Candida albicans
YALI1_F16717g	Compare to YALI0F12529g, weakly similar to uniprot|Q04179 Saccharomyces cerevisiae YDR400w URH1 uridine ribohydrolase
YALI1_F16743g	Compare to YALI0F12551g, similar to uniprot|P35191 Saccharomyces cerevisiae YFL016c
YALI1_F16796g	Compare to YALI0F12573g, some similarities with uniprot|Q03761 Saccharomyces cerevisiae YDR145w TAF61 TFIID and SAGA
YALI1_F16856g	Compare to YALI0F12595g, weakly similar to uniprot|CAD70921 Neurospora crassa 7F4.170 Related to acid sphingomyelinase
YALI1_F16915g	Compare to YALI0F12617g, some similarities with DEHA0E16269g Debaryomyces hansenii
YALI1_F16984g	Compare to YALI0F12639g, similar to Saccharomyces cerevisiae ARO1 (YDR127W); ancestral locus Anc_8.287, similar to uniprot|P08566 Saccharomyces cerevisiae YDR127W Pentafunctional AROM polypeptide
YALI1_F17004g	Compare to YALI0F12661g, similar to Saccharomyces cerevisiae MAK11 (YKL021C); ancestral locus Anc_2.663, weakly similar to uniprot|P20484 Saccharomyces cerevisiae YKL021C MAK11 protein
YALI1_F17025g	Compare to YALI0F12683g, weakly similar to uniprot|P06787 Saccharomyces cerevisiae YBR109c CMD1 calmodulin, similar to Saccharomyces cerevisiae MLC2 (YPR188C); ancestral locus Anc_7.545
YALI1_F17034g	Compare to YALI0F12705g, no similarity
YALI1_F17066g	Compare to YALI0F12727g, similar to Saccharomyces cerevisiae PPT1 (YGR123C); ancestral locus Anc_3.481, some similarities with uniprot|Q8W378 Oryza sativa Putative tetratricopeptide repeat protein and Neurospora crassa NCU08664.1 predicted protein
YALI1_F17082g	Compare to YALI0F12749g, similar to uniprot|Q03529 Saccharomyces cerevisiae YMR272c SCS7 required for hydroxylation of ceramide
YALI1_F17103g	Compare to YALI0F12771g, some similarities with uniprot|Q12400 Saccharomyces cerevisiae Chromosome XV reading frame ORF YOL093W, similar to Saccharomyces cerevisiae TRM10 (YOL093W); ancestral locus Anc_3.104
YALI1_F17138g	Compare to YALI0F12793g, similar to Saccharomyces cerevisiae ZDS2 (YML109W) and ZDS1 (YMR273C); ancestral locus Anc_8.831, some similarities with uniprot|P50111 Saccharomyces cerevisiae YMR273C ZDS1 protein (NRC1 protein) (RT2GS1)
YALI1_F17203g	Compare to YALI0F12815g, some similarities with uniprot|P41895 Saccharomyces cerevisiae YGR186w TFG1 TFIIF subunit (transcription initiation factor) 105 kD, similar to Saccharomyces cerevisiae TFG1 (YGR186W); ancestral locus Anc_5.193
YALI1_F17265g	Compare to YALI0F12837g, no similarity
YALI1_F17337g	Compare to YALI0F12925g, similar to uniprot|P41948 Saccharomyces cerevisiae YNL142w MEP2 high affinity low capacity ammonia permease
YALI1_F17369g	Compare to YALI0F12947g, weakly similar to uniprot|O13827 Schizosaccharomyces pombe Hypothetical protein C19A8.11c in chromosome I
YALI1_F17383g	Compare to YALI0F12969g, similar to Saccharomyces cerevisiae SEC15 (YGL233W); ancestral locus Anc_3.554, weakly similar to uniprot|P22224 Saccharomyces cerevisiae YGL233w SEC15 vesicular traffic control protein
YALI1_F17431g	Compare to YALI0F12991g, some similarities with uniprot|P32902 Saccharomyces cerevisiae YHL004w MRP4 ribosomal protein of the small subunit mitochondrial, similar to Saccharomyces cerevisiae MRP4 (YHL004W); ancestral locus Anc_2.500
YALI1_F17472g	Compare to YALI0F13013g, similar to uniprot|Q873H2 Neurospora crassa NCU03388.1 hypothetical protein
YALI1_F17491g	Compare to YALI0F13035g, similar to Saccharomyces cerevisiae YOL114C; ancestral locus Anc_3.59, weakly similar to uniprot|Q12322 Saccharomyces cerevisiae YOL114c
YALI1_F17496g	Compare to YALI0F13057g, weakly similar to wi|NCU00592.1 Neurospora crassa NCU00592.1 hypothetical protein, similar to Saccharomyces cerevisiae CWC25 (YNL245C); ancestral locus Anc_1.117
YALI1_F17520g	Compare to YALI0F13068g, gnl|GLV|YALI0F13068g [Yarrowia lipolytica] weakly similar to gb|EAS30519.1 Coccidioides immitis
YALI1_F17522g	Compare to YALI0F13079g, no similarity
YALI1_F17547g	Compare to YALI0F13101g, similar to uniprot|P53188 Saccharomyces cerevisiae YGL029w CGR1 Coiled-coil protein
YALI1_F17549g	Compare to YALI0F13123g, weakly similar to uniprot|P78955 Schizosaccharomyces pombe Protein hus1
YALI1_F17569g	Compare to YALI0F13145g, similar to uniprot|Q96VC8 Yarrowia lipolytica Glyoxylate pathway regulator
YALI1_F17603g	Compare to YALI0F13167g, similar to Saccharomyces cerevisiae IES1 (YFL013C); ancestral locus Anc_8.64, some similarities with wi|NCU01362.1 Neurospora crassa NCU01362.1 hypothetical protein
YALI1_F17637g	Compare to YALI0F13189g, similar to Saccharomyces cerevisiae KEX2 (YNL238W); ancestral locus Anc_2.6, uniprot|P42781 Yarrowia lipolytica Dibasic processing endoprotease precursor
YALI1_F17657g	Compare to YALI0F13211g, weakly similar to uniprot|P35688 Saccharomyces cerevisiae YDL240W LRG1 protein, similar to Saccharomyces cerevisiae LRG1 (YDL240W); ancestral locus Anc_2.2
YALI1_F17706g	Compare to YALI0F13233g, some similarities with uniprot|Q12297 Saccharomyces cerevisiae YPL011c TAF47 component of the TBP-associated protein complex, similar to Saccharomyces cerevisiae TAF3 (YPL011C); ancestral locus Anc_8.77
YALI1_F17709g	Compare to YALI0F13255g, similar to Saccharomyces cerevisiae RET3 (YPL010W); ancestral locus Anc_8.76, similar to uniprot|P53600 Saccharomyces cerevisiae YPL010w RET3 coatomer complex zeta chain
YALI1_F17756g	Compare to YALI0F13277g, similar to Saccharomyces cerevisiae YPL009C; ancestral locus Anc_8.75, similar to wi|NCU09191.1 Neurospora crassa NCU09191. 1 hypothetical protein
YALI1_F17788g	Compare to YALI0F13299g, weakly similar to uniprot|Q96W35 Ophiostoma novo- ulmi Glucan 1 3 beta-glucosidase-like protein (Fragment)
YALI1_F17805g	Compare to YALI0F13321g, some similarities with uniprot|Q7RXD3 Neurospora crassa NCU05051.1 hypothetical protein
YALI1_F17836g	Compare to YALI0F13343g, weakly similar to uniprot|P08964 Saccharomyces cerevisiae YHR023w MYO1 myosin-1 isoform (type II myosin) heavy chain
YALI1_F17907g	Compare to YALI0F13354g, gnl|GLV|YALI0F13354g [Yarrowia lipolytica] similar to uniprot|P32914 Saccharomyces cerevisiae YGR063C transcription initiation protein SPT4, similar to Saccharomyces cerevisiae SPT4 (YGR063C); ancestral locus Anc_4.210
YALI1_F17912g	Compare to YALI0F13365g, weakly similar to DEHA0G21307g Debaryomyces hansenii
YALI1_F17930g	Compare to YALI0F13387g, weakly similar to uniprot|P53239 Saccharomyces cerevisiae YGR062c COX18 required for activity of mitochondrial cytochrome oxidase, similar to Saccharomyces cerevisiae COX18 (YGR062C); ancestral locus Anc_4.209
YALI1_F17949g	Compare to YALI0F13409g, similar to uniprot|P11914 Saccharomyces cerevisiae YHR024c MAS2 processing peptidase catalytic 53kDa (alpha) subunit mitochondrial, similar to Saccharomyces cerevisiae MAS2 (YHR024C); ancestral locus Anc_5.268
YALI1_F17953g	Compare to YALI0F13431g, no similarity
YALI1_F17962g	Compare to YALI0F13453g, highly similar to uniprot|P17423 Saccharomyces cerevisiae YHR025w THR1 homoserine kinase and KLLA0E11528g Kluyveromyces lactis and CAGL0J00649g Candida glabrata, similar to Saccharomyces cerevisiae THR1 (YHR025W); ancestral locus Anc_5.269
YALI1_F17988g	Compare to YALI0F13475g, similar to uniprot|P27476 Saccharomyces cerevisiae YGR159c NSR1 nuclear localization sequence binding protein
YALI1_F18023g	Compare to YALI0F13497g, similar to Saccharomyces cerevisiae CTH1 (YDR151C) and TIS11 (YLR136C); ancestral locus Anc_8.333, some similarities with uniprot|P47977 Saccharomyces cerevisiae YLR136c TIS11 tRNA-specific adenosine deaminase 3
YALI1_F18081g	Compare to YALI0F13519g, weakly similar to uniprot|P52593 Saccharomyces cerevisiae YML103c NUP188 nuclear pore protein, similar to Saccharomyces cerevisiae NUP188 (YML103C); ancestral locus Anc_8.821
YALI1_F18105g	Compare to YALI0F13541g, highly similar to uniprot|P00817 Saccharomyces cerevisiae YBR011c IPP1 inorganic pyrophosphatase cytoplasmic, similar to Saccharomyces cerevisiae PPA2 (YMR267W); ancestral locus Anc_8.820
YALI1_F18122g	Compare to YALI0F13585g, weakly similar to uniprot|Q12242 Saccharomyces cerevisiae YOR138c
YALI1_F18152g	Compare to YALI0F13607g, similar to uniprot|P39709 Saccharomyces cerevisiae YAL067c SEO1 suppressor of sulfoxyde ethionine resistance
YALI1_F18202g	Compare to YALI0F13629g, uniprot|Q7Z8J5 Yarrowia lipolytica MAP kinase kinase kinase some similarities with uniprot|P23561 Saccharomyces cerevisiae YLR362w STE11 ser/thr protein kinase of the MEKK family
YALI1_F18239g	Compare to YALI0F13651g, weakly similar to uniprot|Q9H841 Homo sapiens Hypothetical protein FLJ13955
YALI1_F18276g	Compare to YALI0F13673g, no similarity, similar to Saccharomyces cerevisiae FUS2 (YMR232W); ancestral locus Anc_8.762
YALI1_F18357g	Compare to YALI0F13695g, no similarity
YALI1_F18381g	Compare to YALI0F13717g, similar to Saccharomyces cerevisiae SSD1 (YDR293C); ancestral locus Anc_5.307, similar to uniprot|P24276 Saccharomyces cerevisiae YDR293c SSD1 involved in the tolerance to high concentration of Ca2
YALI1_F18429g	Compare to YALI0F13739g, similar to uniprot|P38776 Saccharomyces cerevisiae YHR048w
YALI1_F18459g	Compare to YALI0F13761g, highly similar to uniprot|Q6C6X1 Yarrowia lipolytica YALI0E05577g
YALI1_F18524g	Compare to YALI0F13783g, similar to uniprot|P10964 Saccharomyces cerevisiae YOR341w RPA190 DNA-directed RNA polymerase I 190 KD alpha subunit, similar to Saccharomyces cerevisiae RPA190 (YOR341W); ancestral locus Anc_7.51
YALI1_F18550g	Compare to YALI0F13805g, no similarity, similar to Saccharomyces cerevisiae SLI15 (YBR156C); ancestral locus Anc_8.507
YALI1_F18696g	Compare to YALI0F13849g, no similarity
YALI1_F18740g	Compare to YALI0F13937g, highly similar to uniprot|O93968 Candida boidinii Formate dehydrogenase or uniprot|O13437 Candida boidinii NAD- dependent formate dehydrogenase
YALI1_F18766g	Compare to YALI0F13959g, similar to uniprot|Q06593 Saccharomyces cerevisiae YPR194c OPT2
YALI1_F18835g	Compare to YALI0F13981g, similar to uniprot|P53389 Saccharomyces cerevisiae YNR055c HOL1 member of major facilitator superfamily multidrug-resistance protein subfamily 1
YALI1_F18857g	Truncated form of YALI0F14003g, no similarity
YALI1_F18897g	Compare to YALI0F14025g, weakly similar to uniprot|Q12494 Saccharomyces cerevisiae YDR017c KCS1 potential transcription factor of the BZIP type
YALI1_F18920g	Compare to YALI0F14047g, similar to uniprot|P50867 Emericella nidulans Cysteine synthase
YALI1_F18943g	Compare to YALI0F14069g, highly similar to uniprot|P48580 Neurospora crassa Serine/threonine protein phosphatase PP2A catalytic subunit (EC 3.1.3.16)
YALI1_F18947g	Compare to YALI0F14091g, no similarity possibly noncoding
YALI1_F18979g	Compare to YALI0F14113g, similar to uniprot|O74207 Candida albicans Phospholipase B
YALI1_F19007g	Compare to YALI0F14135g, similar to CA4251|IPF4291 Candida albicans IPF4291 unknown function
YALI1_F19015g	Compare to YALI0F14157g, no similarity
YALI1_F19047g	Compare to YALI0F14179g, similar to uniprot|P28742 Saccharomyces cerevisiae YBL063w KIP1 kinesin-related protein
YALI1_F19058g	Compare to YALI0F14201g, similar to uniprot|O14141 Schizosaccharomyces pombe Hypothetical protein C3G6.03c in chromosome I, similar to Saccharomyces cerevisiae YOR111W; ancestral locus Anc_2.168
YALI1_F19090g	Compare to YALI0F14223g, similar to uniprot|P40035 Saccharomyces cerevisiae YER053c related to mitochondrial phosphate carrier protein, similar to Saccharomyces cerevisiae PIC2 (YER053C); ancestral locus Anc_7.228
YALI1_F19106g	Compare to YALI0F14245g, similar to uniprot|O74978 Schizosaccharomyces pombe Putative RNA-binding protein
YALI1_F19126g	Compare to YALI0F14267g, similar to Saccharomyces cerevisiae AGE2 (YIL044C); ancestral locus Anc_7.227, some similarities with uniprot|Q9UT34 Schizosaccharomyces pombe Putative GTPase activating protein
YALI1_F19140g	Compare to YALI0F14289g, no similarity
YALI1_F19153g	Compare to YALI0F14311g, weakly similar to uniprot|Q7S922 Neurospora crassa NCU07963.1 predicted protein
YALI1_F19169g	Compare to YALI0F14333g, similar to DEHA0D13618g Debaryomyces hansenii IPF 3158.1, similar to Saccharomyces cerevisiae YMR155W; ancestral locus Anc_2.363
YALI1_F19180g	Compare to YALI0F14355g, similar to Saccharomyces cerevisiae TFA2 (YKR062W); ancestral locus Anc_1.202, weakly similar to uniprot|P36145 Saccharomyces cerevisiae YKR062W transcription initiation factor IIE beta subunit (TFIIE-beta) (Factor A 43 kDa subunit)
YALI1_F19192g	Compare to YALI0F14377g, similar to Saccharomyces cerevisiae UTP6 (YDR449C); ancestral locus Anc_5.564, similar to uniprot|Q02354 Saccharomyces cerevisiae YDR449c Hypothetical 52.4 kDa protein
YALI1_F19216g	Compare to YALI0F14399g, weakly similar to CA3343|IPF13360 Candida albicans IPF13360 unknown function
YALI1_F19218g	Compare to YALI0F14421g, similar to uniprot|Q7S0R9 Neurospora crassa NCU09014.1 hypothetical protein
YALI1_F19244g	Compare to YALI0F14443g, similar to Saccharomyces cerevisiae ADA2 (YDR448W); ancestral locus Anc_5.563, similar to uniprot|Q02336 Saccharomyces cerevisiae YDR448w ADA2 general transcriptional adaptor or co- activator
YALI1_F19249g	Compare to YALI0F14465g, similar to Saccharomyces cerevisiae RPS17B (YDR447C) and RPS17A (YML024W); ancestral locus Anc_5.562, highly similar to uniprot|P14127 Saccharomyces cerevisiae YDR447c RP51B ribosomal protein S17.e.B or uniprot|P02407 Saccharomyces cerevisiae YML024w RP51A ribosomal protein S17.e.A
YALI1_F19268g	Compare to YALI0F14487g, similar to Saccharomyces cerevisiae GIS1 (YDR096W) and RPH1 (YER169W); ancestral locus Anc_8.234, some similarities with wi|NCU03505.1 Neurospora crassa NCU03505.1 hypothetical protein
YALI1_F19345g	Compare to YALI0F14509g, similar to Saccharomyces cerevisiae YKL050C and YMR031C; ancestral locus Anc_2.590, some similarities with uniprot|Q05050 Saccharomyces cerevisiae YMR031c or uniprot|P35736 Saccharomyces cerevisiae YKL050c
YALI1_F19370g	Compare to YALI0F14531g, no similarity,ancestral locus Anc_1.258
YALI1_F19381g	Compare to YALI0F14553g, similar to uniprot|Q9USQ7 Schizosaccharomyces pombe Conserved hypothetical protein, similar to Saccharomyces cerevisiae YLR143W; ancestral locus Anc_8.349
YALI1_F19478g	Truncated form of YALI0F14575g, similar to Saccharomyces cerevisiae PSE1 (YMR308C); ancestral locus Anc_5.11, similar to uniprot|P32337 Saccharomyces cerevisiae YMR308c PSE1 beta karyopherin
YALI1_F19500g	Truncated form of YALI0F14597g, similar to uniprot|Q8NJ14 Neurospora crassa related to SYG1 protein
YALI1_F19556g	Compare to YALI0F14619g, no similarity, similar to Saccharomyces cerevisiae KRE1 (YNL322C); ancestral locus Anc_3.18
YALI1_F19579g	Compare to YALI0F14641g, no similarity
YALI1_F19610g	Compare to YALI0F14685g, some similarities with CA2588|IPF15098 Candida albicans IPF15098 Unknown function
YALI1_F19635g	Compare to YALI0F14707g, weakly similar to uniprot|P43565 Saccharomyces cerevisiae YFL033c RIM15 protein kinase involved in expression of meiotic genes
YALI1_F19697g	Compare to YALI0F14729g, similar to uniprot|Q9C3Z1 Cochliobolus heterostrophus peroxisomal Acyl-CoA thioesterase
YALI1_F19717g	Compare to YALI0F14751g, no similarity
YALI1_F19720g	Compare to YALI0F14773g, weakly similar to uniprot|P54790 Saccharomyces cerevisiae YLL004w ORC3 origin recognition complex 62 kDa subunit, similar to Saccharomyces cerevisiae ORC3 (YLL004W); ancestral locus Anc_5.213
YALI1_F19746g	Compare to YALI0F14795g, weakly similar to uniprot|P41543 Saccharomyces cerevisiae YJL002c OST1 oligosaccharyltransferase alpha subunit, similar to Saccharomyces cerevisiae OST1 (YJL002C); ancestral locus Anc_5.214
YALI1_F19764g	Compare to YALI0F14817g, weakly similar to uniprot|O13652 Schizosaccharomyces pombe Hypothetical 102.0 kDa protein (PI059 protein)
YALI1_F19805g	Compare to YALI0F14839g, similar to uniprot|O94236 Schizosaccharomyces pombe Eukaryotic translation initiation factor 3 subunit 7 homolog (Microtubule destabilizing protein moe1)
YALI1_F19811g	Compare to YALI0F14861g, similar to Saccharomyces cerevisiae PRE3 (YJL001W); ancestral locus Anc_5.216, highly similar to uniprot|P38624 Saccharomyces cerevisiae YJL001w PRE3 20S proteasome subunit (beta1)
YALI1_F19841g	Compare to YALI0F14883g, no similarity
YALI1_F19853g	Compare to YALI0F14905g, similar to Saccharomyces cerevisiae YCL012C; ancestral locus Anc_1.407, similar to uniprot|Q7SBB4 Neurospora crassa NCU06209.1 hypothetical protein
YALI1_F19899g	Compare to YALI0F14927g, similar to uniprot|P53008 Saccharomyces cerevisiae YGL027c CWH41 ER glucosidase I, similar to Saccharomyces cerevisiae CWH41 (YGL027C); ancestral locus Anc_4.90
YALI1_F19938g	Compare to YALI0F14949g, similar to uniprot|P38279 Saccharomyces cerevisiae YBR147w, similar to Saccharomyces cerevisiae YBR147W and YOL092W; ancestral locus Anc_3.105
YALI1_F20010g	Compare to YALI0F14971g, no similarity possibly noncoding
YALI1_F20047g	Compare to YALI0F14993g, no similarity possibly noncoding
YALI1_F20059g	Compare to YALI0F15015g, no similarity possibly noncoding
YALI1_F20086g	Compare to YALI0F15037g, similar to Saccharomyces cerevisiae TBS1 (YBR150C) and HAL9 (YOL089C); ancestral locus Anc_3.109, no similarity
YALI1_F20123g	Compare to YALI0F15059g, weakly similar to DEHA0F02310g Debaryomyces hansenii IPF 8942.1
YALI1_F20168g	Compare to YALI0F15081g, weakly similar to CA4661|IPF6561 Candida albicans IPF6561 unknown function, similar to Saccharomyces cerevisiae SOG2 (YOR353C); ancestral locus Anc_7.39
YALI1_F20177g	Compare to YALI0F15103g, no similarity
YALI1_F20233g	Compare to YALI0F15125g, some similarities with uniprot|P34226 Saccharomyces cerevisiae YBL061c SKT5 protoplast regeneration and killer toxin resistance protein, similar to Saccharomyces cerevisiae YDL203C; ancestral locus Anc_8.452
YALI1_F20330g	Compare to YALI0F15147g, some similarities with uniprot|P32580 Saccharomyces cerevisiae YPL029W ATP-dependent RNA helicase SUV3 mitochondrial precursor, similar to Saccharomyces cerevisiae SUV3 (YPL029W); ancestral locus Anc_8.480
YALI1_F20378g	Compare to YALI0F15169g, some similarities with uniprot|Q9HF02 Penicillium marneffei Transcription factor AbaA, similar to Saccharomyces cerevisiae TEC1 (YBR083W); ancestral locus Anc_3.310
YALI1_F20426g	Compare to YALI0F15191g, similar to Saccharomyces cerevisiae YPL222W; ancestral locus Anc_6.242, similar to uniprot|Q08968 Saccharomyces cerevisiae YPL222w
YALI1_F20457g	Compare to YALI0F15213g, similar to uniprot|Q7SD63 Neurospora crassa NCU08388.1 hypothetical protein, similar to Saccharomyces cerevisiae CSN12 (YJR084W); ancestral locus Anc_7.452
YALI1_F20462g	Compare to YALI0F15235g, similar to uniprot|Q8TG89 Saccharomyces cerevisiae YGR280C PXR1 involved in maturation of rRNAs and small nucleolar RNAs, similar to Saccharomyces cerevisiae PXR1 (YGR280C); ancestral locus Anc_5.12
YALI1_F20589g	Compare to YALI0F15257g, some similarities with uniprot|P37293 Saccharomyces cerevisiae YGR147c NAT2 N-acetyltransferase for N-terminal methionine, similar to Saccharomyces cerevisiae NAT2 (YGR147C); ancestral locus Anc_4.82
YALI1_F20600g	Compare to YALI0F15279g, similar to uniprot|Q9P6P8 Schizosaccharomyces pombe Putative vesicular transport protein, similar to Saccharomyces cerevisiae YIP4 (YGL198W); ancestral locus Anc_8.158
YALI1_F20616g	Compare to YALI0F15323g, similar to uniprot|Q6CBW2 Yarrowia lipolytica YALI0C15026g
YALI1_F20637g	Compare to YALI0F15345g, similar to Saccharomyces cerevisiae LCB2 (YDR062W); ancestral locus Anc_8.177, similar to uniprot|P40970 Saccharomyces cerevisiae YDR062w LCB2 serine C-palmitoyltransferase subunit
YALI1_F20669g	Compare to YALI0F15367g, some similarities with uniprot|P39944 Saccharomyces cerevisiae YER144c UBP5 ubiquitin-specific protease
YALI1_F20712g	Compare to YALI0F15389g, highly similar to uniprot|P32381 Saccharomyces cerevisiae YDL029w ARP2 actin-like protein
YALI1_F20742g	Compare to YALI0F15411g, similar to CA4398|CaZRT1 Candida albicans CaZRT1 high-affinity zinc transport protein
YALI1_F20788g	Compare to YALI0F15433g, similar to uniprot|P38702 Saccharomyces cerevisiae YHR002w Mitochondrial carrier protein LEU5
YALI1_F20820g	Compare to YALI0F15477g, highly similar to uniprot|P25454 Saccharomyces cerevisiae YER095w RAD51 DNA repair protein
YALI1_F20885g	Compare to YALI0F15543g, no similarity, similar to Saccharomyces cerevisiae RME1 (YGR044C); ancestral locus Anc_4.189
YALI1_F20914g	Compare to YALI0F15587g, similar to Saccharomyces cerevisiae YGR043C and TAL1 (YLR354C); ancestral locus Anc_4.188, highly similar to uniprot|P15019 Saccharomyces cerevisiae YLR354c TAL1 transaldolase
YALI1_F20943g	Compare to YALI0F15609g, similar to DEHA0E09691g Debaryomyces hansenii IPF 12150.1
YALI1_F20965g	Compare to YALI0F15631g, similar to Saccharomyces cerevisiae VMA4 (YOR332W); ancestral locus Anc_7.63, similar to uniprot|O94072 Candida albicans Vacuolar proton pump subunit E
YALI1_F21002g	Compare to YALI0F15653g, some similarities with uniprot|P08640 Saccharomyces cerevisiae YIR019c STA1 extracellular alpha-1 4-glucan glucosidase
YALI1_F21056g	Truncated form of YALI0F15675g, no similarity possibly noncoding
YALI1_F21174g	Compare to YALI0F15697g, similar to uniprot|P35127 Saccharomyces cerevisiae YJR099w YUH1 ubiquitin-specific protease, similar to Saccharomyces cerevisiae YUH1 (YJR099W); ancestral locus Anc_7.470
YALI1_F21192g	Compare to YALI0F15719g, similar to Saccharomyces cerevisiae DCP1 (YOL149W); ancestral locus Anc_3.1, weakly similar to DEHA0A02739g Debaryomyces hansenii IPF 10793.1
YALI1_F21210g	Compare to YALI0F15741g, no similarity
YALI1_F21224g	Compare to YALI0F15763g, weakly similar to uniprot|P50275 Saccharomyces cerevisiae YOR058c ASE1 microtubule-associated protein (nonmotor), similar to Saccharomyces cerevisiae ASE1 (YOR058C); ancestral locus Anc_5.658
YALI1_F21261g	Compare to YALI0F15785g, similar to uniprot|P41896 Saccharomyces cerevisiae YGR005c TFG2 TFIIF subunit (transcription initiation factor) 54 kD, similar to Saccharomyces cerevisiae TFG2 (YGR005C); ancestral locus Anc_4.142
YALI1_F21279g	Compare to YALI0F15807g, similar to Saccharomyces cerevisiae PRP18 (YGR006W); ancestral locus Anc_4.143, weakly similar to uniprot|P33411 Saccharomyces cerevisiae YGR006w PRP18 U5 snRNA-associated protein
YALI1_F21315g	Compare to YALI0F15829g, similar to uniprot|Q08444 Saccharomyces cerevisiae YOR056c, similar to Saccharomyces cerevisiae NOB1 (YOR056C); ancestral locus Anc_5.656
YALI1_F21322g	Compare to YALI0F15851g, some similarities with uniprot|Q08446 Saccharomyces cerevisiae YOR057w SGT1 suppressor of G2 allele of SKP1, similar to Saccharomyces cerevisiae SGT1 (YOR057W); ancestral locus Anc_5.657
YALI1_F21362g	Compare to YALI0F15873g, similar to uniprot|Q06493 Saccharomyces cerevisiae YPR125w MRS7 suppressor of MRS2-1 mutation
YALI1_F21381g	Compare to YALI0F15895g, similar to Saccharomyces cerevisiae SPC34 (YKR037C); ancestral locus Anc_1.246, weakly similar to wi|NCU02221.1 Neurospora crassa NCU02221.1 predicted protein
YALI1_F21396g	Compare to YALI0F15917g, weakly similar to uniprot|Q06563 Saccharomyces cerevisiae YLR251w similarity to peroxisomal rat membrane protein PMP22
YALI1_F21426g	Truncated form of YALI0F15939g, weakly similar to uniprot|P32591 Saccharomyces cerevisiae YJL176c SWI3 transcription regulatory protein
YALI1_F21453g	Compare to YALI0F15961g, no similarity
YALI1_F21467g	Compare to YALI0F15983g, highly similar to uniprot|O93968 Candida boidinii Formate dehydrogenase (EC 1.2.1.2)
YALI1_F21482g	Compare to YALI0F16005g, similar to uniprot|Q7S9Y9 Neurospora crassa NCU07929.1 hypothetical protein
YALI1_F21504g	Compare to YALI0F16027g, similar to uniprot|P22507 Saccharomycopsis fibuligera Beta-glucosidase 2 precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase
YALI1_F21540g	Compare to YALI0F16049g, similar to uniprot|P38238 Saccharomyces cerevisiae Putative ribosomal RNA methyltransferase YBR061c (EC 2.1.1. -) (rRNA (uridine-2 -O-)-methyltransferase)
YALI1_F21547g	Compare to YALI0F16071g, similar to Saccharomyces cerevisiae YAL046C; ancestral locus Anc_7.23, similar to DEHA0F10703g Debaryomyces hansenii IPF 8291.1
YALI1_F21567g	Compare to YALI0F16093g, similar to Saccharomyces cerevisiae CSG2 (YBR036C); ancestral locus Anc_3.227, similar to uniprot|Q7RW58 Neurospora crassa NCU07247.1 hypothetical protein
YALI1_F21583g	Compare to YALI0F16115g, similar to Saccharomyces cerevisiae PRT1 (YOR361C); ancestral locus Anc_7.22, similar to uniprot|P06103 Saccharomyces cerevisiae YOR361c PRT1 translation initiation factor eIF3 subunit
YALI1_F21612g	Compare to YALI0F16137g, similar to Saccharomyces cerevisiae TAN1 (YGL232W); ancestral locus Anc_3.553, weakly similar to uniprot|P53072 Saccharomyces cerevisiae YGL232w
YALI1_F21647g	Compare to YALI0F16159g, some similarities with uniprot|Q12263 Saccharomyces cerevisiae YDR507c GIN4 ser/thr protein kinase
YALI1_F21690g	Compare to YALI0F16181g, similar to Saccharomyces cerevisiae VMA6 (YLR447C); ancestral locus Anc_4.338, highly similar to uniprot|P32366 Saccharomyces cerevisiae YLR447c VMA6 H+-ATPase V0 domain 36 KD subunit
YALI1_F21698g	Compare to YALI0F16203g, similar to Saccharomyces cerevisiae COG8 (YML071C); ancestral locus Anc_4.339, weakly similar to uniprot|Q9P3N9 Neurospora crassa NCU02974.1 hypothetical protein
YALI1_F21728g	Compare to YALI0F16225g, similar to uniprot|Q96VC8 Yarrowia lipolytica Glyoxylate pathway regulator GPR1
YALI1_F21769g	Compare to YALI0F16291g, highly similar to uniprot|P15180 Saccharomyces cerevisiae YDR037w KRS1 lysyl-tRNA synthetase cytosolic
YALI1_F21778g	Compare to YALI0F16313g, some similarities with uniprot|Q07794 Saccharomyces cerevisiae Chromosome XII reading frame ORF YLL002W REM50 drug resistance, similar to Saccharomyces cerevisiae RTT109 (YLL002W); ancestral locus Anc_5.217
YALI1_F21804g	Compare to YALI0F16335g, some similarities with uniprot|P23179 Saccharomyces cerevisiae YHL022c SPO11 catalytic subunit of the meiotic double strand break transesterase, similar to Saccharomyces cerevisiae SPO11 (YHL022C); ancestral locus Anc_7.109
YALI1_F21813g	Compare to YALI0F16357g, similar to Saccharomyces cerevisiae YHL021C; ancestral locus Anc_7.110, weakly similar to DEHA0C03839g Debaryomyces hansenii
YALI1_F21850g	Compare to YALI0F16379g, similar to uniprot|P54861 Saccharomyces cerevisiae YLL001w DNM1 dynamin-related protein
YALI1_F21875g	Compare to YALI0F16401g, weakly similar to uniprot|P22580 Saccharomyces cerevisiae YDR242w AMD2 amidase
YALI1_F21908g	Compare to YALI0F16423g, similar to uniprot|P15365 Saccharomyces cerevisiae YJR152w DAL5 allantoate permease
YALI1_F21974g	Compare to YALI0F16467g, similar to Saccharomyces cerevisiae COG6 (YNL041C); ancestral locus Anc_2.273, weakly similar to uniprot|P53959 Saccharomyces cerevisiae YNL041c COG6 component of the conserved oligomeric Golgi complex
YALI1_F21989g	Compare to YALI0F16489g, similar to uniprot|P27614 Saccharomyces cerevisiae YJL172w CPS1 Gly-X carboxypeptidase YSCS precursor
YALI1_F22073g	Compare to YALI0F16511g, some similarities with DEHA0E11308g Debaryomyces hansenii IPF 12024.1, similar to Saccharomyces cerevisiae XBP1 (YIL101C); ancestral locus Anc_2.274
YALI1_F22115g	Compare to YALI0F16577g, weakly similar to uniprot|P47008 Saccharomyces cerevisiae YJL145w, similar to Saccharomyces cerevisiae SFH5 (YJL145W); ancestral locus Anc_1.205
YALI1_F22171g	Compare to YALI0F16599g, weakly similar to ca|CA3060|CaCTA7 Candida albicans Component of histone deacetylase B and transcriptional regulator of RNA polymerase II
YALI1_F22172g	Compare to YALI0F16621g, no similarity
YALI1_F22219g	Compare to YALI0F16643g, weakly similar to DEHA0G13959g Debaryomyces hansenii IPF 3933.1
YALI1_F22241g	Compare to YALI0F16665g, similar to Saccharomyces cerevisiae SPA2 (YLL021W) and SPH1 (YLR313C); ancestral locus Anc_4.39, some similarities with uniprot|P23201 Saccharomyces cerevisiae YLL021w SPA2 involved in cell polarity
YALI1_F22299g	Compare to YALI0F16687g, similar to Saccharomyces cerevisiae YPR147C; ancestral locus Anc_3.488, weakly similar to uniprot|Q06522 Saccharomyces cerevisiae YPR147c
YALI1_F22321g	Compare to YALI0F16709g, similar to uniprot|P11491 Saccharomyces cerevisiae YDR481c PHO8 repressible alkaline phosphatase vacuolar, similar to Saccharomyces cerevisiae PHO8 (YDR481C); ancestral locus Anc_8.501
YALI1_F22376g	Compare to YALI0F16731g, weakly similar to uniprot|Q06522 Saccharomyces cerevisiae YPR147c
YALI1_F22402g	Compare to YALI0F16753g, weakly similar to uniprot|Q9XYW6 Drosophila melanogaster CHIP protein (RE01069p)
YALI1_F22436g	Compare to YALI0F16819g, highly similar to uniprot|P00925 Saccharomyces cerevisiae YHR174w ENO2 enolase or uniprot|P00924 Saccharomyces cerevisiae YGR254w ENO1 enolase
YALI1_F22481g	Compare to YALI0F16852g, no similarity
YALI1_F22525g	Compare to YALI0F16874g, weakly similar to uniprot|Q7SI58 Neurospora crassa NCU00593.1 hypothetical protein
YALI1_F22568g	Compare to YALI0F16896g, similar to uniprot|P40260 Saccharomyces cerevisiae YGR121c MEP1 ammonia permease of high capacity and moderate affinity or uniprot|P53390 Saccharomyces cerevisiae YPR138c MEP3 low affinity high capacity ammonium permease
YALI1_F22674g	Compare to YALI0F16918g, similar to Saccharomyces cerevisiae SLI1 (YGR212W); ancestral locus Anc_5.119, weakly similar to uniprot|P53304 Saccharomyces cerevisiae hypothetical 54.5 kda protein YGR212w
YALI1_F22750g	Compare to YALI0F16940g, some similarities with uniprot|P35845 Saccharomyces cerevisiae YAR042W SWH1 Protein similar to mammalian oxysterol-binding protein
YALI1_F22784g	Compare to YALI0F16962g, no similarity
YALI1_F22794g	Compare to YALI0F16984g, no similarity
YALI1_F22836g	Compare to YALI0F17006g, similar to Saccharomyces cerevisiae VPS3 (YDR495C); ancestral locus Anc_3.86, some similarities with uniprot|P23643 Saccharomyces cerevisiae YDR495c VPS3 vacuolar sorting protein
YALI1_F22841g	Compare to YALI0F17028g, some similarities with uniprot|Q9P905 Emericella nidulans PalC
YALI1_F22858g	Compare to YALI0F17050g, similar to Saccharomyces cerevisiae APC11 (YDL008W); ancestral locus Anc_3.190, similar to uniprot|Q12157 Saccharomyces cerevisiae YDL008w APC11 subunit of the anaphase promoting complex
YALI1_F22867g	Compare to YALI0F17072g, similar to Saccharomyces cerevisiae HAP3 (YBL021C); ancestral locus Anc_8.167, some similarities with uniprot|P13434 Saccharomyces cerevisiae YBL021c HAP3 CCAAT-binding factor subunit
YALI1_F22883g	Compare to YALI0F17116g, similar to Saccharomyces cerevisiae SGS1 (YMR190C); ancestral locus Anc_6.278, some similarities with uniprot|P35187 Saccharomyces cerevisiae YMR190c SGS1 DNA helicase
YALI1_F22908g	Compare to YALI0F17138g, similar to Saccharomyces cerevisiae DPH5 (YLR172C); ancestral locus Anc_1.387, highly similar to uniprot|P32469 Saccharomyces cerevisiae YLR172c DPH5 diphthamide methyltransferase
YALI1_F22915g	Compare to YALI0F17160g, similar to uniprot|Q6CB47 Yarrowia lipolytica YALI0C21978g
YALI1_F22935g	Compare to YALI0F17182g, weakly similar to uniprot|Q8KCX2 Chlorobium tepidum Hypothetical protein CT1285
YALI1_F22957g	Compare to YALI0F17204g, weakly similar to uniprot|Q9C228 Neurospora crassa Related to CSI2 protein, similar to Saccharomyces cerevisiae PRM5 (YIL117C) and YNL058C; ancestral locus Anc_2.250
YALI1_F22978g	Compare to YALI0F17226g, highly similar to uniprot|Q03667 Saccharomyces cerevisiae YMR002w Hypothetical 16.7 kDa protein in CDC5- MVP1 intergenic region, similar to Saccharomyces cerevisiae MIC17 (YMR002W); ancestral locus Anc_6.34
YALI1_F22993g	Compare to YALI0F17248g, uniprot|Q9UUU1 Yarrowia lipolytica NUCM protein precursor
YALI1_F23024g	Truncated form of YALI0F17270g, similar to uniprot|Q00245 Saccharomyces cerevisiae YIL118w RHO3 GTP-binding protein of the rho family, similar to Saccharomyces cerevisiae RHO3 (YIL118W); ancestral locus Anc_2.249
YALI1_F23047g	Compare to YALI0F17292g, no similarity, similar to Saccharomyces cerevisiae YDJ1 (YNL064C); ancestral locus Anc_2.243
YALI1_F23095g	Compare to YALI0F17336g, no similarity
YALI1_F23109g	Compare to YALI0F17358g, similar to uniprot|Q04373 Saccharomyces cerevisiae YDR496c, similar to Saccharomyces cerevisiae PUF6 (YDR496C); ancestral locus Anc_3.85
YALI1_F23133g	Compare to YALI0F17380g, highly similar to uniprot|P32899 Saccharomyces cerevisiae YHR148w IMP3 component of the U3 small nucleolar ribonucleoprotein, similar to Saccharomyces cerevisiae IMP3 (YHR148W); ancestral locus Anc_5.108
YALI1_F23157g	Compare to YALI0F17402g, weakly similar to uniprot|P46985 Saccharomyces cerevisiae YJL183w MNN11 related to MNN10P and in a complex containing other MNN gene, similar to Saccharomyces cerevisiae MNN11 (YJL183W); ancestral locus Anc_1.156
YALI1_F23191g	Compare to YALI0F17424g, some similarities with uniprot|P12351 Saccharomyces cerevisiae YLR256w CYP1/HAP1 Activator of CYC1 and CYP3 transcription
YALI1_F23214g	Compare to YALI0F17446g, weakly similar to uniprot|Q08777 Saccharomyces cerevisiae Chromosome XV reading frame ORF YOR306C or uniprot|Q08268 Saccharomyces cerevisiae Chromosome XV reading frame ORF YOL119C
YALI1_F23270g	Compare to YALI0F17468g, no similarity
YALI1_F23331g	Compare to YALI0F17490g, similar to uniprot|O74226 Candida albicans Cell wall synthesis protein KRE9 precursor
YALI1_F23351g	Compare to YALI0F17512g, similar to uniprot|P35996 Saccharomyces cerevisiae YKL170w MRPL38 ribosomal protein of the large subunit (L14), similar to Saccharomyces cerevisiae MRPL38 (YKL170W); ancestral locus Anc_1.179
YALI1_F23364g	Compare to YALI0F17534g, highly similar to uniprot|P27999 Saccharomyces cerevisiae YGL070c RPB9 DNA-directed RNA polymerase II 14. 2 KD subunit, similar to Saccharomyces cerevisiae RPB9 (YGL070C); ancestral locus Anc_6.212
YALI1_F23368g	Compare to YALI0F17556g, similar to Saccharomyces cerevisiae MNP1 (YGL068W); ancestral locus Anc_6.213, highly similar to uniprot|P53163 Saccharomyces cerevisiae YGL068W Putative 60S ribosomal protein L7/L12 homolog mitochondrial
YALI1_F23391g	Compare to YALI0F17578g, no similarity
YALI1_F23399g	Compare to YALI0F17600g, similar to Saccharomyces cerevisiae MRP49 (YKL167C); ancestral locus Anc_1.181, weakly similar to uniprot|P32388 Saccharomyces cerevisiae YKL167C 60S ribosomal protein MRP49 mitochondrial precursor
YALI1_F23414g	Compare to YALI0F17622g, some similarities with uniprot|P38961 Saccharomyces cerevisiae YDR083w protein involved in cleavage at site A2 in pre-rRNA in the pathway of ribosomal RNA processing, similar to Saccharomyces cerevisiae RRP8 (YDR083W); ancestral locus Anc_8.215
YALI1_F23441g	Compare to YALI0F17644g, similar to uniprot|P20049 Saccharomyces cerevisiae YBR166c TYR1 prephenate dehydrogenase (NADP), similar to Saccharomyces cerevisiae TYR1 (YBR166C); ancestral locus Anc_8.595
YALI1_F23446g	Compare to YALI0F17666g, similar to uniprot|P40094 Saccharomyces cerevisiae YER157w SEC34 required for vesicle tethering to the yeast Golgi apparatus, similar to Saccharomyces cerevisiae COG3 (YER157W); ancestral locus Anc_8.210
YALI1_F23474g	Compare to YALI0F17688g, similar to uniprot|Q3E7C1 Saccharomyces cerevisiae YDR079C-A, similar to Saccharomyces cerevisiae TFB5 (YDR079C-A); ancestral locus Anc_8.211
YALI1_F23484g	Compare to YALI0F17710g, weakly similar to uniprot|P38959 Saccharomyces cerevisiae YDR080w VPS41 required for the vacuolar assembly, similar to Saccharomyces cerevisiae VPS41 (YDR080W); ancestral locus Anc_8.212
YALI1_F23529g	Compare to YALI0F17732g, weakly similar to uniprot|P46950 Saccharomyces cerevisiae YGR197c SNG1 involved in nitroguanidine resistance or uniprot|P47090 Saccharomyces cerevisiae YJR015w strong similarity to SNG1P
YALI1_F23551g	Compare to YALI0F17754g, no similarity
YALI1_F23595g	Compare to YALI0F17776g, weakly similar to uniprot|P32259 Saccharomyces cerevisiae YNL236w Global transcriptional regulator SIN4, similar to Saccharomyces cerevisiae SIN4 (YNL236W); ancestral locus Anc_2.8
YALI1_F23616g	Compare to YALI0F17798g, similar to Saccharomyces cerevisiae YTP1 (YNL237W); ancestral locus Anc_2.7, weakly similar to uniprot|P53584 Saccharomyces cerevisiae YNL237w YTP1 weak similarity to mitochondrial electron transport proteins
YALI1_F23664g	Compare to YALI0F17820g, similar to Saccharomyces cerevisiae GDH3 (YAL062W) and GDH1 (YOR375C); ancestral locus Anc_7.1, highly similar to uniprot|P39708 Saccharomyces cerevisiae YAL062w GDH3 NADP-glutamate dehydrogenase or uniprot|P07262 Saccharomyces cerevisiae YOR375c GDH1 glutamate dehydrogenase (NADP+)
YALI1_F23706g	Compare to YALI0F17842g, highly similar to uniprot|P43616 Saccharomyces cerevisiae YFR044c Glutamate carboxypeptidase-like protein
YALI1_F23719g	Compare to YALI0F17864g, similar to Saccharomyces cerevisiae CDC33 (YOL139C); ancestral locus Anc_3.20, weakly similar to uniprot|P07260 Saccharomyces cerevisiae YOL139c CDC33 translation initiation factor eIF4E
YALI1_F23784g	Compare to YALI0F17886g, some similarities with uniprot|P43574 Saccharomyces cerevisiae YFL021w GAT1 transcription factor for nitrogen regulation
YALI1_F23819g	Compare to YALI0F17897g, gnl|GLV|YALI0F17897g [Yarrowia lipolytica] similar to uniprot|Q81FK8 Bacillus cereus IAA acetyltransferase
YALI1_F23833g	Compare to YALI0F17908g, some similarities with uniprot|Q01448 Saccharomyces cerevisiae YBR215w HPC2 cell cycle regulatory protein
YALI1_F23867g	Compare to YALI0F17974g, similar to uniprot|Q01532 Saccharomyces cerevisiae YNL239w Cysteine proteinase 1 (EC 3.4.22.40) (Y3) (Bleomycin hydrolase) (BLM hydrolase), similar to Saccharomyces cerevisiae LAP3 (YNL239W); ancestral locus Anc_2.5
YALI1_F23922g	Compare to YALI0F17996g, similar to uniprot|P32568 Saccharomyces cerevisiae YDR011w SNQ2 multidrug resistance protein
YALI1_F23963g	Compare to YALI0F18018g, no similarity
YALI1_F23988g	Compare to YALI0F18040g, weakly similar to uniprot|P87122 Schizosaccharomyces pombe CaCA sodium/calcium exchanger
YALI1_F24031g	Compare to YALI0F18084g, similar to uniprot|Q9P3B9 Neurospora crassa Related to myo-inositol transport protein ITR1
YALI1_F24079g	Compare to YALI0F18106g, similar to uniprot|Q12344 Saccharomyces cerevisiae YPL249c, similar to Saccharomyces cerevisiae GYL1 (YMR192W) and GYP5 (YPL249C); ancestral locus Anc_6.281
YALI1_F24099g	Compare to YALI0F18128g, similar to Saccharomyces cerevisiae SPG5 (YMR191W); ancestral locus Anc_6.280, no similarity
YALI1_F24126g	Compare to YALI0F18150g, similar to uniprot|P36532 Saccharomyces cerevisiae YBR268w MRPL37 ribosomal protein YmL37 mitochondrial, similar to Saccharomyces cerevisiae MRPL37 (YBR268W); ancestral locus Anc_1.318
YALI1_F24130g	Compare to YALI0F18172g, similar to Saccharomyces cerevisiae YDL063C; ancestral locus Anc_4.248, weakly similar to uniprot|Q07395 Saccharomyces cerevisiae ORF YDL063C
YALI1_F24151g	Compare to YALI0F18194g, similar to Saccharomyces cerevisiae SSU72 (YNL222W); ancestral locus Anc_2.19, similar to uniprot|P53538 Saccharomyces cerevisiae YNL222w SSU72 suppressor of cs mutant of SUA7
YALI1_F24171g	Compare to YALI0F18216g, similar to uniprot|P31115 Saccharomyces cerevisiae YFL001w DEG1 Pseudouridylate synthase 3 (EC 4.2.1.70) (Pseudouridine synthase 3) (Depressed growth-RATE protein DEG1)
YALI1_F24173g	Compare to YALI0F18238g, similar to uniprot|P25808 Saccharomyces cerevisiae YFL002c SPB4 ATP-dependent RNA helicase of DEAH box family
YALI1_F24228g	Compare to YALI0F18260g, some similarities with uniprot|Q03973 Saccharomyces cerevisiae YDR174w HMO1 Non-histone protein
YALI1_F24247g	Compare to YALI0F18282g, similar to uniprot|Q8TFK5 Yarrowia lipolytica Cell wall protein CWP1
YALI1_F24270g	Compare to YALI0F18304g, no similarity
YALI1_F24301g	Compare to YALI0F18326g, similar to uniprot|Q6C1S5 Yarrowia lipolytica YALI0F13761g
YALI1_F24332g	Compare to YALI0F18348g, similar to uniprot|P53109 Saccharomyces cerevisiae YGL160w
YALI1_F24343g	Compare to YALI0F18359g, gnl|GLV|YALI0F18359g [Yarrowia lipolytica] NADH-ubiquinone reductase accessory subunit 15 kDA
YALI1_F24359g	Compare to YALI0F18370g, similar to Saccharomyces cerevisiae MSL5 (YLR116W); ancestral locus Anc_8.309, some similarities with uniprot|Q12186 Saccharomyces cerevisiae YLR116w MSL5 branch point bridging protein
YALI1_F24401g	Compare to YALI0F18392g, similar to Saccharomyces cerevisiae CLF1 (YLR117C); ancestral locus Anc_8.310, similar to uniprot|P87312 Schizosaccharomyces pombe Cell cycle control protein cwf4
YALI1_F24408g	Truncated form of YALI0F18403g, highly similar to uniprot|P61864 Saccharomyces cerevisiae YLL039C UBI4 Ubiquitin, similar to Saccharomyces cerevisiae RUB1 (YDR139C); ancestral locus Anc_8.311
YALI1_F24413g	Compare to YALI0F18414g, similar to uniprot|Q03920 Saccharomyces cerevisiae YDR140w, similar to Saccharomyces cerevisiae MTQ2 (YDR140W); ancestral locus Anc_8.312
YALI1_F24469g	Compare to YALI0F18436g, similar to uniprot|Q9Y7B3 Emericella nidulans DopA developmental regulatory gene, similar to Saccharomyces cerevisiae DOP1 (YDR141C); ancestral locus Anc_8.313
YALI1_F24564g	Compare to YALI0F18458g, ancestral locus Anc_1.376, weakly similar to DEHA-IPF8330.1 Debaryomyces hansenii IPF 8330.1
YALI1_F24635g	Compare to YALI0F18480g, uniprot|Q6C182 Yarrowia lipolytica YALI0F18480g YlPEX7
YALI1_F24667g	Compare to YALI0F18502g, similar to uniprot|P23337 Saccharomyces cerevisiae YFR015c GSY1 UDP glucose--starch glucosyltransferase isoform 1 or uniprot|P27472 Saccharomyces cerevisiae YLR258w GSY2 UDP-glucose--starch glucosyltransferase isoform 2, similar to Saccharomyces cerevisiae GSY1 (YFR015C) and GSY2 (YLR258W); ancestral locus Anc_1.375
YALI1_F24699g	Compare to YALI0F18524g, no similarity
YALI1_F24708g	Compare to YALI0F18546g, some similarities with uniprot|Q07834 Saccharomyces cerevisiae ORF YLL032C, similar to Saccharomyces cerevisiae YLL032C; ancestral locus Anc_4.26
YALI1_F24742g	Compare to YALI0F18568g, no similarity
YALI1_F24773g	Compare to YALI0F18590g, similar to uniprot|P14065 Saccharomyces cerevisiae YOR120w GCY1 galactose-induced protein of aldo/keto reductase or uniprot|Q12458 Saccharomyces cerevisiae YDR368w YPR1 strong similarity to members of the aldo/keto reductase family
YALI1_F24798g	Compare to YALI0F18612g, no similarity
YALI1_F24826g	Compare to YALI0F18634g, similar to Saccharomyces cerevisiae DMA1 (YHR115C) and DMA2 (YNL116W); ancestral locus Anc_2.157, some similarities with CA2646|IPF13089 Candida albicans IPF13089 unknown function
YALI1_F24864g	Compare to YALI0F18656g, similar to Saccharomyces cerevisiae YNL115C; ancestral locus Anc_2.158, weakly similar to uniprot|O13912 Schizosaccharomyces pombe Hypothetical protein C23C11.06c
YALI1_F24881g	Compare to YALI0F18678g, similar to uniprot|Q7S4V1 Neurospora crassa NCU02376.1 hypothetical protein
YALI1_F24905g	Compare to YALI0F18700g, highly similar to uniprot|O60191 Pneumocystis carinii CDC2 binding protein SUC1 and uniprot|P20486 Saccharomyces cerevisiae YBR135w CKS1 cyclin-dependent kinases regulatory subunit and DEHA0E23903g Debaryomyces hansenii IPF 11046.1, similar to Saccharomyces cerevisiae CKS1 (YBR135W); ancestral locus Anc_3.400
YALI1_F24929g	Compare to YALI0F18722g, similar to uniprot|P36091 Saccharomyces cerevisiae YKL046c or uniprot|Q05031 Saccharomyces cerevisiae YMR238w DFG5 required for filamentous growth cell polarity and cellular elongation
YALI1_F24963g	Compare to YALI0F18744g, similar to uniprot|Q05131 Saccharomyces cerevisiae YMR034c and DEHA0E11704g Debaryomyces hansenii IPF 11988.1, similar to Saccharomyces cerevisiae YMR034C; ancestral locus Anc_2.594
YALI1_F25001g	Compare to YALI0F18766g, highly similar to uniprot|P02365 Saccharomyces cerevisiae YPL090c RPS10B ribosomal protein S6.e and uniprot|P02365 Saccharomyces cerevisiae YBR181c RPS101 ribosomal protein S6.e, similar to Saccharomyces cerevisiae RPS6B (YBR181C) and RPS6A (YPL090C); ancestral locus Anc_8.567
YALI1_F25035g	Compare to YALI0F18788g, weakly similar to uniprot|Q12224 Saccharomyces cerevisiae YPL089c RLM1 transcription factor of the MADS box family, similar to Saccharomyces cerevisiae SMP1 (YBR182C) and RLM1 (YPL089C); ancestral locus Anc_8.566
YALI1_F25066g	Compare to YALI0F18810g, weakly similar to uniprot|Q09710 Schizosaccharomyces pombe Hypothetical protein C18B11.03c
YALI1_F25079g	Compare to YALI0F18832g, highly similar to uniprot|Q6C4Z6 Yarrowia lipolytica YALI0E22396g
YALI1_F25110g	Compare to YALI0F18854g, similar to Saccharomyces cerevisiae YMR166C; ancestral locus Anc_2.344, similar to uniprot|Q03829 Saccharomyces cerevisiae Putative mitochondrial carrier YMR166C
YALI1_F25164g	Compare to YALI0F18876g, some similarities with uniprot|Q7SCR8 Neurospora crassa NCU09365.1, similar to Saccharomyces cerevisiae YDR374C; ancestral locus Anc_5.446
YALI1_F25182g	Compare to YALI0F18898g, similar to DEHA0G07227g Debaryomyces hansenii IPF 4447.1
YALI1_F25212g	Compare to YALI0F18920g, no similarity
YALI1_F25254g	Compare to YALI0F18942g, similar to uniprot|P38249 Saccharomyces cerevisiae YBR079c RPG1 translation initiation factor eIF3 (p110 subunit), similar to Saccharomyces cerevisiae RPG1 (YBR079C); ancestral locus Anc_3.303
YALI1_F25309g	Compare to YALI0F18964g, similar to uniprot|Q06593 Saccharomyces cerevisiae YPR194c OPT2
YALI1_F25382g	Truncated form of YALI0F19030g, similar to uniprot|Q6CH88 Yarrowia lipolytica YALI0A11198g
YALI1_F25444g	Compare to YALI0F19052g, similar to Saccharomyces cerevisiae HSD1 (YOR311C); ancestral locus Anc_8.788, similar to uniprot|Q12382 Saccharomyces cerevisiae ORF YOR311C
YALI1_F25485g	Compare to YALI0F19074g, similar to Saccharomyces cerevisiae SEC26 (YDR238C); ancestral locus Anc_8.462, similar to uniprot|P41810 Saccharomyces cerevisiae YDR238c SEC26 coatomer complex beta chain of secretory pathway vesicles
YALI1_F25496g	Compare to YALI0F19096g, no similarity
YALI1_F25535g	Truncated form of YALI0F19118g, weakly similar to uniprot|P38731 Saccharomyces cerevisiae YHL040c ARN1 ferrichrome-type siderophore transporter
YALI1_F25546g	Truncated form of YALI0F19118g, weakly similar to uniprot|P38731 Saccharomyces cerevisiae YHL040c ARN1 ferrichrome-type siderophore transporter
YALI1_F25556g	Compare to YALI0F19140g, no similarity
YALI1_F25570g	Compare to YALI0F19162g, no similarity
YALI1_F25587g	Compare to YALI0F19184g, similar to uniprot|P32466 Saccharomyces cerevisiae YDR345c HXT3 low-affinity hexose transporter or uniprot|P23585 Saccharomyces cerevisiae YMR011w HXT2 high- affinity hexose transporter
YALI1_F25614g	Compare to YALI0F19206g, similar to wi|NCU03369.1 Neurospora crassa NCU03369. 1 hypothetical protein
YALI1_F25649g	Compare to YALI0F19228g, weakly similar to uniprot|P39105 Saccharomyces cerevisiae YMR008c PLB1 phospholipase B (lysophospholipase)
YALI1_F25650g	Compare to YALI0F19250g, similar to Saccharomyces cerevisiae DFM1 (YDR411C); ancestral locus Anc_5.513, weakly similar to uniprot|Q12743 Saccharomyces cerevisiae YDR411c
YALI1_F25663g	similar to Saccharomyces cerevisiae VMA9 (YCL005W-A); ancestral locus Anc_1.413
YALI1_F25671g	Compare to YALI0F19272g, similar to Saccharomyces cerevisiae STP22 (YCL008C); ancestral locus Anc_1.412, uniprot|Q6C148 and uniprot|CAD48920 Yarrowia lipolytica YALI0F19272g VSP23 vacuolar protein sorting
YALI1_F25701g	Truncated form of YALI0F19316g, no similarity
YALI1_F25708g	Truncated form of YALI0F19316g, no similarity
YALI1_F25771g	Compare to YALI0F19360g, similar to Saccharomyces cerevisiae SSM4 (YIL030C); ancestral locus Anc_7.198, some similarities with uniprot|P40318 Saccharomyces cerevisiae YIL030c SSM4 involved in mRNA turnover
YALI1_F25792g	Compare to YALI0F19382g, weakly similar to uniprot|Q9C2K7 Neurospora crassa Related to nuclear protein SA-1, similar to Saccharomyces cerevisiae IRR1 (YIL026C); ancestral locus Anc_7.201
YALI1_F25852g	Compare to YALI0F19404g, similar to Saccharomyces cerevisiae MIP1 (YOR330C); ancestral locus Anc_7.64, similar to uniprot|Q01941 Pichia pastoris DNA polymerase gamma (EC 2.7.7.7) (Mitochondrial DNA polymerase catalytic subunit)
YALI1_F25885g	Compare to YALI0F19426g, some similarities with uniprot|Q12361 Saccharomyces cerevisiae YDL035c GPR1 G-protein coupled receptor singleton, similar to Saccharomyces cerevisiae GPR1 (YDL035C); ancestral locus Anc_3.156
YALI1_F25908g	Compare to YALI0F19448g, similar to uniprot|P33317 Saccharomyces cerevisiae YBR252w DUT1 dUTP pyrophosphatase precursor, similar to Saccharomyces cerevisiae DUT1 (YBR252W); ancestral locus Anc_7.173
YALI1_F25924g	Compare to YALI0F19470g, similar to uniprot|P16622 Saccharomyces cerevisiae YOR176w HEM15 ferrochelatase precursor, similar to Saccharomyces cerevisiae HEM15 (YOR176W); ancestral locus Anc_6.67
YALI1_F25941g	Compare to YALI0F19492g, no similarity
YALI1_F25951g	Compare to YALI0F19514g, similar to Saccharomyces cerevisiae ALE1 (YOR175C); ancestral locus Anc_6.66, similar to uniprot|Q08548 Saccharomyces cerevisiae ORF YOR175C
YALI1_F25984g	Compare to YALI0F19536g, weakly similar to CAD70735 (Neurospora crassa) Related to putative tartrate transporter and uniprot|P53322 Saccharomyces cerevisiae YGR260w TNA1
YALI1_F25999g	Compare to YALI0F19558g, weakly similar to uniprot|P40066 Saccharomyces cerevisiae YER107c GLE2 required for nuclear pore complex structure and function, similar to Saccharomyces cerevisiae BUB3 (YOR026W); ancestral locus Anc_5.615
YALI1_F26012g	Compare to YALI0F19580g, some similarities with uniprot|Q03370 Saccharomyces cerevisiae YDR479c pex19, similar to Saccharomyces cerevisiae PEX29 (YDR479C); ancestral locus Anc_5.614
YALI1_F26039g	Compare to YALI0F19602g, highly similar to uniprot|Q9C2L8 Neurospora crassa Probable GTPase Rab7 protein
YALI1_F26058g	Compare to YALI0F19624g, no similarity putative nucleic acid binding protein
YALI1_F26108g	Compare to YALI0F19646g, similar to Saccharomyces cerevisiae YCR045C; ancestral locus Anc_6.313, weakly similar to uniprot|P58371 Magnaporthe grisea Subtilisin-like proteinase Spm1 precursor (EC 3.4.21.-) and uniprot|P09230 Yarrowia lipolytica Alkaline extracellular protease precursor (EC 3.4.21.-) (AEP)
YALI1_F26127g	Compare to YALI0F19668g, similar to Saccharomyces cerevisiae CUE1 (YMR264W) and CUE4 (YML101C); ancestral locus Anc_8.816, weakly similar to uniprot|P38428 Saccharomyces cerevisiae YMR264w CUE1 involved in ubiquitination and degradation at the ER surface singleton
YALI1_F26142g	Compare to YALI0F19690g, similar to DEHA0F20284g Debaryomyces hansenii, similar to Saccharomyces cerevisiae SAP30 (YMR263W); ancestral locus Anc_8.815
YALI1_F26167g	Compare to YALI0F19712g, uniprot|Q9P8M1 Yarrowia lipolytica ADP/ATP carrier protein
YALI1_F26186g	Compare to YALI0F19734g, weakly similar to CA3550|IPF13228 Candida albicans IPF13228 unknown function and uniprot|Q872L9 Neurospora crassa CAD70562 Hypothetical protein B19A17.340
YALI1_F26216g	Compare to YALI0F19756g, similar to Saccharomyces cerevisiae ATP10 (YLR393W); ancestral locus Anc_4.253, weakly similar to uniprot|P18496 Saccharomyces cerevisiae YLR393w ATP10 F1F0 ATPase complex assembly protein
YALI1_F26234g	Compare to YALI0F19778g, some similarities with uniprot|P39743 Saccharomyces cerevisiae YDR388w RVS167 reduced viability upon starvation protein
YALI1_F26313g	Compare to YALI0F19800g, similar to uniprot|P36101 Saccharomyces cerevisiae YKL027w, similar to Saccharomyces cerevisiae YHR003C and YKL027W; ancestral locus Anc_2.527
YALI1_F26367g	Compare to YALI0F19822g, some similarities with uniprot|O13337 Magnaporthe grisea Putative transcriptional regulator
YALI1_F26399g	Compare to YALI0F19844g, some similarities with uniprot|P40514 Saccharomyces cerevisiae YIL067c hypothetical protein, similar to Saccharomyces cerevisiae YIL067C; ancestral locus Anc_7.257
YALI1_F26427g	Compare to YALI0F19866g, similar to uniprot|P19145 Saccharomyces cerevisiae General amino-acid permease GAP1 YKR039w
YALI1_F26519g	Compare to YALI0F19888g, weakly similar to DEHA-IPF1503.1 Debaryomyces hansenii DEHA0D08371g
YALI1_F26574g	Compare to YALI0F19910g, similar to uniprot|P47176 Saccharomyces cerevisiae YJR148w TWT2 branched chain amino acid aminotransferase cytosolic
YALI1_F26612g	Compare to YALI0F19976g, similar to uniprot|Q00776 Saccharomyces cerevisiae YPL259c APM1 AP-1 complex subunit mu1 subunit
YALI1_F26620g	Compare to YALI0F19998g, weakly similar to uniprot|P38744 Saccharomyces cerevisiae YHL018w related to human pterin-4-alpha- carbinolamine dehydratase
YALI1_F26654g	Compare to YALI0F20020g, some similarities with uniprot|Q873L5 Neurospora crassa B18E6.100 unknown function
YALI1_F26692g	Compare to YALI0F20042g, similar to uniprot|P26793 Saccharomyces cerevisiae YKL113c RAD27 ssDNA endonuclease and 5 -3 exonuclease
YALI1_F26726g	Compare to YALI0F20108g, similar to uniprot|Q12063 Saccharomyces cerevisiae YDL193W and wi|NCU09312.1 Neurospora crassa NCU09312.1 hypothetical protein, similar to Saccharomyces cerevisiae NUS1 (YDL193W); ancestral locus Anc_7.308
YALI1_F26737g	Compare to YALI0F20130g, no similarity
YALI1_F26757g	Compare to YALI0F20152g, some similarities with uniprot|P40467 Saccharomyces cerevisiae YIL130w
YALI1_F26793g	Compare to YALI0F20174g, similar to uniprot|Q9Y8G1 Emericella nidulans Multidrug resistance protein MDR (ABC-transporter)
YALI1_F26860g	Compare to YALI0F20196g, similar to Saccharomyces cerevisiae TRM2 (YKR056W); ancestral locus Anc_1.214, similar to uniprot|P33753 Saccharomyces cerevisiae YKR056w RNC1 tRNA(m5U54)methyltransferase
YALI1_F26873g	Compare to YALI0F20218g, similar to Saccharomyces cerevisiae VAS1 (YGR094W); ancestral locus Anc_3.433, similar to uniprot|P07806 Saccharomyces cerevisiae YGR094w VAS1 valyl-tRNA synthetase
YALI1_F26915g	Compare to YALI0F20240g, similar to Saccharomyces cerevisiae RRP46 (YGR095C); ancestral locus Anc_3.434, similar to uniprot|P53256 Saccharomyces cerevisiae YGR095c RRP46 involved in rRNA processing
YALI1_F26924g	Compare to YALI0F20262g, weakly similar to uniprot|P53257 Saccharomyces cerevisiae YGR096w, similar to Saccharomyces cerevisiae TPC1 (YGR096W); ancestral locus Anc_3.435
YALI1_F26957g	Compare to YALI0F20284g, similar to uniprot|O94372 Schizosaccharomyces pombe Conserved protein and wi|NCU00501.1 Neurospora crassa NCU00501.1 hypothetical protein, similar to Saccharomyces cerevisiae NOC4 (YPR144C); ancestral locus Anc_3.482
YALI1_F26967g	Compare to YALI0F20306g, similar to Saccharomyces cerevisiae ATP4 (YPL078C); ancestral locus Anc_8.549, similar to uniprot|O13349 Kluyveromyces lactis ATP synthase subunit 4 mitochondrial precursor (EC 3.6.3.14) and uniprot|P05626 Saccharomyces cerevisiae YPL078c ATP4 F1F0- ATPase complex F0 subunit B singleton
YALI1_F27002g	Compare to YALI0F20328g, similar to Saccharomyces cerevisiae PIS1 (YPR113W); ancestral locus Anc_3.436, similar to uniprot|P06197 Saccharomyces cerevisiae YPR113w PIS1 CDPdiacylglycerol--inositol 3- phosphatidyltransferase
YALI1_F27017g	Compare to YALI0F20350g, some similarities with DEHA0C09570g Debaryomyces hansenii, similar to Saccharomyces cerevisiae RIX1 (YHR197W); ancestral locus Anc_4.365
YALI1_F27041g	Compare to YALI0F20372g, similar to uniprot|Q12136 Saccharomyces cerevisiae YDL153c SAS10 involved in silencing, similar to Saccharomyces cerevisiae SAS10 (YDL153C); ancestral locus Anc_7.330
YALI1_F27099g	Compare to YALI0F20394g, similar to uniprot|Q05791 Saccharomyces cerevisiae YLR215c
YALI1_F27101g	Compare to YALI0F20416g, highly similar to uniprot|P39078 Saccharomyces cerevisiae YDL143w CCT4 component of chaperonin-containing T-complex
YALI1_F27132g	Compare to YALI0F20438g, weakly similar to uniprot|P36144 Saccharomyces cerevisiae YKR060w, similar to Saccharomyces cerevisiae UTP30 (YKR060W); ancestral locus Anc_1.210
YALI1_F27141g	Compare to YALI0F20460g, similar to Saccharomyces cerevisiae REB1 (YBR049C) and YDR026C; ancestral locus Anc_3.256, some similarities with uniprot|Q05950 Kluyveromyces lactis DNA-binding protein REB1 (QBP)
YALI1_F27175g	Compare to YALI0F20482g, highly similar to uniprot|P26781 Saccharomyces cerevisiae YDR025w RPS11A and RPS11B ribosomal protein S11. e or uniprot|P26781 Saccharomyces cerevisiae YBR048w RPS11B ribosomal protein S11.e.B, similar to Saccharomyces cerevisiae RPS11B (YBR048W) and RPS11A (YDR025W); ancestral locus Anc_3.255
YALI1_F27211g	Compare to YALI0F20504g, similar to uniprot|P00431 Saccharomyces cerevisiae YKR066c CCP1 cytochrome-c peroxidase precursor
YALI1_F27237g	Compare to YALI0F20526g, weakly similar to uniprot|Q02455 Saccharomyces cerevisiae YKR095w MLP1 myosin-like protein, similar to Saccharomyces cerevisiae MLP2 (YIL149C) and MLP1 (YKR095W); ancestral locus Anc_5.702
YALI1_F27304g	Compare to YALI0F20548g, no similarity
YALI1_F27343g	Compare to YALI0F20570g, similar to uniprot|P36051 Saccharomyces cerevisiae YKL165c MCD4 sporulation protein, similar to Saccharomyces cerevisiae MCD4 (YKL165C); ancestral locus Anc_1.184
YALI1_F27356g	Compare to YALI0F20592g, similar to uniprot|P14904 Saccharomyces cerevisiae YKL103c LAP4 aminopeptidase yscI precursor vacuolar
YALI1_F27395g	Compare to YALI0F20614g, no similarity
YALI1_F27465g	Compare to YALI0F20636g, some similarities with uniprot|P38111 Saccharomyces cerevisiae YBR136w ESR1 cell cycle checkpoint protein
YALI1_F27470g	Compare to YALI0F20658g, similar to uniprot|Q06706 Saccharomyces cerevisiae YLR384c IKI3 confers sensitivity to killer toxin, similar to Saccharomyces cerevisiae IKI3 (YLR384C); ancestral locus Anc_4.240
YALI1_F27529g	Compare to YALI0F20680g, no similarity, similar to Saccharomyces cerevisiae STE5 (YDR103W); ancestral locus Anc_8.247
YALI1_F27556g	Compare to YALI0F20702g, similar to Saccharomyces cerevisiae PDA1 (YER178W); ancestral locus Anc_8.246, highly similar to uniprot|P16387 Saccharomyces cerevisiae YER178w PDA1 pyruvate dehydrogenase (lipoamide) alpha chain precursor
YALI1_F27574g	Compare to YALI0F20724g, similar to Saccharomyces cerevisiae BRR2 (YER172C); ancestral locus Anc_8.238, similar to uniprot|P32639 Saccharomyces cerevisiae YER172c BRR2 RNA helicase-related protein
YALI1_F27663g	Compare to YALI0F20746g, similar to Saccharomyces cerevisiae RAD3 (YER171W); ancestral locus Anc_8.237, highly similar to uniprot|P06839 Saccharomyces cerevisiae YER171w RAD3 DNA helicase/ATPase
YALI1_F27667g	Compare to YALI0F20768g, highly similar to uniprot|P32495 Saccharomyces cerevisiae YDL208w NHP2 nucleolar rRNA processing protein
YALI1_F27686g	Compare to YALI0F20790g, similar to uniprot|P05373 Saccharomyces cerevisiae YGL040c HEM2 Delta-aminolevulinate dehydratase, a homo- octameric enzyme, catalyzes the conversion of delta- aminolevulinic acid to porphobilinogen, the second step in the heme biosynthetic pathway, similar to Saccharomyces cerevisiae HEM2 (YGL040C); ancestral locus Anc_4.70
YALI1_F27692g	Compare to YALI0F20812g, ancestral locus Anc_4.71, weakly similar to uniprot|Q8BWR2 Mus musculus TRP26
YALI1_F27716g	Compare to YALI0F20834g, weakly similar to uniprot|P87119 Schizosaccharomyces pombe Zinc finger C3HC4 type putative transcription factor
YALI1_F27731g	Compare to YALI0F20856g, similar to Saccharomyces cerevisiae COF1 (YLL050C); ancestral locus Anc_4.2, highly similar to uniprot|Q03048 Saccharomyces cerevisiae YLL050c COF1 cofilin actin binding and severing protein
YALI1_F27758g	Compare to YALI0F20878g, similar to Saccharomyces cerevisiae YKL162C; ancestral locus Anc_5.646, similar to uniprot|Q6BNU5 Debaryomyces hansenii DEHA0E19965g and ca|IPF14710 Candida albicans unknown function
YALI1_F27761g	Compare to YALI0F20900g, weakly similar to uniprot|Q9HDU6 Schizosaccharomyces pombe Probable 2-dehydropantoate 2- reductase (EC 1.1.1.169) (Ketopantoate reductase)
YALI1_F27791g	Compare to YALI0F20922g, weakly similar to uniprot|P38731 Saccharomyces cerevisiae YHL040c ARN1 ferrichrome-type siderophore transporter
YALI1_F27812g	Compare to YALI0F20944g, weakly similar to uniprot|Q03942 Saccharomyces cerevisiae YDR198c
YALI1_F27834g	Compare to YALI0F20966g, weakly similar to uniprot|O13844 Schizosaccharomyces pombe Putative tricarboxylate transport protein, similar to Saccharomyces cerevisiae CTP1 (YBR291C); ancestral locus Anc_2.525
YALI1_F27871g	Compare to YALI0F20988g, similar to uniprot|P25375 Saccharomyces cerevisiae YCL057W Saccharolysin (EC 3.4.24.37) (Protease D) (Proteinase yscD) (Oligopeptidase YSCD)
YALI1_F27904g	Compare to YALI0F21010g, similar to Saccharomyces cerevisiae ADE5,7 (YGL234W); ancestral locus Anc_3.557, uniprot|Q99148 Yarrowia lipolytica Bifunctional purine biosynthetic protein ADE1
YALI1_F27929g	Compare to YALI0F21032g, uniprot|Q9UUU4 Yarrowia lipolytica ATP-dependent RNA helicase, similar to Saccharomyces cerevisiae DHH1 (YDL160C); ancestral locus Anc_7.336
YALI1_F27945g	Converted to coding from non-coding YALI0F21054g, uniprot|Q9Y7W8 Yarrowia lipolytica ser/thr/tyr MAP kinase kinase, similar to Saccharomyces cerevisiae STE7 (YDL159W); ancestral locus Anc_7.335
YALI1_F27968g	Compare to YALI0F21087g, similar to Saccharomyces cerevisiae YDL157C; ancestral locus Anc_7.334, some similarities with uniprot|Q12082 Saccharomyces cerevisiae YDL157C
YALI1_F27989g	Compare to YALI0F21109g, weakly similar to uniprot|CAD70735 Neurospora crassa 64C2.200 Related to putative tartrate transporter and uniprot|P53322 Saccharomyces cerevisiae YGR260w TNA1
YALI1_F28015g	Compare to YALI0F21131g, similar to uniprot|P38324 Saccharomyces cerevisiae YBR228w, similar to Saccharomyces cerevisiae SLX1 (YBR228W); ancestral locus Anc_6.125
YALI1_F28025g	Compare to YALI0F21153g, highly similar to uniprot|P38912 Saccharomyces cerevisiae YMR260c TIF11 translation initiation factor eIF1a, similar to Saccharomyces cerevisiae TIF11 (YMR260C); ancestral locus Anc_8.812
YALI1_F28031g	Compare to YALI0F21175g, weakly similar to uniprot|Q9USJ8 Schizosaccharomyces pombe Hypothetical 24.6 kDa protein
YALI1_F28064g	Compare to YALI0F21197g, similar to uniprot|Q8TGF1 Aspergillus fumigatus Carnitine acetyl transferase
YALI1_F28092g	Compare to YALI0F21219g, similar to Saccharomyces cerevisiae GRX5 (YPL059W); ancestral locus Anc_8.519, similar to wi|NCU04098.1 Neurospora crassa NCU04098. 1 probable glutaredoxin
YALI1_F28107g	Compare to YALI0F21241g, similar to uniprot|Q10167 Schizosaccharomyces pombe Hypothetical protein C26A3.14c, similar to Saccharomyces cerevisiae YKL018C-A; ancestral locus Anc_2.658
YALI1_F28112g	Compare to YALI0F21263g, weakly similar to uniprot|AAH44174 Brachydanio rerio 9430077D24 gene and wi|NCU07885.1 Neurospora crassa NCU07885.1 hypothetical protein, similar to Saccharomyces cerevisiae SWD2 (YKL018W); ancestral locus Anc_2.657
YALI1_F28132g	Compare to YALI0F21285g, no similarity
YALI1_F28144g	Compare to YALI0F21307g, similar to uniprot|Q04272 Saccharomyces cerevisiae YMR077C VPS20 and DEHA0E22154g Debaryomyces hansenii IPF 11162.1, similar to Saccharomyces cerevisiae VPS20 (YMR077C)
YALI1_F28146g	Compare to YALI0F21329g, similar to uniprot|Q07844 Saccharomyces cerevisiae YLL034c
YALI1_F28202g	Compare to YALI0F21362g, similar to Saccharomyces cerevisiae YIL151C and YKR096W; ancestral locus Anc_5.706, no similarity
YALI1_F28212g	Compare to YALI0F21373g, similar to Saccharomyces cerevisiae PCC1 (YKR095W-A); ancestral locus Anc_5.705,gnl|GLV|YALI0F21373g [Yarrowia lipolytica] similar to NP_878113 S. cerevisiae YKR095W-A PCC1 conserved smallorf unknown function
YALI1_F28222g	Compare to YALI0F21384g, no similarity
YALI1_F28274g	Compare to YALI0F21406g, similar to Saccharomyces cerevisiae NCE103 (YNL036W); ancestral locus Anc_2.275, weakly similar to uniprot|O94255 Schizosaccharomyces pombe Carbonic anhydrase
YALI1_F28333g	Compare to YALI0F21428g, some similarities with uniprot|P10667 Xenopus laevis Integumentary mucin A.1 precursor (FIM-A.1) (Preprospasmolysin)
YALI1_F28393g	Compare to YALI0F21450g, no similarity
YALI1_F28453g	Compare to YALI0F21483g, similar to Saccharomyces cerevisiae RPF1 (YHR088W); ancestral locus Anc_5.385, highly similar to uniprot|Q9UVE8 Yarrowia lipolytica Hypothetical 39.4 kDa protein
YALI1_F28459g	Compare to YALI0F21494g, gnl|GLV|YALI0F21494g [Yarrowia lipolytica] uniprot|Q9UVE9 Yarrowia lipolytica YALI0F21494g hypothetical protein 49c
YALI1_F28467g	Compare to YALI0F21505g, similar to Saccharomyces cerevisiae SEC65 (YML105C); ancestral locus Anc_8.826, uniprot|P41922 Yarrowia lipolytica Signal recognition particle 19kD subunit
YALI1_F28485g	Compare to YALI0F21527g, similar to Saccharomyces cerevisiae URA5 (YML106W) and URA10 (YMR271C); ancestral locus Anc_8.827, uniprot|P41923 Yarrowia lipolytica Orotate phosphoribosyltransferase
YALI1_F28490g	Compare to YALI0F21549g, highly similar to uniprot|Q9UVF1 Yarrowia lipolytica Hypothetical 43.1 kDa protein
YALI1_F28537g	Compare to YALI0F21615g, similar to Saccharomyces cerevisiae CYM1 (YDR430C); ancestral locus Anc_5.541, similar to uniprot|Q9UVF2 Yarrowia lipolytica Hypothetical 86.9 kDa protein (Fragment) and uniprot|P32898 Saccharomyces cerevisiae YDR430c
YALI1_F28550g	Compare to YALI0F21637g, similar to Saccharomyces cerevisiae RLF2 (YPR018W); ancestral locus Anc_8.121, weakly similar to uniprot|Q12495 Saccharomyces cerevisiae YPR018w RLF2 chromatin assembly complex subunit p90
YALI1_F28590g	Compare to YALI0F21659g, similar to uniprot|Q12436 Saccharomyces cerevisiae ORF YLR130C
YALI1_F28633g	Truncated form of YALI0F21681g, some similarities with uniprot|P33332 Saccharomyces cerevisiae YER008c SEC3 (PSL1 protein) component of exocyst complex, similar to Saccharomyces cerevisiae SEC3 (YER008C); ancestral locus Anc_7.154
YALI1_F28686t	Compare to YALI0F21703g, Partial Line element, no similarity
YALI1_F28739t	Compare to YALI0F03245g:2, Partial Line element, uniprot|Q8NIP3 Yarrowia lipolytica Reverse transcriptase
YALI1_F28744g	Compare to YALI0F21725g, similar to Saccharomyces cerevisiae NUG1 (YER006W); ancestral locus Anc_7.150, similar to uniprot|P40010 Saccharomyces cerevisiae Hypothetical GTP-binding protein (YER006w)
YALI1_F28765g	Compare to YALI0F21747g, similar to Saccharomyces cerevisiae YDL156W; ancestral locus Anc_7.333, similar to uniprot|Q12510 Saccharomyces cerevisiae ORF YDL156W
YALI1_F28807g	Compare to YALI0F21769g, similar to uniprot|P36000 Saccharomyces cerevisiae YKL135c APL2 AP-1 complex subunit beta1-adaptin
YALI1_F28833g	Compare to YALI0F21791g, similar to uniprot|Q96WN8 Candida albicans GOG5 Golgi GDP-mannose transporter, similar to Saccharomyces cerevisiae HVG1 (YER039C) and VRG4 (YGL225W); ancestral locus Anc_3.538
YALI1_F28868g	Compare to YALI0F21813g, no similarity
YALI1_F28897g	Compare to YALI0F21835g, similar to uniprot|Q871T2 Neurospora crassa CAD70909 Related to centractin (ARP1), similar to Saccharomyces cerevisiae NRP1 (YDL167C); ancestral locus Anc_7.349
YALI1_F28915g	Compare to YALI0F21857g, similar to uniprot|P36091 Saccharomyces cerevisiae YKL046c
YALI1_F28943g	Compare to YALI0F21879g, similar to uniprot|Q02884 Saccharomyces cerevisiae LPG7P (YPL101w Saccharomyces cerevisiae YPL101w RNA polymerase II Elongator protein subunit), similar to Saccharomyces cerevisiae ELP4 (YPL101W); ancestral locus Anc_8.581
YALI1_F28967g	Compare to YALI0F21901g, similar to Saccharomyces cerevisiae SWD3 (YBR175W); ancestral locus Anc_8.585, some similarities with uniprot|Q7S199 Neurospora crassa NCU07521.1 hypothetical protein
YALI1_F28995g	Compare to YALI0F21923g, some similarities with uniprot|Q00170 Emericella nidulans Regulatory protein
YALI1_F29038g	Compare to YALI0F21945g, similar to uniprot|P30666 Schizosaccharomyces pombe DNA replication licensing factor mcm3 (Minichromosome maintenance protein 3) and uniprot|P24279 Saccharomyces cerevisiae YEL032w MCM3 replication initiation protein
YALI1_F29078g	Truncated form of YALI0F21967g, similar to uniprot|P39986 Saccharomyces cerevisiae YEL031w SPF1 P-type ATPase
YALI1_F29127g	Compare to YALI0F21989g, no similarity
YALI1_F29139g	Compare to YALI0F22011g, no similarity
YALI1_F29168g	Compare to YALI0F22033g, similar to Saccharomyces cerevisiae YLR241W; ancestral locus Anc_8.400, similar to uniprot|Q06538 Saccharomyces cerevisiae YLR241w
YALI1_F29192g	Compare to YALI0F22055g, similar to uniprot|P40487 Saccharomyces cerevisiae YIL103w, similar to Saccharomyces cerevisiae DPH1 (YIL103W); ancestral locus Anc_2.272
YALI1_F29196g	Compare to YALI0F22077g, similar to Saccharomyces cerevisiae SHQ1 (YIL104C); ancestral locus Anc_2.271, some similarities with uniprot|O43076 Schizosaccharomyces pombe Hypothetical 52.4 kDa protein
YALI1_F29253g	Compare to YALI0F22099g, similar to Saccharomyces cerevisiae BOP3 (YNL042W); ancestral locus Anc_2.270, no similarity
YALI1_F29301g	Compare to YALI0F22121g, similar to uniprot|Q7S1U1 Neurospora crassa NCU09058.1 hypothetical protein
YALI1_F29317g	Compare to YALI0F22136g, similar to Saccharomyces cerevisiae TOA2 (YKL058W); ancestral locus Anc_2.580, similar to uniprot|Q7SEH7 Neurospora crassa NCU09748.1 hypothetical protein
YALI1_F29356g	Compare to YALI0F22165g, weakly similar to DEHA0E14355g Debaryomyces hansenii IPF 11787.1 and CAGL0J08349g Candida glabrata IPF 6716.1
YALI1_F29395g	Compare to YALI0F22187g, some similarities with uniprot|Q7S1U2 Neurospora crassa NCU09057.1 hypothetical protein
YALI1_F29424g	Compare to YALI0F22209g, similar to Saccharomyces cerevisiae YER010C; ancestral locus Anc_7.158, some similarities with uniprot|P40011 Saccharomyces cerevisiae YER010c
YALI1_F29483g	Compare to YALI0F22231g, similar to uniprot|P25693 Saccharomyces cerevisiae YDL127W G1/S-specific cyclin PCL2
YALI1_F29540g	Compare to YALI0F22297g, some similarities with uniprot|CAD60777 Podospora anserina hypothetical protein Pa5D0090, similar to Saccharomyces cerevisiae YBL060W; ancestral locus Anc_7.384
YALI1_F29596g	Compare to YALI0F22319g, similar to uniprot|Q6CAX0 Yarrowia lipolytica YALI0C23705g
YALI1_F29604g	Compare to YALI0F22341g, similar to uniprot|P25451 Saccharomyces cerevisiae YER094c PUP3 20S proteasome subunit (beta3), similar to Saccharomyces cerevisiae PUP3 (YER094C); ancestral locus Anc_7.383
YALI1_F29635g	Compare to YALI0F22363g, weakly similar to uniprot|O74347 Schizosaccharomyces pombe Hypothetical UPF0287 protein C21D10.07 in chromosome II, similar to Saccharomyces cerevisiae YBL059C-A; ancestral locus Anc_7.382
YALI1_F29640g	Compare to YALI0F22367g, similar to Saccharomyces cerevisiae YBL059W and YER093C-A; ancestral locus Anc_7.381, similar to DEHA-IPF6949.1 Debaryomyces hansenii
YALI1_F29652g	Compare to YALI0F22421g, similar to Saccharomyces cerevisiae YNL108C and TFC7 (YOR110W); ancestral locus Anc_2.169, some similarities with uniprot|Q12415 Saccharomyces cerevisiae YOR110w TFC7 TFIIIC (transcription initiation factor) subunit 55 kDa Tau55
YALI1_F29670g	Compare to YALI0F22429g, similar to Saccharomyces cerevisiae YJR085C; ancestral locus Anc_7.454, some similarities with uniprot|P47131 Saccharomyces cerevisiae YJR085c similarity
YALI1_F29691g	Compare to YALI0F22451g, similar to Saccharomyces cerevisiae YDL173W; ancestral locus Anc_7.362, some similarities with KLLA-IPF2219.1 Kluyveromyces lactis
YALI1_F29704g	Compare to YALI0F22473g, some similarities with uniprot|Q02630 Saccharomyces cerevisiae YMR047c NUP116 nuclear pore protein
YALI1_F29727g	Compare to YALI0F22495g, similar to Saccharomyces cerevisiae TOP3 (YLR234W); ancestral locus Anc_8.414, similar to uniprot|O60126 Schizosaccharomyces pombe DNA topoisomerase III (EC 5.99.1.2)
YALI1_F29751g	Compare to YALI0F22517g, similar to Saccharomyces cerevisiae FCY1 (YPR062W); ancestral locus Anc_3.351, similar to uniprot|P78594 Candida albicans FCY1 Cytosine deaminase (Cytosine aminohydrolase)
YALI1_F29765g	Compare to YALI0F22539g, similar to Saccharomyces cerevisiae PEX3 (YDR329C); ancestral locus Anc_5.372, uniprot|Q874C0 Yarrowia lipolytica Pex3p
YALI1_F29798g	Compare to YALI0F22561g, no similarity
YALI1_F29828g	Compare to YALI0F22583g, no similarity
YALI1_F29836g	Compare to YALI0F22605g, similar to CA1311|IPF14233 Candida albicans IPF14233 and DEHA-IPF10476.1 Debaryomyces hansenii
YALI1_F29852g	Compare to YALI0F22627g, weakly similar to uniprot|Q8LF53 Arabidopsis thaliana Hypothetical protein
YALI1_F29867g	Compare to YALI0F22649g, some similarities with uniprot|Q9UTM0 Schizosaccharomyces pombe Hypothetical zinc-finger protein
YALI1_F29876g	Compare to YALI0F22671g, similar to uniprot|O94513 Schizosaccharomyces pombe Eukaryotic translation initiation factor 3 subunit 6 (eIF- 3 p48)
YALI1_F29905g	Compare to YALI0F22693g, no similarity
YALI1_F29911g	Compare to YALI0F22715g, weakly similar to uniprot|Q7S6J1 Neurospora crassa NCU04844.1 hypothetical protein
YALI1_F29937g	Compare to YALI0F22737g, similar to Saccharomyces cerevisiae GCD14 (YJL125C); ancestral locus Anc_1.229, similar to uniprot|P46959 Saccharomyces cerevisiae YJL125c GCD14 translational repressor of GCN4
YALI1_F29944g	Compare to YALI0F22759g, similar to Saccharomyces cerevisiae UTP8 (YGR128C); ancestral locus Anc_3.489, weakly similar to ca|CA5787|IPF1136 Candida albicans unknown function
YALI1_F29987g	Compare to YALI0F22781g, similar to uniprot|P20051 Saccharomyces cerevisiae Dihydroorotase (EC 3.5.2.3) (DHOase) YLR420w URA4, similar to Saccharomyces cerevisiae URA4 (YLR420W); ancestral locus Anc_4.294
YALI1_F30004g	Compare to YALI0F22803g, similar to uniprot|P53303 Saccharomyces cerevisiae YGR211w ZPR1, similar to Saccharomyces cerevisiae ZPR1 (YGR211W); ancestral locus Anc_5.120
YALI1_F30034g	Compare to YALI0F22825g, similar to uniprot|Q12358 Saccharomyces cerevisiae YLL057c
YALI1_F30061g	Compare to YALI0F22847g, no similarity
YALI1_F30106g	Compare to YALI0F22935g, similar to Saccharomyces cerevisiae RSM10 (YDR041W); ancestral locus Anc_3.278, weakly similar to uniprot|Q03201 Saccharomyces cerevisiae YDR041w RSM10 component of the mitochondrial ribosomal small subunit
YALI1_F30116g	Compare to YALI0F22957g, no similarity
YALI1_F30179g	Compare to YALI0F23023g, similar to ca|CA0686|IPF162 Candida albicans, similar to Saccharomyces cerevisiae YGR125W; ancestral locus Anc_3.485
YALI1_F30254g	Truncated form of YALI0F23045g, similar to Saccharomyces cerevisiae CDC39 (YCR093W); ancestral locus Anc_6.373, weakly similar to uniprot|P25655 Saccharomyces cerevisiae YCR093w CDC39 nuclear protein and DEHA0E02156g Debaryomyces hansenii IPF 5656.1
YALI1_F30289g	Compare to YALI0F23067g, weakly similar to uniprot|P08540 Kluyveromyces lactis Potential acid phosphatase (EC 3.1.3.2)
YALI1_F30317g	Compare to YALI0F23089g, similar to uniprot|P87041 Schizosaccharomyces pombe UDP- galactose transporter (Golgi UDP-Gal transporter)
YALI1_F30340g	Compare to YALI0F23111g, similar to Saccharomyces cerevisiae HAP2 (YGL237C); ancestral locus Anc_3.560, weakly similar to uniprot|P06774 Saccharomyces cerevisiae YGL237c HAP2 CCAAT-binding factor subunit
YALI1_F30367g	Compare to YALI0F23133g, no similarity
YALI1_F30395g	Compare to YALI0F23177g, similar to uniprot|P13856 Saccharomyces cerevisiae YGR152c RSR1 GTP-binding protein
YALI1_F30431g	Compare to YALI0F23199g, no similarity
YALI1_F30459g	Compare to YALI0F23221g, similar to Saccharomyces cerevisiae THR4 (YCR053W); ancestral locus Anc_6.323, similar to uniprot|P16120 Saccharomyces cerevisiae Threonine synthase (EC 4.2.3.1) (TS) YCR053w (o-p- homoserine p-lyase)
YALI1_F30479g	Compare to YALI0F23243g, similar to uniprot|P32375 Saccharomyces cerevisiae Allantoinase (EC 3.5.2.5) YIR027c DAL1
YALI1_F30496g	Compare to YALI0F23265g, weakly similar to uniprot|Q96UB2 Neurospora crassa NCU03800.1 hypothetical protein
YALI1_F30520g	Compare to YALI0F23287g, weakly similar to uniprot|P06243 Saccharomyces cerevisiae YDL017w CDC7 protein kinase P108.1.f3.4 Cell division control protein 7
YALI1_F30559g	Compare to YALI0F23309g, weakly similar to wi|NCU06498.1 Neurospora crassa NCU06498.1 hypothetical protein, similar to Saccharomyces cerevisiae CWC21 (YDR482C); ancestral locus Anc_8.503
YALI1_F30593g	Compare to YALI0F23353g, no similarity
YALI1_F30641g	Compare to YALI0F23375g, similar to Saccharomyces cerevisiae SRP101 (YDR292C); ancestral locus Anc_5.302, uniprot|Q9Y7B0 Yarrowia lipolytica Signal sequence receptor alpha subunit
YALI1_F30647g	Compare to YALI0F23397g, similar to uniprot|P40340 Saccharomyces cerevisiae YGR270w YTA7 26S proteasome subunit
YALI1_F30703g	Compare to YALI0F23441g, similar to uniprot|Q03557 Saccharomyces cerevisiae Probable glutamyl-tRNA(Gln) amidotransferase subunit A mitochondrial precursor (EC 6.3.5.-) (Glu-ADT subunit A) YMR293c
YALI1_F30754g	Compare to YALI0F23463g, similar to Saccharomyces cerevisiae ADO1 (YJR105W); ancestral locus Anc_7.499, similar to uniprot|P47143 Saccharomyces cerevisiae Putative adenosine kinase (EC 2.7.1.20) YJR105w ADO1
YALI1_F30789g	Compare to YALI0F23485g, some similarities with uniprot|Q7S4C9 Neurospora crassa NCU02191.1 hypothetical protein
YALI1_F30841g	Truncated form of YALI0F23507g, some similarities with uniprot|Q9P3E0 Neurospora crassa Conserved hypothetical protein
YALI1_F30852g	Truncated form of YALI0F23529g, similar to uniprot|P38555 Saccharomyces cerevisiae YER031c YPT31 GTP-binding protein of the rab family
YALI1_F30877g	Compare to YALI0F23551g, similar to uniprot|CAD60606 Podospora anserina similarity to thiosulfate sulfurtransferases, similar to Saccharomyces cerevisiae YOR251C; ancestral locus Anc_8.691
YALI1_F30903g	Compare to YALI0F23573g, some similarities with uniprot|O13853 Schizosaccharomyces pombe Hypothetical 83.7 kDa protein C19G12.14 and uniprot|P38994 Saccharomyces cerevisiae YDR208w MSS4 phosphatidylinositol-4-phosphate 5-kinase, similar to Saccharomyces cerevisiae MSS4 (YDR208W); ancestral locus Anc_8.418
YALI1_F31001g	Compare to YALI0F23595g, weakly similar to uniprot|P36775 Saccharomyces cerevisiae YBL022c PIM1 ATP-dependent protease mitochondrial
YALI1_F31053g	Compare to YALI0F23639g, no similarity, similar to Saccharomyces cerevisiae ATG17 (YLR423C); ancestral locus Anc_4.300
YALI1_F31070g	Compare to YALI0F23661g, similar to uniprot|P41816 Saccharomyces cerevisiae NADPH dehydrogenase 3 (EC 1.6.99.1) (Old yellow enzyme 3) YPL171c OYE3 isoform 3
YALI1_F31102g	Compare to YALI0F23683g, weakly similar to uniprot|P38996 Saccharomyces cerevisiae YPL190c NAB3 polyadenylated RNA-binding protein, similar to Saccharomyces cerevisiae NAB3 (YPL190C); ancestral locus Anc_6.193
YALI1_F31126g	Compare to YALI0F23705g, no similarity
YALI1_F31135g	Compare to YALI0F23727g, similar to Saccharomyces cerevisiae COX10 (YPL172C); ancestral locus Anc_8.710, similar to uniprot|P21592 Saccharomyces cerevisiae YPL172c COX10 farnesyl transferase
YALI1_F31153g	Compare to YALI0F23749g, highly similar to uniprot|Q7S579 Neurospora crassa NCU02291.1 hypothetical protein probable Glutaryl-CoA dehydrogenase
YALI1_F31215g	Compare to YALI0F23793g, similar to uniprot|Q04458 Saccharomyces cerevisiae YMR110c
YALI1_F31255g	Compare to YALI0F23815g, weakly similar to uniprot|Q7S2D5 Neurospora crassa NCU05943.1 hypothetical protein
YALI1_F31283g	Compare to YALI0F23837g, some similarities with uniprot|Q07560 Saccharomyces cerevisiae YDL142c PGS1 cardiolipin synthase and wi|NCU00135.1 Neurospora crassa NCU00135.1 hypothetical protein, similar to Saccharomyces cerevisiae CRD1 (YDL142C); ancestral locus Anc_7.316
YALI1_F31292g	Compare to YALI0F23859g, similar to Saccharomyces cerevisiae SCM3 (YDL139C); ancestral locus Anc_7.312, no similarity
YALI1_F31381g	Compare to YALI0F23903g, similar to Saccharomyces cerevisiae SNF3 (YDL194W) and RGT2 (YDL138W); ancestral locus Anc_7.309, similar to uniprot|P30606 Saccharomyces cerevisiae YOL103w ITR2 myo-inositol permease
YALI1_F31405g	Compare to YALI0F23947g, similar to Saccharomyces cerevisiae GAL7 (YBR018C); ancestral locus Anc_3.217, similar to uniprot|P09580 Kluyveromyces lactis Galactose- 1-phosphate uridylyltransferase (EC 2.7.7.10) and uniprot|P08431 Saccharomyces cerevisiae YBR018c GAL7 UDP- glucose--hexose-1-phosphate uridylyltransferase
YALI1_F31416g	Compare to YALI0F23969g, similar to wi|NCU02176.1 Neurospora crassa NCU02176. 1 conserved hypothetical protein
YALI1_F31432g	Compare to YALI0F23991g, similar to Saccharomyces cerevisiae YPI1 (YFR003C); ancestral locus Anc_8.95, similar to uniprot|P43587 Saccharomyces cerevisiae YFR003c and wi|NCU01670.1 Neurospora crassa NCU01670.1 hypothetical protein
YALI1_F31439g	Compare to YALI0F24013g, weakly similar to uniprot|P38985 Saccharomyces cerevisiae YDL092w SRP14 signal recognition particle subunit and DEHA0G17875g Debaryomyces hansenii IPF 5280.1, similar to Saccharomyces cerevisiae SRP14 (YDL092W); ancestral locus Anc_2.364
YALI1_F31463g	Compare to YALI0F24035g, similar to CA1798|IPF11448 Candida albicans IPF11448 unknown function, similar to Saccharomyces cerevisiae YMR155W; ancestral locus Anc_2.363
YALI1_F31482g	Compare to YALI0F24057g, no similarity
YALI1_F31493g	Truncated form of YALI0F24072g, no similarity
YALI1_F31512g	Compare to YALI0F24101g, similar to Saccharomyces cerevisiae YJL123C; ancestral locus Anc_1.232, weakly similar to uniprot|P47018 Saccharomyces cerevisiae YJL123c
YALI1_F31531g	Truncated form of YALI0F24123g, similar to Saccharomyces cerevisiae RPL20A (YMR242C) and RPL20B (YOR312C); ancestral locus Anc_8.789, highly similar to uniprot|P47913 Saccharomyces cerevisiae YOR312c RPL18B 60S large subunit ribosomal protein and highly similar to uniprot|P47913 Saccharomyces cerevisiae YMR242c RPL18A 60s large subunit ribosomal protein
YALI1_F31568g	Compare to YALI0F24145g, weakly similar to wi|NCU01815.1 Neurospora crassa NCU01815.1 predicted protein
YALI1_F31587g	Compare to YALI0F24167g, similar to Saccharomyces cerevisiae SPS4 (YOR313C); ancestral locus Anc_8.790, weakly similar to uniprot|P09937 Saccharomyces cerevisiae YOR313c SPS4 sporulation-specific protein
YALI1_F31639g	Compare to YALI0F24189g, no similarity
YALI1_F31672g	Compare to YALI0F24255g, no similarity
YALI1_F31687g	Compare to YALI0F24277g, weakly similar to uniprot|P49573 Saccharomyces cerevisiae YPR124w CTR1 copper transport protein
YALI1_F31689g	Compare to YALI0F24299g, some similarities with uniprot|Q12333 Saccharomyces cerevisiae YOL152w FRE7 and wi|NCU08194.1 Neurospora crassa NCU08194.1 related to ferric reductase
YALI1_F31725g	Compare to YALI0F24321g, similar to uniprot|P32502 Saccharomyces cerevisiae Translation initiation factor eIF-2B beta subunit (eIF-2B GDP-GTP exchange factor) (Guanine nucleotide exchange factor subunit GCD7) (GCD complex subunit GCD7) YLR291c
YALI1_F31733g	Compare to YALI0F24343g, no similarity
YALI1_F31744g	Compare to YALI0F24365g, weakly similar to uniprot|P25626 Saccharomyces cerevisiae YCR046c PETCR46 ribosomal protein mitochondrial, similar to Saccharomyces cerevisiae IMG1 (YCR046C); ancestral locus Anc_6.315
YALI1_F31760g	Compare to YALI0F24387g, highly similar to uniprot|P02992 Saccharomyces cerevisiae YOR187w TUF1 translation elongation factor TU mitochondrial
YALI1_F31798g	Compare to YALI0F24409g, weakly similar to uniprot|P53721 Saccharomyces cerevisiae YNR018w, similar to Saccharomyces cerevisiae YNR018W; ancestral locus Anc_6.314
YALI1_F31822g	Compare to YALI0F24431g, weakly similar to uniprot|P53721 Saccharomyces cerevisiae YNR018w
YALI1_F31832g	Compare to YALI0F24453g, similar to Saccharomyces cerevisiae YCR045C; ancestral locus Anc_6.313, weakly similar to uniprot|P25381 Saccharomyces cerevisiae YCR045c similarity to serin proteases
YALI1_F31854g	Compare to YALI0F24475g, highly similar to uniprot|Q00607 Candida tropicalis Vacuolar ATP synthase 16 kDa proteolipid subunit (EC 3.6.3. 14) and uniprot|P25515 Saccharomyces cerevisiae YEL027w CUP5 H+-ATPase V0 domain 17 KD subunit vacuolar and wi|NCU01332.1 Neurospora crassa NCU01332.1 VACUOLAR ATP SYNTHASE
YALI1_F31866g	Compare to YALI0F24497g, highly similar to uniprot|P39990 Saccharomyces cerevisiae YEL026w SNU13 component of the U4/U6.U5 snRNP
YALI1_F31875g	Compare to YALI0F24519g, no similarity
YALI1_F31902g	Compare to YALI0F24541g, ancestral locus Anc_6.347, weakly similar to DEHA0E11440g Debaryomyces hansenii IPF 12015.1
YALI1_F31934g	Compare to YALI0F24563g, similar to Saccharomyces cerevisiae NUP85 (YJR042W); ancestral locus Anc_1.468, uniprot|Q8WZL7 Yarrowia lipolytica Nup85 protein
YALI1_F31947g	Compare to YALI0F24585g, weakly similar to uniprot|Q9P664 Neurospora crassa Related to protein-tyrosine-phosphatase
YALI1_F32002g	Compare to YALI0F24651g, similar to Saccharomyces cerevisiae COX15 (YER141W); ancestral locus Anc_8.183, similar to uniprot|P40086 Saccharomyces cerevisiae YER141W Cytochrome c oxidase assembly protein COX15
YALI1_F32010g	Compare to YALI0F24673g, similar to uniprot|P00127 Saccharomyces cerevisiae YFR033c QCR6 ubiquinol--cytochrome-c reductase 17K protein
YALI1_F32043g	Compare to YALI0F24695g, similar to Saccharomyces cerevisiae RPL8A (YHL033C) and RPL8B (YLL045C); ancestral locus Anc_4.8, highly similar to uniprot|P29453 Saccharomyces cerevisiae YLL045c RPL4B 60s large subunit ribosomal protein L7a.e.B alternative splicing generates different translational starts
YALI1_F32067g	Compare to YALI0F24717g, similar to Saccharomyces cerevisiae YFR032C; ancestral locus Anc_7.188, no similarity
YALI1_F32090g	Compare to YALI0F24739g, similar to Saccharomyces cerevisiae RPL2A (YFR031C-A) and RPL2B (YIL018W); ancestral locus Anc_7.187, highly similar to uniprot|P05736 Saccharomyces cerevisiae YIL018w RPL5A 60S large subunit ribosomal protein L8.e
YALI1_F32120g	Compare to YALI0F24761g, similar to DEHA0B14938g Debaryomyces hansenii
YALI1_F32167g	Compare to YALI0F24783g, similar to uniprot|P38989 Saccharomyces cerevisiae YFR031c SMC2 chromosome segregation protein, similar to Saccharomyces cerevisiae SMC2 (YFR031C); ancestral locus Anc_7.186
YALI1_F32204g	Compare to YALI0F24871g, no similarity
YALI1_F32232g	Compare to YALI0F24893g, similar to uniprot|P00931 Saccharomyces cerevisiae YGL026c TRP5 tryptophan synthase, similar to Saccharomyces cerevisiae TRP5 (YGL026C); ancestral locus Anc_4.92
YALI1_F32251g	Compare to YALI0F24915g, weakly similar to uniprot|P36096 Saccharomyces cerevisiae YKL034w TUL1 ligase, similar to Saccharomyces cerevisiae TUL1 (YKL034W); ancestral locus Anc_2.545
YALI1_F32287g	Compare to YALI0F24937g, similar to uniprot|P53111 Saccharomyces cerevisiae YGL157w unknown function
YALI1_F32305g	Compare to YALI0F24959g, similar to uniprot|P05754 Saccharomyces cerevisiae YER102w RPS8B and similar to uniprot|P05754 Saccharomyces cerevisiae YBL072c RPS8A Ribosomal Protein of the Small subunit, similar to Saccharomyces cerevisiae RPS8A (YBL072C) and RPS8B (YER102W); ancestral locus Anc_7.395
YALI1_F32312g	Compare to YALI0F24981g, similar to Saccharomyces cerevisiae KTI11 (YBL071W-A); ancestral locus Anc_7.394, highly similar to uniprot|Q3E840 Saccharomyces cerevisiae YBL071W-A KTI11 unknown function
YALI1_F32330g	Compare to YALI0F25003g, weakly similar to uniprot|P35183 Saccharomyces cerevisiae YBL069w AST1 PMA1 protein targeting protein or uniprot|P39945 Saccharomyces cerevisiae YER101c AST2 involved in targeting of plasma membrane [H+]ATPase, similar to Saccharomyces cerevisiae AST1 (YBL069W) and AST2 (YER101C); ancestral locus Anc_7.393
YALI1_F32342g	Compare to YALI0F25025g, similar to uniprot|O59760 Schizosaccharomyces pombe haloacid dehalogenase-like hydrolase, similar to Saccharomyces cerevisiae YKL033W-A; ancestral locus Anc_2.544
YALI1_F32363g	Compare to YALI0F25047g, highly similar to uniprot|P38689 Saccharomyces cerevisiae YHL011c PRS3 ribose-phosphate pyrophosphokinase, similar to Saccharomyces cerevisiae PRS3 (YHL011C); ancestral locus Anc_2.543
YALI1_F32387g	Compare to YALI0F25069g, similar to uniprot|Q12093 Saccharomyces cerevisiae YDL033c tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase, similar to Saccharomyces cerevisiae SLM3 (YDL033C); ancestral locus Anc_3.158
YALI1_F32399g	Compare to YALI0F25091g, similar to uniprot|Q06010 Saccharomyces cerevisiae YLR389c STE23 protease involved in a-factor processing
YALI1_F32441g	Compare to YALI0F25113g, similar to Saccharomyces cerevisiae YKL070W, weakly similar to uniprot|Q98A31 Rhizobium loti transcriptional regulator
YALI1_F32476g	Compare to YALI0F25135g, uniprot|O74931 Yarrowia lipolytica Alternative NADH- dehydrogenase precursor
YALI1_F32498g	Compare to YALI0F25157g, no similarity
YALI1_F32512g	Compare to YALI0F25179g, weakly similar to uniprot|Q08923 Saccharomyces cerevisiae YPL181w CTI6 transcription factor binding
YALI1_F32534g	Compare to YALI0F25201g, similar to Saccharomyces cerevisiae YKL069W; ancestral locus Anc_2.614, similar to uniprot|P36088 Saccharomyces cerevisiae YKL069w unknown function
YALI1_F32546g	Compare to YALI0F25223g, weakly similar to uniprot|P22804 Saccharomyces cerevisiae YIL004c BET1 transport protein, similar to Saccharomyces cerevisiae BET1 (YIL004C); ancestral locus Anc_7.135
YALI1_F32554g	Compare to YALI0F25245g, weakly similar to uniprot|Q9HEE0 Neurospora crassa NCU03807.1 hypothetical protein
YALI1_F32565g	Compare to YALI0F25267g, similar to uniprot|Q07953 Saccharomyces cerevisiae YLR022c unknown function, similar to Saccharomyces cerevisiae SDO1 (YLR022C); ancestral locus Anc_5.198
YALI1_F32597g	Compare to YALI0F25289g, highly similar to uniprot|P22202 Saccharomyces cerevisiae YER103w SSA4 heat shock protein of HSP70 family
YALI1_F32638g	Compare to YALI0F25333g, similar to uniprot|P27614 Saccharomyces cerevisiae YJL172w CPS1 Gly-X carboxypeptidase YSCS precursor
YALI1_F32659g	Compare to YALI0F25399g, highly similar to uniprot|Q3E7Y3 Saccharomyces cerevisiae YLR367w RPS22B and highly similar to uniprot|P0C0W1 Saccharomyces cerevisiae YJL190c RPS22A Ribosomal Protein of the Small subunit
YALI1_F32675g	Compare to YALI0F25421g, similar to Saccharomyces cerevisiae CWC15 (YDR163W); ancestral locus Anc_8.345, similar to DEHA0E17259g Debaryomyces hansenii
YALI1_F32688g	Compare to YALI0F25443g, similar to Saccharomyces cerevisiae NBP2 (YDR162C); ancestral locus Anc_8.344, weakly similar to uniprot|Q12163 Saccharomyces cerevisiae YDR162c NBP2 NAP1P-binding protein
YALI1_F32716g	Compare to YALI0F25465g, no similarity
YALI1_F32744g	Compare to YALI0F25487g, weakly similar to uniprot|O07408 Mycobacterium tuberculosis hypothetical protein and uniprot|Q9HU04 Pseudomonas aeruginosa hypothetical protein and uniprot|Q9DCP4 Mus musculus hypothetical protein
YALI1_F32764g	Compare to YALI0F25509g, no similarity
YALI1_F32792g	Compare to YALI0F25531g, similar to Saccharomyces cerevisiae RPL25 (YOL127W); ancestral locus Anc_3.43, highly similar to uniprot|P08792 Pichia jadinii 60S ribosomal protein L25
YALI1_F32841g	Compare to YALI0F25553g, similar to uniprot|Q9P702 Neurospora crassa probable sugar transporter
YALI1_F32880g	Compare to YALI0F25575g, similar to Saccharomyces cerevisiae GTT1 (YIR038C), similar to uniprot|Q8NJZ8 Emericella nidulans theta class glutathione S-transferase
YALI1_F32910g	Compare to YALI0F25597g, similar to uniprot|Q8X1Y6 Debaryomyces occidentalis SCR1 protein and uniprot|Q9URI1 Candida albicans Multidrug resistance protein
YALI1_F32948g	Compare to YALI0F25619g, weakly similar to uniprot|P36032 Saccharomyces cerevisiae YKL221w MCH2 transporter or uniprot|P53918 Saccharomyces cerevisiae YNL125c ESBP6 transporter
YALI1_F32969g	Compare to YALI0F25641g, weakly similar to uniprot|Q8DZ17 Streptococcus agalactiae putative homocysteine S-methyltransferase MmuM
YALI1_F32989g	Compare to YALI0F25663g, weakly similar to uniprot|P40505 Saccharomyces cerevisiae YIL084c SDS3 transcriptional regulator
YALI1_F33008g	Compare to YALI0F25685g, weakly similar to uniprot|P38355 Saccharomyces cerevisiae YBR287w unknown function
YALI1_F33061g	Compare to YALI0F25707g, no similarity
YALI1_F33103g	Compare to YALI0F25729g, weakly similar to uniprot|Q04740 Saccharomyces cerevisiae YMR234w RNH1 ribonuclease H
YALI1_F33123g	Compare to YALI0F25751g, weakly similar to uniprot|Q9UST8 Schizosaccharomyces pombe ribonuclease H
YALI1_F33143g	Compare to YALI0F25773g, similar to KLLA0B14839g Kluyveromyces lactis
YALI1_F33189g	Compare to YALI0F25795g, similar to uniprot|P50276 Saccharomyces cerevisiae YGR055w MUP1 high affinity methionine permease
YALI1_F33246g	Compare to YALI0F25817g, weakly similar to uniprot|P53966 Saccharomyces cerevisiae YNL029c KTR5 putative mannosyltransferase
YALI1_F33273g	Compare to YALI0F25839g, similar to uniprot|Q02933 Saccharomyces cerevisiae YPL123c RNY1 ribonuclease T2
YALI1_F33301g	Compare to YALI0F25861g, weakly similar to uniprot|Q03465 Saccharomyces cerevisiae YDL020c SON1 26S proteasome subunit, similar to Saccharomyces cerevisiae RPN4 (YDL020C); ancestral locus Anc_3.173
YALI1_F33331g	Compare to YALI0F25883g, highly similar to uniprot|P02309 Saccharomyces cerevisiae YNL030w HHF2 histone H4
YALI1_F33345g	Compare to YALI0F25905g, highly similar to uniprot|P61830 Saccharomyces cerevisiae YBR010w HHT1 histone H3
YALI1_F33381g	Compare to YALI0F25993g, similar to CA2860|IPF7054 Candida albicans
YALI1_F33403g	Compare to YALI0F26015g, weakly similar to uniprot|P40098 Saccharomyces cerevisiae YER182w unknown function
YALI1_F33426g	Compare to YALI0F26037g, similar to Saccharomyces cerevisiae PCD1 (YLR151C); ancestral locus Anc_8.365, weakly similar to uniprot|Q12524 Saccharomyces cerevisiae YLR151c PCD1 peroxisomal nudix hydrolase
YALI1_F33445g	Compare to YALI0F26059g, weakly similar to uniprot|Q12524 Saccharomyces cerevisiae YLR151c PCD1 peroxisomal nudix hydrolase
YALI1_F33524g	Compare to YALI0F26081g, no similarity
YALI1_F33572g	Compare to YALI0F26103g, weakly similar to uniprot|P32656 Saccharomyces cerevisiae YER163c unknown function
YALI1_F33579g	Compare to YALI0F26125g, similar to Saccharomyces cerevisiae YSA1 (YBR111C); ancestral locus Anc_3.365, similar to uniprot|Q01976 Saccharomyces cerevisiae YBR111c YSA1 sugar-nucleotide hydrolase
YALI1_F33587g	Compare to YALI0F26136g, similar to Saccharomyces cerevisiae SUS1 (YBR111W-A); ancestral locus Anc_3.366,gnl|GLV|YALI0F26136g [Yarrowia lipolytica] similar to AAQ19492 S. cerevisiae YBR111W-A SUS1 conserved smallorf Protein involved in mRNA export coupled transcription activation
YALI1_F33594g	Compare to YALI0F26147g, similar to uniprot|Q96GG9 Homo sapiens RP42 homolog or uniprot|Q9HCT3 Homo sapiens RP42 protein, similar to Saccharomyces cerevisiae DCN1 (YLR128W); ancestral locus Anc_8.322
YALI1_F33603g	Compare to YALI0F26156g, similar to Saccharomyces cerevisiae SPC1 (YJR010C-A); ancestral locus Anc_5.151,gnl|GLV|YALI0F26156g [Yarrowia lipolytica] weakly similar to uniprot|P46965 Saccharomyces cerevisiae YJR010Ca Microsomal signal peptidase subunit
YALI1_F33618g	Compare to YALI0F26169g, similar to uniprot|P36775 Saccharomyces cerevisiae YBL022c PIM1 ATP-dependent protease
YALI1_F33681g	Compare to YALI0F26191g, similar to uniprot|P38067 Saccharomyces cerevisiae YBR006w UGA2 succinate semialdehyde dehydrogenase
YALI1_F33704g	Compare to YALI0F26213g, similar to uniprot|Q9P457 Candida albicans Cu- binding metallothionein
YALI1_F33714g	Compare to YALI0F26279g, similar to uniprot|Q873I9 Neurospora crassa B9B11. 100
YALI1_F33732g	Compare to YALI0F26301g, some similarities with uniprot|P38356 Saccharomyces cerevisiae YBR290w BSD2 metal homeostasis protein, similar to Saccharomyces cerevisiae BSD2 (YBR290W); ancestral locus Anc_2.524
YALI1_F33754g	Compare to YALI0F26323g, similar to Saccharomyces cerevisiae CTP1 (YBR291C); ancestral locus Anc_2.525, highly similar to uniprot|P38152 Saccharomyces cerevisiae YBR291c CTP1 citrate transport protein
YALI1_F33764g	Compare to YALI0F26345g, weakly similar to uniprot|P80428 Saccharomyces cerevisiae YJL081c ACT3 actin-related protein, similar to Saccharomyces cerevisiae ARP7 (YPR034W); ancestral locus Anc_7.448
YALI1_F33790g	Compare to YALI0F26367g, similar to uniprot|P36100 Saccharomyces cerevisiae YKL028w TFA1 large subunit of transcription factor TFIIE, similar to Saccharomyces cerevisiae TFA1 (YKL028W); ancestral locus Anc_2.528
YALI1_F33791g	Compare to YALI0F26389g, similar to uniprot|AAH25801 Mus musculus Wdr5 protein and uniprot|Q9UGP9 Homo sapiens WD-repeat protein 5, similar to Saccharomyces cerevisiae SWD3 (YBR175W); ancestral locus Anc_8.585
YALI1_F33812g	Compare to YALI0F26411g, highly similar to uniprot|P43588 Saccharomyces cerevisiae YFR004w MPR1 26S proteasome regulatory subunit
YALI1_F33819g	Compare to YALI0F26433g, similar to Saccharomyces cerevisiae MSD1 (YPL104W); ancestral locus Anc_8.584, similar to uniprot|P15179 Saccharomyces cerevisiae YPL104w MSD1 aspartyl-tRNA synthetase
YALI1_F33861g	Compare to YALI0F26455g, similar to Saccharomyces cerevisiae BNA2 (YJR078W); ancestral locus Anc_7.444, weakly similar to uniprot|P47125 Saccharomyces cerevisiae YJR078w similarity to mammalian indoleamine 2 3- dioxygenase
YALI1_F33881g	Compare to YALI0F26477g, no similarity
YALI1_F33925g	Compare to YALI0F26499g, similar to uniprot|Q03834 Saccharomyces cerevisiae YDR097c MSH6 DNA mismatch repair protein
YALI1_F33951g	Compare to YALI0F26521g, similar to uniprot|P26364 Saccharomyces cerevisiae YER170w ADK2 adenylate kinase
YALI1_F33973g	Compare to YALI0F26543g, weakly similar to uniprot|O60930 Homo sapiens ribonuclease H1
YALI1_F34000g	Compare to YALI0F26565g, some similarities with DEHA-IPF6705 Debaryomyces hansenii
YALI1_F34029g	Compare to YALI0F26587g, similar to CA0994|IPF10077 Candida albicans
YALI1_F34051g	Compare to YALI0F26609g, similar to Saccharomyces cerevisiae HEM3 (YDL205C); ancestral locus Anc_8.456, similar to uniprot|P28789 Saccharomyces cerevisiae YDL205c HEM3 porphobilinogen deaminase
YALI1_F34057g	Compare to YALI0F26631g, weakly similar to uniprot|P39682 Saccharomyces cerevisiae YML046w PRP39 pre-mRNA splicing factor, similar to Saccharomyces cerevisiae PRP42 (YDR235W); ancestral locus Anc_8.457
YALI1_F34083g	Compare to YALI0F26653g, similar to CAGL0E02673g Candida glabrata and DEHA0C18040g Debaryomyces hansenii, similar to Saccharomyces cerevisiae UTP23 (YOR004W); ancestral locus Anc_6.15
YALI1_F34095g	Compare to YALI0F26675g, some similarities with uniprot|P00424 Saccharomyces cerevisiae YNL052w COX5A cytochrome-c oxidase chain V.A precursor
YALI1_F34105g	Compare to YALI0F26697g, highly similar to uniprot|P06104 Saccharomyces cerevisiae YGL058w RAD6 E2 ubiquitin- conjugating enzyme
YALI1_F34127g	Compare to YALI0F26719g, similar to uniprot|Q07589 Saccharomyces cerevisiae YDL144c unknown function
YALI1_F34141g	Compare to YALI0F26763g, no similarity
YALI1_F34187g	Compare to YALI0F26785g, similar to Saccharomyces cerevisiae PHM8 (YER037W) and SDT1 (YGL224C); ancestral locus Anc_3.536, weakly similar to uniprot|P53078 Saccharomyces cerevisiae YGL224c SDT1 nucleotidase
YALI1_F34202g	Compare to YALI0F26807g, weakly similar to uniprot|Q9C272 Neurospora crassa related to branched-chain alpha-ketoacid dehydrogenase kinase
YALI1_F34236g	Compare to YALI0F26873g, similar to Saccharomyces cerevisiae CDC11 (YJR076C); ancestral locus Anc_1.531, similar to uniprot|Q9C271 Neurospora crassa probable cell division control protein CDC12
YALI1_F34264g	Compare to YALI0F26895g, no similarity
YALI1_F34281g	Compare to YALI0F26917g, similar to DEHA0F11385g Debaryomyces hansenii
YALI1_F34304g	Compare to YALI0F26961g, no similarity possibly noncoding
YALI1_F34324g	Compare to YALI0F26983g, similar to CA0775|CaIFK2 Candida albicans CaIFK2 probable monoxygenase
YALI1_F34351g	Compare to YALI0F27005g, similar to CA0775|CaIFK2 Candida albicans CaIFK2 probable monoxygenase
YALI1_F34387g	Compare to YALI0F27027g, similar to uniprot|P28743 Saccharomyces cerevisiae YPL155c KIP2 kinesin-related protein
YALI1_F34397g	Compare to YALI0F27049g, similar to Saccharomyces cerevisiae TPM2 (YIL138C) and TPM1 (YNL079C); ancestral locus Anc_2.215, similar to uniprot|P40414 Saccharomyces cerevisiae YIL138c TPM2 tropomyosin
YALI1_F34429g	Compare to YALI0F27071g, similar to uniprot|O14413 Pichia angusta proteinase A and uniprot|P07267 Saccharomyces cerevisiae YPL154c PEP4 aspartyl protease
YALI1_F34472g	Compare to YALI0F27093g, some similarities with uniprot|P22216 Saccharomyces cerevisiae YPL153c SPK1 ser/thr/tyr protein kinase
YALI1_F34497g	Compare to YALI0F27159g, some similarities with uniprot|P47042 Saccharomyces cerevisiae YJL057c IKS1 probable serine/threonine-protein kinase
YALI1_F34521g	Compare to YALI0F27181g, similar to uniprot|P36017 Saccharomyces cerevisiae YOR089c VPS21 GTP-binding protein
YALI1_F34556g	Compare to YALI0F27203g, no similarity
YALI1_F34610g	Compare to YALI0F27225g, weakly similar to uniprot|Q9UA08 Caenorhabditis elegans Putative NADH oxidoreductase complex I subunit
YALI1_F34625g	Compare to YALI0F27247g, similar to Saccharomyces cerevisiae COQ4 (YDR204W); ancestral locus Anc_8.411, similar to uniprot|O13525 Saccharomyces cerevisiae YDR204w COQ4 ubiquinone biosynthesis protein
YALI1_F34631g	Compare to YALI0F27269g, no similarity
YALI1_F34661g	Compare to YALI0F27291g, weakly similar to uniprot|Q03944 Saccharomyces cerevisiae YDR200c VPS64 unknown function or uniprot|Q06001 Saccharomyces cerevisiae YLR238w FAR10 unknown function, similar to Saccharomyces cerevisiae VPS64 (YDR200C) and FAR10 (YLR238W); ancestral locus Anc_8.408
YALI1_F34675g	Compare to YALI0F27313g, weakly similar to uniprot|O13850 Schizosaccharomyces pombe hypothetical protein, similar to Saccharomyces cerevisiae COQ9 (YLR201C); ancestral locus Anc_7.351
YALI1_F34712g	Compare to YALI0F27335g, weakly similar to uniprot|Q03954 Saccharomyces cerevisiae YDR201w SPC19 spindle pole body protein
YALI1_F34729g	Compare to YALI0F27357g, similar to Saccharomyces cerevisiae LIP2 (YLR239C); ancestral locus Anc_8.407, weakly similar to uniprot|Q06005 Saccharomyces cerevisiae YLR239c lipoic acid ligase
YALI1_F34749g	Compare to YALI0F27379g, similar to Saccharomyces cerevisiae SEC2 (YNL272C); ancestral locus Anc_1.81, weakly similar to uniprot|O13930 Schizosaccharomyces pombe hypothetical serine-rich protein
YALI1_F34779g	Compare to YALI0F27401g, no similarity
YALI1_F34798g	Compare to YALI0F27423g, similar to uniprot|P28627 Saccharomyces cerevisiae YMR150c IMP1 protease mitochondrial singleton, similar to Saccharomyces cerevisiae IMP1 (YMR150C); ancestral locus Anc_2.374
YALI1_F34818g	Compare to YALI0F27445g, some similarities with KLLA0D14399g Kluyveromyces lactis
YALI1_F34862g	Compare to YALI0F27467g, similar to Saccharomyces cerevisiae LUC7 (YDL087C); ancestral locus Anc_2.370, similar to uniprot|Q07508 Saccharomyces cerevisiae YDL087c EXM2 yeast U1 snRNP protein with a role in 5 splice site recognition
YALI1_F34870g	Compare to YALI0F27489g, weakly similar to uniprot|Q9UUM3 Schizosaccharomyces pombe hypothetical protein and uniprot|Q12049 Saccharomyces cerevisiae YPR045c unknown function, similar to Saccharomyces cerevisiae YPR045C; ancestral locus Anc_7.471
YALI1_F34895g	Compare to YALI0F27511g, similar to Saccharomyces cerevisiae YKR017C; ancestral locus Anc_1.286, similar to uniprot|Q9P3U4 Schizosaccharomyces pombe molecular function unknown
YALI1_F34928g	Compare to YALI0F27533g, similar to Saccharomyces cerevisiae ARP4 (YJL081C); ancestral locus Anc_1.287, weakly similar to uniprot|P02579 Saccharomyces cerevisiae YFL039c ACT1 actin
YALI1_F34933g	Compare to YALI0F27555g, similar to Saccharomyces cerevisiae YKR016W; ancestral locus Anc_1.288, similar to DEHA0B01694g Debaryomyces hansenii
YALI1_F34963g	Compare to YALI0F27577g, no similarity
YALI1_F35003g	Compare to YALI0F27599g, similar to Saccharomyces cerevisiae MUK1 (YPL070W); ancestral locus Anc_8.537, weakly similar to uniprot|Q7RYY2 Neurospora crassa hypothetical protein
YALI1_F35029g	Compare to YALI0F27621g, no similarity
YALI1_F35061g	Compare to YALI0F27643g, uniprot|Q8J0E4 Yarrowia lipolytica BEM1 bud emergence mediator, similar to Saccharomyces cerevisiae BEM1 (YBR200W); ancestral locus Anc_8.539
YALI1_F35109g	Compare to YALI0F27665g, similar to uniprot|O94505 Schizosaccharomyces pombe 3 (2) 5 -bisphosphate nucleotidase, similar to Saccharomyces cerevisiae MET22 (YOL064C); ancestral locus Anc_3.157
YALI1_F35163g	Compare to YALI0F27687g, no similarity
YALI1_F35219g	Compare to YALI0F27709g, weakly similar to uniprot|P38731 Saccharomyces cerevisiae YHL040c ARN1 ferrichrome-type siderophore transporter
YALI1_F35274g	Compare to YALI0F27731g, no similarity
YALI1_F35329g	Compare to YALI0F27753g, some similarities with uniprot|Q10451 Schizosaccharomyces pombe hypothetical protein
YALI1_F35406g	Compare to YALI0F27775g, weakly similar to uniprot|P46674 Saccharomyces cerevisiae YDR159w SAC3 leucine permease transcriptional regulator, similar to Saccharomyces cerevisiae SAC3 (YDR159W); ancestral locus Anc_8.340
YALI1_F35417g	Compare to YALI0F27797g, no similarity, similar to Saccharomyces cerevisiae CUE2 (YKL090W); ancestral locus Anc_2.494
YALI1_F35441g	Compare to YALI0F27819g, similar to Saccharomyces cerevisiae MIF2 (YKL089W); ancestral locus Anc_2.495, some similarities with uniprot|Q9USY5 Schizosaccharomyces pombe Putative centromere associated protein
YALI1_F35476g	Compare to YALI0F27841g, similar to uniprot|Q9P504 Neurospora crassa probable Alp11 homologue of tubulin-folding cofactor B
YALI1_F35489g	Compare to YALI0F27863g, similar to Saccharomyces cerevisiae ULA1 (YPL003W); ancestral locus Anc_8.86, similar to uniprot|P42744 Arabidopsis thaliana AXR1 auxin-resistance protein
YALI1_F35542g	Compare to YALI0F27885g, weakly similar to uniprot|P40433 Saccharomyces cerevisiae YIL107c PFK26 6-phosphofructose-2-kinase
YALI1_F35578g	Compare to YALI0F27907g, similar to Saccharomyces cerevisiae ATG21 (YPL100W); ancestral locus Anc_8.580, similar to uniprot|P43601 Saccharomyces cerevisiae YFR021w unknown function
YALI1_F35591g	Compare to YALI0F27929g, similar to Saccharomyces cerevisiae MGR2 (YPL098C); ancestral locus Anc_8.578, weakly similar to uniprot|Q02889 Saccharomyces cerevisiae YPL098c unknown function
YALI1_F35603g	Compare to YALI0F27951g, similar to uniprot|Q04773 Saccharomyces cerevisiae YMR074c unknown function, similar to Saccharomyces cerevisiae YMR074C; ancestral locus Anc_2.537
YALI1_F35610g	Compare to YALI0F27973g, similar to uniprot|O87765 Lactococcus lactis pyrrolidone- carboxylate peptidase
YALI1_F35656g	Compare to YALI0F27995g, similar to Saccharomyces cerevisiae MRM1 (YOR201C); ancestral locus Anc_8.611, some similarities with uniprot|P25270 Saccharomyces cerevisiae YOR201c PET56 rRNA (guanosine-2 -O-)- methyltransferase
YALI1_F35690g	Compare to YALI0F28017g, weakly similar to uniprot|Q8TFD3 Mycosphaerella pini putative dothistromin transporter
YALI1_F35714g	Compare to YALI0F28039g, similar to Saccharomyces cerevisiae PAP1 (YKR002W); ancestral locus Anc_2.512, similar to uniprot|O93834 Candida albicans PAP1 poly(A) polymerase isozyme
YALI1_F35746g	Compare to YALI0F28061g, similar to uniprot|Q07015 Saccharomyces cerevisiae YDR257c RMS1 transcriptional regulator, similar to Saccharomyces cerevisiae SET7 (YDR257C); ancestral locus Anc_5.616
YALI1_F35753g	Compare to YALI0F28083g, similar to uniprot|P53742 Saccharomyces cerevisiae YNR053c NOG2 GTPase
YALI1_F35776g	Compare to YALI0F28105g, no similarity
YALI1_F35791g	Compare to YALI0F28127g, similar to CA3083|IPF11262 Candida albicans
YALI1_F35822g	Compare to YALI0F28149g, similar to uniprot|O74397 Schizosaccharomyces pombe putative asparagine synthase, similar to Saccharomyces cerevisiae YML096W; ancestral locus Anc_8.875
YALI1_F35836g	Compare to YALI0F28171g, no similarity possibly noncoding
YALI1_F35868g	Compare to YALI0F28193g, similar to uniprot|P53322 Saccharomyces cerevisiae YGR260w TNA1 similarity to allantoate transport protein
YALI1_F35907g	Compare to YALI0F28215g, similar to Saccharomyces cerevisiae DPB2 (YPR175W); ancestral locus Anc_7.532, similar to uniprot|P24482 Saccharomyces cerevisiae YPR175w DPB2 epsilon DNA polymerase
YALI1_F35938g	Compare to YALI0F28281g, similar to uniprot|Q02630 Saccharomyces cerevisiae YMR047c NUP116 nuclear pore protein
YALI1_F35983g	Compare to YALI0F28303g, weakly similar to uniprot|Q12500 Saccharomyces cerevisiae YLR114c unknown function, similar to Saccharomyces cerevisiae AVL9 (YLR114C); ancestral locus Anc_8.305
YALI1_F36033g	Truncated form of YALI0F28325g, no similarity
YALI1_F36059g	Compare to YALI0F28347g, no similarity possibly noncoding
YALI1_F36094g	Compare to YALI0F28369g, similar to DEHA0E10494g Debaryomyces hansenii
YALI1_F36127g	Compare to YALI0F28391g, similar to uniprot|P23394 Saccharomyces cerevisiae YDR243c PRP28 pre-mRNA splicing factor RNA helicase
YALI1_F36132g	Compare to YALI0F28413g, similar to uniprot|P40016 Saccharomyces cerevisiae YER021w SUN2 26S proteasome regulatory subunit, similar to Saccharomyces cerevisiae RPN3 (YER021W); ancestral locus Anc_7.502
YALI1_F36152g	Compare to YALI0F28435g, weakly similar to uniprot|P32569 Saccharomyces cerevisiae YER022w SRB4 RNA polymerase II transcription mediator, similar to Saccharomyces cerevisiae SRB4 (YER022W); ancestral locus Anc_7.503
YALI1_F36178g	Compare to YALI0F28457g, uniprot|Q99144 Yarrowia lipolytica Peroxisomal targeting signal receptor
YALI1_F36204g	Compare to YALI0F28479g, no similarity possibly noncoding
YALI1_F36233g	Compare to YALI0F28501g, similar to Saccharomyces cerevisiae SRP1 (YNL189W); ancestral locus Anc_2.63, similar to uniprot|Q02821 Saccharomyces cerevisiae YNL189w SRP1 karyopherin-alpha or importin
YALI1_F36259g	Compare to YALI0F28523g, similar to Saccharomyces cerevisiae WSS1 (YHR134W); ancestral locus Anc_2.107, weakly similar to uniprot|P38838 Saccharomyces cerevisiae YHR134w WSS1 unknown function
YALI1_F36267g	Compare to YALI0F28545g, weakly similar to DEHA0A11044g Debaryomyces hansenii
YALI1_F36290g	Compare to YALI0F28567g, weakly similar to uniprot|Q9P3G4 Neurospora crassa conserved hypothetical protein
YALI1_F36321g	Compare to YALI0F28589g, weakly similar to uniprot|Q8XU27 Ralstonia solanacearum hypothetical protein RSc3367 and uniprot|Q89QU4 Bradyrhizobium japonicum Blr3030 protein
YALI1_F36332g	Compare to YALI0F28611g, no similarity
YALI1_F36344g	Compare to YALI0F28633g, some similarities with uniprot|Q6C8I4 Yarrowia lipolytica YALI0D19360g
YALI1_F36415g	Compare to YALI0F28655g, similar to uniprot|O13281 Emericella nidulans Chitin synthase D
YALI1_F36492g	Compare to YALI0F28677g, some similarities with uniprot|Q870V1 Neurospora crassa B14A21.210
YALI1_F36552g	Compare to YALI0F28699g, similar to Saccharomyces cerevisiae YGR149W; ancestral locus Anc_4.86, similar to uniprot|Q9HEM1 Neurospora crassa conserved hypothetical protein
YALI1_F36584g	Compare to YALI0F28765g, highly similar to uniprot|O13437 Candida boidinii NAD- dependent formate dehydrogenase
YALI1_F36610g	Compare to YALI0F28831g, similar to DEHA0C17006g Debaryomyces hansenii
YALI1_F36706g	Compare to YALI0F29073g, similar to uniprot|Q8X0N0 Neurospora crassa conserved hypothetical protein and uniprot|P87126 Schizosaccharomyces pombe cell cycle control protein cwf2, similar to Saccharomyces cerevisiae CWC2 (YDL209C); ancestral locus Anc_8.466
YALI1_F36710g	Compare to YALI0F29095g, no similarity
YALI1_F36733g	Compare to YALI0F29139g, similar to uniprot|P47016 Saccharomyces cerevisiae YJL126w NIT2 nitrilase
YALI1_F36742g	Compare to YALI0F29161g, weakly similar to uniprot|Q12746 Saccharomyces cerevisiae YML125c unknown function or uniprot|Q04516 Saccharomyces cerevisiae YML087c unknown function, similar to Saccharomyces cerevisiae PGA3 (YML125C) and YML087C; ancestral locus Anc_8.862
YALI1_F36760g	Compare to YALI0F29183g, similar to uniprot|P32897 Saccharomyces cerevisiae YNR017w MAS6 mitochondrial inner membrane import translocase subunit, similar to Saccharomyces cerevisiae TIM23 (YNR017W); ancestral locus Anc_6.312
YALI1_F36794g	Compare to YALI0F29205g, similar to uniprot|P53720 Saccharomyces cerevisiae YNR015w SMM1 tRNA dihydrouridine synthase, similar to Saccharomyces cerevisiae SMM1 (YNR015W); ancestral locus Anc_6.310
YALI1_F36805g	Compare to YALI0F29227g, some similarities with uniprot|Q7SG59 Neurospora crassa, similar to Saccharomyces cerevisiae MSB1 (YOR188W); ancestral locus Anc_6.97
YALI1_F36882g	Compare to YALI0F29249g, weakly similar to uniprot|Q9P5P9 Neurospora crassa related to a-agglutinin core protein AGA1, similar to Saccharomyces cerevisiae RGS2 (YOR107W); ancestral locus Anc_2.173
YALI1_F36930g	Converted to coding from non-coding YALI0F29315g, similar to Saccharomyces cerevisiae YPL276W, similar to uniprot|O13437 Candida boidinii NAD- dependent formate dehydrogenase pseudogene
YALI1_F36966g	Truncated form of YALI0F29337g, similar to uniprot|P23542 Saccharomyces cerevisiae YLR027c AAT2 aspartate aminotransferase cytosolic and wi|NCU07941.1 Neurospora crassa
YALI1_F36996g	Compare to YALI0F29359g, weakly similar to uniprot|Q99296 Saccharomyces cerevisiae YLR149c unknown function, similar to Saccharomyces cerevisiae YLR149C; ancestral locus Anc_8.362
YALI1_F37011g	Compare to YALI0F29381g, some similarities with uniprot|O93914 Aspergillus niger PDI related protein A
YALI1_F37068g	Compare to YALI0F29491g, similar to uniprot|P36114 Saccharomyces cerevisiae YKR018c unknown function or uniprot|P47031 Saccharomyces cerevisiae YJL082w IML2 unknown function, similar to Saccharomyces cerevisiae IML2 (YJL082W) and YKR018C; ancestral locus Anc_1.285
YALI1_F37100g	Compare to YALI0F29513g, similar to Saccharomyces cerevisiae RGP1 (YDR137W); ancestral locus Anc_8.304, weakly similar to uniprot|P16664 Saccharomyces cerevisiae YDR137w RGP1 reduced growth phenotype protein
YALI1_F37194g	Compare to YALI0F29623g, weakly similar to ca|CA3761|CaIFR3 Candida albicans unknown function
YALI1_F37213g	Compare to YALI0F29645g, similar to Saccharomyces cerevisiae DUG3 (YNL191W); ancestral locus Anc_2.60, similar to uniprot|P53871 Saccharomyces cerevisiae YNL191w unknown function
YALI1_F37234g	Compare to YALI0F29667g, weakly similar to DEHA0G24948g Debaryomyces hansenii and CA2251|IPF12845 Candida albicans IPF12845 unknown function
YALI1_F37248g	Compare to YALI0F29678g, gnl|GLV|YALI0F29678g [Yarrowia lipolytica] similar to uniprot|P19956 Saccharomyces cerevisiae YMR225C Mitochondrial 60S ribosomal protein L44 (YmL44), similar to Saccharomyces cerevisiae MRPL44 (YMR225C); ancestral locus Anc_8.749
YALI1_F37255g	Compare to YALI0F29689g, some similarities with uniprot|P38316 Saccharomyces cerevisiae YBR217w APG12 component of the autophagic system, similar to Saccharomyces cerevisiae ATG12 (YBR217W); ancestral locus Anc_6.113
YALI1_F37272g	Compare to YALI0F29711g, weakly similar to uniprot|O94343 Schizosaccharomyces pombe putative MSF transporter and uniprot|O94019 Candida albicans transport protein
YALI1_F37320g	Compare to YALI0F29821g, similar to DEHA0C16368g Debaryomyces hansenii and CA3388|IPF6755 Candida albicans
YALI1_F37354g	Compare to YALI0F29843g, similar to Saccharomyces cerevisiae MES1 (YGR264C); ancestral locus Anc_5.41, similar to uniprot|P00958 Saccharomyces cerevisiae YGR264c MES1 methionyl-tRNA synthetase
YALI1_F37400g	Compare to YALI0F29865g, no similarity
YALI1_F37435g	Compare to YALI0F29887g, no similarity
YALI1_F37463g	Compare to YALI0F29909g, weakly similar to uniprot|Q03104 Saccharomyces cerevisiae YML128c GIN3 unknown function
YALI1_F37481g	Compare to YALI0F29931g, similar to Saccharomyces cerevisiae TIM22 (YDL217C); ancestral locus Anc_2.65, similar to uniprot|Q12328 Saccharomyces cerevisiae YDL217c TIM22 subunit of the TIM22-complex singleton
YALI1_F37498g	Compare to YALI0F29975g, weakly similar to uniprot|P38004 Chlamydia trachomatis 3- oxoacyl-[acyl-carrier protein] reductase
YALI1_F37508g	Compare to YALI0F29997g, similar to Saccharomyces cerevisiae RSC9 (YML127W); ancestral locus Anc_8.866, weakly similar to uniprot|Q03124 Saccharomyces cerevisiae YML127w RSC9 chromatin binding activity
YALI1_F37528g	Compare to YALI0F30004g, similar to Saccharomyces cerevisiae PKR1 (YMR123W); ancestral locus Anc_2.415,gnl|GLV|YALI0F30004g [Yarrowia lipolytica] similar to uniprot|Q03880 Saccharomyces cerevisiae YMR123W YM10 Hypothetical 14.0 kDa protein
YALI1_F37540g	Compare to YALI0F30011g, similar to Saccharomyces cerevisiae YLR363W-A; ancestral locus Anc_4.208,gnl|GLV|YALI0F30011g [Yarrowia lipolytica] similar to uniprot|Q872A1 Neurospora crassa probable ribosomal protein s25
YALI1_F37559g	Compare to YALI0F30019g, similar to Saccharomyces cerevisiae ADE6 (YGR061C); ancestral locus Anc_4.207, similar to uniprot|P38972 Saccharomyces cerevisiae YGR061c ADE6 5 -phosphoribosylformyl glycinamidine synthetase
YALI1_F37627g	Compare to YALI0F30041g, similar to uniprot|Q06593 Saccharomyces cerevisiae YPR194c OPT2 oligopeptide transporter
YALI1_F37658g	Compare to YALI0F30063g, similar to Saccharomyces cerevisiae AVT1 (YJR001W); ancestral locus Anc_5.220, similar to uniprot|P47082 Saccharomyces cerevisiae YJR001w AVT1 neutral amino acid transporter
YALI1_F37685g	Compare to YALI0F30085g, similar to Saccharomyces cerevisiae YBR141C; ancestral locus Anc_3.123, similar to CAGL0A03674g Candida glabrata
YALI1_F37694g	Compare to YALI0F30107g, no similarity possibly noncoding
YALI1_F37714g	Compare to YALI0F30129g, similar to Saccharomyces cerevisiae PNP1 (YLR209C); ancestral locus Anc_7.337, similar to uniprot|Q9UTG1 Schizosaccharomyces pombe PNP1 putative purine nucleoside phosphorylase
YALI1_F37734g	Compare to YALI0F30151g, similar to uniprot|Q04491 Saccharomyces cerevisiae YLR208w SEC13 protein transport protein, similar to Saccharomyces cerevisiae SEC13 (YLR208W); ancestral locus Anc_7.338
YALI1_F37742g	Compare to YALI0F30173g, similar to uniprot|Q02939 Saccharomyces cerevisiae YPL122c TFB2 TFIIH subunit (transcription/repair factor), similar to Saccharomyces cerevisiae TFB2 (YPL122C); ancestral locus Anc_8.620
YALI1_F37770g	Compare to YALI0F30195g, weakly similar to DEHA0E05412g Debaryomyces hansenii, similar to Saccharomyces cerevisiae YLR287C; ancestral locus Anc_6.82
YALI1_F37775g	Compare to YALI0F30217g, highly similar to uniprot|Q8X230 Emericella nidulans VpsA GTPase
YALI1_F37808g	Compare to YALI0F30239g, no similarity
YALI1_F37828g	Compare to YALI0F30261g, some similarities with uniprot|O60177 Schizosaccharomyces pombe DEAD box helicase
YALI1_F37878g	Compare to YALI0F30283g, similar to Saccharomyces cerevisiae ARV1 (YLR242C); ancestral locus Anc_8.399, similar to CA6119|CaARV1 Candida albicans CaARV1 involved in sterol uptake and distribution into the plasma membrane
YALI1_F37890g	Compare to YALI0F30305g, similar to Saccharomyces cerevisiae HCR1 (YLR192C); ancestral locus Anc_7.363, similar to uniprot|Q05775 Saccharomyces cerevisiae YLR192c HCR1 component of translation initiation factor eIF3
YALI1_F37892g	Compare to YALI0F30327g, similar to Saccharomyces cerevisiae CTM1 (YHR109W); ancestral locus Anc_5.419, some similarities with uniprot|P38818 Saccharomyces cerevisiae YHR109w CTM1 cytochrome c methyltransferase
YALI1_F37916g	Compare to YALI0F30349g, similar to Saccharomyces cerevisiae APA1 (YCL050C) and APA2 (YDR530C); ancestral locus Anc_1.17, similar to uniprot|P49348 Kluyveromyces lactis APA2 5 5- P-1 P-4-tetraphosphate phosphorylase II
YALI1_F37929g	Compare to YALI0F30371g, similar to Saccharomyces cerevisiae YBR270C and BIT61 (YJL058C); ancestral locus Anc_1.323, weakly similar to uniprot|Q8WZY9 Neurospora crassa conserved hypothetical protein
YALI1_F37963g	Compare to YALI0F30393g, similar to uniprot|P25586 Saccharomyces cerevisiae YCL059c KRR1 unknown function, similar to Saccharomyces cerevisiae KRR1 (YCL059C); ancestral locus Anc_1.6
YALI1_F37986g	Compare to YALI0F30415g, similar to Saccharomyces cerevisiae YHC3 (YJL059W); ancestral locus Anc_1.322, similar to uniprot|P47040 Saccharomyces cerevisiae YJL059w YHC3 unknown function
YALI1_F37998g	Compare to YALI0F30426g, similar to Saccharomyces cerevisiae LSM7 (YNL147W); ancestral locus Anc_2.119,gnl|GLV|YALI0F30426g [Yarrowia lipolytica] similar to uniprot|P53905 Saccharomyces cerevisiae YNL147W U6 snRNA-associated Sm-like protein LSm3
YALI1_F38013g	Compare to YALI0F30437g, no similarity
YALI1_F38088g	Compare to YALI0F30459g, similar to Saccharomyces cerevisiae YIL108W; ancestral locus Anc_2.263, similar to uniprot|P40483 Saccharomyces cerevisiae YIL108w unknown function
YALI1_F38116g	Compare to YALI0F30481g, similar to Saccharomyces cerevisiae ERG13 (YML126C); ancestral locus Anc_8.864, similar to uniprot|P54839 Saccharomyces cerevisiae YML126c HMGS 3-hydroxy-3-methylglutaryl coenzyme A synthase
YALI1_F38140g	Compare to YALI0F30503g, no similarity
YALI1_F38161g	Compare to YALI0F30525g, similar to Saccharomyces cerevisiae TRF5 (YNL299W) and PAP2 (YOL115W); ancestral locus Anc_3.58, weakly similar to uniprot|P48561 Saccharomyces cerevisiae YNL299w TRF5 nuclear division protein
YALI1_F38191g	Compare to YALI0F30547g, similar to uniprot|P39721 Saccharomyces cerevisiae YAL049c unknown function, similar to Saccharomyces cerevisiae YAL049C; ancestral locus Anc_7.18
YALI1_F38220g	Compare to YALI0F30569g, similar to uniprot|P17064 Saccharomyces cerevisiae YER056c FCY2 purine-cytosine permease
YALI1_F38248g	Compare to YALI0F30591g, weakly similar to uniprot|P24552 Fusarium solani D- amino acid oxidase
YALI1_F38263g	Compare to YALI0F30613g, similar to uniprot|Q9P5M9 Schizosaccharomyces pombe putative class II aldolase
YALI1_F38280g	Compare to YALI0F30635g, no similarity
YALI1_F38296g	Compare to YALI0F30657g, no similarity
YALI1_F38317g	Compare to YALI0F30679g, similar to Saccharomyces cerevisiae CEM1 (YER061C); ancestral locus Anc_7.242, similar to uniprot|P39525 Saccharomyces cerevisiae YER061c CEM1 3-oxoacyl-[acyl-carrier protein] synthase
YALI1_F38339g	Compare to YALI0F30701g, weakly similar to uniprot|Q02795 Saccharomyces cerevisiae YMR149w SWP1 oligosaccharyltransferase delta subunit, similar to Saccharomyces cerevisiae SWP1 (YMR149W); ancestral locus Anc_2.375
YALI1_F38344g	Compare to YALI0F30723g, weakly similar to uniprot|Q8R1G1 Mus musculus protein C20orf13 homolog and uniprot|Q9P6N7 Schizosaccharomyces pombe similar to L-asparaginase
YALI1_F38386g	Compare to YALI0F30745g, similar to uniprot|Q9HFV0 Yarrowia lipolytica C1- THFS protein and uniprot|P09440 Saccharomyces cerevisiae YBR084w MIS1 C1-tetrahydrofolate synthase
YALI1_F38432g	Compare to YALI0F30767g, weakly similar to uniprot|P43571 Saccharomyces cerevisiae YFL025c BST1 negative regulator of COPII vesicle formation
YALI1_F38450g	Truncated form of YALI0F30789g, no similarity
YALI1_F38466g	Compare to YALI0F30811g, similar to Saccharomyces cerevisiae ARA2 (YMR041C); ancestral locus Anc_2.604, similar to uniprot|Q04212 Saccharomyces cerevisiae YMR041c unknown function
YALI1_F38476g	Compare to YALI0F30833g, similar to Saccharomyces cerevisiae CDA2 (YLR308W); ancestral locus Anc_4.47, similar to uniprot|Q06702 Saccharomyces cerevisiae YLR307w CDA1 sporulation-specific chitin deacetylase
YALI1_F38522g	Compare to YALI0F30855g, similar to Saccharomyces cerevisiae IMH1 (YLR309C); ancestral locus Anc_4.46, weakly similar to uniprot|Q06704 Saccharomyces cerevisiae YLR309c IMH1 involved in vesicular transport
YALI1_F38526g	Compare to YALI0F30877g, similar to Saccharomyces cerevisiae CCS1 (YMR038C); ancestral locus Anc_2.600, similar to uniprot|P40202 Saccharomyces cerevisiae YMR038c LYS7 copper chaperone for superoxide dismutase
YALI1_F38538g	Compare to YALI0F30899g, similar to Saccharomyces cerevisiae GRX1 (YCL035C) and GRX2 (YDR513W); ancestral locus Anc_1.38, weakly similar to uniprot|P17695 Saccharomyces cerevisiae YDR513w TTR1 glutaredoxin P2.431.f2.1
YALI1_F38551g	Compare to YALI0F30921g, weakly similar to uniprot|Q07660 Saccharomyces cerevisiae YDL231c BRE4, similar to Saccharomyces cerevisiae BRE4 (YDL231C); ancestral locus Anc_2.38
YALI1_F38595g	Compare to YALI0F30943g, weakly similar to uniprot|P25044 Saccharomyces cerevisiae YDL230w PTP1 protein tyrosine phosphatase, similar to Saccharomyces cerevisiae PTP1 (YDL230W); ancestral locus Anc_2.39
YALI1_F38614g	Compare to YALI0F30965g, no similarity
YALI1_F38629g	Truncated form of YALI0F30987g, similar to uniprot|Q9HDP7 Emericella nidulans Catalase
YALI1_F38670g	Compare to YALI0F31009g, highly similar to uniprot|P38116 Saccharomyces cerevisiae YBR164c ADP-ribosylation factor, similar to Saccharomyces cerevisiae UBS1 (YBR165W); ancestral locus Anc_8.596
YALI1_F38680g	Compare to YALI0F31020g, gnl|GLV|YALI0F31020g [Yarrowia lipolytica] weakly similar to gi|46137113 Aspergillus nidulans hypothetical protein AN1350.2 FGSC A4 and to uniprot|Q9UU80 Schizosaccharomyces pombe Cell cycle control protein cwf18
YALI1_F38684g	Compare to YALI0F31031g, similar to uniprot|Q08685 Saccharomyces cerevisiae YOR250c CLP1 cleavage/polyadenylation factor IA subunit, similar to Saccharomyces cerevisiae CLP1 (YOR250C); ancestral locus Anc_8.690
YALI1_F38756g	Compare to YALI0F31053g, similar to uniprot|P32333 Saccharomyces cerevisiae YPL082c MOT1 transcriptional accessory protein
YALI1_F38776g	Compare to YALI0F31075g, uniprot|Q12726 Yarrowia lipolytica Homocitrate synthase
YALI1_F38806g	Compare to YALI0F31097g, no similarity
YALI1_F38820g	Compare to YALI0F31119g, similar to uniprot|P32563 Saccharomyces cerevisiae YOR270c VPH1 H+-ATPase V0 domain 95K subunit
YALI1_F38856g	Compare to YALI0F31141g, similar to Saccharomyces cerevisiae DCS1 (YLR270W) and DCS2 (YOR173W); ancestral locus Anc_6.63, similar to uniprot|Q06151 Saccharomyces cerevisiae YLR270w Scavenger mRNA decapping enzyme
YALI1_F38859g	Compare to YALI0F31163g, some similarities with DEHA0D11220g Debaryomyces hansenii
YALI1_F38869g	Compare to YALI0F31185g, some similarities with DEHA0D16104g Debaryomyces hansenii
YALI1_F38882g	Compare to YALI0F31207g, similar to Saccharomyces cerevisiae TOM40 (YMR203W); ancestral locus Anc_6.302, similar to uniprot|P23644 Saccharomyces cerevisiae YMR203w TOM40 forms the hydrophilic channel of the mitochondrial import pore for preproteins
YALI1_F38918g	Compare to YALI0F31229g, no similarity
YALI1_F38954g	Compare to YALI0F31251g, some similarities with uniprot|Q96WX5 Botrytis cinerea Bc-hch
YALI1_F38986g	Compare to YALI0F31273g, similar to Saccharomyces cerevisiae FUR1 (YHR128W); ancestral locus Anc_2.118, highly similar to uniprot|P18562 Saccharomyces cerevisiae YHR128w FUR1 uracil phosphoribosyltransferase
YALI1_F38998g	Compare to YALI0F31295g, some similarities with uniprot|Q7SFY3 Neurospora crassa NCU03111.1
YALI1_F39001g	Compare to YALI0F31317g, similar to Saccharomyces cerevisiae MRT4 (YKL009W); ancestral locus Anc_2.498, similar to uniprot|P33201 Saccharomyces cerevisiae YKL009w MRT4 mRNA turnover 4
YALI1_F39009g	Compare to YALI0F31339g, weakly similar to uniprot|Q9C1K9 Neurospora crassa NCU06553.1 hypothetical protein (AF309689) protein G6G8.9
YALI1_F39022g	Compare to YALI0F31361g, no similarity
YALI1_F39041g	Compare to YALI0F31383g, similar to Saccharomyces cerevisiae RIO2 (YNL207W); ancestral locus Anc_2.44, similar to uniprot|P40160 Saccharomyces cerevisiae YNL207w
YALI1_F39051g	Compare to YALI0F31405g, similar to uniprot|P41056 Saccharomyces cerevisiae YOR234c RPL37B ribosomal protein L35a.e.c15, similar to Saccharomyces cerevisiae RPL33B (YOR234C) and RPL33A (YPL143W); ancestral locus Anc_8.655
YALI1_F39058g	Compare to YALI0F31427g, similar to uniprot|Q99042 Trigonopsis variabilis D- amino acid oxidase and DEHA0B06754g Debaryomyces hansenii IPF 9691.1
YALI1_F39106g	Compare to YALI0F31449g, similar to Saccharomyces cerevisiae URB2 (YJR041C); ancestral locus Anc_1.467, weakly similar to KLLA0E22583g Kluyveromyces lactis IPF 2424.1
YALI1_F39108g	Compare to YALI0F31471g, similar to Saccharomyces cerevisiae UTP18 (YJL069C); ancestral locus Anc_1.305, similar to DEHA0F17490g Debaryomyces hansenii IPF 7716.1 and uniprot|P40362 Saccharomyces cerevisiae YJL069c
YALI1_F39128g	Compare to YALI0F31493g, similar to Saccharomyces cerevisiae DBP9 (YLR276C); ancestral locus Anc_6.73, similar to uniprot|Q66R46 Saccharomyces cerevisiae YLR276c DBP9 ATP dependent RNA helicase activity
YALI1_F39159g	Compare to YALI0F31515g, no similarity
YALI1_F39164g	Compare to YALI0F31537g, similar to Saccharomyces cerevisiae YNL165W; ancestral locus Anc_2.89, no similarity
YALI1_F39176g	Compare to YALI0F31548g, gnl|GLV|YALI0F31548g [Yarrowia lipolytica] similar to uniprot|O60200 S. cerevisiae YKL053C-A Mitochondrial Distribution and Morphology MDM35, similar to Saccharomyces cerevisiae MDM35 (YKL053C-A); ancestral locus Anc_2.587
YALI1_F39183g	Compare to YALI0F31559g, weakly similar to uniprot|P53921 Saccharomyces cerevisiae YNL122c hypothetical protein
YALI1_F39199g	Compare to YALI0F31581g, no similarity possibly noncoding
YALI1_F39236g	Compare to YALI0F31603g, similar to uniprot|P53920 Saccharomyces cerevisiae YNL123w Hypothetical 110.9 kDa protein
YALI1_F39242g	Compare to YALI0F31625g, some similarities with uniprot|Q03433 Saccharomyces cerevisiae YML041c, similar to Saccharomyces cerevisiae VPS71 (YML041C); ancestral locus Anc_5.511
YALI1_F39261g	Compare to YALI0F31647g, no similarity
YALI1_F39272g	Compare to YALI0F31669g, similar to uniprot|P25385 Saccharomyces cerevisiae YLR078c BOS1 secretory pathway protein, similar to Saccharomyces cerevisiae BOS1 (YLR078C); ancestral locus Anc_8.6
YALI1_F39291g	Converted to coding from non-coding YALI0F31691g, similar to uniprot|P53266 Saccharomyces cerevisiae YGR112w SHY1 SURF homologue protein, similar to Saccharomyces cerevisiae SHY1 (YGR112W); ancestral locus Anc_3.457
YALI1_F39314g	Compare to YALI0F31713g, no similarity
YALI1_F39330g	Compare to YALI0F31735g, highly similar to uniprot|Q9P839 Candida albicans RNR1 ribonucleotide reductase large subunit
YALI1_F39375g	Converted to coding from non-coding YALI0F31757g, uniprot|Q8NIP3 Yarrowia lipolytica Reverse transcriptase
YALI1_F39426g	Compare to YALI0F31845g, similar to uniprot|P39109 Saccharomyces cerevisiae YDR135c YCF1 glutathione S-conjugate transporter
YALI1_F39457g	Compare to YALI0F31867g, weakly similar to uniprot|Q9I5L7 Pseudomonas aeruginosa Hypothetical protein PA0711
YALI1_F39527g	Compare to YALI0F31911g, uniprot|O14440 GTPase activating protein, similar to Saccharomyces cerevisiae GYP7 (YDL234C); ancestral locus Anc_2.30
YALI1_F39550g	Compare to YALI0F31933g, weakly similar to uniprot|Q12523 Saccharomyces cerevisiae YPL247c unknown function, similar to Saccharomyces cerevisiae YPL247C; ancestral locus Anc_6.276
YALI1_F39557g	Compare to YALI0F31955g, weakly similar to uniprot|P15731 Saccharomyces cerevisiae YBR082c UBC4 E2 ubiquitin-conjugating enzyme
YALI1_F39603g	Compare to YALI0F31977g, some similarities with uniprot|P35187 Saccharomyces cerevisiae YMR190c SGS1 DNA helicase, similar to Saccharomyces cerevisiae SGS1 (YMR190C); ancestral locus Anc_6.278
YALI1_F39620g	Compare to YALI0F31999g, similar to uniprot|Q12031 Saccharomyces cerevisiae YPR006c ICL2 non-functional isocitrate lyase
YALI1_F39645g	Compare to YALI0F32021g, similar to Saccharomyces cerevisiae OXA1 (YER154W); ancestral locus Anc_8.206, similar to uniprot|P39952 Saccharomyces cerevisiae YER154w OXA1 cytochrome oxidase biogenesis protein
YALI1_F39665g	Compare to YALI0F32043g, similar to Saccharomyces cerevisiae BEM2 (YER155C); ancestral locus Anc_8.207, weakly similar to CAGL0I06512g Candida glabrata and uniprot|P39960 Saccharomyces cerevisiae YER155c BEM2 GTPase- activating protein
YALI1_F39789g	Compare to YALI0F32065g, no similarity
YALI1_F39844g	Truncated form of YALI0F32131g, similar to uniprot|CAD70715 Yarrowia lipolytica lipase
YALI1_F39885g	Compare to YALI0F32153g, similar to Saccharomyces cerevisiae TAF1 (YGR274C); ancestral locus Anc_5.25, similar to uniprot|P46677 Saccharomyces cerevisiae YGR274c TAF145 TFIID subunit (TBP-associated factor)
YALI1_F39891g	Compare to YALI0F32175g, no similarity