-- dump date 20140620_073927 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_005743403.1 384860683 12331560 1..1362 1 NC_017341.1 chromosomal replication initiator protein DnaA 1362 dnaA 12331560 dnaA Staphylococcus aureus subsp. aureus str. JKD6008 chromosomal replication initiator protein DnaA YP_005743403.1 1 D 546342 CDS YP_005743404.1 384860684 12331562 1640..2773 1 NC_017341.1 DNA-directed DNA polymerase beta subunit 2773 dnaN 12331562 dnaN Staphylococcus aureus subsp. aureus str. JKD6008 DNA-directed DNA polymerase beta subunit YP_005743404.1 1640 D 546342 CDS YP_005743405.1 384860685 12331564 3163..3399 1 NC_017341.1 hypothetical protein 3399 12331564 SAA6008_00003 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743405.1 3163 D 546342 CDS YP_005743406.1 384860686 12331566 3396..4508 1 NC_017341.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA; DNA repair and genetic recombination protein 4508 recF 12331566 recF Staphylococcus aureus subsp. aureus str. JKD6008 DNA repair and genetic recombination protein YP_005743406.1 3396 D 546342 CDS YP_005743407.1 384860687 12331568 4518..6452 1 NC_017341.1 TIGRFAM: DNA gyrase, B subunit PFAM: DNA gyrase, subunit B domain protein; ATP-binding region, ATPase domain protein domain protein; TOPRIM domain protein; DNA topoisomerase, type IIA, subunit B, region 2 domain protein SMART: DNA topoisomerase II; DNA topoisomerase subunit B 6452 gyrB 12331568 gyrB Staphylococcus aureus subsp. aureus str. JKD6008 DNA topoisomerase subunit B YP_005743407.1 4518 D 546342 CDS YP_005743408.1 384860688 12331570 6489..9149 1 NC_017341.1 DNA topoisomerase subunit A 9149 gyrA 12331570 gyrA Staphylococcus aureus subsp. aureus str. JKD6008 DNA topoisomerase subunit A YP_005743408.1 6489 D 546342 CDS YP_005743409.1 384860689 12331572 complement(9237..10067) 1 NC_017341.1 carbohydrate kinase 10067 12331572 SAA6008_00007 Staphylococcus aureus subsp. aureus str. JKD6008 carbohydrate kinase YP_005743409.1 9237 R 546342 CDS YP_005743410.1 384860690 12331574 10375..11889 1 NC_017341.1 catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase 11889 hutH 12331574 hutH Staphylococcus aureus subsp. aureus str. JKD6008 histidine ammonia-lyase YP_005743410.1 10375 D 546342 CDS YP_005743411.1 384860691 12331576 12267..13553 1 NC_017341.1 seryl-tRNA synthetase 13553 serS 12331576 serS Staphylococcus aureus subsp. aureus str. JKD6008 seryl-tRNA synthetase YP_005743411.1 12267 D 546342 CDS YP_005743412.1 384860692 12329920 14197..14892 1 NC_017341.1 branched-chain amino acid permease 14892 azlC 12329920 azlC Staphylococcus aureus subsp. aureus str. JKD6008 branched-chain amino acid permease YP_005743412.1 14197 D 546342 CDS YP_005743413.1 384860693 12329921 14970..15218 1 NC_017341.1 Branched-chain amino acid transport protein, AzlD 15218 azlD 12329921 azlD Staphylococcus aureus subsp. aureus str. JKD6008 Branched-chain amino acid transport protein, AzlD YP_005743413.1 14970 D 546342 CDS YP_005743414.1 384860694 12329922 15580..16548 1 NC_017341.1 homoserine O-acetyltransferase 16548 metX 12329922 metX Staphylococcus aureus subsp. aureus str. JKD6008 homoserine O-acetyltransferase YP_005743414.1 15580 D 546342 CDS YP_005743415.1 384860695 12329923 16856..17779 1 NC_017341.1 hypothetical protein 17779 12329923 SAA6008_00013 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743415.1 16856 D 546342 CDS YP_005743416.1 384860696 12329924 17794..19761 1 NC_017341.1 Contains a modified GGDEF domain and a DHH domainPossibly involved in signal transduction mechanisms; putative bifunctional signaling protein/50S ribosomal protein L9 19761 12329924 SAA6008_00014 Staphylococcus aureus subsp. aureus str. JKD6008 putative bifunctional signaling protein/50S ribosomal protein L9 YP_005743416.1 17794 D 546342 CDS YP_005743417.1 384860697 12329925 19758..20204 1 NC_017341.1 50S ribosomal protein L9 20204 rplI 12329925 rplI Staphylococcus aureus subsp. aureus str. JKD6008 50S ribosomal protein L9 YP_005743417.1 19758 D 546342 CDS YP_005743418.1 384860698 12329926 20236..21636 1 NC_017341.1 replicative DNA helicase DnaB 21636 dnaC 12329926 dnaC Staphylococcus aureus subsp. aureus str. JKD6008 replicative DNA helicase DnaB YP_005743418.1 20236 D 546342 CDS YP_005743419.1 384860699 12329927 21915..23198 1 NC_017341.1 putative adenylosuccinate synthetase 23198 purA 12329927 purA Staphylococcus aureus subsp. aureus str. JKD6008 putative adenylosuccinate synthetase YP_005743419.1 21915 D 546342 CDS YP_005743420.1 384860700 12329930 24388..25089 1 NC_017341.1 also known as vicR and yycF; transcriptional regulator WalR 25089 walR 12329930 walR Staphylococcus aureus subsp. aureus str. JKD6008 transcriptional regulator WalR YP_005743420.1 24388 D 546342 CDS YP_005743421.1 384860701 12329931 25102..26928 1 NC_017341.1 Also known as VicK and YycG; multi-sensor signal transduction histidine kinase, WalK 26928 walK 12329931 walK Staphylococcus aureus subsp. aureus str. JKD6008 multi-sensor signal transduction histidine kinase, WalK YP_005743421.1 25102 D 546342 CDS YP_005743422.1 384860702 12329932 26921..28255 1 NC_017341.1 two-component regulator YycH 28255 yycH 12329932 yycH Staphylococcus aureus subsp. aureus str. JKD6008 two-component regulator YycH YP_005743422.1 26921 D 546342 CDS YP_005743423.1 384860703 12329933 28256..29044 1 NC_017341.1 Possible negative regulator of walKR two-component response regulator; regulatory protein YycI 29044 yycI 12329933 yycI Staphylococcus aureus subsp. aureus str. JKD6008 regulatory protein YycI YP_005743423.1 28256 D 546342 CDS YP_005743424.1 384860704 12329934 29450..30232 1 NC_017341.1 metallo-beta-lactamase hydrolase 30232 yycJ 12329934 yycJ Staphylococcus aureus subsp. aureus str. JKD6008 metallo-beta-lactamase hydrolase YP_005743424.1 29450 D 546342 CDS YP_005743425.1 384860705 12329935 30459..32777 1 NC_017341.1 putative LPXTG surface 5'-nucleotidase 32777 sasH 12329935 sasH Staphylococcus aureus subsp. aureus str. JKD6008 putative LPXTG surface 5'-nucleotidase YP_005743425.1 30459 D 546342 CDS YP_005743426.1 384860706 12329936 complement(33009..33158) 1 NC_017341.1 Orthologs present in other SA genomes with alternative initiation codon.; hypothetical protein 33158 12329936 SAA6008_00024 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743426.1 33009 R 546342 CDS YP_005743427.1 384860707 12329937 33145..33624 1 NC_017341.1 rRNA large subunit methyltransferase 33624 12329937 SAA6008_00025 Staphylococcus aureus subsp. aureus str. JKD6008 rRNA large subunit methyltransferase YP_005743427.1 33145 D 546342 CDS YP_005743428.1 384860708 12329938 33859..35094 1 NC_017341.1 hypothetical protein 35094 12329938 SAA6008_00026 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743428.1 33859 D 546342 CDS YP_005743429.1 384860709 12329939 35124..35798 1 NC_017341.1 transposase for IS431mec 35798 12329939 SAA6008_00027 Staphylococcus aureus subsp. aureus str. JKD6008 transposase for IS431mec YP_005743429.1 35124 D 546342 CDS YP_005743430.1 384860710 12329940 complement(35830..36069) 1 NC_017341.1 hypothetical protein 36069 12329940 SAA6008_00028 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743430.1 35830 R 546342 CDS YP_005743431.1 384860711 12329941 complement(36584..37258) 1 NC_017341.1 transposase for IS431mec 37258 12329941 SAA6008_00029 Staphylococcus aureus subsp. aureus str. JKD6008 transposase for IS431mec YP_005743431.1 36584 R 546342 CDS YP_005743432.1 384860712 12329943 complement(38577..39839) 1 NC_017341.1 plasmid recombination enzyme 39839 pre 12329943 pre Staphylococcus aureus subsp. aureus str. JKD6008 plasmid recombination enzyme YP_005743432.1 38577 R 546342 CDS YP_005743433.1 384860713 12329944 complement(40346..40750) 1 NC_017341.1 bleomycin resistance protein 40750 12329944 SAA6008_00033 Staphylococcus aureus subsp. aureus str. JKD6008 bleomycin resistance protein YP_005743433.1 40346 R 546342 CDS YP_005743434.1 384860714 12329945 complement(40967..41710) 1 NC_017341.1 kanamycin nucleotidyltransferase 41710 12329945 SAA6008_00034 Staphylococcus aureus subsp. aureus str. JKD6008 kanamycin nucleotidyltransferase YP_005743434.1 40967 R 546342 CDS YP_005743435.1 384860715 12329946 complement(41930..42604) 1 NC_017341.1 transposase for IS431mec 42604 12329946 SAA6008_00035 Staphylococcus aureus subsp. aureus str. JKD6008 transposase for IS431mec YP_005743435.1 41930 R 546342 CDS YP_005743436.1 384860716 12329947 42862..43029 1 NC_017341.1 hypothetical protein 43029 12329947 SAA6008_00036 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743436.1 42862 D 546342 CDS YP_005743437.1 384860717 12329948 43826..44569 1 NC_017341.1 PFAM: glycerophosphoryl diester phosphodiesterase KEGG: sha:SH0089 hypothetical protein; glycerophosphoryl diester phosphodiesterase, UgpQ_1 44569 ugpQ_1 12329948 ugpQ_1 Staphylococcus aureus subsp. aureus str. JKD6008 glycerophosphoryl diester phosphodiesterase, UgpQ_1 YP_005743437.1 43826 D 546342 CDS YP_005743438.1 384860718 12329949 44666..45094 1 NC_017341.1 MaoC domain-containing protein dehydratase 45094 maoC 12329949 maoC Staphylococcus aureus subsp. aureus str. JKD6008 MaoC domain-containing protein dehydratase YP_005743438.1 44666 D 546342 CDS YP_005743439.1 384860719 12329950 complement(45140..47146) 1 NC_017341.1 penicillin-binding protein 2 prime 47146 mecA 12329950 mecA Staphylococcus aureus subsp. aureus str. JKD6008 penicillin-binding protein 2 prime YP_005743439.1 45140 R 546342 CDS YP_005743440.1 384860720 12329951 47246..49003 1 NC_017341.1 methicillin-resistance regulatory protein MecR1 49003 mecR1 12329951 mecR1 Staphylococcus aureus subsp. aureus str. JKD6008 methicillin-resistance regulatory protein MecR1 YP_005743440.1 47246 D 546342 CDS YP_005743441.1 384860721 12329952 49003..49374 1 NC_017341.1 methicillin resistance repressor MecI 49374 mecI 12329952 mecI Staphylococcus aureus subsp. aureus str. JKD6008 methicillin resistance repressor MecI YP_005743441.1 49003 D 546342 CDS YP_005743442.1 384860722 12329953 49882..50991 1 NC_017341.1 Contains a XylR carbohydrate kinase domain; xylose operon repressor 50991 xylR 12329953 xylR Staphylococcus aureus subsp. aureus str. JKD6008 xylose operon repressor YP_005743442.1 49882 D 546342 CDS YP_005743443.1 384860723 12329955 complement(52472..53536) 1 NC_017341.1 rhodanese-like domain-containing protein 53536 12329955 SAA6008_00045 Staphylococcus aureus subsp. aureus str. JKD6008 rhodanese-like domain-containing protein YP_005743443.1 52472 R 546342 CDS YP_005743444.1 384860724 12329956 53672..53932 1 NC_017341.1 hypothetical protein 53932 12329956 SAA6008_00046 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743444.1 53672 D 546342 CDS YP_005743445.1 384860725 12329957 53947..54576 1 NC_017341.1 hypothetical protein 54576 12329957 SAA6008_00047 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743445.1 53947 D 546342 CDS YP_005743446.1 384860726 12329958 complement(54844..55461) 1 NC_017341.1 cadmium resistance permease, CadD 55461 cadD 12329958 cadD Staphylococcus aureus subsp. aureus str. JKD6008 cadmium resistance permease, CadD YP_005743446.1 54844 R 546342 CDS YP_005743447.1 384860727 12329959 complement(55542..57956) 1 NC_017341.1 cadmium-transporting ATPase, CadA 57956 cadA 12329959 cadA Staphylococcus aureus subsp. aureus str. JKD6008 cadmium-transporting ATPase, CadA YP_005743447.1 55542 R 546342 CDS YP_005743448.1 384860728 12329960 complement(57949..58314) 1 NC_017341.1 putative cadmium efflux system accessory protein 58314 cadX 12329960 cadX Staphylococcus aureus subsp. aureus str. JKD6008 putative cadmium efflux system accessory protein YP_005743448.1 57949 R 546342 CDS YP_005743449.1 384860729 12329961 complement(58552..58929) 1 NC_017341.1 transposase for transposon Tn554 58929 tnpC_1 12329961 tnpC_1 Staphylococcus aureus subsp. aureus str. JKD6008 transposase for transposon Tn554 YP_005743449.1 58552 R 546342 CDS YP_005743450.1 384860730 12329962 complement(58936..60828) 1 NC_017341.1 transposition regulatory protein TnpB_1 60828 tnpB_1 12329962 tnpB_1 Staphylococcus aureus subsp. aureus str. JKD6008 transposition regulatory protein TnpB_1 YP_005743450.1 58936 R 546342 CDS YP_005743451.1 384860731 12329963 complement(61023..61310) 1 NC_017341.1 possible remnant of radC-like protein; hypothetical protein 61310 12329963 SAA6008_00053 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743451.1 61023 R 546342 CDS YP_005743452.1 384860732 12329964 complement(61339..61545) 1 NC_017341.1 ortholog of Staphylococcus epidermidis hypothetical protein; hypothetical protein 61545 12329964 SAA6008_00054 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743452.1 61339 R 546342 CDS YP_005743453.1 384860733 12329965 complement(61547..62068) 1 NC_017341.1 hypothetical protein 62068 12329965 SAA6008_00055 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743453.1 61547 R 546342 CDS YP_005743454.1 384860734 12329966 complement(62087..62482) 1 NC_017341.1 hypothetical protein 62482 12329966 SAA6008_00056 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743454.1 62087 R 546342 CDS YP_005743455.1 384860735 12329967 complement(62483..62833) 1 NC_017341.1 hypothetical protein 62833 12329967 SAA6008_9980 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743455.1 62483 R 546342 CDS YP_005743456.1 384860736 12329968 complement(63304..64932) 1 NC_017341.1 cassette chromosome recombinase B 64932 ccrB 12329968 ccrB Staphylococcus aureus subsp. aureus str. JKD6008 cassette chromosome recombinase B YP_005743456.1 63304 R 546342 CDS YP_005743457.1 384860737 12329969 complement(64953..66299) 1 NC_017341.1 cassette chromosome recombinase A1 66299 ccrA 12329969 ccrA Staphylococcus aureus subsp. aureus str. JKD6008 cassette chromosome recombinase A1 YP_005743457.1 64953 R 546342 CDS YP_005743458.1 384860738 12329970 complement(66857..68644) 1 NC_017341.1 hypothetical protein 68644 12329970 SAA6008_00060 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743458.1 66857 R 546342 CDS YP_005743459.1 384860739 12329971 complement(68644..68928) 1 NC_017341.1 hypothetical protein 68928 12329971 SAA6008_00061 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743459.1 68644 R 546342 CDS YP_005743460.1 384860740 12329972 69065..70096 1 NC_017341.1 hypothetical protein 70096 12329972 SAA6008_00062 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743460.1 69065 D 546342 CDS YP_005743461.1 384860741 12329973 70166..70738 1 NC_017341.1 hypothetical protein 70738 12329973 SAA6008_00063 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743461.1 70166 D 546342 CDS YP_005743462.1 384860742 12329974 71093..72793 1 NC_017341.1 putative restriction enzyme 72793 12329974 SAA6008_00064 Staphylococcus aureus subsp. aureus str. JKD6008 putative restriction enzyme YP_005743462.1 71093 D 546342 CDS YP_005743463.1 384860743 12329975 72786..73826 1 NC_017341.1 putative restriction enzyme 73826 12329975 SAA6008_00065 Staphylococcus aureus subsp. aureus str. JKD6008 putative restriction enzyme YP_005743463.1 72786 D 546342 CDS YP_005743464.1 384860744 12329976 74257..74415 1 NC_017341.1 hypothetical protein 74415 12329976 SAA6008_00066 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743464.1 74257 D 546342 CDS YP_005743465.1 384860745 12329978 complement(75254..76225) 1 NC_017341.1 amidohydrolase 76225 12329978 SAA6008_00068 Staphylococcus aureus subsp. aureus str. JKD6008 amidohydrolase YP_005743465.1 75254 R 546342 CDS YP_005743466.1 384860746 12329979 complement(76278..76649) 1 NC_017341.1 hypothetical protein 76649 12329979 SAA6008_00069 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743466.1 76278 R 546342 CDS YP_005743467.1 384860747 12329980 complement(76669..78060) 1 NC_017341.1 major facilitator superfamily multidrug :cation symporter 78060 12329980 SAA6008_00070 Staphylococcus aureus subsp. aureus str. JKD6008 major facilitator superfamily multidrug :cation symporter YP_005743467.1 76669 R 546342 CDS YP_005743468.1 384860748 12329983 79027..79602 1 NC_017341.1 TetR family transcriptional regulator 79602 12329983 SAA6008_00073 Staphylococcus aureus subsp. aureus str. JKD6008 TetR family transcriptional regulator YP_005743468.1 79027 D 546342 CDS YP_005743469.1 384860749 12329984 80150..80545 1 NC_017341.1 GNAT family acetyltransferase 80545 12329984 SAA6008_00074 Staphylococcus aureus subsp. aureus str. JKD6008 GNAT family acetyltransferase YP_005743469.1 80150 D 546342 CDS YP_005743470.1 384860750 12329985 complement(80652..81638) 1 NC_017341.1 tRNA dihydrouridine synthase 81638 dus 12329985 dus Staphylococcus aureus subsp. aureus str. JKD6008 tRNA dihydrouridine synthase YP_005743470.1 80652 R 546342 CDS YP_005743471.1 384860751 12329986 82198..82494 1 NC_017341.1 TfoX N-terminal domain-containing protein 82494 tFox 12329986 tFox Staphylococcus aureus subsp. aureus str. JKD6008 TfoX N-terminal domain-containing protein YP_005743471.1 82198 D 546342 CDS YP_005743472.1 384860752 12329987 82702..83304 1 NC_017341.1 hypothetical protein 83304 12329987 SAA6008_00077 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743472.1 82702 D 546342 CDS YP_005743473.1 384860753 12329988 83572..86724 1 NC_017341.1 hypothetical protein 86724 12329988 SAA6008_00078 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743473.1 83572 D 546342 CDS YP_005743474.1 384860754 12329989 86807..87289 1 NC_017341.1 hypothetical protein 87289 12329989 SAA6008_00079 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743474.1 86807 D 546342 CDS YP_005743475.1 384860755 12329990 87494..88480 1 NC_017341.1 phosphatidylinositol-specific phospholipase C 88480 plc 12329990 plc Staphylococcus aureus subsp. aureus str. JKD6008 phosphatidylinositol-specific phospholipase C YP_005743475.1 87494 D 546342 CDS YP_005743476.1 384860756 12329991 88701..89471 1 NC_017341.1 staphylococcal tandem lipoprotein 89471 12329991 SAA6008_00081 Staphylococcus aureus subsp. aureus str. JKD6008 staphylococcal tandem lipoprotein YP_005743476.1 88701 D 546342 CDS YP_005743477.1 384860757 12329992 89565..91802 1 NC_017341.1 PFAM: helix-turn-helix- domain containing protein AraC type KEGG: sav:SAV0101 hypothetical protein; bifunctional AraC family transcriptional regulator/xylan 1,4-beta-xylosidase 91802 12329992 SAA6008_00082 Staphylococcus aureus subsp. aureus str. JKD6008 bifunctional AraC family transcriptional regulator/xylan 1,4-beta-xylosidase YP_005743477.1 89565 D 546342 CDS YP_005743478.1 384860758 12329993 91944..93131 1 NC_017341.1 peptidase, M20/M25/M40 family 93131 12329993 SAA6008_00083 Staphylococcus aureus subsp. aureus str. JKD6008 peptidase, M20/M25/M40 family YP_005743478.1 91944 D 546342 CDS YP_005743479.1 384860759 12329994 93133..94521 1 NC_017341.1 major facilitator superfamily transporter 94521 12329994 SAA6008_00084 Staphylococcus aureus subsp. aureus str. JKD6008 major facilitator superfamily transporter YP_005743479.1 93133 D 546342 CDS YP_005743480.1 384860760 12329995 complement(95007..96674) 1 NC_017341.1 Na+/phosphate symporter 96674 nptA 12329995 nptA Staphylococcus aureus subsp. aureus str. JKD6008 Na+/phosphate symporter YP_005743480.1 95007 R 546342 CDS YP_005743481.1 384860761 12329996 complement(96993..98768) 1 NC_017341.1 myosin-cross-reactive antigen 98768 12329996 SAA6008_00086 Staphylococcus aureus subsp. aureus str. JKD6008 myosin-cross-reactive antigen YP_005743481.1 96993 R 546342 CDS YP_005743482.1 384860762 12329997 99119..99592 1 NC_017341.1 hypothetical protein 99592 12329997 SAA6008_00087 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743482.1 99119 D 546342 CDS YP_005743483.1 384860763 12329998 99854..101446 1 NC_017341.1 TIGRFAM: L-lactate transport PFAM: L-lactate permease KEGG: sab:SAB0049 L-lactate permease; L-lactate permease 101446 12329998 SAA6008_00088 Staphylococcus aureus subsp. aureus str. JKD6008 L-lactate permease YP_005743483.1 99854 D 546342 CDS YP_005743484.1 384860764 12329999 complement(101775..103091) 1 NC_017341.1 immunoglobulin G binding protein A 103091 12329999 SAA6008_00089 Staphylococcus aureus subsp. aureus str. JKD6008 immunoglobulin G binding protein A YP_005743484.1 101775 R 546342 CDS YP_005743485.1 384860765 12330000 complement(103475..104227) 1 NC_017341.1 TIGRFAM: staphylococcal accessory regulator family PFAM: regulatory protein, MarR; staphylococcal accessory regulator A, SarH2 104227 sarH2 12330000 sarH2 Staphylococcus aureus subsp. aureus str. JKD6008 staphylococcal accessory regulator A, SarH2 YP_005743485.1 103475 R 546342 CDS YP_005743486.1 384860766 12330001 complement(104596..105594) 1 NC_017341.1 iron-dicitrate transporter subunit FecD 105594 fecD 12330001 fecD Staphylococcus aureus subsp. aureus str. JKD6008 iron-dicitrate transporter subunit FecD YP_005743486.1 104596 R 546342 CDS YP_005743487.1 384860767 12330002 complement(105591..106586) 1 NC_017341.1 iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane protein 106586 sirB 12330002 sirB Staphylococcus aureus subsp. aureus str. JKD6008 iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane protein YP_005743487.1 105591 R 546342 CDS YP_005743488.1 384860768 12330003 complement(106602..107594) 1 NC_017341.1 iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein 107594 sirA 12330003 sirA Staphylococcus aureus subsp. aureus str. JKD6008 iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein YP_005743488.1 106602 R 546342 CDS YP_005743489.1 384860769 12330004 107825..108805 1 NC_017341.1 identified by match to protein family HMM PF00291; cystathionine beta-synthase family protein 108805 12330004 SAA6008_00094 Staphylococcus aureus subsp. aureus str. JKD6008 cystathionine beta-synthase family protein YP_005743489.1 107825 D 546342 CDS YP_005743490.1 384860770 12330005 108802..109812 1 NC_017341.1 ornithine cyclodeaminase 109812 12330005 SAA6008_00095 Staphylococcus aureus subsp. aureus str. JKD6008 ornithine cyclodeaminase YP_005743490.1 108802 D 546342 CDS YP_005743491.1 384860771 12330006 109833..111587 1 NC_017341.1 IucA/IucC family siderophore biosynthesis protein 111587 sbnC 12330006 sbnC Staphylococcus aureus subsp. aureus str. JKD6008 IucA/IucC family siderophore biosynthesis protein YP_005743491.1 109833 D 546342 CDS YP_005743492.1 384860772 12330007 111580..112836 1 NC_017341.1 MFS family major facilitator transporter 112836 sbnD 12330007 sbnD Staphylococcus aureus subsp. aureus str. JKD6008 MFS family major facilitator transporter YP_005743492.1 111580 D 546342 CDS YP_005743493.1 384860773 12330008 112826..114562 1 NC_017341.1 siderophore biosynthesis protein, IucA/IucC family 114562 sbnE 12330008 sbnE Staphylococcus aureus subsp. aureus str. JKD6008 siderophore biosynthesis protein, IucA/IucC family YP_005743493.1 112826 D 546342 CDS YP_005743494.1 384860774 12330009 114591..116321 1 NC_017341.1 PFAM: IucA/IucC family protein KEGG: sav:SAV0121 similar to siderophore biosynthesis protein; siderophore synthetase 116321 12330009 SAA6008_00099 Staphylococcus aureus subsp. aureus str. JKD6008 siderophore synthetase YP_005743494.1 114591 D 546342 CDS YP_005743495.1 384860775 12330010 116377..117072 1 NC_017341.1 aldolase 117072 12330010 SAA6008_00100 Staphylococcus aureus subsp. aureus str. JKD6008 aldolase YP_005743495.1 116377 D 546342 CDS YP_005743496.1 384860776 12330011 117072..118274 1 NC_017341.1 pyridoxal-dependent decarboxylase 118274 sbnH 12330011 sbnH Staphylococcus aureus subsp. aureus str. JKD6008 pyridoxal-dependent decarboxylase YP_005743496.1 117072 D 546342 CDS YP_005743497.1 384860777 12330012 118278..119042 1 NC_017341.1 siderophore staphylobactin biosynthesis protein SbnI 119042 sbnl 12330012 sbnl Staphylococcus aureus subsp. aureus str. JKD6008 siderophore staphylobactin biosynthesis protein SbnI YP_005743497.1 118278 D 546342 CDS YP_005743498.1 384860778 12330013 119238..119864 1 NC_017341.1 hypothetical protein 119864 12330013 SAA6008_00104 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743498.1 119238 D 546342 CDS YP_005743499.1 384860779 12330014 120075..120851 1 NC_017341.1 putative short chain dehydrogenase 120851 butA 12330014 butA Staphylococcus aureus subsp. aureus str. JKD6008 putative short chain dehydrogenase YP_005743499.1 120075 D 546342 CDS YP_005743500.1 384860780 12330015 121186..122166 1 NC_017341.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain KEGG: sab:SAB0067 probable UDP-glucose 4-epimerase; NAD-dependent epimerase/dehydratase family protein 122166 12330015 SAA6008_00106 Staphylococcus aureus subsp. aureus str. JKD6008 NAD-dependent epimerase/dehydratase family protein YP_005743500.1 121186 D 546342 CDS YP_005743501.1 384860781 12330016 122129..122818 1 NC_017341.1 sugar transferase 122818 12330016 SAA6008_00107 Staphylococcus aureus subsp. aureus str. JKD6008 sugar transferase YP_005743501.1 122129 D 546342 CDS YP_005743502.1 384860782 12330017 123028..124194 1 NC_017341.1 PFAM: glycosyl transferase group 1 KEGG: sav:SAV0130 hypothetical protein; glycoside hydrolase family protein 124194 12330017 SAA6008_00108 Staphylococcus aureus subsp. aureus str. JKD6008 glycoside hydrolase family protein YP_005743502.1 123028 D 546342 CDS YP_005743503.1 384860783 12330018 124175..125413 1 NC_017341.1 PFAM: O-antigen ligase KEGG: sav:SAV0131 hypothetical protein; hypothetical protein 125413 12330018 SAA6008_00109 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743503.1 124175 D 546342 CDS YP_005743504.1 384860784 12330019 125403..126833 1 NC_017341.1 MOP superfamily multidrug/oligosaccharidyl-lipid/polysaccharide flippase transporter 126833 12330019 SAA6008_00110 Staphylococcus aureus subsp. aureus str. JKD6008 MOP superfamily multidrug/oligosaccharidyl-lipid/polysaccharide flippase transporter YP_005743504.1 125403 D 546342 CDS YP_005743505.1 384860785 12330020 127101..127700 1 NC_017341.1 Superoxide dismutase (Mn/Fe family) 127700 sodM 12330020 sodM Staphylococcus aureus subsp. aureus str. JKD6008 Superoxide dismutase (Mn/Fe family) YP_005743505.1 127101 D 546342 CDS YP_005743506.1 384860786 12330021 128069..128734 1 NC_017341.1 cell wall surface anchor family protein 128734 sasD 12330021 sasD Staphylococcus aureus subsp. aureus str. JKD6008 cell wall surface anchor family protein YP_005743506.1 128069 D 546342 CDS YP_005743507.1 384860787 12330022 complement(128836..129591) 1 NC_017341.1 GntR family transcriptional regulator 129591 12330022 SAA6008_00113 Staphylococcus aureus subsp. aureus str. JKD6008 GntR family transcriptional regulator YP_005743507.1 128836 R 546342 CDS YP_005743508.1 384860788 12330023 129827..130534 1 NC_017341.1 putative purine nucleoside phosphorylase 130534 pnp 12330023 pnp Staphylococcus aureus subsp. aureus str. JKD6008 putative purine nucleoside phosphorylase YP_005743508.1 129827 D 546342 CDS YP_005743509.1 384860789 12330024 130541..131893 1 NC_017341.1 putative tetracycline resistance protein 131893 12330024 SAA6008_00115 Staphylococcus aureus subsp. aureus str. JKD6008 putative tetracycline resistance protein YP_005743509.1 130541 D 546342 CDS YP_005743510.1 384860790 12330025 131974..132636 1 NC_017341.1 deoxyribose-phosphate aldolase 1 132636 dra 12330025 dra Staphylococcus aureus subsp. aureus str. JKD6008 deoxyribose-phosphate aldolase 1 YP_005743510.1 131974 D 546342 CDS YP_005743511.1 384860791 12330026 132664..133842 1 NC_017341.1 putative phosphopentomutase 133842 drm 12330026 drm Staphylococcus aureus subsp. aureus str. JKD6008 putative phosphopentomutase YP_005743511.1 132664 D 546342 CDS YP_005743512.1 384860792 12330027 complement(133973..134788) 1 NC_017341.1 TIGRFAM: phosphonate ABC transporter, inner membrane subunit PFAM: binding-protein-dependent transport systems inner membrane component KEGG: sao:SAOUHSC_00102 phosphonates ABC transporter, permease protein CC0363, putative; ABC superfamily ATP binding cassette transporter, membrane protein 134788 12330027 SAA6008_00118 Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, membrane protein YP_005743512.1 133973 R 546342 CDS YP_005743513.1 384860793 12330028 complement(134785..135585) 1 NC_017341.1 TIGRFAM: phosphonate ABC transporter, inner membrane subunit PFAM: binding-protein-dependent transport systems inner membrane component; ABC superfamily ATP binding cassette transporter, membrane protein 135585 12330028 SAA6008_00119 Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, membrane protein YP_005743513.1 134785 R 546342 CDS YP_005743514.1 384860794 12330029 complement(135587..136360) 1 NC_017341.1 phosphonate ABC transporter ATP-binding protein 136360 phnC 12330029 phnC Staphylococcus aureus subsp. aureus str. JKD6008 phosphonate ABC transporter ATP-binding protein YP_005743514.1 135587 R 546342 CDS YP_005743515.1 384860795 12330030 complement(136574..137530) 1 NC_017341.1 phosphate/phosphonate ABC transporter periplasmic protein 137530 phnD 12330030 phnD Staphylococcus aureus subsp. aureus str. JKD6008 phosphate/phosphonate ABC transporter periplasmic protein YP_005743515.1 136574 R 546342 CDS YP_005743516.1 384860796 12330031 137759..139303 1 NC_017341.1 putative ABC-type transporter 139303 12330031 SAA6008_00122 Staphylococcus aureus subsp. aureus str. JKD6008 putative ABC-type transporter YP_005743516.1 137759 D 546342 CDS YP_005743517.1 384860797 12330032 139354..140889 1 NC_017341.1 5'-nucleotidase 140889 ushA 12330032 ushA Staphylococcus aureus subsp. aureus str. JKD6008 5'-nucleotidase YP_005743517.1 139354 D 546342 CDS YP_005743518.1 384860798 12330033 141046..141813 1 NC_017341.1 hypothetical protein 141813 12330033 SAA6008_00124 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743518.1 141046 D 546342 CDS YP_005743519.1 384860799 12330034 141819..142994 1 NC_017341.1 Contains Zn binding and helix-turn-helix domains; hypothetical protein 142994 12330034 SAA6008_00125 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743519.1 141819 D 546342 CDS YP_005743520.1 384860800 12330035 143380..145989 1 NC_017341.1 bifunctional acetaldehyde-CoA/alcohol dehydrogenase 145989 adhE 12330035 adhE Staphylococcus aureus subsp. aureus str. JKD6008 bifunctional acetaldehyde-CoA/alcohol dehydrogenase YP_005743520.1 143380 D 546342 CDS YP_005743521.1 384860801 12330036 146334..147002 1 NC_017341.1 capsular polysaccharide biosynthesis protein Cap5A 147002 cap5A 12330036 cap5A Staphylococcus aureus subsp. aureus str. JKD6008 capsular polysaccharide biosynthesis protein Cap5A YP_005743521.1 146334 D 546342 CDS YP_005743522.1 384860802 12330037 147018..147704 1 NC_017341.1 capsular polysaccharide biosynthesis protein Cap5B 147704 cap5B 12330037 cap5B Staphylococcus aureus subsp. aureus str. JKD6008 capsular polysaccharide biosynthesis protein Cap5B YP_005743522.1 147018 D 546342 CDS YP_005743523.1 384860803 12330038 147707..148471 1 NC_017341.1 identified by match to protein family HMM PF02811; capsular polysaccharide biosynthesis protein Cap5C 148471 cap5C 12330038 cap5C Staphylococcus aureus subsp. aureus str. JKD6008 capsular polysaccharide biosynthesis protein Cap5C YP_005743523.1 147707 D 546342 CDS YP_005743524.1 384860804 12330039 148551..150314 1 NC_017341.1 capsular polysaccharide biosynthesis protein Cap5D 150314 cap5D 12330039 cap5D Staphylococcus aureus subsp. aureus str. JKD6008 capsular polysaccharide biosynthesis protein Cap5D YP_005743524.1 148551 D 546342 CDS YP_005743525.1 384860805 12330040 150304..151332 1 NC_017341.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility domain; Polysaccharide biosynthesis domain protein KEGG: sas:SAS0128 capsular polysaccharide synthesis enzyme; capsular polysaccharide biosynthesis protein Cap5E 151332 cap5E 12330040 cap5E Staphylococcus aureus subsp. aureus str. JKD6008 capsular polysaccharide biosynthesis protein Cap5E YP_005743525.1 150304 D 546342 CDS YP_005743526.1 384860806 12330041 151339..152454 1 NC_017341.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain KEGG: sav:SAV0154 capsular polysaccharide synthesis enzyme Cap5F; capsular polysaccharide biosynthesis protein Cap5F 152454 cap5F 12330041 cap5F Staphylococcus aureus subsp. aureus str. JKD6008 capsular polysaccharide biosynthesis protein Cap5F YP_005743526.1 151339 D 546342 CDS YP_005743527.1 384860807 12330042 152458..153582 1 NC_017341.1 identified by match to protein family HMM PF02350; match to protein family HMM TIGR00236; capsular polysaccharide biosynthesis protein Cap5G 153582 cap5G 12330042 cap5G Staphylococcus aureus subsp. aureus str. JKD6008 capsular polysaccharide biosynthesis protein Cap5G YP_005743527.1 152458 D 546342 CDS YP_005743528.1 384860808 12330043 153585..154664 1 NC_017341.1 capsular polysaccharide synthesis enzyme Cap8H 154664 cap8H 12330043 cap8H Staphylococcus aureus subsp. aureus str. JKD6008 capsular polysaccharide synthesis enzyme Cap8H YP_005743528.1 153585 D 546342 CDS YP_005743529.1 384860809 12330044 154717..156051 1 NC_017341.1 capsular polysaccharide synthesis enzyme Cap8I 156051 cap8I 12330044 cap8I Staphylococcus aureus subsp. aureus str. JKD6008 capsular polysaccharide synthesis enzyme Cap8I YP_005743529.1 154717 D 546342 CDS YP_005743530.1 384860810 12330045 156048..156605 1 NC_017341.1 capsular polysaccharide synthesis enzyme Cap8J 156605 cap8J 12330045 cap8J Staphylococcus aureus subsp. aureus str. JKD6008 capsular polysaccharide synthesis enzyme Cap8J YP_005743530.1 156048 D 546342 CDS YP_005743531.1 384860811 12330046 156614..157852 1 NC_017341.1 capsular polysaccharide synthesis enzyme Cap8K 157852 cap8K 12330046 cap8K Staphylococcus aureus subsp. aureus str. JKD6008 capsular polysaccharide synthesis enzyme Cap8K YP_005743531.1 156614 D 546342 CDS YP_005743532.1 384860812 12330047 157886..159091 1 NC_017341.1 capsular polysaccharide synthesis enzyme Cap5L 159091 cap5L 12330047 cap5L Staphylococcus aureus subsp. aureus str. JKD6008 capsular polysaccharide synthesis enzyme Cap5L YP_005743532.1 157886 D 546342 CDS YP_005743533.1 384860813 12330048 159102..159659 1 NC_017341.1 PFAM: sugar transferase KEGG: sao:SAOUHSC_00126 capsular polysaccharide biosynthesis protein Cap8M; capsular polysaccharide biosynthesis galactosyltransferase Cap5M 159659 cap5M 12330048 cap5M Staphylococcus aureus subsp. aureus str. JKD6008 capsular polysaccharide biosynthesis galactosyltransferase Cap5M YP_005743533.1 159102 D 546342 CDS YP_005743534.1 384860814 12330049 159659..160546 1 NC_017341.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; capsular polysaccharide biosynthesis protein Cap5N 160546 cap5N 12330049 cap5N Staphylococcus aureus subsp. aureus str. JKD6008 capsular polysaccharide biosynthesis protein Cap5N YP_005743534.1 159659 D 546342 CDS YP_005743535.1 384860815 12330050 160600..161862 1 NC_017341.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase-like; capsular polysaccharide biosynthesis protein Cap5O 161862 cap5O 12330050 cap5O Staphylococcus aureus subsp. aureus str. JKD6008 capsular polysaccharide biosynthesis protein Cap5O YP_005743535.1 160600 D 546342 CDS YP_005743536.1 384860816 12330051 161939..163084 1 NC_017341.1 PFAM: UDP-N-acetylglucosamine 2-epimerase KEGG: sav:SAV0164 capsular polysaccharide synthesis enzyme Cap5P; capsular polysaccharide biosynthesis protein Cap5P 163084 cap5P 12330051 cap5P Staphylococcus aureus subsp. aureus str. JKD6008 capsular polysaccharide biosynthesis protein Cap5P YP_005743536.1 161939 D 546342 CDS YP_005743537.1 384860817 12330052 complement(163149..163469) 1 NC_017341.1 heme-degrading monooxygenase IsdI 163469 isdI 12330052 isdI Staphylococcus aureus subsp. aureus str. JKD6008 heme-degrading monooxygenase IsdI YP_005743537.1 163149 R 546342 CDS YP_005743538.1 384860818 12330053 complement(163482..163865) 1 NC_017341.1 hypothetical protein 163865 12330053 SAA6008_00144 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743538.1 163482 R 546342 CDS YP_005743539.1 384860819 12330054 164292..165779 1 NC_017341.1 PFAM: aldehyde dehydrogenase KEGG: sam:MW0142 aldehyde dehydrogenase homologue; putative aldehyde dehydrogenase 165779 12330054 SAA6008_00145 Staphylococcus aureus subsp. aureus str. JKD6008 putative aldehyde dehydrogenase YP_005743539.1 164292 D 546342 CDS YP_005743540.1 384860820 12330055 166426..167385 1 NC_017341.1 putative cation efflux system protein 167385 12330055 SAA6008_00146 Staphylococcus aureus subsp. aureus str. JKD6008 putative cation efflux system protein YP_005743540.1 166426 D 546342 CDS YP_005743541.1 384860821 12330056 complement(167447..167650) 1 NC_017341.1 hypothetical protein 167650 12330056 SAA6008_00147 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743541.1 167447 R 546342 CDS YP_005743542.1 384860822 12330057 167830..168342 1 NC_017341.1 hypothetical protein 168342 12330057 SAA6008_00148 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743542.1 167830 D 546342 CDS YP_005743543.1 384860823 12330058 168684..169424 1 NC_017341.1 ABC-type nitrate/sulfonate/bicarbonate transporter, TauB 169424 tauB 12330058 tauB Staphylococcus aureus subsp. aureus str. JKD6008 ABC-type nitrate/sulfonate/bicarbonate transporter, TauB YP_005743543.1 168684 D 546342 CDS YP_005743544.1 384860824 12330059 169438..170412 1 NC_017341.1 ABC-type nitrate/sulfonate/bicarbonate transporter, TauA 170412 tauA 12330059 tauA Staphylococcus aureus subsp. aureus str. JKD6008 ABC-type nitrate/sulfonate/bicarbonate transporter, TauA YP_005743544.1 169438 D 546342 CDS YP_005743545.1 384860825 12330060 170409..171170 1 NC_017341.1 binding-protein-dependent transport system inner membrane protein 171170 12330060 SAA6008_00151 Staphylococcus aureus subsp. aureus str. JKD6008 binding-protein-dependent transport system inner membrane protein YP_005743545.1 170409 D 546342 CDS YP_005743546.1 384860826 12330061 171183..172214 1 NC_017341.1 similar to acyl-CoA dehydrogenase family protein; short chain acyl-CoA dehydrogenase 172214 12330061 SAA6008_00152 Staphylococcus aureus subsp. aureus str. JKD6008 short chain acyl-CoA dehydrogenase YP_005743546.1 171183 D 546342 CDS YP_005743547.1 384860827 12330062 172527..172787 1 NC_017341.1 hypothetical protein 172787 12330062 SAA6008_00153 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743547.1 172527 D 546342 CDS YP_005743548.1 384860828 12330063 172961..173986 1 NC_017341.1 formate dehydrogenase 173986 12330063 SAA6008_00154 Staphylococcus aureus subsp. aureus str. JKD6008 formate dehydrogenase YP_005743548.1 172961 D 546342 CDS YP_005743549.1 384860829 12330065 176051..183244 1 NC_017341.1 aureusimine non-ribosomal peptide synthetase 183244 ausA 12330065 ausA Staphylococcus aureus subsp. aureus str. JKD6008 aureusimine non-ribosomal peptide synthetase YP_005743549.1 176051 D 546342 CDS YP_005743550.1 384860830 12330066 183257..183901 1 NC_017341.1 4'-phosphopantetheinyl transferase-like protein 183901 12330066 SAA6008_00158 Staphylococcus aureus subsp. aureus str. JKD6008 4'-phosphopantetheinyl transferase-like protein YP_005743550.1 183257 D 546342 CDS YP_005743551.1 384860831 12330067 complement(184230..184724) 1 NC_017341.1 hypothetical protein 184724 12330067 SAA6008_00159 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743551.1 184230 R 546342 CDS YP_005743552.1 384860832 12330068 complement(184994..185764) 1 NC_017341.1 acetylglutamate kinase 185764 argB 12330068 argB Staphylococcus aureus subsp. aureus str. JKD6008 acetylglutamate kinase YP_005743552.1 184994 R 546342 CDS YP_005743553.1 384860833 12330069 complement(185780..187021) 1 NC_017341.1 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 187021 argJ 12330069 argJ Staphylococcus aureus subsp. aureus str. JKD6008 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase YP_005743553.1 185780 R 546342 CDS YP_005743554.1 384860834 12330070 complement(187033..188064) 1 NC_017341.1 putative N-acetyl-gamma-glutamyl-phosphate reductase 188064 argC 12330070 argC Staphylococcus aureus subsp. aureus str. JKD6008 putative N-acetyl-gamma-glutamyl-phosphate reductase YP_005743554.1 187033 R 546342 CDS YP_005743555.1 384860835 12330071 complement(188103..189287) 1 NC_017341.1 putative ornithine aminotransferase precursor 189287 rocD1 12330071 rocD1 Staphylococcus aureus subsp. aureus str. JKD6008 putative ornithine aminotransferase precursor YP_005743555.1 188103 R 546342 CDS YP_005743556.1 384860836 12330072 complement(189540..190895) 1 NC_017341.1 putative branched-chain amino acid transport system carrier protein 190895 brnQ1 12330072 brnQ1 Staphylococcus aureus subsp. aureus str. JKD6008 putative branched-chain amino acid transport system carrier protein YP_005743556.1 189540 R 546342 CDS YP_005743557.1 384860837 12330073 complement(191173..191670) 1 NC_017341.1 PFAM: isochorismatase hydrolase KEGG: sas:SAS0162 putative isochorismatase; isochorismatase family protein 191670 12330073 SAA6008_00165 Staphylococcus aureus subsp. aureus str. JKD6008 isochorismatase family protein YP_005743557.1 191173 R 546342 CDS YP_005743558.1 384860838 12330074 complement(191797..193437) 1 NC_017341.1 thiamine pyrophosphate TPP binding domain-containing protein 193437 ipdC 12330074 ipdC Staphylococcus aureus subsp. aureus str. JKD6008 thiamine pyrophosphate TPP binding domain-containing protein YP_005743558.1 191797 R 546342 CDS YP_005743559.1 384860839 12330075 complement(193709..195754) 1 NC_017341.1 PTS system, glucose-specific IICBA component 195754 12330075 SAA6008_00168 Staphylococcus aureus subsp. aureus str. JKD6008 PTS system, glucose-specific IICBA component YP_005743559.1 193709 R 546342 CDS YP_005743560.1 384860840 12330076 196339..197394 1 NC_017341.1 hypothetical protein 197394 12330076 SAA6008_00169 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743560.1 196339 D 546342 CDS YP_005743561.1 384860841 12330077 197394..198290 1 NC_017341.1 N-acetylmuramic acid 6-phosphate etherase 198290 murQ 12330077 murQ Staphylococcus aureus subsp. aureus str. JKD6008 N-acetylmuramic acid 6-phosphate etherase YP_005743561.1 197394 D 546342 CDS YP_005743562.1 384860842 12330078 198302..199756 1 NC_017341.1 similar to PTS system sucrose-specific IIBC component; N-acetylmuramic acid phosphotransfer permease 199756 murP 12330078 murP Staphylococcus aureus subsp. aureus str. JKD6008 N-acetylmuramic acid phosphotransfer permease YP_005743562.1 198302 D 546342 CDS YP_005743563.1 384860843 12330079 199759..200634 1 NC_017341.1 identified by match to protein family HMM PF01380; match to protein family HMM PF01418; phosphosugar-binding transcriptional regulator, RpiR family 200634 12330079 SAA6008_00172 Staphylococcus aureus subsp. aureus str. JKD6008 phosphosugar-binding transcriptional regulator, RpiR family YP_005743563.1 199759 D 546342 CDS YP_005743564.1 384860844 12330080 201323..204112 1 NC_017341.1 type-I restriction-modification system restriction endonuclease subunit 204112 hsdR 12330080 hsdR Staphylococcus aureus subsp. aureus str. JKD6008 type-I restriction-modification system restriction endonuclease subunit YP_005743564.1 201323 D 546342 CDS YP_005743565.1 384860845 12330081 204312..205175 1 NC_017341.1 hypothetical protein 205175 12330081 SAA6008_00174 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743565.1 204312 D 546342 CDS YP_005743566.1 384860846 12330082 complement(205380..206972) 1 NC_017341.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein SMART: AAA ATPase KEGG: sav:SAV0205 oligopeptide transport ATP-binding protein; ABC transporter ATP-binding protein 206972 12330082 SAA6008_00175 Staphylococcus aureus subsp. aureus str. JKD6008 ABC transporter ATP-binding protein YP_005743566.1 205380 R 546342 CDS YP_005743567.1 384860847 12330083 207145..208407 1 NC_017341.1 putative transport system permease 208407 12330083 SAA6008_00176 Staphylococcus aureus subsp. aureus str. JKD6008 putative transport system permease YP_005743567.1 207145 D 546342 CDS YP_005743568.1 384860848 12330084 208413..209576 1 NC_017341.1 oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein 209576 12330084 SAA6008_00177 Staphylococcus aureus subsp. aureus str. JKD6008 oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein YP_005743568.1 208413 D 546342 CDS YP_005743569.1 384860849 12330085 209593..211368 1 NC_017341.1 ABC-type dipeptide transport system periplasmic component-like protein 211368 rlp 12330085 rlp Staphylococcus aureus subsp. aureus str. JKD6008 ABC-type dipeptide transport system periplasmic component-like protein YP_005743569.1 209593 D 546342 CDS YP_005743570.1 384860850 12330086 211406..213412 1 NC_017341.1 TIGRFAM: gamma-glutamyltransferase PFAM: gamma-glutamyltranspeptidase KEGG: sav:SAV0209 gamma-glutamyltranspeptidase; gamma-glutamyltranspeptidase 213412 ggt 12330086 ggt Staphylococcus aureus subsp. aureus str. JKD6008 gamma-glutamyltranspeptidase YP_005743570.1 211406 D 546342 CDS YP_005743571.1 384860851 12330087 complement(213950..214576) 1 NC_017341.1 PFAM: NAD(P)H dehydrogenase (quinone) KEGG: sao:SAOUHSC_00173 acyl carrier phosphodiesterase; FMN-dependent NADH-azoreductase, AzoR 214576 azoR 12330087 azoR Staphylococcus aureus subsp. aureus str. JKD6008 FMN-dependent NADH-azoreductase, AzoR YP_005743571.1 213950 R 546342 CDS YP_005743572.1 384860852 12330088 214785..215363 1 NC_017341.1 M23/M37 peptidase domain-containing protein 215363 12330088 SAA6008_00181 Staphylococcus aureus subsp. aureus str. JKD6008 M23/M37 peptidase domain-containing protein YP_005743572.1 214785 D 546342 CDS YP_005743573.1 384860853 12330089 215746..216843 1 NC_017341.1 maltose/maltodextrin ABC superfamily ATP binding cassette transporter, ABC protein 216843 msmX 12330089 msmX Staphylococcus aureus subsp. aureus str. JKD6008 maltose/maltodextrin ABC superfamily ATP binding cassette transporter, ABC protein YP_005743573.1 215746 D 546342 CDS YP_005743574.1 384860854 12330090 216895..218127 1 NC_017341.1 maltose/maltodextrin ABC superfamily ATP binding cassette transporter, binding protein 218127 12330090 SAA6008_00183 Staphylococcus aureus subsp. aureus str. JKD6008 maltose/maltodextrin ABC superfamily ATP binding cassette transporter, binding protein YP_005743574.1 216895 D 546342 CDS YP_005743575.1 384860855 12330091 218130..219398 1 NC_017341.1 maltose/maltodextrin ABC superfamily ATP binding cassette transporter, membrane protein 219398 12330091 SAA6008_00184 Staphylococcus aureus subsp. aureus str. JKD6008 maltose/maltodextrin ABC superfamily ATP binding cassette transporter, membrane protein YP_005743575.1 218130 D 546342 CDS YP_005743576.1 384860856 12330092 219400..220239 1 NC_017341.1 maltose/maltodextrin ABC superfamily ATP binding cassette transporter, membrane protein 220239 12330092 SAA6008_00185 Staphylococcus aureus subsp. aureus str. JKD6008 maltose/maltodextrin ABC superfamily ATP binding cassette transporter, membrane protein YP_005743576.1 219400 D 546342 CDS YP_005743577.1 384860857 12330093 220416..221492 1 NC_017341.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain KEGG: sau:SA0210 hypothetical protein; oxidoreductase 221492 12330093 SAA6008_00186 Staphylococcus aureus subsp. aureus str. JKD6008 oxidoreductase YP_005743577.1 220416 D 546342 CDS YP_005743578.1 384860858 12330094 221517..222557 1 NC_017341.1 NADH-dependent dehydrogenase 222557 mviM 12330094 mviM Staphylococcus aureus subsp. aureus str. JKD6008 NADH-dependent dehydrogenase YP_005743578.1 221517 D 546342 CDS YP_005743579.1 384860859 12330095 222612..223580 1 NC_017341.1 sugar phosphate isomerase/epimerase 223580 iolE 12330095 iolE Staphylococcus aureus subsp. aureus str. JKD6008 sugar phosphate isomerase/epimerase YP_005743579.1 222612 D 546342 CDS YP_005743580.1 384860860 12330096 complement(223939..224433) 1 NC_017341.1 isoprenylcysteine carboxyl methyltransferase 224433 12330096 SAA6008_00189 Staphylococcus aureus subsp. aureus str. JKD6008 isoprenylcysteine carboxyl methyltransferase YP_005743580.1 223939 R 546342 CDS YP_005743581.1 384860861 12330097 224666..226045 1 NC_017341.1 putative sugar phosphate transport protein 226045 uhpT 12330097 uhpT Staphylococcus aureus subsp. aureus str. JKD6008 putative sugar phosphate transport protein YP_005743581.1 224666 D 546342 CDS YP_005743582.1 384860862 12330098 complement(226404..227162) 1 NC_017341.1 DNA-binding response regulator AraC family protein 227162 12330098 SAA6008_00191 Staphylococcus aureus subsp. aureus str. JKD6008 DNA-binding response regulator AraC family protein YP_005743582.1 226404 R 546342 CDS YP_005743583.1 384860863 12330099 complement(227155..228711) 1 NC_017341.1 PFAM: histidine kinase internal region KEGG: sav:SAV0224 similar to two-component sensor histidine kinase; Two-component sensor histidine kinase 228711 12330099 SAA6008_00192 Staphylococcus aureus subsp. aureus str. JKD6008 Two-component sensor histidine kinase YP_005743583.1 227155 R 546342 CDS YP_005743584.1 384860864 12330100 complement(228708..229676) 1 NC_017341.1 iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane/binding protein 229676 12330100 SAA6008_00193 Staphylococcus aureus subsp. aureus str. JKD6008 iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane/binding protein YP_005743584.1 228708 R 546342 CDS YP_005743585.1 384860865 12330101 230264..232513 1 NC_017341.1 formate C-acetyltransferase 232513 pflB 12330101 pflB Staphylococcus aureus subsp. aureus str. JKD6008 formate C-acetyltransferase YP_005743585.1 230264 D 546342 CDS YP_005743586.1 384860866 12330102 232536..233291 1 NC_017341.1 pyruvate formate-lyase activating enzyme 233291 pflA 12330102 pflA Staphylococcus aureus subsp. aureus str. JKD6008 pyruvate formate-lyase activating enzyme YP_005743586.1 232536 D 546342 CDS YP_005743587.1 384860867 12330103 233395..233562 1 NC_017341.1 hypothetical protein 233562 12330103 SAA6008_00196 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743587.1 233395 D 546342 CDS YP_005743588.1 384860868 12330104 233562..235376 1 NC_017341.1 Membrane domain of membrane-anchored glycerophosphoryl diester phosphodiesterase 235376 glpQ1 12330104 glpQ1 Staphylococcus aureus subsp. aureus str. JKD6008 Membrane domain of membrane-anchored glycerophosphoryl diester phosphodiesterase YP_005743588.1 233562 D 546342 CDS YP_005743589.1 384860869 12330105 complement(235540..235884) 1 NC_017341.1 Staphylococcal complement inhibitor SCIN 235884 12330105 SAA6008_00198 Staphylococcus aureus subsp. aureus str. JKD6008 Staphylococcal complement inhibitor SCIN YP_005743589.1 235540 R 546342 CDS YP_005743590.1 384860870 12330106 236074..238065 1 NC_017341.1 staphylocoagulase 238065 12330106 SAA6008_00199 Staphylococcus aureus subsp. aureus str. JKD6008 staphylocoagulase YP_005743590.1 236074 D 546342 CDS YP_005743591.1 384860871 12330107 complement(238652..239836) 1 NC_017341.1 putative acyl-CoA acetyltransferase FadA 239836 fadA 12330107 fadA Staphylococcus aureus subsp. aureus str. JKD6008 putative acyl-CoA acetyltransferase FadA YP_005743591.1 238652 R 546342 CDS YP_005743592.1 384860872 12330108 complement(239866..242127) 1 NC_017341.1 3-hydroxyacyl-CoA dehydrogenase 242127 fadB 12330108 fadB Staphylococcus aureus subsp. aureus str. JKD6008 3-hydroxyacyl-CoA dehydrogenase YP_005743592.1 239866 R 546342 CDS YP_005743593.1 384860873 12330109 complement(242314..243570) 1 NC_017341.1 NRAMP family Mn2+/Fe2+ transporter 243570 fadD 12330109 fadD Staphylococcus aureus subsp. aureus str. JKD6008 NRAMP family Mn2+/Fe2+ transporter YP_005743593.1 242314 R 546342 CDS YP_005743594.1 384860874 12330110 complement(243637..245142) 1 NC_017341.1 PFAM: AMP-dependent synthetase and ligase KEGG: sav:SAV0234 long-chain fatty-acid-CoA ligase; long-chain-fatty-acid--CoA ligase 245142 12330110 SAA6008_00203 Staphylococcus aureus subsp. aureus str. JKD6008 long-chain-fatty-acid--CoA ligase YP_005743594.1 243637 R 546342 CDS YP_005743595.1 384860875 12330111 complement(245168..246730) 1 NC_017341.1 putative acetyl-CoA/acetoacetyl-CoA transferase 246730 fadX 12330111 fadX Staphylococcus aureus subsp. aureus str. JKD6008 putative acetyl-CoA/acetoacetyl-CoA transferase YP_005743595.1 245168 R 546342 CDS YP_005743596.1 384860876 12330112 247104..247775 1 NC_017341.1 glutamine amidotransferase 247775 12330112 SAA6008_00205 Staphylococcus aureus subsp. aureus str. JKD6008 glutamine amidotransferase YP_005743596.1 247104 D 546342 CDS YP_005743597.1 384860877 12330113 247912..249141 1 NC_017341.1 hypothetical protein 249141 12330113 SAA6008_00206 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743597.1 247912 D 546342 CDS YP_005743598.1 384860878 12330114 complement(249452..250927) 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, binding protein 250927 12330114 SAA6008_00207 Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, binding protein YP_005743598.1 249452 R 546342 CDS YP_005743599.1 384860879 12330115 complement(251125..251481) 1 NC_017341.1 hypothetical protein 251481 12330115 SAA6008_00208 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743599.1 251125 R 546342 CDS YP_005743600.1 384860880 12330116 complement(251638..251811) 1 NC_017341.1 hypothetical protein 251811 12330116 SAA6008_00209 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743600.1 251638 R 546342 CDS YP_005743601.1 384860881 12330117 complement(251836..252981) 1 NC_017341.1 nitric oxide dioxygenase 252981 12330117 SAA6008_00210 Staphylococcus aureus subsp. aureus str. JKD6008 nitric oxide dioxygenase YP_005743601.1 251836 R 546342 CDS YP_005743602.1 384860882 12330118 253554..254507 1 NC_017341.1 L-lactate dehydrogenase 254507 ldh 12330118 ldh Staphylococcus aureus subsp. aureus str. JKD6008 L-lactate dehydrogenase YP_005743602.1 253554 D 546342 CDS YP_005743603.1 384860883 12330119 complement(254676..254801) 1 NC_017341.1 hypothetical protein 254801 12330119 SAA6008_00212 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743603.1 254676 R 546342 CDS YP_005743604.1 384860884 12330121 256717..257652 1 NC_017341.1 inosine/uridine-preferring nucleoside hydrolase 257652 rihA 12330121 rihA Staphylococcus aureus subsp. aureus str. JKD6008 inosine/uridine-preferring nucleoside hydrolase YP_005743604.1 256717 D 546342 CDS YP_005743605.1 384860885 12330122 257721..257834 1 NC_017341.1 hypothetical protein 257834 12330122 SAA6008_00216 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743605.1 257721 D 546342 CDS YP_005743606.1 384860886 12330123 257990..260086 1 NC_017341.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; M trans-acting positive regulator; PRD domain protein; Helix-turn-helix type 11 domain protein KEGG: sav:SAV0244 similar to transcription antiterminator (BglG family) homolog; transcriptional antiterminator 260086 12330123 SAA6008_00217 Staphylococcus aureus subsp. aureus str. JKD6008 transcriptional antiterminator YP_005743606.1 257990 D 546342 CDS YP_005743607.1 384860887 12330124 260086..260538 1 NC_017341.1 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 260538 12330124 SAA6008_00218 Staphylococcus aureus subsp. aureus str. JKD6008 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 YP_005743607.1 260086 D 546342 CDS YP_005743608.1 384860888 12330125 260561..260839 1 NC_017341.1 phosphotransferase system galactitol-specific enzyme II, B component 260839 12330125 SAA6008_00219 Staphylococcus aureus subsp. aureus str. JKD6008 phosphotransferase system galactitol-specific enzyme II, B component YP_005743608.1 260561 D 546342 CDS YP_005743609.1 384860889 12330126 261066..262325 1 NC_017341.1 PTS system galactitol-specific IIC component 262325 12330126 SAA6008_00220 Staphylococcus aureus subsp. aureus str. JKD6008 PTS system galactitol-specific IIC component YP_005743609.1 261066 D 546342 CDS YP_005743610.1 384860890 12330127 262343..263398 1 NC_017341.1 zinc-binding alcohol dehydrogenase 263398 12330127 SAA6008_00221 Staphylococcus aureus subsp. aureus str. JKD6008 zinc-binding alcohol dehydrogenase YP_005743610.1 262343 D 546342 CDS YP_005743611.1 384860891 12330128 263400..263546 1 NC_017341.1 hypothetical protein 263546 12330128 SAA6008_00222 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743611.1 263400 D 546342 CDS YP_005743612.1 384860892 12330129 263570..264613 1 NC_017341.1 oxidoreductase, zinc-binding dehydrogenase family 264613 12330129 SAA6008_00223 Staphylococcus aureus subsp. aureus str. JKD6008 oxidoreductase, zinc-binding dehydrogenase family YP_005743612.1 263570 D 546342 CDS YP_005743613.1 384860893 12330130 265129..265857 1 NC_017341.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesi; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1, IspD_1 265857 ispD_1 12330130 ispD_1 Staphylococcus aureus subsp. aureus str. JKD6008 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1, IspD_1 YP_005743613.1 265129 D 546342 CDS YP_005743614.1 384860894 12330131 265850..266875 1 NC_017341.1 ribitol-5-phosphate dehydrogenase 266875 12330131 SAA6008_00225 Staphylococcus aureus subsp. aureus str. JKD6008 ribitol-5-phosphate dehydrogenase YP_005743614.1 265850 D 546342 CDS YP_005743615.1 384860895 12330132 266897..268591 1 NC_017341.1 PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase KEGG: sav:SAV0253 similar to teichoic acid biosynthesis protein B; Putative polyribitolphosphotransferase 268591 12330132 SAA6008_00226 Staphylococcus aureus subsp. aureus str. JKD6008 Putative polyribitolphosphotransferase YP_005743615.1 266897 D 546342 CDS YP_005743616.1 384860896 12330133 complement(269237..269374) 1 NC_017341.1 Sequence at least partially present in other S. aureues genomes but not annotated as CDS; hypothetical protein 269374 12330133 SAA6008_00227 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743616.1 269237 R 546342 CDS YP_005743617.1 384860897 12330134 269561..270730 1 NC_017341.1 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase 270730 tarF 12330134 tarF Staphylococcus aureus subsp. aureus str. JKD6008 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase YP_005743617.1 269561 D 546342 CDS YP_005743618.1 384860898 12330135 271006..271722 1 NC_017341.1 involved in isoprenoid and isopentenyl-PP biosynthesis; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2, IspD_2 271722 ispD_2 12330135 ispD_2 Staphylococcus aureus subsp. aureus str. JKD6008 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2, IspD_2 YP_005743618.1 271006 D 546342 CDS YP_005743619.1 384860899 12330136 271715..272740 1 NC_017341.1 ribitol-5-phosphate dehydrogenase 272740 12330136 SAA6008_00230 Staphylococcus aureus subsp. aureus str. JKD6008 ribitol-5-phosphate dehydrogenase YP_005743619.1 271715 D 546342 CDS YP_005743620.1 384860900 12330137 272762..274450 1 NC_017341.1 PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase KEGG: sav:SAV0253 similar to teichoic acid biosynthesis protein B; Putative polyribitolphosphotransferase 274450 12330137 SAA6008_00231 Staphylococcus aureus subsp. aureus str. JKD6008 Putative polyribitolphosphotransferase YP_005743620.1 272762 D 546342 CDS YP_005743621.1 384860901 12330138 274486..276207 1 NC_017341.1 glycosyl transferase family protein 276207 12330138 SAA6008_00232 Staphylococcus aureus subsp. aureus str. JKD6008 glycosyl transferase family protein YP_005743621.1 274486 D 546342 CDS YP_005743622.1 384860902 12330139 276347..277021 1 NC_017341.1 cell division and morphogenesis-related protein 277021 scdA 12330139 scdA Staphylococcus aureus subsp. aureus str. JKD6008 cell division and morphogenesis-related protein YP_005743622.1 276347 D 546342 CDS YP_005743623.1 384860903 12330140 277272..279026 1 NC_017341.1 autolysis histidine kinase LytS 279026 lytS 12330140 lytS Staphylococcus aureus subsp. aureus str. JKD6008 autolysis histidine kinase LytS YP_005743623.1 277272 D 546342 CDS YP_005743624.1 384860904 12330141 279029..279769 1 NC_017341.1 PFAM: response regulator receiver; LytTr DNA-binding region-containing protein KEGG: sao:SAOUHSC_00231 two-component response regulator, putative; two component transcriptional regulator, LytR 279769 lytR 12330141 lytR Staphylococcus aureus subsp. aureus str. JKD6008 two component transcriptional regulator, LytR YP_005743624.1 279029 D 546342 CDS YP_005743625.1 384860905 12330142 279882..280325 1 NC_017341.1 negatively regulates murein hydrolase activity; murein hydrolase regulator 280325 lrgA 12330142 lrgA Staphylococcus aureus subsp. aureus str. JKD6008 murein hydrolase regulator YP_005743625.1 279882 D 546342 CDS YP_005743626.1 384860906 12330143 280318..281019 1 NC_017341.1 antiholin-like protein LrgB 281019 lrgB 12330143 lrgB Staphylococcus aureus subsp. aureus str. JKD6008 antiholin-like protein LrgB YP_005743626.1 280318 D 546342 CDS YP_005743627.1 384860907 12330144 281360..283651 1 NC_017341.1 nitric oxide reductase large subunit 283651 norB 12330144 norB Staphylococcus aureus subsp. aureus str. JKD6008 nitric oxide reductase large subunit YP_005743627.1 281360 D 546342 CDS YP_005743628.1 384860908 12330145 complement(283877..284581) 1 NC_017341.1 UbiC transcription regulator-associated domain protein 284581 12330145 SAA6008_00239 Staphylococcus aureus subsp. aureus str. JKD6008 UbiC transcription regulator-associated domain protein YP_005743628.1 283877 R 546342 CDS YP_005743629.1 384860909 12330146 284728..285519 1 NC_017341.1 PTS system glucose-specific IIA component 285519 12330146 SAA6008_00240 Staphylococcus aureus subsp. aureus str. JKD6008 PTS system glucose-specific IIA component YP_005743629.1 284728 D 546342 CDS YP_005743630.1 384860910 12330147 285535..286971 1 NC_017341.1 glycoside hydrolase 286971 bglA 12330147 bglA Staphylococcus aureus subsp. aureus str. JKD6008 glycoside hydrolase YP_005743630.1 285535 D 546342 CDS YP_005743631.1 384860911 12330148 complement(287466..288227) 1 NC_017341.1 SAM dependent methyltransferase 288227 12330148 SAA6008_00242 Staphylococcus aureus subsp. aureus str. JKD6008 SAM dependent methyltransferase YP_005743631.1 287466 R 546342 CDS YP_005743632.1 384860912 12330149 complement(288478..289392) 1 NC_017341.1 putative ribokinase 289392 rbsK 12330149 rbsK Staphylococcus aureus subsp. aureus str. JKD6008 putative ribokinase YP_005743632.1 288478 R 546342 CDS YP_005743633.1 384860913 12330150 complement(289420..289824) 1 NC_017341.1 ribose ABC superfamily ATP binding cassette transporter, membrane protein 289824 rbsD 12330150 rbsD Staphylococcus aureus subsp. aureus str. JKD6008 ribose ABC superfamily ATP binding cassette transporter, membrane protein YP_005743633.1 289420 R 546342 CDS YP_005743634.1 384860914 12330151 complement(289839..290720) 1 NC_017341.1 DMT superfamily drug/metabolite transporter 290720 rbsU 12330151 rbsU Staphylococcus aureus subsp. aureus str. JKD6008 DMT superfamily drug/metabolite transporter YP_005743634.1 289839 R 546342 CDS YP_005743635.1 384860915 12330152 complement(290952..291950) 1 NC_017341.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator KEGG: sao:SAOUHSC_00242 hypothetical protein; sugar-binding transcriptional regulator, LacI 291950 rbsR 12330152 rbsR Staphylococcus aureus subsp. aureus str. JKD6008 sugar-binding transcriptional regulator, LacI YP_005743635.1 290952 R 546342 CDS YP_005743636.1 384860916 12330153 292329..292721 1 NC_017341.1 hypothetical protein 292721 12330153 SAA6008_00247 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743636.1 292329 D 546342 CDS YP_005743637.1 384860917 12330154 complement(292850..294226) 1 NC_017341.1 PFAM: major facilitator superfamily MFS_1 KEGG: sav:SAV0274 similar to transmembrane efflux pump protein; transmembrane efflux pump protein 294226 12330154 SAA6008_00248 Staphylococcus aureus subsp. aureus str. JKD6008 transmembrane efflux pump protein YP_005743637.1 292850 R 546342 CDS YP_005743638.1 384860918 12330155 294460..295452 1 NC_017341.1 member of linear amide C-N hydrolase / choloylglycine hydrolase family; penicillin V acylase 295452 12330155 SAA6008_00249 Staphylococcus aureus subsp. aureus str. JKD6008 penicillin V acylase YP_005743638.1 294460 D 546342 CDS YP_005743639.1 384860919 12330156 295778..296728 1 NC_017341.1 also called lysostaphin; peptidoglycan hydrolase 296728 12330156 SAA6008_00250 Staphylococcus aureus subsp. aureus str. JKD6008 peptidoglycan hydrolase YP_005743639.1 295778 D 546342 CDS YP_005743640.1 384860920 12330157 complement(296780..297439) 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, ABC protein 297439 12330157 SAA6008_00251 Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, ABC protein YP_005743640.1 296780 R 546342 CDS YP_005743641.1 384860921 12330158 complement(297453..298373) 1 NC_017341.1 hypothetical protein 298373 12330158 SAA6008_00252 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743641.1 297453 R 546342 CDS YP_005743642.1 384860922 12330159 complement(298370..299479) 1 NC_017341.1 hypothetical protein 299479 12330159 SAA6008_00253 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743642.1 298370 R 546342 CDS YP_005743643.1 384860923 12330160 complement(299604..301127) 1 NC_017341.1 hypothetical protein 301127 12330160 SAA6008_00254 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743643.1 299604 R 546342 CDS YP_005743644.1 384860924 12330161 complement(301457..302359) 1 NC_017341.1 secretory antigen precursor SsaA 302359 sssA 12330161 sssA Staphylococcus aureus subsp. aureus str. JKD6008 secretory antigen precursor SsaA YP_005743644.1 301457 R 546342 CDS YP_005743645.1 384860925 12330162 302598..302891 1 NC_017341.1 ESAT-6/WXG100 family secreted protein EsxA/YukE 302891 esxA 12330162 esxA Staphylococcus aureus subsp. aureus str. JKD6008 ESAT-6/WXG100 family secreted protein EsxA/YukE YP_005743645.1 302598 D 546342 CDS YP_005743646.1 384860926 12330163 302974..306003 1 NC_017341.1 hypothetical protein 306003 12330163 SAA6008_00257 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743646.1 302974 D 546342 CDS YP_005743647.1 384860927 12330164 306003..306461 1 NC_017341.1 protein secretion system EssA 306461 essA 12330164 essA Staphylococcus aureus subsp. aureus str. JKD6008 protein secretion system EssA YP_005743647.1 306003 D 546342 CDS YP_005743648.1 384860928 12330165 306433..306675 1 NC_017341.1 conserved ubiquitin-like protein 306675 yukD 12330165 yukD Staphylococcus aureus subsp. aureus str. JKD6008 conserved ubiquitin-like protein YP_005743648.1 306433 D 546342 CDS YP_005743649.1 384860929 12330166 306688..308022 1 NC_017341.1 putative secretion system component EssB 308022 essB 12330166 essB Staphylococcus aureus subsp. aureus str. JKD6008 putative secretion system component EssB YP_005743649.1 306688 D 546342 CDS YP_005743650.1 384860930 12330167 308044..312492 1 NC_017341.1 PFAM: cell division protein FtsK/SpoIIIE KEGG: sav:SAV0287 similar to DNA segregation ATPase and related proteins; DNA segregation ATPase-like protein 312492 yukA 12330167 yukA Staphylococcus aureus subsp. aureus str. JKD6008 DNA segregation ATPase-like protein YP_005743650.1 308044 D 546342 CDS YP_005743651.1 384860931 12330168 312495..312761 1 NC_017341.1 hypothetical protein 312761 12330168 SAA6008_00262 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743651.1 312495 D 546342 CDS YP_005743652.1 384860932 12330169 312784..313179 1 NC_017341.1 hypothetical protein 313179 12330169 SAA6008_00263 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743652.1 312784 D 546342 CDS YP_005743653.1 384860933 12330170 313219..314871 1 NC_017341.1 transposase 314871 12330170 SAA6008_00264 Staphylococcus aureus subsp. aureus str. JKD6008 transposase YP_005743653.1 313219 D 546342 CDS YP_005743654.1 384860934 12330171 314887..315531 1 NC_017341.1 hypothetical protein 315531 12330171 SAA6008_00265 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743654.1 314887 D 546342 CDS YP_005743655.1 384860935 12330172 315531..315986 1 NC_017341.1 hypothetical protein 315986 12330172 SAA6008_00266 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743655.1 315531 D 546342 CDS YP_005743656.1 384860936 12330173 316006..316437 1 NC_017341.1 hypothetical protein 316437 12330173 SAA6008_00267 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743656.1 316006 D 546342 CDS YP_005743657.1 384860937 12330174 316461..317048 1 NC_017341.1 hypothetical protein 317048 12330174 SAA6008_00268 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743657.1 316461 D 546342 CDS YP_005743658.1 384860938 12330175 317225..317443 1 NC_017341.1 hypothetical protein 317443 12330175 SAA6008_00269 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743658.1 317225 D 546342 CDS YP_005743659.1 384860939 12330176 317575..318075 1 NC_017341.1 hypothetical protein 318075 12330176 SAA6008_00270 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743659.1 317575 D 546342 CDS YP_005743660.1 384860940 12330177 318086..318577 1 NC_017341.1 part of tandem array of 10 proteins in Staphylococcus aureus; hypothetical protein 318577 12330177 SAA6008_00271 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743660.1 318086 D 546342 CDS YP_005743661.1 384860941 12330178 318870..319343 1 NC_017341.1 membrane protein 319343 12330178 SAA6008_00272 Staphylococcus aureus subsp. aureus str. JKD6008 membrane protein YP_005743661.1 318870 D 546342 CDS YP_005743662.1 384860942 12330179 319358..319732 1 NC_017341.1 Ortholog of SERP0504 from S. epidermidis; hypothetical protein 319732 12330179 SAA6008_00273 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743662.1 319358 D 546342 CDS YP_005743663.1 384860943 12330180 319750..320139 1 NC_017341.1 Ortholog of SERP0505 from S. epidermidis; hypothetical protein 320139 12330180 SAA6008_00274 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743663.1 319750 D 546342 CDS YP_005743664.1 384860944 12330181 320141..320533 1 NC_017341.1 hypothetical protein 320533 12330181 SAA6008_00275 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743664.1 320141 D 546342 CDS YP_005743665.1 384860945 12330182 321049..321405 1 NC_017341.1 hypothetical protein 321405 12330182 SAA6008_00276 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743665.1 321049 D 546342 CDS YP_005743666.1 384860946 12330185 323204..323581 1 NC_017341.1 hypothetical protein 323581 12330185 SAA6008_00280 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743666.1 323204 D 546342 CDS YP_005743667.1 384860947 12330186 complement(323831..324676) 1 NC_017341.1 FNT family formate-nitrite transporter 324676 12330186 SAA6008_00281 Staphylococcus aureus subsp. aureus str. JKD6008 FNT family formate-nitrite transporter YP_005743667.1 323831 R 546342 CDS YP_005743668.1 384860948 12330187 complement(324892..326199) 1 NC_017341.1 branched-chain amino acid transport protein 326199 brnQ 12330187 brnQ Staphylococcus aureus subsp. aureus str. JKD6008 branched-chain amino acid transport protein YP_005743668.1 324892 R 546342 CDS YP_005743669.1 384860949 12330188 326783..327673 1 NC_017341.1 secreted acid phosphatase 327673 12330188 SAA6008_00283 Staphylococcus aureus subsp. aureus str. JKD6008 secreted acid phosphatase YP_005743669.1 326783 D 546342 CDS YP_005743670.1 384860950 12330189 327922..328971 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, membrane protein 328971 12330189 SAA6008_00284 Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, membrane protein YP_005743670.1 327922 D 546342 CDS YP_005743671.1 384860951 12330190 328984..329661 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, binding protein 329661 12330190 SAA6008_00285 Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, binding protein YP_005743671.1 328984 D 546342 CDS YP_005743672.1 384860952 12330191 329869..330900 1 NC_017341.1 contains phosphotransferase system fructose-specific IIC component domain; hypothetical protein 330900 12330191 SAA6008_00286 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743672.1 329869 D 546342 CDS YP_005743673.1 384860953 12330192 331243..332361 1 NC_017341.1 PFAM: PfkB domain protein KEGG: sar:SAR0308 PfkB family carbohydrate kinase; sugar kinase 332361 12330192 SAA6008_00287 Staphylococcus aureus subsp. aureus str. JKD6008 sugar kinase YP_005743673.1 331243 D 546342 CDS YP_005743674.1 384860954 12330193 332336..333259 1 NC_017341.1 pseudouridine-5'-phosphate glycosidase 333259 12330193 SAA6008_00288 Staphylococcus aureus subsp. aureus str. JKD6008 pseudouridine-5'-phosphate glycosidase YP_005743674.1 332336 D 546342 CDS YP_005743675.1 384860955 12330194 333270..334490 1 NC_017341.1 PFAM: Na dependent nucleoside transporter; nucleoside recognition domain protein; Na dependent nucleoside transporter domain protein KEGG: sav:SAV0313 probable pyrimidine nucleoside transport protein; nucleoside permease 334490 12330194 SAA6008_00289 Staphylococcus aureus subsp. aureus str. JKD6008 nucleoside permease YP_005743675.1 333270 D 546342 CDS YP_005743676.1 384860956 12330195 complement(334595..336127) 1 NC_017341.1 TIGRFAM: SSS sodium solute transporter superfamily PFAM: Na+? symporter KEGG: sav:SAV0314 solute:Na+ symporter, SSS family; putative sodium/glucose cotransporter 336127 12330195 SAA6008_00290 Staphylococcus aureus subsp. aureus str. JKD6008 putative sodium/glucose cotransporter YP_005743676.1 334595 R 546342 CDS YP_005743677.1 384860957 12330196 complement(336167..337048) 1 NC_017341.1 putative N-acetylneuraminate lyase 337048 nanA 12330196 nanA Staphylococcus aureus subsp. aureus str. JKD6008 putative N-acetylneuraminate lyase YP_005743677.1 336167 R 546342 CDS YP_005743678.1 384860958 12330197 337206..338066 1 NC_017341.1 ROK family protein 338066 12330197 SAA6008_00292 Staphylococcus aureus subsp. aureus str. JKD6008 ROK family protein YP_005743678.1 337206 D 546342 CDS YP_005743679.1 384860959 12330198 complement(338343..339143) 1 NC_017341.1 RpiR family transcriptional regulator 339143 rpiR 12330198 rpiR Staphylococcus aureus subsp. aureus str. JKD6008 RpiR family transcriptional regulator YP_005743679.1 338343 R 546342 CDS YP_005743680.1 384860960 12330199 339283..339951 1 NC_017341.1 putative N-acetylmannosamine-6-phosphate 2-epimerase 339951 nanE 12330199 nanE Staphylococcus aureus subsp. aureus str. JKD6008 putative N-acetylmannosamine-6-phosphate 2-epimerase YP_005743680.1 339283 D 546342 CDS YP_005743681.1 384860961 12330200 complement(340077..341390) 1 NC_017341.1 hypothetical protein 341390 12330200 SAA6008_00295 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743681.1 340077 R 546342 CDS YP_005743682.1 384860962 12330201 341823..342995 1 NC_017341.1 transposase for IS256 342995 12330201 SAA6008_00296 Staphylococcus aureus subsp. aureus str. JKD6008 transposase for IS256 YP_005743682.1 341823 D 546342 CDS YP_005743683.1 384860963 12330202 343139..345214 1 NC_017341.1 lipase precursor 345214 12330202 SAA6008_00297 Staphylococcus aureus subsp. aureus str. JKD6008 lipase precursor YP_005743683.1 343139 D 546342 CDS YP_005743684.1 384860964 12330203 complement(345456..346283) 1 NC_017341.1 some domain similarity with lipase, esterase, hydrolase; alpha/beta family hydrolase 346283 12330203 SAA6008_00298 Staphylococcus aureus subsp. aureus str. JKD6008 alpha/beta family hydrolase YP_005743684.1 345456 R 546342 CDS YP_005743685.1 384860965 12330204 complement(346341..347555) 1 NC_017341.1 NADH:flavin oxidoreductase / NADH oxidase family protein 347555 12330204 SAA6008_00299 Staphylococcus aureus subsp. aureus str. JKD6008 NADH:flavin oxidoreductase / NADH oxidase family protein YP_005743685.1 346341 R 546342 CDS YP_005743686.1 384860966 12330205 347863..348864 1 NC_017341.1 luciferase-like monooxygenase 348864 12330205 SAA6008_00300 Staphylococcus aureus subsp. aureus str. JKD6008 luciferase-like monooxygenase YP_005743686.1 347863 D 546342 CDS YP_005743687.1 384860967 12330206 348898..349230 1 NC_017341.1 glycine cleavage system H protein 349230 12330206 SAA6008_00301 Staphylococcus aureus subsp. aureus str. JKD6008 glycine cleavage system H protein YP_005743687.1 348898 D 546342 CDS YP_005743688.1 384860968 12330207 349231..350031 1 NC_017341.1 macro domain protein 350031 12330207 SAA6008_00302 Staphylococcus aureus subsp. aureus str. JKD6008 macro domain protein YP_005743688.1 349231 D 546342 CDS YP_005743689.1 384860969 12330208 350057..350965 1 NC_017341.1 some similarity to NAD-dependent protein deacetylases, SIR2 family; hypothetical protein 350965 12330208 SAA6008_00303 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743689.1 350057 D 546342 CDS YP_005743690.1 384860970 12330209 350943..351965 1 NC_017341.1 lipoyltransferase and lipoate-protein ligase 351965 lplA1 12330209 lplA1 Staphylococcus aureus subsp. aureus str. JKD6008 lipoyltransferase and lipoate-protein ligase YP_005743690.1 350943 D 546342 CDS YP_005743691.1 384860971 12330210 352281..353306 1 NC_017341.1 3-beta hydroxysteroid dehydrogenase/isomerase 353306 12330210 SAA6008_00305 Staphylococcus aureus subsp. aureus str. JKD6008 3-beta hydroxysteroid dehydrogenase/isomerase YP_005743691.1 352281 D 546342 CDS YP_005743692.1 384860972 12330211 complement(353400..354746) 1 NC_017341.1 PTS system ascorbate-specific IIC component 354746 ulaA 12330211 ulaA Staphylococcus aureus subsp. aureus str. JKD6008 PTS system ascorbate-specific IIC component YP_005743692.1 353400 R 546342 CDS YP_005743693.1 384860973 12330212 complement(354761..355045) 1 NC_017341.1 phosphotransferase system, lactose/cellobiose-specific IIB subunit 355045 12330212 SAA6008_00307 Staphylococcus aureus subsp. aureus str. JKD6008 phosphotransferase system, lactose/cellobiose-specific IIB subunit YP_005743693.1 354761 R 546342 CDS YP_005743694.1 384860974 12330213 complement(355047..355490) 1 NC_017341.1 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 355490 12330213 SAA6008_00308 Staphylococcus aureus subsp. aureus str. JKD6008 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 YP_005743694.1 355047 R 546342 CDS YP_005743695.1 384860975 12330214 complement(355495..357450) 1 NC_017341.1 BglG family transcriptional antiterminator 357450 12330214 SAA6008_00309 Staphylococcus aureus subsp. aureus str. JKD6008 BglG family transcriptional antiterminator YP_005743695.1 355495 R 546342 CDS YP_005743696.1 384860976 12330215 357662..358081 1 NC_017341.1 MepR represses expression of MepA and MepB as well as autoregulating its own expression; mepA/mepB repressor and autoregulator 358081 mepR 12330215 mepR Staphylococcus aureus subsp. aureus str. JKD6008 mepA/mepB repressor and autoregulator YP_005743696.1 357662 D 546342 CDS YP_005743697.1 384860977 12330216 358188..359543 1 NC_017341.1 part of mepABR system; MATE family multi-antimicrobial extrusion protein 359543 mepA 12330216 mepA Staphylococcus aureus subsp. aureus str. JKD6008 MATE family multi-antimicrobial extrusion protein YP_005743697.1 358188 D 546342 CDS YP_005743698.1 384860978 12330217 359647..360087 1 NC_017341.1 The mepRAB gene cluster of Staphylococcus aureus encodes a MarR family repressor (MepR; known to repress mepA expression), a MATE family multidrug efflux pump (MepA), and a protein of unknown function (MepB).; MATE family multidrug efflux pump protein 360087 mepB 12330217 mepB Staphylococcus aureus subsp. aureus str. JKD6008 MATE family multidrug efflux pump protein YP_005743698.1 359647 D 546342 CDS YP_005743699.1 384860979 12330218 complement(360170..361528) 1 NC_017341.1 putative glycerol-3-phosphate transporter 361528 glpT 12330218 glpT Staphylococcus aureus subsp. aureus str. JKD6008 putative glycerol-3-phosphate transporter YP_005743699.1 360170 R 546342 CDS YP_005743700.1 384860980 12330219 361866..362762 1 NC_017341.1 Glyoxalase/bleomycin resistance protein/dioxygenase 362762 12330219 SAA6008_00314 Staphylococcus aureus subsp. aureus str. JKD6008 Glyoxalase/bleomycin resistance protein/dioxygenase YP_005743700.1 361866 D 546342 CDS YP_005743701.1 384860981 12330220 362776..363837 1 NC_017341.1 luciferase-like monooxygenase 363837 12330220 SAA6008_00315 Staphylococcus aureus subsp. aureus str. JKD6008 luciferase-like monooxygenase YP_005743701.1 362776 D 546342 CDS YP_005743702.1 384860982 12330221 363851..364417 1 NC_017341.1 NADH-dependent FMN reductase 364417 12330221 SAA6008_00316 Staphylococcus aureus subsp. aureus str. JKD6008 NADH-dependent FMN reductase YP_005743702.1 363851 D 546342 CDS YP_005743703.1 384860983 12330222 complement(364477..365472) 1 NC_017341.1 hypothetical protein 365472 12330222 SAA6008_00317 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743703.1 364477 R 546342 CDS YP_005743704.1 384860984 12330223 365471..365878 1 NC_017341.1 hypothetical protein 365878 12330223 SAA6008_00318 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743704.1 365471 D 546342 CDS YP_005743705.1 384860985 12330224 365891..366436 1 NC_017341.1 PFAM: GCN5-related N-acetyltransferase KEGG: sav:SAV0342 similar to ribosomal-protein-serine N-acetyltransferase; ribosomal-protein-serine N-acetyltransferase 366436 12330224 SAA6008_00319 Staphylococcus aureus subsp. aureus str. JKD6008 ribosomal-protein-serine N-acetyltransferase YP_005743705.1 365891 D 546342 CDS YP_005743706.1 384860986 12330225 366704..367558 1 NC_017341.1 imelysin 367558 12330225 SAA6008_00320 Staphylococcus aureus subsp. aureus str. JKD6008 imelysin YP_005743706.1 366704 D 546342 CDS YP_005743707.1 384860987 12330226 367555..368784 1 NC_017341.1 TAT-translocated Dyp-type peroxidase 368784 12330226 SAA6008_00321 Staphylococcus aureus subsp. aureus str. JKD6008 TAT-translocated Dyp-type peroxidase YP_005743707.1 367555 D 546342 CDS YP_005743708.1 384860988 12330227 368765..370477 1 NC_017341.1 Putative high-affinity Fe2+/Pb2+ permease-like protein 370477 12330227 SAA6008_00322 Staphylococcus aureus subsp. aureus str. JKD6008 Putative high-affinity Fe2+/Pb2+ permease-like protein YP_005743708.1 368765 D 546342 CDS YP_005743709.1 384860989 12330228 complement(370569..371174) 1 NC_017341.1 Sec-independent periplasmic protein translocase 371174 tatC 12330228 tatC Staphylococcus aureus subsp. aureus str. JKD6008 Sec-independent periplasmic protein translocase YP_005743709.1 370569 R 546342 CDS YP_005743710.1 384860990 12330229 complement(371287..371502) 1 NC_017341.1 twin-arginine translocation protein, TatA/E family subunit 371502 tatA 12330229 tatA Staphylococcus aureus subsp. aureus str. JKD6008 twin-arginine translocation protein, TatA/E family subunit YP_005743710.1 371287 R 546342 CDS YP_005743711.1 384860991 12330230 complement(371611..372000) 1 NC_017341.1 putative bacteriophage envelope protein 372000 12330230 SAA6008_00325 Staphylococcus aureus subsp. aureus str. JKD6008 putative bacteriophage envelope protein YP_005743711.1 371611 R 546342 CDS YP_005743712.1 384860992 12330231 372241..372444 1 NC_017341.1 putative transcriptional regulator 372444 12330231 SAA6008_00326 Staphylococcus aureus subsp. aureus str. JKD6008 putative transcriptional regulator YP_005743712.1 372241 D 546342 CDS YP_005743713.1 384860993 12330232 372441..373154 1 NC_017341.1 hypothetical protein 373154 12330232 SAA6008_00327 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743713.1 372441 D 546342 CDS YP_005743714.1 384860994 12330233 373179..374021 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, ABC protein 374021 12330233 SAA6008_00328 Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, ABC protein YP_005743714.1 373179 D 546342 CDS YP_005743715.1 384860995 12330234 374021..374650 1 NC_017341.1 hypothetical protein 374650 12330234 SAA6008_00329 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743715.1 374021 D 546342 CDS YP_005743716.1 384860996 12330235 complement(375017..376150) 1 NC_017341.1 low temperature requirement protein A 376150 ltrA 12330235 ltrA Staphylococcus aureus subsp. aureus str. JKD6008 low temperature requirement protein A YP_005743716.1 375017 R 546342 CDS YP_005743717.1 384860997 12330236 376689..377870 1 NC_017341.1 acetyl-CoA acetyltransferase 377870 paaJ 12330236 paaJ Staphylococcus aureus subsp. aureus str. JKD6008 acetyl-CoA acetyltransferase YP_005743717.1 376689 D 546342 CDS YP_005743718.1 384860998 12330237 complement(377953..378705) 1 NC_017341.1 potentially involved in antibiotic synthesis; putative cyclase enzyme 378705 12330237 SAA6008_00332 Staphylococcus aureus subsp. aureus str. JKD6008 putative cyclase enzyme YP_005743718.1 377953 R 546342 CDS YP_005743719.1 384860999 12330238 complement(378748..380976) 1 NC_017341.1 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 380976 metE 12330238 metE Staphylococcus aureus subsp. aureus str. JKD6008 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase YP_005743719.1 378748 R 546342 CDS YP_005743720.1 384861000 12330239 complement(380973..382814) 1 NC_017341.1 bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase 382814 metH 12330239 metH Staphylococcus aureus subsp. aureus str. JKD6008 bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase YP_005743720.1 380973 R 546342 CDS YP_005743721.1 384861001 12330240 complement(382783..383943) 1 NC_017341.1 bifunctional cystathionine gamma-lyase/gamma-synthase 383943 12330240 SAA6008_00335 Staphylococcus aureus subsp. aureus str. JKD6008 bifunctional cystathionine gamma-lyase/gamma-synthase YP_005743721.1 382783 R 546342 CDS YP_005743722.1 384861002 12330241 complement(383940..385043) 1 NC_017341.1 bifunctional cystathionine gamma-lyase/gamma-synthase 385043 12330241 SAA6008_00336 Staphylococcus aureus subsp. aureus str. JKD6008 bifunctional cystathionine gamma-lyase/gamma-synthase YP_005743722.1 383940 R 546342 CDS YP_005743723.1 384861003 12330242 385716..386552 1 NC_017341.1 chromosome/plasmid partitioning protein ParB 386552 parB 12330242 parB Staphylococcus aureus subsp. aureus str. JKD6008 chromosome/plasmid partitioning protein ParB YP_005743723.1 385716 D 546342 CDS YP_005743724.1 384861004 12330243 386709..387590 1 NC_017341.1 MscS family small conductance mechanosensitive ion channel protein 387590 12330243 SAA6008_00338 Staphylococcus aureus subsp. aureus str. JKD6008 MscS family small conductance mechanosensitive ion channel protein YP_005743724.1 386709 D 546342 CDS YP_005743725.1 384861005 12330244 387620..387823 1 NC_017341.1 hypothetical protein 387823 12330244 SAA6008_00339 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743725.1 387620 D 546342 CDS YP_005743726.1 384861006 12330245 387835..388932 1 NC_017341.1 GTP-dependent nucleic acid-binding protein EngD 388932 ychF 12330245 ychF Staphylococcus aureus subsp. aureus str. JKD6008 GTP-dependent nucleic acid-binding protein EngD YP_005743726.1 387835 D 546342 CDS YP_005743727.1 384861007 12330246 complement(389018..389209) 1 NC_017341.1 hypothetical protein 389209 12330246 SAA6008_00341 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743727.1 389018 R 546342 CDS YP_005743728.1 384861008 12330247 389453..389749 1 NC_017341.1 30S ribosomal protein S6 389749 rpsF 12330247 rpsF Staphylococcus aureus subsp. aureus str. JKD6008 30S ribosomal protein S6 YP_005743728.1 389453 D 546342 CDS YP_005743729.1 384861009 12330248 389770..390273 1 NC_017341.1 ssDNA-binding protein 390273 ssb 12330248 ssb Staphylococcus aureus subsp. aureus str. JKD6008 ssDNA-binding protein YP_005743729.1 389770 D 546342 CDS YP_005743730.1 384861010 12330249 390325..390567 1 NC_017341.1 30S ribosomal protein S18 390567 rpsR 12330249 rpsR Staphylococcus aureus subsp. aureus str. JKD6008 30S ribosomal protein S18 YP_005743730.1 390325 D 546342 CDS YP_005743731.1 384861011 12330250 complement(390799..391518) 1 NC_017341.1 PemK-like growth inhibitor 391518 12330250 SAA6008_00345 Staphylococcus aureus subsp. aureus str. JKD6008 PemK-like growth inhibitor YP_005743731.1 390799 R 546342 CDS YP_005743732.1 384861012 12330251 complement(391631..392845) 1 NC_017341.1 pathogenicity island protein, integrase 392845 12330251 SAA6008_00346 Staphylococcus aureus subsp. aureus str. JKD6008 pathogenicity island protein, integrase YP_005743732.1 391631 R 546342 CDS YP_005743733.1 384861013 12330252 complement(393006..393629) 1 NC_017341.1 DNA-binding protein 393629 12330252 SAA6008_00347 Staphylococcus aureus subsp. aureus str. JKD6008 DNA-binding protein YP_005743733.1 393006 R 546342 CDS YP_005743734.1 384861014 12330253 393778..393942 1 NC_017341.1 putative DNA-binding protein 393942 12330253 SAA6008_00348 Staphylococcus aureus subsp. aureus str. JKD6008 putative DNA-binding protein YP_005743734.1 393778 D 546342 CDS YP_005743735.1 384861015 12330254 393943..394215 1 NC_017341.1 pathogenicity island DNA-binding protein 394215 12330254 SAA6008_00349 Staphylococcus aureus subsp. aureus str. JKD6008 pathogenicity island DNA-binding protein YP_005743735.1 393943 D 546342 CDS YP_005743736.1 384861016 12330255 394227..394400 1 NC_017341.1 hypothetical bovine pathogenicity island protein 394400 12330255 SAA6008_00350 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical bovine pathogenicity island protein YP_005743736.1 394227 D 546342 CDS YP_005743737.1 384861017 12330256 394439..394570 1 NC_017341.1 hypothetical bovine pathogenicity island protein 394570 12330256 SAA6008_00351 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical bovine pathogenicity island protein YP_005743737.1 394439 D 546342 CDS YP_005743738.1 384861018 12330257 394572..394955 1 NC_017341.1 Staphylococcus aureus pathogenicity island; identified by similarity to GB:AAG29614.1; hypothetical protein 394955 12330257 SAA6008_00352 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743738.1 394572 D 546342 CDS YP_005743739.1 384861019 12330258 394956..395282 1 NC_017341.1 mobile element-associated protein 395282 12330258 SAA6008_00353 Staphylococcus aureus subsp. aureus str. JKD6008 mobile element-associated protein YP_005743739.1 394956 D 546342 CDS YP_005743740.1 384861020 12330259 395347..396216 1 NC_017341.1 Ortholog hypothetical protein SH2094. Contains a primase domain.; putative phage primase 396216 12330259 SAA6008_00354 Staphylococcus aureus subsp. aureus str. JKD6008 putative phage primase YP_005743740.1 395347 D 546342 CDS YP_005743741.1 384861021 12330260 396228..397598 1 NC_017341.1 putative DNA primase-phage associated 397598 12330260 SAA6008_00355 Staphylococcus aureus subsp. aureus str. JKD6008 putative DNA primase-phage associated YP_005743741.1 396228 D 546342 CDS YP_005743742.1 384861022 12330261 397841..398197 1 NC_017341.1 ortholog of hypothetical protein SH2092. Putative phage-associated protein.; hypothetical protein 398197 12330261 SAA6008_00356 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743742.1 397841 D 546342 CDS YP_005743743.1 384861023 12330262 398199..398462 1 NC_017341.1 Ortholog of hypothetical protein SAV0793; hypothetical protein 398462 12330262 SAA6008_00357 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743743.1 398199 D 546342 CDS YP_005743744.1 384861024 12330263 398464..399105 1 NC_017341.1 phage protein 399105 12330263 SAA6008_00358 Staphylococcus aureus subsp. aureus str. JKD6008 phage protein YP_005743744.1 398464 D 546342 CDS YP_005743745.1 384861025 12330264 399641..399982 1 NC_017341.1 putative mobile element-associated protein 399982 12330264 SAA6008_00359 Staphylococcus aureus subsp. aureus str. JKD6008 putative mobile element-associated protein YP_005743745.1 399641 D 546342 CDS YP_005743746.1 384861026 12330265 400013..400666 1 NC_017341.1 hypothetical protein 400666 12330265 SAA6008_00360 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743746.1 400013 D 546342 CDS YP_005743747.1 384861027 12330266 400719..401246 1 NC_017341.1 spore coat protein 401246 12330266 SAA6008_00361 Staphylococcus aureus subsp. aureus str. JKD6008 spore coat protein YP_005743747.1 400719 D 546342 CDS YP_005743748.1 384861028 12330267 401249..401590 1 NC_017341.1 hypothetical protein 401590 12330267 SAA6008_00362 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743748.1 401249 D 546342 CDS YP_005743749.1 384861029 12330268 401587..402156 1 NC_017341.1 bacteriophage terminase small subunit 402156 12330268 SAA6008_00363 Staphylococcus aureus subsp. aureus str. JKD6008 bacteriophage terminase small subunit YP_005743749.1 401587 D 546342 CDS YP_005743750.1 384861030 12330269 402433..403401 1 NC_017341.1 abortive infection bacteriophage resistance protein 403401 12330269 SAA6008_00364 Staphylococcus aureus subsp. aureus str. JKD6008 abortive infection bacteriophage resistance protein YP_005743750.1 402433 D 546342 CDS YP_005743751.1 384861031 12330270 403579..403980 1 NC_017341.1 hypothetical protein 403980 12330270 SAA6008_00365 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743751.1 403579 D 546342 CDS YP_005743752.1 384861032 12330271 404098..404610 1 NC_017341.1 Homology to bovine pathogenicity island protein Orf3; hypothetical protein 404610 12330271 SAA6008_00366 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743752.1 404098 D 546342 CDS YP_005743753.1 384861033 12330272 complement(405597..406571) 1 NC_017341.1 putative abortive infection bacteriophage resistance protein 406571 12330272 SAA6008_00367 Staphylococcus aureus subsp. aureus str. JKD6008 putative abortive infection bacteriophage resistance protein YP_005743753.1 405597 R 546342 CDS YP_005743754.1 384861034 12330274 407481..408092 1 NC_017341.1 putative staphylococcal enterotoxin; superantigen-like protein 408092 12330274 SAA6008_00370 Staphylococcus aureus subsp. aureus str. JKD6008 superantigen-like protein YP_005743754.1 407481 D 546342 CDS YP_005743755.1 384861035 12330275 408461..408829 1 NC_017341.1 hypothetical protein 408829 12330275 SAA6008_00372 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743755.1 408461 D 546342 CDS YP_005743756.1 384861036 12330276 409010..409582 1 NC_017341.1 putative secreted protease inhibitor 409582 12330276 SAA6008_00373 Staphylococcus aureus subsp. aureus str. JKD6008 putative secreted protease inhibitor YP_005743756.1 409010 D 546342 CDS YP_005743757.1 384861037 12330277 complement(409720..409983) 1 NC_017341.1 hypothetical protein 409983 12330277 SAA6008_00374 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743757.1 409720 R 546342 CDS YP_005743758.1 384861038 12330278 410283..410534 1 NC_017341.1 hypothetical protein 410534 12330278 SAA6008_00375 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743758.1 410283 D 546342 CDS YP_005743759.1 384861039 12330279 410960..411541 1 NC_017341.1 putative phosphoglycerate mutase family protein 411541 12330279 SAA6008_00376 Staphylococcus aureus subsp. aureus str. JKD6008 putative phosphoglycerate mutase family protein YP_005743759.1 410960 D 546342 CDS YP_005743760.1 384861040 12330280 complement(411607..411999) 1 NC_017341.1 hypothetical protein 411999 12330280 SAA6008_00377 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743760.1 411607 R 546342 CDS YP_005743761.1 384861041 12330281 complement(412245..412871) 1 NC_017341.1 hypothetical protein 412871 12330281 SAA6008_00378 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743761.1 412245 R 546342 CDS YP_005743762.1 384861042 12330282 complement(412944..413201) 1 NC_017341.1 hypothetical protein 413201 12330282 SAA6008_00379 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743762.1 412944 R 546342 CDS YP_005743763.1 384861043 12330283 complement(413316..414839) 1 NC_017341.1 alkyl hydroperoxide reductase, large subunit 414839 ahpF 12330283 ahpF Staphylococcus aureus subsp. aureus str. JKD6008 alkyl hydroperoxide reductase, large subunit YP_005743763.1 413316 R 546342 CDS YP_005743764.1 384861044 12330284 complement(414855..415424) 1 NC_017341.1 alkyl hydroperoxide reductase subunit C 415424 ahpC 12330284 ahpC Staphylococcus aureus subsp. aureus str. JKD6008 alkyl hydroperoxide reductase subunit C YP_005743764.1 414855 R 546342 CDS YP_005743765.1 384861045 12330285 415907..416671 1 NC_017341.1 PFAM: nitroreductase KEGG: sav:SAV0382 hypothetical protein, similar to nitro/flavin reductase; Nitroreductase family protein 416671 12330285 SAA6008_00382 Staphylococcus aureus subsp. aureus str. JKD6008 Nitroreductase family protein YP_005743765.1 415907 D 546342 CDS YP_005743766.1 384861046 12330286 complement(416752..418140) 1 NC_017341.1 sodium/dicarboxylare symporter 418140 12330286 SAA6008_00383 Staphylococcus aureus subsp. aureus str. JKD6008 sodium/dicarboxylare symporter YP_005743766.1 416752 R 546342 CDS YP_005743767.1 384861047 12330287 complement(419117..420073) 1 NC_017341.1 hypothetical protein 420073 12330287 SAA6008_00384 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743767.1 419117 R 546342 CDS YP_005743768.1 384861048 12330288 complement(420191..420853) 1 NC_017341.1 hypothetical protein 420853 12330288 SAA6008_00385 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743768.1 420191 R 546342 CDS YP_005743769.1 384861049 12330289 complement(420996..421403) 1 NC_017341.1 putative heat induced stress protein 421403 yflT 12330289 yflT Staphylococcus aureus subsp. aureus str. JKD6008 putative heat induced stress protein YP_005743769.1 420996 R 546342 CDS YP_005743770.1 384861050 12330290 421916..422494 1 NC_017341.1 putative xanthine phosphoribosyltransferase 422494 xprT 12330290 xprT Staphylococcus aureus subsp. aureus str. JKD6008 putative xanthine phosphoribosyltransferase YP_005743770.1 421916 D 546342 CDS YP_005743771.1 384861051 12330291 422494..423762 1 NC_017341.1 NCS2 family nucleobase:cation symporter-2 423762 pbuX 12330291 pbuX Staphylococcus aureus subsp. aureus str. JKD6008 NCS2 family nucleobase:cation symporter-2 YP_005743771.1 422494 D 546342 CDS YP_005743772.1 384861052 12330292 423800..425266 1 NC_017341.1 putative inosine-5'-monophosphate dehydrogenase 425266 guaB 12330292 guaB Staphylococcus aureus subsp. aureus str. JKD6008 putative inosine-5'-monophosphate dehydrogenase YP_005743772.1 423800 D 546342 CDS YP_005743773.1 384861053 12330293 425291..426832 1 NC_017341.1 bifunctional GMP synthase/glutamine amidotransferase protein 426832 guaA 12330293 guaA Staphylococcus aureus subsp. aureus str. JKD6008 bifunctional GMP synthase/glutamine amidotransferase protein YP_005743773.1 425291 D 546342 CDS YP_005743774.1 384861054 12330294 complement(426900..428093) 1 NC_017341.1 integrase-like protein 428093 12330294 SAA6008_00391 Staphylococcus aureus subsp. aureus str. JKD6008 integrase-like protein YP_005743774.1 426900 R 546342 CDS YP_005743775.1 384861055 12330295 complement(429045..429527) 1 NC_017341.1 ortholog (SAV0395) in Staphylococcus aureus subsp. aureus Mu50; Sigma-70 Region 4 protein 429527 12330295 SAA6008_00392 Staphylococcus aureus subsp. aureus str. JKD6008 Sigma-70 Region 4 protein YP_005743775.1 429045 R 546342 CDS YP_005743776.1 384861056 12330296 429998..430351 1 NC_017341.1 Present in Mu50 and Mu3, hypothetical protein SAHV_0394 [Staphylococcus aureus subsp. aureus Mu3]; putative transcriptional regulator 430351 12330296 SAA6008_00393 Staphylococcus aureus subsp. aureus str. JKD6008 putative transcriptional regulator YP_005743776.1 429998 D 546342 CDS YP_005743777.1 384861057 12330297 complement(430695..432629) 1 NC_017341.1 orthologs in Mu3 and Mu50, tetracycline resistance protein [Staphylococcus aureus subsp. aureus Mu50]; tetracycline resistance protein TetM 432629 tetM 12330297 tetM Staphylococcus aureus subsp. aureus str. JKD6008 tetracycline resistance protein TetM YP_005743777.1 430695 R 546342 CDS YP_005743778.1 384861058 12330298 complement(432991..433953) 1 NC_017341.1 orthologs present in Mu3 and Mu50; hypothetical protein 433953 12330298 SAA6008_00395 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743778.1 432991 R 546342 CDS YP_005743779.1 384861059 12330299 complement(433937..434929) 1 NC_017341.1 orthologs present Mu3 and Mu50, similar to lipoprotein, NLP/P60 family; hypothetical protein 434929 12330299 SAA6008_00396 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743779.1 433937 R 546342 CDS YP_005743780.1 384861060 12330300 complement(434956..436983) 1 NC_017341.1 Contains weak transmembrane amino acid transporter protein domain; hypothetical protein 436983 12330300 SAA6008_00397 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743780.1 434956 R 546342 CDS YP_005743781.1 384861061 12330301 complement(436980..439433) 1 NC_017341.1 putative ATP/GTP-binding protein 439433 12330301 SAA6008_00398 Staphylococcus aureus subsp. aureus str. JKD6008 putative ATP/GTP-binding protein YP_005743781.1 436980 R 546342 CDS YP_005743782.1 384861062 12330302 complement(439417..439812) 1 NC_017341.1 hypothetical protein 439812 12330302 SAA6008_00399 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743782.1 439417 R 546342 CDS YP_005743783.1 384861063 12330303 complement(439884..440513) 1 NC_017341.1 hypothetical protein 440513 12330303 SAA6008_00400 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743783.1 439884 R 546342 CDS YP_005743784.1 384861064 12330304 complement(440542..441270) 1 NC_017341.1 Transposase-associated ATP/GTP binding protein 441270 12330304 SAA6008_00401 Staphylococcus aureus subsp. aureus str. JKD6008 Transposase-associated ATP/GTP binding protein YP_005743784.1 440542 R 546342 CDS YP_005743785.1 384861065 12330305 complement(441270..442697) 1 NC_017341.1 putative transposase 442697 12330305 SAA6008_00402 Staphylococcus aureus subsp. aureus str. JKD6008 putative transposase YP_005743785.1 441270 R 546342 CDS YP_005743786.1 384861066 12330307 complement(442965..443465) 1 NC_017341.1 putative antirestriction protein 443465 ardA 12330307 ardA Staphylococcus aureus subsp. aureus str. JKD6008 putative antirestriction protein YP_005743786.1 442965 R 546342 CDS YP_005743787.1 384861067 12330308 complement(443526..444287) 1 NC_017341.1 hypothetical protein 444287 12330308 SAA6008_00405 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743787.1 443526 R 546342 CDS YP_005743788.1 384861068 12330309 complement(444347..444517) 1 NC_017341.1 hypothetical protein 444517 12330309 SAA6008_00406 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743788.1 444347 R 546342 CDS YP_005743789.1 384861069 12330310 complement(444852..446036) 1 NC_017341.1 replication initiation factor 446036 12330310 SAA6008_00407 Staphylococcus aureus subsp. aureus str. JKD6008 replication initiation factor YP_005743789.1 444852 R 546342 CDS YP_005743790.1 384861070 12330311 complement(446218..447621) 1 NC_017341.1 DNA segregation ATPase FtsK/SpoIIIE 447621 12330311 SAA6008_00409 Staphylococcus aureus subsp. aureus str. JKD6008 DNA segregation ATPase FtsK/SpoIIIE YP_005743790.1 446218 R 546342 CDS YP_005743791.1 384861071 12330312 complement(447643..448416) 1 NC_017341.1 hypothetical protein 448416 12330312 SAA6008_00410 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743791.1 447643 R 546342 CDS YP_005743792.1 384861072 12330313 complement(448426..448803) 1 NC_017341.1 hypothetical protein 448803 12330313 SAA6008_00411 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743792.1 448426 R 546342 CDS YP_005743793.1 384861073 12330314 complement(448824..449138) 1 NC_017341.1 hypothetical protein 449138 12330314 SAA6008_00412 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743793.1 448824 R 546342 CDS YP_005743794.1 384861074 12330315 complement(449338..451131) 1 NC_017341.1 UvrD/REP helicase 451131 uvrD 12330315 uvrD Staphylococcus aureus subsp. aureus str. JKD6008 UvrD/REP helicase YP_005743794.1 449338 R 546342 CDS YP_005743795.1 384861075 12330316 complement(451128..453317) 1 NC_017341.1 recombinational DNA repair ATPase, RecF_1 453317 recF_1 12330316 recF_1 Staphylococcus aureus subsp. aureus str. JKD6008 recombinational DNA repair ATPase, RecF_1 YP_005743795.1 451128 R 546342 CDS YP_005743796.1 384861076 12330317 complement(453451..454302) 1 NC_017341.1 transposase 454302 12330317 SAA6008_00415 Staphylococcus aureus subsp. aureus str. JKD6008 transposase YP_005743796.1 453451 R 546342 CDS YP_005743797.1 384861077 12330318 complement(455142..455678) 1 NC_017341.1 Similar to USA300HOU_0415; hypothetical protein 455678 12330318 SAA6008_00416 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743797.1 455142 R 546342 CDS YP_005743798.1 384861078 12330319 complement(456071..456775) 1 NC_017341.1 PemK-like protein 456775 12330319 SAA6008_00417 Staphylococcus aureus subsp. aureus str. JKD6008 PemK-like protein YP_005743798.1 456071 R 546342 CDS YP_005743799.1 384861079 12330321 complement(457707..457859) 1 NC_017341.1 hypothetical protein 457859 12330321 SAA6008_00419 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743799.1 457707 R 546342 CDS YP_005743800.1 384861080 12330322 complement(458383..458742) 1 NC_017341.1 hypothetical protein 458742 12330322 SAA6008_00420 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743800.1 458383 R 546342 CDS YP_005743801.1 384861081 12330323 complement(458761..459606) 1 NC_017341.1 cobalt (Co2+) ABC superfamily ATP binding cassette transporter, membrane protein 459606 12330323 SAA6008_00421 Staphylococcus aureus subsp. aureus str. JKD6008 cobalt (Co2+) ABC superfamily ATP binding cassette transporter, membrane protein YP_005743801.1 458761 R 546342 CDS YP_005743802.1 384861082 12330324 460078..460758 1 NC_017341.1 superantigen-like protein 460758 set6 12330324 set6 Staphylococcus aureus subsp. aureus str. JKD6008 superantigen-like protein YP_005743802.1 460078 D 546342 CDS YP_005743803.1 384861083 12330325 461044..461739 1 NC_017341.1 superantigen-like protein 461739 set7 12330325 set7 Staphylococcus aureus subsp. aureus str. JKD6008 superantigen-like protein YP_005743803.1 461044 D 546342 CDS YP_005743804.1 384861084 12330326 462030..463088 1 NC_017341.1 superantigen-like protein 463088 set8 12330326 set8 Staphylococcus aureus subsp. aureus str. JKD6008 superantigen-like protein YP_005743804.1 462030 D 546342 CDS YP_005743805.1 384861085 12330327 463207..463344 1 NC_017341.1 hypothetical protein 463344 12330327 SAA6008_00425 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743805.1 463207 D 546342 CDS YP_005743806.1 384861086 12330328 463453..464379 1 NC_017341.1 these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation; superantigen-like protein 464379 12330328 SAA6008_00426 Staphylococcus aureus subsp. aureus str. JKD6008 superantigen-like protein YP_005743806.1 463453 D 546342 CDS YP_005743807.1 384861087 12330329 464743..465447 1 NC_017341.1 superantigen-like protein 5 465447 set10 12330329 set10 Staphylococcus aureus subsp. aureus str. JKD6008 superantigen-like protein 5 YP_005743807.1 464743 D 546342 CDS YP_005743808.1 384861088 12330331 467008..467703 1 NC_017341.1 superantigen-like protein 7 467703 set11 12330331 set11 Staphylococcus aureus subsp. aureus str. JKD6008 superantigen-like protein 7 YP_005743808.1 467008 D 546342 CDS YP_005743809.1 384861089 12330332 468047..468745 1 NC_017341.1 superantigen-like protein 468745 set12 12330332 set12 Staphylococcus aureus subsp. aureus str. JKD6008 superantigen-like protein YP_005743809.1 468047 D 546342 CDS YP_005743810.1 384861090 12330333 469125..469823 1 NC_017341.1 these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation; superantigen-like protein, exotoxin 13 469823 set13 12330333 set13 Staphylococcus aureus subsp. aureus str. JKD6008 superantigen-like protein, exotoxin 13 YP_005743810.1 469125 D 546342 CDS YP_005743811.1 384861091 12330334 470189..470872 1 NC_017341.1 superantigen-like protein, exotoxin 14 470872 set14 12330334 set14 Staphylococcus aureus subsp. aureus str. JKD6008 superantigen-like protein, exotoxin 14 YP_005743811.1 470189 D 546342 CDS YP_005743812.1 384861092 12330335 471136..472692 1 NC_017341.1 Pathogenicity island SaPIn2; Type I restriction-modification system methyltransferase subunit 472692 hsdM 12330335 hsdM Staphylococcus aureus subsp. aureus str. JKD6008 Type I restriction-modification system methyltransferase subunit YP_005743812.1 471136 D 546342 CDS YP_005743813.1 384861093 12330336 472685..473896 1 NC_017341.1 Pathogenicity island SaPIn2; restriction endonuclease S subunit 473896 hsdS 12330336 hsdS Staphylococcus aureus subsp. aureus str. JKD6008 restriction endonuclease S subunit YP_005743813.1 472685 D 546342 CDS YP_005743814.1 384861094 12330337 474279..474956 1 NC_017341.1 superantigen-like protein 474956 set15 12330337 set15 Staphylococcus aureus subsp. aureus str. JKD6008 superantigen-like protein YP_005743814.1 474279 D 546342 CDS YP_005743815.1 384861095 12330338 475005..476486 1 NC_017341.1 hypothetical protein 476486 12330338 SAA6008_00437 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743815.1 475005 D 546342 CDS YP_005743816.1 384861096 12330339 complement(476590..476898) 1 NC_017341.1 hypothetical protein 476898 12330339 SAA6008_00438 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743816.1 476590 R 546342 CDS YP_005743817.1 384861097 12330340 477266..478054 1 NC_017341.1 staphylococcal tandem lipoprotein 478054 lpl1 12330340 lpl1 Staphylococcus aureus subsp. aureus str. JKD6008 staphylococcal tandem lipoprotein YP_005743817.1 477266 D 546342 CDS YP_005743818.1 384861098 12330341 478118..478546 1 NC_017341.1 truncated staphylococcal tandem lipoprotein 478546 12330341 SAA6008_00440 Staphylococcus aureus subsp. aureus str. JKD6008 truncated staphylococcal tandem lipoprotein YP_005743818.1 478118 D 546342 CDS YP_005743819.1 384861099 12330343 479776..480507 1 NC_017341.1 identified by match to protein family HMM PF04507; match to protein family HMM TIGR01742; staphylococcal tandem lipoprotein 480507 12330343 SAA6008_00443 Staphylococcus aureus subsp. aureus str. JKD6008 staphylococcal tandem lipoprotein YP_005743819.1 479776 D 546342 CDS YP_005743820.1 384861100 12330344 480539..481330 1 NC_017341.1 staphylococcal tandem lipoprotein 481330 lpl3 12330344 lpl3 Staphylococcus aureus subsp. aureus str. JKD6008 staphylococcal tandem lipoprotein YP_005743820.1 480539 D 546342 CDS YP_005743821.1 384861101 12330345 481451..482176 1 NC_017341.1 identified by match to protein family HMM PF04507; match to protein family HMM TIGR01742; tandem lipoprotein 482176 lpl8 12330345 lpl8 Staphylococcus aureus subsp. aureus str. JKD6008 tandem lipoprotein YP_005743821.1 481451 D 546342 CDS YP_005743822.1 384861102 12330346 482373..483167 1 NC_017341.1 TIGRFAM: putative lipoprotein PFAM: protein of unknown function DUF576; hypothetical protein 483167 12330346 SAA6008_00446 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743822.1 482373 D 546342 CDS YP_005743823.1 384861103 12330347 483186..483971 1 NC_017341.1 identified by match to protein family HMM PF04507; match to protein family HMM TIGR01742; tandem lipoprotein 483971 lpl8_1 12330347 lpl8_1 Staphylococcus aureus subsp. aureus str. JKD6008 tandem lipoprotein YP_005743823.1 483186 D 546342 CDS YP_005743824.1 384861104 12330348 484229..484966 1 NC_017341.1 staphylococcal tandem lipoprotein 484966 lpl2 12330348 lpl2 Staphylococcus aureus subsp. aureus str. JKD6008 staphylococcal tandem lipoprotein YP_005743824.1 484229 D 546342 CDS YP_005743825.1 384861105 12330349 484950..486284 1 NC_017341.1 hypothetical protein 486284 12330349 SAA6008_00449 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743825.1 484950 D 546342 CDS YP_005743826.1 384861106 12330350 486284..486604 1 NC_017341.1 hypothetical protein 486604 12330350 SAA6008_00450 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743826.1 486284 D 546342 CDS YP_005743827.1 384861107 12330351 486704..486937 1 NC_017341.1 hypothetical protein 486937 12330351 SAA6008_00451 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743827.1 486704 D 546342 CDS YP_005743828.1 384861108 12330352 complement(487227..487421) 1 NC_017341.1 hypothetical protein 487421 12330352 SAA6008_00452 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743828.1 487227 R 546342 CDS YP_005743829.1 384861109 12330353 487606..488808 1 NC_017341.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein KEGG: sav:SAV0450 putative cobalamin synthesis protein; putative GTPases (G3E family) 488808 cobW 12330353 cobW Staphylococcus aureus subsp. aureus str. JKD6008 putative GTPases (G3E family) YP_005743829.1 487606 D 546342 CDS YP_005743830.1 384861110 12330354 489077..489205 1 NC_017341.1 hypothetical protein 489205 12330354 SAA6008_00454 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743830.1 489077 D 546342 CDS YP_005743832.1 384861112 12330356 complement(489593..489661) 1 NC_017341.1 phenol-soluble modulin alpha-3 489661 12330356 SAA6008_09901 Staphylococcus aureus subsp. aureus str. JKD6008 phenol-soluble modulin alpha-3 YP_005743832.1 489593 R 546342 CDS YP_005743833.1 384861113 12330357 complement(489713..489778) 1 NC_017341.1 phenol-soluble modulin alpha 2 489778 12330357 SAA6008_09902 Staphylococcus aureus subsp. aureus str. JKD6008 phenol-soluble modulin alpha 2 YP_005743833.1 489713 R 546342 CDS YP_005743834.1 384861114 12330358 complement(489810..489875) 1 NC_017341.1 phenol-soluble modulin alpha 1 489875 12330358 SAA6008_09903 Staphylococcus aureus subsp. aureus str. JKD6008 phenol-soluble modulin alpha 1 YP_005743834.1 489810 R 546342 CDS YP_005743835.1 384861115 12330359 490396..491880 1 NC_017341.1 putative NADH-Ubiquinone/plastoquinone (complex I) protein 491880 ndhF 12330359 ndhF Staphylococcus aureus subsp. aureus str. JKD6008 putative NADH-Ubiquinone/plastoquinone (complex I) protein YP_005743835.1 490396 D 546342 CDS YP_005743836.1 384861116 12330360 491893..494598 1 NC_017341.1 hypothetical protein 494598 12330360 SAA6008_00456 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743836.1 491893 D 546342 CDS YP_005743837.1 384861117 12330361 494760..495122 1 NC_017341.1 hypothetical protein 495122 12330361 SAA6008_00457 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743837.1 494760 D 546342 CDS YP_005743838.1 384861118 12330362 complement(495351..495749) 1 NC_017341.1 hypothetical protein 495749 12330362 SAA6008_00458 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743838.1 495351 R 546342 CDS YP_005743839.1 384861119 12330363 495805..496479 1 NC_017341.1 membrane-associated lipid phosphatase PAP2 496479 12330363 SAA6008_00459 Staphylococcus aureus subsp. aureus str. JKD6008 membrane-associated lipid phosphatase PAP2 YP_005743839.1 495805 D 546342 CDS YP_005743840.1 384861120 12330364 496516..497250 1 NC_017341.1 esterase/lipase 497250 12330364 SAA6008_00460 Staphylococcus aureus subsp. aureus str. JKD6008 esterase/lipase YP_005743840.1 496516 D 546342 CDS YP_005743841.1 384861121 12330365 497428..497541 1 NC_017341.1 hypothetical protein 497541 12330365 SAA6008_00461 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743841.1 497428 D 546342 CDS YP_005743842.1 384861122 12330366 497703..499043 1 NC_017341.1 sodium:neurotransmitter symporter family protein 499043 12330366 SAA6008_00462 Staphylococcus aureus subsp. aureus str. JKD6008 sodium:neurotransmitter symporter family protein YP_005743842.1 497703 D 546342 CDS YP_005743843.1 384861123 12330367 499260..500174 1 NC_017341.1 cysteine synthase/cystathionine beta-synthase family protein 500174 cysM 12330367 cysM Staphylococcus aureus subsp. aureus str. JKD6008 cysteine synthase/cystathionine beta-synthase family protein YP_005743843.1 499260 D 546342 CDS YP_005743844.1 384861124 12330368 500158..501300 1 NC_017341.1 bifunctional cystathionine gamma-lyase/gamma-synthase 501300 metB 12330368 metB Staphylococcus aureus subsp. aureus str. JKD6008 bifunctional cystathionine gamma-lyase/gamma-synthase YP_005743844.1 500158 D 546342 CDS YP_005743845.1 384861125 12330370 502623..503282 1 NC_017341.1 binding-protein-dependent transport system inner membrane protein 503282 12330370 SAA6008_00466 Staphylococcus aureus subsp. aureus str. JKD6008 binding-protein-dependent transport system inner membrane protein YP_005743845.1 502623 D 546342 CDS YP_005743846.1 384861126 12330371 503319..504161 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, binding protein 504161 12330371 SAA6008_00467 Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, binding protein YP_005743846.1 503319 D 546342 CDS YP_005743847.1 384861127 12330372 504493..505497 1 NC_017341.1 identified by match to protein family HMM PF01476; match to protein family HMM PF05257; N-acetylmuramoyl-L-alanine amidase 505497 12330372 SAA6008_00468 Staphylococcus aureus subsp. aureus str. JKD6008 N-acetylmuramoyl-L-alanine amidase YP_005743847.1 504493 D 546342 CDS YP_005743848.1 384861128 12330373 complement(505682..505951) 1 NC_017341.1 hypothetical protein 505951 12330373 SAA6008_00469 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743848.1 505682 R 546342 CDS YP_005743849.1 384861129 12330374 506100..506495 1 NC_017341.1 PFAM: NUDIX hydrolase KEGG: sab:SAB0416 hypothetical protein; NADH pyrophosphatase 506495 12330374 SAA6008_00470 Staphylococcus aureus subsp. aureus str. JKD6008 NADH pyrophosphatase YP_005743849.1 506100 D 546342 CDS YP_005743850.1 384861130 12330375 506485..506970 1 NC_017341.1 N-acetyltransferase GCN5 506970 12330375 SAA6008_00471 Staphylococcus aureus subsp. aureus str. JKD6008 N-acetyltransferase GCN5 YP_005743850.1 506485 D 546342 CDS YP_005743851.1 384861131 12330376 complement(507139..507921) 1 NC_017341.1 conserved multitransmembrane protein 507921 12330376 SAA6008_00472 Staphylococcus aureus subsp. aureus str. JKD6008 conserved multitransmembrane protein YP_005743851.1 507139 R 546342 CDS YP_005743852.1 384861132 12330377 complement(507918..509030) 1 NC_017341.1 PFAM: YibE/F family protein KEGG: sao:SAOUHSC_00433 hypothetical protein; hypothetical protein 509030 12330377 SAA6008_00473 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743852.1 507918 R 546342 CDS YP_005743853.1 384861133 12330378 complement(509151..510035) 1 NC_017341.1 transcriptional activator of glutamate synthase operon 510035 gltC 12330378 gltC Staphylococcus aureus subsp. aureus str. JKD6008 transcriptional activator of glutamate synthase operon YP_005743853.1 509151 R 546342 CDS YP_005743854.1 384861134 12330379 510216..514715 1 NC_017341.1 glutamate synthase (NADPH), large subunit 514715 gltB 12330379 gltB Staphylococcus aureus subsp. aureus str. JKD6008 glutamate synthase (NADPH), large subunit YP_005743854.1 510216 D 546342 CDS YP_005743855.1 384861135 12330380 514733..516196 1 NC_017341.1 glutamate synthase (NADPH) small subunit 516196 gltD 12330380 gltD Staphylococcus aureus subsp. aureus str. JKD6008 glutamate synthase (NADPH) small subunit YP_005743855.1 514733 D 546342 CDS YP_005743856.1 384861136 12330383 518520..520160 1 NC_017341.1 alpha, alpha-phosphotrehalase 520160 treC 12330383 treC Staphylococcus aureus subsp. aureus str. JKD6008 alpha, alpha-phosphotrehalase YP_005743856.1 518520 D 546342 CDS YP_005743857.1 384861137 12330384 520185..520913 1 NC_017341.1 TIGRFAM: trehalose operon repressor PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein KEGG: sao:SAOUHSC_00439 hypothetical protein; trehalose operon transcription repressor treR 520913 treR 12330384 treR Staphylococcus aureus subsp. aureus str. JKD6008 trehalose operon transcription repressor treR YP_005743857.1 520185 D 546342 CDS YP_005743858.1 384861138 12330385 521552..522076 1 NC_017341.1 acetyltransferase (GNAT) family protein 522076 12330385 SAA6008_00481 Staphylococcus aureus subsp. aureus str. JKD6008 acetyltransferase (GNAT) family protein YP_005743858.1 521552 D 546342 CDS YP_005743859.1 384861139 12330386 522145..523842 1 NC_017341.1 DNA-directed DNA polymerase III subunit gamma and tau 523842 dnaX 12330386 dnaX Staphylococcus aureus subsp. aureus str. JKD6008 DNA-directed DNA polymerase III subunit gamma and tau YP_005743859.1 522145 D 546342 CDS YP_005743860.1 384861140 12330387 523932..524249 1 NC_017341.1 hypothetical protein 524249 12330387 SAA6008_00483 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743860.1 523932 D 546342 CDS YP_005743861.1 384861141 12330388 524256..524852 1 NC_017341.1 putative recombination protein 524852 recR 12330388 recR Staphylococcus aureus subsp. aureus str. JKD6008 putative recombination protein YP_005743861.1 524256 D 546342 CDS YP_005743862.1 384861142 12330392 531616..532953 1 NC_017341.1 arginine/lysine/ornithine decarboxylase 532953 ldcC 12330392 ldcC Staphylococcus aureus subsp. aureus str. JKD6008 arginine/lysine/ornithine decarboxylase YP_005743862.1 531616 D 546342 CDS YP_005743863.1 384861143 12330393 532955..533572 1 NC_017341.1 putative thymidylate kinase 533572 tmk 12330393 tmk Staphylococcus aureus subsp. aureus str. JKD6008 putative thymidylate kinase YP_005743863.1 532955 D 546342 CDS YP_005743864.1 384861144 12330394 533600..533929 1 NC_017341.1 hypothetical protein 533929 12330394 SAA6008_00487 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743864.1 533600 D 546342 CDS YP_005743865.1 384861145 12330395 534143..535069 1 NC_017341.1 KEGG: sav:SAV0484 probable DNA polymerase III delta prime subunit; DNA polymerase III subunit delta' 535069 holB 12330395 holB Staphylococcus aureus subsp. aureus str. JKD6008 DNA polymerase III subunit delta' YP_005743865.1 534143 D 546342 CDS YP_005743866.1 384861146 12330396 535070..535873 1 NC_017341.1 hypothetical protein 535873 12330396 SAA6008_00489 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743866.1 535070 D 546342 CDS YP_005743867.1 384861147 12330397 535890..536237 1 NC_017341.1 DNA replication initiation control protein YabA 536237 12330397 SAA6008_00490 Staphylococcus aureus subsp. aureus str. JKD6008 DNA replication initiation control protein YabA YP_005743867.1 535890 D 546342 CDS YP_005743868.1 384861148 12330398 536511..537236 1 NC_017341.1 O-methyltransferase 537236 12330398 SAA6008_00491 Staphylococcus aureus subsp. aureus str. JKD6008 O-methyltransferase YP_005743868.1 536511 D 546342 CDS YP_005743869.1 384861149 12330399 537229..537477 1 NC_017341.1 putative GIY-YIG nuclease 537477 12330399 SAA6008_00492 Staphylococcus aureus subsp. aureus str. JKD6008 putative GIY-YIG nuclease YP_005743869.1 537229 D 546342 CDS YP_005743870.1 384861150 12330400 537479..538318 1 NC_017341.1 tetrapyrrole (corrin/porphyrin) methylase 538318 12330400 SAA6008_00493 Staphylococcus aureus subsp. aureus str. JKD6008 tetrapyrrole (corrin/porphyrin) methylase YP_005743870.1 537479 D 546342 CDS YP_005743871.1 384861151 12330401 538603..540576 1 NC_017341.1 putative methionyl-tRNA synthetase 540576 metS 12330401 metS Staphylococcus aureus subsp. aureus str. JKD6008 putative methionyl-tRNA synthetase YP_005743871.1 538603 D 546342 CDS YP_005743872.1 384861152 12330402 540607..541380 1 NC_017341.1 Mg-dependent DNase 541380 tatP 12330402 tatP Staphylococcus aureus subsp. aureus str. JKD6008 Mg-dependent DNase YP_005743872.1 540607 D 546342 CDS YP_005743873.1 384861153 12330403 541547..542083 1 NC_017341.1 ribonuclease M5 542083 12330403 SAA6008_00496 Staphylococcus aureus subsp. aureus str. JKD6008 ribonuclease M5 YP_005743873.1 541547 D 546342 CDS YP_005743874.1 384861154 12330404 542076..542987 1 NC_017341.1 dimethyladenosine transferase 542987 ksgA 12330404 ksgA Staphylococcus aureus subsp. aureus str. JKD6008 dimethyladenosine transferase YP_005743874.1 542076 D 546342 CDS YP_005743875.1 384861155 12330405 543087..543350 1 NC_017341.1 PFAM: protein of unknown function DUF1021; hypothetical protein 543350 12330405 SAA6008_00498 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743875.1 543087 D 546342 CDS YP_005743876.1 384861156 12330406 543660..544508 1 NC_017341.1 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 544508 ispE 12330406 ispE Staphylococcus aureus subsp. aureus str. JKD6008 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_005743876.1 543660 D 546342 CDS YP_005743877.1 384861157 12330407 544570..545346 1 NC_017341.1 pur operon repressor 545346 purR 12330407 purR Staphylococcus aureus subsp. aureus str. JKD6008 pur operon repressor YP_005743877.1 544570 D 546342 CDS YP_005743878.1 384861158 12330408 545363..545743 1 NC_017341.1 may also be involved in the regulation of purine biosynthesis; endoribonuclease L-PSP 545743 12330408 SAA6008_00501 Staphylococcus aureus subsp. aureus str. JKD6008 endoribonuclease L-PSP YP_005743878.1 545363 D 546342 CDS YP_005743879.1 384861159 12330409 545815..546117 1 NC_017341.1 putative septation protein spoVG 546117 spoVG 12330409 spoVG Staphylococcus aureus subsp. aureus str. JKD6008 putative septation protein spoVG YP_005743879.1 545815 D 546342 CDS YP_005743880.1 384861160 12330410 546307..546438 1 NC_017341.1 hypothetical protein 546438 12330410 SAA6008_00503 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743880.1 546307 D 546342 CDS YP_005743881.1 384861161 12330411 546482..547813 1 NC_017341.1 putative UDP-N-acetylglucosamine pyrophosphorylase 547813 gcaD 12330411 gcaD Staphylococcus aureus subsp. aureus str. JKD6008 putative UDP-N-acetylglucosamine pyrophosphorylase YP_005743881.1 546482 D 546342 CDS YP_005743882.1 384861162 12330412 548005..548925 1 NC_017341.1 ribose-phosphate pyrophosphokinase 548925 prs 12330412 prs Staphylococcus aureus subsp. aureus str. JKD6008 ribose-phosphate pyrophosphokinase YP_005743882.1 548005 D 546342 CDS YP_005743883.1 384861163 12330413 549075..549728 1 NC_017341.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress respon; 50S ribosomal protein L25 Ctc-form 549728 rplY 12330413 rplY Staphylococcus aureus subsp. aureus str. JKD6008 50S ribosomal protein L25 Ctc-form YP_005743883.1 549075 D 546342 CDS YP_005743884.1 384861164 12330414 550039..550611 1 NC_017341.1 putative peptidyl-tRNA hydrolase 550611 pth 12330414 pth Staphylococcus aureus subsp. aureus str. JKD6008 putative peptidyl-tRNA hydrolase YP_005743884.1 550039 D 546342 CDS YP_005743885.1 384861165 12330415 550611..554117 1 NC_017341.1 transcription-repair coupling factor 554117 mfd 12330415 mfd Staphylococcus aureus subsp. aureus str. JKD6008 transcription-repair coupling factor YP_005743885.1 550611 D 546342 CDS YP_005743886.1 384861166 12330416 554107..555633 1 NC_017341.1 MOP superfamily PST family polysaccharide transporter 555633 12330416 SAA6008_00509 Staphylococcus aureus subsp. aureus str. JKD6008 MOP superfamily PST family polysaccharide transporter YP_005743886.1 554107 D 546342 CDS YP_005743887.1 384861167 12330417 555633..556826 1 NC_017341.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; MazG nucleotide pyrophosphohydrolase KEGG: sav:SAV0505 nucleoside triphosphate pyrophosphohydrolase-like protein; nucleoside triphosphate pyrophosphohydrolase 556826 mazG_1 12330417 mazG_1 Staphylococcus aureus subsp. aureus str. JKD6008 nucleoside triphosphate pyrophosphohydrolase YP_005743887.1 555633 D 546342 CDS YP_005743888.1 384861168 12330418 556823..557086 1 NC_017341.1 RNA-binding S4 domain-containing heat shock protein 557086 12330418 SAA6008_00511 Staphylococcus aureus subsp. aureus str. JKD6008 RNA-binding S4 domain-containing heat shock protein YP_005743888.1 556823 D 546342 CDS YP_005743889.1 384861169 12330419 557104..557496 1 NC_017341.1 identified by similarity to EGAD:12437; match to protein family HMM PF04977; cell-division initiation protein 557496 divIC 12330419 divIC Staphylococcus aureus subsp. aureus str. JKD6008 cell-division initiation protein YP_005743889.1 557104 D 546342 CDS YP_005743890.1 384861170 12330420 557601..558002 1 NC_017341.1 polyribonucleotide nucleotidyltransferase 558002 12330420 SAA6008_00513 Staphylococcus aureus subsp. aureus str. JKD6008 polyribonucleotide nucleotidyltransferase YP_005743890.1 557601 D 546342 CDS YP_005743891.1 384861171 12330421 558182..559477 1 NC_017341.1 tRNA(Ile)-lysidine synthetase 559477 tilS 12330421 tilS Staphylococcus aureus subsp. aureus str. JKD6008 tRNA(Ile)-lysidine synthetase YP_005743891.1 558182 D 546342 CDS YP_005743892.1 384861172 12330422 559482..560021 1 NC_017341.1 hypoxanthine-guanine phosphoribosyltransferase 560021 hpt 12330422 hpt Staphylococcus aureus subsp. aureus str. JKD6008 hypoxanthine-guanine phosphoribosyltransferase YP_005743892.1 559482 D 546342 CDS YP_005743893.1 384861173 12330423 560368..562371 1 NC_017341.1 cell-division protein (ATP-dependent Zn metallopeptidase) 562371 ftsH 12330423 ftsH Staphylococcus aureus subsp. aureus str. JKD6008 cell-division protein (ATP-dependent Zn metallopeptidase) YP_005743893.1 560368 D 546342 CDS YP_005743894.1 384861174 12330424 562600..563481 1 NC_017341.1 redox regulated Hsp33-like chaperonin 563481 12330424 SAA6008_00517 Staphylococcus aureus subsp. aureus str. JKD6008 redox regulated Hsp33-like chaperonin YP_005743894.1 562600 D 546342 CDS YP_005743895.1 384861175 12330425 563660..564592 1 NC_017341.1 TIGRFAM: cysteine synthase; cysteine synthase A PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit KEGG: sao:SAOUHSC_00488 hypothetical protein; cysteine synthase (o-acetylserine sulfhydrylase), CysK 564592 cysK 12330425 cysK Staphylococcus aureus subsp. aureus str. JKD6008 cysteine synthase (o-acetylserine sulfhydrylase), CysK YP_005743895.1 563660 D 546342 CDS YP_005743896.1 384861176 12330426 564808..565617 1 NC_017341.1 dihydropteroate synthase chain A synthetase 565617 folP 12330426 folP Staphylococcus aureus subsp. aureus str. JKD6008 dihydropteroate synthase chain A synthetase YP_005743896.1 564808 D 546342 CDS YP_005743897.1 384861177 12330427 565595..565960 1 NC_017341.1 dihydroneopterin aldolase 565960 folB 12330427 folB Staphylococcus aureus subsp. aureus str. JKD6008 dihydroneopterin aldolase YP_005743897.1 565595 D 546342 CDS YP_005743898.1 384861178 12330428 565957..566433 1 NC_017341.1 putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 566433 folK 12330428 folK Staphylococcus aureus subsp. aureus str. JKD6008 putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase YP_005743898.1 565957 D 546342 CDS YP_005743899.1 384861179 12330429 566912..568459 1 NC_017341.1 asparaginyl-tRNA synthetase 568459 lysS 12330429 lysS Staphylococcus aureus subsp. aureus str. JKD6008 asparaginyl-tRNA synthetase YP_005743899.1 566912 D 546342 CDS YP_005743900.1 384861180 12330443 complement(575517..576899) 1 NC_017341.1 putative GntR family transcriptional regulator 576899 12330443 SAA6008_00524 Staphylococcus aureus subsp. aureus str. JKD6008 putative GntR family transcriptional regulator YP_005743900.1 575517 R 546342 CDS YP_005743901.1 384861181 12330444 577003..577890 1 NC_017341.1 pyridoxal biosynthesis lyase 577890 pdxS 12330444 pdxS Staphylococcus aureus subsp. aureus str. JKD6008 pyridoxal biosynthesis lyase YP_005743901.1 577003 D 546342 CDS YP_005743902.1 384861182 12330445 577894..578454 1 NC_017341.1 PFAM: SNO glutamine amidotransferase KEGG: sao:SAOUHSC_00500 glutamine amidotransferase; pyridoxine biosynthesis amidotransferase 578454 12330445 SAA6008_00526 Staphylococcus aureus subsp. aureus str. JKD6008 pyridoxine biosynthesis amidotransferase YP_005743902.1 577894 D 546342 CDS YP_005743903.1 384861183 12330446 complement(578662..579876) 1 NC_017341.1 Na+ dependent nucleoside transporter domain-containing protein 579876 nupC 12330446 nupC Staphylococcus aureus subsp. aureus str. JKD6008 Na+ dependent nucleoside transporter domain-containing protein YP_005743903.1 578662 R 546342 CDS YP_005743904.1 384861184 12330447 580034..580495 1 NC_017341.1 class III stress genes transcriptional repressor 580495 ctsR 12330447 ctsR Staphylococcus aureus subsp. aureus str. JKD6008 class III stress genes transcriptional repressor YP_005743904.1 580034 D 546342 CDS YP_005743905.1 384861185 12330448 580514..581080 1 NC_017341.1 Other SA genomes have given this protein a gene name 'ssaA'.It is a putative UvrB/uvrC motif domain protein.; hypothetical protein 581080 12330448 SAA6008_00529 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743905.1 580514 D 546342 CDS YP_005743906.1 384861186 12330449 581070..582077 1 NC_017341.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein 582077 12330449 SAA6008_00530 Staphylococcus aureus subsp. aureus str. JKD6008 D-isomer specific 2-hydroxyacid dehydrogenase family protein YP_005743906.1 581070 D 546342 CDS YP_005743907.1 384861187 12330450 582091..584547 1 NC_017341.1 PFAM: UvrB/UvrC protein; AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein SMART: AAA ATPase KEGG: sao:SAOUHSC_00505 endopeptidase, putative; Clp protease ATP binding subunit 584547 12330450 SAA6008_00531 Staphylococcus aureus subsp. aureus str. JKD6008 Clp protease ATP binding subunit YP_005743907.1 582091 D 546342 CDS YP_005743908.1 384861188 12330451 585032..586396 1 NC_017341.1 putative DNA repair protein 586396 radA 12330451 radA Staphylococcus aureus subsp. aureus str. JKD6008 putative DNA repair protein YP_005743908.1 585032 D 546342 CDS YP_005743909.1 384861189 12330452 586439..587494 1 NC_017341.1 Integral membrane protein (PIN domain superfamily) 587494 12330452 SAA6008_00533 Staphylococcus aureus subsp. aureus str. JKD6008 Integral membrane protein (PIN domain superfamily) YP_005743909.1 586439 D 546342 CDS YP_005743910.1 384861190 12330453 588051..589505 1 NC_017341.1 putative glutamyl-tRNA synthetase 589505 gltX 12330453 gltX Staphylococcus aureus subsp. aureus str. JKD6008 putative glutamyl-tRNA synthetase YP_005743910.1 588051 D 546342 CDS YP_005743911.1 384861191 12330454 589964..590575 1 NC_017341.1 serine O-acetyltransferase 590575 cysE 12330454 cysE Staphylococcus aureus subsp. aureus str. JKD6008 serine O-acetyltransferase YP_005743911.1 589964 D 546342 CDS YP_005743912.1 384861192 12330455 590559..591959 1 NC_017341.1 cysteinyl-tRNA synthetase 591959 cysS 12330455 cysS Staphylococcus aureus subsp. aureus str. JKD6008 cysteinyl-tRNA synthetase YP_005743912.1 590559 D 546342 CDS YP_005743913.1 384861193 12330456 591952..592356 1 NC_017341.1 ribonuclease III 592356 12330456 SAA6008_00537 Staphylococcus aureus subsp. aureus str. JKD6008 ribonuclease III YP_005743913.1 591952 D 546342 CDS YP_005743914.1 384861194 12330457 592364..593110 1 NC_017341.1 TrmH family RNA methyltransferase 593110 yacO 12330457 yacO Staphylococcus aureus subsp. aureus str. JKD6008 TrmH family RNA methyltransferase YP_005743914.1 592364 D 546342 CDS YP_005743915.1 384861195 12330458 593110..593634 1 NC_017341.1 identified by similarity to EGAD:14028; match to protein family HMM PF05991; hypothetical protein 593634 12330458 SAA6008_00539 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743915.1 593110 D 546342 CDS YP_005743916.1 384861196 12330459 593715..594284 1 NC_017341.1 RNA polymerase factor sigma-70 594284 12330459 SAA6008_00540 Staphylococcus aureus subsp. aureus str. JKD6008 RNA polymerase factor sigma-70 YP_005743916.1 593715 D 546342 CDS YP_005743917.1 384861197 12330460 594598..594780 1 NC_017341.1 forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 594780 secE 12330460 secE Staphylococcus aureus subsp. aureus str. JKD6008 preprotein translocase subunit SecE YP_005743917.1 594598 D 546342 CDS YP_005743918.1 384861198 12330461 594793..595341 1 NC_017341.1 transcription termination/antitermination factor NusG 595341 nusG 12330461 nusG Staphylococcus aureus subsp. aureus str. JKD6008 transcription termination/antitermination factor NusG YP_005743918.1 594793 D 546342 CDS YP_005743919.1 384861199 12330462 595522..595944 1 NC_017341.1 50S ribosomal protein L11 595944 rplK 12330462 rplK Staphylococcus aureus subsp. aureus str. JKD6008 50S ribosomal protein L11 YP_005743919.1 595522 D 546342 CDS YP_005743920.1 384861200 12330463 596152..596844 1 NC_017341.1 50S ribosomal protein L1 596844 rplA 12330463 rplA Staphylococcus aureus subsp. aureus str. JKD6008 50S ribosomal protein L1 YP_005743920.1 596152 D 546342 CDS YP_005743921.1 384861201 12330464 597116..597616 1 NC_017341.1 50S ribosomal protein L10 597616 rplJ 12330464 rplJ Staphylococcus aureus subsp. aureus str. JKD6008 50S ribosomal protein L10 YP_005743921.1 597116 D 546342 CDS YP_005743922.1 384861202 12330465 597659..598027 1 NC_017341.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulat; 50S ribosomal protein L7/L12 598027 rplL 12330465 rplL Staphylococcus aureus subsp. aureus str. JKD6008 50S ribosomal protein L7/L12 YP_005743922.1 597659 D 546342 CDS YP_005743923.1 384861203 12330466 598202..598810 1 NC_017341.1 methyltransferase small domain-containing protein 598810 12330466 SAA6008_00547 Staphylococcus aureus subsp. aureus str. JKD6008 methyltransferase small domain-containing protein YP_005743923.1 598202 D 546342 CDS YP_005743924.1 384861204 12330467 599025..602576 1 NC_017341.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 602576 rpoB 12330467 rpoB Staphylococcus aureus subsp. aureus str. JKD6008 DNA-directed RNA polymerase subunit beta YP_005743924.1 599025 D 546342 CDS YP_005743925.1 384861205 12330468 602740..606336 1 NC_017341.1 DNA-directed RNA polymerase beta' chain protein 606336 rpoC 12330468 rpoC Staphylococcus aureus subsp. aureus str. JKD6008 DNA-directed RNA polymerase beta' chain protein YP_005743925.1 602740 D 546342 CDS YP_005743926.1 384861206 12330469 606458..606727 1 NC_017341.1 putative ribosomal protein L7Ae-like protein 606727 12330469 SAA6008_00550 Staphylococcus aureus subsp. aureus str. JKD6008 putative ribosomal protein L7Ae-like protein YP_005743926.1 606458 D 546342 CDS YP_005743927.1 384861207 12330470 606825..607238 1 NC_017341.1 30S ribosomal protein S12 607238 rpsL 12330470 rpsL Staphylococcus aureus subsp. aureus str. JKD6008 30S ribosomal protein S12 YP_005743927.1 606825 D 546342 CDS YP_005743928.1 384861208 12330471 607304..607774 1 NC_017341.1 30S ribosomal protein S7 607774 rpsG 12330471 rpsG Staphylococcus aureus subsp. aureus str. JKD6008 30S ribosomal protein S7 YP_005743928.1 607304 D 546342 CDS YP_005743929.1 384861209 12330472 607897..609978 1 NC_017341.1 translational elongation factor G 609978 fus 12330472 fus Staphylococcus aureus subsp. aureus str. JKD6008 translational elongation factor G YP_005743929.1 607897 D 546342 CDS YP_005743930.1 384861210 12330473 610195..611379 1 NC_017341.1 translational elongation factor TU 611379 tuf 12330473 tuf Staphylococcus aureus subsp. aureus str. JKD6008 translational elongation factor TU YP_005743930.1 610195 D 546342 CDS YP_005743931.1 384861211 12330474 complement(611661..612836) 1 NC_017341.1 putative N-acyl-L-amino acid amidohydrolase 612836 12330474 SAA6008_00555 Staphylococcus aureus subsp. aureus str. JKD6008 putative N-acyl-L-amino acid amidohydrolase YP_005743931.1 611661 R 546342 CDS YP_005743932.1 384861212 12330475 613007..614194 1 NC_017341.1 putative pyridoxal phosphate-dependent acyltransferase 614194 kbl 12330475 kbl Staphylococcus aureus subsp. aureus str. JKD6008 putative pyridoxal phosphate-dependent acyltransferase YP_005743932.1 613007 D 546342 CDS YP_005743933.1 384861213 12330476 614460..615338 1 NC_017341.1 ThiJ/PfpI family protein 615338 12330476 SAA6008_00557 Staphylococcus aureus subsp. aureus str. JKD6008 ThiJ/PfpI family protein YP_005743933.1 614460 D 546342 CDS YP_005743934.1 384861214 12330477 615588..617135 1 NC_017341.1 Catalyzes the phosphorylation of ribulose to ribulose 5-phosphate. Potential pseudogene, missing several aa from N-term, premature stop codon; ribulokinase 617135 araB 12330477 araB Staphylococcus aureus subsp. aureus str. JKD6008 ribulokinase YP_005743934.1 615588 D 546342 CDS YP_005743935.1 384861215 12330478 617349..618314 1 NC_017341.1 NAD dependent epimerase/dehydratase family protein 618314 capD 12330478 capD Staphylococcus aureus subsp. aureus str. JKD6008 NAD dependent epimerase/dehydratase family protein YP_005743935.1 617349 D 546342 CDS YP_005743936.1 384861216 12330479 618649..619725 1 NC_017341.1 branched-chain amino acid aminotransferase 619725 ilvE 12330479 ilvE Staphylococcus aureus subsp. aureus str. JKD6008 branched-chain amino acid aminotransferase YP_005743936.1 618649 D 546342 CDS YP_005743937.1 384861217 12330480 619755..619871 1 NC_017341.1 hypothetical protein 619871 12330480 SAA6008_00561 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743937.1 619755 D 546342 CDS YP_005743938.1 384861218 12330481 619975..620658 1 NC_017341.1 haloacid dehalogenase-like hydrolase 620658 12330481 SAA6008_00562 Staphylococcus aureus subsp. aureus str. JKD6008 haloacid dehalogenase-like hydrolase YP_005743938.1 619975 D 546342 CDS YP_005743939.1 384861219 12330482 complement(620774..621436) 1 NC_017341.1 deoxynucleoside kinase 621436 12330482 SAA6008_00563 Staphylococcus aureus subsp. aureus str. JKD6008 deoxynucleoside kinase YP_005743939.1 620774 R 546342 CDS YP_005743940.1 384861220 12330483 complement(621429..622076) 1 NC_017341.1 deoxynucleoside kinase 622076 12330483 SAA6008_00564 Staphylococcus aureus subsp. aureus str. JKD6008 deoxynucleoside kinase YP_005743940.1 621429 R 546342 CDS YP_005743941.1 384861221 12330484 622113..622583 1 NC_017341.1 tRNA-specific adenosine deaminase 622583 12330484 SAA6008_00565 Staphylococcus aureus subsp. aureus str. JKD6008 tRNA-specific adenosine deaminase YP_005743941.1 622113 D 546342 CDS YP_005743942.1 384861222 12330485 622754..623599 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, ABC protein 623599 12330485 SAA6008_00566 Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, ABC protein YP_005743942.1 622754 D 546342 CDS YP_005743943.1 384861223 12330486 623620..624186 1 NC_017341.1 putative FMN-dependent NADPH-azoreductase 624186 azo1 12330486 azo1 Staphylococcus aureus subsp. aureus str. JKD6008 putative FMN-dependent NADPH-azoreductase YP_005743943.1 623620 D 546342 CDS YP_005743944.1 384861224 12330488 627833..631873 1 NC_017341.1 Ser-Asp rich fibrinogen/bone sialoprotein-binding protein SdrD 631873 12330488 SAA6008_00570 Staphylococcus aureus subsp. aureus str. JKD6008 Ser-Asp rich fibrinogen/bone sialoprotein-binding protein SdrD YP_005743944.1 627833 D 546342 CDS YP_005743945.1 384861225 12330489 632267..635668 1 NC_017341.1 Ser-Asp rich fibrinogen/bone sialoprotein-binding protein SdrE 635668 12330489 SAA6008_00571 Staphylococcus aureus subsp. aureus str. JKD6008 Ser-Asp rich fibrinogen/bone sialoprotein-binding protein SdrE YP_005743945.1 632267 D 546342 CDS YP_005743946.1 384861226 12330490 635787..637259 1 NC_017341.1 PFAM: glycosyl transferase group 1; Protein of unknown function DUF1975 KEGG: sav:SAV0564 similar to poly (glycerol-phosphate) alpha-glucosyltransferase; poly (glycerol-phosphate) alpha-glucosyltransferase 637259 12330490 SAA6008_00572 Staphylococcus aureus subsp. aureus str. JKD6008 poly (glycerol-phosphate) alpha-glucosyltransferase YP_005743946.1 635787 D 546342 CDS YP_005743947.1 384861227 12330491 complement(637383..638873) 1 NC_017341.1 PFAM: glycosyl transferase group 1; Protein of unknown function DUF1975 KEGG: sav:SAV0565 similar to poly (glycerol-phosphate) alpha-glucosyltransferase; poly (glycerol-phosphate) alpha-glucosyltransferase 638873 12330491 SAA6008_00573 Staphylococcus aureus subsp. aureus str. JKD6008 poly (glycerol-phosphate) alpha-glucosyltransferase YP_005743947.1 637383 R 546342 CDS YP_005743948.1 384861228 12330492 complement(639155..640033) 1 NC_017341.1 putative GTP cyclohydrolase 640033 12330492 SAA6008_00574 Staphylococcus aureus subsp. aureus str. JKD6008 putative GTP cyclohydrolase YP_005743948.1 639155 R 546342 CDS YP_005743949.1 384861229 12330493 complement(640046..640711) 1 NC_017341.1 GlcNAc-PI de-N-acetylase 640711 12330493 SAA6008_00575 Staphylococcus aureus subsp. aureus str. JKD6008 GlcNAc-PI de-N-acetylase YP_005743949.1 640046 R 546342 CDS YP_005743950.1 384861230 12330494 complement(640725..641084) 1 NC_017341.1 hypothetical protein 641084 12330494 SAA6008_00576 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743950.1 640725 R 546342 CDS YP_005743951.1 384861231 12330495 641363..642121 1 NC_017341.1 glucosamine/galactosamine-6-phosphate isomerase 642121 nagB 12330495 nagB Staphylococcus aureus subsp. aureus str. JKD6008 glucosamine/galactosamine-6-phosphate isomerase YP_005743951.1 641363 D 546342 CDS YP_005743952.1 384861232 12330496 642198..642830 1 NC_017341.1 involved in the final step of pyrimidine biosynthesis; 3-hexulose-6-phosphate synthase 642830 hxlA 12330496 hxlA Staphylococcus aureus subsp. aureus str. JKD6008 3-hexulose-6-phosphate synthase YP_005743952.1 642198 D 546342 CDS YP_005743953.1 384861233 12330497 642832..643380 1 NC_017341.1 putative 6-phospho-3-hexuloisomerase 643380 12330497 SAA6008_00579 Staphylococcus aureus subsp. aureus str. JKD6008 putative 6-phospho-3-hexuloisomerase YP_005743953.1 642832 D 546342 CDS YP_005743954.1 384861234 12330498 643493..644140 1 NC_017341.1 putative hydrolase, haloacid dehalogenase-like protein 644140 12330498 SAA6008_00580 Staphylococcus aureus subsp. aureus str. JKD6008 putative hydrolase, haloacid dehalogenase-like protein YP_005743954.1 643493 D 546342 CDS YP_005743955.1 384861235 12330499 644642..646042 1 NC_017341.1 MFS family major facilitator transporter, proline/betaine:cation symporter 646042 proP 12330499 proP Staphylococcus aureus subsp. aureus str. JKD6008 MFS family major facilitator transporter, proline/betaine:cation symporter YP_005743955.1 644642 D 546342 CDS YP_005743956.1 384861236 12330500 646586..647962 1 NC_017341.1 PFAM: AMP-dependent synthetase and ligase. Identified by match to protein family HMM PF00501; long chain fatty acid CoA ligase, VraA 647962 vraA 12330500 vraA Staphylococcus aureus subsp. aureus str. JKD6008 long chain fatty acid CoA ligase, VraA YP_005743956.1 646586 D 546342 CDS YP_005743957.1 384861237 12330501 647964..649103 1 NC_017341.1 acetyl-CoA C-acetyltransferase VraB 649103 vraB 12330501 vraB Staphylococcus aureus subsp. aureus str. JKD6008 acetyl-CoA C-acetyltransferase VraB YP_005743957.1 647964 D 546342 CDS YP_005743958.1 384861238 12330502 649138..649443 1 NC_017341.1 KEGG: sao:SAOUHSC_00559 hypothetical protein. Called vraC in Saa_SO385; hypothetical protein 649443 12330502 SAA6008_00584 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743958.1 649138 D 546342 CDS YP_005743959.1 384861239 12330503 649446..649715 1 NC_017341.1 hypothetical protein 649715 12330503 SAA6008_00585 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743959.1 649446 D 546342 CDS YP_005743960.1 384861240 12330504 complement(649916..650083) 1 NC_017341.1 hypothetical protein 650083 12330504 SAA6008_00586 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743960.1 649916 R 546342 CDS YP_005743961.1 384861241 12330505 complement(650590..651420) 1 NC_017341.1 phosphomethylpyrimidine kinase 651420 thiD1 12330505 thiD1 Staphylococcus aureus subsp. aureus str. JKD6008 phosphomethylpyrimidine kinase YP_005743961.1 650590 R 546342 CDS YP_005743962.1 384861242 12330506 651604..652260 1 NC_017341.1 putative uracil-DNA glycosylase 652260 ung 12330506 ung Staphylococcus aureus subsp. aureus str. JKD6008 putative uracil-DNA glycosylase YP_005743962.1 651604 D 546342 CDS YP_005743963.1 384861243 12330507 652261..652641 1 NC_017341.1 hypothetical protein 652641 12330507 SAA6008_00589 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743963.1 652261 D 546342 CDS YP_005743964.1 384861244 12330508 652774..653142 1 NC_017341.1 hypothetical protein 653142 12330508 SAA6008_00590 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743964.1 652774 D 546342 CDS YP_005743965.1 384861245 12330509 653263..654747 1 NC_017341.1 APC family amino acid-polyamine-organocation transporter 654747 12330509 SAA6008_00591 Staphylococcus aureus subsp. aureus str. JKD6008 APC family amino acid-polyamine-organocation transporter YP_005743965.1 653263 D 546342 CDS YP_005743966.1 384861246 12330510 complement(654889..655224) 1 NC_017341.1 hypothetical protein 655224 12330510 SAA6008_00592 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743966.1 654889 R 546342 CDS YP_005743967.1 384861247 12330511 complement(655354..656118) 1 NC_017341.1 hypothetical protein 656118 12330511 SAA6008_00593 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743967.1 655354 R 546342 CDS YP_005743968.1 384861248 12330512 complement(656667..657419) 1 NC_017341.1 putative heme peroxidase 657419 12330512 SAA6008_00594 Staphylococcus aureus subsp. aureus str. JKD6008 putative heme peroxidase YP_005743968.1 656667 R 546342 CDS YP_005743969.1 384861249 12330513 657587..658573 1 NC_017341.1 putative phosphate acetyltransferase 658573 eutD 12330513 eutD Staphylococcus aureus subsp. aureus str. JKD6008 putative phosphate acetyltransferase YP_005743969.1 657587 D 546342 CDS YP_005743970.1 384861250 12330514 658576..659412 1 NC_017341.1 lipoate-protein ligase A family protein 659412 lplA2 12330514 lplA2 Staphylococcus aureus subsp. aureus str. JKD6008 lipoate-protein ligase A family protein YP_005743970.1 658576 D 546342 CDS YP_005743971.1 384861251 12330515 659999..660919 1 NC_017341.1 mevalonate kinase 660919 mvaK1 12330515 mvaK1 Staphylococcus aureus subsp. aureus str. JKD6008 mevalonate kinase YP_005743971.1 659999 D 546342 CDS YP_005743972.1 384861252 12330516 660924..661907 1 NC_017341.1 mevalonate diphosphate decarboxylase 661907 mvaD 12330516 mvaD Staphylococcus aureus subsp. aureus str. JKD6008 mevalonate diphosphate decarboxylase YP_005743972.1 660924 D 546342 CDS YP_005743973.1 384861253 12330517 661920..662996 1 NC_017341.1 phosphomevalonate kinase 662996 mvaK2 12330517 mvaK2 Staphylococcus aureus subsp. aureus str. JKD6008 phosphomevalonate kinase YP_005743973.1 661920 D 546342 CDS YP_005743974.1 384861254 12330518 663173..663514 1 NC_017341.1 hypothetical protein 663514 12330518 SAA6008_00600 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743974.1 663173 D 546342 CDS YP_005743975.1 384861255 12330519 complement(663566..664888) 1 NC_017341.1 pyridine nucleotide-disulfide reductase 664888 12330519 SAA6008_00601 Staphylococcus aureus subsp. aureus str. JKD6008 pyridine nucleotide-disulfide reductase YP_005743975.1 663566 R 546342 CDS YP_005743976.1 384861256 12330520 complement(664875..665315) 1 NC_017341.1 AsnC family transcriptional regulator 665315 12330520 SAA6008_00602 Staphylococcus aureus subsp. aureus str. JKD6008 AsnC family transcriptional regulator YP_005743976.1 664875 R 546342 CDS YP_005743977.1 384861257 12330521 665940..667349 1 NC_017341.1 some homology to a putative Bacillus transposase; hypothetical protein 667349 12330521 SAA6008_00603 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743977.1 665940 D 546342 CDS YP_005743978.1 384861258 12330522 667353..667979 1 NC_017341.1 hypothetical protein 667979 12330522 SAA6008_00604 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743978.1 667353 D 546342 CDS YP_005743979.1 384861259 12330523 668105..668746 1 NC_017341.1 hypothetical protein 668746 12330523 SAA6008_00605 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743979.1 668105 D 546342 CDS YP_005743980.1 384861260 12330524 668834..669451 1 NC_017341.1 hypothetical protein 669451 12330524 SAA6008_00606 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743980.1 668834 D 546342 CDS YP_005743981.1 384861261 12330525 669526..670155 1 NC_017341.1 hypothetical protein 670155 12330525 SAA6008_00607 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743981.1 669526 D 546342 CDS YP_005743982.1 384861262 12330526 670212..670328 1 NC_017341.1 Present in USA300; hypothetical protein 670328 12330526 SAA6008_00608 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743982.1 670212 D 546342 CDS YP_005743983.1 384861263 12330527 670351..670971 1 NC_017341.1 hypothetical protein 670971 12330527 SAA6008_00609 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743983.1 670351 D 546342 CDS YP_005743984.1 384861264 12330528 671111..671743 1 NC_017341.1 hypothetical protein 671743 12330528 SAA6008_00610 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743984.1 671111 D 546342 CDS YP_005743985.1 384861265 12330530 672294..673466 1 NC_017341.1 transposase for IS256 673466 12330530 SAA6008_00612 Staphylococcus aureus subsp. aureus str. JKD6008 transposase for IS256 YP_005743985.1 672294 D 546342 CDS YP_005743986.1 384861266 12330531 674204..674833 1 NC_017341.1 hypothetical protein 674833 12330531 SAA6008_00613 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743986.1 674204 D 546342 CDS YP_005743987.1 384861267 12330532 674957..675577 1 NC_017341.1 hypothetical protein 675577 12330532 SAA6008_00614 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743987.1 674957 D 546342 CDS YP_005743988.1 384861268 12330533 675707..676270 1 NC_017341.1 hypothetical protein 676270 12330533 SAA6008_00615 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743988.1 675707 D 546342 CDS YP_005743989.1 384861269 12330534 676236..676481 1 NC_017341.1 hypothetical protein 676481 12330534 SAA6008_00616 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743989.1 676236 D 546342 CDS YP_005743990.1 384861270 12330535 676505..677131 1 NC_017341.1 hypothetical protein 677131 12330535 SAA6008_00617 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743990.1 676505 D 546342 CDS YP_005743991.1 384861271 12330536 677401..678339 1 NC_017341.1 oxidoreductase, aldo/keto reductase family 678339 12330536 SAA6008_00618 Staphylococcus aureus subsp. aureus str. JKD6008 oxidoreductase, aldo/keto reductase family YP_005743991.1 677401 D 546342 CDS YP_005743992.1 384861272 12330537 678550..679086 1 NC_017341.1 putative flavodoxin 679086 12330537 SAA6008_00619 Staphylococcus aureus subsp. aureus str. JKD6008 putative flavodoxin YP_005743992.1 678550 D 546342 CDS YP_005743993.1 384861273 12330538 679255..679731 1 NC_017341.1 GNAT family acetyltransferase 679731 12330538 SAA6008_00620 Staphylococcus aureus subsp. aureus str. JKD6008 GNAT family acetyltransferase YP_005743993.1 679255 D 546342 CDS YP_005743994.1 384861274 12330539 679771..681066 1 NC_017341.1 contains a HD sub domain; metal-dependent phosphohydrolase 681066 12330539 SAA6008_00621 Staphylococcus aureus subsp. aureus str. JKD6008 metal-dependent phosphohydrolase YP_005743994.1 679771 D 546342 CDS YP_005743995.1 384861275 12330540 681094..681615 1 NC_017341.1 YwhD familly protein; hypothetical protein 681615 12330540 SAA6008_00622 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743995.1 681094 D 546342 CDS YP_005743996.1 384861276 12330541 682114..683124 1 NC_017341.1 zinc-binding alcohol dehydrogenase 683124 12330541 SAA6008_00623 Staphylococcus aureus subsp. aureus str. JKD6008 zinc-binding alcohol dehydrogenase YP_005743996.1 682114 D 546342 CDS YP_005743997.1 384861277 12330542 683387..683815 1 NC_017341.1 hypothetical protein 683815 12330542 SAA6008_00624 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005743997.1 683387 D 546342 CDS YP_005743998.1 384861278 12330543 683812..685473 1 NC_017341.1 putative arginyl-tRNA synthetase 685473 argS 12330543 argS Staphylococcus aureus subsp. aureus str. JKD6008 putative arginyl-tRNA synthetase YP_005743998.1 683812 D 546342 CDS YP_005743999.1 384861279 12330544 685862..686497 1 NC_017341.1 deoxyribonuclease 686497 12330544 SAA6008_00626 Staphylococcus aureus subsp. aureus str. JKD6008 deoxyribonuclease YP_005743999.1 685862 D 546342 CDS YP_005744000.1 384861280 12330545 686936..687763 1 NC_017341.1 iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein 687763 12330545 SAA6008_00627 Staphylococcus aureus subsp. aureus str. JKD6008 iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein YP_005744000.1 686936 D 546342 CDS YP_005744001.1 384861281 12330546 687875..688861 1 NC_017341.1 iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane protein 688861 12330546 SAA6008_00628 Staphylococcus aureus subsp. aureus str. JKD6008 iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane protein YP_005744001.1 687875 D 546342 CDS YP_005744002.1 384861282 12330547 688916..689635 1 NC_017341.1 haloacid dehalogenase-like hydrolase 689635 12330547 SAA6008_00629 Staphylococcus aureus subsp. aureus str. JKD6008 haloacid dehalogenase-like hydrolase YP_005744002.1 688916 D 546342 CDS YP_005744003.1 384861283 12330548 689619..690419 1 NC_017341.1 putative hydrolase 690419 12330548 SAA6008_00630 Staphylococcus aureus subsp. aureus str. JKD6008 putative hydrolase YP_005744003.1 689619 D 546342 CDS YP_005744004.1 384861284 12330549 690555..691061 1 NC_017341.1 hypothetical protein 691061 12330549 SAA6008_00631 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744004.1 690555 D 546342 CDS YP_005744005.1 384861285 12330550 691223..691939 1 NC_017341.1 hypothetical protein 691939 12330550 SAA6008_00632 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744005.1 691223 D 546342 CDS YP_005744006.1 384861286 12330551 692108..692896 1 NC_017341.1 alpha/beta hydrolase 692896 12330551 SAA6008_00633 Staphylococcus aureus subsp. aureus str. JKD6008 alpha/beta hydrolase YP_005744006.1 692108 D 546342 CDS YP_005744007.1 384861287 12330552 complement(693147..693521) 1 NC_017341.1 staphylococcal accessory regulator family 693521 sarA 12330552 sarA Staphylococcus aureus subsp. aureus str. JKD6008 staphylococcal accessory regulator family YP_005744007.1 693147 R 546342 CDS YP_005744008.1 384861288 12330553 complement(694469..695362) 1 NC_017341.1 hypothetical protein 695362 12330553 SAA6008_00635 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744008.1 694469 R 546342 CDS YP_005744009.1 384861289 12330554 695399..695539 1 NC_017341.1 protein conserved in S.aureus but unannotated; hypothetical protein 695539 12330554 SAA6008_00636 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744009.1 695399 D 546342 CDS YP_005744010.1 384861290 12330555 complement(695593..695817) 1 NC_017341.1 hypothetical protein 695817 12330555 SAA6008_00637 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744010.1 695593 R 546342 CDS YP_005744011.1 384861291 12330556 complement(695834..696037) 1 NC_017341.1 hypothetical protein 696037 12330556 SAA6008_00638 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744011.1 695834 R 546342 CDS YP_005744012.1 384861292 12330557 696196..696756 1 NC_017341.1 phage integrase family protein; DNA integration/recombination/invertion protein 696756 12330557 SAA6008_00639 Staphylococcus aureus subsp. aureus str. JKD6008 DNA integration/recombination/invertion protein YP_005744012.1 696196 D 546342 CDS YP_005744013.1 384861293 12330558 696775..699177 1 NC_017341.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit A, MnhA_1 699177 mnh_A1 12330558 mnh_A1 Staphylococcus aureus subsp. aureus str. JKD6008 monovalent cation/H+ antiporter subunit A, MnhA_1 YP_005744013.1 696775 D 546342 CDS YP_005744014.1 384861294 12330559 699164..699589 1 NC_017341.1 subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation antiporter-3, MnhB_1 699589 mnhB_1 12330559 mnhB_1 Staphylococcus aureus subsp. aureus str. JKD6008 monovalent cation antiporter-3, MnhB_1 YP_005744014.1 699164 D 546342 CDS YP_005744015.1 384861295 12330560 699586..699930 1 NC_017341.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation antiporter-3, MnhC_1 699930 mnhC_1 12330560 mnhC_1 Staphylococcus aureus subsp. aureus str. JKD6008 monovalent cation antiporter-3, MnhC_1 YP_005744015.1 699586 D 546342 CDS YP_005744016.1 384861296 12330561 699935..701416 1 NC_017341.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; in S. meliloti it is known to be involved specifica; monovalent cation antiporter-3, MnhD_1 701416 mnhD_1 12330561 mnhD_1 Staphylococcus aureus subsp. aureus str. JKD6008 monovalent cation antiporter-3, MnhD_1 YP_005744016.1 699935 D 546342 CDS YP_005744017.1 384861297 12330562 701417..701899 1 NC_017341.1 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; monovalent cation antiporter-3, MnhE_1 701899 mnhE_1 12330562 mnhE_1 Staphylococcus aureus subsp. aureus str. JKD6008 monovalent cation antiporter-3, MnhE_1 YP_005744017.1 701417 D 546342 CDS YP_005744018.1 384861298 12330563 701896..702198 1 NC_017341.1 subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation antiporter-3, MnhF_1 702198 mnhF_1 12330563 mnhF_1 Staphylococcus aureus subsp. aureus str. JKD6008 monovalent cation antiporter-3, MnhF_1 YP_005744018.1 701896 D 546342 CDS YP_005744019.1 384861299 12330564 702173..702610 1 NC_017341.1 subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation antiporter-3, MnhG_1 702610 mnhG_1 12330564 mnhG_1 Staphylococcus aureus subsp. aureus str. JKD6008 monovalent cation antiporter-3, MnhG_1 YP_005744019.1 702173 D 546342 CDS YP_005744020.1 384861300 12330565 703118..704992 1 NC_017341.1 sodium/hydrogen exchanger family protein 704992 12330565 SAA6008_00647 Staphylococcus aureus subsp. aureus str. JKD6008 sodium/hydrogen exchanger family protein YP_005744020.1 703118 D 546342 CDS YP_005744021.1 384861301 12330566 complement(705886..706815) 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, binding protein 706815 mntC 12330566 mntC Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, binding protein YP_005744021.1 705886 R 546342 CDS YP_005744022.1 384861302 12330567 complement(706812..707648) 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, membrane protein 707648 mntB 12330567 mntB Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, membrane protein YP_005744022.1 706812 R 546342 CDS YP_005744023.1 384861303 12330568 complement(707642..708385) 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, ABC protein 708385 mntA 12330568 mntA Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, ABC protein YP_005744023.1 707642 R 546342 CDS YP_005744024.1 384861304 12330569 708507..709151 1 NC_017341.1 identified by similarity to GP:1617434; match to protein family HMM PF01325; match to protein family HMM PF02742; match to protein family HMM PF04023; iron-dependent repressor 709151 12330569 SAA6008_00651 Staphylococcus aureus subsp. aureus str. JKD6008 iron-dependent repressor YP_005744024.1 708507 D 546342 CDS YP_005744025.1 384861305 12330570 complement(709231..709983) 1 NC_017341.1 hypothetical protein 709983 12330570 SAA6008_00652 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744025.1 709231 R 546342 CDS YP_005744026.1 384861306 12330571 710219..710983 1 NC_017341.1 teichoic acid biosynthesis protein 710983 wecG 12330571 wecG Staphylococcus aureus subsp. aureus str. JKD6008 teichoic acid biosynthesis protein YP_005744026.1 710219 D 546342 CDS YP_005744027.1 384861307 12330572 complement(711044..711838) 1 NC_017341.1 PFAM: ABC transporter related SMART: AAA ATPase; Teichoic acid export ATP-binding protein, TagH 711838 tagH 12330572 tagH Staphylococcus aureus subsp. aureus str. JKD6008 Teichoic acid export ATP-binding protein, TagH YP_005744027.1 711044 R 546342 CDS YP_005744028.1 384861308 12330573 712185..712997 1 NC_017341.1 teichoic acid ABC superfamily ATP binding cassette transporter, membrane protein 712997 tagG 12330573 tagG Staphylococcus aureus subsp. aureus str. JKD6008 teichoic acid ABC superfamily ATP binding cassette transporter, membrane protein YP_005744028.1 712185 D 546342 CDS YP_005744029.1 384861309 12330574 713150..714199 1 NC_017341.1 teichoic acid biosynthesis protein B 714199 tagB 12330574 tagB Staphylococcus aureus subsp. aureus str. JKD6008 teichoic acid biosynthesis protein B YP_005744029.1 713150 D 546342 CDS YP_005744030.1 384861310 12330575 714250..715257 1 NC_017341.1 teichoic acid biosynthesis protein X 715257 tagX 12330575 tagX Staphylococcus aureus subsp. aureus str. JKD6008 teichoic acid biosynthesis protein X YP_005744030.1 714250 D 546342 CDS YP_005744031.1 384861311 12330576 715320..715718 1 NC_017341.1 glycerol-3-phosphate cytidylyltransferase 715718 tagD 12330576 tagD Staphylococcus aureus subsp. aureus str. JKD6008 glycerol-3-phosphate cytidylyltransferase YP_005744031.1 715320 D 546342 CDS YP_005744032.1 384861312 12330577 complement(715835..717130) 1 NC_017341.1 serine-type D-Ala-D-Ala carboxypeptidase 717130 pbp4 12330577 pbp4 Staphylococcus aureus subsp. aureus str. JKD6008 serine-type D-Ala-D-Ala carboxypeptidase YP_005744032.1 715835 R 546342 CDS YP_005744033.1 384861313 12330578 717551..719278 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, ABC protein 719278 abcA 12330578 abcA Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, ABC protein YP_005744033.1 717551 D 546342 CDS YP_005744034.1 384861314 12330579 719637..720866 1 NC_017341.1 Na+ dependent nucleoside transporter domain-containing protein 720866 nupC2 12330579 nupC2 Staphylococcus aureus subsp. aureus str. JKD6008 Na+ dependent nucleoside transporter domain-containing protein YP_005744034.1 719637 D 546342 CDS YP_005744035.1 384861315 12330580 721391..722224 1 NC_017341.1 putative ABC transporter permease 722224 12330580 SAA6008_00662 Staphylococcus aureus subsp. aureus str. JKD6008 putative ABC transporter permease YP_005744035.1 721391 D 546342 CDS YP_005744036.1 384861316 12330581 722506..723303 1 NC_017341.1 iron (Fe3+) ABC superfamily ATP binding cassette transporter, ABC protein 723303 fhuA 12330581 fhuA Staphylococcus aureus subsp. aureus str. JKD6008 iron (Fe3+) ABC superfamily ATP binding cassette transporter, ABC protein YP_005744036.1 722506 D 546342 CDS YP_005744037.1 384861317 12330582 723399..724343 1 NC_017341.1 iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane protein 724343 fhuB 12330582 fhuB Staphylococcus aureus subsp. aureus str. JKD6008 iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane protein YP_005744037.1 723399 D 546342 CDS YP_005744038.1 384861318 12330583 724532..725356 1 NC_017341.1 ferrichrome transport permease fhuG 725356 12330583 SAA6008_00665 Staphylococcus aureus subsp. aureus str. JKD6008 ferrichrome transport permease fhuG YP_005744038.1 724532 D 546342 CDS YP_005744039.1 384861319 12330584 725593..726558 1 NC_017341.1 dihydroxyacetone kinase family protein 726558 12330584 SAA6008_00666 Staphylococcus aureus subsp. aureus str. JKD6008 dihydroxyacetone kinase family protein YP_005744039.1 725593 D 546342 CDS YP_005744040.1 384861320 12330585 726600..727184 1 NC_017341.1 dihydroxyacetone kinase, DhaL subunit 727184 12330585 SAA6008_00667 Staphylococcus aureus subsp. aureus str. JKD6008 dihydroxyacetone kinase, DhaL subunit YP_005744040.1 726600 D 546342 CDS YP_005744041.1 384861321 12330586 727177..727539 1 NC_017341.1 dihydroxyacetone kinase, phosphotransfer subunit 727539 dhaM 12330586 dhaM Staphylococcus aureus subsp. aureus str. JKD6008 dihydroxyacetone kinase, phosphotransfer subunit YP_005744041.1 727177 D 546342 CDS YP_005744042.1 384861322 12330587 727655..728152 1 NC_017341.1 hypothetical protein 728152 12330587 SAA6008_00669 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744042.1 727655 D 546342 CDS YP_005744043.1 384861323 12330588 728608..729675 1 NC_017341.1 branched-chain amino acid transport system II carrier protein 729675 12330588 SAA6008_00670 Staphylococcus aureus subsp. aureus str. JKD6008 branched-chain amino acid transport system II carrier protein YP_005744043.1 728608 D 546342 CDS YP_005744044.1 384861324 12330589 729826..730869 1 NC_017341.1 PFAM: Alpha/beta hydrolase fold-3 domain protein KEGG: sau:SA0610 hypothetical protein; alpha/beta hydrolase 730869 12330589 SAA6008_00671 Staphylococcus aureus subsp. aureus str. JKD6008 alpha/beta hydrolase YP_005744044.1 729826 D 546342 CDS YP_005744045.1 384861325 12330590 731198..731626 1 NC_017341.1 hypothetical protein 731626 12330590 SAA6008_00672 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744045.1 731198 D 546342 CDS YP_005744046.1 384861326 12330591 complement(731835..732341) 1 NC_017341.1 GNAT family acetyltransferase 732341 12330591 SAA6008_00673 Staphylococcus aureus subsp. aureus str. JKD6008 GNAT family acetyltransferase YP_005744046.1 731835 R 546342 CDS YP_005744047.1 384861327 12330592 732454..733377 1 NC_017341.1 hypothetical protein 733377 12330592 SAA6008_00674 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744047.1 732454 D 546342 CDS YP_005744048.1 384861328 12330593 733393..734067 1 NC_017341.1 winged helix family two component transcriptional regulator 734067 graR 12330593 graR Staphylococcus aureus subsp. aureus str. JKD6008 winged helix family two component transcriptional regulator YP_005744048.1 733393 D 546342 CDS YP_005744049.1 384861329 12330594 734069..735100 1 NC_017341.1 sensor histidine kinase, GraS 735100 graS 12330594 graS Staphylococcus aureus subsp. aureus str. JKD6008 sensor histidine kinase, GraS YP_005744049.1 734069 D 546342 CDS YP_005744050.1 384861330 12330595 735244..736005 1 NC_017341.1 PFAM: ABC transporter related SMART: AAA ATPase; antimicrobial peptide ABC transporter ATPase 736005 12330595 SAA6008_00677 Staphylococcus aureus subsp. aureus str. JKD6008 antimicrobial peptide ABC transporter ATPase YP_005744050.1 735244 D 546342 CDS YP_005744051.1 384861331 12330596 736130..737884 1 NC_017341.1 ABC-type transport system permease component VraG 737884 12330596 SAA6008_00678 Staphylococcus aureus subsp. aureus str. JKD6008 ABC-type transport system permease component VraG YP_005744051.1 736130 D 546342 CDS YP_005744052.1 384861332 12330597 738609..739226 1 NC_017341.1 putative phosphate uptake regulator 739226 12330597 SAA6008_00679 Staphylococcus aureus subsp. aureus str. JKD6008 putative phosphate uptake regulator YP_005744052.1 738609 D 546342 CDS YP_005744053.1 384861333 12330598 739242..740249 1 NC_017341.1 low-affinity inorganic phosphate transporter 740249 pitA 12330598 pitA Staphylococcus aureus subsp. aureus str. JKD6008 low-affinity inorganic phosphate transporter YP_005744053.1 739242 D 546342 CDS YP_005744054.1 384861334 12330599 complement(740837..741634) 1 NC_017341.1 secretory antigen SsaA-like protein 741634 12330599 SAA6008_00681 Staphylococcus aureus subsp. aureus str. JKD6008 secretory antigen SsaA-like protein YP_005744054.1 740837 R 546342 CDS YP_005744055.1 384861335 12330600 742073..742639 1 NC_017341.1 Integral membrane protein interacts with FtsH-like protein 742639 12330600 SAA6008_00682 Staphylococcus aureus subsp. aureus str. JKD6008 Integral membrane protein interacts with FtsH-like protein YP_005744055.1 742073 D 546342 CDS YP_005744056.1 384861336 12330601 743336..745486 1 NC_017341.1 hypothetical protein 745486 12330601 SAA6008_00683 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744056.1 743336 D 546342 CDS YP_005744057.1 384861337 12330602 745632..745991 1 NC_017341.1 staphylococcal accessory regulator protein X 745991 sarX 12330602 sarX Staphylococcus aureus subsp. aureus str. JKD6008 staphylococcal accessory regulator protein X YP_005744057.1 745632 D 546342 CDS YP_005744058.1 384861338 12330603 746181..746897 1 NC_017341.1 hypothetical protein 746897 12330603 SAA6008_00685 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744058.1 746181 D 546342 CDS YP_005744059.1 384861339 12330604 746897..747370 1 NC_017341.1 hypothetical protein 747370 12330604 SAA6008_00686 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744059.1 746897 D 546342 CDS YP_005744060.1 384861340 12330605 747462..747578 1 NC_017341.1 hypothetical protein 747578 12330605 SAA6008_00687 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744060.1 747462 D 546342 CDS YP_005744061.1 384861341 12330606 747834..748367 1 NC_017341.1 hypothetical protein 748367 12330606 SAA6008_00688 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744061.1 747834 D 546342 CDS YP_005744062.1 384861342 12330607 748483..749349 1 NC_017341.1 LysR family transcriptional regulator 749349 12330607 SAA6008_00689 Staphylococcus aureus subsp. aureus str. JKD6008 LysR family transcriptional regulator YP_005744062.1 748483 D 546342 CDS YP_005744063.1 384861343 12330608 749625..750839 1 NC_017341.1 MFS family major facilitator transporter, sugar:cation symporter 750839 12330608 SAA6008_00690 Staphylococcus aureus subsp. aureus str. JKD6008 MFS family major facilitator transporter, sugar:cation symporter YP_005744063.1 749625 D 546342 CDS YP_005744064.1 384861344 12330609 750836..751324 1 NC_017341.1 hypothetical protein 751324 12330609 SAA6008_00691 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744064.1 750836 D 546342 CDS YP_005744065.1 384861345 12330610 complement(751423..752112) 1 NC_017341.1 hypothetical protein 752112 12330610 SAA6008_00692 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744065.1 751423 R 546342 CDS YP_005744066.1 384861346 12330611 752239..752682 1 NC_017341.1 putative acetyltransferase 752682 12330611 SAA6008_00693 Staphylococcus aureus subsp. aureus str. JKD6008 putative acetyltransferase YP_005744066.1 752239 D 546342 CDS YP_005744067.1 384861347 12330612 752749..753144 1 NC_017341.1 hypothetical protein 753144 12330612 SAA6008_00694 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744067.1 752749 D 546342 CDS YP_005744068.1 384861348 12330613 753282..753581 1 NC_017341.1 hypothetical protein 753581 12330613 SAA6008_00695 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744068.1 753282 D 546342 CDS YP_005744069.1 384861349 12330614 753661..754203 1 NC_017341.1 GNAT family acetyltransferase 754203 rimL 12330614 rimL Staphylococcus aureus subsp. aureus str. JKD6008 GNAT family acetyltransferase YP_005744069.1 753661 D 546342 CDS YP_005744070.1 384861350 12330615 complement(754299..754865) 1 NC_017341.1 putative lysine decarboxylase 754865 12330615 SAA6008_00697 Staphylococcus aureus subsp. aureus str. JKD6008 putative lysine decarboxylase YP_005744070.1 754299 R 546342 CDS YP_005744071.1 384861351 12330616 complement(754867..755325) 1 NC_017341.1 hypothetical protein 755325 12330616 SAA6008_00698 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744071.1 754867 R 546342 CDS YP_005744072.1 384861352 12330617 complement(755328..756011) 1 NC_017341.1 hypothetical protein 756011 12330617 SAA6008_00699 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744072.1 755328 R 546342 CDS YP_005744073.1 384861353 12330618 complement(756183..757058) 1 NC_017341.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 757058 uppP 12330618 uppP Staphylococcus aureus subsp. aureus str. JKD6008 undecaprenyl pyrophosphate phosphatase YP_005744073.1 756183 R 546342 CDS YP_005744074.1 384861354 12330619 757334..758908 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, ABC protein 758908 12330619 SAA6008_00701 Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, ABC protein YP_005744074.1 757334 D 546342 CDS YP_005744075.1 384861355 12330620 758905..760578 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, ABC protein 760578 12330620 SAA6008_00702 Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, ABC protein YP_005744075.1 758905 D 546342 CDS YP_005744076.1 384861356 12330621 complement(760705..761148) 1 NC_017341.1 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 761148 12330621 SAA6008_00703 Staphylococcus aureus subsp. aureus str. JKD6008 MarR family transcriptional regulator YP_005744076.1 760705 R 546342 CDS YP_005744077.1 384861357 12330622 761375..762301 1 NC_017341.1 PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein; putative G3E family GTPase 762301 12330622 SAA6008_00704 Staphylococcus aureus subsp. aureus str. JKD6008 putative G3E family GTPase YP_005744077.1 761375 D 546342 CDS YP_005744078.1 384861358 12330623 762416..763312 1 NC_017341.1 PFAM: aldo/keto reductase KEGG: sav:SAV0688 similar to oxidoreductase, aldo/keto reductase family; oxidoreductase, aldo/keto reductase family 763312 12330623 SAA6008_00705 Staphylococcus aureus subsp. aureus str. JKD6008 oxidoreductase, aldo/keto reductase family YP_005744078.1 762416 D 546342 CDS YP_005744079.1 384861359 12330624 763347..763634 1 NC_017341.1 hypothetical protein 763634 12330624 SAA6008_00706 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744079.1 763347 D 546342 CDS YP_005744080.1 384861360 12330625 763917..765470 1 NC_017341.1 DASS family divalent anion:sodium (Na+) symporter 765470 12330625 SAA6008_00707 Staphylococcus aureus subsp. aureus str. JKD6008 DASS family divalent anion:sodium (Na+) symporter YP_005744080.1 763917 D 546342 CDS YP_005744081.1 384861361 12330626 765556..766929 1 NC_017341.1 PFAM: DNA photolyase FAD-binding KEGG: sav:SAV0691 putative deoxyribodipyrimidine photolyase; deoxyribodipyrimidine photolyase 766929 phrB 12330626 phrB Staphylococcus aureus subsp. aureus str. JKD6008 deoxyribodipyrimidine photolyase YP_005744081.1 765556 D 546342 CDS YP_005744082.1 384861362 12330627 complement(767365..767982) 1 NC_017341.1 hypothetical protein 767982 12330627 SAA6008_00709 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744082.1 767365 R 546342 CDS YP_005744083.1 384861363 12330628 complement(768168..768590) 1 NC_017341.1 PFAM: protein of unknown function DUF296 KEGG: sao:SAOUHSC_00702 hypothetical protein; hypothetical protein 768590 12330628 SAA6008_00710 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744083.1 768168 R 546342 CDS YP_005744084.1 384861364 12330629 768799..769965 1 NC_017341.1 multidrug/H+ antiporter 769965 norA 12330629 norA Staphylococcus aureus subsp. aureus str. JKD6008 multidrug/H+ antiporter YP_005744084.1 768799 D 546342 CDS YP_005744085.1 384861365 12330630 770258..770710 1 NC_017341.1 hypothetical protein 770710 12330630 SAA6008_00712 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744085.1 770258 D 546342 CDS YP_005744086.1 384861366 12330631 770884..771366 1 NC_017341.1 putative prolyl-tRNA synthetase 771366 12330631 SAA6008_00713 Staphylococcus aureus subsp. aureus str. JKD6008 putative prolyl-tRNA synthetase YP_005744086.1 770884 D 546342 CDS YP_005744087.1 384861367 12330632 771619..772380 1 NC_017341.1 fructose operon transcriptional repressor 772380 12330632 SAA6008_00714 Staphylococcus aureus subsp. aureus str. JKD6008 fructose operon transcriptional repressor YP_005744087.1 771619 D 546342 CDS YP_005744088.1 384861368 12330633 772377..773297 1 NC_017341.1 fructose 1-phosphate kinase 773297 pfkB 12330633 pfkB Staphylococcus aureus subsp. aureus str. JKD6008 fructose 1-phosphate kinase YP_005744088.1 772377 D 546342 CDS YP_005744089.1 384861369 12330634 773303..775261 1 NC_017341.1 PTS system D-fructose-specific transporter subunit IIABC 775261 12330634 SAA6008_00716 Staphylococcus aureus subsp. aureus str. JKD6008 PTS system D-fructose-specific transporter subunit IIABC YP_005744089.1 773303 D 546342 CDS YP_005744090.1 384861370 12330635 775569..776750 1 NC_017341.1 putative N-acetylglucosamine-6-phosphate deacetylase 776750 nagA 12330635 nagA Staphylococcus aureus subsp. aureus str. JKD6008 putative N-acetylglucosamine-6-phosphate deacetylase YP_005744090.1 775569 D 546342 CDS YP_005744091.1 384861371 12330636 776995..778320 1 NC_017341.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region KEGG: sao:SAOUHSC_00711 hypothetical protein; hypothetical protein 778320 12330636 SAA6008_00718 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744091.1 776995 D 546342 CDS YP_005744092.1 384861372 12330637 778581..779381 1 NC_017341.1 PFAM: aldo/keto reductase KEGG: sav:SAV0703 similar to oxidoreductase, aldo/keto reductase family; oxidoreductase, aldo/keto reductase family 779381 12330637 SAA6008_00719 Staphylococcus aureus subsp. aureus str. JKD6008 oxidoreductase, aldo/keto reductase family YP_005744092.1 778581 D 546342 CDS YP_005744093.1 384861373 12330638 779513..780496 1 NC_017341.1 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase 780496 12330638 SAA6008_00720 Staphylococcus aureus subsp. aureus str. JKD6008 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase YP_005744093.1 779513 D 546342 CDS YP_005744094.1 384861374 12330639 complement(780568..781623) 1 NC_017341.1 integral membrane sensor signal transduction histidine kinase 781623 saeS 12330639 saeS Staphylococcus aureus subsp. aureus str. JKD6008 integral membrane sensor signal transduction histidine kinase YP_005744094.1 780568 R 546342 CDS YP_005744095.1 384861375 12330640 complement(781623..782291) 1 NC_017341.1 winged helix family two component transcriptional regulator 782291 saeR 12330640 saeR Staphylococcus aureus subsp. aureus str. JKD6008 winged helix family two component transcriptional regulator YP_005744095.1 781623 R 546342 CDS YP_005744096.1 384861376 12330641 complement(782284..782757) 1 NC_017341.1 hypothetical protein 782757 12330641 SAA6008_00723 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744096.1 782284 R 546342 CDS YP_005744097.1 384861377 12330642 complement(783099..783539) 1 NC_017341.1 contains signal peptide sequence; hypothetical protein 783539 12330642 SAA6008_00724 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744097.1 783099 R 546342 CDS YP_005744098.1 384861378 12330643 complement(783819..784403) 1 NC_017341.1 hypothetical protein 784403 12330643 SAA6008_00725 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744098.1 783819 R 546342 CDS YP_005744099.1 384861379 12330644 complement(784502..785215) 1 NC_017341.1 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein 785215 queE 12330644 queE Staphylococcus aureus subsp. aureus str. JKD6008 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein YP_005744099.1 784502 R 546342 CDS YP_005744100.1 384861380 12330645 complement(785219..785638) 1 NC_017341.1 6-pyruvoyl-tetrahydropterin synthase 785638 12330645 SAA6008_00727 Staphylococcus aureus subsp. aureus str. JKD6008 6-pyruvoyl-tetrahydropterin synthase YP_005744100.1 785219 R 546342 CDS YP_005744101.1 384861381 12330646 complement(785640..786308) 1 NC_017341.1 queuosine biosynthesis protein QueC 786308 queC 12330646 queC Staphylococcus aureus subsp. aureus str. JKD6008 queuosine biosynthesis protein QueC YP_005744101.1 785640 R 546342 CDS YP_005744102.1 384861382 12330647 786659..787252 1 NC_017341.1 para-aminobenzoate synthase, glutamine amidotransferase, component II 787252 pabA 12330647 pabA Staphylococcus aureus subsp. aureus str. JKD6008 para-aminobenzoate synthase, glutamine amidotransferase, component II YP_005744102.1 786659 D 546342 CDS YP_005744103.1 384861383 12330648 787236..788387 1 NC_017341.1 anthranilate synthase 788387 pabB 12330648 pabB Staphylococcus aureus subsp. aureus str. JKD6008 anthranilate synthase YP_005744103.1 787236 D 546342 CDS YP_005744104.1 384861384 12330649 788387..788995 1 NC_017341.1 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase-like protein 788995 pabC 12330649 pabC Staphylococcus aureus subsp. aureus str. JKD6008 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase-like protein YP_005744104.1 788387 D 546342 CDS YP_005744105.1 384861385 12330650 789355..790065 1 NC_017341.1 allophanate hydrolase subunit 1 790065 12330650 SAA6008_00732 Staphylococcus aureus subsp. aureus str. JKD6008 allophanate hydrolase subunit 1 YP_005744105.1 789355 D 546342 CDS YP_005744106.1 384861386 12330651 790049..791053 1 NC_017341.1 allophanate hydrolase subunit 2 791053 12330651 SAA6008_00733 Staphylococcus aureus subsp. aureus str. JKD6008 allophanate hydrolase subunit 2 YP_005744106.1 790049 D 546342 CDS YP_005744107.1 384861387 12330652 791527..793467 1 NC_017341.1 phosphoglycerol transferase I 793467 12330652 SAA6008_00734 Staphylococcus aureus subsp. aureus str. JKD6008 phosphoglycerol transferase I YP_005744107.1 791527 D 546342 CDS YP_005744108.1 384861388 12330653 793738..795621 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, ABC protein 795621 12330653 SAA6008_00735 Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, ABC protein YP_005744108.1 793738 D 546342 CDS YP_005744109.1 384861389 12330654 795633..797414 1 NC_017341.1 TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein SMART: DEAD-like helicases-like; ATP-dependent DNA helicase 797414 12330654 SAA6008_00736 Staphylococcus aureus subsp. aureus str. JKD6008 ATP-dependent DNA helicase YP_005744109.1 795633 D 546342 CDS YP_005744110.1 384861390 12330655 797636..798613 1 NC_017341.1 glycine/betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, ABC protein 798613 12330655 SAA6008_00737 Staphylococcus aureus subsp. aureus str. JKD6008 glycine/betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, ABC protein YP_005744110.1 797636 D 546342 CDS YP_005744111.1 384861391 12330656 798606..800120 1 NC_017341.1 PFAM: binding-protein-dependent transport systems inner membrane component; Substrate-binding region of ABC-type glycine betaine transport system KEGG: sao:SAOUHSC_00732 amino acid ABC transporter, permease protein, putative; ABC-type proline/glycine betaine transport systems, permease component 800120 12330656 SAA6008_00738 Staphylococcus aureus subsp. aureus str. JKD6008 ABC-type proline/glycine betaine transport systems, permease component YP_005744111.1 798606 D 546342 CDS YP_005744112.1 384861392 12330657 800360..801418 1 NC_017341.1 TIGRFAM: histidinol-phosphate aminotransferase PFAM: aminotransferase class I and II KEGG: sao:SAOUHSC_00733 histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase 801418 12330657 SAA6008_00739 Staphylococcus aureus subsp. aureus str. JKD6008 histidinol-phosphate aminotransferase YP_005744112.1 800360 D 546342 CDS YP_005744113.1 384861393 12330658 801769..802311 1 NC_017341.1 identified by similarity to EGAD:107442; match to protein family HMM PF06941; Putative 5'(3')-deoxyribonucleotidase 802311 12330658 SAA6008_00740 Staphylococcus aureus subsp. aureus str. JKD6008 Putative 5'(3')-deoxyribonucleotidase YP_005744113.1 801769 D 546342 CDS YP_005744114.1 384861394 12330659 complement(802991..803908) 1 NC_017341.1 identified by match to protein family HMM PF00781; match to protein family HMM TIGR00147; putative lipid kinase 803908 12330659 SAA6008_00741 Staphylococcus aureus subsp. aureus str. JKD6008 putative lipid kinase YP_005744114.1 802991 R 546342 CDS YP_005744115.1 384861395 12330660 complement(804178..805683) 1 NC_017341.1 POT family proton (H+)-dependent oligopeptide transporter 805683 12330660 SAA6008_00742 Staphylococcus aureus subsp. aureus str. JKD6008 POT family proton (H+)-dependent oligopeptide transporter YP_005744115.1 804178 R 546342 CDS YP_005744116.1 384861396 12330661 complement(806024..806524) 1 NC_017341.1 NADPH-dependent 7-cyano-7-deazaguanine reductase 806524 folE 12330661 folE Staphylococcus aureus subsp. aureus str. JKD6008 NADPH-dependent 7-cyano-7-deazaguanine reductase YP_005744116.1 806024 R 546342 CDS YP_005744117.1 384861397 12330662 complement(806544..807410) 1 NC_017341.1 hypothetical protein 807410 12330662 SAA6008_00744 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744117.1 806544 R 546342 CDS YP_005744118.1 384861398 12330663 808190..808609 1 NC_017341.1 NrdI protein involved in ribonucleotide reductase function 808609 nrdI 12330663 nrdI Staphylococcus aureus subsp. aureus str. JKD6008 NrdI protein involved in ribonucleotide reductase function YP_005744118.1 808190 D 546342 CDS YP_005744119.1 384861399 12330664 808581..810677 1 NC_017341.1 ribonucleoside-diphosphate reductase subunit alpha 810677 nrdE 12330664 nrdE Staphylococcus aureus subsp. aureus str. JKD6008 ribonucleoside-diphosphate reductase subunit alpha YP_005744119.1 808581 D 546342 CDS YP_005744120.1 384861400 12330665 810795..811766 1 NC_017341.1 ribonucleoside-diphosphate reductase subunit beta 811766 nrdF 12330665 nrdF Staphylococcus aureus subsp. aureus str. JKD6008 ribonucleoside-diphosphate reductase subunit beta YP_005744120.1 810795 D 546342 CDS YP_005744121.1 384861401 12330666 812474..813487 1 NC_017341.1 iron (Fe+3) ABC superfamily ATP binding cassette transporter, membrane protein 813487 sstA 12330666 sstA Staphylococcus aureus subsp. aureus str. JKD6008 iron (Fe+3) ABC superfamily ATP binding cassette transporter, membrane protein YP_005744121.1 812474 D 546342 CDS YP_005744122.1 384861402 12330667 813498..814430 1 NC_017341.1 iron (Fe+3) ABC superfamily ATP binding cassette transporter, membrane protein 814430 sstB 12330667 sstB Staphylococcus aureus subsp. aureus str. JKD6008 iron (Fe+3) ABC superfamily ATP binding cassette transporter, membrane protein YP_005744122.1 813498 D 546342 CDS YP_005744123.1 384861403 12330668 814427..815188 1 NC_017341.1 iron (Fe+3) ABC superfamily ATP binding cassette transporter, ABC protein 815188 sstC 12330668 sstC Staphylococcus aureus subsp. aureus str. JKD6008 iron (Fe+3) ABC superfamily ATP binding cassette transporter, ABC protein YP_005744123.1 814427 D 546342 CDS YP_005744124.1 384861404 12330669 815307..816335 1 NC_017341.1 lipoprotein, similar to ferrichrome ABC transporter; ABC-type siderophore binding protein 816335 12330669 SAA6008_00751 Staphylococcus aureus subsp. aureus str. JKD6008 ABC-type siderophore binding protein YP_005744124.1 815307 D 546342 CDS YP_005744125.1 384861405 12330670 complement(816984..817907) 1 NC_017341.1 putative UDP-N-acetylenolpyruvoylglucosamine reductase 817907 murB 12330670 murB Staphylococcus aureus subsp. aureus str. JKD6008 putative UDP-N-acetylenolpyruvoylglucosamine reductase YP_005744125.1 816984 R 546342 CDS YP_005744126.1 384861406 12330671 complement(818034..818552) 1 NC_017341.1 hypothetical protein 818552 12330671 SAA6008_00753 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744126.1 818034 R 546342 CDS YP_005744127.1 384861407 12330672 818672..819550 1 NC_017341.1 hypothetical protein 819550 12330672 SAA6008_00754 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744127.1 818672 D 546342 CDS YP_005744128.1 384861408 12330673 complement(819660..820832) 1 NC_017341.1 transposase for IS256 820832 12330673 SAA6008_00755 Staphylococcus aureus subsp. aureus str. JKD6008 transposase for IS256 YP_005744128.1 819660 R 546342 CDS YP_005744129.1 384861409 12330674 821036..821356 1 NC_017341.1 hypothetical protein 821356 12330674 SAA6008_00756 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744129.1 821036 D 546342 CDS YP_005744130.1 384861410 12330675 821781..822905 1 NC_017341.1 glycerate kinase 822905 12330675 SAA6008_00757 Staphylococcus aureus subsp. aureus str. JKD6008 glycerate kinase YP_005744130.1 821781 D 546342 CDS YP_005744131.1 384861411 12330676 complement(823094..824320) 1 NC_017341.1 M20 family peptidase T 824320 pepT 12330676 pepT Staphylococcus aureus subsp. aureus str. JKD6008 M20 family peptidase T YP_005744131.1 823094 R 546342 CDS YP_005744132.1 384861412 12330677 complement(824334..824828) 1 NC_017341.1 hypothetical protein 824828 12330677 SAA6008_00759 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744132.1 824334 R 546342 CDS YP_005744133.1 384861413 12330678 complement(824846..825607) 1 NC_017341.1 hypothetical protein 825607 12330678 SAA6008_00760 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744133.1 824846 R 546342 CDS YP_005744134.1 384861414 12330679 complement(825803..826873) 1 NC_017341.1 diguanylate cyclase GGDEF domain protein 826873 12330679 SAA6008_00761 Staphylococcus aureus subsp. aureus str. JKD6008 diguanylate cyclase GGDEF domain protein YP_005744134.1 825803 R 546342 CDS YP_005744135.1 384861415 12330680 827191..828246 1 NC_017341.1 PFAM: glycosyl transferase family 4 KEGG: sav:SAV0747 lipophilic protein affecting bacterial lysis rate and methicillin resistance level; glycosyl transferase family protein 828246 12330680 SAA6008_00762 Staphylococcus aureus subsp. aureus str. JKD6008 glycosyl transferase family protein YP_005744135.1 827191 D 546342 CDS YP_005744136.1 384861416 12330681 complement(828416..829057) 1 NC_017341.1 hypothetical protein 829057 12330681 SAA6008_00763 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744136.1 828416 R 546342 CDS YP_005744137.1 384861417 12330682 829201..830067 1 NC_017341.1 identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762; Conserved hypothetical DegV family protein 830067 12330682 SAA6008_00764 Staphylococcus aureus subsp. aureus str. JKD6008 Conserved hypothetical DegV family protein YP_005744137.1 829201 D 546342 CDS YP_005744138.1 384861418 12330683 830431..831513 1 NC_017341.1 superfamily II DNA/RNA helicase ComFA 831513 12330683 SAA6008_00765 Staphylococcus aureus subsp. aureus str. JKD6008 superfamily II DNA/RNA helicase ComFA YP_005744138.1 830431 D 546342 CDS YP_005744139.1 384861419 12330684 831506..832180 1 NC_017341.1 putative amidophosphoribosyltransferase, ComFC 832180 comFC 12330684 comFC Staphylococcus aureus subsp. aureus str. JKD6008 putative amidophosphoribosyltransferase, ComFC YP_005744139.1 831506 D 546342 CDS YP_005744140.1 384861420 12330685 832241..832813 1 NC_017341.1 sigma 54 modulation protein/ribosomal protein S30EA 832813 yfiA 12330685 yfiA Staphylococcus aureus subsp. aureus str. JKD6008 sigma 54 modulation protein/ribosomal protein S30EA YP_005744140.1 832241 D 546342 CDS YP_005744141.1 384861421 12330686 833227..835758 1 NC_017341.1 Sec family Type I general secretory pathway preprotein translocase subunit SecA 835758 secA 12330686 secA Staphylococcus aureus subsp. aureus str. JKD6008 Sec family Type I general secretory pathway preprotein translocase subunit SecA YP_005744141.1 833227 D 546342 CDS YP_005744142.1 384861422 12330687 836188..837183 1 NC_017341.1 peptide chain release factor 2 837183 12330687 SAA6008_00769 Staphylococcus aureus subsp. aureus str. JKD6008 peptide chain release factor 2 YP_005744142.1 836188 D 546342 CDS YP_005744143.1 384861423 12330688 837625..838431 1 NC_017341.1 Some domain similarity with CHAP and PRK08581 (amidase) and, lysM (lysin motif).; peptidoglycan hydrolysis related protein 838431 12330688 SAA6008_00770 Staphylococcus aureus subsp. aureus str. JKD6008 peptidoglycan hydrolysis related protein YP_005744143.1 837625 D 546342 CDS YP_005744144.1 384861424 12330689 838605..839255 1 NC_017341.1 putative HD-family metal-dependent phosphohydrolase 839255 12330689 SAA6008_00771 Staphylococcus aureus subsp. aureus str. JKD6008 putative HD-family metal-dependent phosphohydrolase YP_005744144.1 838605 D 546342 CDS YP_005744145.1 384861425 12330690 839291..839488 1 NC_017341.1 hypothetical protein 839488 12330690 SAA6008_00772 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744145.1 839291 D 546342 CDS YP_005744146.1 384861426 12330691 839757..841742 1 NC_017341.1 excision endonuclease subunit UvrB 841742 uvrB 12330691 uvrB Staphylococcus aureus subsp. aureus str. JKD6008 excision endonuclease subunit UvrB YP_005744146.1 839757 D 546342 CDS YP_005744147.1 384861427 12330692 841750..844596 1 NC_017341.1 excision endonuclease subunit UvrA 844596 uvrA 12330692 uvrA Staphylococcus aureus subsp. aureus str. JKD6008 excision endonuclease subunit UvrA YP_005744147.1 841750 D 546342 CDS YP_005744148.1 384861428 12330693 845258..846190 1 NC_017341.1 HPr(Ser) kinase/phosphatase 846190 hprK 12330693 hprK Staphylococcus aureus subsp. aureus str. JKD6008 HPr(Ser) kinase/phosphatase YP_005744148.1 845258 D 546342 CDS YP_005744149.1 384861429 12330694 846196..847035 1 NC_017341.1 prolipoprotein diacylglyceryl transferase 847035 lgt 12330694 lgt Staphylococcus aureus subsp. aureus str. JKD6008 prolipoprotein diacylglyceryl transferase YP_005744149.1 846196 D 546342 CDS YP_005744150.1 384861430 12330695 847043..847528 1 NC_017341.1 putative acetyltransferase 847528 12330695 SAA6008_00777 Staphylococcus aureus subsp. aureus str. JKD6008 putative acetyltransferase YP_005744150.1 847043 D 546342 CDS YP_005744151.1 384861431 12330696 847536..848975 1 NC_017341.1 hypothetical protein 848975 12330696 SAA6008_00778 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744151.1 847536 D 546342 CDS YP_005744152.1 384861432 12330697 849042..849977 1 NC_017341.1 thioredoxin-disulfide reductase 849977 trxB 12330697 trxB Staphylococcus aureus subsp. aureus str. JKD6008 thioredoxin-disulfide reductase YP_005744152.1 849042 D 546342 CDS YP_005744153.1 384861433 12330698 850799..851710 1 NC_017341.1 putative P-loop ATPase/kinase 851710 12330698 SAA6008_00780 Staphylococcus aureus subsp. aureus str. JKD6008 putative P-loop ATPase/kinase YP_005744153.1 850799 D 546342 CDS YP_005744154.1 384861434 12330699 851707..852702 1 NC_017341.1 2-phospho-L-lactate transferase (CofD) related protein; hypothetical protein 852702 12330699 SAA6008_00781 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744154.1 851707 D 546342 CDS YP_005744155.1 384861435 12330700 852812..853756 1 NC_017341.1 sporulation regulator WhiA 853756 whiA 12330700 whiA Staphylococcus aureus subsp. aureus str. JKD6008 sporulation regulator WhiA YP_005744155.1 852812 D 546342 CDS YP_005744156.1 384861436 12330702 854329..854916 1 NC_017341.1 ATP-dependent Clp protease proteolytic subunit 854916 clpP 12330702 clpP Staphylococcus aureus subsp. aureus str. JKD6008 ATP-dependent Clp protease proteolytic subunit YP_005744156.1 854329 D 546342 CDS YP_005744157.1 384861437 12330703 complement(855159..856061) 1 NC_017341.1 NAD dependent epimerase/dehydratase familyprotein 856061 12330703 SAA6008_00784 Staphylococcus aureus subsp. aureus str. JKD6008 NAD dependent epimerase/dehydratase familyprotein YP_005744157.1 855159 R 546342 CDS YP_005744158.1 384861438 12330704 856764..857393 1 NC_017341.1 hypothetical protein 857393 12330704 SAA6008_00785 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744158.1 856764 D 546342 CDS YP_005744159.1 384861439 12330705 858036..859049 1 NC_017341.1 DeoR family transcriptional regulator 859049 12330705 SAA6008_00786 Staphylococcus aureus subsp. aureus str. JKD6008 DeoR family transcriptional regulator YP_005744159.1 858036 D 546342 CDS YP_005744160.1 384861440 12330706 859102..860112 1 NC_017341.1 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) 860112 gap 12330706 gap Staphylococcus aureus subsp. aureus str. JKD6008 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) YP_005744160.1 859102 D 546342 CDS YP_005744161.1 384861441 12330707 860251..861441 1 NC_017341.1 phosphoglycerate kinase 861441 pgk 12330707 pgk Staphylococcus aureus subsp. aureus str. JKD6008 phosphoglycerate kinase YP_005744161.1 860251 D 546342 CDS YP_005744162.1 384861442 12330708 861473..862324 1 NC_017341.1 triose-phosphate isomerase 862324 tpi 12330708 tpi Staphylococcus aureus subsp. aureus str. JKD6008 triose-phosphate isomerase YP_005744162.1 861473 D 546342 CDS YP_005744163.1 384861443 12330709 862327..863844 1 NC_017341.1 putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 863844 pgm 12330709 pgm Staphylococcus aureus subsp. aureus str. JKD6008 putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase YP_005744163.1 862327 D 546342 CDS YP_005744164.1 384861444 12330710 863974..865278 1 NC_017341.1 enolase (2-phosphoglycerate dehydrogenase) 865278 eno 12330710 eno Staphylococcus aureus subsp. aureus str. JKD6008 enolase (2-phosphoglycerate dehydrogenase) YP_005744164.1 863974 D 546342 CDS YP_005744165.1 384861445 12330711 865618..866076 1 NC_017341.1 hypothetical protein 866076 12330711 SAA6008_00792 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744165.1 865618 D 546342 CDS YP_005744166.1 384861446 12330712 866143..866376 1 NC_017341.1 SecG forms a complex with SecY and SecE. SecA then recruits the SecYEG complex to form an active protein translocation channel.; preprotein translocase subunit SecG 866376 secG 12330712 secG Staphylococcus aureus subsp. aureus str. JKD6008 preprotein translocase subunit SecG YP_005744166.1 866143 D 546342 CDS YP_005744167.1 384861447 12330713 866492..867232 1 NC_017341.1 carboxyesterase -like protein 867232 est 12330713 est Staphylococcus aureus subsp. aureus str. JKD6008 carboxyesterase -like protein YP_005744167.1 866492 D 546342 CDS YP_005744168.1 384861448 12330714 867266..869638 1 NC_017341.1 exoribonuclease, VacB/RNase II family 869638 rnr 12330714 rnr Staphylococcus aureus subsp. aureus str. JKD6008 exoribonuclease, VacB/RNase II family YP_005744168.1 867266 D 546342 CDS YP_005744169.1 384861449 12330715 869660..870124 1 NC_017341.1 putative tmRNA-binding protein 870124 smpB 12330715 smpB Staphylococcus aureus subsp. aureus str. JKD6008 putative tmRNA-binding protein YP_005744169.1 869660 D 546342 CDS YP_005744170.1 384861450 12330716 complement(871446..871769) 1 NC_017341.1 conserved cytoplasmic protein 871769 12330716 SAA6008_00797 Staphylococcus aureus subsp. aureus str. JKD6008 conserved cytoplasmic protein YP_005744170.1 871446 R 546342 CDS YP_005744171.1 384861451 12330717 complement(871785..871931) 1 NC_017341.1 hypothetical protein 871931 12330717 SAA6008_00798 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744171.1 871785 R 546342 CDS YP_005744172.1 384861452 12330719 873449..873970 1 NC_017341.1 hypothetical protein 873970 12330719 SAA6008_00801 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744172.1 873449 D 546342 CDS YP_005744173.1 384861453 12330720 874109..874639 1 NC_017341.1 N-acetyltransferase GCN5 874639 12330720 SAA6008_00802 Staphylococcus aureus subsp. aureus str. JKD6008 N-acetyltransferase GCN5 YP_005744173.1 874109 D 546342 CDS YP_005744174.1 384861454 12330721 874908..877703 1 NC_017341.1 fibrinogen-binding protein 877703 12330721 SAA6008_00803 Staphylococcus aureus subsp. aureus str. JKD6008 fibrinogen-binding protein YP_005744174.1 874908 D 546342 CDS YP_005744175.1 384861455 12330722 877924..879450 1 NC_017341.1 von Willebrand factor-binding protein 879450 12330722 SAA6008_00804 Staphylococcus aureus subsp. aureus str. JKD6008 von Willebrand factor-binding protein YP_005744175.1 877924 D 546342 CDS YP_005744176.1 384861456 12330723 879801..880823 1 NC_017341.1 secretory extracellular matrix and plasma binding protein 880823 ssp 12330723 ssp Staphylococcus aureus subsp. aureus str. JKD6008 secretory extracellular matrix and plasma binding protein YP_005744176.1 879801 D 546342 CDS YP_005744177.1 384861457 12330724 881158..881628 1 NC_017341.1 KEGG: sav:SAV0814 hypothetical protein; anaerobic ribonucleoside-triphosphate reductase activating protein 881628 12330724 SAA6008_00806 Staphylococcus aureus subsp. aureus str. JKD6008 anaerobic ribonucleoside-triphosphate reductase activating protein YP_005744177.1 881158 D 546342 CDS YP_005744178.1 384861458 12330725 881969..882655 1 NC_017341.1 PFAM: nuclease (SNase domain protein); staphylococcal thermonuclease precursor 882655 12330725 SAA6008_00807 Staphylococcus aureus subsp. aureus str. JKD6008 staphylococcal thermonuclease precursor YP_005744178.1 881969 D 546342 CDS YP_005744179.1 384861459 12330726 883012..883212 1 NC_017341.1 identified by match to protein family HMM PF00313; cold-shock DNA-binding domain protein, CspC 883212 cspC 12330726 cspC Staphylococcus aureus subsp. aureus str. JKD6008 cold-shock DNA-binding domain protein, CspC YP_005744179.1 883012 D 546342 CDS YP_005744180.1 384861460 12330727 complement(883708..883926) 1 NC_017341.1 hypothetical protein 883926 12330727 SAA6008_00809 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744180.1 883708 R 546342 CDS YP_005744181.1 384861461 12330728 complement(883988..884272) 1 NC_017341.1 hypothetical protein 884272 12330728 SAA6008_00810 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744181.1 883988 R 546342 CDS YP_005744182.1 384861462 12330729 complement(884360..884929) 1 NC_017341.1 hypothetical protein 884929 12330729 SAA6008_00811 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744182.1 884360 R 546342 CDS YP_005744183.1 384861463 12330730 complement(885117..885305) 1 NC_017341.1 hypothetical protein 885305 12330730 SAA6008_00812 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744183.1 885117 R 546342 CDS YP_005744184.1 384861464 12330731 885935..886138 1 NC_017341.1 hypothetical protein 886138 12330731 SAA6008_00813 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744184.1 885935 D 546342 CDS YP_005744185.1 384861465 12330732 complement(886135..886371) 1 NC_017341.1 hypothetical protein 886371 12330732 SAA6008_00814 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744185.1 886135 R 546342 CDS YP_005744186.1 384861466 12330733 886617..887177 1 NC_017341.1 phosphoglycerate mutase family protein 887177 gpmA1 12330733 gpmA1 Staphylococcus aureus subsp. aureus str. JKD6008 phosphoglycerate mutase family protein YP_005744186.1 886617 D 546342 CDS YP_005744187.1 384861467 12330734 complement(887250..887867) 1 NC_017341.1 putative LysE type translocator protein 887867 12330734 SAA6008_00816 Staphylococcus aureus subsp. aureus str. JKD6008 putative LysE type translocator protein YP_005744187.1 887250 R 546342 CDS YP_005744188.1 384861468 12330735 complement(888022..888516) 1 NC_017341.1 hypothetical protein 888516 12330735 SAA6008_00817 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744188.1 888022 R 546342 CDS YP_005744189.1 384861469 12330736 complement(888915..889337) 1 NC_017341.1 osmotically inducible protein OsmC 889337 osmC 12330736 osmC Staphylococcus aureus subsp. aureus str. JKD6008 osmotically inducible protein OsmC YP_005744189.1 888915 R 546342 CDS YP_005744190.1 384861470 12330737 889485..890201 1 NC_017341.1 3-dehydroquinate dehydratase 890201 aroD 12330737 aroD Staphylococcus aureus subsp. aureus str. JKD6008 3-dehydroquinate dehydratase YP_005744190.1 889485 D 546342 CDS YP_005744191.1 384861471 12330738 890284..890823 1 NC_017341.1 nitroreductase family protein 890823 12330738 SAA6008_00820 Staphylococcus aureus subsp. aureus str. JKD6008 nitroreductase family protein YP_005744191.1 890284 D 546342 CDS YP_005744192.1 384861472 12330739 complement(890973..891293) 1 NC_017341.1 thioredoxin 891293 12330739 SAA6008_00821 Staphylococcus aureus subsp. aureus str. JKD6008 thioredoxin YP_005744192.1 890973 R 546342 CDS YP_005744193.1 384861473 12330740 891437..891793 1 NC_017341.1 putative arsenate Reductase (ArsC) family protein 891793 arsC1 12330740 arsC1 Staphylococcus aureus subsp. aureus str. JKD6008 putative arsenate Reductase (ArsC) family protein YP_005744193.1 891437 D 546342 CDS YP_005744194.1 384861474 12330741 891951..892331 1 NC_017341.1 glycine cleavage system H protein 892331 gcvH 12330741 gcvH Staphylococcus aureus subsp. aureus str. JKD6008 glycine cleavage system H protein YP_005744194.1 891951 D 546342 CDS YP_005744195.1 384861475 12330742 892395..892508 1 NC_017341.1 hypothetical protein 892508 12330742 SAA6008_00824 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744195.1 892395 D 546342 CDS YP_005744196.1 384861476 12330743 892510..893130 1 NC_017341.1 hypothetical protein 893130 12330743 SAA6008_00825 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744196.1 892510 D 546342 CDS YP_005744197.1 384861477 12330744 893232..894317 1 NC_017341.1 phage integrase 894317 12330744 SAA6008_00826 Staphylococcus aureus subsp. aureus str. JKD6008 phage integrase YP_005744197.1 893232 D 546342 CDS YP_005744198.1 384861478 12330745 894314..896206 1 NC_017341.1 transposition regulatory protein TnpB 896206 tnpB 12330745 tnpB Staphylococcus aureus subsp. aureus str. JKD6008 transposition regulatory protein TnpB YP_005744198.1 894314 D 546342 CDS YP_005744199.1 384861479 12330746 896213..896590 1 NC_017341.1 KEGG: ser:SERP2508 transposase C; transposition regulatory protein TnpC_3 896590 tnpC_3 12330746 tnpC_3 Staphylococcus aureus subsp. aureus str. JKD6008 transposition regulatory protein TnpC_3 YP_005744199.1 896213 D 546342 CDS YP_005744200.1 384861480 12330747 896741..897523 1 NC_017341.1 aminoglycoside resistance protein 897523 12330747 SAA6008_00829 Staphylococcus aureus subsp. aureus str. JKD6008 aminoglycoside resistance protein YP_005744200.1 896741 D 546342 CDS YP_005744201.1 384861481 12330748 complement(897649..898380) 1 NC_017341.1 PFAM: ribosomal RNA adenine methylase transferase; putative methyltransferase KEGG: ser:SERP2510 rRNA adenine N-6-methyltransferase; rRNA adenine N-6-methyltransferase, ErmA 898380 ermA 12330748 ermA Staphylococcus aureus subsp. aureus str. JKD6008 rRNA adenine N-6-methyltransferase, ErmA YP_005744201.1 897649 R 546342 CDS YP_005744202.1 384861482 12330749 898889..899551 1 NC_017341.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; methylase 899551 12330749 SAA6008_00831 Staphylococcus aureus subsp. aureus str. JKD6008 methylase YP_005744202.1 898889 D 546342 CDS YP_005744203.1 384861483 12330750 899788..900075 1 NC_017341.1 hypothetical protein 900075 12330750 SAA6008_00832 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744203.1 899788 D 546342 CDS YP_005744204.1 384861484 12330751 900811..901203 1 NC_017341.1 putative small primase-like protein (Toprim domain) 901203 12330751 SAA6008_00833 Staphylococcus aureus subsp. aureus str. JKD6008 putative small primase-like protein (Toprim domain) YP_005744204.1 900811 D 546342 CDS YP_005744205.1 384861485 12330752 901196..901492 1 NC_017341.1 thioredoxin 901492 12330752 SAA6008_00834 Staphylococcus aureus subsp. aureus str. JKD6008 thioredoxin YP_005744205.1 901196 D 546342 CDS YP_005744206.1 384861486 12330753 901742..902767 1 NC_017341.1 identified by match to protein family HMM PF00005; DL-methionine transporter ATP-binding subunit 902767 12330753 SAA6008_00835 Staphylococcus aureus subsp. aureus str. JKD6008 DL-methionine transporter ATP-binding subunit YP_005744206.1 901742 D 546342 CDS YP_005744207.1 384861487 12330754 902760..903455 1 NC_017341.1 binding-protein-dependent transport system inner membrane protein 903455 12330754 SAA6008_00836 Staphylococcus aureus subsp. aureus str. JKD6008 binding-protein-dependent transport system inner membrane protein YP_005744207.1 902760 D 546342 CDS YP_005744208.1 384861488 12330755 903473..904294 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, binding protein 904294 12330755 SAA6008_00837 Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, binding protein YP_005744208.1 903473 D 546342 CDS YP_005744209.1 384861489 12330756 complement(904438..905658) 1 NC_017341.1 pathogenicity island protein, integrase 905658 int 12330756 int Staphylococcus aureus subsp. aureus str. JKD6008 pathogenicity island protein, integrase YP_005744209.1 904438 R 546342 CDS YP_005744210.1 384861490 12330757 complement(905746..906474) 1 NC_017341.1 extracellular enterotoxin type I 906474 sei 12330757 sei Staphylococcus aureus subsp. aureus str. JKD6008 extracellular enterotoxin type I YP_005744210.1 905746 R 546342 CDS YP_005744211.1 384861491 12330758 complement(906498..907226) 1 NC_017341.1 staphylococcal enterotoxin type I 907226 sem 12330758 sem Staphylococcus aureus subsp. aureus str. JKD6008 staphylococcal enterotoxin type I YP_005744211.1 906498 R 546342 CDS YP_005744212.1 384861492 12330759 complement(907401..908135) 1 NC_017341.1 Helix-turn-helix XRE-family like protein 908135 12330759 SAA6008_00841 Staphylococcus aureus subsp. aureus str. JKD6008 Helix-turn-helix XRE-family like protein YP_005744212.1 907401 R 546342 CDS YP_005744213.1 384861493 12330760 908381..908497 1 NC_017341.1 Similar to SaPI1 Orf21; hypothetical protein 908497 12330760 SAA6008_00842 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744213.1 908381 D 546342 CDS YP_005744214.1 384861494 12330761 908498..908770 1 NC_017341.1 pathogenicity island DNA-binding protein 908770 12330761 SAA6008_00843 Staphylococcus aureus subsp. aureus str. JKD6008 pathogenicity island DNA-binding protein YP_005744214.1 908498 D 546342 CDS YP_005744215.1 384861495 12330762 908761..908928 1 NC_017341.1 hypothetical bovine pathogenicity island protein 908928 12330762 SAA6008_00844 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical bovine pathogenicity island protein YP_005744215.1 908761 D 546342 CDS YP_005744216.1 384861496 12330763 908921..909130 1 NC_017341.1 pathogenicity island protein 909130 12330763 SAA6008_00845 Staphylococcus aureus subsp. aureus str. JKD6008 pathogenicity island protein YP_005744216.1 908921 D 546342 CDS YP_005744217.1 384861497 12330764 909133..909426 1 NC_017341.1 hypothetical mobile element-associated protein 909426 12330764 SAA6008_00846 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical mobile element-associated protein YP_005744217.1 909133 D 546342 CDS YP_005744218.1 384861498 12330765 909514..910383 1 NC_017341.1 putative phage primase 910383 12330765 SAA6008_00847 Staphylococcus aureus subsp. aureus str. JKD6008 putative phage primase YP_005744218.1 909514 D 546342 CDS YP_005744219.1 384861499 12330766 910400..911857 1 NC_017341.1 pathogenicity island protein 911857 12330766 SAA6008_00848 Staphylococcus aureus subsp. aureus str. JKD6008 pathogenicity island protein YP_005744219.1 910400 D 546342 CDS YP_005744220.1 384861500 12330767 912159..912521 1 NC_017341.1 pathogenicity island protein 912521 12330767 SAA6008_00849 Staphylococcus aureus subsp. aureus str. JKD6008 pathogenicity island protein YP_005744220.1 912159 D 546342 CDS YP_005744221.1 384861501 12330768 912523..912807 1 NC_017341.1 hypothetical protein 912807 12330768 SAA6008_00850 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744221.1 912523 D 546342 CDS YP_005744222.1 384861502 12330769 912804..913445 1 NC_017341.1 phage protein 913445 12330769 SAA6008_00851 Staphylococcus aureus subsp. aureus str. JKD6008 phage protein YP_005744222.1 912804 D 546342 CDS YP_005744223.1 384861503 12330771 914246..914824 1 NC_017341.1 hypothetical mobile element-associated protein 914824 12330771 SAA6008_00853 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical mobile element-associated protein YP_005744223.1 914246 D 546342 CDS YP_005744224.1 384861504 12330772 914818..915060 1 NC_017341.1 hypothetical mobile element-associated protein 915060 12330772 SAA6008_00854 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical mobile element-associated protein YP_005744224.1 914818 D 546342 CDS YP_005744225.1 384861505 12330773 915111..915638 1 NC_017341.1 spore coat protein 915638 12330773 SAA6008_00855 Staphylococcus aureus subsp. aureus str. JKD6008 spore coat protein YP_005744225.1 915111 D 546342 CDS YP_005744226.1 384861506 12330774 915641..915982 1 NC_017341.1 hypothetical protein 915982 12330774 SAA6008_00856 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744226.1 915641 D 546342 CDS YP_005744227.1 384861507 12330775 915979..916548 1 NC_017341.1 bacteriophage terminase small subunit 916548 12330775 SAA6008_00857 Staphylococcus aureus subsp. aureus str. JKD6008 bacteriophage terminase small subunit YP_005744227.1 915979 D 546342 CDS YP_005744228.1 384861508 12330777 917522..917920 1 NC_017341.1 pathogenicity island protein 917920 12330777 SAA6008_00860 Staphylococcus aureus subsp. aureus str. JKD6008 pathogenicity island protein YP_005744228.1 917522 D 546342 CDS YP_005744229.1 384861509 12330778 917907..918686 1 NC_017341.1 pathogenicity island protein 918686 12330778 SAA6008_00861 Staphylococcus aureus subsp. aureus str. JKD6008 pathogenicity island protein YP_005744229.1 917907 D 546342 CDS YP_005744230.1 384861510 12330779 919209..919403 1 NC_017341.1 putative CsbD family general stress response protein 919403 12330779 SAA6008_00862 Staphylococcus aureus subsp. aureus str. JKD6008 putative CsbD family general stress response protein YP_005744230.1 919209 D 546342 CDS YP_005744231.1 384861511 12330780 complement(919636..920487) 1 NC_017341.1 PFAM: protein of unknown function DUF368 KEGG: sav:SAV0841 similar to integral membrane protein; integral membrane protein 920487 12330780 SAA6008_00863 Staphylococcus aureus subsp. aureus str. JKD6008 integral membrane protein YP_005744231.1 919636 R 546342 CDS YP_005744232.1 384861512 12330781 920815..921576 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, ABC protein 921576 sufC 12330781 sufC Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, ABC protein YP_005744232.1 920815 D 546342 CDS YP_005744233.1 384861513 12330782 921674..922981 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, membrane protein 922981 sufD 12330782 sufD Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, membrane protein YP_005744233.1 921674 D 546342 CDS YP_005744234.1 384861514 12330783 923087..924337 1 NC_017341.1 cysteine desulfurase, SufS subfamily 924337 sufS 12330783 sufS Staphylococcus aureus subsp. aureus str. JKD6008 cysteine desulfurase, SufS subfamily YP_005744234.1 923087 D 546342 CDS YP_005744235.1 384861515 12330784 924327..924791 1 NC_017341.1 SUF system FeS assembly protein 924791 iscU 12330784 iscU Staphylococcus aureus subsp. aureus str. JKD6008 SUF system FeS assembly protein YP_005744235.1 924327 D 546342 CDS YP_005744236.1 384861516 12330785 924942..926339 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, membrane protein 926339 sufB 12330785 sufB Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, membrane protein YP_005744236.1 924942 D 546342 CDS YP_005744237.1 384861517 12330786 926529..926663 1 NC_017341.1 hypothetical protein 926663 12330786 SAA6008_00869 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744237.1 926529 D 546342 CDS YP_005744238.1 384861518 12330787 complement(926669..926791) 1 NC_017341.1 hypothetical protein 926791 12330787 SAA6008_00870 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744238.1 926669 R 546342 CDS YP_005744239.1 384861519 12330788 927348..928388 1 NC_017341.1 putative Mg2+ and Co2+ transporter, CorB 928388 12330788 SAA6008_00871 Staphylococcus aureus subsp. aureus str. JKD6008 putative Mg2+ and Co2+ transporter, CorB YP_005744239.1 927348 D 546342 CDS YP_005744240.1 384861520 12330789 928402..929469 1 NC_017341.1 2-nitropropane dioxygenase 929469 12330789 SAA6008_00872 Staphylococcus aureus subsp. aureus str. JKD6008 2-nitropropane dioxygenase YP_005744240.1 928402 D 546342 CDS YP_005744241.1 384861521 12330790 929682..930530 1 NC_017341.1 hypothetical protein 930530 12330790 SAA6008_00873 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744241.1 929682 D 546342 CDS YP_005744242.1 384861522 12330791 930543..931370 1 NC_017341.1 identified by similarity to GP:10176077; match to protein family HMM PF01925; sulfite exporter TauE/SafE-like protein 931370 12330791 SAA6008_00874 Staphylococcus aureus subsp. aureus str. JKD6008 sulfite exporter TauE/SafE-like protein YP_005744242.1 930543 D 546342 CDS YP_005744243.1 384861523 12330792 931397..932716 1 NC_017341.1 bifunctional 5-nucleotidase/2,3-cyclic phosphodiesterase 932716 12330792 SAA6008_00875 Staphylococcus aureus subsp. aureus str. JKD6008 bifunctional 5-nucleotidase/2,3-cyclic phosphodiesterase YP_005744243.1 931397 D 546342 CDS YP_005744244.1 384861524 12330793 932800..933717 1 NC_017341.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; Lipoyl synthase, LipA 933717 lipA 12330793 lipA Staphylococcus aureus subsp. aureus str. JKD6008 Lipoyl synthase, LipA YP_005744244.1 932800 D 546342 CDS YP_005744245.1 384861525 12330794 933847..934230 1 NC_017341.1 hypothetical protein 934230 12330794 SAA6008_00877 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744245.1 933847 D 546342 CDS YP_005744246.1 384861526 12330795 complement(934309..934575) 1 NC_017341.1 hypothetical protein 934575 12330795 SAA6008_00878 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744246.1 934309 R 546342 CDS YP_005744247.1 384861527 12330796 934673..935107 1 NC_017341.1 hypothetical protein 935107 12330796 SAA6008_00879 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744247.1 934673 D 546342 CDS YP_005744248.1 384861528 12330797 935107..935886 1 NC_017341.1 HAD-superfamily hydrolase 935886 12330797 SAA6008_00880 Staphylococcus aureus subsp. aureus str. JKD6008 HAD-superfamily hydrolase YP_005744248.1 935107 D 546342 CDS YP_005744249.1 384861529 12330798 935919..936878 1 NC_017341.1 glyoxylate reductase 936878 12330798 SAA6008_00881 Staphylococcus aureus subsp. aureus str. JKD6008 glyoxylate reductase YP_005744249.1 935919 D 546342 CDS YP_005744250.1 384861530 12330799 937290..937442 1 NC_017341.1 hypothetical protein 937442 12330799 SAA6008_00882 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744250.1 937290 D 546342 CDS YP_005744251.1 384861531 12330800 937458..938915 1 NC_017341.1 D-alanine-activating enzyme/D-alanine-D-alanyl, dltA protein 938915 dltA 12330800 dltA Staphylococcus aureus subsp. aureus str. JKD6008 D-alanine-activating enzyme/D-alanine-D-alanyl, dltA protein YP_005744251.1 937458 D 546342 CDS YP_005744252.1 384861532 12330801 938912..940126 1 NC_017341.1 D-alanine membrane transfer protein 940126 dltB 12330801 dltB Staphylococcus aureus subsp. aureus str. JKD6008 D-alanine membrane transfer protein YP_005744252.1 938912 D 546342 CDS YP_005744253.1 384861533 12330802 940144..940380 1 NC_017341.1 D-alanine-activating enzyme/D-alanine-D-alanyl, dltC protein 940380 dltC 12330802 dltC Staphylococcus aureus subsp. aureus str. JKD6008 D-alanine-activating enzyme/D-alanine-D-alanyl, dltC protein YP_005744253.1 940144 D 546342 CDS YP_005744254.1 384861534 12330803 940377..941552 1 NC_017341.1 D-alanine lipoteichoic acid and wall teichoic acid esterification secreted protein 941552 dltD 12330803 dltD Staphylococcus aureus subsp. aureus str. JKD6008 D-alanine lipoteichoic acid and wall teichoic acid esterification secreted protein YP_005744254.1 940377 D 546342 CDS YP_005744255.1 384861535 12330804 complement(941815..942057) 1 NC_017341.1 nitrogen-fixing NifU domain-containing protein 942057 12330804 SAA6008_00887 Staphylococcus aureus subsp. aureus str. JKD6008 nitrogen-fixing NifU domain-containing protein YP_005744255.1 941815 R 546342 CDS YP_005744256.1 384861536 12330805 942158..942481 1 NC_017341.1 hypothetical protein 942481 12330805 SAA6008_00888 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744256.1 942158 D 546342 CDS YP_005744257.1 384861537 12330806 complement(942540..943604) 1 NC_017341.1 pyridine nucleotide-disulfide oxidoreductase 943604 12330806 SAA6008_00889 Staphylococcus aureus subsp. aureus str. JKD6008 pyridine nucleotide-disulfide oxidoreductase YP_005744257.1 942540 R 546342 CDS YP_005744258.1 384861538 12330807 943954..944157 1 NC_017341.1 hypothetical protein 944157 12330807 SAA6008_00890 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744258.1 943954 D 546342 CDS YP_005744259.1 384861539 12330808 944170..944529 1 NC_017341.1 iron-sulfur cluster assembly accessory protein 944529 sufA 12330808 sufA Staphylococcus aureus subsp. aureus str. JKD6008 iron-sulfur cluster assembly accessory protein YP_005744259.1 944170 D 546342 CDS YP_005744260.1 384861540 12330809 944983..946191 1 NC_017341.1 pyridine nucleotide-disulfide oxidoreductase 946191 12330809 SAA6008_00892 Staphylococcus aureus subsp. aureus str. JKD6008 pyridine nucleotide-disulfide oxidoreductase YP_005744260.1 944983 D 546342 CDS YP_005744261.1 384861541 12330811 947064..948539 1 NC_017341.1 cytosol aminopeptidase 948539 ampA 12330811 ampA Staphylococcus aureus subsp. aureus str. JKD6008 cytosol aminopeptidase YP_005744261.1 947064 D 546342 CDS YP_005744262.1 384861542 12330812 948950..950266 1 NC_017341.1 NhaC family sodium:proton (Na+:H+) antiporter 950266 12330812 SAA6008_00896 Staphylococcus aureus subsp. aureus str. JKD6008 NhaC family sodium:proton (Na+:H+) antiporter YP_005744262.1 948950 D 546342 CDS YP_005744263.1 384861543 12330813 950285..950659 1 NC_017341.1 thioesterase superfamily protein 950659 12330813 SAA6008_00897 Staphylococcus aureus subsp. aureus str. JKD6008 thioesterase superfamily protein YP_005744263.1 950285 D 546342 CDS YP_005744264.1 384861544 12330814 complement(950715..951869) 1 NC_017341.1 pyridine nucleotide-disulfide oxidoreductase 951869 12330814 SAA6008_00898 Staphylococcus aureus subsp. aureus str. JKD6008 pyridine nucleotide-disulfide oxidoreductase YP_005744264.1 950715 R 546342 CDS YP_005744265.1 384861545 12330815 complement(952118..952474) 1 NC_017341.1 CPA3 family monovalent cation:proton (H+) antiporter-3 subunit G 952474 mnhG 12330815 mnhG Staphylococcus aureus subsp. aureus str. JKD6008 CPA3 family monovalent cation:proton (H+) antiporter-3 subunit G YP_005744265.1 952118 R 546342 CDS YP_005744266.1 384861546 12330816 complement(952452..952745) 1 NC_017341.1 CPA3 family monovalent cation:proton (H+) antiporter-3 subunit F 952745 mnhF 12330816 mnhF Staphylococcus aureus subsp. aureus str. JKD6008 CPA3 family monovalent cation:proton (H+) antiporter-3 subunit F YP_005744266.1 952452 R 546342 CDS YP_005744267.1 384861547 12330817 complement(952745..953224) 1 NC_017341.1 CPA3 family monovalent cation:proton (H+) antiporter-3 subunit E 953224 mnhE 12330817 mnhE Staphylococcus aureus subsp. aureus str. JKD6008 CPA3 family monovalent cation:proton (H+) antiporter-3 subunit E YP_005744267.1 952745 R 546342 CDS YP_005744268.1 384861548 12330818 complement(953226..954722) 1 NC_017341.1 CPA3 family monovalent cation:proton (H+) antiporter-3 subunit D 954722 mnhD 12330818 mnhD Staphylococcus aureus subsp. aureus str. JKD6008 CPA3 family monovalent cation:proton (H+) antiporter-3 subunit D YP_005744268.1 953226 R 546342 CDS YP_005744269.1 384861549 12330819 complement(954715..955056) 1 NC_017341.1 CPA3 family monovalent cation:proton (H+) antiporter-3 subunit C 955056 mnhC 12330819 mnhC Staphylococcus aureus subsp. aureus str. JKD6008 CPA3 family monovalent cation:proton (H+) antiporter-3 subunit C YP_005744269.1 954715 R 546342 CDS YP_005744270.1 384861550 12330820 complement(955056..955484) 1 NC_017341.1 CPA3 family monovalent cation:proton (H+) antiporter-3 subunit B 955484 mnhB 12330820 mnhB Staphylococcus aureus subsp. aureus str. JKD6008 CPA3 family monovalent cation:proton (H+) antiporter-3 subunit B YP_005744270.1 955056 R 546342 CDS YP_005744271.1 384861551 12330821 complement(955477..957882) 1 NC_017341.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation antiporter-3 subunit A, MnhA 957882 mnhA 12330821 mnhA Staphylococcus aureus subsp. aureus str. JKD6008 monovalent cation antiporter-3 subunit A, MnhA YP_005744271.1 955477 R 546342 CDS YP_005744272.1 384861552 12330822 complement(958013..958396) 1 NC_017341.1 kinase associated protein B 958396 kapB 12330822 kapB Staphylococcus aureus subsp. aureus str. JKD6008 kinase associated protein B YP_005744272.1 958013 R 546342 CDS YP_005744273.1 384861553 12330823 958460..959053 1 NC_017341.1 putative cyclophilin type peptidyl-prolyl cis-trans isomerase 959053 ppi 12330823 ppi Staphylococcus aureus subsp. aureus str. JKD6008 putative cyclophilin type peptidyl-prolyl cis-trans isomerase YP_005744273.1 958460 D 546342 CDS YP_005744274.1 384861554 12330824 959469..959846 1 NC_017341.1 S1 RNA-binding domain protein 959846 12330824 SAA6008_00908 Staphylococcus aureus subsp. aureus str. JKD6008 S1 RNA-binding domain protein YP_005744274.1 959469 D 546342 CDS YP_005744275.1 384861555 12330825 960208..961335 1 NC_017341.1 NADH:flavin oxidoreductase / NADH oxidase family protein 961335 12330825 SAA6008_00909 Staphylococcus aureus subsp. aureus str. JKD6008 NADH:flavin oxidoreductase / NADH oxidase family protein YP_005744275.1 960208 D 546342 CDS YP_005744276.1 384861556 12330826 961622..962833 1 NC_017341.1 ornithine--oxo-acid transaminase 962833 rocD 12330826 rocD Staphylococcus aureus subsp. aureus str. JKD6008 ornithine--oxo-acid transaminase YP_005744276.1 961622 D 546342 CDS YP_005744277.1 384861557 12330827 962900..964186 1 NC_017341.1 putative NAD-specific glutamate dehydrogenase 964186 gudB 12330827 gudB Staphylococcus aureus subsp. aureus str. JKD6008 putative NAD-specific glutamate dehydrogenase YP_005744277.1 962900 D 546342 CDS YP_005744278.1 384861558 12330828 complement(964633..965529) 1 NC_017341.1 PFAM: glycerophosphoryl diester phosphodiesterase KEGG: sao:SAOUHSC_00897 hypothetical protein; glycerophosphoryl diester phosphodiesterase 965529 glpQ 12330828 glpQ Staphylococcus aureus subsp. aureus str. JKD6008 glycerophosphoryl diester phosphodiesterase YP_005744278.1 964633 R 546342 CDS YP_005744279.1 384861559 12330829 complement(965804..967183) 1 NC_017341.1 putative argininosuccinate lyase 967183 argH 12330829 argH Staphylococcus aureus subsp. aureus str. JKD6008 putative argininosuccinate lyase YP_005744279.1 965804 R 546342 CDS YP_005744280.1 384861560 12330830 complement(967173..968378) 1 NC_017341.1 putative argininosuccinate synthase 968378 argG 12330830 argG Staphylococcus aureus subsp. aureus str. JKD6008 putative argininosuccinate synthase YP_005744280.1 967173 R 546342 CDS YP_005744281.1 384861561 12330831 968729..970060 1 NC_017341.1 glucose-6-phosphate isomerase 970060 pgi 12330831 pgi Staphylococcus aureus subsp. aureus str. JKD6008 glucose-6-phosphate isomerase YP_005744281.1 968729 D 546342 CDS YP_005744282.1 384861562 12330832 970385..970960 1 NC_017341.1 PFAM: SNARE associated Golgi protein; hypothetical protein 970960 12330832 SAA6008_00916 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744282.1 970385 D 546342 CDS YP_005744283.1 384861563 12330833 970965..971489 1 NC_017341.1 TIGRFAM: signal peptidase I PFAM: peptidase S24 S26A and S26B KEGG: sas:SAS0834 putative signal peptidase Ia; Sec family Type I general secretory pathway S26 family signal peptidase I, LepB 971489 lepB 12330833 lepB Staphylococcus aureus subsp. aureus str. JKD6008 Sec family Type I general secretory pathway S26 family signal peptidase I, LepB YP_005744283.1 970965 D 546342 CDS YP_005744284.1 384861564 12330834 971505..972080 1 NC_017341.1 TIGRFAM: signal peptidase I PFAM: peptidase S24 S26A and S26B KEGG: sas:SAS0835 signal peptidase Ib; Sec family Type I general secretory pathway S26 family signal peptidase I 972080 12330834 SAA6008_00918 Staphylococcus aureus subsp. aureus str. JKD6008 Sec family Type I general secretory pathway S26 family signal peptidase I YP_005744284.1 971505 D 546342 CDS YP_005744285.1 384861565 12330835 972240..975716 1 NC_017341.1 ATP-dependent nuclease subunit B 975716 addB 12330835 addB Staphylococcus aureus subsp. aureus str. JKD6008 ATP-dependent nuclease subunit B YP_005744285.1 972240 D 546342 CDS YP_005744286.1 384861566 12330836 975717..979370 1 NC_017341.1 ATP-dependent nuclease subunit A 979370 addA 12330836 addA Staphylococcus aureus subsp. aureus str. JKD6008 ATP-dependent nuclease subunit A YP_005744286.1 975717 D 546342 CDS YP_005744287.1 384861567 12330837 979536..980438 1 NC_017341.1 2-keto-4-pentenoate hydratase 980438 mhpD 12330837 mhpD Staphylococcus aureus subsp. aureus str. JKD6008 2-keto-4-pentenoate hydratase YP_005744287.1 979536 D 546342 CDS YP_005744288.1 384861568 12330838 980767..981156 1 NC_017341.1 hypothetical protein 981156 12330838 SAA6008_00922 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744288.1 980767 D 546342 CDS YP_005744289.1 384861569 12330839 complement(981327..982643) 1 NC_017341.1 coenzyme A disulfide reductase 982643 12330839 SAA6008_00923 Staphylococcus aureus subsp. aureus str. JKD6008 coenzyme A disulfide reductase YP_005744289.1 981327 R 546342 CDS YP_005744290.1 384861570 12330840 complement(982695..983519) 1 NC_017341.1 haloacid dehalogenase-like hydrolase 983519 12330840 SAA6008_00924 Staphylococcus aureus subsp. aureus str. JKD6008 haloacid dehalogenase-like hydrolase YP_005744290.1 982695 R 546342 CDS YP_005744291.1 384861571 12330841 983633..983941 1 NC_017341.1 putative metal-sulfur cluster biosynthetic enzyme, PaaD 983941 paaD 12330841 paaD Staphylococcus aureus subsp. aureus str. JKD6008 putative metal-sulfur cluster biosynthetic enzyme, PaaD YP_005744291.1 983633 D 546342 CDS YP_005744292.1 384861572 12330842 984488..986302 1 NC_017341.1 PFAM: acyltransferase 3 KEGG: sas:SAS0844 hypothetical protein; O-acetyltransferase 986302 12330842 SAA6008_00926 Staphylococcus aureus subsp. aureus str. JKD6008 O-acetyltransferase YP_005744292.1 984488 D 546342 CDS YP_005744293.1 384861573 12330843 986505..989114 1 NC_017341.1 PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein SMART: AAA ATPase KEGG: sav:SAV0975 ClpB chaperone homologue; ATPase subunit of an ATP-dependent protease, ClpB 989114 clpB 12330843 clpB Staphylococcus aureus subsp. aureus str. JKD6008 ATPase subunit of an ATP-dependent protease, ClpB YP_005744293.1 986505 D 546342 CDS YP_005744294.1 384861574 12330844 complement(989173..990042) 1 NC_017341.1 LysR family regulatory protein 990042 12330844 SAA6008_00928 Staphylococcus aureus subsp. aureus str. JKD6008 LysR family regulatory protein YP_005744294.1 989173 R 546342 CDS YP_005744295.1 384861575 12330845 990152..991297 1 NC_017341.1 isopropylmalate synthase-related protein 991297 leuA1 12330845 leuA1 Staphylococcus aureus subsp. aureus str. JKD6008 isopropylmalate synthase-related protein YP_005744295.1 990152 D 546342 CDS YP_005744296.1 384861576 12330847 991915..993033 1 NC_017341.1 major facilitator superfamily protein 993033 12330847 SAA6008_00932 Staphylococcus aureus subsp. aureus str. JKD6008 major facilitator superfamily protein YP_005744296.1 991915 D 546342 CDS YP_005744297.1 384861577 12330848 993017..993532 1 NC_017341.1 phosphatidylethanolamine-binding protein 993532 12330848 SAA6008_00933 Staphylococcus aureus subsp. aureus str. JKD6008 phosphatidylethanolamine-binding protein YP_005744297.1 993017 D 546342 CDS YP_005744298.1 384861578 12330849 993885..994277 1 NC_017341.1 extracellular adherence protein Eap 994277 eap 12330849 eap Staphylococcus aureus subsp. aureus str. JKD6008 extracellular adherence protein Eap YP_005744298.1 993885 D 546342 CDS YP_005744299.1 384861579 12330850 complement(994534..994719) 1 NC_017341.1 hypothetical protein 994719 12330850 SAA6008_00935 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744299.1 994534 R 546342 CDS YP_005744300.1 384861580 12330851 995014..995955 1 NC_017341.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters; 3-oxoacyl synthase III 995955 fabH 12330851 fabH Staphylococcus aureus subsp. aureus str. JKD6008 3-oxoacyl synthase III YP_005744300.1 995014 D 546342 CDS YP_005744301.1 384861581 12330852 995967..997211 1 NC_017341.1 3-oxoacyl-(acyl carrier protein) synthase II 997211 fabB 12330852 fabB Staphylococcus aureus subsp. aureus str. JKD6008 3-oxoacyl-(acyl carrier protein) synthase II YP_005744301.1 995967 D 546342 CDS YP_005744302.1 384861582 12330853 complement(997266..997637) 1 NC_017341.1 hypothetical protein 997637 12330853 SAA6008_00938 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744302.1 997266 R 546342 CDS YP_005744303.1 384861583 12330854 997880..998806 1 NC_017341.1 oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein 998806 oppB 12330854 oppB Staphylococcus aureus subsp. aureus str. JKD6008 oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein YP_005744303.1 997880 D 546342 CDS YP_005744304.1 384861584 12330855 998806..999876 1 NC_017341.1 oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein 999876 oppC 12330855 oppC Staphylococcus aureus subsp. aureus str. JKD6008 oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein YP_005744304.1 998806 D 546342 CDS YP_005744305.1 384861585 12330856 999893..1000975 1 NC_017341.1 oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein 1000975 oppD 12330856 oppD Staphylococcus aureus subsp. aureus str. JKD6008 oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein YP_005744305.1 999893 D 546342 CDS YP_005744306.1 384861586 12330857 1000965..1001906 1 NC_017341.1 oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein 1001906 oppF 12330857 oppF Staphylococcus aureus subsp. aureus str. JKD6008 oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein YP_005744306.1 1000965 D 546342 CDS YP_005744307.1 384861587 12330858 1001925..1003580 1 NC_017341.1 oligopeptide ABC superfamily ATP binding cassette transporter, binding protein 1003580 oppA 12330858 oppA Staphylococcus aureus subsp. aureus str. JKD6008 oligopeptide ABC superfamily ATP binding cassette transporter, binding protein YP_005744307.1 1001925 D 546342 CDS YP_005744308.1 384861588 12330859 1003792..1005438 1 NC_017341.1 oligopeptide ABC transporter substrate-binding protein 1005438 12330859 SAA6008_00944 Staphylococcus aureus subsp. aureus str. JKD6008 oligopeptide ABC transporter substrate-binding protein YP_005744308.1 1003792 D 546342 CDS YP_005744309.1 384861589 12330860 1005556..1006542 1 NC_017341.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein SMART: AAA ATPase KEGG: sav:SAV0992 oligopeptide ABC transporter ATP-binding protein homologue; oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein 1006542 12330860 SAA6008_00945 Staphylococcus aureus subsp. aureus str. JKD6008 oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein YP_005744309.1 1005556 D 546342 CDS YP_005744310.1 384861590 12330861 1006545..1007525 1 NC_017341.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein SMART: AAA ATPase KEGG: sav:SAV0993 oligopeptide transport system ATP-binding protein AppF homologue; oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein 1007525 12330861 SAA6008_00946 Staphylococcus aureus subsp. aureus str. JKD6008 oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein YP_005744310.1 1006545 D 546342 CDS YP_005744311.1 384861591 12330862 1007551..1008480 1 NC_017341.1 oligopeptide ABC transporter membrane protein 1008480 12330862 SAA6008_00947 Staphylococcus aureus subsp. aureus str. JKD6008 oligopeptide ABC transporter membrane protein YP_005744311.1 1007551 D 546342 CDS YP_005744312.1 384861592 12330863 1008492..1009373 1 NC_017341.1 PFAM: binding-protein-dependent transport systems inner membrane component; oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein 1009373 12330863 SAA6008_00948 Staphylococcus aureus subsp. aureus str. JKD6008 oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein YP_005744312.1 1008492 D 546342 CDS YP_005744313.1 384861593 12330864 complement(1009415..1010404) 1 NC_017341.1 putative tryptophanyl-tRNA synthetase 1010404 trpS 12330864 trpS Staphylococcus aureus subsp. aureus str. JKD6008 putative tryptophanyl-tRNA synthetase YP_005744313.1 1009415 R 546342 CDS YP_005744314.1 384861594 12330865 1010699..1011094 1 NC_017341.1 transcriptional regulator Spx 1011094 spxA 12330865 spxA Staphylococcus aureus subsp. aureus str. JKD6008 transcriptional regulator Spx YP_005744314.1 1010699 D 546342 CDS YP_005744315.1 384861595 12330866 1011465..1012184 1 NC_017341.1 putative negative regulator of genetic competence 1012184 mecA2 12330866 mecA2 Staphylococcus aureus subsp. aureus str. JKD6008 putative negative regulator of genetic competence YP_005744315.1 1011465 D 546342 CDS YP_005744316.1 384861596 12330868 1013338..1015146 1 NC_017341.1 TIGRFAM: oligoendopeptidase F PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F KEGG: sas:SAS0870 putative oligopeptidase; oligoendopeptidase F 1015146 12330868 SAA6008_00954 Staphylococcus aureus subsp. aureus str. JKD6008 oligoendopeptidase F YP_005744316.1 1013338 D 546342 CDS YP_005744317.1 384861597 12330869 complement(1015606..1016412) 1 NC_017341.1 hypothetical protein 1016412 12330869 SAA6008_00955 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744317.1 1015606 R 546342 CDS YP_005744318.1 384861598 12330870 complement(1016435..1016800) 1 NC_017341.1 globin family protein 1016800 12330870 SAA6008_00956 Staphylococcus aureus subsp. aureus str. JKD6008 globin family protein YP_005744318.1 1016435 R 546342 CDS YP_005744319.1 384861599 12330871 complement(1016904..1017497) 1 NC_017341.1 adenylate cyclase 1017497 12330871 SAA6008_00957 Staphylococcus aureus subsp. aureus str. JKD6008 adenylate cyclase YP_005744319.1 1016904 R 546342 CDS YP_005744320.1 384861600 12330872 1017683..1018030 1 NC_017341.1 hypothetical protein 1018030 12330872 SAA6008_00958 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744320.1 1017683 D 546342 CDS YP_005744321.1 384861601 12330873 1018047..1018682 1 NC_017341.1 GTP pyrophosphokinase 1018682 12330873 SAA6008_00959 Staphylococcus aureus subsp. aureus str. JKD6008 GTP pyrophosphokinase YP_005744321.1 1018047 D 546342 CDS YP_005744322.1 384861602 12330874 1018699..1019508 1 NC_017341.1 catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 1019508 ppnK 12330874 ppnK Staphylococcus aureus subsp. aureus str. JKD6008 inorganic polyphosphate/ATP-NAD kinase YP_005744322.1 1018699 D 546342 CDS YP_005744323.1 384861603 12330875 1019505..1020359 1 NC_017341.1 RluD subfamily ribosomal large subunit pseudouridine synthase 1020359 rluA1 12330875 rluA1 Staphylococcus aureus subsp. aureus str. JKD6008 RluD subfamily ribosomal large subunit pseudouridine synthase YP_005744323.1 1019505 D 546342 CDS YP_005744324.1 384861604 12330876 1020380..1021765 1 NC_017341.1 MgtE family magnesium (Mg2+)/cobalt (Co2+) transporter-E 1021765 mgtE 12330876 mgtE Staphylococcus aureus subsp. aureus str. JKD6008 MgtE family magnesium (Mg2+)/cobalt (Co2+) transporter-E YP_005744324.1 1020380 D 546342 CDS YP_005744325.1 384861605 12330877 1021775..1023619 1 NC_017341.1 transporter, monovalent cation:proton antiporter-2 (CPA2) family protein 1023619 12330877 SAA6008_00963 Staphylococcus aureus subsp. aureus str. JKD6008 transporter, monovalent cation:proton antiporter-2 (CPA2) family protein YP_005744325.1 1021775 D 546342 CDS YP_005744326.1 384861606 12330878 1023901..1025073 1 NC_017341.1 transposase for IS256 1025073 12330878 SAA6008_00964 Staphylococcus aureus subsp. aureus str. JKD6008 transposase for IS256 YP_005744326.1 1023901 D 546342 CDS YP_005744327.1 384861607 12330879 1025229..1025999 1 NC_017341.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-acyl-carrier-protein reductase, FabI 1025999 fabI 12330879 fabI Staphylococcus aureus subsp. aureus str. JKD6008 enoyl-acyl-carrier-protein reductase, FabI YP_005744327.1 1025229 D 546342 CDS YP_005744328.1 384861608 12330880 complement(1026194..1027210) 1 NC_017341.1 member of the PurR regulon; putative permease 1027210 12330880 SAA6008_00966 Staphylococcus aureus subsp. aureus str. JKD6008 putative permease YP_005744328.1 1026194 R 546342 CDS YP_005744329.1 384861609 12330881 1027621..1029189 1 NC_017341.1 sodium/alanine symporter 1029189 alsT 12330881 alsT Staphylococcus aureus subsp. aureus str. JKD6008 sodium/alanine symporter YP_005744329.1 1027621 D 546342 CDS YP_005744330.1 384861610 12330882 1029331..1030089 1 NC_017341.1 Enterochelin esterase-like enzyme 1030089 fes 12330882 fes Staphylococcus aureus subsp. aureus str. JKD6008 Enterochelin esterase-like enzyme YP_005744330.1 1029331 D 546342 CDS YP_005744331.1 384861611 12330883 1030283..1030792 1 NC_017341.1 Some domain similarity with 2'-5' RNA ligase (Translation, ribosomal structure and biogenesis); hypothetical protein 1030792 12330883 SAA6008_00969 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744331.1 1030283 D 546342 CDS YP_005744332.1 384861612 12330884 complement(1030905..1032095) 1 NC_017341.1 MFS family major facilitator transporter 1032095 12330884 SAA6008_00971 Staphylococcus aureus subsp. aureus str. JKD6008 MFS family major facilitator transporter YP_005744332.1 1030905 R 546342 CDS YP_005744333.1 384861613 12330885 complement(1032073..1033248) 1 NC_017341.1 UDP-glucose diacylglycerol glucosyltransferase 1033248 ypfP 12330885 ypfP Staphylococcus aureus subsp. aureus str. JKD6008 UDP-glucose diacylglycerol glucosyltransferase YP_005744333.1 1032073 R 546342 CDS YP_005744334.1 384861614 12330886 1033681..1035162 1 NC_017341.1 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 1035162 murE 12330886 murE Staphylococcus aureus subsp. aureus str. JKD6008 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase YP_005744334.1 1033681 D 546342 CDS YP_005744335.1 384861615 12330887 1035266..1035406 1 NC_017341.1 hypothetical protein 1035406 12330887 SAA6008_00974 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744335.1 1035266 D 546342 CDS YP_005744336.1 384861616 12330888 1035406..1036968 1 NC_017341.1 peptide chain release factor 3 1036968 prfC 12330888 prfC Staphylococcus aureus subsp. aureus str. JKD6008 peptide chain release factor 3 YP_005744336.1 1035406 D 546342 CDS YP_005744337.1 384861617 12330889 1037270..1038073 1 NC_017341.1 membrane protein TerC 1038073 terC 12330889 terC Staphylococcus aureus subsp. aureus str. JKD6008 membrane protein TerC YP_005744337.1 1037270 D 546342 CDS YP_005744338.1 384861618 12330890 1038292..1040616 1 NC_017341.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap SMART: PDZ/DHR/GLGF domain protein KEGG, DegP/HtrA, do-like protein; Trypsin-like serine protease 1040616 12330890 SAA6008_00977 Staphylococcus aureus subsp. aureus str. JKD6008 Trypsin-like serine protease YP_005744338.1 1038292 D 546342 CDS YP_005744339.1 384861619 12330891 1040633..1041991 1 NC_017341.1 Trk family potassium (K+) transporter, membrane protein 1041991 trkH 12330891 trkH Staphylococcus aureus subsp. aureus str. JKD6008 Trk family potassium (K+) transporter, membrane protein YP_005744339.1 1040633 D 546342 CDS YP_005744340.1 384861620 12330892 1042130..1043641 1 NC_017341.1 2',3'-cyclic-nucleotide 2'-phosphodiesterase 1043641 12330892 SAA6008_00979 Staphylococcus aureus subsp. aureus str. JKD6008 2',3'-cyclic-nucleotide 2'-phosphodiesterase YP_005744340.1 1042130 D 546342 CDS YP_005744341.1 384861621 12330895 complement(1044128..1044697) 1 NC_017341.1 identified by match to protein family HMM PF06338; competence transcription factor ComK 1044697 comK 12330895 comK Staphylococcus aureus subsp. aureus str. JKD6008 competence transcription factor ComK YP_005744341.1 1044128 R 546342 CDS YP_005744342.1 384861622 12330896 1044907..1045125 1 NC_017341.1 contains and IDEAL PFAM doman; hypothetical protein 1045125 12330896 SAA6008_00981 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744342.1 1044907 D 546342 CDS YP_005744343.1 384861623 12330897 complement(1045206..1046192) 1 NC_017341.1 lipoyltransferase and lipoate-protein ligase 1046192 12330897 SAA6008_00982 Staphylococcus aureus subsp. aureus str. JKD6008 lipoyltransferase and lipoate-protein ligase YP_005744343.1 1045206 R 546342 CDS YP_005744344.1 384861624 12330898 1046391..1046567 1 NC_017341.1 hypothetical protein 1046567 12330898 SAA6008_00983 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744344.1 1046391 D 546342 CDS YP_005744345.1 384861625 12330899 1046654..1047184 1 NC_017341.1 hypothetical protein 1047184 12330899 SAA6008_00984 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744345.1 1046654 D 546342 CDS YP_005744346.1 384861626 12330900 1048528..1050492 1 NC_017341.1 membrane protein 1050492 12330900 SAA6008_00985 Staphylococcus aureus subsp. aureus str. JKD6008 membrane protein YP_005744346.1 1048528 D 546342 CDS YP_005744347.1 384861627 12330901 1050495..1050815 1 NC_017341.1 contains an N-terminal signal sequence; hypothetical protein 1050815 12330901 SAA6008_00986 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744347.1 1050495 D 546342 CDS YP_005744348.1 384861628 12330902 1050812..1051453 1 NC_017341.1 PFAM: ABC transporter related SMART: AAA ATPase KEGG: sav:SAV1035 conserved hypothetical protein; ABC transporter ATP-binding protein 1051453 12330902 SAA6008_00987 Staphylococcus aureus subsp. aureus str. JKD6008 ABC transporter ATP-binding protein YP_005744348.1 1050812 D 546342 CDS YP_005744349.1 384861629 12330903 complement(1051541..1051729) 1 NC_017341.1 hypothetical protein 1051729 12330903 SAA6008_00988 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744349.1 1051541 R 546342 CDS YP_005744350.1 384861630 12330904 1052110..1052397 1 NC_017341.1 hypothetical protein 1052397 12330904 SAA6008_00989 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744350.1 1052110 D 546342 CDS YP_005744351.1 384861631 12330905 1052403..1053884 1 NC_017341.1 glycoside hydrolase family protein 1053884 12330905 SAA6008_00990 Staphylococcus aureus subsp. aureus str. JKD6008 glycoside hydrolase family protein YP_005744351.1 1052403 D 546342 CDS YP_005744352.1 384861632 12330906 complement(1053973..1054350) 1 NC_017341.1 putative DoxX family membrane protein 1054350 12330906 SAA6008_00991 Staphylococcus aureus subsp. aureus str. JKD6008 putative DoxX family membrane protein YP_005744352.1 1053973 R 546342 CDS YP_005744353.1 384861633 12330907 1054850..1055776 1 NC_017341.1 conatins a iron-dicitrate transporter substrate-binding subunit domain, identified by match to protein family HMM PF01497; ferrichrome ABC transporter subunit 1055776 12330907 SAA6008_00992 Staphylococcus aureus subsp. aureus str. JKD6008 ferrichrome ABC transporter subunit YP_005744353.1 1054850 D 546342 CDS YP_005744354.1 384861634 12330908 complement(1055822..1055938) 1 NC_017341.1 hypothetical protein 1055938 12330908 SAA6008_00993 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744354.1 1055822 R 546342 CDS YP_005744355.1 384861635 12330909 complement(1056017..1056232) 1 NC_017341.1 putative TM2 domain-containing protein 1056232 12330909 SAA6008_00994 Staphylococcus aureus subsp. aureus str. JKD6008 putative TM2 domain-containing protein YP_005744355.1 1056017 R 546342 CDS YP_005744356.1 384861636 12330910 1056397..1056948 1 NC_017341.1 GNAT family acetyltransferase 1056948 12330910 SAA6008_00995 Staphylococcus aureus subsp. aureus str. JKD6008 GNAT family acetyltransferase YP_005744356.1 1056397 D 546342 CDS YP_005744357.1 384861637 12330911 complement(1057000..1057938) 1 NC_017341.1 systematic name is 1,4-dihydroxy-2-naphthoate octaprenyltransferase; DHNA-octaprenyltransferase 1057938 menA 12330911 menA Staphylococcus aureus subsp. aureus str. JKD6008 DHNA-octaprenyltransferase YP_005744357.1 1057000 R 546342 CDS YP_005744358.1 384861638 12330912 1058120..1059481 1 NC_017341.1 isochorismate synthase 1059481 menF 12330912 menF Staphylococcus aureus subsp. aureus str. JKD6008 isochorismate synthase YP_005744358.1 1058120 D 546342 CDS YP_005744359.1 384861639 12330913 1059468..1061141 1 NC_017341.1 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase 1061141 menD 12330913 menD Staphylococcus aureus subsp. aureus str. JKD6008 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase YP_005744359.1 1059468 D 546342 CDS YP_005744360.1 384861640 12330914 1061128..1061931 1 NC_017341.1 acyl-CoA thioester hydrolase 1061931 yfbB 12330914 yfbB Staphylococcus aureus subsp. aureus str. JKD6008 acyl-CoA thioester hydrolase YP_005744360.1 1061128 D 546342 CDS YP_005744361.1 384861641 12330915 1061924..1062745 1 NC_017341.1 putative naphthoate synthase 1062745 menB 12330915 menB Staphylococcus aureus subsp. aureus str. JKD6008 putative naphthoate synthase YP_005744361.1 1061924 D 546342 CDS YP_005744362.1 384861642 12330916 complement(1062984..1063313) 1 NC_017341.1 staphostatin B 1063313 12330916 SAA6008_01001 Staphylococcus aureus subsp. aureus str. JKD6008 staphostatin B YP_005744362.1 1062984 R 546342 CDS YP_005744363.1 384861643 12330917 complement(1063351..1064484) 1 NC_017341.1 glycoside hydrolase family protein 1064484 sspB 12330917 sspB Staphylococcus aureus subsp. aureus str. JKD6008 glycoside hydrolase family protein YP_005744363.1 1063351 R 546342 CDS YP_005744364.1 384861644 12330918 complement(1064614..1065624) 1 NC_017341.1 glutamyl endopeptidase 1065624 12330918 SAA6008_01003 Staphylococcus aureus subsp. aureus str. JKD6008 glutamyl endopeptidase YP_005744364.1 1064614 R 546342 CDS YP_005744365.1 384861645 12330919 complement(1066151..1067305) 1 NC_017341.1 aromatic amino acid transferase 1067305 12330919 SAA6008_01004 Staphylococcus aureus subsp. aureus str. JKD6008 aromatic amino acid transferase YP_005744365.1 1066151 R 546342 CDS YP_005744366.1 384861646 12330920 complement(1067501..1068511) 1 NC_017341.1 putative acetyltransferase 1068511 12330920 SAA6008_01005 Staphylococcus aureus subsp. aureus str. JKD6008 putative acetyltransferase YP_005744366.1 1067501 R 546342 CDS YP_005744367.1 384861647 12330921 1068664..1069083 1 NC_017341.1 Identified by match to protein family HMM PF01047. Domain similarity with Mar proteins (multiple antibiotic resistance, a non-specific resistance system).; MarR family transcriptional regulator 1069083 12330921 SAA6008_01006 Staphylococcus aureus subsp. aureus str. JKD6008 MarR family transcriptional regulator YP_005744367.1 1068664 D 546342 CDS YP_005744368.1 384861648 12330922 complement(1069290..1073060) 1 NC_017341.1 PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase SMART: Lysozyme subfamily 2; bifunctional N-acetylmuramoyl-L-alanine amidase/endo-beta-N-acetylglucosaminidase, Atl 1073060 atl 12330922 atl Staphylococcus aureus subsp. aureus str. JKD6008 bifunctional N-acetylmuramoyl-L-alanine amidase/endo-beta-N-acetylglucosaminidase, Atl YP_005744368.1 1069290 R 546342 CDS YP_005744369.1 384861649 12330923 complement(1073288..1073722) 1 NC_017341.1 GNAT family acetyltransferase 1073722 12330923 SAA6008_01008 Staphylococcus aureus subsp. aureus str. JKD6008 GNAT family acetyltransferase YP_005744369.1 1073288 R 546342 CDS YP_005744370.1 384861650 12330924 1073896..1075068 1 NC_017341.1 transposase for IS256 1075068 12330924 SAA6008_01009 Staphylococcus aureus subsp. aureus str. JKD6008 transposase for IS256 YP_005744370.1 1073896 D 546342 CDS YP_005744371.1 384861651 12330925 complement(1075210..1075680) 1 NC_017341.1 hypothetical protein 1075680 12330925 SAA6008_01010 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744371.1 1075210 R 546342 CDS YP_005744372.1 384861652 12330926 complement(1075728..1076906) 1 NC_017341.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family PFAM: cell envelope-related transcriptional attenuator KEGG: sas:SAS0991 hypothetical protein; cell envelope transcriptional attenuator 1076906 12330926 SAA6008_01011 Staphylococcus aureus subsp. aureus str. JKD6008 cell envelope transcriptional attenuator YP_005744372.1 1075728 R 546342 CDS YP_005744373.1 384861653 12330927 1077396..1078589 1 NC_017341.1 identified by match to protein family HMM PF00144; Autolysis and methicillin resistant-related protein 1078589 12330927 SAA6008_01012 Staphylococcus aureus subsp. aureus str. JKD6008 Autolysis and methicillin resistant-related protein YP_005744373.1 1077396 D 546342 CDS YP_005744374.1 384861654 12330928 complement(1079126..1079404) 1 NC_017341.1 putative quinol oxidase polypeptide IV QoxD 1079404 qoxD 12330928 qoxD Staphylococcus aureus subsp. aureus str. JKD6008 putative quinol oxidase polypeptide IV QoxD YP_005744374.1 1079126 R 546342 CDS YP_005744375.1 384861655 12330929 complement(1079413..1080018) 1 NC_017341.1 Cytochrome aa3 quinol oxidase, subunit III 1080018 qoxC 12330929 qoxC Staphylococcus aureus subsp. aureus str. JKD6008 Cytochrome aa3 quinol oxidase, subunit III YP_005744375.1 1079413 R 546342 CDS YP_005744376.1 384861656 12330930 complement(1080008..1081996) 1 NC_017341.1 Cytochrome aa3 quinol oxidase, subunit I 1081996 qoxB 12330930 qoxB Staphylococcus aureus subsp. aureus str. JKD6008 Cytochrome aa3 quinol oxidase, subunit I YP_005744376.1 1080008 R 546342 CDS YP_005744377.1 384861657 12330931 complement(1081996..1083096) 1 NC_017341.1 putative quinol oxidase polypeptide II precursor 1083096 qoxA 12330931 qoxA Staphylococcus aureus subsp. aureus str. JKD6008 putative quinol oxidase polypeptide II precursor YP_005744377.1 1081996 R 546342 CDS YP_005744378.1 384861658 12330932 complement(1083668..1083985) 1 NC_017341.1 Ig-like domain (group 3) protein 1083985 12330932 SAA6008_01018 Staphylococcus aureus subsp. aureus str. JKD6008 Ig-like domain (group 3) protein YP_005744378.1 1083668 R 546342 CDS YP_005744379.1 384861659 12330933 complement(1084790..1085650) 1 NC_017341.1 PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase KEGG: sav:SAV1063 FolD bifunctional protein; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase, FolD 1085650 folD 12330933 folD Staphylococcus aureus subsp. aureus str. JKD6008 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase, FolD YP_005744379.1 1084790 R 546342 CDS YP_005744380.1 384861660 12330934 1085914..1086333 1 NC_017341.1 putative phosphoribosylaminoimidazole carboxylase catalytic subunit 1086333 purE 12330934 purE Staphylococcus aureus subsp. aureus str. JKD6008 putative phosphoribosylaminoimidazole carboxylase catalytic subunit YP_005744380.1 1085914 D 546342 CDS YP_005744381.1 384861661 12330935 1086320..1087444 1 NC_017341.1 phosphoribosylaminoimidazole carboxylase ATPase subunit 1087444 purK 12330935 purK Staphylococcus aureus subsp. aureus str. JKD6008 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_005744381.1 1086320 D 546342 CDS YP_005744382.1 384861662 12330936 1087448..1088152 1 NC_017341.1 putative phosphoribosylaminoimidazole-succinocarboxamide synthase 1088152 purC 12330936 purC Staphylococcus aureus subsp. aureus str. JKD6008 putative phosphoribosylaminoimidazole-succinocarboxamide synthase YP_005744382.1 1087448 D 546342 CDS YP_005744383.1 384861663 12330937 1088152..1088415 1 NC_017341.1 phosphoribosylformylglycinamidine synthase subunit PurS 1088415 purS 12330937 purS Staphylococcus aureus subsp. aureus str. JKD6008 phosphoribosylformylglycinamidine synthase subunit PurS YP_005744383.1 1088152 D 546342 CDS YP_005744384.1 384861664 12330938 1088417..1089088 1 NC_017341.1 putative phosphoribosylformylglycinamidine synthase I 1089088 purQ 12330938 purQ Staphylococcus aureus subsp. aureus str. JKD6008 putative phosphoribosylformylglycinamidine synthase I YP_005744384.1 1088417 D 546342 CDS YP_005744385.1 384861665 12330939 1089081..1091270 1 NC_017341.1 putative phosphoribosylformylglycinamidine synthase II 1091270 purL 12330939 purL Staphylococcus aureus subsp. aureus str. JKD6008 putative phosphoribosylformylglycinamidine synthase II YP_005744385.1 1089081 D 546342 CDS YP_005744386.1 384861666 12330940 1091249..1092733 1 NC_017341.1 putative amidophosphoribosyltransferase precursor 1092733 purF 12330940 purF Staphylococcus aureus subsp. aureus str. JKD6008 putative amidophosphoribosyltransferase precursor YP_005744386.1 1091249 D 546342 CDS YP_005744387.1 384861667 12330941 1092726..1093754 1 NC_017341.1 putative phosphoribosylformylglycinamidine cyclo-ligase 1093754 purM 12330941 purM Staphylococcus aureus subsp. aureus str. JKD6008 putative phosphoribosylformylglycinamidine cyclo-ligase YP_005744387.1 1092726 D 546342 CDS YP_005744388.1 384861668 12330942 1093757..1094323 1 NC_017341.1 putative phosphoribosylglycinamide formyltransferase 1094323 purN 12330942 purN Staphylococcus aureus subsp. aureus str. JKD6008 putative phosphoribosylglycinamide formyltransferase YP_005744388.1 1093757 D 546342 CDS YP_005744389.1 384861669 12330943 1094338..1095816 1 NC_017341.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 1095816 purH 12330943 purH Staphylococcus aureus subsp. aureus str. JKD6008 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_005744389.1 1094338 D 546342 CDS YP_005744390.1 384861670 12330944 1095838..1097085 1 NC_017341.1 phosphoribosylamine--glycine ligase PurD 1097085 purD 12330944 purD Staphylococcus aureus subsp. aureus str. JKD6008 phosphoribosylamine--glycine ligase PurD YP_005744390.1 1095838 D 546342 CDS YP_005744391.1 384861671 12330945 complement(1097350..1098156) 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, membrane protein 1098156 ykoC 12330945 ykoC Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, membrane protein YP_005744391.1 1097350 R 546342 CDS YP_005744392.1 384861672 12330946 complement(1098149..1099549) 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, ABC protein 1099549 ykoD 12330946 ykoD Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, ABC protein YP_005744392.1 1098149 R 546342 CDS YP_005744393.1 384861673 12330947 complement(1099564..1100139) 1 NC_017341.1 cobalt ABC transporter permease 1100139 12330947 SAA6008_01033 Staphylococcus aureus subsp. aureus str. JKD6008 cobalt ABC transporter permease YP_005744393.1 1099564 R 546342 CDS YP_005744394.1 384861674 12330948 complement(1100723..1100857) 1 NC_017341.1 hypothetical protein 1100857 12330948 SAA6008_01034 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744394.1 1100723 R 546342 CDS YP_005744395.1 384861675 12330949 1101009..1102304 1 NC_017341.1 membrane protein 1102304 12330949 SAA6008_01035 Staphylococcus aureus subsp. aureus str. JKD6008 membrane protein YP_005744395.1 1101009 D 546342 CDS YP_005744396.1 384861676 12330950 1102729..1103901 1 NC_017341.1 putative SAM-dependent methyltransferase 1103901 12330950 SAA6008_01036 Staphylococcus aureus subsp. aureus str. JKD6008 putative SAM-dependent methyltransferase YP_005744396.1 1102729 D 546342 CDS YP_005744397.1 384861677 12330951 1103955..1104497 1 NC_017341.1 hypothetical protein 1104497 12330951 SAA6008_01037 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744397.1 1103955 D 546342 CDS YP_005744398.1 384861678 12330952 1104651..1104917 1 NC_017341.1 part of PTS system; phosphocarrier protein Hpr 1104917 12330952 SAA6008_01038 Staphylococcus aureus subsp. aureus str. JKD6008 phosphocarrier protein Hpr YP_005744398.1 1104651 D 546342 CDS YP_005744399.1 384861679 12330953 1104920..1106638 1 NC_017341.1 phosphoenolpyruvate-protein phosphotransferase 1106638 ptsA 12330953 ptsA Staphylococcus aureus subsp. aureus str. JKD6008 phosphoenolpyruvate-protein phosphotransferase YP_005744399.1 1104920 D 546342 CDS YP_005744400.1 384861680 12330954 complement(1106875..1107108) 1 NC_017341.1 glutaredoxin family protein 1107108 12330954 SAA6008_01040 Staphylococcus aureus subsp. aureus str. JKD6008 glutaredoxin family protein YP_005744400.1 1106875 R 546342 CDS YP_005744401.1 384861681 12330955 1107306..1108667 1 NC_017341.1 identified by match to protein family HMM PF01654; cytochrome ubiquinol oxidase 1108667 12330955 SAA6008_01041 Staphylococcus aureus subsp. aureus str. JKD6008 cytochrome ubiquinol oxidase YP_005744401.1 1107306 D 546342 CDS YP_005744402.1 384861682 12330956 1108664..1109683 1 NC_017341.1 Cytochrome bd-type quinol oxidase subunit 2-like protein 1109683 cydB 12330956 cydB Staphylococcus aureus subsp. aureus str. JKD6008 Cytochrome bd-type quinol oxidase subunit 2-like protein YP_005744402.1 1108664 D 546342 CDS YP_005744403.1 384861683 12330957 1109816..1110478 1 NC_017341.1 NAD+ binding potassium transporter 1110478 trkA 12330957 trkA Staphylococcus aureus subsp. aureus str. JKD6008 NAD+ binding potassium transporter YP_005744403.1 1109816 D 546342 CDS YP_005744404.1 384861684 12330958 complement(1110827..1112524) 1 NC_017341.1 mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) 1112524 12330958 SAA6008_01044 Staphylococcus aureus subsp. aureus str. JKD6008 mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) YP_005744404.1 1110827 R 546342 CDS YP_005744405.1 384861685 12330959 complement(1112524..1112742) 1 NC_017341.1 hypothetical protein 1112742 esaB 12330959 esaB Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744405.1 1112524 R 546342 CDS YP_005744406.1 384861686 12330960 complement(1113223..1113774) 1 NC_017341.1 putative polypeptide deformylase 2 1113774 def 12330960 def Staphylococcus aureus subsp. aureus str. JKD6008 putative polypeptide deformylase 2 YP_005744406.1 1113223 R 546342 CDS YP_005744407.1 384861687 12330961 1114139..1114765 1 NC_017341.1 putative cell-wall binding lipoprotein, YkyA 1114765 12330961 SAA6008_01047 Staphylococcus aureus subsp. aureus str. JKD6008 putative cell-wall binding lipoprotein, YkyA YP_005744407.1 1114139 D 546342 CDS YP_005744408.1 384861688 12330962 1114936..1116048 1 NC_017341.1 putative pyruvate dehydrogenase E1 component subunit alpha 1116048 pdhA 12330962 pdhA Staphylococcus aureus subsp. aureus str. JKD6008 putative pyruvate dehydrogenase E1 component subunit alpha YP_005744408.1 1114936 D 546342 CDS YP_005744409.1 384861689 12330963 1116052..1117029 1 NC_017341.1 putative pyruvate dehydrogenase E1 component subunit beta 1117029 pdhB 12330963 pdhB Staphylococcus aureus subsp. aureus str. JKD6008 putative pyruvate dehydrogenase E1 component subunit beta YP_005744409.1 1116052 D 546342 CDS YP_005744410.1 384861690 12330964 1117120..1118412 1 NC_017341.1 pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase 1118412 pdhC 12330964 pdhC Staphylococcus aureus subsp. aureus str. JKD6008 pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase YP_005744410.1 1117120 D 546342 CDS YP_005744411.1 384861691 12330965 1118416..1119822 1 NC_017341.1 dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 1119822 pdhD 12330965 pdhD Staphylococcus aureus subsp. aureus str. JKD6008 dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 YP_005744411.1 1118416 D 546342 CDS YP_005744412.1 384861692 12330966 1119990..1120265 1 NC_017341.1 hypothetical protein 1120265 12330966 SAA6008_01052 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744412.1 1119990 D 546342 CDS YP_005744413.1 384861693 12330967 1120409..1120948 1 NC_017341.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein KEGG: sao:SAOUHSC_01045 hypothetical protein; transcriptional regulator Cro/CI family 1120948 12330967 SAA6008_01053 Staphylococcus aureus subsp. aureus str. JKD6008 transcriptional regulator Cro/CI family YP_005744413.1 1120409 D 546342 CDS YP_005744414.1 384861694 12330968 1120961..1122055 1 NC_017341.1 putrescine/spermidine ABC transporter ATPase 1122055 potA 12330968 potA Staphylococcus aureus subsp. aureus str. JKD6008 putrescine/spermidine ABC transporter ATPase YP_005744414.1 1120961 D 546342 CDS YP_005744415.1 384861695 12330969 1122093..1122845 1 NC_017341.1 binding-protein-dependent transport system inner membrane protein 1122845 potB 12330969 potB Staphylococcus aureus subsp. aureus str. JKD6008 binding-protein-dependent transport system inner membrane protein YP_005744415.1 1122093 D 546342 CDS YP_005744416.1 384861696 12330970 1122920..1123660 1 NC_017341.1 binding-protein-dependent transport system inner membrane protein 1123660 potC 12330970 potC Staphylococcus aureus subsp. aureus str. JKD6008 binding-protein-dependent transport system inner membrane protein YP_005744416.1 1122920 D 546342 CDS YP_005744417.1 384861697 12330971 1123660..1124733 1 NC_017341.1 spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein 1124733 potD 12330971 potD Staphylococcus aureus subsp. aureus str. JKD6008 spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein YP_005744417.1 1123660 D 546342 CDS YP_005744418.1 384861698 12330972 1124807..1125826 1 NC_017341.1 hypothetical protein 1125826 12330972 SAA6008_01058 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744418.1 1124807 D 546342 CDS YP_005744419.1 384861699 12330973 1126109..1126528 1 NC_017341.1 hypothetical protein 1126528 12330973 SAA6008_01059 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744419.1 1126109 D 546342 CDS YP_005744420.1 384861700 12330974 complement(1126610..1127962) 1 NC_017341.1 Mn2+/Fe2+ transporter NRAMP family protein 1127962 12330974 SAA6008_01060 Staphylococcus aureus subsp. aureus str. JKD6008 Mn2+/Fe2+ transporter NRAMP family protein YP_005744420.1 1126610 R 546342 CDS YP_005744421.1 384861701 12330975 complement(1128146..1128760) 1 NC_017341.1 hypothetical protein 1128760 12330975 SAA6008_01061 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744421.1 1128146 R 546342 CDS YP_005744422.1 384861702 12330976 1128917..1129744 1 NC_017341.1 inositol monophosphatase 1129744 12330976 SAA6008_01062 Staphylococcus aureus subsp. aureus str. JKD6008 inositol monophosphatase YP_005744422.1 1128917 D 546342 CDS YP_005744423.1 384861703 12330977 complement(1129898..1130089) 1 NC_017341.1 hypothetical protein 1130089 12330977 SAA6008_01063 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744423.1 1129898 R 546342 CDS YP_005744424.1 384861704 12330978 1130191..1132038 1 NC_017341.1 small GTP-binding protein domain:GTP-binding protein TypA 1132038 typA 12330978 typA Staphylococcus aureus subsp. aureus str. JKD6008 small GTP-binding protein domain:GTP-binding protein TypA YP_005744424.1 1130191 D 546342 CDS YP_005744425.1 384861705 12330979 complement(1132178..1132345) 1 NC_017341.1 hypothetical protein 1132345 12330979 SAA6008_01065 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744425.1 1132178 R 546342 CDS YP_005744426.1 384861706 12330980 complement(1132347..1132829) 1 NC_017341.1 hypothetical protein 1132829 12330980 SAA6008_01066 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744426.1 1132347 R 546342 CDS YP_005744427.1 384861707 12330981 1132970..1133245 1 NC_017341.1 hypothetical protein 1133245 12330981 SAA6008_01067 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744427.1 1132970 D 546342 CDS YP_005744428.1 384861708 12330982 1133559..1134785 1 NC_017341.1 cell division membrane protein 1134785 ftsW 12330982 ftsW Staphylococcus aureus subsp. aureus str. JKD6008 cell division membrane protein YP_005744428.1 1133559 D 546342 CDS YP_005744429.1 384861709 12330983 1135339..1138791 1 NC_017341.1 putative pyruvate carboxylase 1138791 pycA 12330983 pycA Staphylococcus aureus subsp. aureus str. JKD6008 putative pyruvate carboxylase YP_005744429.1 1135339 D 546342 CDS YP_005744430.1 384861710 12330984 complement(1138931..1139842) 1 NC_017341.1 cytochrome oxidase assembly protein 1139842 ctaA 12330984 ctaA Staphylococcus aureus subsp. aureus str. JKD6008 cytochrome oxidase assembly protein YP_005744430.1 1138931 R 546342 CDS YP_005744431.1 384861711 12330985 1140282..1141193 1 NC_017341.1 putative protoheme IX farnesyltransferase 1141193 ctaB 12330985 ctaB Staphylococcus aureus subsp. aureus str. JKD6008 putative protoheme IX farnesyltransferase YP_005744431.1 1140282 D 546342 CDS YP_005744432.1 384861712 12330986 1141209..1141679 1 NC_017341.1 hypothetical protein 1141679 12330986 SAA6008_01072 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744432.1 1141209 D 546342 CDS YP_005744433.1 384861713 12330987 1142006..1143043 1 NC_017341.1 SCP/PR1-like extracellular protein 1143043 12330987 SAA6008_01073 Staphylococcus aureus subsp. aureus str. JKD6008 SCP/PR1-like extracellular protein YP_005744433.1 1142006 D 546342 CDS YP_005744434.1 384861714 12330988 1143059..1143493 1 NC_017341.1 hypothetical protein 1143493 12330988 SAA6008_01074 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744434.1 1143059 D 546342 CDS YP_005744435.1 384861715 12330989 complement(1143556..1144482) 1 NC_017341.1 PFAM: glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase 1144482 12330989 SAA6008_01075 Staphylococcus aureus subsp. aureus str. JKD6008 glycerophosphodiester phosphodiesterase YP_005744435.1 1143556 R 546342 CDS YP_005744436.1 384861716 12330990 1144721..1144975 1 NC_017341.1 hypothetical protein 1144975 12330990 SAA6008_01076 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744436.1 1144721 D 546342 CDS YP_005744437.1 384861717 12330991 complement(1144978..1145367) 1 NC_017341.1 hypothetical protein 1145367 12330991 SAA6008_01077 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744437.1 1144978 R 546342 CDS YP_005744438.1 384861718 12330992 1145437..1145979 1 NC_017341.1 site-specific DNA-methyltransferase (adenine-specific) 1145979 12330992 SAA6008_01078 Staphylococcus aureus subsp. aureus str. JKD6008 site-specific DNA-methyltransferase (adenine-specific) YP_005744438.1 1145437 D 546342 CDS YP_005744439.1 384861719 12330993 1145981..1146463 1 NC_017341.1 lipopolysaccharide core biosynthesis protein KdtB 1146463 kdtB 12330993 kdtB Staphylococcus aureus subsp. aureus str. JKD6008 lipopolysaccharide core biosynthesis protein KdtB YP_005744439.1 1145981 D 546342 CDS YP_005744440.1 384861720 12330994 complement(1146525..1147664) 1 NC_017341.1 hypothetical protein 1147664 12330994 SAA6008_01080 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744440.1 1146525 R 546342 CDS YP_005744441.1 384861721 12330995 1147791..1148348 1 NC_017341.1 PFAM: protein of unknown function DUF177 KEGG: sao:SAOUHSC_01077 hypothetical protein; hypothetical protein 1148348 12330995 SAA6008_01081 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744441.1 1147791 D 546342 CDS YP_005744442.1 384861722 12330996 1148428..1148601 1 NC_017341.1 50S ribosomal protein L32 1148601 rpmF 12330996 rpmF Staphylococcus aureus subsp. aureus str. JKD6008 50S ribosomal protein L32 YP_005744442.1 1148428 D 546342 CDS YP_005744443.1 384861723 12330997 complement(1148757..1150694) 1 NC_017341.1 iron transport associated domain-containing protein 1150694 isdB 12330997 isdB Staphylococcus aureus subsp. aureus str. JKD6008 iron transport associated domain-containing protein YP_005744443.1 1148757 R 546342 CDS YP_005744444.1 384861724 12330998 complement(1150897..1151949) 1 NC_017341.1 iron (Fe2+)-regulated surface determinant protein IsdA 1151949 isdA 12330998 isdA Staphylococcus aureus subsp. aureus str. JKD6008 iron (Fe2+)-regulated surface determinant protein IsdA YP_005744444.1 1150897 R 546342 CDS YP_005744445.1 384861725 12330999 1152158..1152841 1 NC_017341.1 iron (Fe2+)-regulated surface determinant protein IsdC 1152841 isdC 12330999 isdC Staphylococcus aureus subsp. aureus str. JKD6008 iron (Fe2+)-regulated surface determinant protein IsdC YP_005744445.1 1152158 D 546342 CDS YP_005744446.1 384861726 12331000 1152841..1153917 1 NC_017341.1 heme ABC transporter, membrane component IsdD 1153917 isdD 12331000 isdD Staphylococcus aureus subsp. aureus str. JKD6008 heme ABC transporter, membrane component IsdD YP_005744446.1 1152841 D 546342 CDS YP_005744447.1 384861727 12331001 1154046..1154792 1 NC_017341.1 iron compound ABC transporter 1154792 isdE 12331001 isdE Staphylococcus aureus subsp. aureus str. JKD6008 iron compound ABC transporter YP_005744447.1 1154046 D 546342 CDS YP_005744448.1 384861728 12331002 1154802..1155770 1 NC_017341.1 iron transport permease protein 1155770 isdF 12331002 isdF Staphylococcus aureus subsp. aureus str. JKD6008 iron transport permease protein YP_005744448.1 1154802 D 546342 CDS YP_005744449.1 384861729 12331003 1155832..1156566 1 NC_017341.1 sortase B transpeptidase 1156566 srtB 12331003 srtB Staphylococcus aureus subsp. aureus str. JKD6008 sortase B transpeptidase YP_005744449.1 1155832 D 546342 CDS YP_005744450.1 384861730 12331004 1156594..1156908 1 NC_017341.1 iron (Fe2+)-regulated surface determinant protein IsdG 1156908 isdG 12331004 isdG Staphylococcus aureus subsp. aureus str. JKD6008 iron (Fe2+)-regulated surface determinant protein IsdG YP_005744450.1 1156594 D 546342 CDS YP_005744451.1 384861731 12331005 1157292..1158032 1 NC_017341.1 SpoU rRNA methylase family protein 1158032 spoU 12331005 spoU Staphylococcus aureus subsp. aureus str. JKD6008 SpoU rRNA methylase family protein YP_005744451.1 1157292 D 546342 CDS YP_005744452.1 384861732 12331006 1158413..1159471 1 NC_017341.1 putative phenylalanyl-tRNA synthetase alpha chain 1159471 pheS 12331006 pheS Staphylococcus aureus subsp. aureus str. JKD6008 putative phenylalanyl-tRNA synthetase alpha chain YP_005744452.1 1158413 D 546342 CDS YP_005744453.1 384861733 12331007 1159471..1161873 1 NC_017341.1 putative phenylalanyl-tRNA synthetase beta chain 1161873 pheT 12331007 pheT Staphylococcus aureus subsp. aureus str. JKD6008 putative phenylalanyl-tRNA synthetase beta chain YP_005744453.1 1159471 D 546342 CDS YP_005744454.1 384861734 12331008 complement(1162044..1162982) 1 NC_017341.1 an endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease HIII 1162982 rnhC 12331008 rnhC Staphylococcus aureus subsp. aureus str. JKD6008 ribonuclease HIII YP_005744454.1 1162044 R 546342 CDS YP_005744455.1 384861735 12331009 1163352..1163618 1 NC_017341.1 putative cell division protein, ZapA 1163618 zapA 12331009 zapA Staphylococcus aureus subsp. aureus str. JKD6008 putative cell division protein, ZapA YP_005744455.1 1163352 D 546342 CDS YP_005744456.1 384861736 12331010 1163619..1164140 1 NC_017341.1 colicin V production protein 1164140 12331010 SAA6008_01096 Staphylococcus aureus subsp. aureus str. JKD6008 colicin V production protein YP_005744456.1 1163619 D 546342 CDS YP_005744457.1 384861737 12331011 1164213..1165925 1 NC_017341.1 contains a putative phosphoesterase domain; hypothetical protein 1165925 12331011 SAA6008_01097 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744457.1 1164213 D 546342 CDS YP_005744458.1 384861738 12331012 1165935..1168283 1 NC_017341.1 MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange; recombination and DNA strand exchange inhibitor protein 1168283 12331012 SAA6008_01098 Staphylococcus aureus subsp. aureus str. JKD6008 recombination and DNA strand exchange inhibitor protein YP_005744458.1 1165935 D 546342 CDS YP_005744459.1 384861739 12331013 1168456..1168770 1 NC_017341.1 thioredoxin 1168770 trxA 12331013 trxA Staphylococcus aureus subsp. aureus str. JKD6008 thioredoxin YP_005744459.1 1168456 D 546342 CDS YP_005744460.1 384861740 12331014 1169094..1170875 1 NC_017341.1 glycosyl transferase family protein 1170875 uvrC 12331014 uvrC Staphylococcus aureus subsp. aureus str. JKD6008 glycosyl transferase family protein YP_005744460.1 1169094 D 546342 CDS YP_005744461.1 384861741 12331015 1171199..1171813 1 NC_017341.1 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 1171813 sdhC 12331015 sdhC Staphylococcus aureus subsp. aureus str. JKD6008 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family YP_005744461.1 1171199 D 546342 CDS YP_005744462.1 384861742 12331016 1171865..1173631 1 NC_017341.1 putative succinate dehydrogenase flavoprotein subunit 1173631 sdhA 12331016 sdhA Staphylococcus aureus subsp. aureus str. JKD6008 putative succinate dehydrogenase flavoprotein subunit YP_005744462.1 1171865 D 546342 CDS YP_005744463.1 384861743 12331017 1173631..1174446 1 NC_017341.1 putative succinate dehydrogenase iron-sulfur protein 1174446 sdhB 12331017 sdhB Staphylococcus aureus subsp. aureus str. JKD6008 putative succinate dehydrogenase iron-sulfur protein YP_005744463.1 1173631 D 546342 CDS YP_005744464.1 384861744 12331018 1174682..1175482 1 NC_017341.1 putative glutamate racemase 1175482 murI 12331018 murI Staphylococcus aureus subsp. aureus str. JKD6008 putative glutamate racemase YP_005744464.1 1174682 D 546342 CDS YP_005744465.1 384861745 12331019 1175494..1176081 1 NC_017341.1 TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family PFAM: Ham1 family protein KEGG: sav:SAV1152 HAM1 protein; deoxyribonucleotide triphosphate pyrophosphatase 1176081 12331019 SAA6008_01105 Staphylococcus aureus subsp. aureus str. JKD6008 deoxyribonucleotide triphosphate pyrophosphatase YP_005744465.1 1175494 D 546342 CDS YP_005744466.1 384861746 12331020 1176074..1176577 1 NC_017341.1 putative metallophosphoesterase 1176577 12331020 SAA6008_01106 Staphylococcus aureus subsp. aureus str. JKD6008 putative metallophosphoesterase YP_005744466.1 1176074 D 546342 CDS YP_005744467.1 384861747 12331021 1177066..1177395 1 NC_017341.1 extracellular fibrinogen binding protein 1177395 ecb 12331021 ecb Staphylococcus aureus subsp. aureus str. JKD6008 extracellular fibrinogen binding protein YP_005744467.1 1177066 D 546342 CDS YP_005744468.1 384861748 12331022 1177557..1177673 1 NC_017341.1 hypothetical protein 1177673 12331022 SAA6008_01108 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744468.1 1177557 D 546342 CDS YP_005744469.1 384861749 12331023 complement(1177764..1178165) 1 NC_017341.1 formyl peptide receptor-like 1 inhibitory protein 1178165 flr 12331023 flr Staphylococcus aureus subsp. aureus str. JKD6008 formyl peptide receptor-like 1 inhibitory protein YP_005744469.1 1177764 R 546342 CDS YP_005744470.1 384861750 12331024 1178837..1179343 1 NC_017341.1 membrane protein 1179343 12331024 SAA6008_01110 Staphylococcus aureus subsp. aureus str. JKD6008 membrane protein YP_005744470.1 1178837 D 546342 CDS YP_005744471.1 384861751 12331025 1179602..1180099 1 NC_017341.1 fibrinogen-binding protein 1180099 efb 12331025 efb Staphylococcus aureus subsp. aureus str. JKD6008 fibrinogen-binding protein YP_005744471.1 1179602 D 546342 CDS YP_005744472.1 384861752 12331026 1180253..1180603 1 NC_017341.1 fibrinogen-binding protein precursor-related protein 1180603 scc 12331026 scc Staphylococcus aureus subsp. aureus str. JKD6008 fibrinogen-binding protein precursor-related protein YP_005744472.1 1180253 D 546342 CDS YP_005744473.1 384861753 12331027 complement(1181199..1181384) 1 NC_017341.1 hypothetical protein 1181384 12331027 SAA6008_01113 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744473.1 1181199 R 546342 CDS YP_005744474.1 384861754 12331028 complement(1182006..1182239) 1 NC_017341.1 hypothetical protein 1182239 12331028 SAA6008_01114 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744474.1 1182006 R 546342 CDS YP_005744475.1 384861755 12331029 complement(1182716..1183675) 1 NC_017341.1 alpha-hemolysin 1183675 hlY 12331029 hlY Staphylococcus aureus subsp. aureus str. JKD6008 alpha-hemolysin YP_005744475.1 1182716 R 546342 CDS YP_005744476.1 384861756 12331030 1184348..1184494 1 NC_017341.1 hypothetical protein 1184494 12331030 SAA6008_01116 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744476.1 1184348 D 546342 CDS YP_005744477.1 384861757 12331031 1184517..1184675 1 NC_017341.1 hypothetical protein 1184675 12331031 SAA6008_01117 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744477.1 1184517 D 546342 CDS YP_005744478.1 384861758 12331032 complement(1185176..1185892) 1 NC_017341.1 superantigen-like protein 1185892 12331032 SAA6008_01118 Staphylococcus aureus subsp. aureus str. JKD6008 superantigen-like protein YP_005744478.1 1185176 R 546342 CDS YP_005744479.1 384861759 12331033 complement(1186000..1186725) 1 NC_017341.1 superantigen-like protein 1186725 12331033 SAA6008_01119 Staphylococcus aureus subsp. aureus str. JKD6008 superantigen-like protein YP_005744479.1 1186000 R 546342 CDS YP_005744480.1 384861760 12331034 complement(1186820..1187545) 1 NC_017341.1 superantigen-like protein 1187545 12331034 SAA6008_01120 Staphylococcus aureus subsp. aureus str. JKD6008 superantigen-like protein YP_005744480.1 1186820 R 546342 CDS YP_005744481.1 384861761 12331035 1187983..1188984 1 NC_017341.1 ornithine carbamoyltransferase 1188984 argF 12331035 argF Staphylococcus aureus subsp. aureus str. JKD6008 ornithine carbamoyltransferase YP_005744481.1 1187983 D 546342 CDS YP_005744482.1 384861762 12331036 1189004..1189939 1 NC_017341.1 catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase, ArcC1 1189939 arcC1 12331036 arcC1 Staphylococcus aureus subsp. aureus str. JKD6008 carbamate kinase, ArcC1 YP_005744482.1 1189004 D 546342 CDS YP_005744483.1 384861763 12331037 1190111..1191667 1 NC_017341.1 C4-dicarboxylate anaerobic carrier 1191667 12331037 SAA6008_01123 Staphylococcus aureus subsp. aureus str. JKD6008 C4-dicarboxylate anaerobic carrier YP_005744483.1 1190111 D 546342 CDS YP_005744484.1 384861764 12331038 1192062..1192202 1 NC_017341.1 hypothetical protein 1192202 12331038 SAA6008_01124 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744484.1 1192062 D 546342 CDS YP_005744485.1 384861765 12331039 complement(1192507..1193454) 1 NC_017341.1 C4-dicarboxylate transporter/malic acid transport protein 1193454 eta 12331039 eta Staphylococcus aureus subsp. aureus str. JKD6008 C4-dicarboxylate transporter/malic acid transport protein YP_005744485.1 1192507 R 546342 CDS YP_005744486.1 384861766 12331040 1193703..1193891 1 NC_017341.1 putative DNA-binding protein 1193891 12331040 SAA6008_01126 Staphylococcus aureus subsp. aureus str. JKD6008 putative DNA-binding protein YP_005744486.1 1193703 D 546342 CDS YP_005744487.1 384861767 12331042 1194803..1194937 1 NC_017341.1 antibacterial protein (phenol soluble modulin) 1194937 12331042 SAA6008_01127 Staphylococcus aureus subsp. aureus str. JKD6008 antibacterial protein (phenol soluble modulin) YP_005744487.1 1194803 D 546342 CDS YP_005744488.1 384861768 12331043 1194994..1195128 1 NC_017341.1 antibacterial protein (phenol soluble modulin) 1195128 12331043 SAA6008_01128 Staphylococcus aureus subsp. aureus str. JKD6008 antibacterial protein (phenol soluble modulin) YP_005744488.1 1194994 D 546342 CDS YP_005744489.1 384861769 12331044 1195261..1195947 1 NC_017341.1 5'-ribonucleotide phosphohydrolase 1195947 12331044 SAA6008_01129 Staphylococcus aureus subsp. aureus str. JKD6008 5'-ribonucleotide phosphohydrolase YP_005744489.1 1195261 D 546342 CDS YP_005744490.1 384861770 12331045 complement(1196056..1196496) 1 NC_017341.1 acetyltransferase (GNAT) family protein 1196496 12331045 SAA6008_01130 Staphylococcus aureus subsp. aureus str. JKD6008 acetyltransferase (GNAT) family protein YP_005744490.1 1196056 R 546342 CDS YP_005744491.1 384861771 12331046 1196691..1198304 1 NC_017341.1 hypothetical protein 1198304 12331046 SAA6008_01131 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744491.1 1196691 D 546342 CDS YP_005744492.1 384861772 12331047 1198448..1198879 1 NC_017341.1 cell division protein MraZ 1198879 mraZ 12331047 mraZ Staphylococcus aureus subsp. aureus str. JKD6008 cell division protein MraZ YP_005744492.1 1198448 D 546342 CDS YP_005744493.1 384861773 12331048 1198916..1199830 1 NC_017341.1 S-adenosyl-methyltransferase MraW 1199830 mraW 12331048 mraW Staphylococcus aureus subsp. aureus str. JKD6008 S-adenosyl-methyltransferase MraW YP_005744493.1 1198916 D 546342 CDS YP_005744494.1 384861774 12331049 1199844..1200245 1 NC_017341.1 cell division and chromosome partitioning protein, FtsL 1200245 ftsL 12331049 ftsL Staphylococcus aureus subsp. aureus str. JKD6008 cell division and chromosome partitioning protein, FtsL YP_005744494.1 1199844 D 546342 CDS YP_005744495.1 384861775 12331050 1200226..1202460 1 NC_017341.1 penicillin-binding protein 1 1202460 pbpA 12331050 pbpA Staphylococcus aureus subsp. aureus str. JKD6008 penicillin-binding protein 1 YP_005744495.1 1200226 D 546342 CDS YP_005744496.1 384861776 12331051 1202752..1203717 1 NC_017341.1 phospho-N-acetylmuramoyl-pentapeptide- transferase 1203717 mraY 12331051 mraY Staphylococcus aureus subsp. aureus str. JKD6008 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_005744496.1 1202752 D 546342 CDS YP_005744497.1 384861777 12331052 1203719..1205068 1 NC_017341.1 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 1205068 murD 12331052 murD Staphylococcus aureus subsp. aureus str. JKD6008 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_005744497.1 1203719 D 546342 CDS YP_005744498.1 384861778 12331053 1205084..1206403 1 NC_017341.1 putative cell division protein 1206403 div1b 12331053 div1b Staphylococcus aureus subsp. aureus str. JKD6008 putative cell division protein YP_005744498.1 1205084 D 546342 CDS YP_005744499.1 384861779 12331054 1206508..1207920 1 NC_017341.1 putative cell division protein 1207920 ftsA 12331054 ftsA Staphylococcus aureus subsp. aureus str. JKD6008 putative cell division protein YP_005744499.1 1206508 D 546342 CDS YP_005744500.1 384861780 12331055 1207953..1209125 1 NC_017341.1 cell division protein FtsZ 1209125 ftsZ 12331055 ftsZ Staphylococcus aureus subsp. aureus str. JKD6008 cell division protein FtsZ YP_005744500.1 1207953 D 546342 CDS YP_005744501.1 384861781 12331056 1209385..1210176 1 NC_017341.1 multi-copper polyphenol oxidoreductase laccase 1210176 12331056 SAA6008_01141 Staphylococcus aureus subsp. aureus str. JKD6008 multi-copper polyphenol oxidoreductase laccase YP_005744501.1 1209385 D 546342 CDS YP_005744502.1 384861782 12331057 1210194..1210868 1 NC_017341.1 alanine racemase 1210868 12331057 SAA6008_01142 Staphylococcus aureus subsp. aureus str. JKD6008 alanine racemase YP_005744502.1 1210194 D 546342 CDS YP_005744503.1 384861783 12331058 1210865..1211428 1 NC_017341.1 cell division-like FtsZ-interacting protein 1211428 sepF 12331058 sepF Staphylococcus aureus subsp. aureus str. JKD6008 cell division-like FtsZ-interacting protein YP_005744503.1 1210865 D 546342 CDS YP_005744504.1 384861784 12331059 1211440..1211730 1 NC_017341.1 hypothetical protein 1211730 ylmG 12331059 ylmG Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744504.1 1211440 D 546342 CDS YP_005744505.1 384861785 12331060 1211813..1212619 1 NC_017341.1 S4 RNA binding domain protein 1212619 12331060 SAA6008_01145 Staphylococcus aureus subsp. aureus str. JKD6008 S4 RNA binding domain protein YP_005744505.1 1211813 D 546342 CDS YP_005744506.1 384861786 12331061 1212643..1213260 1 NC_017341.1 putative cell-division initiation protein 1213260 12331061 SAA6008_01146 Staphylococcus aureus subsp. aureus str. JKD6008 putative cell-division initiation protein YP_005744506.1 1212643 D 546342 CDS YP_005744507.1 384861787 12331062 1213481..1216234 1 NC_017341.1 isoleucyl-tRNA synthetase 1216234 ileS 12331062 ileS Staphylococcus aureus subsp. aureus str. JKD6008 isoleucyl-tRNA synthetase YP_005744507.1 1213481 D 546342 CDS YP_005744508.1 384861788 12331063 1216524..1217321 1 NC_017341.1 glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 1217321 12331063 SAA6008_01148 Staphylococcus aureus subsp. aureus str. JKD6008 glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein YP_005744508.1 1216524 D 546342 CDS YP_005744509.1 384861789 12331065 1218145..1218636 1 NC_017341.1 lipoprotein signal peptidase 1218636 lspA 12331065 lspA Staphylococcus aureus subsp. aureus str. JKD6008 lipoprotein signal peptidase YP_005744509.1 1218145 D 546342 CDS YP_005744510.1 384861790 12331066 1218636..1219553 1 NC_017341.1 RluD subfamily ribosomal large subunit pseudouridine synthase 1219553 rluD 12331066 rluD Staphylococcus aureus subsp. aureus str. JKD6008 RluD subfamily ribosomal large subunit pseudouridine synthase YP_005744510.1 1218636 D 546342 CDS YP_005744511.1 384861791 12331067 1219953..1220480 1 NC_017341.1 regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional protein pyrimidine operon regulatory protein/uracil phosphoribosyltransferase, PyrR 1220480 pyrR 12331067 pyrR Staphylococcus aureus subsp. aureus str. JKD6008 bifunctional protein pyrimidine operon regulatory protein/uracil phosphoribosyltransferase, PyrR YP_005744511.1 1219953 D 546342 CDS YP_005744512.1 384861792 12331068 1220698..1222005 1 NC_017341.1 uracil permease 1222005 uraA 12331068 uraA Staphylococcus aureus subsp. aureus str. JKD6008 uracil permease YP_005744512.1 1220698 D 546342 CDS YP_005744513.1 384861793 12331069 1222033..1222914 1 NC_017341.1 aspartate carbamoyltransferase catalytic subunit 1222914 pyrB 12331069 pyrB Staphylococcus aureus subsp. aureus str. JKD6008 aspartate carbamoyltransferase catalytic subunit YP_005744513.1 1222033 D 546342 CDS YP_005744514.1 384861794 12331070 1222929..1224206 1 NC_017341.1 putative dihydroorotase 1224206 pyrC 12331070 pyrC Staphylococcus aureus subsp. aureus str. JKD6008 putative dihydroorotase YP_005744514.1 1222929 D 546342 CDS YP_005744515.1 384861795 12331071 1224208..1225308 1 NC_017341.1 putative carbamoyl-phosphate synthase, pyrimidine-specific, small chain 1225308 pyrAA 12331071 pyrAA Staphylococcus aureus subsp. aureus str. JKD6008 putative carbamoyl-phosphate synthase, pyrimidine-specific, small chain YP_005744515.1 1224208 D 546342 CDS YP_005744516.1 384861796 12331072 1225301..1228474 1 NC_017341.1 putative carbamoyl-phosphate synthase, pyrimidine-specific, large chain 1228474 carB 12331072 carB Staphylococcus aureus subsp. aureus str. JKD6008 putative carbamoyl-phosphate synthase, pyrimidine-specific, large chain YP_005744516.1 1225301 D 546342 CDS YP_005744517.1 384861797 12331073 1228581..1229276 1 NC_017341.1 putative orotidine 5'-phosphate decarboxylase 1229276 pyrF 12331073 pyrF Staphylococcus aureus subsp. aureus str. JKD6008 putative orotidine 5'-phosphate decarboxylase YP_005744517.1 1228581 D 546342 CDS YP_005744518.1 384861798 12331074 1229276..1229887 1 NC_017341.1 putative orotate phosphoribosyltransferase 1229887 pyrE 12331074 pyrE Staphylococcus aureus subsp. aureus str. JKD6008 putative orotate phosphoribosyltransferase YP_005744518.1 1229276 D 546342 CDS YP_005744519.1 384861799 12331075 1229917..1230129 1 NC_017341.1 hypothetical protein 1230129 12331075 SAA6008_01160 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744519.1 1229917 D 546342 CDS YP_005744520.1 384861800 12331076 1230566..1230967 1 NC_017341.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase 1230967 12331076 SAA6008_01161 Staphylococcus aureus subsp. aureus str. JKD6008 3-demethylubiquinone-9 3-methyltransferase YP_005744520.1 1230566 D 546342 CDS YP_005744521.1 384861801 12331077 complement(1231041..1231154) 1 NC_017341.1 hypothetical protein 1231154 12331077 SAA6008_01162 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744521.1 1231041 R 546342 CDS YP_005744522.1 384861802 12331078 complement(1231230..1232927) 1 NC_017341.1 putative fibronectin/fibrinogen binding protein 1232927 fbpA 12331078 fbpA Staphylococcus aureus subsp. aureus str. JKD6008 putative fibronectin/fibrinogen binding protein YP_005744522.1 1231230 R 546342 CDS YP_005744523.1 384861803 12331079 1233202..1233825 1 NC_017341.1 guanylate kinase 1233825 gmk 12331079 gmk Staphylococcus aureus subsp. aureus str. JKD6008 guanylate kinase YP_005744523.1 1233202 D 546342 CDS YP_005744524.1 384861804 12331080 1233825..1234043 1 NC_017341.1 DNA-directed RNA polymerase subunit omega 1234043 rpoZ 12331080 rpoZ Staphylococcus aureus subsp. aureus str. JKD6008 DNA-directed RNA polymerase subunit omega YP_005744524.1 1233825 D 546342 CDS YP_005744525.1 384861805 12331081 1234259..1235458 1 NC_017341.1 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 1235458 coaBC 12331081 coaBC Staphylococcus aureus subsp. aureus str. JKD6008 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase YP_005744525.1 1234259 D 546342 CDS YP_005744526.1 384861806 12331082 1235458..1237866 1 NC_017341.1 primosomal protein N prime 1237866 priA 12331082 priA Staphylococcus aureus subsp. aureus str. JKD6008 primosomal protein N prime YP_005744526.1 1235458 D 546342 CDS YP_005744527.1 384861807 12331083 1238372..1239325 1 NC_017341.1 hypothetical protein 1239325 12331083 SAA6008_01168 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744527.1 1238372 D 546342 CDS YP_005744528.1 384861808 12331084 complement(1239488..1239766) 1 NC_017341.1 TM2 domain containing membrane protein+B7201 1239766 xynA 12331084 xynA Staphylococcus aureus subsp. aureus str. JKD6008 TM2 domain containing membrane protein+B7201 YP_005744528.1 1239488 R 546342 CDS YP_005744529.1 384861809 12328875 1239990..1240478 1 NC_017341.1 putative polypeptide deformylase 1240478 def2 12328875 def2 Staphylococcus aureus subsp. aureus str. JKD6008 putative polypeptide deformylase YP_005744529.1 1239990 D 546342 CDS YP_005744530.1 384861810 12328876 1240471..1241406 1 NC_017341.1 methionyl-tRNA formyltransferase 1241406 fmt 12328876 fmt Staphylococcus aureus subsp. aureus str. JKD6008 methionyl-tRNA formyltransferase YP_005744530.1 1240471 D 546342 CDS YP_005744531.1 384861811 12328877 1241403..1242710 1 NC_017341.1 ribosomal RNA small subunit methyltransferase B 1242710 sun 12328877 sun Staphylococcus aureus subsp. aureus str. JKD6008 ribosomal RNA small subunit methyltransferase B YP_005744531.1 1241403 D 546342 CDS YP_005744532.1 384861812 12328878 1242713..1243807 1 NC_017341.1 Ribosomal RNA large subunit methyltransferase N, Rlmn 1243807 rlmN 12328878 rlmN Staphylococcus aureus subsp. aureus str. JKD6008 Ribosomal RNA large subunit methyltransferase N, Rlmn YP_005744532.1 1242713 D 546342 CDS YP_005744533.1 384861813 12328879 1243814..1244557 1 NC_017341.1 protein phosphatase 2C domain-containing protein 1244557 12328879 SAA6008_01174 Staphylococcus aureus subsp. aureus str. JKD6008 protein phosphatase 2C domain-containing protein YP_005744533.1 1243814 D 546342 CDS YP_005744534.1 384861814 12328880 1244554..1246548 1 NC_017341.1 non-specific serine/threonine protein kinase 1246548 pknB 12328880 pknB Staphylococcus aureus subsp. aureus str. JKD6008 non-specific serine/threonine protein kinase YP_005744534.1 1244554 D 546342 CDS YP_005744535.1 384861815 12328881 1246776..1247651 1 NC_017341.1 ribosome small subunit-dependent GTPase A 1247651 rsgA 12328881 rsgA Staphylococcus aureus subsp. aureus str. JKD6008 ribosome small subunit-dependent GTPase A YP_005744535.1 1246776 D 546342 CDS YP_005744536.1 384861816 12328882 1247652..1248296 1 NC_017341.1 ribulose-phosphate 3-epimerase 1248296 rpe 12328882 rpe Staphylococcus aureus subsp. aureus str. JKD6008 ribulose-phosphate 3-epimerase YP_005744536.1 1247652 D 546342 CDS YP_005744537.1 384861817 12328883 1248303..1248944 1 NC_017341.1 putative thiamine pyrophosphokinase 1248944 thiN 12328883 thiN Staphylococcus aureus subsp. aureus str. JKD6008 putative thiamine pyrophosphokinase YP_005744537.1 1248303 D 546342 CDS YP_005744538.1 384861818 12328884 complement(1249325..1249513) 1 NC_017341.1 50S ribosomal protein L28 1249513 rpmB 12328884 rpmB Staphylococcus aureus subsp. aureus str. JKD6008 50S ribosomal protein L28 YP_005744538.1 1249325 R 546342 CDS YP_005744539.1 384861819 12328885 1249956..1250330 1 NC_017341.1 PFAM: protein of unknown function DUF322 KEGG: sao:SAOUHSC_01192 hypothetical protein; hypothetical protein 1250330 12328885 SAA6008_01180 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744539.1 1249956 D 546342 CDS YP_005744540.1 384861820 12328886 1250345..1251991 1 NC_017341.1 dihydroxyacetone kinase family protein 1251991 12328886 SAA6008_01181 Staphylococcus aureus subsp. aureus str. JKD6008 dihydroxyacetone kinase family protein YP_005744540.1 1250345 D 546342 CDS YP_005744541.1 384861821 12328887 1252181..1254241 1 NC_017341.1 ATP-dependent DNA helicase RecG 1254241 recG 12328887 recG Staphylococcus aureus subsp. aureus str. JKD6008 ATP-dependent DNA helicase RecG YP_005744541.1 1252181 D 546342 CDS YP_005744542.1 384861822 12328888 1254444..1255016 1 NC_017341.1 fatty acid biosynthesis transcriptional regulator 1255016 fapR 12328888 fapR Staphylococcus aureus subsp. aureus str. JKD6008 fatty acid biosynthesis transcriptional regulator YP_005744542.1 1254444 D 546342 CDS YP_005744543.1 384861823 12328889 1255021..1256007 1 NC_017341.1 poorly understood protein involved in fatty acid and phospholipid biosynthesis; glycerol-3-phosphate acyltransferase PlsX 1256007 plsX 12328889 plsX Staphylococcus aureus subsp. aureus str. JKD6008 glycerol-3-phosphate acyltransferase PlsX YP_005744543.1 1255021 D 546342 CDS YP_005744544.1 384861824 12328890 1255991..1256926 1 NC_017341.1 putative malonyl CoA-acyl carrier protein transacylase 1256926 fabD 12328890 fabD Staphylococcus aureus subsp. aureus str. JKD6008 putative malonyl CoA-acyl carrier protein transacylase YP_005744544.1 1255991 D 546342 CDS YP_005744545.1 384861825 12328891 1256919..1257653 1 NC_017341.1 3-oxoacyl-ACP reductase 1257653 fabG 12328891 fabG Staphylococcus aureus subsp. aureus str. JKD6008 3-oxoacyl-ACP reductase YP_005744545.1 1256919 D 546342 CDS YP_005744546.1 384861826 12328892 1257896..1258129 1 NC_017341.1 acyl carrier protein 1258129 acpP 12328892 acpP Staphylococcus aureus subsp. aureus str. JKD6008 acyl carrier protein YP_005744546.1 1257896 D 546342 CDS YP_005744547.1 384861827 12328893 1258245..1258976 1 NC_017341.1 putative ribonuclease III 1258976 rnc 12328893 rnc Staphylococcus aureus subsp. aureus str. JKD6008 putative ribonuclease III YP_005744547.1 1258245 D 546342 CDS YP_005744548.1 384861828 12328894 1259123..1262689 1 NC_017341.1 SMC superfamily ATP-binding chromosome segregation protein 1262689 smc 12328894 smc Staphylococcus aureus subsp. aureus str. JKD6008 SMC superfamily ATP-binding chromosome segregation protein YP_005744548.1 1259123 D 546342 CDS YP_005744549.1 384861829 12328895 1262689..1263939 1 NC_017341.1 cell division protein FtsY 1263939 ftsY 12328895 ftsY Staphylococcus aureus subsp. aureus str. JKD6008 cell division protein FtsY YP_005744549.1 1262689 D 546342 CDS YP_005744550.1 384861830 12328896 1263926..1264258 1 NC_017341.1 putative DNA-binding protein 1264258 12328896 SAA6008_01191 Staphylococcus aureus subsp. aureus str. JKD6008 putative DNA-binding protein YP_005744550.1 1263926 D 546342 CDS YP_005744551.1 384861831 12328897 1264284..1265651 1 NC_017341.1 signal recognition particle protein 1265651 12328897 SAA6008_01192 Staphylococcus aureus subsp. aureus str. JKD6008 signal recognition particle protein YP_005744551.1 1264284 D 546342 CDS YP_005744552.1 384861832 12328898 1266086..1266361 1 NC_017341.1 30S ribosomal protein S16 1266361 rpsP 12328898 rpsP Staphylococcus aureus subsp. aureus str. JKD6008 30S ribosomal protein S16 YP_005744552.1 1266086 D 546342 CDS YP_005744553.1 384861833 12328899 1266549..1267052 1 NC_017341.1 16S rRNA processing protein RimM 1267052 rimM 12328899 rimM Staphylococcus aureus subsp. aureus str. JKD6008 16S rRNA processing protein RimM YP_005744553.1 1266549 D 546342 CDS YP_005744554.1 384861834 12328900 1267052..1267789 1 NC_017341.1 putative tRNA (guanine-7-)-methyltransferase 1267789 trmD 12328900 trmD Staphylococcus aureus subsp. aureus str. JKD6008 putative tRNA (guanine-7-)-methyltransferase YP_005744554.1 1267052 D 546342 CDS YP_005744555.1 384861835 12328901 1267892..1268242 1 NC_017341.1 50S ribosomal protein L19 1268242 rplS 12328901 rplS Staphylococcus aureus subsp. aureus str. JKD6008 50S ribosomal protein L19 YP_005744555.1 1267892 D 546342 CDS YP_005744556.1 384861836 12328902 complement(1268486..1271113) 1 NC_017341.1 putative membrane protein YfhO 1271113 yfhO 12328902 yfhO Staphylococcus aureus subsp. aureus str. JKD6008 putative membrane protein YfhO YP_005744556.1 1268486 R 546342 CDS YP_005744557.1 384861837 12328903 1271520..1272377 1 NC_017341.1 putative GTP-binding protein 1272377 rbgA 12328903 rbgA Staphylococcus aureus subsp. aureus str. JKD6008 putative GTP-binding protein YP_005744557.1 1271520 D 546342 CDS YP_005744558.1 384861838 12328904 1272361..1273128 1 NC_017341.1 putative ribonuclease HII 1273128 rnhB 12328904 rnhB Staphylococcus aureus subsp. aureus str. JKD6008 putative ribonuclease HII YP_005744558.1 1272361 D 546342 CDS YP_005744559.1 384861839 12328905 1273237..1274403 1 NC_017341.1 succinate--CoA ligase (ADP-forming) beta subunit 1274403 sucC 12328905 sucC Staphylococcus aureus subsp. aureus str. JKD6008 succinate--CoA ligase (ADP-forming) beta subunit YP_005744559.1 1273237 D 546342 CDS YP_005744560.1 384861840 12328906 1274425..1275333 1 NC_017341.1 succinate--CoA ligase (ADP-forming) alpha subunit 1275333 sucD 12328906 sucD Staphylococcus aureus subsp. aureus str. JKD6008 succinate--CoA ligase (ADP-forming) alpha subunit YP_005744560.1 1274425 D 546342 CDS YP_005744561.1 384861841 12328907 1275560..1276678 1 NC_017341.1 C51 family D-Ala-D-Gly carboxypeptidase 1276678 lytN 12328907 lytN Staphylococcus aureus subsp. aureus str. JKD6008 C51 family D-Ala-D-Gly carboxypeptidase YP_005744561.1 1275560 D 546342 CDS YP_005744562.1 384861842 12328908 1276706..1277950 1 NC_017341.1 FemAB family peptidoglycan biosynthesis protein 1277950 fmhC 12328908 fmhC Staphylococcus aureus subsp. aureus str. JKD6008 FemAB family peptidoglycan biosynthesis protein YP_005744562.1 1276706 D 546342 CDS YP_005744563.1 384861843 12328909 1278123..1278995 1 NC_017341.1 DNA recombination-mediator protein 1278995 12328909 SAA6008_01204 Staphylococcus aureus subsp. aureus str. JKD6008 DNA recombination-mediator protein YP_005744563.1 1278123 D 546342 CDS YP_005744564.1 384861844 12328910 1279169..1281244 1 NC_017341.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 1281244 topA 12328910 topA Staphylococcus aureus subsp. aureus str. JKD6008 DNA topoisomerase I YP_005744564.1 1279169 D 546342 CDS YP_005744565.1 384861845 12328911 1281400..1282707 1 NC_017341.1 tRNA (uracil-5-)-methyltransferase Gid 1282707 gid 12328911 gid Staphylococcus aureus subsp. aureus str. JKD6008 tRNA (uracil-5-)-methyltransferase Gid YP_005744565.1 1281400 D 546342 CDS YP_005744566.1 384861846 12328912 1283124..1284020 1 NC_017341.1 site-specific recombinase XerC 1284020 xerC 12328912 xerC Staphylococcus aureus subsp. aureus str. JKD6008 site-specific recombinase XerC YP_005744566.1 1283124 D 546342 CDS YP_005744567.1 384861847 12328913 1284017..1284562 1 NC_017341.1 T01 family HslV component of HsIUV peptidase 1284562 clpQ 12328913 clpQ Staphylococcus aureus subsp. aureus str. JKD6008 T01 family HslV component of HsIUV peptidase YP_005744567.1 1284017 D 546342 CDS YP_005744568.1 384861848 12328914 1284619..1286031 1 NC_017341.1 putative ATP-dependent protease ATP-binding subunit 1286031 hslU 12328914 hslU Staphylococcus aureus subsp. aureus str. JKD6008 putative ATP-dependent protease ATP-binding subunit YP_005744568.1 1284619 D 546342 CDS YP_005744569.1 384861849 12328915 1286056..1286829 1 NC_017341.1 GTP-sensing transcriptional pleiotropic repressor CodY 1286829 codY 12328915 codY Staphylococcus aureus subsp. aureus str. JKD6008 GTP-sensing transcriptional pleiotropic repressor CodY YP_005744569.1 1286056 D 546342 CDS YP_005744570.1 384861850 12328916 1287171..1287938 1 NC_017341.1 30S ribosomal protein S2 1287938 rpsB 12328916 rpsB Staphylococcus aureus subsp. aureus str. JKD6008 30S ribosomal protein S2 YP_005744570.1 1287171 D 546342 CDS YP_005744571.1 384861851 12328917 1288120..1289001 1 NC_017341.1 translation elongation factor Ts 1289001 tsf 12328917 tsf Staphylococcus aureus subsp. aureus str. JKD6008 translation elongation factor Ts YP_005744571.1 1288120 D 546342 CDS YP_005744572.1 384861852 12328918 1289138..1289860 1 NC_017341.1 putative uridylate kinase 1289860 smbA 12328918 smbA Staphylococcus aureus subsp. aureus str. JKD6008 putative uridylate kinase YP_005744572.1 1289138 D 546342 CDS YP_005744573.1 384861853 12328919 1289879..1290433 1 NC_017341.1 ribosome recycling factor 1290433 frr 12328919 frr Staphylococcus aureus subsp. aureus str. JKD6008 ribosome recycling factor YP_005744573.1 1289879 D 546342 CDS YP_005744574.1 384861854 12328920 1290806..1291576 1 NC_017341.1 di-trans, poly-cis-decaprenylcistransferase 1291576 uppS 12328920 uppS Staphylococcus aureus subsp. aureus str. JKD6008 di-trans, poly-cis-decaprenylcistransferase YP_005744574.1 1290806 D 546342 CDS YP_005744575.1 384861855 12328921 1291583..1292365 1 NC_017341.1 putative phosphatidate cytidylyltransferase 1292365 cdsA 12328921 cdsA Staphylococcus aureus subsp. aureus str. JKD6008 putative phosphatidate cytidylyltransferase YP_005744575.1 1291583 D 546342 CDS YP_005744576.1 384861856 12328922 1292577..1293863 1 NC_017341.1 membrane-associated zinc metalloprotease 1293863 12328922 SAA6008_01217 Staphylococcus aureus subsp. aureus str. JKD6008 membrane-associated zinc metalloprotease YP_005744576.1 1292577 D 546342 CDS YP_005744577.1 384861857 12328923 1293883..1295586 1 NC_017341.1 prolyl-tRNA synthetase 1295586 proS 12328923 proS Staphylococcus aureus subsp. aureus str. JKD6008 prolyl-tRNA synthetase YP_005744577.1 1293883 D 546342 CDS YP_005744578.1 384861858 12328924 1295844..1300160 1 NC_017341.1 DNA polymerase III subunit alpha 1300160 polC 12328924 polC Staphylococcus aureus subsp. aureus str. JKD6008 DNA polymerase III subunit alpha YP_005744578.1 1295844 D 546342 CDS YP_005744579.1 384861859 12328925 1300450..1300917 1 NC_017341.1 hypothetical protein 1300917 12328925 SAA6008_01220 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744579.1 1300450 D 546342 CDS YP_005744580.1 384861860 12328926 1300938..1302113 1 NC_017341.1 transcription termination-antitermination factor 1302113 nusA 12328926 nusA Staphylococcus aureus subsp. aureus str. JKD6008 transcription termination-antitermination factor YP_005744580.1 1300938 D 546342 CDS YP_005744581.1 384861861 12328927 1302134..1302418 1 NC_017341.1 hypothetical protein 1302418 12328927 SAA6008_01222 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744581.1 1302134 D 546342 CDS YP_005744582.1 384861862 12328928 1302415..1302732 1 NC_017341.1 PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45 KEGG: sao:SAOUHSC_01245 hypothetical protein; ribosomal protein L7AE family 1302732 rpl7AE 12328928 rpl7AE Staphylococcus aureus subsp. aureus str. JKD6008 ribosomal protein L7AE family YP_005744582.1 1302415 D 546342 CDS YP_005744583.1 384861863 12328929 1302713..1304854 1 NC_017341.1 translation initiation factor IF-2 1304854 infB 12328929 infB Staphylococcus aureus subsp. aureus str. JKD6008 translation initiation factor IF-2 YP_005744583.1 1302713 D 546342 CDS YP_005744584.1 384861864 12328930 1305198..1305590 1 NC_017341.1 ribosome-binding factor A (P15B PROTEIN) 1305590 rbfA 12328930 rbfA Staphylococcus aureus subsp. aureus str. JKD6008 ribosome-binding factor A (P15B PROTEIN) YP_005744584.1 1305198 D 546342 CDS YP_005744585.1 384861865 12328931 1305759..1306676 1 NC_017341.1 putative tRNA pseudouridine synthase B 1306676 truB 12328931 truB Staphylococcus aureus subsp. aureus str. JKD6008 putative tRNA pseudouridine synthase B YP_005744585.1 1305759 D 546342 CDS YP_005744586.1 384861866 12328932 1306691..1307662 1 NC_017341.1 bifunctional protein including riboflavin kinase and FAD synthase 1307662 ribC 12328932 ribC Staphylococcus aureus subsp. aureus str. JKD6008 bifunctional protein including riboflavin kinase and FAD synthase YP_005744586.1 1306691 D 546342 CDS YP_005744587.1 384861867 12328933 1307777..1308046 1 NC_017341.1 30S ribosomal protein S15 1308046 rpsO 12328933 rpsO Staphylococcus aureus subsp. aureus str. JKD6008 30S ribosomal protein S15 YP_005744587.1 1307777 D 546342 CDS YP_005744588.1 384861868 12328934 1308418..1310514 1 NC_017341.1 polynucleotide phosphorylase/polyadenylase 1310514 pnpA 12328934 pnpA Staphylococcus aureus subsp. aureus str. JKD6008 polynucleotide phosphorylase/polyadenylase YP_005744588.1 1308418 D 546342 CDS YP_005744589.1 384861869 12328935 1310750..1312423 1 NC_017341.1 metallo-beta-lactamase family protein 1312423 12328935 SAA6008_01230 Staphylococcus aureus subsp. aureus str. JKD6008 metallo-beta-lactamase family protein YP_005744589.1 1310750 D 546342 CDS YP_005744590.1 384861870 12328936 1312679..1315048 1 NC_017341.1 PFAM: cell division protein FtsK/SpoIIIE SMART: AAA ATPase KEGG: sav:SAV1276 sporulation-related protein SpoIIIE homologue; DNA translocase FtsK/SpoIIIE family protein 1315048 ftsK 12328936 ftsK Staphylococcus aureus subsp. aureus str. JKD6008 DNA translocase FtsK/SpoIIIE family protein YP_005744590.1 1312679 D 546342 CDS YP_005744591.1 384861871 12328938 1315797..1317062 1 NC_017341.1 PFAM: peptidase M16 domain protein KEGG: sao:SAOUHSC_01255 hypothetical protein; processing proteinase-like protein, pqqL 1317062 12328938 SAA6008_01233 Staphylococcus aureus subsp. aureus str. JKD6008 processing proteinase-like protein, pqqL YP_005744591.1 1315797 D 546342 CDS YP_005744592.1 384861872 12328939 1317062..1318348 1 NC_017341.1 zinc-dependent peptidase, M16 family 1318348 12328939 SAA6008_01234 Staphylococcus aureus subsp. aureus str. JKD6008 zinc-dependent peptidase, M16 family YP_005744592.1 1317062 D 546342 CDS YP_005744593.1 384861873 12328940 1318348..1319052 1 NC_017341.1 putative 3-oxoacyl-acyl carrier protein reductase 1319052 12328940 SAA6008_01235 Staphylococcus aureus subsp. aureus str. JKD6008 putative 3-oxoacyl-acyl carrier protein reductase YP_005744593.1 1318348 D 546342 CDS YP_005744594.1 384861874 12328941 1319157..1319984 1 NC_017341.1 amino acid-binding ACT protein 1319984 12328941 SAA6008_01236 Staphylococcus aureus subsp. aureus str. JKD6008 amino acid-binding ACT protein YP_005744594.1 1319157 D 546342 CDS YP_005744595.1 384861875 12328942 1320003..1320395 1 NC_017341.1 Cro/CI family transcriptional regulator 1320395 12328942 SAA6008_01237 Staphylococcus aureus subsp. aureus str. JKD6008 Cro/CI family transcriptional regulator YP_005744595.1 1320003 D 546342 CDS YP_005744596.1 384861876 12328943 1320465..1321007 1 NC_017341.1 putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1321007 pgsA 12328943 pgsA Staphylococcus aureus subsp. aureus str. JKD6008 putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_005744596.1 1320465 D 546342 CDS YP_005744597.1 384861877 12328944 1321234..1322385 1 NC_017341.1 competence/damage-inducible protein cinA 1322385 cinA 12328944 cinA Staphylococcus aureus subsp. aureus str. JKD6008 competence/damage-inducible protein cinA YP_005744597.1 1321234 D 546342 CDS YP_005744598.1 384861878 12328945 1322550..1323593 1 NC_017341.1 recombination protein RecA 1323593 recA 12328945 recA Staphylococcus aureus subsp. aureus str. JKD6008 recombination protein RecA YP_005744598.1 1322550 D 546342 CDS YP_005744599.1 384861879 12328946 1323947..1325506 1 NC_017341.1 phosphodiesterase 1325506 12328946 SAA6008_01241 Staphylococcus aureus subsp. aureus str. JKD6008 phosphodiesterase YP_005744599.1 1323947 D 546342 CDS YP_005744600.1 384861880 12328947 complement(1325803..1326018) 1 NC_017341.1 hypothetical protein 1326018 12328947 SAA6008_01242 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744600.1 1325803 R 546342 CDS YP_005744601.1 384861881 12328948 1326201..1326989 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, binding protein 1326989 12328948 SAA6008_01243 Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, binding protein YP_005744601.1 1326201 D 546342 CDS YP_005744602.1 384861882 12328949 1327129..1328889 1 NC_017341.1 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 1328889 porA 12328949 porA Staphylococcus aureus subsp. aureus str. JKD6008 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_005744602.1 1327129 D 546342 CDS YP_005744603.1 384861883 12328950 1328890..1329756 1 NC_017341.1 2-oxoglutarate ferredoxin oxidoreductase subunit beta 1329756 porB 12328950 porB Staphylococcus aureus subsp. aureus str. JKD6008 2-oxoglutarate ferredoxin oxidoreductase subunit beta YP_005744603.1 1328890 D 546342 CDS YP_005744604.1 384861884 12328951 1329850..1330143 1 NC_017341.1 hypothetical protein 1330143 12328951 SAA6008_01246 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744604.1 1329850 D 546342 CDS YP_005744605.1 384861885 12328952 1330277..1331821 1 NC_017341.1 (dimethylallyl)adenosine tRNA methylthiotransferase 1331821 miaB 12328952 miaB Staphylococcus aureus subsp. aureus str. JKD6008 (dimethylallyl)adenosine tRNA methylthiotransferase YP_005744605.1 1330277 D 546342 CDS YP_005744606.1 384861886 12328953 1331822..1332187 1 NC_017341.1 hypothetical protein 1332187 12328953 SAA6008_01248 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744606.1 1331822 D 546342 CDS YP_005744607.1 384861887 12328954 1332214..1332705 1 NC_017341.1 putative thiamine-precursor transporter protein (ThiW) 1332705 12328954 SAA6008_01249 Staphylococcus aureus subsp. aureus str. JKD6008 putative thiamine-precursor transporter protein (ThiW) YP_005744607.1 1332214 D 546342 CDS YP_005744608.1 384861888 12328955 1333008..1335626 1 NC_017341.1 DNA mismatch repair protein MutS 1335626 mutS 12328955 mutS Staphylococcus aureus subsp. aureus str. JKD6008 DNA mismatch repair protein MutS YP_005744608.1 1333008 D 546342 CDS YP_005744609.1 384861889 12328956 1335639..1337648 1 NC_017341.1 DNA mismatch repair protein MutL 1337648 mutL 12328956 mutL Staphylococcus aureus subsp. aureus str. JKD6008 DNA mismatch repair protein MutL YP_005744609.1 1335639 D 546342 CDS YP_005744610.1 384861890 12328957 1337654..1338196 1 NC_017341.1 PFAM: glycerol-3-phosphate responsive antiterminator KEGG: sao:SAOUHSC_01274 glycerol uptake operon antiterminator regulatory protein, putative; putative glycerol uptake operon antiterminator regulatory protein, GlpP 1338196 glpP 12328957 glpP Staphylococcus aureus subsp. aureus str. JKD6008 putative glycerol uptake operon antiterminator regulatory protein, GlpP YP_005744610.1 1337654 D 546342 CDS YP_005744611.1 384861891 12328958 1338661..1339479 1 NC_017341.1 MIP family major intrinsic protein channel protein 1339479 glpF 12328958 glpF Staphylococcus aureus subsp. aureus str. JKD6008 MIP family major intrinsic protein channel protein YP_005744611.1 1338661 D 546342 CDS YP_005744612.1 384861892 12328959 1339608..1341104 1 NC_017341.1 glycerol kinase 1341104 glpK 12328959 glpK Staphylococcus aureus subsp. aureus str. JKD6008 glycerol kinase YP_005744612.1 1339608 D 546342 CDS YP_005744613.1 384861893 12328960 1341262..1342935 1 NC_017341.1 DNA-directed DNA polymerase III subunit gamma and tau 1342935 glpD 12328960 glpD Staphylococcus aureus subsp. aureus str. JKD6008 DNA-directed DNA polymerase III subunit gamma and tau YP_005744613.1 1341262 D 546342 CDS YP_005744614.1 384861894 12328961 1343082..1343999 1 NC_017341.1 alpha/beta hydrolase 1343999 12328961 SAA6008_01256 Staphylococcus aureus subsp. aureus str. JKD6008 alpha/beta hydrolase YP_005744614.1 1343082 D 546342 CDS YP_005744615.1 384861895 12328962 1344017..1344952 1 NC_017341.1 putative tRNA delta 2-isopentenylpyrophosphate transferase 1344952 miaA 12328962 miaA Staphylococcus aureus subsp. aureus str. JKD6008 putative tRNA delta 2-isopentenylpyrophosphate transferase YP_005744615.1 1344017 D 546342 CDS YP_005744616.1 384861896 12328963 1344967..1345200 1 NC_017341.1 RNA chaperone, host factor-1 protein 1345200 hfq 12328963 hfq Staphylococcus aureus subsp. aureus str. JKD6008 RNA chaperone, host factor-1 protein YP_005744616.1 1344967 D 546342 CDS YP_005744617.1 384861897 12328964 complement(1345422..1345898) 1 NC_017341.1 putative glutathione peroxidase 1345898 bsaA 12328964 bsaA Staphylococcus aureus subsp. aureus str. JKD6008 putative glutathione peroxidase YP_005744617.1 1345422 R 546342 CDS YP_005744618.1 384861898 12328965 1346010..1347248 1 NC_017341.1 contains a Restriction endonuclease domain (PFAM:PF04471.5) also; GTPase HflX 1347248 hflX 12328965 hflX Staphylococcus aureus subsp. aureus str. JKD6008 GTPase HflX YP_005744618.1 1346010 D 546342 CDS YP_005744619.1 384861899 12328966 1347267..1348505 1 NC_017341.1 cystathionine beta-lyase aluminum resistance protein 1348505 12328966 SAA6008_01261 Staphylococcus aureus subsp. aureus str. JKD6008 cystathionine beta-lyase aluminum resistance protein YP_005744619.1 1347267 D 546342 CDS YP_005744620.1 384861900 12328967 1348778..1349116 1 NC_017341.1 MerR family transcriptional regulator 1349116 glnR 12328967 glnR Staphylococcus aureus subsp. aureus str. JKD6008 MerR family transcriptional regulator YP_005744620.1 1348778 D 546342 CDS YP_005744621.1 384861901 12328968 1349135..1350475 1 NC_017341.1 glutamine synthetase, type I 1350475 glnA 12328968 glnA Staphylococcus aureus subsp. aureus str. JKD6008 glutamine synthetase, type I YP_005744621.1 1349135 D 546342 CDS YP_005744622.1 384861902 12328969 1350968..1351165 1 NC_017341.1 hypothetical protein 1351165 12328969 SAA6008_01264 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744622.1 1350968 D 546342 CDS YP_005744623.1 384861903 12328970 1351866..1352078 1 NC_017341.1 hypothetical protein 1352078 12328970 SAA6008_01265 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744623.1 1351866 D 546342 CDS YP_005744624.1 384861904 12328971 1352371..1352577 1 NC_017341.1 hypothetical protein 1352577 12328971 SAA6008_01266 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744624.1 1352371 D 546342 CDS YP_005744625.1 384861905 12328972 complement(1353033..1354205) 1 NC_017341.1 transposase for IS256 1354205 12328972 SAA6008_01267 Staphylococcus aureus subsp. aureus str. JKD6008 transposase for IS256 YP_005744625.1 1353033 R 546342 CDS YP_005744626.1 384861906 12328973 1354945..1355130 1 NC_017341.1 hypothetical protein 1355130 12328973 SAA6008_01268 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744626.1 1354945 D 546342 CDS YP_005744627.1 384861907 12328974 1355875..1356126 1 NC_017341.1 hypothetical protein 1356126 12328974 SAA6008_01269 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744627.1 1355875 D 546342 CDS YP_005744628.1 384861908 12328975 1356172..1356756 1 NC_017341.1 putative phage head morphogenesis protein 1356756 12328975 SAA6008_01270 Staphylococcus aureus subsp. aureus str. JKD6008 putative phage head morphogenesis protein YP_005744628.1 1356172 D 546342 CDS YP_005744629.1 384861909 12328976 1356877..1357125 1 NC_017341.1 hypothetical protein 1357125 12328976 SAA6008_01271 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744629.1 1356877 D 546342 CDS YP_005744630.1 384861910 12328977 1357160..1357282 1 NC_017341.1 hypothetical protein 1357282 12328977 SAA6008_01272 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744630.1 1357160 D 546342 CDS YP_005744631.1 384861911 12328978 1357552..1357668 1 NC_017341.1 hypothetical protein 1357668 12328978 SAA6008_01273 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744631.1 1357552 D 546342 CDS YP_005744632.1 384861912 12328979 1357677..1357802 1 NC_017341.1 hypothetical protein 1357802 12328979 SAA6008_01274 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744632.1 1357677 D 546342 CDS YP_005744633.1 384861913 12328980 1358005..1358139 1 NC_017341.1 hypothetical protein 1358139 12328980 SAA6008_01275 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744633.1 1358005 D 546342 CDS YP_005744634.1 384861914 12328981 1358231..1358521 1 NC_017341.1 hypothetical protein 1358521 12328981 SAA6008_01276 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744634.1 1358231 D 546342 CDS YP_005744635.1 384861915 12328982 1358532..1358726 1 NC_017341.1 hypothetical protein 1358726 12328982 SAA6008_01277 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744635.1 1358532 D 546342 CDS YP_005744636.1 384861916 12328983 1358767..1359117 1 NC_017341.1 hypothetical protein 1359117 12328983 SAA6008_01278 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744636.1 1358767 D 546342 CDS YP_005744637.1 384861917 12328984 1359124..1359315 1 NC_017341.1 hypothetical protein 1359315 12328984 SAA6008_01279 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744637.1 1359124 D 546342 CDS YP_005744638.1 384861918 12328985 complement(1359864..1360919) 1 NC_017341.1 aromatic amino acid beta-eliminating lyase/threonine aldolase 1360919 gLY1 12328985 gLY1 Staphylococcus aureus subsp. aureus str. JKD6008 aromatic amino acid beta-eliminating lyase/threonine aldolase YP_005744638.1 1359864 R 546342 CDS YP_005744639.1 384861919 12328986 1361159..1361356 1 NC_017341.1 hypothetical protein 1361356 12328986 SAA6008_01281 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744639.1 1361159 D 546342 CDS YP_005744640.1 384861920 12328987 1361414..1362895 1 NC_017341.1 phospholipase D/Transphosphatidylase 1362895 cls1 12328987 cls1 Staphylococcus aureus subsp. aureus str. JKD6008 phospholipase D/Transphosphatidylase YP_005744640.1 1361414 D 546342 CDS YP_005744641.1 384861921 12328988 1363079..1363978 1 NC_017341.1 ABC transporter ATP-binding protein 1363978 12328988 SAA6008_01283 Staphylococcus aureus subsp. aureus str. JKD6008 ABC transporter ATP-binding protein YP_005744641.1 1363079 D 546342 CDS YP_005744642.1 384861922 12328989 1363947..1364678 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, membrane protein 1364678 12328989 SAA6008_01284 Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, membrane protein YP_005744642.1 1363947 D 546342 CDS YP_005744643.1 384861923 12328990 1364682..1365773 1 NC_017341.1 sensor histidine kinase 1365773 12328990 SAA6008_01285 Staphylococcus aureus subsp. aureus str. JKD6008 sensor histidine kinase YP_005744643.1 1364682 D 546342 CDS YP_005744644.1 384861924 12328991 1365770..1366372 1 NC_017341.1 response regulator 1366372 12328991 SAA6008_01286 Staphylococcus aureus subsp. aureus str. JKD6008 response regulator YP_005744644.1 1365770 D 546342 CDS YP_005744645.1 384861925 12328992 complement(1366485..1366673) 1 NC_017341.1 contains two transmembrane domains and possible signal peptide; hypothetical protein 1366673 12328992 SAA6008_01287 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744645.1 1366485 R 546342 CDS YP_005744646.1 384861926 12328993 1366773..1367345 1 NC_017341.1 thermonuclease precursor family protein 1367345 nuc 12328993 nuc Staphylococcus aureus subsp. aureus str. JKD6008 thermonuclease precursor family protein YP_005744646.1 1366773 D 546342 CDS YP_005744647.1 384861927 12328994 complement(1367411..1368583) 1 NC_017341.1 transposase for IS256 1368583 12328994 SAA6008_01289 Staphylococcus aureus subsp. aureus str. JKD6008 transposase for IS256 YP_005744647.1 1367411 R 546342 CDS YP_005744648.1 384861928 12328995 complement(1368820..1369674) 1 NC_017341.1 hypothetical protein 1369674 12328995 SAA6008_01290 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744648.1 1368820 R 546342 CDS YP_005744649.1 384861929 12328996 1369990..1370580 1 NC_017341.1 hypothetical protein 1370580 12328996 SAA6008_01291 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744649.1 1369990 D 546342 CDS YP_005744650.1 384861930 12328997 complement(1370634..1372016) 1 NC_017341.1 putative aspartate kinase 1372016 thrA 12328997 thrA Staphylococcus aureus subsp. aureus str. JKD6008 putative aspartate kinase YP_005744650.1 1370634 R 546342 CDS YP_005744651.1 384861931 12328998 1372207..1373487 1 NC_017341.1 putative homoserine dehydrogenase 1373487 dhoM 12328998 dhoM Staphylococcus aureus subsp. aureus str. JKD6008 putative homoserine dehydrogenase YP_005744651.1 1372207 D 546342 CDS YP_005744652.1 384861932 12328999 1373493..1374554 1 NC_017341.1 threonine synthase 1374554 thrC 12328999 thrC Staphylococcus aureus subsp. aureus str. JKD6008 threonine synthase YP_005744652.1 1373493 D 546342 CDS YP_005744653.1 384861933 12329000 1374556..1375470 1 NC_017341.1 homoserine kinase, ThrB 1375470 thrB 12329000 thrB Staphylococcus aureus subsp. aureus str. JKD6008 homoserine kinase, ThrB YP_005744653.1 1374556 D 546342 CDS YP_005744654.1 384861934 12329001 1375528..1376331 1 NC_017341.1 haloacid dehalogenase-like hydrolase 1376331 12329001 SAA6008_01297 Staphylococcus aureus subsp. aureus str. JKD6008 haloacid dehalogenase-like hydrolase YP_005744654.1 1375528 D 546342 CDS YP_005744655.1 384861935 12329002 complement(1376624..1376938) 1 NC_017341.1 hypothetical protein 1376938 12329002 SAA6008_01298 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744655.1 1376624 R 546342 CDS YP_005744656.1 384861936 12329003 complement(1377156..1378610) 1 NC_017341.1 APC family amino acid-polyamine-organocation transporter 1378610 12329003 SAA6008_01299 Staphylococcus aureus subsp. aureus str. JKD6008 APC family amino acid-polyamine-organocation transporter YP_005744656.1 1377156 R 546342 CDS YP_005744657.1 384861937 12329004 1378814..1380331 1 NC_017341.1 catalase 1380331 katE 12329004 katE Staphylococcus aureus subsp. aureus str. JKD6008 catalase YP_005744657.1 1378814 D 546342 CDS YP_005744658.1 384861938 12329005 1380422..1380571 1 NC_017341.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the; 50S ribosomal protein L33 1380571 rpmG_1 12329005 rpmG_1 Staphylococcus aureus subsp. aureus str. JKD6008 50S ribosomal protein L33 YP_005744658.1 1380422 D 546342 CDS YP_005744659.1 384861939 12329006 1381025..1381294 1 NC_017341.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are presen; 30S ribosomal protein S14 1381294 rpsN_1 12329006 rpsN_1 Staphylococcus aureus subsp. aureus str. JKD6008 30S ribosomal protein S14 YP_005744659.1 1381025 D 546342 CDS YP_005744660.1 384861940 12329007 1381451..1382428 1 NC_017341.1 guanosine 5'-monophosphate oxidoreductase; GMP reductase 1382428 guaC 12329007 guaC Staphylococcus aureus subsp. aureus str. JKD6008 GMP reductase YP_005744660.1 1381451 D 546342 CDS YP_005744661.1 384861941 12329008 1382654..1383466 1 NC_017341.1 hypothetical protein 1383466 12329008 SAA6008_01304 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744661.1 1382654 D 546342 CDS YP_005744662.1 384861942 12329009 complement(1383846..1384469) 1 NC_017341.1 DNA damage-inducible repressor 1384469 lexA 12329009 lexA Staphylococcus aureus subsp. aureus str. JKD6008 DNA damage-inducible repressor YP_005744662.1 1383846 R 546342 CDS YP_005744663.1 384861943 12329010 1384612..1384845 1 NC_017341.1 hypothetical protein 1384845 12329010 SAA6008_01306 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744663.1 1384612 D 546342 CDS YP_005744664.1 384861944 12329011 1384981..1385220 1 NC_017341.1 hypothetical protein 1385220 12329011 SAA6008_01307 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744664.1 1384981 D 546342 CDS YP_005744665.1 384861945 12329012 1385341..1387329 1 NC_017341.1 transketolase 1387329 tktA 12329012 tktA Staphylococcus aureus subsp. aureus str. JKD6008 transketolase YP_005744665.1 1385341 D 546342 CDS YP_005744666.1 384861946 12329013 1387607..1387849 1 NC_017341.1 hypothetical protein 1387849 12329013 SAA6008_01309 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744666.1 1387607 D 546342 CDS YP_005744667.1 384861947 12329014 1388028..1388495 1 NC_017341.1 Membrane protein involved in cytochrome C biogenesis 1388495 ccdC 12329014 ccdC Staphylococcus aureus subsp. aureus str. JKD6008 Membrane protein involved in cytochrome C biogenesis YP_005744667.1 1388028 D 546342 CDS YP_005744668.1 384861948 12329015 1388619..1389740 1 NC_017341.1 DNA repair exonuclease 1389740 sbcD 12329015 sbcD Staphylococcus aureus subsp. aureus str. JKD6008 DNA repair exonuclease YP_005744668.1 1388619 D 546342 CDS YP_005744669.1 384861949 12329016 1389744..1392773 1 NC_017341.1 exonuclease subunit SbcC 1392773 sbcC 12329016 sbcC Staphylococcus aureus subsp. aureus str. JKD6008 exonuclease subunit SbcC YP_005744669.1 1389744 D 546342 CDS YP_005744670.1 384861950 12329017 complement(1392837..1393205) 1 NC_017341.1 large-conductance mechanosensitive channel 1393205 mscL 12329017 mscL Staphylococcus aureus subsp. aureus str. JKD6008 large-conductance mechanosensitive channel YP_005744670.1 1392837 R 546342 CDS YP_005744671.1 384861951 12329018 1393409..1395055 1 NC_017341.1 BCCT family betaine/carnitine/choline transporter 1395055 opuD 12329018 opuD Staphylococcus aureus subsp. aureus str. JKD6008 BCCT family betaine/carnitine/choline transporter YP_005744671.1 1393409 D 546342 CDS YP_005744672.1 384861952 12329019 1395947..1398652 1 NC_017341.1 aconitate hydratase 1398652 citB 12329019 citB Staphylococcus aureus subsp. aureus str. JKD6008 aconitate hydratase YP_005744672.1 1395947 D 546342 CDS YP_005744673.1 384861953 12329020 1398832..1399299 1 NC_017341.1 thioesterase 1399299 12329020 SAA6008_01316 Staphylococcus aureus subsp. aureus str. JKD6008 thioesterase YP_005744673.1 1398832 D 546342 CDS YP_005744674.1 384861954 12329021 complement(1399506..1399802) 1 NC_017341.1 iron-sulfur cluster biosynthesis protein 1399802 12329021 SAA6008_01317 Staphylococcus aureus subsp. aureus str. JKD6008 iron-sulfur cluster biosynthesis protein YP_005744674.1 1399506 R 546342 CDS YP_005744675.1 384861955 12329022 complement(1400178..1400786) 1 NC_017341.1 identified by match to protein family HMM PF02660; match to protein family HMM TIGR00023; hypothetical protein 1400786 12329022 SAA6008_01318 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744675.1 1400178 R 546342 CDS YP_005744676.1 384861956 12329023 1400986..1402983 1 NC_017341.1 TIGRFAM: DNA gyrase, B subunit PFAM: DNA gyrase, subunit B domain protein; ATP-binding region, ATPase domain protein domain protein; TOPRIM domain protein; DNA topoisomerase, type IIA, subunit B, region 2 domain protein SMART: DNA topoisomerase II; DNA topoisomerase subunit B 1402983 gyrB_1 12329023 gyrB_1 Staphylococcus aureus subsp. aureus str. JKD6008 DNA topoisomerase subunit B YP_005744676.1 1400986 D 546342 CDS YP_005744677.1 384861957 12329024 1402983..1405385 1 NC_017341.1 DNA topoisomerase (ATP-hydrolyzing) ParC 1405385 parC 12329024 parC Staphylococcus aureus subsp. aureus str. JKD6008 DNA topoisomerase (ATP-hydrolyzing) ParC YP_005744677.1 1402983 D 546342 CDS YP_005744678.1 384861958 12329025 1405635..1407095 1 NC_017341.1 TIGRFAM: amino acid carrier protein PFAM: sodium:alanine symporter KEGG: sao:SAOUHSC_01354 sodium:alanine symporter family protein, putative; amino acid carrier protein 1407095 12329025 SAA6008_01321 Staphylococcus aureus subsp. aureus str. JKD6008 amino acid carrier protein YP_005744678.1 1405635 D 546342 CDS YP_005744679.1 384861959 12329026 1407571..1408743 1 NC_017341.1 transposase for IS256 1408743 12329026 SAA6008_01322 Staphylococcus aureus subsp. aureus str. JKD6008 transposase for IS256 YP_005744679.1 1407571 D 546342 CDS YP_005744680.1 384861960 12329027 1408927..1409778 1 NC_017341.1 PFAM: CAT RNA-binding domain protein; PRD domain protein KEGG: sao:SAOUHSC_01356 transcriptional antiterminator; transcriptional antiterminator 1409778 glcT 12329027 glcT Staphylococcus aureus subsp. aureus str. JKD6008 transcriptional antiterminator YP_005744680.1 1408927 D 546342 CDS YP_005744681.1 384861961 12329028 1409913..1411121 1 NC_017341.1 putative transporter 1411121 12329028 SAA6008_01324 Staphylococcus aureus subsp. aureus str. JKD6008 putative transporter YP_005744681.1 1409913 D 546342 CDS YP_005744682.1 384861962 12329029 1411602..1414124 1 NC_017341.1 oxacillin resistance-related FmtC protein 1414124 fmtC 12329029 fmtC Staphylococcus aureus subsp. aureus str. JKD6008 oxacillin resistance-related FmtC protein YP_005744682.1 1411602 D 546342 CDS YP_005744683.1 384861963 12329030 complement(1414327..1414791) 1 NC_017341.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; peptide methionine sulfoxide reductase 1414791 12329030 SAA6008_01326 Staphylococcus aureus subsp. aureus str. JKD6008 peptide methionine sulfoxide reductase YP_005744683.1 1414327 R 546342 CDS YP_005744684.1 384861964 12329031 1414973..1415956 1 NC_017341.1 cell envelope transcriptional attenuator 1415956 msrR 12329031 msrR Staphylococcus aureus subsp. aureus str. JKD6008 cell envelope transcriptional attenuator YP_005744684.1 1414973 D 546342 CDS YP_005744685.1 384861965 12329032 complement(1416044..1416229) 1 NC_017341.1 4-oxalocrotonate tautomerase 1416229 12329032 SAA6008_01328 Staphylococcus aureus subsp. aureus str. JKD6008 4-oxalocrotonate tautomerase YP_005744685.1 1416044 R 546342 CDS YP_005744686.1 384861966 12329033 1416377..1417639 1 NC_017341.1 ImpB/MucB/SamB family DNA-damage repair protein 1417639 12329033 SAA6008_01329 Staphylococcus aureus subsp. aureus str. JKD6008 ImpB/MucB/SamB family DNA-damage repair protein YP_005744686.1 1416377 D 546342 CDS YP_005744687.1 384861967 12329034 complement(1417776..1418867) 1 NC_017341.1 prephenate dehydrogenase 1418867 tyrA 12329034 tyrA Staphylococcus aureus subsp. aureus str. JKD6008 prephenate dehydrogenase YP_005744687.1 1417776 R 546342 CDS YP_005744688.1 384861968 12329035 1419032..1420063 1 NC_017341.1 M42 glutamyl aminopeptidase 1420063 12329035 SAA6008_01331 Staphylococcus aureus subsp. aureus str. JKD6008 M42 glutamyl aminopeptidase YP_005744688.1 1419032 D 546342 CDS YP_005744689.1 384861969 12329036 1420555..1421961 1 NC_017341.1 putative anthranilate synthase component I 1421961 trpE 12329036 trpE Staphylococcus aureus subsp. aureus str. JKD6008 putative anthranilate synthase component I YP_005744689.1 1420555 D 546342 CDS YP_005744690.1 384861970 12329037 1421958..1422524 1 NC_017341.1 anthranilate synthase, glutamine amidotransferase, component II 1422524 trpG 12329037 trpG Staphylococcus aureus subsp. aureus str. JKD6008 anthranilate synthase, glutamine amidotransferase, component II YP_005744690.1 1421958 D 546342 CDS YP_005744691.1 384861971 12329038 1422530..1423528 1 NC_017341.1 anthranilate phosphoribosyltransferase 1423528 trpD 12329038 trpD Staphylococcus aureus subsp. aureus str. JKD6008 anthranilate phosphoribosyltransferase YP_005744691.1 1422530 D 546342 CDS YP_005744692.1 384861972 12329039 1423530..1424312 1 NC_017341.1 indole-3-glycerol phosphate synthase 1424312 trpC 12329039 trpC Staphylococcus aureus subsp. aureus str. JKD6008 indole-3-glycerol phosphate synthase YP_005744692.1 1423530 D 546342 CDS YP_005744693.1 384861973 12329040 1424312..1424944 1 NC_017341.1 transcription termination/antitermination factor NusG 1424944 trpF 12329040 trpF Staphylococcus aureus subsp. aureus str. JKD6008 transcription termination/antitermination factor NusG YP_005744693.1 1424312 D 546342 CDS YP_005744694.1 384861974 12329041 1424937..1426151 1 NC_017341.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 1426151 trpB 12329041 trpB Staphylococcus aureus subsp. aureus str. JKD6008 tryptophan synthase subunit beta YP_005744694.1 1424937 D 546342 CDS YP_005744695.1 384861975 12329042 1426171..1426872 1 NC_017341.1 tryptophan synthase subunit alpha 1426872 trpA 12329042 trpA Staphylococcus aureus subsp. aureus str. JKD6008 tryptophan synthase subunit alpha YP_005744695.1 1426171 D 546342 CDS YP_005744696.1 384861976 12329043 1427188..1428456 1 NC_017341.1 considered essential for expression of methicillin resistance; glycine interpeptide bridge formation protein FemA 1428456 femA 12329043 femA Staphylococcus aureus subsp. aureus str. JKD6008 glycine interpeptide bridge formation protein FemA YP_005744696.1 1427188 D 546342 CDS YP_005744697.1 384861977 12329044 1428475..1429734 1 NC_017341.1 considered essential for expression of methicillin resistance; glycine interpeptide bridge formation protein FemB 1429734 femB 12329044 femB Staphylococcus aureus subsp. aureus str. JKD6008 glycine interpeptide bridge formation protein FemB YP_005744697.1 1428475 D 546342 CDS YP_005744698.1 384861978 12329045 1430417..1431184 1 NC_017341.1 haloacid dehalogenase-like hydrolase 1431184 12329045 SAA6008_01341 Staphylococcus aureus subsp. aureus str. JKD6008 haloacid dehalogenase-like hydrolase YP_005744698.1 1430417 D 546342 CDS YP_005744699.1 384861979 12329046 complement(1431232..1431705) 1 NC_017341.1 SWIM zinc finger domain-containing protein 1431705 12329046 SAA6008_01342 Staphylococcus aureus subsp. aureus str. JKD6008 SWIM zinc finger domain-containing protein YP_005744699.1 1431232 R 546342 CDS YP_005744700.1 384861980 12329047 complement(1431829..1432530) 1 NC_017341.1 ABC-type dipeptide/oligopeptide/nickel transporter, ATPase component 2 1432530 nikE 12329047 nikE Staphylococcus aureus subsp. aureus str. JKD6008 ABC-type dipeptide/oligopeptide/nickel transporter, ATPase component 2 YP_005744700.1 1431829 R 546342 CDS YP_005744701.1 384861981 12329048 complement(1432523..1433296) 1 NC_017341.1 ABC-type dipeptide/oligopeptide/nickel transporter, ATPase component 2 1433296 nikD 12329048 nikD Staphylococcus aureus subsp. aureus str. JKD6008 ABC-type dipeptide/oligopeptide/nickel transporter, ATPase component 2 YP_005744701.1 1432523 R 546342 CDS YP_005744702.1 384861982 12329049 complement(1433283..1434113) 1 NC_017341.1 oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein 1434113 opp-2C 12329049 opp-2C Staphylococcus aureus subsp. aureus str. JKD6008 oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein YP_005744702.1 1433283 R 546342 CDS YP_005744703.1 384861983 12329050 complement(1434106..1435053) 1 NC_017341.1 oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein 1435053 opp-2B 12329050 opp-2B Staphylococcus aureus subsp. aureus str. JKD6008 oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein YP_005744703.1 1434106 R 546342 CDS YP_005744704.1 384861984 12329051 complement(1435396..1435740) 1 NC_017341.1 conserved NfeD-like membrane protein 1435740 12329051 SAA6008_01347 Staphylococcus aureus subsp. aureus str. JKD6008 conserved NfeD-like membrane protein YP_005744704.1 1435396 R 546342 CDS YP_005744705.1 384861985 12329052 1435915..1437759 1 NC_017341.1 TIGRFAM: oligoendopeptidase F PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F KEGG: sao:SAOUHSC_01383 hypothetical protein; Oligoendopeptidase F 1437759 12329052 SAA6008_01348 Staphylococcus aureus subsp. aureus str. JKD6008 Oligoendopeptidase F YP_005744705.1 1435915 D 546342 CDS YP_005744706.1 384861986 12329053 complement(1437899..1438540) 1 NC_017341.1 phosphate uptake regulator 1438540 phoU 12329053 phoU Staphylococcus aureus subsp. aureus str. JKD6008 phosphate uptake regulator YP_005744706.1 1437899 R 546342 CDS YP_005744707.1 384861987 12329054 complement(1438547..1439398) 1 NC_017341.1 phosphate ABC superfamily ATP binding cassette transporter, ABC protein 1439398 pstB 12329054 pstB Staphylococcus aureus subsp. aureus str. JKD6008 phosphate ABC superfamily ATP binding cassette transporter, ABC protein YP_005744707.1 1438547 R 546342 CDS YP_005744708.1 384861988 12329055 complement(1439445..1440362) 1 NC_017341.1 phosphate ABC superfamily ATP binding cassette transporter, membrane protein 1440362 pstA 12329055 pstA Staphylococcus aureus subsp. aureus str. JKD6008 phosphate ABC superfamily ATP binding cassette transporter, membrane protein YP_005744708.1 1439445 R 546342 CDS YP_005744709.1 384861989 12329056 complement(1440364..1441290) 1 NC_017341.1 phosphate ABC superfamily ATP binding cassette transporter, membrane protein 1441290 pstC 12329056 pstC Staphylococcus aureus subsp. aureus str. JKD6008 phosphate ABC superfamily ATP binding cassette transporter, membrane protein YP_005744709.1 1440364 R 546342 CDS YP_005744710.1 384861990 12329057 complement(1441481..1442464) 1 NC_017341.1 phosphate ABC transporter periplasmic protein 1442464 pstS 12329057 pstS Staphylococcus aureus subsp. aureus str. JKD6008 phosphate ABC transporter periplasmic protein YP_005744710.1 1441481 R 546342 CDS YP_005744711.1 384861991 12329059 complement(1443435..1444337) 1 NC_017341.1 hypothetical protein 1444337 12329059 SAA6008_01355 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744711.1 1443435 R 546342 CDS YP_005744712.1 384861992 12329060 1444484..1446085 1 NC_017341.1 ABC transporter ATP-binding protein 1446085 12329060 SAA6008_01356 Staphylococcus aureus subsp. aureus str. JKD6008 ABC transporter ATP-binding protein YP_005744712.1 1444484 D 546342 CDS YP_005744713.1 384861993 12329061 1447020..1448150 1 NC_017341.1 aspartokinase, alpha and beta subunits 1448150 lysC 12329061 lysC Staphylococcus aureus subsp. aureus str. JKD6008 aspartokinase, alpha and beta subunits YP_005744713.1 1447020 D 546342 CDS YP_005744714.1 384861994 12329062 1448214..1449203 1 NC_017341.1 aspartate semialdehyde dehydrogenase 1449203 asd 12329062 asd Staphylococcus aureus subsp. aureus str. JKD6008 aspartate semialdehyde dehydrogenase YP_005744714.1 1448214 D 546342 CDS YP_005744715.1 384861995 12329063 1449205..1450092 1 NC_017341.1 dihydrodipicolinate synthase 1450092 dapA 12329063 dapA Staphylococcus aureus subsp. aureus str. JKD6008 dihydrodipicolinate synthase YP_005744715.1 1449205 D 546342 CDS YP_005744716.1 384861996 12329064 1450089..1450811 1 NC_017341.1 dihydrodipicolinate reductase 1450811 dapB 12329064 dapB Staphylococcus aureus subsp. aureus str. JKD6008 dihydrodipicolinate reductase YP_005744716.1 1450089 D 546342 CDS YP_005744717.1 384861997 12329065 1450838..1451557 1 NC_017341.1 tetrahydrodipicolinate N-acetyltransferase 1451557 dapD 12329065 dapD Staphylococcus aureus subsp. aureus str. JKD6008 tetrahydrodipicolinate N-acetyltransferase YP_005744717.1 1450838 D 546342 CDS YP_005744718.1 384861998 12329066 1451700..1452851 1 NC_017341.1 putative zinc peptidase 1452851 12329066 SAA6008_01362 Staphylococcus aureus subsp. aureus str. JKD6008 putative zinc peptidase YP_005744718.1 1451700 D 546342 CDS YP_005744719.1 384861999 12329067 1452856..1453941 1 NC_017341.1 alanine racemase family protein 1453941 alr2 12329067 alr2 Staphylococcus aureus subsp. aureus str. JKD6008 alanine racemase family protein YP_005744719.1 1452856 D 546342 CDS YP_005744720.1 384862000 12329068 1453931..1455196 1 NC_017341.1 diaminopimelate decarboxylase 1455196 lysA 12329068 lysA Staphylococcus aureus subsp. aureus str. JKD6008 diaminopimelate decarboxylase YP_005744720.1 1453931 D 546342 CDS YP_005744721.1 384862001 12329069 complement(1455436..1455837) 1 NC_017341.1 modulator of SarA, Msa 1455837 msa 12329069 msa Staphylococcus aureus subsp. aureus str. JKD6008 modulator of SarA, Msa YP_005744721.1 1455436 R 546342 CDS YP_005744722.1 384862002 12329070 complement(1456034..1456234) 1 NC_017341.1 putative cold-shock DNA-binding domain protein 1456234 cspA 12329070 cspA Staphylococcus aureus subsp. aureus str. JKD6008 putative cold-shock DNA-binding domain protein YP_005744722.1 1456034 R 546342 CDS YP_005744723.1 384862003 12329071 complement(1456405..1456713) 1 NC_017341.1 hypothetical protein 1456713 12329071 SAA6008_01367 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744723.1 1456405 R 546342 CDS YP_005744724.1 384862004 12329072 1456876..1457145 1 NC_017341.1 putative acylphosphatase 1457145 12329072 SAA6008_01368 Staphylococcus aureus subsp. aureus str. JKD6008 putative acylphosphatase YP_005744724.1 1456876 D 546342 CDS YP_005744725.1 384862005 12329073 1457170..1457793 1 NC_017341.1 5-bromo-4-chloroindolyl phosphate hydrolase 1457793 xpaC 12329073 xpaC Staphylococcus aureus subsp. aureus str. JKD6008 5-bromo-4-chloroindolyl phosphate hydrolase YP_005744725.1 1457170 D 546342 CDS YP_005744726.1 384862006 12329074 1457825..1458961 1 NC_017341.1 This family consists of several prokaryotic TelA like proteins. TelA and KlA are associated with tellurite resistance and plasmid fertility inhibition.; toxic anion resistance protein TelA 1458961 telA 12329074 telA Staphylococcus aureus subsp. aureus str. JKD6008 toxic anion resistance protein TelA YP_005744726.1 1457825 D 546342 CDS YP_005744727.1 384862007 12329076 complement(1459229..1459621) 1 NC_017341.1 truncated transposase for IS1272 1459621 12329076 SAA6008_01372 Staphylococcus aureus subsp. aureus str. JKD6008 truncated transposase for IS1272 YP_005744727.1 1459229 R 546342 CDS YP_005744728.1 384862008 12329077 complement(1459974..1461317) 1 NC_017341.1 PFAM: branched-chain amino acid transport system II carrier protein KEGG: sao:SAOUHSC_01411 branched-chain amino acid transport system II carrier protein; branched-chain amino acid permease, BrnQ_1 1461317 brnQ_1 12329077 brnQ_1 Staphylococcus aureus subsp. aureus str. JKD6008 branched-chain amino acid permease, BrnQ_1 YP_005744728.1 1459974 R 546342 CDS YP_005744729.1 384862009 12329078 complement(1461542..1463428) 1 NC_017341.1 nitric oxide reductase activation protein NorD 1463428 norD 12329078 norD Staphylococcus aureus subsp. aureus str. JKD6008 nitric oxide reductase activation protein NorD YP_005744729.1 1461542 R 546342 CDS YP_005744730.1 384862010 12329079 complement(1463442..1464233) 1 NC_017341.1 ATPase 1464233 12329079 SAA6008_01375 Staphylococcus aureus subsp. aureus str. JKD6008 ATPase YP_005744730.1 1463442 R 546342 CDS YP_005744731.1 384862011 12329080 complement(1464414..1464617) 1 NC_017341.1 hypothetical protein 1464617 12329080 SAA6008_01376 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744731.1 1464414 R 546342 CDS YP_005744732.1 384862012 12329081 complement(1464646..1465455) 1 NC_017341.1 Glyoxalase/bleomycin resistance protein/dioxygenase 1465455 12329081 SAA6008_01377 Staphylococcus aureus subsp. aureus str. JKD6008 Glyoxalase/bleomycin resistance protein/dioxygenase YP_005744732.1 1464646 R 546342 CDS YP_005744733.1 384862013 12329082 complement(1466035..1467303) 1 NC_017341.1 dihydrolipoamide succinyltransferase E2 component of 2-oxoglutarate dehydrogenase complex 1467303 odhB 12329082 odhB Staphylococcus aureus subsp. aureus str. JKD6008 dihydrolipoamide succinyltransferase E2 component of 2-oxoglutarate dehydrogenase complex YP_005744733.1 1466035 R 546342 CDS YP_005744734.1 384862014 12329083 complement(1467317..1470115) 1 NC_017341.1 oxoglutarate dehydrogenase (succinyl-transferring) E1 1470115 kgd 12329083 kgd Staphylococcus aureus subsp. aureus str. JKD6008 oxoglutarate dehydrogenase (succinyl-transferring) E1 YP_005744734.1 1467317 R 546342 CDS YP_005744735.1 384862015 12329084 complement(1470399..1471754) 1 NC_017341.1 signal transduction histidine kinase 1471754 arlS 12329084 arlS Staphylococcus aureus subsp. aureus str. JKD6008 signal transduction histidine kinase YP_005744735.1 1470399 R 546342 CDS YP_005744736.1 384862016 12329085 complement(1471751..1472410) 1 NC_017341.1 response regulator receiver 1472410 arlR 12329085 arlR Staphylococcus aureus subsp. aureus str. JKD6008 response regulator receiver YP_005744736.1 1471751 R 546342 CDS YP_005744737.1 384862017 12329086 1473004..1474176 1 NC_017341.1 transposase for IS256 1474176 12329086 SAA6008_01382 Staphylococcus aureus subsp. aureus str. JKD6008 transposase for IS256 YP_005744737.1 1473004 D 546342 CDS YP_005744738.1 384862018 12329089 complement(1475272..1475886) 1 NC_017341.1 phosphoesterase, PA-phosphatase-like protein 1475886 12329089 SAA6008_01385 Staphylococcus aureus subsp. aureus str. JKD6008 phosphoesterase, PA-phosphatase-like protein YP_005744738.1 1475272 R 546342 CDS YP_005744739.1 384862019 12329090 complement(1475903..1476973) 1 NC_017341.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; N-acetylglucosaminyl transferase, MurG 1476973 murG 12329090 murG Staphylococcus aureus subsp. aureus str. JKD6008 N-acetylglucosaminyl transferase, MurG YP_005744739.1 1475903 R 546342 CDS YP_005744740.1 384862020 12329091 complement(1476985..1477494) 1 NC_017341.1 GNAT family acetyltransferase 1477494 12329091 SAA6008_01387 Staphylococcus aureus subsp. aureus str. JKD6008 GNAT family acetyltransferase YP_005744740.1 1476985 R 546342 CDS YP_005744741.1 384862021 12329092 complement(1477894..1479384) 1 NC_017341.1 TIGRFAM: carboxyl-terminal protease PFAM: PDZ/DHR/GLGF domain protein; Peptidoglycan-binding domain 1 protein; peptidase S41 KEGG: sav:SAV1420 probable carboxy-terminal processing proteinase; serine protease 1479384 12329092 SAA6008_01388 Staphylococcus aureus subsp. aureus str. JKD6008 serine protease YP_005744741.1 1477894 R 546342 CDS YP_005744742.1 384862022 12329093 complement(1479576..1479797) 1 NC_017341.1 hypothetical protein 1479797 12329093 SAA6008_01389 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744742.1 1479576 R 546342 CDS YP_005744743.1 384862023 12329094 complement(1479797..1480297) 1 NC_017341.1 phosphotransferase system glucose-specific IIA component 1480297 crr 12329094 crr Staphylococcus aureus subsp. aureus str. JKD6008 phosphotransferase system glucose-specific IIA component YP_005744743.1 1479797 R 546342 CDS YP_005744744.1 384862024 12329095 complement(1480309..1480737) 1 NC_017341.1 peptide methionine sulfoxide reductase MsrB 1480737 msrB 12329095 msrB Staphylococcus aureus subsp. aureus str. JKD6008 peptide methionine sulfoxide reductase MsrB YP_005744744.1 1480309 R 546342 CDS YP_005744745.1 384862025 12329096 complement(1480730..1481263) 1 NC_017341.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; peptide methionine sulfoxide reductase II 1481263 12329096 SAA6008_01392 Staphylococcus aureus subsp. aureus str. JKD6008 peptide methionine sulfoxide reductase II YP_005744745.1 1480730 R 546342 CDS YP_005744746.1 384862026 12329097 complement(1481349..1482188) 1 NC_017341.1 identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762; fatty acid-binding protein, DegV family 1482188 12329097 SAA6008_01393 Staphylococcus aureus subsp. aureus str. JKD6008 fatty acid-binding protein, DegV family YP_005744746.1 1481349 R 546342 CDS YP_005744747.1 384862027 12329098 complement(1482203..1482682) 1 NC_017341.1 trimethoprim-sensitive dihydrofolate reductase 1482682 dfrA 12329098 dfrA Staphylococcus aureus subsp. aureus str. JKD6008 trimethoprim-sensitive dihydrofolate reductase YP_005744747.1 1482203 R 546342 CDS YP_005744748.1 384862028 12329099 complement(1482882..1483838) 1 NC_017341.1 thymidylate synthase 1483838 thyA 12329099 thyA Staphylococcus aureus subsp. aureus str. JKD6008 thymidylate synthase YP_005744748.1 1482882 R 546342 CDS YP_005744749.1 384862029 12329100 complement(1484262..1484699) 1 NC_017341.1 hypothetical protein 1484699 12329100 SAA6008_01396 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744749.1 1484262 R 546342 CDS YP_005744750.1 384862030 12329101 complement(1484715..1485839) 1 NC_017341.1 Fe-S cluster assembly protein 1485839 nifU 12329101 nifU Staphylococcus aureus subsp. aureus str. JKD6008 Fe-S cluster assembly protein YP_005744750.1 1484715 R 546342 CDS YP_005744751.1 384862031 12329102 complement(1485877..1486086) 1 NC_017341.1 Scaffold protein Nfu/NifU N terminal 1486086 12329102 SAA6008_01398 Staphylococcus aureus subsp. aureus str. JKD6008 Scaffold protein Nfu/NifU N terminal YP_005744751.1 1485877 R 546342 CDS YP_005744752.1 384862032 12329103 complement(1486140..1486361) 1 NC_017341.1 hypothetical protein 1486361 12329103 SAA6008_01399 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744752.1 1486140 R 546342 CDS YP_005744753.1 384862033 12329104 1486579..1487283 1 NC_017341.1 hypothetical protein 1487283 12329104 SAA6008_01400 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744753.1 1486579 D 546342 CDS YP_005744754.1 384862034 12329105 complement(1487348..1487479) 1 NC_017341.1 hypothetical protein 1487479 12329105 SAA6008_01401 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744754.1 1487348 R 546342 CDS YP_005744755.1 384862035 12329106 1487824..1488225 1 NC_017341.1 cell wall enzyme EbsB-like protein 1488225 12329106 SAA6008_01402 Staphylococcus aureus subsp. aureus str. JKD6008 cell wall enzyme EbsB-like protein YP_005744755.1 1487824 D 546342 CDS YP_005744756.1 384862036 12329107 complement(1488284..1519549) 1 NC_017341.1 extracellular matrix binding protein 1519549 12329107 SAA6008_01403 Staphylococcus aureus subsp. aureus str. JKD6008 extracellular matrix binding protein YP_005744756.1 1488284 R 546342 CDS YP_005744757.1 384862037 12329108 complement(1519933..1521333) 1 NC_017341.1 major facilitator superfamily transporter 1521333 12329108 SAA6008_01404 Staphylococcus aureus subsp. aureus str. JKD6008 major facilitator superfamily transporter YP_005744757.1 1519933 R 546342 CDS YP_005744758.1 384862038 12329109 complement(1521490..1522812) 1 NC_017341.1 PFAM: amino acid permease-associated region; fructoselysine transporter 1522812 frlA 12329109 frlA Staphylococcus aureus subsp. aureus str. JKD6008 fructoselysine transporter YP_005744758.1 1521490 R 546342 CDS YP_005744759.1 384862039 12329110 complement(1522843..1523883) 1 NC_017341.1 threonine dehydratase 1523883 ilvA 12329110 ilvA Staphylococcus aureus subsp. aureus str. JKD6008 threonine dehydratase YP_005744759.1 1522843 R 546342 CDS YP_005744760.1 384862040 12329111 complement(1523978..1525096) 1 NC_017341.1 alanine dehydrogenase 2 1525096 ald1 12329111 ald1 Staphylococcus aureus subsp. aureus str. JKD6008 alanine dehydrogenase 2 YP_005744760.1 1523978 R 546342 CDS YP_005744761.1 384862041 12329112 complement(1525571..1526449) 1 NC_017341.1 PFAM: 5'-3' exonuclease SMART: Helix-hairpin-helix domain protein class 2 KEGG: sab:SAB1305c probable 5'-3' exonuclease; exonuclease 1526449 12329112 SAA6008_01408 Staphylococcus aureus subsp. aureus str. JKD6008 exonuclease YP_005744761.1 1525571 R 546342 CDS YP_005744762.1 384862042 12329113 complement(1526469..1529909) 1 NC_017341.1 putative dynamin family protein 1529909 12329113 SAA6008_01409 Staphylococcus aureus subsp. aureus str. JKD6008 putative dynamin family protein YP_005744762.1 1526469 R 546342 CDS YP_005744763.1 384862043 12329114 1530213..1531553 1 NC_017341.1 putative iron-regulated membrane protein 1531553 piuB 12329114 piuB Staphylococcus aureus subsp. aureus str. JKD6008 putative iron-regulated membrane protein YP_005744763.1 1530213 D 546342 CDS YP_005744764.1 384862044 12329115 complement(1531759..1532091) 1 NC_017341.1 hypothetical protein 1532091 12329115 SAA6008_01411 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744764.1 1531759 R 546342 CDS YP_005744765.1 384862045 12329116 complement(1532175..1533320) 1 NC_017341.1 site-specific DNA-methyltransferase (adenine-specific) 1533320 12329116 SAA6008_01412 Staphylococcus aureus subsp. aureus str. JKD6008 site-specific DNA-methyltransferase (adenine-specific) YP_005744765.1 1532175 R 546342 CDS YP_005744766.1 384862046 12329117 complement(1533754..1533870) 1 NC_017341.1 hypothetical protein 1533870 12329117 SAA6008_01413 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744766.1 1533754 R 546342 CDS YP_005744767.1 384862047 12329118 complement(1533971..1534324) 1 NC_017341.1 cell division protein GpsB 1534324 gpsB 12329118 gpsB Staphylococcus aureus subsp. aureus str. JKD6008 cell division protein GpsB YP_005744767.1 1533971 R 546342 CDS YP_005744768.1 384862048 12329119 complement(1534329..1534892) 1 NC_017341.1 hypothetical protein 1534892 12329119 SAA6008_01415 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744768.1 1534329 R 546342 CDS YP_005744769.1 384862049 12329120 complement(1534885..1535235) 1 NC_017341.1 hypothetical protein 1535235 12329120 SAA6008_01416 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744769.1 1534885 R 546342 CDS YP_005744770.1 384862050 12329121 complement(1535290..1535469) 1 NC_017341.1 hypothetical protein 1535469 12329121 SAA6008_01417 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744770.1 1535290 R 546342 CDS YP_005744771.1 384862051 12329122 1535775..1536401 1 NC_017341.1 functions in homologous recombination, DNA repair, and chromosome segregation; binds preferentially to three- and four-stranded DNA intermediates; introduces specific nick sites in four-stranded DNA substrates; functions similarly to Escherichia coli RuvC; Holliday junction-specific endonuclease 1536401 recU 12329122 recU Staphylococcus aureus subsp. aureus str. JKD6008 Holliday junction-specific endonuclease YP_005744771.1 1535775 D 546342 CDS YP_005744772.1 384862052 12329123 1536398..1538581 1 NC_017341.1 glycosyl transferase family protein 1538581 pbp2 12329123 pbp2 Staphylococcus aureus subsp. aureus str. JKD6008 glycosyl transferase family protein YP_005744772.1 1536398 D 546342 CDS YP_005744773.1 384862053 12329124 complement(1539147..1539488) 1 NC_017341.1 hypothetical protein 1539488 12329124 SAA6008_01420 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744773.1 1539147 R 546342 CDS YP_005744774.1 384862054 12329125 complement(1539493..1540152) 1 NC_017341.1 DNA-(apurinic or apyrimidinic site) lyase 1540152 nth 12329125 nth Staphylococcus aureus subsp. aureus str. JKD6008 DNA-(apurinic or apyrimidinic site) lyase YP_005744774.1 1539493 R 546342 CDS YP_005744775.1 384862055 12329126 complement(1540142..1540828) 1 NC_017341.1 TIGRFAM: primosome, DnaD subunit PFAM: DnaD and phage-associated region KEGG: sam:MW1343 hypothetical protein, similar to chromosome replication initiation protein dnaD; DNA replication protein, DnaD 1540828 dnaD 12329126 dnaD Staphylococcus aureus subsp. aureus str. JKD6008 DNA replication protein, DnaD YP_005744775.1 1540142 R 546342 CDS YP_005744776.1 384862056 12329127 complement(1541156..1542448) 1 NC_017341.1 putative asparaginyl-tRNA synthetase 1542448 asnC 12329127 asnC Staphylococcus aureus subsp. aureus str. JKD6008 putative asparaginyl-tRNA synthetase YP_005744776.1 1541156 R 546342 CDS YP_005744777.1 384862057 12329128 complement(1542770..1545463) 1 NC_017341.1 DNA polymerase III, epsilon subunit/ATP-dependent helicase DinG 1545463 dinG 12329128 dinG Staphylococcus aureus subsp. aureus str. JKD6008 DNA polymerase III, epsilon subunit/ATP-dependent helicase DinG YP_005744777.1 1542770 R 546342 CDS YP_005744778.1 384862058 12329129 complement(1545487..1546458) 1 NC_017341.1 bifunctional biotin-(acetyl-CoA carboxylase) ligase / biotin operon repressor 1546458 birA 12329129 birA Staphylococcus aureus subsp. aureus str. JKD6008 bifunctional biotin-(acetyl-CoA carboxylase) ligase / biotin operon repressor YP_005744778.1 1545487 R 546342 CDS YP_005744779.1 384862059 12329130 complement(1546445..1547647) 1 NC_017341.1 polynucleotide adenylyltransferase 1547647 papS 12329130 papS Staphylococcus aureus subsp. aureus str. JKD6008 polynucleotide adenylyltransferase YP_005744779.1 1546445 R 546342 CDS YP_005744780.1 384862060 12329131 complement(1547652..1548764) 1 NC_017341.1 lipopolysaccharide biosynthesis-related pr-like protein 1548764 12329131 SAA6008_01427 Staphylococcus aureus subsp. aureus str. JKD6008 lipopolysaccharide biosynthesis-related pr-like protein YP_005744780.1 1547652 R 546342 CDS YP_005744781.1 384862061 12329132 complement(1549035..1549352) 1 NC_017341.1 nucleoside triphosphate pyrophosphohydrolase 1549352 mazG 12329132 mazG Staphylococcus aureus subsp. aureus str. JKD6008 nucleoside triphosphate pyrophosphohydrolase YP_005744781.1 1549035 R 546342 CDS YP_005744782.1 384862062 12329133 complement(1549689..1550396) 1 NC_017341.1 putative neutral zinc metallopeptidase 1550396 12329133 SAA6008_01429 Staphylococcus aureus subsp. aureus str. JKD6008 putative neutral zinc metallopeptidase YP_005744782.1 1549689 R 546342 CDS YP_005744783.1 384862063 12329134 complement(1550441..1551028) 1 NC_017341.1 hypothetical protein 1551028 12329134 SAA6008_01430 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744783.1 1550441 R 546342 CDS YP_005744784.1 384862064 12329135 complement(1551018..1551593) 1 NC_017341.1 hypothetical protein 1551593 12329135 SAA6008_01431 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744784.1 1551018 R 546342 CDS YP_005744785.1 384862065 12329136 complement(1551607..1552851) 1 NC_017341.1 putative PEP-CTERM system TPR-repeat lipoprotein 1552851 12329136 SAA6008_01432 Staphylococcus aureus subsp. aureus str. JKD6008 putative PEP-CTERM system TPR-repeat lipoprotein YP_005744785.1 1551607 R 546342 CDS YP_005744786.1 384862066 12329137 complement(1552858..1554156) 1 NC_017341.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 1554156 aroA 12329137 aroA Staphylococcus aureus subsp. aureus str. JKD6008 3-phosphoshikimate 1-carboxyvinyltransferase YP_005744786.1 1552858 R 546342 CDS YP_005744787.1 384862067 12329138 complement(1554166..1555230) 1 NC_017341.1 putative 3-dehydroquinate synthase 1555230 aroB 12329138 aroB Staphylococcus aureus subsp. aureus str. JKD6008 putative 3-dehydroquinate synthase YP_005744787.1 1554166 R 546342 CDS YP_005744788.1 384862068 12329139 complement(1555256..1556422) 1 NC_017341.1 chorismate synthase 1556422 aroC 12329139 aroC Staphylococcus aureus subsp. aureus str. JKD6008 chorismate synthase YP_005744788.1 1555256 R 546342 CDS YP_005744789.1 384862069 12329140 complement(1556808..1557008) 1 NC_017341.1 hypothetical protein 1557008 12329140 SAA6008_01436 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744789.1 1556808 R 546342 CDS YP_005744790.1 384862070 12329141 complement(1557217..1557666) 1 NC_017341.1 nucleoside diphosphate kinase superfamily 1557666 ndk 12329141 ndk Staphylococcus aureus subsp. aureus str. JKD6008 nucleoside diphosphate kinase superfamily YP_005744790.1 1557217 R 546342 CDS YP_005744791.1 384862071 12329142 complement(1557758..1558702) 1 NC_017341.1 iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane protein 1558702 gerCC 12329142 gerCC Staphylococcus aureus subsp. aureus str. JKD6008 iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane protein YP_005744791.1 1557758 R 546342 CDS YP_005744792.1 384862072 12329143 complement(1558719..1559444) 1 NC_017341.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; putative 2-heptaprenyl-1,4-naphthoquinone methyltransferase 1559444 12329143 SAA6008_01439 Staphylococcus aureus subsp. aureus str. JKD6008 putative 2-heptaprenyl-1,4-naphthoquinone methyltransferase YP_005744792.1 1558719 R 546342 CDS YP_005744793.1 384862073 12329144 complement(1559447..1560019) 1 NC_017341.1 pfam07307: component A of hexaprenyl diphosphate synthase; heptaprenyl diphosphate synthase subunit 1 1560019 12329144 SAA6008_01440 Staphylococcus aureus subsp. aureus str. JKD6008 heptaprenyl diphosphate synthase subunit 1 YP_005744793.1 1559447 R 546342 CDS YP_005744794.1 384862074 12329145 complement(1560450..1560722) 1 NC_017341.1 histone family protein DNA-binding protein HU 1560722 12329145 SAA6008_01441 Staphylococcus aureus subsp. aureus str. JKD6008 histone family protein DNA-binding protein HU YP_005744794.1 1560450 R 546342 CDS YP_005744795.1 384862075 12329146 complement(1560893..1561891) 1 NC_017341.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 1561891 gpsA 12329146 gpsA Staphylococcus aureus subsp. aureus str. JKD6008 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_005744795.1 1560893 R 546342 CDS YP_005744796.1 384862076 12329147 complement(1561908..1563218) 1 NC_017341.1 GTP-binding protein EngA 1563218 engA 12329147 engA Staphylococcus aureus subsp. aureus str. JKD6008 GTP-binding protein EngA YP_005744796.1 1561908 R 546342 CDS YP_005744797.1 384862077 12329148 complement(1563440..1564615) 1 NC_017341.1 putative 30S ribosomal protein S1 1564615 rpsA 12329148 rpsA Staphylococcus aureus subsp. aureus str. JKD6008 putative 30S ribosomal protein S1 YP_005744797.1 1563440 R 546342 CDS YP_005744798.1 384862078 12329149 complement(1565180..1565296) 1 NC_017341.1 hypothetical protein 1565296 12329149 SAA6008_01445 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744798.1 1565180 R 546342 CDS YP_005744799.1 384862079 12329150 complement(1565327..1565986) 1 NC_017341.1 cytidylate kinase 1565986 cmk 12329150 cmk Staphylococcus aureus subsp. aureus str. JKD6008 cytidylate kinase YP_005744799.1 1565327 R 546342 CDS YP_005744800.1 384862080 12329151 1566105..1567031 1 NC_017341.1 Alpha/beta hydrolase fold-3 domain-containing protein 1567031 ansA 12329151 ansA Staphylococcus aureus subsp. aureus str. JKD6008 Alpha/beta hydrolase fold-3 domain-containing protein YP_005744800.1 1566105 D 546342 CDS YP_005744801.1 384862081 12329152 complement(1567146..1568132) 1 NC_017341.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1568132 12329152 SAA6008_01448 Staphylococcus aureus subsp. aureus str. JKD6008 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_005744801.1 1567146 R 546342 CDS YP_005744802.1 384862082 12329153 complement(1568534..1570000) 1 NC_017341.1 cell surface elastin binding protein 1570000 ebpS 12329153 ebpS Staphylococcus aureus subsp. aureus str. JKD6008 cell surface elastin binding protein YP_005744802.1 1568534 R 546342 CDS YP_005744803.1 384862083 12329154 complement(1570147..1571526) 1 NC_017341.1 ATP-dependent DNA helicase 1571526 recQ 12329154 recQ Staphylococcus aureus subsp. aureus str. JKD6008 ATP-dependent DNA helicase YP_005744803.1 1570147 R 546342 CDS YP_005744804.1 384862084 12329155 complement(1571516..1572469) 1 NC_017341.1 hypothetical protein 1572469 12329155 SAA6008_01451 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744804.1 1571516 R 546342 CDS YP_005744805.1 384862085 12329156 1572577..1572825 1 NC_017341.1 Ferredoxin-like protein 1572825 fer 12329156 fer Staphylococcus aureus subsp. aureus str. JKD6008 Ferredoxin-like protein YP_005744805.1 1572577 D 546342 CDS YP_005744806.1 384862086 12329157 complement(1572931..1573476) 1 NC_017341.1 KEGG: sao:SAOUHSC_01505 hypothetical protein; riboflavin transporter 1573476 12329157 SAA6008_01453 Staphylococcus aureus subsp. aureus str. JKD6008 riboflavin transporter YP_005744806.1 1572931 R 546342 CDS YP_005744807.1 384862087 12329158 complement(1573755..1573874) 1 NC_017341.1 hypothetical protein 1573874 12329158 SAA6008_01454 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744807.1 1573755 R 546342 CDS YP_005744808.1 384862088 12329159 complement(1574073..1574987) 1 NC_017341.1 hypothetical protein 1574987 12329159 SAA6008_01455 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744808.1 1574073 R 546342 CDS YP_005744809.1 384862089 12329160 complement(1575002..1575208) 1 NC_017341.1 hypothetical protein 1575208 12329160 SAA6008_01456 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744809.1 1575002 R 546342 CDS YP_005744810.1 384862090 12329161 complement(1575201..1576139) 1 NC_017341.1 hypothetical protein 1576139 12329161 SAA6008_01457 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744810.1 1575201 R 546342 CDS YP_005744811.1 384862091 12329162 complement(1576197..1577114) 1 NC_017341.1 putative lipoprotein 1577114 12329162 SAA6008_01458 Staphylococcus aureus subsp. aureus str. JKD6008 putative lipoprotein YP_005744811.1 1576197 R 546342 CDS YP_005744812.1 384862092 12329163 complement(1577205..1579367) 1 NC_017341.1 hypothetical protein 1579367 12329163 SAA6008_01459 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744812.1 1577205 R 546342 CDS YP_005744813.1 384862093 12329164 complement(1579360..1580289) 1 NC_017341.1 hypothetical protein 1580289 12329164 SAA6008_01460 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744813.1 1579360 R 546342 CDS YP_005744814.1 384862094 12329165 complement(1580534..1582228) 1 NC_017341.1 integral membrane sensor signal transduction histidine kinase 1582228 srrB 12329165 srrB Staphylococcus aureus subsp. aureus str. JKD6008 integral membrane sensor signal transduction histidine kinase YP_005744814.1 1580534 R 546342 CDS YP_005744815.1 384862095 12329166 complement(1582266..1582991) 1 NC_017341.1 winged helix family two component transcriptional regulator 1582991 srrA 12329166 srrA Staphylococcus aureus subsp. aureus str. JKD6008 winged helix family two component transcriptional regulator YP_005744815.1 1582266 R 546342 CDS YP_005744816.1 384862096 12329167 complement(1583124..1583861) 1 NC_017341.1 ribosomal large subunit pseudouridine synthase B, RluB 1583861 rluB 12329167 rluB Staphylococcus aureus subsp. aureus str. JKD6008 ribosomal large subunit pseudouridine synthase B, RluB YP_005744816.1 1583124 R 546342 CDS YP_005744817.1 384862097 12329168 complement(1583854..1584396) 1 NC_017341.1 Putative transcriptional regulators (Ypuh-like) 1584396 scpB 12329168 scpB Staphylococcus aureus subsp. aureus str. JKD6008 Putative transcriptional regulators (Ypuh-like) YP_005744817.1 1583854 R 546342 CDS YP_005744818.1 384862098 12329169 complement(1584389..1585144) 1 NC_017341.1 chromosome segregation and condensation protein ScpA 1585144 scpA 12329169 scpA Staphylococcus aureus subsp. aureus str. JKD6008 chromosome segregation and condensation protein ScpA YP_005744818.1 1584389 R 546342 CDS YP_005744819.1 384862099 12329170 1585212..1585718 1 NC_017341.1 PFAM: protein of unknown function DUF309 KEGG: sao:SAOUHSC_01590 hypothetical protein; hypothetical protein 1585718 12329170 SAA6008_01466 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744819.1 1585212 D 546342 CDS YP_005744820.1 384862100 12329171 complement(1585796..1586683) 1 NC_017341.1 site-specific recombinase XerD 1586683 xerD 12329171 xerD Staphylococcus aureus subsp. aureus str. JKD6008 site-specific recombinase XerD YP_005744820.1 1585796 R 546342 CDS YP_005744821.1 384862101 12329172 complement(1586732..1587181) 1 NC_017341.1 identified by similarity to EGAD:14407; match to protein family HMM PF01475; Ferric uptake regulation protein Fur 1587181 fur 12329172 fur Staphylococcus aureus subsp. aureus str. JKD6008 Ferric uptake regulation protein Fur YP_005744821.1 1586732 R 546342 CDS YP_005744822.1 384862102 12329173 complement(1587286..1587828) 1 NC_017341.1 PFAM: NUDIX hydrolase KEGG: sav:SAV1499 ADP-ribose pyrophosphatase; ADP-ribose pyrophosphatase, NudF 1587828 nudF 12329173 nudF Staphylococcus aureus subsp. aureus str. JKD6008 ADP-ribose pyrophosphatase, NudF YP_005744822.1 1587286 R 546342 CDS YP_005744823.1 384862103 12329174 1587910..1588818 1 NC_017341.1 aldo/keto oxidoreductase 1588818 12329174 SAA6008_01470 Staphylococcus aureus subsp. aureus str. JKD6008 aldo/keto oxidoreductase YP_005744823.1 1587910 D 546342 CDS YP_005744824.1 384862104 12329175 complement(1589298..1590053) 1 NC_017341.1 short chain dehydrogenase 1590053 12329175 SAA6008_01471 Staphylococcus aureus subsp. aureus str. JKD6008 short chain dehydrogenase YP_005744824.1 1589298 R 546342 CDS YP_005744825.1 384862105 12329176 1590195..1591010 1 NC_017341.1 pyrroline-5-carboxylate reductase 1591010 proC 12329176 proC Staphylococcus aureus subsp. aureus str. JKD6008 pyrroline-5-carboxylate reductase YP_005744825.1 1590195 D 546342 CDS YP_005744826.1 384862106 12329177 complement(1591115..1592035) 1 NC_017341.1 identified by match to protein family HMM TIGR02651; metallo-beta-lactamase, AtsA/ElaC family 1592035 12329177 SAA6008_01473 Staphylococcus aureus subsp. aureus str. JKD6008 metallo-beta-lactamase, AtsA/ElaC family YP_005744826.1 1591115 R 546342 CDS YP_005744827.1 384862107 12329178 complement(1592092..1592226) 1 NC_017341.1 hypothetical protein 1592226 12329178 SAA6008_01474 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744827.1 1592092 R 546342 CDS YP_005744828.1 384862108 12329179 1592348..1593832 1 NC_017341.1 putative glucose-6-phosphate 1-dehydrogenase 1593832 zwf 12329179 zwf Staphylococcus aureus subsp. aureus str. JKD6008 putative glucose-6-phosphate 1-dehydrogenase YP_005744828.1 1592348 D 546342 CDS YP_005744829.1 384862109 12329180 1594062..1594928 1 NC_017341.1 PFAM: helix-turn-helix- domain containing protein AraC type; transcription activator effector binding KEGG: sao:SAOUHSC_01600 hypothetical protein; AraC family transcriptional regulator 1594928 12329180 SAA6008_01476 Staphylococcus aureus subsp. aureus str. JKD6008 AraC family transcriptional regulator YP_005744829.1 1594062 D 546342 CDS YP_005744830.1 384862110 12329181 complement(1595011..1596660) 1 NC_017341.1 alpha amylase 1596660 malA 12329181 malA Staphylococcus aureus subsp. aureus str. JKD6008 alpha amylase YP_005744830.1 1595011 R 546342 CDS YP_005744831.1 384862111 12329182 complement(1596676..1597695) 1 NC_017341.1 maltose operon transcriptional repressor 1597695 malR 12329182 malR Staphylococcus aureus subsp. aureus str. JKD6008 maltose operon transcriptional repressor YP_005744831.1 1596676 R 546342 CDS YP_005744832.1 384862112 12329183 complement(1597889..1598260) 1 NC_017341.1 glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 1598260 12329183 SAA6008_01479 Staphylococcus aureus subsp. aureus str. JKD6008 glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein YP_005744832.1 1597889 R 546342 CDS YP_005744833.1 384862113 12329184 complement(1598479..1599885) 1 NC_017341.1 6-phosphogluconate dehydrogenase 1599885 gnd 12329184 gnd Staphylococcus aureus subsp. aureus str. JKD6008 6-phosphogluconate dehydrogenase YP_005744833.1 1598479 R 546342 CDS YP_005744834.1 384862114 12329185 complement(1599953..1601086) 1 NC_017341.1 M20/M25/M40 family peptidase 1601086 12329185 SAA6008_01481 Staphylococcus aureus subsp. aureus str. JKD6008 M20/M25/M40 family peptidase YP_005744834.1 1599953 R 546342 CDS YP_005744835.1 384862115 12329186 1601349..1601528 1 NC_017341.1 hypothetical protein 1601528 12329186 SAA6008_01482 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744835.1 1601349 D 546342 CDS YP_005744836.1 384862116 12329187 complement(1601655..1602635) 1 NC_017341.1 hypothetical protein 1602635 12329187 SAA6008_01483 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744836.1 1601655 R 546342 CDS YP_005744837.1 384862117 12329188 complement(1602649..1603086) 1 NC_017341.1 hypothetical protein 1603086 12329188 SAA6008_01484 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744837.1 1602649 R 546342 CDS YP_005744838.1 384862118 12329189 complement(1603437..1604711) 1 NC_017341.1 lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex 1604711 bfmB 12329189 bfmB Staphylococcus aureus subsp. aureus str. JKD6008 lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex YP_005744838.1 1603437 R 546342 CDS YP_005744839.1 384862119 12329190 complement(1604724..1605707) 1 NC_017341.1 2-oxoisovalerate dehydrogenase, E1 component, beta subunit 1605707 bfmBAB 12329190 bfmBAB Staphylococcus aureus subsp. aureus str. JKD6008 2-oxoisovalerate dehydrogenase, E1 component, beta subunit YP_005744839.1 1604724 R 546342 CDS YP_005744840.1 384862120 12329191 complement(1605707..1606699) 1 NC_017341.1 2-oxoisovalerate dehydrogenase subunit alpha 1606699 acoA 12329191 acoA Staphylococcus aureus subsp. aureus str. JKD6008 2-oxoisovalerate dehydrogenase subunit alpha YP_005744840.1 1605707 R 546342 CDS YP_005744841.1 384862121 12329192 complement(1606715..1608136) 1 NC_017341.1 dihydrolipoamide dehydrogenase 1608136 lpdA 12329192 lpdA Staphylococcus aureus subsp. aureus str. JKD6008 dihydrolipoamide dehydrogenase YP_005744841.1 1606715 R 546342 CDS YP_005744842.1 384862122 12329193 complement(1608287..1609966) 1 NC_017341.1 putative DNA repair protein 1609966 recN 12329193 recN Staphylococcus aureus subsp. aureus str. JKD6008 putative DNA repair protein YP_005744842.1 1608287 R 546342 CDS YP_005744843.1 384862123 12329194 complement(1609982..1610434) 1 NC_017341.1 arginine repressor 1610434 ahrC 12329194 ahrC Staphylococcus aureus subsp. aureus str. JKD6008 arginine repressor YP_005744843.1 1609982 R 546342 CDS YP_005744844.1 384862124 12329195 complement(1610866..1611732) 1 NC_017341.1 putative geranyltranstransferase 1611732 ispA 12329195 ispA Staphylococcus aureus subsp. aureus str. JKD6008 putative geranyltranstransferase YP_005744844.1 1610866 R 546342 CDS YP_005744845.1 384862125 12329196 complement(1611725..1611955) 1 NC_017341.1 putative exodeoxyribonuclease VII small subunit 1611955 xseB 12329196 xseB Staphylococcus aureus subsp. aureus str. JKD6008 putative exodeoxyribonuclease VII small subunit YP_005744845.1 1611725 R 546342 CDS YP_005744846.1 384862126 12329197 complement(1611948..1613285) 1 NC_017341.1 putative exodeoxyribonuclease VII large subunit 1613285 xseA 12329197 xseA Staphylococcus aureus subsp. aureus str. JKD6008 putative exodeoxyribonuclease VII large subunit YP_005744846.1 1611948 R 546342 CDS YP_005744847.1 384862127 12329198 complement(1613302..1613691) 1 NC_017341.1 putative N utilization substance protein B 1613691 nusB 12329198 nusB Staphylococcus aureus subsp. aureus str. JKD6008 putative N utilization substance protein B YP_005744847.1 1613302 R 546342 CDS YP_005744848.1 384862128 12329199 complement(1613751..1614113) 1 NC_017341.1 alkaline shock protein 1614113 12329199 SAA6008_01495 Staphylococcus aureus subsp. aureus str. JKD6008 alkaline shock protein YP_005744848.1 1613751 R 546342 CDS YP_005744849.1 384862129 12329200 complement(1614128..1615483) 1 NC_017341.1 acetyl-CoA carboxylase accC (biotin carboxylase subunit) 1615483 accC 12329200 accC Staphylococcus aureus subsp. aureus str. JKD6008 acetyl-CoA carboxylase accC (biotin carboxylase subunit) YP_005744849.1 1614128 R 546342 CDS YP_005744850.1 384862130 12329201 complement(1615483..1615947) 1 NC_017341.1 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 1615947 accB 12329201 accB Staphylococcus aureus subsp. aureus str. JKD6008 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit YP_005744850.1 1615483 R 546342 CDS YP_005744851.1 384862131 12329202 complement(1616421..1616978) 1 NC_017341.1 translation elongation factor EF-P 1616978 efp 12329202 efp Staphylococcus aureus subsp. aureus str. JKD6008 translation elongation factor EF-P YP_005744851.1 1616421 R 546342 CDS YP_005744852.1 384862132 12329203 complement(1617004..1618065) 1 NC_017341.1 PFAM: creatinase; peptidase M24 KEGG: sav:SAV1529 Xaa-Pro dipeptidase; M24B family Xaa-Pro dipeptidase 1618065 12329203 SAA6008_01499 Staphylococcus aureus subsp. aureus str. JKD6008 M24B family Xaa-Pro dipeptidase YP_005744852.1 1617004 R 546342 CDS YP_005744853.1 384862133 12329204 1618170..1618751 1 NC_017341.1 hypothetical protein 1618751 12329204 SAA6008_01500 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744853.1 1618170 D 546342 CDS YP_005744854.1 384862134 12329205 1618765..1618983 1 NC_017341.1 hypothetical protein 1618983 12329205 SAA6008_01501 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744854.1 1618765 D 546342 CDS YP_005744855.1 384862135 12329206 complement(1619047..1619877) 1 NC_017341.1 lipoate-protein ligase A family protein 1619877 12329206 SAA6008_01502 Staphylococcus aureus subsp. aureus str. JKD6008 lipoate-protein ligase A family protein YP_005744855.1 1619047 R 546342 CDS YP_005744856.1 384862136 12329207 1620035..1620421 1 NC_017341.1 putative rhodanese domain sulfurtransferase 1620421 12329207 SAA6008_01503 Staphylococcus aureus subsp. aureus str. JKD6008 putative rhodanese domain sulfurtransferase YP_005744856.1 1620035 D 546342 CDS YP_005744857.1 384862137 12329208 complement(1620786..1622258) 1 NC_017341.1 glycine dehydrogenase subunit 2 1622258 gcvPB 12329208 gcvPB Staphylococcus aureus subsp. aureus str. JKD6008 glycine dehydrogenase subunit 2 YP_005744857.1 1620786 R 546342 CDS YP_005744858.1 384862138 12329209 complement(1622251..1623597) 1 NC_017341.1 glycine dehydrogenase, subunit 1 (glycine cleavage system P protein) 1623597 gcvPA 12329209 gcvPA Staphylococcus aureus subsp. aureus str. JKD6008 glycine dehydrogenase, subunit 1 (glycine cleavage system P protein) YP_005744858.1 1622251 R 546342 CDS YP_005744859.1 384862139 12329210 complement(1623617..1624708) 1 NC_017341.1 aminomethyltransferase (glycine cleavage system T protein) 1624708 gcvT 12329210 gcvT Staphylococcus aureus subsp. aureus str. JKD6008 aminomethyltransferase (glycine cleavage system T protein) YP_005744859.1 1623617 R 546342 CDS YP_005744860.1 384862140 12329211 complement(1624867..1625391) 1 NC_017341.1 PFAM: shikimate kinase KEGG: sab:SAB1410c hypothetical protein; shikimate kinase, AroK 1625391 aroK 12329211 aroK Staphylococcus aureus subsp. aureus str. JKD6008 shikimate kinase, AroK YP_005744860.1 1624867 R 546342 CDS YP_005744861.1 384862141 12329212 complement(1625381..1625524) 1 NC_017341.1 hypothetical protein 1625524 12329212 SAA6008_01508 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744861.1 1625381 R 546342 CDS YP_005744862.1 384862142 12329213 complement(1625624..1626106) 1 NC_017341.1 Competence protein ComGF-like protein 1626106 comGF 12329213 comGF Staphylococcus aureus subsp. aureus str. JKD6008 Competence protein ComGF-like protein YP_005744862.1 1625624 R 546342 CDS YP_005744863.1 384862143 12329214 complement(1626039..1626296) 1 NC_017341.1 hypothetical protein 1626296 12329214 SAA6008_01510 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744863.1 1626039 R 546342 CDS YP_005744864.1 384862144 12329215 complement(1626325..1626771) 1 NC_017341.1 Type II secretory pathway, pseudopilin PulG 1626771 pulG 12329215 pulG Staphylococcus aureus subsp. aureus str. JKD6008 Type II secretory pathway, pseudopilin PulG YP_005744864.1 1626325 R 546342 CDS YP_005744865.1 384862145 12329216 complement(1626749..1627015) 1 NC_017341.1 Competence protein ComGC-like protein 1627015 comGC 12329216 comGC Staphylococcus aureus subsp. aureus str. JKD6008 Competence protein ComGC-like protein YP_005744865.1 1626749 R 546342 CDS YP_005744866.1 384862146 12329217 complement(1627074..1628144) 1 NC_017341.1 DNA transport mechinery protein 1628144 12329217 SAA6008_01513 Staphylococcus aureus subsp. aureus str. JKD6008 DNA transport mechinery protein YP_005744866.1 1627074 R 546342 CDS YP_005744867.1 384862147 12329218 complement(1628116..1629090) 1 NC_017341.1 PFAM: type II secretion system protein E KEGG: sas:SAS1482 competence protein ComGA; late competence protein, ComGA 1629090 12329218 SAA6008_01514 Staphylococcus aureus subsp. aureus str. JKD6008 late competence protein, ComGA YP_005744867.1 1628116 R 546342 CDS YP_005744868.1 384862148 12329219 complement(1629142..1629765) 1 NC_017341.1 PFAM: beta-lactamase domain protein KEGG: sao:SAOUHSC_01644 hypothetical protein; metallo-beta-lactamase superfamily protein 1629765 12329219 SAA6008_01515 Staphylococcus aureus subsp. aureus str. JKD6008 metallo-beta-lactamase superfamily protein YP_005744868.1 1629142 R 546342 CDS YP_005744869.1 384862149 12329220 complement(1629762..1630091) 1 NC_017341.1 hypothetical protein 1630091 12329220 SAA6008_01516 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744869.1 1629762 R 546342 CDS YP_005744870.1 384862150 12329221 complement(1630091..1631077) 1 NC_017341.1 putative glucokinase, ROK family 1631077 glcK 12329221 glcK Staphylococcus aureus subsp. aureus str. JKD6008 putative glucokinase, ROK family YP_005744870.1 1630091 R 546342 CDS YP_005744871.1 384862151 12329222 complement(1631258..1632721) 1 NC_017341.1 peptidase, rhomboid family protein 1632721 gluP 12329222 gluP Staphylococcus aureus subsp. aureus str. JKD6008 peptidase, rhomboid family protein YP_005744871.1 1631258 R 546342 CDS YP_005744872.1 384862152 12329223 complement(1632733..1633272) 1 NC_017341.1 5-formyltetrahydrofolate cyclo-ligase 1633272 12329223 SAA6008_01519 Staphylococcus aureus subsp. aureus str. JKD6008 5-formyltetrahydrofolate cyclo-ligase YP_005744872.1 1632733 R 546342 CDS YP_005744873.1 384862153 12329224 complement(1633481..1633630) 1 NC_017341.1 50S ribosomal protein L33 type 1 1633630 rpmG 12329224 rpmG Staphylococcus aureus subsp. aureus str. JKD6008 50S ribosomal protein L33 type 1 YP_005744873.1 1633481 R 546342 CDS YP_005744874.1 384862154 12329225 complement(1633743..1635818) 1 NC_017341.1 penicillin-binding protein 3 1635818 pbp3 12329225 pbp3 Staphylococcus aureus subsp. aureus str. JKD6008 penicillin-binding protein 3 YP_005744874.1 1633743 R 546342 CDS YP_005744875.1 384862155 12329226 complement(1635939..1636538) 1 NC_017341.1 superoxide dismutase Mn/Fe family protein 1636538 sodA 12329226 sodA Staphylococcus aureus subsp. aureus str. JKD6008 superoxide dismutase Mn/Fe family protein YP_005744875.1 1635939 R 546342 CDS YP_005744876.1 384862156 12329227 complement(1636814..1637224) 1 NC_017341.1 identified by match to protein family HMM PF01475, ferric-uptake regulator; zinc-specific metalloregulatory protein 1637224 12329227 SAA6008_01523 Staphylococcus aureus subsp. aureus str. JKD6008 zinc-specific metalloregulatory protein YP_005744876.1 1636814 R 546342 CDS YP_005744877.1 384862157 12329228 complement(1637211..1638074) 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, membrane protein 1638074 mreB 12329228 mreB Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, membrane protein YP_005744877.1 1637211 R 546342 CDS YP_005744878.1 384862158 12329229 complement(1638116..1638883) 1 NC_017341.1 zinc ABC transporter 1638883 znuC 12329229 znuC Staphylococcus aureus subsp. aureus str. JKD6008 zinc ABC transporter YP_005744878.1 1638116 R 546342 CDS YP_005744879.1 384862159 12329230 complement(1639027..1639917) 1 NC_017341.1 deoxyribonuclease IV (phage-T(4)-induced) 1639917 nfo 12329230 nfo Staphylococcus aureus subsp. aureus str. JKD6008 deoxyribonuclease IV (phage-T(4)-induced) YP_005744879.1 1639027 R 546342 CDS YP_005744880.1 384862160 12329231 complement(1639927..1641273) 1 NC_017341.1 ATP-dependent RNA helicase DEAD/DEAH box family protein 1641273 12329231 SAA6008_01527 Staphylococcus aureus subsp. aureus str. JKD6008 ATP-dependent RNA helicase DEAD/DEAH box family protein YP_005744880.1 1639927 R 546342 CDS YP_005744881.1 384862161 12329232 complement(1641387..1642487) 1 NC_017341.1 NIF3 (NGG1p interacting factor 3) 1642487 12329232 SAA6008_01528 Staphylococcus aureus subsp. aureus str. JKD6008 NIF3 (NGG1p interacting factor 3) YP_005744881.1 1641387 R 546342 CDS YP_005744882.1 384862162 12329233 complement(1642490..1643167) 1 NC_017341.1 hypothetical protein 1643167 12329233 SAA6008_01529 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744882.1 1642490 R 546342 CDS YP_005744883.1 384862163 12329234 complement(1643298..1644404) 1 NC_017341.1 RNA polymerase sigma-70 factor RpoD 1644404 rpoD 12329234 rpoD Staphylococcus aureus subsp. aureus str. JKD6008 RNA polymerase sigma-70 factor RpoD YP_005744883.1 1643298 R 546342 CDS YP_005744884.1 384862164 12329235 complement(1644628..1646427) 1 NC_017341.1 DNA primase 1646427 dnaG 12329235 dnaG Staphylococcus aureus subsp. aureus str. JKD6008 DNA primase YP_005744884.1 1644628 R 546342 CDS YP_005744885.1 384862165 12329236 complement(1646488..1647306) 1 NC_017341.1 hypothetical protein 1647306 12329236 SAA6008_01532 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744885.1 1646488 R 546342 CDS YP_005744886.1 384862166 12329237 complement(1647317..1647856) 1 NC_017341.1 hypothetical protein 1647856 12329237 SAA6008_01533 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744886.1 1647317 R 546342 CDS YP_005744887.1 384862167 12329238 1648275..1649666 1 NC_017341.1 putative glycyl-tRNA synthetase 1649666 glyS 12329238 glyS Staphylococcus aureus subsp. aureus str. JKD6008 putative glycyl-tRNA synthetase YP_005744887.1 1648275 D 546342 CDS YP_005744888.1 384862168 12329239 complement(1649816..1650562) 1 NC_017341.1 putative recombinational DNA repair protein (RecF pathway) 1650562 recO 12329239 recO Staphylococcus aureus subsp. aureus str. JKD6008 putative recombinational DNA repair protein (RecF pathway) YP_005744888.1 1649816 R 546342 CDS YP_005744889.1 384862169 12329241 complement(1651488..1651892) 1 NC_017341.1 cytidine deaminase 1651892 cdd 12329241 cdd Staphylococcus aureus subsp. aureus str. JKD6008 cytidine deaminase YP_005744889.1 1651488 R 546342 CDS YP_005744890.1 384862170 12329242 complement(1651903..1652247) 1 NC_017341.1 PFAM: diacylglycerol kinase KEGG: sao:SAOUHSC_01671 diacylglycerol kinase, putative; diacylglycerol kinase 1652247 dgkA 12329242 dgkA Staphylococcus aureus subsp. aureus str. JKD6008 diacylglycerol kinase YP_005744890.1 1651903 R 546342 CDS YP_005744891.1 384862171 12329243 complement(1652250..1652717) 1 NC_017341.1 putative metalloprotease 1652717 12329243 SAA6008_01540 Staphylococcus aureus subsp. aureus str. JKD6008 putative metalloprotease YP_005744891.1 1652250 R 546342 CDS YP_005744892.1 384862172 12329244 complement(1652718..1653665) 1 NC_017341.1 phosphate starvation-inducible ATPase 1653665 phoH 12329244 phoH Staphylococcus aureus subsp. aureus str. JKD6008 phosphate starvation-inducible ATPase YP_005744892.1 1652718 R 546342 CDS YP_005744893.1 384862173 12329245 complement(1653969..1654667) 1 NC_017341.1 hypothetical protein 1654667 12329245 SAA6008_01542 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744893.1 1653969 R 546342 CDS YP_005744894.1 384862174 12329246 complement(1654684..1655673) 1 NC_017341.1 SigmaW regulon antibacterial protein 1655673 12329246 SAA6008_01543 Staphylococcus aureus subsp. aureus str. JKD6008 SigmaW regulon antibacterial protein YP_005744894.1 1654684 R 546342 CDS YP_005744895.1 384862175 12329247 complement(1655691..1656398) 1 NC_017341.1 PFAM: protein of unknown function DUF107 KEGG: sab:SAB1446c probable membrane protein; membrane-bound serine protease 1656398 12329247 SAA6008_01544 Staphylococcus aureus subsp. aureus str. JKD6008 membrane-bound serine protease YP_005744895.1 1655691 R 546342 CDS YP_005744896.1 384862176 12329248 complement(1656618..1656794) 1 NC_017341.1 30S ribosomal protein S21 1656794 rpsU 12329248 rpsU Staphylococcus aureus subsp. aureus str. JKD6008 30S ribosomal protein S21 YP_005744896.1 1656618 R 546342 CDS YP_005744897.1 384862177 12329249 complement(1657087..1658433) 1 NC_017341.1 radical SAM domain-containing protein 1658433 12329249 SAA6008_01546 Staphylococcus aureus subsp. aureus str. JKD6008 radical SAM domain-containing protein YP_005744897.1 1657087 R 546342 CDS YP_005744898.1 384862178 12329250 complement(1658440..1659192) 1 NC_017341.1 16S ribosomal RNA methyltransferase RsmE 1659192 rsmE 12329250 rsmE Staphylococcus aureus subsp. aureus str. JKD6008 16S ribosomal RNA methyltransferase RsmE YP_005744898.1 1658440 R 546342 CDS YP_005744899.1 384862179 12329251 complement(1659194..1660132) 1 NC_017341.1 50S ribosomal protein L11 methyltransferase 1660132 prmA 12329251 prmA Staphylococcus aureus subsp. aureus str. JKD6008 50S ribosomal protein L11 methyltransferase YP_005744899.1 1659194 R 546342 CDS YP_005744900.1 384862180 12329252 complement(1660136..1661275) 1 NC_017341.1 chaperone protein DnaJ 1661275 dnaJ 12329252 dnaJ Staphylococcus aureus subsp. aureus str. JKD6008 chaperone protein DnaJ YP_005744900.1 1660136 R 546342 CDS YP_005744901.1 384862181 12329253 complement(1661411..1663243) 1 NC_017341.1 molecular chaperone DnaK 1663243 dnaK 12329253 dnaK Staphylococcus aureus subsp. aureus str. JKD6008 molecular chaperone DnaK YP_005744901.1 1661411 R 546342 CDS YP_005744902.1 384862182 12329254 complement(1663312..1663938) 1 NC_017341.1 heat shock molecular chaperone protein 1663938 grpE 12329254 grpE Staphylococcus aureus subsp. aureus str. JKD6008 heat shock molecular chaperone protein YP_005744902.1 1663312 R 546342 CDS YP_005744903.1 384862183 12329255 complement(1663970..1664947) 1 NC_017341.1 heat-inducible transcription repressor HrcA 1664947 hrcA 12329255 hrcA Staphylococcus aureus subsp. aureus str. JKD6008 heat-inducible transcription repressor HrcA YP_005744903.1 1663970 R 546342 CDS YP_005744904.1 384862184 12329256 complement(1665048..1666172) 1 NC_017341.1 coproporphyrinogen III oxidase 1666172 hemN 12329256 hemN Staphylococcus aureus subsp. aureus str. JKD6008 coproporphyrinogen III oxidase YP_005744904.1 1665048 R 546342 CDS YP_005744905.1 384862185 12329257 complement(1666735..1668558) 1 NC_017341.1 GTP-binding protein LepA 1668558 lepA 12329257 lepA Staphylococcus aureus subsp. aureus str. JKD6008 GTP-binding protein LepA YP_005744905.1 1666735 R 546342 CDS YP_005744906.1 384862186 12329258 1668904..1669155 1 NC_017341.1 putative 30S ribosomal protein S20 1669155 rpsT 12329258 rpsT Staphylococcus aureus subsp. aureus str. JKD6008 putative 30S ribosomal protein S20 YP_005744906.1 1668904 D 546342 CDS YP_005744907.1 384862187 12329259 complement(1669200..1670174) 1 NC_017341.1 DNA polymerase III subunit delta 1670174 holA 12329259 holA Staphylococcus aureus subsp. aureus str. JKD6008 DNA polymerase III subunit delta YP_005744907.1 1669200 R 546342 CDS YP_005744908.1 384862188 12329260 complement(1670231..1672432) 1 NC_017341.1 competence protein ComEC 1672432 comEC 12329260 comEC Staphylococcus aureus subsp. aureus str. JKD6008 competence protein ComEC YP_005744908.1 1670231 R 546342 CDS YP_005744909.1 384862189 12329261 complement(1672437..1672898) 1 NC_017341.1 late competence operon required for DNA binding and uptake comEB 1672898 comEB 12329261 comEB Staphylococcus aureus subsp. aureus str. JKD6008 late competence operon required for DNA binding and uptake comEB YP_005744909.1 1672437 R 546342 CDS YP_005744910.1 384862190 12329262 complement(1672990..1673667) 1 NC_017341.1 competence protein ComEA 1673667 comEA 12329262 comEA Staphylococcus aureus subsp. aureus str. JKD6008 competence protein ComEA YP_005744910.1 1672990 R 546342 CDS YP_005744911.1 384862191 12329263 complement(1673716..1674432) 1 NC_017341.1 putative methyltransferase 1674432 12329263 SAA6008_01561 Staphylococcus aureus subsp. aureus str. JKD6008 putative methyltransferase YP_005744911.1 1673716 R 546342 CDS YP_005744912.1 384862192 12329264 complement(1674435..1674788) 1 NC_017341.1 hypothetical protein 1674788 12329264 SAA6008_01562 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744912.1 1674435 R 546342 CDS YP_005744913.1 384862193 12329265 complement(1674789..1675373) 1 NC_017341.1 metal dependent phosphohydrolase 1675373 12329265 SAA6008_01563 Staphylococcus aureus subsp. aureus str. JKD6008 metal dependent phosphohydrolase YP_005744913.1 1674789 R 546342 CDS YP_005744914.1 384862194 12329266 complement(1675363..1675932) 1 NC_017341.1 nicotinate (nicotinamide) nucleotide adenylyltransferase 1675932 nadD 12329266 nadD Staphylococcus aureus subsp. aureus str. JKD6008 nicotinate (nicotinamide) nucleotide adenylyltransferase YP_005744914.1 1675363 R 546342 CDS YP_005744915.1 384862195 12329267 complement(1675935..1676225) 1 NC_017341.1 involved in late steps of large ribosomal assembly; RNA-binding protein YbhY 1676225 yhbY 12329267 yhbY Staphylococcus aureus subsp. aureus str. JKD6008 RNA-binding protein YbhY YP_005744915.1 1675935 R 546342 CDS YP_005744916.1 384862196 12329268 complement(1676229..1676984) 1 NC_017341.1 shikimate 5-dehydrogenase 1676984 aroE 12329268 aroE Staphylococcus aureus subsp. aureus str. JKD6008 shikimate 5-dehydrogenase YP_005744916.1 1676229 R 546342 CDS YP_005744917.1 384862197 12329269 complement(1677049..1678149) 1 NC_017341.1 PFAM: GTP-binding protein HSR1-related KEGG: sav:SAV1597 similar to GTPase family protein; GTPase family protein 1678149 12329269 SAA6008_01567 Staphylococcus aureus subsp. aureus str. JKD6008 GTPase family protein YP_005744917.1 1677049 R 546342 CDS YP_005744918.1 384862198 12329270 complement(1678150..1678677) 1 NC_017341.1 haloacid dehalogenase-like hydrolase 1678677 12329270 SAA6008_01568 Staphylococcus aureus subsp. aureus str. JKD6008 haloacid dehalogenase-like hydrolase YP_005744918.1 1678150 R 546342 CDS YP_005744919.1 384862199 12329271 complement(1678697..1679383) 1 NC_017341.1 bifunctional methylthioadenosine nucleosidase/adenosylhomocysteine nucleosidase 1679383 pfs 12329271 pfs Staphylococcus aureus subsp. aureus str. JKD6008 bifunctional methylthioadenosine nucleosidase/adenosylhomocysteine nucleosidase YP_005744919.1 1678697 R 546342 CDS YP_005744920.1 384862200 12329272 complement(1679429..1679551) 1 NC_017341.1 hypothetical protein 1679551 12329272 SAA6008_01570 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744920.1 1679429 R 546342 CDS YP_005744921.1 384862201 12329273 1679697..1679966 1 NC_017341.1 hypothetical protein 1679966 12329273 SAA6008_01571 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744921.1 1679697 D 546342 CDS YP_005744922.1 384862202 12329274 complement(1680168..1680920) 1 NC_017341.1 identified by match to protein family HMM PF01123; match to protein family HMM PF02876; enterotoxin family protein 1680920 12329274 SAA6008_01572 Staphylococcus aureus subsp. aureus str. JKD6008 enterotoxin family protein YP_005744922.1 1680168 R 546342 CDS YP_005744923.1 384862203 12329275 complement(1681334..1682554) 1 NC_017341.1 hypothetical protein 1682554 12329275 SAA6008_01573 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744923.1 1681334 R 546342 CDS YP_005744924.1 384862204 12329276 complement(1682843..1684072) 1 NC_017341.1 NRAMP family Mn2+/Fe2+ transporter 1684072 mntH 12329276 mntH Staphylococcus aureus subsp. aureus str. JKD6008 NRAMP family Mn2+/Fe2+ transporter YP_005744924.1 1682843 R 546342 CDS YP_005744925.1 384862205 12329277 complement(1684085..1684837) 1 NC_017341.1 LamB/YcsF family protein 1684837 lamB 12329277 lamB Staphylococcus aureus subsp. aureus str. JKD6008 LamB/YcsF family protein YP_005744925.1 1684085 R 546342 CDS YP_005744926.1 384862206 12329278 complement(1684837..1686198) 1 NC_017341.1 PFAM: PF02786.10 Carbamoyl-phosphate synthase L chain, ATP binding domain; acetyl-CoA carboxylase biotin carboxylase subunit, AccC_1 1686198 accC_1 12329278 accC_1 Staphylococcus aureus subsp. aureus str. JKD6008 acetyl-CoA carboxylase biotin carboxylase subunit, AccC_1 YP_005744926.1 1684837 R 546342 CDS YP_005744927.1 384862207 12329279 complement(1686212..1686661) 1 NC_017341.1 PFAM: biotin/lipoyl attachment domain-containing protein KEGG: sas:SAS1543 putative biotin carboxyl carrier protein of acetyl-CoA carboxylase; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit, Acc_B1 1686661 accB_1 12329279 accB_1 Staphylococcus aureus subsp. aureus str. JKD6008 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit, Acc_B1 YP_005744927.1 1686212 R 546342 CDS YP_005744928.1 384862208 12329280 complement(1686663..1687673) 1 NC_017341.1 allophanate hydrolase subunit 2 1687673 ahs2 12329280 ahs2 Staphylococcus aureus subsp. aureus str. JKD6008 allophanate hydrolase subunit 2 YP_005744928.1 1686663 R 546342 CDS YP_005744929.1 384862209 12329281 complement(1687663..1688397) 1 NC_017341.1 allophanate hydrolase subunit 1 1688397 12329281 SAA6008_01579 Staphylococcus aureus subsp. aureus str. JKD6008 allophanate hydrolase subunit 1 YP_005744929.1 1687663 R 546342 CDS YP_005744930.1 384862210 12329282 complement(1688723..1689199) 1 NC_017341.1 transcription elongation factor GreA 1689199 greA 12329282 greA Staphylococcus aureus subsp. aureus str. JKD6008 transcription elongation factor GreA YP_005744930.1 1688723 R 546342 CDS YP_005744931.1 384862211 12329283 complement(1689227..1689850) 1 NC_017341.1 uridine kinase 1689850 udk 12329283 udk Staphylococcus aureus subsp. aureus str. JKD6008 uridine kinase YP_005744931.1 1689227 R 546342 CDS YP_005744932.1 384862212 12329284 complement(1689850..1691118) 1 NC_017341.1 peptidase U32 family protein 1691118 12329284 SAA6008_01582 Staphylococcus aureus subsp. aureus str. JKD6008 peptidase U32 family protein YP_005744932.1 1689850 R 546342 CDS YP_005744933.1 384862213 12329285 complement(1691130..1692053) 1 NC_017341.1 peptidase U32 family protein 1692053 12329285 SAA6008_01583 Staphylococcus aureus subsp. aureus str. JKD6008 peptidase U32 family protein YP_005744933.1 1691130 R 546342 CDS YP_005744934.1 384862214 12329286 complement(1692056..1692694) 1 NC_017341.1 PFAM: O-methyltransferase family 3 KEGG: sav:SAV1614 similar to caffeoyl-CoA O-methyltransferase; caffeoyl-CoA O-methyltransferase 1692694 12329286 SAA6008_01584 Staphylococcus aureus subsp. aureus str. JKD6008 caffeoyl-CoA O-methyltransferase YP_005744934.1 1692056 R 546342 CDS YP_005744935.1 384862215 12329287 complement(1692979..1693287) 1 NC_017341.1 hypothetical protein 1693287 12329287 SAA6008_01585 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744935.1 1692979 R 546342 CDS YP_005744936.1 384862216 12329288 complement(1693302..1693730) 1 NC_017341.1 Holliday junction resolvase 1693730 12329288 SAA6008_01586 Staphylococcus aureus subsp. aureus str. JKD6008 Holliday junction resolvase YP_005744936.1 1693302 R 546342 CDS YP_005744937.1 384862217 12329289 complement(1693734..1693994) 1 NC_017341.1 hypothetical protein 1693994 12329289 SAA6008_01587 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744937.1 1693734 R 546342 CDS YP_005744938.1 384862218 12329290 complement(1694057..1696690) 1 NC_017341.1 putative alanyl-tRNA synthetase 1696690 alaS 12329290 alaS Staphylococcus aureus subsp. aureus str. JKD6008 putative alanyl-tRNA synthetase YP_005744938.1 1694057 R 546342 CDS YP_005744939.1 384862219 12329291 complement(1697030..1699474) 1 NC_017341.1 exodeoxyribonuclease V subunit alpha 1699474 recD 12329291 recD Staphylococcus aureus subsp. aureus str. JKD6008 exodeoxyribonuclease V subunit alpha YP_005744939.1 1697030 R 546342 CDS YP_005744940.1 384862220 12329292 complement(1699506..1700174) 1 NC_017341.1 hypothetical protein 1700174 12329292 SAA6008_01590 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744940.1 1699506 R 546342 CDS YP_005744941.1 384862221 12329293 complement(1700636..1701754) 1 NC_017341.1 tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase 1701754 trmU 12329293 trmU Staphylococcus aureus subsp. aureus str. JKD6008 tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase YP_005744941.1 1700636 R 546342 CDS YP_005744942.1 384862222 12329294 complement(1701755..1702897) 1 NC_017341.1 identified by match to protein family HMM PF00266, PFAM: aminotransferase class V; Pyridoxal-dependent decarboxylase KEGG: sav:SAV1622 iron-sulfur cofactor synthesis protein homolog; cysteine desulfurase, NifS 1702897 nifS 12329294 nifS Staphylococcus aureus subsp. aureus str. JKD6008 cysteine desulfurase, NifS YP_005744942.1 1701755 R 546342 CDS YP_005744943.1 384862223 12329295 1703209..1704222 1 NC_017341.1 luciferase family oxidoreductase 1704222 12329295 SAA6008_01593 Staphylococcus aureus subsp. aureus str. JKD6008 luciferase family oxidoreductase YP_005744943.1 1703209 D 546342 CDS YP_005744944.1 384862224 12329296 complement(1704459..1704605) 1 NC_017341.1 hypothetical protein 1704605 12329296 SAA6008_01594 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744944.1 1704459 R 546342 CDS YP_005744945.1 384862225 12329297 complement(1704645..1704827) 1 NC_017341.1 sigma-B mediated bacterial general stress response protein 1704827 csbD 12329297 csbD Staphylococcus aureus subsp. aureus str. JKD6008 sigma-B mediated bacterial general stress response protein YP_005744945.1 1704645 R 546342 CDS YP_005744946.1 384862226 12329298 complement(1704927..1705349) 1 NC_017341.1 Rfr2 family transcriptional regulator 1705349 12329298 SAA6008_01596 Staphylococcus aureus subsp. aureus str. JKD6008 Rfr2 family transcriptional regulator YP_005744946.1 1704927 R 546342 CDS YP_005744947.1 384862227 12329299 1705434..1706708 1 NC_017341.1 DNA-directed DNA polymerase III subunit gamma and tau 1706708 rarA 12329299 rarA Staphylococcus aureus subsp. aureus str. JKD6008 DNA-directed DNA polymerase III subunit gamma and tau YP_005744947.1 1705434 D 546342 CDS YP_005744948.1 384862228 12329300 complement(1706869..1707642) 1 NC_017341.1 ThiF family protein 1707642 12329300 SAA6008_01598 Staphylococcus aureus subsp. aureus str. JKD6008 ThiF family protein YP_005744948.1 1706869 R 546342 CDS YP_005744949.1 384862229 12329301 complement(1708103..1709869) 1 NC_017341.1 aspartyl-tRNA synthetase 1709869 aspS 12329301 aspS Staphylococcus aureus subsp. aureus str. JKD6008 aspartyl-tRNA synthetase YP_005744949.1 1708103 R 546342 CDS YP_005744950.1 384862230 12329302 complement(1709885..1711147) 1 NC_017341.1 histidyl-tRNA synthetase 1711147 hisS 12329302 hisS Staphylococcus aureus subsp. aureus str. JKD6008 histidyl-tRNA synthetase YP_005744950.1 1709885 R 546342 CDS YP_005744951.1 384862231 12329303 complement(1711608..1712483) 1 NC_017341.1 N-acetylmuramoyl-L-alanine amidase family protein 1712483 lytH 12329303 lytH Staphylococcus aureus subsp. aureus str. JKD6008 N-acetylmuramoyl-L-alanine amidase family protein YP_005744951.1 1711608 R 546342 CDS YP_005744952.1 384862232 12329304 complement(1712480..1712932) 1 NC_017341.1 D-tyrosyl-tRNA (Tyr) deacylase 1712932 dtd 12329304 dtd Staphylococcus aureus subsp. aureus str. JKD6008 D-tyrosyl-tRNA (Tyr) deacylase YP_005744952.1 1712480 R 546342 CDS YP_005744953.1 384862233 12329305 complement(1712944..1715133) 1 NC_017341.1 TIGRFAM: RelA/SpoT family protein PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase, HD sub domain; RelA/SpoT domain protein SMART: metal-dependent phosphohydrolase, HD region; GTP pyrophosphokinase, (p)ppGpp synthetase I, RelA 1715133 relA 12329305 relA Staphylococcus aureus subsp. aureus str. JKD6008 GTP pyrophosphokinase, (p)ppGpp synthetase I, RelA YP_005744953.1 1712944 R 546342 CDS YP_005744954.1 384862234 12329306 complement(1715561..1716079) 1 NC_017341.1 adenine phosphoribosyl transferase 1716079 apt 12329306 apt Staphylococcus aureus subsp. aureus str. JKD6008 adenine phosphoribosyl transferase YP_005744954.1 1715561 R 546342 CDS YP_005744955.1 384862235 12329307 complement(1716101..1718374) 1 NC_017341.1 putative single-stranded-DNA-specific exonuclease 1718374 recJ 12329307 recJ Staphylococcus aureus subsp. aureus str. JKD6008 putative single-stranded-DNA-specific exonuclease YP_005744955.1 1716101 R 546342 CDS YP_005744956.1 384862236 12329308 complement(1718577..1720796) 1 NC_017341.1 RND superfamily resistance-nodulation-cell division protein:proton (H+) antiporter 1720796 secF 12329308 secF Staphylococcus aureus subsp. aureus str. JKD6008 RND superfamily resistance-nodulation-cell division protein:proton (H+) antiporter YP_005744956.1 1718577 R 546342 CDS YP_005744957.1 384862237 12329309 complement(1721131..1721334) 1 NC_017341.1 Sec family Type I general secretory pathway preprotein translocase subunit YajC 1721334 yajC 12329309 yajC Staphylococcus aureus subsp. aureus str. JKD6008 Sec family Type I general secretory pathway preprotein translocase subunit YajC YP_005744957.1 1721131 R 546342 CDS YP_005744958.1 384862238 12329310 complement(1721410..1722549) 1 NC_017341.1 queuine tRNA-ribosyltransferase 1722549 tgt 12329310 tgt Staphylococcus aureus subsp. aureus str. JKD6008 queuine tRNA-ribosyltransferase YP_005744958.1 1721410 R 546342 CDS YP_005744959.1 384862239 12329311 complement(1722572..1723597) 1 NC_017341.1 S-adenosylmethionine--tRNA ribosyltransferase-isomerase 1723597 queA 12329311 queA Staphylococcus aureus subsp. aureus str. JKD6008 S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_005744959.1 1722572 R 546342 CDS YP_005744960.1 384862240 12329312 complement(1723599..1724603) 1 NC_017341.1 crossover junction endodeoxyribonuclease 1724603 ruvB 12329312 ruvB Staphylococcus aureus subsp. aureus str. JKD6008 crossover junction endodeoxyribonuclease YP_005744960.1 1723599 R 546342 CDS YP_005744961.1 384862241 12329313 complement(1724635..1725237) 1 NC_017341.1 crossover junction endodeoxyribonuclease 1725237 ruvA 12329313 ruvA Staphylococcus aureus subsp. aureus str. JKD6008 crossover junction endodeoxyribonuclease YP_005744961.1 1724635 R 546342 CDS YP_005744962.1 384862242 12329314 complement(1725251..1725709) 1 NC_017341.1 hypothetical protein 1725709 12329314 SAA6008_01612 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744962.1 1725251 R 546342 CDS YP_005744963.1 384862243 12329315 complement(1725719..1727011) 1 NC_017341.1 Spo0B-associated GTP-binding protein 1727011 obgE 12329315 obgE Staphylococcus aureus subsp. aureus str. JKD6008 Spo0B-associated GTP-binding protein YP_005744963.1 1725719 R 546342 CDS YP_005744964.1 384862244 12329316 complement(1727366..1727650) 1 NC_017341.1 50S ribosomal protein L27 1727650 rpmA 12329316 rpmA Staphylococcus aureus subsp. aureus str. JKD6008 50S ribosomal protein L27 YP_005744964.1 1727366 R 546342 CDS YP_005744965.1 384862245 12329317 complement(1727662..1727982) 1 NC_017341.1 PFAM: protein of unknown function DUF464 KEGG: sao:SAOUHSC_01756 hypothetical protein; hypothetical protein 1727982 12329317 SAA6008_01615 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744965.1 1727662 R 546342 CDS YP_005744966.1 384862246 12329318 complement(1727988..1728296) 1 NC_017341.1 50S ribosomal protein L21 1728296 rplU 12329318 rplU Staphylococcus aureus subsp. aureus str. JKD6008 50S ribosomal protein L21 YP_005744966.1 1727988 R 546342 CDS YP_005744967.1 384862247 12329319 complement(1728463..1728993) 1 NC_017341.1 cell shape determining protein MreD 1728993 mreD 12329319 mreD Staphylococcus aureus subsp. aureus str. JKD6008 cell shape determining protein MreD YP_005744967.1 1728463 R 546342 CDS YP_005744968.1 384862248 12329320 complement(1728993..1729835) 1 NC_017341.1 cell shape determining protein MreC 1729835 mreC 12329320 mreC Staphylococcus aureus subsp. aureus str. JKD6008 cell shape determining protein MreC YP_005744968.1 1728993 R 546342 CDS YP_005744969.1 384862249 12329321 complement(1730228..1730701) 1 NC_017341.1 hypothetical protein 1730701 12329321 SAA6008_01619 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744969.1 1730228 R 546342 CDS YP_005744970.1 384862250 12329322 complement(1731175..1731423) 1 NC_017341.1 hypothetical protein 1731423 12329322 SAA6008_01620 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744970.1 1731175 R 546342 CDS YP_005744971.1 384862251 12329323 complement(1731527..1731643) 1 NC_017341.1 DNA repair protein RadC 1731643 12329323 SAA6008_01621 Staphylococcus aureus subsp. aureus str. JKD6008 DNA repair protein RadC YP_005744971.1 1731527 R 546342 CDS YP_005744972.1 384862252 12329324 complement(1731908..1732570) 1 NC_017341.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; methylase 1732570 12329324 SAA6008_01622 Staphylococcus aureus subsp. aureus str. JKD6008 methylase YP_005744972.1 1731908 R 546342 CDS YP_005744973.1 384862253 12329325 1733079..1733810 1 NC_017341.1 PFAM: ribosomal RNA adenine methylase transferase; putative methyltransferase KEGG: ser:SERP2510 rRNA adenine N-6-methyltransferase; rRNA adenine N-6-methyltransferase, ErmA 1733810 ermA_1 12329325 ermA_1 Staphylococcus aureus subsp. aureus str. JKD6008 rRNA adenine N-6-methyltransferase, ErmA YP_005744973.1 1733079 D 546342 CDS YP_005744974.1 384862254 12329326 complement(1733936..1734718) 1 NC_017341.1 aminoglycoside resistance protein 1734718 12329326 SAA6008_01624 Staphylococcus aureus subsp. aureus str. JKD6008 aminoglycoside resistance protein YP_005744974.1 1733936 R 546342 CDS YP_005744975.1 384862255 12329327 complement(1734869..1735246) 1 NC_017341.1 KEGG: ser:SERP2508 transposase C; transposition regulatory protein TnpC 1735246 tnpC_2 12329327 tnpC_2 Staphylococcus aureus subsp. aureus str. JKD6008 transposition regulatory protein TnpC YP_005744975.1 1734869 R 546342 CDS YP_005744976.1 384862256 12329328 complement(1735253..1737145) 1 NC_017341.1 transposition regulatory protein TnpB_2 1737145 tnpB_2 12329328 tnpB_2 Staphylococcus aureus subsp. aureus str. JKD6008 transposition regulatory protein TnpB_2 YP_005744976.1 1735253 R 546342 CDS YP_005744977.1 384862257 12329329 complement(1737142..1738227) 1 NC_017341.1 phage integrase 1738227 12329329 SAA6008_01627 Staphylococcus aureus subsp. aureus str. JKD6008 phage integrase YP_005744977.1 1737142 R 546342 CDS YP_005744978.1 384862258 12329330 complement(1738346..1738900) 1 NC_017341.1 putative DNA repair protein, RadC 1738900 12329330 SAA6008_01628 Staphylococcus aureus subsp. aureus str. JKD6008 putative DNA repair protein, RadC YP_005744978.1 1738346 R 546342 CDS YP_005744979.1 384862259 12329331 complement(1738897..1739604) 1 NC_017341.1 PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein KEGG: sao:SAOUHSC_01764 hypothetical protein; Type 4 prepilin-like proteins leader peptide-processing enzyme 1739604 12329331 SAA6008_01629 Staphylococcus aureus subsp. aureus str. JKD6008 Type 4 prepilin-like proteins leader peptide-processing enzyme YP_005744979.1 1738897 R 546342 CDS YP_005744980.1 384862260 12329332 complement(1739874..1741145) 1 NC_017341.1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase 1741145 folC 12329332 folC Staphylococcus aureus subsp. aureus str. JKD6008 bifunctional folylpolyglutamate synthase/dihydrofolate synthase YP_005744980.1 1739874 R 546342 CDS YP_005744981.1 384862261 12329333 complement(1741158..1743788) 1 NC_017341.1 valyl-tRNA synthetase 1743788 valS 12329333 valS Staphylococcus aureus subsp. aureus str. JKD6008 valyl-tRNA synthetase YP_005744981.1 1741158 R 546342 CDS YP_005744982.1 384862262 12329334 1744191..1744751 1 NC_017341.1 DNA-3-methyladenine glycosylase I 1744751 tag 12329334 tag Staphylococcus aureus subsp. aureus str. JKD6008 DNA-3-methyladenine glycosylase I YP_005744982.1 1744191 D 546342 CDS YP_005744983.1 384862263 12329335 complement(1744974..1746047) 1 NC_017341.1 putative ammonia monooxygenase 1746047 amoA 12329335 amoA Staphylococcus aureus subsp. aureus str. JKD6008 putative ammonia monooxygenase YP_005744983.1 1744974 R 546342 CDS YP_005744984.1 384862264 12329336 1745926..1746075 1 NC_017341.1 hypothetical protein 1746075 12329336 SAA6008_01633 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744984.1 1745926 D 546342 CDS YP_005744985.1 384862265 12329337 complement(1746243..1747529) 1 NC_017341.1 glutamate-1-semialdehyde aminotransferase 1747529 hemL 12329337 hemL Staphylococcus aureus subsp. aureus str. JKD6008 glutamate-1-semialdehyde aminotransferase YP_005744985.1 1746243 R 546342 CDS YP_005744986.1 384862266 12329338 complement(1747577..1748551) 1 NC_017341.1 delta-aminolevulinic acid dehydratase 1748551 hemB 12329338 hemB Staphylococcus aureus subsp. aureus str. JKD6008 delta-aminolevulinic acid dehydratase YP_005744986.1 1747577 R 546342 CDS YP_005744987.1 384862267 12329339 complement(1748554..1749222) 1 NC_017341.1 uroporphyrinogen III synthase HEM4 1749222 hemD 12329339 hemD Staphylococcus aureus subsp. aureus str. JKD6008 uroporphyrinogen III synthase HEM4 YP_005744987.1 1748554 R 546342 CDS YP_005744988.1 384862268 12329340 complement(1749244..1750170) 1 NC_017341.1 hydroxymethylbilane synthase 1750170 hemC 12329340 hemC Staphylococcus aureus subsp. aureus str. JKD6008 hydroxymethylbilane synthase YP_005744988.1 1749244 R 546342 CDS YP_005744989.1 384862269 12329341 complement(1750212..1751027) 1 NC_017341.1 hemA concentration negative effector hemX 1751027 hemX 12329341 hemX Staphylococcus aureus subsp. aureus str. JKD6008 hemA concentration negative effector hemX YP_005744989.1 1750212 R 546342 CDS YP_005744990.1 384862270 12329342 complement(1751049..1752395) 1 NC_017341.1 glutamyl-tRNA reductase 1752395 hemA 12329342 hemA Staphylococcus aureus subsp. aureus str. JKD6008 glutamyl-tRNA reductase YP_005744990.1 1751049 R 546342 CDS YP_005744991.1 384862271 12329343 complement(1752612..1753202) 1 NC_017341.1 ribosome biogenesis GTP-binding protein YsxC 1753202 engB 12329343 engB Staphylococcus aureus subsp. aureus str. JKD6008 ribosome biogenesis GTP-binding protein YsxC YP_005744991.1 1752612 R 546342 CDS YP_005744992.1 384862272 12329344 complement(1753356..1754618) 1 NC_017341.1 ATP-dependent Clp protease ATP-binding subunit ClpX 1754618 clpX 12329344 clpX Staphylococcus aureus subsp. aureus str. JKD6008 ATP-dependent Clp protease ATP-binding subunit ClpX YP_005744992.1 1753356 R 546342 CDS YP_005744993.1 384862273 12329345 complement(1754769..1756079) 1 NC_017341.1 trigger factor (prolyl isomerase) 1756079 tig 12329345 tig Staphylococcus aureus subsp. aureus str. JKD6008 trigger factor (prolyl isomerase) YP_005744993.1 1754769 R 546342 CDS YP_005744994.1 384862274 12329346 complement(1756242..1757171) 1 NC_017341.1 hypothetical protein 1757171 12329346 SAA6008_01644 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005744994.1 1756242 R 546342 CDS YP_005744995.1 384862275 12329347 complement(1757190..1757798) 1 NC_017341.1 MutT/Nudix hydrolase family protein 1757798 12329347 SAA6008_01645 Staphylococcus aureus subsp. aureus str. JKD6008 MutT/Nudix hydrolase family protein YP_005744995.1 1757190 R 546342 CDS YP_005744996.1 384862276 12329348 complement(1757940..1758296) 1 NC_017341.1 50S ribosomal protein L20 1758296 rplT 12329348 rplT Staphylococcus aureus subsp. aureus str. JKD6008 50S ribosomal protein L20 YP_005744996.1 1757940 R 546342 CDS YP_005744997.1 384862277 12329349 complement(1758343..1758543) 1 NC_017341.1 50S ribosomal protein L35 1758543 rpmI 12329349 rpmI Staphylococcus aureus subsp. aureus str. JKD6008 50S ribosomal protein L35 YP_005744997.1 1758343 R 546342 CDS YP_005744998.1 384862278 12329350 complement(1758572..1759099) 1 NC_017341.1 translation initiation factor IF-3 1759099 infC 12329350 infC Staphylococcus aureus subsp. aureus str. JKD6008 translation initiation factor IF-3 YP_005744998.1 1758572 R 546342 CDS YP_005744999.1 384862279 12329351 complement(1759328..1760821) 1 NC_017341.1 APC family amino acid-polyamine-organocation transporter 1760821 lysP 12329351 lysP Staphylococcus aureus subsp. aureus str. JKD6008 APC family amino acid-polyamine-organocation transporter YP_005744999.1 1759328 R 546342 CDS YP_005745000.1 384862280 12329352 complement(1761247..1763184) 1 NC_017341.1 threonyl-tRNA synthetase 1 1763184 thrS 12329352 thrS Staphylococcus aureus subsp. aureus str. JKD6008 threonyl-tRNA synthetase 1 YP_005745000.1 1761247 R 546342 CDS YP_005745001.1 384862281 12329353 complement(1763597..1764517) 1 NC_017341.1 putative primosomal protein 1764517 dnaI 12329353 dnaI Staphylococcus aureus subsp. aureus str. JKD6008 putative primosomal protein YP_005745001.1 1763597 R 546342 CDS YP_005745002.1 384862282 12329354 complement(1764517..1765917) 1 NC_017341.1 chromosome replication initiation and membrane attachment protein 1765917 dnaB 12329354 dnaB Staphylococcus aureus subsp. aureus str. JKD6008 chromosome replication initiation and membrane attachment protein YP_005745002.1 1764517 R 546342 CDS YP_005745003.1 384862283 12329355 complement(1765918..1766388) 1 NC_017341.1 transcriptional regulator NrdR 1766388 nrdR 12329355 nrdR Staphylococcus aureus subsp. aureus str. JKD6008 transcriptional regulator NrdR YP_005745003.1 1765918 R 546342 CDS YP_005745004.1 384862284 12329356 complement(1766598..1767623) 1 NC_017341.1 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) 1767623 gapB 12329356 gapB Staphylococcus aureus subsp. aureus str. JKD6008 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) YP_005745004.1 1766598 R 546342 CDS YP_005745005.1 384862285 12329357 complement(1767793..1768416) 1 NC_017341.1 putative dephospho-CoA kinase 1768416 coaE 12329357 coaE Staphylococcus aureus subsp. aureus str. JKD6008 putative dephospho-CoA kinase YP_005745005.1 1767793 R 546342 CDS YP_005745006.1 384862286 12329358 complement(1768432..1769304) 1 NC_017341.1 TIGRFAM: formamidopyrimidine-DNA glycosylase PFAM: Formamidopyrimidine-DNA glycolase KEGG: sar:SAR1768 formamidopyrimidine-DNA glycosylase; formamidopyrimidine-DNA glycosidase 1769304 fpg 12329358 fpg Staphylococcus aureus subsp. aureus str. JKD6008 formamidopyrimidine-DNA glycosidase YP_005745006.1 1768432 R 546342 CDS YP_005745007.1 384862287 12329359 complement(1769320..1771950) 1 NC_017341.1 DNA-directed DNA polymerase I 1771950 polA 12329359 polA Staphylococcus aureus subsp. aureus str. JKD6008 DNA-directed DNA polymerase I YP_005745007.1 1769320 R 546342 CDS YP_005745008.1 384862288 12329360 complement(1772244..1773731) 1 NC_017341.1 hypothetical protein 1773731 12329360 SAA6008_01658 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745008.1 1772244 R 546342 CDS YP_005745009.1 384862289 12329361 complement(1774230..1775870) 1 NC_017341.1 alkaline phosphatase synthesis sensor protein PhoR 1775870 phoR 12329361 phoR Staphylococcus aureus subsp. aureus str. JKD6008 alkaline phosphatase synthesis sensor protein PhoR YP_005745009.1 1774230 R 546342 CDS YP_005745010.1 384862290 12329362 complement(1775891..1776595) 1 NC_017341.1 response regulator OmpR 1776595 ompR 12329362 ompR Staphylococcus aureus subsp. aureus str. JKD6008 response regulator OmpR YP_005745010.1 1775891 R 546342 CDS YP_005745011.1 384862291 12329363 complement(1776985..1778253) 1 NC_017341.1 isocitrate dehydrogenase 1778253 citC 12329363 citC Staphylococcus aureus subsp. aureus str. JKD6008 isocitrate dehydrogenase YP_005745011.1 1776985 R 546342 CDS YP_005745012.1 384862292 12329364 complement(1778302..1779423) 1 NC_017341.1 methylcitrate synthase 1779423 citZ 12329364 citZ Staphylococcus aureus subsp. aureus str. JKD6008 methylcitrate synthase YP_005745012.1 1778302 R 546342 CDS YP_005745013.1 384862293 12329365 1779771..1781132 1 NC_017341.1 putative D-serine/D-alanine/glycine transporter 1781132 12329365 SAA6008_01663 Staphylococcus aureus subsp. aureus str. JKD6008 putative D-serine/D-alanine/glycine transporter YP_005745013.1 1779771 D 546342 CDS YP_005745014.1 384862294 12329367 complement(1781989..1782816) 1 NC_017341.1 putative transposase for IS1272 1782816 12329367 SAA6008_01665 Staphylococcus aureus subsp. aureus str. JKD6008 putative transposase for IS1272 YP_005745014.1 1781989 R 546342 CDS YP_005745015.1 384862295 12329368 complement(1783457..1785214) 1 NC_017341.1 pyruvate kinase 1785214 pykA 12329368 pykA Staphylococcus aureus subsp. aureus str. JKD6008 pyruvate kinase YP_005745015.1 1783457 R 546342 CDS YP_005745016.1 384862296 12329369 complement(1785236..1786204) 1 NC_017341.1 6-phosphofructokinase 1786204 pfkA 12329369 pfkA Staphylococcus aureus subsp. aureus str. JKD6008 6-phosphofructokinase YP_005745016.1 1785236 R 546342 CDS YP_005745017.1 384862297 12329370 complement(1786473..1787417) 1 NC_017341.1 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha 1787417 accA 12329370 accA Staphylococcus aureus subsp. aureus str. JKD6008 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha YP_005745017.1 1786473 R 546342 CDS YP_005745018.1 384862298 12329371 complement(1787417..1788274) 1 NC_017341.1 acetyl-coenzyme A carboxylase carboxyl transferase subunit beta 1788274 accD 12329371 accD Staphylococcus aureus subsp. aureus str. JKD6008 acetyl-coenzyme A carboxylase carboxyl transferase subunit beta YP_005745018.1 1787417 R 546342 CDS YP_005745019.1 384862299 12329372 complement(1788469..1789698) 1 NC_017341.1 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) 1789698 maeB 12329372 maeB Staphylococcus aureus subsp. aureus str. JKD6008 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) YP_005745019.1 1788469 R 546342 CDS YP_005745020.1 384862300 12329373 complement(1790148..1793345) 1 NC_017341.1 DNA-directed DNA polymerase III subunit alpha 1793345 dnaE 12329373 dnaE Staphylococcus aureus subsp. aureus str. JKD6008 DNA-directed DNA polymerase III subunit alpha YP_005745020.1 1790148 R 546342 CDS YP_005745021.1 384862301 12329374 complement(1793366..1794307) 1 NC_017341.1 exopolyphosphatase-like protein 1794307 12329374 SAA6008_01672 Staphylococcus aureus subsp. aureus str. JKD6008 exopolyphosphatase-like protein YP_005745021.1 1793366 R 546342 CDS YP_005745022.1 384862302 12329375 complement(1794568..1795866) 1 NC_017341.1 identified by match to protein family HMM PF00571; match to protein family HMM PF03061; match to protein family HMM PF07085; transcriptional regulator 1795866 12329375 SAA6008_01673 Staphylococcus aureus subsp. aureus str. JKD6008 transcriptional regulator YP_005745022.1 1794568 R 546342 CDS YP_005745023.1 384862303 12329376 1796071..1796484 1 NC_017341.1 universal stress protein 1796484 uspA_2 12329376 uspA_2 Staphylococcus aureus subsp. aureus str. JKD6008 universal stress protein YP_005745023.1 1796071 D 546342 CDS YP_005745024.1 384862304 12329377 complement(1796789..1797478) 1 NC_017341.1 metal-dependent hydrolase 1797478 12329377 SAA6008_01675 Staphylococcus aureus subsp. aureus str. JKD6008 metal-dependent hydrolase YP_005745024.1 1796789 R 546342 CDS YP_005745025.1 384862305 12329378 1797653..1798708 1 NC_017341.1 PFAM: creatinase; peptidase M24 KEGG: sas:SAS1635 putative metallopeptidase; putative conserved peptidase 1798708 12329378 SAA6008_01676 Staphylococcus aureus subsp. aureus str. JKD6008 putative conserved peptidase YP_005745025.1 1797653 D 546342 CDS YP_005745026.1 384862306 12329379 complement(1799024..1800163) 1 NC_017341.1 alanine dehydrogenase 1800163 ald 12329379 ald Staphylococcus aureus subsp. aureus str. JKD6008 alanine dehydrogenase YP_005745026.1 1799024 R 546342 CDS YP_005745027.1 384862307 12329380 1800283..1800783 1 NC_017341.1 UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general 'stress endurance' activity.; universal stress protein 1800783 uspA_1 12329380 uspA_1 Staphylococcus aureus subsp. aureus str. JKD6008 universal stress protein YP_005745027.1 1800283 D 546342 CDS YP_005745028.1 384862308 12329381 complement(1801029..1802231) 1 NC_017341.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 1802231 ackA 12329381 ackA Staphylococcus aureus subsp. aureus str. JKD6008 acetate kinase YP_005745028.1 1801029 R 546342 CDS YP_005745029.1 384862309 12329382 complement(1802319..1803266) 1 NC_017341.1 Adenine-specific DNA methylase-like protein 1803266 12329382 SAA6008_01680 Staphylococcus aureus subsp. aureus str. JKD6008 Adenine-specific DNA methylase-like protein YP_005745029.1 1802319 R 546342 CDS YP_005745030.1 384862310 12329383 complement(1803389..1803883) 1 NC_017341.1 thiol peroxidase 1803883 tpx 12329383 tpx Staphylococcus aureus subsp. aureus str. JKD6008 thiol peroxidase YP_005745030.1 1803389 R 546342 CDS YP_005745031.1 384862311 12329384 complement(1803981..1804751) 1 NC_017341.1 sulfite exporter TauE/SafE-like protein 1804751 12329384 SAA6008_01682 Staphylococcus aureus subsp. aureus str. JKD6008 sulfite exporter TauE/SafE-like protein YP_005745031.1 1803981 R 546342 CDS YP_005745032.1 384862312 12329385 complement(1804795..1806018) 1 NC_017341.1 thiamine biosynthesis protein ThiI 1806018 thiI 12329385 thiI Staphylococcus aureus subsp. aureus str. JKD6008 thiamine biosynthesis protein ThiI YP_005745032.1 1804795 R 546342 CDS YP_005745033.1 384862313 12329386 complement(1806018..1807157) 1 NC_017341.1 aminotransferase class-V protein; cysteine desulfurase 1807157 12329386 SAA6008_01684 Staphylococcus aureus subsp. aureus str. JKD6008 cysteine desulfurase YP_005745033.1 1806018 R 546342 CDS YP_005745034.1 384862314 12329387 1807321..1807455 1 NC_017341.1 hypothetical protein 1807455 12329387 SAA6008_01685 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745034.1 1807321 D 546342 CDS YP_005745035.1 384862315 12329388 complement(1807529..1809223) 1 NC_017341.1 acts to negatively regulates ftsZ ring formation by modulating the frequency and position of the ftsZ ring formation; septation ring formation regulator 1809223 ezrA 12329388 ezrA Staphylococcus aureus subsp. aureus str. JKD6008 septation ring formation regulator YP_005745035.1 1807529 R 546342 CDS YP_005745036.1 384862316 12329389 1809360..1809824 1 NC_017341.1 GAF domain-containing protein 1809824 12329389 SAA6008_01687 Staphylococcus aureus subsp. aureus str. JKD6008 GAF domain-containing protein YP_005745036.1 1809360 D 546342 CDS YP_005745037.1 384862317 12329390 1810068..1810670 1 NC_017341.1 30S ribosomal protein S4 1810670 rpsD 12329390 rpsD Staphylococcus aureus subsp. aureus str. JKD6008 30S ribosomal protein S4 YP_005745037.1 1810068 D 546342 CDS YP_005745038.1 384862318 12329391 complement(1810886..1811629) 1 NC_017341.1 PFAM: glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 1811629 12329391 SAA6008_01689 Staphylococcus aureus subsp. aureus str. JKD6008 glycerophosphoryl diester phosphodiesterase YP_005745038.1 1810886 R 546342 CDS YP_005745039.1 384862319 12329392 1811709..1812155 1 NC_017341.1 related to the OsmC family of osmotically/stress induced proteins; organic hydroperoxide resistance protein 1812155 ohr 12329392 ohr Staphylococcus aureus subsp. aureus str. JKD6008 organic hydroperoxide resistance protein YP_005745039.1 1811709 D 546342 CDS YP_005745040.1 384862320 12329393 1812269..1813429 1 NC_017341.1 putative soluble hydrogenase subunit 1813429 12329393 SAA6008_01691 Staphylococcus aureus subsp. aureus str. JKD6008 putative soluble hydrogenase subunit YP_005745040.1 1812269 D 546342 CDS YP_005745041.1 384862321 12329394 1813416..1815020 1 NC_017341.1 D-3-phosphoglycerate dehydrogenase 1815020 serA 12329394 serA Staphylococcus aureus subsp. aureus str. JKD6008 D-3-phosphoglycerate dehydrogenase YP_005745041.1 1813416 D 546342 CDS YP_005745042.1 384862322 12329395 complement(1815170..1816300) 1 NC_017341.1 hypothetical protein 1816300 12329395 SAA6008_01693 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745042.1 1815170 R 546342 CDS YP_005745043.1 384862323 12329396 complement(1816407..1817873) 1 NC_017341.1 phosphotransferase system, N-acetylglucosamine-specific IIBC component 1817873 ptaA 12329396 ptaA Staphylococcus aureus subsp. aureus str. JKD6008 phosphotransferase system, N-acetylglucosamine-specific IIBC component YP_005745043.1 1816407 R 546342 CDS YP_005745044.1 384862324 12329397 complement(1818001..1818609) 1 NC_017341.1 1-acyl-sn-glycerol-3-phosphate acyltransferase 1818609 plsC 12329397 plsC Staphylococcus aureus subsp. aureus str. JKD6008 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_005745044.1 1818001 R 546342 CDS YP_005745045.1 384862325 12329398 1818790..1820064 1 NC_017341.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap SMART: PDZ/DHR/GLGF domain protein KEGG: sao:SAOUHSC_01838 hypothetical protein; Trypsin-like serine endoprotease 1820064 12329398 SAA6008_01696 Staphylococcus aureus subsp. aureus str. JKD6008 Trypsin-like serine endoprotease YP_005745045.1 1818790 D 546342 CDS YP_005745046.1 384862326 12329399 complement(1820158..1821420) 1 NC_017341.1 tyrosyl-tRNA synthetase, TyrS 1821420 tyrS 12329399 tyrS Staphylococcus aureus subsp. aureus str. JKD6008 tyrosyl-tRNA synthetase, TyrS YP_005745046.1 1820158 R 546342 CDS YP_005745047.1 384862327 12329401 complement(1822910..1825597) 1 NC_017341.1 identified by match to protein family HMM PF04650; match to protein family HMM PF05031; match to protein family HMM TIGR01167; match to protein family HMM TIGR01168; haptoglobin-binding surface anchored protein, HarA 1825597 harA 12329401 harA Staphylococcus aureus subsp. aureus str. JKD6008 haptoglobin-binding surface anchored protein, HarA YP_005745047.1 1822910 R 546342 CDS YP_005745048.1 384862328 12329402 complement(1825930..1827597) 1 NC_017341.1 formyltetrahydrofolate synthetase 1827597 fhs 12329402 fhs Staphylococcus aureus subsp. aureus str. JKD6008 formyltetrahydrofolate synthetase YP_005745048.1 1825930 R 546342 CDS YP_005745049.1 384862329 12329403 complement(1828037..1829743) 1 NC_017341.1 acetyl-coenzyme A synthetase 1829743 acsA 12329403 acsA Staphylococcus aureus subsp. aureus str. JKD6008 acetyl-coenzyme A synthetase YP_005745049.1 1828037 R 546342 CDS YP_005745050.1 384862330 12329404 1829912..1830544 1 NC_017341.1 acetoin dehydrogenase-like protein 1830544 acuA 12329404 acuA Staphylococcus aureus subsp. aureus str. JKD6008 acetoin dehydrogenase-like protein YP_005745050.1 1829912 D 546342 CDS YP_005745051.1 384862331 12329405 1830569..1831738 1 NC_017341.1 histone deacetylase family protein 1831738 acuC 12329405 acuC Staphylococcus aureus subsp. aureus str. JKD6008 histone deacetylase family protein YP_005745051.1 1830569 D 546342 CDS YP_005745052.1 384862332 12329406 complement(1831836..1832825) 1 NC_017341.1 global transcriptional regulator, catabolite control protein A 1832825 ccpA 12329406 ccpA Staphylococcus aureus subsp. aureus str. JKD6008 global transcriptional regulator, catabolite control protein A YP_005745052.1 1831836 R 546342 CDS YP_005745053.1 384862333 12329407 complement(1833365..1834456) 1 NC_017341.1 catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase 1834456 12329407 SAA6008_01707 Staphylococcus aureus subsp. aureus str. JKD6008 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase YP_005745053.1 1833365 R 546342 CDS YP_005745054.1 384862334 12329408 1834803..1835975 1 NC_017341.1 transposase for IS256 1835975 12329408 SAA6008_01708 Staphylococcus aureus subsp. aureus str. JKD6008 transposase for IS256 YP_005745054.1 1834803 D 546342 CDS YP_005745055.1 384862335 12329409 complement(1836489..1837688) 1 NC_017341.1 hypothetical protein 1837688 12329409 SAA6008_01709 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745055.1 1836489 R 546342 CDS YP_005745056.1 384862336 12329410 complement(1837762..1838253) 1 NC_017341.1 general stress protein 1838253 12329410 SAA6008_01710 Staphylococcus aureus subsp. aureus str. JKD6008 general stress protein YP_005745056.1 1837762 R 546342 CDS YP_005745057.1 384862337 12329411 complement(1838327..1839640) 1 NC_017341.1 UDP-N-acetylmuramate--L-alanine ligase 1839640 murC 12329411 murC Staphylococcus aureus subsp. aureus str. JKD6008 UDP-N-acetylmuramate--L-alanine ligase YP_005745057.1 1838327 R 546342 CDS YP_005745058.1 384862338 12329412 complement(1839664..1843488) 1 NC_017341.1 FtsK/SpoIIIE (DNA translocase stage III) family protein 1843488 12329412 SAA6008_01712 Staphylococcus aureus subsp. aureus str. JKD6008 FtsK/SpoIIIE (DNA translocase stage III) family protein YP_005745058.1 1839664 R 546342 CDS YP_005745059.1 384862339 12329413 complement(1843509..1844105) 1 NC_017341.1 phenylalanyl-tRNA synthetase (beta subunit) 1844105 pheT2 12329413 pheT2 Staphylococcus aureus subsp. aureus str. JKD6008 phenylalanyl-tRNA synthetase (beta subunit) YP_005745059.1 1843509 R 546342 CDS YP_005745060.1 384862340 12329414 complement(1844134..1844991) 1 NC_017341.1 hypothetical protein 1844991 12329414 SAA6008_01714 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745060.1 1844134 R 546342 CDS YP_005745061.1 384862341 12329415 complement(1845091..1845402) 1 NC_017341.1 thioredoxin family protein 1845402 12329415 SAA6008_01715 Staphylococcus aureus subsp. aureus str. JKD6008 thioredoxin family protein YP_005745061.1 1845091 R 546342 CDS YP_005745062.1 384862342 12329416 complement(1845467..1846543) 1 NC_017341.1 M42 family glutamyl aminopeptidase 1846543 pepA1 12329416 pepA1 Staphylococcus aureus subsp. aureus str. JKD6008 M42 family glutamyl aminopeptidase YP_005745062.1 1845467 R 546342 CDS YP_005745063.1 384862343 12329417 1846630..1846941 1 NC_017341.1 putative secreted propeptide peptidase 1846941 12329417 SAA6008_01717 Staphylococcus aureus subsp. aureus str. JKD6008 putative secreted propeptide peptidase YP_005745063.1 1846630 D 546342 CDS YP_005745064.1 384862344 12329418 complement(1847066..1847908) 1 NC_017341.1 metallo-beta-lactamase family protein 1847908 12329418 SAA6008_01718 Staphylococcus aureus subsp. aureus str. JKD6008 metallo-beta-lactamase family protein YP_005745064.1 1847066 R 546342 CDS YP_005745065.1 384862345 12329419 1848433..1848918 1 NC_017341.1 IS200-family transposase 1848918 12329419 SAA6008_01719 Staphylococcus aureus subsp. aureus str. JKD6008 IS200-family transposase YP_005745065.1 1848433 D 546342 CDS YP_005745066.1 384862346 12329420 complement(1849120..1849764) 1 NC_017341.1 TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase PFAM: putative methyltransferase KEGG: sao:SAOUHSC_01865 hypothetical protein; tRNA (guanine-N(7)-)-methyltransferase, TrmB 1849764 trmB 12329420 trmB Staphylococcus aureus subsp. aureus str. JKD6008 tRNA (guanine-N(7)-)-methyltransferase, TrmB YP_005745066.1 1849120 R 546342 CDS YP_005745067.1 384862347 12329421 complement(1849779..1850570) 1 NC_017341.1 PFAM: aminoglycoside phosphotransferase KEGG: sac:SACOL1799 hypothetical protein; phosphotransferase family protein 1850570 12329421 SAA6008_01721 Staphylococcus aureus subsp. aureus str. JKD6008 phosphotransferase family protein YP_005745067.1 1849779 R 546342 CDS YP_005745068.1 384862348 12329422 complement(1851120..1851968) 1 NC_017341.1 putative D-alanine aminotransferase 1851968 dat 12329422 dat Staphylococcus aureus subsp. aureus str. JKD6008 putative D-alanine aminotransferase YP_005745068.1 1851120 R 546342 CDS YP_005745069.1 384862349 12329423 complement(1851972..1853381) 1 NC_017341.1 Peptidase family M20/M25/M40 1853381 12329423 SAA6008_01723 Staphylococcus aureus subsp. aureus str. JKD6008 Peptidase family M20/M25/M40 YP_005745069.1 1851972 R 546342 CDS YP_005745070.1 384862350 12329424 complement(1854139..1854516) 1 NC_017341.1 hypothetical protein 1854516 12329424 SAA6008_01724 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745070.1 1854139 R 546342 CDS YP_005745071.1 384862351 12329425 complement(1854533..1855228) 1 NC_017341.1 ribosomal small subunit pseudouridine synthase A 1855228 rsuA 12329425 rsuA Staphylococcus aureus subsp. aureus str. JKD6008 ribosomal small subunit pseudouridine synthase A YP_005745071.1 1854533 R 546342 CDS YP_005745072.1 384862352 12329426 complement(1855225..1856886) 1 NC_017341.1 putative polysaccharide biosynthesis protein 1856886 12329426 SAA6008_01726 Staphylococcus aureus subsp. aureus str. JKD6008 putative polysaccharide biosynthesis protein YP_005745072.1 1855225 R 546342 CDS YP_005745073.1 384862353 12329427 1857293..1858561 1 NC_017341.1 putative flavoprotein 1858561 12329427 SAA6008_01727 Staphylococcus aureus subsp. aureus str. JKD6008 putative flavoprotein YP_005745073.1 1857293 D 546342 CDS YP_005745074.1 384862354 12329428 complement(1858678..1865238) 1 NC_017341.1 TIGRFAM: LPXTG-motif cell wall anchor domain PFAM: YSIRK Gram-positive signal peptide; protein of unknown function DUF1542; sugar-binding domain protein KEGG: sau:SA1577 hypothetical protein; cell-wall-anchored protein SasC 1865238 sasC 12329428 sasC Staphylococcus aureus subsp. aureus str. JKD6008 cell-wall-anchored protein SasC YP_005745074.1 1858678 R 546342 CDS YP_005745075.1 384862355 12329429 complement(1865564..1865875) 1 NC_017341.1 rhodanese domain-containing protein 1865875 12329429 SAA6008_01729 Staphylococcus aureus subsp. aureus str. JKD6008 rhodanese domain-containing protein YP_005745075.1 1865564 R 546342 CDS YP_005745076.1 384862356 12329430 complement(1865897..1868311) 1 NC_017341.1 leucyl-tRNA synthetase 1868311 leuS 12329430 leuS Staphylococcus aureus subsp. aureus str. JKD6008 leucyl-tRNA synthetase YP_005745076.1 1865897 R 546342 CDS YP_005745077.1 384862357 12329431 complement(1868602..1869783) 1 NC_017341.1 multidrug resistance transporter protein B 1869783 12329431 SAA6008_01731 Staphylococcus aureus subsp. aureus str. JKD6008 multidrug resistance transporter protein B YP_005745077.1 1868602 R 546342 CDS YP_005745078.1 384862358 12329432 1869893..1870846 1 NC_017341.1 contains a radical SAM superfamily domain; putative Fe-S oxidoreductase 1870846 12329432 SAA6008_01732 Staphylococcus aureus subsp. aureus str. JKD6008 putative Fe-S oxidoreductase YP_005745078.1 1869893 D 546342 CDS YP_005745079.1 384862359 12329433 1870843..1871406 1 NC_017341.1 putative rRNA methylase 1871406 12329433 SAA6008_01733 Staphylococcus aureus subsp. aureus str. JKD6008 putative rRNA methylase YP_005745079.1 1870843 D 546342 CDS YP_005745080.1 384862360 12329434 complement(1871526..1871927) 1 NC_017341.1 TIGRFAM: staphylococcal accessory regulator family PFAM: regulatory protein, MarR; repressor of toxins, Rot 1871927 rot 12329434 rot Staphylococcus aureus subsp. aureus str. JKD6008 repressor of toxins, Rot YP_005745080.1 1871526 R 546342 CDS YP_005745081.1 384862361 12329435 complement(1872447..1872671) 1 NC_017341.1 hypothetical protein 1872671 12329435 SAA6008_01735 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745081.1 1872447 R 546342 CDS YP_005745082.1 384862362 12329436 complement(1872668..1873141) 1 NC_017341.1 truncated transposase for IS1272 1873141 12329436 SAA6008_01736 Staphylococcus aureus subsp. aureus str. JKD6008 truncated transposase for IS1272 YP_005745082.1 1872668 R 546342 CDS YP_005745083.1 384862363 12329437 complement(1873508..1874335) 1 NC_017341.1 lysophospholipase 1874335 pldB 12329437 pldB Staphylococcus aureus subsp. aureus str. JKD6008 lysophospholipase YP_005745083.1 1873508 R 546342 CDS YP_005745084.1 384862364 12329438 complement(1874338..1874454) 1 NC_017341.1 hypothetical protein 1874454 12329438 SAA6008_01738 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745084.1 1874338 R 546342 CDS YP_005745085.1 384862365 12329439 1874569..1875570 1 NC_017341.1 proline dehydrogenase 1875570 putA 12329439 putA Staphylococcus aureus subsp. aureus str. JKD6008 proline dehydrogenase YP_005745085.1 1874569 D 546342 CDS YP_005745086.1 384862366 12329440 complement(1875692..1876156) 1 NC_017341.1 6,7-dimethyl-8-ribityllumazine synthase 1876156 ribH 12329440 ribH Staphylococcus aureus subsp. aureus str. JKD6008 6,7-dimethyl-8-ribityllumazine synthase YP_005745086.1 1875692 R 546342 CDS YP_005745087.1 384862367 12329441 complement(1876169..1877350) 1 NC_017341.1 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II 1877350 ribA 12329441 ribA Staphylococcus aureus subsp. aureus str. JKD6008 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II YP_005745087.1 1876169 R 546342 CDS YP_005745088.1 384862368 12329442 complement(1877361..1877993) 1 NC_017341.1 riboflavin synthase subunit alpha 1877993 ribB 12329442 ribB Staphylococcus aureus subsp. aureus str. JKD6008 riboflavin synthase subunit alpha YP_005745088.1 1877361 R 546342 CDS YP_005745089.1 384862369 12329443 complement(1878000..1879031) 1 NC_017341.1 bifunctional pyrimidine reductase / riboflavin biosynthesis protein 1879031 ribD 12329443 ribD Staphylococcus aureus subsp. aureus str. JKD6008 bifunctional pyrimidine reductase / riboflavin biosynthesis protein YP_005745089.1 1878000 R 546342 CDS YP_005745090.1 384862370 12329444 complement(1879524..1881026) 1 NC_017341.1 pyridine nucleotide-disulfide oxidoreductase 1881026 12329444 SAA6008_01744 Staphylococcus aureus subsp. aureus str. JKD6008 pyridine nucleotide-disulfide oxidoreductase YP_005745090.1 1879524 R 546342 CDS YP_005745091.1 384862371 12329445 1881863..1883155 1 NC_017341.1 arsenical pump membrane protein 1883155 arsB 12329445 arsB Staphylococcus aureus subsp. aureus str. JKD6008 arsenical pump membrane protein YP_005745091.1 1881863 D 546342 CDS YP_005745092.1 384862372 12329446 1883173..1883568 1 NC_017341.1 arsenate reductase (glutaredoxin) 1883568 arsC 12329446 arsC Staphylococcus aureus subsp. aureus str. JKD6008 arsenate reductase (glutaredoxin) YP_005745092.1 1883173 D 546342 CDS YP_005745093.1 384862373 12329447 complement(1883863..1884750) 1 NC_017341.1 beta-N-acetylglucosaminidase 1884750 12329447 SAA6008_01747 Staphylococcus aureus subsp. aureus str. JKD6008 beta-N-acetylglucosaminidase YP_005745093.1 1883863 R 546342 CDS YP_005745094.1 384862374 12329448 complement(1884993..1885217) 1 NC_017341.1 hypothetical protein 1885217 12329448 SAA6008_01748 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745094.1 1884993 R 546342 CDS YP_005745095.1 384862375 12329449 1885330..1886502 1 NC_017341.1 transposase for IS256 1886502 12329449 SAA6008_01749 Staphylococcus aureus subsp. aureus str. JKD6008 transposase for IS256 YP_005745095.1 1885330 D 546342 CDS YP_005745096.1 384862376 12329450 1886572..1887138 1 NC_017341.1 N-term is truncated by 23aa compared to its orthologs; hypothetical protein 1887138 12329450 SAA6008_01750 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745096.1 1886572 D 546342 CDS YP_005745097.1 384862377 12329451 complement(1887578..1888291) 1 NC_017341.1 putative translaldolase 1888291 tal 12329451 tal Staphylococcus aureus subsp. aureus str. JKD6008 putative translaldolase YP_005745097.1 1887578 R 546342 CDS YP_005745098.1 384862378 12329452 1888704..1888853 1 NC_017341.1 hypothetical protein 1888853 12329452 SAA6008_01752 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745098.1 1888704 D 546342 CDS YP_005745099.1 384862379 12329453 1889109..1889474 1 NC_017341.1 camphor resistance protein CrcB 1889474 crcB 12329453 crcB Staphylococcus aureus subsp. aureus str. JKD6008 camphor resistance protein CrcB YP_005745099.1 1889109 D 546342 CDS YP_005745100.1 384862380 12329454 1889471..1889824 1 NC_017341.1 camphor resistance protein CrcB_1 1889824 crcB_1 12329454 crcB_1 Staphylococcus aureus subsp. aureus str. JKD6008 camphor resistance protein CrcB_1 YP_005745100.1 1889471 D 546342 CDS YP_005745101.1 384862381 12329456 1891003..1892175 1 NC_017341.1 transposase for IS256 1892175 12329456 SAA6008_01756 Staphylococcus aureus subsp. aureus str. JKD6008 transposase for IS256 YP_005745101.1 1891003 D 546342 CDS YP_005745102.1 384862382 12329457 1892421..1892891 1 NC_017341.1 TIGRFAM: RNA polymerase sigma-70 PFAM: sigma-70 region 2 domain protein KEGG: saa:SAUSA300_1722 hypothetical protein; RNA polymerase factor sigma-70 1892891 12329457 SAA6008_01757 Staphylococcus aureus subsp. aureus str. JKD6008 RNA polymerase factor sigma-70 YP_005745102.1 1892421 D 546342 CDS YP_005745103.1 384862383 12329458 1893004..1893447 1 NC_017341.1 Some domain similarity with ComK, Genetic competence transcription factor; hypothetical protein 1893447 12329458 SAA6008_01758 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745103.1 1893004 D 546342 CDS YP_005745104.1 384862384 12329459 complement(1893434..1893877) 1 NC_017341.1 hypothetical protein 1893877 12329459 SAA6008_01759 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745104.1 1893434 R 546342 CDS YP_005745105.1 384862385 12329460 1894332..1895504 1 NC_017341.1 transposase for IS256 1895504 12329460 SAA6008_01760 Staphylococcus aureus subsp. aureus str. JKD6008 transposase for IS256 YP_005745105.1 1894332 D 546342 CDS YP_005745106.1 384862386 12329462 1895897..1896505 1 NC_017341.1 truncated transposase for IS1272 1896505 12329462 SAA6008_01762 Staphylococcus aureus subsp. aureus str. JKD6008 truncated transposase for IS1272 YP_005745106.1 1895897 D 546342 CDS YP_005745107.1 384862387 12329463 complement(1896568..1897401) 1 NC_017341.1 aldo/keto reductase 1897401 12329463 SAA6008_01763 Staphylococcus aureus subsp. aureus str. JKD6008 aldo/keto reductase YP_005745107.1 1896568 R 546342 CDS YP_005745108.1 384862388 12329464 complement(1897613..1898521) 1 NC_017341.1 hypothetical protein 1898521 12329464 SAA6008_01764 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745108.1 1897613 R 546342 CDS YP_005745109.1 384862389 12329465 complement(1898646..1899839) 1 NC_017341.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 1899839 metK 12329465 metK Staphylococcus aureus subsp. aureus str. JKD6008 S-adenosylmethionine synthetase YP_005745109.1 1898646 R 546342 CDS YP_005745110.1 384862390 12329466 1900210..1901802 1 NC_017341.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 1901802 pckA 12329466 pckA Staphylococcus aureus subsp. aureus str. JKD6008 phosphoenolpyruvate carboxykinase YP_005745110.1 1900210 D 546342 CDS YP_005745111.1 384862391 12329467 complement(1901938..1902423) 1 NC_017341.1 IS200-family transposase 1902423 12329467 SAA6008_01767 Staphylococcus aureus subsp. aureus str. JKD6008 IS200-family transposase YP_005745111.1 1901938 R 546342 CDS YP_005745112.1 384862392 12329468 complement(1902798..1903568) 1 NC_017341.1 prolyl oligopeptidase 1903568 12329468 SAA6008_01768 Staphylococcus aureus subsp. aureus str. JKD6008 prolyl oligopeptidase YP_005745112.1 1902798 R 546342 CDS YP_005745113.1 384862393 12329469 complement(1903549..1904028) 1 NC_017341.1 NUDIX family hydrolase 1904028 12329469 SAA6008_01769 Staphylococcus aureus subsp. aureus str. JKD6008 NUDIX family hydrolase YP_005745113.1 1903549 R 546342 CDS YP_005745114.1 384862394 12329470 1904088..1904345 1 NC_017341.1 hypothetical protein 1904345 12329470 SAA6008_01770 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745114.1 1904088 D 546342 CDS YP_005745115.1 384862395 12329471 complement(1904342..1905343) 1 NC_017341.1 NAAAR, N-acylamino acid racemase 1905343 12329471 SAA6008_01771 Staphylococcus aureus subsp. aureus str. JKD6008 NAAAR, N-acylamino acid racemase YP_005745115.1 1904342 R 546342 CDS YP_005745116.1 384862396 12329472 complement(1905348..1906826) 1 NC_017341.1 O-succinylbenzoic acid--CoA ligase 1906826 12329472 SAA6008_01772 Staphylococcus aureus subsp. aureus str. JKD6008 O-succinylbenzoic acid--CoA ligase YP_005745116.1 1905348 R 546342 CDS YP_005745117.1 384862397 12329473 complement(1906985..1907425) 1 NC_017341.1 hypothetical protein 1907425 12329473 SAA6008_01773 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745117.1 1906985 R 546342 CDS YP_005745118.1 384862398 12329474 1907743..1908393 1 NC_017341.1 Excalibur extracellular calcium-binding domain protein 1908393 12329474 SAA6008_01774 Staphylococcus aureus subsp. aureus str. JKD6008 Excalibur extracellular calcium-binding domain protein YP_005745118.1 1907743 D 546342 CDS YP_005745119.1 384862399 12329475 1908474..1909469 1 NC_017341.1 low complexity sequence; hypothetical protein 1909469 12329475 SAA6008_01775 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745119.1 1908474 D 546342 CDS YP_005745120.1 384862400 12329476 1909545..1910171 1 NC_017341.1 hypothetical protein 1910171 12329476 SAA6008_01776 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745120.1 1909545 D 546342 CDS YP_005745121.1 384862401 12329477 1910212..1910556 1 NC_017341.1 hypothetical protein 1910556 12329477 SAA6008_01777 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745121.1 1910212 D 546342 CDS YP_005745122.1 384862402 12329478 1910654..1911205 1 NC_017341.1 hypothetical protein 1911205 12329478 SAA6008_01778 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745122.1 1910654 D 546342 CDS YP_005745123.1 384862403 12329479 complement(1911423..1912064) 1 NC_017341.1 hypothetical protein 1912064 12329479 SAA6008_01779 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745123.1 1911423 R 546342 CDS YP_005745124.1 384862404 12329480 complement(1912178..1912363) 1 NC_017341.1 hypothetical protein 1912363 12329480 SAA6008_01780 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745124.1 1912178 R 546342 CDS YP_005745125.1 384862405 12329481 complement(1912365..1912541) 1 NC_017341.1 hypothetical protein 1912541 12329481 SAA6008_01781 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745125.1 1912365 R 546342 CDS YP_005745126.1 384862406 12329482 complement(1912552..1912935) 1 NC_017341.1 hypothetical protein 1912935 12329482 SAA6008_01782 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745126.1 1912552 R 546342 CDS YP_005745127.1 384862407 12329484 complement(1914552..1914860) 1 NC_017341.1 hypothetical protein 1914860 12329484 SAA6008_01784 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745127.1 1914552 R 546342 CDS YP_005745128.1 384862408 12329485 complement(1915450..1916718) 1 NC_017341.1 hypothetical protein 1916718 12329485 SAA6008_01785 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745128.1 1915450 R 546342 CDS YP_005745129.1 384862409 12329486 1916781..1917953 1 NC_017341.1 transposase for IS256 1917953 12329486 SAA6008_01786 Staphylococcus aureus subsp. aureus str. JKD6008 transposase for IS256 YP_005745129.1 1916781 D 546342 CDS YP_005745130.1 384862410 12329487 1918018..1918182 1 NC_017341.1 hypothetical protein 1918182 12329487 SAA6008_01787 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745130.1 1918018 D 546342 CDS YP_005745131.1 384862411 12329496 complement(1920638..1921192) 1 NC_017341.1 predicted esterase of the alpha/beta hydrolase fold; hypothetical protein 1921192 12329496 SAA6008_01788 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745131.1 1920638 R 546342 CDS YP_005745132.1 384862412 12329497 complement(1921515..1922903) 1 NC_017341.1 catalyzes the formation of protoporphyrin IX from protoporphyrinogen IX; protoporphyrinogen oxidase 1922903 hemY 12329497 hemY Staphylococcus aureus subsp. aureus str. JKD6008 protoporphyrinogen oxidase YP_005745132.1 1921515 R 546342 CDS YP_005745133.1 384862413 12329498 complement(1922939..1923862) 1 NC_017341.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 1923862 hemH 12329498 hemH Staphylococcus aureus subsp. aureus str. JKD6008 ferrochelatase YP_005745133.1 1922939 R 546342 CDS YP_005745134.1 384862414 12331085 complement(1923920..1924957) 1 NC_017341.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 1924957 hemE 12331085 hemE Staphylococcus aureus subsp. aureus str. JKD6008 uroporphyrinogen decarboxylase YP_005745134.1 1923920 R 546342 CDS YP_005745135.1 384862415 12331086 1925220..1925723 1 NC_017341.1 RNAIII-activating protein TRAP 1925723 12331086 SAA6008_01792 Staphylococcus aureus subsp. aureus str. JKD6008 RNAIII-activating protein TRAP YP_005745135.1 1925220 D 546342 CDS YP_005745136.1 384862416 12331087 complement(1925847..1926974) 1 NC_017341.1 ABC-type exoprotein transport system, permease component 1926974 ecsB 12331087 ecsB Staphylococcus aureus subsp. aureus str. JKD6008 ABC-type exoprotein transport system, permease component YP_005745136.1 1925847 R 546342 CDS YP_005745137.1 384862417 12331088 complement(1927063..1927803) 1 NC_017341.1 multidrug ABC transporter 1927803 ccmA 12331088 ccmA Staphylococcus aureus subsp. aureus str. JKD6008 multidrug ABC transporter YP_005745137.1 1927063 R 546342 CDS YP_005745138.1 384862418 12331089 1927937..1928359 1 NC_017341.1 involved in cell-cycle regulation; HIT family hydrolase 1928359 hit 12331089 hit Staphylococcus aureus subsp. aureus str. JKD6008 HIT family hydrolase YP_005745138.1 1927937 D 546342 CDS YP_005745139.1 384862419 12331090 1928501..1928866 1 NC_017341.1 gas vesicle protein 1928866 gvpP 12331090 gvpP Staphylococcus aureus subsp. aureus str. JKD6008 gas vesicle protein YP_005745139.1 1928501 D 546342 CDS YP_005745140.1 384862420 12331091 1929599..1930156 1 NC_017341.1 membrane protein 1930156 12331091 SAA6008_01797 Staphylococcus aureus subsp. aureus str. JKD6008 membrane protein YP_005745140.1 1929599 D 546342 CDS YP_005745141.1 384862421 12331092 1930361..1931323 1 NC_017341.1 peptidylprolyl isomerase, PrsA 1931323 prsA 12331092 prsA Staphylococcus aureus subsp. aureus str. JKD6008 peptidylprolyl isomerase, PrsA YP_005745141.1 1930361 D 546342 CDS YP_005745142.1 384862422 12331093 complement(1931444..1932385) 1 NC_017341.1 3'-5' exoribonuclease YhaM 1932385 yhaM 12331093 yhaM Staphylococcus aureus subsp. aureus str. JKD6008 3'-5' exoribonuclease YhaM YP_005745142.1 1931444 R 546342 CDS YP_005745143.1 384862423 12331094 complement(1932382..1935318) 1 NC_017341.1 large conserved outer membrane protein 1935318 12331094 SAA6008_01800 Staphylococcus aureus subsp. aureus str. JKD6008 large conserved outer membrane protein YP_005745143.1 1932382 R 546342 CDS YP_005745144.1 384862424 12331095 complement(1935308..1936504) 1 NC_017341.1 calcineurin-like phosphoesterase 1936504 12331095 SAA6008_01801 Staphylococcus aureus subsp. aureus str. JKD6008 calcineurin-like phosphoesterase YP_005745144.1 1935308 R 546342 CDS YP_005745145.1 384862425 12331096 complement(1937276..1937620) 1 NC_017341.1 conserved cytoplasmic protein 1937620 12331096 SAA6008_01802 Staphylococcus aureus subsp. aureus str. JKD6008 conserved cytoplasmic protein YP_005745145.1 1937276 R 546342 CDS YP_005745146.1 384862426 12331097 complement(1937689..1938813) 1 NC_017341.1 hypothetical protein 1938813 12331097 SAA6008_01803 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745146.1 1937689 R 546342 CDS YP_005745147.1 384862427 12331098 complement(1938992..1939456) 1 NC_017341.1 transcriptional regulator 1939456 12331098 SAA6008_01804 Staphylococcus aureus subsp. aureus str. JKD6008 transcriptional regulator YP_005745147.1 1938992 R 546342 CDS YP_005745148.1 384862428 12331099 complement(1939812..1940435) 1 NC_017341.1 two-component response regulator receiver protein 1940435 yhcR 12331099 yhcR Staphylococcus aureus subsp. aureus str. JKD6008 two-component response regulator receiver protein YP_005745148.1 1939812 R 546342 CDS YP_005745149.1 384862429 12331100 complement(1940457..1941569) 1 NC_017341.1 two-component response regulator sensor protein, histidine kinase 1941569 yhcS 12331100 yhcS Staphylococcus aureus subsp. aureus str. JKD6008 two-component response regulator sensor protein, histidine kinase YP_005745149.1 1940457 R 546342 CDS YP_005745150.1 384862430 12331101 1941732..1942553 1 NC_017341.1 RluA, Pseudouridylate synthase, 23S RNA-specific 1942553 rluA 12331101 rluA Staphylococcus aureus subsp. aureus str. JKD6008 RluA, Pseudouridylate synthase, 23S RNA-specific YP_005745150.1 1941732 D 546342 CDS YP_005745151.1 384862431 12331102 complement(1943016..1944401) 1 NC_017341.1 fumarate hydratase 1944401 fumC 12331102 fumC Staphylococcus aureus subsp. aureus str. JKD6008 fumarate hydratase YP_005745151.1 1943016 R 546342 CDS YP_005745152.1 384862432 12331103 complement(1944597..1944992) 1 NC_017341.1 hypothetical protein 1944992 12331103 SAA6008_01809 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745152.1 1944597 R 546342 CDS YP_005745153.1 384862433 12331104 complement(1945769..1945921) 1 NC_017341.1 hypothetical protein 1945921 12331104 SAA6008_01810 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745153.1 1945769 R 546342 CDS YP_005745154.1 384862434 12331105 complement(1945946..1946545) 1 NC_017341.1 KEGG: sao:SAOUHSC_01987 hypothetical protein; glucosamine-6-phosphate deaminase 1946545 12331105 SAA6008_01811 Staphylococcus aureus subsp. aureus str. JKD6008 glucosamine-6-phosphate deaminase YP_005745154.1 1945946 R 546342 CDS YP_005745155.1 384862435 12331106 complement(1946704..1947174) 1 NC_017341.1 TrmH family RNA methyltransferase 1947174 12331106 SAA6008_01812 Staphylococcus aureus subsp. aureus str. JKD6008 TrmH family RNA methyltransferase YP_005745155.1 1946704 R 546342 CDS YP_005745156.1 384862436 12331107 complement(1947179..1948306) 1 NC_017341.1 TIGRFAM: putative iron-sulfur cluster binding protein PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; domain of unknown function DUF1730 KEGG: sar:SAR1947 putative iron-sulphur protein; phenylalanyl-tRNA synthetase subunit alpha 1948306 12331107 SAA6008_01813 Staphylococcus aureus subsp. aureus str. JKD6008 phenylalanyl-tRNA synthetase subunit alpha YP_005745156.1 1947179 R 546342 CDS YP_005745157.1 384862437 12331108 complement(1948457..1949185) 1 NC_017341.1 glutamate ABC superfamily ATP binding cassette transporter, ABC protein 1949185 glnQ 12331108 glnQ Staphylococcus aureus subsp. aureus str. JKD6008 glutamate ABC superfamily ATP binding cassette transporter, ABC protein YP_005745157.1 1948457 R 546342 CDS YP_005745158.1 384862438 12331109 complement(1949172..1950629) 1 NC_017341.1 polar amino acid ABC transporter inner membrane subunit 1950629 12331109 SAA6008_01815 Staphylococcus aureus subsp. aureus str. JKD6008 polar amino acid ABC transporter inner membrane subunit YP_005745158.1 1949172 R 546342 CDS YP_005745159.1 384862439 12331110 complement(1950887..1951948) 1 NC_017341.1 PFAM: phosphotransferase system EIIC KEGG: sao:SAOUHSC_01992 phosphotransferase system, EIIC domain protein; toxin regulatory protein 1951948 12331110 SAA6008_01816 Staphylococcus aureus subsp. aureus str. JKD6008 toxin regulatory protein YP_005745159.1 1950887 R 546342 CDS YP_005745160.1 384862440 12331111 1952441..1953802 1 NC_017341.1 IS1181 transposase 1953802 12331111 SAA6008_01817 Staphylococcus aureus subsp. aureus str. JKD6008 IS1181 transposase YP_005745160.1 1952441 D 546342 CDS YP_005745161.1 384862441 12331143 complement(1962217..1962663) 1 NC_017341.1 transcriptional regulator Fur family protein 1962663 perR 12331143 perR Staphylococcus aureus subsp. aureus str. JKD6008 transcriptional regulator Fur family protein YP_005745161.1 1962217 R 546342 CDS YP_005745162.1 384862442 12331144 complement(1962760..1963710) 1 NC_017341.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein 1963710 12331144 SAA6008_01819 Staphylococcus aureus subsp. aureus str. JKD6008 D-isomer specific 2-hydroxyacid dehydrogenase family protein YP_005745162.1 1962760 R 546342 CDS YP_005745163.1 384862443 12331145 complement(1963716..1964171) 1 NC_017341.1 alkyl hydroperoxide reductase 1964171 bcp 12331145 bcp Staphylococcus aureus subsp. aureus str. JKD6008 alkyl hydroperoxide reductase YP_005745163.1 1963716 R 546342 CDS YP_005745164.1 384862444 12331146 1964252..1965541 1 NC_017341.1 putative glutamate-1-semialdehyde 2,1-aminomutase 1965541 gsaB 12331146 gsaB Staphylococcus aureus subsp. aureus str. JKD6008 putative glutamate-1-semialdehyde 2,1-aminomutase YP_005745164.1 1964252 D 546342 CDS YP_005745165.1 384862445 12331147 1965834..1966928 1 NC_017341.1 PFAM: protein of unknown function DUF939 KEGG: sab:SAB1798 probable membrane protein; hypothetical protein 1966928 12331147 SAA6008_01822 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745165.1 1965834 D 546342 CDS YP_005745166.1 384862446 12331148 complement(1967119..1968855) 1 NC_017341.1 Lipid A export ATP-binding/permease MsbA 1968855 msbA 12331148 msbA Staphylococcus aureus subsp. aureus str. JKD6008 Lipid A export ATP-binding/permease MsbA YP_005745166.1 1967119 R 546342 CDS YP_005745167.1 384862447 12331149 complement(1969146..1969688) 1 NC_017341.1 hypothetical protein 1969688 12331149 SAA6008_01824 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745167.1 1969146 R 546342 CDS YP_005745168.1 384862448 12331150 complement(1969990..1971027) 1 NC_017341.1 A/G-specific adenine glycosylase 1971027 mutY 12331150 mutY Staphylococcus aureus subsp. aureus str. JKD6008 A/G-specific adenine glycosylase YP_005745168.1 1969990 R 546342 CDS YP_005745169.1 384862449 12331151 1971179..1972156 1 NC_017341.1 PFAM: membrane-bound metal-dependent hydrolase KEGG: sao:SAOUHSC_02006 hypothetical protein; hypothetical protein 1972156 12331151 SAA6008_01826 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745169.1 1971179 D 546342 CDS YP_005745170.1 384862450 12331152 complement(1972417..1973253) 1 NC_017341.1 teichoic acid ABC superfamily ATP binding cassette transporter, membrane protein 1973253 12331152 SAA6008_01827 Staphylococcus aureus subsp. aureus str. JKD6008 teichoic acid ABC superfamily ATP binding cassette transporter, membrane protein YP_005745170.1 1972417 R 546342 CDS YP_005745171.1 384862451 12331153 complement(1973262..1974779) 1 NC_017341.1 ABC-type polysaccharide/polyol phosphate transport system ATPase component-like protein 1974779 12331153 SAA6008_01828 Staphylococcus aureus subsp. aureus str. JKD6008 ABC-type polysaccharide/polyol phosphate transport system ATPase component-like protein YP_005745171.1 1973262 R 546342 CDS YP_005745172.1 384862452 12331154 complement(1974794..1975108) 1 NC_017341.1 hypothetical protein 1975108 12331154 SAA6008_01829 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745172.1 1974794 R 546342 CDS YP_005745173.1 384862453 12331155 complement(1975086..1975826) 1 NC_017341.1 recombination regulator RecX 1975826 recX 12331155 recX Staphylococcus aureus subsp. aureus str. JKD6008 recombination regulator RecX YP_005745173.1 1975086 R 546342 CDS YP_005745174.1 384862454 12331156 complement(1976165..1976974) 1 NC_017341.1 monofunctional glycosyltransferase 1976974 sgtB 12331156 sgtB Staphylococcus aureus subsp. aureus str. JKD6008 monofunctional glycosyltransferase YP_005745174.1 1976165 R 546342 CDS YP_005745175.1 384862455 12331157 complement(1977315..1977830) 1 NC_017341.1 intracellular protease 1977830 pfpI 12331157 pfpI Staphylococcus aureus subsp. aureus str. JKD6008 intracellular protease YP_005745175.1 1977315 R 546342 CDS YP_005745176.1 384862456 12331158 complement(1977961..1978122) 1 NC_017341.1 hypothetical protein 1978122 12331158 SAA6008_01833 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745176.1 1977961 R 546342 CDS YP_005745177.1 384862457 12331159 complement(1979136..1980581) 1 NC_017341.1 phage amidase 1980581 12331159 SAA6008_01834 Staphylococcus aureus subsp. aureus str. JKD6008 phage amidase YP_005745177.1 1979136 R 546342 CDS YP_005745178.1 384862458 12331160 complement(1980562..1980999) 1 NC_017341.1 phage holin 1980999 12331160 SAA6008_01835 Staphylococcus aureus subsp. aureus str. JKD6008 phage holin YP_005745178.1 1980562 R 546342 CDS YP_005745179.1 384862459 12331161 complement(1981055..1981450) 1 NC_017341.1 phage protein 1981450 12331161 SAA6008_01836 Staphylococcus aureus subsp. aureus str. JKD6008 phage protein YP_005745179.1 1981055 R 546342 CDS YP_005745180.1 384862460 12331162 complement(1981456..1982628) 1 NC_017341.1 phage tail fiber protein 1982628 12331162 SAA6008_01837 Staphylococcus aureus subsp. aureus str. JKD6008 phage tail fiber protein YP_005745180.1 1981456 R 546342 CDS YP_005745181.1 384862461 12331163 complement(1982641..1984515) 1 NC_017341.1 phage N-acetylglucosaminidase 1984515 12331163 SAA6008_01838 Staphylococcus aureus subsp. aureus str. JKD6008 phage N-acetylglucosaminidase YP_005745181.1 1982641 R 546342 CDS YP_005745182.1 384862462 12331164 complement(1984652..1984951) 1 NC_017341.1 hypothetical protein 1984951 12331164 SAA6008_01839 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745182.1 1984652 R 546342 CDS YP_005745183.1 384862463 12331165 complement(1984992..1985168) 1 NC_017341.1 phage protein 1985168 12331165 SAA6008_01840 Staphylococcus aureus subsp. aureus str. JKD6008 phage protein YP_005745183.1 1984992 R 546342 CDS YP_005745184.1 384862464 12331166 complement(1985169..1985546) 1 NC_017341.1 hypothetical protein 1985546 12331166 SAA6008_01841 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745184.1 1985169 R 546342 CDS YP_005745185.1 384862465 12331167 complement(1985546..1987369) 1 NC_017341.1 phage protein 1987369 12331167 SAA6008_01842 Staphylococcus aureus subsp. aureus str. JKD6008 phage protein YP_005745185.1 1985546 R 546342 CDS YP_005745186.1 384862466 12331168 complement(1987369..1989267) 1 NC_017341.1 phage protein 1989267 12331168 SAA6008_01843 Staphylococcus aureus subsp. aureus str. JKD6008 phage protein YP_005745186.1 1987369 R 546342 CDS YP_005745187.1 384862467 12331169 complement(1989280..1991166) 1 NC_017341.1 putative phage minor structural protein 1991166 12331169 SAA6008_01844 Staphylococcus aureus subsp. aureus str. JKD6008 putative phage minor structural protein YP_005745187.1 1989280 R 546342 CDS YP_005745188.1 384862468 12331170 complement(1991177..1992112) 1 NC_017341.1 phage tail protein 1992112 12331170 SAA6008_01845 Staphylococcus aureus subsp. aureus str. JKD6008 phage tail protein YP_005745188.1 1991177 R 546342 CDS YP_005745189.1 384862469 12331171 complement(1992127..1995096) 1 NC_017341.1 phage tape measure protein 1995096 12331171 SAA6008_01846 Staphylococcus aureus subsp. aureus str. JKD6008 phage tape measure protein YP_005745189.1 1992127 R 546342 CDS YP_005745190.1 384862470 12331172 complement(1995099..1995416) 1 NC_017341.1 hypothetical protein 1995416 12331172 SAA6008_01847 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745190.1 1995099 R 546342 CDS YP_005745191.1 384862471 12331173 complement(1995461..1995955) 1 NC_017341.1 hypothetical protein 1995955 12331173 SAA6008_01848 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745191.1 1995461 R 546342 CDS YP_005745192.1 384862472 12331174 complement(1996017..1996577) 1 NC_017341.1 phage protein 1996577 12331174 SAA6008_01849 Staphylococcus aureus subsp. aureus str. JKD6008 phage protein YP_005745192.1 1996017 R 546342 CDS YP_005745193.1 384862473 12331175 complement(1996564..1997001) 1 NC_017341.1 phage protein 1997001 12331175 SAA6008_01850 Staphylococcus aureus subsp. aureus str. JKD6008 phage protein YP_005745193.1 1996564 R 546342 CDS YP_005745194.1 384862474 12331176 complement(1997014..1997427) 1 NC_017341.1 phage protein 1997427 12331176 SAA6008_01851 Staphylococcus aureus subsp. aureus str. JKD6008 phage protein YP_005745194.1 1997014 R 546342 CDS YP_005745195.1 384862475 12331177 complement(1997414..1997749) 1 NC_017341.1 putative phage head-tail adaptor 1997749 12331177 SAA6008_01852 Staphylococcus aureus subsp. aureus str. JKD6008 putative phage head-tail adaptor YP_005745195.1 1997414 R 546342 CDS YP_005745196.1 384862476 12331178 complement(1997742..1998056) 1 NC_017341.1 putative phage DNA-packaging protein 1998056 12331178 SAA6008_01853 Staphylococcus aureus subsp. aureus str. JKD6008 putative phage DNA-packaging protein YP_005745196.1 1997742 R 546342 CDS YP_005745197.1 384862477 12331179 complement(1998056..1998382) 1 NC_017341.1 Rho termination factor domain-containing protein 1998382 12331179 SAA6008_01854 Staphylococcus aureus subsp. aureus str. JKD6008 Rho termination factor domain-containing protein YP_005745197.1 1998056 R 546342 CDS YP_005745198.1 384862478 12331180 complement(1998399..1999223) 1 NC_017341.1 putative major capsid protein 1999223 12331180 SAA6008_01855 Staphylococcus aureus subsp. aureus str. JKD6008 putative major capsid protein YP_005745198.1 1998399 R 546342 CDS YP_005745199.1 384862479 12331181 complement(1999244..1999840) 1 NC_017341.1 phage minor structural GP20 1999840 12331181 SAA6008_01856 Staphylococcus aureus subsp. aureus str. JKD6008 phage minor structural GP20 YP_005745199.1 1999244 R 546342 CDS YP_005745200.1 384862480 12331182 complement(1999938..2000900) 1 NC_017341.1 phage minor head protein 2000900 12331182 SAA6008_01857 Staphylococcus aureus subsp. aureus str. JKD6008 phage minor head protein YP_005745200.1 1999938 R 546342 CDS YP_005745201.1 384862481 12331183 complement(2000857..2002275) 1 NC_017341.1 phage portal protein, SPP1 family 2002275 12331183 SAA6008_01858 Staphylococcus aureus subsp. aureus str. JKD6008 phage portal protein, SPP1 family YP_005745201.1 2000857 R 546342 CDS YP_005745202.1 384862482 12331184 complement(2002289..2003497) 1 NC_017341.1 phage terminase, large subunit 2003497 12331184 SAA6008_01859 Staphylococcus aureus subsp. aureus str. JKD6008 phage terminase, large subunit YP_005745202.1 2002289 R 546342 CDS YP_005745203.1 384862483 12331185 complement(2003490..2003984) 1 NC_017341.1 phage terminase small subunit 2003984 12331185 SAA6008_01860 Staphylococcus aureus subsp. aureus str. JKD6008 phage terminase small subunit YP_005745203.1 2003490 R 546342 CDS YP_005745204.1 384862484 12331186 complement(2004339..2004713) 1 NC_017341.1 phage protein 2004713 12331186 SAA6008_01861 Staphylococcus aureus subsp. aureus str. JKD6008 phage protein YP_005745204.1 2004339 R 546342 CDS YP_005745205.1 384862485 12331187 complement(2004741..2004914) 1 NC_017341.1 PFAM: transcriptional activator RinB KEGG: sao:SAOUHSC_02053 transcriptional activator RinB-related protein; transcriptional activator 2004914 12331187 SAA6008_01862 Staphylococcus aureus subsp. aureus str. JKD6008 transcriptional activator YP_005745205.1 2004741 R 546342 CDS YP_005745206.1 384862486 12331188 complement(2004911..2005117) 1 NC_017341.1 hypothetical protein 2005117 12331188 SAA6008_01863 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745206.1 2004911 R 546342 CDS YP_005745207.1 384862487 12331189 complement(2005114..2005350) 1 NC_017341.1 phage protein 2005350 12331189 SAA6008_01864 Staphylococcus aureus subsp. aureus str. JKD6008 phage protein YP_005745207.1 2005114 R 546342 CDS YP_005745208.1 384862488 12331190 complement(2005396..2005932) 1 NC_017341.1 dUTPase 2005932 12331190 SAA6008_01865 Staphylococcus aureus subsp. aureus str. JKD6008 dUTPase YP_005745208.1 2005396 R 546342 CDS YP_005745209.1 384862489 12331191 complement(2005937..2006173) 1 NC_017341.1 hypothetical protein 2006173 12331191 SAA6008_01866 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745209.1 2005937 R 546342 CDS YP_005745210.1 384862490 12331192 complement(2006166..2006450) 1 NC_017341.1 similar to ORF31 of bacteriophage phi ETA [Bacteriophage phiNM1]; hypothetical protein 2006450 12331192 SAA6008_01867 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745210.1 2006166 R 546342 CDS YP_005745211.1 384862491 12331193 complement(2006447..2006848) 1 NC_017341.1 phage protein 2006848 12331193 SAA6008_01868 Staphylococcus aureus subsp. aureus str. JKD6008 phage protein YP_005745211.1 2006447 R 546342 CDS YP_005745212.1 384862492 12331194 complement(2006861..2007103) 1 NC_017341.1 phage protein 2007103 12331194 SAA6008_01869 Staphylococcus aureus subsp. aureus str. JKD6008 phage protein YP_005745212.1 2006861 R 546342 CDS YP_005745213.1 384862493 12331195 complement(2007107..2007394) 1 NC_017341.1 potential pseudogene, truncated compared to orthologs; putative phage leukocidin protein 2007394 12331195 SAA6008_01870 Staphylococcus aureus subsp. aureus str. JKD6008 putative phage leukocidin protein YP_005745213.1 2007107 R 546342 CDS YP_005745214.1 384862494 12331196 complement(2007391..2007678) 1 NC_017341.1 hypothetical protein 2007678 12331196 SAA6008_01871 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745214.1 2007391 R 546342 CDS YP_005745215.1 384862495 12331197 complement(2007721..2007906) 1 NC_017341.1 hypothetical protein 2007906 12331197 SAA6008_01872 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745215.1 2007721 R 546342 CDS YP_005745216.1 384862496 12331198 complement(2007911..2008315) 1 NC_017341.1 phage protein 2008315 12331198 SAA6008_01873 Staphylococcus aureus subsp. aureus str. JKD6008 phage protein YP_005745216.1 2007911 R 546342 CDS YP_005745217.1 384862497 12331199 complement(2008325..2008546) 1 NC_017341.1 phage protein 2008546 12331199 SAA6008_01874 Staphylococcus aureus subsp. aureus str. JKD6008 phage protein YP_005745217.1 2008325 R 546342 CDS YP_005745218.1 384862498 12331200 complement(2008550..2008729) 1 NC_017341.1 hypothetical protein 2008729 12331200 SAA6008_01875 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745218.1 2008550 R 546342 CDS YP_005745219.1 384862499 12331201 complement(2008762..2010003) 1 NC_017341.1 identified by similarity to EGAD:21924; match to protein family HMM PF03796; Replicative DnaB-like helicase family protein 2010003 12331201 SAA6008_01876 Staphylococcus aureus subsp. aureus str. JKD6008 Replicative DnaB-like helicase family protein YP_005745219.1 2008762 R 546342 CDS YP_005745220.1 384862500 12331202 complement(2010000..2010356) 1 NC_017341.1 hypothetical protein 2010356 12331202 SAA6008_01877 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745220.1 2010000 R 546342 CDS YP_005745221.1 384862501 12331203 complement(2010356..2011111) 1 NC_017341.1 hypothetical phage-related protein 2011111 12331203 SAA6008_01878 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical phage-related protein YP_005745221.1 2010356 R 546342 CDS YP_005745222.1 384862502 12331204 complement(2011104..2011778) 1 NC_017341.1 phage protein 2011778 12331204 SAA6008_01879 Staphylococcus aureus subsp. aureus str. JKD6008 phage protein YP_005745222.1 2011104 R 546342 CDS YP_005745223.1 384862503 12331205 complement(2011792..2012220) 1 NC_017341.1 ssDNA-binding protein 2012220 12331205 SAA6008_01880 Staphylococcus aureus subsp. aureus str. JKD6008 ssDNA-binding protein YP_005745223.1 2011792 R 546342 CDS YP_005745224.1 384862504 12331206 complement(2012220..2012873) 1 NC_017341.1 DNA single-strand annealing protein; putative ERF superfamily phage protein 2012873 12331206 SAA6008_01881 Staphylococcus aureus subsp. aureus str. JKD6008 putative ERF superfamily phage protein YP_005745224.1 2012220 R 546342 CDS YP_005745225.1 384862505 12331207 complement(2012874..2013410) 1 NC_017341.1 bacteriophage Mu Gam-like protein 2013410 12331207 SAA6008_01882 Staphylococcus aureus subsp. aureus str. JKD6008 bacteriophage Mu Gam-like protein YP_005745225.1 2012874 R 546342 CDS YP_005745226.1 384862506 12331208 complement(2013423..2013683) 1 NC_017341.1 phage protein 2013683 12331208 SAA6008_01883 Staphylococcus aureus subsp. aureus str. JKD6008 phage protein YP_005745226.1 2013423 R 546342 CDS YP_005745227.1 384862507 12331209 complement(2013780..2013941) 1 NC_017341.1 hypothetical protein 2013941 12331209 SAA6008_01884 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745227.1 2013780 R 546342 CDS YP_005745228.1 384862508 12331210 complement(2013934..2014155) 1 NC_017341.1 phage protein 2014155 12331210 SAA6008_01885 Staphylococcus aureus subsp. aureus str. JKD6008 phage protein YP_005745228.1 2013934 R 546342 CDS YP_005745229.1 384862509 12331211 2014227..2014892 1 NC_017341.1 hypothetical phage-related protein 2014892 12331211 SAA6008_01886 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical phage-related protein YP_005745229.1 2014227 D 546342 CDS YP_005745230.1 384862510 12331212 complement(2015006..2015746) 1 NC_017341.1 phage antirepressor protein 2015746 12331212 SAA6008_01887 Staphylococcus aureus subsp. aureus str. JKD6008 phage antirepressor protein YP_005745230.1 2015006 R 546342 CDS YP_005745231.1 384862511 12331213 2015806..2016288 1 NC_017341.1 hypothetical protein 2016288 12331213 SAA6008_01888 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745231.1 2015806 D 546342 CDS YP_005745232.1 384862512 12331214 complement(2016389..2016568) 1 NC_017341.1 phage protein 2016568 12331214 SAA6008_01889 Staphylococcus aureus subsp. aureus str. JKD6008 phage protein YP_005745232.1 2016389 R 546342 CDS YP_005745233.1 384862513 12331215 complement(2016584..2017348) 1 NC_017341.1 prophage antirepressor 2017348 12331215 SAA6008_01890 Staphylococcus aureus subsp. aureus str. JKD6008 prophage antirepressor YP_005745233.1 2016584 R 546342 CDS YP_005745234.1 384862514 12331216 complement(2017348..2017542) 1 NC_017341.1 helix-turn-helix domain-containing protein 2017542 12331216 SAA6008_01891 Staphylococcus aureus subsp. aureus str. JKD6008 helix-turn-helix domain-containing protein YP_005745234.1 2017348 R 546342 CDS YP_005745235.1 384862515 12331217 2017850..2018137 1 NC_017341.1 XRE family transcriptional regulator 2018137 12331217 SAA6008_01892 Staphylococcus aureus subsp. aureus str. JKD6008 XRE family transcriptional regulator YP_005745235.1 2017850 D 546342 CDS YP_005745236.1 384862516 12331218 2018154..2018828 1 NC_017341.1 hypothetical protein 2018828 12331218 SAA6008_01893 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745236.1 2018154 D 546342 CDS YP_005745237.1 384862517 12331219 2018856..2019581 1 NC_017341.1 hypothetical protein 2019581 12331219 SAA6008_01894 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745237.1 2018856 D 546342 CDS YP_005745238.1 384862518 12331220 2019613..2020317 1 NC_017341.1 phage protein 2020317 12331220 SAA6008_01895 Staphylococcus aureus subsp. aureus str. JKD6008 phage protein YP_005745238.1 2019613 D 546342 CDS YP_005745239.1 384862519 12331221 2020514..2021560 1 NC_017341.1 phage integrase 2021560 12331221 SAA6008_01896 Staphylococcus aureus subsp. aureus str. JKD6008 phage integrase YP_005745239.1 2020514 D 546342 CDS YP_005745240.1 384862520 12331222 2021605..2022750 1 NC_017341.1 PFAM: Radical SAM domain protein; YfkB-like domain protein KEGG: sav:SAV1877 similar to thioredoxin-like oxidoreductase; putative Fe-S oxidoreductase 2022750 12331222 SAA6008_01897 Staphylococcus aureus subsp. aureus str. JKD6008 putative Fe-S oxidoreductase YP_005745240.1 2021605 D 546342 CDS YP_005745241.1 384862521 12331223 complement(2023010..2023540) 1 NC_017341.1 acyl-CoA thioester hydrolase 2023540 12331223 SAA6008_01898 Staphylococcus aureus subsp. aureus str. JKD6008 acyl-CoA thioester hydrolase YP_005745241.1 2023010 R 546342 CDS YP_005745242.1 384862522 12331224 complement(2023630..2024886) 1 NC_017341.1 peptidase M29, aminopeptidase II 2024886 ampS 12331224 ampS Staphylococcus aureus subsp. aureus str. JKD6008 peptidase M29, aminopeptidase II YP_005745242.1 2023630 R 546342 CDS YP_005745243.1 384862523 12331225 complement(2024889..2025089) 1 NC_017341.1 hypothetical protein 2025089 12331225 SAA6008_01900 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745243.1 2024889 R 546342 CDS YP_005745244.1 384862524 12331226 2025236..2025700 1 NC_017341.1 PFAM: low molecular weight phosphotyrosine protein phosphatase, identified by match to protein family HMM PF01451; phosphotyrosine protein phosphatase 2025700 12331226 SAA6008_01901 Staphylococcus aureus subsp. aureus str. JKD6008 phosphotyrosine protein phosphatase YP_005745244.1 2025236 D 546342 CDS YP_005745245.1 384862525 12331227 2025707..2025982 1 NC_017341.1 hypothetical protein 2025982 12331227 SAA6008_01902 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745245.1 2025707 D 546342 CDS YP_005745246.1 384862526 12331228 2026260..2027477 1 NC_017341.1 hypothetical protein 2027477 12331228 SAA6008_01903 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745246.1 2026260 D 546342 CDS YP_005745247.1 384862527 12331229 complement(2027593..2028222) 1 NC_017341.1 LuxR family two component transcriptional regulator 2028222 vraR 12331229 vraR Staphylococcus aureus subsp. aureus str. JKD6008 LuxR family two component transcriptional regulator YP_005745247.1 2027593 R 546342 CDS YP_005745248.1 384862528 12331230 complement(2028212..2029255) 1 NC_017341.1 integral membrane sensor signal transduction histidine kinase 2029255 vraS 12331230 vraS Staphylococcus aureus subsp. aureus str. JKD6008 integral membrane sensor signal transduction histidine kinase YP_005745248.1 2028212 R 546342 CDS YP_005745249.1 384862529 12331231 complement(2029252..2029782) 1 NC_017341.1 hypothetical protein 2029782 12331231 SAA6008_01906 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745249.1 2029252 R 546342 CDS YP_005745250.1 384862530 12331232 complement(2029968..2030354) 1 NC_017341.1 hypothetical protein 2030354 12331232 SAA6008_01907 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745250.1 2029968 R 546342 CDS YP_005745251.1 384862531 12331233 complement(2030571..2031329) 1 NC_017341.1 Identified by match to protein family HMM PF00557; match to protein family HMM TIGR00500. Catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; M24 family methionyl aminopeptidase 2031329 12331233 SAA6008_01908 Staphylococcus aureus subsp. aureus str. JKD6008 M24 family methionyl aminopeptidase YP_005745251.1 2030571 R 546342 CDS YP_005745252.1 384862532 12331234 2031916..2032902 1 NC_017341.1 hypothetical protein 2032902 12331234 SAA6008_01909 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745252.1 2031916 D 546342 CDS YP_005745253.1 384862533 12331235 complement(2033333..2033794) 1 NC_017341.1 hypothetical protein 2033794 12331235 SAA6008_01910 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745253.1 2033333 R 546342 CDS YP_005745254.1 384862534 12331236 complement(2033971..2034702) 1 NC_017341.1 adenosylcobyric acid synthase 2034702 12331236 SAA6008_01911 Staphylococcus aureus subsp. aureus str. JKD6008 adenosylcobyric acid synthase YP_005745254.1 2033971 R 546342 CDS YP_005745255.1 384862535 12331237 complement(2034704..2036017) 1 NC_017341.1 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 2036017 murE2 12331237 murE2 Staphylococcus aureus subsp. aureus str. JKD6008 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_005745255.1 2034704 R 546342 CDS YP_005745256.1 384862536 12331238 2036309..2036809 1 NC_017341.1 ferritin 2036809 ftn 12331238 ftn Staphylococcus aureus subsp. aureus str. JKD6008 ferritin YP_005745256.1 2036309 D 546342 CDS YP_005745257.1 384862537 12331239 2037198..2037752 1 NC_017341.1 Exonuclease, RNase T and DNA polymerase III 2037752 12331239 SAA6008_01914 Staphylococcus aureus subsp. aureus str. JKD6008 Exonuclease, RNase T and DNA polymerase III YP_005745257.1 2037198 D 546342 CDS YP_005745258.1 384862538 12331240 complement(2037820..2038860) 1 NC_017341.1 DNA-directed DNA polymerase IV 2038860 dinP 12331240 dinP Staphylococcus aureus subsp. aureus str. JKD6008 DNA-directed DNA polymerase IV YP_005745258.1 2037820 R 546342 CDS YP_005745259.1 384862539 12331241 complement(2039137..2039667) 1 NC_017341.1 hypothetical protein 2039667 12331241 SAA6008_01916 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745259.1 2039137 R 546342 CDS YP_005745260.1 384862540 12331242 complement(2039837..2041198) 1 NC_017341.1 putative RNA methyltransferase 2041198 12331242 SAA6008_01917 Staphylococcus aureus subsp. aureus str. JKD6008 putative RNA methyltransferase YP_005745260.1 2039837 R 546342 CDS YP_005745261.1 384862541 12331243 complement(2041279..2042226) 1 NC_017341.1 putative lipid kinase 2042226 12331243 SAA6008_01918 Staphylococcus aureus subsp. aureus str. JKD6008 putative lipid kinase YP_005745261.1 2041279 R 546342 CDS YP_005745262.1 384862542 12331244 complement(2042751..2042897) 1 NC_017341.1 hypothetical protein 2042897 12331244 SAA6008_01919 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745262.1 2042751 R 546342 CDS YP_005745263.1 384862543 12331245 complement(2042937..2044304) 1 NC_017341.1 Aspartyl/glutamyl-tRNA amidotransferase subunit B 2044304 gatB 12331245 gatB Staphylococcus aureus subsp. aureus str. JKD6008 Aspartyl/glutamyl-tRNA amidotransferase subunit B YP_005745263.1 2042937 R 546342 CDS YP_005745264.1 384862544 12331246 complement(2044377..2045834) 1 NC_017341.1 Aspartyl/glutamyl-tRNA amidotransferase subunit A 2045834 gatA 12331246 gatA Staphylococcus aureus subsp. aureus str. JKD6008 Aspartyl/glutamyl-tRNA amidotransferase subunit A YP_005745264.1 2044377 R 546342 CDS YP_005745265.1 384862545 12331247 complement(2045836..2046138) 1 NC_017341.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes plac; bifunctional aspartyl/glutamyl-tRNA amidotransferase subunit C 2046138 gatC 12331247 gatC Staphylococcus aureus subsp. aureus str. JKD6008 bifunctional aspartyl/glutamyl-tRNA amidotransferase subunit C YP_005745265.1 2045836 R 546342 CDS YP_005745266.1 384862546 12331248 2046505..2048043 1 NC_017341.1 SSS family solute:sodium (Na+)/proline symporter 2048043 putP 12331248 putP Staphylococcus aureus subsp. aureus str. JKD6008 SSS family solute:sodium (Na+)/proline symporter YP_005745266.1 2046505 D 546342 CDS YP_005745267.1 384862547 12331249 complement(2048132..2049331) 1 NC_017341.1 PFAM: CamS sex pheromone cAM373 family protein KEGG: sav:SAV1903 sex pheromone staph-cAM373 precursor; pheromone lipoprotein CamS 2049331 camS 12331249 camS Staphylococcus aureus subsp. aureus str. JKD6008 pheromone lipoprotein CamS YP_005745267.1 2048132 R 546342 CDS YP_005745268.1 384862548 12331250 complement(2049344..2051347) 1 NC_017341.1 DNA ligase (polydeoxyribonucleotide syntase) 2051347 lig 12331250 lig Staphylococcus aureus subsp. aureus str. JKD6008 DNA ligase (polydeoxyribonucleotide syntase) YP_005745268.1 2049344 R 546342 CDS YP_005745269.1 384862549 12331251 complement(2051351..2053543) 1 NC_017341.1 ATP-dependent DNA helicase, PcrA 2053543 pcrA 12331251 pcrA Staphylococcus aureus subsp. aureus str. JKD6008 ATP-dependent DNA helicase, PcrA YP_005745269.1 2051351 R 546342 CDS YP_005745270.1 384862550 12331252 complement(2053540..2054232) 1 NC_017341.1 putative glycerol-1-phosphate prenyltransferase 2054232 pcrB 12331252 pcrB Staphylococcus aureus subsp. aureus str. JKD6008 putative glycerol-1-phosphate prenyltransferase YP_005745270.1 2053540 R 546342 CDS YP_005745271.1 384862551 12331253 complement(2054404..2054706) 1 NC_017341.1 this protein binds to tryptophan and represses transcription of the Trp operon; Trp repressor protein 2054706 12331253 SAA6008_01928 Staphylococcus aureus subsp. aureus str. JKD6008 Trp repressor protein YP_005745271.1 2054404 R 546342 CDS YP_005745272.1 384862552 12331254 complement(2054815..2056110) 1 NC_017341.1 adenylosuccinate lyase 2056110 purB 12331254 purB Staphylococcus aureus subsp. aureus str. JKD6008 adenylosuccinate lyase YP_005745272.1 2054815 R 546342 CDS YP_005745273.1 384862553 12331255 2056971..2058137 1 NC_017341.1 cysteine protease precursor SspB 2058137 sspB2 12331255 sspB2 Staphylococcus aureus subsp. aureus str. JKD6008 cysteine protease precursor SspB YP_005745273.1 2056971 D 546342 CDS YP_005745274.1 384862554 12331256 complement(2058786..2058902) 1 NC_017341.1 hypothetical protein 2058902 12331256 SAA6008_01931 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745274.1 2058786 R 546342 CDS YP_005745275.1 384862555 12331257 complement(2058940..2059542) 1 NC_017341.1 hypothetical protein 2059542 12331257 SAA6008_01932 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745275.1 2058940 R 546342 CDS YP_005745276.1 384862556 12331258 complement(2059813..2060634) 1 NC_017341.1 NH(3)-dependent NAD+ synthetase 2060634 nadE 12331258 nadE Staphylococcus aureus subsp. aureus str. JKD6008 NH(3)-dependent NAD+ synthetase YP_005745276.1 2059813 R 546342 CDS YP_005745277.1 384862557 12331259 complement(2060627..2062096) 1 NC_017341.1 nicotinate phosphoribosyltransferase 2062096 nadC 12331259 nadC Staphylococcus aureus subsp. aureus str. JKD6008 nicotinate phosphoribosyltransferase YP_005745277.1 2060627 R 546342 CDS YP_005745278.1 384862558 12331260 2062280..2063356 1 NC_017341.1 nitric-oxide synthase, oxygenase subunit 2063356 12331260 SAA6008_01935 Staphylococcus aureus subsp. aureus str. JKD6008 nitric-oxide synthase, oxygenase subunit YP_005745278.1 2062280 D 546342 CDS YP_005745279.1 384862559 12331261 2063376..2064170 1 NC_017341.1 putative prephenate dehydratase 2064170 pheA 12331261 pheA Staphylococcus aureus subsp. aureus str. JKD6008 putative prephenate dehydratase YP_005745279.1 2063376 D 546342 CDS YP_005745280.1 384862560 12331262 complement(2064360..2065922) 1 NC_017341.1 DASS family divalent anion:sodium (Na+) symporter 2065922 12331262 SAA6008_01937 Staphylococcus aureus subsp. aureus str. JKD6008 DASS family divalent anion:sodium (Na+) symporter YP_005745280.1 2064360 R 546342 CDS YP_005745281.1 384862561 12331263 complement(2066127..2067212) 1 NC_017341.1 hypothetical protein 2067212 12331263 SAA6008_01938 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745281.1 2066127 R 546342 CDS YP_005745282.1 384862562 12331264 2067596..2068156 1 NC_017341.1 bifunctional pyrazinamidase/nicotinamidase 2068156 12331264 SAA6008_01939 Staphylococcus aureus subsp. aureus str. JKD6008 bifunctional pyrazinamidase/nicotinamidase YP_005745282.1 2067596 D 546342 CDS YP_005745283.1 384862563 12331265 2068209..2069138 1 NC_017341.1 putative manganese-dependent inorganic pyrophosphatase 2069138 ppaC 12331265 ppaC Staphylococcus aureus subsp. aureus str. JKD6008 putative manganese-dependent inorganic pyrophosphatase YP_005745283.1 2068209 D 546342 CDS YP_005745284.1 384862564 12331266 complement(2069333..2069461) 1 NC_017341.1 hypothetical protein 2069461 12331266 SAA6008_01941 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745284.1 2069333 R 546342 CDS YP_005745285.1 384862565 12331267 2069558..2070937 1 NC_017341.1 putative aldehyde dehydrogenase 2070937 aldH 12331267 aldH Staphylococcus aureus subsp. aureus str. JKD6008 putative aldehyde dehydrogenase YP_005745285.1 2069558 D 546342 CDS YP_005745286.1 384862566 12331268 complement(2071057..2072085) 1 NC_017341.1 3-carboxy-cis,cis-muconate lactonizing enzyme 2072085 12331268 SAA6008_01943 Staphylococcus aureus subsp. aureus str. JKD6008 3-carboxy-cis,cis-muconate lactonizing enzyme YP_005745286.1 2071057 R 546342 CDS YP_005745287.1 384862567 12331269 2072355..2072756 1 NC_017341.1 hypothetical protein 2072756 yolD 12331269 yolD Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745287.1 2072355 D 546342 CDS YP_005745288.1 384862568 12331270 complement(2073329..2073481) 1 NC_017341.1 hypothetical protein 2073481 12331270 SAA6008_01945 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745288.1 2073329 R 546342 CDS YP_005745289.1 384862569 12331271 2073953..2074993 1 NC_017341.1 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 2074993 12331271 SAA6008_01946 Staphylococcus aureus subsp. aureus str. JKD6008 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase YP_005745289.1 2073953 D 546342 CDS YP_005745290.1 384862570 12331272 complement(2075050..2075892) 1 NC_017341.1 hypothetical protein 2075892 12331272 SAA6008_01947 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745290.1 2075050 R 546342 CDS YP_005745291.1 384862571 12331273 complement(2075889..2076446) 1 NC_017341.1 hypothetical protein 2076446 12331273 SAA6008_01948 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745291.1 2075889 R 546342 CDS YP_005745292.1 384862572 12331274 complement(2076506..2077030) 1 NC_017341.1 hypothetical protein 2077030 12331274 SAA6008_01949 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745292.1 2076506 R 546342 CDS YP_005745293.1 384862573 12331275 complement(2077208..2077882) 1 NC_017341.1 transposase for IS431mec 2077882 12331275 SAA6008_01950 Staphylococcus aureus subsp. aureus str. JKD6008 transposase for IS431mec YP_005745293.1 2077208 R 546342 CDS YP_005745294.1 384862574 12331276 2077948..2078202 1 NC_017341.1 phage holin 2078202 12331276 SAA6008_01951 Staphylococcus aureus subsp. aureus str. JKD6008 phage holin YP_005745294.1 2077948 D 546342 CDS YP_005745295.1 384862575 12331277 2078214..2078969 1 NC_017341.1 N-acetylmuramoyl-L-alanine amidase 2078969 ami 12331277 ami Staphylococcus aureus subsp. aureus str. JKD6008 N-acetylmuramoyl-L-alanine amidase YP_005745295.1 2078214 D 546342 CDS YP_005745296.1 384862576 12331278 2079160..2079651 1 NC_017341.1 staphylokinase 2079651 sak 12331278 sak Staphylococcus aureus subsp. aureus str. JKD6008 staphylokinase YP_005745296.1 2079160 D 546342 CDS YP_005745297.1 384862577 12331279 2080342..2080638 1 NC_017341.1 SH3 domain-containing protein 2080638 12331279 SAA6008_01954 Staphylococcus aureus subsp. aureus str. JKD6008 SH3 domain-containing protein YP_005745297.1 2080342 D 546342 CDS YP_005745298.1 384862578 12331280 2081149..2081499 1 NC_017341.1 staphylococcal complement inhibitor SCIN 2081499 scn 12331280 scn Staphylococcus aureus subsp. aureus str. JKD6008 staphylococcal complement inhibitor SCIN YP_005745298.1 2081149 D 546342 CDS YP_005745299.1 384862579 12331281 complement(2081552..2081743) 1 NC_017341.1 hypothetical protein 2081743 12331281 SAA6008_01956 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745299.1 2081552 R 546342 CDS YP_005745300.1 384862580 12331283 2083260..2085014 1 NC_017341.1 PFAM: MAP domain protein, Originally encoded a novel 72-kDa surface protein of S. aureus capable of binding to several extracellular matrix proteins, including fibronectin, fibrinogen, vitronectin, bone sialoprotein, and thrombospondin. May undergo programmed frameshifting.; major histocompatibility complex class II analog protein, Map 2085014 map 12331283 map Staphylococcus aureus subsp. aureus str. JKD6008 major histocompatibility complex class II analog protein, Map YP_005745300.1 2083260 D 546342 CDS YP_005745301.1 384862581 12331284 2085079..2085315 1 NC_017341.1 Originally encoded a novel 72-kDa surface protein of S. aureus capable of binding to several extracellular matrix proteins, including fibronectin, fibrinogen, vitronectin, bone sialoprotein, and thrombospondin. May undergo programmed frameshifting.; major histocompatibility complex class II analog protein, Map, silent gene 2085315 12331284 SAA6008_01959 Staphylococcus aureus subsp. aureus str. JKD6008 major histocompatibility complex class II analog protein, Map, silent gene YP_005745301.1 2085079 D 546342 CDS YP_005745302.1 384862582 12331285 complement(2085639..2086925) 1 NC_017341.1 class I and II aminotransferase 2086925 12331285 SAA6008_01960 Staphylococcus aureus subsp. aureus str. JKD6008 class I and II aminotransferase YP_005745302.1 2085639 R 546342 CDS YP_005745303.1 384862583 12331286 2087466..2087642 1 NC_017341.1 hypothetical protein 2087642 12331286 SAA6008_01961 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745303.1 2087466 D 546342 CDS YP_005745304.1 384862584 12331287 2087906..2088286 1 NC_017341.1 GntR family transcriptional regulator 2088286 12331287 SAA6008_01962 Staphylococcus aureus subsp. aureus str. JKD6008 GntR family transcriptional regulator YP_005745304.1 2087906 D 546342 CDS YP_005745305.1 384862585 12331288 2088283..2089179 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, ABC protein 2089179 12331288 SAA6008_01963 Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, ABC protein YP_005745305.1 2088283 D 546342 CDS YP_005745306.1 384862586 12331289 2089180..2089860 1 NC_017341.1 hypothetical protein 2089860 12331289 SAA6008_01964 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745306.1 2089180 D 546342 CDS YP_005745307.1 384862587 12331290 2089857..2090729 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, ABC protein 2090729 12331290 SAA6008_01965 Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, ABC protein YP_005745307.1 2089857 D 546342 CDS YP_005745308.1 384862588 12331291 2090729..2091469 1 NC_017341.1 ABC transporter permease 2091469 12331291 SAA6008_01966 Staphylococcus aureus subsp. aureus str. JKD6008 ABC transporter permease YP_005745308.1 2090729 D 546342 CDS YP_005745309.1 384862589 12331292 complement(2091535..2092098) 1 NC_017341.1 hypothetical protein 2092098 12331292 SAA6008_01967 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745309.1 2091535 R 546342 CDS YP_005745310.1 384862590 12331293 2092165..2092839 1 NC_017341.1 transposase for IS-like element 2092839 12331293 SAA6008_01968 Staphylococcus aureus subsp. aureus str. JKD6008 transposase for IS-like element YP_005745310.1 2092165 D 546342 CDS YP_005745311.1 384862591 12331295 complement(2093303..2093788) 1 NC_017341.1 dihydrofolate reductase 2093788 12331295 SAA6008_01970 Staphylococcus aureus subsp. aureus str. JKD6008 dihydrofolate reductase YP_005745311.1 2093303 R 546342 CDS YP_005745312.1 384862592 12331296 complement(2093830..2094786) 1 NC_017341.1 thymidylate synthase, ThyA 2094786 thyA_1 12331296 thyA_1 Staphylococcus aureus subsp. aureus str. JKD6008 thymidylate synthase, ThyA YP_005745312.1 2093830 R 546342 CDS YP_005745313.1 384862593 12331297 2094900..2095574 1 NC_017341.1 transposase for IS431mec 2095574 12331297 SAA6008_01972 Staphylococcus aureus subsp. aureus str. JKD6008 transposase for IS431mec YP_005745313.1 2094900 D 546342 CDS YP_005745314.1 384862594 12331298 2095677..2096084 1 NC_017341.1 hypothetical protein 2096084 12331298 SAA6008_01973 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745314.1 2095677 D 546342 CDS YP_005745315.1 384862595 12331299 complement(2096673..2097905) 1 NC_017341.1 hypothetical protein 2097905 12331299 SAA6008_01974 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745315.1 2096673 R 546342 CDS YP_005745316.1 384862596 12331300 2099390..2099701 1 NC_017341.1 ortholog (SE_p514) in Staphylococcus epidermidis ATCC 12228; hypothetical protein 2099701 12331300 SAA6008_01975 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745316.1 2099390 D 546342 CDS YP_005745317.1 384862597 12331301 2099874..2100353 1 NC_017341.1 putative transcriptional regulator 2100353 12331301 SAA6008_01976 Staphylococcus aureus subsp. aureus str. JKD6008 putative transcriptional regulator YP_005745317.1 2099874 D 546342 CDS YP_005745318.1 384862598 12331302 2100359..2100997 1 NC_017341.1 hypothetical protein 2100997 12331302 SAA6008_01977 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745318.1 2100359 D 546342 CDS YP_005745319.1 384862599 12331303 2101103..2101621 1 NC_017341.1 hypothetical protein 2101621 12331303 SAA6008_01978 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745319.1 2101103 D 546342 CDS YP_005745320.1 384862600 12331304 2101699..2102565 1 NC_017341.1 hypothetical protein 2102565 12331304 SAA6008_01979 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745320.1 2101699 D 546342 CDS YP_005745321.1 384862601 12331305 2102679..2102933 1 NC_017341.1 hypothetical protein 2102933 12331305 SAA6008_01980 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745321.1 2102679 D 546342 CDS YP_005745322.1 384862602 12331306 complement(2103259..2103870) 1 NC_017341.1 putative XRE-family transcriptional regulator 2103870 12331306 SAA6008_01981 Staphylococcus aureus subsp. aureus str. JKD6008 putative XRE-family transcriptional regulator YP_005745322.1 2103259 R 546342 CDS YP_005745323.1 384862603 12331307 2104669..2104785 1 NC_017341.1 hypothetical protein 2104785 12331307 SAA6008_01982 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745323.1 2104669 D 546342 CDS YP_005745324.1 384862604 12331308 2104881..2105681 1 NC_017341.1 ABC transporter 2105681 12331308 SAA6008_01983 Staphylococcus aureus subsp. aureus str. JKD6008 ABC transporter YP_005745324.1 2104881 D 546342 CDS YP_005745325.1 384862605 12331309 2105778..2106056 1 NC_017341.1 hypothetical protein 2106056 12331309 SAA6008_01984 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745325.1 2105778 D 546342 CDS YP_005745326.1 384862606 12331312 2108278..2109024 1 NC_017341.1 putative replication-associated protein 2109024 12331312 SAA6008_01989 Staphylococcus aureus subsp. aureus str. JKD6008 putative replication-associated protein YP_005745326.1 2108278 D 546342 CDS YP_005745327.1 384862607 12331313 complement(2109359..2109919) 1 NC_017341.1 hypothetical protein 2109919 12331313 SAA6008_01990 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745327.1 2109359 R 546342 CDS YP_005745328.1 384862608 12331314 2110121..2111293 1 NC_017341.1 transposase for IS256 2111293 12331314 SAA6008_01991 Staphylococcus aureus subsp. aureus str. JKD6008 transposase for IS256 YP_005745328.1 2110121 D 546342 CDS YP_005745329.1 384862609 12331315 2111338..2111742 1 NC_017341.1 GNAT family acetyltransferase 2111742 12331315 SAA6008_01992 Staphylococcus aureus subsp. aureus str. JKD6008 GNAT family acetyltransferase YP_005745329.1 2111338 D 546342 CDS YP_005745330.1 384862610 12331316 2111743..2113182 1 NC_017341.1 PFAM: GCN5-related N-acetyltransferase; aminoglycoside phosphotransferase KEGG: efa:EFA0061 6'-aminoglycoside N-acetyltransferase; bifunctional acetyltransferase/phosphotransferase 2113182 12331316 SAA6008_01993 Staphylococcus aureus subsp. aureus str. JKD6008 bifunctional acetyltransferase/phosphotransferase YP_005745330.1 2111743 D 546342 CDS YP_005745331.1 384862611 12331317 complement(2113312..2114484) 1 NC_017341.1 transposase for IS256 2114484 12331317 SAA6008_01994 Staphylococcus aureus subsp. aureus str. JKD6008 transposase for IS256 YP_005745331.1 2113312 R 546342 CDS YP_005745332.1 384862612 12331318 complement(2114698..2116242) 1 NC_017341.1 Part of a ME; antiseptic resistance protein 2116242 qacA 12331318 qacA Staphylococcus aureus subsp. aureus str. JKD6008 antiseptic resistance protein YP_005745332.1 2114698 R 546342 CDS YP_005745333.1 384862613 12331319 2116420..2116986 1 NC_017341.1 transcriptional regulator QacR 2116986 qacR 12331319 qacR Staphylococcus aureus subsp. aureus str. JKD6008 transcriptional regulator QacR YP_005745333.1 2116420 D 546342 CDS YP_005745334.1 384862614 12331320 complement(2117119..2117304) 1 NC_017341.1 putative transcriptional regulator 2117304 12331320 SAA6008_01997 Staphylococcus aureus subsp. aureus str. JKD6008 putative transcriptional regulator YP_005745334.1 2117119 R 546342 CDS YP_005745335.1 384862615 12331321 complement(2117309..2117647) 1 NC_017341.1 hypothetical protein 2117647 12331321 SAA6008_01998 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745335.1 2117309 R 546342 CDS YP_005745336.1 384862616 12331322 complement(2117893..2118501) 1 NC_017341.1 recombinase/resolvase 2118501 12331322 SAA6008_01999 Staphylococcus aureus subsp. aureus str. JKD6008 recombinase/resolvase YP_005745336.1 2117893 R 546342 CDS YP_005745337.1 384862617 12331323 2118823..2119047 1 NC_017341.1 hypothetical protein 2119047 12331323 SAA6008_02000 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745337.1 2118823 D 546342 CDS YP_005745338.1 384862618 12331324 2119077..2119751 1 NC_017341.1 transposase for IS431mec 2119751 12331324 SAA6008_02001 Staphylococcus aureus subsp. aureus str. JKD6008 transposase for IS431mec YP_005745338.1 2119077 D 546342 CDS YP_005745339.1 384862619 12331325 complement(2120305..2121087) 1 NC_017341.1 enterotoxin P, phage associated 2121087 sep 12331325 sep Staphylococcus aureus subsp. aureus str. JKD6008 enterotoxin P, phage associated YP_005745339.1 2120305 R 546342 CDS YP_005745340.1 384862620 12331326 complement(2121451..2121825) 1 NC_017341.1 hypothetical protein 2121825 12331326 SAA6008_02003 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745340.1 2121451 R 546342 CDS YP_005745341.1 384862621 12331327 complement(2121881..2122168) 1 NC_017341.1 hypothetical protein 2122168 12331327 SAA6008_02004 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745341.1 2121881 R 546342 CDS YP_005745342.1 384862622 12331328 complement(2122214..2122366) 1 NC_017341.1 hypothetical protein 2122366 12331328 SAA6008_02005 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745342.1 2122214 R 546342 CDS YP_005745343.1 384862623 12331329 complement(2122359..2126141) 1 NC_017341.1 phage minor structural protein 2126141 12331329 SAA6008_02006 Staphylococcus aureus subsp. aureus str. JKD6008 phage minor structural protein YP_005745343.1 2122359 R 546342 CDS YP_005745344.1 384862624 12331330 complement(2126157..2127470) 1 NC_017341.1 phage tail protein 2127470 12331330 SAA6008_02007 Staphylococcus aureus subsp. aureus str. JKD6008 phage tail protein YP_005745344.1 2126157 R 546342 CDS YP_005745345.1 384862625 12331333 complement(2132224..2132358) 1 NC_017341.1 hypothetical protein 2132358 12331333 SAA6008_02010 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745345.1 2132224 R 546342 CDS YP_005745346.1 384862626 12331334 complement(2132412..2132762) 1 NC_017341.1 hypothetical protein 2132762 12331334 SAA6008_02011 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745346.1 2132412 R 546342 CDS YP_005745347.1 384862627 12331335 complement(2132812..2132952) 1 NC_017341.1 similarity with Bacterial Ig-like domain; initmin-like phage surface protein 2132952 12331335 SAA6008_02012 Staphylococcus aureus subsp. aureus str. JKD6008 initmin-like phage surface protein YP_005745347.1 2132812 R 546342 CDS YP_005745348.1 384862628 12331336 complement(2133078..2133722) 1 NC_017341.1 phage major tail protein 2133722 12331336 SAA6008_02013 Staphylococcus aureus subsp. aureus str. JKD6008 phage major tail protein YP_005745348.1 2133078 R 546342 CDS YP_005745349.1 384862629 12331337 complement(2133723..2134130) 1 NC_017341.1 hypothetical protein 2134130 12331337 SAA6008_02014 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745349.1 2133723 R 546342 CDS YP_005745350.1 384862630 12331338 complement(2134127..2134531) 1 NC_017341.1 phage protein 2134531 12331338 SAA6008_02015 Staphylococcus aureus subsp. aureus str. JKD6008 phage protein YP_005745350.1 2134127 R 546342 CDS YP_005745351.1 384862631 12331339 complement(2134528..2134890) 1 NC_017341.1 phage head-tail joining protein 2134890 12331339 SAA6008_02016 Staphylococcus aureus subsp. aureus str. JKD6008 phage head-tail joining protein YP_005745351.1 2134528 R 546342 CDS YP_005745352.1 384862632 12331340 complement(2134874..2135158) 1 NC_017341.1 putative QLRG phage DNA packaging protein 2135158 12331340 SAA6008_02017 Staphylococcus aureus subsp. aureus str. JKD6008 putative QLRG phage DNA packaging protein YP_005745352.1 2134874 R 546342 CDS YP_005745353.1 384862633 12331341 complement(2135148..2135432) 1 NC_017341.1 phage terminase small subunit 2135432 12331341 SAA6008_02018 Staphylococcus aureus subsp. aureus str. JKD6008 phage terminase small subunit YP_005745353.1 2135148 R 546342 CDS YP_005745354.1 384862634 12331342 complement(2135452..2136597) 1 NC_017341.1 phage capsid protein 2136597 12331342 SAA6008_02019 Staphylococcus aureus subsp. aureus str. JKD6008 phage capsid protein YP_005745354.1 2135452 R 546342 CDS YP_005745355.1 384862635 12331343 complement(2136621..2137352) 1 NC_017341.1 PFAM: peptidase S14 ClpP KEGG: saa:SAUSA300_1939 phi77 ORF015-like protein, putative protease; ATP-dependent Clp protease proteolytic subunit 2137352 12331343 SAA6008_02020 Staphylococcus aureus subsp. aureus str. JKD6008 ATP-dependent Clp protease proteolytic subunit YP_005745355.1 2136621 R 546342 CDS YP_005745356.1 384862636 12331344 complement(2137342..2138529) 1 NC_017341.1 phage portal protein 2138529 12331344 SAA6008_02021 Staphylococcus aureus subsp. aureus str. JKD6008 phage portal protein YP_005745356.1 2137342 R 546342 CDS YP_005745357.1 384862637 12331345 complement(2138545..2140206) 1 NC_017341.1 phage terminase large subunit 2140206 12331345 SAA6008_02022 Staphylococcus aureus subsp. aureus str. JKD6008 phage terminase large subunit YP_005745357.1 2138545 R 546342 CDS YP_005745358.1 384862638 12331346 complement(2140203..2140547) 1 NC_017341.1 hypothetical protein 2140547 12331346 SAA6008_02023 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745358.1 2140203 R 546342 CDS YP_005745359.1 384862639 12331347 complement(2140678..2140977) 1 NC_017341.1 HNH endonuclease 2140977 12331347 SAA6008_02024 Staphylococcus aureus subsp. aureus str. JKD6008 HNH endonuclease YP_005745359.1 2140678 R 546342 CDS YP_005745360.1 384862640 12331348 complement(2141209..2141625) 1 NC_017341.1 putative phage transcriptional activator 2141625 12331348 SAA6008_02025 Staphylococcus aureus subsp. aureus str. JKD6008 putative phage transcriptional activator YP_005745360.1 2141209 R 546342 CDS YP_005745361.1 384862641 12331349 complement(2141653..2141853) 1 NC_017341.1 hypothetical protein 2141853 12331349 SAA6008_02026 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745361.1 2141653 R 546342 CDS YP_005745362.1 384862642 12331350 complement(2141853..2142002) 1 NC_017341.1 PFAM: transcriptional activator RinB KEGG: sao:SAOUHSC_02202 hypothetical protein; transcriptional activator 2142002 12331350 SAA6008_02027 Staphylococcus aureus subsp. aureus str. JKD6008 transcriptional activator YP_005745362.1 2141853 R 546342 CDS YP_005745363.1 384862643 12331351 complement(2141999..2142205) 1 NC_017341.1 hypothetical protein 2142205 12331351 SAA6008_02028 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745363.1 2141999 R 546342 CDS YP_005745364.1 384862644 12331352 complement(2142242..2142778) 1 NC_017341.1 dUTPase 2142778 12331352 SAA6008_02029 Staphylococcus aureus subsp. aureus str. JKD6008 dUTPase YP_005745364.1 2142242 R 546342 CDS YP_005745365.1 384862645 12331353 complement(2142771..2143181) 1 NC_017341.1 acetyltransferase (GNAT) family protein 2143181 12331353 SAA6008_02030 Staphylococcus aureus subsp. aureus str. JKD6008 acetyltransferase (GNAT) family protein YP_005745365.1 2142771 R 546342 CDS YP_005745366.1 384862646 12331354 complement(2143178..2143687) 1 NC_017341.1 hypothetical protein 2143687 12331354 SAA6008_02031 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745366.1 2143178 R 546342 CDS YP_005745367.1 384862647 12331355 complement(2143684..2144133) 1 NC_017341.1 YopX-family protein 2144133 yopX 12331355 yopX Staphylococcus aureus subsp. aureus str. JKD6008 YopX-family protein YP_005745367.1 2143684 R 546342 CDS YP_005745368.1 384862648 12331356 complement(2144198..2144440) 1 NC_017341.1 phage protein 2144440 12331356 SAA6008_02033 Staphylococcus aureus subsp. aureus str. JKD6008 phage protein YP_005745368.1 2144198 R 546342 CDS YP_005745369.1 384862649 12331357 complement(2144444..2144749) 1 NC_017341.1 PVL phage protein 2144749 12331357 SAA6008_02034 Staphylococcus aureus subsp. aureus str. JKD6008 PVL phage protein YP_005745369.1 2144444 R 546342 CDS YP_005745370.1 384862650 12331358 complement(2144825..2145229) 1 NC_017341.1 endodeoxyribonuclease RusA 2145229 rusA 12331358 rusA Staphylococcus aureus subsp. aureus str. JKD6008 endodeoxyribonuclease RusA YP_005745370.1 2144825 R 546342 CDS YP_005745371.1 384862651 12331359 complement(2145238..2145456) 1 NC_017341.1 hypothetical protein 2145456 12331359 SAA6008_02036 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745371.1 2145238 R 546342 CDS YP_005745372.1 384862652 12331361 complement(2146377..2146847) 1 NC_017341.1 putative single-strand DNA-binding protein 2146847 ssb2 12331361 ssb2 Staphylococcus aureus subsp. aureus str. JKD6008 putative single-strand DNA-binding protein YP_005745372.1 2146377 R 546342 CDS YP_005745373.1 384862653 12331362 complement(2146848..2147333) 1 NC_017341.1 hypothetical protein 2147333 12331362 SAA6008_02039 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745373.1 2146848 R 546342 CDS YP_005745374.1 384862654 12331363 complement(2147546..2148466) 1 NC_017341.1 putative phage-related DNA recombination protein 2148466 recT 12331363 recT Staphylococcus aureus subsp. aureus str. JKD6008 putative phage-related DNA recombination protein YP_005745374.1 2147546 R 546342 CDS YP_005745375.1 384862655 12331364 complement(2148468..2150411) 1 NC_017341.1 RecF/RecN/SMC N terminal domain-containing protein 2150411 12331364 SAA6008_02041 Staphylococcus aureus subsp. aureus str. JKD6008 RecF/RecN/SMC N terminal domain-containing protein YP_005745375.1 2148468 R 546342 CDS YP_005745376.1 384862656 12331365 complement(2150692..2150952) 1 NC_017341.1 phage protein 2150952 12331365 SAA6008_02042 Staphylococcus aureus subsp. aureus str. JKD6008 phage protein YP_005745376.1 2150692 R 546342 CDS YP_005745377.1 384862657 12331366 complement(2151203..2151523) 1 NC_017341.1 hypothetical protein 2151523 12331366 SAA6008_02043 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745377.1 2151203 R 546342 CDS YP_005745378.1 384862658 12331367 2151582..2152214 1 NC_017341.1 hypothetical protein 2152214 12331367 SAA6008_02044 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745378.1 2151582 D 546342 CDS YP_005745379.1 384862659 12331368 complement(2152229..2152369) 1 NC_017341.1 hypothetical protein 2152369 12331368 SAA6008_02045 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745379.1 2152229 R 546342 CDS YP_005745380.1 384862660 12331369 complement(2152400..2152594) 1 NC_017341.1 hypothetical protein 2152594 12331369 SAA6008_02046 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745380.1 2152400 R 546342 CDS YP_005745381.1 384862661 12331370 complement(2152611..2153363) 1 NC_017341.1 phage antirepressor protein 2153363 12331370 SAA6008_02047 Staphylococcus aureus subsp. aureus str. JKD6008 phage antirepressor protein YP_005745381.1 2152611 R 546342 CDS YP_005745382.1 384862662 12331371 2153420..2153959 1 NC_017341.1 hypothetical protein 2153959 12331371 SAA6008_02048 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745382.1 2153420 D 546342 CDS YP_005745383.1 384862663 12331372 complement(2153983..2154243) 1 NC_017341.1 hypothetical protein 2154243 12331372 SAA6008_02049 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745383.1 2153983 R 546342 CDS YP_005745384.1 384862664 12331373 complement(2154256..2154495) 1 NC_017341.1 Some Domain similarity with HTH_XRE (Helix-turn-helix XRE-family like proteins); putative plasmid copy control protein 2154495 12331373 SAA6008_02050 Staphylococcus aureus subsp. aureus str. JKD6008 putative plasmid copy control protein YP_005745384.1 2154256 R 546342 CDS YP_005745385.1 384862665 12331374 2154645..2155373 1 NC_017341.1 PFAM: helix-turn-helix domain protein; peptidase S24 S26A and S26B KEGG: sav:SAV1998 repressor homolog; phage transcriptional regulator 2155373 12331374 SAA6008_02051 Staphylococcus aureus subsp. aureus str. JKD6008 phage transcriptional regulator YP_005745385.1 2154645 D 546342 CDS YP_005745386.1 384862666 12331375 2155385..2155540 1 NC_017341.1 hypothetical protein 2155540 12331375 SAA6008_02052 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745386.1 2155385 D 546342 CDS YP_005745387.1 384862667 12331376 2155527..2155712 1 NC_017341.1 hypothetical protein 2155712 12331376 SAA6008_02053 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745387.1 2155527 D 546342 CDS YP_005745388.1 384862668 12331377 2155912..2156079 1 NC_017341.1 hypothetical protein 2156079 12331377 SAA6008_02054 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745388.1 2155912 D 546342 CDS YP_005745389.1 384862669 12331378 2156219..2156758 1 NC_017341.1 PemK-like growth inhibitor protein 2156758 pemK 12331378 pemK Staphylococcus aureus subsp. aureus str. JKD6008 PemK-like growth inhibitor protein YP_005745389.1 2156219 D 546342 CDS YP_005745390.1 384862670 12331379 2156931..2157968 1 NC_017341.1 PFAM: phage integrase family protein KEGG: sau:SA1810 integrase; bacteriophage integrase 2157968 12331379 SAA6008_02056 Staphylococcus aureus subsp. aureus str. JKD6008 bacteriophage integrase YP_005745390.1 2156931 D 546342 CDS YP_005745391.1 384862671 12331380 2158025..2158849 1 NC_017341.1 PFAM: Endonuclease/exonuclease/phosphatase; phospholipase C 2158849 12331380 SAA6008_02057 Staphylococcus aureus subsp. aureus str. JKD6008 phospholipase C YP_005745391.1 2158025 D 546342 CDS YP_005745392.1 384862672 12331381 complement(2159087..2160103) 1 NC_017341.1 leukocidin/hemolysin toxin family protein 2160103 12331381 SAA6008_02058 Staphylococcus aureus subsp. aureus str. JKD6008 leukocidin/hemolysin toxin family protein YP_005745392.1 2159087 R 546342 CDS YP_005745393.1 384862673 12331382 complement(2160125..2161180) 1 NC_017341.1 leukocidin/lemolysin toxin family protein 2161180 12331382 SAA6008_02059 Staphylococcus aureus subsp. aureus str. JKD6008 leukocidin/lemolysin toxin family protein YP_005745393.1 2160125 R 546342 CDS YP_005745394.1 384862674 12331383 2161615..2162838 1 NC_017341.1 succinyl-diaminopimelate desuccinylase 2162838 argE 12331383 argE Staphylococcus aureus subsp. aureus str. JKD6008 succinyl-diaminopimelate desuccinylase YP_005745394.1 2161615 D 546342 CDS YP_005745395.1 384862675 12331384 complement(2163210..2164055) 1 NC_017341.1 possible polyketide biosynthesis O-methyltransferase; tetracenomycin polyketide synthesis O-methyltransferase, TcmP 2164055 12331384 SAA6008_02061 Staphylococcus aureus subsp. aureus str. JKD6008 tetracenomycin polyketide synthesis O-methyltransferase, TcmP YP_005745395.1 2163210 R 546342 CDS YP_005745396.1 384862676 12331385 complement(2164117..2165028) 1 NC_017341.1 ferrichrome ABC superfamily ATP binding cassette transporter, binding protein 2165028 12331385 SAA6008_02062 Staphylococcus aureus subsp. aureus str. JKD6008 ferrichrome ABC superfamily ATP binding cassette transporter, binding protein YP_005745396.1 2164117 R 546342 CDS YP_005745397.1 384862677 12331386 2165189..2166496 1 NC_017341.1 Trk family potassium (K+) transporter, ABC protein 2166496 trkG 12331386 trkG Staphylococcus aureus subsp. aureus str. JKD6008 Trk family potassium (K+) transporter, ABC protein YP_005745397.1 2165189 D 546342 CDS YP_005745398.1 384862678 12331387 complement(2167349..2167792) 1 NC_017341.1 acetyltransferase (GNAT) family protein 2167792 12331387 SAA6008_02064 Staphylococcus aureus subsp. aureus str. JKD6008 acetyltransferase (GNAT) family protein YP_005745398.1 2167349 R 546342 CDS YP_005745399.1 384862679 12331388 complement(2167957..2168298) 1 NC_017341.1 hypothetical protein 2168298 12331388 SAA6008_02065 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745399.1 2167957 R 546342 CDS YP_005745400.1 384862680 12331389 complement(2168652..2169242) 1 NC_017341.1 bacteriophage terminase small subunit 2169242 12331389 SAA6008_02066 Staphylococcus aureus subsp. aureus str. JKD6008 bacteriophage terminase small subunit YP_005745400.1 2168652 R 546342 CDS YP_005745401.1 384862681 12331390 complement(2170153..2171769) 1 NC_017341.1 GroEL is the larger subunit of the GroEL/GroES cytosolic chaperonin; co-chaperonin GroEL 2171769 groEL 12331390 groEL Staphylococcus aureus subsp. aureus str. JKD6008 co-chaperonin GroEL YP_005745401.1 2170153 R 546342 CDS YP_005745402.1 384862682 12331391 complement(2171845..2172129) 1 NC_017341.1 GroES is the smaller subunit of the GroEL/GroES cytosolic chaperonin; co-chaperonin GroES 2172129 groES 12331391 groES Staphylococcus aureus subsp. aureus str. JKD6008 co-chaperonin GroES YP_005745402.1 2171845 R 546342 CDS YP_005745403.1 384862683 12331392 2172304..2173047 1 NC_017341.1 some identity with putative membrane peptidase ydiL; hypothetical protein 2173047 12331392 SAA6008_02069 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745403.1 2172304 D 546342 CDS YP_005745404.1 384862684 12331393 complement(2173072..2174331) 1 NC_017341.1 Ser-Asp rich fibrinogen/bone sialoprotein bindin protein SdrH 2174331 sdrH 12331393 sdrH Staphylococcus aureus subsp. aureus str. JKD6008 Ser-Asp rich fibrinogen/bone sialoprotein bindin protein SdrH YP_005745404.1 2173072 R 546342 CDS YP_005745405.1 384862685 12331394 2174528..2175154 1 NC_017341.1 nitroreductase family protein 2175154 12331394 SAA6008_02071 Staphylococcus aureus subsp. aureus str. JKD6008 nitroreductase family protein YP_005745405.1 2174528 D 546342 CDS YP_005745406.1 384862686 12331395 2175515..2176300 1 NC_017341.1 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 2176300 12331395 SAA6008_02072 Staphylococcus aureus subsp. aureus str. JKD6008 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_005745406.1 2175515 D 546342 CDS YP_005745407.1 384862687 12331396 complement(2176897..2177031) 1 NC_017341.1 Delta-lysin is a 26 amino acid, hemolytic peptide toxin secreted by Staphylococcus aureus; delta-hemolysin 2177031 hld 12331396 hld Staphylococcus aureus subsp. aureus str. JKD6008 delta-hemolysin YP_005745407.1 2176897 R 546342 CDS YP_005745408.1 384862688 12331397 2177267..2177836 1 NC_017341.1 accessory gene regulator B 2177836 agrB 12331397 agrB Staphylococcus aureus subsp. aureus str. JKD6008 accessory gene regulator B YP_005745408.1 2177267 D 546342 CDS YP_005745409.1 384862689 12331398 2177833..2177973 1 NC_017341.1 staphylococcal accessory gene regulator protein D 2177973 agrD 12331398 agrD Staphylococcus aureus subsp. aureus str. JKD6008 staphylococcal accessory gene regulator protein D YP_005745409.1 2177833 D 546342 CDS YP_005745410.1 384862690 12331399 2178619..2179290 1 NC_017341.1 staphylococcal accessory gene regulator protein C 2179290 12331399 SAA6008_02076 Staphylococcus aureus subsp. aureus str. JKD6008 staphylococcal accessory gene regulator protein C YP_005745410.1 2178619 D 546342 CDS YP_005745411.1 384862691 12331400 2179309..2180025 1 NC_017341.1 autoinducer sensor protein response regulator protein 2180025 agrA 12331400 agrA Staphylococcus aureus subsp. aureus str. JKD6008 autoinducer sensor protein response regulator protein YP_005745411.1 2179309 D 546342 CDS YP_005745412.1 384862692 12331401 complement(2180392..2181351) 1 NC_017341.1 identified by similarity to EGAD:129878; match to protein family HMM PF00294; fructokinase 2181351 12331401 SAA6008_02078 Staphylococcus aureus subsp. aureus str. JKD6008 fructokinase YP_005745412.1 2180392 R 546342 CDS YP_005745413.1 384862693 12331402 complement(2181348..2182832) 1 NC_017341.1 sucrose-6-phosphate hydrolase 2182832 scrB 12331402 scrB Staphylococcus aureus subsp. aureus str. JKD6008 sucrose-6-phosphate hydrolase YP_005745413.1 2181348 R 546342 CDS YP_005745414.1 384862694 12331403 complement(2182981..2183931) 1 NC_017341.1 sucrose operon repressor 2183931 scrR 12331403 scrR Staphylococcus aureus subsp. aureus str. JKD6008 sucrose operon repressor YP_005745414.1 2182981 R 546342 CDS YP_005745415.1 384862695 12331404 complement(2184114..2185340) 1 NC_017341.1 AMT family ammonium or ammonia transporter 2185340 nrgA 12331404 nrgA Staphylococcus aureus subsp. aureus str. JKD6008 AMT family ammonium or ammonia transporter YP_005745415.1 2184114 R 546342 CDS YP_005745416.1 384862696 12331405 complement(2185571..2185768) 1 NC_017341.1 Some domain similarity with SirA-like protein; putative transcriptional regulator 2185768 12331405 SAA6008_02082 Staphylococcus aureus subsp. aureus str. JKD6008 putative transcriptional regulator YP_005745416.1 2185571 R 546342 CDS YP_005745417.1 384862697 12331406 complement(2185855..2186934) 1 NC_017341.1 hypothetical protein 2186934 12331406 SAA6008_02083 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745417.1 2185855 R 546342 CDS YP_005745418.1 384862698 12331407 complement(2187238..2187873) 1 NC_017341.1 redox-sensing transcriptional repressor rex 2187873 rex 12331407 rex Staphylococcus aureus subsp. aureus str. JKD6008 redox-sensing transcriptional repressor rex YP_005745418.1 2187238 R 546342 CDS YP_005745419.1 384862699 12331408 2188126..2190054 1 NC_017341.1 putative ABC transporter ATP-binding protein 2190054 12331408 SAA6008_02085 Staphylococcus aureus subsp. aureus str. JKD6008 putative ABC transporter ATP-binding protein YP_005745419.1 2188126 D 546342 CDS YP_005745420.1 384862700 12331409 2190415..2192025 1 NC_017341.1 DNA mismatch repair ATPase 2192025 12331409 SAA6008_02086 Staphylococcus aureus subsp. aureus str. JKD6008 DNA mismatch repair ATPase YP_005745420.1 2190415 D 546342 CDS YP_005745421.1 384862701 12331410 complement(2192127..2193152) 1 NC_017341.1 putative DNA-binding/iron metalloprotein/AP endonuclease 2193152 12331410 SAA6008_02087 Staphylococcus aureus subsp. aureus str. JKD6008 putative DNA-binding/iron metalloprotein/AP endonuclease YP_005745421.1 2192127 R 546342 CDS YP_005745422.1 384862702 12331411 complement(2193145..2193609) 1 NC_017341.1 ribosomal-protein-alanine acetyltransferase 2193609 rimI 12331411 rimI Staphylococcus aureus subsp. aureus str. JKD6008 ribosomal-protein-alanine acetyltransferase YP_005745422.1 2193145 R 546342 CDS YP_005745423.1 384862703 12331412 complement(2193582..2194244) 1 NC_017341.1 glycoprotease 2194244 12331412 SAA6008_02089 Staphylococcus aureus subsp. aureus str. JKD6008 glycoprotease YP_005745423.1 2193582 R 546342 CDS YP_005745424.1 384862704 12331413 complement(2194225..2194719) 1 NC_017341.1 predicted to have essential role in cell wall biosynthesis; putative ATPase 2194719 yjeE 12331413 yjeE Staphylococcus aureus subsp. aureus str. JKD6008 putative ATPase YP_005745424.1 2194225 R 546342 CDS YP_005745425.1 384862705 12331414 2195209..2196885 1 NC_017341.1 putative dihydroxy-acid dehydratase 2196885 ilvD 12331414 ilvD Staphylococcus aureus subsp. aureus str. JKD6008 putative dihydroxy-acid dehydratase YP_005745425.1 2195209 D 546342 CDS YP_005745426.1 384862706 12331415 2196913..2198682 1 NC_017341.1 acetolactate synthase large subunit 2198682 ilvB 12331415 ilvB Staphylococcus aureus subsp. aureus str. JKD6008 acetolactate synthase large subunit YP_005745426.1 2196913 D 546342 CDS YP_005745427.1 384862707 12331416 2198682..2198936 1 NC_017341.1 acetolactate synthase 1 regulatory subunit 2198936 12331416 SAA6008_02093 Staphylococcus aureus subsp. aureus str. JKD6008 acetolactate synthase 1 regulatory subunit YP_005745427.1 2198682 D 546342 CDS YP_005745428.1 384862708 12331417 2199073..2200077 1 NC_017341.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 2200077 ilvC 12331417 ilvC Staphylococcus aureus subsp. aureus str. JKD6008 ketol-acid reductoisomerase YP_005745428.1 2199073 D 546342 CDS YP_005745429.1 384862709 12331418 2200107..2201636 1 NC_017341.1 2-isopropylmalate synthase 2201636 leuA 12331418 leuA Staphylococcus aureus subsp. aureus str. JKD6008 2-isopropylmalate synthase YP_005745429.1 2200107 D 546342 CDS YP_005745430.1 384862710 12331419 2201639..2202685 1 NC_017341.1 3-isopropylmalate dehydrogenase 2202685 leuB 12331419 leuB Staphylococcus aureus subsp. aureus str. JKD6008 3-isopropylmalate dehydrogenase YP_005745430.1 2201639 D 546342 CDS YP_005745431.1 384862711 12331420 2202699..2204069 1 NC_017341.1 3-isopropylmalate dehydratase large subunit 2204069 leuC 12331420 leuC Staphylococcus aureus subsp. aureus str. JKD6008 3-isopropylmalate dehydratase large subunit YP_005745431.1 2202699 D 546342 CDS YP_005745432.1 384862712 12331421 2204070..2204642 1 NC_017341.1 3-isopropylmalate dehydratase small subunit 2204642 leuD 12331421 leuD Staphylococcus aureus subsp. aureus str. JKD6008 3-isopropylmalate dehydratase small subunit YP_005745432.1 2204070 D 546342 CDS YP_005745433.1 384862713 12331422 2204657..2205925 1 NC_017341.1 catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic; threonine dehydratase biosynthetic, IlvA_1 2205925 ilvA_1 12331422 ilvA_1 Staphylococcus aureus subsp. aureus str. JKD6008 threonine dehydratase biosynthetic, IlvA_1 YP_005745433.1 2204657 D 546342 CDS YP_005745434.1 384862714 12331423 complement(2205974..2206129) 1 NC_017341.1 hypothetical protein 2206129 12331423 SAA6008_02100 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745434.1 2205974 R 546342 CDS YP_005745435.1 384862715 12331429 complement(2212288..2212743) 1 NC_017341.1 Domain similarity with SprT (predicted to have roles in transcription elongation). Contains a conserved HExxH motif, indicating a metalloprotease function.; hypothetical protein 2212743 12331429 SAA6008_02101 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745435.1 2212288 R 546342 CDS YP_005745436.1 384862716 12331430 complement(2212736..2214886) 1 NC_017341.1 contains an S1 RNA binding domain at C-terminal; transcription accessory protein (S1 RNA binding) 2214886 tex 12331430 tex Staphylococcus aureus subsp. aureus str. JKD6008 transcription accessory protein (S1 RNA binding) YP_005745436.1 2212736 R 546342 CDS YP_005745437.1 384862717 12331431 complement(2215320..2216090) 1 NC_017341.1 RNA polymerase sigma factor SigB 2216090 sigB 12331431 sigB Staphylococcus aureus subsp. aureus str. JKD6008 RNA polymerase sigma factor SigB YP_005745437.1 2215320 R 546342 CDS YP_005745438.1 384862718 12331432 complement(2216065..2216544) 1 NC_017341.1 anti-sigma-B factor, serine-protein kinase 2216544 rsbW 12331432 rsbW Staphylococcus aureus subsp. aureus str. JKD6008 anti-sigma-B factor, serine-protein kinase YP_005745438.1 2216065 R 546342 CDS YP_005745439.1 384862719 12331433 complement(2216546..2216872) 1 NC_017341.1 anti-sigma-B factor, antagonist 2216872 rsbV 12331433 rsbV Staphylococcus aureus subsp. aureus str. JKD6008 anti-sigma-B factor, antagonist YP_005745439.1 2216546 R 546342 CDS YP_005745440.1 384862720 12331434 complement(2216991..2217992) 1 NC_017341.1 putative sigma factor sigB regulation protein 2217992 rsbU 12331434 rsbU Staphylococcus aureus subsp. aureus str. JKD6008 putative sigma factor sigB regulation protein YP_005745440.1 2216991 R 546342 CDS YP_005745441.1 384862721 12331435 complement(2218341..2218703) 1 NC_017341.1 PFAM: PemK family protein; Toxin MazF 2218703 mazF 12331435 mazF Staphylococcus aureus subsp. aureus str. JKD6008 Toxin MazF YP_005745441.1 2218341 R 546342 CDS YP_005745442.1 384862722 12331436 complement(2218700..2218870) 1 NC_017341.1 hypothetical protein 2218870 12331436 SAA6008_02108 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745442.1 2218700 R 546342 CDS YP_005745443.1 384862723 12331437 complement(2218955..2220073) 1 NC_017341.1 alanine racemase 1 2220073 alr 12331437 alr Staphylococcus aureus subsp. aureus str. JKD6008 alanine racemase 1 YP_005745443.1 2218955 R 546342 CDS YP_005745444.1 384862724 12331438 complement(2220169..2220528) 1 NC_017341.1 4'-phosphopantetheinyl transferase 2220528 acpS 12331438 acpS Staphylococcus aureus subsp. aureus str. JKD6008 4'-phosphopantetheinyl transferase YP_005745444.1 2220169 R 546342 CDS YP_005745445.1 384862725 12331439 complement(2220532..2221005) 1 NC_017341.1 membrane-flanked domain-containing protein 2221005 12331439 SAA6008_02111 Staphylococcus aureus subsp. aureus str. JKD6008 membrane-flanked domain-containing protein YP_005745445.1 2220532 R 546342 CDS YP_005745446.1 384862726 12331440 complement(2221010..2222593) 1 NC_017341.1 membrane-flanked domain-containing protein 2222593 12331440 SAA6008_02112 Staphylococcus aureus subsp. aureus str. JKD6008 membrane-flanked domain-containing protein YP_005745446.1 2221010 R 546342 CDS YP_005745447.1 384862727 12331441 complement(2222586..2223065) 1 NC_017341.1 bacterial membrane flanked domain protein 2223065 12331441 SAA6008_02113 Staphylococcus aureus subsp. aureus str. JKD6008 bacterial membrane flanked domain protein YP_005745447.1 2222586 R 546342 CDS YP_005745448.1 384862728 12331442 complement(2223273..2223833) 1 NC_017341.1 P-ATPase superfamily P-type ATPase potassium (K+) transporter subunit C 2223833 kdpC 12331442 kdpC Staphylococcus aureus subsp. aureus str. JKD6008 P-ATPase superfamily P-type ATPase potassium (K+) transporter subunit C YP_005745448.1 2223273 R 546342 CDS YP_005745449.1 384862729 12331443 complement(2223853..2225889) 1 NC_017341.1 P-ATPase superfamily P-type ATPase potassium (K+) transporter subunit B 2225889 kdpB 12331443 kdpB Staphylococcus aureus subsp. aureus str. JKD6008 P-ATPase superfamily P-type ATPase potassium (K+) transporter subunit B YP_005745449.1 2223853 R 546342 CDS YP_005745450.1 384862730 12331444 complement(2225899..2227551) 1 NC_017341.1 P-ATPase superfamily P-type ATPase potassium (K+) transporter subunit A 2227551 kdpA 12331444 kdpA Staphylococcus aureus subsp. aureus str. JKD6008 P-ATPase superfamily P-type ATPase potassium (K+) transporter subunit A YP_005745450.1 2225899 R 546342 CDS YP_005745451.1 384862731 12331445 2227847..2230504 1 NC_017341.1 osmosensitive K+ channel histidine kinase 2230504 kdpD 12331445 kdpD Staphylococcus aureus subsp. aureus str. JKD6008 osmosensitive K+ channel histidine kinase YP_005745451.1 2227847 D 546342 CDS YP_005745452.1 384862732 12331446 2230504..2231199 1 NC_017341.1 winged helix family two component transcriptional regulator 2231199 kdpE 12331446 kdpE Staphylococcus aureus subsp. aureus str. JKD6008 winged helix family two component transcriptional regulator YP_005745452.1 2230504 D 546342 CDS YP_005745453.1 384862733 12331447 complement(2231568..2233088) 1 NC_017341.1 ATP-dependent RNA helicase DEAD box family protein 2233088 12331447 SAA6008_02119 Staphylococcus aureus subsp. aureus str. JKD6008 ATP-dependent RNA helicase DEAD box family protein YP_005745453.1 2231568 R 546342 CDS YP_005745454.1 384862734 12331448 complement(2233605..2234963) 1 NC_017341.1 putative UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-- D-alanyl-D-alanyl ligase 2234963 murF 12331448 murF Staphylococcus aureus subsp. aureus str. JKD6008 putative UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-- D-alanyl-D-alanyl ligase YP_005745454.1 2233605 R 546342 CDS YP_005745455.1 384862735 12331449 complement(2234978..2236063) 1 NC_017341.1 D-alanyl-alanine synthetase A 2236063 ddl 12331449 ddl Staphylococcus aureus subsp. aureus str. JKD6008 D-alanyl-alanine synthetase A YP_005745455.1 2234978 R 546342 CDS YP_005745456.1 384862736 12331450 2236366..2237568 1 NC_017341.1 identified by match to protein family HMM PF01098, similar to rod shape determining protein RodA FtsW; FtsW/RodA/SpoVE family cell division protein 2237568 12331450 SAA6008_02122 Staphylococcus aureus subsp. aureus str. JKD6008 FtsW/RodA/SpoVE family cell division protein YP_005745456.1 2236366 D 546342 CDS YP_005745457.1 384862737 12331451 complement(2237832..2237969) 1 NC_017341.1 hypothetical protein 2237969 12331451 SAA6008_02123 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745457.1 2237832 R 546342 CDS YP_005745458.1 384862738 12331452 complement(2238097..2238306) 1 NC_017341.1 hypothetical protein 2238306 12331452 SAA6008_02124 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745458.1 2238097 R 546342 CDS YP_005745459.1 384862739 12331453 complement(2238318..2238611) 1 NC_017341.1 hypothetical protein 2238611 12331453 SAA6008_02125 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745459.1 2238318 R 546342 CDS YP_005745460.1 384862740 12331454 2238777..2240261 1 NC_017341.1 phospholipase D/Transphosphatidylase 2240261 cls2 12331454 cls2 Staphylococcus aureus subsp. aureus str. JKD6008 phospholipase D/Transphosphatidylase YP_005745460.1 2238777 D 546342 CDS YP_005745461.1 384862741 12331455 2240289..2240936 1 NC_017341.1 metal-dependent phosphohydrolase, HD family 2240936 12331455 SAA6008_02127 Staphylococcus aureus subsp. aureus str. JKD6008 metal-dependent phosphohydrolase, HD family YP_005745461.1 2240289 D 546342 CDS YP_005745462.1 384862742 12331456 complement(2241749..2242621) 1 NC_017341.1 OxaI/YidC membrane insertion protein 2242621 oxaI 12331456 oxaI Staphylococcus aureus subsp. aureus str. JKD6008 OxaI/YidC membrane insertion protein YP_005745462.1 2241749 R 546342 CDS YP_005745463.1 384862743 12331457 complement(2242707..2243348) 1 NC_017341.1 putative thiamine-phosphate pyrophosphorylase 2243348 thiE 12331457 thiE Staphylococcus aureus subsp. aureus str. JKD6008 putative thiamine-phosphate pyrophosphorylase YP_005745463.1 2242707 R 546342 CDS YP_005745464.1 384862744 12331458 complement(2243350..2244141) 1 NC_017341.1 catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP; hydroxyethylthiazole kinase 2244141 thiM 12331458 thiM Staphylococcus aureus subsp. aureus str. JKD6008 hydroxyethylthiazole kinase YP_005745464.1 2243350 R 546342 CDS YP_005745465.1 384862745 12331459 complement(2244125..2244955) 1 NC_017341.1 putative phosphomethylpyrimidine kinase 2244955 thiD 12331459 thiD Staphylococcus aureus subsp. aureus str. JKD6008 putative phosphomethylpyrimidine kinase YP_005745465.1 2244125 R 546342 CDS YP_005745466.1 384862746 12331460 complement(2244948..2245637) 1 NC_017341.1 thiaminase-2 2245637 tenA 12331460 tenA Staphylococcus aureus subsp. aureus str. JKD6008 thiaminase-2 YP_005745466.1 2244948 R 546342 CDS YP_005745467.1 384862747 12331461 complement(2245737..2245862) 1 NC_017341.1 hypothetical protein 2245862 12331461 SAA6008_02133 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745467.1 2245737 R 546342 CDS YP_005745468.1 384862748 12331462 complement(2246023..2246718) 1 NC_017341.1 transglycosylase 2246718 sceD 12331462 sceD Staphylococcus aureus subsp. aureus str. JKD6008 transglycosylase YP_005745468.1 2246023 R 546342 CDS YP_005745469.1 384862749 12331463 complement(2247107..2247502) 1 NC_017341.1 TIGRFAM: single-strand binding protein PFAM: single-strand binding protein/Primosomal replication protein n KEGG: sao:SAOUHSC_02334 bacteriophage L54a, single-stranded DNA binding protein; single-stranded DNA-binding protein 2247502 12331463 SAA6008_02135 Staphylococcus aureus subsp. aureus str. JKD6008 single-stranded DNA-binding protein YP_005745469.1 2247107 R 546342 CDS YP_005745470.1 384862750 12331464 2247696..2248136 1 NC_017341.1 hypothetical protein 2248136 ywpF 12331464 ywpF Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745470.1 2247696 D 546342 CDS YP_005745471.1 384862751 12331465 complement(2248195..2248635) 1 NC_017341.1 (3R)-hydroxymyristoyl-ACP dehydratase 2248635 fabZ 12331465 fabZ Staphylococcus aureus subsp. aureus str. JKD6008 (3R)-hydroxymyristoyl-ACP dehydratase YP_005745471.1 2248195 R 546342 CDS YP_005745472.1 384862752 12331466 complement(2248669..2249934) 1 NC_017341.1 putative UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2249934 murA 12331466 murA Staphylococcus aureus subsp. aureus str. JKD6008 putative UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_005745472.1 2248669 R 546342 CDS YP_005745473.1 384862753 12331467 complement(2250045..2250278) 1 NC_017341.1 hypothetical protein 2250278 12331467 SAA6008_02139 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745473.1 2250045 R 546342 CDS YP_005745474.1 384862754 12331468 complement(2250840..2251244) 1 NC_017341.1 TIGRFAM: ATP synthase F1, epsilon subunit PFAM: H+transporting two-sector ATPase delta/epsilon subunit KEGG: sao:SAOUHSC_02340 ATP synthase F1, epsilon subunit; ATP synthase epsilon chain, AtpE 2251244 atpE 12331468 atpE Staphylococcus aureus subsp. aureus str. JKD6008 ATP synthase epsilon chain, AtpE YP_005745474.1 2250840 R 546342 CDS YP_005745475.1 384862755 12331469 complement(2251264..2252676) 1 NC_017341.1 produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; ATP synthase subunit beta, AtpB 2252676 atpB 12331469 atpB Staphylococcus aureus subsp. aureus str. JKD6008 ATP synthase subunit beta, AtpB YP_005745475.1 2251264 R 546342 CDS YP_005745476.1 384862756 12331470 complement(2252698..2253564) 1 NC_017341.1 produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; ATP synthase subunit gamma, AtpG 2253564 atpG 12331470 atpG Staphylococcus aureus subsp. aureus str. JKD6008 ATP synthase subunit gamma, AtpG YP_005745476.1 2252698 R 546342 CDS YP_005745477.1 384862757 12331471 complement(2253595..2255103) 1 NC_017341.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; ATP synthase subunit alpha, AtpA 2255103 atpA 12331471 atpA Staphylococcus aureus subsp. aureus str. JKD6008 ATP synthase subunit alpha, AtpA YP_005745477.1 2253595 R 546342 CDS YP_005745478.1 384862758 12331472 complement(2255125..2255664) 1 NC_017341.1 TIGRFAM: ATP synthase F1, delta subunit PFAM: H+transporting two-sector ATPase delta (OSCP) subunit KEGG: sas:SAS2009 putative ATP synthase delta chain; ATP synthase subunit delta 2255664 atpD 12331472 atpD Staphylococcus aureus subsp. aureus str. JKD6008 ATP synthase subunit delta YP_005745478.1 2255125 R 546342 CDS YP_005745479.1 384862759 12331473 complement(2255664..2256185) 1 NC_017341.1 TIGRFAM: ATP synthase F0, B subunit PFAM: H+transporting two-sector ATPase B/B' subunit KEGG: sao:SAOUHSC_02347 ATP synthase F0, B subunit; ATP synthase subunit beta, AtpB_1 2256185 atpB_1 12331473 atpB_1 Staphylococcus aureus subsp. aureus str. JKD6008 ATP synthase subunit beta, AtpB_1 YP_005745479.1 2255664 R 546342 CDS YP_005745480.1 384862760 12331474 complement(2256383..2256595) 1 NC_017341.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; ATP synthase subunit C, AtpC 2256595 atpC 12331474 atpC Staphylococcus aureus subsp. aureus str. JKD6008 ATP synthase subunit C, AtpC YP_005745480.1 2256383 R 546342 CDS YP_005745481.1 384862761 12331475 complement(2256638..2257366) 1 NC_017341.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; ATP synthase subunit alpha, AtpA_1 2257366 atpA_1 12331475 atpA_1 Staphylococcus aureus subsp. aureus str. JKD6008 ATP synthase subunit alpha, AtpA_1 YP_005745481.1 2256638 R 546342 CDS YP_005745482.1 384862762 12331476 complement(2257387..2257740) 1 NC_017341.1 ATP synthase I, AtpI 2257740 atpI 12331476 atpI Staphylococcus aureus subsp. aureus str. JKD6008 ATP synthase I, AtpI YP_005745482.1 2257387 R 546342 CDS YP_005745483.1 384862763 12331477 complement(2257907..2259034) 1 NC_017341.1 UDP-N-acetylglucosamine 2-epimerase 2259034 mnaA 12331477 mnaA Staphylococcus aureus subsp. aureus str. JKD6008 UDP-N-acetylglucosamine 2-epimerase YP_005745483.1 2257907 R 546342 CDS YP_005745484.1 384862764 12331478 complement(2259058..2259687) 1 NC_017341.1 uracil phosphoribosyl transferase 2259687 upp 12331478 upp Staphylococcus aureus subsp. aureus str. JKD6008 uracil phosphoribosyl transferase YP_005745484.1 2259058 R 546342 CDS YP_005745485.1 384862765 12331479 complement(2259715..2260953) 1 NC_017341.1 serine hydroxymethyl transferase 2260953 glyA 12331479 glyA Staphylococcus aureus subsp. aureus str. JKD6008 serine hydroxymethyl transferase YP_005745485.1 2259715 R 546342 CDS YP_005745486.1 384862766 12331480 complement(2260980..2261504) 1 NC_017341.1 hypothetical protein 2261504 12331480 SAA6008_02152 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745486.1 2260980 R 546342 CDS YP_005745487.1 384862767 12331481 complement(2261611..2262030) 1 NC_017341.1 putative low molecular weight protein-tyrosine-phosphatase 2262030 12331481 SAA6008_02153 Staphylococcus aureus subsp. aureus str. JKD6008 putative low molecular weight protein-tyrosine-phosphatase YP_005745487.1 2261611 R 546342 CDS YP_005745488.1 384862768 12331482 complement(2262027..2263100) 1 NC_017341.1 yrdC/SUA5 multi-domain translation factor protein 2263100 sua5 12331482 sua5 Staphylococcus aureus subsp. aureus str. JKD6008 yrdC/SUA5 multi-domain translation factor protein YP_005745488.1 2262027 R 546342 CDS YP_005745489.1 384862769 12331483 complement(2263157..2263993) 1 NC_017341.1 TIGRFAM: modification methylase, HemK family PFAM: methyltransferase small KEGG: sav:SAV2117 hemK protein; modification methylase HemK family protein 2263993 12331483 SAA6008_02155 Staphylococcus aureus subsp. aureus str. JKD6008 modification methylase HemK family protein YP_005745489.1 2263157 R 546342 CDS YP_005745490.1 384862770 12331484 complement(2263980..2265056) 1 NC_017341.1 peptide chain release factor RF1 2265056 prfA 12331484 prfA Staphylococcus aureus subsp. aureus str. JKD6008 peptide chain release factor RF1 YP_005745490.1 2263980 R 546342 CDS YP_005745491.1 384862771 12331485 complement(2265057..2265656) 1 NC_017341.1 putative thymidine kinase 2265656 tdk 12331485 tdk Staphylococcus aureus subsp. aureus str. JKD6008 putative thymidine kinase YP_005745491.1 2265057 R 546342 CDS YP_005745492.1 384862772 12331486 complement(2266003..2266257) 1 NC_017341.1 putative 50S ribosomal protein L31 2266257 rpmE2 12331486 rpmE2 Staphylococcus aureus subsp. aureus str. JKD6008 putative 50S ribosomal protein L31 YP_005745492.1 2266003 R 546342 CDS YP_005745493.1 384862773 12331487 complement(2266375..2267691) 1 NC_017341.1 putative methicillin resistance expression factor 2267691 rho 12331487 rho Staphylococcus aureus subsp. aureus str. JKD6008 putative methicillin resistance expression factor YP_005745493.1 2266375 R 546342 CDS YP_005745494.1 384862774 12331488 complement(2267938..2269365) 1 NC_017341.1 aldehyde dehydrogenase family protein 2269365 aldA 12331488 aldA Staphylococcus aureus subsp. aureus str. JKD6008 aldehyde dehydrogenase family protein YP_005745494.1 2267938 R 546342 CDS YP_005745495.1 384862775 12331489 complement(2269603..2269938) 1 NC_017341.1 contains HxlR-like helix-turn-helix N-terminal domain; putative transcriptional regulator 2269938 12331489 SAA6008_02161 Staphylococcus aureus subsp. aureus str. JKD6008 putative transcriptional regulator YP_005745495.1 2269603 R 546342 CDS YP_005745496.1 384862776 12331490 complement(2270027..2271286) 1 NC_017341.1 putative UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2271286 murZ 12331490 murZ Staphylococcus aureus subsp. aureus str. JKD6008 putative UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_005745496.1 2270027 R 546342 CDS YP_005745497.1 384862777 12331491 complement(2271752..2272612) 1 NC_017341.1 putative tagatose-bisphosphate aldolase 2272612 fbaA 12331491 fbaA Staphylococcus aureus subsp. aureus str. JKD6008 putative tagatose-bisphosphate aldolase YP_005745497.1 2271752 R 546342 CDS YP_005745498.1 384862778 12331492 2272830..2273351 1 NC_017341.1 hypothetical protein 2273351 12331492 SAA6008_02164 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745498.1 2272830 D 546342 CDS YP_005745499.1 384862779 12331493 complement(2273460..2275070) 1 NC_017341.1 putative CTP synthase 2275070 ctrA 12331493 ctrA Staphylococcus aureus subsp. aureus str. JKD6008 putative CTP synthase YP_005745499.1 2273460 R 546342 CDS YP_005745500.1 384862780 12331494 complement(2275406..2275936) 1 NC_017341.1 participates in both the initiation and recycling phases of transcription; in the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis b; DNA-directed RNA polymerase subunit delta 2275936 rpoE 12331494 rpoE Staphylococcus aureus subsp. aureus str. JKD6008 DNA-directed RNA polymerase subunit delta YP_005745500.1 2275406 R 546342 CDS YP_005745501.1 384862781 12331495 complement(2276048..2276908) 1 NC_017341.1 PFAM: GCN5-related N-acetyltransferase KEGG: sav:SAV2129 similar to spermine/spermidine acetyltransferase blt; acetyltransferase 2276908 12331495 SAA6008_02167 Staphylococcus aureus subsp. aureus str. JKD6008 acetyltransferase YP_005745501.1 2276048 R 546342 CDS YP_005745502.1 384862782 12331496 2277332..2278135 1 NC_017341.1 catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type II pantothenate kinases are not regulated by feedback inhibition by coenzyme A; pantothenate kinase 2278135 panK 12331496 panK Staphylococcus aureus subsp. aureus str. JKD6008 pantothenate kinase YP_005745502.1 2277332 D 546342 CDS YP_005745503.1 384862783 12331498 complement(2279336..2280529) 1 NC_017341.1 hypothetical protein 2280529 12331498 SAA6008_02171 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745503.1 2279336 R 546342 CDS YP_005745504.1 384862784 12331499 complement(2280529..2281713) 1 NC_017341.1 peptidase, M20/M25/M40 family 2281713 hmrA 12331499 hmrA Staphylococcus aureus subsp. aureus str. JKD6008 peptidase, M20/M25/M40 family YP_005745504.1 2280529 R 546342 CDS YP_005745505.1 384862785 12331500 2282024..2282494 1 NC_017341.1 autoinducer-2 production protein LuxS 2282494 luxS 12331500 luxS Staphylococcus aureus subsp. aureus str. JKD6008 autoinducer-2 production protein LuxS YP_005745505.1 2282024 D 546342 CDS YP_005745506.1 384862786 12331501 complement(2283010..2284311) 1 NC_017341.1 putative pyrimidine-nucleoside phosphorylase 2284311 pdp 12331501 pdp Staphylococcus aureus subsp. aureus str. JKD6008 putative pyrimidine-nucleoside phosphorylase YP_005745506.1 2283010 R 546342 CDS YP_005745507.1 384862787 12331502 2284295..2284423 1 NC_017341.1 hypothetical protein 2284423 12331502 SAA6008_02175 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745507.1 2284295 D 546342 CDS YP_005745508.1 384862788 12331503 complement(2284590..2285252) 1 NC_017341.1 putative deoxyribose-phosphate aldolase 2285252 deoC2 12331503 deoC2 Staphylococcus aureus subsp. aureus str. JKD6008 putative deoxyribose-phosphate aldolase YP_005745508.1 2284590 R 546342 CDS YP_005745509.1 384862789 12331504 2285567..2286277 1 NC_017341.1 putative purine nucleoside phosphorylase 2286277 deoD 12331504 deoD Staphylococcus aureus subsp. aureus str. JKD6008 putative purine nucleoside phosphorylase YP_005745509.1 2285567 D 546342 CDS YP_005745510.1 384862790 12331505 complement(2286398..2286841) 1 NC_017341.1 putative non-heme iron-containing ferritin 2286841 dps 12331505 dps Staphylococcus aureus subsp. aureus str. JKD6008 putative non-heme iron-containing ferritin YP_005745510.1 2286398 R 546342 CDS YP_005745511.1 384862791 12331506 complement(2287041..2287454) 1 NC_017341.1 putative thiol-disulfide oxidoreductase, DCC family 2287454 12331506 SAA6008_02179 Staphylococcus aureus subsp. aureus str. JKD6008 putative thiol-disulfide oxidoreductase, DCC family YP_005745511.1 2287041 R 546342 CDS YP_005745512.1 384862792 12331507 complement(2287912..2289285) 1 NC_017341.1 hypothetical protein 2289285 12331507 SAA6008_02180 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745512.1 2287912 R 546342 CDS YP_005745513.1 384862793 12331508 complement(2289957..2290103) 1 NC_017341.1 hypothetical protein 2290103 12331508 SAA6008_02181 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745513.1 2289957 R 546342 CDS YP_005745514.1 384862794 12331509 complement(2290218..2291156) 1 NC_017341.1 TIGRFAM: mannose-6-phosphate isomerase, class I PFAM: mannose-6-phosphate isomerase type I KEGG: saa:SAUSA300_2096 mannose-6-phosphate isomerase; mannose-6 phosphate isomerase pmi 2291156 manA1 12331509 manA1 Staphylococcus aureus subsp. aureus str. JKD6008 mannose-6 phosphate isomerase pmi YP_005745514.1 2290218 R 546342 CDS YP_005745515.1 384862795 12331510 complement(2291591..2292256) 1 NC_017341.1 putative NAD dependent epimerase 2292256 12331510 SAA6008_02183 Staphylococcus aureus subsp. aureus str. JKD6008 putative NAD dependent epimerase YP_005745515.1 2291591 R 546342 CDS YP_005745516.1 384862796 12331511 2292408..2292728 1 NC_017341.1 zinc and cobalt transport repressor protein 2292728 czrA 12331511 czrA Staphylococcus aureus subsp. aureus str. JKD6008 zinc and cobalt transport repressor protein YP_005745516.1 2292408 D 546342 CDS YP_005745517.1 384862797 12331512 2292730..2293710 1 NC_017341.1 cation diffusion facilitator family transporter 2293710 czrB 12331512 czrB Staphylococcus aureus subsp. aureus str. JKD6008 cation diffusion facilitator family transporter YP_005745517.1 2292730 D 546342 CDS YP_005745518.1 384862798 12331513 2293976..2295067 1 NC_017341.1 lytic regulatory protein 2295067 12331513 SAA6008_02186 Staphylococcus aureus subsp. aureus str. JKD6008 lytic regulatory protein YP_005745518.1 2293976 D 546342 CDS YP_005745519.1 384862799 12331514 complement(2296096..2296299) 1 NC_017341.1 truncated resolvase 2296299 12331514 SAA6008_02187 Staphylococcus aureus subsp. aureus str. JKD6008 truncated resolvase YP_005745519.1 2296096 R 546342 CDS YP_005745520.1 384862800 12331515 complement(2296358..2297494) 1 NC_017341.1 SAP domain-containing protein 2297494 12331515 SAA6008_02188 Staphylococcus aureus subsp. aureus str. JKD6008 SAP domain-containing protein YP_005745520.1 2296358 R 546342 CDS YP_005745521.1 384862801 12331516 complement(2298580..2299437) 1 NC_017341.1 haloacid dehalogenase-like hydrolase 2299437 12331516 SAA6008_02189 Staphylococcus aureus subsp. aureus str. JKD6008 haloacid dehalogenase-like hydrolase YP_005745521.1 2298580 R 546342 CDS YP_005745522.1 384862802 12331517 complement(2299505..2300287) 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, ABC protein 2300287 12331517 SAA6008_02190 Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, ABC protein YP_005745522.1 2299505 R 546342 CDS YP_005745523.1 384862803 12331518 complement(2300519..2302342) 1 NC_017341.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6Pusing glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 2302342 glmS 12331518 glmS Staphylococcus aureus subsp. aureus str. JKD6008 glucosamine--fructose-6-phosphate aminotransferase YP_005745523.1 2300519 R 546342 CDS YP_005745524.1 384862804 12331519 2303005..2304543 1 NC_017341.1 TIGRFAM: PTS system, mannitol-specific IIC subunit PFAM: phosphotransferase system EIIC; phosphotransferase system lactose/cellobiose-specific IIB subunit KEGG: sao:SAOUHSC_02400 PTS system, mannitol-specific component, putative; PTS system mannitol-specific IIBC component 2304543 mtlA 12331519 mtlA Staphylococcus aureus subsp. aureus str. JKD6008 PTS system mannitol-specific IIBC component YP_005745524.1 2303005 D 546342 CDS YP_005745525.1 384862805 12331520 2304578..2306710 1 NC_017341.1 transcriptional antiterminator, BglG family/DNA-binding protein 2306710 bglG 12331520 bglG Staphylococcus aureus subsp. aureus str. JKD6008 transcriptional antiterminator, BglG family/DNA-binding protein YP_005745525.1 2304578 D 546342 CDS YP_005745526.1 384862806 12331521 2306722..2307156 1 NC_017341.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 KEGG: sao:SAOUHSC_02402 PTS system, mannitol-specific IIa component, putative; phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2, MtlA_1 2307156 mtlA_1 12331521 mtlA_1 Staphylococcus aureus subsp. aureus str. JKD6008 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2, MtlA_1 YP_005745526.1 2306722 D 546342 CDS YP_005745527.1 384862807 12331522 2307156..2308262 1 NC_017341.1 putative mannitol-1-phosphate 5-dehydrogenase 2308262 mtlD 12331522 mtlD Staphylococcus aureus subsp. aureus str. JKD6008 putative mannitol-1-phosphate 5-dehydrogenase YP_005745527.1 2307156 D 546342 CDS YP_005745528.1 384862808 12331524 complement(2316296..2317651) 1 NC_017341.1 putative phosphoglucosamine mutase 2317651 glmM 12331524 glmM Staphylococcus aureus subsp. aureus str. JKD6008 putative phosphoglucosamine mutase YP_005745528.1 2316296 R 546342 CDS YP_005745529.1 384862809 12331525 complement(2317678..2318610) 1 NC_017341.1 hypothetical protein 2318610 12331525 SAA6008_02199 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745529.1 2317678 R 546342 CDS YP_005745530.1 384862810 12331526 complement(2318612..2319421) 1 NC_017341.1 checkpoint controller nucleotide-binding protein 2319421 disA 12331526 disA Staphylococcus aureus subsp. aureus str. JKD6008 checkpoint controller nucleotide-binding protein YP_005745530.1 2318612 R 546342 CDS YP_005745531.1 384862811 12331527 complement(2319610..2320518) 1 NC_017341.1 arginase 2320518 arg 12331527 arg Staphylococcus aureus subsp. aureus str. JKD6008 arginase YP_005745531.1 2319610 R 546342 CDS YP_005745532.1 384862812 12331563 complement(2330226..2331290) 1 NC_017341.1 chromosome partitioning ATPase 2331290 12331563 SAA6008_02204 Staphylococcus aureus subsp. aureus str. JKD6008 chromosome partitioning ATPase YP_005745532.1 2330226 R 546342 CDS YP_005745533.1 384862813 12331565 complement(2331438..2332829) 1 NC_017341.1 drug resistance transporter EmrB/QacA subfamily protein 2332829 12331565 SAA6008_02205 Staphylococcus aureus subsp. aureus str. JKD6008 drug resistance transporter EmrB/QacA subfamily protein YP_005745533.1 2331438 R 546342 CDS YP_005745534.1 384862814 12331567 complement(2333202..2333675) 1 NC_017341.1 hypothetical protein 2333675 12331567 SAA6008_02206 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745534.1 2333202 R 546342 CDS YP_005745535.1 384862815 12331569 complement(2333774..2335117) 1 NC_017341.1 major facilitator superfamily transporter 2335117 12331569 SAA6008_02207 Staphylococcus aureus subsp. aureus str. JKD6008 major facilitator superfamily transporter YP_005745535.1 2333774 R 546342 CDS YP_005745536.1 384862816 12331571 complement(2335294..2335977) 1 NC_017341.1 hemolysin III channel protein 2335977 12331571 SAA6008_02208 Staphylococcus aureus subsp. aureus str. JKD6008 hemolysin III channel protein YP_005745536.1 2335294 R 546342 CDS YP_005745537.1 384862817 12331573 complement(2335996..2337183) 1 NC_017341.1 UTP-glucose-1-phosphate uridylyltransferase family protein 2337183 12331573 SAA6008_02209 Staphylococcus aureus subsp. aureus str. JKD6008 UTP-glucose-1-phosphate uridylyltransferase family protein YP_005745537.1 2335996 R 546342 CDS YP_005745538.1 384862818 12331575 complement(2337227..2337742) 1 NC_017341.1 membrane-bound metal-dependent hydrolase 2337742 12331575 SAA6008_02210 Staphylococcus aureus subsp. aureus str. JKD6008 membrane-bound metal-dependent hydrolase YP_005745538.1 2337227 R 546342 CDS YP_005745539.1 384862819 12331577 2337919..2338179 1 NC_017341.1 hypothetical protein 2338179 12331577 SAA6008_02211 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745539.1 2337919 D 546342 CDS YP_005745540.1 384862820 12331578 complement(2338311..2339681) 1 NC_017341.1 contains a nucleoside recognition domain; hypothetical protein 2339681 12331578 SAA6008_02212 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745540.1 2338311 R 546342 CDS YP_005745541.1 384862821 12331579 complement(2339917..2340795) 1 NC_017341.1 iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane protein 2340795 htsC 12331579 htsC Staphylococcus aureus subsp. aureus str. JKD6008 iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane protein YP_005745541.1 2339917 R 546342 CDS YP_005745542.1 384862822 12331580 complement(2340882..2341799) 1 NC_017341.1 iron transport family protein 2341799 12331580 SAA6008_02214 Staphylococcus aureus subsp. aureus str. JKD6008 iron transport family protein YP_005745542.1 2340882 R 546342 CDS YP_005745543.1 384862823 12331581 complement(2341925..2342908) 1 NC_017341.1 PFAM: periplasmic binding protein KEGG: sao:SAOUHSC_02430 ABC transporter periplasmic binding protein, putative; iron-dicitrate transporter substrate-binding subunit, FecB 2342908 fecB 12331581 fecB Staphylococcus aureus subsp. aureus str. JKD6008 iron-dicitrate transporter substrate-binding subunit, FecB YP_005745543.1 2341925 R 546342 CDS YP_005745544.1 384862824 12331582 complement(2343300..2344370) 1 NC_017341.1 alanine racemase 2344370 12331582 SAA6008_02216 Staphylococcus aureus subsp. aureus str. JKD6008 alanine racemase YP_005745544.1 2343300 R 546342 CDS YP_005745545.1 384862825 12331583 complement(2344377..2346134) 1 NC_017341.1 PFAM: IucA/IucC family protein KEGG: sao:SAOUHSC_02434 hypothetical protein; aerobactin biosynthesis protein, IucA/IucC family 2346134 12331583 SAA6008_02217 Staphylococcus aureus subsp. aureus str. JKD6008 aerobactin biosynthesis protein, IucA/IucC family YP_005745545.1 2344377 R 546342 CDS YP_005745546.1 384862826 12331584 complement(2346121..2347158) 1 NC_017341.1 major facilitator superfamily transporter 2347158 12331584 SAA6008_02218 Staphylococcus aureus subsp. aureus str. JKD6008 major facilitator superfamily transporter YP_005745546.1 2346121 R 546342 CDS YP_005745547.1 384862827 12331585 2347416..2349392 1 NC_017341.1 aerobactin biosynthesis protein, IucA/IucC family 2349392 12331585 SAA6008_02219 Staphylococcus aureus subsp. aureus str. JKD6008 aerobactin biosynthesis protein, IucA/IucC family YP_005745547.1 2347416 D 546342 CDS YP_005745548.1 384862828 12331586 2349848..2350648 1 NC_017341.1 truncated transposase for IS1272 2350648 12331586 SAA6008_02220 Staphylococcus aureus subsp. aureus str. JKD6008 truncated transposase for IS1272 YP_005745548.1 2349848 D 546342 CDS YP_005745549.1 384862829 12331587 2350645..2350965 1 NC_017341.1 truncated transposase for IS1272 2350965 12331587 SAA6008_02221 Staphylococcus aureus subsp. aureus str. JKD6008 truncated transposase for IS1272 YP_005745549.1 2350645 D 546342 CDS YP_005745550.1 384862830 12331588 2351128..2351472 1 NC_017341.1 putative transposase for IS1272 2351472 12331588 SAA6008_02222 Staphylococcus aureus subsp. aureus str. JKD6008 putative transposase for IS1272 YP_005745550.1 2351128 D 546342 CDS YP_005745551.1 384862831 12331589 complement(2351508..2352017) 1 NC_017341.1 hypothetical protein 2352017 12331589 SAA6008_02223 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745551.1 2351508 R 546342 CDS YP_005745552.1 384862832 12331590 complement(2352080..2352319) 1 NC_017341.1 small integral membrane protein 2352319 12331590 SAA6008_02224 Staphylococcus aureus subsp. aureus str. JKD6008 small integral membrane protein YP_005745552.1 2352080 R 546342 CDS YP_005745553.1 384862833 12331591 complement(2352332..2352868) 1 NC_017341.1 hypothetical protein 2352868 12331591 SAA6008_02225 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745553.1 2352332 R 546342 CDS YP_005745554.1 384862834 12331592 complement(2353043..2354605) 1 NC_017341.1 choline transport protein BetT 2354605 betT 12331592 betT Staphylococcus aureus subsp. aureus str. JKD6008 choline transport protein BetT YP_005745554.1 2353043 R 546342 CDS YP_005745555.1 384862835 12331593 complement(2354912..2355913) 1 NC_017341.1 Alcohol dehydrogenase zinc-binding type 1 2355913 12331593 SAA6008_02227 Staphylococcus aureus subsp. aureus str. JKD6008 Alcohol dehydrogenase zinc-binding type 1 YP_005745555.1 2354912 R 546342 CDS YP_005745556.1 384862836 12331594 complement(2356147..2357148) 1 NC_017341.1 putative NADP-dependent zinc-binding dehydrogenase 2357148 12331594 SAA6008_02228 Staphylococcus aureus subsp. aureus str. JKD6008 putative NADP-dependent zinc-binding dehydrogenase YP_005745556.1 2356147 R 546342 CDS YP_005745557.1 384862837 12331595 complement(2357431..2358300) 1 NC_017341.1 alpha/beta cell surface hydrolase 2358300 12331595 SAA6008_02229 Staphylococcus aureus subsp. aureus str. JKD6008 alpha/beta cell surface hydrolase YP_005745557.1 2357431 R 546342 CDS YP_005745558.1 384862838 12331596 complement(2358566..2359978) 1 NC_017341.1 6-phospho-beta-galactosidase 2359978 lacG 12331596 lacG Staphylococcus aureus subsp. aureus str. JKD6008 6-phospho-beta-galactosidase YP_005745558.1 2358566 R 546342 CDS YP_005745559.1 384862839 12331597 complement(2359996..2361708) 1 NC_017341.1 PTS system lactose/cellobiose-specific IIBC component 2361708 12331597 SAA6008_02231 Staphylococcus aureus subsp. aureus str. JKD6008 PTS system lactose/cellobiose-specific IIBC component YP_005745559.1 2359996 R 546342 CDS YP_005745560.1 384862840 12331598 complement(2361714..2362025) 1 NC_017341.1 PTS system lactose/cellobiose-specific IIA component 2362025 12331598 SAA6008_02232 Staphylococcus aureus subsp. aureus str. JKD6008 PTS system lactose/cellobiose-specific IIA component YP_005745560.1 2361714 R 546342 CDS YP_005745561.1 384862841 12331599 complement(2362047..2363027) 1 NC_017341.1 tagatose 1,6-diphosphate aldolase 2363027 lacD 12331599 lacD Staphylococcus aureus subsp. aureus str. JKD6008 tagatose 1,6-diphosphate aldolase YP_005745561.1 2362047 R 546342 CDS YP_005745562.1 384862842 12331600 complement(2363031..2363963) 1 NC_017341.1 tagatose-6-phosphate kinase 2363963 lacC 12331600 lacC Staphylococcus aureus subsp. aureus str. JKD6008 tagatose-6-phosphate kinase YP_005745562.1 2363031 R 546342 CDS YP_005745563.1 384862843 12331601 complement(2363976..2364491) 1 NC_017341.1 galactose-6-phosphate isomerase LacB subunit 2364491 lacB 12331601 lacB Staphylococcus aureus subsp. aureus str. JKD6008 galactose-6-phosphate isomerase LacB subunit YP_005745563.1 2363976 R 546342 CDS YP_005745564.1 384862844 12331602 complement(2364507..2364935) 1 NC_017341.1 galactose-6-phosphate isomerase subunit LacA 2364935 lacA 12331602 lacA Staphylococcus aureus subsp. aureus str. JKD6008 galactose-6-phosphate isomerase subunit LacA YP_005745564.1 2364507 R 546342 CDS YP_005745565.1 384862845 12331603 complement(2365303..2366058) 1 NC_017341.1 deoR-family regulatory protein 2366058 deoR 12331603 deoR Staphylococcus aureus subsp. aureus str. JKD6008 deoR-family regulatory protein YP_005745565.1 2365303 R 546342 CDS YP_005745566.1 384862846 12331604 2366309..2367040 1 NC_017341.1 NAD-dependent deacetylase 2367040 12331604 SAA6008_02238 Staphylococcus aureus subsp. aureus str. JKD6008 NAD-dependent deacetylase YP_005745566.1 2366309 D 546342 CDS YP_005745567.1 384862847 12331605 complement(2367331..2367939) 1 NC_017341.1 hypothetical protein 2367939 12331605 SAA6008_02239 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745567.1 2367331 R 546342 CDS YP_005745568.1 384862848 12331606 complement(2368546..2369394) 1 NC_017341.1 PFAM: aldo/keto reductase KEGG: sao:SAOUHSC_02460 hypothetical protein; oxidoreductase, aldo/keto reductase 2369394 12331606 SAA6008_02240 Staphylococcus aureus subsp. aureus str. JKD6008 oxidoreductase, aldo/keto reductase YP_005745568.1 2368546 R 546342 CDS YP_005745569.1 384862849 12331607 complement(2369464..2369880) 1 NC_017341.1 MerR family transcriptional regulator 2369880 12331607 SAA6008_02241 Staphylococcus aureus subsp. aureus str. JKD6008 MerR family transcriptional regulator YP_005745569.1 2369464 R 546342 CDS YP_005745570.1 384862850 12331608 2370139..2370291 1 NC_017341.1 hypothetical protein 2370291 12331608 SAA6008_02242 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745570.1 2370139 D 546342 CDS YP_005745571.1 384862851 12331609 2370288..2372711 1 NC_017341.1 PFAM: polysaccharide lyase family 8; polysaccharide lyase family 8 domain protein; polysaccharide lyase 8 alpha-helical KEGG: sav:SAV2202 hyaluronate lyase precursor; hyaluronate lyase 2 2372711 hysA 12331609 hysA Staphylococcus aureus subsp. aureus str. JKD6008 hyaluronate lyase 2 YP_005745571.1 2370288 D 546342 CDS YP_005745572.1 384862852 12331610 complement(2372771..2373625) 1 NC_017341.1 membrane-bound metalloendopeptidase 2373625 12331610 SAA6008_02244 Staphylococcus aureus subsp. aureus str. JKD6008 membrane-bound metalloendopeptidase YP_005745572.1 2372771 R 546342 CDS YP_005745573.1 384862853 12331611 complement(2373836..2374651) 1 NC_017341.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIB PFAM: sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase type 3 KEGG: sav:SAV2204 hypothetical protein; putative hydrolase 2374651 12331611 SAA6008_02245 Staphylococcus aureus subsp. aureus str. JKD6008 putative hydrolase YP_005745573.1 2373836 R 546342 CDS YP_005745574.1 384862854 12331612 2374945..2375370 1 NC_017341.1 truncated MHC class II analog protein 2375370 12331612 SAA6008_02246 Staphylococcus aureus subsp. aureus str. JKD6008 truncated MHC class II analog protein YP_005745574.1 2374945 D 546342 CDS YP_005745575.1 384862855 12331613 complement(2375734..2376438) 1 NC_017341.1 alpha-acetolactate decarboxylase 2376438 budA1 12331613 budA1 Staphylococcus aureus subsp. aureus str. JKD6008 alpha-acetolactate decarboxylase YP_005745575.1 2375734 R 546342 CDS YP_005745576.1 384862856 12331614 complement(2376475..2378139) 1 NC_017341.1 putative acetolactate synthase 2378139 alsS 12331614 alsS Staphylococcus aureus subsp. aureus str. JKD6008 putative acetolactate synthase YP_005745576.1 2376475 R 546342 CDS YP_005745577.1 384862857 12331615 complement(2379391..2380680) 1 NC_017341.1 hypothetical protein 2380680 12331615 SAA6008_02249 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745577.1 2379391 R 546342 CDS YP_005745578.1 384862858 12331616 complement(2380863..2381999) 1 NC_017341.1 AAA domain protein 2381999 clpA 12331616 clpA Staphylococcus aureus subsp. aureus str. JKD6008 AAA domain protein YP_005745578.1 2380863 R 546342 CDS YP_005745579.1 384862859 12331617 complement(2382000..2382743) 1 NC_017341.1 hypothetical protein 2382743 12331617 SAA6008_02251 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745579.1 2382000 R 546342 CDS YP_005745580.1 384862860 12331619 complement(2383094..2384191) 1 NC_017341.1 possible gene remnant, similar to C-term helicase.; hypothetical protein 2384191 12331619 SAA6008_02253 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745580.1 2383094 R 546342 CDS YP_005745581.1 384862861 12331620 complement(2384736..2385134) 1 NC_017341.1 30S ribosomal protein S9 2385134 rpsI 12331620 rpsI Staphylococcus aureus subsp. aureus str. JKD6008 30S ribosomal protein S9 YP_005745581.1 2384736 R 546342 CDS YP_005745582.1 384862862 12331621 complement(2385148..2385585) 1 NC_017341.1 50S ribosomal protein L13 2385585 rplM 12331621 rplM Staphylococcus aureus subsp. aureus str. JKD6008 50S ribosomal protein L13 YP_005745582.1 2385148 R 546342 CDS YP_005745583.1 384862863 12331622 complement(2385825..2386628) 1 NC_017341.1 putative tRNA pseudouridine synthase 2386628 truA 12331622 truA Staphylococcus aureus subsp. aureus str. JKD6008 putative tRNA pseudouridine synthase YP_005745583.1 2385825 R 546342 CDS YP_005745584.1 384862864 12331623 complement(2386633..2387439) 1 NC_017341.1 cobalt (Co2+) ABC superfamily ATP binding cassette transporter, membrane protein 2387439 12331623 SAA6008_02257 Staphylococcus aureus subsp. aureus str. JKD6008 cobalt (Co2+) ABC superfamily ATP binding cassette transporter, membrane protein YP_005745584.1 2386633 R 546342 CDS YP_005745585.1 384862865 12331624 complement(2387429..2388289) 1 NC_017341.1 PFAM: ABC transporter related SMART: AAA ATPase KEGG: ABC transporter, ATP-binding protein, putative; cobalt transporter ATP-binding subunit 2388289 cbiO_1 12331624 cbiO_1 Staphylococcus aureus subsp. aureus str. JKD6008 cobalt transporter ATP-binding subunit YP_005745585.1 2387429 R 546342 CDS YP_005745586.1 384862866 12331625 complement(2388286..2389095) 1 NC_017341.1 cobalt transporter ATP-binding subunit 2389095 cbiO 12331625 cbiO Staphylococcus aureus subsp. aureus str. JKD6008 cobalt transporter ATP-binding subunit YP_005745586.1 2388286 R 546342 CDS YP_005745587.1 384862867 12331626 complement(2389633..2390001) 1 NC_017341.1 50S ribosomal protein L17 2390001 rplQ 12331626 rplQ Staphylococcus aureus subsp. aureus str. JKD6008 50S ribosomal protein L17 YP_005745587.1 2389633 R 546342 CDS YP_005745588.1 384862868 12331627 complement(2390018..2390962) 1 NC_017341.1 DNA-directed RNA polymerase subunit alpha 2390962 rpoA 12331627 rpoA Staphylococcus aureus subsp. aureus str. JKD6008 DNA-directed RNA polymerase subunit alpha YP_005745588.1 2390018 R 546342 CDS YP_005745589.1 384862869 12331628 complement(2391037..2391426) 1 NC_017341.1 30S ribosomal protein S11 2391426 rpsK 12331628 rpsK Staphylococcus aureus subsp. aureus str. JKD6008 30S ribosomal protein S11 YP_005745589.1 2391037 R 546342 CDS YP_005745590.1 384862870 12331629 complement(2391450..2391815) 1 NC_017341.1 30S ribosomal protein S13 2391815 rpsM 12331629 rpsM Staphylococcus aureus subsp. aureus str. JKD6008 30S ribosomal protein S13 YP_005745590.1 2391450 R 546342 CDS YP_005745591.1 384862871 12331630 complement(2391838..2391951) 1 NC_017341.1 50S ribosomal protein L36 2391951 rpmJ 12331630 rpmJ Staphylococcus aureus subsp. aureus str. JKD6008 50S ribosomal protein L36 YP_005745591.1 2391838 R 546342 CDS YP_005745592.1 384862872 12331631 complement(2391983..2392201) 1 NC_017341.1 translation initiation factor IF-1 2392201 infA 12331631 infA Staphylococcus aureus subsp. aureus str. JKD6008 translation initiation factor IF-1 YP_005745592.1 2391983 R 546342 CDS YP_005745593.1 384862873 12331632 complement(2392394..2393041) 1 NC_017341.1 Nucleoside-triphosphate--adenylate kinase 2393041 adk 12331632 adk Staphylococcus aureus subsp. aureus str. JKD6008 Nucleoside-triphosphate--adenylate kinase YP_005745593.1 2392394 R 546342 CDS YP_005745594.1 384862874 12331633 complement(2393058..2394335) 1 NC_017341.1 identified by match to protein family HMM PF00344; match to protein family HMM TIGR00967; Sec family Type I general secretory pathway preprotein translocase SecY_1 2394335 secY_1 12331633 secY_1 Staphylococcus aureus subsp. aureus str. JKD6008 Sec family Type I general secretory pathway preprotein translocase SecY_1 YP_005745594.1 2393058 R 546342 CDS YP_005745595.1 384862875 12331634 complement(2394350..2394790) 1 NC_017341.1 50S ribosomal protein L15 2394790 rplO 12331634 rplO Staphylococcus aureus subsp. aureus str. JKD6008 50S ribosomal protein L15 YP_005745595.1 2394350 R 546342 CDS YP_005745596.1 384862876 12331635 complement(2394807..2394986) 1 NC_017341.1 50S ribosomal protein L30 2394986 rpmD 12331635 rpmD Staphylococcus aureus subsp. aureus str. JKD6008 50S ribosomal protein L30 YP_005745596.1 2394807 R 546342 CDS YP_005745597.1 384862877 12331636 complement(2395003..2395503) 1 NC_017341.1 30S ribosomal protein S5 2395503 rpsE 12331636 rpsE Staphylococcus aureus subsp. aureus str. JKD6008 30S ribosomal protein S5 YP_005745597.1 2395003 R 546342 CDS YP_005745598.1 384862878 12331637 complement(2395524..2395883) 1 NC_017341.1 50S ribosomal protein L18 2395883 rplR 12331637 rplR Staphylococcus aureus subsp. aureus str. JKD6008 50S ribosomal protein L18 YP_005745598.1 2395524 R 546342 CDS YP_005745599.1 384862879 12331638 complement(2395914..2396450) 1 NC_017341.1 50S ribosomal protein L6 2396450 rplF 12331638 rplF Staphylococcus aureus subsp. aureus str. JKD6008 50S ribosomal protein L6 YP_005745599.1 2395914 R 546342 CDS YP_005745600.1 384862880 12331639 complement(2396475..2396873) 1 NC_017341.1 30S ribosomal protein S8 2396873 rpsH 12331639 rpsH Staphylococcus aureus subsp. aureus str. JKD6008 30S ribosomal protein S8 YP_005745600.1 2396475 R 546342 CDS YP_005745601.1 384862881 12331640 complement(2396905..2397090) 1 NC_017341.1 30S ribosomal protein S14 2397090 rpsN_2 12331640 rpsN_2 Staphylococcus aureus subsp. aureus str. JKD6008 30S ribosomal protein S14 YP_005745601.1 2396905 R 546342 CDS YP_005745602.1 384862882 12331641 complement(2397113..2397652) 1 NC_017341.1 50S ribosomal protein L5 2397652 rplE 12331641 rplE Staphylococcus aureus subsp. aureus str. JKD6008 50S ribosomal protein L5 YP_005745602.1 2397113 R 546342 CDS YP_005745603.1 384862883 12331642 complement(2397679..2397996) 1 NC_017341.1 50S ribosomal protein L24 2397996 rplX 12331642 rplX Staphylococcus aureus subsp. aureus str. JKD6008 50S ribosomal protein L24 YP_005745603.1 2397679 R 546342 CDS YP_005745604.1 384862884 12331643 complement(2398032..2398400) 1 NC_017341.1 50S ribosomal protein L14 2398400 rplN 12331643 rplN Staphylococcus aureus subsp. aureus str. JKD6008 50S ribosomal protein L14 YP_005745604.1 2398032 R 546342 CDS YP_005745605.1 384862885 12331644 complement(2398432..2398695) 1 NC_017341.1 30S ribosomal protein S17 2398695 rpsQ 12331644 rpsQ Staphylococcus aureus subsp. aureus str. JKD6008 30S ribosomal protein S17 YP_005745605.1 2398432 R 546342 CDS YP_005745606.1 384862886 12331645 complement(2398719..2398928) 1 NC_017341.1 50S ribosomal protein L29 2398928 rpmC 12331645 rpmC Staphylococcus aureus subsp. aureus str. JKD6008 50S ribosomal protein L29 YP_005745606.1 2398719 R 546342 CDS YP_005745607.1 384862887 12331646 complement(2398918..2399352) 1 NC_017341.1 50S ribosomal protein L16 2399352 rplP 12331646 rplP Staphylococcus aureus subsp. aureus str. JKD6008 50S ribosomal protein L16 YP_005745607.1 2398918 R 546342 CDS YP_005745608.1 384862888 12331647 complement(2399355..2400008) 1 NC_017341.1 30S ribosomal protein S3 2400008 rpsC 12331647 rpsC Staphylococcus aureus subsp. aureus str. JKD6008 30S ribosomal protein S3 YP_005745608.1 2399355 R 546342 CDS YP_005745609.1 384862889 12331648 complement(2400032..2400385) 1 NC_017341.1 50S ribosomal protein L22 2400385 rplV 12331648 rplV Staphylococcus aureus subsp. aureus str. JKD6008 50S ribosomal protein L22 YP_005745609.1 2400032 R 546342 CDS YP_005745610.1 384862890 12331649 complement(2400414..2400692) 1 NC_017341.1 30S ribosomal protein S19 2400692 rpsS 12331649 rpsS Staphylococcus aureus subsp. aureus str. JKD6008 30S ribosomal protein S19 YP_005745610.1 2400414 R 546342 CDS YP_005745611.1 384862891 12331650 complement(2400759..2401592) 1 NC_017341.1 50S ribosomal protein L2 2401592 rplB 12331650 rplB Staphylococcus aureus subsp. aureus str. JKD6008 50S ribosomal protein L2 YP_005745611.1 2400759 R 546342 CDS YP_005745612.1 384862892 12331651 complement(2401625..2401900) 1 NC_017341.1 50S ribosomal protein L23 2401900 rplW 12331651 rplW Staphylococcus aureus subsp. aureus str. JKD6008 50S ribosomal protein L23 YP_005745612.1 2401625 R 546342 CDS YP_005745613.1 384862893 12331652 complement(2401900..2402523) 1 NC_017341.1 50S ribosomal protein L4 2402523 rplD 12331652 rplD Staphylococcus aureus subsp. aureus str. JKD6008 50S ribosomal protein L4 YP_005745613.1 2401900 R 546342 CDS YP_005745614.1 384862894 12331653 complement(2402550..2403212) 1 NC_017341.1 50S ribosomal protein L3 2403212 rplC 12331653 rplC Staphylococcus aureus subsp. aureus str. JKD6008 50S ribosomal protein L3 YP_005745614.1 2402550 R 546342 CDS YP_005745615.1 384862895 12331654 complement(2403240..2403548) 1 NC_017341.1 30S ribosomal protein S10 2403548 rpsJ 12331654 rpsJ Staphylococcus aureus subsp. aureus str. JKD6008 30S ribosomal protein S10 YP_005745615.1 2403240 R 546342 CDS YP_005745616.1 384862896 12331655 2403905..2404294 1 NC_017341.1 hypothetical protein 2404294 12331655 SAA6008_02289 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745616.1 2403905 D 546342 CDS YP_005745617.1 384862897 12331656 complement(2404486..2405820) 1 NC_017341.1 xanthine/uracil permeases family protein 2405820 12331656 SAA6008_02290 Staphylococcus aureus subsp. aureus str. JKD6008 xanthine/uracil permeases family protein YP_005745617.1 2404486 R 546342 CDS YP_005745618.1 384862898 12331657 complement(2405933..2408068) 1 NC_017341.1 putative DNA topoisomerase 2408068 topB 12331657 topB Staphylococcus aureus subsp. aureus str. JKD6008 putative DNA topoisomerase YP_005745618.1 2405933 R 546342 CDS YP_005745619.1 384862899 12331658 2408255..2409142 1 NC_017341.1 acetyltransferase (GNAT) family protein 2409142 12331658 SAA6008_02292 Staphylococcus aureus subsp. aureus str. JKD6008 acetyltransferase (GNAT) family protein YP_005745619.1 2408255 D 546342 CDS YP_005745620.1 384862900 12331659 2409323..2410186 1 NC_017341.1 DMT superfamily drug/metabolite transporter 2410186 glcU 12331659 glcU Staphylococcus aureus subsp. aureus str. JKD6008 DMT superfamily drug/metabolite transporter YP_005745620.1 2409323 D 546342 CDS YP_005745621.1 384862901 12331660 complement(2410303..2410434) 1 NC_017341.1 hypothetical protein 2410434 12331660 SAA6008_02294 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745621.1 2410303 R 546342 CDS YP_005745622.1 384862902 12331661 complement(2410605..2411531) 1 NC_017341.1 AEC family malonate efflux carrier 2411531 12331661 SAA6008_02295 Staphylococcus aureus subsp. aureus str. JKD6008 AEC family malonate efflux carrier YP_005745622.1 2410605 R 546342 CDS YP_005745623.1 384862903 12331662 2411646..2411810 1 NC_017341.1 hypothetical protein 2411810 12331662 SAA6008_02296 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745623.1 2411646 D 546342 CDS YP_005745624.1 384862904 12331663 2412055..2412372 1 NC_017341.1 hypothetical protein 2412372 12331663 SAA6008_02297 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745624.1 2412055 D 546342 CDS YP_005745625.1 384862905 12331664 complement(2412559..2415672) 1 NC_017341.1 RND superfamily resistance-nodulation-cell division acriflavin:proton (H+) antiporter 2415672 12331664 SAA6008_02298 Staphylococcus aureus subsp. aureus str. JKD6008 RND superfamily resistance-nodulation-cell division acriflavin:proton (H+) antiporter YP_005745625.1 2412559 R 546342 CDS YP_005745626.1 384862906 12331665 complement(2415843..2417108) 1 NC_017341.1 this protein is considered a factor influencing the level of methicillin resistance; peptidoglycan pentaglycine interpeptide biosynthetic protein FmhB 2417108 fmhB 12331665 fmhB Staphylococcus aureus subsp. aureus str. JKD6008 peptidoglycan pentaglycine interpeptide biosynthetic protein FmhB YP_005745626.1 2415843 R 546342 CDS YP_005745627.1 384862907 12331666 complement(2417580..2417699) 1 NC_017341.1 hypothetical protein 2417699 12331666 SAA6008_02300 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745627.1 2417580 R 546342 CDS YP_005745628.1 384862908 12331667 complement(2417740..2418504) 1 NC_017341.1 hypothetical protein 2418504 12331667 SAA6008_02301 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745628.1 2417740 R 546342 CDS YP_005745629.1 384862909 12331668 2418666..2419106 1 NC_017341.1 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 2419106 12331668 SAA6008_02302 Staphylococcus aureus subsp. aureus str. JKD6008 MarR family transcriptional regulator YP_005745629.1 2418666 D 546342 CDS YP_005745630.1 384862910 12331669 2419099..2420310 1 NC_017341.1 major facilitator superfamily transporter 2420310 12331669 SAA6008_02303 Staphylococcus aureus subsp. aureus str. JKD6008 major facilitator superfamily transporter YP_005745630.1 2419099 D 546342 CDS YP_005745631.1 384862911 12331670 complement(2420412..2420762) 1 NC_017341.1 staphylococcal accessory regulator family 2420762 sarV 12331670 sarV Staphylococcus aureus subsp. aureus str. JKD6008 staphylococcal accessory regulator family YP_005745631.1 2420412 R 546342 CDS YP_005745632.1 384862912 12331671 complement(2421453..2422382) 1 NC_017341.1 molybdenum cofactor biosynthesis protein A 2422382 12331671 SAA6008_02305 Staphylococcus aureus subsp. aureus str. JKD6008 molybdenum cofactor biosynthesis protein A YP_005745632.1 2421453 R 546342 CDS YP_005745633.1 384862913 12331672 complement(2422495..2423094) 1 NC_017341.1 putative molybdopterin-guanine dinucleotide biosynthesis protein A 2423094 mobA 12331672 mobA Staphylococcus aureus subsp. aureus str. JKD6008 putative molybdopterin-guanine dinucleotide biosynthesis protein A YP_005745633.1 2422495 R 546342 CDS YP_005745634.1 384862914 12331673 complement(2423101..2423334) 1 NC_017341.1 Mmolybdopterin converting factor, subunit 1 2423334 moaD 12331673 moaD Staphylococcus aureus subsp. aureus str. JKD6008 Mmolybdopterin converting factor, subunit 1 YP_005745634.1 2423101 R 546342 CDS YP_005745635.1 384862915 12331674 complement(2423340..2423786) 1 NC_017341.1 PFAM: molybdopterin biosynthesis MoaE protein KEGG: sav:SAV2271 molybdopterin converting factor; Molybdopterin synthase catalytic subunit, MoaE 2423786 moaE 12331674 moaE Staphylococcus aureus subsp. aureus str. JKD6008 Molybdopterin synthase catalytic subunit, MoaE YP_005745635.1 2423340 R 546342 CDS YP_005745636.1 384862916 12331675 complement(2423800..2424285) 1 NC_017341.1 putative molybdopterin-guanine dinucleotide biosynthesis protein B 2424285 mobB 12331675 mobB Staphylococcus aureus subsp. aureus str. JKD6008 putative molybdopterin-guanine dinucleotide biosynthesis protein B YP_005745636.1 2423800 R 546342 CDS YP_005745637.1 384862917 12331676 complement(2424282..2425541) 1 NC_017341.1 molybdopterin biosynthesis protein MoeA 2425541 moeA 12331676 moeA Staphylococcus aureus subsp. aureus str. JKD6008 molybdopterin biosynthesis protein MoeA YP_005745637.1 2424282 R 546342 CDS YP_005745638.1 384862918 12331677 2425604..2426098 1 NC_017341.1 putative molybdenum cofactor biosynthesis protein C 2426098 moaC 12331677 moaC Staphylococcus aureus subsp. aureus str. JKD6008 putative molybdenum cofactor biosynthesis protein C YP_005745638.1 2425604 D 546342 CDS YP_005745639.1 384862919 12331678 complement(2426100..2426606) 1 NC_017341.1 putative molybdenum cofactor biosynthesis protein B 2426606 moaB 12331678 moaB Staphylococcus aureus subsp. aureus str. JKD6008 putative molybdenum cofactor biosynthesis protein B YP_005745639.1 2426100 R 546342 CDS YP_005745640.1 384862920 12331679 complement(2426637..2427641) 1 NC_017341.1 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein 2427641 12331679 SAA6008_02313 Staphylococcus aureus subsp. aureus str. JKD6008 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein YP_005745640.1 2426637 R 546342 CDS YP_005745641.1 384862921 12331680 complement(2427811..2428416) 1 NC_017341.1 molybdenum (Mo2+) ABC superfamily ATP binding cassette transporter, ABC protein 2428416 modC 12331680 modC Staphylococcus aureus subsp. aureus str. JKD6008 molybdenum (Mo2+) ABC superfamily ATP binding cassette transporter, ABC protein YP_005745641.1 2427811 R 546342 CDS YP_005745642.1 384862922 12331681 complement(2428417..2429088) 1 NC_017341.1 molybdenum (Mo2+) ABC superfamily ATP binding cassette transporter, membrane protein 2429088 modB 12331681 modB Staphylococcus aureus subsp. aureus str. JKD6008 molybdenum (Mo2+) ABC superfamily ATP binding cassette transporter, membrane protein YP_005745642.1 2428417 R 546342 CDS YP_005745643.1 384862923 12331682 complement(2429102..2429884) 1 NC_017341.1 molybdenum (Mo2+) ABC superfamily ATP binding cassette transporter, binding protein 2429884 modA 12331682 modA Staphylococcus aureus subsp. aureus str. JKD6008 molybdenum (Mo2+) ABC superfamily ATP binding cassette transporter, binding protein YP_005745643.1 2429102 R 546342 CDS YP_005745644.1 384862924 12331683 2430174..2430971 1 NC_017341.1 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein 2430971 fdhD 12331683 fdhD Staphylococcus aureus subsp. aureus str. JKD6008 formate dehydrogenase accessory protein YP_005745644.1 2430174 D 546342 CDS YP_005745645.1 384862925 12331684 complement(2431143..2431913) 1 NC_017341.1 acetyltransferase (GNAT) family protein 2431913 12331684 SAA6008_02318 Staphylococcus aureus subsp. aureus str. JKD6008 acetyltransferase (GNAT) family protein YP_005745645.1 2431143 R 546342 CDS YP_005745646.1 384862926 12331685 complement(2431985..2432539) 1 NC_017341.1 biotin biosynthesis BioY family protein 2432539 12331685 SAA6008_02319 Staphylococcus aureus subsp. aureus str. JKD6008 biotin biosynthesis BioY family protein YP_005745646.1 2431985 R 546342 CDS YP_005745647.1 384862927 12331686 complement(2432660..2433601) 1 NC_017341.1 inosine-uridine preferring nucleoside hydrolase family protein 2433601 12331686 SAA6008_02320 Staphylococcus aureus subsp. aureus str. JKD6008 inosine-uridine preferring nucleoside hydrolase family protein YP_005745647.1 2432660 R 546342 CDS YP_005745648.1 384862928 12331687 complement(2434000..2434908) 1 NC_017341.1 iron (Fe+3) ABC superfamily ATP binding cassette transporter, binding protein 2434908 fhuD 12331687 fhuD Staphylococcus aureus subsp. aureus str. JKD6008 iron (Fe+3) ABC superfamily ATP binding cassette transporter, binding protein YP_005745648.1 2434000 R 546342 CDS YP_005745649.1 384862929 12331688 complement(2435122..2436276) 1 NC_017341.1 acyl-CoA dehydrogenase 2436276 caiA 12331688 caiA Staphylococcus aureus subsp. aureus str. JKD6008 acyl-CoA dehydrogenase YP_005745649.1 2435122 R 546342 CDS YP_005745650.1 384862930 12331689 complement(2436493..2437398) 1 NC_017341.1 involved in urea transport, promoting its entry into the cell , which can can be advantageous for bacteria as its hydrolysis by urease generates ammonium which is an efficient source of nitrogen and, through its buffering capacity, can also provide resistance to acidic conditions; membrane-bound urea transporter 2437398 utp 12331689 utp Staphylococcus aureus subsp. aureus str. JKD6008 membrane-bound urea transporter YP_005745650.1 2436493 R 546342 CDS YP_005745651.1 384862931 12331690 2437658..2437960 1 NC_017341.1 urease subunit gamma 2437960 ureA 12331690 ureA Staphylococcus aureus subsp. aureus str. JKD6008 urease subunit gamma YP_005745651.1 2437658 D 546342 CDS YP_005745652.1 384862932 12331691 2437974..2438384 1 NC_017341.1 urease subunit beta 2438384 ureB 12331691 ureB Staphylococcus aureus subsp. aureus str. JKD6008 urease subunit beta YP_005745652.1 2437974 D 546342 CDS YP_005745653.1 384862933 12331692 2438393..2440096 1 NC_017341.1 urease subunit alpha 2440096 ureC 12331692 ureC Staphylococcus aureus subsp. aureus str. JKD6008 urease subunit alpha YP_005745653.1 2438393 D 546342 CDS YP_005745654.1 384862934 12331693 2440109..2440561 1 NC_017341.1 urease accessory protein UreE 2440561 ureE 12331693 ureE Staphylococcus aureus subsp. aureus str. JKD6008 urease accessory protein UreE YP_005745654.1 2440109 D 546342 CDS YP_005745655.1 384862935 12331694 2440554..2441243 1 NC_017341.1 urease accessory protein UreF 2441243 ureF 12331694 ureF Staphylococcus aureus subsp. aureus str. JKD6008 urease accessory protein UreF YP_005745655.1 2440554 D 546342 CDS YP_005745656.1 384862936 12331695 2441256..2441870 1 NC_017341.1 urease accessory protein UreG 2441870 ureG 12331695 ureG Staphylococcus aureus subsp. aureus str. JKD6008 urease accessory protein UreG YP_005745656.1 2441256 D 546342 CDS YP_005745657.1 384862937 12331696 2441870..2442706 1 NC_017341.1 urease accessory protein UreD 2442706 12331696 SAA6008_02330 Staphylococcus aureus subsp. aureus str. JKD6008 urease accessory protein UreD YP_005745657.1 2441870 D 546342 CDS YP_005745658.1 384862938 12331697 complement(2442895..2443242) 1 NC_017341.1 TIGRFAM: staphylococcal accessory regulator family KEGG: sao:SAOUHSC_02566 hypothetical protein; staphylococcal accessory regulator R, SarR 2443242 sarR 12331697 sarR Staphylococcus aureus subsp. aureus str. JKD6008 staphylococcal accessory regulator R, SarR YP_005745658.1 2442895 R 546342 CDS YP_005745659.1 384862939 12331698 complement(2443670..2443996) 1 NC_017341.1 hypothetical protein 2443996 12331698 SAA6008_02332 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745659.1 2443670 R 546342 CDS YP_005745660.1 384862940 12331699 complement(2444060..2444803) 1 NC_017341.1 staphylococcal accessory regulator Y 2444803 sarY 12331699 sarY Staphylococcus aureus subsp. aureus str. JKD6008 staphylococcal accessory regulator Y YP_005745660.1 2444060 R 546342 CDS YP_005745661.1 384862941 12331700 complement(2444829..2446784) 1 NC_017341.1 helix-turn-helix- domain containing protein 2446784 12331700 SAA6008_02334 Staphylococcus aureus subsp. aureus str. JKD6008 helix-turn-helix- domain containing protein YP_005745661.1 2444829 R 546342 CDS YP_005745662.1 384862942 12331701 2447394..2448197 1 NC_017341.1 identified by match to protein family HMM PF05257; Secretory antigen precursor SsaA_1 2448197 ssaA_1 12331701 ssaA_1 Staphylococcus aureus subsp. aureus str. JKD6008 Secretory antigen precursor SsaA_1 YP_005745662.1 2447394 D 546342 CDS YP_005745663.1 384862943 12331702 complement(2448630..2450030) 1 NC_017341.1 putative Na+/H+ antiporter 2450030 nhaC 12331702 nhaC Staphylococcus aureus subsp. aureus str. JKD6008 putative Na+/H+ antiporter YP_005745663.1 2448630 R 546342 CDS YP_005745664.1 384862944 12331703 complement(2450125..2451207) 1 NC_017341.1 NAD/NADP octopine/nopaline dehydrogenase family protein 2451207 12331703 SAA6008_02337 Staphylococcus aureus subsp. aureus str. JKD6008 NAD/NADP octopine/nopaline dehydrogenase family protein YP_005745664.1 2450125 R 546342 CDS YP_005745665.1 384862945 12331704 2451455..2451877 1 NC_017341.1 hypothetical protein 2451877 12331704 SAA6008_02338 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745665.1 2451455 D 546342 CDS YP_005745666.1 384862946 12331705 2452114..2452614 1 NC_017341.1 secretory antigen SsaA 2452614 ssaA 12331705 ssaA Staphylococcus aureus subsp. aureus str. JKD6008 secretory antigen SsaA YP_005745666.1 2452114 D 546342 CDS YP_005745667.1 384862947 12331706 2452976..2453929 1 NC_017341.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein 2453929 12331706 SAA6008_02340 Staphylococcus aureus subsp. aureus str. JKD6008 D-isomer specific 2-hydroxyacid dehydrogenase family protein YP_005745667.1 2452976 D 546342 CDS YP_005745668.1 384862948 12331707 complement(2454021..2455145) 1 NC_017341.1 FAD-dependent oxidoreductase 2455145 12331707 SAA6008_02341 Staphylococcus aureus subsp. aureus str. JKD6008 FAD-dependent oxidoreductase YP_005745668.1 2454021 R 546342 CDS YP_005745669.1 384862949 12331708 complement(2455456..2456232) 1 NC_017341.1 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 2456232 lytA 12331708 lytA Staphylococcus aureus subsp. aureus str. JKD6008 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase YP_005745669.1 2455456 R 546342 CDS YP_005745670.1 384862950 12331709 complement(2456715..2457188) 1 NC_017341.1 hypothetical protein 2457188 12331709 SAA6008_02343 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745670.1 2456715 R 546342 CDS YP_005745671.1 384862951 12331710 complement(2457188..2460142) 1 NC_017341.1 molybdopterin oxidoreductase 2460142 12331710 SAA6008_02344 Staphylococcus aureus subsp. aureus str. JKD6008 molybdopterin oxidoreductase YP_005745671.1 2457188 R 546342 CDS YP_005745672.1 384862952 12329499 complement(2460744..2461700) 1 NC_017341.1 cell envelope transcriptional attenuator 2461700 12329499 SAA6008_02345 Staphylococcus aureus subsp. aureus str. JKD6008 cell envelope transcriptional attenuator YP_005745672.1 2460744 R 546342 CDS YP_005745673.1 384862953 12329500 complement(2461824..2462621) 1 NC_017341.1 inositol monophosphatase family protein 2462621 suhB 12329500 suhB Staphylococcus aureus subsp. aureus str. JKD6008 inositol monophosphatase family protein YP_005745673.1 2461824 R 546342 CDS YP_005745674.1 384862954 12329501 2463006..2463698 1 NC_017341.1 helix-turn-helix domain-containing protein 2463698 12329501 SAA6008_02347 Staphylococcus aureus subsp. aureus str. JKD6008 helix-turn-helix domain-containing protein YP_005745674.1 2463006 D 546342 CDS YP_005745675.1 384862955 12329503 complement(2464345..2465082) 1 NC_017341.1 weak CAAX amino terminal protease family domain; hypothetical protein 2465082 12329503 SAA6008_02349 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745675.1 2464345 R 546342 CDS YP_005745676.1 384862956 12329504 2465131..2465460 1 NC_017341.1 hypothetical protein 2465460 12329504 SAA6008_02350 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745676.1 2465131 D 546342 CDS YP_005745677.1 384862957 12329505 2465905..2466777 1 NC_017341.1 phosphosugar-binding transcriptional regulator RpiR family protein 2466777 12329505 SAA6008_02351 Staphylococcus aureus subsp. aureus str. JKD6008 phosphosugar-binding transcriptional regulator RpiR family protein YP_005745677.1 2465905 D 546342 CDS YP_005745678.1 384862958 12329506 complement(2467164..2468543) 1 NC_017341.1 APC family amino acid-polyamine-organocation transporter 2468543 12329506 SAA6008_02352 Staphylococcus aureus subsp. aureus str. JKD6008 APC family amino acid-polyamine-organocation transporter YP_005745678.1 2467164 R 546342 CDS YP_005745679.1 384862959 12329507 2468823..2469179 1 NC_017341.1 hypothetical protein 2469179 12329507 SAA6008_02353 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745679.1 2468823 D 546342 CDS YP_005745680.1 384862960 12329508 2469176..2469361 1 NC_017341.1 hypothetical protein 2469361 12329508 SAA6008_02354 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745680.1 2469176 D 546342 CDS YP_005745681.1 384862961 12329509 complement(2469457..2469645) 1 NC_017341.1 hypothetical protein 2469645 12329509 SAA6008_02355 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745681.1 2469457 R 546342 CDS YP_005745682.1 384862962 12329510 complement(2469659..2470294) 1 NC_017341.1 haloacid dehalogenase-like hydrolase 2470294 12329510 SAA6008_02356 Staphylococcus aureus subsp. aureus str. JKD6008 haloacid dehalogenase-like hydrolase YP_005745682.1 2469659 R 546342 CDS YP_005745683.1 384862963 12329511 complement(2470369..2471286) 1 NC_017341.1 sodium/bile acid symporter family protein 2471286 12329511 SAA6008_02357 Staphylococcus aureus subsp. aureus str. JKD6008 sodium/bile acid symporter family protein YP_005745683.1 2470369 R 546342 CDS YP_005745684.1 384862964 12329512 2471554..2472084 1 NC_017341.1 hypothetical protein 2472084 12329512 SAA6008_02358 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745684.1 2471554 D 546342 CDS YP_005745685.1 384862965 12329513 complement(2472150..2473754) 1 NC_017341.1 PTS system glucose-specific IIBC component 2473754 12329513 SAA6008_02359 Staphylococcus aureus subsp. aureus str. JKD6008 PTS system glucose-specific IIBC component YP_005745685.1 2472150 R 546342 CDS YP_005745686.1 384862966 12329514 2474084..2474848 1 NC_017341.1 phosphosugar-binding transcriptional regulator 2474848 12329514 SAA6008_02360 Staphylococcus aureus subsp. aureus str. JKD6008 phosphosugar-binding transcriptional regulator YP_005745686.1 2474084 D 546342 CDS YP_005745687.1 384862967 12329515 complement(2474906..2475412) 1 NC_017341.1 Activator of Hsp90 ATPase 1 family protein 2475412 12329515 SAA6008_02361 Staphylococcus aureus subsp. aureus str. JKD6008 Activator of Hsp90 ATPase 1 family protein YP_005745687.1 2474906 R 546342 CDS YP_005745688.1 384862968 12329516 complement(2475579..2476892) 1 NC_017341.1 NhaC family sodium:proton (Na+:H) antiporter 2476892 12329516 SAA6008_02362 Staphylococcus aureus subsp. aureus str. JKD6008 NhaC family sodium:proton (Na+:H) antiporter YP_005745688.1 2475579 R 546342 CDS YP_005745689.1 384862969 12329517 2476870..2477034 1 NC_017341.1 hypothetical protein 2477034 12329517 SAA6008_02363 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745689.1 2476870 D 546342 CDS YP_005745690.1 384862970 12329518 complement(2477117..2477686) 1 NC_017341.1 hypothetical protein 2477686 12329518 SAA6008_02364 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745690.1 2477117 R 546342 CDS YP_005745691.1 384862971 12329519 complement(2478173..2479054) 1 NC_017341.1 oxidoreductase 2479054 12329519 SAA6008_02365 Staphylococcus aureus subsp. aureus str. JKD6008 oxidoreductase YP_005745691.1 2478173 R 546342 CDS YP_005745692.1 384862972 12329520 complement(2479165..2480286) 1 NC_017341.1 TIGRFAM: amidohydrolase PFAM: peptidase M20; peptidase dimerisation domain protein KEGG: sav:SAV2329 similar to amino acid amidohydrolase; amino acid amidohydrolase 2480286 12329520 SAA6008_02366 Staphylococcus aureus subsp. aureus str. JKD6008 amino acid amidohydrolase YP_005745692.1 2479165 R 546342 CDS YP_005745693.1 384862973 12329521 complement(2480563..2481801) 1 NC_017341.1 putative imidazolonepropionase 2481801 hutI 12329521 hutI Staphylococcus aureus subsp. aureus str. JKD6008 putative imidazolonepropionase YP_005745693.1 2480563 R 546342 CDS YP_005745694.1 384862974 12329522 complement(2481801..2483462) 1 NC_017341.1 urocanate hydratase 2483462 hutU 12329522 hutU Staphylococcus aureus subsp. aureus str. JKD6008 urocanate hydratase YP_005745694.1 2481801 R 546342 CDS YP_005745695.1 384862975 12329523 2483622..2484506 1 NC_017341.1 PFAM: regulatory protein LysR; LysR substrate-binding KEGG: sao:SAOUHSC_02608 hypothetical protein; LysR family transcriptional regulator 2484506 12329523 SAA6008_02369 Staphylococcus aureus subsp. aureus str. JKD6008 LysR family transcriptional regulator YP_005745695.1 2483622 D 546342 CDS YP_005745696.1 384862976 12329524 2484688..2485107 1 NC_017341.1 fosfomycin resistance protein FosB 2485107 fosB 12329524 fosB Staphylococcus aureus subsp. aureus str. JKD6008 fosfomycin resistance protein FosB YP_005745696.1 2484688 D 546342 CDS YP_005745697.1 384862977 12329525 complement(2485363..2486298) 1 NC_017341.1 formiminoglutamase 2486298 hutG 12329525 hutG Staphylococcus aureus subsp. aureus str. JKD6008 formiminoglutamase YP_005745697.1 2485363 R 546342 CDS YP_005745698.1 384862978 12329526 2486588..2487847 1 NC_017341.1 identified by match to protein family HMM PF02517, membrane associated protease; metal-dependent membrane protease 2487847 12329526 SAA6008_02373 Staphylococcus aureus subsp. aureus str. JKD6008 metal-dependent membrane protease YP_005745698.1 2486588 D 546342 CDS YP_005745699.1 384862979 12329527 complement(2487913..2488599) 1 NC_017341.1 TIGRFAM: ribose 5-phosphate isomerase PFAM: Ribose 5-phosphate isomerase KEGG: sao:SAOUHSC_02612 ribose 5-phosphate isomerase, putative; ribose 5-phosphate isomerase 2488599 rpiA 12329527 rpiA Staphylococcus aureus subsp. aureus str. JKD6008 ribose 5-phosphate isomerase YP_005745699.1 2487913 R 546342 CDS YP_005745700.1 384862980 12329528 2488773..2489426 1 NC_017341.1 contains a MOSC domain identified in the molybdenum cofactor sulfurase; hypothetical protein 2489426 12329528 SAA6008_02375 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745700.1 2488773 D 546342 CDS YP_005745701.1 384862981 12329529 complement(2489662..2490681) 1 NC_017341.1 aldose 1-epimerase 2490681 galM 12329529 galM Staphylococcus aureus subsp. aureus str. JKD6008 aldose 1-epimerase YP_005745701.1 2489662 R 546342 CDS YP_005745702.1 384862982 12329530 complement(2490711..2491037) 1 NC_017341.1 hypothetical protein 2491037 ynfA 12329530 ynfA Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745702.1 2490711 R 546342 CDS YP_005745703.1 384862983 12329531 complement(2491255..2492487) 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, membrane protein 2492487 12329531 SAA6008_02378 Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, membrane protein YP_005745703.1 2491255 R 546342 CDS YP_005745704.1 384862984 12329532 complement(2492480..2493379) 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, ABC protein 2493379 12329532 SAA6008_02379 Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, ABC protein YP_005745704.1 2492480 R 546342 CDS YP_005745705.1 384862985 12329533 complement(2493610..2494257) 1 NC_017341.1 hypothetical protein 2494257 12329533 SAA6008_02380 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745705.1 2493610 R 546342 CDS YP_005745706.1 384862986 12329534 2494656..2495264 1 NC_017341.1 putative 3-methyladenine DNA glycosylase 2495264 12329534 SAA6008_02381 Staphylococcus aureus subsp. aureus str. JKD6008 putative 3-methyladenine DNA glycosylase YP_005745706.1 2494656 D 546342 CDS YP_005745707.1 384862987 12329535 2495601..2496809 1 NC_017341.1 ESS family glutamate:sodium (Na+) symporter 2496809 gltS 12329535 gltS Staphylococcus aureus subsp. aureus str. JKD6008 ESS family glutamate:sodium (Na+) symporter YP_005745707.1 2495601 D 546342 CDS YP_005745708.1 384862988 12329536 complement(2496857..2497906) 1 NC_017341.1 isopentenyl-diphosphate delta-isomerase 2497906 fni 12329536 fni Staphylococcus aureus subsp. aureus str. JKD6008 isopentenyl-diphosphate delta-isomerase YP_005745708.1 2496857 R 546342 CDS YP_005745709.1 384862989 12329537 complement(2497937..2498884) 1 NC_017341.1 magnesium and cobalt transport protein 2498884 corA 12329537 corA Staphylococcus aureus subsp. aureus str. JKD6008 magnesium and cobalt transport protein YP_005745709.1 2497937 R 546342 CDS YP_005745710.1 384862990 12329538 2498981..2499472 1 NC_017341.1 hypothetical protein 2499472 12329538 SAA6008_02385 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745710.1 2498981 D 546342 CDS YP_005745711.1 384862991 12329539 2499469..2499888 1 NC_017341.1 hypothetical protein 2499888 12329539 SAA6008_02386 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745711.1 2499469 D 546342 CDS YP_005745712.1 384862992 12329540 complement(2499996..2500853) 1 NC_017341.1 Alpha/beta hydrolase fold-3 domain-containing protein 2500853 12329540 SAA6008_02387 Staphylococcus aureus subsp. aureus str. JKD6008 Alpha/beta hydrolase fold-3 domain-containing protein YP_005745712.1 2499996 R 546342 CDS YP_005745713.1 384862993 12329541 2501124..2501762 1 NC_017341.1 hypothetical protein 2501762 12329541 SAA6008_02388 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745713.1 2501124 D 546342 CDS YP_005745714.1 384862994 12329542 complement(2502008..2503939) 1 NC_017341.1 MFS family major facilitator multidrug:cation transporter 2503939 12329542 SAA6008_02389 Staphylococcus aureus subsp. aureus str. JKD6008 MFS family major facilitator multidrug:cation transporter YP_005745714.1 2502008 R 546342 CDS YP_005745715.1 384862995 12329543 complement(2503952..2504590) 1 NC_017341.1 multidrug resistance protein A, drug resistance transporter 2504590 emrA 12329543 emrA Staphylococcus aureus subsp. aureus str. JKD6008 multidrug resistance protein A, drug resistance transporter YP_005745715.1 2503952 R 546342 CDS YP_005745716.1 384862996 12329544 2504720..2505271 1 NC_017341.1 TetR family transcriptional regulator 2505271 12329544 SAA6008_02391 Staphylococcus aureus subsp. aureus str. JKD6008 TetR family transcriptional regulator YP_005745716.1 2504720 D 546342 CDS YP_005745717.1 384862997 12329545 complement(2505501..2506709) 1 NC_017341.1 MFS family major facilitator transporter, teicoplanin:cation symporter 2506709 tcaB 12329545 tcaB Staphylococcus aureus subsp. aureus str. JKD6008 MFS family major facilitator transporter, teicoplanin:cation symporter YP_005745717.1 2505501 R 546342 CDS YP_005745718.1 384862998 12329546 complement(2506978..2508360) 1 NC_017341.1 teicoplanin resistance associated membrane protein TcaA protein 2508360 tcaA 12329546 tcaA Staphylococcus aureus subsp. aureus str. JKD6008 teicoplanin resistance associated membrane protein TcaA protein YP_005745718.1 2506978 R 546342 CDS YP_005745719.1 384862999 12329547 complement(2508600..2509055) 1 NC_017341.1 teicoplanin resistance operon transcriptional regulator TcaR 2509055 tcaR 12329547 tcaR Staphylococcus aureus subsp. aureus str. JKD6008 teicoplanin resistance operon transcriptional regulator TcaR YP_005745719.1 2508600 R 546342 CDS YP_005745720.1 384863000 12329548 2509250..2510218 1 NC_017341.1 identified by match to protein family HMM PF02698; hypothetical protein 2510218 12329548 SAA6008_02395 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745720.1 2509250 D 546342 CDS YP_005745721.1 384863001 12329549 2510793..2511149 1 NC_017341.1 truncated transposase for IS1272 2511149 12329549 SAA6008_02396 Staphylococcus aureus subsp. aureus str. JKD6008 truncated transposase for IS1272 YP_005745721.1 2510793 D 546342 CDS YP_005745722.1 384863002 12329550 complement(2511289..2511954) 1 NC_017341.1 PFAM: ABC transporter related SMART: AAA ATPase, sometimes referred to as hemin import ATP-binding protein hrtA; hemin import ATP-binding protein 2511954 12329550 SAA6008_02397 Staphylococcus aureus subsp. aureus str. JKD6008 hemin import ATP-binding protein YP_005745722.1 2511289 R 546342 CDS YP_005745723.1 384863003 12329551 complement(2511954..2513009) 1 NC_017341.1 PFAM: protein of unknown function DUF214 KEGG: sao:SAOUHSC_02641 permease, putative domain protein; hemin ABC superfamily ATP binding cassette transporter, permease component 2513009 12329551 SAA6008_02398 Staphylococcus aureus subsp. aureus str. JKD6008 hemin ABC superfamily ATP binding cassette transporter, permease component YP_005745723.1 2511954 R 546342 CDS YP_005745724.1 384863004 12329552 2513145..2513819 1 NC_017341.1 winged helix family two component transcriptional regulator 2513819 hssR 12329552 hssR Staphylococcus aureus subsp. aureus str. JKD6008 winged helix family two component transcriptional regulator YP_005745724.1 2513145 D 546342 CDS YP_005745725.1 384863005 12329553 2513812..2515185 1 NC_017341.1 integral membrane sensor signal transduction histidine kinase 2515185 hssS 12329553 hssS Staphylococcus aureus subsp. aureus str. JKD6008 integral membrane sensor signal transduction histidine kinase YP_005745725.1 2513812 D 546342 CDS YP_005745726.1 384863006 12329554 2515348..2515791 1 NC_017341.1 LytTr DNA-binding region-containing protein 2515791 lytT 12329554 lytT Staphylococcus aureus subsp. aureus str. JKD6008 LytTr DNA-binding region-containing protein YP_005745726.1 2515348 D 546342 CDS YP_005745727.1 384863007 12329555 2515788..2516243 1 NC_017341.1 membrane protein 2516243 12329555 SAA6008_02402 Staphylococcus aureus subsp. aureus str. JKD6008 membrane protein YP_005745727.1 2515788 D 546342 CDS YP_005745728.1 384863008 12329556 complement(2516309..2517787) 1 NC_017341.1 putative malate:quinone oxidoreductase 1 2517787 mqo1 12329556 mqo1 Staphylococcus aureus subsp. aureus str. JKD6008 putative malate:quinone oxidoreductase 1 YP_005745728.1 2516309 R 546342 CDS YP_005745729.1 384863009 12329557 complement(2518168..2519766) 1 NC_017341.1 TIGRFAM: L-lactate transport PFAM: L-lactate permease KEGG: sab:SAB0049 L-lactate permease; L-lactate permease 2519766 12329557 SAA6008_02404 Staphylococcus aureus subsp. aureus str. JKD6008 L-lactate permease YP_005745729.1 2518168 R 546342 CDS YP_005745730.1 384863010 12329558 2520068..2521756 1 NC_017341.1 hypothetical protein 2521756 12329558 SAA6008_02405 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745730.1 2520068 D 546342 CDS YP_005745731.1 384863011 12329559 complement(2521909..2522538) 1 NC_017341.1 hypothetical protein 2522538 12329559 SAA6008_02406 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745731.1 2521909 R 546342 CDS YP_005745732.1 384863012 12329560 complement(2522852..2523367) 1 NC_017341.1 PFAM: GCN5-related N-acetyltransferase KEGG: sao:SAOUHSC_02651 hypothetical protein, similar to transcription repressor of sporulation, septation and degradation paiA; acetyltransferase 2523367 12329560 SAA6008_02407 Staphylococcus aureus subsp. aureus str. JKD6008 acetyltransferase YP_005745732.1 2522852 R 546342 CDS YP_005745733.1 384863013 12329561 2523558..2524562 1 NC_017341.1 zinc-binding alcohol dehydrogenase 2524562 12329561 SAA6008_02408 Staphylococcus aureus subsp. aureus str. JKD6008 zinc-binding alcohol dehydrogenase YP_005745733.1 2523558 D 546342 CDS YP_005745734.1 384863014 12329562 complement(2524608..2525009) 1 NC_017341.1 PFAM: GCN5-related N-acetyltransferase KEGG: sav:SAV2371 similar to attachment to host cells and virulence; Acetyltransferase (GNAT) family 2525009 12329562 SAA6008_02409 Staphylococcus aureus subsp. aureus str. JKD6008 Acetyltransferase (GNAT) family YP_005745734.1 2524608 R 546342 CDS YP_005745735.1 384863015 12329563 complement(2525045..2526079) 1 NC_017341.1 pyridine nucleotide-disulfide oxidoreductase 2526079 12329563 SAA6008_02410 Staphylococcus aureus subsp. aureus str. JKD6008 pyridine nucleotide-disulfide oxidoreductase YP_005745735.1 2525045 R 546342 CDS YP_005745736.1 384863016 12329564 complement(2526090..2526206) 1 NC_017341.1 hypothetical protein 2526206 12329564 SAA6008_02411 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745736.1 2526090 R 546342 CDS YP_005745737.1 384863017 12329565 complement(2526311..2526709) 1 NC_017341.1 membrane protein 2526709 12329565 SAA6008_02412 Staphylococcus aureus subsp. aureus str. JKD6008 membrane protein YP_005745737.1 2526311 R 546342 CDS YP_005745738.1 384863018 12329566 complement(2526949..2528226) 1 NC_017341.1 hypothetical protein 2528226 yhgE 12329566 yhgE Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745738.1 2526949 R 546342 CDS YP_005745739.1 384863019 12329567 2528387..2529010 1 NC_017341.1 TetR family transcriptional regulator 2529010 tetR 12329567 tetR Staphylococcus aureus subsp. aureus str. JKD6008 TetR family transcriptional regulator YP_005745739.1 2528387 D 546342 CDS YP_005745740.1 384863020 12329568 2529056..2530000 1 NC_017341.1 Mg2+ transporter protein, CorA family protein 2530000 cobI 12329568 cobI Staphylococcus aureus subsp. aureus str. JKD6008 Mg2+ transporter protein, CorA family protein YP_005745740.1 2529056 D 546342 CDS YP_005745741.1 384863021 12329569 complement(2530086..2531528) 1 NC_017341.1 PTS system sucrose-specific IIBC component 2531528 12329569 SAA6008_02416 Staphylococcus aureus subsp. aureus str. JKD6008 PTS system sucrose-specific IIBC component YP_005745741.1 2530086 R 546342 CDS YP_005745742.1 384863022 12329570 2531711..2532094 1 NC_017341.1 hypothetical protein 2532094 12329570 SAA6008_02417 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745742.1 2531711 D 546342 CDS YP_005745743.1 384863023 12329572 2534955..2536127 1 NC_017341.1 transposase for IS256 2536127 12329572 SAA6008_02419 Staphylococcus aureus subsp. aureus str. JKD6008 transposase for IS256 YP_005745743.1 2534955 D 546342 CDS YP_005745744.1 384863024 12329573 2537090..2537512 1 NC_017341.1 has been referred to as general stress protein 26; pyridoxamine 5'-phosphate oxidase 2537512 12329573 SAA6008_02421 Staphylococcus aureus subsp. aureus str. JKD6008 pyridoxamine 5'-phosphate oxidase YP_005745744.1 2537090 D 546342 CDS YP_005745745.1 384863025 12329574 2537777..2538133 1 NC_017341.1 hypothetical protein 2538133 12329574 SAA6008_02422 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745745.1 2537777 D 546342 CDS YP_005745746.1 384863026 12329575 complement(2538476..2539720) 1 NC_017341.1 DAACS family dicarboxylate/amino acid:sodium (Na+) or proton (H+) symporter 2539720 gltT 12329575 gltT Staphylococcus aureus subsp. aureus str. JKD6008 DAACS family dicarboxylate/amino acid:sodium (Na+) or proton (H+) symporter YP_005745746.1 2538476 R 546342 CDS YP_005745747.1 384863027 12329576 complement(2539935..2540300) 1 NC_017341.1 hypothetical protein 2540300 12329576 SAA6008_02424 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745747.1 2539935 R 546342 CDS YP_005745748.1 384863028 12329577 2540830..2541144 1 NC_017341.1 MarR family regulatory protein 2541144 12329577 SAA6008_02425 Staphylococcus aureus subsp. aureus str. JKD6008 MarR family regulatory protein YP_005745748.1 2540830 D 546342 CDS YP_005745749.1 384863029 12329578 2541351..2541788 1 NC_017341.1 putative small heat shock protein 2541788 12329578 SAA6008_02426 Staphylococcus aureus subsp. aureus str. JKD6008 putative small heat shock protein YP_005745749.1 2541351 D 546342 CDS YP_005745750.1 384863030 12329579 complement(2541895..2543088) 1 NC_017341.1 MFS family major facilitator transporter, nitrate:nitrite antiporter 2543088 narK 12329579 narK Staphylococcus aureus subsp. aureus str. JKD6008 MFS family major facilitator transporter, nitrate:nitrite antiporter YP_005745750.1 2541895 R 546342 CDS YP_005745751.1 384863031 12329580 2543135..2543254 1 NC_017341.1 hypothetical protein 2543254 12329580 SAA6008_02428 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745751.1 2543135 D 546342 CDS YP_005745752.1 384863032 12329582 2544327..2545067 1 NC_017341.1 PFAM: regulatory protein MerR; TipAS antibiotic-recognition domain protein KEGG: sao:SAOUHSC_02674 hypothetical protein; MerR family transcriptional regulator 2545067 12329582 SAA6008_02431 Staphylococcus aureus subsp. aureus str. JKD6008 MerR family transcriptional regulator YP_005745752.1 2544327 D 546342 CDS YP_005745753.1 384863033 12329583 complement(2545325..2545927) 1 NC_017341.1 LuxR family two component transcriptional regulator 2545927 nreC 12329583 nreC Staphylococcus aureus subsp. aureus str. JKD6008 LuxR family two component transcriptional regulator YP_005745753.1 2545325 R 546342 CDS YP_005745754.1 384863034 12329584 complement(2546001..2547035) 1 NC_017341.1 oxygen sensor histidine kinase nreB 2547035 nreB 12329584 nreB Staphylococcus aureus subsp. aureus str. JKD6008 oxygen sensor histidine kinase nreB YP_005745754.1 2546001 R 546342 CDS YP_005745755.1 384863035 12329585 complement(2547059..2547511) 1 NC_017341.1 hypothetical protein 2547511 12329585 SAA6008_02434 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745755.1 2547059 R 546342 CDS YP_005745756.1 384863036 12329586 complement(2547531..2548208) 1 NC_017341.1 respiratory nitrate reductase subunit gamma 2548208 narI 12329586 narI Staphylococcus aureus subsp. aureus str. JKD6008 respiratory nitrate reductase subunit gamma YP_005745756.1 2547531 R 546342 CDS YP_005745757.1 384863037 12329587 complement(2548201..2548776) 1 NC_017341.1 nitrate reductase molybdenum cofactor assembly chaperone 2548776 narJ 12329587 narJ Staphylococcus aureus subsp. aureus str. JKD6008 nitrate reductase molybdenum cofactor assembly chaperone YP_005745757.1 2548201 R 546342 CDS YP_005745758.1 384863038 12329588 complement(2548769..2550328) 1 NC_017341.1 nitrate reductase subunit beta 2550328 narY 12329588 narY Staphylococcus aureus subsp. aureus str. JKD6008 nitrate reductase subunit beta YP_005745758.1 2548769 R 546342 CDS YP_005745759.1 384863039 12329589 complement(2550318..2554007) 1 NC_017341.1 respiratory nitrate reductase subunit alpha 2554007 narG 12329589 narG Staphylococcus aureus subsp. aureus str. JKD6008 respiratory nitrate reductase subunit alpha YP_005745759.1 2550318 R 546342 CDS YP_005745760.1 384863040 12329590 complement(2554316..2555293) 1 NC_017341.1 tetrapyrrole (corrin/porphyrin) methylase family protein 2555293 nasF 12329590 nasF Staphylococcus aureus subsp. aureus str. JKD6008 tetrapyrrole (corrin/porphyrin) methylase family protein YP_005745760.1 2554316 R 546342 CDS YP_005745761.1 384863041 12329591 complement(2555284..2555598) 1 NC_017341.1 nitrite reductase small subunit 2555598 nirD 12329591 nirD Staphylococcus aureus subsp. aureus str. JKD6008 nitrite reductase small subunit YP_005745761.1 2555284 R 546342 CDS YP_005745762.1 384863042 12329592 complement(2555602..2558007) 1 NC_017341.1 nitrite reductase, large subunit 2558007 nirB 12329592 nirB Staphylococcus aureus subsp. aureus str. JKD6008 nitrite reductase, large subunit YP_005745762.1 2555602 R 546342 CDS YP_005745763.1 384863043 12329593 complement(2558073..2558804) 1 NC_017341.1 sirohydrochlorin cobalt chelatase 2558804 cbiX 12329593 cbiX Staphylococcus aureus subsp. aureus str. JKD6008 sirohydrochlorin cobalt chelatase YP_005745763.1 2558073 R 546342 CDS YP_005745764.1 384863044 12329594 complement(2559034..2559570) 1 NC_017341.1 acetyltransferase (GNAT) family protein 2559570 12329594 SAA6008_02443 Staphylococcus aureus subsp. aureus str. JKD6008 acetyltransferase (GNAT) family protein YP_005745764.1 2559034 R 546342 CDS YP_005745765.1 384863045 12329595 complement(2559803..2560627) 1 NC_017341.1 formate/nitrite transporter family protein 2560627 12329595 SAA6008_02444 Staphylococcus aureus subsp. aureus str. JKD6008 formate/nitrite transporter family protein YP_005745765.1 2559803 R 546342 CDS YP_005745766.1 384863046 12329596 complement(2560844..2561026) 1 NC_017341.1 hypothetical protein 2561026 12329596 SAA6008_02445 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745766.1 2560844 R 546342 CDS YP_005745767.1 384863047 12329597 complement(2561110..2561577) 1 NC_017341.1 Activator of Hsp90 ATPase 1 family protein 2561577 12329597 SAA6008_02446 Staphylococcus aureus subsp. aureus str. JKD6008 Activator of Hsp90 ATPase 1 family protein YP_005745767.1 2561110 R 546342 CDS YP_005745768.1 384863048 12329598 complement(2561763..2563313) 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, binding protein 2563313 12329598 SAA6008_02447 Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, binding protein YP_005745768.1 2561763 R 546342 CDS YP_005745769.1 384863049 12329599 complement(2563608..2563874) 1 NC_017341.1 addiction module toxin Txe/YoeB family protein 2563874 12329599 SAA6008_02448 Staphylococcus aureus subsp. aureus str. JKD6008 addiction module toxin Txe/YoeB family protein YP_005745769.1 2563608 R 546342 CDS YP_005745770.1 384863050 12329600 complement(2563874..2564125) 1 NC_017341.1 addiction module antitoxin, Axe family 2564125 12329600 SAA6008_02449 Staphylococcus aureus subsp. aureus str. JKD6008 addiction module antitoxin, Axe family YP_005745770.1 2563874 R 546342 CDS YP_005745771.1 384863051 12329601 complement(2564398..2564997) 1 NC_017341.1 contains a weak DSBA-like thioredoxin domain; hypothetical protein 2564997 12329601 SAA6008_02450 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745771.1 2564398 R 546342 CDS YP_005745772.1 384863052 12329602 complement(2565016..2565387) 1 NC_017341.1 hypothetical protein 2565387 12329602 SAA6008_02451 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745772.1 2565016 R 546342 CDS YP_005745773.1 384863053 12329603 2565633..2566883 1 NC_017341.1 FemAB family peptidoglycan biosynthesis protein 2566883 fmhA 12329603 fmhA Staphylococcus aureus subsp. aureus str. JKD6008 FemAB family peptidoglycan biosynthesis protein YP_005745773.1 2565633 D 546342 CDS YP_005745774.1 384863054 12329604 complement(2566980..2567711) 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, ABC protein 2567711 12329604 SAA6008_02453 Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, ABC protein YP_005745774.1 2566980 R 546342 CDS YP_005745775.1 384863055 12329605 complement(2567708..2568427) 1 NC_017341.1 ABC transporter ATP-binding protein 2568427 12329605 SAA6008_02454 Staphylococcus aureus subsp. aureus str. JKD6008 ABC transporter ATP-binding protein YP_005745775.1 2567708 R 546342 CDS YP_005745776.1 384863056 12329606 complement(2568408..2569187) 1 NC_017341.1 amino acid ABC superfamily ATP binding cassette transporter, binding protein 2569187 12329606 SAA6008_02455 Staphylococcus aureus subsp. aureus str. JKD6008 amino acid ABC superfamily ATP binding cassette transporter, binding protein YP_005745776.1 2568408 R 546342 CDS YP_005745777.1 384863057 12329607 complement(2569308..2570747) 1 NC_017341.1 MFS family major facilitator transporter, multidrug :cation symporter 2570747 12329607 SAA6008_02456 Staphylococcus aureus subsp. aureus str. JKD6008 MFS family major facilitator transporter, multidrug :cation symporter YP_005745777.1 2569308 R 546342 CDS YP_005745778.1 384863058 12329608 complement(2571179..2571865) 1 NC_017341.1 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 2571865 gpm 12329608 gpm Staphylococcus aureus subsp. aureus str. JKD6008 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase YP_005745778.1 2571179 R 546342 CDS YP_005745779.1 384863059 12329609 complement(2572192..2573058) 1 NC_017341.1 cation diffusion facilitator family transporter 2573058 12329609 SAA6008_02458 Staphylococcus aureus subsp. aureus str. JKD6008 cation diffusion facilitator family transporter YP_005745779.1 2572192 R 546342 CDS YP_005745780.1 384863060 12329610 2573810..2575120 1 NC_017341.1 immunoglobulin G-binding protein SBI 2575120 sbi 12329610 sbi Staphylococcus aureus subsp. aureus str. JKD6008 immunoglobulin G-binding protein SBI YP_005745780.1 2573810 D 546342 CDS YP_005745781.1 384863061 12329611 2575620..2576585 1 NC_017341.1 TIGRFAM: beta-channel forming cytolysin PFAM: Combined Leucocidin/ASH4 hemolysin KEGG: sao:SAOUHSC_02708 gamma-hemolysin h-gamma-II subunit, putative; gamma-hemolysin component A precursor, HlgA 2576585 hlgA 12329611 hlgA Staphylococcus aureus subsp. aureus str. JKD6008 gamma-hemolysin component A precursor, HlgA YP_005745781.1 2575620 D 546342 CDS YP_005745782.1 384863062 12329612 2577153..2578100 1 NC_017341.1 TIGRFAM: beta-channel forming cytolysin PFAM: Combined Leucocidin/ASH4 hemolysin KEGG: sam:MW2343 gamma-hemolysin component C; gamma-hemolysin component C precursor, HlgC 2578100 hlgC 12329612 hlgC Staphylococcus aureus subsp. aureus str. JKD6008 gamma-hemolysin component C precursor, HlgC YP_005745782.1 2577153 D 546342 CDS YP_005745783.1 384863063 12329613 2578102..2579079 1 NC_017341.1 TIGRFAM: beta-channel forming cytolysin PFAM: Combined Leucocidin/ASH4 hemolysin KEGG: sao:SAOUHSC_02710 leukocidin F subunit precursor; gamma-hemolysin component C precursor, HlgB 2579079 hlgB 12329613 hlgB Staphylococcus aureus subsp. aureus str. JKD6008 gamma-hemolysin component C precursor, HlgB YP_005745783.1 2578102 D 546342 CDS YP_005745784.1 384863064 12329614 complement(2579131..2579598) 1 NC_017341.1 hypothetical protein 2579598 12329614 SAA6008_02463 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745784.1 2579131 R 546342 CDS YP_005745785.1 384863065 12329616 complement(2580311..2581426) 1 NC_017341.1 8-amino-7-oxononanoate synthase 2581426 bioF 12329616 bioF Staphylococcus aureus subsp. aureus str. JKD6008 8-amino-7-oxononanoate synthase YP_005745785.1 2580311 R 546342 CDS YP_005745786.1 384863066 12329617 complement(2581404..2582411) 1 NC_017341.1 putative biotin synthase 2582411 bioB 12329617 bioB Staphylococcus aureus subsp. aureus str. JKD6008 putative biotin synthase YP_005745786.1 2581404 R 546342 CDS YP_005745787.1 384863067 12329618 complement(2582413..2583771) 1 NC_017341.1 putative adenosylmethionine-8-amino-7-oxononanoate aminotransferase 2583771 bioA 12329618 bioA Staphylococcus aureus subsp. aureus str. JKD6008 putative adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_005745787.1 2582413 R 546342 CDS YP_005745788.1 384863068 12329619 complement(2583749..2584435) 1 NC_017341.1 putative dethiobiotin synthetase 2584435 bioD 12329619 bioD Staphylococcus aureus subsp. aureus str. JKD6008 putative dethiobiotin synthetase YP_005745788.1 2583749 R 546342 CDS YP_005745789.1 384863069 12329620 complement(2584887..2586620) 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, ABC/membrane protein 2586620 12329620 SAA6008_02470 Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, ABC/membrane protein YP_005745789.1 2584887 R 546342 CDS YP_005745790.1 384863070 12329621 complement(2586645..2588408) 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, ABC/membrane protein 2588408 12329621 SAA6008_02471 Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, ABC/membrane protein YP_005745790.1 2586645 R 546342 CDS YP_005745791.1 384863071 12329622 complement(2589276..2589662) 1 NC_017341.1 GtrA-like integral membrane protein 2589662 gtrA 12329622 gtrA Staphylococcus aureus subsp. aureus str. JKD6008 GtrA-like integral membrane protein YP_005745791.1 2589276 R 546342 CDS YP_005745792.1 384863072 12329623 2589930..2591072 1 NC_017341.1 PFAM: glycerate kinase KEGG: sao:SAOUHSC_02723 glycerate kinase, putative; glycerate kinase 2591072 glxK 12329623 glxK Staphylococcus aureus subsp. aureus str. JKD6008 glycerate kinase YP_005745792.1 2589930 D 546342 CDS YP_005745793.1 384863073 12329624 2591132..2591791 1 NC_017341.1 hypothetical protein 2591791 12329624 SAA6008_02474 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745793.1 2591132 D 546342 CDS YP_005745794.1 384863074 12329625 2591973..2593184 1 NC_017341.1 MFS family major facilitator transporter, bicyclomycin:cation symporter 2593184 bcr 12329625 bcr Staphylococcus aureus subsp. aureus str. JKD6008 MFS family major facilitator transporter, bicyclomycin:cation symporter YP_005745794.1 2591973 D 546342 CDS YP_005745795.1 384863075 12329626 complement(2593307..2593780) 1 NC_017341.1 putative transcriptional activator 2593780 12329626 SAA6008_02476 Staphylococcus aureus subsp. aureus str. JKD6008 putative transcriptional activator YP_005745795.1 2593307 R 546342 CDS YP_005745796.1 384863076 12329627 2593893..2594543 1 NC_017341.1 hypothetical protein 2594543 12329627 SAA6008_02477 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745796.1 2593893 D 546342 CDS YP_005745797.1 384863077 12329628 complement(2594606..2595412) 1 NC_017341.1 Domain similarity with Icc (phosphohydrolases), SbcD (DNA repair exonuclease) and, Calcineurin-like phosphoesterase; calcineurin-like phosphoesterase 2595412 12329628 SAA6008_02478 Staphylococcus aureus subsp. aureus str. JKD6008 calcineurin-like phosphoesterase YP_005745797.1 2594606 R 546342 CDS YP_005745798.1 384863078 12329629 2595698..2597107 1 NC_017341.1 putative amino acid permease 2597107 12329629 SAA6008_02479 Staphylococcus aureus subsp. aureus str. JKD6008 putative amino acid permease YP_005745798.1 2595698 D 546342 CDS YP_005745799.1 384863079 12329630 2597245..2599323 1 NC_017341.1 sodium/hydrogen exchanger family protein 2599323 12329630 SAA6008_02480 Staphylococcus aureus subsp. aureus str. JKD6008 sodium/hydrogen exchanger family protein YP_005745799.1 2597245 D 546342 CDS YP_005745800.1 384863080 12329631 complement(2599463..2601292) 1 NC_017341.1 APC family amino acid-polyamine-organocation transporter 2601292 12329631 SAA6008_02481 Staphylococcus aureus subsp. aureus str. JKD6008 APC family amino acid-polyamine-organocation transporter YP_005745800.1 2599463 R 546342 CDS YP_005745801.1 384863081 12329632 2601524..2603020 1 NC_017341.1 drug resistance-involved membrane protein; beta-lactamase 2603020 ampC 12329632 ampC Staphylococcus aureus subsp. aureus str. JKD6008 beta-lactamase YP_005745801.1 2601524 D 546342 CDS YP_005745802.1 384863082 12329633 complement(2603112..2603963) 1 NC_017341.1 NAD dependent epimerase/dehydratase 2603963 12329633 SAA6008_02483 Staphylococcus aureus subsp. aureus str. JKD6008 NAD dependent epimerase/dehydratase YP_005745802.1 2603112 R 546342 CDS YP_005745803.1 384863083 12329634 2604119..2604316 1 NC_017341.1 hypothetical protein 2604316 12329634 SAA6008_02484 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745803.1 2604119 D 546342 CDS YP_005745804.1 384863084 12329635 complement(2604285..2605220) 1 NC_017341.1 ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase 2605220 apbA 12329635 apbA Staphylococcus aureus subsp. aureus str. JKD6008 2-dehydropantoate 2-reductase YP_005745804.1 2604285 R 546342 CDS YP_005745805.1 384863085 12329636 complement(2605446..2606846) 1 NC_017341.1 MFS family major facilitator transporter 2606846 12329636 SAA6008_02486 Staphylococcus aureus subsp. aureus str. JKD6008 MFS family major facilitator transporter YP_005745805.1 2605446 R 546342 CDS YP_005745806.1 384863086 12329637 complement(2607140..2607835) 1 NC_017341.1 glycine betaine/L-proline ABC superfamily ATP binding cassette transporter, membrane protein 2607835 opuCD 12329637 opuCD Staphylococcus aureus subsp. aureus str. JKD6008 glycine betaine/L-proline ABC superfamily ATP binding cassette transporter, membrane protein YP_005745806.1 2607140 R 546342 CDS YP_005745807.1 384863087 12329638 complement(2607835..2608776) 1 NC_017341.1 glycine betaine/L-proline ABC superfamily ATP binding cassette transporter, binding protein 2608776 opuCC 12329638 opuCC Staphylococcus aureus subsp. aureus str. JKD6008 glycine betaine/L-proline ABC superfamily ATP binding cassette transporter, binding protein YP_005745807.1 2607835 R 546342 CDS YP_005745808.1 384863088 12329639 complement(2608793..2609428) 1 NC_017341.1 glycine betaine/choline ABC superfamily ATP binding cassette transporter, membrane protein 2609428 opuCB 12329639 opuCB Staphylococcus aureus subsp. aureus str. JKD6008 glycine betaine/choline ABC superfamily ATP binding cassette transporter, membrane protein YP_005745808.1 2608793 R 546342 CDS YP_005745809.1 384863089 12329640 complement(2609425..2610696) 1 NC_017341.1 glycine betaine/choline ABC superfamily ATP binding cassette transporter, ABC protein 2610696 opuCA 12329640 opuCA Staphylococcus aureus subsp. aureus str. JKD6008 glycine betaine/choline ABC superfamily ATP binding cassette transporter, ABC protein YP_005745809.1 2609425 R 546342 CDS YP_005745810.1 384863090 12329641 complement(2611321..2611920) 1 NC_017341.1 PFAM: Domain of unknown function DUF1801; hypothetical protein 2611920 12329641 SAA6008_02491 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745810.1 2611321 R 546342 CDS YP_005745811.1 384863091 12329642 2612100..2613737 1 NC_017341.1 APC family amino acid-polyamine-organocation transporter 2613737 12329642 SAA6008_02492 Staphylococcus aureus subsp. aureus str. JKD6008 APC family amino acid-polyamine-organocation transporter YP_005745811.1 2612100 D 546342 CDS YP_005745812.1 384863092 12329643 2614345..2615697 1 NC_017341.1 PFAM: Carboxylesterase type B KEGG: sav:SAV2451 similar to para-nitrobenzyl esterase chain A; para-nitrobenzyl esterase chain A 2615697 pnbA 12329643 pnbA Staphylococcus aureus subsp. aureus str. JKD6008 para-nitrobenzyl esterase chain A YP_005745812.1 2614345 D 546342 CDS YP_005745813.1 384863093 12329644 complement(2615759..2616937) 1 NC_017341.1 MFS family major facilitator transporter, chloramphenicol:cation symporter 2616937 12329644 SAA6008_02494 Staphylococcus aureus subsp. aureus str. JKD6008 MFS family major facilitator transporter, chloramphenicol:cation symporter YP_005745813.1 2615759 R 546342 CDS YP_005745814.1 384863094 12329645 complement(2617342..2618118) 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, membrane protein 2618118 12329645 SAA6008_02495 Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, membrane protein YP_005745814.1 2617342 R 546342 CDS YP_005745815.1 384863095 12329646 complement(2618111..2618773) 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, ABC protein 2618773 12329646 SAA6008_02496 Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, ABC protein YP_005745815.1 2618111 R 546342 CDS YP_005745816.1 384863096 12329647 complement(2619021..2620106) 1 NC_017341.1 M42 family glutamyl aminopeptidase 2620106 pepA2 12329647 pepA2 Staphylococcus aureus subsp. aureus str. JKD6008 M42 family glutamyl aminopeptidase YP_005745816.1 2619021 R 546342 CDS YP_005745817.1 384863097 12329648 complement(2620452..2620718) 1 NC_017341.1 toxin-antitoxin system, toxin component, Txe/YoeB family 2620718 12329648 SAA6008_02498 Staphylococcus aureus subsp. aureus str. JKD6008 toxin-antitoxin system, toxin component, Txe/YoeB family YP_005745817.1 2620452 R 546342 CDS YP_005745818.1 384863098 12329649 complement(2620718..2620975) 1 NC_017341.1 addiction module antitoxin, Axe family 2620975 stbD 12329649 stbD Staphylococcus aureus subsp. aureus str. JKD6008 addiction module antitoxin, Axe family YP_005745818.1 2620718 R 546342 CDS YP_005745819.1 384863099 12329650 2621334..2621789 1 NC_017341.1 PFAM: protein of unknown function DUF1307; hypothetical protein 2621789 12329650 SAA6008_02500 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745819.1 2621334 D 546342 CDS YP_005745820.1 384863100 12329651 complement(2621957..2623534) 1 NC_017341.1 glutamate synthase-ferredoxin large subunit 2623534 gltB2 12329651 gltB2 Staphylococcus aureus subsp. aureus str. JKD6008 glutamate synthase-ferredoxin large subunit YP_005745820.1 2621957 R 546342 CDS YP_005745821.1 384863101 12329652 2623729..2624478 1 NC_017341.1 hypothetical protein 2624478 12329652 SAA6008_02502 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745821.1 2623729 D 546342 CDS YP_005745822.1 384863102 12329653 complement(2624702..2625895) 1 NC_017341.1 MFS family major facilitator transporter 2625895 12329653 SAA6008_02503 Staphylococcus aureus subsp. aureus str. JKD6008 MFS family major facilitator transporter YP_005745822.1 2624702 R 546342 CDS YP_005745823.1 384863103 12329654 complement(2625907..2626656) 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, ABC protein 2626656 opp-1F 12329654 opp-1F Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, ABC protein YP_005745823.1 2625907 R 546342 CDS YP_005745824.1 384863104 12329655 complement(2626649..2627464) 1 NC_017341.1 oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein 2627464 opp-1D 12329655 opp-1D Staphylococcus aureus subsp. aureus str. JKD6008 oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein YP_005745824.1 2626649 R 546342 CDS YP_005745825.1 384863105 12329656 complement(2627461..2628330) 1 NC_017341.1 oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein 2628330 opp-1C 12329656 opp-1C Staphylococcus aureus subsp. aureus str. JKD6008 oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein YP_005745825.1 2627461 R 546342 CDS YP_005745826.1 384863106 12329657 complement(2628327..2629262) 1 NC_017341.1 oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein 2629262 opp-1B 12329657 opp-1B Staphylococcus aureus subsp. aureus str. JKD6008 oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein YP_005745826.1 2628327 R 546342 CDS YP_005745827.1 384863107 12329658 complement(2629275..2630855) 1 NC_017341.1 oligopeptide ABC superfamily ATP binding cassette transporter, binding protein 2630855 opp-1A 12329658 opp-1A Staphylococcus aureus subsp. aureus str. JKD6008 oligopeptide ABC superfamily ATP binding cassette transporter, binding protein YP_005745827.1 2629275 R 546342 CDS YP_005745828.1 384863108 12329659 complement(2631016..2632317) 1 NC_017341.1 hypothetical protein 2632317 12329659 SAA6008_02509 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745828.1 2631016 R 546342 CDS YP_005745829.1 384863109 12329660 complement(2632310..2633128) 1 NC_017341.1 rRNA methyltransferase FmrO 2633128 fmrO 12329660 fmrO Staphylococcus aureus subsp. aureus str. JKD6008 rRNA methyltransferase FmrO YP_005745829.1 2632310 R 546342 CDS YP_005745830.1 384863110 12329661 complement(2633139..2633912) 1 NC_017341.1 diaminopimelate epimerase 2633912 dapF 12329661 dapF Staphylococcus aureus subsp. aureus str. JKD6008 diaminopimelate epimerase YP_005745830.1 2633139 R 546342 CDS YP_005745831.1 384863111 12329662 complement(2634827..2635192) 1 NC_017341.1 hypothetical protein 2635192 12329662 SAA6008_02512 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745831.1 2634827 R 546342 CDS YP_005745832.1 384863112 12329664 2636506..2638044 1 NC_017341.1 PFAM: C4-dicarboxylate anaerobic carrier; AbgT putative transporter KEGG: sav:SAV2473 similar to aminobenzoyl-glutamate transport protein; aminobenzoyl-glutamate transport protein 2638044 12329664 SAA6008_02514 Staphylococcus aureus subsp. aureus str. JKD6008 aminobenzoyl-glutamate transport protein YP_005745832.1 2636506 D 546342 CDS YP_005745833.1 384863113 12329665 complement(2638156..2638578) 1 NC_017341.1 putative carboxymuconolactone decarboxylase 2638578 12329665 SAA6008_02515 Staphylococcus aureus subsp. aureus str. JKD6008 putative carboxymuconolactone decarboxylase YP_005745833.1 2638156 R 546342 CDS YP_005745834.1 384863114 12329666 complement(2639030..2639383) 1 NC_017341.1 hypothetical protein 2639383 12329666 SAA6008_02516 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745834.1 2639030 R 546342 CDS YP_005745835.1 384863115 12329667 complement(2639467..2639886) 1 NC_017341.1 hypothetical protein 2639886 12329667 SAA6008_02517 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745835.1 2639467 R 546342 CDS YP_005745836.1 384863116 12329668 complement(2640153..2640575) 1 NC_017341.1 hypothetical protein 2640575 12329668 SAA6008_02518 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745836.1 2640153 R 546342 CDS YP_005745837.1 384863117 12329669 complement(2640826..2641521) 1 NC_017341.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein KEGG: sav:SAV2478 similar to oxidoreductase; putative short chain dehydrogenase 2641521 12329669 SAA6008_02519 Staphylococcus aureus subsp. aureus str. JKD6008 putative short chain dehydrogenase YP_005745837.1 2640826 R 546342 CDS YP_005745838.1 384863118 12329670 2641810..2642091 1 NC_017341.1 hypothetical protein 2642091 12329670 SAA6008_02520 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745838.1 2641810 D 546342 CDS YP_005745839.1 384863119 12329671 complement(2642351..2642542) 1 NC_017341.1 hypothetical protein 2642542 12329671 SAA6008_02521 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745839.1 2642351 R 546342 CDS YP_005745840.1 384863120 12329672 complement(2643103..2643900) 1 NC_017341.1 putative staphylococcal tandem lipoprotein 2643900 12329672 SAA6008_02522 Staphylococcus aureus subsp. aureus str. JKD6008 putative staphylococcal tandem lipoprotein YP_005745840.1 2643103 R 546342 CDS YP_005745841.1 384863121 12329673 complement(2644009..2644710) 1 NC_017341.1 putative lipoprotein 2644710 12329673 SAA6008_02523 Staphylococcus aureus subsp. aureus str. JKD6008 putative lipoprotein YP_005745841.1 2644009 R 546342 CDS YP_005745842.1 384863122 12329674 complement(2645088..2647949) 1 NC_017341.1 PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein SMART: DEAD-like helicases KEGG: sas:SAS2376 putative helicase; DEAD/H helicase / Type III restriction enzyme, res subunit 2647949 12329674 SAA6008_02524 Staphylococcus aureus subsp. aureus str. JKD6008 DEAD/H helicase / Type III restriction enzyme, res subunit YP_005745842.1 2645088 R 546342 CDS YP_005745843.1 384863123 12329675 complement(2647951..2648343) 1 NC_017341.1 NUDIX hydrolase 2648343 12329675 SAA6008_02525 Staphylococcus aureus subsp. aureus str. JKD6008 NUDIX hydrolase YP_005745843.1 2647951 R 546342 CDS YP_005745844.1 384863124 12329676 2648631..2650268 1 NC_017341.1 may be bifunctional as phosphoglucomutase; phosphomannomutase 2650268 manB 12329676 manB Staphylococcus aureus subsp. aureus str. JKD6008 phosphomannomutase YP_005745844.1 2648631 D 546342 CDS YP_005745845.1 384863125 12329677 2650630..2650818 1 NC_017341.1 hypothetical protein 2650818 12329677 SAA6008_02528 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745845.1 2650630 D 546342 CDS YP_005745846.1 384863126 12329678 2651004..2651270 1 NC_017341.1 hypothetical protein 2651270 12329678 SAA6008_02529 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745846.1 2651004 D 546342 CDS YP_005745847.1 384863127 12329679 complement(2651592..2652785) 1 NC_017341.1 major facilitator superfamily cation symporter 2652785 12329679 SAA6008_02530 Staphylococcus aureus subsp. aureus str. JKD6008 major facilitator superfamily cation symporter YP_005745847.1 2651592 R 546342 CDS YP_005745848.1 384863128 12329681 complement(2656821..2657177) 1 NC_017341.1 TIGRFAM: staphylococcal accessory regulator family KEGG: sas:SAS2384 putative staphylococcal accessory regulator; staphylococcal accessory regulator T, SarT 2657177 sarT 12329681 sarT Staphylococcus aureus subsp. aureus str. JKD6008 staphylococcal accessory regulator T, SarT YP_005745848.1 2656821 R 546342 CDS YP_005745849.1 384863129 12329682 2657503..2658246 1 NC_017341.1 TIGRFAM: staphylococcal accessory regulator family PFAM: regulatory protein, MarR. This gene has multiple paralogs including a regular form and a tandem-repeat version; staphylococcal accessory regulator A, SarH1 2658246 sarH1 12329682 sarH1 Staphylococcus aureus subsp. aureus str. JKD6008 staphylococcal accessory regulator A, SarH1 YP_005745849.1 2657503 D 546342 CDS YP_005745850.1 384863130 12329683 complement(2658457..2659323) 1 NC_017341.1 UTP--glucose-1-phosphate uridylyltransferase 2659323 gtaB 12329683 gtaB Staphylococcus aureus subsp. aureus str. JKD6008 UTP--glucose-1-phosphate uridylyltransferase YP_005745850.1 2658457 R 546342 CDS YP_005745851.1 384863131 12329684 complement(2659503..2662256) 1 NC_017341.1 TIGRFAM: LPXTG-motif cell wall anchor domain PFAM: surface protein from Gram-positive cocci anchor region; Fibronectin binding repeat; YSIRK Gram-positive signal peptide KEGG: sav:SAV2502 fibronectin-binding protein homolog; fibronectin-binding protein B 2662256 12329684 SAA6008_02536 Staphylococcus aureus subsp. aureus str. JKD6008 fibronectin-binding protein B YP_005745851.1 2659503 R 546342 CDS YP_005745852.1 384863132 12329685 complement(2662486..2662608) 1 NC_017341.1 hypothetical protein 2662608 12329685 SAA6008_02537 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745852.1 2662486 R 546342 CDS YP_005745853.1 384863133 12329686 complement(2663007..2665994) 1 NC_017341.1 TIGRFAM: LPXTG-motif cell wall anchor domain PFAM: surface protein from Gram-positive cocci anchor region; Fibronectin binding repeat; YSIRK Gram-positive signal peptide KEGG: sav:SAV2502 fibronectin-binding protein homolog; fibronectin-binding protein A 2665994 12329686 SAA6008_02538 Staphylococcus aureus subsp. aureus str. JKD6008 fibronectin-binding protein A YP_005745853.1 2663007 R 546342 CDS YP_005745854.1 384863134 12329687 complement(2666288..2666401) 1 NC_017341.1 hypothetical protein 2666401 12329687 SAA6008_02539 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745854.1 2666288 R 546342 CDS YP_005745855.1 384863135 12329688 complement(2666532..2667890) 1 NC_017341.1 GntP family gluconate:proton (H+) symporter 2667890 gntP 12329688 gntP Staphylococcus aureus subsp. aureus str. JKD6008 GntP family gluconate:proton (H+) symporter YP_005745855.1 2666532 R 546342 CDS YP_005745856.1 384863136 12329689 complement(2668007..2669560) 1 NC_017341.1 putative gluconokinase 2669560 gntK 12329689 gntK Staphylococcus aureus subsp. aureus str. JKD6008 putative gluconokinase YP_005745856.1 2668007 R 546342 CDS YP_005745857.1 384863137 12329690 complement(2669584..2670264) 1 NC_017341.1 gluconate operon transcriptional repressor 2670264 gntR 12329690 gntR Staphylococcus aureus subsp. aureus str. JKD6008 gluconate operon transcriptional repressor YP_005745857.1 2669584 R 546342 CDS YP_005745858.1 384863138 12329691 complement(2670418..2671182) 1 NC_017341.1 MerR family transcriptional regulator 2671182 12329691 SAA6008_02543 Staphylococcus aureus subsp. aureus str. JKD6008 MerR family transcriptional regulator YP_005745858.1 2670418 R 546342 CDS YP_005745859.1 384863139 12329692 complement(2671347..2672039) 1 NC_017341.1 PFAM: RelA/SpoT domain protein KEGG: sao:SAOUHSC_02811 hypothetical protein; GTP pyrophosphokinase 2672039 12329692 SAA6008_02544 Staphylococcus aureus subsp. aureus str. JKD6008 GTP pyrophosphokinase YP_005745859.1 2671347 R 546342 CDS YP_005745860.1 384863140 12329693 complement(2672270..2672686) 1 NC_017341.1 hypothetical protein 2672686 12329693 SAA6008_02545 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745860.1 2672270 R 546342 CDS YP_005745861.1 384863141 12329694 complement(2672825..2674648) 1 NC_017341.1 hypothetical protein 2674648 12329694 SAA6008_02546 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745861.1 2672825 R 546342 CDS YP_005745862.1 384863142 12329695 complement(2675126..2676331) 1 NC_017341.1 MFS family major facilitator transporter, glucarate:cation symporter 2676331 12329695 SAA6008_02547 Staphylococcus aureus subsp. aureus str. JKD6008 MFS family major facilitator transporter, glucarate:cation symporter YP_005745862.1 2675126 R 546342 CDS YP_005745863.1 384863143 12329696 2676950..2677561 1 NC_017341.1 hypothetical protein 2677561 12329696 SAA6008_02548 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745863.1 2676950 D 546342 CDS YP_005745864.1 384863144 12329697 complement(2677658..2678821) 1 NC_017341.1 MFS family major facilitator transporter 2678821 12329697 SAA6008_02549 Staphylococcus aureus subsp. aureus str. JKD6008 MFS family major facilitator transporter YP_005745864.1 2677658 R 546342 CDS YP_005745865.1 384863145 12329698 complement(2678814..2679272) 1 NC_017341.1 transcriptional regulator MarR family protein 2679272 12329698 SAA6008_02550 Staphylococcus aureus subsp. aureus str. JKD6008 transcriptional regulator MarR family protein YP_005745865.1 2678814 R 546342 CDS YP_005745866.1 384863146 12329699 2679706..2680401 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, ABC protein 2680401 12329699 SAA6008_02551 Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, ABC protein YP_005745866.1 2679706 D 546342 CDS YP_005745867.1 384863147 12329700 2680403..2681173 1 NC_017341.1 lantibiotic protection ABC transporter permease subunit 2681173 12329700 SAA6008_02552 Staphylococcus aureus subsp. aureus str. JKD6008 lantibiotic protection ABC transporter permease subunit YP_005745867.1 2680403 D 546342 CDS YP_005745868.1 384863148 12329702 2683855..2684934 1 NC_017341.1 hypothetical protein 2684934 12329702 SAA6008_02555 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745868.1 2683855 D 546342 CDS YP_005745869.1 384863149 12329703 complement(2685039..2685632) 1 NC_017341.1 phospholipase/carboxylesterase 2685632 12329703 SAA6008_02556 Staphylococcus aureus subsp. aureus str. JKD6008 phospholipase/carboxylesterase YP_005745869.1 2685039 R 546342 CDS YP_005745870.1 384863150 12329704 complement(2685654..2686622) 1 NC_017341.1 Glyoxalase/bleomycin resistance protein/dioxygenase 2686622 12329704 SAA6008_02557 Staphylococcus aureus subsp. aureus str. JKD6008 Glyoxalase/bleomycin resistance protein/dioxygenase YP_005745870.1 2685654 R 546342 CDS YP_005745871.1 384863151 12329705 complement(2686700..2687134) 1 NC_017341.1 MarR family transcriptional regulatory protein 2687134 12329705 SAA6008_02558 Staphylococcus aureus subsp. aureus str. JKD6008 MarR family transcriptional regulatory protein YP_005745871.1 2686700 R 546342 CDS YP_005745872.1 384863152 12329706 2687361..2687645 1 NC_017341.1 GNAT family acetyltransferase 2687645 12329706 SAA6008_02559 Staphylococcus aureus subsp. aureus str. JKD6008 GNAT family acetyltransferase YP_005745872.1 2687361 D 546342 CDS YP_005745873.1 384863153 12329707 2687816..2688622 1 NC_017341.1 glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 2688622 12329707 SAA6008_02560 Staphylococcus aureus subsp. aureus str. JKD6008 glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein YP_005745873.1 2687816 D 546342 CDS YP_005745874.1 384863154 12329708 complement(2688742..2689413) 1 NC_017341.1 nitroreductase family protein 2689413 12329708 SAA6008_02561 Staphylococcus aureus subsp. aureus str. JKD6008 nitroreductase family protein YP_005745874.1 2688742 R 546342 CDS YP_005745875.1 384863155 12329709 2689683..2690675 1 NC_017341.1 catalyzes the formation of pyruvate from lactate; D-lactate dehydrogenase 2690675 12329709 SAA6008_02562 Staphylococcus aureus subsp. aureus str. JKD6008 D-lactate dehydrogenase YP_005745875.1 2689683 D 546342 CDS YP_005745876.1 384863156 12329710 complement(2690924..2691724) 1 NC_017341.1 haloacid dehalogenase-like hydrolase 2691724 12329710 SAA6008_02563 Staphylococcus aureus subsp. aureus str. JKD6008 haloacid dehalogenase-like hydrolase YP_005745876.1 2690924 R 546342 CDS YP_005745877.1 384863157 12329711 2692045..2692680 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, ABC protein 2692680 12329711 SAA6008_02564 Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, ABC protein YP_005745877.1 2692045 D 546342 CDS YP_005745878.1 384863158 12329712 2692695..2693417 1 NC_017341.1 hypothetical protein 2693417 12329712 SAA6008_02565 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745878.1 2692695 D 546342 CDS YP_005745879.1 384863159 12329713 complement(2693577..2694197) 1 NC_017341.1 sortase A transpeptidase 2694197 srtA 12329713 srtA Staphylococcus aureus subsp. aureus str. JKD6008 sortase A transpeptidase YP_005745879.1 2693577 R 546342 CDS YP_005745880.1 384863160 12329714 2694391..2694882 1 NC_017341.1 GNAT family acetyltransferase 2694882 12329714 SAA6008_02567 Staphylococcus aureus subsp. aureus str. JKD6008 GNAT family acetyltransferase YP_005745880.1 2694391 D 546342 CDS YP_005745881.1 384863161 12329715 complement(2695669..2696568) 1 NC_017341.1 L-serine dehydratase, iron-sulfur-dependent subunit alpha 2696568 sdaAA 12329715 sdaAA Staphylococcus aureus subsp. aureus str. JKD6008 L-serine dehydratase, iron-sulfur-dependent subunit alpha YP_005745881.1 2695669 R 546342 CDS YP_005745882.1 384863162 12329716 complement(2696582..2697262) 1 NC_017341.1 L-serine dehydratase, iron-sulfur-dependent subunit beta 2697262 sdaAB 12329716 sdaAB Staphylococcus aureus subsp. aureus str. JKD6008 L-serine dehydratase, iron-sulfur-dependent subunit beta YP_005745882.1 2696582 R 546342 CDS YP_005745883.1 384863163 12329717 complement(2697265..2698308) 1 NC_017341.1 some similarity to phosphotransferase system, fructose-specific IIC component; hypothetical protein 2698308 12329717 SAA6008_02570 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745883.1 2697265 R 546342 CDS YP_005745884.1 384863164 12329718 2699254..2700180 1 NC_017341.1 hypothetical protein 2700180 12329718 SAA6008_02571 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745884.1 2699254 D 546342 CDS YP_005745885.1 384863165 12329719 complement(2700262..2701230) 1 NC_017341.1 Alpha/beta hydrolase fold-3 domain-containing protein 2701230 aes 12329719 aes Staphylococcus aureus subsp. aureus str. JKD6008 Alpha/beta hydrolase fold-3 domain-containing protein YP_005745885.1 2700262 R 546342 CDS YP_005745886.1 384863166 12329720 complement(2701363..2701707) 1 NC_017341.1 thioredoxin 2701707 12329720 SAA6008_02573 Staphylococcus aureus subsp. aureus str. JKD6008 thioredoxin YP_005745886.1 2701363 R 546342 CDS YP_005745887.1 384863167 12329721 complement(2701749..2702159) 1 NC_017341.1 hypothetical protein 2702159 12329721 SAA6008_02574 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745887.1 2701749 R 546342 CDS YP_005745888.1 384863168 12329722 complement(2702539..2704605) 1 NC_017341.1 PTS system, glucose-specific IICBA component 2704605 12329722 SAA6008_02575 Staphylococcus aureus subsp. aureus str. JKD6008 PTS system, glucose-specific IICBA component YP_005745888.1 2702539 R 546342 CDS YP_005745889.1 384863169 12329723 complement(2704906..2706645) 1 NC_017341.1 thiamine pyrophosphate enzyme 2706645 cidC 12329723 cidC Staphylococcus aureus subsp. aureus str. JKD6008 thiamine pyrophosphate enzyme YP_005745889.1 2704906 R 546342 CDS YP_005745890.1 384863170 12329724 complement(2706692..2707381) 1 NC_017341.1 identified by match to protein family HMM PF04172. The two products of the lrgAB operon are potential membrane proteins, and LrgA and LrgB are both thought to control of murein hydrolase activity and penicillin tolerance; putative murein hydrolase subunit LrgB_1 2707381 lrgB_1 12329724 lrgB_1 Staphylococcus aureus subsp. aureus str. JKD6008 putative murein hydrolase subunit LrgB_1 YP_005745890.1 2706692 R 546342 CDS YP_005745891.1 384863171 12329725 complement(2707374..2707769) 1 NC_017341.1 PFAM: LrgA family protein. The two products of the lrgAB operon are potential membrane proteins, and LrgA and LrgB are both thought to control of murein hydrolase activity and penicillin tolerance.; putative murein hydrolase subunit LrgA_1 2707769 lrgA_1 12329725 lrgA_1 Staphylococcus aureus subsp. aureus str. JKD6008 putative murein hydrolase subunit LrgA_1 YP_005745891.1 2707374 R 546342 CDS YP_005745892.1 384863172 12329726 complement(2707982..2708845) 1 NC_017341.1 PFAM: regulatory protein LysR; LysR substrate-binding KEGG: saa:SAUSA300_2480 transcriptional regulator, LysR family; LysR family transcriptional regulator 2708845 12329726 SAA6008_02579 Staphylococcus aureus subsp. aureus str. JKD6008 LysR family transcriptional regulator YP_005745892.1 2707982 R 546342 CDS YP_005745893.1 384863173 12329727 2709635..2710066 1 NC_017341.1 PFAM: CHAP domain containing protein KEGG: sao:SAOUHSC_02855 LysM domain protein; N-acetylmuramoyl-L-alanine amidase 2710066 12329727 SAA6008_02581 Staphylococcus aureus subsp. aureus str. JKD6008 N-acetylmuramoyl-L-alanine amidase YP_005745893.1 2709635 D 546342 CDS YP_005745894.1 384863174 12329728 complement(2710826..2711059) 1 NC_017341.1 hypothetical protein 2711059 12329728 SAA6008_02582 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745894.1 2710826 R 546342 CDS YP_005745895.1 384863175 12329729 complement(2711662..2712939) 1 NC_017341.1 hydroxymethylglutaryl-CoA reductase, degradative 2712939 mvaA 12329729 mvaA Staphylococcus aureus subsp. aureus str. JKD6008 hydroxymethylglutaryl-CoA reductase, degradative YP_005745895.1 2711662 R 546342 CDS YP_005745896.1 384863176 12329730 2713193..2714359 1 NC_017341.1 3-hydroxy-3-methylglutaryl coenzyme A synthase 2714359 mvaS 12329730 mvaS Staphylococcus aureus subsp. aureus str. JKD6008 3-hydroxy-3-methylglutaryl coenzyme A synthase YP_005745896.1 2713193 D 546342 CDS YP_005745897.1 384863177 12329731 complement(2714529..2715050) 1 NC_017341.1 methylated-DNA--protein-cysteine methyltransferase 2715050 ada 12329731 ada Staphylococcus aureus subsp. aureus str. JKD6008 methylated-DNA--protein-cysteine methyltransferase YP_005745897.1 2714529 R 546342 CDS YP_005745898.1 384863178 12329732 2715459..2717564 1 NC_017341.1 PFAM: UvrB/UvrC protein; AAA ATPase central domain protein; ATPase AAA-2 domain protein SMART: AAA ATPase KEGG: sav:SAV2548 ATP-dependent Clp proteinase chain; chaperone ATPase 2717564 12329732 SAA6008_02586 Staphylococcus aureus subsp. aureus str. JKD6008 chaperone ATPase YP_005745898.1 2715459 D 546342 CDS YP_005745899.1 384863179 12329733 complement(2717633..2717803) 1 NC_017341.1 hypothetical protein 2717803 12329733 SAA6008_02587 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745899.1 2717633 R 546342 CDS YP_005745900.1 384863180 12329734 complement(2717816..2719810) 1 NC_017341.1 TIGRFAM: ferrous iron transport protein B; small GTP-binding protein PFAM: GTP-binding protein, HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; putative ferrous iron transport protein B 2719810 12329734 SAA6008_02588 Staphylococcus aureus subsp. aureus str. JKD6008 putative ferrous iron transport protein B YP_005745900.1 2717816 R 546342 CDS YP_005745901.1 384863181 12329735 complement(2719822..2720049) 1 NC_017341.1 ferrous iron transport protein A 2720049 feoA 12329735 feoA Staphylococcus aureus subsp. aureus str. JKD6008 ferrous iron transport protein A YP_005745901.1 2719822 R 546342 CDS YP_005745902.1 384863182 12329736 complement(2720265..2722733) 1 NC_017341.1 RND superfamily resistance-nodulation-cell division:proton (H+) antiporter 2722733 12329736 SAA6008_02590 Staphylococcus aureus subsp. aureus str. JKD6008 RND superfamily resistance-nodulation-cell division:proton (H+) antiporter YP_005745902.1 2720265 R 546342 CDS YP_005745903.1 384863183 12329737 2722899..2723447 1 NC_017341.1 conserved regulatory protein 2723447 12329737 SAA6008_02591 Staphylococcus aureus subsp. aureus str. JKD6008 conserved regulatory protein YP_005745903.1 2722899 D 546342 CDS YP_005745904.1 384863184 12329738 complement(2723524..2723667) 1 NC_017341.1 hypothetical protein 2723667 12329738 SAA6008_02592 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745904.1 2723524 R 546342 CDS YP_005745905.1 384863185 12329739 complement(2723803..2725347) 1 NC_017341.1 catalyzes the conversion of 1-proline-5-carboxylate dehydrogenase to L-glutamate; 1-pyrroline-5-carboxylate dehydrogenase 2725347 rocA 12329739 rocA Staphylococcus aureus subsp. aureus str. JKD6008 1-pyrroline-5-carboxylate dehydrogenase YP_005745905.1 2723803 R 546342 CDS YP_005745906.1 384863186 12329740 complement(2725537..2726136) 1 NC_017341.1 maltose O-acetyltransferase 2726136 12329740 SAA6008_02594 Staphylococcus aureus subsp. aureus str. JKD6008 maltose O-acetyltransferase YP_005745906.1 2725537 R 546342 CDS YP_005745907.1 384863187 12329741 2726366..2726566 1 NC_017341.1 hypothetical protein 2726566 12329741 SAA6008_02595 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745907.1 2726366 D 546342 CDS YP_005745908.1 384863188 12329742 2726806..2729214 1 NC_017341.1 P-ATPase superfamily P-type ATPase copper (Cu2+) transporter 2729214 copA 12329742 copA Staphylococcus aureus subsp. aureus str. JKD6008 P-ATPase superfamily P-type ATPase copper (Cu2+) transporter YP_005745908.1 2726806 D 546342 CDS YP_005745909.1 384863189 12329743 2729750..2729965 1 NC_017341.1 MerTP family mercury (Hg2+) permease, binding protein MerP 2729965 merP 12329743 merP Staphylococcus aureus subsp. aureus str. JKD6008 MerTP family mercury (Hg2+) permease, binding protein MerP YP_005745909.1 2729750 D 546342 CDS YP_005745910.1 384863190 12329744 complement(2730055..2731083) 1 NC_017341.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein 2731083 12329744 SAA6008_02598 Staphylococcus aureus subsp. aureus str. JKD6008 D-isomer specific 2-hydroxyacid dehydrogenase family protein YP_005745910.1 2730055 R 546342 CDS YP_005745911.1 384863191 12329745 complement(2731076..2732230) 1 NC_017341.1 N-succinyldiaminopimelate aminotransferase 2732230 12329745 SAA6008_02599 Staphylococcus aureus subsp. aureus str. JKD6008 N-succinyldiaminopimelate aminotransferase YP_005745911.1 2731076 R 546342 CDS YP_005745912.1 384863192 12329746 complement(2732657..2734165) 1 NC_017341.1 dehydrosqualene desaturase 2734165 crtN 12329746 crtN Staphylococcus aureus subsp. aureus str. JKD6008 dehydrosqualene desaturase YP_005745912.1 2732657 R 546342 CDS YP_005745913.1 384863193 12329747 complement(2734177..2735040) 1 NC_017341.1 squalene/phytoene synthase 2735040 12329747 SAA6008_02601 Staphylococcus aureus subsp. aureus str. JKD6008 squalene/phytoene synthase YP_005745913.1 2734177 R 546342 CDS YP_005745914.1 384863194 12329748 complement(2735077..2736159) 1 NC_017341.1 glycosyl transferase family protein 2736159 12329748 SAA6008_02602 Staphylococcus aureus subsp. aureus str. JKD6008 glycosyl transferase family protein YP_005745914.1 2735077 R 546342 CDS YP_005745915.1 384863195 12329749 complement(2736210..2737703) 1 NC_017341.1 phytoene desaturase 2737703 crtI 12329749 crtI Staphylococcus aureus subsp. aureus str. JKD6008 phytoene desaturase YP_005745915.1 2736210 R 546342 CDS YP_005745916.1 384863196 12329750 complement(2737696..2738193) 1 NC_017341.1 glycosyl-4,4'-diaponeurosporenoate acyltransferase 2738193 12329750 SAA6008_02604 Staphylococcus aureus subsp. aureus str. JKD6008 glycosyl-4,4'-diaponeurosporenoate acyltransferase YP_005745916.1 2737696 R 546342 CDS YP_005745917.1 384863197 12329751 complement(2738365..2739132) 1 NC_017341.1 secretory antigen 2739132 12329751 SAA6008_02605 Staphylococcus aureus subsp. aureus str. JKD6008 secretory antigen YP_005745917.1 2738365 R 546342 CDS YP_005745918.1 384863198 12329752 complement(2739493..2741304) 1 NC_017341.1 PFAM: acyltransferase 3 KEGG: sas:SAS0844 hypothetical protein; O-acetyltransferase 2741304 12329752 SAA6008_02606 Staphylococcus aureus subsp. aureus str. JKD6008 O-acetyltransferase YP_005745918.1 2739493 R 546342 CDS YP_005745919.1 384863199 12329753 complement(2741990..2742691) 1 NC_017341.1 immunodominant antigen A, transglycosylase isaA 2742691 isaA 12329753 isaA Staphylococcus aureus subsp. aureus str. JKD6008 immunodominant antigen A, transglycosylase isaA YP_005745919.1 2741990 R 546342 CDS YP_005745920.1 384863200 12329754 complement(2743299..2744354) 1 NC_017341.1 similar to regulatory protein (pfoS/R); toxin regulatorly-like protein 2744354 12329754 SAA6008_02608 Staphylococcus aureus subsp. aureus str. JKD6008 toxin regulatorly-like protein YP_005745920.1 2743299 R 546342 CDS YP_005745921.1 384863201 12329755 2744500..2744613 1 NC_017341.1 hypothetical protein 2744613 12329755 SAA6008_02609 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745921.1 2744500 D 546342 CDS YP_005745922.1 384863202 12329756 2744765..2745334 1 NC_017341.1 transcriptional regulator, AcrR 2745334 acrA 12329756 acrA Staphylococcus aureus subsp. aureus str. JKD6008 transcriptional regulator, AcrR YP_005745922.1 2744765 D 546342 CDS YP_005745923.1 384863203 12329757 2745598..2746032 1 NC_017341.1 hypothetical protein 2746032 12329757 SAA6008_02611 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745923.1 2745598 D 546342 CDS YP_005745924.1 384863204 12329758 2746252..2746482 1 NC_017341.1 hypothetical protein 2746482 12329758 SAA6008_02612 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745924.1 2746252 D 546342 CDS YP_005745925.1 384863205 12329759 complement(2746645..2747022) 1 NC_017341.1 Glyoxalase/bleomycin resistance protein/dioxygenase 2747022 12329759 SAA6008_02613 Staphylococcus aureus subsp. aureus str. JKD6008 Glyoxalase/bleomycin resistance protein/dioxygenase YP_005745925.1 2746645 R 546342 CDS YP_005745926.1 384863206 12329760 complement(2747039..2747860) 1 NC_017341.1 putative NmrA negative transcriptional regulator family protein 2747860 nrmA 12329760 nrmA Staphylococcus aureus subsp. aureus str. JKD6008 putative NmrA negative transcriptional regulator family protein YP_005745926.1 2747039 R 546342 CDS YP_005745927.1 384863207 12329761 complement(2747879..2748178) 1 NC_017341.1 hypothetical protein 2748178 12329761 SAA6008_02615 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745927.1 2747879 R 546342 CDS YP_005745928.1 384863208 12329762 2748309..2748866 1 NC_017341.1 TetR family transcriptional regulator 2748866 12329762 SAA6008_02616 Staphylococcus aureus subsp. aureus str. JKD6008 TetR family transcriptional regulator YP_005745928.1 2748309 D 546342 CDS YP_005745929.1 384863209 12329763 2748859..2749563 1 NC_017341.1 short chain dehydrogenase 2749563 12329763 SAA6008_02617 Staphylococcus aureus subsp. aureus str. JKD6008 short chain dehydrogenase YP_005745929.1 2748859 D 546342 CDS YP_005745930.1 384863210 12329764 2749661..2750671 1 NC_017341.1 amidohydrolase 2750671 12329764 SAA6008_02618 Staphylococcus aureus subsp. aureus str. JKD6008 amidohydrolase YP_005745930.1 2749661 D 546342 CDS YP_005745931.1 384863211 12329765 2750691..2751521 1 NC_017341.1 putative hydrolase/acyltransferase 2751521 12329765 SAA6008_02619 Staphylococcus aureus subsp. aureus str. JKD6008 putative hydrolase/acyltransferase YP_005745931.1 2750691 D 546342 CDS YP_005745932.1 384863212 12329766 complement(2751668..2752558) 1 NC_017341.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein KEGG: sav:SAV2582 similar to cobalamin synthesis related protein CobW; cobalamin synthesis related protein, CobW 2752558 12329766 SAA6008_02620 Staphylococcus aureus subsp. aureus str. JKD6008 cobalamin synthesis related protein, CobW YP_005745932.1 2751668 R 546342 CDS YP_005745933.1 384863213 12329767 complement(2752658..2753998) 1 NC_017341.1 FeoB family ferrous iron (Fe2+) uptake protein 2753998 12329767 SAA6008_02621 Staphylococcus aureus subsp. aureus str. JKD6008 FeoB family ferrous iron (Fe2+) uptake protein YP_005745933.1 2752658 R 546342 CDS YP_005745934.1 384863214 12329768 complement(2753992..2755098) 1 NC_017341.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2755098 12329768 SAA6008_02622 Staphylococcus aureus subsp. aureus str. JKD6008 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_005745934.1 2753992 R 546342 CDS YP_005745935.1 384863215 12329770 complement(2756130..2756945) 1 NC_017341.1 putative ATPase/transposase 2756945 12329770 SAA6008_02624 Staphylococcus aureus subsp. aureus str. JKD6008 putative ATPase/transposase YP_005745935.1 2756130 R 546342 CDS YP_005745936.1 384863216 12329771 complement(2756938..2758380) 1 NC_017341.1 transposase for transposon Tn552 2758380 12329771 SAA6008_02625 Staphylococcus aureus subsp. aureus str. JKD6008 transposase for transposon Tn552 YP_005745936.1 2756938 R 546342 CDS YP_005745937.1 384863217 12329772 complement(2758352..2758945) 1 NC_017341.1 Resolvase, N-terminal domain-containing protein 2758945 binL 12329772 binL Staphylococcus aureus subsp. aureus str. JKD6008 Resolvase, N-terminal domain-containing protein YP_005745937.1 2758352 R 546342 CDS YP_005745938.1 384863218 12329773 complement(2759207..2759587) 1 NC_017341.1 PFAM: Penicillinase repressor KEGG: sau:SAP012 penicillinase repressor; transcriptional repressor 2759587 12329773 SAA6008_02627 Staphylococcus aureus subsp. aureus str. JKD6008 transcriptional repressor YP_005745938.1 2759207 R 546342 CDS YP_005745939.1 384863219 12329774 complement(2759577..2761334) 1 NC_017341.1 beta-lactamase regulatory protein 2761334 blaR1 12329774 blaR1 Staphylococcus aureus subsp. aureus str. JKD6008 beta-lactamase regulatory protein YP_005745939.1 2759577 R 546342 CDS YP_005745940.1 384863220 12329775 2761441..2762286 1 NC_017341.1 PFAM: beta-lactamase KEGG: sau:SAP010 beta-lactamase; beta-lactamase precursor, BlaZ 2762286 blaZ 12329775 blaZ Staphylococcus aureus subsp. aureus str. JKD6008 beta-lactamase precursor, BlaZ YP_005745940.1 2761441 D 546342 CDS YP_005745941.1 384863221 12329777 complement(2763183..2763539) 1 NC_017341.1 hypothetical protein 2763539 12329777 SAA6008_02631 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745941.1 2763183 R 546342 CDS YP_005745942.1 384863222 12329778 complement(2763595..2764185) 1 NC_017341.1 hypothetical protein 2764185 12329778 SAA6008_02632 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745942.1 2763595 R 546342 CDS YP_005745943.1 384863223 12329779 complement(2764192..2765238) 1 NC_017341.1 putative traG membrane protein 2765238 12329779 SAA6008_02633 Staphylococcus aureus subsp. aureus str. JKD6008 putative traG membrane protein YP_005745943.1 2764192 R 546342 CDS YP_005745944.1 384863224 12329780 complement(2765228..2767075) 1 NC_017341.1 membrane protein 2767075 12329780 SAA6008_02634 Staphylococcus aureus subsp. aureus str. JKD6008 membrane protein YP_005745944.1 2765228 R 546342 CDS YP_005745945.1 384863225 12329781 complement(2767080..2768432) 1 NC_017341.1 FtsK/SpoIIIE family cell division protein 2768432 12329781 SAA6008_02635 Staphylococcus aureus subsp. aureus str. JKD6008 FtsK/SpoIIIE family cell division protein YP_005745945.1 2767080 R 546342 CDS YP_005745946.1 384863226 12329782 complement(2768492..2770987) 1 NC_017341.1 hypothetical protein 2770987 12329782 SAA6008_02636 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745946.1 2768492 R 546342 CDS YP_005745947.1 384863227 12329783 complement(2771022..2771405) 1 NC_017341.1 hypothetical protein 2771405 12329783 SAA6008_02637 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745947.1 2771022 R 546342 CDS YP_005745948.1 384863228 12329784 complement(2771417..2771677) 1 NC_017341.1 hypothetical protein 2771677 12329784 SAA6008_02638 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745948.1 2771417 R 546342 CDS YP_005745949.1 384863229 12329785 complement(2771682..2772737) 1 NC_017341.1 hypothetical protein 2772737 12329785 SAA6008_02639 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745949.1 2771682 R 546342 CDS YP_005745950.1 384863230 12329786 complement(2772798..2773823) 1 NC_017341.1 replication initiation factor family protein 2773823 12329786 SAA6008_02640 Staphylococcus aureus subsp. aureus str. JKD6008 replication initiation factor family protein YP_005745950.1 2772798 R 546342 CDS YP_005745951.1 384863231 12329787 complement(2774064..2774366) 1 NC_017341.1 hypothetical protein 2774366 12329787 SAA6008_02641 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745951.1 2774064 R 546342 CDS YP_005745952.1 384863232 12329788 complement(2774380..2774700) 1 NC_017341.1 hypothetical protein 2774700 12329788 SAA6008_02642 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745952.1 2774380 R 546342 CDS YP_005745953.1 384863233 12329789 complement(2774851..2774991) 1 NC_017341.1 hypothetical protein 2774991 12329789 SAA6008_02643 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745953.1 2774851 R 546342 CDS YP_005745954.1 384863234 12329790 complement(2775349..2775645) 1 NC_017341.1 hypothetical protein 2775645 12329790 SAA6008_02644 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745954.1 2775349 R 546342 CDS YP_005745955.1 384863235 12329791 complement(2775633..2775971) 1 NC_017341.1 conserved cytoplasmic protein 2775971 12329791 SAA6008_02645 Staphylococcus aureus subsp. aureus str. JKD6008 conserved cytoplasmic protein YP_005745955.1 2775633 R 546342 CDS YP_005745956.1 384863236 12329792 complement(2776016..2776294) 1 NC_017341.1 hypothetical protein 2776294 12329792 SAA6008_02646 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745956.1 2776016 R 546342 CDS YP_005745957.1 384863237 12329793 complement(2776631..2777497) 1 NC_017341.1 fructosamine kinase 2777497 12329793 SAA6008_02647 Staphylococcus aureus subsp. aureus str. JKD6008 fructosamine kinase YP_005745957.1 2776631 R 546342 CDS YP_005745958.1 384863238 12329794 2777715..2778779 1 NC_017341.1 putative dihydroorotate dehydrogenase 2778779 pyrD 12329794 pyrD Staphylococcus aureus subsp. aureus str. JKD6008 putative dihydroorotate dehydrogenase YP_005745958.1 2777715 D 546342 CDS YP_005745959.1 384863239 12329795 2778934..2779209 1 NC_017341.1 hypothetical protein 2779209 12329795 SAA6008_02649 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745959.1 2778934 D 546342 CDS YP_005745960.1 384863240 12329796 complement(2779395..2780117) 1 NC_017341.1 PFAM: protein of unknown function DUF208; hypothetical protein 2780117 12329796 SAA6008_02650 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745960.1 2779395 R 546342 CDS YP_005745961.1 384863241 12329797 2780473..2780922 1 NC_017341.1 3-demethylubiquinone-9 3-methyltransferase 2780922 12329797 SAA6008_02651 Staphylococcus aureus subsp. aureus str. JKD6008 3-demethylubiquinone-9 3-methyltransferase YP_005745961.1 2780473 D 546342 CDS YP_005745962.1 384863242 12329798 complement(2781003..2781590) 1 NC_017341.1 putative TetR-family transcriptional regulator 2781590 12329798 SAA6008_02652 Staphylococcus aureus subsp. aureus str. JKD6008 putative TetR-family transcriptional regulator YP_005745962.1 2781003 R 546342 CDS YP_005745963.1 384863243 12329799 2781733..2783415 1 NC_017341.1 X-Pro dipeptidyl-peptidase 2783415 pepX 12329799 pepX Staphylococcus aureus subsp. aureus str. JKD6008 X-Pro dipeptidyl-peptidase YP_005745963.1 2781733 D 546342 CDS YP_005745964.1 384863244 12329800 complement(2783544..2783915) 1 NC_017341.1 low molecular weight phosphotyrosine protein phosphatase 2783915 panD 12329800 panD Staphylococcus aureus subsp. aureus str. JKD6008 low molecular weight phosphotyrosine protein phosphatase YP_005745964.1 2783544 R 546342 CDS YP_005745965.1 384863245 12329801 complement(2783929..2784780) 1 NC_017341.1 putative pantoate--beta-alanine ligase 2784780 panC 12329801 panC Staphylococcus aureus subsp. aureus str. JKD6008 putative pantoate--beta-alanine ligase YP_005745965.1 2783929 R 546342 CDS YP_005745966.1 384863246 12329802 complement(2784773..2785591) 1 NC_017341.1 putative 3-methyl-2-oxobutanoate hydroxymethyltransferase 2785591 panB 12329802 panB Staphylococcus aureus subsp. aureus str. JKD6008 putative 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_005745966.1 2784773 R 546342 CDS YP_005745967.1 384863247 12329803 2785664..2786524 1 NC_017341.1 putative ketopantoate reductase 2786524 panE 12329803 panE Staphylococcus aureus subsp. aureus str. JKD6008 putative ketopantoate reductase YP_005745967.1 2785664 D 546342 CDS YP_005745968.1 384863248 12329804 complement(2786610..2787314) 1 NC_017341.1 PFAM: alpha-acetolactate decarboxylase KEGG: sao:SAOUHSC_02921 alpha-acetolactate decarboxylase; alpha-acetolactate decarboxylase 2787314 budA2 12329804 budA2 Staphylococcus aureus subsp. aureus str. JKD6008 alpha-acetolactate decarboxylase YP_005745968.1 2786610 R 546342 CDS YP_005745969.1 384863249 12329805 complement(2787592..2788551) 1 NC_017341.1 L-lactate dehydrogenase 2 2788551 ldh2 12329805 ldh2 Staphylococcus aureus subsp. aureus str. JKD6008 L-lactate dehydrogenase 2 YP_005745969.1 2787592 R 546342 CDS YP_005745970.1 384863250 12329806 2789237..2790685 1 NC_017341.1 APC family amino acid-polyamine-organocation transporter 2790685 12329806 SAA6008_02660 Staphylococcus aureus subsp. aureus str. JKD6008 APC family amino acid-polyamine-organocation transporter YP_005745970.1 2789237 D 546342 CDS YP_005745971.1 384863251 12329807 complement(2790765..2792102) 1 NC_017341.1 catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; 4-aminobutyrate aminotransferase 2792102 12329807 SAA6008_02661 Staphylococcus aureus subsp. aureus str. JKD6008 4-aminobutyrate aminotransferase YP_005745971.1 2790765 R 546342 CDS YP_005745972.1 384863252 12329808 2792641..2792772 1 NC_017341.1 hypothetical protein 2792772 12329808 SAA6008_02662 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745972.1 2792641 D 546342 CDS YP_005745973.1 384863253 12329809 2792895..2793785 1 NC_017341.1 fructose-bisphosphate aldolase 2793785 fdaB 12329809 fdaB Staphylococcus aureus subsp. aureus str. JKD6008 fructose-bisphosphate aldolase YP_005745973.1 2792895 D 546342 CDS YP_005745974.1 384863254 12329810 complement(2793978..2795474) 1 NC_017341.1 putative malate:quinone oxidoreductase 2 2795474 mqo2 12329810 mqo2 Staphylococcus aureus subsp. aureus str. JKD6008 putative malate:quinone oxidoreductase 2 YP_005745974.1 2793978 R 546342 CDS YP_005745975.1 384863255 12329811 complement(2796161..2797759) 1 NC_017341.1 AMP-dependent synthetase and ligase 2797759 acsA2 12329811 acsA2 Staphylococcus aureus subsp. aureus str. JKD6008 AMP-dependent synthetase and ligase YP_005745975.1 2796161 R 546342 CDS YP_005745976.1 384863256 12329812 complement(2797953..2798396) 1 NC_017341.1 possibly involved in biosynthesis of extracellular polysaccharides; antibiotic biosynthesis monooxygenase 2798396 12329812 SAA6008_02667 Staphylococcus aureus subsp. aureus str. JKD6008 antibiotic biosynthesis monooxygenase YP_005745976.1 2797953 R 546342 CDS YP_005745977.1 384863257 12329813 complement(2798676..2798888) 1 NC_017341.1 hypothetical protein 2798888 12329813 SAA6008_02668 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745977.1 2798676 R 546342 CDS YP_005745978.1 384863258 12329814 complement(2799166..2800875) 1 NC_017341.1 putative choline dehydrogenase 2800875 betA 12329814 betA Staphylococcus aureus subsp. aureus str. JKD6008 putative choline dehydrogenase YP_005745978.1 2799166 R 546342 CDS YP_005745979.1 384863259 12329815 complement(2801136..2802626) 1 NC_017341.1 glycine betaine aldehyde dehydrogenase gbsA 2802626 gbsA 12329815 gbsA Staphylococcus aureus subsp. aureus str. JKD6008 glycine betaine aldehyde dehydrogenase gbsA YP_005745979.1 2801136 R 546342 CDS YP_005745980.1 384863260 12329816 2802858..2803442 1 NC_017341.1 transcriptional regulator-like protein 2803442 12329816 SAA6008_02671 Staphylococcus aureus subsp. aureus str. JKD6008 transcriptional regulator-like protein YP_005745980.1 2802858 D 546342 CDS YP_005745981.1 384863261 12329817 complement(2803612..2805234) 1 NC_017341.1 choline/carnitine/betaine transporter, BCCT family 2805234 cudT 12329817 cudT Staphylococcus aureus subsp. aureus str. JKD6008 choline/carnitine/betaine transporter, BCCT family YP_005745981.1 2803612 R 546342 CDS YP_005745982.1 384863262 12329818 complement(2805752..2806288) 1 NC_017341.1 anaerobic ribonucleoside-triphosphate reductase activating protein 2806288 nrdG 12329818 nrdG Staphylococcus aureus subsp. aureus str. JKD6008 anaerobic ribonucleoside-triphosphate reductase activating protein YP_005745982.1 2805752 R 546342 CDS YP_005745983.1 384863263 12329819 complement(2806285..2808135) 1 NC_017341.1 anaerobic ribonucleotide reductase, large subunit 2808135 nrdD 12329819 nrdD Staphylococcus aureus subsp. aureus str. JKD6008 anaerobic ribonucleotide reductase, large subunit YP_005745983.1 2806285 R 546342 CDS YP_005745984.1 384863264 12329820 complement(2808382..2809752) 1 NC_017341.1 CitMHS family citrate-magnesium (Mg2+):proton (H+) citrate-calcium (Ca2+):proton (H+) symporter 2809752 citM 12329820 citM Staphylococcus aureus subsp. aureus str. JKD6008 CitMHS family citrate-magnesium (Mg2+):proton (H+) citrate-calcium (Ca2+):proton (H+) symporter YP_005745984.1 2808382 R 546342 CDS YP_005745985.1 384863265 12329821 complement(2810055..2810168) 1 NC_017341.1 hypothetical protein 2810168 12329821 SAA6008_02676 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745985.1 2810055 R 546342 CDS YP_005745986.1 384863266 12329822 complement(2810241..2810849) 1 NC_017341.1 catlayzes the formation of siroheme from precorrin-2; precorrin-2 dehydrogenase 2810849 cysG 12329822 cysG Staphylococcus aureus subsp. aureus str. JKD6008 precorrin-2 dehydrogenase YP_005745986.1 2810241 R 546342 CDS YP_005745987.1 384863267 12329823 complement(2810915..2812795) 1 NC_017341.1 sulfite reductase (NADPH) flavoprotein alpha-component 2812795 cysJ 12329823 cysJ Staphylococcus aureus subsp. aureus str. JKD6008 sulfite reductase (NADPH) flavoprotein alpha-component YP_005745987.1 2810915 R 546342 CDS YP_005745988.1 384863268 12329824 complement(2813186..2813683) 1 NC_017341.1 putative glutathione peroxidase 2813683 gpxA2 12329824 gpxA2 Staphylococcus aureus subsp. aureus str. JKD6008 putative glutathione peroxidase YP_005745988.1 2813186 R 546342 CDS YP_005745989.1 384863269 12329825 complement(2814378..2814491) 1 NC_017341.1 hypothetical protein 2814491 12329825 SAA6008_02680 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745989.1 2814378 R 546342 CDS YP_005745990.1 384863270 12329826 complement(2815124..2817124) 1 NC_017341.1 ABC superfamily ATP binding cassette transporter, membrane protein 2817124 12329826 SAA6008_02681 Staphylococcus aureus subsp. aureus str. JKD6008 ABC superfamily ATP binding cassette transporter, membrane protein YP_005745990.1 2815124 R 546342 CDS YP_005745991.1 384863271 12329827 complement(2817121..2817876) 1 NC_017341.1 PFAM: ABC transporter related SMART: AAA ATPase; ABC transporter ATP-binding protein 2817876 12329827 SAA6008_02682 Staphylococcus aureus subsp. aureus str. JKD6008 ABC transporter ATP-binding protein YP_005745991.1 2817121 R 546342 CDS YP_005745992.1 384863272 12329828 complement(2817984..2818880) 1 NC_017341.1 integral membrane sensor signal transduction histidine kinase 2818880 12329828 SAA6008_02683 Staphylococcus aureus subsp. aureus str. JKD6008 integral membrane sensor signal transduction histidine kinase YP_005745992.1 2817984 R 546342 CDS YP_005745993.1 384863273 12329829 complement(2818882..2819547) 1 NC_017341.1 winged helix family two component transcriptional regulator 2819547 12329829 SAA6008_02684 Staphylococcus aureus subsp. aureus str. JKD6008 winged helix family two component transcriptional regulator YP_005745993.1 2818882 R 546342 CDS YP_005745994.1 384863274 12329830 complement(2819573..2819761) 1 NC_017341.1 hypothetical protein 2819761 12329830 SAA6008_02685 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005745994.1 2819573 R 546342 CDS YP_005745995.1 384863275 12329831 2819971..2821395 1 NC_017341.1 alkaline phosphatase PhoA 2821395 phoA 12329831 phoA Staphylococcus aureus subsp. aureus str. JKD6008 alkaline phosphatase PhoA YP_005745995.1 2819971 D 546342 CDS YP_005745996.1 384863276 12329832 complement(2821678..2822133) 1 NC_017341.1 contains a MarR-family domain; transcriptional regulator SlyA 2822133 slyA 12329832 slyA Staphylococcus aureus subsp. aureus str. JKD6008 transcriptional regulator SlyA YP_005745996.1 2821678 R 546342 CDS YP_005745997.1 384863277 12329833 complement(2822378..2823139) 1 NC_017341.1 putative esterase 2823139 12329833 SAA6008_02688 Staphylococcus aureus subsp. aureus str. JKD6008 putative esterase YP_005745997.1 2822378 R 546342 CDS YP_005745998.1 384863278 12329834 complement(2823255..2825768) 1 NC_017341.1 fibrinogen and keratin-10 binding surface anchored protein; clumping factor B 2825768 clfB 12329834 clfB Staphylococcus aureus subsp. aureus str. JKD6008 clumping factor B YP_005745998.1 2823255 R 546342 CDS YP_005745999.1 384863279 12329835 complement(2826118..2826822) 1 NC_017341.1 Crp family transcriptional regulator 2826822 12329835 SAA6008_02690 Staphylococcus aureus subsp. aureus str. JKD6008 Crp family transcriptional regulator YP_005745999.1 2826118 R 546342 CDS YP_005746000.1 384863280 12329836 complement(2826921..2827889) 1 NC_017341.1 carbamate kinase 2827889 arcC 12329836 arcC Staphylococcus aureus subsp. aureus str. JKD6008 carbamate kinase YP_005746000.1 2826921 R 546342 CDS YP_005746001.1 384863281 12329837 complement(2827879..2829315) 1 NC_017341.1 arginine/ornithine APC family amino acid-polyamine-organocation transporter, antiporter 2829315 arcD 12329837 arcD Staphylococcus aureus subsp. aureus str. JKD6008 arginine/ornithine APC family amino acid-polyamine-organocation transporter, antiporter YP_005746001.1 2827879 R 546342 CDS YP_005746002.1 384863282 12329838 complement(2829400..2830410) 1 NC_017341.1 putative ornithine carbamoyltransferase 2830410 arcB 12329838 arcB Staphylococcus aureus subsp. aureus str. JKD6008 putative ornithine carbamoyltransferase YP_005746002.1 2829400 R 546342 CDS YP_005746003.1 384863283 12329839 complement(2830443..2831678) 1 NC_017341.1 arginine deiminase 2831678 arcA 12329839 arcA Staphylococcus aureus subsp. aureus str. JKD6008 arginine deiminase YP_005746003.1 2830443 R 546342 CDS YP_005746004.1 384863284 12329840 complement(2832025..2832474) 1 NC_017341.1 ArgR family transcriptional regulator 2832474 argR 12329840 argR Staphylococcus aureus subsp. aureus str. JKD6008 ArgR family transcriptional regulator YP_005746004.1 2832025 R 546342 CDS YP_005746005.1 384863285 12329841 complement(2832841..2834337) 1 NC_017341.1 zinc metalloproteinase aureolysin precursor 2834337 aur 12329841 aur Staphylococcus aureus subsp. aureus str. JKD6008 zinc metalloproteinase aureolysin precursor YP_005746005.1 2832841 R 546342 CDS YP_005746006.1 384863286 12329842 complement(2834784..2835311) 1 NC_017341.1 immunodominant antigen B 2835311 isaB 12329842 isaB Staphylococcus aureus subsp. aureus str. JKD6008 immunodominant antigen B YP_005746006.1 2834784 R 546342 CDS YP_005746007.1 384863287 12329843 2835567..2836040 1 NC_017341.1 conserved low-complexity protein 2836040 12329843 SAA6008_02698 Staphylococcus aureus subsp. aureus str. JKD6008 conserved low-complexity protein YP_005746007.1 2835567 D 546342 CDS YP_005746008.1 384863288 12329844 2836280..2838154 1 NC_017341.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; PRD domain protein; Helix-turn-helix type 11 domain protein; Helix-turn-helix Mga DNA-binding trans-acting positive regulator KEGG: sav:SAV2640 similar to transcription antiterminator BglG family; transcription antiterminator, BglG family 2838154 12329844 SAA6008_02699 Staphylococcus aureus subsp. aureus str. JKD6008 transcription antiterminator, BglG family YP_005746008.1 2836280 D 546342 CDS YP_005746009.1 384863289 12329845 2838231..2840183 1 NC_017341.1 PTS system mannose-specific transporter subunit IIBCA 2840183 12329845 SAA6008_02700 Staphylococcus aureus subsp. aureus str. JKD6008 PTS system mannose-specific transporter subunit IIBCA YP_005746009.1 2838231 D 546342 CDS YP_005746010.1 384863290 12329846 2840197..2841135 1 NC_017341.1 mannose-6-phosphate isomerase 2841135 pmi 12329846 pmi Staphylococcus aureus subsp. aureus str. JKD6008 mannose-6-phosphate isomerase YP_005746010.1 2840197 D 546342 CDS YP_005746011.1 384863291 12329847 complement(2841247..2844228) 1 NC_017341.1 phage infection protein 2844228 12329847 SAA6008_02702 Staphylococcus aureus subsp. aureus str. JKD6008 phage infection protein YP_005746011.1 2841247 R 546342 CDS YP_005746012.1 384863292 12329848 2844439..2846298 1 NC_017341.1 N-acetylmuramoyl-L-alanine amidase domain-containing protein 2846298 12329848 SAA6008_02703 Staphylococcus aureus subsp. aureus str. JKD6008 N-acetylmuramoyl-L-alanine amidase domain-containing protein YP_005746012.1 2844439 D 546342 CDS YP_005746013.1 384863293 12329849 complement(2846563..2847123) 1 NC_017341.1 isochorismatase 2847123 12329849 SAA6008_02704 Staphylococcus aureus subsp. aureus str. JKD6008 isochorismatase YP_005746013.1 2846563 R 546342 CDS YP_005746014.1 384863294 12329850 complement(2847291..2849117) 1 NC_017341.1 LPXTG cell wall surface anchor family protein 2849117 sasF 12329850 sasF Staphylococcus aureus subsp. aureus str. JKD6008 LPXTG cell wall surface anchor family protein YP_005746014.1 2847291 R 546342 CDS YP_005746015.1 384863295 12329851 complement(2849416..2850774) 1 NC_017341.1 alpha-glucosyltransferase 2850774 12329851 SAA6008_02706 Staphylococcus aureus subsp. aureus str. JKD6008 alpha-glucosyltransferase YP_005746015.1 2849416 R 546342 CDS YP_005746016.1 384863296 12329852 complement(2850767..2852275) 1 NC_017341.1 TIGRFAM: Conserved hypothetical protein CHP02918 PFAM: glycosyl transferase group 1; Protein of unknown function DUF1975 KEGG: sav:SAV2648 similar to lipopolysaccharide biosynthesis protein; Poly(glycerol-phosphate) alpha-glucosyltransferase 2852275 12329852 SAA6008_02707 Staphylococcus aureus subsp. aureus str. JKD6008 Poly(glycerol-phosphate) alpha-glucosyltransferase YP_005746016.1 2850767 R 546342 CDS YP_005746017.1 384863297 12329853 complement(2852293..2854623) 1 NC_017341.1 Sec family Type I general secretory pathway protein SecA 2854623 secA2 12329853 secA2 Staphylococcus aureus subsp. aureus str. JKD6008 Sec family Type I general secretory pathway protein SecA YP_005746017.1 2852293 R 546342 CDS YP_005746018.1 384863298 12329854 complement(2854673..2855632) 1 NC_017341.1 accessory Sec system protein Asp3 2855632 asp3 12329854 asp3 Staphylococcus aureus subsp. aureus str. JKD6008 accessory Sec system protein Asp3 YP_005746018.1 2854673 R 546342 CDS YP_005746019.1 384863299 12329855 complement(2855610..2857181) 1 NC_017341.1 accessory secretory protein Asp2 2857181 asp2 12329855 asp2 Staphylococcus aureus subsp. aureus str. JKD6008 accessory secretory protein Asp2 YP_005746019.1 2855610 R 546342 CDS YP_005746020.1 384863300 12329856 complement(2857168..2858721) 1 NC_017341.1 hypothetical protein 2858721 12329856 SAA6008_02711 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005746020.1 2857168 R 546342 CDS YP_005746021.1 384863301 12329857 complement(2858732..2859943) 1 NC_017341.1 preprotein translocase subunit SecY 2859943 secY 12329857 secY Staphylococcus aureus subsp. aureus str. JKD6008 preprotein translocase subunit SecY YP_005746021.1 2858732 R 546342 CDS YP_005746022.1 384863302 12329858 complement(2860072..2865351) 1 NC_017341.1 serine-rich repeat-containing protein 2865351 12329858 SAA6008_02713 Staphylococcus aureus subsp. aureus str. JKD6008 serine-rich repeat-containing protein YP_005746022.1 2860072 R 546342 CDS YP_005746023.1 384863303 12329859 complement(2865898..2866590) 1 NC_017341.1 putative flavin reductase 2866590 12329859 SAA6008_02714 Staphylococcus aureus subsp. aureus str. JKD6008 putative flavin reductase YP_005746023.1 2865898 R 546342 CDS YP_005746024.1 384863304 12329861 2867993..2868136 1 NC_017341.1 hypothetical protein 2868136 12329861 SAA6008_02717 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005746024.1 2867993 D 546342 CDS YP_005746025.1 384863305 12329862 2868235..2868645 1 NC_017341.1 hypothetical protein 2868645 12329862 SAA6008_02718 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005746025.1 2868235 D 546342 CDS YP_005746026.1 384863306 12329863 complement(2868730..2869341) 1 NC_017341.1 putative flavin reductase 2869341 12329863 SAA6008_02719 Staphylococcus aureus subsp. aureus str. JKD6008 putative flavin reductase YP_005746026.1 2868730 R 546342 CDS YP_005746027.1 384863307 12329864 complement(2869420..2869896) 1 NC_017341.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; a fusion protein of this enzyme with MsrB provides protection against oxidative stress in Neisseria gonorrhoeae; methionine sulfoxide reductase A 2869896 msrA 12329864 msrA Staphylococcus aureus subsp. aureus str. JKD6008 methionine sulfoxide reductase A YP_005746027.1 2869420 R 546342 CDS YP_005746028.1 384863308 12329865 complement(2869899..2870399) 1 NC_017341.1 acetyltransferase (GNAT) family protein 2870399 12329865 SAA6008_02721 Staphylococcus aureus subsp. aureus str. JKD6008 acetyltransferase (GNAT) family protein YP_005746028.1 2869899 R 546342 CDS YP_005746029.1 384863309 12329866 complement(2870634..2871401) 1 NC_017341.1 capsular polysaccharide biosynthesis protein Cap1C 2871401 cap1C 12329866 cap1C Staphylococcus aureus subsp. aureus str. JKD6008 capsular polysaccharide biosynthesis protein Cap1C YP_005746029.1 2870634 R 546342 CDS YP_005746030.1 384863310 12329867 complement(2871398..2872087) 1 NC_017341.1 CobQ/CobB/MinD/ParA nucleotide binding domain; capsular polysaccharide biosynthesis protein Cap1B 2872087 cap1B 12329867 cap1B Staphylococcus aureus subsp. aureus str. JKD6008 capsular polysaccharide biosynthesis protein Cap1B YP_005746030.1 2871398 R 546342 CDS YP_005746031.1 384863311 12329868 complement(2872104..2872799) 1 NC_017341.1 autoinducer sensor protein response regulator protein 2872799 cap1A 12329868 cap1A Staphylococcus aureus subsp. aureus str. JKD6008 autoinducer sensor protein response regulator protein YP_005746031.1 2872104 R 546342 CDS YP_005746032.1 384863312 12329869 complement(2873612..2874172) 1 NC_017341.1 ica operon HTH-type negative transcriptional regulator 2874172 icaR 12329869 icaR Staphylococcus aureus subsp. aureus str. JKD6008 ica operon HTH-type negative transcriptional regulator YP_005746032.1 2873612 R 546342 CDS YP_005746033.1 384863313 12329870 2874336..2875574 1 NC_017341.1 predicted polysaccharide polymerase involved in biofilm formation; required for the synthesis of the beta-1,6-N-acetylglucosamine polysaccharide; intercellular adhesion protein icaA 2875574 icaA 12329870 icaA Staphylococcus aureus subsp. aureus str. JKD6008 intercellular adhesion protein icaA YP_005746033.1 2874336 D 546342 CDS YP_005746034.1 384863314 12329871 2875840..2876712 1 NC_017341.1 intercellular adhesion deacetylase IcaB 2876712 icaB 12329871 icaB Staphylococcus aureus subsp. aureus str. JKD6008 intercellular adhesion deacetylase IcaB YP_005746034.1 2875840 D 546342 CDS YP_005746035.1 384863315 12329872 2876699..2877763 1 NC_017341.1 involved in polysaccharide intercellular adhesin (PIA) synthesis/biofilm formation-like protein; intercellular adhesion protein icaC 2877763 icaC 12329872 icaC Staphylococcus aureus subsp. aureus str. JKD6008 intercellular adhesion protein icaC YP_005746035.1 2876699 D 546342 CDS YP_005746036.1 384863316 12329873 complement(2878155..2880200) 1 NC_017341.1 triacylglycerol lipase 2880200 lip 12329873 lip Staphylococcus aureus subsp. aureus str. JKD6008 triacylglycerol lipase YP_005746036.1 2878155 R 546342 CDS YP_005746037.1 384863317 12329874 complement(2880950..2881096) 1 NC_017341.1 hypothetical protein 2881096 12329874 SAA6008_02730 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005746037.1 2880950 R 546342 CDS YP_005746038.1 384863318 12329875 complement(2881288..2881920) 1 NC_017341.1 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase 2881920 hisI 12329875 hisI Staphylococcus aureus subsp. aureus str. JKD6008 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase YP_005746038.1 2881288 R 546342 CDS YP_005746039.1 384863319 12329876 complement(2881917..2882675) 1 NC_017341.1 imidazole glycerol phosphate synthase subunit HisF 2882675 hisF 12329876 hisF Staphylococcus aureus subsp. aureus str. JKD6008 imidazole glycerol phosphate synthase subunit HisF YP_005746039.1 2881917 R 546342 CDS YP_005746040.1 384863320 12329877 complement(2882672..2883376) 1 NC_017341.1 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 2883376 hisA 12329877 hisA Staphylococcus aureus subsp. aureus str. JKD6008 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_005746040.1 2882672 R 546342 CDS YP_005746041.1 384863321 12329878 complement(2883369..2883947) 1 NC_017341.1 imidazole glycerol phosphate synthase subunit HisH 2883947 hisH 12329878 hisH Staphylococcus aureus subsp. aureus str. JKD6008 imidazole glycerol phosphate synthase subunit HisH YP_005746041.1 2883369 R 546342 CDS YP_005746042.1 384863322 12329879 complement(2883944..2884522) 1 NC_017341.1 putative imidazoleglycerol-phosphate dehydratase 2884522 hisB 12329879 hisB Staphylococcus aureus subsp. aureus str. JKD6008 putative imidazoleglycerol-phosphate dehydratase YP_005746042.1 2883944 R 546342 CDS YP_005746043.1 384863323 12329880 complement(2884491..2885504) 1 NC_017341.1 PFAM: aminotransferase class I and II KEGG: sav:SAV2677 histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase 2885504 hisC 12329880 hisC Staphylococcus aureus subsp. aureus str. JKD6008 histidinol-phosphate aminotransferase YP_005746043.1 2884491 R 546342 CDS YP_005746044.1 384863324 12329881 complement(2885520..2886770) 1 NC_017341.1 putative histidinol dehydrogenase 2886770 hisD 12329881 hisD Staphylococcus aureus subsp. aureus str. JKD6008 putative histidinol dehydrogenase YP_005746044.1 2885520 R 546342 CDS YP_005746045.1 384863325 12329882 complement(2886763..2887377) 1 NC_017341.1 ATP phosphoribosyltransferase catalytic subunit 2887377 hisG 12329882 hisG Staphylococcus aureus subsp. aureus str. JKD6008 ATP phosphoribosyltransferase catalytic subunit YP_005746045.1 2886763 R 546342 CDS YP_005746046.1 384863326 12329883 complement(2887395..2888213) 1 NC_017341.1 may allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase regulatory subunit 2888213 hisZ 12329883 hisZ Staphylococcus aureus subsp. aureus str. JKD6008 ATP phosphoribosyltransferase regulatory subunit YP_005746046.1 2887395 R 546342 CDS YP_005746047.1 384863327 12329884 complement(2888517..2889641) 1 NC_017341.1 polysaccharide deacetylase 2889641 12329884 SAA6008_02740 Staphylococcus aureus subsp. aureus str. JKD6008 polysaccharide deacetylase YP_005746047.1 2888517 R 546342 CDS YP_005746048.1 384863328 12329885 complement(2889759..2890256) 1 NC_017341.1 hypothetical protein 2890256 12329885 SAA6008_02741 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005746048.1 2889759 R 546342 CDS YP_005746049.1 384863329 12329886 complement(2890303..2891136) 1 NC_017341.1 cobalt (Co2+) ABC superfamily ATP binding cassette transporter, membrane protein 2891136 12329886 SAA6008_02742 Staphylococcus aureus subsp. aureus str. JKD6008 cobalt (Co2+) ABC superfamily ATP binding cassette transporter, membrane protein YP_005746049.1 2890303 R 546342 CDS YP_005746050.1 384863330 12329887 complement(2891133..2892845) 1 NC_017341.1 PFAM: ABC transporter related SMART: AAA ATPase KEGG: sac:SACOL2708 ABC transporter, ATP-binding protein; cobalt ABC transporter ATPase 2892845 12329887 SAA6008_02743 Staphylococcus aureus subsp. aureus str. JKD6008 cobalt ABC transporter ATPase YP_005746050.1 2891133 R 546342 CDS YP_005746051.1 384863331 12329888 complement(2892898..2893452) 1 NC_017341.1 PFAM: protein of unknown function DUF1393 KEGG: sav:SAV2685 similar to integral membrane protein, Annotated as Substrate-specific component MtsA of methionine-regulated ECF transporter in Saa_2981; hypothetical protein 2893452 12329888 SAA6008_02744 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005746051.1 2892898 R 546342 CDS YP_005746052.1 384863332 12329889 complement(2893481..2894329) 1 NC_017341.1 S-adenosyl-l-methionine hydroxide adenosyltransferase 2894329 12329889 SAA6008_02745 Staphylococcus aureus subsp. aureus str. JKD6008 S-adenosyl-l-methionine hydroxide adenosyltransferase YP_005746052.1 2893481 R 546342 CDS YP_005746053.1 384863333 12329890 2894711..2895226 1 NC_017341.1 base-induced perplasmic lipid-binding protein 2895226 yceI 12329890 yceI Staphylococcus aureus subsp. aureus str. JKD6008 base-induced perplasmic lipid-binding protein YP_005746053.1 2894711 D 546342 CDS YP_005746054.1 384863334 12329891 complement(2895372..2896388) 1 NC_017341.1 SMP-30/Gluconolaconase/LRE domain-containing protein 2896388 drp35 12329891 drp35 Staphylococcus aureus subsp. aureus str. JKD6008 SMP-30/Gluconolaconase/LRE domain-containing protein YP_005746054.1 2895372 R 546342 CDS YP_005746055.1 384863335 12329892 2896587..2897543 1 NC_017341.1 rhodanese domain sulfurtransferase 2897543 12329892 SAA6008_02748 Staphylococcus aureus subsp. aureus str. JKD6008 rhodanese domain sulfurtransferase YP_005746055.1 2896587 D 546342 CDS YP_005746056.1 384863336 12329893 2897696..2898334 1 NC_017341.1 C15 family pyroglutamyl-peptidase I 2898334 pcp 12329893 pcp Staphylococcus aureus subsp. aureus str. JKD6008 C15 family pyroglutamyl-peptidase I YP_005746056.1 2897696 D 546342 CDS YP_005746057.1 384863337 12329894 2898437..2898901 1 NC_017341.1 hypothetical protein 2898901 12329894 SAA6008_02750 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005746057.1 2898437 D 546342 CDS YP_005746058.1 384863338 12329895 complement(2899062..2901455) 1 NC_017341.1 collagen adhesin 2901455 12329895 SAA6008_02751 Staphylococcus aureus subsp. aureus str. JKD6008 collagen adhesin YP_005746058.1 2899062 R 546342 CDS YP_005746059.1 384863339 12329896 2901869..2903287 1 NC_017341.1 sodium:sulfate symporter family protein 2903287 12329896 SAA6008_02752 Staphylococcus aureus subsp. aureus str. JKD6008 sodium:sulfate symporter family protein YP_005746059.1 2901869 D 546342 CDS YP_005746060.1 384863340 12329897 complement(2903836..2904744) 1 NC_017341.1 DMT superfamily drug/metabolite transporter 2904744 rarD 12329897 rarD Staphylococcus aureus subsp. aureus str. JKD6008 DMT superfamily drug/metabolite transporter YP_005746060.1 2903836 R 546342 CDS YP_005746061.1 384863341 12329898 2904966..2905541 1 NC_017341.1 hypothetical protein 2905541 12329898 SAA6008_02754 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005746061.1 2904966 D 546342 CDS YP_005746062.1 384863342 12329899 2905668..2906720 1 NC_017341.1 NiCoT family nickel (Ni2+)-cobalt (Co2+) transporter 2906720 nixA 12329899 nixA Staphylococcus aureus subsp. aureus str. JKD6008 NiCoT family nickel (Ni2+)-cobalt (Co2+) transporter YP_005746062.1 2905668 D 546342 CDS YP_005746063.1 384863343 12329900 2906962..2907762 1 NC_017341.1 PFAM: N-acetyltransferase KEGG: sav:SAV2699 similar to N-hydroxyarylamine O-acetyltransferase; N-hydroxyarylamine O-acetyltransferase 2907762 12329900 SAA6008_02756 Staphylococcus aureus subsp. aureus str. JKD6008 N-hydroxyarylamine O-acetyltransferase YP_005746063.1 2906962 D 546342 CDS YP_005746064.1 384863344 12329901 complement(2908064..2908576) 1 NC_017341.1 hypothetical protein 2908576 hdeD 12329901 hdeD Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005746064.1 2908064 R 546342 CDS YP_005746065.1 384863345 12329902 2908866..2909624 1 NC_017341.1 SalX, ABC-type antimicrobial peptide transport system, involved in vancomycin resistance 2909624 vraD 12329902 vraD Staphylococcus aureus subsp. aureus str. JKD6008 SalX, ABC-type antimicrobial peptide transport system, involved in vancomycin resistance YP_005746065.1 2908866 D 546342 CDS YP_005746066.1 384863346 12329903 2909614..2911494 1 NC_017341.1 ABC transporter permease protein, involved in vancomycin resistance 2911494 vraE 12329903 vraE Staphylococcus aureus subsp. aureus str. JKD6008 ABC transporter permease protein, involved in vancomycin resistance YP_005746066.1 2909614 D 546342 CDS YP_005746067.1 384863347 12329904 2911586..2911777 1 NC_017341.1 follows the vraDE vancomycin resistance locus; hypothetical protein 2911777 12329904 SAA6008_02760 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005746067.1 2911586 D 546342 CDS YP_005746068.1 384863348 12329905 2912581..2912796 1 NC_017341.1 integrase 2912796 12329905 SAA6008_02761 Staphylococcus aureus subsp. aureus str. JKD6008 integrase YP_005746068.1 2912581 D 546342 CDS YP_005746069.1 384863349 12329906 complement(2912864..2913361) 1 NC_017341.1 hypothetical protein 2913361 12329906 SAA6008_02762 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005746069.1 2912864 R 546342 CDS YP_005746070.1 384863350 12329907 complement(2913363..2914037) 1 NC_017341.1 hypothetical protein 2914037 12329907 SAA6008_02763 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005746070.1 2913363 R 546342 CDS YP_005746071.1 384863351 12329908 complement(2914131..2914934) 1 NC_017341.1 subtilase family protease 2914934 12329908 SAA6008_02764 Staphylococcus aureus subsp. aureus str. JKD6008 subtilase family protease YP_005746071.1 2914131 R 546342 CDS YP_005746072.1 384863352 12329909 2915022..2915162 1 NC_017341.1 hypothetical protein 2915162 12329909 SAA6008_02765 Staphylococcus aureus subsp. aureus str. JKD6008 hypothetical protein YP_005746072.1 2915022 D 546342 CDS YP_005746073.1 384863353 12329910 2915418..2915618 1 NC_017341.1 cold-shock protein 2915618 12329910 SAA6008_02766 Staphylococcus aureus subsp. aureus str. JKD6008 cold-shock protein YP_005746073.1 2915418 D 546342 CDS YP_005746074.1 384863354 12329911 complement(2915745..2916314) 1 NC_017341.1 Cro/CI family transcriptional regulator 2916314 12329911 SAA6008_02767 Staphylococcus aureus subsp. aureus str. JKD6008 Cro/CI family transcriptional regulator YP_005746074.1 2915745 R 546342 CDS YP_005746075.1 384863355 12329912 complement(2916567..2916962) 1 NC_017341.1 membrane protein 2916962 12329912 SAA6008_02768 Staphylococcus aureus subsp. aureus str. JKD6008 membrane protein YP_005746075.1 2916567 R 546342 CDS YP_005746076.1 384863356 12329913 complement(2917030..2917383) 1 NC_017341.1 membrane protein 2917383 12329913 SAA6008_02769 Staphylococcus aureus subsp. aureus str. JKD6008 membrane protein YP_005746076.1 2917030 R 546342 CDS YP_005746077.1 384863357 12329914 complement(2917936..2918775) 1 NC_017341.1 ParB family nucleoid occlusion protein, Noc 2918775 noc 12329914 noc Staphylococcus aureus subsp. aureus str. JKD6008 ParB family nucleoid occlusion protein, Noc YP_005746077.1 2917936 R 546342 CDS YP_005746078.1 384863358 12329915 complement(2918818..2919537) 1 NC_017341.1 glucose inhibited division protein B 2919537 gidB 12329915 gidB Staphylococcus aureus subsp. aureus str. JKD6008 glucose inhibited division protein B YP_005746078.1 2918818 R 546342 CDS YP_005746079.1 384863359 12329916 complement(2919537..2921414) 1 NC_017341.1 glucose inhibited division protein A 2921414 gidA 12329916 gidA Staphylococcus aureus subsp. aureus str. JKD6008 glucose inhibited division protein A YP_005746079.1 2919537 R 546342 CDS YP_005746080.1 384863360 12329917 complement(2921481..2922860) 1 NC_017341.1 tRNA modification GTPase TrmE 2922860 trmE 12329917 trmE Staphylococcus aureus subsp. aureus str. JKD6008 tRNA modification GTPase TrmE YP_005746080.1 2921481 R 546342 CDS YP_005746081.1 384863361 12329918 complement(2923004..2923357) 1 NC_017341.1 ribonuclease P 2923357 rnpA 12329918 rnpA Staphylococcus aureus subsp. aureus str. JKD6008 ribonuclease P YP_005746081.1 2923004 R 546342 CDS YP_005746082.1 384863362 12329919 complement(2923477..2923614) 1 NC_017341.1 50S ribosomal protein L34 2923614 rpmH 12329919 rpmH Staphylococcus aureus subsp. aureus str. JKD6008 50S ribosomal protein L34 YP_005746082.1 2923477 R 546342 CDS